##gff-version 3
#!gff-spec-version 1.21
#!processor NCBI annotwriter
#!genome-build ASM1757115v1
#!genome-build-accession NCBI_Assembly:GCA_017571155.1
#!annotation-date 03/18/2021 19:27:14
#!annotation-source NCBI 
##sequence-region JAGETS010000001.1 1 226782
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=587
JAGETS010000001.1	Genbank	region	1	226782	.	+	.	ID=JAGETS010000001.1:1..226782;Dbxref=taxon:587;collected-by=NHLS;collection-date=2018;country=South Africa: Pretoria;gbkey=Src;isolation-source=stool;lat-lon=25.7479 S 28.2293 E;mol_type=genomic DNA;nat-host=porcine;strain=SG003
JAGETS010000001.1	Genbank	pseudogene	1	510	.	+	.	ID=gene-J4731_00005;Name=J4731_00005;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_00005;pseudo=true
JAGETS010000001.1	Protein Homology	CDS	1	510	.	+	1	ID=cds-J4731_00005;Parent=gene-J4731_00005;Note=frameshifted%3B internal stop%3B incomplete%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014658161.1;locus_tag=J4731_00005;product=hypothetical protein;pseudo=true;transl_table=11
JAGETS010000001.1	Genbank	pseudogene	576	1014	.	-	.	ID=gene-J4731_00010;Name=J4731_00010;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_00010;pseudo=true
JAGETS010000001.1	Protein Homology	CDS	576	1014	.	-	0	ID=cds-J4731_00010;Parent=gene-J4731_00010;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004255247.1;locus_tag=J4731_00010;product=nucleoside deaminase;pseudo=true;transl_table=11
JAGETS010000001.1	Genbank	pseudogene	2326	2956	.	-	.	ID=gene-J4731_00015;Name=J4731_00015;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_00015;pseudo=true
JAGETS010000001.1	Protein Homology	CDS	2326	2956	.	-	0	ID=cds-J4731_00015;Parent=gene-J4731_00015;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004258015.1;locus_tag=J4731_00015;product=molecular chaperone;pseudo=true;transl_table=11
JAGETS010000001.1	Genbank	pseudogene	2949	3464	.	-	.	ID=gene-J4731_00020;Name=J4731_00020;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_00020;pseudo=true
JAGETS010000001.1	Protein Homology	CDS	2949	3464	.	-	0	ID=cds-J4731_00020;Parent=gene-J4731_00020;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004258018.1;locus_tag=J4731_00020;product=type 1 fimbrial protein;pseudo=true;transl_table=11
JAGETS010000001.1	Genbank	pseudogene	3457	4715	.	-	.	ID=gene-J4731_00025;Name=J4731_00025;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_00025;pseudo=true
JAGETS010000001.1	Protein Homology	CDS	3457	4715	.	-	0	ID=cds-J4731_00025;Parent=gene-J4731_00025;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001206290.1;locus_tag=J4731_00025;product=IS4-like element ISVsa5 family transposase;pseudo=true;transl_table=11
JAGETS010000001.1	Genbank	pseudogene	5313	7465	.	-	.	ID=gene-J4731_00030;Name=J4731_00030;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_00030;pseudo=true
JAGETS010000001.1	Protein Homology	CDS	5313	7465	.	-	0	ID=cds-J4731_00030;Parent=gene-J4731_00030;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006663495.1;locus_tag=J4731_00030;product=fimbrial biogenesis outer membrane usher protein;pseudo=true;transl_table=11
JAGETS010000001.1	Genbank	pseudogene	7771	8466	.	-	.	ID=gene-J4731_00035;Name=J4731_00035;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_00035;pseudo=true
JAGETS010000001.1	Protein Homology	CDS	7771	8466	.	-	0	ID=cds-J4731_00035;Parent=gene-J4731_00035;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006663494.1;locus_tag=J4731_00035;product=molecular chaperone;pseudo=true;transl_table=11
JAGETS010000001.1	Genbank	gene	8532	9092	.	-	.	ID=gene-J4731_00040;Name=J4731_00040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_00040
JAGETS010000001.1	Protein Homology	CDS	8532	9092	.	-	0	ID=cds-MBO1928517.1;Parent=gene-J4731_00040;Dbxref=NCBI_GP:MBO1928517.1;Name=MBO1928517.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006663493.1;locus_tag=J4731_00040;product=fimbrial protein;protein_id=MBO1928517.1;transl_table=11
JAGETS010000001.1	Genbank	pseudogene	9194	9446	.	-	.	ID=gene-J4731_00045;Name=J4731_00045;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_00045;pseudo=true
JAGETS010000001.1	Protein Homology	CDS	9194	9446	.	-	0	ID=cds-J4731_00045;Parent=gene-J4731_00045;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004258030.1;locus_tag=J4731_00045;product=helix-turn-helix transcriptional regulator;pseudo=true;transl_table=11
JAGETS010000001.1	Genbank	gene	10826	11035	.	-	.	ID=gene-J4731_00050;Name=J4731_00050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_00050
JAGETS010000001.1	GeneMarkS-2+	CDS	10826	11035	.	-	0	ID=cds-MBO1928518.1;Parent=gene-J4731_00050;Dbxref=NCBI_GP:MBO1928518.1;Name=MBO1928518.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_00050;product=hypothetical protein;protein_id=MBO1928518.1;transl_table=11
JAGETS010000001.1	Genbank	gene	11251	11442	.	-	.	ID=gene-J4731_00055;Name=J4731_00055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_00055
JAGETS010000001.1	Protein Homology	CDS	11251	11442	.	-	0	ID=cds-MBO1928519.1;Parent=gene-J4731_00055;Dbxref=NCBI_GP:MBO1928519.1;Name=MBO1928519.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017315.1;locus_tag=J4731_00055;product=PAAR domain-containing protein;protein_id=MBO1928519.1;transl_table=11
JAGETS010000001.1	Genbank	pseudogene	11436	12083	.	-	.	ID=gene-J4731_00060;Name=J4731_00060;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_00060;pseudo=true
JAGETS010000001.1	Protein Homology	CDS	11436	12083	.	-	0	ID=cds-J4731_00060;Parent=gene-J4731_00060;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012367455.1;locus_tag=J4731_00060;product=hypothetical protein;pseudo=true;transl_table=11
JAGETS010000001.1	Genbank	pseudogene	12167	12393	.	-	.	ID=gene-J4731_00065;Name=J4731_00065;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_00065;pseudo=true
JAGETS010000001.1	Protein Homology	CDS	12167	12393	.	-	0	ID=cds-J4731_00065;Parent=gene-J4731_00065;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004259736.1;locus_tag=J4731_00065;product=hypothetical protein;pseudo=true;transl_table=11
JAGETS010000001.1	Genbank	pseudogene	12390	12800	.	-	.	ID=gene-J4731_00070;Name=J4731_00070;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_00070;pseudo=true
JAGETS010000001.1	Protein Homology	CDS	12390	12800	.	-	0	ID=cds-J4731_00070;Parent=gene-J4731_00070;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004258057.1;locus_tag=J4731_00070;product=hypothetical protein;pseudo=true;transl_table=11
JAGETS010000001.1	Genbank	pseudogene	12878	13146	.	-	.	ID=gene-J4731_00075;Name=J4731_00075;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_00075;pseudo=true
JAGETS010000001.1	Protein Homology	CDS	12878	13146	.	-	0	ID=cds-J4731_00075;Parent=gene-J4731_00075;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015731055.1;locus_tag=J4731_00075;product=PAAR domain-containing protein;pseudo=true;transl_table=11
JAGETS010000001.1	Genbank	gene	13713	13949	.	-	.	ID=gene-J4731_00080;Name=J4731_00080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_00080
JAGETS010000001.1	GeneMarkS-2+	CDS	13713	13949	.	-	0	ID=cds-MBO1928520.1;Parent=gene-J4731_00080;Dbxref=NCBI_GP:MBO1928520.1;Name=MBO1928520.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_00080;product=hypothetical protein;protein_id=MBO1928520.1;transl_table=11
JAGETS010000001.1	Genbank	gene	13952	14143	.	-	.	ID=gene-J4731_00085;Name=J4731_00085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_00085
JAGETS010000001.1	GeneMarkS-2+	CDS	13952	14143	.	-	0	ID=cds-MBO1928521.1;Parent=gene-J4731_00085;Dbxref=NCBI_GP:MBO1928521.1;Name=MBO1928521.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_00085;product=hypothetical protein;protein_id=MBO1928521.1;transl_table=11
JAGETS010000001.1	Genbank	gene	14545	14805	.	-	.	ID=gene-J4731_00090;Name=J4731_00090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_00090
JAGETS010000001.1	GeneMarkS-2+	CDS	14545	14805	.	-	0	ID=cds-MBO1928522.1;Parent=gene-J4731_00090;Dbxref=NCBI_GP:MBO1928522.1;Name=MBO1928522.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_00090;product=hypothetical protein;protein_id=MBO1928522.1;transl_table=11
JAGETS010000001.1	Genbank	gene	15180	15791	.	-	.	ID=gene-J4731_00095;Name=J4731_00095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_00095
JAGETS010000001.1	GeneMarkS-2+	CDS	15180	15791	.	-	0	ID=cds-MBO1928523.1;Parent=gene-J4731_00095;Dbxref=NCBI_GP:MBO1928523.1;Name=MBO1928523.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_00095;product=hypothetical protein;protein_id=MBO1928523.1;transl_table=11
JAGETS010000001.1	Genbank	gene	15826	16008	.	-	.	ID=gene-J4731_00100;Name=J4731_00100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_00100
JAGETS010000001.1	GeneMarkS-2+	CDS	15826	16008	.	-	0	ID=cds-MBO1928524.1;Parent=gene-J4731_00100;Dbxref=NCBI_GP:MBO1928524.1;Name=MBO1928524.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_00100;product=hypothetical protein;protein_id=MBO1928524.1;transl_table=11
JAGETS010000001.1	Genbank	gene	16239	16523	.	-	.	ID=gene-J4731_00105;Name=J4731_00105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_00105
JAGETS010000001.1	Protein Homology	CDS	16239	16523	.	-	0	ID=cds-MBO1928525.1;Parent=gene-J4731_00105;Dbxref=NCBI_GP:MBO1928525.1;Name=MBO1928525.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024894.1;locus_tag=J4731_00105;product=DUF4123 domain-containing protein;protein_id=MBO1928525.1;transl_table=11
JAGETS010000001.1	Genbank	gene	16457	16720	.	-	.	ID=gene-J4731_00110;Name=J4731_00110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_00110
JAGETS010000001.1	Protein Homology	CDS	16457	16720	.	-	0	ID=cds-MBO1928526.1;Parent=gene-J4731_00110;Dbxref=NCBI_GP:MBO1928526.1;Name=MBO1928526.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024894.1;locus_tag=J4731_00110;product=DUF4123 domain-containing protein;protein_id=MBO1928526.1;transl_table=11
JAGETS010000001.1	Genbank	pseudogene	16713	18811	.	-	.	ID=gene-J4731_00115;Name=tssI;gbkey=Gene;gene=tssI;gene_biotype=pseudogene;locus_tag=J4731_00115;pseudo=true
JAGETS010000001.1	Protein Homology	CDS	16713	18811	.	-	0	ID=cds-J4731_00115;Parent=gene-J4731_00115;Note=frameshifted;gbkey=CDS;gene=tssI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004250010.1;locus_tag=J4731_00115;product=type VI secretion system tip protein VgrG;pseudo=true;transl_table=11
JAGETS010000001.1	Genbank	gene	18880	19398	.	-	.	ID=gene-J4731_00120;Name=J4731_00120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_00120
JAGETS010000001.1	Protein Homology	CDS	18880	19398	.	-	0	ID=cds-MBO1928527.1;Parent=gene-J4731_00120;Dbxref=NCBI_GP:MBO1928527.1;Name=MBO1928527.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006688108.1;locus_tag=J4731_00120;product=Hcp family type VI secretion system effector;protein_id=MBO1928527.1;transl_table=11
JAGETS010000001.1	Genbank	gene	20282	20446	.	-	.	ID=gene-J4731_00125;Name=J4731_00125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_00125
JAGETS010000001.1	GeneMarkS-2+	CDS	20282	20446	.	-	0	ID=cds-MBO1928528.1;Parent=gene-J4731_00125;Dbxref=NCBI_GP:MBO1928528.1;Name=MBO1928528.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_00125;product=hypothetical protein;protein_id=MBO1928528.1;transl_table=11
JAGETS010000001.1	Genbank	gene	20890	21243	.	-	.	ID=gene-J4731_00130;Name=J4731_00130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_00130
JAGETS010000001.1	GeneMarkS-2+	CDS	20890	21243	.	-	0	ID=cds-MBO1928529.1;Parent=gene-J4731_00130;Dbxref=NCBI_GP:MBO1928529.1;Name=MBO1928529.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_00130;product=hypothetical protein;protein_id=MBO1928529.1;transl_table=11
JAGETS010000001.1	Genbank	pseudogene	21296	22229	.	-	.	ID=gene-J4731_00135;Name=J4731_00135;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_00135;pseudo=true
JAGETS010000001.1	Protein Homology	CDS	21296	22229	.	-	0	ID=cds-J4731_00135;Parent=gene-J4731_00135;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017894106.1;locus_tag=J4731_00135;product=tyrosine-type recombinase/integrase;pseudo=true;transl_table=11
JAGETS010000001.1	Genbank	gene	22447	22749	.	-	.	ID=gene-J4731_00140;Name=J4731_00140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_00140
JAGETS010000001.1	GeneMarkS-2+	CDS	22447	22749	.	-	0	ID=cds-MBO1928530.1;Parent=gene-J4731_00140;Dbxref=NCBI_GP:MBO1928530.1;Name=MBO1928530.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_00140;product=hypothetical protein;protein_id=MBO1928530.1;transl_table=11
JAGETS010000001.1	Genbank	pseudogene	22949	23426	.	-	.	ID=gene-J4731_00145;Name=J4731_00145;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_00145;pseudo=true
JAGETS010000001.1	Protein Homology	CDS	22949	23426	.	-	0	ID=cds-J4731_00145;Parent=gene-J4731_00145;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001383916.1;locus_tag=J4731_00145;product=helix-turn-helix domain-containing protein;pseudo=true;transl_table=11
JAGETS010000001.1	Genbank	pseudogene	23678	23853	.	+	.	ID=gene-J4731_00150;Name=J4731_00150;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_00150;pseudo=true
JAGETS010000001.1	Protein Homology	CDS	23678	23853	.	+	0	ID=cds-J4731_00150;Parent=gene-J4731_00150;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000188449.1;locus_tag=J4731_00150;product=regulator;pseudo=true;transl_table=11
JAGETS010000001.1	Genbank	pseudogene	23927	24439	.	+	.	ID=gene-J4731_00155;Name=J4731_00155;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_00155;pseudo=true
JAGETS010000001.1	Protein Homology	CDS	23927	24439	.	+	0	ID=cds-J4731_00155;Parent=gene-J4731_00155;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012987547.1;locus_tag=J4731_00155;product=phage regulatory CII family protein;pseudo=true;transl_table=11
JAGETS010000001.1	Genbank	pseudogene	24620	24909	.	+	.	ID=gene-J4731_00160;Name=J4731_00160;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_00160;pseudo=true
JAGETS010000001.1	Protein Homology	CDS	24620	24909	.	+	0	ID=cds-J4731_00160;Parent=gene-J4731_00160;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006813461.1;locus_tag=J4731_00160;product=DUF5347 domain-containing protein;pseudo=true;transl_table=11
JAGETS010000001.1	Genbank	pseudogene	25058	25244	.	+	.	ID=gene-J4731_00165;Name=J4731_00165;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_00165;pseudo=true
JAGETS010000001.1	Protein Homology	CDS	25058	25244	.	+	0	ID=cds-J4731_00165;Parent=gene-J4731_00165;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004254744.1;locus_tag=J4731_00165;product=DUF2732 family protein;pseudo=true;transl_table=11
JAGETS010000001.1	Genbank	gene	25241	25525	.	+	.	ID=gene-J4731_00170;Name=J4731_00170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_00170
JAGETS010000001.1	GeneMarkS-2+	CDS	25241	25525	.	+	0	ID=cds-MBO1928531.1;Parent=gene-J4731_00170;Dbxref=NCBI_GP:MBO1928531.1;Name=MBO1928531.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_00170;product=hypothetical protein;protein_id=MBO1928531.1;transl_table=11
JAGETS010000001.1	Genbank	gene	25897	26052	.	+	.	ID=gene-J4731_00175;Name=J4731_00175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_00175
JAGETS010000001.1	Protein Homology	CDS	25897	26052	.	+	0	ID=cds-MBO1928532.1;Parent=gene-J4731_00175;Dbxref=NCBI_GP:MBO1928532.1;Name=MBO1928532.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017640.1;locus_tag=J4731_00175;product=replication endonuclease;protein_id=MBO1928532.1;transl_table=11
JAGETS010000001.1	Genbank	gene	26164	26580	.	+	.	ID=gene-J4731_00180;Name=J4731_00180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_00180
JAGETS010000001.1	Protein Homology	CDS	26164	26580	.	+	0	ID=cds-MBO1928533.1;Parent=gene-J4731_00180;Dbxref=NCBI_GP:MBO1928533.1;Name=MBO1928533.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017640.1;locus_tag=J4731_00180;product=replication endonuclease;protein_id=MBO1928533.1;transl_table=11
JAGETS010000001.1	Genbank	gene	26573	26848	.	+	.	ID=gene-J4731_00185;Name=J4731_00185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_00185
JAGETS010000001.1	GeneMarkS-2+	CDS	26573	26848	.	+	0	ID=cds-MBO1928534.1;Parent=gene-J4731_00185;Dbxref=NCBI_GP:MBO1928534.1;Name=MBO1928534.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_00185;product=hypothetical protein;protein_id=MBO1928534.1;transl_table=11
JAGETS010000001.1	Genbank	gene	27332	27586	.	-	.	ID=gene-J4731_00190;Name=J4731_00190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_00190
JAGETS010000001.1	GeneMarkS-2+	CDS	27332	27586	.	-	0	ID=cds-MBO1928535.1;Parent=gene-J4731_00190;Dbxref=NCBI_GP:MBO1928535.1;Name=MBO1928535.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_00190;product=hypothetical protein;protein_id=MBO1928535.1;transl_table=11
JAGETS010000001.1	Genbank	gene	27639	27818	.	-	.	ID=gene-J4731_00195;Name=J4731_00195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_00195
JAGETS010000001.1	GeneMarkS-2+	CDS	27639	27818	.	-	0	ID=cds-MBO1928536.1;Parent=gene-J4731_00195;Dbxref=NCBI_GP:MBO1928536.1;Name=MBO1928536.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_00195;product=hypothetical protein;protein_id=MBO1928536.1;transl_table=11
JAGETS010000001.1	Genbank	gene	28597	28779	.	+	.	ID=gene-J4731_00200;Name=J4731_00200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_00200
JAGETS010000001.1	GeneMarkS-2+	CDS	28597	28779	.	+	0	ID=cds-MBO1928537.1;Parent=gene-J4731_00200;Dbxref=NCBI_GP:MBO1928537.1;Name=MBO1928537.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_00200;product=hypothetical protein;protein_id=MBO1928537.1;transl_table=11
JAGETS010000001.1	Genbank	gene	28782	29045	.	-	.	ID=gene-J4731_00205;Name=J4731_00205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_00205
JAGETS010000001.1	Protein Homology	CDS	28782	29045	.	-	0	ID=cds-MBO1928538.1;Parent=gene-J4731_00205;Dbxref=NCBI_GP:MBO1928538.1;Name=MBO1928538.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001264735.1;locus_tag=J4731_00205;product=ogr/Delta-like zinc finger family protein;protein_id=MBO1928538.1;transl_table=11
JAGETS010000001.1	Genbank	pseudogene	29150	30172	.	-	.	ID=gene-J4731_00210;Name=J4731_00210;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_00210;pseudo=true
JAGETS010000001.1	Protein Homology	CDS	29150	30172	.	-	0	ID=cds-J4731_00210;Parent=gene-J4731_00210;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000746494.1;locus_tag=J4731_00210;product=phage portal protein;pseudo=true;transl_table=11
JAGETS010000001.1	Genbank	pseudogene	30165	31927	.	-	.	ID=gene-J4731_00215;Name=J4731_00215;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_00215;pseudo=true
JAGETS010000001.1	Protein Homology	CDS	30165	31927	.	-	0	ID=cds-J4731_00215;Parent=gene-J4731_00215;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001151950.1;locus_tag=J4731_00215;product=terminase family protein;pseudo=true;transl_table=11
JAGETS010000001.1	Genbank	pseudogene	32075	32808	.	+	.	ID=gene-J4731_00220;Name=J4731_00220;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_00220;pseudo=true
JAGETS010000001.1	Protein Homology	CDS	32075	32808	.	+	0	ID=cds-J4731_00220;Parent=gene-J4731_00220;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010847095.1;locus_tag=J4731_00220;product=GPO family capsid scaffolding protein;pseudo=true;transl_table=11
JAGETS010000001.1	Genbank	pseudogene	32874	33897	.	+	.	ID=gene-J4731_00225;Name=J4731_00225;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_00225;pseudo=true
JAGETS010000001.1	Protein Homology	CDS	32874	33897	.	+	0	ID=cds-J4731_00225;Parent=gene-J4731_00225;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010847096.1;locus_tag=J4731_00225;product=phage major capsid protein%2C P2 family;pseudo=true;transl_table=11
JAGETS010000001.1	Genbank	pseudogene	33897	34593	.	+	.	ID=gene-J4731_00230;Name=J4731_00230;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_00230;pseudo=true
JAGETS010000001.1	Protein Homology	CDS	33897	34593	.	+	0	ID=cds-J4731_00230;Parent=gene-J4731_00230;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012987560.1;locus_tag=J4731_00230;product=terminase;pseudo=true;transl_table=11
JAGETS010000001.1	Genbank	pseudogene	34689	35139	.	+	.	ID=gene-J4731_00235;Name=J4731_00235;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_00235;pseudo=true
JAGETS010000001.1	Protein Homology	CDS	34689	35139	.	+	0	ID=cds-J4731_00235;Parent=gene-J4731_00235;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001738723.1;locus_tag=J4731_00235;product=head completion/stabilization protein;pseudo=true;transl_table=11
JAGETS010000001.1	Genbank	gene	35198	35503	.	+	.	ID=gene-J4731_00240;Name=J4731_00240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_00240
JAGETS010000001.1	Protein Homology	CDS	35198	35503	.	+	0	ID=cds-MBO1928539.1;Parent=gene-J4731_00240;Dbxref=NCBI_GP:MBO1928539.1;Name=MBO1928539.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018586.1;locus_tag=J4731_00240;product=phage tail protein;protein_id=MBO1928539.1;transl_table=11
JAGETS010000001.1	Genbank	pseudogene	35598	36246	.	+	.	ID=gene-J4731_00245;Name=J4731_00245;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_00245;pseudo=true
JAGETS010000001.1	Protein Homology	CDS	35598	36246	.	+	0	ID=cds-J4731_00245;Parent=gene-J4731_00245;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010847100.1;locus_tag=J4731_00245;product=hypothetical protein;pseudo=true;transl_table=11
JAGETS010000001.1	Genbank	pseudogene	36279	37377	.	+	.	ID=gene-J4731_00250;Name=J4731_00250;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_00250;pseudo=true
JAGETS010000001.1	Protein Homology	CDS	36279	37377	.	+	0	ID=cds-J4731_00250;Parent=gene-J4731_00250;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006819221.1;locus_tag=J4731_00250;product=DUF2586 family protein;pseudo=true;transl_table=11
JAGETS010000001.1	Genbank	pseudogene	37370	37814	.	+	.	ID=gene-J4731_00255;Name=J4731_00255;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_00255;pseudo=true
JAGETS010000001.1	Protein Homology	CDS	37370	37814	.	+	0	ID=cds-J4731_00255;Parent=gene-J4731_00255;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000044254.1;locus_tag=J4731_00255;product=DUF2597 family protein;pseudo=true;transl_table=11
JAGETS010000001.1	Genbank	gene	37829	38119	.	+	.	ID=gene-J4731_00260;Name=J4731_00260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_00260
JAGETS010000001.1	Protein Homology	CDS	37829	38119	.	+	0	ID=cds-MBO1928540.1;Parent=gene-J4731_00260;Dbxref=NCBI_GP:MBO1928540.1;Name=MBO1928540.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001155238.1;locus_tag=J4731_00260;product=phage holin family protein;protein_id=MBO1928540.1;transl_table=11
JAGETS010000001.1	Genbank	pseudogene	38106	38434	.	+	.	ID=gene-J4731_00265;Name=J4731_00265;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_00265;pseudo=true
JAGETS010000001.1	Protein Homology	CDS	38106	38434	.	+	0	ID=cds-J4731_00265;Parent=gene-J4731_00265;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007710822.1;locus_tag=J4731_00265;product=M15 family metallopeptidase;pseudo=true;transl_table=11
JAGETS010000001.1	Genbank	pseudogene	38434	38828	.	+	.	ID=gene-J4731_00270;Name=J4731_00270;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_00270;pseudo=true
JAGETS010000001.1	Protein Homology	CDS	38434	38828	.	+	0	ID=cds-J4731_00270;Parent=gene-J4731_00270;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006813481.1;locus_tag=J4731_00270;product=hypothetical protein;pseudo=true;transl_table=11
JAGETS010000001.1	Genbank	pseudogene	38921	39195	.	+	.	ID=gene-J4731_00275;Name=J4731_00275;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_00275;pseudo=true
JAGETS010000001.1	Protein Homology	CDS	38921	39195	.	+	0	ID=cds-J4731_00275;Parent=gene-J4731_00275;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012883490.1;locus_tag=J4731_00275;product=putative phage tail assembly chaperone;pseudo=true;transl_table=11
JAGETS010000001.1	Genbank	gene	39215	39373	.	+	.	ID=gene-J4731_00280;Name=J4731_00280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_00280
JAGETS010000001.1	GeneMarkS-2+	CDS	39215	39373	.	+	0	ID=cds-MBO1928541.1;Parent=gene-J4731_00280;Dbxref=NCBI_GP:MBO1928541.1;Name=MBO1928541.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_00280;product=hypothetical protein;protein_id=MBO1928541.1;transl_table=11
JAGETS010000001.1	Genbank	pseudogene	39366	41424	.	+	.	ID=gene-J4731_00285;Name=J4731_00285;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_00285;pseudo=true
JAGETS010000001.1	Protein Homology	CDS	39366	41424	.	+	0	ID=cds-J4731_00285;Parent=gene-J4731_00285;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001738733.1;locus_tag=J4731_00285;product=phage tail tape measure protein;pseudo=true;transl_table=11
JAGETS010000001.1	Genbank	gene	41417	41749	.	+	.	ID=gene-J4731_00290;Name=J4731_00290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_00290
JAGETS010000001.1	Protein Homology	CDS	41417	41749	.	+	0	ID=cds-MBO1928542.1;Parent=gene-J4731_00290;Dbxref=NCBI_GP:MBO1928542.1;Name=MBO1928542.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016537852.1;locus_tag=J4731_00290;product=DUF2590 family protein;protein_id=MBO1928542.1;transl_table=11
JAGETS010000001.1	Genbank	gene	41789	42631	.	+	.	ID=gene-J4731_00295;Name=J4731_00295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_00295
JAGETS010000001.1	Protein Homology	CDS	41789	42631	.	+	0	ID=cds-MBO1928543.1;Parent=gene-J4731_00295;Dbxref=NCBI_GP:MBO1928543.1;Name=MBO1928543.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016736.1;locus_tag=J4731_00295;product=baseplate J/gp47 family protein;protein_id=MBO1928543.1;transl_table=11
JAGETS010000001.1	Genbank	pseudogene	42953	43562	.	+	.	ID=gene-J4731_00300;Name=J4731_00300;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_00300;pseudo=true
JAGETS010000001.1	Protein Homology	CDS	42953	43562	.	+	0	ID=cds-J4731_00300;Parent=gene-J4731_00300;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006624192.1;locus_tag=J4731_00300;product=hypothetical protein;pseudo=true;transl_table=11
JAGETS010000001.1	Genbank	pseudogene	43566	44632	.	+	.	ID=gene-J4731_00305;Name=J4731_00305;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_00305;pseudo=true
JAGETS010000001.1	Protein Homology	CDS	43566	44632	.	+	0	ID=cds-J4731_00305;Parent=gene-J4731_00305;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011148179.1;locus_tag=J4731_00305;product=phage tail protein;pseudo=true;transl_table=11
JAGETS010000001.1	Genbank	gene	44629	44883	.	+	.	ID=gene-J4731_00310;Name=J4731_00310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_00310
JAGETS010000001.1	GeneMarkS-2+	CDS	44629	44883	.	+	0	ID=cds-MBO1928544.1;Parent=gene-J4731_00310;Dbxref=NCBI_GP:MBO1928544.1;Name=MBO1928544.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_00310;product=hypothetical protein;protein_id=MBO1928544.1;transl_table=11
JAGETS010000001.1	Genbank	gene	45148	45444	.	+	.	ID=gene-J4731_00315;Name=J4731_00315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_00315
JAGETS010000001.1	GeneMarkS-2+	CDS	45148	45444	.	+	0	ID=cds-MBO1928545.1;Parent=gene-J4731_00315;Dbxref=NCBI_GP:MBO1928545.1;Name=MBO1928545.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_00315;product=hypothetical protein;protein_id=MBO1928545.1;transl_table=11
JAGETS010000001.1	Genbank	gene	45885	46070	.	+	.	ID=gene-J4731_00320;Name=J4731_00320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_00320
JAGETS010000001.1	GeneMarkS-2+	CDS	45885	46070	.	+	0	ID=cds-MBO1928546.1;Parent=gene-J4731_00320;Dbxref=NCBI_GP:MBO1928546.1;Name=MBO1928546.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_00320;product=hypothetical protein;protein_id=MBO1928546.1;transl_table=11
JAGETS010000001.1	Genbank	gene	46073	46255	.	+	.	ID=gene-J4731_00325;Name=J4731_00325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_00325
JAGETS010000001.1	GeneMarkS-2+	CDS	46073	46255	.	+	0	ID=cds-MBO1928547.1;Parent=gene-J4731_00325;Dbxref=NCBI_GP:MBO1928547.1;Name=MBO1928547.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_00325;product=hypothetical protein;protein_id=MBO1928547.1;transl_table=11
JAGETS010000001.1	Genbank	gene	46273	46422	.	+	.	ID=gene-J4731_00330;Name=J4731_00330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_00330
JAGETS010000001.1	Protein Homology	CDS	46273	46422	.	+	0	ID=cds-MBO1928548.1;Parent=gene-J4731_00330;Dbxref=NCBI_GP:MBO1928548.1;Name=MBO1928548.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015405997.1;locus_tag=J4731_00330;product=tail fiber assembly protein;protein_id=MBO1928548.1;transl_table=11
JAGETS010000001.1	Genbank	pseudogene	46461	47139	.	+	.	ID=gene-J4731_00335;Name=J4731_00335;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_00335;pseudo=true
JAGETS010000001.1	Protein Homology	CDS	46461	47139	.	+	0	ID=cds-J4731_00335;Parent=gene-J4731_00335;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004389576.1;locus_tag=J4731_00335;product=hypothetical protein;pseudo=true;transl_table=11
JAGETS010000001.1	Genbank	pseudogene	47116	47659	.	+	.	ID=gene-J4731_00340;Name=J4731_00340;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_00340;pseudo=true
JAGETS010000001.1	Protein Homology	CDS	47116	47659	.	+	0	ID=cds-J4731_00340;Parent=gene-J4731_00340;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011147675.1;locus_tag=J4731_00340;product=hypothetical protein;pseudo=true;transl_table=11
JAGETS010000001.1	Genbank	pseudogene	47665	49327	.	+	.	ID=gene-J4731_00345;Name=J4731_00345;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_00345;pseudo=true
JAGETS010000001.1	Protein Homology	CDS	47665	49327	.	+	0	ID=cds-J4731_00345;Parent=gene-J4731_00345;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005171191.1;locus_tag=J4731_00345;product=hypothetical protein;pseudo=true;transl_table=11
JAGETS010000001.1	Genbank	gene	49938	50153	.	-	.	ID=gene-J4731_00350;Name=J4731_00350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_00350
JAGETS010000001.1	GeneMarkS-2+	CDS	49938	50153	.	-	0	ID=cds-MBO1928549.1;Parent=gene-J4731_00350;Dbxref=NCBI_GP:MBO1928549.1;Name=MBO1928549.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_00350;product=hypothetical protein;protein_id=MBO1928549.1;transl_table=11
JAGETS010000001.1	Genbank	gene	51132	51293	.	-	.	ID=gene-J4731_00355;Name=J4731_00355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_00355
JAGETS010000001.1	GeneMarkS-2+	CDS	51132	51293	.	-	0	ID=cds-MBO1928550.1;Parent=gene-J4731_00355;Dbxref=NCBI_GP:MBO1928550.1;Name=MBO1928550.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_00355;product=hypothetical protein;protein_id=MBO1928550.1;transl_table=11
JAGETS010000001.1	Genbank	gene	52088	52164	.	-	.	ID=gene-J4731_00360;Name=J4731_00360;gbkey=Gene;gene_biotype=tRNA;locus_tag=J4731_00360
JAGETS010000001.1	tRNAscan-SE	tRNA	52088	52164	.	-	.	ID=rna-J4731_00360;Parent=gene-J4731_00360;anticodon=(pos:complement(52128..52130));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=J4731_00360;product=tRNA-Ile
JAGETS010000001.1	tRNAscan-SE	exon	52088	52164	.	-	.	ID=exon-J4731_00360-1;Parent=rna-J4731_00360;anticodon=(pos:complement(52128..52130));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=J4731_00360;product=tRNA-Ile
JAGETS010000001.1	Genbank	pseudogene	52785	53374	.	-	.	ID=gene-J4731_00365;Name=J4731_00365;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_00365;pseudo=true
JAGETS010000001.1	Protein Homology	CDS	52785	53374	.	-	0	ID=cds-J4731_00365;Parent=gene-J4731_00365;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014657597.1;locus_tag=J4731_00365;product=GNAT family N-acetyltransferase;pseudo=true;transl_table=11
JAGETS010000001.1	Genbank	pseudogene	53664	55608	.	+	.	ID=gene-J4731_00370;Name=J4731_00370;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_00370;pseudo=true
JAGETS010000001.1	Protein Homology	CDS	53664	55608	.	+	0	ID=cds-J4731_00370;Parent=gene-J4731_00370;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004925311.1;locus_tag=J4731_00370;product=NADPH-dependent 2%2C4-dienoyl-CoA reductase;pseudo=true;transl_table=11
JAGETS010000001.1	Genbank	pseudogene	55759	56655	.	+	.	ID=gene-J4731_00375;Name=J4731_00375;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_00375;pseudo=true
JAGETS010000001.1	Protein Homology	CDS	55759	56655	.	+	0	ID=cds-J4731_00375;Parent=gene-J4731_00375;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004258092.1;locus_tag=J4731_00375;product=GTP cyclohydrolase I FolE2;pseudo=true;transl_table=11
JAGETS010000001.1	Genbank	pseudogene	56662	57219	.	+	.	ID=gene-J4731_00380;Name=J4731_00380;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_00380;pseudo=true
JAGETS010000001.1	Protein Homology	CDS	56662	57219	.	+	0	ID=cds-J4731_00380;Parent=gene-J4731_00380;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019452670.1;locus_tag=J4731_00380;product=carbonate dehydratase;pseudo=true;transl_table=11
JAGETS010000001.1	Genbank	pseudogene	57348	58544	.	-	.	ID=gene-J4731_00385;Name=sstT;gbkey=Gene;gene=sstT;gene_biotype=pseudogene;locus_tag=J4731_00385;pseudo=true
JAGETS010000001.1	Protein Homology	CDS	57348	58544	.	-	0	ID=cds-J4731_00385;Parent=gene-J4731_00385;Note=frameshifted%3B internal stop;gbkey=CDS;gene=sstT;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004245243.1;locus_tag=J4731_00385;product=serine/threonine transporter SstT;pseudo=true;transl_table=11
JAGETS010000001.1	Genbank	pseudogene	58783	59742	.	-	.	ID=gene-J4731_00390;Name=J4731_00390;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_00390;pseudo=true
JAGETS010000001.1	Protein Homology	CDS	58783	59742	.	-	0	ID=cds-J4731_00390;Parent=gene-J4731_00390;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001098808.1;locus_tag=J4731_00390;product=TerC/Alx family metal homeostasis membrane protein;pseudo=true;transl_table=11
JAGETS010000001.1	Genbank	pseudogene	60347	61054	.	+	.	ID=gene-J4731_00395;Name=J4731_00395;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_00395;pseudo=true
JAGETS010000001.1	Protein Homology	CDS	60347	61054	.	+	0	ID=cds-J4731_00395;Parent=gene-J4731_00395;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012368851.1;locus_tag=J4731_00395;product=DedA family protein;pseudo=true;transl_table=11
JAGETS010000001.1	Genbank	gene	61240	61545	.	+	.	ID=gene-J4731_00400;Name=J4731_00400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_00400
JAGETS010000001.1	Protein Homology	CDS	61240	61545	.	+	0	ID=cds-MBO1928551.1;Parent=gene-J4731_00400;Dbxref=NCBI_GP:MBO1928551.1;Name=MBO1928551.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008912685.1;locus_tag=J4731_00400;product=DUF883 domain-containing protein;protein_id=MBO1928551.1;transl_table=11
JAGETS010000001.1	Genbank	pseudogene	61552	61955	.	+	.	ID=gene-J4731_00405;Name=J4731_00405;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_00405;pseudo=true
JAGETS010000001.1	Protein Homology	CDS	61552	61955	.	+	0	ID=cds-J4731_00405;Parent=gene-J4731_00405;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016157537.1;locus_tag=J4731_00405;product=phage holin family protein;pseudo=true;transl_table=11
JAGETS010000001.1	Genbank	pseudogene	61942	62236	.	+	.	ID=gene-J4731_00410;Name=J4731_00410;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_00410;pseudo=true
JAGETS010000001.1	Protein Homology	CDS	61942	62236	.	+	0	ID=cds-J4731_00410;Parent=gene-J4731_00410;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004258151.1;locus_tag=J4731_00410;product=YqjK-like family protein;pseudo=true;transl_table=11
JAGETS010000001.1	Genbank	pseudogene	62474	62997	.	+	.	ID=gene-J4731_00415;Name=J4731_00415;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_00415;pseudo=true
JAGETS010000001.1	Protein Homology	CDS	62474	62997	.	+	0	ID=cds-J4731_00415;Parent=gene-J4731_00415;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017373858.1;locus_tag=J4731_00415;product=DoxX family protein;pseudo=true;transl_table=11
JAGETS010000001.1	Genbank	pseudogene	63263	64153	.	-	.	ID=gene-J4731_00420;Name=J4731_00420;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_00420;pseudo=true
JAGETS010000001.1	Protein Homology	CDS	63263	64153	.	-	0	ID=cds-J4731_00420;Parent=gene-J4731_00420;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012125940.1;locus_tag=J4731_00420;product=LysR family transcriptional regulator;pseudo=true;transl_table=11
JAGETS010000001.1	Genbank	pseudogene	64278	64999	.	+	.	ID=gene-J4731_00425;Name=J4731_00425;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_00425;pseudo=true
JAGETS010000001.1	Protein Homology	CDS	64278	64999	.	+	0	ID=cds-J4731_00425;Parent=gene-J4731_00425;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004258163.1;locus_tag=J4731_00425;product=pirin family protein;pseudo=true;transl_table=11
JAGETS010000001.1	Genbank	pseudogene	65110	67068	.	+	.	ID=gene-J4731_00430;Name=J4731_00430;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_00430;pseudo=true
JAGETS010000001.1	Protein Homology	CDS	65110	67068	.	+	0	ID=cds-J4731_00430;Parent=gene-J4731_00430;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004258168.1;locus_tag=J4731_00430;product=BglG family transcription antiterminator;pseudo=true;transl_table=11
JAGETS010000001.1	Genbank	pseudogene	67543	67880	.	+	.	ID=gene-J4731_00435;Name=J4731_00435;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_00435;pseudo=true
JAGETS010000001.1	Protein Homology	CDS	67543	67880	.	+	0	ID=cds-J4731_00435;Parent=gene-J4731_00435;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004925351.1;locus_tag=J4731_00435;product=transcriptional antiterminator;pseudo=true;transl_table=11
JAGETS010000001.1	Genbank	pseudogene	67913	68253	.	+	.	ID=gene-J4731_00440;Name=J4731_00440;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_00440;pseudo=true
JAGETS010000001.1	Protein Homology	CDS	67913	68253	.	+	0	ID=cds-J4731_00440;Parent=gene-J4731_00440;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463302.1;locus_tag=J4731_00440;product=hypothetical protein;pseudo=true;transl_table=11
JAGETS010000001.1	Genbank	gene	68422	68562	.	+	.	ID=gene-J4731_00445;Name=J4731_00445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_00445
JAGETS010000001.1	GeneMarkS-2+	CDS	68422	68562	.	+	0	ID=cds-MBO1928552.1;Parent=gene-J4731_00445;Dbxref=NCBI_GP:MBO1928552.1;Name=MBO1928552.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_00445;product=hypothetical protein;protein_id=MBO1928552.1;transl_table=11
JAGETS010000001.1	Genbank	pseudogene	68603	69374	.	+	.	ID=gene-J4731_00450;Name=J4731_00450;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_00450;pseudo=true
JAGETS010000001.1	Protein Homology	CDS	68603	69374	.	+	0	ID=cds-J4731_00450;Parent=gene-J4731_00450;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224781.1;locus_tag=J4731_00450;product=DUF4311 domain-containing protein;pseudo=true;transl_table=11
JAGETS010000001.1	Genbank	pseudogene	69377	70023	.	+	.	ID=gene-J4731_00455;Name=J4731_00455;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_00455;pseudo=true
JAGETS010000001.1	Protein Homology	CDS	69377	70023	.	+	0	ID=cds-J4731_00455;Parent=gene-J4731_00455;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006814192.1;locus_tag=J4731_00455;product=DUF4310 family protein;pseudo=true;transl_table=11
JAGETS010000001.1	Genbank	pseudogene	70407	71536	.	+	.	ID=gene-J4731_00460;Name=J4731_00460;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_00460;pseudo=true
JAGETS010000001.1	Protein Homology	CDS	70407	71536	.	+	0	ID=cds-J4731_00460;Parent=gene-J4731_00460;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014657590.1;locus_tag=J4731_00460;product=amidohydrolase/deacetylase family metallohydrolase;pseudo=true;transl_table=11
JAGETS010000001.1	Genbank	pseudogene	71520	72625	.	+	.	ID=gene-J4731_00465;Name=J4731_00465;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_00465;pseudo=true
JAGETS010000001.1	Protein Homology	CDS	71520	72625	.	+	0	ID=cds-J4731_00465;Parent=gene-J4731_00465;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006662921.1;locus_tag=J4731_00465;product=DgaE family pyridoxal phosphate-dependent ammonia lyase;pseudo=true;transl_table=11
JAGETS010000001.1	Genbank	pseudogene	72627	73362	.	+	.	ID=gene-J4731_00470;Name=J4731_00470;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_00470;pseudo=true
JAGETS010000001.1	Protein Homology	CDS	72627	73362	.	+	0	ID=cds-J4731_00470;Parent=gene-J4731_00470;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006814195.1;locus_tag=J4731_00470;product=KDGP aldolase family protein;pseudo=true;transl_table=11
JAGETS010000001.1	Genbank	pseudogene	73500	74574	.	-	.	ID=gene-J4731_00475;Name=J4731_00475;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_00475;pseudo=true
JAGETS010000001.1	Protein Homology	CDS	73500	74574	.	-	0	ID=cds-J4731_00475;Parent=gene-J4731_00475;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016149663.1;locus_tag=J4731_00475;product=4Fe-4S binding protein;pseudo=true;transl_table=11
JAGETS010000001.1	Genbank	gene	74874	75241	.	-	.	ID=gene-J4731_00480;Name=rnpB;gbkey=Gene;gene=rnpB;gene_biotype=RNase_P_RNA;locus_tag=J4731_00480
JAGETS010000001.1	cmsearch	RNase_P_RNA	74874	75241	.	-	.	ID=rna-J4731_00480;Parent=gene-J4731_00480;Dbxref=RFAM:RF00010;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=J4731_00480;product=RNase P RNA component class A
JAGETS010000001.1	cmsearch	exon	74874	75241	.	-	.	ID=exon-J4731_00480-1;Parent=rna-J4731_00480;Dbxref=RFAM:RF00010;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=J4731_00480;product=RNase P RNA component class A
JAGETS010000001.1	Genbank	pseudogene	75335	76192	.	-	.	ID=gene-J4731_00485;Name=rsmI;gbkey=Gene;gene=rsmI;gene_biotype=pseudogene;locus_tag=J4731_00485;pseudo=true
JAGETS010000001.1	Protein Homology	CDS	75335	76192	.	-	0	ID=cds-J4731_00485;Parent=gene-J4731_00485;Note=frameshifted%3B internal stop;gbkey=CDS;gene=rsmI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006659125.1;locus_tag=J4731_00485;product=16S rRNA (cytidine(1402)-2'-O)-methyltransferase;pseudo=true;transl_table=11
JAGETS010000001.1	Genbank	pseudogene	76254	77916	.	+	.	ID=gene-J4731_00490;Name=J4731_00490;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_00490;pseudo=true
JAGETS010000001.1	Protein Homology	CDS	76254	77916	.	+	0	ID=cds-J4731_00490;Parent=gene-J4731_00490;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004925385.1;locus_tag=J4731_00490;product=penicillin-binding protein activator;pseudo=true;transl_table=11
JAGETS010000001.1	Genbank	pseudogene	77956	78340	.	+	.	ID=gene-J4731_00495;Name=J4731_00495;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_00495;pseudo=true
JAGETS010000001.1	Protein Homology	CDS	77956	78340	.	+	0	ID=cds-J4731_00495;Parent=gene-J4731_00495;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011148135.1;locus_tag=J4731_00495;product=YraN family protein;pseudo=true;transl_table=11
JAGETS010000001.1	Genbank	pseudogene	78449	79038	.	+	.	ID=gene-J4731_00500;Name=diaA;gbkey=Gene;gene=diaA;gene_biotype=pseudogene;locus_tag=J4731_00500;pseudo=true
JAGETS010000001.1	Protein Homology	CDS	78449	79038	.	+	0	ID=cds-J4731_00500;Parent=gene-J4731_00500;Note=frameshifted;gbkey=CDS;gene=diaA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228994.1;locus_tag=J4731_00500;product=DnaA initiator-associating protein DiaA;pseudo=true;transl_table=11
JAGETS010000001.1	Genbank	pseudogene	79048	79621	.	+	.	ID=gene-J4731_00505;Name=yraP;gbkey=Gene;gene=yraP;gene_biotype=pseudogene;locus_tag=J4731_00505;pseudo=true
JAGETS010000001.1	Protein Homology	CDS	79048	79621	.	+	0	ID=cds-J4731_00505;Parent=gene-J4731_00505;Note=frameshifted;gbkey=CDS;gene=yraP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006814204.1;locus_tag=J4731_00505;product=divisome-associated lipoprotein YraP;pseudo=true;transl_table=11
JAGETS010000001.1	Genbank	pseudogene	79706	80396	.	-	.	ID=gene-J4731_00510;Name=mtgA;gbkey=Gene;gene=mtgA;gene_biotype=pseudogene;locus_tag=J4731_00510;pseudo=true
JAGETS010000001.1	Protein Homology	CDS	79706	80396	.	-	0	ID=cds-J4731_00510;Parent=gene-J4731_00510;Note=frameshifted%3B internal stop;gbkey=CDS;gene=mtgA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014657584.1;locus_tag=J4731_00510;product=monofunctional biosynthetic peptidoglycan transglycosylase;pseudo=true;transl_table=11
JAGETS010000001.1	Genbank	pseudogene	81221	83608	.	-	.	ID=gene-J4731_00515;Name=arcB;gbkey=Gene;gene=arcB;gene_biotype=pseudogene;locus_tag=J4731_00515;pseudo=true
JAGETS010000001.1	Protein Homology	CDS	81221	83608	.	-	0	ID=cds-J4731_00515;Parent=gene-J4731_00515;Note=frameshifted;gbkey=CDS;gene=arcB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002231764.1;locus_tag=J4731_00515;product=aerobic respiration two-component sensor histidine kinase ArcB;pseudo=true;transl_table=11
JAGETS010000001.1	Genbank	pseudogene	83910	85290	.	+	.	ID=gene-J4731_00520;Name=J4731_00520;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_00520;pseudo=true
JAGETS010000001.1	Protein Homology	CDS	83910	85290	.	+	0	ID=cds-J4731_00520;Parent=gene-J4731_00520;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004236349.1;locus_tag=J4731_00520;product=FAD-dependent oxidoreductase;pseudo=true;transl_table=11
JAGETS010000001.1	Genbank	gene	85384	85845	.	-	.	ID=gene-J4731_00525;Name=sspB;gbkey=Gene;gene=sspB;gene_biotype=protein_coding;locus_tag=J4731_00525
JAGETS010000001.1	Protein Homology	CDS	85384	85845	.	-	0	ID=cds-MBO1928553.1;Parent=gene-J4731_00525;Dbxref=NCBI_GP:MBO1928553.1;Name=MBO1928553.1;gbkey=CDS;gene=sspB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210136.1;locus_tag=J4731_00525;product=ClpXP protease specificity-enhancing factor;protein_id=MBO1928553.1;transl_table=11
JAGETS010000001.1	Genbank	pseudogene	85867	86504	.	-	.	ID=gene-J4731_00530;Name=sspA;gbkey=Gene;gene=sspA;gene_biotype=pseudogene;locus_tag=J4731_00530;pseudo=true
JAGETS010000001.1	Protein Homology	CDS	85867	86504	.	-	0	ID=cds-J4731_00530;Parent=gene-J4731_00530;Note=frameshifted;gbkey=CDS;gene=sspA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005162411.1;locus_tag=J4731_00530;product=stringent starvation protein A;pseudo=true;transl_table=11
JAGETS010000001.1	Genbank	pseudogene	87037	87422	.	-	.	ID=gene-J4731_00535;Name=rpsI;gbkey=Gene;gene=rpsI;gene_biotype=pseudogene;locus_tag=J4731_00535;pseudo=true
JAGETS010000001.1	Protein Homology	CDS	87037	87422	.	-	0	ID=cds-J4731_00535;Parent=gene-J4731_00535;Note=frameshifted;gbkey=CDS;gene=rpsI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000829824.1;locus_tag=J4731_00535;product=30S ribosomal protein S9;pseudo=true;transl_table=11
JAGETS010000001.1	Genbank	pseudogene	87437	87861	.	-	.	ID=gene-J4731_00540;Name=rplM;gbkey=Gene;gene=rplM;gene_biotype=pseudogene;locus_tag=J4731_00540;pseudo=true
JAGETS010000001.1	Protein Homology	CDS	87437	87861	.	-	0	ID=cds-J4731_00540;Parent=gene-J4731_00540;Note=frameshifted;gbkey=CDS;gene=rplM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010847760.1;locus_tag=J4731_00540;product=50S ribosomal protein L13;pseudo=true;transl_table=11
JAGETS010000001.1	Genbank	pseudogene	88161	89267	.	-	.	ID=gene-J4731_00545;Name=J4731_00545;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_00545;pseudo=true
JAGETS010000001.1	Protein Homology	CDS	88161	89267	.	-	0	ID=cds-J4731_00545;Parent=gene-J4731_00545;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006662913.1;locus_tag=J4731_00545;product=AFG1 family ATPase;pseudo=true;transl_table=11
JAGETS010000001.1	Genbank	pseudogene	89609	90009	.	+	.	ID=gene-J4731_00550;Name=J4731_00550;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_00550;pseudo=true
JAGETS010000001.1	Protein Homology	CDS	89609	90009	.	+	0	ID=cds-J4731_00550;Parent=gene-J4731_00550;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006814216.1;locus_tag=J4731_00550;product=DUF1043 family protein;pseudo=true;transl_table=11
JAGETS010000001.1	Genbank	pseudogene	90383	91791	.	+	.	ID=gene-J4731_00555;Name=J4731_00555;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_00555;pseudo=true
JAGETS010000001.1	Protein Homology	CDS	90383	91791	.	+	0	ID=cds-J4731_00555;Parent=gene-J4731_00555;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004236340.1;locus_tag=J4731_00555;product=Do family serine endopeptidase;pseudo=true;transl_table=11
JAGETS010000001.1	Genbank	pseudogene	91887	92944	.	+	.	ID=gene-J4731_00560;Name=degS;gbkey=Gene;gene=degS;gene_biotype=pseudogene;locus_tag=J4731_00560;pseudo=true
JAGETS010000001.1	Protein Homology	CDS	91887	92944	.	+	0	ID=cds-J4731_00560;Parent=gene-J4731_00560;Note=frameshifted;gbkey=CDS;gene=degS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004925447.1;locus_tag=J4731_00560;product=outer membrane-stress sensor serine endopeptidase DegS;pseudo=true;transl_table=11
JAGETS010000001.1	Genbank	pseudogene	93041	94298	.	-	.	ID=gene-J4731_00565;Name=murA;gbkey=Gene;gene=murA;gene_biotype=pseudogene;locus_tag=J4731_00565;pseudo=true
JAGETS010000001.1	Protein Homology	CDS	93041	94298	.	-	0	ID=cds-J4731_00565;Parent=gene-J4731_00565;Note=frameshifted;gbkey=CDS;gene=murA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004245292.1;locus_tag=J4731_00565;product=UDP-N-acetylglucosamine 1-carboxyvinyltransferase;pseudo=true;transl_table=11
JAGETS010000001.1	Genbank	pseudogene	94351	94604	.	-	.	ID=gene-J4731_00570;Name=ibaG;gbkey=Gene;gene=ibaG;gene_biotype=pseudogene;locus_tag=J4731_00570;pseudo=true
JAGETS010000001.1	Protein Homology	CDS	94351	94604	.	-	0	ID=cds-J4731_00570;Parent=gene-J4731_00570;Note=frameshifted;gbkey=CDS;gene=ibaG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000368006.1;locus_tag=J4731_00570;product=BolA family iron metabolism protein IbaG;pseudo=true;transl_table=11
JAGETS010000001.1	Genbank	gene	95108	95734	.	-	.	ID=gene-J4731_00575;Name=mlaC;gbkey=Gene;gene=mlaC;gene_biotype=protein_coding;locus_tag=J4731_00575
JAGETS010000001.1	Protein Homology	CDS	95108	95734	.	-	0	ID=cds-MBO1928554.1;Parent=gene-J4731_00575;Dbxref=NCBI_GP:MBO1928554.1;Name=MBO1928554.1;gbkey=CDS;gene=mlaC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010847750.1;locus_tag=J4731_00575;product=phospholipid-binding protein MlaC;protein_id=MBO1928554.1;transl_table=11
JAGETS010000001.1	Genbank	pseudogene	95769	96231	.	-	.	ID=gene-J4731_00580;Name=mlaD;gbkey=Gene;gene=mlaD;gene_biotype=pseudogene;locus_tag=J4731_00580;pseudo=true
JAGETS010000001.1	Protein Homology	CDS	95769	96231	.	-	0	ID=cds-J4731_00580;Parent=gene-J4731_00580;Note=frameshifted;gbkey=CDS;gene=mlaD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004258272.1;locus_tag=J4731_00580;product=outer membrane lipid asymmetry maintenance protein MlaD;pseudo=true;transl_table=11
JAGETS010000001.1	Genbank	pseudogene	96272	96907	.	-	.	ID=gene-J4731_00585;Name=mlaE;gbkey=Gene;gene=mlaE;gene_biotype=pseudogene;locus_tag=J4731_00585;pseudo=true
JAGETS010000001.1	Protein Homology	CDS	96272	96907	.	-	0	ID=cds-J4731_00585;Parent=gene-J4731_00585;Note=frameshifted;gbkey=CDS;gene=mlaE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004710921.1;locus_tag=J4731_00585;product=lipid asymmetry maintenance ABC transporter permease subunit MlaE;pseudo=true;transl_table=11
JAGETS010000001.1	Genbank	pseudogene	97057	97830	.	-	.	ID=gene-J4731_00590;Name=J4731_00590;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_00590;pseudo=true
JAGETS010000001.1	Protein Homology	CDS	97057	97830	.	-	0	ID=cds-J4731_00590;Parent=gene-J4731_00590;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002355124.1;locus_tag=J4731_00590;product=ATP-binding cassette domain-containing protein;pseudo=true;transl_table=11
JAGETS010000001.1	Genbank	pseudogene	98303	99248	.	+	.	ID=gene-J4731_00595;Name=kdsD;gbkey=Gene;gene=kdsD;gene_biotype=pseudogene;locus_tag=J4731_00595;pseudo=true
JAGETS010000001.1	Protein Homology	CDS	98303	99248	.	+	0	ID=cds-J4731_00595;Parent=gene-J4731_00595;Note=frameshifted%3B internal stop;gbkey=CDS;gene=kdsD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008912632.1;locus_tag=J4731_00595;product=arabinose-5-phosphate isomerase KdsD;pseudo=true;transl_table=11
JAGETS010000001.1	Genbank	pseudogene	99330	99821	.	+	.	ID=gene-J4731_00600;Name=kdsC;gbkey=Gene;gene=kdsC;gene_biotype=pseudogene;locus_tag=J4731_00600;pseudo=true
JAGETS010000001.1	Protein Homology	CDS	99330	99821	.	+	0	ID=cds-J4731_00600;Parent=gene-J4731_00600;Note=frameshifted%3B internal stop;gbkey=CDS;gene=kdsC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210118.1;locus_tag=J4731_00600;product=3-deoxy-manno-octulosonate-8-phosphatase KdsC;pseudo=true;transl_table=11
JAGETS010000001.1	Genbank	pseudogene	99831	100402	.	+	.	ID=gene-J4731_00605;Name=lptC;gbkey=Gene;gene=lptC;gene_biotype=pseudogene;locus_tag=J4731_00605;pseudo=true
JAGETS010000001.1	Protein Homology	CDS	99831	100402	.	+	0	ID=cds-J4731_00605;Parent=gene-J4731_00605;Note=frameshifted;gbkey=CDS;gene=lptC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015835759.1;locus_tag=J4731_00605;product=LPS export ABC transporter periplasmic protein LptC;pseudo=true;transl_table=11
JAGETS010000001.1	Genbank	pseudogene	100404	100955	.	+	.	ID=gene-J4731_00610;Name=lptA;gbkey=Gene;gene=lptA;gene_biotype=pseudogene;locus_tag=J4731_00610;pseudo=true
JAGETS010000001.1	Protein Homology	CDS	100404	100955	.	+	0	ID=cds-J4731_00610;Parent=gene-J4731_00610;Note=frameshifted;gbkey=CDS;gene=lptA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006659095.1;locus_tag=J4731_00610;product=lipopolysaccharide ABC transporter substrate-binding protein LptA;pseudo=true;transl_table=11
JAGETS010000001.1	Genbank	pseudogene	101030	101661	.	+	.	ID=gene-J4731_00615;Name=lptB;gbkey=Gene;gene=lptB;gene_biotype=pseudogene;locus_tag=J4731_00615;pseudo=true
JAGETS010000001.1	Protein Homology	CDS	101030	101661	.	+	0	ID=cds-J4731_00615;Parent=gene-J4731_00615;Note=frameshifted%3B internal stop;gbkey=CDS;gene=lptB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001382477.1;locus_tag=J4731_00615;product=LPS export ABC transporter ATP-binding protein;pseudo=true;transl_table=11
JAGETS010000001.1	Genbank	pseudogene	101703	103131	.	+	.	ID=gene-J4731_00620;Name=J4731_00620;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_00620;pseudo=true
JAGETS010000001.1	Protein Homology	CDS	101703	103131	.	+	0	ID=cds-J4731_00620;Parent=gene-J4731_00620;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001610176.1;locus_tag=J4731_00620;product=RNA polymerase factor sigma-54;pseudo=true;transl_table=11
JAGETS010000001.1	Genbank	pseudogene	103154	103385	.	+	.	ID=gene-J4731_00625;Name=raiA;gbkey=Gene;gene=raiA;gene_biotype=pseudogene;locus_tag=J4731_00625;pseudo=true
JAGETS010000001.1	Protein Homology	CDS	103154	103385	.	+	0	ID=cds-J4731_00625;Parent=gene-J4731_00625;Note=frameshifted;gbkey=CDS;gene=raiA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005975449.1;locus_tag=J4731_00625;product=ribosome-associated translation inhibitor RaiA;pseudo=true;transl_table=11
JAGETS010000001.1	Genbank	pseudogene	103547	103991	.	+	.	ID=gene-J4731_00630;Name=ptsN;gbkey=Gene;gene=ptsN;gene_biotype=pseudogene;locus_tag=J4731_00630;pseudo=true
JAGETS010000001.1	Protein Homology	CDS	103547	103991	.	+	0	ID=cds-J4731_00630;Parent=gene-J4731_00630;Note=frameshifted;gbkey=CDS;gene=ptsN;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006317108.1;locus_tag=J4731_00630;product=PTS IIA-like nitrogen regulatory protein PtsN;pseudo=true;transl_table=11
JAGETS010000001.1	Genbank	pseudogene	104111	104958	.	+	.	ID=gene-J4731_00635;Name=rapZ;gbkey=Gene;gene=rapZ;gene_biotype=pseudogene;locus_tag=J4731_00635;pseudo=true
JAGETS010000001.1	Protein Homology	CDS	104111	104958	.	+	0	ID=cds-J4731_00635;Parent=gene-J4731_00635;Note=frameshifted;gbkey=CDS;gene=rapZ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229054.1;locus_tag=J4731_00635;product=RNase adapter RapZ;pseudo=true;transl_table=11
JAGETS010000001.1	Genbank	gene	104964	105236	.	+	.	ID=gene-J4731_00640;Name=npr;gbkey=Gene;gene=npr;gene_biotype=protein_coding;locus_tag=J4731_00640
JAGETS010000001.1	Protein Homology	CDS	104964	105236	.	+	0	ID=cds-MBO1928555.1;Parent=gene-J4731_00640;Dbxref=NCBI_GP:MBO1928555.1;Name=MBO1928555.1;gbkey=CDS;gene=npr;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006659087.1;locus_tag=J4731_00640;product=PTS phosphocarrier protein NPr;protein_id=MBO1928555.1;transl_table=11
JAGETS010000001.1	Genbank	pseudogene	105443	105852	.	+	.	ID=gene-J4731_00645;Name=rnk;gbkey=Gene;gene=rnk;gene_biotype=pseudogene;locus_tag=J4731_00645;pseudo=true
JAGETS010000001.1	Protein Homology	CDS	105443	105852	.	+	0	ID=cds-J4731_00645;Parent=gene-J4731_00645;Note=frameshifted;gbkey=CDS;gene=rnk;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210103.1;locus_tag=J4731_00645;product=nucleoside diphosphate kinase regulator;pseudo=true;transl_table=11
JAGETS010000001.1	Genbank	pseudogene	105982	107310	.	-	.	ID=gene-J4731_00650;Name=pmbA;gbkey=Gene;gene=pmbA;gene_biotype=pseudogene;locus_tag=J4731_00650;pseudo=true
JAGETS010000001.1	Protein Homology	CDS	105982	107310	.	-	0	ID=cds-J4731_00650;Parent=gene-J4731_00650;Note=frameshifted;gbkey=CDS;gene=pmbA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009087411.1;locus_tag=J4731_00650;product=metalloprotease PmbA;pseudo=true;transl_table=11
JAGETS010000001.1	Genbank	pseudogene	107493	108019	.	+	.	ID=gene-J4731_00655;Name=J4731_00655;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_00655;pseudo=true
JAGETS010000001.1	Protein Homology	CDS	107493	108019	.	+	0	ID=cds-J4731_00655;Parent=gene-J4731_00655;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000166270.1;locus_tag=J4731_00655;product=ribosome-associated protein;pseudo=true;transl_table=11
JAGETS010000001.1	Genbank	pseudogene	108342	108666	.	+	.	ID=gene-J4731_00660;Name=J4731_00660;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_00660;pseudo=true
JAGETS010000001.1	Protein Homology	CDS	108342	108666	.	+	0	ID=cds-J4731_00660;Parent=gene-J4731_00660;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004258336.1;locus_tag=J4731_00660;product=phosphotyrosine protein phosphatase;pseudo=true;transl_table=11
JAGETS010000001.1	Genbank	pseudogene	108663	109192	.	-	.	ID=gene-J4731_00665;Name=J4731_00665;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_00665;pseudo=true
JAGETS010000001.1	Protein Homology	CDS	108663	109192	.	-	0	ID=cds-J4731_00665;Parent=gene-J4731_00665;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004925517.1;locus_tag=J4731_00665;product=serine hydrolase family protein;pseudo=true;transl_table=11
JAGETS010000001.1	Genbank	gene	109301	109555	.	-	.	ID=gene-J4731_00670;Name=J4731_00670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_00670
JAGETS010000001.1	Protein Homology	CDS	109301	109555	.	-	0	ID=cds-MBO1928556.1;Parent=gene-J4731_00670;Dbxref=NCBI_GP:MBO1928556.1;Name=MBO1928556.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004925519.1;locus_tag=J4731_00670;product=barstar family protein;protein_id=MBO1928556.1;transl_table=11
JAGETS010000001.1	Genbank	pseudogene	109601	109883	.	-	.	ID=gene-J4731_00675;Name=J4731_00675;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_00675;pseudo=true
JAGETS010000001.1	Protein Homology	CDS	109601	109883	.	-	0	ID=cds-J4731_00675;Parent=gene-J4731_00675;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008912613.1;locus_tag=J4731_00675;product=hypothetical protein;pseudo=true;transl_table=11
JAGETS010000001.1	Genbank	pseudogene	110187	111621	.	-	.	ID=gene-J4731_00680;Name=tldD;gbkey=Gene;gene=tldD;gene_biotype=pseudogene;locus_tag=J4731_00680;pseudo=true
JAGETS010000001.1	Protein Homology	CDS	110187	111621	.	-	0	ID=cds-J4731_00680;Parent=gene-J4731_00680;Note=frameshifted;gbkey=CDS;gene=tldD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007888214.1;locus_tag=J4731_00680;product=metalloprotease TldD;pseudo=true;transl_table=11
JAGETS010000001.1	Genbank	pseudogene	111627	112446	.	-	.	ID=gene-J4731_00685;Name=J4731_00685;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_00685;pseudo=true
JAGETS010000001.1	Protein Homology	CDS	111627	112446	.	-	0	ID=cds-J4731_00685;Parent=gene-J4731_00685;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019453168.1;locus_tag=J4731_00685;product=carbon-nitrogen hydrolase family protein;pseudo=true;transl_table=11
JAGETS010000001.1	Genbank	pseudogene	112468	116223	.	-	.	ID=gene-J4731_00690;Name=yhdP;gbkey=Gene;gene=yhdP;gene_biotype=pseudogene;locus_tag=J4731_00690;pseudo=true
JAGETS010000001.1	Protein Homology	CDS	112468	116223	.	-	0	ID=cds-J4731_00690;Parent=gene-J4731_00690;Note=frameshifted;gbkey=CDS;gene=yhdP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011148189.1;locus_tag=J4731_00690;product=AsmA2 domain-containing protein YhdP;pseudo=true;transl_table=11
JAGETS010000001.1	Genbank	pseudogene	116235	117678	.	-	.	ID=gene-J4731_00695;Name=rng;gbkey=Gene;gene=rng;gene_biotype=pseudogene;locus_tag=J4731_00695;pseudo=true
JAGETS010000001.1	Protein Homology	CDS	116235	117678	.	-	0	ID=cds-J4731_00695;Parent=gene-J4731_00695;Note=frameshifted%3B internal stop;gbkey=CDS;gene=rng;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006818051.1;locus_tag=J4731_00695;product=ribonuclease G;pseudo=true;transl_table=11
JAGETS010000001.1	Genbank	pseudogene	117641	118248	.	-	.	ID=gene-J4731_00700;Name=maf;gbkey=Gene;gene=maf;gene_biotype=pseudogene;locus_tag=J4731_00700;pseudo=true
JAGETS010000001.1	Protein Homology	CDS	117641	118248	.	-	0	ID=cds-J4731_00700;Parent=gene-J4731_00700;Note=frameshifted;gbkey=CDS;gene=maf;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010847925.1;locus_tag=J4731_00700;product=septum formation inhibitor Maf;pseudo=true;transl_table=11
JAGETS010000001.1	Genbank	pseudogene	118284	118707	.	-	.	ID=gene-J4731_00705;Name=mreD;gbkey=Gene;gene=mreD;gene_biotype=pseudogene;locus_tag=J4731_00705;pseudo=true
JAGETS010000001.1	Protein Homology	CDS	118284	118707	.	-	0	ID=cds-J4731_00705;Parent=gene-J4731_00705;Note=frameshifted;gbkey=CDS;gene=mreD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004715001.1;locus_tag=J4731_00705;product=rod shape-determining protein MreD;pseudo=true;transl_table=11
JAGETS010000001.1	Genbank	pseudogene	118808	119770	.	-	.	ID=gene-J4731_00710;Name=mreC;gbkey=Gene;gene=mreC;gene_biotype=pseudogene;locus_tag=J4731_00710;pseudo=true
JAGETS010000001.1	Protein Homology	CDS	118808	119770	.	-	0	ID=cds-J4731_00710;Parent=gene-J4731_00710;Note=frameshifted;gbkey=CDS;gene=mreC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010681557.1;locus_tag=J4731_00710;product=rod shape-determining protein MreC;pseudo=true;transl_table=11
JAGETS010000001.1	Genbank	pseudogene	119854	120892	.	-	.	ID=gene-J4731_00715;Name=J4731_00715;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_00715;pseudo=true
JAGETS010000001.1	Protein Homology	CDS	119854	120892	.	-	0	ID=cds-J4731_00715;Parent=gene-J4731_00715;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000913396.1;locus_tag=J4731_00715;product=rod shape-determining protein;pseudo=true;transl_table=11
JAGETS010000001.1	Genbank	pseudogene	121489	122458	.	+	.	ID=gene-J4731_00720;Name=J4731_00720;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_00720;pseudo=true
JAGETS010000001.1	Protein Homology	CDS	121489	122458	.	+	0	ID=cds-J4731_00720;Parent=gene-J4731_00720;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004258399.1;locus_tag=J4731_00720;product=oxidoreductase;pseudo=true;transl_table=11
JAGETS010000001.1	Genbank	gene	122720	123157	.	+	.	ID=gene-J4731_00725;Name=aroQ;gbkey=Gene;gene=aroQ;gene_biotype=protein_coding;locus_tag=J4731_00725
JAGETS010000001.1	Protein Homology	CDS	122720	123157	.	+	0	ID=cds-MBO1928557.1;Parent=gene-J4731_00725;Dbxref=NCBI_GP:MBO1928557.1;Name=MBO1928557.1;gbkey=CDS;gene=aroQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016538430.1;locus_tag=J4731_00725;product=type II 3-dehydroquinate dehydratase;protein_id=MBO1928557.1;transl_table=11
JAGETS010000001.1	Genbank	pseudogene	123176	123642	.	+	.	ID=gene-J4731_00730;Name=accB;gbkey=Gene;gene=accB;gene_biotype=pseudogene;gene_synonym=fabE;locus_tag=J4731_00730;pseudo=true
JAGETS010000001.1	Protein Homology	CDS	123176	123642	.	+	0	ID=cds-J4731_00730;Parent=gene-J4731_00730;Note=frameshifted;gbkey=CDS;gene=accB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001593360.1;locus_tag=J4731_00730;product=acetyl-CoA carboxylase biotin carboxyl carrier protein;pseudo=true;transl_table=11
JAGETS010000001.1	Genbank	pseudogene	123639	125032	.	+	.	ID=gene-J4731_00735;Name=accC;gbkey=Gene;gene=accC;gene_biotype=pseudogene;locus_tag=J4731_00735;pseudo=true
JAGETS010000001.1	Protein Homology	CDS	123639	125032	.	+	0	ID=cds-J4731_00735;Parent=gene-J4731_00735;Note=frameshifted;gbkey=CDS;gene=accC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006708958.1;locus_tag=J4731_00735;product=acetyl-CoA carboxylase biotin carboxylase subunit;pseudo=true;transl_table=11
JAGETS010000001.1	Genbank	gene	125163	125405	.	+	.	ID=gene-J4731_00740;Name=J4731_00740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_00740
JAGETS010000001.1	Protein Homology	CDS	125163	125405	.	+	0	ID=cds-MBO1928558.1;Parent=gene-J4731_00740;Dbxref=NCBI_GP:MBO1928558.1;Name=MBO1928558.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006662895.1;locus_tag=J4731_00740;product=DUF997 family protein;protein_id=MBO1928558.1;transl_table=11
JAGETS010000001.1	Genbank	pseudogene	125395	126830	.	+	.	ID=gene-J4731_00745;Name=panF;gbkey=Gene;gene=panF;gene_biotype=pseudogene;locus_tag=J4731_00745;pseudo=true
JAGETS010000001.1	Protein Homology	CDS	125395	126830	.	+	0	ID=cds-J4731_00745;Parent=gene-J4731_00745;Note=frameshifted%3B internal stop;gbkey=CDS;gene=panF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010847915.1;locus_tag=J4731_00745;product=sodium/pantothenate symporter;pseudo=true;transl_table=11
JAGETS010000001.1	Genbank	pseudogene	127035	127997	.	+	.	ID=gene-J4731_00750;Name=prmA;gbkey=Gene;gene=prmA;gene_biotype=pseudogene;locus_tag=J4731_00750;pseudo=true
JAGETS010000001.1	Protein Homology	CDS	127035	127997	.	+	0	ID=cds-J4731_00750;Parent=gene-J4731_00750;Note=frameshifted%3B internal stop;gbkey=CDS;gene=prmA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004387845.1;locus_tag=J4731_00750;product=50S ribosomal protein L11 methyltransferase;pseudo=true;transl_table=11
JAGETS010000001.1	Genbank	pseudogene	128212	129175	.	+	.	ID=gene-J4731_00755;Name=dusB;gbkey=Gene;gene=dusB;gene_biotype=pseudogene;locus_tag=J4731_00755;pseudo=true
JAGETS010000001.1	Protein Homology	CDS	128212	129175	.	+	0	ID=cds-J4731_00755;Parent=gene-J4731_00755;Note=frameshifted;gbkey=CDS;gene=dusB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004936856.1;locus_tag=J4731_00755;product=tRNA dihydrouridine synthase DusB;pseudo=true;transl_table=11
JAGETS010000001.1	Genbank	gene	129196	129483	.	+	.	ID=gene-J4731_00760;Name=fis;gbkey=Gene;gene=fis;gene_biotype=protein_coding;locus_tag=J4731_00760
JAGETS010000001.1	Protein Homology	CDS	129196	129483	.	+	0	ID=cds-MBO1928559.1;Parent=gene-J4731_00760;Dbxref=NCBI_GP:MBO1928559.1;Name=MBO1928559.1;gbkey=CDS;gene=fis;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000462906.1;locus_tag=J4731_00760;product=DNA-binding transcriptional regulator Fis;protein_id=MBO1928559.1;transl_table=11
JAGETS010000001.1	Genbank	gene	129711	130163	.	+	.	ID=gene-J4731_00765;Name=J4731_00765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_00765
JAGETS010000001.1	GeneMarkS-2+	CDS	129711	130163	.	+	0	ID=cds-MBO1928560.1;Parent=gene-J4731_00765;Dbxref=NCBI_GP:MBO1928560.1;Name=MBO1928560.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_00765;product=hypothetical protein;protein_id=MBO1928560.1;transl_table=11
JAGETS010000001.1	Genbank	pseudogene	130608	131612	.	+	.	ID=gene-J4731_00770;Name=J4731_00770;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_00770;pseudo=true
JAGETS010000001.1	Protein Homology	CDS	130608	131612	.	+	0	ID=cds-J4731_00770;Parent=gene-J4731_00770;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001420075.1;locus_tag=J4731_00770;product=adenylate/guanylate cyclase domain-containing protein;pseudo=true;transl_table=11
JAGETS010000001.1	Genbank	gene	131776	131973	.	-	.	ID=gene-J4731_00775;Name=J4731_00775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_00775
JAGETS010000001.1	GeneMarkS-2+	CDS	131776	131973	.	-	0	ID=cds-MBO1928561.1;Parent=gene-J4731_00775;Dbxref=NCBI_GP:MBO1928561.1;Name=MBO1928561.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_00775;product=hypothetical protein;protein_id=MBO1928561.1;transl_table=11
JAGETS010000001.1	Genbank	gene	132188	132337	.	-	.	ID=gene-J4731_00780;Name=J4731_00780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_00780
JAGETS010000001.1	GeneMarkS-2+	CDS	132188	132337	.	-	0	ID=cds-MBO1928562.1;Parent=gene-J4731_00780;Dbxref=NCBI_GP:MBO1928562.1;Name=MBO1928562.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_00780;product=hypothetical protein;protein_id=MBO1928562.1;transl_table=11
JAGETS010000001.1	Genbank	gene	132550	132729	.	-	.	ID=gene-J4731_00785;Name=J4731_00785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_00785
JAGETS010000001.1	GeneMarkS-2+	CDS	132550	132729	.	-	0	ID=cds-MBO1928563.1;Parent=gene-J4731_00785;Dbxref=NCBI_GP:MBO1928563.1;Name=MBO1928563.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_00785;product=hypothetical protein;protein_id=MBO1928563.1;transl_table=11
JAGETS010000001.1	Genbank	gene	133325	133591	.	-	.	ID=gene-J4731_00790;Name=J4731_00790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_00790
JAGETS010000001.1	GeneMarkS-2+	CDS	133325	133591	.	-	0	ID=cds-MBO1928564.1;Parent=gene-J4731_00790;Dbxref=NCBI_GP:MBO1928564.1;Name=MBO1928564.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_00790;product=hypothetical protein;protein_id=MBO1928564.1;transl_table=11
JAGETS010000001.1	Genbank	gene	133593	133958	.	-	.	ID=gene-J4731_00795;Name=J4731_00795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_00795
JAGETS010000001.1	Protein Homology	CDS	133593	133958	.	-	0	ID=cds-MBO1928565.1;Parent=gene-J4731_00795;Dbxref=NCBI_GP:MBO1928565.1;Name=MBO1928565.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009112628.1;locus_tag=J4731_00795;product=phage tail assembly protein;protein_id=MBO1928565.1;transl_table=11
JAGETS010000001.1	Genbank	pseudogene	134032	134604	.	-	.	ID=gene-J4731_00800;Name=J4731_00800;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_00800;pseudo=true
JAGETS010000001.1	Protein Homology	CDS	134032	134604	.	-	0	ID=cds-J4731_00800;Parent=gene-J4731_00800;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012303536.1;locus_tag=J4731_00800;product=hypothetical protein;pseudo=true;transl_table=11
JAGETS010000001.1	Genbank	gene	134927	135097	.	-	.	ID=gene-J4731_00805;Name=J4731_00805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_00805
JAGETS010000001.1	GeneMarkS-2+	CDS	134927	135097	.	-	0	ID=cds-MBO1928566.1;Parent=gene-J4731_00805;Dbxref=NCBI_GP:MBO1928566.1;Name=MBO1928566.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_00805;product=hypothetical protein;protein_id=MBO1928566.1;transl_table=11
JAGETS010000001.1	Genbank	gene	135094	135537	.	-	.	ID=gene-J4731_00810;Name=J4731_00810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_00810
JAGETS010000001.1	GeneMarkS-2+	CDS	135094	135537	.	-	0	ID=cds-MBO1928567.1;Parent=gene-J4731_00810;Dbxref=NCBI_GP:MBO1928567.1;Name=MBO1928567.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_00810;product=hypothetical protein;protein_id=MBO1928567.1;transl_table=11
JAGETS010000001.1	Genbank	gene	135719	135940	.	-	.	ID=gene-J4731_00815;Name=J4731_00815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_00815
JAGETS010000001.1	GeneMarkS-2+	CDS	135719	135940	.	-	0	ID=cds-MBO1928568.1;Parent=gene-J4731_00815;Dbxref=NCBI_GP:MBO1928568.1;Name=MBO1928568.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_00815;product=hypothetical protein;protein_id=MBO1928568.1;transl_table=11
JAGETS010000001.1	Genbank	gene	136238	136402	.	-	.	ID=gene-J4731_00820;Name=J4731_00820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_00820
JAGETS010000001.1	Protein Homology	CDS	136238	136402	.	-	0	ID=cds-MBO1928569.1;Parent=gene-J4731_00820;Dbxref=NCBI_GP:MBO1928569.1;Name=MBO1928569.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000301365.1;locus_tag=J4731_00820;product=hypothetical protein;protein_id=MBO1928569.1;transl_table=11
JAGETS010000001.1	Genbank	pseudogene	136727	137225	.	+	.	ID=gene-J4731_00825;Name=J4731_00825;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_00825;pseudo=true
JAGETS010000001.1	Protein Homology	CDS	136727	137225	.	+	0	ID=cds-J4731_00825;Parent=gene-J4731_00825;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000365446.1;locus_tag=J4731_00825;product=hypothetical protein;pseudo=true;transl_table=11
JAGETS010000001.1	Genbank	gene	138077	138985	.	-	.	ID=gene-J4731_00830;Name=J4731_00830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_00830
JAGETS010000001.1	GeneMarkS-2+	CDS	138077	138985	.	-	0	ID=cds-MBO1928570.1;Parent=gene-J4731_00830;Dbxref=NCBI_GP:MBO1928570.1;Name=MBO1928570.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_00830;product=hypothetical protein;protein_id=MBO1928570.1;transl_table=11
JAGETS010000001.1	Genbank	gene	138978	139589	.	-	.	ID=gene-J4731_00835;Name=J4731_00835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_00835
JAGETS010000001.1	GeneMarkS-2+	CDS	138978	139589	.	-	0	ID=cds-MBO1928571.1;Parent=gene-J4731_00835;Dbxref=NCBI_GP:MBO1928571.1;Name=MBO1928571.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_00835;product=hypothetical protein;protein_id=MBO1928571.1;transl_table=11
JAGETS010000001.1	Genbank	gene	139694	139921	.	-	.	ID=gene-J4731_00840;Name=J4731_00840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_00840
JAGETS010000001.1	GeneMarkS-2+	CDS	139694	139921	.	-	0	ID=cds-MBO1928572.1;Parent=gene-J4731_00840;Dbxref=NCBI_GP:MBO1928572.1;Name=MBO1928572.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_00840;product=hypothetical protein;protein_id=MBO1928572.1;transl_table=11
JAGETS010000001.1	Genbank	gene	139925	140218	.	-	.	ID=gene-J4731_00845;Name=J4731_00845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_00845
JAGETS010000001.1	GeneMarkS-2+	CDS	139925	140218	.	-	0	ID=cds-MBO1928573.1;Parent=gene-J4731_00845;Dbxref=NCBI_GP:MBO1928573.1;Name=MBO1928573.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_00845;product=hypothetical protein;protein_id=MBO1928573.1;transl_table=11
JAGETS010000001.1	Genbank	gene	140221	140436	.	-	.	ID=gene-J4731_00850;Name=J4731_00850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_00850
JAGETS010000001.1	GeneMarkS-2+	CDS	140221	140436	.	-	0	ID=cds-MBO1928574.1;Parent=gene-J4731_00850;Dbxref=NCBI_GP:MBO1928574.1;Name=MBO1928574.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_00850;product=hypothetical protein;protein_id=MBO1928574.1;transl_table=11
JAGETS010000001.1	Genbank	pseudogene	140439	140608	.	-	.	ID=gene-J4731_00855;Name=J4731_00855;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_00855;pseudo=true
JAGETS010000001.1	Protein Homology	CDS	140439	140608	.	-	0	ID=cds-J4731_00855;Parent=gene-J4731_00855;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004265088.1;locus_tag=J4731_00855;product=DUF4222 domain-containing protein;pseudo=true;transl_table=11
JAGETS010000001.1	Genbank	gene	140789	140998	.	-	.	ID=gene-J4731_00860;Name=J4731_00860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_00860
JAGETS010000001.1	GeneMarkS-2+	CDS	140789	140998	.	-	0	ID=cds-MBO1928575.1;Parent=gene-J4731_00860;Dbxref=NCBI_GP:MBO1928575.1;Name=MBO1928575.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_00860;product=hypothetical protein;protein_id=MBO1928575.1;transl_table=11
JAGETS010000001.1	Genbank	pseudogene	142004	142858	.	-	.	ID=gene-J4731_00865;Name=J4731_00865;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_00865;pseudo=true
JAGETS010000001.1	Protein Homology	CDS	142004	142858	.	-	0	ID=cds-J4731_00865;Parent=gene-J4731_00865;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012987291.1;locus_tag=J4731_00865;product=antA/AntB antirepressor family protein;pseudo=true;transl_table=11
JAGETS010000001.1	Genbank	pseudogene	144008	145198	.	-	.	ID=gene-J4731_00870;Name=J4731_00870;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_00870;pseudo=true
JAGETS010000001.1	Protein Homology	CDS	144008	145198	.	-	0	ID=cds-J4731_00870;Parent=gene-J4731_00870;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006178887.1;locus_tag=J4731_00870;product=site-specific integrase;pseudo=true;transl_table=11
JAGETS010000001.1	Genbank	pseudogene	145471	146995	.	-	.	ID=gene-J4731_00875;Name=J4731_00875;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_00875;pseudo=true
JAGETS010000001.1	Protein Homology	CDS	145471	146995	.	-	0	ID=cds-J4731_00875;Parent=gene-J4731_00875;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004258440.1;locus_tag=J4731_00875;product=Tar ligand binding domain-containing protein;pseudo=true;transl_table=11
JAGETS010000001.1	Genbank	gene	147484	147819	.	+	.	ID=gene-J4731_00880;Name=J4731_00880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_00880
JAGETS010000001.1	Protein Homology	CDS	147484	147819	.	+	0	ID=cds-MBO1928576.1;Parent=gene-J4731_00880;Dbxref=NCBI_GP:MBO1928576.1;Name=MBO1928576.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019335.1;locus_tag=J4731_00880;product=Plug domain-containing protein;protein_id=MBO1928576.1;transl_table=11
JAGETS010000001.1	Genbank	gene	147849	148190	.	+	.	ID=gene-J4731_00885;Name=J4731_00885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_00885
JAGETS010000001.1	Protein Homology	CDS	147849	148190	.	+	0	ID=cds-MBO1928577.1;Parent=gene-J4731_00885;Dbxref=NCBI_GP:MBO1928577.1;Name=MBO1928577.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019335.1;locus_tag=J4731_00885;product=TonB-dependent receptor plug domain-containing protein;protein_id=MBO1928577.1;transl_table=11
JAGETS010000001.1	Genbank	gene	148324	148509	.	+	.	ID=gene-J4731_00890;Name=J4731_00890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_00890
JAGETS010000001.1	GeneMarkS-2+	CDS	148324	148509	.	+	0	ID=cds-MBO1928578.1;Parent=gene-J4731_00890;Dbxref=NCBI_GP:MBO1928578.1;Name=MBO1928578.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_00890;product=hypothetical protein;protein_id=MBO1928578.1;transl_table=11
JAGETS010000001.1	Genbank	gene	149054	149371	.	+	.	ID=gene-J4731_00895;Name=J4731_00895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_00895
JAGETS010000001.1	GeneMarkS-2+	CDS	149054	149371	.	+	0	ID=cds-MBO1928579.1;Parent=gene-J4731_00895;Dbxref=NCBI_GP:MBO1928579.1;Name=MBO1928579.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_00895;product=hypothetical protein;protein_id=MBO1928579.1;transl_table=11
JAGETS010000001.1	Genbank	gene	149415	149552	.	+	.	ID=gene-J4731_00900;Name=J4731_00900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_00900
JAGETS010000001.1	GeneMarkS-2+	CDS	149415	149552	.	+	0	ID=cds-MBO1928580.1;Parent=gene-J4731_00900;Dbxref=NCBI_GP:MBO1928580.1;Name=MBO1928580.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_00900;product=hypothetical protein;protein_id=MBO1928580.1;transl_table=11
JAGETS010000001.1	Genbank	gene	149822	150184	.	+	.	ID=gene-J4731_00905;Name=J4731_00905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_00905
JAGETS010000001.1	GeneMarkS-2+	CDS	149822	150184	.	+	0	ID=cds-MBO1928581.1;Parent=gene-J4731_00905;Dbxref=NCBI_GP:MBO1928581.1;Name=MBO1928581.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_00905;product=hypothetical protein;protein_id=MBO1928581.1;transl_table=11
JAGETS010000001.1	Genbank	pseudogene	150598	151828	.	-	.	ID=gene-J4731_00910;Name=J4731_00910;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_00910;pseudo=true
JAGETS010000001.1	Protein Homology	CDS	150598	151828	.	-	0	ID=cds-J4731_00910;Parent=gene-J4731_00910;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006662888.1;locus_tag=J4731_00910;product=tryptophan permease;pseudo=true;transl_table=11
JAGETS010000001.1	Genbank	pseudogene	151892	153251	.	-	.	ID=gene-J4731_00915;Name=J4731_00915;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_00915;pseudo=true
JAGETS010000001.1	Protein Homology	CDS	151892	153251	.	-	0	ID=cds-J4731_00915;Parent=gene-J4731_00915;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006121402.1;locus_tag=J4731_00915;product=tryptophanase;pseudo=true;transl_table=11
JAGETS010000001.1	Genbank	gene	153817	154473	.	-	.	ID=gene-J4731_00920;Name=J4731_00920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_00920
JAGETS010000001.1	Protein Homology	CDS	153817	154473	.	-	0	ID=cds-MBO1928582.1;Parent=gene-J4731_00920;Dbxref=NCBI_GP:MBO1928582.1;Name=MBO1928582.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211607.1;locus_tag=J4731_00920;product=DUF799 domain-containing protein;protein_id=MBO1928582.1;transl_table=11
JAGETS010000001.1	Genbank	pseudogene	154475	154809	.	-	.	ID=gene-J4731_00925;Name=J4731_00925;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_00925;pseudo=true
JAGETS010000001.1	Protein Homology	CDS	154475	154809	.	-	0	ID=cds-J4731_00925;Parent=gene-J4731_00925;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004939531.1;locus_tag=J4731_00925;product=DUF4810 domain-containing protein;pseudo=true;transl_table=11
JAGETS010000001.1	Genbank	pseudogene	154830	155493	.	-	.	ID=gene-J4731_00930;Name=J4731_00930;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_00930;pseudo=true
JAGETS010000001.1	Protein Homology	CDS	154830	155493	.	-	0	ID=cds-J4731_00930;Parent=gene-J4731_00930;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002215847.1;locus_tag=J4731_00930;product=CsgG/HfaB family protein;pseudo=true;transl_table=11
JAGETS010000001.1	Genbank	gene	156123	156713	.	-	.	ID=gene-J4731_00935;Name=J4731_00935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_00935
JAGETS010000001.1	GeneMarkS-2+	CDS	156123	156713	.	-	0	ID=cds-MBO1928583.1;Parent=gene-J4731_00935;Dbxref=NCBI_GP:MBO1928583.1;Name=MBO1928583.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_00935;product=hypothetical protein;protein_id=MBO1928583.1;transl_table=11
JAGETS010000001.1	Genbank	gene	156776	157138	.	-	.	ID=gene-J4731_00940;Name=J4731_00940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_00940
JAGETS010000001.1	GeneMarkS-2+	CDS	156776	157138	.	-	0	ID=cds-MBO1928584.1;Parent=gene-J4731_00940;Dbxref=NCBI_GP:MBO1928584.1;Name=MBO1928584.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_00940;product=hypothetical protein;protein_id=MBO1928584.1;transl_table=11
JAGETS010000001.1	Genbank	gene	157135	157422	.	-	.	ID=gene-J4731_00945;Name=J4731_00945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_00945
JAGETS010000001.1	GeneMarkS-2+	CDS	157135	157422	.	-	0	ID=cds-MBO1928585.1;Parent=gene-J4731_00945;Dbxref=NCBI_GP:MBO1928585.1;Name=MBO1928585.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_00945;product=hypothetical protein;protein_id=MBO1928585.1;transl_table=11
JAGETS010000001.1	Genbank	gene	157788	158219	.	-	.	ID=gene-J4731_00950;Name=J4731_00950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_00950
JAGETS010000001.1	GeneMarkS-2+	CDS	157788	158219	.	-	0	ID=cds-MBO1928586.1;Parent=gene-J4731_00950;Dbxref=NCBI_GP:MBO1928586.1;Name=MBO1928586.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_00950;product=hypothetical protein;protein_id=MBO1928586.1;transl_table=11
JAGETS010000001.1	Genbank	pseudogene	158660	159371	.	+	.	ID=gene-J4731_00955;Name=J4731_00955;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_00955;pseudo=true
JAGETS010000001.1	Protein Homology	CDS	158660	159371	.	+	0	ID=cds-J4731_00955;Parent=gene-J4731_00955;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006659048.1;locus_tag=J4731_00955;product=UTRA domain-containing protein;pseudo=true;transl_table=11
JAGETS010000001.1	Genbank	pseudogene	159460	161129	.	-	.	ID=gene-J4731_00960;Name=J4731_00960;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_00960;pseudo=true
JAGETS010000001.1	Protein Homology	CDS	159460	161129	.	-	0	ID=cds-J4731_00960;Parent=gene-J4731_00960;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014657542.1;locus_tag=J4731_00960;product=electron transfer flavoprotein-ubiquinone oxidoreductase;pseudo=true;transl_table=11
JAGETS010000001.1	Genbank	pseudogene	161141	162088	.	-	.	ID=gene-J4731_00965;Name=J4731_00965;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_00965;pseudo=true
JAGETS010000001.1	Protein Homology	CDS	161141	162088	.	-	0	ID=cds-J4731_00965;Parent=gene-J4731_00965;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014657541.1;locus_tag=J4731_00965;product=FAD-binding protein;pseudo=true;transl_table=11
JAGETS010000001.1	Genbank	pseudogene	162051	162852	.	-	.	ID=gene-J4731_00970;Name=J4731_00970;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_00970;pseudo=true
JAGETS010000001.1	Protein Homology	CDS	162051	162852	.	-	0	ID=cds-J4731_00970;Parent=gene-J4731_00970;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006814279.1;locus_tag=J4731_00970;product=electron transfer flavoprotein subunit beta/FixA family protein;pseudo=true;transl_table=11
JAGETS010000001.1	Genbank	pseudogene	162991	164372	.	-	.	ID=gene-J4731_00975;Name=J4731_00975;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_00975;pseudo=true
JAGETS010000001.1	Protein Homology	CDS	162991	164372	.	-	0	ID=cds-J4731_00975;Parent=gene-J4731_00975;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009090230.1;locus_tag=J4731_00975;product=cytosine permease;pseudo=true;transl_table=11
JAGETS010000001.1	Genbank	pseudogene	164706	165825	.	-	.	ID=gene-J4731_00980;Name=J4731_00980;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_00980;pseudo=true
JAGETS010000001.1	Protein Homology	CDS	164706	165825	.	-	0	ID=cds-J4731_00980;Parent=gene-J4731_00980;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004258492.1;locus_tag=J4731_00980;product=acyl-CoA dehydrogenase family protein;pseudo=true;transl_table=11
JAGETS010000001.1	Genbank	pseudogene	165822	166998	.	-	.	ID=gene-J4731_00985;Name=J4731_00985;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_00985;pseudo=true
JAGETS010000001.1	Protein Homology	CDS	165822	166998	.	-	0	ID=cds-J4731_00985;Parent=gene-J4731_00985;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006662882.1;locus_tag=J4731_00985;product=CoA transferase;pseudo=true;transl_table=11
JAGETS010000001.1	Genbank	pseudogene	167056	168624	.	-	.	ID=gene-J4731_00990;Name=J4731_00990;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_00990;pseudo=true
JAGETS010000001.1	Protein Homology	CDS	167056	168624	.	-	0	ID=cds-J4731_00990;Parent=gene-J4731_00990;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004925682.1;locus_tag=J4731_00990;product=urocanate hydratase;pseudo=true;transl_table=11
JAGETS010000001.1	Genbank	gene	169213	169500	.	+	.	ID=gene-J4731_00995;Name=J4731_00995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_00995
JAGETS010000001.1	GeneMarkS-2+	CDS	169213	169500	.	+	0	ID=cds-MBO1928587.1;Parent=gene-J4731_00995;Dbxref=NCBI_GP:MBO1928587.1;Name=MBO1928587.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_00995;product=hypothetical protein;protein_id=MBO1928587.1;transl_table=11
JAGETS010000001.1	Genbank	gene	169629	169952	.	+	.	ID=gene-J4731_01000;Name=J4731_01000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_01000
JAGETS010000001.1	GeneMarkS-2+	CDS	169629	169952	.	+	0	ID=cds-MBO1928588.1;Parent=gene-J4731_01000;Dbxref=NCBI_GP:MBO1928588.1;Name=MBO1928588.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_01000;product=hypothetical protein;protein_id=MBO1928588.1;transl_table=11
JAGETS010000001.1	Genbank	pseudogene	170296	170954	.	-	.	ID=gene-J4731_01005;Name=J4731_01005;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_01005;pseudo=true
JAGETS010000001.1	Protein Homology	CDS	170296	170954	.	-	0	ID=cds-J4731_01005;Parent=gene-J4731_01005;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004957566.1;locus_tag=J4731_01005;product=ATP-binding cassette domain-containing protein;pseudo=true;transl_table=11
JAGETS010000001.1	Genbank	pseudogene	170938	171766	.	-	.	ID=gene-J4731_01010;Name=livG;gbkey=Gene;gene=livG;gene_biotype=pseudogene;locus_tag=J4731_01010;pseudo=true
JAGETS010000001.1	Protein Homology	CDS	170938	171766	.	-	0	ID=cds-J4731_01010;Parent=gene-J4731_01010;Note=frameshifted;gbkey=CDS;gene=livG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011148216.1;locus_tag=J4731_01010;product=high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG;pseudo=true;transl_table=11
JAGETS010000001.1	Genbank	pseudogene	171690	173027	.	-	.	ID=gene-J4731_01015;Name=J4731_01015;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_01015;pseudo=true
JAGETS010000001.1	Protein Homology	CDS	171690	173027	.	-	0	ID=cds-J4731_01015;Parent=gene-J4731_01015;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012442942.1;locus_tag=J4731_01015;product=high-affinity branched-chain amino acid ABC transporter permease LivM;pseudo=true;transl_table=11
JAGETS010000001.1	Genbank	pseudogene	173024	173939	.	-	.	ID=gene-J4731_01020;Name=livH;gbkey=Gene;gene=livH;gene_biotype=pseudogene;locus_tag=J4731_01020;pseudo=true
JAGETS010000001.1	Protein Homology	CDS	173024	173939	.	-	0	ID=cds-J4731_01020;Parent=gene-J4731_01020;Note=frameshifted;gbkey=CDS;gene=livH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010436488.1;locus_tag=J4731_01020;product=high-affinity branched-chain amino acid ABC transporter permease LivH;pseudo=true;transl_table=11
JAGETS010000001.1	Genbank	pseudogene	174042	175141	.	-	.	ID=gene-J4731_01025;Name=J4731_01025;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_01025;pseudo=true
JAGETS010000001.1	Protein Homology	CDS	174042	175141	.	-	0	ID=cds-J4731_01025;Parent=gene-J4731_01025;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000822976.1;locus_tag=J4731_01025;product=branched-chain amino acid ABC transporter substrate-binding protein;pseudo=true;transl_table=11
JAGETS010000001.1	Genbank	gene	175516	175893	.	+	.	ID=gene-J4731_01030;Name=panM;gbkey=Gene;gene=panM;gene_biotype=protein_coding;locus_tag=J4731_01030
JAGETS010000001.1	Protein Homology	CDS	175516	175893	.	+	0	ID=cds-MBO1928589.1;Parent=gene-J4731_01030;Dbxref=NCBI_GP:MBO1928589.1;Name=MBO1928589.1;gbkey=CDS;gene=panM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014657531.1;locus_tag=J4731_01030;product=aspartate 1-decarboxylase autocleavage activator PanM;protein_id=MBO1928589.1;transl_table=11
JAGETS010000001.1	Genbank	pseudogene	175910	176291	.	+	.	ID=gene-J4731_01035;Name=J4731_01035;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_01035;pseudo=true
JAGETS010000001.1	Protein Homology	CDS	175910	176291	.	+	0	ID=cds-J4731_01035;Parent=gene-J4731_01035;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004258531.1;locus_tag=J4731_01035;product=VOC family protein;pseudo=true;transl_table=11
JAGETS010000001.1	Genbank	pseudogene	176402	177274	.	-	.	ID=gene-J4731_01040;Name=rpoH;gbkey=Gene;gene=rpoH;gene_biotype=pseudogene;locus_tag=J4731_01040;pseudo=true
JAGETS010000001.1	Protein Homology	CDS	176402	177274	.	-	0	ID=cds-J4731_01040;Parent=gene-J4731_01040;Note=frameshifted;gbkey=CDS;gene=rpoH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006814293.1;locus_tag=J4731_01040;product=RNA polymerase sigma factor RpoH;pseudo=true;transl_table=11
JAGETS010000001.1	Genbank	pseudogene	177533	178499	.	-	.	ID=gene-J4731_01045;Name=ftsX;gbkey=Gene;gene=ftsX;gene_biotype=pseudogene;locus_tag=J4731_01045;pseudo=true
JAGETS010000001.1	Protein Homology	CDS	177533	178499	.	-	0	ID=cds-J4731_01045;Parent=gene-J4731_01045;Note=frameshifted%3B internal stop;gbkey=CDS;gene=ftsX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008912573.1;locus_tag=J4731_01045;product=permease-like cell division protein FtsX;pseudo=true;transl_table=11
JAGETS010000001.1	Genbank	pseudogene	178492	179155	.	-	.	ID=gene-J4731_01050;Name=ftsE;gbkey=Gene;gene=ftsE;gene_biotype=pseudogene;locus_tag=J4731_01050;pseudo=true
JAGETS010000001.1	Protein Homology	CDS	178492	179155	.	-	0	ID=cds-J4731_01050;Parent=gene-J4731_01050;Note=frameshifted%3B internal stop;gbkey=CDS;gene=ftsE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004258545.1;locus_tag=J4731_01050;product=cell division ATP-binding protein FtsE;pseudo=true;transl_table=11
JAGETS010000001.1	Genbank	pseudogene	179162	179937	.	-	.	ID=gene-J4731_01055;Name=ftsY;gbkey=Gene;gene=ftsY;gene_biotype=pseudogene;locus_tag=J4731_01055;pseudo=true
JAGETS010000001.1	Protein Homology	CDS	179162	179937	.	-	0	ID=cds-J4731_01055;Parent=gene-J4731_01055;Note=frameshifted%3B internal stop;gbkey=CDS;gene=ftsY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014657530.1;locus_tag=J4731_01055;product=signal recognition particle-docking protein FtsY;pseudo=true;transl_table=11
JAGETS010000001.1	Genbank	gene	180192	180368	.	-	.	ID=gene-J4731_01060;Name=J4731_01060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_01060
JAGETS010000001.1	GeneMarkS-2+	CDS	180192	180368	.	-	0	ID=cds-MBO1928590.1;Parent=gene-J4731_01060;Dbxref=NCBI_GP:MBO1928590.1;Name=MBO1928590.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_01060;product=hypothetical protein;protein_id=MBO1928590.1;transl_table=11
JAGETS010000001.1	Genbank	pseudogene	181221	181855	.	+	.	ID=gene-J4731_01065;Name=rsmD;gbkey=Gene;gene=rsmD;gene_biotype=pseudogene;locus_tag=J4731_01065;pseudo=true
JAGETS010000001.1	Protein Homology	CDS	181221	181855	.	+	0	ID=cds-J4731_01065;Parent=gene-J4731_01065;Note=frameshifted%3B internal stop;gbkey=CDS;gene=rsmD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004391334.1;locus_tag=J4731_01065;product=16S rRNA (guanine(966)-N(2))-methyltransferase RsmD;pseudo=true;transl_table=11
JAGETS010000001.1	Genbank	pseudogene	181797	182056	.	+	.	ID=gene-J4731_01070;Name=J4731_01070;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_01070;pseudo=true
JAGETS010000001.1	Protein Homology	CDS	181797	182056	.	+	0	ID=cds-J4731_01070;Parent=gene-J4731_01070;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006659027.1;locus_tag=J4731_01070;product=DUF1145 family protein;pseudo=true;transl_table=11
JAGETS010000001.1	Genbank	pseudogene	182094	182441	.	-	.	ID=gene-J4731_01075;Name=J4731_01075;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_01075;pseudo=true
JAGETS010000001.1	Protein Homology	CDS	182094	182441	.	-	0	ID=cds-J4731_01075;Parent=gene-J4731_01075;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004258585.1;locus_tag=J4731_01075;product=DUF2500 family protein;pseudo=true;transl_table=11
JAGETS010000001.1	Genbank	pseudogene	182566	183191	.	+	.	ID=gene-J4731_01080;Name=J4731_01080;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_01080;pseudo=true
JAGETS010000001.1	Protein Homology	CDS	182566	183191	.	+	0	ID=cds-J4731_01080;Parent=gene-J4731_01080;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006535415.1;locus_tag=J4731_01080;product=lysoplasmalogenase;pseudo=true;transl_table=11
JAGETS010000001.1	Genbank	pseudogene	183342	185735	.	+	.	ID=gene-J4731_01085;Name=J4731_01085;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_01085;pseudo=true
JAGETS010000001.1	Protein Homology	CDS	183342	185735	.	+	0	ID=cds-J4731_01085;Parent=gene-J4731_01085;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014657526.1;locus_tag=J4731_01085;product=zinc/cadmium/mercury/lead-transporting ATPase;pseudo=true;transl_table=11
JAGETS010000001.1	Genbank	pseudogene	185981	186877	.	+	.	ID=gene-J4731_01090;Name=J4731_01090;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_01090;pseudo=true
JAGETS010000001.1	Protein Homology	CDS	185981	186877	.	+	0	ID=cds-J4731_01090;Parent=gene-J4731_01090;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004259881.1;locus_tag=J4731_01090;product=Rpn family recombination-promoting nuclease/putative transposase;pseudo=true;transl_table=11
JAGETS010000001.1	Genbank	gene	186917	187177	.	-	.	ID=gene-J4731_01095;Name=tusA;gbkey=Gene;gene=tusA;gene_biotype=protein_coding;locus_tag=J4731_01095
JAGETS010000001.1	Protein Homology	CDS	186917	187177	.	-	0	ID=cds-MBO1928591.1;Parent=gene-J4731_01095;Dbxref=NCBI_GP:MBO1928591.1;Name=MBO1928591.1;gbkey=CDS;gene=tusA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462479.1;locus_tag=J4731_01095;product=sulfurtransferase TusA;protein_id=MBO1928591.1;transl_table=11
JAGETS010000001.1	Genbank	pseudogene	187344	188010	.	+	.	ID=gene-J4731_01100;Name=J4731_01100;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_01100;pseudo=true
JAGETS010000001.1	Protein Homology	CDS	187344	188010	.	+	0	ID=cds-J4731_01100;Parent=gene-J4731_01100;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004925758.1;locus_tag=J4731_01100;product=7-cyano-7-deazaguanine/7-aminomethyl-7-deazaguanine transporter;pseudo=true;transl_table=11
JAGETS010000001.1	Genbank	pseudogene	188104	189279	.	-	.	ID=gene-J4731_01105;Name=glpC;gbkey=Gene;gene=glpC;gene_biotype=pseudogene;locus_tag=J4731_01105;pseudo=true
JAGETS010000001.1	Protein Homology	CDS	188104	189279	.	-	0	ID=cds-J4731_01105;Parent=gene-J4731_01105;Note=frameshifted%3B internal stop;gbkey=CDS;gene=glpC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003027620.1;locus_tag=J4731_01105;product=anaerobic glycerol-3-phosphate dehydrogenase subunit C;pseudo=true;transl_table=11
JAGETS010000001.1	Genbank	pseudogene	189282	190572	.	-	.	ID=gene-J4731_01110;Name=glpB;gbkey=Gene;gene=glpB;gene_biotype=pseudogene;locus_tag=J4731_01110;pseudo=true
JAGETS010000001.1	Protein Homology	CDS	189282	190572	.	-	0	ID=cds-J4731_01110;Parent=gene-J4731_01110;Note=frameshifted;gbkey=CDS;gene=glpB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006814308.1;locus_tag=J4731_01110;product=glycerol-3-phosphate dehydrogenase subunit GlpB;pseudo=true;transl_table=11
JAGETS010000001.1	Genbank	pseudogene	190562	192208	.	-	.	ID=gene-J4731_01115;Name=glpA;gbkey=Gene;gene=glpA;gene_biotype=pseudogene;locus_tag=J4731_01115;pseudo=true
JAGETS010000001.1	Protein Homology	CDS	190562	192208	.	-	0	ID=cds-J4731_01115;Parent=gene-J4731_01115;Note=frameshifted;gbkey=CDS;gene=glpA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008912555.1;locus_tag=J4731_01115;product=anaerobic glycerol-3-phosphate dehydrogenase subunit A;pseudo=true;transl_table=11
JAGETS010000001.1	Genbank	pseudogene	192643	193987	.	+	.	ID=gene-J4731_01120;Name=glpT;gbkey=Gene;gene=glpT;gene_biotype=pseudogene;locus_tag=J4731_01120;pseudo=true
JAGETS010000001.1	Protein Homology	CDS	192643	193987	.	+	0	ID=cds-J4731_01120;Parent=gene-J4731_01120;Note=frameshifted;gbkey=CDS;gene=glpT;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013811065.1;locus_tag=J4731_01120;product=glycerol-3-phosphate transporter;pseudo=true;transl_table=11
JAGETS010000001.1	Genbank	pseudogene	194090	195158	.	+	.	ID=gene-J4731_01125;Name=glpQ;gbkey=Gene;gene=glpQ;gene_biotype=pseudogene;locus_tag=J4731_01125;pseudo=true
JAGETS010000001.1	Protein Homology	CDS	194090	195158	.	+	0	ID=cds-J4731_01125;Parent=gene-J4731_01125;Note=frameshifted;gbkey=CDS;gene=glpQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006659015.1;locus_tag=J4731_01125;product=glycerophosphodiester phosphodiesterase;pseudo=true;transl_table=11
JAGETS010000001.1	Genbank	pseudogene	195259	196230	.	-	.	ID=gene-J4731_01130;Name=epmA;gbkey=Gene;gene=epmA;gene_biotype=pseudogene;locus_tag=J4731_01130;pseudo=true
JAGETS010000001.1	Protein Homology	CDS	195259	196230	.	-	0	ID=cds-J4731_01130;Parent=gene-J4731_01130;Note=frameshifted;gbkey=CDS;gene=epmA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000004771.1;locus_tag=J4731_01130;product=elongation factor P--(R)-beta-lysine ligase;pseudo=true;transl_table=11
JAGETS010000001.1	Genbank	gene	197017	197700	.	+	.	ID=gene-J4731_01135;Name=J4731_01135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_01135
JAGETS010000001.1	Protein Homology	CDS	197017	197700	.	+	0	ID=cds-MBO1928592.1;Parent=gene-J4731_01135;Dbxref=NCBI_GP:MBO1928592.1;Name=MBO1928592.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013086.1;locus_tag=J4731_01135;product=FAD-binding protein;protein_id=MBO1928592.1;transl_table=11
JAGETS010000001.1	Genbank	gene	197682	197888	.	+	.	ID=gene-J4731_01140;Name=J4731_01140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_01140
JAGETS010000001.1	Protein Homology	CDS	197682	197888	.	+	0	ID=cds-MBO1928593.1;Parent=gene-J4731_01140;Dbxref=NCBI_GP:MBO1928593.1;Name=MBO1928593.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013086.1;locus_tag=J4731_01140;product=FAD-binding protein;protein_id=MBO1928593.1;transl_table=11
JAGETS010000001.1	Genbank	gene	197869	198159	.	+	.	ID=gene-J4731_01145;Name=J4731_01145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_01145
JAGETS010000001.1	Protein Homology	CDS	197869	198159	.	+	0	ID=cds-MBO1928594.1;Parent=gene-J4731_01145;Dbxref=NCBI_GP:MBO1928594.1;Name=MBO1928594.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013086.1;locus_tag=J4731_01145;product=FAD-binding protein;protein_id=MBO1928594.1;transl_table=11
JAGETS010000001.1	Genbank	gene	198176	198313	.	+	.	ID=gene-J4731_01150;Name=J4731_01150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_01150
JAGETS010000001.1	GeneMarkS-2+	CDS	198176	198313	.	+	0	ID=cds-MBO1928595.1;Parent=gene-J4731_01150;Dbxref=NCBI_GP:MBO1928595.1;Name=MBO1928595.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_01150;product=hypothetical protein;protein_id=MBO1928595.1;transl_table=11
JAGETS010000001.1	Genbank	pseudogene	198382	198813	.	+	.	ID=gene-J4731_01155;Name=J4731_01155;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_01155;pseudo=true
JAGETS010000001.1	Protein Homology	CDS	198382	198813	.	+	0	ID=cds-J4731_01155;Parent=gene-J4731_01155;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002379547.1;locus_tag=J4731_01155;product=FAD-binding dehydrogenase;pseudo=true;transl_table=11
JAGETS010000001.1	Genbank	pseudogene	198806	199537	.	+	.	ID=gene-J4731_01160;Name=J4731_01160;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_01160;pseudo=true
JAGETS010000001.1	Protein Homology	CDS	198806	199537	.	+	0	ID=cds-J4731_01160;Parent=gene-J4731_01160;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005175554.1;locus_tag=J4731_01160;product=succinate dehydrogenase/fumarate reductase iron-sulfur subunit;pseudo=true;transl_table=11
JAGETS010000001.1	Genbank	pseudogene	199582	199943	.	+	.	ID=gene-J4731_01165;Name=frdC;gbkey=Gene;gene=frdC;gene_biotype=pseudogene;locus_tag=J4731_01165;pseudo=true
JAGETS010000001.1	Protein Homology	CDS	199582	199943	.	+	0	ID=cds-J4731_01165;Parent=gene-J4731_01165;Note=frameshifted;gbkey=CDS;gene=frdC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016940763.1;locus_tag=J4731_01165;product=fumarate reductase subunit FrdC;pseudo=true;transl_table=11
JAGETS010000001.1	Genbank	pseudogene	199959	200311	.	+	.	ID=gene-J4731_01170;Name=frdD;gbkey=Gene;gene=frdD;gene_biotype=pseudogene;locus_tag=J4731_01170;pseudo=true
JAGETS010000001.1	Protein Homology	CDS	199959	200311	.	+	0	ID=cds-J4731_01170;Parent=gene-J4731_01170;Note=frameshifted;gbkey=CDS;gene=frdD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004258620.1;locus_tag=J4731_01170;product=fumarate reductase subunit FrdD;pseudo=true;transl_table=11
JAGETS010000001.1	Genbank	pseudogene	200725	200936	.	+	.	ID=gene-J4731_01175;Name=J4731_01175;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_01175;pseudo=true
JAGETS010000001.1	Protein Homology	CDS	200725	200936	.	+	0	ID=cds-J4731_01175;Parent=gene-J4731_01175;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001031679.1;locus_tag=J4731_01175;product=tetracycline resistance MFS efflux pump;pseudo=true;transl_table=11
JAGETS010000001.1	Genbank	pseudogene	201243	202412	.	-	.	ID=gene-J4731_01180;Name=J4731_01180;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_01180;pseudo=true
JAGETS010000001.1	Protein Homology	CDS	201243	202412	.	-	0	ID=cds-J4731_01180;Parent=gene-J4731_01180;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004258633.1;locus_tag=J4731_01180;product=MFS transporter;pseudo=true;transl_table=11
JAGETS010000001.1	Genbank	pseudogene	202464	203219	.	-	.	ID=gene-J4731_01185;Name=J4731_01185;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_01185;pseudo=true
JAGETS010000001.1	Protein Homology	CDS	202464	203219	.	-	0	ID=cds-J4731_01185;Parent=gene-J4731_01185;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006662862.1;locus_tag=J4731_01185;product=hypothetical protein;pseudo=true;transl_table=11
JAGETS010000001.1	Genbank	pseudogene	203235	204418	.	-	.	ID=gene-J4731_01190;Name=J4731_01190;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_01190;pseudo=true
JAGETS010000001.1	Protein Homology	CDS	203235	204418	.	-	0	ID=cds-J4731_01190;Parent=gene-J4731_01190;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004258638.1;locus_tag=J4731_01190;product=MFS transporter;pseudo=true;transl_table=11
JAGETS010000001.1	Genbank	gene	204823	205143	.	-	.	ID=gene-J4731_01195;Name=J4731_01195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_01195
JAGETS010000001.1	GeneMarkS-2+	CDS	204823	205143	.	-	0	ID=cds-MBO1928596.1;Parent=gene-J4731_01195;Dbxref=NCBI_GP:MBO1928596.1;Name=MBO1928596.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_01195;product=hypothetical protein;protein_id=MBO1928596.1;transl_table=11
JAGETS010000001.1	Genbank	pseudogene	205419	205627	.	+	.	ID=gene-J4731_01200;Name=J4731_01200;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_01200;pseudo=true
JAGETS010000001.1	Protein Homology	CDS	205419	205627	.	+	0	ID=cds-J4731_01200;Parent=gene-J4731_01200;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004258645.1;locus_tag=J4731_01200;product=helix-turn-helix domain-containing protein;pseudo=true;transl_table=11
JAGETS010000001.1	Genbank	pseudogene	205734	205990	.	-	.	ID=gene-J4731_01205;Name=J4731_01205;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_01205;pseudo=true
JAGETS010000001.1	Protein Homology	CDS	205734	205990	.	-	0	ID=cds-J4731_01205;Parent=gene-J4731_01205;Note=member of the SMR family of proton-dependent drug efflux transporters%3B quaternary ammonium compound efflux pump%3B confers resistance to cetylpyridinium%2C cetyldimethylethyl ammonium and cetrimide cations%3B frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463202.1;locus_tag=J4731_01205;product=QacE family quaternary ammonium compound efflux SMR transporter;pseudo=true;transl_table=11
JAGETS010000001.1	Genbank	pseudogene	206296	207172	.	+	.	ID=gene-J4731_01210;Name=J4731_01210;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_01210;pseudo=true
JAGETS010000001.1	Protein Homology	CDS	206296	207172	.	+	0	ID=cds-J4731_01210;Parent=gene-J4731_01210;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014657511.1;locus_tag=J4731_01210;product=EamA family transporter;pseudo=true;transl_table=11
JAGETS010000001.1	Genbank	pseudogene	207524	209595	.	+	.	ID=gene-J4731_01215;Name=cstA;gbkey=Gene;gene=cstA;gene_biotype=pseudogene;locus_tag=J4731_01215;pseudo=true
JAGETS010000001.1	Protein Homology	CDS	207524	209595	.	+	0	ID=cds-J4731_01215;Parent=gene-J4731_01215;Note=frameshifted%3B internal stop;gbkey=CDS;gene=cstA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004925834.1;locus_tag=J4731_01215;product=carbon starvation protein CstA;pseudo=true;transl_table=11
JAGETS010000001.1	Genbank	pseudogene	209842	210035	.	+	.	ID=gene-J4731_01220;Name=J4731_01220;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_01220;pseudo=true
JAGETS010000001.1	Protein Homology	CDS	209842	210035	.	+	0	ID=cds-J4731_01220;Parent=gene-J4731_01220;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225752.1;locus_tag=J4731_01220;product=YbdD/YjiX family protein;pseudo=true;transl_table=11
JAGETS010000001.1	Genbank	pseudogene	210110	210674	.	-	.	ID=gene-J4731_01225;Name=efp;gbkey=Gene;gene=efp;gene_biotype=pseudogene;locus_tag=J4731_01225;pseudo=true
JAGETS010000001.1	Protein Homology	CDS	210110	210674	.	-	0	ID=cds-J4731_01225;Parent=gene-J4731_01225;Note=frameshifted;gbkey=CDS;gene=efp;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004871142.1;locus_tag=J4731_01225;product=elongation factor P;pseudo=true;transl_table=11
JAGETS010000001.1	Genbank	pseudogene	210739	211732	.	+	.	ID=gene-J4731_01230;Name=epmB;gbkey=Gene;gene=epmB;gene_biotype=pseudogene;locus_tag=J4731_01230;pseudo=true
JAGETS010000001.1	Protein Homology	CDS	210739	211732	.	+	0	ID=cds-J4731_01230;Parent=gene-J4731_01230;Note=frameshifted;gbkey=CDS;gene=epmB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013185180.1;locus_tag=J4731_01230;product=EF-P beta-lysylation protein EpmB;pseudo=true;transl_table=11
JAGETS010000001.1	Genbank	pseudogene	211776	212118	.	-	.	ID=gene-J4731_01235;Name=J4731_01235;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_01235;pseudo=true
JAGETS010000001.1	Protein Homology	CDS	211776	212118	.	-	0	ID=cds-J4731_01235;Parent=gene-J4731_01235;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005175566.1;locus_tag=J4731_01235;product=DUF4156 domain-containing protein;pseudo=true;transl_table=11
JAGETS010000001.1	Genbank	pseudogene	212537	214176	.	-	.	ID=gene-J4731_01240;Name=groL;gbkey=Gene;gene=groL;gene_biotype=pseudogene;locus_tag=J4731_01240;pseudo=true
JAGETS010000001.1	Protein Homology	CDS	212537	214176	.	-	0	ID=cds-J4731_01240;Parent=gene-J4731_01240;Note=60 kDa chaperone family%3B promotes refolding of misfolded polypeptides especially under stressful conditions%3B forms two stacked rings of heptamers to form a barrel-shaped 14mer%3B ends can be capped by GroES%3B misfolded proteins enter the barrel where they are refolded when GroES binds%3B frameshifted;gbkey=CDS;gene=groL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120975.1;locus_tag=J4731_01240;product=chaperonin GroEL;pseudo=true;transl_table=11
JAGETS010000001.1	Genbank	pseudogene	214228	214520	.	-	.	ID=gene-J4731_01245;Name=J4731_01245;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_01245;pseudo=true
JAGETS010000001.1	Protein Homology	CDS	214228	214520	.	-	0	ID=cds-J4731_01245;Parent=gene-J4731_01245;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004391824.1;locus_tag=J4731_01245;product=co-chaperone GroES;pseudo=true;transl_table=11
JAGETS010000001.1	Genbank	pseudogene	214682	215144	.	-	.	ID=gene-J4731_01250;Name=J4731_01250;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_01250;pseudo=true
JAGETS010000001.1	Protein Homology	CDS	214682	215144	.	-	0	ID=cds-J4731_01250;Parent=gene-J4731_01250;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004258691.1;locus_tag=J4731_01250;product=FxsA family protein;pseudo=true;transl_table=11
JAGETS010000001.1	Genbank	pseudogene	215628	217024	.	+	.	ID=gene-J4731_01255;Name=aspA;gbkey=Gene;gene=aspA;gene_biotype=pseudogene;locus_tag=J4731_01255;pseudo=true
JAGETS010000001.1	Protein Homology	CDS	215628	217024	.	+	0	ID=cds-J4731_01255;Parent=gene-J4731_01255;Note=frameshifted%3B internal stop;gbkey=CDS;gene=aspA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008912525.1;locus_tag=J4731_01255;product=aspartate ammonia-lyase;pseudo=true;transl_table=11
JAGETS010000001.1	Genbank	pseudogene	217166	218454	.	+	.	ID=gene-J4731_01260;Name=J4731_01260;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_01260;pseudo=true
JAGETS010000001.1	Protein Homology	CDS	217166	218454	.	+	0	ID=cds-J4731_01260;Parent=gene-J4731_01260;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313146.1;locus_tag=J4731_01260;product=anaerobic C4-dicarboxylate transporter;pseudo=true;transl_table=11
JAGETS010000001.1	Genbank	pseudogene	219575	220141	.	+	.	ID=gene-J4731_01265;Name=J4731_01265;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_01265;pseudo=true
JAGETS010000001.1	Protein Homology	CDS	219575	220141	.	+	0	ID=cds-J4731_01265;Parent=gene-J4731_01265;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001188517.1;locus_tag=J4731_01265;product=transcriptional regulator;pseudo=true;transl_table=11
JAGETS010000001.1	Genbank	gene	220263	220335	.	+	.	ID=gene-J4731_01270;Name=J4731_01270;gbkey=Gene;gene_biotype=tRNA;locus_tag=J4731_01270
JAGETS010000001.1	tRNAscan-SE	tRNA	220263	220335	.	+	.	ID=rna-J4731_01270;Parent=gene-J4731_01270;anticodon=(pos:220296..220298);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=J4731_01270;product=tRNA-Phe
JAGETS010000001.1	tRNAscan-SE	exon	220263	220335	.	+	.	ID=exon-J4731_01270-1;Parent=rna-J4731_01270;anticodon=(pos:220296..220298);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=J4731_01270;product=tRNA-Phe
JAGETS010000001.1	Genbank	pseudogene	220528	220819	.	+	.	ID=gene-J4731_01275;Name=J4731_01275;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_01275;pseudo=true
JAGETS010000001.1	Protein Homology	CDS	220528	220819	.	+	0	ID=cds-J4731_01275;Parent=gene-J4731_01275;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001393314.1;locus_tag=J4731_01275;product=DUF4102 domain-containing protein;pseudo=true;transl_table=11
JAGETS010000001.1	Genbank	gene	221035	221445	.	+	.	ID=gene-J4731_01280;Name=J4731_01280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_01280
JAGETS010000001.1	Protein Homology	CDS	221035	221445	.	+	0	ID=cds-MBO1928597.1;Parent=gene-J4731_01280;Dbxref=NCBI_GP:MBO1928597.1;Name=MBO1928597.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012798.1;locus_tag=J4731_01280;product=tyrosine-type recombinase/integrase;protein_id=MBO1928597.1;transl_table=11
JAGETS010000001.1	Genbank	gene	221472	221786	.	+	.	ID=gene-J4731_01285;Name=J4731_01285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_01285
JAGETS010000001.1	Protein Homology	CDS	221472	221786	.	+	0	ID=cds-MBO1928598.1;Parent=gene-J4731_01285;Dbxref=NCBI_GP:MBO1928598.1;Name=MBO1928598.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012798.1;locus_tag=J4731_01285;product=hypothetical protein;protein_id=MBO1928598.1;transl_table=11
JAGETS010000001.1	Genbank	pseudogene	222686	223224	.	+	.	ID=gene-J4731_01290;Name=J4731_01290;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_01290;pseudo=true
JAGETS010000001.1	Protein Homology	CDS	222686	223224	.	+	0	ID=cds-J4731_01290;Parent=gene-J4731_01290;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004926386.1;locus_tag=J4731_01290;product=antirestriction protein ArdA;pseudo=true;transl_table=11
JAGETS010000001.1	Genbank	pseudogene	223607	225123	.	-	.	ID=gene-J4731_01295;Name=J4731_01295;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_01295;pseudo=true
JAGETS010000001.1	Protein Homology	CDS	223607	225123	.	-	0	ID=cds-J4731_01295;Parent=gene-J4731_01295;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012088182.1;locus_tag=J4731_01295;product=IS66 family transposase;pseudo=true;transl_table=11
JAGETS010000001.1	Genbank	gene	225257	225505	.	-	.	ID=gene-J4731_01300;Name=tnpB;gbkey=Gene;gene=tnpB;gene_biotype=protein_coding;locus_tag=J4731_01300
JAGETS010000001.1	Protein Homology	CDS	225257	225505	.	-	0	ID=cds-MBO1928599.1;Parent=gene-J4731_01300;Dbxref=NCBI_GP:MBO1928599.1;Name=MBO1928599.1;gbkey=CDS;gene=tnpB;inference=COORDINATES: protein motif:HMM:NF017528.1;locus_tag=J4731_01300;product=IS66 family insertion sequence element accessory protein TnpB;protein_id=MBO1928599.1;transl_table=11
JAGETS010000001.1	Genbank	gene	225546	225842	.	-	.	ID=gene-J4731_01305;Name=J4731_01305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_01305
JAGETS010000001.1	Protein Homology	CDS	225546	225842	.	-	0	ID=cds-MBO1928600.1;Parent=gene-J4731_01305;Dbxref=NCBI_GP:MBO1928600.1;Name=MBO1928600.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013785984.1;locus_tag=J4731_01305;product=IS66 family insertion sequence hypothetical protein;protein_id=MBO1928600.1;transl_table=11
JAGETS010000001.1	Genbank	gene	226126	226560	.	-	.	ID=gene-J4731_01310;Name=J4731_01310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_01310
JAGETS010000001.1	GeneMarkS-2+	CDS	226126	226560	.	-	0	ID=cds-MBO1928601.1;Parent=gene-J4731_01310;Dbxref=NCBI_GP:MBO1928601.1;Name=MBO1928601.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_01310;product=hypothetical protein;protein_id=MBO1928601.1;transl_table=11
##sequence-region JAGETS010000010.1 1 62226
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=587
JAGETS010000010.1	Genbank	region	1	62226	.	+	.	ID=JAGETS010000010.1:1..62226;Dbxref=taxon:587;collected-by=NHLS;collection-date=2018;country=South Africa: Pretoria;gbkey=Src;isolation-source=stool;lat-lon=25.7479 S 28.2293 E;mol_type=genomic DNA;nat-host=porcine;strain=SG003
JAGETS010000010.1	Genbank	pseudogene	1	2998	.	+	.	ID=gene-J4731_06300;Name=J4731_06300;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_06300;pseudo=true
JAGETS010000010.1	Protein Homology	CDS	1	2998	.	+	2	ID=cds-J4731_06300;Parent=gene-J4731_06300;Note=frameshifted%3B incomplete%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002039164.1;locus_tag=J4731_06300;product=multidrug efflux RND transporter permease subunit;pseudo=true;transl_table=11
JAGETS010000010.1	Genbank	gene	2998	3492	.	+	.	ID=gene-J4731_06305;Name=J4731_06305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_06305
JAGETS010000010.1	Protein Homology	CDS	2998	3492	.	+	0	ID=cds-MBO1928956.1;Parent=gene-J4731_06305;Dbxref=NCBI_GP:MBO1928956.1;Name=MBO1928956.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014385.1;locus_tag=J4731_06305;product=TolC family protein;protein_id=MBO1928956.1;transl_table=11
JAGETS010000010.1	Genbank	gene	3483	3776	.	+	.	ID=gene-J4731_06310;Name=J4731_06310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_06310
JAGETS010000010.1	Protein Homology	CDS	3483	3776	.	+	0	ID=cds-MBO1928957.1;Parent=gene-J4731_06310;Dbxref=NCBI_GP:MBO1928957.1;Name=MBO1928957.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014385.1;locus_tag=J4731_06310;product=hypothetical protein;protein_id=MBO1928957.1;transl_table=11
JAGETS010000010.1	Genbank	gene	3770	3925	.	+	.	ID=gene-J4731_06315;Name=J4731_06315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_06315
JAGETS010000010.1	GeneMarkS-2+	CDS	3770	3925	.	+	0	ID=cds-MBO1928958.1;Parent=gene-J4731_06315;Dbxref=NCBI_GP:MBO1928958.1;Name=MBO1928958.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_06315;product=hypothetical protein;protein_id=MBO1928958.1;transl_table=11
JAGETS010000010.1	Genbank	gene	3904	4188	.	+	.	ID=gene-J4731_06320;Name=J4731_06320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_06320
JAGETS010000010.1	Protein Homology	CDS	3904	4188	.	+	0	ID=cds-MBO1928959.1;Parent=gene-J4731_06320;Dbxref=NCBI_GP:MBO1928959.1;Name=MBO1928959.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014385.1;locus_tag=J4731_06320;product=TolC family protein;protein_id=MBO1928959.1;transl_table=11
JAGETS010000010.1	Genbank	gene	4402	4872	.	+	.	ID=gene-J4731_06325;Name=J4731_06325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_06325
JAGETS010000010.1	Protein Homology	CDS	4402	4872	.	+	0	ID=cds-MBO1928960.1;Parent=gene-J4731_06325;Dbxref=NCBI_GP:MBO1928960.1;Name=MBO1928960.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017760.1;locus_tag=J4731_06325;product=MFS transporter;protein_id=MBO1928960.1;transl_table=11
JAGETS010000010.1	Genbank	gene	4955	5671	.	+	.	ID=gene-J4731_06330;Name=J4731_06330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_06330
JAGETS010000010.1	Protein Homology	CDS	4955	5671	.	+	0	ID=cds-MBO1928961.1;Parent=gene-J4731_06330;Dbxref=NCBI_GP:MBO1928961.1;Name=MBO1928961.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017760.1;locus_tag=J4731_06330;product=MFS transporter;protein_id=MBO1928961.1;transl_table=11
JAGETS010000010.1	Genbank	gene	5946	6086	.	+	.	ID=gene-J4731_06335;Name=J4731_06335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_06335
JAGETS010000010.1	GeneMarkS-2+	CDS	5946	6086	.	+	0	ID=cds-MBO1928962.1;Parent=gene-J4731_06335;Dbxref=NCBI_GP:MBO1928962.1;Name=MBO1928962.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_06335;product=hypothetical protein;protein_id=MBO1928962.1;transl_table=11
JAGETS010000010.1	Genbank	pseudogene	6336	6674	.	-	.	ID=gene-J4731_06340;Name=J4731_06340;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_06340;pseudo=true
JAGETS010000010.1	Protein Homology	CDS	6336	6674	.	-	0	ID=cds-J4731_06340;Parent=gene-J4731_06340;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004257748.1;locus_tag=J4731_06340;product=type II toxin-antitoxin system HicB family antitoxin;pseudo=true;transl_table=11
JAGETS010000010.1	Genbank	pseudogene	6841	8262	.	-	.	ID=gene-J4731_06345;Name=hldE;gbkey=Gene;gene=hldE;gene_biotype=pseudogene;locus_tag=J4731_06345;pseudo=true
JAGETS010000010.1	Protein Homology	CDS	6841	8262	.	-	0	ID=cds-J4731_06345;Parent=gene-J4731_06345;Note=frameshifted;gbkey=CDS;gene=hldE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120911.1;locus_tag=J4731_06345;product=bifunctional D-glycero-beta-D-manno-heptose-7-phosphate kinase/D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase HldE;pseudo=true;transl_table=11
JAGETS010000010.1	Genbank	pseudogene	8354	9656	.	-	.	ID=gene-J4731_06350;Name=glnE;gbkey=Gene;gene=glnE;gene_biotype=pseudogene;locus_tag=J4731_06350;pseudo=true
JAGETS010000010.1	Protein Homology	CDS	8354	9656	.	-	0	ID=cds-J4731_06350;Parent=gene-J4731_06350;Note=frameshifted%3B internal stop;gbkey=CDS;gene=glnE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013027250.1;locus_tag=J4731_06350;product=bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase;pseudo=true;transl_table=11
JAGETS010000010.1	Genbank	pseudogene	9764	11152	.	-	.	ID=gene-J4731_06355;Name=glnE;gbkey=Gene;gene=glnE;gene_biotype=pseudogene;locus_tag=J4731_06355;pseudo=true
JAGETS010000010.1	Protein Homology	CDS	9764	11152	.	-	0	ID=cds-J4731_06355;Parent=gene-J4731_06355;Note=frameshifted;gbkey=CDS;gene=glnE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001501448.1;locus_tag=J4731_06355;product=bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase;pseudo=true;transl_table=11
JAGETS010000010.1	Genbank	pseudogene	11165	12114	.	-	.	ID=gene-J4731_06360;Name=J4731_06360;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_06360;pseudo=true
JAGETS010000010.1	Protein Homology	CDS	11165	12114	.	-	0	ID=cds-J4731_06360;Parent=gene-J4731_06360;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004925160.1;locus_tag=J4731_06360;product=inorganic triphosphatase;pseudo=true;transl_table=11
JAGETS010000010.1	Genbank	pseudogene	12396	13006	.	+	.	ID=gene-J4731_06365;Name=J4731_06365;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_06365;pseudo=true
JAGETS010000010.1	Protein Homology	CDS	12396	13006	.	+	0	ID=cds-J4731_06365;Parent=gene-J4731_06365;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006814125.1;locus_tag=J4731_06365;product=SH3 domain-containing protein;pseudo=true;transl_table=11
JAGETS010000010.1	Genbank	pseudogene	13021	14233	.	+	.	ID=gene-J4731_06370;Name=J4731_06370;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_06370;pseudo=true
JAGETS010000010.1	Protein Homology	CDS	13021	14233	.	+	0	ID=cds-J4731_06370;Parent=gene-J4731_06370;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006659186.1;locus_tag=J4731_06370;product=multifunctional CCA addition/repair protein;pseudo=true;transl_table=11
JAGETS010000010.1	Genbank	pseudogene	14273	14625	.	-	.	ID=gene-J4731_06375;Name=folB;gbkey=Gene;gene=folB;gene_biotype=pseudogene;locus_tag=J4731_06375;pseudo=true
JAGETS010000010.1	Protein Homology	CDS	14273	14625	.	-	0	ID=cds-J4731_06375;Parent=gene-J4731_06375;Note=frameshifted;gbkey=CDS;gene=folB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004925173.1;locus_tag=J4731_06375;product=bifunctional dihydroneopterin aldolase/7%2C8-dihydroneopterin epimerase;pseudo=true;transl_table=11
JAGETS010000010.1	Genbank	pseudogene	14733	15314	.	+	.	ID=gene-J4731_06380;Name=plsY;gbkey=Gene;gene=plsY;gene_biotype=pseudogene;locus_tag=J4731_06380;pseudo=true
JAGETS010000010.1	Protein Homology	CDS	14733	15314	.	+	0	ID=cds-J4731_06380;Parent=gene-J4731_06380;Note=frameshifted;gbkey=CDS;gene=plsY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006328190.1;locus_tag=J4731_06380;product=glycerol-3-phosphate 1-O-acyltransferase PlsY;pseudo=true;transl_table=11
JAGETS010000010.1	Genbank	pseudogene	15651	17178	.	+	.	ID=gene-J4731_06385;Name=J4731_06385;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_06385;pseudo=true
JAGETS010000010.1	Protein Homology	CDS	15651	17178	.	+	0	ID=cds-J4731_06385;Parent=gene-J4731_06385;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000094721.1;locus_tag=J4731_06385;product=PAS domain-containing protein;pseudo=true;transl_table=11
JAGETS010000010.1	Genbank	pseudogene	17247	18263	.	-	.	ID=gene-J4731_06390;Name=tsaD;gbkey=Gene;gene=tsaD;gene_biotype=pseudogene;locus_tag=J4731_06390;pseudo=true
JAGETS010000010.1	Protein Homology	CDS	17247	18263	.	-	0	ID=cds-J4731_06390;Parent=gene-J4731_06390;Note=frameshifted;gbkey=CDS;gene=tsaD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004245584.1;locus_tag=J4731_06390;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD;pseudo=true;transl_table=11
JAGETS010000010.1	Genbank	pseudogene	18592	18806	.	+	.	ID=gene-J4731_06395;Name=rpsU;gbkey=Gene;gene=rpsU;gene_biotype=pseudogene;locus_tag=J4731_06395;pseudo=true
JAGETS010000010.1	Protein Homology	CDS	18592	18806	.	+	0	ID=cds-J4731_06395;Parent=gene-J4731_06395;Note=frameshifted;gbkey=CDS;gene=rpsU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311975.1;locus_tag=J4731_06395;product=30S ribosomal protein S21;pseudo=true;transl_table=11
JAGETS010000010.1	Genbank	pseudogene	18976	20701	.	+	.	ID=gene-J4731_06400;Name=dnaG;gbkey=Gene;gene=dnaG;gene_biotype=pseudogene;locus_tag=J4731_06400;pseudo=true
JAGETS010000010.1	Protein Homology	CDS	18976	20701	.	+	0	ID=cds-J4731_06400;Parent=gene-J4731_06400;Note=frameshifted%3B internal stop;gbkey=CDS;gene=dnaG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008912707.1;locus_tag=J4731_06400;product=DNA primase;pseudo=true;transl_table=11
JAGETS010000010.1	Genbank	pseudogene	20889	22736	.	+	.	ID=gene-J4731_06405;Name=rpoD;gbkey=Gene;gene=rpoD;gene_biotype=pseudogene;locus_tag=J4731_06405;pseudo=true
JAGETS010000010.1	Protein Homology	CDS	20889	22736	.	+	0	ID=cds-J4731_06405;Parent=gene-J4731_06405;Note=frameshifted;gbkey=CDS;gene=rpoD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228906.1;locus_tag=J4731_06405;product=RNA polymerase sigma factor RpoD;pseudo=true;transl_table=11
JAGETS010000010.1	Genbank	pseudogene	22805	23193	.	-	.	ID=gene-J4731_06410;Name=J4731_06410;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_06410;pseudo=true
JAGETS010000010.1	Protein Homology	CDS	22805	23193	.	-	0	ID=cds-J4731_06410;Parent=gene-J4731_06410;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004257803.1;locus_tag=J4731_06410;product=hypothetical protein;pseudo=true;transl_table=11
JAGETS010000010.1	Genbank	gene	23190	23399	.	-	.	ID=gene-J4731_06415;Name=J4731_06415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_06415
JAGETS010000010.1	GeneMarkS-2+	CDS	23190	23399	.	-	0	ID=cds-MBO1928963.1;Parent=gene-J4731_06415;Dbxref=NCBI_GP:MBO1928963.1;Name=MBO1928963.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_06415;product=hypothetical protein;protein_id=MBO1928963.1;transl_table=11
JAGETS010000010.1	Genbank	gene	23771	24283	.	-	.	ID=gene-J4731_06420;Name=J4731_06420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_06420
JAGETS010000010.1	Protein Homology	CDS	23771	24283	.	-	0	ID=cds-MBO1928964.1;Parent=gene-J4731_06420;Dbxref=NCBI_GP:MBO1928964.1;Name=MBO1928964.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019310.1;locus_tag=J4731_06420;product=MFS transporter;protein_id=MBO1928964.1;transl_table=11
JAGETS010000010.1	Genbank	gene	24231	24482	.	-	.	ID=gene-J4731_06425;Name=J4731_06425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_06425
JAGETS010000010.1	GeneMarkS-2+	CDS	24231	24482	.	-	0	ID=cds-MBO1928965.1;Parent=gene-J4731_06425;Dbxref=NCBI_GP:MBO1928965.1;Name=MBO1928965.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_06425;product=hypothetical protein;protein_id=MBO1928965.1;transl_table=11
JAGETS010000010.1	Genbank	pseudogene	24598	25458	.	+	.	ID=gene-J4731_06430;Name=J4731_06430;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_06430;pseudo=true
JAGETS010000010.1	Protein Homology	CDS	24598	25458	.	+	0	ID=cds-J4731_06430;Parent=gene-J4731_06430;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004925219.1;locus_tag=J4731_06430;product=LysR family transcriptional regulator;pseudo=true;transl_table=11
JAGETS010000010.1	Genbank	pseudogene	25590	25887	.	-	.	ID=gene-J4731_06435;Name=J4731_06435;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_06435;pseudo=true
JAGETS010000010.1	Protein Homology	CDS	25590	25887	.	-	0	ID=cds-J4731_06435;Parent=gene-J4731_06435;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014657621.1;locus_tag=J4731_06435;product=ABC transporter substrate-binding protein;pseudo=true;transl_table=11
JAGETS010000010.1	Genbank	pseudogene	26117	27402	.	-	.	ID=gene-J4731_06440;Name=J4731_06440;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_06440;pseudo=true
JAGETS010000010.1	Protein Homology	CDS	26117	27402	.	-	0	ID=cds-J4731_06440;Parent=gene-J4731_06440;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004257818.1;locus_tag=J4731_06440;product=MFS transporter;pseudo=true;transl_table=11
JAGETS010000010.1	Genbank	pseudogene	27496	27954	.	-	.	ID=gene-J4731_06445;Name=J4731_06445;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_06445;pseudo=true
JAGETS010000010.1	Protein Homology	CDS	27496	27954	.	-	0	ID=cds-J4731_06445;Parent=gene-J4731_06445;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004257820.1;locus_tag=J4731_06445;product=RidA family protein;pseudo=true;transl_table=11
JAGETS010000010.1	Genbank	pseudogene	27964	29120	.	-	.	ID=gene-J4731_06450;Name=J4731_06450;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_06450;pseudo=true
JAGETS010000010.1	Protein Homology	CDS	27964	29120	.	-	0	ID=cds-J4731_06450;Parent=gene-J4731_06450;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004257824.1;locus_tag=J4731_06450;product=M20 family metallopeptidase;pseudo=true;transl_table=11
JAGETS010000010.1	Genbank	pseudogene	29136	30194	.	-	.	ID=gene-J4731_06455;Name=J4731_06455;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_06455;pseudo=true
JAGETS010000010.1	Protein Homology	CDS	29136	30194	.	-	0	ID=cds-J4731_06455;Parent=gene-J4731_06455;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004113127.1;locus_tag=J4731_06455;product=alanine racemase;pseudo=true;transl_table=11
JAGETS010000010.1	Genbank	pseudogene	30206	30859	.	-	.	ID=gene-J4731_06460;Name=J4731_06460;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_06460;pseudo=true
JAGETS010000010.1	Protein Homology	CDS	30206	30859	.	-	0	ID=cds-J4731_06460;Parent=gene-J4731_06460;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004257829.1;locus_tag=J4731_06460;product=transcriptional regulator;pseudo=true;transl_table=11
JAGETS010000010.1	Genbank	pseudogene	31141	32237	.	-	.	ID=gene-J4731_06465;Name=J4731_06465;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_06465;pseudo=true
JAGETS010000010.1	Protein Homology	CDS	31141	32237	.	-	0	ID=cds-J4731_06465;Parent=gene-J4731_06465;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014657623.1;locus_tag=J4731_06465;product=ABC transporter substrate-binding protein;pseudo=true;transl_table=11
JAGETS010000010.1	Genbank	pseudogene	32320	34377	.	-	.	ID=gene-J4731_06470;Name=J4731_06470;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_06470;pseudo=true
JAGETS010000010.1	Protein Homology	CDS	32320	34377	.	-	0	ID=cds-J4731_06470;Parent=gene-J4731_06470;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001396796.1;locus_tag=J4731_06470;product=TonB-dependent siderophore receptor;pseudo=true;transl_table=11
JAGETS010000010.1	Genbank	pseudogene	34721	35485	.	-	.	ID=gene-J4731_06475;Name=J4731_06475;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_06475;pseudo=true
JAGETS010000010.1	Protein Homology	CDS	34721	35485	.	-	0	ID=cds-J4731_06475;Parent=gene-J4731_06475;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004237519.1;locus_tag=J4731_06475;product=methyltransferase domain-containing protein;pseudo=true;transl_table=11
JAGETS010000010.1	Genbank	pseudogene	35499	35844	.	-	.	ID=gene-J4731_06480;Name=J4731_06480;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_06480;pseudo=true
JAGETS010000010.1	Protein Homology	CDS	35499	35844	.	-	0	ID=cds-J4731_06480;Parent=gene-J4731_06480;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004257847.1;locus_tag=J4731_06480;product=cupin domain-containing protein;pseudo=true;transl_table=11
JAGETS010000010.1	Genbank	pseudogene	35877	36376	.	-	.	ID=gene-J4731_06485;Name=J4731_06485;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_06485;pseudo=true
JAGETS010000010.1	Protein Homology	CDS	35877	36376	.	-	0	ID=cds-J4731_06485;Parent=gene-J4731_06485;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010990125.1;locus_tag=J4731_06485;product=ABC transporter ATP-binding protein;pseudo=true;transl_table=11
JAGETS010000010.1	Genbank	pseudogene	36370	36533	.	-	.	ID=gene-J4731_06490;Name=J4731_06490;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_06490;pseudo=true
JAGETS010000010.1	Protein Homology	CDS	36370	36533	.	-	0	ID=cds-J4731_06490;Parent=gene-J4731_06490;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014578679.1;locus_tag=J4731_06490;product=ATP-binding cassette domain-containing protein;pseudo=true;transl_table=11
JAGETS010000010.1	Genbank	pseudogene	36611	37622	.	-	.	ID=gene-J4731_06495;Name=J4731_06495;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_06495;pseudo=true
JAGETS010000010.1	Protein Homology	CDS	36611	37622	.	-	0	ID=cds-J4731_06495;Parent=gene-J4731_06495;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004257854.1;locus_tag=J4731_06495;product=iron ABC transporter permease;pseudo=true;transl_table=11
JAGETS010000010.1	Genbank	pseudogene	37571	38690	.	-	.	ID=gene-J4731_06500;Name=J4731_06500;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_06500;pseudo=true
JAGETS010000010.1	Protein Homology	CDS	37571	38690	.	-	0	ID=cds-J4731_06500;Parent=gene-J4731_06500;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004237523.1;locus_tag=J4731_06500;product=ABC transporter substrate-binding protein;pseudo=true;transl_table=11
JAGETS010000010.1	Genbank	pseudogene	38785	39486	.	+	.	ID=gene-J4731_06505;Name=J4731_06505;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_06505;pseudo=true
JAGETS010000010.1	Protein Homology	CDS	38785	39486	.	+	0	ID=cds-J4731_06505;Parent=gene-J4731_06505;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004257865.1;locus_tag=J4731_06505;product=Crp/Fnr family transcriptional regulator;pseudo=true;transl_table=11
JAGETS010000010.1	Genbank	pseudogene	39536	41559	.	-	.	ID=gene-J4731_06510;Name=J4731_06510;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_06510;pseudo=true
JAGETS010000010.1	Protein Homology	CDS	39536	41559	.	-	0	ID=cds-J4731_06510;Parent=gene-J4731_06510;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004237525.1;locus_tag=J4731_06510;product=TonB-dependent receptor;pseudo=true;transl_table=11
JAGETS010000010.1	Genbank	gene	42517	42885	.	+	.	ID=gene-J4731_06515;Name=J4731_06515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_06515
JAGETS010000010.1	GeneMarkS-2+	CDS	42517	42885	.	+	0	ID=cds-MBO1928966.1;Parent=gene-J4731_06515;Dbxref=NCBI_GP:MBO1928966.1;Name=MBO1928966.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_06515;product=hypothetical protein;protein_id=MBO1928966.1;transl_table=11
JAGETS010000010.1	Genbank	gene	43071	43355	.	+	.	ID=gene-J4731_06520;Name=J4731_06520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_06520
JAGETS010000010.1	Protein Homology	CDS	43071	43355	.	+	0	ID=cds-MBO1928967.1;Parent=gene-J4731_06520;Dbxref=NCBI_GP:MBO1928967.1;Name=MBO1928967.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012311.1;locus_tag=J4731_06520;product=S8 family serine peptidase;protein_id=MBO1928967.1;transl_table=11
JAGETS010000010.1	Genbank	pseudogene	43413	43992	.	-	.	ID=gene-J4731_06525;Name=J4731_06525;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_06525;pseudo=true
JAGETS010000010.1	Protein Homology	CDS	43413	43992	.	-	0	ID=cds-J4731_06525;Parent=gene-J4731_06525;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008912442.1;locus_tag=J4731_06525;product=ATP-binding cassette domain-containing protein;pseudo=true;transl_table=11
JAGETS010000010.1	Genbank	pseudogene	43989	44758	.	-	.	ID=gene-J4731_06530;Name=J4731_06530;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_06530;pseudo=true
JAGETS010000010.1	Protein Homology	CDS	43989	44758	.	-	0	ID=cds-J4731_06530;Parent=gene-J4731_06530;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012229969.1;locus_tag=J4731_06530;product=ATP-binding cassette domain-containing protein;pseudo=true;transl_table=11
JAGETS010000010.1	Genbank	gene	44768	45508	.	-	.	ID=gene-J4731_06535;Name=J4731_06535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_06535
JAGETS010000010.1	Protein Homology	CDS	44768	45508	.	-	0	ID=cds-MBO1928968.1;Parent=gene-J4731_06535;Dbxref=NCBI_GP:MBO1928968.1;Name=MBO1928968.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012738.1;locus_tag=J4731_06535;product=ABC transporter permease;protein_id=MBO1928968.1;transl_table=11
JAGETS010000010.1	Genbank	pseudogene	45573	46502	.	-	.	ID=gene-J4731_06540;Name=J4731_06540;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_06540;pseudo=true
JAGETS010000010.1	Protein Homology	CDS	45573	46502	.	-	0	ID=cds-J4731_06540;Parent=gene-J4731_06540;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004242095.1;locus_tag=J4731_06540;product=ABC transporter permease;pseudo=true;transl_table=11
JAGETS010000010.1	Genbank	pseudogene	46502	48065	.	-	.	ID=gene-J4731_06545;Name=J4731_06545;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_06545;pseudo=true
JAGETS010000010.1	Protein Homology	CDS	46502	48065	.	-	0	ID=cds-J4731_06545;Parent=gene-J4731_06545;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006659171.1;locus_tag=J4731_06545;product=ABC transporter substrate-binding protein;pseudo=true;transl_table=11
JAGETS010000010.1	Genbank	pseudogene	48275	49101	.	-	.	ID=gene-J4731_06550;Name=J4731_06550;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_06550;pseudo=true
JAGETS010000010.1	Protein Homology	CDS	48275	49101	.	-	0	ID=cds-J4731_06550;Parent=gene-J4731_06550;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004248932.1;locus_tag=J4731_06550;product=helix-turn-helix transcriptional regulator;pseudo=true;transl_table=11
JAGETS010000010.1	Genbank	pseudogene	49616	50407	.	+	.	ID=gene-J4731_06555;Name=J4731_06555;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_06555;pseudo=true
JAGETS010000010.1	Protein Homology	CDS	49616	50407	.	+	0	ID=cds-J4731_06555;Parent=gene-J4731_06555;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004248933.1;locus_tag=J4731_06555;product=urease accessory protein UreD;pseudo=true;transl_table=11
JAGETS010000010.1	Genbank	pseudogene	50431	50724	.	+	.	ID=gene-J4731_06560;Name=J4731_06560;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_06560;pseudo=true
JAGETS010000010.1	Protein Homology	CDS	50431	50724	.	+	0	ID=cds-J4731_06560;Parent=gene-J4731_06560;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000422460.1;locus_tag=J4731_06560;product=urease subunit gamma;pseudo=true;transl_table=11
JAGETS010000010.1	Genbank	gene	50733	51056	.	+	.	ID=gene-J4731_06565;Name=J4731_06565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_06565
JAGETS010000010.1	Protein Homology	CDS	50733	51056	.	+	0	ID=cds-MBO1928969.1;Parent=gene-J4731_06565;Dbxref=NCBI_GP:MBO1928969.1;Name=MBO1928969.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004257906.1;locus_tag=J4731_06565;product=urease subunit beta;protein_id=MBO1928969.1;transl_table=11
JAGETS010000010.1	Genbank	pseudogene	51059	52739	.	+	.	ID=gene-J4731_06570;Name=ureC;gbkey=Gene;gene=ureC;gene_biotype=pseudogene;locus_tag=J4731_06570;pseudo=true
JAGETS010000010.1	Protein Homology	CDS	51059	52739	.	+	0	ID=cds-J4731_06570;Parent=gene-J4731_06570;Note=frameshifted%3B internal stop;gbkey=CDS;gene=ureC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006535306.1;locus_tag=J4731_06570;product=urease subunit alpha;pseudo=true;transl_table=11
JAGETS010000010.1	Genbank	pseudogene	52774	53217	.	+	.	ID=gene-J4731_06575;Name=ureE;gbkey=Gene;gene=ureE;gene_biotype=pseudogene;locus_tag=J4731_06575;pseudo=true
JAGETS010000010.1	Protein Homology	CDS	52774	53217	.	+	0	ID=cds-J4731_06575;Parent=gene-J4731_06575;Note=frameshifted;gbkey=CDS;gene=ureE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004245261.1;locus_tag=J4731_06575;product=urease accessory protein UreE;pseudo=true;transl_table=11
JAGETS010000010.1	Genbank	pseudogene	53238	53885	.	+	.	ID=gene-J4731_06580;Name=J4731_06580;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_06580;pseudo=true
JAGETS010000010.1	Protein Homology	CDS	53238	53885	.	+	0	ID=cds-J4731_06580;Parent=gene-J4731_06580;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004248934.1;locus_tag=J4731_06580;product=urease accessory protein UreF;pseudo=true;transl_table=11
JAGETS010000010.1	Genbank	pseudogene	53895	54503	.	+	.	ID=gene-J4731_06585;Name=ureG;gbkey=Gene;gene=ureG;gene_biotype=pseudogene;locus_tag=J4731_06585;pseudo=true
JAGETS010000010.1	Protein Homology	CDS	53895	54503	.	+	0	ID=cds-J4731_06585;Parent=gene-J4731_06585;Note=frameshifted%3B internal stop;gbkey=CDS;gene=ureG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004257918.1;locus_tag=J4731_06585;product=urease accessory protein UreG;pseudo=true;transl_table=11
JAGETS010000010.1	Genbank	pseudogene	54543	55448	.	-	.	ID=gene-J4731_06590;Name=hypE;gbkey=Gene;gene=hypE;gene_biotype=pseudogene;locus_tag=J4731_06590;pseudo=true
JAGETS010000010.1	Protein Homology	CDS	54543	55448	.	-	0	ID=cds-J4731_06590;Parent=gene-J4731_06590;Note=frameshifted;gbkey=CDS;gene=hypE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005173931.1;locus_tag=J4731_06590;product=hydrogenase expression/formation protein HypE;pseudo=true;transl_table=11
JAGETS010000010.1	Genbank	pseudogene	55560	56662	.	-	.	ID=gene-J4731_06595;Name=hypD;gbkey=Gene;gene=hypD;gene_biotype=pseudogene;locus_tag=J4731_06595;pseudo=true
JAGETS010000010.1	Protein Homology	CDS	55560	56662	.	-	0	ID=cds-J4731_06595;Parent=gene-J4731_06595;Note=frameshifted;gbkey=CDS;gene=hypD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008912436.1;locus_tag=J4731_06595;product=hydrogenase formation protein HypD;pseudo=true;transl_table=11
JAGETS010000010.1	Genbank	pseudogene	56646	56968	.	-	.	ID=gene-J4731_06600;Name=hybG;gbkey=Gene;gene=hybG;gene_biotype=pseudogene;locus_tag=J4731_06600;pseudo=true
JAGETS010000010.1	Protein Homology	CDS	56646	56968	.	-	0	ID=cds-J4731_06600;Parent=gene-J4731_06600;Note=frameshifted;gbkey=CDS;gene=hybG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006659168.1;locus_tag=J4731_06600;product=hydrogenase maturation factor HybG;pseudo=true;transl_table=11
JAGETS010000010.1	Genbank	pseudogene	56901	57946	.	-	.	ID=gene-J4731_06605;Name=hypB;gbkey=Gene;gene=hypB;gene_biotype=pseudogene;locus_tag=J4731_06605;pseudo=true
JAGETS010000010.1	Protein Homology	CDS	56901	57946	.	-	0	ID=cds-J4731_06605;Parent=gene-J4731_06605;Note=frameshifted;gbkey=CDS;gene=hypB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004257932.1;locus_tag=J4731_06605;product=hydrogenase nickel incorporation protein HypB;pseudo=true;transl_table=11
JAGETS010000010.1	Genbank	pseudogene	58036	58376	.	-	.	ID=gene-J4731_06610;Name=hypA;gbkey=Gene;gene=hypA;gene_biotype=pseudogene;locus_tag=J4731_06610;pseudo=true
JAGETS010000010.1	Protein Homology	CDS	58036	58376	.	-	0	ID=cds-J4731_06610;Parent=gene-J4731_06610;Note=frameshifted;gbkey=CDS;gene=hypA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004257935.1;locus_tag=J4731_06610;product=hydrogenase maturation nickel metallochaperone HypA;pseudo=true;transl_table=11
JAGETS010000010.1	Genbank	pseudogene	58369	58855	.	-	.	ID=gene-J4731_06615;Name=hybE;gbkey=Gene;gene=hybE;gene_biotype=pseudogene;locus_tag=J4731_06615;pseudo=true
JAGETS010000010.1	Protein Homology	CDS	58369	58855	.	-	0	ID=cds-J4731_06615;Parent=gene-J4731_06615;Note=frameshifted;gbkey=CDS;gene=hybE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004257937.1;locus_tag=J4731_06615;product=hydrogenase-2 assembly chaperone;pseudo=true;transl_table=11
JAGETS010000010.1	Genbank	pseudogene	58845	59339	.	-	.	ID=gene-J4731_06620;Name=J4731_06620;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_06620;pseudo=true
JAGETS010000010.1	Protein Homology	CDS	58845	59339	.	-	0	ID=cds-J4731_06620;Parent=gene-J4731_06620;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004257940.1;locus_tag=J4731_06620;product=HyaD/HybD family hydrogenase maturation endopeptidase;pseudo=true;transl_table=11
JAGETS010000010.1	Genbank	pseudogene	59339	61032	.	-	.	ID=gene-J4731_06625;Name=hybC;gbkey=Gene;gene=hybC;gene_biotype=pseudogene;locus_tag=J4731_06625;pseudo=true
JAGETS010000010.1	Protein Homology	CDS	59339	61032	.	-	0	ID=cds-J4731_06625;Parent=gene-J4731_06625;Note=frameshifted%3B internal stop;gbkey=CDS;gene=hybC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311906.1;locus_tag=J4731_06625;product=hydrogenase 2 large subunit;pseudo=true;transl_table=11
JAGETS010000010.1	Genbank	pseudogene	61058	62152	.	-	.	ID=gene-J4731_06630;Name=hybB;gbkey=Gene;gene=hybB;gene_biotype=pseudogene;locus_tag=J4731_06630;pseudo=true
JAGETS010000010.1	Protein Homology	CDS	61058	62152	.	-	0	ID=cds-J4731_06630;Parent=gene-J4731_06630;Note=frameshifted%3B internal stop;gbkey=CDS;gene=hybB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462063.1;locus_tag=J4731_06630;product=Ni/Fe-hydrogenase cytochrome b subunit;pseudo=true;transl_table=11
##sequence-region JAGETS010000100.1 1 8986
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=587
JAGETS010000100.1	Genbank	region	1	8986	.	+	.	ID=JAGETS010000100.1:1..8986;Dbxref=taxon:587;collected-by=NHLS;collection-date=2018;country=South Africa: Pretoria;gbkey=Src;isolation-source=stool;lat-lon=25.7479 S 28.2293 E;mol_type=genomic DNA;nat-host=porcine;strain=SG003
JAGETS010000100.1	Genbank	pseudogene	1	1050	.	-	.	ID=gene-J4731_24325;Name=J4731_24325;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_24325;pseudo=true
JAGETS010000100.1	Protein Homology	CDS	1	1050	.	-	0	ID=cds-J4731_24325;Parent=gene-J4731_24325;Note=frameshifted%3B internal stop%3B incomplete%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709576.1;locus_tag=J4731_24325;product=dihydroxy-acid dehydratase;pseudo=true;transl_table=11
JAGETS010000100.1	Genbank	pseudogene	1106	1993	.	-	.	ID=gene-J4731_24330;Name=J4731_24330;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_24330;pseudo=true
JAGETS010000100.1	Protein Homology	CDS	1106	1993	.	-	0	ID=cds-J4731_24330;Parent=gene-J4731_24330;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005279322.1;locus_tag=J4731_24330;product=branched-chain amino acid transaminase;pseudo=true;transl_table=11
JAGETS010000100.1	Genbank	pseudogene	2005	2265	.	-	.	ID=gene-J4731_24335;Name=ilvM;gbkey=Gene;gene=ilvM;gene_biotype=pseudogene;locus_tag=J4731_24335;pseudo=true
JAGETS010000100.1	Protein Homology	CDS	2005	2265	.	-	0	ID=cds-J4731_24335;Parent=gene-J4731_24335;Note=frameshifted;gbkey=CDS;gene=ilvM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006814629.1;locus_tag=J4731_24335;product=acetolactate synthase 2 small subunit;pseudo=true;transl_table=11
JAGETS010000100.1	Genbank	pseudogene	2262	3897	.	-	.	ID=gene-J4731_24340;Name=J4731_24340;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_24340;pseudo=true
JAGETS010000100.1	Protein Homology	CDS	2262	3897	.	-	0	ID=cds-J4731_24340;Parent=gene-J4731_24340;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006814630.1;locus_tag=J4731_24340;product=acetolactate synthase 2 catalytic subunit;pseudo=true;transl_table=11
JAGETS010000100.1	Genbank	gene	4025	4126	.	-	.	ID=gene-J4731_24345;Name=ilvL;gbkey=Gene;gene=ilvL;gene_biotype=protein_coding;locus_tag=J4731_24345
JAGETS010000100.1	Protein Homology	CDS	4025	4126	.	-	0	ID=cds-MBO1929969.1;Parent=gene-J4731_24345;Dbxref=NCBI_GP:MBO1929969.1;Name=MBO1929969.1;gbkey=CDS;gene=ilvL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001639354.1;locus_tag=J4731_24345;product=ilv operon leader peptide;protein_id=MBO1929969.1;transl_table=11
JAGETS010000100.1	Genbank	pseudogene	4603	6119	.	+	.	ID=gene-J4731_24350;Name=J4731_24350;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_24350;pseudo=true
JAGETS010000100.1	Protein Homology	CDS	4603	6119	.	+	0	ID=cds-J4731_24350;Parent=gene-J4731_24350;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006658223.1;locus_tag=J4731_24350;product=YifB family Mg chelatase-like AAA ATPase;pseudo=true;transl_table=11
JAGETS010000100.1	Genbank	pseudogene	6195	6526	.	-	.	ID=gene-J4731_24355;Name=J4731_24355;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_24355;pseudo=true
JAGETS010000100.1	Protein Homology	CDS	6195	6526	.	-	0	ID=cds-J4731_24355;Parent=gene-J4731_24355;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312726.1;locus_tag=J4731_24355;product=DUF413 domain-containing protein;pseudo=true;transl_table=11
JAGETS010000100.1	Genbank	pseudogene	6639	7471	.	+	.	ID=gene-J4731_24360;Name=hdfR;gbkey=Gene;gene=hdfR;gene_biotype=pseudogene;locus_tag=J4731_24360;pseudo=true
JAGETS010000100.1	Protein Homology	CDS	6639	7471	.	+	0	ID=cds-J4731_24360;Parent=gene-J4731_24360;Note=frameshifted;gbkey=CDS;gene=hdfR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004906133.1;locus_tag=J4731_24360;product=HTH-type transcriptional regulator HdfR;pseudo=true;transl_table=11
JAGETS010000100.1	Genbank	gene	8035	8110	.	-	.	ID=gene-J4731_24365;Name=J4731_24365;gbkey=Gene;gene_biotype=tRNA;locus_tag=J4731_24365
JAGETS010000100.1	tRNAscan-SE	tRNA	8035	8110	.	-	.	ID=rna-J4731_24365;Parent=gene-J4731_24365;anticodon=(pos:complement(8075..8077));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=J4731_24365;product=tRNA-Trp
JAGETS010000100.1	tRNAscan-SE	exon	8035	8110	.	-	.	ID=exon-J4731_24365-1;Parent=rna-J4731_24365;anticodon=(pos:complement(8075..8077));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=J4731_24365;product=tRNA-Trp
JAGETS010000100.1	Genbank	gene	8119	8195	.	-	.	ID=gene-J4731_24370;Name=J4731_24370;gbkey=Gene;gene_biotype=tRNA;locus_tag=J4731_24370
JAGETS010000100.1	tRNAscan-SE	tRNA	8119	8195	.	-	.	ID=rna-J4731_24370;Parent=gene-J4731_24370;anticodon=(pos:complement(8159..8161));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=J4731_24370;product=tRNA-Asp
JAGETS010000100.1	tRNAscan-SE	exon	8119	8195	.	-	.	ID=exon-J4731_24370-1;Parent=rna-J4731_24370;anticodon=(pos:complement(8159..8161));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=J4731_24370;product=tRNA-Asp
JAGETS010000100.1	Genbank	gene	8252	8365	.	-	.	ID=gene-J4731_24375;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=J4731_24375
JAGETS010000100.1	cmsearch	rRNA	8252	8365	.	-	.	ID=rna-J4731_24375;Parent=gene-J4731_24375;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=J4731_24375;product=5S ribosomal RNA
JAGETS010000100.1	cmsearch	exon	8252	8365	.	-	.	ID=exon-J4731_24375-1;Parent=rna-J4731_24375;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=J4731_24375;product=5S ribosomal RNA
JAGETS010000100.1	Genbank	gene	8503	8986	.	-	.	ID=gene-J4731_24380;Name=J4731_24380;end_range=8986,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=J4731_24380;partial=true
JAGETS010000100.1	cmsearch	rRNA	8503	8986	.	-	.	ID=rna-J4731_24380;Parent=gene-J4731_24380;Dbxref=RFAM:RF02541;end_range=8986,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=J4731_24380;partial=true;product=23S ribosomal RNA
JAGETS010000100.1	cmsearch	exon	8503	8986	.	-	.	ID=exon-J4731_24380-1;Parent=rna-J4731_24380;Dbxref=RFAM:RF02541;end_range=8986,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=J4731_24380;partial=true;product=23S ribosomal RNA
##sequence-region JAGETS010000101.1 1 14551
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=587
JAGETS010000101.1	Genbank	region	1	14551	.	+	.	ID=JAGETS010000101.1:1..14551;Dbxref=taxon:587;collected-by=NHLS;collection-date=2018;country=South Africa: Pretoria;gbkey=Src;isolation-source=stool;lat-lon=25.7479 S 28.2293 E;mol_type=genomic DNA;nat-host=porcine;strain=SG003
JAGETS010000101.1	Genbank	pseudogene	1	579	.	-	.	ID=gene-J4731_24385;Name=J4731_24385;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_24385;pseudo=true
JAGETS010000101.1	Protein Homology	CDS	1	579	.	-	0	ID=cds-J4731_24385;Parent=gene-J4731_24385;Note=Acylates the intermediate (KDO)2-lipid IVA to form (KDO)2-(palmitoleoyl)-lipid IVA in cells subjected to cold shock%3B frameshifted%3B internal stop%3B incomplete%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017827330.1;locus_tag=J4731_24385;product=kdo(2)-lipid IV(A) palmitoleoyltransferase;pseudo=true;transl_table=11
JAGETS010000101.1	Genbank	gene	1210	1297	.	-	.	ID=gene-J4731_24390;Name=J4731_24390;gbkey=Gene;gene_biotype=tRNA;locus_tag=J4731_24390
JAGETS010000101.1	tRNAscan-SE	tRNA	1210	1297	.	-	.	ID=rna-J4731_24390;Parent=gene-J4731_24390;anticodon=(pos:complement(1261..1263));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=J4731_24390;product=tRNA-Ser
JAGETS010000101.1	tRNAscan-SE	exon	1210	1297	.	-	.	ID=exon-J4731_24390-1;Parent=rna-J4731_24390;anticodon=(pos:complement(1261..1263));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=J4731_24390;product=tRNA-Ser
JAGETS010000101.1	Genbank	pseudogene	1506	4178	.	+	.	ID=gene-J4731_24395;Name=rcsD;gbkey=Gene;gene=rcsD;gene_biotype=pseudogene;locus_tag=J4731_24395;pseudo=true
JAGETS010000101.1	Protein Homology	CDS	1506	4178	.	+	0	ID=cds-J4731_24395;Parent=gene-J4731_24395;Note=frameshifted%3B internal stop;gbkey=CDS;gene=rcsD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006660315.1;locus_tag=J4731_24395;product=phosphotransferase RcsD;pseudo=true;transl_table=11
JAGETS010000101.1	Genbank	pseudogene	4180	4823	.	+	.	ID=gene-J4731_24400;Name=rcsB;gbkey=Gene;gene=rcsB;gene_biotype=pseudogene;locus_tag=J4731_24400;pseudo=true
JAGETS010000101.1	Protein Homology	CDS	4180	4823	.	+	0	ID=cds-J4731_24400;Parent=gene-J4731_24400;Note=frameshifted;gbkey=CDS;gene=rcsB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004259923.1;locus_tag=J4731_24400;product=transcriptional regulator RcsB;pseudo=true;transl_table=11
JAGETS010000101.1	Genbank	pseudogene	4902	5398	.	-	.	ID=gene-J4731_24405;Name=J4731_24405;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_24405;pseudo=true
JAGETS010000101.1	Protein Homology	CDS	4902	5398	.	-	0	ID=cds-J4731_24405;Parent=gene-J4731_24405;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015673124.1;locus_tag=J4731_24405;product=response regulator;pseudo=true;transl_table=11
JAGETS010000101.1	Genbank	gene	5395	5724	.	-	.	ID=gene-J4731_24410;Name=J4731_24410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_24410
JAGETS010000101.1	Protein Homology	CDS	5395	5724	.	-	0	ID=cds-MBO1929970.1;Parent=gene-J4731_24410;Dbxref=NCBI_GP:MBO1929970.1;Name=MBO1929970.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021007.1;locus_tag=J4731_24410;product=hypothetical protein;protein_id=MBO1929970.1;transl_table=11
JAGETS010000101.1	Genbank	gene	5756	5986	.	-	.	ID=gene-J4731_24415;Name=J4731_24415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_24415
JAGETS010000101.1	Protein Homology	CDS	5756	5986	.	-	0	ID=cds-MBO1929971.1;Parent=gene-J4731_24415;Dbxref=NCBI_GP:MBO1929971.1;Name=MBO1929971.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014567.1;locus_tag=J4731_24415;product=hypothetical protein;protein_id=MBO1929971.1;transl_table=11
JAGETS010000101.1	Genbank	gene	6009	6260	.	-	.	ID=gene-J4731_24420;Name=J4731_24420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_24420
JAGETS010000101.1	Protein Homology	CDS	6009	6260	.	-	0	ID=cds-MBO1929972.1;Parent=gene-J4731_24420;Dbxref=NCBI_GP:MBO1929972.1;Name=MBO1929972.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012722.1;locus_tag=J4731_24420;product=hypothetical protein;protein_id=MBO1929972.1;transl_table=11
JAGETS010000101.1	Genbank	gene	6414	6695	.	-	.	ID=gene-J4731_24425;Name=J4731_24425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_24425
JAGETS010000101.1	GeneMarkS-2+	CDS	6414	6695	.	-	0	ID=cds-MBO1929973.1;Parent=gene-J4731_24425;Dbxref=NCBI_GP:MBO1929973.1;Name=MBO1929973.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_24425;product=hypothetical protein;protein_id=MBO1929973.1;transl_table=11
JAGETS010000101.1	Genbank	gene	7034	7342	.	-	.	ID=gene-J4731_24430;Name=J4731_24430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_24430
JAGETS010000101.1	GeneMarkS-2+	CDS	7034	7342	.	-	0	ID=cds-MBO1929974.1;Parent=gene-J4731_24430;Dbxref=NCBI_GP:MBO1929974.1;Name=MBO1929974.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_24430;product=hypothetical protein;protein_id=MBO1929974.1;transl_table=11
JAGETS010000101.1	Genbank	gene	7321	7647	.	-	.	ID=gene-J4731_24435;Name=J4731_24435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_24435
JAGETS010000101.1	GeneMarkS-2+	CDS	7321	7647	.	-	0	ID=cds-MBO1929975.1;Parent=gene-J4731_24435;Dbxref=NCBI_GP:MBO1929975.1;Name=MBO1929975.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_24435;product=hypothetical protein;protein_id=MBO1929975.1;transl_table=11
JAGETS010000101.1	Genbank	pseudogene	7873	10482	.	-	.	ID=gene-J4731_24440;Name=gyrA;gbkey=Gene;gene=gyrA;gene_biotype=pseudogene;locus_tag=J4731_24440;pseudo=true
JAGETS010000101.1	Protein Homology	CDS	7873	10482	.	-	0	ID=cds-J4731_24440;Parent=gene-J4731_24440;Note=frameshifted;gbkey=CDS;gene=gyrA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004864890.1;locus_tag=J4731_24440;product=DNA topoisomerase (ATP-hydrolyzing) subunit A;pseudo=true;transl_table=11
JAGETS010000101.1	Genbank	pseudogene	10790	11507	.	+	.	ID=gene-J4731_24445;Name=ubiG;gbkey=Gene;gene=ubiG;gene_biotype=pseudogene;locus_tag=J4731_24445;pseudo=true
JAGETS010000101.1	Protein Homology	CDS	10790	11507	.	+	0	ID=cds-J4731_24445;Parent=gene-J4731_24445;Note=frameshifted;gbkey=CDS;gene=ubiG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015963684.1;locus_tag=J4731_24445;product=bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG;pseudo=true;transl_table=11
JAGETS010000101.1	Genbank	pseudogene	11861	14118	.	+	.	ID=gene-J4731_24450;Name=nrdA;gbkey=Gene;gene=nrdA;gene_biotype=pseudogene;locus_tag=J4731_24450;pseudo=true
JAGETS010000101.1	Protein Homology	CDS	11861	14118	.	+	0	ID=cds-J4731_24450;Parent=gene-J4731_24450;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;gene=nrdA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129392.1;locus_tag=J4731_24450;product=ribonucleoside-diphosphate reductase subunit alpha;pseudo=true;transl_table=11
JAGETS010000101.1	Genbank	pseudogene	14128	14551	.	+	.	ID=gene-J4731_24455;Name=J4731_24455;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_24455;pseudo=true
JAGETS010000101.1	Protein Homology	CDS	14128	14551	.	+	0	ID=cds-J4731_24455;Parent=gene-J4731_24455;Note=frameshifted%3B incomplete%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008910744.1;locus_tag=J4731_24455;product=ribonucleotide-diphosphate reductase subunit beta;pseudo=true;transl_table=11
##sequence-region JAGETS010000102.1 1 10624
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=587
JAGETS010000102.1	Genbank	region	1	10624	.	+	.	ID=JAGETS010000102.1:1..10624;Dbxref=taxon:587;collected-by=NHLS;collection-date=2018;country=South Africa: Pretoria;gbkey=Src;isolation-source=stool;lat-lon=25.7479 S 28.2293 E;mol_type=genomic DNA;nat-host=porcine;strain=SG003
JAGETS010000102.1	Genbank	pseudogene	1	577	.	+	.	ID=gene-J4731_24460;Name=J4731_24460;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_24460;pseudo=true
JAGETS010000102.1	Protein Homology	CDS	1	577	.	+	1	ID=cds-J4731_24460;Parent=gene-J4731_24460;Note=frameshifted%3B internal stop%3B incomplete%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459426.1;locus_tag=J4731_24460;product=aminotransferase class V-fold PLP-dependent enzyme;pseudo=true;transl_table=11
JAGETS010000102.1	Genbank	pseudogene	564	1411	.	+	.	ID=gene-J4731_24465;Name=J4731_24465;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_24465;pseudo=true
JAGETS010000102.1	Protein Homology	CDS	564	1411	.	+	0	ID=cds-J4731_24465;Parent=gene-J4731_24465;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229535.1;locus_tag=J4731_24465;product=phosphonoacetaldehyde hydrolase;pseudo=true;transl_table=11
JAGETS010000102.1	Genbank	pseudogene	2416	3374	.	-	.	ID=gene-J4731_24470;Name=argF;gbkey=Gene;gene=argF;gene_biotype=pseudogene;locus_tag=J4731_24470;pseudo=true
JAGETS010000102.1	Protein Homology	CDS	2416	3374	.	-	0	ID=cds-J4731_24470;Parent=gene-J4731_24470;Note=frameshifted;gbkey=CDS;gene=argF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008912316.1;locus_tag=J4731_24470;product=ornithine carbamoyltransferase;pseudo=true;transl_table=11
JAGETS010000102.1	Genbank	pseudogene	3591	4003	.	+	.	ID=gene-J4731_24475;Name=rraB;gbkey=Gene;gene=rraB;gene_biotype=pseudogene;locus_tag=J4731_24475;pseudo=true
JAGETS010000102.1	Protein Homology	CDS	3591	4003	.	+	0	ID=cds-J4731_24475;Parent=gene-J4731_24475;Note=frameshifted;gbkey=CDS;gene=rraB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006657925.1;locus_tag=J4731_24475;product=ribonuclease E inhibitor RraB;pseudo=true;transl_table=11
JAGETS010000102.1	Genbank	pseudogene	4069	4561	.	-	.	ID=gene-J4731_24480;Name=J4731_24480;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_24480;pseudo=true
JAGETS010000102.1	Protein Homology	CDS	4069	4561	.	-	0	ID=cds-J4731_24480;Parent=gene-J4731_24480;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010845161.1;locus_tag=J4731_24480;product=GNAT family N-acetyltransferase;pseudo=true;transl_table=11
JAGETS010000102.1	Genbank	pseudogene	4718	7557	.	-	.	ID=gene-J4731_24485;Name=J4731_24485;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_24485;pseudo=true
JAGETS010000102.1	Protein Homology	CDS	4718	7557	.	-	0	ID=cds-J4731_24485;Parent=gene-J4731_24485;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013577148.1;locus_tag=J4731_24485;product=valine--tRNA ligase;pseudo=true;transl_table=11
JAGETS010000102.1	Genbank	pseudogene	7595	7948	.	-	.	ID=gene-J4731_24490;Name=J4731_24490;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_24490;pseudo=true
JAGETS010000102.1	Protein Homology	CDS	7595	7948	.	-	0	ID=cds-J4731_24490;Parent=gene-J4731_24490;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013316103.1;locus_tag=J4731_24490;product=DNA polymerase III subunit chi;pseudo=true;transl_table=11
JAGETS010000102.1	Genbank	pseudogene	8505	10026	.	-	.	ID=gene-J4731_24495;Name=pepA;gbkey=Gene;gene=pepA;gene_biotype=pseudogene;locus_tag=J4731_24495;pseudo=true
JAGETS010000102.1	Protein Homology	CDS	8505	10026	.	-	0	ID=cds-J4731_24495;Parent=gene-J4731_24495;Note=frameshifted;gbkey=CDS;gene=pepA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007767120.1;locus_tag=J4731_24495;product=leucyl aminopeptidase;pseudo=true;transl_table=11
JAGETS010000102.1	Genbank	pseudogene	10350	10624	.	+	.	ID=gene-J4731_24500;Name=J4731_24500;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_24500;pseudo=true
JAGETS010000102.1	Protein Homology	CDS	10350	10624	.	+	0	ID=cds-J4731_24500;Parent=gene-J4731_24500;Note=frameshifted%3B incomplete%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004389287.1;locus_tag=J4731_24500;product=LptF/LptG family permease;pseudo=true;transl_table=11
##sequence-region JAGETS010000103.1 1 7219
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=587
JAGETS010000103.1	Genbank	region	1	7219	.	+	.	ID=JAGETS010000103.1:1..7219;Dbxref=taxon:587;collected-by=NHLS;collection-date=2018;country=South Africa: Pretoria;gbkey=Src;isolation-source=stool;lat-lon=25.7479 S 28.2293 E;mol_type=genomic DNA;nat-host=porcine;strain=SG003
JAGETS010000103.1	Genbank	pseudogene	601	2017	.	+	.	ID=gene-J4731_24505;Name=J4731_24505;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_24505;pseudo=true
JAGETS010000103.1	Protein Homology	CDS	601	2017	.	+	0	ID=cds-J4731_24505;Parent=gene-J4731_24505;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000003905.1;locus_tag=J4731_24505;product=MFS transporter;pseudo=true;transl_table=11
JAGETS010000103.1	Genbank	pseudogene	1942	2904	.	-	.	ID=gene-J4731_24510;Name=rbsR;gbkey=Gene;gene=rbsR;gene_biotype=pseudogene;locus_tag=J4731_24510;pseudo=true
JAGETS010000103.1	Protein Homology	CDS	1942	2904	.	-	0	ID=cds-J4731_24510;Parent=gene-J4731_24510;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;gene=rbsR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004245127.1;locus_tag=J4731_24510;product=ribose operon transcriptional repressor RbsR;pseudo=true;transl_table=11
JAGETS010000103.1	Genbank	pseudogene	2917	3830	.	-	.	ID=gene-J4731_24515;Name=rbsK;gbkey=Gene;gene=rbsK;gene_biotype=pseudogene;locus_tag=J4731_24515;pseudo=true
JAGETS010000103.1	Protein Homology	CDS	2917	3830	.	-	0	ID=cds-J4731_24515;Parent=gene-J4731_24515;Note=frameshifted;gbkey=CDS;gene=rbsK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004923951.1;locus_tag=J4731_24515;product=ribokinase;pseudo=true;transl_table=11
JAGETS010000103.1	Genbank	pseudogene	3910	4796	.	-	.	ID=gene-J4731_24520;Name=rbsB;gbkey=Gene;gene=rbsB;gene_biotype=pseudogene;locus_tag=J4731_24520;pseudo=true
JAGETS010000103.1	Protein Homology	CDS	3910	4796	.	-	0	ID=cds-J4731_24520;Parent=gene-J4731_24520;Note=frameshifted;gbkey=CDS;gene=rbsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312720.1;locus_tag=J4731_24520;product=ribose ABC transporter substrate-binding protein RbsB;pseudo=true;transl_table=11
JAGETS010000103.1	Genbank	pseudogene	4815	5773	.	-	.	ID=gene-J4731_24525;Name=rbsC;gbkey=Gene;gene=rbsC;gene_biotype=pseudogene;locus_tag=J4731_24525;pseudo=true
JAGETS010000103.1	Protein Homology	CDS	4815	5773	.	-	0	ID=cds-J4731_24525;Parent=gene-J4731_24525;Note=frameshifted;gbkey=CDS;gene=rbsC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002882531.1;locus_tag=J4731_24525;product=ribose ABC transporter permease;pseudo=true;transl_table=11
JAGETS010000103.1	Genbank	pseudogene	5770	7219	.	-	.	ID=gene-J4731_24530;Name=rbsA;gbkey=Gene;gene=rbsA;gene_biotype=pseudogene;locus_tag=J4731_24530;pseudo=true
JAGETS010000103.1	Protein Homology	CDS	5770	7219	.	-	1	ID=cds-J4731_24530;Parent=gene-J4731_24530;Note=frameshifted%3B incomplete%3B missing N-terminus;gbkey=CDS;gene=rbsA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009088179.1;locus_tag=J4731_24530;product=ribose ABC transporter ATP-binding protein RbsA;pseudo=true;transl_table=11
##sequence-region JAGETS010000104.1 1 7855
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=587
JAGETS010000104.1	Genbank	region	1	7855	.	+	.	ID=JAGETS010000104.1:1..7855;Dbxref=taxon:587;collected-by=NHLS;collection-date=2018;country=South Africa: Pretoria;gbkey=Src;isolation-source=stool;lat-lon=25.7479 S 28.2293 E;mol_type=genomic DNA;nat-host=porcine;strain=SG003
JAGETS010000104.1	Genbank	pseudogene	1	639	.	-	.	ID=gene-J4731_24535;Name=J4731_24535;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_24535;pseudo=true
JAGETS010000104.1	Protein Homology	CDS	1	639	.	-	0	ID=cds-J4731_24535;Parent=gene-J4731_24535;Note=frameshifted%3B internal stop%3B incomplete%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004238044.1;locus_tag=J4731_24535;product=LysR family transcriptional regulator;pseudo=true;transl_table=11
JAGETS010000104.1	Genbank	pseudogene	838	1906	.	+	.	ID=gene-J4731_24540;Name=J4731_24540;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_24540;pseudo=true
JAGETS010000104.1	Protein Homology	CDS	838	1906	.	+	0	ID=cds-J4731_24540;Parent=gene-J4731_24540;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019079933.1;locus_tag=J4731_24540;product=YeiH family putative sulfate export transporter;pseudo=true;transl_table=11
JAGETS010000104.1	Genbank	pseudogene	2010	2835	.	+	.	ID=gene-J4731_24545;Name=nfo;gbkey=Gene;gene=nfo;gene_biotype=pseudogene;locus_tag=J4731_24545;pseudo=true
JAGETS010000104.1	Protein Homology	CDS	2010	2835	.	+	0	ID=cds-J4731_24545;Parent=gene-J4731_24545;Note=frameshifted%3B internal stop;gbkey=CDS;gene=nfo;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006660786.1;locus_tag=J4731_24545;product=deoxyribonuclease IV;pseudo=true;transl_table=11
JAGETS010000104.1	Genbank	pseudogene	2908	3826	.	-	.	ID=gene-J4731_24550;Name=fruK;gbkey=Gene;gene=fruK;gene_biotype=pseudogene;locus_tag=J4731_24550;pseudo=true
JAGETS010000104.1	Protein Homology	CDS	2908	3826	.	-	0	ID=cds-J4731_24550;Parent=gene-J4731_24550;Note=frameshifted;gbkey=CDS;gene=fruK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006660785.1;locus_tag=J4731_24550;product=1-phosphofructokinase;pseudo=true;transl_table=11
JAGETS010000104.1	Genbank	pseudogene	3990	4476	.	+	.	ID=gene-J4731_24555;Name=J4731_24555;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_24555;pseudo=true
JAGETS010000104.1	Protein Homology	CDS	3990	4476	.	+	0	ID=cds-J4731_24555;Parent=gene-J4731_24555;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004253127.1;locus_tag=J4731_24555;product=NUDIX domain-containing protein;pseudo=true;transl_table=11
JAGETS010000104.1	Genbank	pseudogene	4780	5704	.	+	.	ID=gene-J4731_24560;Name=J4731_24560;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_24560;pseudo=true
JAGETS010000104.1	Protein Homology	CDS	4780	5704	.	+	0	ID=cds-J4731_24560;Parent=gene-J4731_24560;Note=tryptophan transporter of high affinity%3B frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004720911.1;locus_tag=J4731_24560;product=tryptophan permease;pseudo=true;transl_table=11
JAGETS010000104.1	Genbank	pseudogene	5914	6469	.	+	.	ID=gene-J4731_24565;Name=yeiP;gbkey=Gene;gene=yeiP;gene_biotype=pseudogene;locus_tag=J4731_24565;pseudo=true
JAGETS010000104.1	Protein Homology	CDS	5914	6469	.	+	0	ID=cds-J4731_24565;Parent=gene-J4731_24565;Note=frameshifted;gbkey=CDS;gene=yeiP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007750416.1;locus_tag=J4731_24565;product=elongation factor P-like protein YeiP;pseudo=true;transl_table=11
JAGETS010000104.1	Genbank	pseudogene	7282	7842	.	+	.	ID=gene-J4731_24570;Name=J4731_24570;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_24570;pseudo=true
JAGETS010000104.1	Protein Homology	CDS	7282	7842	.	+	0	ID=cds-J4731_24570;Parent=gene-J4731_24570;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004920888.1;locus_tag=J4731_24570;product=hypothetical protein;pseudo=true;transl_table=11
##sequence-region JAGETS010000105.1 1 3433
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=587
JAGETS010000105.1	Genbank	region	1	3433	.	+	.	ID=JAGETS010000105.1:1..3433;Dbxref=taxon:587;collected-by=NHLS;collection-date=2018;country=South Africa: Pretoria;gbkey=Src;isolation-source=stool;lat-lon=25.7479 S 28.2293 E;mol_type=genomic DNA;nat-host=porcine;strain=SG003
JAGETS010000105.1	Genbank	pseudogene	1	2128	.	+	.	ID=gene-J4731_24575;Name=J4731_24575;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_24575;pseudo=true
JAGETS010000105.1	Protein Homology	CDS	1	2128	.	+	1	ID=cds-J4731_24575;Parent=gene-J4731_24575;Note=frameshifted%3B internal stop%3B incomplete%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006658245.1;locus_tag=J4731_24575;product=efflux RND transporter permease subunit;pseudo=true;transl_table=11
JAGETS010000105.1	Genbank	gene	2311	2490	.	-	.	ID=gene-J4731_24580;Name=J4731_24580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_24580
JAGETS010000105.1	GeneMarkS-2+	CDS	2311	2490	.	-	0	ID=cds-MBO1929976.1;Parent=gene-J4731_24580;Dbxref=NCBI_GP:MBO1929976.1;Name=MBO1929976.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_24580;product=hypothetical protein;protein_id=MBO1929976.1;transl_table=11
JAGETS010000105.1	Genbank	gene	3082	3433	.	-	.	ID=gene-J4731_24585;Name=J4731_24585;end_range=3433,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_24585;partial=true
JAGETS010000105.1	GeneMarkS-2+	CDS	3082	3433	.	-	1	ID=cds-MBO1929977.1;Parent=gene-J4731_24585;Dbxref=NCBI_GP:MBO1929977.1;Name=MBO1929977.1;end_range=3433,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_24585;partial=true;product=hypothetical protein;protein_id=MBO1929977.1;transl_table=11
##sequence-region JAGETS010000106.1 1 2100
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=587
JAGETS010000106.1	Genbank	region	1	2100	.	+	.	ID=JAGETS010000106.1:1..2100;Dbxref=taxon:587;collected-by=NHLS;collection-date=2018;country=South Africa: Pretoria;gbkey=Src;isolation-source=stool;lat-lon=25.7479 S 28.2293 E;mol_type=genomic DNA;nat-host=porcine;strain=SG003
JAGETS010000106.1	Genbank	pseudogene	412	2100	.	+	.	ID=gene-J4731_24590;Name=J4731_24590;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_24590;pseudo=true
JAGETS010000106.1	Protein Homology	CDS	412	2100	.	+	0	ID=cds-J4731_24590;Parent=gene-J4731_24590;Note=frameshifted%3B incomplete%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006661744.1;locus_tag=J4731_24590;product=4-aminobutyrate aminotransferase;pseudo=true;transl_table=11
##sequence-region JAGETS010000107.1 1 1009
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=587
JAGETS010000107.1	Genbank	region	1	1009	.	+	.	ID=JAGETS010000107.1:1..1009;Dbxref=taxon:587;collected-by=NHLS;collection-date=2018;country=South Africa: Pretoria;gbkey=Src;isolation-source=stool;lat-lon=25.7479 S 28.2293 E;mol_type=genomic DNA;nat-host=porcine;strain=SG003
JAGETS010000107.1	Genbank	pseudogene	50	1009	.	+	.	ID=gene-J4731_24595;Name=J4731_24595;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_24595;pseudo=true
JAGETS010000107.1	Protein Homology	CDS	50	1009	.	+	0	ID=cds-J4731_24595;Parent=gene-J4731_24595;Note=frameshifted%3B internal stop%3B incomplete%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012477168.1;locus_tag=J4731_24595;product=IS3 family transposase;pseudo=true;transl_table=11
##sequence-region JAGETS010000108.1 1 1100
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=587
JAGETS010000108.1	Genbank	region	1	1100	.	+	.	ID=JAGETS010000108.1:1..1100;Dbxref=taxon:587;collected-by=NHLS;collection-date=2018;country=South Africa: Pretoria;gbkey=Src;isolation-source=stool;lat-lon=25.7479 S 28.2293 E;mol_type=genomic DNA;nat-host=porcine;strain=SG003
JAGETS010000108.1	Genbank	gene	1	188	.	+	.	ID=gene-J4731_24600;Name=J4731_24600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_24600;partial=true;start_range=.,1
JAGETS010000108.1	GeneMarkS-2+	CDS	1	188	.	+	2	ID=cds-MBO1929978.1;Parent=gene-J4731_24600;Dbxref=NCBI_GP:MBO1929978.1;Name=MBO1929978.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_24600;partial=true;product=hypothetical protein;protein_id=MBO1929978.1;start_range=.,1;transl_table=11
JAGETS010000108.1	Genbank	pseudogene	714	977	.	+	.	ID=gene-J4731_24605;Name=J4731_24605;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_24605;pseudo=true
JAGETS010000108.1	Protein Homology	CDS	714	977	.	+	0	ID=cds-J4731_24605;Parent=gene-J4731_24605;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417123.1;locus_tag=J4731_24605;product=transcriptional regulator;pseudo=true;transl_table=11
##sequence-region JAGETS010000109.1 1 1421
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=587
JAGETS010000109.1	Genbank	region	1	1421	.	+	.	ID=JAGETS010000109.1:1..1421;Dbxref=taxon:587;collected-by=NHLS;collection-date=2018;country=South Africa: Pretoria;gbkey=Src;isolation-source=stool;lat-lon=25.7479 S 28.2293 E;mol_type=genomic DNA;nat-host=porcine;strain=SG003
JAGETS010000109.1	Genbank	pseudogene	42	271	.	+	.	ID=gene-J4731_24610;Name=acpP;gbkey=Gene;gene=acpP;gene_biotype=pseudogene;locus_tag=J4731_24610;pseudo=true
JAGETS010000109.1	Protein Homology	CDS	42	271	.	+	0	ID=cds-J4731_24610;Parent=gene-J4731_24610;Note=frameshifted%3B internal stop;gbkey=CDS;gene=acpP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005293837.1;locus_tag=J4731_24610;product=acyl carrier protein;pseudo=true;transl_table=11
JAGETS010000109.1	Genbank	pseudogene	349	1421	.	+	.	ID=gene-J4731_24615;Name=J4731_24615;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_24615;pseudo=true
JAGETS010000109.1	Protein Homology	CDS	349	1421	.	+	0	ID=cds-J4731_24615;Parent=gene-J4731_24615;Note=frameshifted%3B internal stop%3B incomplete%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309500.1;locus_tag=J4731_24615;product=beta-ketoacyl-ACP synthase II;pseudo=true;transl_table=11
##sequence-region JAGETS010000011.1 1 4112
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=587
JAGETS010000011.1	Genbank	region	1	4112	.	+	.	ID=JAGETS010000011.1:1..4112;Dbxref=taxon:587;collected-by=NHLS;collection-date=2018;country=South Africa: Pretoria;gbkey=Src;isolation-source=stool;lat-lon=25.7479 S 28.2293 E;mol_type=genomic DNA;nat-host=porcine;strain=SG003
JAGETS010000011.1	Genbank	gene	1	346	.	+	.	ID=gene-J4731_06635;Name=J4731_06635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_06635;partial=true;start_range=.,1
JAGETS010000011.1	Protein Homology	CDS	1	346	.	+	1	ID=cds-MBO1928970.1;Parent=gene-J4731_06635;Dbxref=NCBI_GP:MBO1928970.1;Name=MBO1928970.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013317171.1;locus_tag=J4731_06635;partial=true;product=efflux RND transporter permease subunit;protein_id=MBO1928970.1;start_range=.,1;transl_table=11
JAGETS010000011.1	Genbank	gene	346	642	.	+	.	ID=gene-J4731_06640;Name=J4731_06640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_06640
JAGETS010000011.1	GeneMarkS-2+	CDS	346	642	.	+	0	ID=cds-MBO1928971.1;Parent=gene-J4731_06640;Dbxref=NCBI_GP:MBO1928971.1;Name=MBO1928971.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_06640;product=hypothetical protein;protein_id=MBO1928971.1;transl_table=11
JAGETS010000011.1	Genbank	gene	864	1025	.	+	.	ID=gene-J4731_06645;Name=J4731_06645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_06645
JAGETS010000011.1	GeneMarkS-2+	CDS	864	1025	.	+	0	ID=cds-MBO1928972.1;Parent=gene-J4731_06645;Dbxref=NCBI_GP:MBO1928972.1;Name=MBO1928972.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_06645;product=hypothetical protein;protein_id=MBO1928972.1;transl_table=11
JAGETS010000011.1	Genbank	gene	1063	1218	.	+	.	ID=gene-J4731_06650;Name=J4731_06650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_06650
JAGETS010000011.1	GeneMarkS-2+	CDS	1063	1218	.	+	0	ID=cds-MBO1928973.1;Parent=gene-J4731_06650;Dbxref=NCBI_GP:MBO1928973.1;Name=MBO1928973.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_06650;product=hypothetical protein;protein_id=MBO1928973.1;transl_table=11
JAGETS010000011.1	Genbank	gene	1459	1659	.	+	.	ID=gene-J4731_06655;Name=J4731_06655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_06655
JAGETS010000011.1	GeneMarkS-2+	CDS	1459	1659	.	+	0	ID=cds-MBO1928974.1;Parent=gene-J4731_06655;Dbxref=NCBI_GP:MBO1928974.1;Name=MBO1928974.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_06655;product=hypothetical protein;protein_id=MBO1928974.1;transl_table=11
JAGETS010000011.1	Genbank	gene	1781	1984	.	+	.	ID=gene-J4731_06660;Name=J4731_06660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_06660
JAGETS010000011.1	GeneMarkS-2+	CDS	1781	1984	.	+	0	ID=cds-MBO1928975.1;Parent=gene-J4731_06660;Dbxref=NCBI_GP:MBO1928975.1;Name=MBO1928975.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_06660;product=hypothetical protein;protein_id=MBO1928975.1;transl_table=11
JAGETS010000011.1	Genbank	gene	2000	2146	.	+	.	ID=gene-J4731_06665;Name=J4731_06665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_06665
JAGETS010000011.1	GeneMarkS-2+	CDS	2000	2146	.	+	0	ID=cds-MBO1928976.1;Parent=gene-J4731_06665;Dbxref=NCBI_GP:MBO1928976.1;Name=MBO1928976.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_06665;product=hypothetical protein;protein_id=MBO1928976.1;transl_table=11
JAGETS010000011.1	Genbank	gene	2229	2720	.	+	.	ID=gene-J4731_06670;Name=J4731_06670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_06670
JAGETS010000011.1	GeneMarkS-2+	CDS	2229	2720	.	+	0	ID=cds-MBO1928977.1;Parent=gene-J4731_06670;Dbxref=NCBI_GP:MBO1928977.1;Name=MBO1928977.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_06670;product=hypothetical protein;protein_id=MBO1928977.1;transl_table=11
JAGETS010000011.1	Genbank	gene	2726	2941	.	+	.	ID=gene-J4731_06675;Name=J4731_06675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_06675
JAGETS010000011.1	GeneMarkS-2+	CDS	2726	2941	.	+	0	ID=cds-MBO1928978.1;Parent=gene-J4731_06675;Dbxref=NCBI_GP:MBO1928978.1;Name=MBO1928978.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_06675;product=hypothetical protein;protein_id=MBO1928978.1;transl_table=11
JAGETS010000011.1	Genbank	gene	3216	3356	.	+	.	ID=gene-J4731_06680;Name=J4731_06680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_06680
JAGETS010000011.1	GeneMarkS-2+	CDS	3216	3356	.	+	0	ID=cds-MBO1928979.1;Parent=gene-J4731_06680;Dbxref=NCBI_GP:MBO1928979.1;Name=MBO1928979.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_06680;product=hypothetical protein;protein_id=MBO1928979.1;transl_table=11
##sequence-region JAGETS010000110.1 1 2321
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=587
JAGETS010000110.1	Genbank	region	1	2321	.	+	.	ID=JAGETS010000110.1:1..2321;Dbxref=taxon:587;collected-by=NHLS;collection-date=2018;country=South Africa: Pretoria;gbkey=Src;isolation-source=stool;lat-lon=25.7479 S 28.2293 E;mol_type=genomic DNA;nat-host=porcine;strain=SG003
JAGETS010000110.1	Genbank	pseudogene	1	281	.	-	.	ID=gene-J4731_24620;Name=J4731_24620;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_24620;pseudo=true
JAGETS010000110.1	Protein Homology	CDS	1	281	.	-	0	ID=cds-J4731_24620;Parent=gene-J4731_24620;Note=frameshifted%3B internal stop%3B incomplete%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417403.1;locus_tag=J4731_24620;product=nucleoside/nucleotide kinase family protein;pseudo=true;transl_table=11
JAGETS010000110.1	Genbank	pseudogene	278	786	.	-	.	ID=gene-J4731_24625;Name=J4731_24625;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_24625;pseudo=true
JAGETS010000110.1	Protein Homology	CDS	278	786	.	-	0	ID=cds-J4731_24625;Parent=gene-J4731_24625;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417404.1;locus_tag=J4731_24625;product=transcriptional regulator;pseudo=true;transl_table=11
JAGETS010000110.1	Genbank	pseudogene	808	1708	.	-	.	ID=gene-J4731_24630;Name=yggF;gbkey=Gene;gene=yggF;gene_biotype=pseudogene;locus_tag=J4731_24630;pseudo=true
JAGETS010000110.1	Protein Homology	CDS	808	1708	.	-	0	ID=cds-J4731_24630;Parent=gene-J4731_24630;Note=frameshifted;gbkey=CDS;gene=yggF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417405.1;locus_tag=J4731_24630;product=class II fructose-bisphosphatase;pseudo=true;transl_table=11
JAGETS010000110.1	Genbank	pseudogene	1771	2321	.	-	.	ID=gene-J4731_24635;Name=J4731_24635;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_24635;pseudo=true
JAGETS010000110.1	Protein Homology	CDS	1771	2321	.	-	1	ID=cds-J4731_24635;Parent=gene-J4731_24635;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311834.1;locus_tag=J4731_24635;product=zinc-binding dehydrogenase;pseudo=true;transl_table=11
##sequence-region JAGETS010000111.1 1 2457
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=587
JAGETS010000111.1	Genbank	region	1	2457	.	+	.	ID=JAGETS010000111.1:1..2457;Dbxref=taxon:587;collected-by=NHLS;collection-date=2018;country=South Africa: Pretoria;gbkey=Src;isolation-source=stool;lat-lon=25.7479 S 28.2293 E;mol_type=genomic DNA;nat-host=porcine;strain=SG003
JAGETS010000111.1	Genbank	pseudogene	47	913	.	-	.	ID=gene-J4731_24640;Name=cutC;gbkey=Gene;gene=cutC;gene_biotype=pseudogene;locus_tag=J4731_24640;pseudo=true
JAGETS010000111.1	Protein Homology	CDS	47	913	.	-	0	ID=cds-J4731_24640;Parent=gene-J4731_24640;Note=frameshifted%3B internal stop;gbkey=CDS;gene=cutC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_025309.2;locus_tag=J4731_24640;product=copper homeostasis protein CutC;pseudo=true;transl_table=11
JAGETS010000111.1	Genbank	pseudogene	927	1493	.	-	.	ID=gene-J4731_24645;Name=J4731_24645;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_24645;pseudo=true
JAGETS010000111.1	Protein Homology	CDS	927	1493	.	-	0	ID=cds-J4731_24645;Parent=gene-J4731_24645;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310612.2;locus_tag=J4731_24645;product=VOC family protein;pseudo=true;transl_table=11
JAGETS010000111.1	Genbank	pseudogene	1711	2457	.	+	.	ID=gene-J4731_24650;Name=argS;gbkey=Gene;gene=argS;gene_biotype=pseudogene;locus_tag=J4731_24650;pseudo=true
JAGETS010000111.1	Protein Homology	CDS	1711	2457	.	+	0	ID=cds-J4731_24650;Parent=gene-J4731_24650;Note=frameshifted%3B incomplete%3B missing C-terminus;gbkey=CDS;gene=argS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001025321.1;locus_tag=J4731_24650;product=arginine--tRNA ligase;pseudo=true;transl_table=11
##sequence-region JAGETS010000112.1 1 1849
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=587
JAGETS010000112.1	Genbank	region	1	1849	.	+	.	ID=JAGETS010000112.1:1..1849;Dbxref=taxon:587;collected-by=NHLS;collection-date=2018;country=South Africa: Pretoria;gbkey=Src;isolation-source=stool;lat-lon=25.7479 S 28.2293 E;mol_type=genomic DNA;nat-host=porcine;strain=SG003
JAGETS010000112.1	Genbank	pseudogene	1	843	.	+	.	ID=gene-J4731_24655;Name=fucP;gbkey=Gene;gene=fucP;gene_biotype=pseudogene;locus_tag=J4731_24655;pseudo=true
JAGETS010000112.1	Protein Homology	CDS	1	843	.	+	1	ID=cds-J4731_24655;Parent=gene-J4731_24655;Note=frameshifted%3B internal stop%3B incomplete%3B missing N-terminus;gbkey=CDS;gene=fucP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417281.1;locus_tag=J4731_24655;product=L-fucose:H+ symporter permease;pseudo=true;transl_table=11
JAGETS010000112.1	Genbank	pseudogene	932	1849	.	+	.	ID=gene-J4731_24660;Name=fucI;gbkey=Gene;gene=fucI;gene_biotype=pseudogene;locus_tag=J4731_24660;pseudo=true
JAGETS010000112.1	Protein Homology	CDS	932	1849	.	+	0	ID=cds-J4731_24660;Parent=gene-J4731_24660;Note=catalyzes the conversion of the aldose L-fucose into the corresponding ketose L-fuculose%3B frameshifted%3B internal stop%3B incomplete%3B missing C-terminus;gbkey=CDS;gene=fucI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311689.1;locus_tag=J4731_24660;product=L-fucose isomerase;pseudo=true;transl_table=11
##sequence-region JAGETS010000113.1 1 2090
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=587
JAGETS010000113.1	Genbank	region	1	2090	.	+	.	ID=JAGETS010000113.1:1..2090;Dbxref=taxon:587;collected-by=NHLS;collection-date=2018;country=South Africa: Pretoria;gbkey=Src;isolation-source=stool;lat-lon=25.7479 S 28.2293 E;mol_type=genomic DNA;nat-host=porcine;strain=SG003
JAGETS010000113.1	Genbank	pseudogene	1	1745	.	-	.	ID=gene-J4731_24665;Name=J4731_24665;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_24665;pseudo=true
JAGETS010000113.1	Protein Homology	CDS	1	1745	.	-	0	ID=cds-J4731_24665;Parent=gene-J4731_24665;Note=frameshifted%3B internal stop%3B incomplete%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000548955.1;locus_tag=J4731_24665;product=conjugal transfer protein;pseudo=true;transl_table=11
##sequence-region JAGETS010000114.1 1 1063
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=587
JAGETS010000114.1	Genbank	region	1	1063	.	+	.	ID=JAGETS010000114.1:1..1063;Dbxref=taxon:587;collected-by=NHLS;collection-date=2018;country=South Africa: Pretoria;gbkey=Src;isolation-source=stool;lat-lon=25.7479 S 28.2293 E;mol_type=genomic DNA;nat-host=porcine;strain=SG003
JAGETS010000114.1	Genbank	pseudogene	1	857	.	-	.	ID=gene-J4731_24670;Name=J4731_24670;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_24670;pseudo=true
JAGETS010000114.1	Protein Homology	CDS	1	857	.	-	0	ID=cds-J4731_24670;Parent=gene-J4731_24670;Note=frameshifted%3B internal stop%3B incomplete%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001540083.1;locus_tag=J4731_24670;product=lipopolysaccharide 1%2C3-galactosyltransferase;pseudo=true;transl_table=11
JAGETS010000114.1	Genbank	pseudogene	876	1063	.	-	.	ID=gene-J4731_24675;Name=J4731_24675;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_24675;pseudo=true
JAGETS010000114.1	Protein Homology	CDS	876	1063	.	-	2	ID=cds-J4731_24675;Parent=gene-J4731_24675;Note=catalyzes the phosphorylation of heptose I in the lipopolysaccharide core%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016538889.1;locus_tag=J4731_24675;product=lipopolysaccharide core heptose(I) kinase RfaP;pseudo=true;transl_table=11
##sequence-region JAGETS010000115.1 1 1182
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=587
JAGETS010000115.1	Genbank	region	1	1182	.	+	.	ID=JAGETS010000115.1:1..1182;Dbxref=taxon:587;collected-by=NHLS;collection-date=2018;country=South Africa: Pretoria;gbkey=Src;isolation-source=stool;lat-lon=25.7479 S 28.2293 E;mol_type=genomic DNA;nat-host=porcine;strain=SG003
JAGETS010000115.1	Genbank	pseudogene	1	1136	.	-	.	ID=gene-J4731_24680;Name=J4731_24680;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_24680;pseudo=true
JAGETS010000115.1	Protein Homology	CDS	1	1136	.	-	0	ID=cds-J4731_24680;Parent=gene-J4731_24680;Note=frameshifted%3B internal stop%3B incomplete%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612015.1;locus_tag=J4731_24680;product=IS3 family transposase;pseudo=true;transl_table=11
##sequence-region JAGETS010000116.1 1 1066
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=587
JAGETS010000116.1	Genbank	region	1	1066	.	+	.	ID=JAGETS010000116.1:1..1066;Dbxref=taxon:587;collected-by=NHLS;collection-date=2018;country=South Africa: Pretoria;gbkey=Src;isolation-source=stool;lat-lon=25.7479 S 28.2293 E;mol_type=genomic DNA;nat-host=porcine;strain=SG003
JAGETS010000116.1	Genbank	pseudogene	1	1066	.	-	.	ID=gene-J4731_24685;Name=tadA;gbkey=Gene;gene=tadA;gene_biotype=pseudogene;locus_tag=J4731_24685;pseudo=true
JAGETS010000116.1	Protein Homology	CDS	1	1066	.	-	1	ID=cds-J4731_24685;Parent=gene-J4731_24685;Note=frameshifted%3B incomplete%3B missing N-terminus and C-terminus;gbkey=CDS;gene=tadA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001407399.1;locus_tag=J4731_24685;product=Flp pilus assembly complex ATPase component TadA;pseudo=true;transl_table=11
##sequence-region JAGETS010000117.1 1 1459
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=587
JAGETS010000117.1	Genbank	region	1	1459	.	+	.	ID=JAGETS010000117.1:1..1459;Dbxref=taxon:587;collected-by=NHLS;collection-date=2018;country=South Africa: Pretoria;gbkey=Src;isolation-source=stool;lat-lon=25.7479 S 28.2293 E;mol_type=genomic DNA;nat-host=porcine;strain=SG003
##sequence-region JAGETS010000118.1 1 2017
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=587
JAGETS010000118.1	Genbank	region	1	2017	.	+	.	ID=JAGETS010000118.1:1..2017;Dbxref=taxon:587;collected-by=NHLS;collection-date=2018;country=South Africa: Pretoria;gbkey=Src;isolation-source=stool;lat-lon=25.7479 S 28.2293 E;mol_type=genomic DNA;nat-host=porcine;strain=SG003
JAGETS010000118.1	Genbank	pseudogene	40	960	.	-	.	ID=gene-J4731_24690;Name=J4731_24690;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_24690;pseudo=true
JAGETS010000118.1	Protein Homology	CDS	40	960	.	-	0	ID=cds-J4731_24690;Parent=gene-J4731_24690;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014658161.1;locus_tag=J4731_24690;product=hypothetical protein;pseudo=true;transl_table=11
JAGETS010000118.1	Genbank	gene	1103	1321	.	-	.	ID=gene-J4731_24695;Name=J4731_24695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_24695
JAGETS010000118.1	Protein Homology	CDS	1103	1321	.	-	0	ID=cds-MBO1929979.1;Parent=gene-J4731_24695;Dbxref=NCBI_GP:MBO1929979.1;Name=MBO1929979.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012398.1;locus_tag=J4731_24695;product=aldehyde dehydrogenase family protein;protein_id=MBO1929979.1;transl_table=11
JAGETS010000118.1	Genbank	gene	1545	1745	.	-	.	ID=gene-J4731_24700;Name=J4731_24700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_24700
JAGETS010000118.1	Protein Homology	CDS	1545	1745	.	-	0	ID=cds-MBO1929980.1;Parent=gene-J4731_24700;Dbxref=NCBI_GP:MBO1929980.1;Name=MBO1929980.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012398.1;locus_tag=J4731_24700;product=aldehyde dehydrogenase family protein;protein_id=MBO1929980.1;transl_table=11
##sequence-region JAGETS010000119.1 1 2596
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=587
JAGETS010000119.1	Genbank	region	1	2596	.	+	.	ID=JAGETS010000119.1:1..2596;Dbxref=taxon:587;collected-by=NHLS;collection-date=2018;country=South Africa: Pretoria;gbkey=Src;isolation-source=stool;lat-lon=25.7479 S 28.2293 E;mol_type=genomic DNA;nat-host=porcine;strain=SG003
JAGETS010000119.1	Genbank	pseudogene	942	1775	.	+	.	ID=gene-J4731_24705;Name=J4731_24705;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_24705;pseudo=true
JAGETS010000119.1	Protein Homology	CDS	942	1775	.	+	0	ID=cds-J4731_24705;Parent=gene-J4731_24705;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_858368.1;locus_tag=J4731_24705;product=polysaccharide deacetylase family protein;pseudo=true;transl_table=11
JAGETS010000119.1	Genbank	pseudogene	1762	2596	.	+	.	ID=gene-J4731_24710;Name=J4731_24710;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_24710;pseudo=true
JAGETS010000119.1	Protein Homology	CDS	1762	2596	.	+	0	ID=cds-J4731_24710;Parent=gene-J4731_24710;Note=frameshifted%3B internal stop%3B incomplete%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_858369.1;locus_tag=J4731_24710;product=glycosyltransferase family 1 protein;pseudo=true;transl_table=11
##sequence-region JAGETS010000012.1 1 58893
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=587
JAGETS010000012.1	Genbank	region	1	58893	.	+	.	ID=JAGETS010000012.1:1..58893;Dbxref=taxon:587;collected-by=NHLS;collection-date=2018;country=South Africa: Pretoria;gbkey=Src;isolation-source=stool;lat-lon=25.7479 S 28.2293 E;mol_type=genomic DNA;nat-host=porcine;strain=SG003
JAGETS010000012.1	Genbank	pseudogene	1	359	.	+	.	ID=gene-J4731_06685;Name=J4731_06685;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_06685;pseudo=true
JAGETS010000012.1	Protein Homology	CDS	1	359	.	+	1	ID=cds-J4731_06685;Parent=gene-J4731_06685;Note=frameshifted%3B incomplete%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006813229.1;locus_tag=J4731_06685;product=PspA/IM30 family protein;pseudo=true;transl_table=11
JAGETS010000012.1	Genbank	pseudogene	423	659	.	+	.	ID=gene-J4731_06690;Name=pspB;gbkey=Gene;gene=pspB;gene_biotype=pseudogene;locus_tag=J4731_06690;pseudo=true
JAGETS010000012.1	Protein Homology	CDS	423	659	.	+	0	ID=cds-J4731_06690;Parent=gene-J4731_06690;Note=frameshifted;gbkey=CDS;gene=pspB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006813228.1;locus_tag=J4731_06690;product=envelope stress response membrane protein PspB;pseudo=true;transl_table=11
JAGETS010000012.1	Genbank	pseudogene	659	1004	.	+	.	ID=gene-J4731_06695;Name=J4731_06695;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_06695;pseudo=true
JAGETS010000012.1	Protein Homology	CDS	659	1004	.	+	0	ID=cds-J4731_06695;Parent=gene-J4731_06695;Note=with PsbB forms toxin/antitoxin pair%3B activates the psp operon in response to phage infection%2C exposure to ethanol or osmotic shock%3B frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004263899.1;locus_tag=J4731_06695;product=envelope stress response membrane protein PspC;pseudo=true;transl_table=11
JAGETS010000012.1	Genbank	pseudogene	1342	2728	.	+	.	ID=gene-J4731_06700;Name=J4731_06700;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_06700;pseudo=true
JAGETS010000012.1	Protein Homology	CDS	1342	2728	.	+	0	ID=cds-J4731_06700;Parent=gene-J4731_06700;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008911438.1;locus_tag=J4731_06700;product=YcjX family protein;pseudo=true;transl_table=11
JAGETS010000012.1	Genbank	pseudogene	2725	3794	.	+	.	ID=gene-J4731_06705;Name=J4731_06705;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_06705;pseudo=true
JAGETS010000012.1	Protein Homology	CDS	2725	3794	.	+	0	ID=cds-J4731_06705;Parent=gene-J4731_06705;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008911437.1;locus_tag=J4731_06705;product=TIGR01620 family protein;pseudo=true;transl_table=11
JAGETS010000012.1	Genbank	pseudogene	4085	5569	.	+	.	ID=gene-J4731_06710;Name=tyrR;gbkey=Gene;gene=tyrR;gene_biotype=pseudogene;locus_tag=J4731_06710;pseudo=true
JAGETS010000012.1	Protein Homology	CDS	4085	5569	.	+	0	ID=cds-J4731_06710;Parent=gene-J4731_06710;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;gene=tyrR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013649873.1;locus_tag=J4731_06710;product=transcriptional regulator TyrR;pseudo=true;transl_table=11
JAGETS010000012.1	Genbank	pseudogene	5879	6251	.	+	.	ID=gene-J4731_06715;Name=J4731_06715;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_06715;pseudo=true
JAGETS010000012.1	Protein Homology	CDS	5879	6251	.	+	0	ID=cds-J4731_06715;Parent=gene-J4731_06715;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008911435.1;locus_tag=J4731_06715;product=ATP-binding protein;pseudo=true;transl_table=11
JAGETS010000012.1	Genbank	pseudogene	6330	6830	.	-	.	ID=gene-J4731_06720;Name=tpx;gbkey=Gene;gene=tpx;gene_biotype=pseudogene;locus_tag=J4731_06720;pseudo=true
JAGETS010000012.1	Protein Homology	CDS	6330	6830	.	-	0	ID=cds-J4731_06720;Parent=gene-J4731_06720;Note=frameshifted;gbkey=CDS;gene=tpx;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006660049.1;locus_tag=J4731_06720;product=thiol peroxidase;pseudo=true;transl_table=11
JAGETS010000012.1	Genbank	pseudogene	7546	9160	.	+	.	ID=gene-J4731_06725;Name=J4731_06725;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_06725;pseudo=true
JAGETS010000012.1	Protein Homology	CDS	7546	9160	.	+	0	ID=cds-J4731_06725;Parent=gene-J4731_06725;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006660048.1;locus_tag=J4731_06725;product=peptide ABC transporter substrate-binding protein;pseudo=true;transl_table=11
JAGETS010000012.1	Genbank	pseudogene	9498	10476	.	+	.	ID=gene-J4731_06730;Name=zntB;gbkey=Gene;gene=zntB;gene_biotype=pseudogene;locus_tag=J4731_06730;pseudo=true
JAGETS010000012.1	Protein Homology	CDS	9498	10476	.	+	0	ID=cds-J4731_06730;Parent=gene-J4731_06730;Note=frameshifted%3B internal stop;gbkey=CDS;gene=zntB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006813219.1;locus_tag=J4731_06730;product=zinc transporter ZntB;pseudo=true;transl_table=11
JAGETS010000012.1	Genbank	pseudogene	10792	11639	.	-	.	ID=gene-J4731_06735;Name=ttcA;gbkey=Gene;gene=ttcA;gene_biotype=pseudogene;locus_tag=J4731_06735;pseudo=true
JAGETS010000012.1	Protein Homology	CDS	10792	11639	.	-	0	ID=cds-J4731_06735;Parent=gene-J4731_06735;Note=frameshifted;gbkey=CDS;gene=ttcA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004172694.1;locus_tag=J4731_06735;product=tRNA 2-thiocytidine(32) synthetase TtcA;pseudo=true;transl_table=11
JAGETS010000012.1	Genbank	pseudogene	12996	14031	.	+	.	ID=gene-J4731_06740;Name=J4731_06740;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_06740;pseudo=true
JAGETS010000012.1	Protein Homology	CDS	12996	14031	.	+	0	ID=cds-J4731_06740;Parent=gene-J4731_06740;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004239438.1;locus_tag=J4731_06740;product=nucleoside permease NupC;pseudo=true;transl_table=11
JAGETS010000012.1	Genbank	pseudogene	14054	14971	.	+	.	ID=gene-J4731_06745;Name=J4731_06745;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_06745;pseudo=true
JAGETS010000012.1	Protein Homology	CDS	14054	14971	.	+	0	ID=cds-J4731_06745;Parent=gene-J4731_06745;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006657362.1;locus_tag=J4731_06745;product=nucleoside hydrolase;pseudo=true;transl_table=11
JAGETS010000012.1	Genbank	gene	15502	15624	.	-	.	ID=gene-J4731_06750;Name=J4731_06750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_06750
JAGETS010000012.1	Protein Homology	CDS	15502	15624	.	-	0	ID=cds-MBO1928980.1;Parent=gene-J4731_06750;Dbxref=NCBI_GP:MBO1928980.1;Name=MBO1928980.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012523.1;locus_tag=J4731_06750;product=hypothetical protein;protein_id=MBO1928980.1;transl_table=11
JAGETS010000012.1	Genbank	pseudogene	16798	17454	.	-	.	ID=gene-J4731_06755;Name=J4731_06755;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_06755;pseudo=true
JAGETS010000012.1	Protein Homology	CDS	16798	17454	.	-	0	ID=cds-J4731_06755;Parent=gene-J4731_06755;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004919275.1;locus_tag=J4731_06755;product=amino acid racemase;pseudo=true;transl_table=11
JAGETS010000012.1	Genbank	gene	17784	18191	.	+	.	ID=gene-J4731_06760;Name=J4731_06760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_06760
JAGETS010000012.1	GeneMarkS-2+	CDS	17784	18191	.	+	0	ID=cds-MBO1928981.1;Parent=gene-J4731_06760;Dbxref=NCBI_GP:MBO1928981.1;Name=MBO1928981.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_06760;product=hypothetical protein;protein_id=MBO1928981.1;transl_table=11
JAGETS010000012.1	Genbank	pseudogene	18392	18577	.	+	.	ID=gene-J4731_06765;Name=sra;gbkey=Gene;gene=sra;gene_biotype=pseudogene;locus_tag=J4731_06765;pseudo=true
JAGETS010000012.1	Protein Homology	CDS	18392	18577	.	+	0	ID=cds-J4731_06765;Parent=gene-J4731_06765;Note=frameshifted;gbkey=CDS;gene=sra;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004919289.1;locus_tag=J4731_06765;product=stationary-phase-induced ribosome-associated protein;pseudo=true;transl_table=11
JAGETS010000012.1	Genbank	pseudogene	18805	19574	.	+	.	ID=gene-J4731_06770;Name=J4731_06770;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_06770;pseudo=true
JAGETS010000012.1	Protein Homology	CDS	18805	19574	.	+	0	ID=cds-J4731_06770;Parent=gene-J4731_06770;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008911421.1;locus_tag=J4731_06770;product=synthase of the YaeF/YiiX family protein;pseudo=true;transl_table=11
JAGETS010000012.1	Genbank	pseudogene	19897	20823	.	+	.	ID=gene-J4731_06775;Name=J4731_06775;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_06775;pseudo=true
JAGETS010000012.1	Protein Homology	CDS	19897	20823	.	+	0	ID=cds-J4731_06775;Parent=gene-J4731_06775;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004263974.1;locus_tag=J4731_06775;product=Gfo/Idh/MocA family oxidoreductase;pseudo=true;transl_table=11
JAGETS010000012.1	Genbank	pseudogene	21450	21837	.	+	.	ID=gene-J4731_06780;Name=J4731_06780;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_06780;pseudo=true
JAGETS010000012.1	Protein Homology	CDS	21450	21837	.	+	0	ID=cds-J4731_06780;Parent=gene-J4731_06780;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006660028.1;locus_tag=J4731_06780;product=universal stress protein;pseudo=true;transl_table=11
JAGETS010000012.1	Genbank	pseudogene	21999	22331	.	+	.	ID=gene-J4731_06785;Name=J4731_06785;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_06785;pseudo=true
JAGETS010000012.1	Protein Homology	CDS	21999	22331	.	+	0	ID=cds-J4731_06785;Parent=gene-J4731_06785;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004243204.1;locus_tag=J4731_06785;product=hypothetical protein;pseudo=true;transl_table=11
JAGETS010000012.1	Genbank	pseudogene	22492	22924	.	+	.	ID=gene-J4731_06790;Name=J4731_06790;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_06790;pseudo=true
JAGETS010000012.1	Protein Homology	CDS	22492	22924	.	+	0	ID=cds-J4731_06790;Parent=gene-J4731_06790;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006536488.1;locus_tag=J4731_06790;product=universal stress protein;pseudo=true;transl_table=11
JAGETS010000012.1	Genbank	pseudogene	22962	23289	.	-	.	ID=gene-J4731_06795;Name=J4731_06795;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_06795;pseudo=true
JAGETS010000012.1	Protein Homology	CDS	22962	23289	.	-	0	ID=cds-J4731_06795;Parent=gene-J4731_06795;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004263986.1;locus_tag=J4731_06795;product=hypothetical protein;pseudo=true;transl_table=11
JAGETS010000012.1	Genbank	pseudogene	23504	23897	.	+	.	ID=gene-J4731_06800;Name=J4731_06800;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_06800;pseudo=true
JAGETS010000012.1	Protein Homology	CDS	23504	23897	.	+	0	ID=cds-J4731_06800;Parent=gene-J4731_06800;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006661907.1;locus_tag=J4731_06800;product=hypothetical protein;pseudo=true;transl_table=11
JAGETS010000012.1	Genbank	pseudogene	23899	24471	.	-	.	ID=gene-J4731_06805;Name=J4731_06805;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_06805;pseudo=true
JAGETS010000012.1	Protein Homology	CDS	23899	24471	.	-	0	ID=cds-J4731_06805;Parent=gene-J4731_06805;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008911412.1;locus_tag=J4731_06805;product=TetR/AcrR family transcriptional regulator;pseudo=true;transl_table=11
JAGETS010000012.1	Genbank	pseudogene	24722	25529	.	+	.	ID=gene-J4731_06810;Name=J4731_06810;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_06810;pseudo=true
JAGETS010000012.1	Protein Homology	CDS	24722	25529	.	+	0	ID=cds-J4731_06810;Parent=gene-J4731_06810;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004263992.1;locus_tag=J4731_06810;product=threonine/serine exporter ThrE family protein;pseudo=true;transl_table=11
JAGETS010000012.1	Genbank	pseudogene	25520	25985	.	+	.	ID=gene-J4731_06815;Name=J4731_06815;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_06815;pseudo=true
JAGETS010000012.1	Protein Homology	CDS	25520	25985	.	+	0	ID=cds-J4731_06815;Parent=gene-J4731_06815;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000511337.1;locus_tag=J4731_06815;product=threonine/serine exporter;pseudo=true;transl_table=11
JAGETS010000012.1	Genbank	pseudogene	26280	26980	.	+	.	ID=gene-J4731_06820;Name=J4731_06820;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_06820;pseudo=true
JAGETS010000012.1	Protein Homology	CDS	26280	26980	.	+	0	ID=cds-J4731_06820;Parent=gene-J4731_06820;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000972596.1;locus_tag=J4731_06820;product=endonuclease;pseudo=true;transl_table=11
JAGETS010000012.1	Genbank	pseudogene	27710	28486	.	+	.	ID=gene-J4731_06825;Name=phoH;gbkey=Gene;gene=phoH;gene_biotype=pseudogene;locus_tag=J4731_06825;pseudo=true
JAGETS010000012.1	Protein Homology	CDS	27710	28486	.	+	0	ID=cds-J4731_06825;Parent=gene-J4731_06825;Note=frameshifted;gbkey=CDS;gene=phoH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004919306.1;locus_tag=J4731_06825;product=phosphate starvation-inducible protein PhoH;pseudo=true;transl_table=11
JAGETS010000012.1	Genbank	pseudogene	28559	29197	.	-	.	ID=gene-J4731_06830;Name=zinT;gbkey=Gene;gene=zinT;gene_biotype=pseudogene;locus_tag=J4731_06830;pseudo=true
JAGETS010000012.1	Protein Homology	CDS	28559	29197	.	-	0	ID=cds-J4731_06830;Parent=gene-J4731_06830;Note=frameshifted%3B internal stop;gbkey=CDS;gene=zinT;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003846678.1;locus_tag=J4731_06830;product=metal-binding protein ZinT;pseudo=true;transl_table=11
JAGETS010000012.1	Genbank	pseudogene	29415	30238	.	-	.	ID=gene-J4731_06835;Name=J4731_06835;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_06835;pseudo=true
JAGETS010000012.1	Protein Homology	CDS	29415	30238	.	-	0	ID=cds-J4731_06835;Parent=gene-J4731_06835;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004720605.1;locus_tag=J4731_06835;product=siderophore-interacting protein;pseudo=true;transl_table=11
JAGETS010000012.1	Genbank	gene	30458	30595	.	-	.	ID=gene-J4731_06840;Name=J4731_06840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_06840
JAGETS010000012.1	Protein Homology	CDS	30458	30595	.	-	0	ID=cds-MBO1928982.1;Parent=gene-J4731_06840;Dbxref=NCBI_GP:MBO1928982.1;Name=MBO1928982.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012988574.1;locus_tag=J4731_06840;product=DUF2474 domain-containing protein;protein_id=MBO1928982.1;transl_table=11
JAGETS010000012.1	Genbank	pseudogene	30592	31593	.	-	.	ID=gene-J4731_06845;Name=cydB;gbkey=Gene;gene=cydB;gene_biotype=pseudogene;locus_tag=J4731_06845;pseudo=true
JAGETS010000012.1	Protein Homology	CDS	30592	31593	.	-	0	ID=cds-J4731_06845;Parent=gene-J4731_06845;Note=frameshifted;gbkey=CDS;gene=cydB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005161249.1;locus_tag=J4731_06845;product=cytochrome d ubiquinol oxidase subunit II;pseudo=true;transl_table=11
JAGETS010000012.1	Genbank	pseudogene	31583	32913	.	-	.	ID=gene-J4731_06850;Name=J4731_06850;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_06850;pseudo=true
JAGETS010000012.1	Protein Homology	CDS	31583	32913	.	-	0	ID=cds-J4731_06850;Parent=gene-J4731_06850;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006813199.1;locus_tag=J4731_06850;product=cytochrome ubiquinol oxidase subunit I;pseudo=true;transl_table=11
JAGETS010000012.1	Genbank	pseudogene	33158	34555	.	+	.	ID=gene-J4731_06855;Name=J4731_06855;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_06855;pseudo=true
JAGETS010000012.1	Protein Homology	CDS	33158	34555	.	+	0	ID=cds-J4731_06855;Parent=gene-J4731_06855;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016927377.1;locus_tag=J4731_06855;product=PLP-dependent aminotransferase family protein;pseudo=true;transl_table=11
JAGETS010000012.1	Genbank	pseudogene	34663	35186	.	+	.	ID=gene-J4731_06860;Name=J4731_06860;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_06860;pseudo=true
JAGETS010000012.1	Protein Homology	CDS	34663	35186	.	+	0	ID=cds-J4731_06860;Parent=gene-J4731_06860;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008911401.1;locus_tag=J4731_06860;product=HutD family protein;pseudo=true;transl_table=11
JAGETS010000012.1	Genbank	pseudogene	35183	35806	.	-	.	ID=gene-J4731_06865;Name=J4731_06865;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_06865;pseudo=true
JAGETS010000012.1	Protein Homology	CDS	35183	35806	.	-	0	ID=cds-J4731_06865;Parent=gene-J4731_06865;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004250963.1;locus_tag=J4731_06865;product=LysE family translocator;pseudo=true;transl_table=11
JAGETS010000012.1	Genbank	pseudogene	35958	36429	.	+	.	ID=gene-J4731_06870;Name=J4731_06870;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_06870;pseudo=true
JAGETS010000012.1	Protein Homology	CDS	35958	36429	.	+	0	ID=cds-J4731_06870;Parent=gene-J4731_06870;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004264035.1;locus_tag=J4731_06870;product=Lrp/AsnC family transcriptional regulator;pseudo=true;transl_table=11
JAGETS010000012.1	Genbank	pseudogene	37091	38418	.	+	.	ID=gene-J4731_06875;Name=J4731_06875;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_06875;pseudo=true
JAGETS010000012.1	Protein Homology	CDS	37091	38418	.	+	0	ID=cds-J4731_06875;Parent=gene-J4731_06875;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004238901.1;locus_tag=J4731_06875;product=radical SAM protein;pseudo=true;transl_table=11
JAGETS010000012.1	Genbank	pseudogene	38429	39096	.	+	.	ID=gene-J4731_06880;Name=J4731_06880;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_06880;pseudo=true
JAGETS010000012.1	Protein Homology	CDS	38429	39096	.	+	0	ID=cds-J4731_06880;Parent=gene-J4731_06880;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004264043.1;locus_tag=J4731_06880;product=molecular chaperone TorD family protein;pseudo=true;transl_table=11
JAGETS010000012.1	Genbank	pseudogene	39127	41667	.	+	.	ID=gene-J4731_06885;Name=J4731_06885;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_06885;pseudo=true
JAGETS010000012.1	Protein Homology	CDS	39127	41667	.	+	0	ID=cds-J4731_06885;Parent=gene-J4731_06885;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004235969.1;locus_tag=J4731_06885;product=molybdopterin-dependent oxidoreductase;pseudo=true;transl_table=11
JAGETS010000012.1	Genbank	pseudogene	41681	42212	.	+	.	ID=gene-J4731_06890;Name=J4731_06890;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_06890;pseudo=true
JAGETS010000012.1	Protein Homology	CDS	41681	42212	.	+	0	ID=cds-J4731_06890;Parent=gene-J4731_06890;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004238898.1;locus_tag=J4731_06890;product=4Fe-4S binding protein;pseudo=true;transl_table=11
JAGETS010000012.1	Genbank	pseudogene	42224	43208	.	+	.	ID=gene-J4731_06895;Name=J4731_06895;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_06895;pseudo=true
JAGETS010000012.1	Protein Homology	CDS	42224	43208	.	+	0	ID=cds-J4731_06895;Parent=gene-J4731_06895;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004238897.1;locus_tag=J4731_06895;product=dimethyl sulfoxide reductase anchor subunit;pseudo=true;transl_table=11
JAGETS010000012.1	Genbank	pseudogene	43303	45424	.	+	.	ID=gene-J4731_06900;Name=J4731_06900;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_06900;pseudo=true
JAGETS010000012.1	Protein Homology	CDS	43303	45424	.	+	0	ID=cds-J4731_06900;Parent=gene-J4731_06900;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011815510.1;locus_tag=J4731_06900;product=TonB-dependent siderophore receptor;pseudo=true;transl_table=11
JAGETS010000012.1	Genbank	pseudogene	45427	46561	.	+	.	ID=gene-J4731_06905;Name=J4731_06905;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_06905;pseudo=true
JAGETS010000012.1	Protein Homology	CDS	45427	46561	.	+	0	ID=cds-J4731_06905;Parent=gene-J4731_06905;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008911395.1;locus_tag=J4731_06905;product=ABC transporter substrate-binding protein;pseudo=true;transl_table=11
JAGETS010000012.1	Genbank	pseudogene	46790	47077	.	-	.	ID=gene-J4731_06910;Name=J4731_06910;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_06910;pseudo=true
JAGETS010000012.1	Protein Homology	CDS	46790	47077	.	-	0	ID=cds-J4731_06910;Parent=gene-J4731_06910;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020119.1;locus_tag=J4731_06910;product=antibiotic hydrolase;pseudo=true;transl_table=11
JAGETS010000012.1	Genbank	gene	47271	47576	.	-	.	ID=gene-J4731_06915;Name=J4731_06915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_06915
JAGETS010000012.1	GeneMarkS-2+	CDS	47271	47576	.	-	0	ID=cds-MBO1928983.1;Parent=gene-J4731_06915;Dbxref=NCBI_GP:MBO1928983.1;Name=MBO1928983.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_06915;product=hypothetical protein;protein_id=MBO1928983.1;transl_table=11
JAGETS010000012.1	Genbank	gene	47622	47828	.	-	.	ID=gene-J4731_06920;Name=J4731_06920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_06920
JAGETS010000012.1	GeneMarkS-2+	CDS	47622	47828	.	-	0	ID=cds-MBO1928984.1;Parent=gene-J4731_06920;Dbxref=NCBI_GP:MBO1928984.1;Name=MBO1928984.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_06920;product=hypothetical protein;protein_id=MBO1928984.1;transl_table=11
JAGETS010000012.1	Genbank	gene	47941	48111	.	-	.	ID=gene-J4731_06925;Name=J4731_06925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_06925
JAGETS010000012.1	Protein Homology	CDS	47941	48111	.	-	0	ID=cds-MBO1928985.1;Parent=gene-J4731_06925;Dbxref=NCBI_GP:MBO1928985.1;Name=MBO1928985.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014215.1;locus_tag=J4731_06925;product=hypothetical protein;protein_id=MBO1928985.1;transl_table=11
JAGETS010000012.1	Genbank	gene	48081	48371	.	-	.	ID=gene-J4731_06930;Name=J4731_06930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_06930
JAGETS010000012.1	Protein Homology	CDS	48081	48371	.	-	0	ID=cds-MBO1928986.1;Parent=gene-J4731_06930;Dbxref=NCBI_GP:MBO1928986.1;Name=MBO1928986.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014215.1;locus_tag=J4731_06930;product=hypothetical protein;protein_id=MBO1928986.1;transl_table=11
JAGETS010000012.1	Genbank	pseudogene	48421	49749	.	-	.	ID=gene-J4731_06935;Name=J4731_06935;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_06935;pseudo=true
JAGETS010000012.1	Protein Homology	CDS	48421	49749	.	-	0	ID=cds-J4731_06935;Parent=gene-J4731_06935;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009637147.1;locus_tag=J4731_06935;product=YfcC family protein;pseudo=true;transl_table=11
JAGETS010000012.1	Genbank	gene	49898	50062	.	-	.	ID=gene-J4731_06940;Name=J4731_06940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_06940
JAGETS010000012.1	Protein Homology	CDS	49898	50062	.	-	0	ID=cds-MBO1928987.1;Parent=gene-J4731_06940;Dbxref=NCBI_GP:MBO1928987.1;Name=MBO1928987.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013757.1;locus_tag=J4731_06940;product=hypothetical protein;protein_id=MBO1928987.1;transl_table=11
JAGETS010000012.1	Genbank	gene	50069	50341	.	-	.	ID=gene-J4731_06945;Name=J4731_06945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_06945
JAGETS010000012.1	GeneMarkS-2+	CDS	50069	50341	.	-	0	ID=cds-MBO1928988.1;Parent=gene-J4731_06945;Dbxref=NCBI_GP:MBO1928988.1;Name=MBO1928988.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_06945;product=hypothetical protein;protein_id=MBO1928988.1;transl_table=11
JAGETS010000012.1	Genbank	gene	50316	50552	.	-	.	ID=gene-J4731_06950;Name=J4731_06950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_06950
JAGETS010000012.1	Protein Homology	CDS	50316	50552	.	-	0	ID=cds-MBO1928989.1;Parent=gene-J4731_06950;Dbxref=NCBI_GP:MBO1928989.1;Name=MBO1928989.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014080.1;locus_tag=J4731_06950;product=helix-turn-helix domain-containing protein;protein_id=MBO1928989.1;transl_table=11
JAGETS010000012.1	Genbank	pseudogene	51007	51979	.	+	.	ID=gene-J4731_06955;Name=J4731_06955;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_06955;pseudo=true
JAGETS010000012.1	Protein Homology	CDS	51007	51979	.	+	0	ID=cds-J4731_06955;Parent=gene-J4731_06955;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004264085.1;locus_tag=J4731_06955;product=Gfo/Idh/MocA family oxidoreductase;pseudo=true;transl_table=11
JAGETS010000012.1	Genbank	pseudogene	52013	53655	.	-	.	ID=gene-J4731_06960;Name=J4731_06960;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_06960;pseudo=true
JAGETS010000012.1	Protein Homology	CDS	52013	53655	.	-	0	ID=cds-J4731_06960;Parent=gene-J4731_06960;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014658259.1;locus_tag=J4731_06960;product=alpha-keto acid decarboxylase family protein;pseudo=true;transl_table=11
JAGETS010000012.1	Genbank	pseudogene	53777	54666	.	+	.	ID=gene-J4731_06965;Name=J4731_06965;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_06965;pseudo=true
JAGETS010000012.1	Protein Homology	CDS	53777	54666	.	+	0	ID=cds-J4731_06965;Parent=gene-J4731_06965;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004251865.1;locus_tag=J4731_06965;product=LysR family transcriptional regulator;pseudo=true;transl_table=11
JAGETS010000012.1	Genbank	pseudogene	54932	56507	.	+	.	ID=gene-J4731_06970;Name=J4731_06970;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_06970;pseudo=true
JAGETS010000012.1	Protein Homology	CDS	54932	56507	.	+	0	ID=cds-J4731_06970;Parent=gene-J4731_06970;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015670679.1;locus_tag=J4731_06970;product=GMC family oxidoreductase N-terminal domain-containing protein;pseudo=true;transl_table=11
JAGETS010000012.1	Genbank	pseudogene	57003	58503	.	-	.	ID=gene-J4731_06975;Name=J4731_06975;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_06975;pseudo=true
JAGETS010000012.1	Protein Homology	CDS	57003	58503	.	-	0	ID=cds-J4731_06975;Parent=gene-J4731_06975;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012088182.1;locus_tag=J4731_06975;product=IS66 family transposase;pseudo=true;transl_table=11
JAGETS010000012.1	Genbank	gene	58587	58835	.	-	.	ID=gene-J4731_06980;Name=tnpB;gbkey=Gene;gene=tnpB;gene_biotype=protein_coding;locus_tag=J4731_06980
JAGETS010000012.1	Protein Homology	CDS	58587	58835	.	-	0	ID=cds-MBO1928990.1;Parent=gene-J4731_06980;Dbxref=NCBI_GP:MBO1928990.1;Name=MBO1928990.1;gbkey=CDS;gene=tnpB;inference=COORDINATES: protein motif:HMM:NF017528.1;locus_tag=J4731_06980;product=IS66 family insertion sequence element accessory protein TnpB;protein_id=MBO1928990.1;transl_table=11
##sequence-region JAGETS010000120.1 1 1516
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=587
JAGETS010000120.1	Genbank	region	1	1516	.	+	.	ID=JAGETS010000120.1:1..1516;Dbxref=taxon:587;collected-by=NHLS;collection-date=2018;country=South Africa: Pretoria;gbkey=Src;isolation-source=stool;lat-lon=25.7479 S 28.2293 E;mol_type=genomic DNA;nat-host=porcine;strain=SG003
JAGETS010000120.1	Genbank	gene	213	356	.	-	.	ID=gene-J4731_24715;Name=J4731_24715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_24715
JAGETS010000120.1	GeneMarkS-2+	CDS	213	356	.	-	0	ID=cds-MBO1929981.1;Parent=gene-J4731_24715;Dbxref=NCBI_GP:MBO1929981.1;Name=MBO1929981.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_24715;product=hypothetical protein;protein_id=MBO1929981.1;transl_table=11
JAGETS010000120.1	Genbank	pseudogene	1176	1516	.	-	.	ID=gene-J4731_24720;Name=J4731_24720;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_24720;pseudo=true
JAGETS010000120.1	Protein Homology	CDS	1176	1516	.	-	2	ID=cds-J4731_24720;Parent=gene-J4731_24720;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000729822.1;locus_tag=J4731_24720;product=hypothetical protein;pseudo=true;transl_table=11
##sequence-region JAGETS010000121.1 1 126103
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=587
JAGETS010000121.1	Genbank	region	1	126103	.	+	.	ID=JAGETS010000121.1:1..126103;Dbxref=taxon:587;collected-by=NHLS;collection-date=2018;country=South Africa: Pretoria;gbkey=Src;isolation-source=stool;lat-lon=25.7479 S 28.2293 E;mol_type=genomic DNA;nat-host=porcine;strain=SG003
JAGETS010000121.1	Genbank	pseudogene	17	671	.	+	.	ID=gene-J4731_24725;Name=rsmG;gbkey=Gene;gene=rsmG;gene_biotype=pseudogene;locus_tag=J4731_24725;pseudo=true
JAGETS010000121.1	Protein Homology	CDS	17	671	.	+	0	ID=cds-J4731_24725;Parent=gene-J4731_24725;Note=frameshifted%3B internal stop;gbkey=CDS;gene=rsmG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006660654.1;locus_tag=J4731_24725;product=16S rRNA (guanine(527)-N(7))-methyltransferase RsmG;pseudo=true;transl_table=11
JAGETS010000121.1	Genbank	pseudogene	1221	1584	.	+	.	ID=gene-J4731_24730;Name=atpI;gbkey=Gene;gene=atpI;gene_biotype=pseudogene;locus_tag=J4731_24730;pseudo=true
JAGETS010000121.1	Protein Homology	CDS	1221	1584	.	+	0	ID=cds-J4731_24730;Parent=gene-J4731_24730;Note=frameshifted;gbkey=CDS;gene=atpI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008913706.1;locus_tag=J4731_24730;product=F0F1 ATP synthase subunit I;pseudo=true;transl_table=11
JAGETS010000121.1	Genbank	pseudogene	1704	2421	.	+	.	ID=gene-J4731_24735;Name=atpB;gbkey=Gene;gene=atpB;gene_biotype=pseudogene;locus_tag=J4731_24735;pseudo=true
JAGETS010000121.1	Protein Homology	CDS	1704	2421	.	+	0	ID=cds-J4731_24735;Parent=gene-J4731_24735;Note=frameshifted%3B internal stop;gbkey=CDS;gene=atpB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004703875.1;locus_tag=J4731_24735;product=F0F1 ATP synthase subunit A;pseudo=true;transl_table=11
JAGETS010000121.1	Genbank	gene	2470	2709	.	+	.	ID=gene-J4731_24740;Name=atpE;gbkey=Gene;gene=atpE;gene_biotype=protein_coding;locus_tag=J4731_24740
JAGETS010000121.1	Protein Homology	CDS	2470	2709	.	+	0	ID=cds-MBO1929982.1;Parent=gene-J4731_24740;Dbxref=NCBI_GP:MBO1929982.1;Name=MBO1929982.1;gbkey=CDS;gene=atpE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246596.1;locus_tag=J4731_24740;product=F0F1 ATP synthase subunit C;protein_id=MBO1929982.1;transl_table=11
JAGETS010000121.1	Genbank	pseudogene	2768	3251	.	+	.	ID=gene-J4731_24745;Name=atpF;gbkey=Gene;gene=atpF;gene_biotype=pseudogene;locus_tag=J4731_24745;pseudo=true
JAGETS010000121.1	Protein Homology	CDS	2768	3251	.	+	0	ID=cds-J4731_24745;Parent=gene-J4731_24745;Note=frameshifted;gbkey=CDS;gene=atpF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001052215.1;locus_tag=J4731_24745;product=F0F1 ATP synthase subunit B;pseudo=true;transl_table=11
JAGETS010000121.1	Genbank	pseudogene	3244	3775	.	+	.	ID=gene-J4731_24750;Name=atpH;gbkey=Gene;gene=atpH;gene_biotype=pseudogene;locus_tag=J4731_24750;pseudo=true
JAGETS010000121.1	Protein Homology	CDS	3244	3775	.	+	0	ID=cds-J4731_24750;Parent=gene-J4731_24750;Note=frameshifted;gbkey=CDS;gene=atpH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312704.1;locus_tag=J4731_24750;product=F0F1 ATP synthase subunit delta;pseudo=true;transl_table=11
JAGETS010000121.1	Genbank	pseudogene	3790	5299	.	+	.	ID=gene-J4731_24755;Name=atpA;gbkey=Gene;gene=atpA;gene_biotype=pseudogene;locus_tag=J4731_24755;pseudo=true
JAGETS010000121.1	Protein Homology	CDS	3790	5299	.	+	0	ID=cds-J4731_24755;Parent=gene-J4731_24755;Note=frameshifted;gbkey=CDS;gene=atpA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004351897.1;locus_tag=J4731_24755;product=F0F1 ATP synthase subunit alpha;pseudo=true;transl_table=11
JAGETS010000121.1	Genbank	pseudogene	5437	6206	.	+	.	ID=gene-J4731_24760;Name=atpG;gbkey=Gene;gene=atpG;gene_biotype=pseudogene;locus_tag=J4731_24760;pseudo=true
JAGETS010000121.1	Protein Homology	CDS	5437	6206	.	+	0	ID=cds-J4731_24760;Parent=gene-J4731_24760;Note=frameshifted;gbkey=CDS;gene=atpG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020882764.1;locus_tag=J4731_24760;product=F0F1 ATP synthase subunit gamma;pseudo=true;transl_table=11
JAGETS010000121.1	Genbank	pseudogene	6350	7598	.	+	.	ID=gene-J4731_24765;Name=atpD;gbkey=Gene;gene=atpD;gene_biotype=pseudogene;locus_tag=J4731_24765;pseudo=true
JAGETS010000121.1	Protein Homology	CDS	6350	7598	.	+	0	ID=cds-J4731_24765;Parent=gene-J4731_24765;Note=frameshifted;gbkey=CDS;gene=atpD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004393022.1;locus_tag=J4731_24765;product=F0F1 ATP synthase subunit beta;pseudo=true;transl_table=11
JAGETS010000121.1	Genbank	pseudogene	7632	8037	.	+	.	ID=gene-J4731_24770;Name=atpC;gbkey=Gene;gene=atpC;gene_biotype=pseudogene;locus_tag=J4731_24770;pseudo=true
JAGETS010000121.1	Protein Homology	CDS	7632	8037	.	+	0	ID=cds-J4731_24770;Parent=gene-J4731_24770;Note=frameshifted;gbkey=CDS;gene=atpC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229606.1;locus_tag=J4731_24770;product=F0F1 ATP synthase subunit epsilon;pseudo=true;transl_table=11
JAGETS010000121.1	Genbank	pseudogene	8262	9517	.	+	.	ID=gene-J4731_24775;Name=glmU;gbkey=Gene;gene=glmU;gene_biotype=pseudogene;locus_tag=J4731_24775;pseudo=true
JAGETS010000121.1	Protein Homology	CDS	8262	9517	.	+	0	ID=cds-J4731_24775;Parent=gene-J4731_24775;Note=frameshifted;gbkey=CDS;gene=glmU;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004703880.1;locus_tag=J4731_24775;product=bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU;pseudo=true;transl_table=11
JAGETS010000121.1	Genbank	pseudogene	9718	11541	.	+	.	ID=gene-J4731_24780;Name=glmS;gbkey=Gene;gene=glmS;gene_biotype=pseudogene;locus_tag=J4731_24780;pseudo=true
JAGETS010000121.1	Protein Homology	CDS	9718	11541	.	+	0	ID=cds-J4731_24780;Parent=gene-J4731_24780;Note=frameshifted;gbkey=CDS;gene=glmS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121462.1;locus_tag=J4731_24780;product=glutamine--fructose-6-phosphate transaminase (isomerizing);pseudo=true;transl_table=11
JAGETS010000121.1	Genbank	pseudogene	11700	12517	.	+	.	ID=gene-J4731_24785;Name=J4731_24785;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_24785;pseudo=true
JAGETS010000121.1	Protein Homology	CDS	11700	12517	.	+	0	ID=cds-J4731_24785;Parent=gene-J4731_24785;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001029679.1;locus_tag=J4731_24785;product=heteromeric transposase endonuclease subunit TnsA;pseudo=true;transl_table=11
JAGETS010000121.1	Genbank	pseudogene	12504	14602	.	+	.	ID=gene-J4731_24790;Name=J4731_24790;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_24790;pseudo=true
JAGETS010000121.1	Protein Homology	CDS	12504	14602	.	+	0	ID=cds-J4731_24790;Parent=gene-J4731_24790;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000267723.1;locus_tag=J4731_24790;product=transposase family protein;pseudo=true;transl_table=11
JAGETS010000121.1	Genbank	pseudogene	14599	16250	.	+	.	ID=gene-J4731_24795;Name=J4731_24795;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_24795;pseudo=true
JAGETS010000121.1	Protein Homology	CDS	14599	16250	.	+	0	ID=cds-J4731_24795;Parent=gene-J4731_24795;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001276994.1;locus_tag=J4731_24795;product=AAA family ATPase;pseudo=true;transl_table=11
JAGETS010000121.1	Genbank	pseudogene	16253	17780	.	+	.	ID=gene-J4731_24800;Name=J4731_24800;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_24800;pseudo=true
JAGETS010000121.1	Protein Homology	CDS	16253	17780	.	+	0	ID=cds-J4731_24800;Parent=gene-J4731_24800;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001243518.1;locus_tag=J4731_24800;product=TniQ family protein;pseudo=true;transl_table=11
JAGETS010000121.1	Genbank	pseudogene	17872	18649	.	-	.	ID=gene-J4731_24805;Name=istB;gbkey=Gene;gene=istB;gene_biotype=pseudogene;locus_tag=J4731_24805;pseudo=true
JAGETS010000121.1	Protein Homology	CDS	17872	18649	.	-	0	ID=cds-J4731_24805;Parent=gene-J4731_24805;Note=frameshifted;gbkey=CDS;gene=istB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_858162.1;locus_tag=J4731_24805;product=IS21-like element helper ATPase IstB;pseudo=true;transl_table=11
JAGETS010000121.1	Genbank	pseudogene	18646	19665	.	-	.	ID=gene-J4731_24810;Name=istA;gbkey=Gene;gene=istA;gene_biotype=pseudogene;locus_tag=J4731_24810;pseudo=true
JAGETS010000121.1	Protein Homology	CDS	18646	19665	.	-	0	ID=cds-J4731_24810;Parent=gene-J4731_24810;Note=frameshifted;gbkey=CDS;gene=istA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000627495.1;locus_tag=J4731_24810;product=IS21 family transposase;pseudo=true;transl_table=11
JAGETS010000121.1	Genbank	pseudogene	19761	21326	.	+	.	ID=gene-J4731_24815;Name=J4731_24815;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_24815;pseudo=true
JAGETS010000121.1	Protein Homology	CDS	19761	21326	.	+	0	ID=cds-J4731_24815;Parent=gene-J4731_24815;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000251878.1;locus_tag=J4731_24815;product=transcriptional antiterminator;pseudo=true;transl_table=11
JAGETS010000121.1	Genbank	pseudogene	21374	21525	.	-	.	ID=gene-J4731_24820;Name=J4731_24820;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_24820;pseudo=true
JAGETS010000121.1	Protein Homology	CDS	21374	21525	.	-	0	ID=cds-J4731_24820;Parent=gene-J4731_24820;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011069623.1;locus_tag=J4731_24820;product=transposase;pseudo=true;transl_table=11
JAGETS010000121.1	Genbank	pseudogene	21548	21922	.	-	.	ID=gene-J4731_24825;Name=J4731_24825;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_24825;pseudo=true
JAGETS010000121.1	Protein Homology	CDS	21548	21922	.	-	0	ID=cds-J4731_24825;Parent=gene-J4731_24825;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001271300.1;locus_tag=J4731_24825;product=hypothetical protein;pseudo=true;transl_table=11
JAGETS010000121.1	Genbank	pseudogene	22332	22647	.	-	.	ID=gene-J4731_24830;Name=J4731_24830;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_24830;pseudo=true
JAGETS010000121.1	Protein Homology	CDS	22332	22647	.	-	0	ID=cds-J4731_24830;Parent=gene-J4731_24830;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000119696.1;locus_tag=J4731_24830;product=hypothetical protein;pseudo=true;transl_table=11
JAGETS010000121.1	Genbank	gene	23093	23254	.	-	.	ID=gene-J4731_24835;Name=J4731_24835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_24835
JAGETS010000121.1	GeneMarkS-2+	CDS	23093	23254	.	-	0	ID=cds-MBO1929983.1;Parent=gene-J4731_24835;Dbxref=NCBI_GP:MBO1929983.1;Name=MBO1929983.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_24835;product=hypothetical protein;protein_id=MBO1929983.1;transl_table=11
JAGETS010000121.1	Genbank	pseudogene	23329	24115	.	-	.	ID=gene-J4731_24840;Name=J4731_24840;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_24840;pseudo=true
JAGETS010000121.1	Protein Homology	CDS	23329	24115	.	-	0	ID=cds-J4731_24840;Parent=gene-J4731_24840;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001424636.1;locus_tag=J4731_24840;product=AadA family aminoglycoside 3''-O-nucleotidyltransferase;pseudo=true;transl_table=11
JAGETS010000121.1	Genbank	gene	24173	24694	.	-	.	ID=gene-J4731_24845;Name=sat2;gbkey=Gene;gene=sat2;gene_biotype=protein_coding;locus_tag=J4731_24845
JAGETS010000121.1	Protein Homology	CDS	24173	24694	.	-	0	ID=cds-MBO1929984.1;Parent=gene-J4731_24845;Dbxref=NCBI_GP:MBO1929984.1;Name=MBO1929984.1;gbkey=CDS;gene=sat2;inference=COORDINATES: protein motif:HMM:NF000358.1;locus_tag=J4731_24845;product=streptothricin N-acetyltransferase Sat2;protein_id=MBO1929984.1;transl_table=11
JAGETS010000121.1	Genbank	pseudogene	24788	25260	.	-	.	ID=gene-J4731_24850;Name=dfrA1;gbkey=Gene;gene=dfrA1;gene_biotype=pseudogene;locus_tag=J4731_24850;pseudo=true
JAGETS010000121.1	Protein Homology	CDS	24788	25260	.	-	0	ID=cds-J4731_24850;Parent=gene-J4731_24850;Note=frameshifted;gbkey=CDS;gene=dfrA1;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001355915.1;locus_tag=J4731_24850;product=trimethoprim-resistant dihydrofolate reductase DfrA1;pseudo=true;transl_table=11
JAGETS010000121.1	Genbank	gene	25724	26131	.	+	.	ID=gene-J4731_24855;Name=J4731_24855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_24855
JAGETS010000121.1	Protein Homology	CDS	25724	26131	.	+	0	ID=cds-MBO1929985.1;Parent=gene-J4731_24855;Dbxref=NCBI_GP:MBO1929985.1;Name=MBO1929985.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024886.1;locus_tag=J4731_24855;product=phage integrase N-terminal SAM-like domain-containing protein;protein_id=MBO1929985.1;transl_table=11
JAGETS010000121.1	Genbank	pseudogene	26237	26562	.	+	.	ID=gene-J4731_24860;Name=J4731_24860;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_24860;pseudo=true
JAGETS010000121.1	Protein Homology	CDS	26237	26562	.	+	0	ID=cds-J4731_24860;Parent=gene-J4731_24860;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000497519.1;locus_tag=J4731_24860;product=tyrosine-type recombinase/integrase;pseudo=true;transl_table=11
JAGETS010000121.1	Genbank	pseudogene	26749	26985	.	-	.	ID=gene-J4731_24865;Name=J4731_24865;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_24865;pseudo=true
JAGETS010000121.1	Protein Homology	CDS	26749	26985	.	-	0	ID=cds-J4731_24865;Parent=gene-J4731_24865;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001353740.1;locus_tag=J4731_24865;product=DUF1819 family protein;pseudo=true;transl_table=11
JAGETS010000121.1	Genbank	pseudogene	27541	27950	.	-	.	ID=gene-J4731_24870;Name=J4731_24870;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_24870;pseudo=true
JAGETS010000121.1	Protein Homology	CDS	27541	27950	.	-	0	ID=cds-J4731_24870;Parent=gene-J4731_24870;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004924000.1;locus_tag=J4731_24870;product=ParB N-terminal domain-containing protein;pseudo=true;transl_table=11
JAGETS010000121.1	Genbank	pseudogene	27971	29103	.	-	.	ID=gene-J4731_24875;Name=J4731_24875;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_24875;pseudo=true
JAGETS010000121.1	Protein Homology	CDS	27971	29103	.	-	0	ID=cds-J4731_24875;Parent=gene-J4731_24875;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004924003.1;locus_tag=J4731_24875;product=ABC transporter substrate-binding protein;pseudo=true;transl_table=11
JAGETS010000121.1	Genbank	pseudogene	29087	30284	.	-	.	ID=gene-J4731_24880;Name=J4731_24880;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_24880;pseudo=true
JAGETS010000121.1	Protein Homology	CDS	29087	30284	.	-	0	ID=cds-J4731_24880;Parent=gene-J4731_24880;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014657145.1;locus_tag=J4731_24880;product=MFS transporter;pseudo=true;transl_table=11
JAGETS010000121.1	Genbank	pseudogene	30351	31443	.	-	.	ID=gene-J4731_24885;Name=J4731_24885;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_24885;pseudo=true
JAGETS010000121.1	Protein Homology	CDS	30351	31443	.	-	0	ID=cds-J4731_24885;Parent=gene-J4731_24885;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012367522.1;locus_tag=J4731_24885;product=NAD/NADP octopine/nopaline dehydrogenase family protein;pseudo=true;transl_table=11
JAGETS010000121.1	Genbank	pseudogene	31454	32454	.	-	.	ID=gene-J4731_24890;Name=J4731_24890;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_24890;pseudo=true
JAGETS010000121.1	Protein Homology	CDS	31454	32454	.	-	0	ID=cds-J4731_24890;Parent=gene-J4731_24890;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011095585.1;locus_tag=J4731_24890;product=cysteine synthase family protein;pseudo=true;transl_table=11
JAGETS010000121.1	Genbank	pseudogene	32463	33856	.	-	.	ID=gene-J4731_24895;Name=J4731_24895;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_24895;pseudo=true
JAGETS010000121.1	Protein Homology	CDS	32463	33856	.	-	0	ID=cds-J4731_24895;Parent=gene-J4731_24895;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004924014.1;locus_tag=J4731_24895;product=Y4yA family PLP-dependent enzyme;pseudo=true;transl_table=11
JAGETS010000121.1	Genbank	pseudogene	33869	35887	.	-	.	ID=gene-J4731_24900;Name=J4731_24900;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_24900;pseudo=true
JAGETS010000121.1	Protein Homology	CDS	33869	35887	.	-	0	ID=cds-J4731_24900;Parent=gene-J4731_24900;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004924020.1;locus_tag=J4731_24900;product=TonB-dependent siderophore receptor;pseudo=true;transl_table=11
JAGETS010000121.1	Genbank	gene	36115	36894	.	-	.	ID=gene-J4731_24905;Name=J4731_24905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_24905
JAGETS010000121.1	Protein Homology	CDS	36115	36894	.	-	0	ID=cds-MBO1929986.1;Parent=gene-J4731_24905;Dbxref=NCBI_GP:MBO1929986.1;Name=MBO1929986.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018031.1;locus_tag=J4731_24905;product=hypothetical protein;protein_id=MBO1929986.1;transl_table=11
JAGETS010000121.1	Genbank	gene	37158	37532	.	-	.	ID=gene-J4731_24910;Name=J4731_24910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_24910
JAGETS010000121.1	Protein Homology	CDS	37158	37532	.	-	0	ID=cds-MBO1929987.1;Parent=gene-J4731_24910;Dbxref=NCBI_GP:MBO1929987.1;Name=MBO1929987.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016099.1;locus_tag=J4731_24910;product=hypothetical protein;protein_id=MBO1929987.1;transl_table=11
JAGETS010000121.1	Genbank	gene	38554	38799	.	+	.	ID=gene-J4731_24915;Name=J4731_24915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_24915
JAGETS010000121.1	GeneMarkS-2+	CDS	38554	38799	.	+	0	ID=cds-MBO1929988.1;Parent=gene-J4731_24915;Dbxref=NCBI_GP:MBO1929988.1;Name=MBO1929988.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_24915;product=hypothetical protein;protein_id=MBO1929988.1;transl_table=11
JAGETS010000121.1	Genbank	gene	38865	39164	.	+	.	ID=gene-J4731_24920;Name=J4731_24920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_24920
JAGETS010000121.1	GeneMarkS-2+	CDS	38865	39164	.	+	0	ID=cds-MBO1929989.1;Parent=gene-J4731_24920;Dbxref=NCBI_GP:MBO1929989.1;Name=MBO1929989.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_24920;product=hypothetical protein;protein_id=MBO1929989.1;transl_table=11
JAGETS010000121.1	Genbank	gene	39315	39701	.	+	.	ID=gene-J4731_24925;Name=J4731_24925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_24925
JAGETS010000121.1	GeneMarkS-2+	CDS	39315	39701	.	+	0	ID=cds-MBO1929990.1;Parent=gene-J4731_24925;Dbxref=NCBI_GP:MBO1929990.1;Name=MBO1929990.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_24925;product=hypothetical protein;protein_id=MBO1929990.1;transl_table=11
JAGETS010000121.1	Genbank	pseudogene	40756	41308	.	-	.	ID=gene-J4731_24930;Name=J4731_24930;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_24930;pseudo=true
JAGETS010000121.1	Protein Homology	CDS	40756	41308	.	-	0	ID=cds-J4731_24930;Parent=gene-J4731_24930;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004906277.1;locus_tag=J4731_24930;product=TetR/AcrR family transcriptional regulator;pseudo=true;transl_table=11
JAGETS010000121.1	Genbank	pseudogene	41404	42872	.	+	.	ID=gene-J4731_24935;Name=J4731_24935;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_24935;pseudo=true
JAGETS010000121.1	Protein Homology	CDS	41404	42872	.	+	0	ID=cds-J4731_24935;Parent=gene-J4731_24935;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004249028.1;locus_tag=J4731_24935;product=MFS transporter;pseudo=true;transl_table=11
JAGETS010000121.1	Genbank	pseudogene	42939	44340	.	-	.	ID=gene-J4731_24940;Name=J4731_24940;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_24940;pseudo=true
JAGETS010000121.1	Protein Homology	CDS	42939	44340	.	-	0	ID=cds-J4731_24940;Parent=gene-J4731_24940;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014657151.1;locus_tag=J4731_24940;product=MFS transporter;pseudo=true;transl_table=11
JAGETS010000121.1	Genbank	pseudogene	44413	45069	.	+	.	ID=gene-J4731_24945;Name=J4731_24945;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_24945;pseudo=true
JAGETS010000121.1	Protein Homology	CDS	44413	45069	.	+	0	ID=cds-J4731_24945;Parent=gene-J4731_24945;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004906271.1;locus_tag=J4731_24945;product=transcriptional regulator;pseudo=true;transl_table=11
JAGETS010000121.1	Genbank	pseudogene	45076	45635	.	-	.	ID=gene-J4731_24950;Name=J4731_24950;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_24950;pseudo=true
JAGETS010000121.1	Protein Homology	CDS	45076	45635	.	-	0	ID=cds-J4731_24950;Parent=gene-J4731_24950;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004906266.1;locus_tag=J4731_24950;product=rhomboid family intramembrane serine protease;pseudo=true;transl_table=11
JAGETS010000121.1	Genbank	pseudogene	45635	50513	.	-	.	ID=gene-J4731_24955;Name=J4731_24955;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_24955;pseudo=true
JAGETS010000121.1	Protein Homology	CDS	45635	50513	.	-	0	ID=cds-J4731_24955;Parent=gene-J4731_24955;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004906265.1;locus_tag=J4731_24955;product=DNA repair ATPase;pseudo=true;transl_table=11
JAGETS010000121.1	Genbank	pseudogene	50594	52782	.	-	.	ID=gene-J4731_24960;Name=J4731_24960;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_24960;pseudo=true
JAGETS010000121.1	Protein Homology	CDS	50594	52782	.	-	0	ID=cds-J4731_24960;Parent=gene-J4731_24960;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004924051.1;locus_tag=J4731_24960;product=hypothetical protein;pseudo=true;transl_table=11
JAGETS010000121.1	Genbank	pseudogene	52857	53462	.	-	.	ID=gene-J4731_24965;Name=J4731_24965;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_24965;pseudo=true
JAGETS010000121.1	Protein Homology	CDS	52857	53462	.	-	0	ID=cds-J4731_24965;Parent=gene-J4731_24965;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004906263.1;locus_tag=J4731_24965;product=DUF1449 family protein;pseudo=true;transl_table=11
JAGETS010000121.1	Genbank	pseudogene	53874	54780	.	-	.	ID=gene-J4731_24970;Name=nagK;gbkey=Gene;gene=nagK;gene_biotype=pseudogene;locus_tag=J4731_24970;pseudo=true
JAGETS010000121.1	Protein Homology	CDS	53874	54780	.	-	0	ID=cds-J4731_24970;Parent=gene-J4731_24970;Note=frameshifted;gbkey=CDS;gene=nagK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006660625.1;locus_tag=J4731_24970;product=N-acetylglucosamine kinase;pseudo=true;transl_table=11
JAGETS010000121.1	Genbank	pseudogene	56442	56833	.	+	.	ID=gene-J4731_24975;Name=J4731_24975;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_24975;pseudo=true
JAGETS010000121.1	Protein Homology	CDS	56442	56833	.	+	0	ID=cds-J4731_24975;Parent=gene-J4731_24975;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005163438.1;locus_tag=J4731_24975;product=type B 50S ribosomal protein L31;pseudo=true;transl_table=11
JAGETS010000121.1	Genbank	gene	56742	56993	.	+	.	ID=gene-J4731_24980;Name=rpmJ;gbkey=Gene;gene=rpmJ;gene_biotype=protein_coding;locus_tag=J4731_24980
JAGETS010000121.1	Protein Homology	CDS	56742	56993	.	+	0	ID=cds-MBO1929991.1;Parent=gene-J4731_24980;Dbxref=NCBI_GP:MBO1929991.1;Name=MBO1929991.1;gbkey=CDS;gene=rpmJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004744821.1;locus_tag=J4731_24980;product=50S ribosomal protein L36;protein_id=MBO1929991.1;transl_table=11
JAGETS010000121.1	Genbank	pseudogene	57211	58313	.	+	.	ID=gene-J4731_24985;Name=asd;gbkey=Gene;gene=asd;gene_biotype=pseudogene;locus_tag=J4731_24985;pseudo=true
JAGETS010000121.1	Protein Homology	CDS	57211	58313	.	+	0	ID=cds-J4731_24985;Parent=gene-J4731_24985;Note=frameshifted;gbkey=CDS;gene=asd;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009111079.1;locus_tag=J4731_24985;product=aspartate-semialdehyde dehydrogenase;pseudo=true;transl_table=11
JAGETS010000121.1	Genbank	pseudogene	58384	58634	.	-	.	ID=gene-J4731_24990;Name=J4731_24990;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_24990;pseudo=true
JAGETS010000121.1	Protein Homology	CDS	58384	58634	.	-	0	ID=cds-J4731_24990;Parent=gene-J4731_24990;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006662105.1;locus_tag=J4731_24990;product=DUF1622 domain-containing protein;pseudo=true;transl_table=11
JAGETS010000121.1	Genbank	pseudogene	58794	60364	.	-	.	ID=gene-J4731_24995;Name=J4731_24995;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_24995;pseudo=true
JAGETS010000121.1	Protein Homology	CDS	58794	60364	.	-	0	ID=cds-J4731_24995;Parent=gene-J4731_24995;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004906254.1;locus_tag=J4731_24995;product=phosphoethanolamine transferase;pseudo=true;transl_table=11
JAGETS010000121.1	Genbank	gene	60579	61256	.	-	.	ID=gene-J4731_25000;Name=J4731_25000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_25000
JAGETS010000121.1	Protein Homology	CDS	60579	61256	.	-	0	ID=cds-MBO1929992.1;Parent=gene-J4731_25000;Dbxref=NCBI_GP:MBO1929992.1;Name=MBO1929992.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR01414.1;locus_tag=J4731_25000;product=autotransporter outer membrane beta-barrel domain-containing protein;protein_id=MBO1929992.1;transl_table=11
JAGETS010000121.1	Genbank	gene	61253	62590	.	-	.	ID=gene-J4731_25005;Name=J4731_25005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_25005
JAGETS010000121.1	Protein Homology	CDS	61253	62590	.	-	0	ID=cds-MBO1929993.1;Parent=gene-J4731_25005;Dbxref=NCBI_GP:MBO1929993.1;Name=MBO1929993.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015038821.1;locus_tag=J4731_25005;product=autotransporter-associated beta strand repeat-containing protein;protein_id=MBO1929993.1;transl_table=11
JAGETS010000121.1	Genbank	gene	62722	63039	.	-	.	ID=gene-J4731_25010;Name=J4731_25010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_25010
JAGETS010000121.1	Protein Homology	CDS	62722	63039	.	-	0	ID=cds-MBO1929994.1;Parent=gene-J4731_25010;Dbxref=NCBI_GP:MBO1929994.1;Name=MBO1929994.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013718.1;locus_tag=J4731_25010;product=phosphatase PAP2 family protein;protein_id=MBO1929994.1;transl_table=11
JAGETS010000121.1	Genbank	pseudogene	63750	66162	.	-	.	ID=gene-J4731_25015;Name=gyrB;gbkey=Gene;gene=gyrB;gene_biotype=pseudogene;locus_tag=J4731_25015;pseudo=true
JAGETS010000121.1	Protein Homology	CDS	63750	66162	.	-	0	ID=cds-J4731_25015;Parent=gene-J4731_25015;Note=frameshifted;gbkey=CDS;gene=gyrB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121480.1;locus_tag=J4731_25015;product=DNA topoisomerase (ATP-hydrolyzing) subunit B;pseudo=true;transl_table=11
JAGETS010000121.1	Genbank	pseudogene	66181	67270	.	-	.	ID=gene-J4731_25020;Name=recF;gbkey=Gene;gene=recF;gene_biotype=pseudogene;locus_tag=J4731_25020;pseudo=true
JAGETS010000121.1	Protein Homology	CDS	66181	67270	.	-	0	ID=cds-J4731_25020;Parent=gene-J4731_25020;Note=frameshifted;gbkey=CDS;gene=recF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004875688.1;locus_tag=J4731_25020;product=DNA replication/repair protein RecF;pseudo=true;transl_table=11
JAGETS010000121.1	Genbank	pseudogene	67280	68378	.	-	.	ID=gene-J4731_25025;Name=dnaN;gbkey=Gene;gene=dnaN;gene_biotype=pseudogene;locus_tag=J4731_25025;pseudo=true
JAGETS010000121.1	Protein Homology	CDS	67280	68378	.	-	0	ID=cds-J4731_25025;Parent=gene-J4731_25025;Note=frameshifted;gbkey=CDS;gene=dnaN;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006177590.1;locus_tag=J4731_25025;product=DNA polymerase III subunit beta;pseudo=true;transl_table=11
JAGETS010000121.1	Genbank	pseudogene	68384	69442	.	-	.	ID=gene-J4731_25030;Name=dnaA;gbkey=Gene;gene=dnaA;gene_biotype=pseudogene;locus_tag=J4731_25030;pseudo=true
JAGETS010000121.1	Protein Homology	CDS	68384	69442	.	-	0	ID=cds-J4731_25030;Parent=gene-J4731_25030;Note=frameshifted;gbkey=CDS;gene=dnaA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007754196.1;locus_tag=J4731_25030;product=chromosomal replication initiator protein DnaA;pseudo=true;transl_table=11
JAGETS010000121.1	Genbank	gene	69574	69807	.	-	.	ID=gene-J4731_25035;Name=J4731_25035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_25035
JAGETS010000121.1	Protein Homology	CDS	69574	69807	.	-	0	ID=cds-MBO1929995.1;Parent=gene-J4731_25035;Dbxref=NCBI_GP:MBO1929995.1;Name=MBO1929995.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF023069.1;locus_tag=J4731_25035;product=hypothetical protein;protein_id=MBO1929995.1;transl_table=11
JAGETS010000121.1	Genbank	gene	70538	70681	.	+	.	ID=gene-J4731_25040;Name=rpmH;gbkey=Gene;gene=rpmH;gene_biotype=protein_coding;locus_tag=J4731_25040
JAGETS010000121.1	Protein Homology	CDS	70538	70681	.	+	0	ID=cds-MBO1929996.1;Parent=gene-J4731_25040;Dbxref=NCBI_GP:MBO1929996.1;Name=MBO1929996.1;gbkey=CDS;gene=rpmH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246509.1;locus_tag=J4731_25040;product=50S ribosomal protein L34;protein_id=MBO1929996.1;transl_table=11
JAGETS010000121.1	Genbank	pseudogene	70681	71058	.	+	.	ID=gene-J4731_25045;Name=rnpA;gbkey=Gene;gene=rnpA;gene_biotype=pseudogene;locus_tag=J4731_25045;pseudo=true
JAGETS010000121.1	Protein Homology	CDS	70681	71058	.	+	0	ID=cds-J4731_25045;Parent=gene-J4731_25045;Note=frameshifted;gbkey=CDS;gene=rnpA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246510.1;locus_tag=J4731_25045;product=ribonuclease P protein component;pseudo=true;transl_table=11
JAGETS010000121.1	Genbank	pseudogene	71022	71280	.	+	.	ID=gene-J4731_25050;Name=yidD;gbkey=Gene;gene=yidD;gene_biotype=pseudogene;locus_tag=J4731_25050;pseudo=true
JAGETS010000121.1	Protein Homology	CDS	71022	71280	.	+	0	ID=cds-J4731_25050;Parent=gene-J4731_25050;Note=frameshifted;gbkey=CDS;gene=yidD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014657163.1;locus_tag=J4731_25050;product=membrane protein insertion efficiency factor YidD;pseudo=true;transl_table=11
JAGETS010000121.1	Genbank	pseudogene	71283	72944	.	+	.	ID=gene-J4731_25055;Name=yidC;gbkey=Gene;gene=yidC;gene_biotype=pseudogene;locus_tag=J4731_25055;pseudo=true
JAGETS010000121.1	Protein Homology	CDS	71283	72944	.	+	0	ID=cds-J4731_25055;Parent=gene-J4731_25055;Note=frameshifted;gbkey=CDS;gene=yidC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000378259.1;locus_tag=J4731_25055;product=membrane protein insertase YidC;pseudo=true;transl_table=11
JAGETS010000121.1	Genbank	pseudogene	73027	74368	.	+	.	ID=gene-J4731_25060;Name=mnmE;gbkey=Gene;gene=mnmE;gene_biotype=pseudogene;locus_tag=J4731_25060;pseudo=true
JAGETS010000121.1	Protein Homology	CDS	73027	74368	.	+	0	ID=cds-J4731_25060;Parent=gene-J4731_25060;Note=frameshifted%3B internal stop;gbkey=CDS;gene=mnmE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015848543.1;locus_tag=J4731_25060;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE;pseudo=true;transl_table=11
JAGETS010000121.1	Genbank	pseudogene	74947	76231	.	+	.	ID=gene-J4731_25065;Name=J4731_25065;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_25065;pseudo=true
JAGETS010000121.1	Protein Homology	CDS	74947	76231	.	+	0	ID=cds-J4731_25065;Parent=gene-J4731_25065;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004249772.1;locus_tag=J4731_25065;product=HipA domain-containing protein;pseudo=true;transl_table=11
JAGETS010000121.1	Genbank	pseudogene	76249	77073	.	-	.	ID=gene-J4731_25070;Name=fdhD;gbkey=Gene;gene=fdhD;gene_biotype=pseudogene;locus_tag=J4731_25070;pseudo=true
JAGETS010000121.1	Protein Homology	CDS	76249	77073	.	-	0	ID=cds-J4731_25070;Parent=gene-J4731_25070;Note=frameshifted;gbkey=CDS;gene=fdhD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008913656.1;locus_tag=J4731_25070;product=formate dehydrogenase accessory sulfurtransferase FdhD;pseudo=true;transl_table=11
JAGETS010000121.1	Genbank	pseudogene	77246	80254	.	+	.	ID=gene-J4731_25075;Name=fdnG;gbkey=Gene;gene=fdnG;gene_biotype=pseudogene;locus_tag=J4731_25075;pseudo=true
JAGETS010000121.1	Protein Homology	CDS	77246	80254	.	+	0	ID=cds-J4731_25075;Parent=gene-J4731_25075;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;gene=fdnG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460529.1;locus_tag=J4731_25075;product=formate dehydrogenase-N subunit alpha;pseudo=true;transl_table=11
JAGETS010000121.1	Genbank	pseudogene	80271	81128	.	+	.	ID=gene-J4731_25080;Name=fdxH;gbkey=Gene;gene=fdxH;gene_biotype=pseudogene;locus_tag=J4731_25080;pseudo=true
JAGETS010000121.1	Protein Homology	CDS	80271	81128	.	+	0	ID=cds-J4731_25080;Parent=gene-J4731_25080;Note=frameshifted;gbkey=CDS;gene=fdxH;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224339.1;locus_tag=J4731_25080;product=formate dehydrogenase subunit beta;pseudo=true;transl_table=11
JAGETS010000121.1	Genbank	pseudogene	81203	81856	.	+	.	ID=gene-J4731_25085;Name=fdoI;gbkey=Gene;gene=fdoI;gene_biotype=pseudogene;locus_tag=J4731_25085;pseudo=true
JAGETS010000121.1	Protein Homology	CDS	81203	81856	.	+	0	ID=cds-J4731_25085;Parent=gene-J4731_25085;Note=frameshifted;gbkey=CDS;gene=fdoI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004906215.1;locus_tag=J4731_25085;product=formate dehydrogenase cytochrome b556 subunit;pseudo=true;transl_table=11
JAGETS010000121.1	Genbank	gene	82501	83691	.	+	.	ID=gene-J4731_25090;Name=frc;gbkey=Gene;gene=frc;gene_biotype=protein_coding;locus_tag=J4731_25090
JAGETS010000121.1	Protein Homology	CDS	82501	83691	.	+	0	ID=cds-MBO1929997.1;Parent=gene-J4731_25090;Dbxref=NCBI_GP:MBO1929997.1;Name=MBO1929997.1;gbkey=CDS;gene=frc;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006815731.1;locus_tag=J4731_25090;product=formyl-CoA transferase;protein_id=MBO1929997.1;transl_table=11
JAGETS010000121.1	Genbank	pseudogene	83812	85486	.	+	.	ID=gene-J4731_25095;Name=oxc;gbkey=Gene;gene=oxc;gene_biotype=pseudogene;locus_tag=J4731_25095;pseudo=true
JAGETS010000121.1	Protein Homology	CDS	83812	85486	.	+	0	ID=cds-J4731_25095;Parent=gene-J4731_25095;Note=frameshifted;gbkey=CDS;gene=oxc;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004924149.1;locus_tag=J4731_25095;product=oxalyl-CoA decarboxylase;pseudo=true;transl_table=11
JAGETS010000121.1	Genbank	pseudogene	85611	86545	.	+	.	ID=gene-J4731_25100;Name=yfdV;gbkey=Gene;gene=yfdV;gene_biotype=pseudogene;locus_tag=J4731_25100;pseudo=true
JAGETS010000121.1	Protein Homology	CDS	85611	86545	.	+	0	ID=cds-J4731_25100;Parent=gene-J4731_25100;Note=frameshifted;gbkey=CDS;gene=yfdV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311279.1;locus_tag=J4731_25100;product=transporter YfdV;pseudo=true;transl_table=11
JAGETS010000121.1	Genbank	pseudogene	86620	87857	.	+	.	ID=gene-J4731_25105;Name=frc;gbkey=Gene;gene=frc;gene_biotype=pseudogene;locus_tag=J4731_25105;pseudo=true
JAGETS010000121.1	Protein Homology	CDS	86620	87857	.	+	0	ID=cds-J4731_25105;Parent=gene-J4731_25105;Note=frameshifted;gbkey=CDS;gene=frc;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004906207.1;locus_tag=J4731_25105;product=formyl-CoA transferase;pseudo=true;transl_table=11
JAGETS010000121.1	Genbank	pseudogene	88101	89770	.	+	.	ID=gene-J4731_25110;Name=J4731_25110;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_25110;pseudo=true
JAGETS010000121.1	Protein Homology	CDS	88101	89770	.	+	0	ID=cds-J4731_25110;Parent=gene-J4731_25110;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014657172.1;locus_tag=J4731_25110;product=carbon-nitrogen hydrolase;pseudo=true;transl_table=11
JAGETS010000121.1	Genbank	pseudogene	89831	91314	.	-	.	ID=gene-J4731_25115;Name=J4731_25115;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_25115;pseudo=true
JAGETS010000121.1	Protein Homology	CDS	89831	91314	.	-	0	ID=cds-J4731_25115;Parent=gene-J4731_25115;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004906203.1;locus_tag=J4731_25115;product=fructuronate reductase;pseudo=true;transl_table=11
JAGETS010000121.1	Genbank	pseudogene	91318	92696	.	-	.	ID=gene-J4731_25120;Name=J4731_25120;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_25120;pseudo=true
JAGETS010000121.1	Protein Homology	CDS	91318	92696	.	-	0	ID=cds-J4731_25120;Parent=gene-J4731_25120;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016536589.1;locus_tag=J4731_25120;product=MHS family MFS transporter;pseudo=true;transl_table=11
JAGETS010000121.1	Genbank	pseudogene	92758	93777	.	-	.	ID=gene-J4731_25125;Name=J4731_25125;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_25125;pseudo=true
JAGETS010000121.1	Protein Homology	CDS	92758	93777	.	-	0	ID=cds-J4731_25125;Parent=gene-J4731_25125;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004906199.1;locus_tag=J4731_25125;product=Zn-dependent oxidoreductase;pseudo=true;transl_table=11
JAGETS010000121.1	Genbank	pseudogene	93801	95008	.	-	.	ID=gene-J4731_25130;Name=J4731_25130;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_25130;pseudo=true
JAGETS010000121.1	Protein Homology	CDS	93801	95008	.	-	0	ID=cds-J4731_25130;Parent=gene-J4731_25130;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001625315.1;locus_tag=J4731_25130;product=D-galactonate dehydratase family protein;pseudo=true;transl_table=11
JAGETS010000121.1	Genbank	pseudogene	95288	96026	.	+	.	ID=gene-J4731_25135;Name=J4731_25135;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_25135;pseudo=true
JAGETS010000121.1	Protein Homology	CDS	95288	96026	.	+	0	ID=cds-J4731_25135;Parent=gene-J4731_25135;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004906196.1;locus_tag=J4731_25135;product=FCD domain-containing protein;pseudo=true;transl_table=11
JAGETS010000121.1	Genbank	pseudogene	96044	97236	.	+	.	ID=gene-J4731_25140;Name=uxuA;gbkey=Gene;gene=uxuA;gene_biotype=pseudogene;locus_tag=J4731_25140;pseudo=true
JAGETS010000121.1	Protein Homology	CDS	96044	97236	.	+	0	ID=cds-J4731_25140;Parent=gene-J4731_25140;Note=frameshifted;gbkey=CDS;gene=uxuA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004906194.1;locus_tag=J4731_25140;product=mannonate dehydratase;pseudo=true;transl_table=11
JAGETS010000121.1	Genbank	gene	97358	97654	.	-	.	ID=gene-J4731_25145;Name=J4731_25145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_25145
JAGETS010000121.1	GeneMarkS-2+	CDS	97358	97654	.	-	0	ID=cds-MBO1929998.1;Parent=gene-J4731_25145;Dbxref=NCBI_GP:MBO1929998.1;Name=MBO1929998.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_25145;product=hypothetical protein;protein_id=MBO1929998.1;transl_table=11
JAGETS010000121.1	Genbank	gene	97805	98368	.	-	.	ID=gene-J4731_25150;Name=J4731_25150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_25150
JAGETS010000121.1	GeneMarkS-2+	CDS	97805	98368	.	-	0	ID=cds-MBO1929999.1;Parent=gene-J4731_25150;Dbxref=NCBI_GP:MBO1929999.1;Name=MBO1929999.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_25150;product=hypothetical protein;protein_id=MBO1929999.1;transl_table=11
JAGETS010000121.1	Genbank	gene	98371	98556	.	-	.	ID=gene-J4731_25155;Name=J4731_25155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_25155
JAGETS010000121.1	GeneMarkS-2+	CDS	98371	98556	.	-	0	ID=cds-MBO1930000.1;Parent=gene-J4731_25155;Dbxref=NCBI_GP:MBO1930000.1;Name=MBO1930000.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_25155;product=hypothetical protein;protein_id=MBO1930000.1;transl_table=11
JAGETS010000121.1	Genbank	gene	98547	98747	.	-	.	ID=gene-J4731_25160;Name=J4731_25160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_25160
JAGETS010000121.1	GeneMarkS-2+	CDS	98547	98747	.	-	0	ID=cds-MBO1930001.1;Parent=gene-J4731_25160;Dbxref=NCBI_GP:MBO1930001.1;Name=MBO1930001.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_25160;product=hypothetical protein;protein_id=MBO1930001.1;transl_table=11
JAGETS010000121.1	Genbank	gene	98785	98952	.	-	.	ID=gene-J4731_25165;Name=J4731_25165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_25165
JAGETS010000121.1	GeneMarkS-2+	CDS	98785	98952	.	-	0	ID=cds-MBO1930002.1;Parent=gene-J4731_25165;Dbxref=NCBI_GP:MBO1930002.1;Name=MBO1930002.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_25165;product=hypothetical protein;protein_id=MBO1930002.1;transl_table=11
JAGETS010000121.1	Genbank	gene	99821	99970	.	-	.	ID=gene-J4731_25170;Name=J4731_25170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_25170
JAGETS010000121.1	Protein Homology	CDS	99821	99970	.	-	0	ID=cds-MBO1930003.1;Parent=gene-J4731_25170;Dbxref=NCBI_GP:MBO1930003.1;Name=MBO1930003.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012354.1;locus_tag=J4731_25170;product=LysR family transcriptional regulator;protein_id=MBO1930003.1;transl_table=11
JAGETS010000121.1	Genbank	pseudogene	100699	101633	.	+	.	ID=gene-J4731_25175;Name=fdhE;gbkey=Gene;gene=fdhE;gene_biotype=pseudogene;locus_tag=J4731_25175;pseudo=true
JAGETS010000121.1	Protein Homology	CDS	100699	101633	.	+	0	ID=cds-J4731_25175;Parent=gene-J4731_25175;Note=frameshifted;gbkey=CDS;gene=fdhE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014657174.1;locus_tag=J4731_25175;product=formate dehydrogenase accessory protein FdhE;pseudo=true;transl_table=11
JAGETS010000121.1	Genbank	pseudogene	101655	103041	.	+	.	ID=gene-J4731_25180;Name=J4731_25180;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_25180;pseudo=true
JAGETS010000121.1	Protein Homology	CDS	101655	103041	.	+	0	ID=cds-J4731_25180;Parent=gene-J4731_25180;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015344040.1;locus_tag=J4731_25180;product=L-seryl-tRNA(Sec) selenium transferase;pseudo=true;transl_table=11
JAGETS010000121.1	Genbank	pseudogene	103038	104889	.	+	.	ID=gene-J4731_25185;Name=selB;gbkey=Gene;gene=selB;gene_biotype=pseudogene;locus_tag=J4731_25185;pseudo=true
JAGETS010000121.1	Protein Homology	CDS	103038	104889	.	+	0	ID=cds-J4731_25185;Parent=gene-J4731_25185;Note=frameshifted%3B internal stop;gbkey=CDS;gene=selB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120494.1;locus_tag=J4731_25185;product=selenocysteine-specific translation elongation factor;pseudo=true;transl_table=11
JAGETS010000121.1	Genbank	pseudogene	104988	106606	.	+	.	ID=gene-J4731_25190;Name=J4731_25190;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_25190;pseudo=true
JAGETS010000121.1	Protein Homology	CDS	104988	106606	.	+	0	ID=cds-J4731_25190;Parent=gene-J4731_25190;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004249790.1;locus_tag=J4731_25190;product=sulfatase-like hydrolase/transferase;pseudo=true;transl_table=11
JAGETS010000121.1	Genbank	pseudogene	106827	107824	.	+	.	ID=gene-J4731_25195;Name=J4731_25195;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_25195;pseudo=true
JAGETS010000121.1	Protein Homology	CDS	106827	107824	.	+	0	ID=cds-J4731_25195;Parent=gene-J4731_25195;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012368012.1;locus_tag=J4731_25195;product=NAD-dependent epimerase;pseudo=true;transl_table=11
JAGETS010000121.1	Genbank	pseudogene	107869	109030	.	+	.	ID=gene-J4731_25200;Name=J4731_25200;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_25200;pseudo=true
JAGETS010000121.1	Protein Homology	CDS	107869	109030	.	+	0	ID=cds-J4731_25200;Parent=gene-J4731_25200;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002992300.1;locus_tag=J4731_25200;product=nucleotide sugar dehydrogenase;pseudo=true;transl_table=11
JAGETS010000121.1	Genbank	pseudogene	109220	110016	.	+	.	ID=gene-J4731_25205;Name=J4731_25205;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_25205;pseudo=true
JAGETS010000121.1	Protein Homology	CDS	109220	110016	.	+	0	ID=cds-J4731_25205;Parent=gene-J4731_25205;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004924196.1;locus_tag=J4731_25205;product=lipopolysaccharide core biosynthesis protein;pseudo=true;transl_table=11
JAGETS010000121.1	Genbank	pseudogene	109982	110744	.	-	.	ID=gene-J4731_25210;Name=thiM;gbkey=Gene;gene=thiM;gene_biotype=pseudogene;locus_tag=J4731_25210;pseudo=true
JAGETS010000121.1	Protein Homology	CDS	109982	110744	.	-	0	ID=cds-J4731_25210;Parent=gene-J4731_25210;Note=frameshifted;gbkey=CDS;gene=thiM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004906177.1;locus_tag=J4731_25210;product=hydroxyethylthiazole kinase;pseudo=true;transl_table=11
JAGETS010000121.1	Genbank	pseudogene	110822	111890	.	-	.	ID=gene-J4731_25215;Name=J4731_25215;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_25215;pseudo=true
JAGETS010000121.1	Protein Homology	CDS	110822	111890	.	-	0	ID=cds-J4731_25215;Parent=gene-J4731_25215;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004906176.1;locus_tag=J4731_25215;product=ROK family protein;pseudo=true;transl_table=11
JAGETS010000121.1	Genbank	gene	112175	113023	.	+	.	ID=gene-J4731_25220;Name=J4731_25220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_25220
JAGETS010000121.1	Protein Homology	CDS	112175	113023	.	+	0	ID=cds-MBO1930004.1;Parent=gene-J4731_25220;Dbxref=NCBI_GP:MBO1930004.1;Name=MBO1930004.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006660593.1;locus_tag=J4731_25220;product=purine-nucleoside phosphorylase;protein_id=MBO1930004.1;transl_table=11
JAGETS010000121.1	Genbank	pseudogene	113090	114005	.	+	.	ID=gene-J4731_25225;Name=J4731_25225;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_25225;pseudo=true
JAGETS010000121.1	Protein Homology	CDS	113090	114005	.	+	0	ID=cds-J4731_25225;Parent=gene-J4731_25225;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008913627.1;locus_tag=J4731_25225;product=DMT family transporter;pseudo=true;transl_table=11
JAGETS010000121.1	Genbank	pseudogene	113995	115244	.	+	.	ID=gene-J4731_25230;Name=J4731_25230;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_25230;pseudo=true
JAGETS010000121.1	Protein Homology	CDS	113995	115244	.	+	0	ID=cds-J4731_25230;Parent=gene-J4731_25230;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006660592.1;locus_tag=J4731_25230;product=MFS transporter;pseudo=true;transl_table=11
JAGETS010000121.1	Genbank	pseudogene	115317	115939	.	-	.	ID=gene-J4731_25235;Name=J4731_25235;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_25235;pseudo=true
JAGETS010000121.1	Protein Homology	CDS	115317	115939	.	-	0	ID=cds-J4731_25235;Parent=gene-J4731_25235;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004906170.1;locus_tag=J4731_25235;product=GntR family transcriptional regulator;pseudo=true;transl_table=11
JAGETS010000121.1	Genbank	pseudogene	116099	116882	.	-	.	ID=gene-J4731_25240;Name=J4731_25240;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_25240;pseudo=true
JAGETS010000121.1	Protein Homology	CDS	116099	116882	.	-	0	ID=cds-J4731_25240;Parent=gene-J4731_25240;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004906169.1;locus_tag=J4731_25240;product=carbon-nitrogen hydrolase family protein;pseudo=true;transl_table=11
JAGETS010000121.1	Genbank	pseudogene	116879	117535	.	-	.	ID=gene-J4731_25245;Name=J4731_25245;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_25245;pseudo=true
JAGETS010000121.1	Protein Homology	CDS	116879	117535	.	-	0	ID=cds-J4731_25245;Parent=gene-J4731_25245;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002445562.1;locus_tag=J4731_25245;product=RraA family protein;pseudo=true;transl_table=11
JAGETS010000121.1	Genbank	pseudogene	117584	118889	.	-	.	ID=gene-J4731_25250;Name=J4731_25250;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_25250;pseudo=true
JAGETS010000121.1	Protein Homology	CDS	117584	118889	.	-	0	ID=cds-J4731_25250;Parent=gene-J4731_25250;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004906166.1;locus_tag=J4731_25250;product=MFS transporter;pseudo=true;transl_table=11
JAGETS010000121.1	Genbank	pseudogene	119382	120241	.	-	.	ID=gene-J4731_25255;Name=J4731_25255;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_25255;pseudo=true
JAGETS010000121.1	Protein Homology	CDS	119382	120241	.	-	0	ID=cds-J4731_25255;Parent=gene-J4731_25255;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122606.1;locus_tag=J4731_25255;product=YicC family protein;pseudo=true;transl_table=11
JAGETS010000121.1	Genbank	pseudogene	120365	121077	.	+	.	ID=gene-J4731_25260;Name=rph;gbkey=Gene;gene=rph;gene_biotype=pseudogene;locus_tag=J4731_25260;pseudo=true
JAGETS010000121.1	Protein Homology	CDS	120365	121077	.	+	0	ID=cds-J4731_25260;Parent=gene-J4731_25260;Note=frameshifted;gbkey=CDS;gene=rph;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462634.1;locus_tag=J4731_25260;product=ribonuclease PH;pseudo=true;transl_table=11
JAGETS010000121.1	Genbank	pseudogene	121189	121831	.	+	.	ID=gene-J4731_25265;Name=pyrE;gbkey=Gene;gene=pyrE;gene_biotype=pseudogene;locus_tag=J4731_25265;pseudo=true
JAGETS010000121.1	Protein Homology	CDS	121189	121831	.	+	0	ID=cds-J4731_25265;Parent=gene-J4731_25265;Note=frameshifted;gbkey=CDS;gene=pyrE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004240140.1;locus_tag=J4731_25265;product=orotate phosphoribosyltransferase;pseudo=true;transl_table=11
JAGETS010000121.1	Genbank	pseudogene	121877	122473	.	-	.	ID=gene-J4731_25270;Name=slmA;gbkey=Gene;gene=slmA;gene_biotype=pseudogene;locus_tag=J4731_25270;pseudo=true
JAGETS010000121.1	Protein Homology	CDS	121877	122473	.	-	0	ID=cds-J4731_25270;Parent=gene-J4731_25270;Note=frameshifted;gbkey=CDS;gene=slmA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000818604.1;locus_tag=J4731_25270;product=nucleoid occlusion factor SlmA;pseudo=true;transl_table=11
JAGETS010000121.1	Genbank	pseudogene	122690	123122	.	-	.	ID=gene-J4731_25275;Name=dut;gbkey=Gene;gene=dut;gene_biotype=pseudogene;locus_tag=J4731_25275;pseudo=true
JAGETS010000121.1	Protein Homology	CDS	122690	123122	.	-	0	ID=cds-J4731_25275;Parent=gene-J4731_25275;Note=frameshifted;gbkey=CDS;gene=dut;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000976070.1;locus_tag=J4731_25275;product=dUTP diphosphatase;pseudo=true;transl_table=11
JAGETS010000121.1	Genbank	pseudogene	123134	124331	.	-	.	ID=gene-J4731_25280;Name=coaBC;gbkey=Gene;gene=coaBC;gene_biotype=pseudogene;locus_tag=J4731_25280;pseudo=true
JAGETS010000121.1	Protein Homology	CDS	123134	124331	.	-	0	ID=cds-J4731_25280;Parent=gene-J4731_25280;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;gene=coaBC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004265117.1;locus_tag=J4731_25280;product=bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC;pseudo=true;transl_table=11
JAGETS010000121.1	Genbank	pseudogene	124513	125041	.	+	.	ID=gene-J4731_25285;Name=radC;gbkey=Gene;gene=radC;gene_biotype=pseudogene;locus_tag=J4731_25285;pseudo=true
JAGETS010000121.1	Protein Homology	CDS	124513	125041	.	+	0	ID=cds-J4731_25285;Parent=gene-J4731_25285;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;gene=radC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014657194.1;locus_tag=J4731_25285;product=DNA repair protein RadC;pseudo=true;transl_table=11
JAGETS010000121.1	Genbank	pseudogene	125176	126103	.	+	.	ID=gene-J4731_25290;Name=J4731_25290;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_25290;pseudo=true
JAGETS010000121.1	Protein Homology	CDS	125176	126103	.	+	0	ID=cds-J4731_25290;Parent=gene-J4731_25290;Note=frameshifted%3B internal stop%3B incomplete%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003734338.1;locus_tag=J4731_25290;product=tyrosine-type recombinase/integrase;pseudo=true;transl_table=11
##sequence-region JAGETS010000122.1 1 9639
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=587
JAGETS010000122.1	Genbank	region	1	9639	.	+	.	ID=JAGETS010000122.1:1..9639;Dbxref=taxon:587;collected-by=NHLS;collection-date=2018;country=South Africa: Pretoria;gbkey=Src;isolation-source=stool;lat-lon=25.7479 S 28.2293 E;mol_type=genomic DNA;nat-host=porcine;strain=SG003
JAGETS010000122.1	Genbank	pseudogene	1	852	.	-	.	ID=gene-J4731_25295;Name=J4731_25295;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_25295;pseudo=true
JAGETS010000122.1	Protein Homology	CDS	1	852	.	-	0	ID=cds-J4731_25295;Parent=gene-J4731_25295;Note=frameshifted%3B incomplete%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122606.1;locus_tag=J4731_25295;product=YicC family protein;pseudo=true;transl_table=11
JAGETS010000122.1	Genbank	pseudogene	976	1694	.	+	.	ID=gene-J4731_25300;Name=rph;gbkey=Gene;gene=rph;gene_biotype=pseudogene;locus_tag=J4731_25300;pseudo=true
JAGETS010000122.1	Protein Homology	CDS	976	1694	.	+	0	ID=cds-J4731_25300;Parent=gene-J4731_25300;Note=frameshifted%3B internal stop;gbkey=CDS;gene=rph;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013577632.1;locus_tag=J4731_25300;product=ribonuclease PH;pseudo=true;transl_table=11
JAGETS010000122.1	Genbank	pseudogene	1783	2425	.	+	.	ID=gene-J4731_25305;Name=pyrE;gbkey=Gene;gene=pyrE;gene_biotype=pseudogene;locus_tag=J4731_25305;pseudo=true
JAGETS010000122.1	Protein Homology	CDS	1783	2425	.	+	0	ID=cds-J4731_25305;Parent=gene-J4731_25305;Note=frameshifted;gbkey=CDS;gene=pyrE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004240140.1;locus_tag=J4731_25305;product=orotate phosphoribosyltransferase;pseudo=true;transl_table=11
JAGETS010000122.1	Genbank	pseudogene	2468	3015	.	-	.	ID=gene-J4731_25310;Name=slmA;gbkey=Gene;gene=slmA;gene_biotype=pseudogene;locus_tag=J4731_25310;pseudo=true
JAGETS010000122.1	Protein Homology	CDS	2468	3015	.	-	0	ID=cds-J4731_25310;Parent=gene-J4731_25310;Note=frameshifted%3B internal stop;gbkey=CDS;gene=slmA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015848259.1;locus_tag=J4731_25310;product=nucleoid occlusion factor SlmA;pseudo=true;transl_table=11
JAGETS010000122.1	Genbank	pseudogene	3271	3707	.	-	.	ID=gene-J4731_25315;Name=dut;gbkey=Gene;gene=dut;gene_biotype=pseudogene;locus_tag=J4731_25315;pseudo=true
JAGETS010000122.1	Protein Homology	CDS	3271	3707	.	-	0	ID=cds-J4731_25315;Parent=gene-J4731_25315;Note=frameshifted;gbkey=CDS;gene=dut;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008913614.1;locus_tag=J4731_25315;product=dUTP diphosphatase;pseudo=true;transl_table=11
JAGETS010000122.1	Genbank	pseudogene	3700	4910	.	-	.	ID=gene-J4731_25320;Name=coaBC;gbkey=Gene;gene=coaBC;gene_biotype=pseudogene;locus_tag=J4731_25320;pseudo=true
JAGETS010000122.1	Protein Homology	CDS	3700	4910	.	-	0	ID=cds-J4731_25320;Parent=gene-J4731_25320;Note=frameshifted;gbkey=CDS;gene=coaBC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008913613.1;locus_tag=J4731_25320;product=bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC;pseudo=true;transl_table=11
JAGETS010000122.1	Genbank	pseudogene	5091	5626	.	+	.	ID=gene-J4731_25325;Name=radC;gbkey=Gene;gene=radC;gene_biotype=pseudogene;locus_tag=J4731_25325;pseudo=true
JAGETS010000122.1	Protein Homology	CDS	5091	5626	.	+	0	ID=cds-J4731_25325;Parent=gene-J4731_25325;Note=frameshifted;gbkey=CDS;gene=radC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006660584.1;locus_tag=J4731_25325;product=DNA repair protein RadC;pseudo=true;transl_table=11
JAGETS010000122.1	Genbank	pseudogene	5750	6833	.	+	.	ID=gene-J4731_25330;Name=J4731_25330;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_25330;pseudo=true
JAGETS010000122.1	Protein Homology	CDS	5750	6833	.	+	0	ID=cds-J4731_25330;Parent=gene-J4731_25330;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003734338.1;locus_tag=J4731_25330;product=tyrosine-type recombinase/integrase;pseudo=true;transl_table=11
JAGETS010000122.1	Genbank	pseudogene	6826	8707	.	+	.	ID=gene-J4731_25335;Name=J4731_25335;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_25335;pseudo=true
JAGETS010000122.1	Protein Homology	CDS	6826	8707	.	+	0	ID=cds-J4731_25335;Parent=gene-J4731_25335;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003734337.1;locus_tag=J4731_25335;product=tyrosine-type recombinase/integrase;pseudo=true;transl_table=11
JAGETS010000122.1	Genbank	pseudogene	9401	9639	.	+	.	ID=gene-J4731_25340;Name=J4731_25340;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_25340;pseudo=true
JAGETS010000122.1	Protein Homology	CDS	9401	9639	.	+	0	ID=cds-J4731_25340;Parent=gene-J4731_25340;Note=frameshifted%3B incomplete%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002333496.1;locus_tag=J4731_25340;product=aminoglycoside 6-adenylyltransferase;pseudo=true;transl_table=11
##sequence-region JAGETS010000123.1 1 2380
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=587
JAGETS010000123.1	Genbank	region	1	2380	.	+	.	ID=JAGETS010000123.1:1..2380;Dbxref=taxon:587;collected-by=NHLS;collection-date=2018;country=South Africa: Pretoria;gbkey=Src;isolation-source=stool;lat-lon=25.7479 S 28.2293 E;mol_type=genomic DNA;nat-host=porcine;strain=SG003
JAGETS010000123.1	Genbank	pseudogene	279	804	.	+	.	ID=gene-J4731_25345;Name=radC;gbkey=Gene;gene=radC;gene_biotype=pseudogene;locus_tag=J4731_25345;pseudo=true
JAGETS010000123.1	Protein Homology	CDS	279	804	.	+	0	ID=cds-J4731_25345;Parent=gene-J4731_25345;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;gene=radC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014657194.1;locus_tag=J4731_25345;product=DNA repair protein RadC;pseudo=true;transl_table=11
JAGETS010000123.1	Genbank	pseudogene	939	2021	.	+	.	ID=gene-J4731_25350;Name=J4731_25350;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_25350;pseudo=true
JAGETS010000123.1	Protein Homology	CDS	939	2021	.	+	0	ID=cds-J4731_25350;Parent=gene-J4731_25350;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003734338.1;locus_tag=J4731_25350;product=tyrosine-type recombinase/integrase;pseudo=true;transl_table=11
JAGETS010000123.1	Genbank	gene	2018	2335	.	+	.	ID=gene-J4731_25355;Name=J4731_25355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_25355
JAGETS010000123.1	GeneMarkS-2+	CDS	2018	2335	.	+	0	ID=cds-MBO1930005.1;Parent=gene-J4731_25355;Dbxref=NCBI_GP:MBO1930005.1;Name=MBO1930005.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_25355;product=hypothetical protein;protein_id=MBO1930005.1;transl_table=11
##sequence-region JAGETS010000124.1 1 3384
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=587
JAGETS010000124.1	Genbank	region	1	3384	.	+	.	ID=JAGETS010000124.1:1..3384;Dbxref=taxon:587;collected-by=NHLS;collection-date=2018;country=South Africa: Pretoria;gbkey=Src;isolation-source=stool;lat-lon=25.7479 S 28.2293 E;mol_type=genomic DNA;nat-host=porcine;strain=SG003
JAGETS010000124.1	Genbank	pseudogene	1	307	.	+	.	ID=gene-J4731_25360;Name=J4731_25360;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_25360;pseudo=true
JAGETS010000124.1	Protein Homology	CDS	1	307	.	+	1	ID=cds-J4731_25360;Parent=gene-J4731_25360;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004265120.1;locus_tag=J4731_25360;product=hypothetical protein;pseudo=true;transl_table=11
JAGETS010000124.1	Genbank	pseudogene	443	1519	.	+	.	ID=gene-J4731_25365;Name=J4731_25365;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_25365;pseudo=true
JAGETS010000124.1	Protein Homology	CDS	443	1519	.	+	0	ID=cds-J4731_25365;Parent=gene-J4731_25365;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003734338.1;locus_tag=J4731_25365;product=tyrosine-type recombinase/integrase;pseudo=true;transl_table=11
JAGETS010000124.1	Genbank	pseudogene	1520	3384	.	+	.	ID=gene-J4731_25370;Name=J4731_25370;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_25370;pseudo=true
JAGETS010000124.1	Protein Homology	CDS	1520	3384	.	+	0	ID=cds-J4731_25370;Parent=gene-J4731_25370;Note=frameshifted%3B internal stop%3B incomplete%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003734337.1;locus_tag=J4731_25370;product=tyrosine-type recombinase/integrase;pseudo=true;transl_table=11
##sequence-region JAGETS010000125.1 1 11557
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=587
JAGETS010000125.1	Genbank	region	1	11557	.	+	.	ID=JAGETS010000125.1:1..11557;Dbxref=taxon:587;collected-by=NHLS;collection-date=2018;country=South Africa: Pretoria;gbkey=Src;isolation-source=stool;lat-lon=25.7479 S 28.2293 E;mol_type=genomic DNA;nat-host=porcine;strain=SG003
JAGETS010000125.1	Genbank	pseudogene	1	416	.	+	.	ID=gene-J4731_25375;Name=radC;gbkey=Gene;gene=radC;gene_biotype=pseudogene;locus_tag=J4731_25375;pseudo=true
JAGETS010000125.1	Protein Homology	CDS	1	416	.	+	2	ID=cds-J4731_25375;Parent=gene-J4731_25375;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;gbkey=CDS;gene=radC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004924233.1;locus_tag=J4731_25375;product=DNA repair protein RadC;pseudo=true;transl_table=11
JAGETS010000125.1	Genbank	pseudogene	562	1636	.	+	.	ID=gene-J4731_25380;Name=J4731_25380;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_25380;pseudo=true
JAGETS010000125.1	Protein Homology	CDS	562	1636	.	+	0	ID=cds-J4731_25380;Parent=gene-J4731_25380;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003734338.1;locus_tag=J4731_25380;product=tyrosine-type recombinase/integrase;pseudo=true;transl_table=11
JAGETS010000125.1	Genbank	pseudogene	1633	3502	.	+	.	ID=gene-J4731_25385;Name=J4731_25385;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_25385;pseudo=true
JAGETS010000125.1	Protein Homology	CDS	1633	3502	.	+	0	ID=cds-J4731_25385;Parent=gene-J4731_25385;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003734337.1;locus_tag=J4731_25385;product=tyrosine-type recombinase/integrase;pseudo=true;transl_table=11
JAGETS010000125.1	Genbank	pseudogene	3503	3826	.	+	.	ID=gene-J4731_25390;Name=J4731_25390;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_25390;pseudo=true
JAGETS010000125.1	Protein Homology	CDS	3503	3826	.	+	0	ID=cds-J4731_25390;Parent=gene-J4731_25390;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002333497.1;locus_tag=J4731_25390;product=transposase;pseudo=true;transl_table=11
JAGETS010000125.1	Genbank	pseudogene	4144	4924	.	+	.	ID=gene-J4731_25395;Name=J4731_25395;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_25395;pseudo=true
JAGETS010000125.1	Protein Homology	CDS	4144	4924	.	+	0	ID=cds-J4731_25395;Parent=gene-J4731_25395;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002333496.1;locus_tag=J4731_25395;product=lincosamide nucleotidyltransferase Lnu(B);pseudo=true;transl_table=11
JAGETS010000125.1	Genbank	pseudogene	5048	5178	.	+	.	ID=gene-J4731_25400;Name=J4731_25400;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_25400;pseudo=true
JAGETS010000125.1	Protein Homology	CDS	5048	5178	.	+	0	ID=cds-J4731_25400;Parent=gene-J4731_25400;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004924233.1;locus_tag=J4731_25400;product=hypothetical protein;pseudo=true;transl_table=11
JAGETS010000125.1	Genbank	pseudogene	5440	5669	.	+	.	ID=gene-J4731_25405;Name=rpmB;gbkey=Gene;gene=rpmB;gene_biotype=pseudogene;locus_tag=J4731_25405;pseudo=true
JAGETS010000125.1	Protein Homology	CDS	5440	5669	.	+	0	ID=cds-J4731_25405;Parent=gene-J4731_25405;Note=frameshifted;gbkey=CDS;gene=rpmB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008457442.1;locus_tag=J4731_25405;product=50S ribosomal protein L28;pseudo=true;transl_table=11
JAGETS010000125.1	Genbank	pseudogene	5754	5831	.	+	.	ID=gene-J4731_25410;Name=rpmG;gbkey=Gene;gene=rpmG;gene_biotype=pseudogene;locus_tag=J4731_25410;pseudo=true
JAGETS010000125.1	Protein Homology	CDS	5754	5831	.	+	0	ID=cds-J4731_25410;Parent=gene-J4731_25410;Note=internal stop;gbkey=CDS;gene=rpmG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012696028.1;locus_tag=J4731_25410;product=50S ribosomal protein L33;pseudo=true;transl_table=11
JAGETS010000125.1	Genbank	pseudogene	6055	7048	.	+	.	ID=gene-J4731_25415;Name=rfaQ;gbkey=Gene;gene=rfaQ;gene_biotype=pseudogene;locus_tag=J4731_25415;pseudo=true
JAGETS010000125.1	Protein Homology	CDS	6055	7048	.	+	0	ID=cds-J4731_25415;Parent=gene-J4731_25415;Note=frameshifted;gbkey=CDS;gene=rfaQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006660582.1;locus_tag=J4731_25415;product=lipopolysaccharide core heptosyltransferase RfaQ;pseudo=true;transl_table=11
JAGETS010000125.1	Genbank	pseudogene	7050	8139	.	+	.	ID=gene-J4731_25420;Name=J4731_25420;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_25420;pseudo=true
JAGETS010000125.1	Protein Homology	CDS	7050	8139	.	+	0	ID=cds-J4731_25420;Parent=gene-J4731_25420;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006816179.1;locus_tag=J4731_25420;product=glycosyltransferase family 4 protein;pseudo=true;transl_table=11
JAGETS010000125.1	Genbank	pseudogene	8132	8904	.	+	.	ID=gene-J4731_25425;Name=rfaP;gbkey=Gene;gene=rfaP;gene_biotype=pseudogene;locus_tag=J4731_25425;pseudo=true
JAGETS010000125.1	Protein Homology	CDS	8132	8904	.	+	0	ID=cds-J4731_25425;Parent=gene-J4731_25425;Note=frameshifted%3B internal stop;gbkey=CDS;gene=rfaP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000229847.1;locus_tag=J4731_25425;product=lipopolysaccharide core heptose(I) kinase RfaP;pseudo=true;transl_table=11
JAGETS010000125.1	Genbank	pseudogene	8929	9897	.	+	.	ID=gene-J4731_25430;Name=J4731_25430;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_25430;pseudo=true
JAGETS010000125.1	Protein Homology	CDS	8929	9897	.	+	0	ID=cds-J4731_25430;Parent=gene-J4731_25430;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004265131.1;locus_tag=J4731_25430;product=lipopolysaccharide 1%2C3-galactosyltransferase;pseudo=true;transl_table=11
JAGETS010000125.1	Genbank	pseudogene	10158	11052	.	+	.	ID=gene-J4731_25435;Name=J4731_25435;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_25435;pseudo=true
JAGETS010000125.1	Protein Homology	CDS	10158	11052	.	+	0	ID=cds-J4731_25435;Parent=gene-J4731_25435;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014657198.1;locus_tag=J4731_25435;product=O-antigen ligase RfaL;pseudo=true;transl_table=11
##sequence-region JAGETS010000126.1 1 64750
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=587
JAGETS010000126.1	Genbank	region	1	64750	.	+	.	ID=JAGETS010000126.1:1..64750;Dbxref=taxon:587;collected-by=NHLS;collection-date=2018;country=South Africa: Pretoria;gbkey=Src;isolation-source=stool;lat-lon=25.7479 S 28.2293 E;mol_type=genomic DNA;nat-host=porcine;strain=SG003
JAGETS010000126.1	Genbank	pseudogene	1	822	.	+	.	ID=gene-J4731_25440;Name=J4731_25440;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_25440;pseudo=true
JAGETS010000126.1	Protein Homology	CDS	1	822	.	+	0	ID=cds-J4731_25440;Parent=gene-J4731_25440;Note=frameshifted%3B internal stop%3B incomplete%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004265131.1;locus_tag=J4731_25440;product=lipopolysaccharide 1%2C3-galactosyltransferase;pseudo=true;transl_table=11
JAGETS010000126.1	Genbank	pseudogene	1079	1998	.	+	.	ID=gene-J4731_25445;Name=rfaL;gbkey=Gene;gene=rfaL;gene_biotype=pseudogene;locus_tag=J4731_25445;pseudo=true
JAGETS010000126.1	Protein Homology	CDS	1079	1998	.	+	0	ID=cds-J4731_25445;Parent=gene-J4731_25445;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;gene=rfaL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014657198.1;locus_tag=J4731_25445;product=O-antigen ligase RfaL;pseudo=true;transl_table=11
JAGETS010000126.1	Genbank	pseudogene	2047	3055	.	+	.	ID=gene-J4731_25450;Name=J4731_25450;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_25450;pseudo=true
JAGETS010000126.1	Protein Homology	CDS	2047	3055	.	+	0	ID=cds-J4731_25450;Parent=gene-J4731_25450;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004924259.1;locus_tag=J4731_25450;product=lipopolysaccharide 1%2C2-glucosyltransferase;pseudo=true;transl_table=11
JAGETS010000126.1	Genbank	pseudogene	3060	4194	.	+	.	ID=gene-J4731_25455;Name=J4731_25455;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_25455;pseudo=true
JAGETS010000126.1	Protein Homology	CDS	3060	4194	.	+	0	ID=cds-J4731_25455;Parent=gene-J4731_25455;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004924261.1;locus_tag=J4731_25455;product=glycosyltransferase;pseudo=true;transl_table=11
JAGETS010000126.1	Genbank	pseudogene	4216	5016	.	+	.	ID=gene-J4731_25460;Name=mutM;gbkey=Gene;gene=mutM;gene_biotype=pseudogene;locus_tag=J4731_25460;pseudo=true
JAGETS010000126.1	Protein Homology	CDS	4216	5016	.	+	0	ID=cds-J4731_25460;Parent=gene-J4731_25460;Note=frameshifted;gbkey=CDS;gene=mutM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004265140.1;locus_tag=J4731_25460;product=bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase;pseudo=true;transl_table=11
JAGETS010000126.1	Genbank	pseudogene	5026	5505	.	-	.	ID=gene-J4731_25465;Name=coaD;gbkey=Gene;gene=coaD;gene_biotype=pseudogene;locus_tag=J4731_25465;pseudo=true
JAGETS010000126.1	Protein Homology	CDS	5026	5505	.	-	0	ID=cds-J4731_25465;Parent=gene-J4731_25465;Note=frameshifted%3B internal stop;gbkey=CDS;gene=coaD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246474.1;locus_tag=J4731_25465;product=pantetheine-phosphate adenylyltransferase;pseudo=true;transl_table=11
JAGETS010000126.1	Genbank	pseudogene	5693	6965	.	+	.	ID=gene-J4731_25470;Name=waaA;gbkey=Gene;gene=waaA;gene_biotype=pseudogene;locus_tag=J4731_25470;pseudo=true
JAGETS010000126.1	Protein Homology	CDS	5693	6965	.	+	0	ID=cds-J4731_25470;Parent=gene-J4731_25470;Note=frameshifted;gbkey=CDS;gene=waaA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004265144.1;locus_tag=J4731_25470;product=lipid IV(A) 3-deoxy-D-manno-octulosonic acid transferase;pseudo=true;transl_table=11
JAGETS010000126.1	Genbank	pseudogene	7163	8616	.	+	.	ID=gene-J4731_25475;Name=J4731_25475;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_25475;pseudo=true
JAGETS010000126.1	Protein Homology	CDS	7163	8616	.	+	0	ID=cds-J4731_25475;Parent=gene-J4731_25475;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004265145.1;locus_tag=J4731_25475;product=glycosyltransferase family 39 protein;pseudo=true;transl_table=11
JAGETS010000126.1	Genbank	pseudogene	8671	9630	.	-	.	ID=gene-J4731_25480;Name=rfaC;gbkey=Gene;gene=rfaC;gene_biotype=pseudogene;locus_tag=J4731_25480;pseudo=true
JAGETS010000126.1	Protein Homology	CDS	8671	9630	.	-	0	ID=cds-J4731_25480;Parent=gene-J4731_25480;Note=frameshifted;gbkey=CDS;gene=rfaC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012990576.1;locus_tag=J4731_25480;product=lipopolysaccharide heptosyltransferase RfaC;pseudo=true;transl_table=11
JAGETS010000126.1	Genbank	pseudogene	9630	10669	.	-	.	ID=gene-J4731_25485;Name=rfaF;gbkey=Gene;gene=rfaF;gene_biotype=pseudogene;locus_tag=J4731_25485;pseudo=true
JAGETS010000126.1	Protein Homology	CDS	9630	10669	.	-	0	ID=cds-J4731_25485;Parent=gene-J4731_25485;Note=frameshifted;gbkey=CDS;gene=rfaF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004265150.1;locus_tag=J4731_25485;product=ADP-heptose--LPS heptosyltransferase RfaF;pseudo=true;transl_table=11
JAGETS010000126.1	Genbank	pseudogene	10693	11628	.	-	.	ID=gene-J4731_25490;Name=rfaD;gbkey=Gene;gene=rfaD;gene_biotype=pseudogene;locus_tag=J4731_25490;pseudo=true
JAGETS010000126.1	Protein Homology	CDS	10693	11628	.	-	0	ID=cds-J4731_25490;Parent=gene-J4731_25490;Note=frameshifted;gbkey=CDS;gene=rfaD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020233050.1;locus_tag=J4731_25490;product=ADP-glyceromanno-heptose 6-epimerase;pseudo=true;transl_table=11
JAGETS010000126.1	Genbank	pseudogene	11857	13042	.	+	.	ID=gene-J4731_25495;Name=J4731_25495;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_25495;pseudo=true
JAGETS010000126.1	Protein Homology	CDS	11857	13042	.	+	0	ID=cds-J4731_25495;Parent=gene-J4731_25495;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004924294.1;locus_tag=J4731_25495;product=glycine C-acetyltransferase;pseudo=true;transl_table=11
JAGETS010000126.1	Genbank	pseudogene	13061	14080	.	+	.	ID=gene-J4731_25500;Name=tdh;gbkey=Gene;gene=tdh;gene_biotype=pseudogene;locus_tag=J4731_25500;pseudo=true
JAGETS010000126.1	Protein Homology	CDS	13061	14080	.	+	0	ID=cds-J4731_25500;Parent=gene-J4731_25500;Note=frameshifted;gbkey=CDS;gene=tdh;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120462.1;locus_tag=J4731_25500;product=L-threonine 3-dehydrogenase;pseudo=true;transl_table=11
JAGETS010000126.1	Genbank	pseudogene	14139	15142	.	-	.	ID=gene-J4731_25505;Name=J4731_25505;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_25505;pseudo=true
JAGETS010000126.1	Protein Homology	CDS	14139	15142	.	-	0	ID=cds-J4731_25505;Parent=gene-J4731_25505;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004265157.1;locus_tag=J4731_25505;product=divergent polysaccharide deacetylase family protein;pseudo=true;transl_table=11
JAGETS010000126.1	Genbank	pseudogene	15221	16498	.	-	.	ID=gene-J4731_25510;Name=envC;gbkey=Gene;gene=envC;gene_biotype=pseudogene;locus_tag=J4731_25510;pseudo=true
JAGETS010000126.1	Protein Homology	CDS	15221	16498	.	-	0	ID=cds-J4731_25510;Parent=gene-J4731_25510;Note=frameshifted;gbkey=CDS;gene=envC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006660563.1;locus_tag=J4731_25510;product=murein hydrolase activator EnvC;pseudo=true;transl_table=11
JAGETS010000126.1	Genbank	pseudogene	16965	17357	.	+	.	ID=gene-J4731_25515;Name=J4731_25515;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_25515;pseudo=true
JAGETS010000126.1	Protein Homology	CDS	16965	17357	.	+	0	ID=cds-J4731_25515;Parent=gene-J4731_25515;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005016724.1;locus_tag=J4731_25515;product=rhodanese-like domain-containing protein;pseudo=true;transl_table=11
JAGETS010000126.1	Genbank	pseudogene	17714	18184	.	+	.	ID=gene-J4731_25520;Name=secB;gbkey=Gene;gene=secB;gene_biotype=pseudogene;locus_tag=J4731_25520;pseudo=true
JAGETS010000126.1	Protein Homology	CDS	17714	18184	.	+	0	ID=cds-J4731_25520;Parent=gene-J4731_25520;Note=frameshifted;gbkey=CDS;gene=secB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005164715.1;locus_tag=J4731_25520;product=protein-export chaperone SecB;pseudo=true;transl_table=11
JAGETS010000126.1	Genbank	pseudogene	18144	19205	.	+	.	ID=gene-J4731_25525;Name=gpsA;gbkey=Gene;gene=gpsA;gene_biotype=pseudogene;locus_tag=J4731_25525;pseudo=true
JAGETS010000126.1	Protein Homology	CDS	18144	19205	.	+	0	ID=cds-J4731_25525;Parent=gene-J4731_25525;Note=frameshifted;gbkey=CDS;gene=gpsA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004236642.1;locus_tag=J4731_25525;product=NAD(P)H-dependent glycerol-3-phosphate dehydrogenase;pseudo=true;transl_table=11
JAGETS010000126.1	Genbank	pseudogene	19252	20062	.	+	.	ID=gene-J4731_25530;Name=cysE;gbkey=Gene;gene=cysE;gene_biotype=pseudogene;locus_tag=J4731_25530;pseudo=true
JAGETS010000126.1	Protein Homology	CDS	19252	20062	.	+	0	ID=cds-J4731_25530;Parent=gene-J4731_25530;Note=frameshifted;gbkey=CDS;gene=cysE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015462554.1;locus_tag=J4731_25530;product=serine O-acetyltransferase;pseudo=true;transl_table=11
JAGETS010000126.1	Genbank	pseudogene	20363	20865	.	-	.	ID=gene-J4731_25535;Name=trmL;gbkey=Gene;gene=trmL;gene_biotype=pseudogene;locus_tag=J4731_25535;pseudo=true
JAGETS010000126.1	Protein Homology	CDS	20363	20865	.	-	0	ID=cds-J4731_25535;Parent=gene-J4731_25535;Note=frameshifted%3B internal stop;gbkey=CDS;gene=trmL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004705053.1;locus_tag=J4731_25535;product=tRNA (uridine(34)/cytosine(34)/5-carboxymethylaminomethyluridine(34)-2'-O)-methyltransferase TrmL;pseudo=true;transl_table=11
JAGETS010000126.1	Genbank	pseudogene	21024	22044	.	-	.	ID=gene-J4731_25540;Name=galE;gbkey=Gene;gene=galE;gene_biotype=pseudogene;locus_tag=J4731_25540;pseudo=true
JAGETS010000126.1	Protein Homology	CDS	21024	22044	.	-	0	ID=cds-J4731_25540;Parent=gene-J4731_25540;Note=frameshifted%3B internal stop;gbkey=CDS;gene=galE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004921658.1;locus_tag=J4731_25540;product=UDP-glucose 4-epimerase GalE;pseudo=true;transl_table=11
JAGETS010000126.1	Genbank	gene	22515	22682	.	-	.	ID=gene-J4731_25545;Name=J4731_25545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_25545
JAGETS010000126.1	Protein Homology	CDS	22515	22682	.	-	0	ID=cds-MBO1930006.1;Parent=gene-J4731_25545;Dbxref=NCBI_GP:MBO1930006.1;Name=MBO1930006.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014051.1;locus_tag=J4731_25545;product=oligosaccharide flippase family protein;protein_id=MBO1930006.1;transl_table=11
JAGETS010000126.1	Genbank	gene	23115	23306	.	-	.	ID=gene-J4731_25550;Name=J4731_25550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_25550
JAGETS010000126.1	GeneMarkS-2+	CDS	23115	23306	.	-	0	ID=cds-MBO1930007.1;Parent=gene-J4731_25550;Dbxref=NCBI_GP:MBO1930007.1;Name=MBO1930007.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_25550;product=hypothetical protein;protein_id=MBO1930007.1;transl_table=11
JAGETS010000126.1	Genbank	pseudogene	23396	25415	.	-	.	ID=gene-J4731_25555;Name=J4731_25555;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_25555;pseudo=true
JAGETS010000126.1	Protein Homology	CDS	23396	25415	.	-	0	ID=cds-J4731_25555;Parent=gene-J4731_25555;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006660557.1;locus_tag=J4731_25555;product=polysaccharide biosynthesis tyrosine autokinase;pseudo=true;transl_table=11
JAGETS010000126.1	Genbank	pseudogene	25450	25907	.	-	.	ID=gene-J4731_25560;Name=J4731_25560;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_25560;pseudo=true
JAGETS010000126.1	Protein Homology	CDS	25450	25907	.	-	0	ID=cds-J4731_25560;Parent=gene-J4731_25560;Note=Wzb shows phosphatase activity towards the autophosphorylated Wzc protein%2C which induces colanic acid biosynthesis%3B catalyzes the phosphorylation of UDP-glucose dehydrogenase%2C an enzyme involved in colanic acid biosynthesis%3B frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004924339.1;locus_tag=J4731_25560;product=protein tyrosine phosphatase;pseudo=true;transl_table=11
JAGETS010000126.1	Genbank	pseudogene	25913	27049	.	-	.	ID=gene-J4731_25565;Name=J4731_25565;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_25565;pseudo=true
JAGETS010000126.1	Protein Homology	CDS	25913	27049	.	-	0	ID=cds-J4731_25565;Parent=gene-J4731_25565;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001746257.1;locus_tag=J4731_25565;product=polysaccharide biosynthesis/export family protein;pseudo=true;transl_table=11
JAGETS010000126.1	Genbank	pseudogene	27086	28031	.	-	.	ID=gene-J4731_25570;Name=J4731_25570;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_25570;pseudo=true
JAGETS010000126.1	Protein Homology	CDS	27086	28031	.	-	0	ID=cds-J4731_25570;Parent=gene-J4731_25570;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246448.1;locus_tag=J4731_25570;product=NAD-dependent epimerase/dehydratase family protein;pseudo=true;transl_table=11
JAGETS010000126.1	Genbank	pseudogene	28046	28775	.	-	.	ID=gene-J4731_25575;Name=J4731_25575;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_25575;pseudo=true
JAGETS010000126.1	Protein Homology	CDS	28046	28775	.	-	0	ID=cds-J4731_25575;Parent=gene-J4731_25575;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000424607.1;locus_tag=J4731_25575;product=glycosyltransferase family 2 protein;pseudo=true;transl_table=11
JAGETS010000126.1	Genbank	pseudogene	28791	29953	.	-	.	ID=gene-J4731_25580;Name=J4731_25580;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_25580;pseudo=true
JAGETS010000126.1	Protein Homology	CDS	28791	29953	.	-	0	ID=cds-J4731_25580;Parent=gene-J4731_25580;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002992300.1;locus_tag=J4731_25580;product=nucleotide sugar dehydrogenase;pseudo=true;transl_table=11
JAGETS010000126.1	Genbank	gene	30237	30554	.	-	.	ID=gene-J4731_25585;Name=J4731_25585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_25585
JAGETS010000126.1	Protein Homology	CDS	30237	30554	.	-	0	ID=cds-MBO1930008.1;Parent=gene-J4731_25585;Dbxref=NCBI_GP:MBO1930008.1;Name=MBO1930008.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021127.1;locus_tag=J4731_25585;product=CapA family protein;protein_id=MBO1930008.1;transl_table=11
JAGETS010000126.1	Genbank	gene	30506	30799	.	-	.	ID=gene-J4731_25590;Name=J4731_25590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_25590
JAGETS010000126.1	Protein Homology	CDS	30506	30799	.	-	0	ID=cds-MBO1930009.1;Parent=gene-J4731_25590;Dbxref=NCBI_GP:MBO1930009.1;Name=MBO1930009.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021127.1;locus_tag=J4731_25590;product=CapA family protein;protein_id=MBO1930009.1;transl_table=11
JAGETS010000126.1	Genbank	gene	30792	30926	.	-	.	ID=gene-J4731_25595;Name=J4731_25595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_25595
JAGETS010000126.1	Protein Homology	CDS	30792	30926	.	-	0	ID=cds-MBO1930010.1;Parent=gene-J4731_25595;Dbxref=NCBI_GP:MBO1930010.1;Name=MBO1930010.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021127.1;locus_tag=J4731_25595;product=CapA family protein;protein_id=MBO1930010.1;transl_table=11
JAGETS010000126.1	Genbank	gene	30946	31131	.	-	.	ID=gene-J4731_25600;Name=J4731_25600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_25600
JAGETS010000126.1	GeneMarkS-2+	CDS	30946	31131	.	-	0	ID=cds-MBO1930011.1;Parent=gene-J4731_25600;Dbxref=NCBI_GP:MBO1930011.1;Name=MBO1930011.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_25600;product=hypothetical protein;protein_id=MBO1930011.1;transl_table=11
JAGETS010000126.1	Genbank	gene	31145	31447	.	-	.	ID=gene-J4731_25605;Name=J4731_25605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_25605
JAGETS010000126.1	Protein Homology	CDS	31145	31447	.	-	0	ID=cds-MBO1930012.1;Parent=gene-J4731_25605;Dbxref=NCBI_GP:MBO1930012.1;Name=MBO1930012.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025663.1;locus_tag=J4731_25605;product=hypothetical protein;protein_id=MBO1930012.1;transl_table=11
JAGETS010000126.1	Genbank	gene	31525	31881	.	-	.	ID=gene-J4731_25610;Name=J4731_25610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_25610
JAGETS010000126.1	Protein Homology	CDS	31525	31881	.	-	0	ID=cds-MBO1930013.1;Parent=gene-J4731_25610;Dbxref=NCBI_GP:MBO1930013.1;Name=MBO1930013.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025663.1;locus_tag=J4731_25610;product=hypothetical protein;protein_id=MBO1930013.1;transl_table=11
JAGETS010000126.1	Genbank	gene	32540	32920	.	-	.	ID=gene-J4731_25615;Name=J4731_25615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_25615
JAGETS010000126.1	Protein Homology	CDS	32540	32920	.	-	0	ID=cds-MBO1930014.1;Parent=gene-J4731_25615;Dbxref=NCBI_GP:MBO1930014.1;Name=MBO1930014.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012744.1;locus_tag=J4731_25615;product=glycosyltransferase family 4 protein;protein_id=MBO1930014.1;transl_table=11
JAGETS010000126.1	Genbank	gene	33422	33658	.	-	.	ID=gene-J4731_25620;Name=J4731_25620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_25620
JAGETS010000126.1	GeneMarkS-2+	CDS	33422	33658	.	-	0	ID=cds-MBO1930015.1;Parent=gene-J4731_25620;Dbxref=NCBI_GP:MBO1930015.1;Name=MBO1930015.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_25620;product=hypothetical protein;protein_id=MBO1930015.1;transl_table=11
JAGETS010000126.1	Genbank	gene	34256	34423	.	-	.	ID=gene-J4731_25625;Name=J4731_25625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_25625
JAGETS010000126.1	Protein Homology	CDS	34256	34423	.	-	0	ID=cds-MBO1930016.1;Parent=gene-J4731_25625;Dbxref=NCBI_GP:MBO1930016.1;Name=MBO1930016.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012745.1;locus_tag=J4731_25625;product=glycosyltransferase;protein_id=MBO1930016.1;transl_table=11
JAGETS010000126.1	Genbank	gene	34434	34571	.	-	.	ID=gene-J4731_25630;Name=J4731_25630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_25630
JAGETS010000126.1	Protein Homology	CDS	34434	34571	.	-	0	ID=cds-MBO1930017.1;Parent=gene-J4731_25630;Dbxref=NCBI_GP:MBO1930017.1;Name=MBO1930017.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012745.1;locus_tag=J4731_25630;product=glycosyltransferase;protein_id=MBO1930017.1;transl_table=11
JAGETS010000126.1	Genbank	pseudogene	36485	37913	.	-	.	ID=gene-J4731_25635;Name=J4731_25635;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_25635;pseudo=true
JAGETS010000126.1	Protein Homology	CDS	36485	37913	.	-	0	ID=cds-J4731_25635;Parent=gene-J4731_25635;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004265220.1;locus_tag=J4731_25635;product=capsule assembly Wzi family protein;pseudo=true;transl_table=11
JAGETS010000126.1	Genbank	pseudogene	38374	39739	.	-	.	ID=gene-J4731_25640;Name=cpxA;gbkey=Gene;gene=cpxA;gene_biotype=pseudogene;locus_tag=J4731_25640;pseudo=true
JAGETS010000126.1	Protein Homology	CDS	38374	39739	.	-	0	ID=cds-J4731_25640;Parent=gene-J4731_25640;Note=frameshifted;gbkey=CDS;gene=cpxA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006816215.1;locus_tag=J4731_25640;product=envelope stress sensor histidine kinase CpxA;pseudo=true;transl_table=11
JAGETS010000126.1	Genbank	pseudogene	39736	40430	.	-	.	ID=gene-J4731_25645;Name=cpxR;gbkey=Gene;gene=cpxR;gene_biotype=pseudogene;locus_tag=J4731_25645;pseudo=true
JAGETS010000126.1	Protein Homology	CDS	39736	40430	.	-	0	ID=cds-J4731_25645;Parent=gene-J4731_25645;Note=frameshifted%3B internal stop;gbkey=CDS;gene=cpxR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462940.1;locus_tag=J4731_25645;product=envelope stress response regulator transcription factor CpxR;pseudo=true;transl_table=11
JAGETS010000126.1	Genbank	pseudogene	40580	41146	.	+	.	ID=gene-J4731_25650;Name=J4731_25650;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_25650;pseudo=true
JAGETS010000126.1	Protein Homology	CDS	40580	41146	.	+	0	ID=cds-J4731_25650;Parent=gene-J4731_25650;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004265226.1;locus_tag=J4731_25650;product=Spy/CpxP family protein refolding chaperone;pseudo=true;transl_table=11
JAGETS010000126.1	Genbank	pseudogene	41399	41702	.	+	.	ID=gene-J4731_25655;Name=J4731_25655;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_25655;pseudo=true
JAGETS010000126.1	Protein Homology	CDS	41399	41702	.	+	0	ID=cds-J4731_25655;Parent=gene-J4731_25655;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011146555.1;locus_tag=J4731_25655;product=type II toxin-antitoxin system RelE/ParE family toxin;pseudo=true;transl_table=11
JAGETS010000126.1	Genbank	pseudogene	41692	41918	.	+	.	ID=gene-J4731_25660;Name=J4731_25660;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_25660;pseudo=true
JAGETS010000126.1	Protein Homology	CDS	41692	41918	.	+	0	ID=cds-J4731_25660;Parent=gene-J4731_25660;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012368902.1;locus_tag=J4731_25660;product=putative addiction module antidote protein;pseudo=true;transl_table=11
JAGETS010000126.1	Genbank	pseudogene	42054	42627	.	+	.	ID=gene-J4731_25665;Name=J4731_25665;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_25665;pseudo=true
JAGETS010000126.1	Protein Homology	CDS	42054	42627	.	+	0	ID=cds-J4731_25665;Parent=gene-J4731_25665;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004917423.1;locus_tag=J4731_25665;product=HutD family protein;pseudo=true;transl_table=11
JAGETS010000126.1	Genbank	pseudogene	42919	43593	.	+	.	ID=gene-J4731_25670;Name=J4731_25670;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_25670;pseudo=true
JAGETS010000126.1	Protein Homology	CDS	42919	43593	.	+	0	ID=cds-J4731_25670;Parent=gene-J4731_25670;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007664659.1;locus_tag=J4731_25670;product=M48 family metallopeptidase;pseudo=true;transl_table=11
JAGETS010000126.1	Genbank	pseudogene	43829	44457	.	+	.	ID=gene-J4731_25675;Name=J4731_25675;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_25675;pseudo=true
JAGETS010000126.1	Protein Homology	CDS	43829	44457	.	+	0	ID=cds-J4731_25675;Parent=gene-J4731_25675;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017627890.1;locus_tag=J4731_25675;product=1-acyl-sn-glycerol-3-phosphate acyltransferase;pseudo=true;transl_table=11
JAGETS010000126.1	Genbank	pseudogene	44462	45400	.	+	.	ID=gene-J4731_25680;Name=J4731_25680;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_25680;pseudo=true
JAGETS010000126.1	Protein Homology	CDS	44462	45400	.	+	0	ID=cds-J4731_25680;Parent=gene-J4731_25680;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006660530.1;locus_tag=J4731_25680;product=phosphatidate cytidylyltransferase;pseudo=true;transl_table=11
JAGETS010000126.1	Genbank	pseudogene	45803	46775	.	+	.	ID=gene-J4731_25685;Name=pfkA;gbkey=Gene;gene=pfkA;gene_biotype=pseudogene;locus_tag=J4731_25685;pseudo=true
JAGETS010000126.1	Protein Homology	CDS	45803	46775	.	+	0	ID=cds-J4731_25685;Parent=gene-J4731_25685;Note=frameshifted;gbkey=CDS;gene=pfkA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004265237.1;locus_tag=J4731_25685;product=6-phosphofructokinase;pseudo=true;transl_table=11
JAGETS010000126.1	Genbank	pseudogene	47039	48044	.	+	.	ID=gene-J4731_25690;Name=J4731_25690;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_25690;pseudo=true
JAGETS010000126.1	Protein Homology	CDS	47039	48044	.	+	0	ID=cds-J4731_25690;Parent=gene-J4731_25690;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304757.1;locus_tag=J4731_25690;product=sulfate ABC transporter substrate-binding protein;pseudo=true;transl_table=11
JAGETS010000126.1	Genbank	pseudogene	48379	49332	.	-	.	ID=gene-J4731_25695;Name=J4731_25695;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_25695;pseudo=true
JAGETS010000126.1	Protein Homology	CDS	48379	49332	.	-	0	ID=cds-J4731_25695;Parent=gene-J4731_25695;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004924417.1;locus_tag=J4731_25695;product=OmpG family monomeric porin;pseudo=true;transl_table=11
JAGETS010000126.1	Genbank	pseudogene	49455	51220	.	-	.	ID=gene-J4731_25700;Name=J4731_25700;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_25700;pseudo=true
JAGETS010000126.1	Protein Homology	CDS	49455	51220	.	-	0	ID=cds-J4731_25700;Parent=gene-J4731_25700;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004924420.1;locus_tag=J4731_25700;product=glycoside hydrolase family 3 protein;pseudo=true;transl_table=11
JAGETS010000126.1	Genbank	pseudogene	51708	52661	.	-	.	ID=gene-J4731_25705;Name=J4731_25705;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_25705;pseudo=true
JAGETS010000126.1	Protein Homology	CDS	51708	52661	.	-	0	ID=cds-J4731_25705;Parent=gene-J4731_25705;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004265280.1;locus_tag=J4731_25705;product=OmpG family monomeric porin;pseudo=true;transl_table=11
JAGETS010000126.1	Genbank	pseudogene	53085	53807	.	-	.	ID=gene-J4731_25710;Name=tpiA;gbkey=Gene;gene=tpiA;gene_biotype=pseudogene;locus_tag=J4731_25710;pseudo=true
JAGETS010000126.1	Protein Homology	CDS	53085	53807	.	-	0	ID=cds-J4731_25710;Parent=gene-J4731_25710;Note=frameshifted;gbkey=CDS;gene=tpiA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004265282.1;locus_tag=J4731_25710;product=triose-phosphate isomerase;pseudo=true;transl_table=11
JAGETS010000126.1	Genbank	pseudogene	53978	54577	.	-	.	ID=gene-J4731_25715;Name=J4731_25715;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_25715;pseudo=true
JAGETS010000126.1	Protein Homology	CDS	53978	54577	.	-	0	ID=cds-J4731_25715;Parent=gene-J4731_25715;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006663191.1;locus_tag=J4731_25715;product=DUF1454 family protein;pseudo=true;transl_table=11
JAGETS010000126.1	Genbank	pseudogene	54627	55038	.	+	.	ID=gene-J4731_25720;Name=J4731_25720;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_25720;pseudo=true
JAGETS010000126.1	Protein Homology	CDS	54627	55038	.	+	0	ID=cds-J4731_25720;Parent=gene-J4731_25720;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008913561.1;locus_tag=J4731_25720;product=DUF805 domain-containing protein;pseudo=true;transl_table=11
JAGETS010000126.1	Genbank	pseudogene	55095	55856	.	-	.	ID=gene-J4731_25725;Name=fpr;gbkey=Gene;gene=fpr;gene_biotype=pseudogene;locus_tag=J4731_25725;pseudo=true
JAGETS010000126.1	Protein Homology	CDS	55095	55856	.	-	0	ID=cds-J4731_25725;Parent=gene-J4731_25725;Note=frameshifted;gbkey=CDS;gene=fpr;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004924669.1;locus_tag=J4731_25725;product=ferredoxin--NADP(+) reductase;pseudo=true;transl_table=11
JAGETS010000126.1	Genbank	gene	56039	56176	.	+	.	ID=gene-J4731_25730;Name=J4731_25730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_25730
JAGETS010000126.1	GeneMarkS-2+	CDS	56039	56176	.	+	0	ID=cds-MBO1930018.1;Parent=gene-J4731_25730;Dbxref=NCBI_GP:MBO1930018.1;Name=MBO1930018.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_25730;product=hypothetical protein;protein_id=MBO1930018.1;transl_table=11
JAGETS010000126.1	Genbank	pseudogene	56339	57454	.	+	.	ID=gene-J4731_25735;Name=emrD;gbkey=Gene;gene=emrD;gene_biotype=pseudogene;locus_tag=J4731_25735;pseudo=true
JAGETS010000126.1	Protein Homology	CDS	56339	57454	.	+	0	ID=cds-J4731_25735;Parent=gene-J4731_25735;Note=frameshifted%3B internal stop;gbkey=CDS;gene=emrD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016929712.1;locus_tag=J4731_25735;product=multidrug efflux MFS transporter EmrD;pseudo=true;transl_table=11
JAGETS010000126.1	Genbank	gene	58107	58262	.	-	.	ID=gene-J4731_25740;Name=J4731_25740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_25740
JAGETS010000126.1	GeneMarkS-2+	CDS	58107	58262	.	-	0	ID=cds-MBO1930019.1;Parent=gene-J4731_25740;Dbxref=NCBI_GP:MBO1930019.1;Name=MBO1930019.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_25740;product=hypothetical protein;protein_id=MBO1930019.1;transl_table=11
JAGETS010000126.1	Genbank	gene	59154	59684	.	-	.	ID=gene-J4731_25745;Name=J4731_25745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_25745
JAGETS010000126.1	GeneMarkS-2+	CDS	59154	59684	.	-	0	ID=cds-MBO1930020.1;Parent=gene-J4731_25745;Dbxref=NCBI_GP:MBO1930020.1;Name=MBO1930020.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_25745;product=hypothetical protein;protein_id=MBO1930020.1;transl_table=11
JAGETS010000126.1	Genbank	gene	59701	60072	.	-	.	ID=gene-J4731_25750;Name=J4731_25750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_25750
JAGETS010000126.1	GeneMarkS-2+	CDS	59701	60072	.	-	0	ID=cds-MBO1930021.1;Parent=gene-J4731_25750;Dbxref=NCBI_GP:MBO1930021.1;Name=MBO1930021.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_25750;product=hypothetical protein;protein_id=MBO1930021.1;transl_table=11
JAGETS010000126.1	Genbank	gene	60392	60607	.	-	.	ID=gene-J4731_25755;Name=J4731_25755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_25755
JAGETS010000126.1	GeneMarkS-2+	CDS	60392	60607	.	-	0	ID=cds-MBO1930022.1;Parent=gene-J4731_25755;Dbxref=NCBI_GP:MBO1930022.1;Name=MBO1930022.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_25755;product=hypothetical protein;protein_id=MBO1930022.1;transl_table=11
JAGETS010000126.1	Genbank	gene	60691	61158	.	-	.	ID=gene-J4731_25760;Name=J4731_25760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_25760
JAGETS010000126.1	GeneMarkS-2+	CDS	60691	61158	.	-	0	ID=cds-MBO1930023.1;Parent=gene-J4731_25760;Dbxref=NCBI_GP:MBO1930023.1;Name=MBO1930023.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_25760;product=hypothetical protein;protein_id=MBO1930023.1;transl_table=11
JAGETS010000126.1	Genbank	pseudogene	61451	62886	.	-	.	ID=gene-J4731_25765;Name=glpK;gbkey=Gene;gene=glpK;gene_biotype=pseudogene;locus_tag=J4731_25765;pseudo=true
JAGETS010000126.1	Protein Homology	CDS	61451	62886	.	-	0	ID=cds-J4731_25765;Parent=gene-J4731_25765;Note=frameshifted;gbkey=CDS;gene=glpK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246422.1;locus_tag=J4731_25765;product=glycerol kinase GlpK;pseudo=true;transl_table=11
JAGETS010000126.1	Genbank	pseudogene	62922	63754	.	-	.	ID=gene-J4731_25770;Name=J4731_25770;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_25770;pseudo=true
JAGETS010000126.1	Protein Homology	CDS	62922	63754	.	-	0	ID=cds-J4731_25770;Parent=gene-J4731_25770;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000084268.1;locus_tag=J4731_25770;product=aquaporin family protein;pseudo=true;transl_table=11
JAGETS010000126.1	Genbank	gene	64563	64750	.	+	.	ID=gene-J4731_25775;Name=J4731_25775;end_range=64750,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_25775;partial=true
JAGETS010000126.1	GeneMarkS-2+	CDS	64563	64750	.	+	0	ID=cds-MBO1930024.1;Parent=gene-J4731_25775;Dbxref=NCBI_GP:MBO1930024.1;Name=MBO1930024.1;end_range=64750,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_25775;partial=true;product=hypothetical protein;protein_id=MBO1930024.1;transl_table=11
##sequence-region JAGETS010000127.1 1 74378
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=587
JAGETS010000127.1	Genbank	region	1	74378	.	+	.	ID=JAGETS010000127.1:1..74378;Dbxref=taxon:587;collected-by=NHLS;collection-date=2018;country=South Africa: Pretoria;gbkey=Src;isolation-source=stool;lat-lon=25.7479 S 28.2293 E;mol_type=genomic DNA;nat-host=porcine;strain=SG003
JAGETS010000127.1	Genbank	gene	56	178	.	+	.	ID=gene-J4731_25780;Name=J4731_25780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_25780
JAGETS010000127.1	Protein Homology	CDS	56	178	.	+	0	ID=cds-MBO1930025.1;Parent=gene-J4731_25780;Dbxref=NCBI_GP:MBO1930025.1;Name=MBO1930025.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001303428.1;locus_tag=J4731_25780;product=DUF2384 domain-containing protein;protein_id=MBO1930025.1;transl_table=11
JAGETS010000127.1	Genbank	pseudogene	175	616	.	+	.	ID=gene-J4731_25785;Name=J4731_25785;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_25785;pseudo=true
JAGETS010000127.1	Protein Homology	CDS	175	616	.	+	0	ID=cds-J4731_25785;Parent=gene-J4731_25785;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000578524.1;locus_tag=J4731_25785;product=RES domain-containing protein;pseudo=true;transl_table=11
JAGETS010000127.1	Genbank	pseudogene	628	1492	.	-	.	ID=gene-J4731_25790;Name=J4731_25790;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_25790;pseudo=true
JAGETS010000127.1	Protein Homology	CDS	628	1492	.	-	0	ID=cds-J4731_25790;Parent=gene-J4731_25790;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004242940.1;locus_tag=J4731_25790;product=LysR family transcriptional regulator;pseudo=true;transl_table=11
JAGETS010000127.1	Genbank	pseudogene	1538	2491	.	-	.	ID=gene-J4731_25795;Name=accA;gbkey=Gene;gene=accA;gene_biotype=pseudogene;locus_tag=J4731_25795;pseudo=true
JAGETS010000127.1	Protein Homology	CDS	1538	2491	.	-	0	ID=cds-J4731_25795;Parent=gene-J4731_25795;Note=frameshifted%3B internal stop;gbkey=CDS;gene=accA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004240161.1;locus_tag=J4731_25795;product=acetyl-CoA carboxylase carboxyl transferase subunit alpha;pseudo=true;transl_table=11
JAGETS010000127.1	Genbank	pseudogene	2595	3011	.	-	.	ID=gene-J4731_25800;Name=J4731_25800;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_25800;pseudo=true
JAGETS010000127.1	Protein Homology	CDS	2595	3011	.	-	0	ID=cds-J4731_25800;Parent=gene-J4731_25800;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004254515.1;locus_tag=J4731_25800;product=helix-turn-helix domain-containing protein;pseudo=true;transl_table=11
JAGETS010000127.1	Genbank	pseudogene	3042	3603	.	-	.	ID=gene-J4731_25805;Name=J4731_25805;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_25805;pseudo=true
JAGETS010000127.1	Protein Homology	CDS	3042	3603	.	-	0	ID=cds-J4731_25805;Parent=gene-J4731_25805;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004254518.1;locus_tag=J4731_25805;product=GNAT family N-acetyltransferase;pseudo=true;transl_table=11
JAGETS010000127.1	Genbank	pseudogene	3584	4989	.	-	.	ID=gene-J4731_25810;Name=J4731_25810;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_25810;pseudo=true
JAGETS010000127.1	Protein Homology	CDS	3584	4989	.	-	0	ID=cds-J4731_25810;Parent=gene-J4731_25810;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005128994.1;locus_tag=J4731_25810;product=AMP nucleosidase;pseudo=true;transl_table=11
JAGETS010000127.1	Genbank	pseudogene	5126	6028	.	-	.	ID=gene-J4731_25815;Name=J4731_25815;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_25815;pseudo=true
JAGETS010000127.1	Protein Homology	CDS	5126	6028	.	-	0	ID=cds-J4731_25815;Parent=gene-J4731_25815;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004251269.1;locus_tag=J4731_25815;product=AEC family transporter;pseudo=true;transl_table=11
JAGETS010000127.1	Genbank	pseudogene	6351	7077	.	+	.	ID=gene-J4731_25820;Name=J4731_25820;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_25820;pseudo=true
JAGETS010000127.1	Protein Homology	CDS	6351	7077	.	+	0	ID=cds-J4731_25820;Parent=gene-J4731_25820;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007730411.1;locus_tag=J4731_25820;product=basic amino acid ABC transporter substrate-binding protein;pseudo=true;transl_table=11
JAGETS010000127.1	Genbank	pseudogene	7142	7879	.	+	.	ID=gene-J4731_25825;Name=J4731_25825;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_25825;pseudo=true
JAGETS010000127.1	Protein Homology	CDS	7142	7879	.	+	0	ID=cds-J4731_25825;Parent=gene-J4731_25825;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007663479.1;locus_tag=J4731_25825;product=amino acid ABC transporter permease;pseudo=true;transl_table=11
JAGETS010000127.1	Genbank	pseudogene	7921	8552	.	+	.	ID=gene-J4731_25830;Name=J4731_25830;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_25830;pseudo=true
JAGETS010000127.1	Protein Homology	CDS	7921	8552	.	+	0	ID=cds-J4731_25830;Parent=gene-J4731_25830;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005181634.1;locus_tag=J4731_25830;product=amino acid ABC transporter ATP-binding protein;pseudo=true;transl_table=11
JAGETS010000127.1	Genbank	pseudogene	8652	9196	.	+	.	ID=gene-J4731_25835;Name=J4731_25835;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_25835;pseudo=true
JAGETS010000127.1	Protein Homology	CDS	8652	9196	.	+	0	ID=cds-J4731_25835;Parent=gene-J4731_25835;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006661779.1;locus_tag=J4731_25835;product=NADAR family protein;pseudo=true;transl_table=11
JAGETS010000127.1	Genbank	pseudogene	9828	11284	.	+	.	ID=gene-J4731_25840;Name=J4731_25840;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_25840;pseudo=true
JAGETS010000127.1	Protein Homology	CDS	9828	11284	.	+	0	ID=cds-J4731_25840;Parent=gene-J4731_25840;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006659865.1;locus_tag=J4731_25840;product=PLP-dependent aminotransferase family protein;pseudo=true;transl_table=11
JAGETS010000127.1	Genbank	pseudogene	11377	11954	.	+	.	ID=gene-J4731_25845;Name=J4731_25845;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_25845;pseudo=true
JAGETS010000127.1	Protein Homology	CDS	11377	11954	.	+	0	ID=cds-J4731_25845;Parent=gene-J4731_25845;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006659866.1;locus_tag=J4731_25845;product=YebB family permuted papain-like enzyme;pseudo=true;transl_table=11
JAGETS010000127.1	Genbank	pseudogene	12156	12484	.	-	.	ID=gene-J4731_25850;Name=J4731_25850;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_25850;pseudo=true
JAGETS010000127.1	Protein Homology	CDS	12156	12484	.	-	0	ID=cds-J4731_25850;Parent=gene-J4731_25850;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308490.1;locus_tag=J4731_25850;product=YajD family HNH nuclease;pseudo=true;transl_table=11
JAGETS010000127.1	Genbank	pseudogene	12663	13678	.	-	.	ID=gene-J4731_25855;Name=J4731_25855;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_25855;pseudo=true
JAGETS010000127.1	Protein Homology	CDS	12663	13678	.	-	0	ID=cds-J4731_25855;Parent=gene-J4731_25855;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227444.1;locus_tag=J4731_25855;product=methionine synthase;pseudo=true;transl_table=11
JAGETS010000127.1	Genbank	pseudogene	13708	14651	.	-	.	ID=gene-J4731_25860;Name=J4731_25860;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_25860;pseudo=true
JAGETS010000127.1	Protein Homology	CDS	13708	14651	.	-	0	ID=cds-J4731_25860;Parent=gene-J4731_25860;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003851596.1;locus_tag=J4731_25860;product=DUF1852 domain-containing protein;pseudo=true;transl_table=11
JAGETS010000127.1	Genbank	pseudogene	15173	16735	.	-	.	ID=gene-J4731_25865;Name=ahpF;gbkey=Gene;gene=ahpF;gene_biotype=pseudogene;locus_tag=J4731_25865;pseudo=true
JAGETS010000127.1	Protein Homology	CDS	15173	16735	.	-	0	ID=cds-J4731_25865;Parent=gene-J4731_25865;Note=frameshifted;gbkey=CDS;gene=ahpF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014658325.1;locus_tag=J4731_25865;product=alkyl hydroperoxide reductase subunit F;pseudo=true;transl_table=11
JAGETS010000127.1	Genbank	pseudogene	16853	17414	.	-	.	ID=gene-J4731_25870;Name=ahpC;gbkey=Gene;gene=ahpC;gene_biotype=pseudogene;locus_tag=J4731_25870;pseudo=true
JAGETS010000127.1	Protein Homology	CDS	16853	17414	.	-	0	ID=cds-J4731_25870;Parent=gene-J4731_25870;Note=frameshifted;gbkey=CDS;gene=ahpC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003858764.1;locus_tag=J4731_25870;product=alkyl hydroperoxide reductase subunit C;pseudo=true;transl_table=11
JAGETS010000127.1	Genbank	pseudogene	17602	18718	.	-	.	ID=gene-J4731_25875;Name=J4731_25875;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_25875;pseudo=true
JAGETS010000127.1	Protein Homology	CDS	17602	18718	.	-	0	ID=cds-J4731_25875;Parent=gene-J4731_25875;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462486.1;locus_tag=J4731_25875;product=ABC transporter permease;pseudo=true;transl_table=11
JAGETS010000127.1	Genbank	pseudogene	18724	21469	.	-	.	ID=gene-J4731_25880;Name=rbbA;gbkey=Gene;gene=rbbA;gene_biotype=pseudogene;locus_tag=J4731_25880;pseudo=true
JAGETS010000127.1	Protein Homology	CDS	18724	21469	.	-	0	ID=cds-J4731_25880;Parent=gene-J4731_25880;Note=frameshifted;gbkey=CDS;gene=rbbA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312386.2;locus_tag=J4731_25880;product=ribosome-associated ATPase/putative transporter RbbA;pseudo=true;transl_table=11
JAGETS010000127.1	Genbank	pseudogene	21466	22500	.	-	.	ID=gene-J4731_25885;Name=J4731_25885;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_25885;pseudo=true
JAGETS010000127.1	Protein Homology	CDS	21466	22500	.	-	0	ID=cds-J4731_25885;Parent=gene-J4731_25885;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013366756.1;locus_tag=J4731_25885;product=HlyD family efflux transporter periplasmic adaptor subunit;pseudo=true;transl_table=11
JAGETS010000127.1	Genbank	pseudogene	22900	23372	.	-	.	ID=gene-J4731_25890;Name=J4731_25890;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_25890;pseudo=true
JAGETS010000127.1	Protein Homology	CDS	22900	23372	.	-	0	ID=cds-J4731_25890;Parent=gene-J4731_25890;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012773403.1;locus_tag=J4731_25890;product=GNAT family N-acetyltransferase;pseudo=true;transl_table=11
JAGETS010000127.1	Genbank	pseudogene	23784	25506	.	+	.	ID=gene-J4731_25895;Name=J4731_25895;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_25895;pseudo=true
JAGETS010000127.1	Protein Homology	CDS	23784	25506	.	+	0	ID=cds-J4731_25895;Parent=gene-J4731_25895;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006813067.1;locus_tag=J4731_25895;product=ABC-F family ATP-binding cassette domain-containing protein;pseudo=true;transl_table=11
JAGETS010000127.1	Genbank	pseudogene	25934	26474	.	-	.	ID=gene-J4731_25900;Name=J4731_25900;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_25900;pseudo=true
JAGETS010000127.1	Protein Homology	CDS	25934	26474	.	-	0	ID=cds-J4731_25900;Parent=gene-J4731_25900;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004254808.1;locus_tag=J4731_25900;product=helix-turn-helix transcriptional regulator;pseudo=true;transl_table=11
JAGETS010000127.1	Genbank	pseudogene	26761	27887	.	-	.	ID=gene-J4731_25905;Name=tyrP;gbkey=Gene;gene=tyrP;gene_biotype=pseudogene;locus_tag=J4731_25905;pseudo=true
JAGETS010000127.1	Protein Homology	CDS	26761	27887	.	-	0	ID=cds-J4731_25905;Parent=gene-J4731_25905;Note=frameshifted%3B internal stop;gbkey=CDS;gene=tyrP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002221775.1;locus_tag=J4731_25905;product=tyrosine transporter TyrP;pseudo=true;transl_table=11
JAGETS010000127.1	Genbank	gene	28100	28555	.	-	.	ID=gene-J4731_25910;Name=J4731_25910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_25910
JAGETS010000127.1	GeneMarkS-2+	CDS	28100	28555	.	-	0	ID=cds-MBO1930026.1;Parent=gene-J4731_25910;Dbxref=NCBI_GP:MBO1930026.1;Name=MBO1930026.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_25910;product=hypothetical protein;protein_id=MBO1930026.1;transl_table=11
JAGETS010000127.1	Genbank	gene	28498	28944	.	-	.	ID=gene-J4731_25915;Name=J4731_25915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_25915
JAGETS010000127.1	Protein Homology	CDS	28498	28944	.	-	0	ID=cds-MBO1930027.1;Parent=gene-J4731_25915;Dbxref=NCBI_GP:MBO1930027.1;Name=MBO1930027.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012503.1;locus_tag=J4731_25915;product=hypothetical protein;protein_id=MBO1930027.1;transl_table=11
JAGETS010000127.1	Genbank	gene	29021	29641	.	-	.	ID=gene-J4731_25920;Name=J4731_25920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_25920
JAGETS010000127.1	GeneMarkS-2+	CDS	29021	29641	.	-	0	ID=cds-MBO1930028.1;Parent=gene-J4731_25920;Dbxref=NCBI_GP:MBO1930028.1;Name=MBO1930028.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_25920;product=hypothetical protein;protein_id=MBO1930028.1;transl_table=11
JAGETS010000127.1	Genbank	pseudogene	30298	31301	.	-	.	ID=gene-J4731_25925;Name=J4731_25925;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_25925;pseudo=true
JAGETS010000127.1	Protein Homology	CDS	30298	31301	.	-	0	ID=cds-J4731_25925;Parent=gene-J4731_25925;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004254816.1;locus_tag=J4731_25925;product=NAD(P)H-quinone oxidoreductase;pseudo=true;transl_table=11
JAGETS010000127.1	Genbank	pseudogene	31651	32413	.	+	.	ID=gene-J4731_25930;Name=J4731_25930;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_25930;pseudo=true
JAGETS010000127.1	Protein Homology	CDS	31651	32413	.	+	0	ID=cds-J4731_25930;Parent=gene-J4731_25930;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004919586.1;locus_tag=J4731_25930;product=FNR family transcription factor;pseudo=true;transl_table=11
JAGETS010000127.1	Genbank	pseudogene	32535	33469	.	+	.	ID=gene-J4731_25935;Name=uspE;gbkey=Gene;gene=uspE;gene_biotype=pseudogene;locus_tag=J4731_25935;pseudo=true
JAGETS010000127.1	Protein Homology	CDS	32535	33469	.	+	0	ID=cds-J4731_25935;Parent=gene-J4731_25935;Note=frameshifted;gbkey=CDS;gene=uspE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004248016.1;locus_tag=J4731_25935;product=universal stress protein UspE;pseudo=true;transl_table=11
JAGETS010000127.1	Genbank	gene	33517	33720	.	-	.	ID=gene-J4731_25940;Name=J4731_25940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_25940
JAGETS010000127.1	GeneMarkS-2+	CDS	33517	33720	.	-	0	ID=cds-MBO1930029.1;Parent=gene-J4731_25940;Dbxref=NCBI_GP:MBO1930029.1;Name=MBO1930029.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_25940;product=hypothetical protein;protein_id=MBO1930029.1;transl_table=11
JAGETS010000127.1	Genbank	gene	33877	34146	.	-	.	ID=gene-J4731_25945;Name=J4731_25945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_25945
JAGETS010000127.1	Protein Homology	CDS	33877	34146	.	-	0	ID=cds-MBO1930030.1;Parent=gene-J4731_25945;Dbxref=NCBI_GP:MBO1930030.1;Name=MBO1930030.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012655.1;locus_tag=J4731_25945;product=TetR/AcrR family transcriptional regulator;protein_id=MBO1930030.1;transl_table=11
JAGETS010000127.1	Genbank	gene	34415	34687	.	+	.	ID=gene-J4731_25950;Name=J4731_25950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_25950
JAGETS010000127.1	Protein Homology	CDS	34415	34687	.	+	0	ID=cds-MBO1930031.1;Parent=gene-J4731_25950;Dbxref=NCBI_GP:MBO1930031.1;Name=MBO1930031.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019310.1;locus_tag=J4731_25950;product=MFS transporter;protein_id=MBO1930031.1;transl_table=11
JAGETS010000127.1	Genbank	gene	34808	34972	.	+	.	ID=gene-J4731_25955;Name=J4731_25955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_25955
JAGETS010000127.1	GeneMarkS-2+	CDS	34808	34972	.	+	0	ID=cds-MBO1930032.1;Parent=gene-J4731_25955;Dbxref=NCBI_GP:MBO1930032.1;Name=MBO1930032.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_25955;product=hypothetical protein;protein_id=MBO1930032.1;transl_table=11
JAGETS010000127.1	Genbank	gene	35008	35160	.	+	.	ID=gene-J4731_25960;Name=J4731_25960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_25960
JAGETS010000127.1	GeneMarkS-2+	CDS	35008	35160	.	+	0	ID=cds-MBO1930033.1;Parent=gene-J4731_25960;Dbxref=NCBI_GP:MBO1930033.1;Name=MBO1930033.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_25960;product=hypothetical protein;protein_id=MBO1930033.1;transl_table=11
JAGETS010000127.1	Genbank	pseudogene	35625	36999	.	-	.	ID=gene-J4731_25965;Name=pntB;gbkey=Gene;gene=pntB;gene_biotype=pseudogene;locus_tag=J4731_25965;pseudo=true
JAGETS010000127.1	Protein Homology	CDS	35625	36999	.	-	0	ID=cds-J4731_25965;Parent=gene-J4731_25965;Note=frameshifted;gbkey=CDS;gene=pntB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000014033.1;locus_tag=J4731_25965;product=Re/Si-specific NAD(P)(+) transhydrogenase subunit beta;pseudo=true;transl_table=11
JAGETS010000127.1	Genbank	pseudogene	37013	38531	.	-	.	ID=gene-J4731_25970;Name=pntA;gbkey=Gene;gene=pntA;gene_biotype=pseudogene;locus_tag=J4731_25970;pseudo=true
JAGETS010000127.1	Protein Homology	CDS	37013	38531	.	-	0	ID=cds-J4731_25970;Parent=gene-J4731_25970;Note=frameshifted;gbkey=CDS;gene=pntA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004237540.1;locus_tag=J4731_25970;product=Re/Si-specific NAD(P)(+) transhydrogenase subunit alpha;pseudo=true;transl_table=11
JAGETS010000127.1	Genbank	pseudogene	38908	39847	.	+	.	ID=gene-J4731_25975;Name=J4731_25975;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_25975;pseudo=true
JAGETS010000127.1	Protein Homology	CDS	38908	39847	.	+	0	ID=cds-J4731_25975;Parent=gene-J4731_25975;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004119625.1;locus_tag=J4731_25975;product=DUF1471 domain-containing protein;pseudo=true;transl_table=11
JAGETS010000127.1	Genbank	pseudogene	40145	41450	.	+	.	ID=gene-J4731_25980;Name=J4731_25980;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_25980;pseudo=true
JAGETS010000127.1	Protein Homology	CDS	40145	41450	.	+	0	ID=cds-J4731_25980;Parent=gene-J4731_25980;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003836385.1;locus_tag=J4731_25980;product=amino acid permease;pseudo=true;transl_table=11
JAGETS010000127.1	Genbank	pseudogene	41799	45619	.	-	.	ID=gene-J4731_25985;Name=hrpA;gbkey=Gene;gene=hrpA;gene_biotype=pseudogene;locus_tag=J4731_25985;pseudo=true
JAGETS010000127.1	Protein Homology	CDS	41799	45619	.	-	0	ID=cds-J4731_25985;Parent=gene-J4731_25985;Note=frameshifted%3B internal stop;gbkey=CDS;gene=hrpA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002462183.1;locus_tag=J4731_25985;product=ATP-dependent RNA helicase HrpA;pseudo=true;transl_table=11
JAGETS010000127.1	Genbank	gene	45892	46473	.	+	.	ID=gene-J4731_25990;Name=J4731_25990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_25990
JAGETS010000127.1	Protein Homology	CDS	45892	46473	.	+	0	ID=cds-MBO1930034.1;Parent=gene-J4731_25990;Dbxref=NCBI_GP:MBO1930034.1;Name=MBO1930034.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007761677.1;locus_tag=J4731_25990;product=FMN-dependent NADH-azoreductase;protein_id=MBO1930034.1;transl_table=11
JAGETS010000127.1	Genbank	gene	46886	47077	.	-	.	ID=gene-J4731_25995;Name=J4731_25995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_25995
JAGETS010000127.1	Protein Homology	CDS	46886	47077	.	-	0	ID=cds-MBO1930035.1;Parent=gene-J4731_25995;Dbxref=NCBI_GP:MBO1930035.1;Name=MBO1930035.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006661806.1;locus_tag=J4731_25995;product=YnbE family lipoprotein;protein_id=MBO1930035.1;transl_table=11
JAGETS010000127.1	Genbank	pseudogene	47106	49617	.	-	.	ID=gene-J4731_26000;Name=J4731_26000;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_26000;pseudo=true
JAGETS010000127.1	Protein Homology	CDS	47106	49617	.	-	0	ID=cds-J4731_26000;Parent=gene-J4731_26000;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004919551.1;locus_tag=J4731_26000;product=YdbH family protein;pseudo=true;transl_table=11
JAGETS010000127.1	Genbank	pseudogene	49870	50867	.	+	.	ID=gene-J4731_26005;Name=J4731_26005;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_26005;pseudo=true
JAGETS010000127.1	Protein Homology	CDS	49870	50867	.	+	0	ID=cds-J4731_26005;Parent=gene-J4731_26005;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015377997.1;locus_tag=J4731_26005;product=2-hydroxyacid dehydrogenase;pseudo=true;transl_table=11
JAGETS010000127.1	Genbank	pseudogene	50882	51315	.	+	.	ID=gene-J4731_26010;Name=J4731_26010;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_26010;pseudo=true
JAGETS010000127.1	Protein Homology	CDS	50882	51315	.	+	0	ID=cds-J4731_26010;Parent=gene-J4731_26010;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004254875.1;locus_tag=J4731_26010;product=META domain-containing protein;pseudo=true;transl_table=11
JAGETS010000127.1	Genbank	pseudogene	51393	52026	.	-	.	ID=gene-J4731_26015;Name=grxB;gbkey=Gene;gene=grxB;gene_biotype=pseudogene;locus_tag=J4731_26015;pseudo=true
JAGETS010000127.1	Protein Homology	CDS	51393	52026	.	-	0	ID=cds-J4731_26015;Parent=gene-J4731_26015;Note=frameshifted;gbkey=CDS;gene=grxB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006661810.1;locus_tag=J4731_26015;product=glutaredoxin 2;pseudo=true;transl_table=11
JAGETS010000127.1	Genbank	pseudogene	52713	53008	.	+	.	ID=gene-J4731_26020;Name=J4731_26020;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_26020;pseudo=true
JAGETS010000127.1	Protein Homology	CDS	52713	53008	.	+	0	ID=cds-J4731_26020;Parent=gene-J4731_26020;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006659897.1;locus_tag=J4731_26020;product=helix-turn-helix transcriptional regulator;pseudo=true;transl_table=11
JAGETS010000127.1	Genbank	gene	53456	53692	.	-	.	ID=gene-J4731_26025;Name=J4731_26025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_26025
JAGETS010000127.1	GeneMarkS-2+	CDS	53456	53692	.	-	0	ID=cds-MBO1930036.1;Parent=gene-J4731_26025;Dbxref=NCBI_GP:MBO1930036.1;Name=MBO1930036.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_26025;product=type 1 fimbrial protein;protein_id=MBO1930036.1;transl_table=11
JAGETS010000127.1	Genbank	pseudogene	54184	56634	.	-	.	ID=gene-J4731_26030;Name=J4731_26030;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_26030;pseudo=true
JAGETS010000127.1	Protein Homology	CDS	54184	56634	.	-	0	ID=cds-J4731_26030;Parent=gene-J4731_26030;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004254888.1;locus_tag=J4731_26030;product=fimbrial biogenesis outer membrane usher protein;pseudo=true;transl_table=11
JAGETS010000127.1	Genbank	pseudogene	56644	57341	.	-	.	ID=gene-J4731_26035;Name=J4731_26035;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_26035;pseudo=true
JAGETS010000127.1	Protein Homology	CDS	56644	57341	.	-	0	ID=cds-J4731_26035;Parent=gene-J4731_26035;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004211921.1;locus_tag=J4731_26035;product=fimbria/pilus periplasmic chaperone;pseudo=true;transl_table=11
JAGETS010000127.1	Genbank	pseudogene	57460	58080	.	-	.	ID=gene-J4731_26040;Name=J4731_26040;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_26040;pseudo=true
JAGETS010000127.1	Protein Homology	CDS	57460	58080	.	-	0	ID=cds-J4731_26040;Parent=gene-J4731_26040;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002916128.1;locus_tag=J4731_26040;product=type 1 fimbrial protein;pseudo=true;transl_table=11
JAGETS010000127.1	Genbank	pseudogene	59639	59881	.	-	.	ID=gene-J4731_26045;Name=J4731_26045;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_26045;pseudo=true
JAGETS010000127.1	Protein Homology	CDS	59639	59881	.	-	0	ID=cds-J4731_26045;Parent=gene-J4731_26045;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004254920.1;locus_tag=J4731_26045;product=DUF333 domain-containing protein;pseudo=true;transl_table=11
JAGETS010000127.1	Genbank	gene	60187	60402	.	-	.	ID=gene-J4731_26050;Name=J4731_26050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_26050
JAGETS010000127.1	Protein Homology	CDS	60187	60402	.	-	0	ID=cds-MBO1930037.1;Parent=gene-J4731_26050;Dbxref=NCBI_GP:MBO1930037.1;Name=MBO1930037.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004254924.1;locus_tag=J4731_26050;product=hypothetical protein;protein_id=MBO1930037.1;transl_table=11
JAGETS010000127.1	Genbank	pseudogene	60866	61305	.	-	.	ID=gene-J4731_26055;Name=J4731_26055;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_26055;pseudo=true
JAGETS010000127.1	Protein Homology	CDS	60866	61305	.	-	0	ID=cds-J4731_26055;Parent=gene-J4731_26055;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006536635.1;locus_tag=J4731_26055;product=YcgN family cysteine cluster protein;pseudo=true;transl_table=11
JAGETS010000127.1	Genbank	pseudogene	61354	61970	.	-	.	ID=gene-J4731_26060;Name=J4731_26060;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_26060;pseudo=true
JAGETS010000127.1	Protein Homology	CDS	61354	61970	.	-	0	ID=cds-J4731_26060;Parent=gene-J4731_26060;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003859945.1;locus_tag=J4731_26060;product=fumarylacetoacetate hydrolase family protein;pseudo=true;transl_table=11
JAGETS010000127.1	Genbank	pseudogene	61990	63067	.	-	.	ID=gene-J4731_26065;Name=J4731_26065;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_26065;pseudo=true
JAGETS010000127.1	Protein Homology	CDS	61990	63067	.	-	0	ID=cds-J4731_26065;Parent=gene-J4731_26065;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006659906.1;locus_tag=J4731_26065;product=lytic murein transglycosylase;pseudo=true;transl_table=11
JAGETS010000127.1	Genbank	pseudogene	63116	63383	.	-	.	ID=gene-J4731_26070;Name=J4731_26070;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_26070;pseudo=true
JAGETS010000127.1	Protein Homology	CDS	63116	63383	.	-	0	ID=cds-J4731_26070;Parent=gene-J4731_26070;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006661816.1;locus_tag=J4731_26070;product=YcgL domain-containing protein;pseudo=true;transl_table=11
JAGETS010000127.1	Genbank	pseudogene	63513	64204	.	+	.	ID=gene-J4731_26075;Name=minC;gbkey=Gene;gene=minC;gene_biotype=pseudogene;locus_tag=J4731_26075;pseudo=true
JAGETS010000127.1	Protein Homology	CDS	63513	64204	.	+	0	ID=cds-J4731_26075;Parent=gene-J4731_26075;Note=frameshifted%3B internal stop;gbkey=CDS;gene=minC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006659908.1;locus_tag=J4731_26075;product=septum site-determining protein MinC;pseudo=true;transl_table=11
JAGETS010000127.1	Genbank	pseudogene	64228	65039	.	+	.	ID=gene-J4731_26080;Name=minD;gbkey=Gene;gene=minD;gene_biotype=pseudogene;locus_tag=J4731_26080;pseudo=true
JAGETS010000127.1	Protein Homology	CDS	64228	65039	.	+	0	ID=cds-J4731_26080;Parent=gene-J4731_26080;Note=frameshifted;gbkey=CDS;gene=minD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013358081.1;locus_tag=J4731_26080;product=septum site-determining protein MinD;pseudo=true;transl_table=11
JAGETS010000127.1	Genbank	pseudogene	65039	65380	.	+	.	ID=gene-J4731_26085;Name=minE;gbkey=Gene;gene=minE;gene_biotype=pseudogene;locus_tag=J4731_26085;pseudo=true
JAGETS010000127.1	Protein Homology	CDS	65039	65380	.	+	0	ID=cds-J4731_26085;Parent=gene-J4731_26085;Note=frameshifted;gbkey=CDS;gene=minE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004254951.1;locus_tag=J4731_26085;product=cell division topological specificity factor MinE;pseudo=true;transl_table=11
JAGETS010000127.1	Genbank	gene	65460	65570	.	-	.	ID=gene-J4731_26090;Name=J4731_26090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_26090
JAGETS010000127.1	Protein Homology	CDS	65460	65570	.	-	0	ID=cds-MBO1930038.1;Parent=gene-J4731_26090;Dbxref=NCBI_GP:MBO1930038.1;Name=MBO1930038.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR01352.1;locus_tag=J4731_26090;product=energy transducer TonB;protein_id=MBO1930038.1;transl_table=11
JAGETS010000127.1	Genbank	gene	65554	65712	.	-	.	ID=gene-J4731_26095;Name=J4731_26095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_26095
JAGETS010000127.1	Protein Homology	CDS	65554	65712	.	-	0	ID=cds-MBO1930039.1;Parent=gene-J4731_26095;Dbxref=NCBI_GP:MBO1930039.1;Name=MBO1930039.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015506.1;locus_tag=J4731_26095;product=energy transducer TonB;protein_id=MBO1930039.1;transl_table=11
JAGETS010000127.1	Genbank	pseudogene	66252	69241	.	-	.	ID=gene-J4731_26100;Name=J4731_26100;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_26100;pseudo=true
JAGETS010000127.1	Protein Homology	CDS	66252	69241	.	-	0	ID=cds-J4731_26100;Parent=gene-J4731_26100;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014658157.1;locus_tag=J4731_26100;product=TonB-dependent receptor;pseudo=true;transl_table=11
JAGETS010000127.1	Genbank	gene	69514	69867	.	-	.	ID=gene-J4731_26105;Name=J4731_26105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_26105
JAGETS010000127.1	Protein Homology	CDS	69514	69867	.	-	0	ID=cds-MBO1930040.1;Parent=gene-J4731_26105;Dbxref=NCBI_GP:MBO1930040.1;Name=MBO1930040.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016462.1;locus_tag=J4731_26105;product=DUF560 domain-containing protein;protein_id=MBO1930040.1;transl_table=11
JAGETS010000127.1	Genbank	gene	69920	70285	.	-	.	ID=gene-J4731_26110;Name=J4731_26110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_26110
JAGETS010000127.1	GeneMarkS-2+	CDS	69920	70285	.	-	0	ID=cds-MBO1930041.1;Parent=gene-J4731_26110;Dbxref=NCBI_GP:MBO1930041.1;Name=MBO1930041.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_26110;product=hypothetical protein;protein_id=MBO1930041.1;transl_table=11
JAGETS010000127.1	Genbank	pseudogene	70743	71475	.	-	.	ID=gene-J4731_26115;Name=J4731_26115;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_26115;pseudo=true
JAGETS010000127.1	Protein Homology	CDS	70743	71475	.	-	0	ID=cds-J4731_26115;Parent=gene-J4731_26115;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004254961.1;locus_tag=J4731_26115;product=transferrin-binding protein-like solute binding protein;pseudo=true;transl_table=11
JAGETS010000127.1	Genbank	pseudogene	71917	73028	.	-	.	ID=gene-J4731_26120;Name=rnd;gbkey=Gene;gene=rnd;gene_biotype=pseudogene;locus_tag=J4731_26120;pseudo=true
JAGETS010000127.1	Protein Homology	CDS	71917	73028	.	-	0	ID=cds-J4731_26120;Parent=gene-J4731_26120;Note=frameshifted;gbkey=CDS;gene=rnd;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013575322.1;locus_tag=J4731_26120;product=ribonuclease D;pseudo=true;transl_table=11
JAGETS010000127.1	Genbank	pseudogene	73085	74378	.	-	.	ID=gene-J4731_26125;Name=J4731_26125;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_26125;pseudo=true
JAGETS010000127.1	Protein Homology	CDS	73085	74378	.	-	1	ID=cds-J4731_26125;Parent=gene-J4731_26125;Note=frameshifted%3B internal stop%3B incomplete%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012988686.1;locus_tag=J4731_26125;product=AMP-binding protein;pseudo=true;transl_table=11
##sequence-region JAGETS010000128.1 1 3714
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=587
JAGETS010000128.1	Genbank	region	1	3714	.	+	.	ID=JAGETS010000128.1:1..3714;Dbxref=taxon:587;collected-by=NHLS;collection-date=2018;country=South Africa: Pretoria;gbkey=Src;isolation-source=stool;lat-lon=25.7479 S 28.2293 E;mol_type=genomic DNA;nat-host=porcine;strain=SG003
JAGETS010000128.1	Genbank	pseudogene	63	744	.	-	.	ID=gene-J4731_26130;Name=J4731_26130;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_26130;pseudo=true
JAGETS010000128.1	Protein Homology	CDS	63	744	.	-	0	ID=cds-J4731_26130;Parent=gene-J4731_26130;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004254961.1;locus_tag=J4731_26130;product=transferrin-binding protein-like solute binding protein;pseudo=true;transl_table=11
JAGETS010000128.1	Genbank	pseudogene	1241	2349	.	-	.	ID=gene-J4731_26135;Name=rnd;gbkey=Gene;gene=rnd;gene_biotype=pseudogene;locus_tag=J4731_26135;pseudo=true
JAGETS010000128.1	Protein Homology	CDS	1241	2349	.	-	0	ID=cds-J4731_26135;Parent=gene-J4731_26135;Note=frameshifted;gbkey=CDS;gene=rnd;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004254964.1;locus_tag=J4731_26135;product=ribonuclease D;pseudo=true;transl_table=11
JAGETS010000128.1	Genbank	pseudogene	2405	3714	.	-	.	ID=gene-J4731_26140;Name=J4731_26140;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_26140;pseudo=true
JAGETS010000128.1	Protein Homology	CDS	2405	3714	.	-	1	ID=cds-J4731_26140;Parent=gene-J4731_26140;Note=frameshifted%3B incomplete%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012988686.1;locus_tag=J4731_26140;product=AMP-binding protein;pseudo=true;transl_table=11
##sequence-region JAGETS010000129.1 1 5636
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=587
JAGETS010000129.1	Genbank	region	1	5636	.	+	.	ID=JAGETS010000129.1:1..5636;Dbxref=taxon:587;collected-by=NHLS;collection-date=2018;country=South Africa: Pretoria;gbkey=Src;isolation-source=stool;lat-lon=25.7479 S 28.2293 E;mol_type=genomic DNA;nat-host=porcine;strain=SG003
JAGETS010000129.1	Genbank	pseudogene	217	955	.	-	.	ID=gene-J4731_26145;Name=J4731_26145;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_26145;pseudo=true
JAGETS010000129.1	Protein Homology	CDS	217	955	.	-	0	ID=cds-J4731_26145;Parent=gene-J4731_26145;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004254961.1;locus_tag=J4731_26145;product=transferrin-binding protein-like solute binding protein;pseudo=true;transl_table=11
JAGETS010000129.1	Genbank	pseudogene	1352	2496	.	-	.	ID=gene-J4731_26150;Name=rnd;gbkey=Gene;gene=rnd;gene_biotype=pseudogene;locus_tag=J4731_26150;pseudo=true
JAGETS010000129.1	Protein Homology	CDS	1352	2496	.	-	0	ID=cds-J4731_26150;Parent=gene-J4731_26150;Note=frameshifted%3B internal stop;gbkey=CDS;gene=rnd;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008813322.1;locus_tag=J4731_26150;product=ribonuclease D;pseudo=true;transl_table=11
JAGETS010000129.1	Genbank	pseudogene	2617	4215	.	-	.	ID=gene-J4731_26155;Name=J4731_26155;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_26155;pseudo=true
JAGETS010000129.1	Protein Homology	CDS	2617	4215	.	-	0	ID=cds-J4731_26155;Parent=gene-J4731_26155;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006659916.1;locus_tag=J4731_26155;product=AMP-binding protein;pseudo=true;transl_table=11
JAGETS010000129.1	Genbank	pseudogene	4627	5204	.	-	.	ID=gene-J4731_26160;Name=J4731_26160;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_26160;pseudo=true
JAGETS010000129.1	Protein Homology	CDS	4627	5204	.	-	0	ID=cds-J4731_26160;Parent=gene-J4731_26160;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004254971.1;locus_tag=J4731_26160;product=Slp family lipoprotein;pseudo=true;transl_table=11
JAGETS010000129.1	Genbank	gene	5416	5598	.	-	.	ID=gene-J4731_26165;Name=J4731_26165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_26165
JAGETS010000129.1	GeneMarkS-2+	CDS	5416	5598	.	-	0	ID=cds-MBO1930042.1;Parent=gene-J4731_26165;Dbxref=NCBI_GP:MBO1930042.1;Name=MBO1930042.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_26165;product=hypothetical protein;protein_id=MBO1930042.1;transl_table=11
##sequence-region JAGETS010000013.1 1 42749
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=587
JAGETS010000013.1	Genbank	region	1	42749	.	+	.	ID=JAGETS010000013.1:1..42749;Dbxref=taxon:587;collected-by=NHLS;collection-date=2018;country=South Africa: Pretoria;gbkey=Src;isolation-source=stool;lat-lon=25.7479 S 28.2293 E;mol_type=genomic DNA;nat-host=porcine;strain=SG003
JAGETS010000013.1	Genbank	gene	165	359	.	+	.	ID=gene-J4731_06985;Name=J4731_06985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_06985
JAGETS010000013.1	GeneMarkS-2+	CDS	165	359	.	+	0	ID=cds-MBO1928991.1;Parent=gene-J4731_06985;Dbxref=NCBI_GP:MBO1928991.1;Name=MBO1928991.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_06985;product=hypothetical protein;protein_id=MBO1928991.1;transl_table=11
JAGETS010000013.1	Genbank	gene	338	526	.	+	.	ID=gene-J4731_06990;Name=J4731_06990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_06990
JAGETS010000013.1	Protein Homology	CDS	338	526	.	+	0	ID=cds-MBO1928992.1;Parent=gene-J4731_06990;Dbxref=NCBI_GP:MBO1928992.1;Name=MBO1928992.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014385.1;locus_tag=J4731_06990;product=TolC family protein;protein_id=MBO1928992.1;transl_table=11
JAGETS010000013.1	Genbank	gene	555	803	.	+	.	ID=gene-J4731_06995;Name=J4731_06995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_06995
JAGETS010000013.1	Protein Homology	CDS	555	803	.	+	0	ID=cds-MBO1928993.1;Parent=gene-J4731_06995;Dbxref=NCBI_GP:MBO1928993.1;Name=MBO1928993.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014385.1;locus_tag=J4731_06995;product=hypothetical protein;protein_id=MBO1928993.1;transl_table=11
JAGETS010000013.1	Genbank	gene	835	1305	.	+	.	ID=gene-J4731_07000;Name=J4731_07000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_07000
JAGETS010000013.1	Protein Homology	CDS	835	1305	.	+	0	ID=cds-MBO1928994.1;Parent=gene-J4731_07000;Dbxref=NCBI_GP:MBO1928994.1;Name=MBO1928994.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017760.1;locus_tag=J4731_07000;product=MFS transporter;protein_id=MBO1928994.1;transl_table=11
JAGETS010000013.1	Genbank	gene	1302	2105	.	+	.	ID=gene-J4731_07005;Name=J4731_07005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_07005
JAGETS010000013.1	Protein Homology	CDS	1302	2105	.	+	0	ID=cds-MBO1928995.1;Parent=gene-J4731_07005;Dbxref=NCBI_GP:MBO1928995.1;Name=MBO1928995.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017760.1;locus_tag=J4731_07005;product=MFS transporter;protein_id=MBO1928995.1;transl_table=11
JAGETS010000013.1	Genbank	gene	2380	2520	.	+	.	ID=gene-J4731_07010;Name=J4731_07010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_07010
JAGETS010000013.1	GeneMarkS-2+	CDS	2380	2520	.	+	0	ID=cds-MBO1928996.1;Parent=gene-J4731_07010;Dbxref=NCBI_GP:MBO1928996.1;Name=MBO1928996.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_07010;product=hypothetical protein;protein_id=MBO1928996.1;transl_table=11
JAGETS010000013.1	Genbank	pseudogene	3341	4419	.	+	.	ID=gene-J4731_07015;Name=wecA;gbkey=Gene;gene=wecA;gene_biotype=pseudogene;locus_tag=J4731_07015;pseudo=true
JAGETS010000013.1	Protein Homology	CDS	3341	4419	.	+	0	ID=cds-J4731_07015;Parent=gene-J4731_07015;Note=frameshifted;gbkey=CDS;gene=wecA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008912187.1;locus_tag=J4731_07015;product=UDP-N-acetylglucosamine--undecaprenyl-phosphate N-acetylglucosaminephosphotransferase;pseudo=true;transl_table=11
JAGETS010000013.1	Genbank	pseudogene	4449	5499	.	+	.	ID=gene-J4731_07020;Name=wzzE;gbkey=Gene;gene=wzzE;gene_biotype=pseudogene;locus_tag=J4731_07020;pseudo=true
JAGETS010000013.1	Protein Homology	CDS	4449	5499	.	+	0	ID=cds-J4731_07020;Parent=gene-J4731_07020;Note=frameshifted%3B internal stop;gbkey=CDS;gene=wzzE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004906105.1;locus_tag=J4731_07020;product=ECA polysaccharide chain length modulation protein;pseudo=true;transl_table=11
JAGETS010000013.1	Genbank	pseudogene	5599	6722	.	+	.	ID=gene-J4731_07025;Name=wecB;gbkey=Gene;gene=wecB;gene_biotype=pseudogene;locus_tag=J4731_07025;pseudo=true
JAGETS010000013.1	Protein Homology	CDS	5599	6722	.	+	0	ID=cds-J4731_07025;Parent=gene-J4731_07025;Note=frameshifted%3B internal stop;gbkey=CDS;gene=wecB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026253.1;locus_tag=J4731_07025;product=UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing);pseudo=true;transl_table=11
JAGETS010000013.1	Genbank	pseudogene	6719	7044	.	+	.	ID=gene-J4731_07030;Name=J4731_07030;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_07030;pseudo=true
JAGETS010000013.1	Protein Homology	CDS	6719	7044	.	+	0	ID=cds-J4731_07030;Parent=gene-J4731_07030;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006535831.1;locus_tag=J4731_07030;product=UDP-N-acetyl-D-mannosamine dehydrogenase;pseudo=true;transl_table=11
JAGETS010000013.1	Genbank	gene	7013	7300	.	+	.	ID=gene-J4731_07035;Name=J4731_07035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_07035
JAGETS010000013.1	Protein Homology	CDS	7013	7300	.	+	0	ID=cds-MBO1928997.1;Parent=gene-J4731_07035;Dbxref=NCBI_GP:MBO1928997.1;Name=MBO1928997.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015666.1;locus_tag=J4731_07035;product=hypothetical protein;protein_id=MBO1928997.1;transl_table=11
JAGETS010000013.1	Genbank	gene	7338	7580	.	+	.	ID=gene-J4731_07040;Name=J4731_07040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_07040
JAGETS010000013.1	Protein Homology	CDS	7338	7580	.	+	0	ID=cds-MBO1928998.1;Parent=gene-J4731_07040;Dbxref=NCBI_GP:MBO1928998.1;Name=MBO1928998.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013175.1;locus_tag=J4731_07040;product=hypothetical protein;protein_id=MBO1928998.1;transl_table=11
JAGETS010000013.1	Genbank	gene	7669	8034	.	+	.	ID=gene-J4731_07045;Name=J4731_07045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_07045
JAGETS010000013.1	Protein Homology	CDS	7669	8034	.	+	0	ID=cds-MBO1928999.1;Parent=gene-J4731_07045;Dbxref=NCBI_GP:MBO1928999.1;Name=MBO1928999.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015665.1;locus_tag=J4731_07045;product=hypothetical protein;protein_id=MBO1928999.1;transl_table=11
JAGETS010000013.1	Genbank	pseudogene	7967	9025	.	+	.	ID=gene-J4731_07050;Name=rffG;gbkey=Gene;gene=rffG;gene_biotype=pseudogene;locus_tag=J4731_07050;pseudo=true
JAGETS010000013.1	Protein Homology	CDS	7967	9025	.	+	0	ID=cds-J4731_07050;Parent=gene-J4731_07050;Note=frameshifted;gbkey=CDS;gene=rffG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011191500.1;locus_tag=J4731_07050;product=dTDP-glucose 4%2C6-dehydratase;pseudo=true;transl_table=11
JAGETS010000013.1	Genbank	pseudogene	9034	9911	.	+	.	ID=gene-J4731_07055;Name=rfbA;gbkey=Gene;gene=rfbA;gene_biotype=pseudogene;locus_tag=J4731_07055;pseudo=true
JAGETS010000013.1	Protein Homology	CDS	9034	9911	.	+	0	ID=cds-J4731_07055;Parent=gene-J4731_07055;Note=frameshifted;gbkey=CDS;gene=rfbA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133346.1;locus_tag=J4731_07055;product=glucose-1-phosphate thymidylyltransferase RfbA;pseudo=true;transl_table=11
JAGETS010000013.1	Genbank	pseudogene	9889	10624	.	+	.	ID=gene-J4731_07060;Name=rffC;gbkey=Gene;gene=rffC;gene_biotype=pseudogene;gene_synonym=wecD;locus_tag=J4731_07060;pseudo=true
JAGETS010000013.1	Protein Homology	CDS	9889	10624	.	+	0	ID=cds-J4731_07060;Parent=gene-J4731_07060;Note=frameshifted%3B internal stop;gbkey=CDS;gene=rffC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006662358.1;locus_tag=J4731_07060;product=dTDP-4-amino-4%2C6-dideoxy-D-galactose acyltransferase;pseudo=true;transl_table=11
JAGETS010000013.1	Genbank	pseudogene	10611	11738	.	+	.	ID=gene-J4731_07065;Name=rffA;gbkey=Gene;gene=rffA;gene_biotype=pseudogene;gene_synonym=fcnA,wecE;locus_tag=J4731_07065;pseudo=true
JAGETS010000013.1	Protein Homology	CDS	10611	11738	.	+	0	ID=cds-J4731_07065;Parent=gene-J4731_07065;Note=frameshifted;gbkey=CDS;gene=rffA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013649042.1;locus_tag=J4731_07065;product=dTDP-4-amino-4%2C6-dideoxygalactose transaminase;pseudo=true;transl_table=11
JAGETS010000013.1	Genbank	pseudogene	11738	12983	.	+	.	ID=gene-J4731_07070;Name=wzxE;gbkey=Gene;gene=wzxE;gene_biotype=pseudogene;locus_tag=J4731_07070;pseudo=true
JAGETS010000013.1	Protein Homology	CDS	11738	12983	.	+	0	ID=cds-J4731_07070;Parent=gene-J4731_07070;Note=frameshifted%3B internal stop;gbkey=CDS;gene=wzxE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012990434.1;locus_tag=J4731_07070;product=lipid III flippase WzxE;pseudo=true;transl_table=11
JAGETS010000013.1	Genbank	pseudogene	12980	14059	.	+	.	ID=gene-J4731_07075;Name=J4731_07075;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_07075;pseudo=true
JAGETS010000013.1	Protein Homology	CDS	12980	14059	.	+	0	ID=cds-J4731_07075;Parent=gene-J4731_07075;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008912196.1;locus_tag=J4731_07075;product=TDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase;pseudo=true;transl_table=11
JAGETS010000013.1	Genbank	pseudogene	14056	15398	.	+	.	ID=gene-J4731_07080;Name=wzyE;gbkey=Gene;gene=wzyE;gene_biotype=pseudogene;locus_tag=J4731_07080;pseudo=true
JAGETS010000013.1	Protein Homology	CDS	14056	15398	.	+	0	ID=cds-J4731_07080;Parent=gene-J4731_07080;Note=frameshifted%3B internal stop;gbkey=CDS;gene=wzyE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004906091.1;locus_tag=J4731_07080;product=ECA oligosaccharide polymerase;pseudo=true;transl_table=11
JAGETS010000013.1	Genbank	pseudogene	15525	16170	.	+	.	ID=gene-J4731_07085;Name=rffM;gbkey=Gene;gene=rffM;gene_biotype=pseudogene;locus_tag=J4731_07085;pseudo=true
JAGETS010000013.1	Protein Homology	CDS	15525	16170	.	+	0	ID=cds-J4731_07085;Parent=gene-J4731_07085;Note=frameshifted;gbkey=CDS;gene=rffM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011815335.1;locus_tag=J4731_07085;product=lipopolysaccharide N-acetylmannosaminouronosyltransferase;pseudo=true;transl_table=11
JAGETS010000013.1	Genbank	pseudogene	16459	17824	.	+	.	ID=gene-J4731_07090;Name=J4731_07090;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_07090;pseudo=true
JAGETS010000013.1	Protein Homology	CDS	16459	17824	.	+	0	ID=cds-J4731_07090;Parent=gene-J4731_07090;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004906089.1;locus_tag=J4731_07090;product=amino acid permease;pseudo=true;transl_table=11
JAGETS010000013.1	Genbank	gene	17991	18067	.	+	.	ID=gene-J4731_07095;Name=J4731_07095;gbkey=Gene;gene_biotype=tRNA;locus_tag=J4731_07095
JAGETS010000013.1	tRNAscan-SE	tRNA	17991	18067	.	+	.	ID=rna-J4731_07095;Parent=gene-J4731_07095;anticodon=(pos:18025..18027);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=J4731_07095;product=tRNA-Arg
JAGETS010000013.1	tRNAscan-SE	exon	17991	18067	.	+	.	ID=exon-J4731_07095-1;Parent=rna-J4731_07095;anticodon=(pos:18025..18027);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=J4731_07095;product=tRNA-Arg
JAGETS010000013.1	Genbank	gene	18146	18218	.	+	.	ID=gene-J4731_07100;Name=J4731_07100;gbkey=Gene;gene_biotype=tRNA;locus_tag=J4731_07100
JAGETS010000013.1	tRNAscan-SE	tRNA	18146	18218	.	+	.	ID=rna-J4731_07100;Parent=gene-J4731_07100;anticodon=(pos:18179..18181);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=J4731_07100;product=tRNA-His
JAGETS010000013.1	tRNAscan-SE	exon	18146	18218	.	+	.	ID=exon-J4731_07100-1;Parent=rna-J4731_07100;anticodon=(pos:18179..18181);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=J4731_07100;product=tRNA-His
JAGETS010000013.1	Genbank	gene	18235	18318	.	+	.	ID=gene-J4731_07105;Name=J4731_07105;gbkey=Gene;gene_biotype=tRNA;locus_tag=J4731_07105
JAGETS010000013.1	tRNAscan-SE	tRNA	18235	18318	.	+	.	ID=rna-J4731_07105;Parent=gene-J4731_07105;anticodon=(pos:18269..18271);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=J4731_07105;product=tRNA-Leu
JAGETS010000013.1	tRNAscan-SE	exon	18235	18318	.	+	.	ID=exon-J4731_07105-1;Parent=rna-J4731_07105;anticodon=(pos:18269..18271);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=J4731_07105;product=tRNA-Leu
JAGETS010000013.1	Genbank	gene	18359	18433	.	+	.	ID=gene-J4731_07110;Name=J4731_07110;gbkey=Gene;gene_biotype=tRNA;locus_tag=J4731_07110
JAGETS010000013.1	tRNAscan-SE	tRNA	18359	18433	.	+	.	ID=rna-J4731_07110;Parent=gene-J4731_07110;anticodon=(pos:18393..18395);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=J4731_07110;product=tRNA-Pro
JAGETS010000013.1	tRNAscan-SE	exon	18359	18433	.	+	.	ID=exon-J4731_07110-1;Parent=rna-J4731_07110;anticodon=(pos:18393..18395);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=J4731_07110;product=tRNA-Pro
JAGETS010000013.1	Genbank	pseudogene	19774	20959	.	-	.	ID=gene-J4731_07115;Name=J4731_07115;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_07115;pseudo=true
JAGETS010000013.1	Protein Homology	CDS	19774	20959	.	-	0	ID=cds-J4731_07115;Parent=gene-J4731_07115;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004915525.1;locus_tag=J4731_07115;product=protoheme IX biogenesis protein HemY;pseudo=true;transl_table=11
JAGETS010000013.1	Genbank	pseudogene	20967	22222	.	-	.	ID=gene-J4731_07120;Name=hemX;gbkey=Gene;gene=hemX;gene_biotype=pseudogene;locus_tag=J4731_07120;pseudo=true
JAGETS010000013.1	Protein Homology	CDS	20967	22222	.	-	0	ID=cds-J4731_07120;Parent=gene-J4731_07120;Note=frameshifted;gbkey=CDS;gene=hemX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006658195.1;locus_tag=J4731_07120;product=uroporphyrinogen-III C-methyltransferase;pseudo=true;transl_table=11
JAGETS010000013.1	Genbank	pseudogene	22226	22977	.	-	.	ID=gene-J4731_07125;Name=J4731_07125;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_07125;pseudo=true
JAGETS010000013.1	Protein Homology	CDS	22226	22977	.	-	0	ID=cds-J4731_07125;Parent=gene-J4731_07125;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006658194.1;locus_tag=J4731_07125;product=uroporphyrinogen-III synthase;pseudo=true;transl_table=11
JAGETS010000013.1	Genbank	pseudogene	22974	23907	.	-	.	ID=gene-J4731_07130;Name=hemC;gbkey=Gene;gene=hemC;gene_biotype=pseudogene;locus_tag=J4731_07130;pseudo=true
JAGETS010000013.1	Protein Homology	CDS	22974	23907	.	-	0	ID=cds-J4731_07130;Parent=gene-J4731_07130;Note=frameshifted;gbkey=CDS;gene=hemC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004710128.1;locus_tag=J4731_07130;product=hydroxymethylbilane synthase;pseudo=true;transl_table=11
JAGETS010000013.1	Genbank	pseudogene	24503	27051	.	+	.	ID=gene-J4731_07135;Name=J4731_07135;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_07135;pseudo=true
JAGETS010000013.1	Protein Homology	CDS	24503	27051	.	+	0	ID=cds-J4731_07135;Parent=gene-J4731_07135;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015699130.1;locus_tag=J4731_07135;product=class I adenylate cyclase;pseudo=true;transl_table=11
JAGETS010000013.1	Genbank	gene	27138	27410	.	-	.	ID=gene-J4731_07140;Name=cyaY;gbkey=Gene;gene=cyaY;gene_biotype=protein_coding;locus_tag=J4731_07140
JAGETS010000013.1	Protein Homology	CDS	27138	27410	.	-	0	ID=cds-MBO1929000.1;Parent=gene-J4731_07140;Dbxref=NCBI_GP:MBO1929000.1;Name=MBO1929000.1;gbkey=CDS;gene=cyaY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012990423.1;locus_tag=J4731_07140;product=iron donor protein CyaY;protein_id=MBO1929000.1;transl_table=11
JAGETS010000013.1	Genbank	pseudogene	27850	28661	.	+	.	ID=gene-J4731_07145;Name=dapF;gbkey=Gene;gene=dapF;gene_biotype=pseudogene;locus_tag=J4731_07145;pseudo=true
JAGETS010000013.1	Protein Homology	CDS	27850	28661	.	+	0	ID=cds-J4731_07145;Parent=gene-J4731_07145;Note=frameshifted%3B internal stop;gbkey=CDS;gene=dapF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012368707.1;locus_tag=J4731_07145;product=diaminopimelate epimerase;pseudo=true;transl_table=11
JAGETS010000013.1	Genbank	pseudogene	28711	29385	.	+	.	ID=gene-J4731_07150;Name=J4731_07150;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_07150;pseudo=true
JAGETS010000013.1	Protein Homology	CDS	28711	29385	.	+	0	ID=cds-J4731_07150;Parent=gene-J4731_07150;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003854361.1;locus_tag=J4731_07150;product=DUF484 family protein;pseudo=true;transl_table=11
JAGETS010000013.1	Genbank	pseudogene	29424	30318	.	+	.	ID=gene-J4731_07155;Name=J4731_07155;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_07155;pseudo=true
JAGETS010000013.1	Protein Homology	CDS	29424	30318	.	+	0	ID=cds-J4731_07155;Parent=gene-J4731_07155;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012990419.1;locus_tag=J4731_07155;product=tyrosine-type recombinase/integrase;pseudo=true;transl_table=11
JAGETS010000013.1	Genbank	pseudogene	30272	30985	.	+	.	ID=gene-J4731_07160;Name=yigB;gbkey=Gene;gene=yigB;gene_biotype=pseudogene;locus_tag=J4731_07160;pseudo=true
JAGETS010000013.1	Protein Homology	CDS	30272	30985	.	+	0	ID=cds-J4731_07160;Parent=gene-J4731_07160;Note=frameshifted;gbkey=CDS;gene=yigB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011815342.1;locus_tag=J4731_07160;product=5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB;pseudo=true;transl_table=11
JAGETS010000013.1	Genbank	pseudogene	31071	33224	.	+	.	ID=gene-J4731_07165;Name=uvrD;gbkey=Gene;gene=uvrD;gene_biotype=pseudogene;gene_synonym=mutU,recL;locus_tag=J4731_07165;pseudo=true
JAGETS010000013.1	Protein Homology	CDS	31071	33224	.	+	0	ID=cds-J4731_07165;Parent=gene-J4731_07165;Note=frameshifted;gbkey=CDS;gene=uvrD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008455510.1;locus_tag=J4731_07165;product=DNA helicase II;pseudo=true;transl_table=11
JAGETS010000013.1	Genbank	gene	33751	34080	.	+	.	ID=gene-J4731_07170;Name=J4731_07170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_07170
JAGETS010000013.1	GeneMarkS-2+	CDS	33751	34080	.	+	0	ID=cds-MBO1929001.1;Parent=gene-J4731_07170;Dbxref=NCBI_GP:MBO1929001.1;Name=MBO1929001.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_07170;product=hypothetical protein;protein_id=MBO1929001.1;transl_table=11
JAGETS010000013.1	Genbank	gene	34119	34760	.	+	.	ID=gene-J4731_07175;Name=J4731_07175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_07175
JAGETS010000013.1	GeneMarkS-2+	CDS	34119	34760	.	+	0	ID=cds-MBO1929002.1;Parent=gene-J4731_07175;Dbxref=NCBI_GP:MBO1929002.1;Name=MBO1929002.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_07175;product=hypothetical protein;protein_id=MBO1929002.1;transl_table=11
JAGETS010000013.1	Genbank	pseudogene	35094	35663	.	+	.	ID=gene-J4731_07180;Name=J4731_07180;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_07180;pseudo=true
JAGETS010000013.1	Protein Homology	CDS	35094	35663	.	+	0	ID=cds-J4731_07180;Parent=gene-J4731_07180;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006658182.1;locus_tag=J4731_07180;product=2OG-Fe(II) oxygenase;pseudo=true;transl_table=11
JAGETS010000013.1	Genbank	pseudogene	36181	36817	.	-	.	ID=gene-J4731_07185;Name=J4731_07185;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_07185;pseudo=true
JAGETS010000013.1	Protein Homology	CDS	36181	36817	.	-	0	ID=cds-J4731_07185;Parent=gene-J4731_07185;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004906051.1;locus_tag=J4731_07185;product=peptide chain release factor H;pseudo=true;transl_table=11
JAGETS010000013.1	Genbank	pseudogene	36817	37945	.	-	.	ID=gene-J4731_07190;Name=J4731_07190;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_07190;pseudo=true
JAGETS010000013.1	Protein Homology	CDS	36817	37945	.	-	0	ID=cds-J4731_07190;Parent=gene-J4731_07190;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014657291.1;locus_tag=J4731_07190;product=RNA ligase RtcB family protein;pseudo=true;transl_table=11
JAGETS010000013.1	Genbank	pseudogene	38729	40439	.	-	.	ID=gene-J4731_07195;Name=J4731_07195;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_07195;pseudo=true
JAGETS010000013.1	Protein Homology	CDS	38729	40439	.	-	0	ID=cds-J4731_07195;Parent=gene-J4731_07195;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017373794.1;locus_tag=J4731_07195;product=amidohydrolase;pseudo=true;transl_table=11
JAGETS010000013.1	Genbank	pseudogene	40539	41870	.	-	.	ID=gene-J4731_07200;Name=J4731_07200;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_07200;pseudo=true
JAGETS010000013.1	Protein Homology	CDS	40539	41870	.	-	0	ID=cds-J4731_07200;Parent=gene-J4731_07200;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014657292.1;locus_tag=J4731_07200;product=APC family permease;pseudo=true;transl_table=11
##sequence-region JAGETS010000014.1 1 23342
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=587
JAGETS010000014.1	Genbank	region	1	23342	.	+	.	ID=JAGETS010000014.1:1..23342;Dbxref=taxon:587;collected-by=NHLS;collection-date=2018;country=South Africa: Pretoria;gbkey=Src;isolation-source=stool;lat-lon=25.7479 S 28.2293 E;mol_type=genomic DNA;nat-host=porcine;strain=SG003
JAGETS010000014.1	Genbank	gene	1	558	.	-	.	ID=gene-J4731_07205;Name=J4731_07205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_07205;partial=true;start_range=.,1
JAGETS010000014.1	Protein Homology	CDS	1	558	.	-	0	ID=cds-MBO1929003.1;Parent=gene-J4731_07205;Dbxref=NCBI_GP:MBO1929003.1;Name=MBO1929003.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012786.1%2CHMM:NF025319.1;locus_tag=J4731_07205;partial=true;product=fimbrial biogenesis outer membrane usher protein;protein_id=MBO1929003.1;start_range=.,1;transl_table=11
JAGETS010000014.1	Genbank	gene	555	977	.	-	.	ID=gene-J4731_07210;Name=J4731_07210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_07210
JAGETS010000014.1	Protein Homology	CDS	555	977	.	-	0	ID=cds-MBO1929004.1;Parent=gene-J4731_07210;Dbxref=NCBI_GP:MBO1929004.1;Name=MBO1929004.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012786.1;locus_tag=J4731_07210;product=fimbria/pilus outer membrane usher protein;protein_id=MBO1929004.1;transl_table=11
JAGETS010000014.1	Genbank	gene	947	1132	.	-	.	ID=gene-J4731_07215;Name=J4731_07215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_07215
JAGETS010000014.1	Protein Homology	CDS	947	1132	.	-	0	ID=cds-MBO1929005.1;Parent=gene-J4731_07215;Dbxref=NCBI_GP:MBO1929005.1;Name=MBO1929005.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012786.1;locus_tag=J4731_07215;product=hypothetical protein;protein_id=MBO1929005.1;transl_table=11
JAGETS010000014.1	Genbank	gene	1151	1717	.	-	.	ID=gene-J4731_07220;Name=J4731_07220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_07220
JAGETS010000014.1	Protein Homology	CDS	1151	1717	.	-	0	ID=cds-MBO1929006.1;Parent=gene-J4731_07220;Dbxref=NCBI_GP:MBO1929006.1;Name=MBO1929006.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012786.1;locus_tag=J4731_07220;product=fimbria/pilus outer membrane usher protein;protein_id=MBO1929006.1;transl_table=11
JAGETS010000014.1	Genbank	gene	1976	2170	.	-	.	ID=gene-J4731_07225;Name=J4731_07225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_07225
JAGETS010000014.1	GeneMarkS-2+	CDS	1976	2170	.	-	0	ID=cds-MBO1929007.1;Parent=gene-J4731_07225;Dbxref=NCBI_GP:MBO1929007.1;Name=MBO1929007.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_07225;product=hypothetical protein;protein_id=MBO1929007.1;transl_table=11
JAGETS010000014.1	Genbank	gene	2134	2241	.	-	.	ID=gene-J4731_07230;Name=J4731_07230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_07230
JAGETS010000014.1	Protein Homology	CDS	2134	2241	.	-	0	ID=cds-MBO1929008.1;Parent=gene-J4731_07230;Dbxref=NCBI_GP:MBO1929008.1;Name=MBO1929008.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025320.1;locus_tag=J4731_07230;product=hypothetical protein;protein_id=MBO1929008.1;transl_table=11
JAGETS010000014.1	Genbank	pseudogene	2496	3024	.	-	.	ID=gene-J4731_07235;Name=J4731_07235;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_07235;pseudo=true
JAGETS010000014.1	Protein Homology	CDS	2496	3024	.	-	0	ID=cds-J4731_07235;Parent=gene-J4731_07235;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004258966.1;locus_tag=J4731_07235;product=type 1 fimbrial protein;pseudo=true;transl_table=11
JAGETS010000014.1	Genbank	pseudogene	3690	5049	.	-	.	ID=gene-J4731_07240;Name=dcuC;gbkey=Gene;gene=dcuC;gene_biotype=pseudogene;locus_tag=J4731_07240;pseudo=true
JAGETS010000014.1	Protein Homology	CDS	3690	5049	.	-	0	ID=cds-J4731_07240;Parent=gene-J4731_07240;Note=frameshifted;gbkey=CDS;gene=dcuC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004264197.1;locus_tag=J4731_07240;product=C4-dicarboxylate transporter DcuC;pseudo=true;transl_table=11
JAGETS010000014.1	Genbank	pseudogene	5084	6251	.	-	.	ID=gene-J4731_07245;Name=J4731_07245;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_07245;pseudo=true
JAGETS010000014.1	Protein Homology	CDS	5084	6251	.	-	0	ID=cds-J4731_07245;Parent=gene-J4731_07245;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017628459.1;locus_tag=J4731_07245;product=PLP-dependent transferase;pseudo=true;transl_table=11
JAGETS010000014.1	Genbank	pseudogene	6642	7996	.	+	.	ID=gene-J4731_07250;Name=J4731_07250;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_07250;pseudo=true
JAGETS010000014.1	Protein Homology	CDS	6642	7996	.	+	0	ID=cds-J4731_07250;Parent=gene-J4731_07250;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004264205.1;locus_tag=J4731_07250;product=adenylosuccinate lyase;pseudo=true;transl_table=11
JAGETS010000014.1	Genbank	pseudogene	8073	9434	.	+	.	ID=gene-J4731_07255;Name=J4731_07255;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_07255;pseudo=true
JAGETS010000014.1	Protein Homology	CDS	8073	9434	.	+	0	ID=cds-J4731_07255;Parent=gene-J4731_07255;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004244493.1;locus_tag=J4731_07255;product=MmgE/PrpD family protein;pseudo=true;transl_table=11
JAGETS010000014.1	Genbank	pseudogene	9493	10369	.	-	.	ID=gene-J4731_07260;Name=J4731_07260;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_07260;pseudo=true
JAGETS010000014.1	Protein Homology	CDS	9493	10369	.	-	0	ID=cds-J4731_07260;Parent=gene-J4731_07260;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004264208.1;locus_tag=J4731_07260;product=dihydrodipicolinate synthase family protein;pseudo=true;transl_table=11
JAGETS010000014.1	Genbank	pseudogene	10420	11267	.	-	.	ID=gene-J4731_07265;Name=J4731_07265;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_07265;pseudo=true
JAGETS010000014.1	Protein Homology	CDS	10420	11267	.	-	0	ID=cds-J4731_07265;Parent=gene-J4731_07265;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013813894.1;locus_tag=J4731_07265;product=LysR family transcriptional regulator;pseudo=true;transl_table=11
JAGETS010000014.1	Genbank	pseudogene	11823	14251	.	+	.	ID=gene-J4731_07270;Name=J4731_07270;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_07270;pseudo=true
JAGETS010000014.1	Protein Homology	CDS	11823	14251	.	+	0	ID=cds-J4731_07270;Parent=gene-J4731_07270;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313335.1;locus_tag=J4731_07270;product=DEAD/DEAH box helicase family protein;pseudo=true;transl_table=11
JAGETS010000014.1	Genbank	pseudogene	14323	15788	.	+	.	ID=gene-J4731_07275;Name=J4731_07275;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_07275;pseudo=true
JAGETS010000014.1	Protein Homology	CDS	14323	15788	.	+	0	ID=cds-J4731_07275;Parent=gene-J4731_07275;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006319697.1;locus_tag=J4731_07275;product=N-6 DNA methylase;pseudo=true;transl_table=11
JAGETS010000014.1	Genbank	pseudogene	15788	17540	.	+	.	ID=gene-J4731_07280;Name=J4731_07280;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_07280;pseudo=true
JAGETS010000014.1	Protein Homology	CDS	15788	17540	.	+	0	ID=cds-J4731_07280;Parent=gene-J4731_07280;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000110086.1;locus_tag=J4731_07280;product=restriction endonuclease subunit S;pseudo=true;transl_table=11
JAGETS010000014.1	Genbank	pseudogene	18099	18969	.	+	.	ID=gene-J4731_07285;Name=J4731_07285;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_07285;pseudo=true
JAGETS010000014.1	Protein Homology	CDS	18099	18969	.	+	0	ID=cds-J4731_07285;Parent=gene-J4731_07285;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014658263.1;locus_tag=J4731_07285;product=hypothetical protein;pseudo=true;transl_table=11
JAGETS010000014.1	Genbank	gene	19078	19368	.	+	.	ID=gene-J4731_07290;Name=J4731_07290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_07290
JAGETS010000014.1	Protein Homology	CDS	19078	19368	.	+	0	ID=cds-MBO1929009.1;Parent=gene-J4731_07290;Dbxref=NCBI_GP:MBO1929009.1;Name=MBO1929009.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018538.1;locus_tag=J4731_07290;product=DUF1240 domain-containing protein;protein_id=MBO1929009.1;transl_table=11
JAGETS010000014.1	Genbank	pseudogene	19479	19953	.	-	.	ID=gene-J4731_07295;Name=J4731_07295;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_07295;pseudo=true
JAGETS010000014.1	Protein Homology	CDS	19479	19953	.	-	0	ID=cds-J4731_07295;Parent=gene-J4731_07295;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004264229.1;locus_tag=J4731_07295;product=Hcp family type VI secretion system effector;pseudo=true;transl_table=11
JAGETS010000014.1	Genbank	pseudogene	20112	20245	.	-	.	ID=gene-J4731_07300;Name=J4731_07300;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_07300;pseudo=true
JAGETS010000014.1	Protein Homology	CDS	20112	20245	.	-	0	ID=cds-J4731_07300;Parent=gene-J4731_07300;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004264260.1;locus_tag=J4731_07300;product=antitermination protein Q;pseudo=true;transl_table=11
JAGETS010000014.1	Genbank	gene	20771	21259	.	-	.	ID=gene-J4731_07305;Name=J4731_07305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_07305
JAGETS010000014.1	GeneMarkS-2+	CDS	20771	21259	.	-	0	ID=cds-MBO1929010.1;Parent=gene-J4731_07305;Dbxref=NCBI_GP:MBO1929010.1;Name=MBO1929010.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_07305;product=DUF1524 domain-containing protein;protein_id=MBO1929010.1;transl_table=11
JAGETS010000014.1	Genbank	gene	21615	21896	.	-	.	ID=gene-J4731_07310;Name=J4731_07310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_07310
JAGETS010000014.1	GeneMarkS-2+	CDS	21615	21896	.	-	0	ID=cds-MBO1929011.1;Parent=gene-J4731_07310;Dbxref=NCBI_GP:MBO1929011.1;Name=MBO1929011.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_07310;product=hypothetical protein;protein_id=MBO1929011.1;transl_table=11
JAGETS010000014.1	Genbank	gene	21893	22120	.	-	.	ID=gene-J4731_07315;Name=J4731_07315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_07315
JAGETS010000014.1	GeneMarkS-2+	CDS	21893	22120	.	-	0	ID=cds-MBO1929012.1;Parent=gene-J4731_07315;Dbxref=NCBI_GP:MBO1929012.1;Name=MBO1929012.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_07315;product=hypothetical protein;protein_id=MBO1929012.1;transl_table=11
JAGETS010000014.1	Genbank	gene	22111	22317	.	-	.	ID=gene-J4731_07320;Name=J4731_07320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_07320
JAGETS010000014.1	Protein Homology	CDS	22111	22317	.	-	0	ID=cds-MBO1929013.1;Parent=gene-J4731_07320;Dbxref=NCBI_GP:MBO1929013.1;Name=MBO1929013.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015210.1;locus_tag=J4731_07320;product=DUF262 domain-containing protein;protein_id=MBO1929013.1;transl_table=11
JAGETS010000014.1	Genbank	pseudogene	22694	23069	.	-	.	ID=gene-J4731_07325;Name=J4731_07325;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_07325;pseudo=true
JAGETS010000014.1	Protein Homology	CDS	22694	23069	.	-	0	ID=cds-J4731_07325;Parent=gene-J4731_07325;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006662517.1;locus_tag=J4731_07325;product=DUF932 domain-containing protein;pseudo=true;transl_table=11
##sequence-region JAGETS010000015.1 1 116562
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=587
JAGETS010000015.1	Genbank	region	1	116562	.	+	.	ID=JAGETS010000015.1:1..116562;Dbxref=taxon:587;collected-by=NHLS;collection-date=2018;country=South Africa: Pretoria;gbkey=Src;isolation-source=stool;lat-lon=25.7479 S 28.2293 E;mol_type=genomic DNA;nat-host=porcine;strain=SG003
JAGETS010000015.1	Genbank	gene	1	1274	.	-	.	ID=gene-J4731_07330;Name=J4731_07330;gbkey=Gene;gene_biotype=rRNA;locus_tag=J4731_07330;partial=true;start_range=.,1
JAGETS010000015.1	cmsearch	rRNA	1	1274	.	-	.	ID=rna-J4731_07330;Parent=gene-J4731_07330;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=J4731_07330;partial=true;product=16S ribosomal RNA;start_range=.,1
JAGETS010000015.1	cmsearch	exon	1	1274	.	-	.	ID=exon-J4731_07330-1;Parent=rna-J4731_07330;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=J4731_07330;partial=true;product=16S ribosomal RNA;start_range=.,1
JAGETS010000015.1	Genbank	pseudogene	1772	2285	.	-	.	ID=gene-J4731_07335;Name=gmhB;gbkey=Gene;gene=gmhB;gene_biotype=pseudogene;locus_tag=J4731_07335;pseudo=true
JAGETS010000015.1	Protein Homology	CDS	1772	2285	.	-	0	ID=cds-J4731_07335;Parent=gene-J4731_07335;Note=frameshifted;gbkey=CDS;gene=gmhB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133956.1;locus_tag=J4731_07335;product=D-glycero-beta-D-manno-heptose 1%2C7-bisphosphate 7-phosphatase;pseudo=true;transl_table=11
JAGETS010000015.1	Genbank	pseudogene	2495	3502	.	+	.	ID=gene-J4731_07340;Name=metN;gbkey=Gene;gene=metN;gene_biotype=pseudogene;locus_tag=J4731_07340;pseudo=true
JAGETS010000015.1	Protein Homology	CDS	2495	3502	.	+	0	ID=cds-J4731_07340;Parent=gene-J4731_07340;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;gene=metN;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212161.1;locus_tag=J4731_07340;product=methionine ABC transporter ATP-binding protein MetN;pseudo=true;transl_table=11
JAGETS010000015.1	Genbank	pseudogene	3503	4155	.	+	.	ID=gene-J4731_07345;Name=metI;gbkey=Gene;gene=metI;gene_biotype=pseudogene;locus_tag=J4731_07345;pseudo=true
JAGETS010000015.1	Protein Homology	CDS	3503	4155	.	+	0	ID=cds-J4731_07345;Parent=gene-J4731_07345;Note=frameshifted;gbkey=CDS;gene=metI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006658386.1;locus_tag=J4731_07345;product=methionine ABC transporter permease MetI;pseudo=true;transl_table=11
JAGETS010000015.1	Genbank	pseudogene	4215	5029	.	+	.	ID=gene-J4731_07350;Name=J4731_07350;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_07350;pseudo=true
JAGETS010000015.1	Protein Homology	CDS	4215	5029	.	+	0	ID=cds-J4731_07350;Parent=gene-J4731_07350;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016534993.1;locus_tag=J4731_07350;product=MetQ/NlpA family lipoprotein;pseudo=true;transl_table=11
JAGETS010000015.1	Genbank	pseudogene	5153	5547	.	+	.	ID=gene-J4731_07355;Name=J4731_07355;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_07355;pseudo=true
JAGETS010000015.1	Protein Homology	CDS	5153	5547	.	+	0	ID=cds-J4731_07355;Parent=gene-J4731_07355;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004916709.1;locus_tag=J4731_07355;product=hypothetical protein;pseudo=true;transl_table=11
JAGETS010000015.1	Genbank	pseudogene	5555	6250	.	+	.	ID=gene-J4731_07360;Name=tsaA;gbkey=Gene;gene=tsaA;gene_biotype=pseudogene;locus_tag=J4731_07360;pseudo=true
JAGETS010000015.1	Protein Homology	CDS	5555	6250	.	+	0	ID=cds-J4731_07360;Parent=gene-J4731_07360;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;gene=tsaA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017628595.1;locus_tag=J4731_07360;product=tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO;pseudo=true;transl_table=11
JAGETS010000015.1	Genbank	pseudogene	6367	8080	.	+	.	ID=gene-J4731_07365;Name=proS;gbkey=Gene;gene=proS;gene_biotype=pseudogene;locus_tag=J4731_07365;pseudo=true
JAGETS010000015.1	Protein Homology	CDS	6367	8080	.	+	0	ID=cds-J4731_07365;Parent=gene-J4731_07365;Note=frameshifted;gbkey=CDS;gene=proS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005281803.1;locus_tag=J4731_07365;product=proline--tRNA ligase;pseudo=true;transl_table=11
JAGETS010000015.1	Genbank	pseudogene	8136	8884	.	-	.	ID=gene-J4731_07370;Name=chbG;gbkey=Gene;gene=chbG;gene_biotype=pseudogene;locus_tag=J4731_07370;pseudo=true
JAGETS010000015.1	Protein Homology	CDS	8136	8884	.	-	0	ID=cds-J4731_07370;Parent=gene-J4731_07370;Note=frameshifted;gbkey=CDS;gene=chbG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004257385.1;locus_tag=J4731_07370;product=chitin disaccharide deacetylase;pseudo=true;transl_table=11
JAGETS010000015.1	Genbank	pseudogene	8920	10267	.	-	.	ID=gene-J4731_07375;Name=J4731_07375;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_07375;pseudo=true
JAGETS010000015.1	Protein Homology	CDS	8920	10267	.	-	0	ID=cds-J4731_07375;Parent=gene-J4731_07375;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004257387.1;locus_tag=J4731_07375;product=6-phospho-beta-glucosidase;pseudo=true;transl_table=11
JAGETS010000015.1	Genbank	pseudogene	10275	11230	.	-	.	ID=gene-J4731_07380;Name=chbR;gbkey=Gene;gene=chbR;gene_biotype=pseudogene;locus_tag=J4731_07380;pseudo=true
JAGETS010000015.1	Protein Homology	CDS	10275	11230	.	-	0	ID=cds-J4731_07380;Parent=gene-J4731_07380;Note=frameshifted%3B internal stop;gbkey=CDS;gene=chbR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008912805.1;locus_tag=J4731_07380;product=transcriptional regulator ChbR;pseudo=true;transl_table=11
JAGETS010000015.1	Genbank	pseudogene	11249	11583	.	-	.	ID=gene-J4731_07385;Name=chbA;gbkey=Gene;gene=chbA;gene_biotype=pseudogene;locus_tag=J4731_07385;pseudo=true
JAGETS010000015.1	Protein Homology	CDS	11249	11583	.	-	0	ID=cds-J4731_07385;Parent=gene-J4731_07385;Note=frameshifted%3B internal stop;gbkey=CDS;gene=chbA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017459240.1;locus_tag=J4731_07385;product=PTS N%2CN'-diacetylchitobiose transporter subunit IIA;pseudo=true;transl_table=11
JAGETS010000015.1	Genbank	pseudogene	11626	12924	.	-	.	ID=gene-J4731_07390;Name=chbC;gbkey=Gene;gene=chbC;gene_biotype=pseudogene;locus_tag=J4731_07390;pseudo=true
JAGETS010000015.1	Protein Homology	CDS	11626	12924	.	-	0	ID=cds-J4731_07390;Parent=gene-J4731_07390;Note=frameshifted;gbkey=CDS;gene=chbC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460279.1;locus_tag=J4731_07390;product=PTS N%2CN'-diacetylchitobiose transporter subunit IIC;pseudo=true;transl_table=11
JAGETS010000015.1	Genbank	pseudogene	13091	13409	.	-	.	ID=gene-J4731_07395;Name=J4731_07395;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_07395;pseudo=true
JAGETS010000015.1	Protein Homology	CDS	13091	13409	.	-	0	ID=cds-J4731_07395;Parent=gene-J4731_07395;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310471.1;locus_tag=J4731_07395;product=PTS sugar transporter subunit IIB;pseudo=true;transl_table=11
JAGETS010000015.1	Genbank	pseudogene	13774	14413	.	-	.	ID=gene-J4731_07400;Name=J4731_07400;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_07400;pseudo=true
JAGETS010000015.1	Protein Homology	CDS	13774	14413	.	-	0	ID=cds-J4731_07400;Parent=gene-J4731_07400;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004248709.1;locus_tag=J4731_07400;product=copper resistance protein NlpE N-terminal domain-containing protein;pseudo=true;transl_table=11
JAGETS010000015.1	Genbank	pseudogene	14697	14966	.	+	.	ID=gene-J4731_07405;Name=J4731_07405;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_07405;pseudo=true
JAGETS010000015.1	Protein Homology	CDS	14697	14966	.	+	0	ID=cds-J4731_07405;Parent=gene-J4731_07405;Note=Suppresses temperature-sensitive mutations in essential genes by modulating rho-dependent transcription termination%3B frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004257417.1;locus_tag=J4731_07405;product=Rho-binding antiterminator;pseudo=true;transl_table=11
JAGETS010000015.1	Genbank	pseudogene	15015	16356	.	-	.	ID=gene-J4731_07410;Name=tilS;gbkey=Gene;gene=tilS;gene_biotype=pseudogene;locus_tag=J4731_07410;pseudo=true
JAGETS010000015.1	Protein Homology	CDS	15015	16356	.	-	0	ID=cds-J4731_07410;Parent=gene-J4731_07410;Note=frameshifted%3B internal stop;gbkey=CDS;gene=tilS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004257421.1;locus_tag=J4731_07410;product=tRNA lysidine(34) synthetase TilS;pseudo=true;transl_table=11
JAGETS010000015.1	Genbank	pseudogene	16370	17251	.	-	.	ID=gene-J4731_07415;Name=J4731_07415;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_07415;pseudo=true
JAGETS010000015.1	Protein Homology	CDS	16370	17251	.	-	0	ID=cds-J4731_07415;Parent=gene-J4731_07415;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004916738.1;locus_tag=J4731_07415;product=DMT family transporter;pseudo=true;transl_table=11
JAGETS010000015.1	Genbank	pseudogene	17398	18355	.	-	.	ID=gene-J4731_07420;Name=accA;gbkey=Gene;gene=accA;gene_biotype=pseudogene;locus_tag=J4731_07420;pseudo=true
JAGETS010000015.1	Protein Homology	CDS	17398	18355	.	-	0	ID=cds-J4731_07420;Parent=gene-J4731_07420;Note=frameshifted;gbkey=CDS;gene=accA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019455765.1;locus_tag=J4731_07420;product=acetyl-CoA carboxylase carboxyl transferase subunit alpha;pseudo=true;transl_table=11
JAGETS010000015.1	Genbank	pseudogene	18368	21800	.	-	.	ID=gene-J4731_07425;Name=dnaE;gbkey=Gene;gene=dnaE;gene_biotype=pseudogene;locus_tag=J4731_07425;pseudo=true
JAGETS010000015.1	Protein Homology	CDS	18368	21800	.	-	0	ID=cds-J4731_07425;Parent=gene-J4731_07425;Note=frameshifted%3B internal stop;gbkey=CDS;gene=dnaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459236.1;locus_tag=J4731_07425;product=DNA polymerase III subunit alpha;pseudo=true;transl_table=11
JAGETS010000015.1	Genbank	pseudogene	21854	22398	.	-	.	ID=gene-J4731_07430;Name=rnhB;gbkey=Gene;gene=rnhB;gene_biotype=pseudogene;locus_tag=J4731_07430;pseudo=true
JAGETS010000015.1	Protein Homology	CDS	21854	22398	.	-	0	ID=cds-J4731_07430;Parent=gene-J4731_07430;Note=frameshifted;gbkey=CDS;gene=rnhB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004245458.1;locus_tag=J4731_07430;product=ribonuclease HII;pseudo=true;transl_table=11
JAGETS010000015.1	Genbank	pseudogene	22398	23543	.	-	.	ID=gene-J4731_07435;Name=lpxB;gbkey=Gene;gene=lpxB;gene_biotype=pseudogene;locus_tag=J4731_07435;pseudo=true
JAGETS010000015.1	Protein Homology	CDS	22398	23543	.	-	0	ID=cds-J4731_07435;Parent=gene-J4731_07435;Note=frameshifted;gbkey=CDS;gene=lpxB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004257441.1;locus_tag=J4731_07435;product=lipid-A-disaccharide synthase;pseudo=true;transl_table=11
JAGETS010000015.1	Genbank	pseudogene	23588	24382	.	-	.	ID=gene-J4731_07440;Name=lpxA;gbkey=Gene;gene=lpxA;gene_biotype=pseudogene;locus_tag=J4731_07440;pseudo=true
JAGETS010000015.1	Protein Homology	CDS	23588	24382	.	-	0	ID=cds-J4731_07440;Parent=gene-J4731_07440;Note=frameshifted;gbkey=CDS;gene=lpxA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008912794.1;locus_tag=J4731_07440;product=acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase;pseudo=true;transl_table=11
JAGETS010000015.1	Genbank	gene	24384	24836	.	-	.	ID=gene-J4731_07445;Name=fabZ;gbkey=Gene;gene=fabZ;gene_biotype=protein_coding;locus_tag=J4731_07445
JAGETS010000015.1	Protein Homology	CDS	24384	24836	.	-	0	ID=cds-MBO1929014.1;Parent=gene-J4731_07445;Dbxref=NCBI_GP:MBO1929014.1;Name=MBO1929014.1;gbkey=CDS;gene=fabZ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004245462.1;locus_tag=J4731_07445;product=3-hydroxyacyl-ACP dehydratase FabZ;protein_id=MBO1929014.1;transl_table=11
JAGETS010000015.1	Genbank	pseudogene	24931	26000	.	-	.	ID=gene-J4731_07450;Name=lpxD;gbkey=Gene;gene=lpxD;gene_biotype=pseudogene;locus_tag=J4731_07450;pseudo=true
JAGETS010000015.1	Protein Homology	CDS	24931	26000	.	-	0	ID=cds-J4731_07450;Parent=gene-J4731_07450;Note=frameshifted;gbkey=CDS;gene=lpxD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006662992.1;locus_tag=J4731_07450;product=UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase;pseudo=true;transl_table=11
JAGETS010000015.1	Genbank	pseudogene	25961	26491	.	-	.	ID=gene-J4731_07455;Name=J4731_07455;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_07455;pseudo=true
JAGETS010000015.1	Protein Homology	CDS	25961	26491	.	-	0	ID=cds-J4731_07455;Parent=gene-J4731_07455;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212140.1;locus_tag=J4731_07455;product=OmpH family outer membrane protein;pseudo=true;transl_table=11
JAGETS010000015.1	Genbank	pseudogene	26581	28975	.	-	.	ID=gene-J4731_07460;Name=bamA;gbkey=Gene;gene=bamA;gene_biotype=pseudogene;locus_tag=J4731_07460;pseudo=true
JAGETS010000015.1	Protein Homology	CDS	26581	28975	.	-	0	ID=cds-J4731_07460;Parent=gene-J4731_07460;Note=frameshifted%3B internal stop;gbkey=CDS;gene=bamA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019078902.1;locus_tag=J4731_07460;product=outer membrane protein assembly factor BamA;pseudo=true;transl_table=11
JAGETS010000015.1	Genbank	pseudogene	29018	30362	.	-	.	ID=gene-J4731_07465;Name=rseP;gbkey=Gene;gene=rseP;gene_biotype=pseudogene;locus_tag=J4731_07465;pseudo=true
JAGETS010000015.1	Protein Homology	CDS	29018	30362	.	-	0	ID=cds-J4731_07465;Parent=gene-J4731_07465;Note=frameshifted%3B internal stop;gbkey=CDS;gene=rseP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004257481.1;locus_tag=J4731_07465;product=sigma E protease regulator RseP;pseudo=true;transl_table=11
JAGETS010000015.1	Genbank	pseudogene	30371	31221	.	-	.	ID=gene-J4731_07470;Name=cdsA;gbkey=Gene;gene=cdsA;gene_biotype=pseudogene;locus_tag=J4731_07470;pseudo=true
JAGETS010000015.1	Protein Homology	CDS	30371	31221	.	-	0	ID=cds-J4731_07470;Parent=gene-J4731_07470;Note=frameshifted;gbkey=CDS;gene=cdsA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012368302.1;locus_tag=J4731_07470;product=phosphatidate cytidylyltransferase;pseudo=true;transl_table=11
JAGETS010000015.1	Genbank	pseudogene	31230	31981	.	-	.	ID=gene-J4731_07475;Name=uppS;gbkey=Gene;gene=uppS;gene_biotype=pseudogene;locus_tag=J4731_07475;pseudo=true
JAGETS010000015.1	Protein Homology	CDS	31230	31981	.	-	0	ID=cds-J4731_07475;Parent=gene-J4731_07475;Note=frameshifted;gbkey=CDS;gene=uppS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004257489.1;locus_tag=J4731_07475;product=di-trans%2Cpoly-cis-decaprenylcistransferase;pseudo=true;transl_table=11
JAGETS010000015.1	Genbank	pseudogene	32182	33352	.	-	.	ID=gene-J4731_07480;Name=ispC;gbkey=Gene;gene=ispC;gene_biotype=pseudogene;locus_tag=J4731_07480;pseudo=true
JAGETS010000015.1	Protein Homology	CDS	32182	33352	.	-	0	ID=cds-J4731_07480;Parent=gene-J4731_07480;Note=frameshifted%3B internal stop;gbkey=CDS;gene=ispC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014657682.1;locus_tag=J4731_07480;product=1-deoxy-D-xylulose-5-phosphate reductoisomerase;pseudo=true;transl_table=11
JAGETS010000015.1	Genbank	pseudogene	33498	33982	.	-	.	ID=gene-J4731_07485;Name=frr;gbkey=Gene;gene=frr;gene_biotype=pseudogene;locus_tag=J4731_07485;pseudo=true
JAGETS010000015.1	Protein Homology	CDS	33498	33982	.	-	0	ID=cds-J4731_07485;Parent=gene-J4731_07485;Note=frameshifted;gbkey=CDS;gene=frr;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011092632.1;locus_tag=J4731_07485;product=ribosome recycling factor;pseudo=true;transl_table=11
JAGETS010000015.1	Genbank	pseudogene	34157	34879	.	-	.	ID=gene-J4731_07490;Name=pyrH;gbkey=Gene;gene=pyrH;gene_biotype=pseudogene;locus_tag=J4731_07490;pseudo=true
JAGETS010000015.1	Protein Homology	CDS	34157	34879	.	-	0	ID=cds-J4731_07490;Parent=gene-J4731_07490;Note=frameshifted;gbkey=CDS;gene=pyrH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016942182.1;locus_tag=J4731_07490;product=UMP kinase;pseudo=true;transl_table=11
JAGETS010000015.1	Genbank	pseudogene	35069	35914	.	-	.	ID=gene-J4731_07495;Name=tsf;gbkey=Gene;gene=tsf;gene_biotype=pseudogene;locus_tag=J4731_07495;pseudo=true
JAGETS010000015.1	Protein Homology	CDS	35069	35914	.	-	0	ID=cds-J4731_07495;Parent=gene-J4731_07495;Note=frameshifted;gbkey=CDS;gene=tsf;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005276101.1;locus_tag=J4731_07495;product=elongation factor Ts;pseudo=true;transl_table=11
JAGETS010000015.1	Genbank	pseudogene	36053	36771	.	-	.	ID=gene-J4731_07500;Name=rpsB;gbkey=Gene;gene=rpsB;gene_biotype=pseudogene;locus_tag=J4731_07500;pseudo=true
JAGETS010000015.1	Protein Homology	CDS	36053	36771	.	-	0	ID=cds-J4731_07500;Parent=gene-J4731_07500;Note=frameshifted;gbkey=CDS;gene=rpsB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132117.1;locus_tag=J4731_07500;product=30S ribosomal protein S2;pseudo=true;transl_table=11
JAGETS010000015.1	Genbank	pseudogene	37412	38206	.	+	.	ID=gene-J4731_07505;Name=map;gbkey=Gene;gene=map;gene_biotype=pseudogene;locus_tag=J4731_07505;pseudo=true
JAGETS010000015.1	Protein Homology	CDS	37412	38206	.	+	0	ID=cds-J4731_07505;Parent=gene-J4731_07505;Note=frameshifted;gbkey=CDS;gene=map;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004245478.1;locus_tag=J4731_07505;product=type I methionyl aminopeptidase;pseudo=true;transl_table=11
JAGETS010000015.1	Genbank	pseudogene	38322	40926	.	+	.	ID=gene-J4731_07510;Name=glnD;gbkey=Gene;gene=glnD;gene_biotype=pseudogene;locus_tag=J4731_07510;pseudo=true
JAGETS010000015.1	Protein Homology	CDS	38322	40926	.	+	0	ID=cds-J4731_07510;Parent=gene-J4731_07510;Note=frameshifted;gbkey=CDS;gene=glnD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004242210.1;locus_tag=J4731_07510;product=bifunctional uridylyltransferase/uridylyl-removing protein GlnD;pseudo=true;transl_table=11
JAGETS010000015.1	Genbank	pseudogene	40989	41809	.	+	.	ID=gene-J4731_07515;Name=dapD;gbkey=Gene;gene=dapD;gene_biotype=pseudogene;locus_tag=J4731_07515;pseudo=true
JAGETS010000015.1	Protein Homology	CDS	40989	41809	.	+	0	ID=cds-J4731_07515;Parent=gene-J4731_07515;Note=frameshifted;gbkey=CDS;gene=dapD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006814050.1;locus_tag=J4731_07515;product=2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxylate N-succinyltransferase;pseudo=true;transl_table=11
JAGETS010000015.1	Genbank	pseudogene	42227	42606	.	+	.	ID=gene-J4731_07520;Name=J4731_07520;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_07520;pseudo=true
JAGETS010000015.1	Protein Homology	CDS	42227	42606	.	+	0	ID=cds-J4731_07520;Parent=gene-J4731_07520;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225212.1;locus_tag=J4731_07520;product=DUF3461 family protein;pseudo=true;transl_table=11
JAGETS010000015.1	Genbank	pseudogene	42690	43141	.	-	.	ID=gene-J4731_07525;Name=J4731_07525;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_07525;pseudo=true
JAGETS010000015.1	Protein Homology	CDS	42690	43141	.	-	0	ID=cds-J4731_07525;Parent=gene-J4731_07525;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010248594.1;locus_tag=J4731_07525;product=flavodoxin;pseudo=true;transl_table=11
JAGETS010000015.1	Genbank	gene	43163	44275	.	-	.	ID=gene-J4731_07530;Name=truC;gbkey=Gene;gene=truC;gene_biotype=protein_coding;locus_tag=J4731_07530
JAGETS010000015.1	Protein Homology	CDS	43163	44275	.	-	0	ID=cds-MBO1929015.1;Parent=gene-J4731_07530;Dbxref=NCBI_GP:MBO1929015.1;Name=MBO1929015.1;gbkey=CDS;gene=truC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006658416.1;locus_tag=J4731_07530;product=tRNA pseudouridine(65) synthase TruC;protein_id=MBO1929015.1;transl_table=11
JAGETS010000015.1	Genbank	pseudogene	44519	45356	.	+	.	ID=gene-J4731_07535;Name=J4731_07535;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_07535;pseudo=true
JAGETS010000015.1	Protein Homology	CDS	44519	45356	.	+	0	ID=cds-J4731_07535;Parent=gene-J4731_07535;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004257530.1;locus_tag=J4731_07535;product=DUF535 family protein;pseudo=true;transl_table=11
JAGETS010000015.1	Genbank	pseudogene	45860	46374	.	-	.	ID=gene-J4731_07540;Name=syd;gbkey=Gene;gene=syd;gene_biotype=pseudogene;locus_tag=J4731_07540;pseudo=true
JAGETS010000015.1	Protein Homology	CDS	45860	46374	.	-	0	ID=cds-J4731_07540;Parent=gene-J4731_07540;Note=frameshifted%3B internal stop;gbkey=CDS;gene=syd;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008912771.1;locus_tag=J4731_07540;product=SecY-interacting protein;pseudo=true;transl_table=11
JAGETS010000015.1	Genbank	pseudogene	46564	47406	.	+	.	ID=gene-J4731_07545;Name=queF;gbkey=Gene;gene=queF;gene_biotype=pseudogene;locus_tag=J4731_07545;pseudo=true
JAGETS010000015.1	Protein Homology	CDS	46564	47406	.	+	0	ID=cds-J4731_07545;Parent=gene-J4731_07545;Note=frameshifted%3B internal stop;gbkey=CDS;gene=queF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008912770.1;locus_tag=J4731_07545;product=NADPH-dependent 7-cyano-7-deazaguanine reductase QueF;pseudo=true;transl_table=11
JAGETS010000015.1	Genbank	pseudogene	47519	48850	.	+	.	ID=gene-J4731_07550;Name=J4731_07550;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_07550;pseudo=true
JAGETS010000015.1	Protein Homology	CDS	47519	48850	.	+	0	ID=cds-J4731_07550;Parent=gene-J4731_07550;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006814059.1;locus_tag=J4731_07550;product=LOG family protein;pseudo=true;transl_table=11
JAGETS010000015.1	Genbank	pseudogene	48869	49619	.	+	.	ID=gene-J4731_07555;Name=xni;gbkey=Gene;gene=xni;gene_biotype=pseudogene;locus_tag=J4731_07555;pseudo=true
JAGETS010000015.1	Protein Homology	CDS	48869	49619	.	+	0	ID=cds-J4731_07555;Parent=gene-J4731_07555;Note=frameshifted;gbkey=CDS;gene=xni;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004257553.1;locus_tag=J4731_07555;product=flap endonuclease Xni;pseudo=true;transl_table=11
JAGETS010000015.1	Genbank	pseudogene	49671	50774	.	-	.	ID=gene-J4731_07560;Name=rlmM;gbkey=Gene;gene=rlmM;gene_biotype=pseudogene;locus_tag=J4731_07560;pseudo=true
JAGETS010000015.1	Protein Homology	CDS	49671	50774	.	-	0	ID=cds-J4731_07560;Parent=gene-J4731_07560;Note=frameshifted;gbkey=CDS;gene=rlmM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004916579.1;locus_tag=J4731_07560;product=23S rRNA (cytidine(2498)-2'-O)-methyltransferase RlmM;pseudo=true;transl_table=11
JAGETS010000015.1	Genbank	pseudogene	50767	51148	.	-	.	ID=gene-J4731_07565;Name=J4731_07565;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_07565;pseudo=true
JAGETS010000015.1	Protein Homology	CDS	50767	51148	.	-	0	ID=cds-J4731_07565;Parent=gene-J4731_07565;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004257560.1;locus_tag=J4731_07565;product=DUF423 domain-containing protein;pseudo=true;transl_table=11
JAGETS010000015.1	Genbank	pseudogene	51231	52127	.	-	.	ID=gene-J4731_07570;Name=J4731_07570;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_07570;pseudo=true
JAGETS010000015.1	Protein Homology	CDS	51231	52127	.	-	0	ID=cds-J4731_07570;Parent=gene-J4731_07570;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000044401.1;locus_tag=J4731_07570;product=transcriptional regulator GcvA;pseudo=true;transl_table=11
JAGETS010000015.1	Genbank	pseudogene	52821	54020	.	+	.	ID=gene-J4731_07575;Name=csdA;gbkey=Gene;gene=csdA;gene_biotype=pseudogene;locus_tag=J4731_07575;pseudo=true
JAGETS010000015.1	Protein Homology	CDS	52821	54020	.	+	0	ID=cds-J4731_07575;Parent=gene-J4731_07575;Note=frameshifted;gbkey=CDS;gene=csdA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012368309.1;locus_tag=J4731_07575;product=cysteine desulfurase CsdA;pseudo=true;transl_table=11
JAGETS010000015.1	Genbank	pseudogene	54039	54492	.	+	.	ID=gene-J4731_07580;Name=csdE;gbkey=Gene;gene=csdE;gene_biotype=pseudogene;locus_tag=J4731_07580;pseudo=true
JAGETS010000015.1	Protein Homology	CDS	54039	54492	.	+	0	ID=cds-J4731_07580;Parent=gene-J4731_07580;Note=frameshifted;gbkey=CDS;gene=csdE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006662978.1;locus_tag=J4731_07580;product=cysteine desulfurase sulfur acceptor subunit CsdE;pseudo=true;transl_table=11
JAGETS010000015.1	Genbank	pseudogene	54537	55341	.	-	.	ID=gene-J4731_07585;Name=tcdA;gbkey=Gene;gene=tcdA;gene_biotype=pseudogene;locus_tag=J4731_07585;pseudo=true
JAGETS010000015.1	Protein Homology	CDS	54537	55341	.	-	0	ID=cds-J4731_07585;Parent=gene-J4731_07585;Note=frameshifted;gbkey=CDS;gene=tcdA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004257579.1;locus_tag=J4731_07585;product=tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA;pseudo=true;transl_table=11
JAGETS010000015.1	Genbank	pseudogene	55331	56346	.	-	.	ID=gene-J4731_07590;Name=mltA;gbkey=Gene;gene=mltA;gene_biotype=pseudogene;locus_tag=J4731_07590;pseudo=true
JAGETS010000015.1	Protein Homology	CDS	55331	56346	.	-	0	ID=cds-J4731_07590;Parent=gene-J4731_07590;Note=frameshifted;gbkey=CDS;gene=mltA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017628579.1;locus_tag=J4731_07590;product=murein transglycosylase A;pseudo=true;transl_table=11
JAGETS010000015.1	Genbank	gene	56711	56787	.	+	.	ID=gene-J4731_07595;Name=J4731_07595;gbkey=Gene;gene_biotype=tRNA;locus_tag=J4731_07595
JAGETS010000015.1	tRNAscan-SE	tRNA	56711	56787	.	+	.	ID=rna-J4731_07595;Parent=gene-J4731_07595;anticodon=(pos:56745..56747);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=J4731_07595;product=tRNA-Met
JAGETS010000015.1	tRNAscan-SE	exon	56711	56787	.	+	.	ID=exon-J4731_07595-1;Parent=rna-J4731_07595;anticodon=(pos:56745..56747);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=J4731_07595;product=tRNA-Met
JAGETS010000015.1	Genbank	gene	56846	56922	.	+	.	ID=gene-J4731_07600;Name=J4731_07600;gbkey=Gene;gene_biotype=tRNA;locus_tag=J4731_07600
JAGETS010000015.1	tRNAscan-SE	tRNA	56846	56922	.	+	.	ID=rna-J4731_07600;Parent=gene-J4731_07600;anticodon=(pos:56880..56882);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=J4731_07600;product=tRNA-Met
JAGETS010000015.1	tRNAscan-SE	exon	56846	56922	.	+	.	ID=exon-J4731_07600-1;Parent=rna-J4731_07600;anticodon=(pos:56880..56882);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=J4731_07600;product=tRNA-Met
JAGETS010000015.1	Genbank	gene	56940	57015	.	+	.	ID=gene-J4731_07605;Name=J4731_07605;gbkey=Gene;gene_biotype=tRNA;locus_tag=J4731_07605
JAGETS010000015.1	tRNAscan-SE	tRNA	56940	57015	.	+	.	ID=rna-J4731_07605;Parent=gene-J4731_07605;anticodon=(pos:56974..56976);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=J4731_07605;product=tRNA-Met
JAGETS010000015.1	tRNAscan-SE	exon	56940	57015	.	+	.	ID=exon-J4731_07605-1;Parent=rna-J4731_07605;anticodon=(pos:56974..56976);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=J4731_07605;product=tRNA-Met
JAGETS010000015.1	Genbank	pseudogene	57155	58401	.	-	.	ID=gene-J4731_07610;Name=amiC;gbkey=Gene;gene=amiC;gene_biotype=pseudogene;locus_tag=J4731_07610;pseudo=true
JAGETS010000015.1	Protein Homology	CDS	57155	58401	.	-	0	ID=cds-J4731_07610;Parent=gene-J4731_07610;Note=frameshifted;gbkey=CDS;gene=amiC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014657669.1;locus_tag=J4731_07610;product=N-acetylmuramoyl-L-alanine amidase AmiC;pseudo=true;transl_table=11
JAGETS010000015.1	Genbank	pseudogene	58761	60097	.	+	.	ID=gene-J4731_07615;Name=argA;gbkey=Gene;gene=argA;gene_biotype=pseudogene;locus_tag=J4731_07615;pseudo=true
JAGETS010000015.1	Protein Homology	CDS	58761	60097	.	+	0	ID=cds-J4731_07615;Parent=gene-J4731_07615;Note=frameshifted;gbkey=CDS;gene=argA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010248624.1;locus_tag=J4731_07615;product=amino-acid N-acetyltransferase;pseudo=true;transl_table=11
JAGETS010000015.1	Genbank	pseudogene	60195	60762	.	-	.	ID=gene-J4731_07620;Name=J4731_07620;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_07620;pseudo=true
JAGETS010000015.1	Protein Homology	CDS	60195	60762	.	-	0	ID=cds-J4731_07620;Parent=gene-J4731_07620;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006659231.1;locus_tag=J4731_07620;product=hypothetical protein;pseudo=true;transl_table=11
JAGETS010000015.1	Genbank	pseudogene	60816	62649	.	-	.	ID=gene-J4731_07625;Name=recD;gbkey=Gene;gene=recD;gene_biotype=pseudogene;locus_tag=J4731_07625;pseudo=true
JAGETS010000015.1	Protein Homology	CDS	60816	62649	.	-	0	ID=cds-J4731_07625;Parent=gene-J4731_07625;Note=frameshifted;gbkey=CDS;gene=recD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002363326.1;locus_tag=J4731_07625;product=exodeoxyribonuclease V subunit alpha;pseudo=true;transl_table=11
JAGETS010000015.1	Genbank	pseudogene	62654	66194	.	-	.	ID=gene-J4731_07630;Name=recB;gbkey=Gene;gene=recB;gene_biotype=pseudogene;locus_tag=J4731_07630;pseudo=true
JAGETS010000015.1	Protein Homology	CDS	62654	66194	.	-	0	ID=cds-J4731_07630;Parent=gene-J4731_07630;Note=frameshifted;gbkey=CDS;gene=recB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004257598.1;locus_tag=J4731_07630;product=exodeoxyribonuclease V subunit beta;pseudo=true;transl_table=11
JAGETS010000015.1	Genbank	pseudogene	66191	69005	.	-	.	ID=gene-J4731_07635;Name=ptrA;gbkey=Gene;gene=ptrA;gene_biotype=pseudogene;locus_tag=J4731_07635;pseudo=true
JAGETS010000015.1	Protein Homology	CDS	66191	69005	.	-	0	ID=cds-J4731_07635;Parent=gene-J4731_07635;Note=frameshifted%3B internal stop;gbkey=CDS;gene=ptrA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002420424.1;locus_tag=J4731_07635;product=pitrilysin;pseudo=true;transl_table=11
JAGETS010000015.1	Genbank	pseudogene	69079	72364	.	-	.	ID=gene-J4731_07640;Name=recC;gbkey=Gene;gene=recC;gene_biotype=pseudogene;locus_tag=J4731_07640;pseudo=true
JAGETS010000015.1	Protein Homology	CDS	69079	72364	.	-	0	ID=cds-J4731_07640;Parent=gene-J4731_07640;Note=frameshifted%3B internal stop;gbkey=CDS;gene=recC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002220072.1;locus_tag=J4731_07640;product=exodeoxyribonuclease V subunit gamma;pseudo=true;transl_table=11
JAGETS010000015.1	Genbank	gene	72805	73002	.	-	.	ID=gene-J4731_07645;Name=J4731_07645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_07645
JAGETS010000015.1	GeneMarkS-2+	CDS	72805	73002	.	-	0	ID=cds-MBO1929016.1;Parent=gene-J4731_07645;Dbxref=NCBI_GP:MBO1929016.1;Name=MBO1929016.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_07645;product=hypothetical protein;protein_id=MBO1929016.1;transl_table=11
JAGETS010000015.1	Genbank	pseudogene	73108	73672	.	-	.	ID=gene-J4731_07650;Name=J4731_07650;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_07650;pseudo=true
JAGETS010000015.1	Protein Homology	CDS	73108	73672	.	-	0	ID=cds-J4731_07650;Parent=gene-J4731_07650;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004924958.1;locus_tag=J4731_07650;product=prepilin-type N-terminal cleavage/methylation domain-containing protein;pseudo=true;transl_table=11
JAGETS010000015.1	Genbank	gene	73831	74073	.	-	.	ID=gene-J4731_07655;Name=J4731_07655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_07655
JAGETS010000015.1	GeneMarkS-2+	CDS	73831	74073	.	-	0	ID=cds-MBO1929017.1;Parent=gene-J4731_07655;Dbxref=NCBI_GP:MBO1929017.1;Name=MBO1929017.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_07655;product=hypothetical protein;protein_id=MBO1929017.1;transl_table=11
JAGETS010000015.1	Genbank	pseudogene	74454	75300	.	-	.	ID=gene-J4731_07660;Name=J4731_07660;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_07660;pseudo=true
JAGETS010000015.1	Protein Homology	CDS	74454	75300	.	-	0	ID=cds-J4731_07660;Parent=gene-J4731_07660;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004924967.1;locus_tag=J4731_07660;product=thymidylate synthase;pseudo=true;transl_table=11
JAGETS010000015.1	Genbank	pseudogene	75438	76295	.	-	.	ID=gene-J4731_07665;Name=lgt;gbkey=Gene;gene=lgt;gene_biotype=pseudogene;locus_tag=J4731_07665;pseudo=true
JAGETS010000015.1	Protein Homology	CDS	75438	76295	.	-	0	ID=cds-J4731_07665;Parent=gene-J4731_07665;Note=frameshifted;gbkey=CDS;gene=lgt;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011144998.1;locus_tag=J4731_07665;product=prolipoprotein diacylglyceryl transferase;pseudo=true;transl_table=11
JAGETS010000015.1	Genbank	pseudogene	76432	78684	.	-	.	ID=gene-J4731_07670;Name=ptsP;gbkey=Gene;gene=ptsP;gene_biotype=pseudogene;locus_tag=J4731_07670;pseudo=true
JAGETS010000015.1	Protein Homology	CDS	76432	78684	.	-	0	ID=cds-J4731_07670;Parent=gene-J4731_07670;Note=frameshifted;gbkey=CDS;gene=ptsP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012990021.1;locus_tag=J4731_07670;product=phosphoenolpyruvate--protein phosphotransferase;pseudo=true;transl_table=11
JAGETS010000015.1	Genbank	pseudogene	78688	79208	.	-	.	ID=gene-J4731_07675;Name=rppH;gbkey=Gene;gene=rppH;gene_biotype=pseudogene;locus_tag=J4731_07675;pseudo=true
JAGETS010000015.1	Protein Homology	CDS	78688	79208	.	-	0	ID=cds-J4731_07675;Parent=gene-J4731_07675;Note=frameshifted%3B internal stop;gbkey=CDS;gene=rppH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004924973.1;locus_tag=J4731_07675;product=RNA pyrophosphohydrolase;pseudo=true;transl_table=11
JAGETS010000015.1	cmsearch	riboswitch	79320	79416	.	+	.	ID=id-JAGETS010000015.1:79320..79416;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch
JAGETS010000015.1	Genbank	pseudogene	79475	80470	.	+	.	ID=gene-J4731_07680;Name=J4731_07680;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_07680;pseudo=true
JAGETS010000015.1	Protein Homology	CDS	79475	80470	.	+	0	ID=cds-J4731_07680;Parent=gene-J4731_07680;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004257642.1;locus_tag=J4731_07680;product=thiamine ABC transporter substrate binding subunit;pseudo=true;transl_table=11
JAGETS010000015.1	Genbank	pseudogene	80446	82034	.	+	.	ID=gene-J4731_07685;Name=thiP;gbkey=Gene;gene=thiP;gene_biotype=pseudogene;locus_tag=J4731_07685;pseudo=true
JAGETS010000015.1	Protein Homology	CDS	80446	82034	.	+	0	ID=cds-J4731_07685;Parent=gene-J4731_07685;Note=frameshifted;gbkey=CDS;gene=thiP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014657660.1;locus_tag=J4731_07685;product=thiamine/thiamine pyrophosphate ABC transporter permease ThiP;pseudo=true;transl_table=11
JAGETS010000015.1	Genbank	pseudogene	82027	82732	.	+	.	ID=gene-J4731_07690;Name=thiQ;gbkey=Gene;gene=thiQ;gene_biotype=pseudogene;locus_tag=J4731_07690;pseudo=true
JAGETS010000015.1	Protein Homology	CDS	82027	82732	.	+	0	ID=cds-J4731_07690;Parent=gene-J4731_07690;Note=frameshifted;gbkey=CDS;gene=thiQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004257651.1;locus_tag=J4731_07690;product=thiamine ABC transporter ATP-binding protein ThiQ;pseudo=true;transl_table=11
JAGETS010000015.1	Genbank	pseudogene	82806	85114	.	+	.	ID=gene-J4731_07695;Name=J4731_07695;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_07695;pseudo=true
JAGETS010000015.1	Protein Homology	CDS	82806	85114	.	+	0	ID=cds-J4731_07695;Parent=gene-J4731_07695;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006659215.1;locus_tag=J4731_07695;product=DNA polymerase II;pseudo=true;transl_table=11
JAGETS010000015.1	Genbank	pseudogene	85487	88362	.	+	.	ID=gene-J4731_07700;Name=rapA;gbkey=Gene;gene=rapA;gene_biotype=pseudogene;locus_tag=J4731_07700;pseudo=true
JAGETS010000015.1	Protein Homology	CDS	85487	88362	.	+	0	ID=cds-J4731_07700;Parent=gene-J4731_07700;Note=frameshifted%3B internal stop;gbkey=CDS;gene=rapA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012005181.1;locus_tag=J4731_07700;product=RNA polymerase-associated protein RapA;pseudo=true;transl_table=11
JAGETS010000015.1	Genbank	pseudogene	88508	89153	.	+	.	ID=gene-J4731_07705;Name=rluA;gbkey=Gene;gene=rluA;gene_biotype=pseudogene;locus_tag=J4731_07705;pseudo=true
JAGETS010000015.1	Protein Homology	CDS	88508	89153	.	+	0	ID=cds-J4731_07705;Parent=gene-J4731_07705;Note=frameshifted%3B internal stop;gbkey=CDS;gene=rluA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004932866.1;locus_tag=J4731_07705;product=bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA;pseudo=true;transl_table=11
JAGETS010000015.1	Genbank	pseudogene	89850	90654	.	-	.	ID=gene-J4731_07710;Name=djlA;gbkey=Gene;gene=djlA;gene_biotype=pseudogene;locus_tag=J4731_07710;pseudo=true
JAGETS010000015.1	Protein Homology	CDS	89850	90654	.	-	0	ID=cds-J4731_07710;Parent=gene-J4731_07710;Note=frameshifted%3B internal stop;gbkey=CDS;gene=djlA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008912739.1;locus_tag=J4731_07710;product=co-chaperone DjlA;pseudo=true;transl_table=11
JAGETS010000015.1	Genbank	pseudogene	90867	93165	.	+	.	ID=gene-J4731_07715;Name=lptD;gbkey=Gene;gene=lptD;gene_biotype=pseudogene;locus_tag=J4731_07715;pseudo=true
JAGETS010000015.1	Protein Homology	CDS	90867	93165	.	+	0	ID=cds-J4731_07715;Parent=gene-J4731_07715;Note=frameshifted%3B internal stop;gbkey=CDS;gene=lptD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012368321.1;locus_tag=J4731_07715;product=LPS assembly protein LptD;pseudo=true;transl_table=11
JAGETS010000015.1	Genbank	pseudogene	93354	94637	.	+	.	ID=gene-J4731_07720;Name=surA;gbkey=Gene;gene=surA;gene_biotype=pseudogene;locus_tag=J4731_07720;pseudo=true
JAGETS010000015.1	Protein Homology	CDS	93354	94637	.	+	0	ID=cds-J4731_07720;Parent=gene-J4731_07720;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;gene=surA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005167006.1;locus_tag=J4731_07720;product=peptidylprolyl isomerase SurA;pseudo=true;transl_table=11
JAGETS010000015.1	Genbank	pseudogene	94656	95627	.	+	.	ID=gene-J4731_07725;Name=pdxA;gbkey=Gene;gene=pdxA;gene_biotype=pseudogene;locus_tag=J4731_07725;pseudo=true
JAGETS010000015.1	Protein Homology	CDS	94656	95627	.	+	0	ID=cds-J4731_07725;Parent=gene-J4731_07725;Note=frameshifted;gbkey=CDS;gene=pdxA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002220722.1;locus_tag=J4731_07725;product=4-hydroxythreonine-4-phosphate dehydrogenase PdxA;pseudo=true;transl_table=11
JAGETS010000015.1	Genbank	pseudogene	95624	96410	.	+	.	ID=gene-J4731_07730;Name=rsmA;gbkey=Gene;gene=rsmA;gene_biotype=pseudogene;locus_tag=J4731_07730;pseudo=true
JAGETS010000015.1	Protein Homology	CDS	95624	96410	.	+	0	ID=cds-J4731_07730;Parent=gene-J4731_07730;Note=frameshifted%3B internal stop;gbkey=CDS;gene=rsmA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012005175.1;locus_tag=J4731_07730;product=16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA;pseudo=true;transl_table=11
JAGETS010000015.1	Genbank	pseudogene	96486	96812	.	+	.	ID=gene-J4731_07735;Name=apaG;gbkey=Gene;gene=apaG;gene_biotype=pseudogene;locus_tag=J4731_07735;pseudo=true
JAGETS010000015.1	Protein Homology	CDS	96486	96812	.	+	0	ID=cds-J4731_07735;Parent=gene-J4731_07735;Note=frameshifted%3B internal stop;gbkey=CDS;gene=apaG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003854807.1;locus_tag=J4731_07735;product=Co2+/Mg2+ efflux protein ApaG;pseudo=true;transl_table=11
JAGETS010000015.1	Genbank	pseudogene	96815	97616	.	+	.	ID=gene-J4731_07740;Name=apaH;gbkey=Gene;gene=apaH;gene_biotype=pseudogene;locus_tag=J4731_07740;pseudo=true
JAGETS010000015.1	Protein Homology	CDS	96815	97616	.	+	0	ID=cds-J4731_07740;Parent=gene-J4731_07740;Note=frameshifted;gbkey=CDS;gene=apaH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009111397.1;locus_tag=J4731_07740;product=bis(5'-nucleosyl)-tetraphosphatase (symmetrical) ApaH;pseudo=true;transl_table=11
JAGETS010000015.1	Genbank	pseudogene	97685	98178	.	-	.	ID=gene-J4731_07745;Name=folA;gbkey=Gene;gene=folA;gene_biotype=pseudogene;locus_tag=J4731_07745;pseudo=true
JAGETS010000015.1	Protein Homology	CDS	97685	98178	.	-	0	ID=cds-J4731_07745;Parent=gene-J4731_07745;Note=frameshifted;gbkey=CDS;gene=folA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012988299.1;locus_tag=J4731_07745;product=type 3 dihydrofolate reductase;pseudo=true;transl_table=11
JAGETS010000015.1	Genbank	pseudogene	98415	99037	.	+	.	ID=gene-J4731_07750;Name=J4731_07750;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_07750;pseudo=true
JAGETS010000015.1	Protein Homology	CDS	98415	99037	.	+	0	ID=cds-J4731_07750;Parent=gene-J4731_07750;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105689.1;locus_tag=J4731_07750;product=LysE family transporter;pseudo=true;transl_table=11
JAGETS010000015.1	Genbank	pseudogene	99234	99555	.	-	.	ID=gene-J4731_07755;Name=J4731_07755;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_07755;pseudo=true
JAGETS010000015.1	Protein Homology	CDS	99234	99555	.	-	0	ID=cds-J4731_07755;Parent=gene-J4731_07755;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004242168.1;locus_tag=J4731_07755;product=multicopper oxidase domain-containing protein;pseudo=true;transl_table=11
JAGETS010000015.1	Genbank	pseudogene	99588	100453	.	-	.	ID=gene-J4731_07760;Name=J4731_07760;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_07760;pseudo=true
JAGETS010000015.1	Protein Homology	CDS	99588	100453	.	-	0	ID=cds-J4731_07760;Parent=gene-J4731_07760;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004095266.1;locus_tag=J4731_07760;product=multicopper oxidase domain-containing protein;pseudo=true;transl_table=11
JAGETS010000015.1	Genbank	pseudogene	100969	101695	.	-	.	ID=gene-J4731_07765;Name=J4731_07765;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_07765;pseudo=true
JAGETS010000015.1	Protein Homology	CDS	100969	101695	.	-	0	ID=cds-J4731_07765;Parent=gene-J4731_07765;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014657639.1;locus_tag=J4731_07765;product=1-acylglycerol-3-phosphate O-acyltransferase;pseudo=true;transl_table=11
JAGETS010000015.1	Genbank	pseudogene	101806	104054	.	-	.	ID=gene-J4731_07770;Name=parC;gbkey=Gene;gene=parC;gene_biotype=pseudogene;locus_tag=J4731_07770;pseudo=true
JAGETS010000015.1	Protein Homology	CDS	101806	104054	.	-	0	ID=cds-J4731_07770;Parent=gene-J4731_07770;Note=frameshifted;gbkey=CDS;gene=parC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006814102.1;locus_tag=J4731_07770;product=DNA topoisomerase IV subunit A;pseudo=true;transl_table=11
JAGETS010000015.1	Genbank	pseudogene	104088	105960	.	-	.	ID=gene-J4731_07775;Name=parE;gbkey=Gene;gene=parE;gene_biotype=pseudogene;locus_tag=J4731_07775;pseudo=true
JAGETS010000015.1	Protein Homology	CDS	104088	105960	.	-	0	ID=cds-J4731_07775;Parent=gene-J4731_07775;Note=frameshifted;gbkey=CDS;gene=parE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417502.1;locus_tag=J4731_07775;product=DNA topoisomerase IV subunit B;pseudo=true;transl_table=11
JAGETS010000015.1	Genbank	pseudogene	105995	106624	.	-	.	ID=gene-J4731_07780;Name=yqiA;gbkey=Gene;gene=yqiA;gene_biotype=pseudogene;locus_tag=J4731_07780;pseudo=true
JAGETS010000015.1	Protein Homology	CDS	105995	106624	.	-	0	ID=cds-J4731_07780;Parent=gene-J4731_07780;Note=frameshifted%3B internal stop;gbkey=CDS;gene=yqiA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004155233.1;locus_tag=J4731_07780;product=esterase YqiA;pseudo=true;transl_table=11
JAGETS010000015.1	Genbank	pseudogene	106632	107471	.	-	.	ID=gene-J4731_07785;Name=cpdA;gbkey=Gene;gene=cpdA;gene_biotype=pseudogene;locus_tag=J4731_07785;pseudo=true
JAGETS010000015.1	Protein Homology	CDS	106632	107471	.	-	0	ID=cds-J4731_07785;Parent=gene-J4731_07785;Note=frameshifted;gbkey=CDS;gene=cpdA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004242163.1;locus_tag=J4731_07785;product=3'%2C5'-cyclic-AMP phosphodiesterase;pseudo=true;transl_table=11
JAGETS010000015.1	Genbank	pseudogene	107614	108241	.	-	.	ID=gene-J4731_07790;Name=nudF;gbkey=Gene;gene=nudF;gene_biotype=pseudogene;locus_tag=J4731_07790;pseudo=true
JAGETS010000015.1	Protein Homology	CDS	107614	108241	.	-	0	ID=cds-J4731_07790;Parent=gene-J4731_07790;Note=frameshifted;gbkey=CDS;gene=nudF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004925129.1;locus_tag=J4731_07790;product=ADP-ribose diphosphatase;pseudo=true;transl_table=11
JAGETS010000015.1	Genbank	pseudogene	108571	109924	.	+	.	ID=gene-J4731_07795;Name=tolC;gbkey=Gene;gene=tolC;gene_biotype=pseudogene;locus_tag=J4731_07795;pseudo=true
JAGETS010000015.1	Protein Homology	CDS	108571	109924	.	+	0	ID=cds-J4731_07795;Parent=gene-J4731_07795;Note=frameshifted;gbkey=CDS;gene=tolC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016808003.1;locus_tag=J4731_07795;product=outer membrane channel protein TolC;pseudo=true;transl_table=11
JAGETS010000015.1	Genbank	pseudogene	110320	111009	.	+	.	ID=gene-J4731_07800;Name=J4731_07800;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_07800;pseudo=true
JAGETS010000015.1	Protein Homology	CDS	110320	111009	.	+	0	ID=cds-J4731_07800;Parent=gene-J4731_07800;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004257725.1;locus_tag=J4731_07800;product=DUF1190 family protein;pseudo=true;transl_table=11
JAGETS010000015.1	Genbank	pseudogene	111016	112157	.	+	.	ID=gene-J4731_07805;Name=J4731_07805;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_07805;pseudo=true
JAGETS010000015.1	Protein Homology	CDS	111016	112157	.	+	0	ID=cds-J4731_07805;Parent=gene-J4731_07805;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008814816.1;locus_tag=J4731_07805;product=glutathionylspermidine synthase family protein;pseudo=true;transl_table=11
JAGETS010000015.1	Genbank	pseudogene	112238	112948	.	-	.	ID=gene-J4731_07810;Name=ygiD;gbkey=Gene;gene=ygiD;gene_biotype=pseudogene;locus_tag=J4731_07810;pseudo=true
JAGETS010000015.1	Protein Homology	CDS	112238	112948	.	-	0	ID=cds-J4731_07810;Parent=gene-J4731_07810;Note=frameshifted;gbkey=CDS;gene=ygiD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004168326.1;locus_tag=J4731_07810;product=4%2C5-DOPA dioxygenase extradiol;pseudo=true;transl_table=11
JAGETS010000015.1	Genbank	pseudogene	113227	113862	.	-	.	ID=gene-J4731_07815;Name=ribB;gbkey=Gene;gene=ribB;gene_biotype=pseudogene;locus_tag=J4731_07815;pseudo=true
JAGETS010000015.1	Protein Homology	CDS	113227	113862	.	-	0	ID=cds-J4731_07815;Parent=gene-J4731_07815;Note=frameshifted;gbkey=CDS;gene=ribB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006814113.1;locus_tag=J4731_07815;product=3%2C4-dihydroxy-2-butanone-4-phosphate synthase;pseudo=true;transl_table=11
JAGETS010000015.1	Genbank	gene	114383	114565	.	+	.	ID=gene-J4731_07820;Name=J4731_07820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_07820
JAGETS010000015.1	Protein Homology	CDS	114383	114565	.	+	0	ID=cds-MBO1929018.1;Parent=gene-J4731_07820;Dbxref=NCBI_GP:MBO1929018.1;Name=MBO1929018.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004249470.1;locus_tag=J4731_07820;product=accessory factor UbiK family protein;protein_id=MBO1929018.1;transl_table=11
JAGETS010000015.1	Genbank	pseudogene	114780	116221	.	+	.	ID=gene-J4731_07825;Name=J4731_07825;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_07825;pseudo=true
JAGETS010000015.1	Protein Homology	CDS	114780	116221	.	+	0	ID=cds-J4731_07825;Parent=gene-J4731_07825;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020196412.1;locus_tag=J4731_07825;product=site-specific integrase;pseudo=true;transl_table=11
JAGETS010000015.1	Genbank	pseudogene	116277	116562	.	+	.	ID=gene-J4731_07830;Name=J4731_07830;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_07830;pseudo=true
JAGETS010000015.1	Protein Homology	CDS	116277	116562	.	+	0	ID=cds-J4731_07830;Parent=gene-J4731_07830;Note=frameshifted%3B incomplete%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016807537.1;locus_tag=J4731_07830;product=integrase;pseudo=true;transl_table=11
##sequence-region JAGETS010000016.1 1 196258
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=587
JAGETS010000016.1	Genbank	region	1	196258	.	+	.	ID=JAGETS010000016.1:1..196258;Dbxref=taxon:587;collected-by=NHLS;collection-date=2018;country=South Africa: Pretoria;gbkey=Src;isolation-source=stool;lat-lon=25.7479 S 28.2293 E;mol_type=genomic DNA;nat-host=porcine;strain=SG003
JAGETS010000016.1	Genbank	pseudogene	97	304	.	-	.	ID=gene-J4731_07835;Name=J4731_07835;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_07835;pseudo=true
JAGETS010000016.1	Protein Homology	CDS	97	304	.	-	0	ID=cds-J4731_07835;Parent=gene-J4731_07835;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004921673.1;locus_tag=J4731_07835;product=DUF465 domain-containing protein;pseudo=true;transl_table=11
JAGETS010000016.1	Genbank	pseudogene	572	1031	.	+	.	ID=gene-J4731_07840;Name=J4731_07840;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_07840;pseudo=true
JAGETS010000016.1	Protein Homology	CDS	572	1031	.	+	0	ID=cds-J4731_07840;Parent=gene-J4731_07840;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004261770.1;locus_tag=J4731_07840;product=ecotin;pseudo=true;transl_table=11
JAGETS010000016.1	Genbank	pseudogene	1234	1654	.	-	.	ID=gene-J4731_07845;Name=J4731_07845;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_07845;pseudo=true
JAGETS010000016.1	Protein Homology	CDS	1234	1654	.	-	0	ID=cds-J4731_07845;Parent=gene-J4731_07845;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004238583.1;locus_tag=J4731_07845;product=universal stress protein;pseudo=true;transl_table=11
JAGETS010000016.1	Genbank	pseudogene	2069	2857	.	+	.	ID=gene-J4731_07850;Name=J4731_07850;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_07850;pseudo=true
JAGETS010000016.1	Protein Homology	CDS	2069	2857	.	+	0	ID=cds-J4731_07850;Parent=gene-J4731_07850;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004243988.1;locus_tag=J4731_07850;product=cation transporter;pseudo=true;transl_table=11
JAGETS010000016.1	Genbank	pseudogene	3116	4146	.	+	.	ID=gene-J4731_07855;Name=J4731_07855;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_07855;pseudo=true
JAGETS010000016.1	Protein Homology	CDS	3116	4146	.	+	0	ID=cds-J4731_07855;Parent=gene-J4731_07855;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004261681.1;locus_tag=J4731_07855;product=galactose-1-epimerase;pseudo=true;transl_table=11
JAGETS010000016.1	Genbank	pseudogene	4232	5655	.	-	.	ID=gene-J4731_07860;Name=J4731_07860;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_07860;pseudo=true
JAGETS010000016.1	Protein Homology	CDS	4232	5655	.	-	0	ID=cds-J4731_07860;Parent=gene-J4731_07860;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006658067.1;locus_tag=J4731_07860;product=bifunctional 2-methylcitrate dehydratase/aconitate hydratase;pseudo=true;transl_table=11
JAGETS010000016.1	Genbank	pseudogene	5666	6748	.	-	.	ID=gene-J4731_07865;Name=prpC;gbkey=Gene;gene=prpC;gene_biotype=pseudogene;locus_tag=J4731_07865;pseudo=true
JAGETS010000016.1	Protein Homology	CDS	5666	6748	.	-	0	ID=cds-J4731_07865;Parent=gene-J4731_07865;Note=frameshifted%3B internal stop;gbkey=CDS;gene=prpC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013814496.1;locus_tag=J4731_07865;product=2-methylcitrate synthase;pseudo=true;transl_table=11
JAGETS010000016.1	Genbank	pseudogene	6878	7761	.	-	.	ID=gene-J4731_07870;Name=prpB;gbkey=Gene;gene=prpB;gene_biotype=pseudogene;locus_tag=J4731_07870;pseudo=true
JAGETS010000016.1	Protein Homology	CDS	6878	7761	.	-	0	ID=cds-J4731_07870;Parent=gene-J4731_07870;Note=frameshifted;gbkey=CDS;gene=prpB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000052185.1;locus_tag=J4731_07870;product=methylisocitrate lyase;pseudo=true;transl_table=11
JAGETS010000016.1	Genbank	pseudogene	8005	9596	.	+	.	ID=gene-J4731_07875;Name=prpR;gbkey=Gene;gene=prpR;gene_biotype=pseudogene;locus_tag=J4731_07875;pseudo=true
JAGETS010000016.1	Protein Homology	CDS	8005	9596	.	+	0	ID=cds-J4731_07875;Parent=gene-J4731_07875;Note=frameshifted;gbkey=CDS;gene=prpR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006658071.1;locus_tag=J4731_07875;product=propionate catabolism operon regulatory protein PrpR;pseudo=true;transl_table=11
JAGETS010000016.1	Genbank	pseudogene	10151	11283	.	+	.	ID=gene-J4731_07880;Name=J4731_07880;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_07880;pseudo=true
JAGETS010000016.1	Protein Homology	CDS	10151	11283	.	+	0	ID=cds-J4731_07880;Parent=gene-J4731_07880;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004261743.1;locus_tag=J4731_07880;product=MFS transporter;pseudo=true;transl_table=11
JAGETS010000016.1	Genbank	pseudogene	11326	12288	.	-	.	ID=gene-J4731_07885;Name=J4731_07885;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_07885;pseudo=true
JAGETS010000016.1	Protein Homology	CDS	11326	12288	.	-	0	ID=cds-J4731_07885;Parent=gene-J4731_07885;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006814928.1;locus_tag=J4731_07885;product=glycosyltransferase;pseudo=true;transl_table=11
JAGETS010000016.1	Genbank	pseudogene	12664	13750	.	-	.	ID=gene-J4731_07890;Name=J4731_07890;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_07890;pseudo=true
JAGETS010000016.1	Protein Homology	CDS	12664	13750	.	-	0	ID=cds-J4731_07890;Parent=gene-J4731_07890;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015741571.1;locus_tag=J4731_07890;product=acyl-CoA desaturase;pseudo=true;transl_table=11
JAGETS010000016.1	Genbank	pseudogene	14298	14623	.	+	.	ID=gene-J4731_07895;Name=J4731_07895;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_07895;pseudo=true
JAGETS010000016.1	Protein Homology	CDS	14298	14623	.	+	0	ID=cds-J4731_07895;Parent=gene-J4731_07895;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004261735.1;locus_tag=J4731_07895;product=DUF1090 family protein;pseudo=true;transl_table=11
JAGETS010000016.1	Genbank	pseudogene	14810	15722	.	+	.	ID=gene-J4731_07900;Name=J4731_07900;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_07900;pseudo=true
JAGETS010000016.1	Protein Homology	CDS	14810	15722	.	+	0	ID=cds-J4731_07900;Parent=gene-J4731_07900;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004245589.1;locus_tag=J4731_07900;product=ibestrophin;pseudo=true;transl_table=11
JAGETS010000016.1	Genbank	gene	15896	16144	.	+	.	ID=gene-J4731_07905;Name=J4731_07905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_07905
JAGETS010000016.1	Protein Homology	CDS	15896	16144	.	+	0	ID=cds-MBO1929019.1;Parent=gene-J4731_07905;Dbxref=NCBI_GP:MBO1929019.1;Name=MBO1929019.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017412659.1;locus_tag=J4731_07905;product=metal/formaldehyde-sensitive transcriptional repressor;protein_id=MBO1929019.1;transl_table=11
JAGETS010000016.1	Genbank	pseudogene	16200	17309	.	+	.	ID=gene-J4731_07910;Name=J4731_07910;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_07910;pseudo=true
JAGETS010000016.1	Protein Homology	CDS	16200	17309	.	+	0	ID=cds-J4731_07910;Parent=gene-J4731_07910;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013202337.1;locus_tag=J4731_07910;product=S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase;pseudo=true;transl_table=11
JAGETS010000016.1	Genbank	pseudogene	17320	18155	.	+	.	ID=gene-J4731_07915;Name=fghA;gbkey=Gene;gene=fghA;gene_biotype=pseudogene;locus_tag=J4731_07915;pseudo=true
JAGETS010000016.1	Protein Homology	CDS	17320	18155	.	+	0	ID=cds-J4731_07915;Parent=gene-J4731_07915;Note=frameshifted;gbkey=CDS;gene=fghA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000425438.1;locus_tag=J4731_07915;product=S-formylglutathione hydrolase;pseudo=true;transl_table=11
JAGETS010000016.1	Genbank	pseudogene	18260	18477	.	-	.	ID=gene-J4731_07920;Name=J4731_07920;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_07920;pseudo=true
JAGETS010000016.1	Protein Homology	CDS	18260	18477	.	-	0	ID=cds-J4731_07920;Parent=gene-J4731_07920;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004261720.1;locus_tag=J4731_07920;product=HEAT repeat domain-containing protein;pseudo=true;transl_table=11
JAGETS010000016.1	Genbank	pseudogene	18739	18950	.	-	.	ID=gene-J4731_07925;Name=J4731_07925;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_07925;pseudo=true
JAGETS010000016.1	Protein Homology	CDS	18739	18950	.	-	0	ID=cds-J4731_07925;Parent=gene-J4731_07925;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004261718.1;locus_tag=J4731_07925;product=HEAT repeat domain-containing protein;pseudo=true;transl_table=11
JAGETS010000016.1	Genbank	pseudogene	19252	20035	.	-	.	ID=gene-J4731_07930;Name=J4731_07930;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_07930;pseudo=true
JAGETS010000016.1	Protein Homology	CDS	19252	20035	.	-	0	ID=cds-J4731_07930;Parent=gene-J4731_07930;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004919124.1;locus_tag=J4731_07930;product=heme ABC transporter ATP-binding protein;pseudo=true;transl_table=11
JAGETS010000016.1	Genbank	pseudogene	19989	21025	.	-	.	ID=gene-J4731_07935;Name=J4731_07935;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_07935;pseudo=true
JAGETS010000016.1	Protein Homology	CDS	19989	21025	.	-	0	ID=cds-J4731_07935;Parent=gene-J4731_07935;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011146857.1;locus_tag=J4731_07935;product=iron ABC transporter permease;pseudo=true;transl_table=11
JAGETS010000016.1	Genbank	pseudogene	21012	21825	.	-	.	ID=gene-J4731_07940;Name=J4731_07940;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_07940;pseudo=true
JAGETS010000016.1	Protein Homology	CDS	21012	21825	.	-	0	ID=cds-J4731_07940;Parent=gene-J4731_07940;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004919127.1;locus_tag=J4731_07940;product=ABC transporter substrate-binding protein;pseudo=true;transl_table=11
JAGETS010000016.1	Genbank	pseudogene	21842	22936	.	-	.	ID=gene-J4731_07945;Name=J4731_07945;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_07945;pseudo=true
JAGETS010000016.1	Protein Homology	CDS	21842	22936	.	-	0	ID=cds-J4731_07945;Parent=gene-J4731_07945;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004263754.1;locus_tag=J4731_07945;product=hemin-degrading factor;pseudo=true;transl_table=11
JAGETS010000016.1	Genbank	pseudogene	22905	24893	.	-	.	ID=gene-J4731_07950;Name=J4731_07950;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_07950;pseudo=true
JAGETS010000016.1	Protein Homology	CDS	22905	24893	.	-	0	ID=cds-J4731_07950;Parent=gene-J4731_07950;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006658079.1;locus_tag=J4731_07950;product=TonB-dependent hemoglobin/transferrin/lactoferrin family receptor;pseudo=true;transl_table=11
JAGETS010000016.1	Genbank	gene	25308	25592	.	-	.	ID=gene-J4731_07955;Name=J4731_07955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_07955
JAGETS010000016.1	Protein Homology	CDS	25308	25592	.	-	0	ID=cds-MBO1929020.1;Parent=gene-J4731_07955;Dbxref=NCBI_GP:MBO1929020.1;Name=MBO1929020.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004261695.1;locus_tag=J4731_07955;product=hemin uptake protein HemP;protein_id=MBO1929020.1;transl_table=11
JAGETS010000016.1	Genbank	pseudogene	25695	26310	.	+	.	ID=gene-J4731_07960;Name=J4731_07960;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_07960;pseudo=true
JAGETS010000016.1	Protein Homology	CDS	25695	26310	.	+	0	ID=cds-J4731_07960;Parent=gene-J4731_07960;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004261694.1;locus_tag=J4731_07960;product=NAD(P)H-binding protein;pseudo=true;transl_table=11
JAGETS010000016.1	Genbank	pseudogene	26482	27547	.	-	.	ID=gene-J4731_07965;Name=J4731_07965;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_07965;pseudo=true
JAGETS010000016.1	Protein Homology	CDS	26482	27547	.	-	0	ID=cds-J4731_07965;Parent=gene-J4731_07965;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009091804.1;locus_tag=J4731_07965;product=DUF1177 domain-containing protein;pseudo=true;transl_table=11
JAGETS010000016.1	Genbank	gene	27547	27825	.	-	.	ID=gene-J4731_07970;Name=J4731_07970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_07970
JAGETS010000016.1	Protein Homology	CDS	27547	27825	.	-	0	ID=cds-MBO1929021.1;Parent=gene-J4731_07970;Dbxref=NCBI_GP:MBO1929021.1;Name=MBO1929021.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015534.1;locus_tag=J4731_07970;product=Type 1 glutamine amidotransferase-like domain-containing protein;protein_id=MBO1929021.1;transl_table=11
JAGETS010000016.1	Genbank	gene	27822	28271	.	-	.	ID=gene-J4731_07975;Name=pepE;gbkey=Gene;gene=pepE;gene_biotype=protein_coding;locus_tag=J4731_07975
JAGETS010000016.1	Protein Homology	CDS	27822	28271	.	-	0	ID=cds-MBO1929022.1;Parent=gene-J4731_07975;Dbxref=NCBI_GP:MBO1929022.1;Name=MBO1929022.1;gbkey=CDS;gene=pepE;inference=COORDINATES: protein motif:HMM:NF003642.0;locus_tag=J4731_07975;product=dipeptidase PepE;protein_id=MBO1929022.1;transl_table=11
JAGETS010000016.1	Genbank	gene	28489	28746	.	-	.	ID=gene-J4731_07980;Name=J4731_07980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_07980
JAGETS010000016.1	Protein Homology	CDS	28489	28746	.	-	0	ID=cds-MBO1929023.1;Parent=gene-J4731_07980;Dbxref=NCBI_GP:MBO1929023.1;Name=MBO1929023.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012488.1;locus_tag=J4731_07980;product=aminotransferase class V-fold PLP-dependent enzyme;protein_id=MBO1929023.1;transl_table=11
JAGETS010000016.1	Genbank	gene	28727	29461	.	-	.	ID=gene-J4731_07985;Name=J4731_07985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_07985
JAGETS010000016.1	Protein Homology	CDS	28727	29461	.	-	0	ID=cds-MBO1929024.1;Parent=gene-J4731_07985;Dbxref=NCBI_GP:MBO1929024.1;Name=MBO1929024.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012488.1;locus_tag=J4731_07985;product=aminotransferase class V-fold PLP-dependent enzyme;protein_id=MBO1929024.1;transl_table=11
JAGETS010000016.1	Genbank	gene	29397	29879	.	-	.	ID=gene-J4731_07990;Name=J4731_07990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_07990
JAGETS010000016.1	GeneMarkS-2+	CDS	29397	29879	.	-	0	ID=cds-MBO1929025.1;Parent=gene-J4731_07990;Dbxref=NCBI_GP:MBO1929025.1;Name=MBO1929025.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_07990;product=hypothetical protein;protein_id=MBO1929025.1;transl_table=11
JAGETS010000016.1	Genbank	gene	29983	30150	.	-	.	ID=gene-J4731_07995;Name=J4731_07995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_07995
JAGETS010000016.1	GeneMarkS-2+	CDS	29983	30150	.	-	0	ID=cds-MBO1929026.1;Parent=gene-J4731_07995;Dbxref=NCBI_GP:MBO1929026.1;Name=MBO1929026.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_07995;product=hypothetical protein;protein_id=MBO1929026.1;transl_table=11
JAGETS010000016.1	Genbank	gene	30168	30503	.	-	.	ID=gene-J4731_08000;Name=J4731_08000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_08000
JAGETS010000016.1	GeneMarkS-2+	CDS	30168	30503	.	-	0	ID=cds-MBO1929027.1;Parent=gene-J4731_08000;Dbxref=NCBI_GP:MBO1929027.1;Name=MBO1929027.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_08000;product=hypothetical protein;protein_id=MBO1929027.1;transl_table=11
JAGETS010000016.1	Genbank	gene	30466	30798	.	-	.	ID=gene-J4731_08005;Name=J4731_08005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_08005
JAGETS010000016.1	GeneMarkS-2+	CDS	30466	30798	.	-	0	ID=cds-MBO1929028.1;Parent=gene-J4731_08005;Dbxref=NCBI_GP:MBO1929028.1;Name=MBO1929028.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_08005;product=hypothetical protein;protein_id=MBO1929028.1;transl_table=11
JAGETS010000016.1	Genbank	gene	31160	31375	.	-	.	ID=gene-J4731_08010;Name=J4731_08010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_08010
JAGETS010000016.1	Protein Homology	CDS	31160	31375	.	-	0	ID=cds-MBO1929029.1;Parent=gene-J4731_08010;Dbxref=NCBI_GP:MBO1929029.1;Name=MBO1929029.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013757.1;locus_tag=J4731_08010;product=hypothetical protein;protein_id=MBO1929029.1;transl_table=11
JAGETS010000016.1	Genbank	gene	31415	31675	.	-	.	ID=gene-J4731_08015;Name=J4731_08015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_08015
JAGETS010000016.1	GeneMarkS-2+	CDS	31415	31675	.	-	0	ID=cds-MBO1929030.1;Parent=gene-J4731_08015;Dbxref=NCBI_GP:MBO1929030.1;Name=MBO1929030.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_08015;product=hypothetical protein;protein_id=MBO1929030.1;transl_table=11
JAGETS010000016.1	Genbank	gene	31698	31829	.	-	.	ID=gene-J4731_08020;Name=J4731_08020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_08020
JAGETS010000016.1	Protein Homology	CDS	31698	31829	.	-	0	ID=cds-MBO1929031.1;Parent=gene-J4731_08020;Dbxref=NCBI_GP:MBO1929031.1;Name=MBO1929031.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020897.1;locus_tag=J4731_08020;product=ArsR family transcriptional regulator;protein_id=MBO1929031.1;transl_table=11
JAGETS010000016.1	Genbank	pseudogene	32360	33380	.	+	.	ID=gene-J4731_08025;Name=galE;gbkey=Gene;gene=galE;gene_biotype=pseudogene;locus_tag=J4731_08025;pseudo=true
JAGETS010000016.1	Protein Homology	CDS	32360	33380	.	+	0	ID=cds-J4731_08025;Parent=gene-J4731_08025;Note=frameshifted%3B internal stop;gbkey=CDS;gene=galE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004265179.1;locus_tag=J4731_08025;product=UDP-glucose 4-epimerase GalE;pseudo=true;transl_table=11
JAGETS010000016.1	Genbank	pseudogene	33461	34451	.	+	.	ID=gene-J4731_08030;Name=J4731_08030;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_08030;pseudo=true
JAGETS010000016.1	Protein Homology	CDS	33461	34451	.	+	0	ID=cds-J4731_08030;Parent=gene-J4731_08030;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017891952.1;locus_tag=J4731_08030;product=UDP-glucose--hexose-1-phosphate uridylyltransferase;pseudo=true;transl_table=11
JAGETS010000016.1	Genbank	pseudogene	34580	35660	.	+	.	ID=gene-J4731_08035;Name=galK;gbkey=Gene;gene=galK;gene_biotype=pseudogene;locus_tag=J4731_08035;pseudo=true
JAGETS010000016.1	Protein Homology	CDS	34580	35660	.	+	0	ID=cds-J4731_08035;Parent=gene-J4731_08035;Note=frameshifted;gbkey=CDS;gene=galK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012770563.1;locus_tag=J4731_08035;product=galactokinase;pseudo=true;transl_table=11
JAGETS010000016.1	Genbank	pseudogene	35695	36718	.	+	.	ID=gene-J4731_08040;Name=J4731_08040;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_08040;pseudo=true
JAGETS010000016.1	Protein Homology	CDS	35695	36718	.	+	0	ID=cds-J4731_08040;Parent=gene-J4731_08040;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004261681.1;locus_tag=J4731_08040;product=galactose-1-epimerase;pseudo=true;transl_table=11
JAGETS010000016.1	Genbank	pseudogene	36869	37863	.	+	.	ID=gene-J4731_08045;Name=J4731_08045;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_08045;pseudo=true
JAGETS010000016.1	Protein Homology	CDS	36869	37863	.	+	0	ID=cds-J4731_08045;Parent=gene-J4731_08045;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004261677.1;locus_tag=J4731_08045;product=substrate-binding domain-containing protein;pseudo=true;transl_table=11
JAGETS010000016.1	Genbank	pseudogene	38127	39751	.	+	.	ID=gene-J4731_08050;Name=J4731_08050;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_08050;pseudo=true
JAGETS010000016.1	Protein Homology	CDS	38127	39751	.	+	0	ID=cds-J4731_08050;Parent=gene-J4731_08050;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004243978.1;locus_tag=J4731_08050;product=sodium/sugar symporter;pseudo=true;transl_table=11
JAGETS010000016.1	Genbank	pseudogene	40035	42086	.	+	.	ID=gene-J4731_08055;Name=J4731_08055;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_08055;pseudo=true
JAGETS010000016.1	Protein Homology	CDS	40035	42086	.	+	0	ID=cds-J4731_08055;Parent=gene-J4731_08055;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004261672.1;locus_tag=J4731_08055;product=TonB-dependent siderophore receptor;pseudo=true;transl_table=11
JAGETS010000016.1	Genbank	pseudogene	42134	42911	.	+	.	ID=gene-J4731_08060;Name=J4731_08060;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_08060;pseudo=true
JAGETS010000016.1	Protein Homology	CDS	42134	42911	.	+	0	ID=cds-J4731_08060;Parent=gene-J4731_08060;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004261670.1;locus_tag=J4731_08060;product=ABC transporter ATP-binding protein;pseudo=true;transl_table=11
JAGETS010000016.1	Genbank	pseudogene	42902	43862	.	+	.	ID=gene-J4731_08065;Name=J4731_08065;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_08065;pseudo=true
JAGETS010000016.1	Protein Homology	CDS	42902	43862	.	+	0	ID=cds-J4731_08065;Parent=gene-J4731_08065;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008911008.1;locus_tag=J4731_08065;product=ABC transporter substrate-binding protein;pseudo=true;transl_table=11
JAGETS010000016.1	Genbank	gene	44150	44422	.	+	.	ID=gene-J4731_08070;Name=J4731_08070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_08070
JAGETS010000016.1	Protein Homology	CDS	44150	44422	.	+	0	ID=cds-MBO1929032.1;Parent=gene-J4731_08070;Dbxref=NCBI_GP:MBO1929032.1;Name=MBO1929032.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013219.1;locus_tag=J4731_08070;product=iron chelate uptake ABC transporter family permease subunit;protein_id=MBO1929032.1;transl_table=11
JAGETS010000016.1	Genbank	gene	44477	44734	.	+	.	ID=gene-J4731_08075;Name=J4731_08075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_08075
JAGETS010000016.1	Protein Homology	CDS	44477	44734	.	+	0	ID=cds-MBO1929033.1;Parent=gene-J4731_08075;Dbxref=NCBI_GP:MBO1929033.1;Name=MBO1929033.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013219.1;locus_tag=J4731_08075;product=iron chelate uptake ABC transporter family permease subunit;protein_id=MBO1929033.1;transl_table=11
JAGETS010000016.1	Genbank	gene	44891	45082	.	+	.	ID=gene-J4731_08080;Name=J4731_08080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_08080
JAGETS010000016.1	Protein Homology	CDS	44891	45082	.	+	0	ID=cds-MBO1929034.1;Parent=gene-J4731_08080;Dbxref=NCBI_GP:MBO1929034.1;Name=MBO1929034.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418708.1;locus_tag=J4731_08080;product=iron chelate uptake ABC transporter family permease subunit;protein_id=MBO1929034.1;transl_table=11
JAGETS010000016.1	Genbank	gene	45259	45525	.	+	.	ID=gene-J4731_08085;Name=J4731_08085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_08085
JAGETS010000016.1	Protein Homology	CDS	45259	45525	.	+	0	ID=cds-MBO1929035.1;Parent=gene-J4731_08085;Dbxref=NCBI_GP:MBO1929035.1;Name=MBO1929035.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013219.1;locus_tag=J4731_08085;product=iron chelate uptake ABC transporter family permease subunit;protein_id=MBO1929035.1;transl_table=11
JAGETS010000016.1	Genbank	pseudogene	45977	46943	.	-	.	ID=gene-J4731_08090;Name=J4731_08090;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_08090;pseudo=true
JAGETS010000016.1	Protein Homology	CDS	45977	46943	.	-	0	ID=cds-J4731_08090;Parent=gene-J4731_08090;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017803021.1;locus_tag=J4731_08090;product=LacI family DNA-binding transcriptional regulator;pseudo=true;transl_table=11
JAGETS010000016.1	Genbank	pseudogene	47204	48150	.	+	.	ID=gene-J4731_08095;Name=J4731_08095;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_08095;pseudo=true
JAGETS010000016.1	Protein Homology	CDS	47204	48150	.	+	0	ID=cds-J4731_08095;Parent=gene-J4731_08095;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004261661.1;locus_tag=J4731_08095;product=GNAT family N-acetyltransferase;pseudo=true;transl_table=11
JAGETS010000016.1	Genbank	pseudogene	48208	49334	.	+	.	ID=gene-J4731_08100;Name=J4731_08100;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_08100;pseudo=true
JAGETS010000016.1	Protein Homology	CDS	48208	49334	.	+	0	ID=cds-J4731_08100;Parent=gene-J4731_08100;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017894264.1;locus_tag=J4731_08100;product=MFS transporter;pseudo=true;transl_table=11
JAGETS010000016.1	Genbank	pseudogene	49356	50429	.	+	.	ID=gene-J4731_08105;Name=J4731_08105;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_08105;pseudo=true
JAGETS010000016.1	Protein Homology	CDS	49356	50429	.	+	0	ID=cds-J4731_08105;Parent=gene-J4731_08105;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004261656.1;locus_tag=J4731_08105;product=Gfo/Idh/MocA family oxidoreductase;pseudo=true;transl_table=11
JAGETS010000016.1	Genbank	pseudogene	50426	51479	.	+	.	ID=gene-J4731_08110;Name=J4731_08110;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_08110;pseudo=true
JAGETS010000016.1	Protein Homology	CDS	50426	51479	.	+	0	ID=cds-J4731_08110;Parent=gene-J4731_08110;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004261652.1;locus_tag=J4731_08110;product=sugar phosphate isomerase/epimerase;pseudo=true;transl_table=11
JAGETS010000016.1	Genbank	pseudogene	51489	52616	.	+	.	ID=gene-J4731_08115;Name=J4731_08115;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_08115;pseudo=true
JAGETS010000016.1	Protein Homology	CDS	51489	52616	.	+	0	ID=cds-J4731_08115;Parent=gene-J4731_08115;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017894261.1;locus_tag=J4731_08115;product=Gfo/Idh/MocA family oxidoreductase;pseudo=true;transl_table=11
JAGETS010000016.1	Genbank	gene	54390	55313	.	-	.	ID=gene-J4731_08120;Name=J4731_08120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_08120
JAGETS010000016.1	Protein Homology	CDS	54390	55313	.	-	0	ID=cds-MBO1929036.1;Parent=gene-J4731_08120;Dbxref=NCBI_GP:MBO1929036.1;Name=MBO1929036.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005182556.1;locus_tag=J4731_08120;product=glycosyltransferase family 2 protein;protein_id=MBO1929036.1;transl_table=11
JAGETS010000016.1	Genbank	pseudogene	55310	55673	.	-	.	ID=gene-J4731_08125;Name=J4731_08125;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_08125;pseudo=true
JAGETS010000016.1	Protein Homology	CDS	55310	55673	.	-	0	ID=cds-J4731_08125;Parent=gene-J4731_08125;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000915539.1;locus_tag=J4731_08125;product=GtrA family protein;pseudo=true;transl_table=11
JAGETS010000016.1	Genbank	gene	55759	55920	.	+	.	ID=gene-J4731_08130;Name=J4731_08130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_08130
JAGETS010000016.1	GeneMarkS-2+	CDS	55759	55920	.	+	0	ID=cds-MBO1929037.1;Parent=gene-J4731_08130;Dbxref=NCBI_GP:MBO1929037.1;Name=MBO1929037.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_08130;product=hypothetical protein;protein_id=MBO1929037.1;transl_table=11
JAGETS010000016.1	Genbank	pseudogene	55967	56295	.	-	.	ID=gene-J4731_08135;Name=J4731_08135;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_08135;pseudo=true
JAGETS010000016.1	Protein Homology	CDS	55967	56295	.	-	0	ID=cds-J4731_08135;Parent=gene-J4731_08135;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014751854.1;locus_tag=J4731_08135;product=multidrug DMT transporter;pseudo=true;transl_table=11
JAGETS010000016.1	Genbank	pseudogene	56384	57669	.	-	.	ID=gene-J4731_08140;Name=J4731_08140;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_08140;pseudo=true
JAGETS010000016.1	Protein Homology	CDS	56384	57669	.	-	0	ID=cds-J4731_08140;Parent=gene-J4731_08140;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005164727.1;locus_tag=J4731_08140;product=MFS transporter;pseudo=true;transl_table=11
JAGETS010000016.1	Genbank	pseudogene	57697	58961	.	-	.	ID=gene-J4731_08145;Name=J4731_08145;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_08145;pseudo=true
JAGETS010000016.1	Protein Homology	CDS	57697	58961	.	-	0	ID=cds-J4731_08145;Parent=gene-J4731_08145;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014656195.1;locus_tag=J4731_08145;product=MASE1 domain-containing protein;pseudo=true;transl_table=11
JAGETS010000016.1	Genbank	gene	59525	60064	.	+	.	ID=gene-J4731_08150;Name=J4731_08150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_08150
JAGETS010000016.1	GeneMarkS-2+	CDS	59525	60064	.	+	0	ID=cds-MBO1929038.1;Parent=gene-J4731_08150;Dbxref=NCBI_GP:MBO1929038.1;Name=MBO1929038.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_08150;product=hypothetical protein;protein_id=MBO1929038.1;transl_table=11
JAGETS010000016.1	Genbank	gene	60741	60935	.	+	.	ID=gene-J4731_08155;Name=J4731_08155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_08155
JAGETS010000016.1	GeneMarkS-2+	CDS	60741	60935	.	+	0	ID=cds-MBO1929039.1;Parent=gene-J4731_08155;Dbxref=NCBI_GP:MBO1929039.1;Name=MBO1929039.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_08155;product=hypothetical protein;protein_id=MBO1929039.1;transl_table=11
JAGETS010000016.1	Genbank	gene	61042	61338	.	+	.	ID=gene-J4731_08160;Name=J4731_08160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_08160
JAGETS010000016.1	Protein Homology	CDS	61042	61338	.	+	0	ID=cds-MBO1929040.1;Parent=gene-J4731_08160;Dbxref=NCBI_GP:MBO1929040.1;Name=MBO1929040.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013257.1;locus_tag=J4731_08160;product=hypothetical protein;protein_id=MBO1929040.1;transl_table=11
JAGETS010000016.1	Genbank	gene	62277	62666	.	+	.	ID=gene-J4731_08165;Name=hcp;gbkey=Gene;gene=hcp;gene_biotype=protein_coding;locus_tag=J4731_08165
JAGETS010000016.1	Protein Homology	CDS	62277	62666	.	+	0	ID=cds-MBO1929041.1;Parent=gene-J4731_08165;Dbxref=NCBI_GP:MBO1929041.1;Name=MBO1929041.1;gbkey=CDS;gene=hcp;inference=COORDINATES: protein motif:HMM:TIGR03344.1;locus_tag=J4731_08165;product=type VI secretion system tube protein Hcp;protein_id=MBO1929041.1;transl_table=11
JAGETS010000016.1	Genbank	gene	62732	63130	.	+	.	ID=gene-J4731_08170;Name=J4731_08170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_08170
JAGETS010000016.1	GeneMarkS-2+	CDS	62732	63130	.	+	0	ID=cds-MBO1929042.1;Parent=gene-J4731_08170;Dbxref=NCBI_GP:MBO1929042.1;Name=MBO1929042.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_08170;product=hypothetical protein;protein_id=MBO1929042.1;transl_table=11
JAGETS010000016.1	Genbank	gene	65083	65502	.	-	.	ID=gene-J4731_08175;Name=J4731_08175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_08175
JAGETS010000016.1	GeneMarkS-2+	CDS	65083	65502	.	-	0	ID=cds-MBO1929043.1;Parent=gene-J4731_08175;Dbxref=NCBI_GP:MBO1929043.1;Name=MBO1929043.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_08175;product=hypothetical protein;protein_id=MBO1929043.1;transl_table=11
JAGETS010000016.1	Genbank	pseudogene	65815	66444	.	-	.	ID=gene-J4731_08180;Name=uraD;gbkey=Gene;gene=uraD;gene_biotype=pseudogene;locus_tag=J4731_08180;pseudo=true
JAGETS010000016.1	Protein Homology	CDS	65815	66444	.	-	0	ID=cds-J4731_08180;Parent=gene-J4731_08180;Note=frameshifted%3B internal stop;gbkey=CDS;gene=uraD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004261568.1;locus_tag=J4731_08180;product=2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase;pseudo=true;transl_table=11
JAGETS010000016.1	Genbank	pseudogene	66545	67328	.	-	.	ID=gene-J4731_08185;Name=J4731_08185;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_08185;pseudo=true
JAGETS010000016.1	Protein Homology	CDS	66545	67328	.	-	0	ID=cds-J4731_08185;Parent=gene-J4731_08185;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006661233.1;locus_tag=J4731_08185;product=(S)-ureidoglycine aminohydrolase;pseudo=true;transl_table=11
JAGETS010000016.1	Genbank	pseudogene	67386	68610	.	-	.	ID=gene-J4731_08190;Name=allC;gbkey=Gene;gene=allC;gene_biotype=pseudogene;locus_tag=J4731_08190;pseudo=true
JAGETS010000016.1	Protein Homology	CDS	67386	68610	.	-	0	ID=cds-J4731_08190;Parent=gene-J4731_08190;Note=frameshifted;gbkey=CDS;gene=allC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019454127.1;locus_tag=J4731_08190;product=allantoate deiminase;pseudo=true;transl_table=11
JAGETS010000016.1	Genbank	pseudogene	68844	69881	.	-	.	ID=gene-J4731_08195;Name=allD;gbkey=Gene;gene=allD;gene_biotype=pseudogene;locus_tag=J4731_08195;pseudo=true
JAGETS010000016.1	Protein Homology	CDS	68844	69881	.	-	0	ID=cds-J4731_08195;Parent=gene-J4731_08195;Note=frameshifted%3B internal stop;gbkey=CDS;gene=allD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015376901.1;locus_tag=J4731_08195;product=ureidoglycolate dehydrogenase;pseudo=true;transl_table=11
JAGETS010000016.1	Genbank	pseudogene	70284	71888	.	+	.	ID=gene-J4731_08200;Name=fdrA;gbkey=Gene;gene=fdrA;gene_biotype=pseudogene;locus_tag=J4731_08200;pseudo=true
JAGETS010000016.1	Protein Homology	CDS	70284	71888	.	+	0	ID=cds-J4731_08200;Parent=gene-J4731_08200;Note=frameshifted;gbkey=CDS;gene=fdrA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004097214.1;locus_tag=J4731_08200;product=acyl-CoA synthetase FdrA;pseudo=true;transl_table=11
JAGETS010000016.1	Genbank	pseudogene	71899	73128	.	+	.	ID=gene-J4731_08205;Name=J4731_08205;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_08205;pseudo=true
JAGETS010000016.1	Protein Homology	CDS	71899	73128	.	+	0	ID=cds-J4731_08205;Parent=gene-J4731_08205;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000495326.1;locus_tag=J4731_08205;product=DUF1116 domain-containing protein;pseudo=true;transl_table=11
JAGETS010000016.1	Genbank	pseudogene	73180	73987	.	+	.	ID=gene-J4731_08210;Name=J4731_08210;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_08210;pseudo=true
JAGETS010000016.1	Protein Homology	CDS	73180	73987	.	+	0	ID=cds-J4731_08210;Parent=gene-J4731_08210;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006661238.1;locus_tag=J4731_08210;product=DUF2877 domain-containing protein;pseudo=true;transl_table=11
JAGETS010000016.1	Genbank	pseudogene	74013	74910	.	+	.	ID=gene-J4731_08215;Name=J4731_08215;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_08215;pseudo=true
JAGETS010000016.1	Protein Homology	CDS	74013	74910	.	+	0	ID=cds-J4731_08215;Parent=gene-J4731_08215;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004261549.1;locus_tag=J4731_08215;product=carbamate kinase;pseudo=true;transl_table=11
JAGETS010000016.1	Genbank	pseudogene	74944	75778	.	+	.	ID=gene-J4731_08220;Name=J4731_08220;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_08220;pseudo=true
JAGETS010000016.1	Protein Homology	CDS	74944	75778	.	+	0	ID=cds-J4731_08220;Parent=gene-J4731_08220;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006661240.1;locus_tag=J4731_08220;product=aldo/keto reductase;pseudo=true;transl_table=11
JAGETS010000016.1	Genbank	pseudogene	75790	76695	.	-	.	ID=gene-J4731_08225;Name=allS;gbkey=Gene;gene=allS;gene_biotype=pseudogene;locus_tag=J4731_08225;pseudo=true
JAGETS010000016.1	Protein Homology	CDS	75790	76695	.	-	0	ID=cds-J4731_08225;Parent=gene-J4731_08225;Note=frameshifted;gbkey=CDS;gene=allS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004261545.1;locus_tag=J4731_08225;product=HTH-type transcriptional activator AllS;pseudo=true;transl_table=11
JAGETS010000016.1	Genbank	pseudogene	77015	77511	.	+	.	ID=gene-J4731_08230;Name=J4731_08230;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_08230;pseudo=true
JAGETS010000016.1	Protein Homology	CDS	77015	77511	.	+	0	ID=cds-J4731_08230;Parent=gene-J4731_08230;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006661241.1;locus_tag=J4731_08230;product=ureidoglycolate lyase;pseudo=true;transl_table=11
JAGETS010000016.1	Genbank	pseudogene	77566	78374	.	+	.	ID=gene-J4731_08235;Name=J4731_08235;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_08235;pseudo=true
JAGETS010000016.1	Protein Homology	CDS	77566	78374	.	+	0	ID=cds-J4731_08235;Parent=gene-J4731_08235;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000141283.1;locus_tag=J4731_08235;product=helix-turn-helix domain-containing protein;pseudo=true;transl_table=11
JAGETS010000016.1	Genbank	pseudogene	78547	80279	.	+	.	ID=gene-J4731_08240;Name=gcl;gbkey=Gene;gene=gcl;gene_biotype=pseudogene;locus_tag=J4731_08240;pseudo=true
JAGETS010000016.1	Protein Homology	CDS	78547	80279	.	+	0	ID=cds-J4731_08240;Parent=gene-J4731_08240;Note=frameshifted%3B internal stop;gbkey=CDS;gene=gcl;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014411519.1;locus_tag=J4731_08240;product=glyoxylate carboligase;pseudo=true;transl_table=11
JAGETS010000016.1	Genbank	pseudogene	80334	81106	.	+	.	ID=gene-J4731_08245;Name=hyi;gbkey=Gene;gene=hyi;gene_biotype=pseudogene;locus_tag=J4731_08245;pseudo=true
JAGETS010000016.1	Protein Homology	CDS	80334	81106	.	+	0	ID=cds-J4731_08245;Parent=gene-J4731_08245;Note=frameshifted%3B internal stop;gbkey=CDS;gene=hyi;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004261532.1;locus_tag=J4731_08245;product=hydroxypyruvate isomerase;pseudo=true;transl_table=11
JAGETS010000016.1	Genbank	pseudogene	81161	81988	.	+	.	ID=gene-J4731_08250;Name=J4731_08250;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_08250;pseudo=true
JAGETS010000016.1	Protein Homology	CDS	81161	81988	.	+	0	ID=cds-J4731_08250;Parent=gene-J4731_08250;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415042.1;locus_tag=J4731_08250;product=2-hydroxy-3-oxopropionate reductase;pseudo=true;transl_table=11
JAGETS010000016.1	Genbank	pseudogene	82174	83458	.	-	.	ID=gene-J4731_08255;Name=J4731_08255;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_08255;pseudo=true
JAGETS010000016.1	Protein Homology	CDS	82174	83458	.	-	0	ID=cds-J4731_08255;Parent=gene-J4731_08255;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006661246.1;locus_tag=J4731_08255;product=uracil/xanthine transporter;pseudo=true;transl_table=11
JAGETS010000016.1	Genbank	pseudogene	83523	84873	.	-	.	ID=gene-J4731_08260;Name=allB;gbkey=Gene;gene=allB;gene_biotype=pseudogene;locus_tag=J4731_08260;pseudo=true
JAGETS010000016.1	Protein Homology	CDS	83523	84873	.	-	0	ID=cds-J4731_08260;Parent=gene-J4731_08260;Note=frameshifted;gbkey=CDS;gene=allB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013573644.1;locus_tag=J4731_08260;product=allantoinase AllB;pseudo=true;transl_table=11
JAGETS010000016.1	Genbank	pseudogene	85036	86448	.	-	.	ID=gene-J4731_08265;Name=J4731_08265;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_08265;pseudo=true
JAGETS010000016.1	Protein Homology	CDS	85036	86448	.	-	0	ID=cds-J4731_08265;Parent=gene-J4731_08265;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003831095.1;locus_tag=J4731_08265;product=putative allantoin permease;pseudo=true;transl_table=11
JAGETS010000016.1	Genbank	pseudogene	87218	88358	.	+	.	ID=gene-J4731_08270;Name=J4731_08270;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_08270;pseudo=true
JAGETS010000016.1	Protein Homology	CDS	87218	88358	.	+	0	ID=cds-J4731_08270;Parent=gene-J4731_08270;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004925860.1;locus_tag=J4731_08270;product=glycerate kinase;pseudo=true;transl_table=11
JAGETS010000016.1	Genbank	gene	88410	88550	.	+	.	ID=gene-J4731_08275;Name=J4731_08275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_08275
JAGETS010000016.1	GeneMarkS-2+	CDS	88410	88550	.	+	0	ID=cds-MBO1929044.1;Parent=gene-J4731_08275;Dbxref=NCBI_GP:MBO1929044.1;Name=MBO1929044.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_08275;product=hypothetical protein;protein_id=MBO1929044.1;transl_table=11
JAGETS010000016.1	Genbank	pseudogene	88709	88976	.	+	.	ID=gene-J4731_08280;Name=J4731_08280;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_08280;pseudo=true
JAGETS010000016.1	Protein Homology	CDS	88709	88976	.	+	0	ID=cds-J4731_08280;Parent=gene-J4731_08280;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006658978.1;locus_tag=J4731_08280;product=hypothetical protein;pseudo=true;transl_table=11
JAGETS010000016.1	Genbank	pseudogene	88989	89720	.	+	.	ID=gene-J4731_08285;Name=J4731_08285;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_08285;pseudo=true
JAGETS010000016.1	Protein Homology	CDS	88989	89720	.	+	0	ID=cds-J4731_08285;Parent=gene-J4731_08285;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006658974.1;locus_tag=J4731_08285;product=antitermination protein;pseudo=true;transl_table=11
JAGETS010000016.1	Genbank	pseudogene	89882	90431	.	+	.	ID=gene-J4731_08290;Name=J4731_08290;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_08290;pseudo=true
JAGETS010000016.1	Protein Homology	CDS	89882	90431	.	+	0	ID=cds-J4731_08290;Parent=gene-J4731_08290;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004261499.1;locus_tag=J4731_08290;product=DUF1440 domain-containing protein;pseudo=true;transl_table=11
JAGETS010000016.1	Genbank	gene	90792	90959	.	+	.	ID=gene-J4731_08295;Name=J4731_08295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_08295
JAGETS010000016.1	GeneMarkS-2+	CDS	90792	90959	.	+	0	ID=cds-MBO1929045.1;Parent=gene-J4731_08295;Dbxref=NCBI_GP:MBO1929045.1;Name=MBO1929045.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_08295;product=hypothetical protein;protein_id=MBO1929045.1;transl_table=11
JAGETS010000016.1	Genbank	gene	90956	91150	.	+	.	ID=gene-J4731_08300;Name=J4731_08300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_08300
JAGETS010000016.1	GeneMarkS-2+	CDS	90956	91150	.	+	0	ID=cds-MBO1929046.1;Parent=gene-J4731_08300;Dbxref=NCBI_GP:MBO1929046.1;Name=MBO1929046.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_08300;product=hypothetical protein;protein_id=MBO1929046.1;transl_table=11
JAGETS010000016.1	Genbank	pseudogene	91348	91647	.	-	.	ID=gene-J4731_08305;Name=J4731_08305;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_08305;pseudo=true
JAGETS010000016.1	Protein Homology	CDS	91348	91647	.	-	0	ID=cds-J4731_08305;Parent=gene-J4731_08305;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004917262.1;locus_tag=J4731_08305;product=acid-resistance protein;pseudo=true;transl_table=11
JAGETS010000016.1	Genbank	pseudogene	92111	92629	.	+	.	ID=gene-J4731_08310;Name=J4731_08310;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_08310;pseudo=true
JAGETS010000016.1	Protein Homology	CDS	92111	92629	.	+	0	ID=cds-J4731_08310;Parent=gene-J4731_08310;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004261490.1;locus_tag=J4731_08310;product=DUF1440 domain-containing protein;pseudo=true;transl_table=11
JAGETS010000016.1	Genbank	pseudogene	92890	93279	.	+	.	ID=gene-J4731_08315;Name=J4731_08315;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_08315;pseudo=true
JAGETS010000016.1	Protein Homology	CDS	92890	93279	.	+	0	ID=cds-J4731_08315;Parent=gene-J4731_08315;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004261489.1;locus_tag=J4731_08315;product=YgiW/YdeI family stress tolerance OB fold protein;pseudo=true;transl_table=11
JAGETS010000016.1	Genbank	gene	93360	93563	.	-	.	ID=gene-J4731_08320;Name=J4731_08320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_08320
JAGETS010000016.1	Protein Homology	CDS	93360	93563	.	-	0	ID=cds-MBO1929047.1;Parent=gene-J4731_08320;Dbxref=NCBI_GP:MBO1929047.1;Name=MBO1929047.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004261484.1;locus_tag=J4731_08320;product=thiamine biosynthesis protein ApbE;protein_id=MBO1929047.1;transl_table=11
JAGETS010000016.1	Genbank	gene	93616	93867	.	+	.	ID=gene-J4731_08325;Name=J4731_08325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_08325
JAGETS010000016.1	GeneMarkS-2+	CDS	93616	93867	.	+	0	ID=cds-MBO1929048.1;Parent=gene-J4731_08325;Dbxref=NCBI_GP:MBO1929048.1;Name=MBO1929048.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_08325;product=hypothetical protein;protein_id=MBO1929048.1;transl_table=11
JAGETS010000016.1	Genbank	pseudogene	93895	94343	.	+	.	ID=gene-J4731_08330;Name=J4731_08330;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_08330;pseudo=true
JAGETS010000016.1	Protein Homology	CDS	93895	94343	.	+	0	ID=cds-J4731_08330;Parent=gene-J4731_08330;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004261480.1;locus_tag=J4731_08330;product=lysis protein;pseudo=true;transl_table=11
JAGETS010000016.1	Genbank	pseudogene	95160	97030	.	+	.	ID=gene-J4731_08335;Name=gss;gbkey=Gene;gene=gss;gene_biotype=pseudogene;locus_tag=J4731_08335;pseudo=true
JAGETS010000016.1	Protein Homology	CDS	95160	97030	.	+	0	ID=cds-J4731_08335;Parent=gene-J4731_08335;Note=frameshifted%3B internal stop;gbkey=CDS;gene=gss;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005295213.1;locus_tag=J4731_08335;product=bifunctional glutathionylspermidine amidase/synthase;pseudo=true;transl_table=11
JAGETS010000016.1	Genbank	gene	97364	97483	.	-	.	ID=gene-J4731_08340;Name=J4731_08340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_08340
JAGETS010000016.1	Protein Homology	CDS	97364	97483	.	-	0	ID=cds-MBO1929049.1;Parent=gene-J4731_08340;Dbxref=NCBI_GP:MBO1929049.1;Name=MBO1929049.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004160172.1;locus_tag=J4731_08340;product=entericidin A/B family lipoprotein;protein_id=MBO1929049.1;transl_table=11
JAGETS010000016.1	Genbank	pseudogene	97877	98375	.	+	.	ID=gene-J4731_08345;Name=J4731_08345;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_08345;pseudo=true
JAGETS010000016.1	Protein Homology	CDS	97877	98375	.	+	0	ID=cds-J4731_08345;Parent=gene-J4731_08345;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224879.1;locus_tag=J4731_08345;product=lipocalin family protein;pseudo=true;transl_table=11
JAGETS010000016.1	Genbank	gene	98726	98905	.	+	.	ID=gene-J4731_08350;Name=J4731_08350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_08350
JAGETS010000016.1	GeneMarkS-2+	CDS	98726	98905	.	+	0	ID=cds-MBO1929050.1;Parent=gene-J4731_08350;Dbxref=NCBI_GP:MBO1929050.1;Name=MBO1929050.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_08350;product=hypothetical protein;protein_id=MBO1929050.1;transl_table=11
JAGETS010000016.1	Genbank	gene	98893	99372	.	+	.	ID=gene-J4731_08355;Name=J4731_08355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_08355
JAGETS010000016.1	Protein Homology	CDS	98893	99372	.	+	0	ID=cds-MBO1929051.1;Parent=gene-J4731_08355;Dbxref=NCBI_GP:MBO1929051.1;Name=MBO1929051.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020387.1;locus_tag=J4731_08355;product=RES domain-containing protein;protein_id=MBO1929051.1;transl_table=11
JAGETS010000016.1	Genbank	gene	101404	101703	.	+	.	ID=gene-J4731_08360;Name=J4731_08360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_08360
JAGETS010000016.1	GeneMarkS-2+	CDS	101404	101703	.	+	0	ID=cds-MBO1929052.1;Parent=gene-J4731_08360;Dbxref=NCBI_GP:MBO1929052.1;Name=MBO1929052.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_08360;product=hypothetical protein;protein_id=MBO1929052.1;transl_table=11
JAGETS010000016.1	Genbank	gene	102005	102517	.	+	.	ID=gene-J4731_08365;Name=J4731_08365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_08365
JAGETS010000016.1	GeneMarkS-2+	CDS	102005	102517	.	+	0	ID=cds-MBO1929053.1;Parent=gene-J4731_08365;Dbxref=NCBI_GP:MBO1929053.1;Name=MBO1929053.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_08365;product=hypothetical protein;protein_id=MBO1929053.1;transl_table=11
JAGETS010000016.1	Genbank	gene	102532	102711	.	+	.	ID=gene-J4731_08370;Name=J4731_08370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_08370
JAGETS010000016.1	GeneMarkS-2+	CDS	102532	102711	.	+	0	ID=cds-MBO1929054.1;Parent=gene-J4731_08370;Dbxref=NCBI_GP:MBO1929054.1;Name=MBO1929054.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_08370;product=hypothetical protein;protein_id=MBO1929054.1;transl_table=11
JAGETS010000016.1	Genbank	gene	102752	103195	.	-	.	ID=gene-J4731_08375;Name=J4731_08375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_08375
JAGETS010000016.1	GeneMarkS-2+	CDS	102752	103195	.	-	0	ID=cds-MBO1929055.1;Parent=gene-J4731_08375;Dbxref=NCBI_GP:MBO1929055.1;Name=MBO1929055.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_08375;product=hypothetical protein;protein_id=MBO1929055.1;transl_table=11
JAGETS010000016.1	Genbank	gene	103234	103866	.	-	.	ID=gene-J4731_08380;Name=J4731_08380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_08380
JAGETS010000016.1	GeneMarkS-2+	CDS	103234	103866	.	-	0	ID=cds-MBO1929056.1;Parent=gene-J4731_08380;Dbxref=NCBI_GP:MBO1929056.1;Name=MBO1929056.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_08380;product=hypothetical protein;protein_id=MBO1929056.1;transl_table=11
JAGETS010000016.1	Genbank	gene	104478	104711	.	-	.	ID=gene-J4731_08385;Name=J4731_08385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_08385
JAGETS010000016.1	GeneMarkS-2+	CDS	104478	104711	.	-	0	ID=cds-MBO1929057.1;Parent=gene-J4731_08385;Dbxref=NCBI_GP:MBO1929057.1;Name=MBO1929057.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_08385;product=hypothetical protein;protein_id=MBO1929057.1;transl_table=11
JAGETS010000016.1	Genbank	gene	105213	105605	.	-	.	ID=gene-J4731_08390;Name=J4731_08390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_08390
JAGETS010000016.1	GeneMarkS-2+	CDS	105213	105605	.	-	0	ID=cds-MBO1929058.1;Parent=gene-J4731_08390;Dbxref=NCBI_GP:MBO1929058.1;Name=MBO1929058.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_08390;product=hypothetical protein;protein_id=MBO1929058.1;transl_table=11
JAGETS010000016.1	Genbank	gene	106114	106551	.	-	.	ID=gene-J4731_08395;Name=J4731_08395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_08395
JAGETS010000016.1	GeneMarkS-2+	CDS	106114	106551	.	-	0	ID=cds-MBO1929059.1;Parent=gene-J4731_08395;Dbxref=NCBI_GP:MBO1929059.1;Name=MBO1929059.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_08395;product=hypothetical protein;protein_id=MBO1929059.1;transl_table=11
JAGETS010000016.1	Genbank	gene	106849	107241	.	-	.	ID=gene-J4731_08400;Name=J4731_08400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_08400
JAGETS010000016.1	Protein Homology	CDS	106849	107241	.	-	0	ID=cds-MBO1929060.1;Parent=gene-J4731_08400;Dbxref=NCBI_GP:MBO1929060.1;Name=MBO1929060.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006662517.1;locus_tag=J4731_08400;product=DUF932 domain-containing protein;protein_id=MBO1929060.1;transl_table=11
JAGETS010000016.1	Genbank	pseudogene	107389	108400	.	-	.	ID=gene-J4731_08405;Name=J4731_08405;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_08405;pseudo=true
JAGETS010000016.1	Protein Homology	CDS	107389	108400	.	-	0	ID=cds-J4731_08405;Parent=gene-J4731_08405;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004261448.1;locus_tag=J4731_08405;product=site-specific integrase;pseudo=true;transl_table=11
JAGETS010000016.1	Genbank	gene	108390	108641	.	-	.	ID=gene-J4731_08410;Name=J4731_08410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_08410
JAGETS010000016.1	GeneMarkS-2+	CDS	108390	108641	.	-	0	ID=cds-MBO1929061.1;Parent=gene-J4731_08410;Dbxref=NCBI_GP:MBO1929061.1;Name=MBO1929061.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_08410;product=hypothetical protein;protein_id=MBO1929061.1;transl_table=11
JAGETS010000016.1	Genbank	gene	108698	108916	.	-	.	ID=gene-J4731_08415;Name=J4731_08415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_08415
JAGETS010000016.1	Protein Homology	CDS	108698	108916	.	-	0	ID=cds-MBO1929062.1;Parent=gene-J4731_08415;Dbxref=NCBI_GP:MBO1929062.1;Name=MBO1929062.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012798.1;locus_tag=J4731_08415;product=tyrosine-type recombinase/integrase;protein_id=MBO1929062.1;transl_table=11
JAGETS010000016.1	Genbank	gene	109137	109355	.	-	.	ID=gene-J4731_08420;Name=J4731_08420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_08420
JAGETS010000016.1	GeneMarkS-2+	CDS	109137	109355	.	-	0	ID=cds-MBO1929063.1;Parent=gene-J4731_08420;Dbxref=NCBI_GP:MBO1929063.1;Name=MBO1929063.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_08420;product=hypothetical protein;protein_id=MBO1929063.1;transl_table=11
JAGETS010000016.1	Genbank	gene	109352	109606	.	-	.	ID=gene-J4731_08425;Name=J4731_08425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_08425
JAGETS010000016.1	Protein Homology	CDS	109352	109606	.	-	0	ID=cds-MBO1929064.1;Parent=gene-J4731_08425;Dbxref=NCBI_GP:MBO1929064.1;Name=MBO1929064.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012798.1;locus_tag=J4731_08425;product=tyrosine-type recombinase/integrase;protein_id=MBO1929064.1;transl_table=11
JAGETS010000016.1	Genbank	gene	109731	110018	.	-	.	ID=gene-J4731_08430;Name=J4731_08430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_08430
JAGETS010000016.1	Protein Homology	CDS	109731	110018	.	-	0	ID=cds-MBO1929065.1;Parent=gene-J4731_08430;Dbxref=NCBI_GP:MBO1929065.1;Name=MBO1929065.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012798.1;locus_tag=J4731_08430;product=tyrosine-type recombinase/integrase;protein_id=MBO1929065.1;transl_table=11
JAGETS010000016.1	Genbank	pseudogene	110760	111177	.	-	.	ID=gene-J4731_08435;Name=J4731_08435;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_08435;pseudo=true
JAGETS010000016.1	Protein Homology	CDS	110760	111177	.	-	0	ID=cds-J4731_08435;Parent=gene-J4731_08435;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414786.4;locus_tag=J4731_08435;product=DUF932 domain-containing protein;pseudo=true;transl_table=11
JAGETS010000016.1	Genbank	pseudogene	111235	111626	.	-	.	ID=gene-J4731_08440;Name=J4731_08440;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_08440;pseudo=true
JAGETS010000016.1	Protein Homology	CDS	111235	111626	.	-	0	ID=cds-J4731_08440;Parent=gene-J4731_08440;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006662751.1;locus_tag=J4731_08440;product=antirestriction protein;pseudo=true;transl_table=11
JAGETS010000016.1	Genbank	pseudogene	111739	111942	.	-	.	ID=gene-J4731_08445;Name=J4731_08445;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_08445;pseudo=true
JAGETS010000016.1	Protein Homology	CDS	111739	111942	.	-	0	ID=cds-J4731_08445;Parent=gene-J4731_08445;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004261412.1;locus_tag=J4731_08445;product=hypothetical protein;pseudo=true;transl_table=11
JAGETS010000016.1	Genbank	pseudogene	112000	113054	.	-	.	ID=gene-J4731_08450;Name=J4731_08450;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_08450;pseudo=true
JAGETS010000016.1	Protein Homology	CDS	112000	113054	.	-	0	ID=cds-J4731_08450;Parent=gene-J4731_08450;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004261407.1;locus_tag=J4731_08450;product=hypothetical protein;pseudo=true;transl_table=11
JAGETS010000016.1	Genbank	pseudogene	113051	113718	.	-	.	ID=gene-J4731_08455;Name=J4731_08455;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_08455;pseudo=true
JAGETS010000016.1	Protein Homology	CDS	113051	113718	.	-	0	ID=cds-J4731_08455;Parent=gene-J4731_08455;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004261405.1;locus_tag=J4731_08455;product=WYL domain-containing protein;pseudo=true;transl_table=11
JAGETS010000016.1	Genbank	pseudogene	113732	114497	.	-	.	ID=gene-J4731_08460;Name=J4731_08460;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_08460;pseudo=true
JAGETS010000016.1	Protein Homology	CDS	113732	114497	.	-	0	ID=cds-J4731_08460;Parent=gene-J4731_08460;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004258857.1;locus_tag=J4731_08460;product=DUF3944 domain-containing protein;pseudo=true;transl_table=11
JAGETS010000016.1	Genbank	pseudogene	114901	116333	.	+	.	ID=gene-J4731_08465;Name=J4731_08465;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_08465;pseudo=true
JAGETS010000016.1	Protein Homology	CDS	114901	116333	.	+	0	ID=cds-J4731_08465;Parent=gene-J4731_08465;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012006206.1;locus_tag=J4731_08465;product=DUF3987 domain-containing protein;pseudo=true;transl_table=11
JAGETS010000016.1	Genbank	pseudogene	116730	117313	.	+	.	ID=gene-J4731_08470;Name=J4731_08470;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_08470;pseudo=true
JAGETS010000016.1	Protein Homology	CDS	116730	117313	.	+	0	ID=cds-J4731_08470;Parent=gene-J4731_08470;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001164521.1;locus_tag=J4731_08470;product=inovirus Gp2 family protein;pseudo=true;transl_table=11
JAGETS010000016.1	Genbank	gene	118500	118670	.	+	.	ID=gene-J4731_08475;Name=J4731_08475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_08475
JAGETS010000016.1	Protein Homology	CDS	118500	118670	.	+	0	ID=cds-MBO1929066.1;Parent=gene-J4731_08475;Dbxref=NCBI_GP:MBO1929066.1;Name=MBO1929066.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017717.1;locus_tag=J4731_08475;product=AlpA family phage regulatory protein;protein_id=MBO1929066.1;transl_table=11
JAGETS010000016.1	Genbank	gene	118988	119329	.	-	.	ID=gene-J4731_08480;Name=J4731_08480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_08480
JAGETS010000016.1	GeneMarkS-2+	CDS	118988	119329	.	-	0	ID=cds-MBO1929067.1;Parent=gene-J4731_08480;Dbxref=NCBI_GP:MBO1929067.1;Name=MBO1929067.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_08480;product=hypothetical protein;protein_id=MBO1929067.1;transl_table=11
JAGETS010000016.1	Genbank	pseudogene	119753	121294	.	+	.	ID=gene-J4731_08485;Name=J4731_08485;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_08485;pseudo=true
JAGETS010000016.1	Protein Homology	CDS	119753	121294	.	+	0	ID=cds-J4731_08485;Parent=gene-J4731_08485;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012907487.1;locus_tag=J4731_08485;product=SAM-dependent DNA methyltransferase;pseudo=true;transl_table=11
JAGETS010000016.1	Genbank	pseudogene	121487	121771	.	+	.	ID=gene-J4731_08490;Name=J4731_08490;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_08490;pseudo=true
JAGETS010000016.1	Protein Homology	CDS	121487	121771	.	+	0	ID=cds-J4731_08490;Parent=gene-J4731_08490;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016233787.1;locus_tag=J4731_08490;product=SAM-dependent DNA methyltransferase;pseudo=true;transl_table=11
JAGETS010000016.1	Genbank	gene	121826	122014	.	+	.	ID=gene-J4731_08495;Name=J4731_08495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_08495
JAGETS010000016.1	GeneMarkS-2+	CDS	121826	122014	.	+	0	ID=cds-MBO1929068.1;Parent=gene-J4731_08495;Dbxref=NCBI_GP:MBO1929068.1;Name=MBO1929068.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_08495;product=hypothetical protein;protein_id=MBO1929068.1;transl_table=11
JAGETS010000016.1	Genbank	gene	122509	123072	.	+	.	ID=gene-J4731_08500;Name=J4731_08500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_08500
JAGETS010000016.1	Protein Homology	CDS	122509	123072	.	+	0	ID=cds-MBO1929069.1;Parent=gene-J4731_08500;Dbxref=NCBI_GP:MBO1929069.1;Name=MBO1929069.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013579.1;locus_tag=J4731_08500;product=restriction endonuclease subunit S;protein_id=MBO1929069.1;transl_table=11
JAGETS010000016.1	Genbank	gene	123226	124050	.	+	.	ID=gene-J4731_08505;Name=J4731_08505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_08505
JAGETS010000016.1	Protein Homology	CDS	123226	124050	.	+	0	ID=cds-MBO1929070.1;Parent=gene-J4731_08505;Dbxref=NCBI_GP:MBO1929070.1;Name=MBO1929070.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020442.1;locus_tag=J4731_08505;product=FRG domain-containing protein;protein_id=MBO1929070.1;transl_table=11
JAGETS010000016.1	Genbank	pseudogene	124086	127258	.	+	.	ID=gene-J4731_08510;Name=J4731_08510;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_08510;pseudo=true
JAGETS010000016.1	Protein Homology	CDS	124086	127258	.	+	0	ID=cds-J4731_08510;Parent=gene-J4731_08510;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000061339.1;locus_tag=J4731_08510;product=type I restriction endonuclease subunit R;pseudo=true;transl_table=11
JAGETS010000016.1	Genbank	gene	127394	127624	.	+	.	ID=gene-J4731_08515;Name=J4731_08515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_08515
JAGETS010000016.1	Protein Homology	CDS	127394	127624	.	+	0	ID=cds-MBO1929071.1;Parent=gene-J4731_08515;Dbxref=NCBI_GP:MBO1929071.1;Name=MBO1929071.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020457338.1;locus_tag=J4731_08515;product=hypothetical protein;protein_id=MBO1929071.1;transl_table=11
JAGETS010000016.1	Genbank	gene	128382	128561	.	+	.	ID=gene-J4731_08520;Name=J4731_08520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_08520
JAGETS010000016.1	GeneMarkS-2+	CDS	128382	128561	.	+	0	ID=cds-MBO1929072.1;Parent=gene-J4731_08520;Dbxref=NCBI_GP:MBO1929072.1;Name=MBO1929072.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_08520;product=hypothetical protein;protein_id=MBO1929072.1;transl_table=11
JAGETS010000016.1	Genbank	gene	129601	129867	.	+	.	ID=gene-J4731_08525;Name=J4731_08525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_08525
JAGETS010000016.1	GeneMarkS-2+	CDS	129601	129867	.	+	0	ID=cds-MBO1929073.1;Parent=gene-J4731_08525;Dbxref=NCBI_GP:MBO1929073.1;Name=MBO1929073.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_08525;product=hypothetical protein;protein_id=MBO1929073.1;transl_table=11
JAGETS010000016.1	Genbank	gene	130033	130569	.	+	.	ID=gene-J4731_08530;Name=J4731_08530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_08530
JAGETS010000016.1	GeneMarkS-2+	CDS	130033	130569	.	+	0	ID=cds-MBO1929074.1;Parent=gene-J4731_08530;Dbxref=NCBI_GP:MBO1929074.1;Name=MBO1929074.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_08530;product=hypothetical protein;protein_id=MBO1929074.1;transl_table=11
JAGETS010000016.1	Genbank	gene	130989	131189	.	+	.	ID=gene-J4731_08535;Name=J4731_08535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_08535
JAGETS010000016.1	GeneMarkS-2+	CDS	130989	131189	.	+	0	ID=cds-MBO1929075.1;Parent=gene-J4731_08535;Dbxref=NCBI_GP:MBO1929075.1;Name=MBO1929075.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_08535;product=hypothetical protein;protein_id=MBO1929075.1;transl_table=11
JAGETS010000016.1	Genbank	gene	132860	133159	.	-	.	ID=gene-J4731_08540;Name=J4731_08540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_08540
JAGETS010000016.1	GeneMarkS-2+	CDS	132860	133159	.	-	0	ID=cds-MBO1929076.1;Parent=gene-J4731_08540;Dbxref=NCBI_GP:MBO1929076.1;Name=MBO1929076.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_08540;product=hypothetical protein;protein_id=MBO1929076.1;transl_table=11
JAGETS010000016.1	Genbank	gene	133320	133523	.	-	.	ID=gene-J4731_08545;Name=J4731_08545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_08545
JAGETS010000016.1	GeneMarkS-2+	CDS	133320	133523	.	-	0	ID=cds-MBO1929077.1;Parent=gene-J4731_08545;Dbxref=NCBI_GP:MBO1929077.1;Name=MBO1929077.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_08545;product=hypothetical protein;protein_id=MBO1929077.1;transl_table=11
JAGETS010000016.1	Genbank	pseudogene	133756	134968	.	-	.	ID=gene-J4731_08550;Name=J4731_08550;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_08550;pseudo=true
JAGETS010000016.1	Protein Homology	CDS	133756	134968	.	-	0	ID=cds-J4731_08550;Parent=gene-J4731_08550;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417111.1;locus_tag=J4731_08550;product=tyrosine-type recombinase/integrase;pseudo=true;transl_table=11
JAGETS010000016.1	Genbank	gene	135145	135502	.	-	.	ID=gene-J4731_08555;Name=ssrA;gbkey=Gene;gene=ssrA;gene_biotype=tmRNA;locus_tag=J4731_08555
JAGETS010000016.1	cmsearch	tmRNA	135145	135502	.	-	.	ID=rna-J4731_08555;Parent=gene-J4731_08555;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=J4731_08555;product=transfer-messenger RNA
JAGETS010000016.1	cmsearch	exon	135145	135502	.	-	.	ID=exon-J4731_08555-1;Parent=rna-J4731_08555;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=J4731_08555;product=transfer-messenger RNA
JAGETS010000016.1	Genbank	pseudogene	135551	135983	.	-	.	ID=gene-J4731_08560;Name=smpB;gbkey=Gene;gene=smpB;gene_biotype=pseudogene;locus_tag=J4731_08560;pseudo=true
JAGETS010000016.1	Protein Homology	CDS	135551	135983	.	-	0	ID=cds-J4731_08560;Parent=gene-J4731_08560;Note=frameshifted;gbkey=CDS;gene=smpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311509.1;locus_tag=J4731_08560;product=SsrA-binding protein SmpB;pseudo=true;transl_table=11
JAGETS010000016.1	Genbank	pseudogene	136179	136608	.	+	.	ID=gene-J4731_08565;Name=J4731_08565;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_08565;pseudo=true
JAGETS010000016.1	Protein Homology	CDS	136179	136608	.	+	0	ID=cds-J4731_08565;Parent=gene-J4731_08565;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012146395.1;locus_tag=J4731_08565;product=ubiquinone-binding protein;pseudo=true;transl_table=11
JAGETS010000016.1	Genbank	pseudogene	136601	136896	.	+	.	ID=gene-J4731_08570;Name=J4731_08570;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_08570;pseudo=true
JAGETS010000016.1	Protein Homology	CDS	136601	136896	.	+	0	ID=cds-J4731_08570;Parent=gene-J4731_08570;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006658694.1;locus_tag=J4731_08570;product=RnfH family protein;pseudo=true;transl_table=11
JAGETS010000016.1	Genbank	pseudogene	137069	137457	.	-	.	ID=gene-J4731_08575;Name=bamE;gbkey=Gene;gene=bamE;gene_biotype=pseudogene;locus_tag=J4731_08575;pseudo=true
JAGETS010000016.1	Protein Homology	CDS	137069	137457	.	-	0	ID=cds-J4731_08575;Parent=gene-J4731_08575;Note=frameshifted;gbkey=CDS;gene=bamE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004921543.1;locus_tag=J4731_08575;product=outer membrane protein assembly factor BamE;pseudo=true;transl_table=11
JAGETS010000016.1	Genbank	pseudogene	137561	139251	.	-	.	ID=gene-J4731_08580;Name=recN;gbkey=Gene;gene=recN;gene_biotype=pseudogene;locus_tag=J4731_08580;pseudo=true
JAGETS010000016.1	Protein Homology	CDS	137561	139251	.	-	0	ID=cds-J4731_08580;Parent=gene-J4731_08580;Note=frameshifted;gbkey=CDS;gene=recN;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014656343.1;locus_tag=J4731_08580;product=DNA repair protein RecN;pseudo=true;transl_table=11
JAGETS010000016.1	Genbank	pseudogene	139269	140048	.	-	.	ID=gene-J4731_08585;Name=J4731_08585;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_08585;pseudo=true
JAGETS010000016.1	Protein Homology	CDS	139269	140048	.	-	0	ID=cds-J4731_08585;Parent=gene-J4731_08585;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011147557.1;locus_tag=J4731_08585;product=NAD(+)/NADH kinase;pseudo=true;transl_table=11
JAGETS010000016.1	Genbank	pseudogene	140458	140855	.	+	.	ID=gene-J4731_08590;Name=grpE;gbkey=Gene;gene=grpE;gene_biotype=pseudogene;locus_tag=J4731_08590;pseudo=true
JAGETS010000016.1	Protein Homology	CDS	140458	140855	.	+	0	ID=cds-J4731_08590;Parent=gene-J4731_08590;Note=frameshifted;gbkey=CDS;gene=grpE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004874607.1;locus_tag=J4731_08590;product=nucleotide exchange factor GrpE;pseudo=true;transl_table=11
JAGETS010000016.1	Genbank	pseudogene	140918	141573	.	-	.	ID=gene-J4731_08595;Name=J4731_08595;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_08595;pseudo=true
JAGETS010000016.1	Protein Homology	CDS	140918	141573	.	-	0	ID=cds-J4731_08595;Parent=gene-J4731_08595;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011147555.1;locus_tag=J4731_08595;product=uracil-DNA glycosylase;pseudo=true;transl_table=11
JAGETS010000016.1	Genbank	pseudogene	141952	142330	.	+	.	ID=gene-J4731_08600;Name=grcA;gbkey=Gene;gene=grcA;gene_biotype=pseudogene;locus_tag=J4731_08600;pseudo=true
JAGETS010000016.1	Protein Homology	CDS	141952	142330	.	+	0	ID=cds-J4731_08600;Parent=gene-J4731_08600;Note=frameshifted;gbkey=CDS;gene=grcA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007728348.1;locus_tag=J4731_08600;product=autonomous glycyl radical cofactor GrcA;pseudo=true;transl_table=11
JAGETS010000016.1	Genbank	pseudogene	142488	143919	.	+	.	ID=gene-J4731_08605;Name=J4731_08605;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_08605;pseudo=true
JAGETS010000016.1	Protein Homology	CDS	142488	143919	.	+	0	ID=cds-J4731_08605;Parent=gene-J4731_08605;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004921520.1;locus_tag=J4731_08605;product=ankyrin repeat domain-containing protein;pseudo=true;transl_table=11
JAGETS010000016.1	Genbank	pseudogene	143947	145274	.	-	.	ID=gene-J4731_08610;Name=srmB;gbkey=Gene;gene=srmB;gene_biotype=pseudogene;locus_tag=J4731_08610;pseudo=true
JAGETS010000016.1	Protein Homology	CDS	143947	145274	.	-	0	ID=cds-J4731_08610;Parent=gene-J4731_08610;Note=frameshifted;gbkey=CDS;gene=srmB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006658686.1;locus_tag=J4731_08610;product=ATP-dependent RNA helicase SrmB;pseudo=true;transl_table=11
JAGETS010000016.1	Genbank	pseudogene	145467	146665	.	-	.	ID=gene-J4731_08615;Name=gltS;gbkey=Gene;gene=gltS;gene_biotype=pseudogene;locus_tag=J4731_08615;pseudo=true
JAGETS010000016.1	Protein Homology	CDS	145467	146665	.	-	0	ID=cds-J4731_08615;Parent=gene-J4731_08615;Note=frameshifted;gbkey=CDS;gene=gltS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006814806.1;locus_tag=J4731_08615;product=sodium/glutamate symporter;pseudo=true;transl_table=11
JAGETS010000016.1	Genbank	pseudogene	147177	148099	.	-	.	ID=gene-J4731_08620;Name=hutG;gbkey=Gene;gene=hutG;gene_biotype=pseudogene;locus_tag=J4731_08620;pseudo=true
JAGETS010000016.1	Protein Homology	CDS	147177	148099	.	-	0	ID=cds-J4731_08620;Parent=gene-J4731_08620;Note=frameshifted;gbkey=CDS;gene=hutG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006658684.1;locus_tag=J4731_08620;product=formimidoylglutamase;pseudo=true;transl_table=11
JAGETS010000016.1	Genbank	pseudogene	148097	148820	.	-	.	ID=gene-J4731_08625;Name=J4731_08625;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_08625;pseudo=true
JAGETS010000016.1	Protein Homology	CDS	148097	148820	.	-	0	ID=cds-J4731_08625;Parent=gene-J4731_08625;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006814804.1;locus_tag=J4731_08625;product=IclR family transcriptional regulator;pseudo=true;transl_table=11
JAGETS010000016.1	Genbank	pseudogene	148968	149706	.	+	.	ID=gene-J4731_08630;Name=J4731_08630;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_08630;pseudo=true
JAGETS010000016.1	Protein Homology	CDS	148968	149706	.	+	0	ID=cds-J4731_08630;Parent=gene-J4731_08630;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006708402.1;locus_tag=J4731_08630;product=methyltransferase;pseudo=true;transl_table=11
JAGETS010000016.1	Genbank	pseudogene	149736	151326	.	-	.	ID=gene-J4731_08635;Name=nadB;gbkey=Gene;gene=nadB;gene_biotype=pseudogene;locus_tag=J4731_08635;pseudo=true
JAGETS010000016.1	Protein Homology	CDS	149736	151326	.	-	0	ID=cds-J4731_08635;Parent=gene-J4731_08635;Note=frameshifted%3B internal stop;gbkey=CDS;gene=nadB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008910490.1;locus_tag=J4731_08635;product=L-aspartate oxidase;pseudo=true;transl_table=11
JAGETS010000016.1	Genbank	pseudogene	151718	152292	.	+	.	ID=gene-J4731_08640;Name=rpoE;gbkey=Gene;gene=rpoE;gene_biotype=pseudogene;locus_tag=J4731_08640;pseudo=true
JAGETS010000016.1	Protein Homology	CDS	151718	152292	.	+	0	ID=cds-J4731_08640;Parent=gene-J4731_08640;Note=frameshifted;gbkey=CDS;gene=rpoE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006661282.1;locus_tag=J4731_08640;product=RNA polymerase sigma factor RpoE;pseudo=true;transl_table=11
JAGETS010000016.1	Genbank	pseudogene	152351	153019	.	+	.	ID=gene-J4731_08645;Name=J4731_08645;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_08645;pseudo=true
JAGETS010000016.1	Protein Homology	CDS	152351	153019	.	+	0	ID=cds-J4731_08645;Parent=gene-J4731_08645;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006658679.1;locus_tag=J4731_08645;product=anti-sigma-E factor RseA;pseudo=true;transl_table=11
JAGETS010000016.1	Genbank	pseudogene	152967	153905	.	+	.	ID=gene-J4731_08650;Name=rseB;gbkey=Gene;gene=rseB;gene_biotype=pseudogene;locus_tag=J4731_08650;pseudo=true
JAGETS010000016.1	Protein Homology	CDS	152967	153905	.	+	0	ID=cds-J4731_08650;Parent=gene-J4731_08650;Note=frameshifted;gbkey=CDS;gene=rseB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004264982.1;locus_tag=J4731_08650;product=sigma-E factor regulatory protein RseB;pseudo=true;transl_table=11
JAGETS010000016.1	Genbank	pseudogene	153909	154371	.	+	.	ID=gene-J4731_08655;Name=rseC;gbkey=Gene;gene=rseC;gene_biotype=pseudogene;locus_tag=J4731_08655;pseudo=true
JAGETS010000016.1	Protein Homology	CDS	153909	154371	.	+	0	ID=cds-J4731_08655;Parent=gene-J4731_08655;Note=frameshifted;gbkey=CDS;gene=rseC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006661283.1;locus_tag=J4731_08655;product=SoxR-reducing system protein RseC;pseudo=true;transl_table=11
JAGETS010000016.1	Genbank	pseudogene	154793	156559	.	+	.	ID=gene-J4731_08660;Name=lepA;gbkey=Gene;gene=lepA;gene_biotype=pseudogene;locus_tag=J4731_08660;pseudo=true
JAGETS010000016.1	Protein Homology	CDS	154793	156559	.	+	0	ID=cds-J4731_08660;Parent=gene-J4731_08660;Note=frameshifted;gbkey=CDS;gene=lepA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228266.1;locus_tag=J4731_08660;product=elongation factor 4;pseudo=true;transl_table=11
JAGETS010000016.1	Genbank	pseudogene	156577	157540	.	+	.	ID=gene-J4731_08665;Name=lepB;gbkey=Gene;gene=lepB;gene_biotype=pseudogene;locus_tag=J4731_08665;pseudo=true
JAGETS010000016.1	Protein Homology	CDS	156577	157540	.	+	0	ID=cds-J4731_08665;Parent=gene-J4731_08665;Note=frameshifted;gbkey=CDS;gene=lepB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005159411.1;locus_tag=J4731_08665;product=signal peptidase I;pseudo=true;transl_table=11
JAGETS010000016.1	Genbank	pseudogene	157833	158512	.	+	.	ID=gene-J4731_08670;Name=rnc;gbkey=Gene;gene=rnc;gene_biotype=pseudogene;locus_tag=J4731_08670;pseudo=true
JAGETS010000016.1	Protein Homology	CDS	157833	158512	.	+	0	ID=cds-J4731_08670;Parent=gene-J4731_08670;Note=frameshifted;gbkey=CDS;gene=rnc;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006658674.1;locus_tag=J4731_08670;product=ribonuclease III;pseudo=true;transl_table=11
JAGETS010000016.1	Genbank	pseudogene	158505	159407	.	+	.	ID=gene-J4731_08675;Name=era;gbkey=Gene;gene=era;gene_biotype=pseudogene;locus_tag=J4731_08675;pseudo=true
JAGETS010000016.1	Protein Homology	CDS	158505	159407	.	+	0	ID=cds-J4731_08675;Parent=gene-J4731_08675;Note=frameshifted;gbkey=CDS;gene=era;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002214829.1;locus_tag=J4731_08675;product=GTPase Era;pseudo=true;transl_table=11
JAGETS010000016.1	Genbank	pseudogene	159419	160136	.	+	.	ID=gene-J4731_08680;Name=recO;gbkey=Gene;gene=recO;gene_biotype=pseudogene;locus_tag=J4731_08680;pseudo=true
JAGETS010000016.1	Protein Homology	CDS	159419	160136	.	+	0	ID=cds-J4731_08680;Parent=gene-J4731_08680;Note=frameshifted;gbkey=CDS;gene=recO;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004921473.1;locus_tag=J4731_08680;product=DNA repair protein RecO;pseudo=true;transl_table=11
JAGETS010000016.1	Genbank	pseudogene	160421	161180	.	+	.	ID=gene-J4731_08685;Name=pdxJ;gbkey=Gene;gene=pdxJ;gene_biotype=pseudogene;locus_tag=J4731_08685;pseudo=true
JAGETS010000016.1	Protein Homology	CDS	160421	161180	.	+	0	ID=cds-J4731_08685;Parent=gene-J4731_08685;Note=frameshifted;gbkey=CDS;gene=pdxJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008910500.1;locus_tag=J4731_08685;product=pyridoxine 5'-phosphate synthase;pseudo=true;transl_table=11
JAGETS010000016.1	Genbank	pseudogene	161146	161527	.	+	.	ID=gene-J4731_08690;Name=J4731_08690;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_08690;pseudo=true
JAGETS010000016.1	Protein Homology	CDS	161146	161527	.	+	0	ID=cds-J4731_08690;Parent=gene-J4731_08690;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004264973.1;locus_tag=J4731_08690;product=holo-ACP synthase;pseudo=true;transl_table=11
JAGETS010000016.1	Genbank	pseudogene	161615	161873	.	-	.	ID=gene-J4731_08695;Name=J4731_08695;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_08695;pseudo=true
JAGETS010000016.1	Protein Homology	CDS	161615	161873	.	-	0	ID=cds-J4731_08695;Parent=gene-J4731_08695;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708414.1;locus_tag=J4731_08695;product=YfhL family 4Fe-4S dicluster ferredoxin;pseudo=true;transl_table=11
JAGETS010000016.1	Genbank	pseudogene	163079	163636	.	+	.	ID=gene-J4731_08700;Name=J4731_08700;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_08700;pseudo=true
JAGETS010000016.1	Protein Homology	CDS	163079	163636	.	+	0	ID=cds-J4731_08700;Parent=gene-J4731_08700;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012367975.1;locus_tag=J4731_08700;product=LysE family transporter;pseudo=true;transl_table=11
JAGETS010000016.1	Genbank	pseudogene	163897	164089	.	+	.	ID=gene-J4731_08705;Name=J4731_08705;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_08705;pseudo=true
JAGETS010000016.1	Protein Homology	CDS	163897	164089	.	+	0	ID=cds-J4731_08705;Parent=gene-J4731_08705;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004159176.1;locus_tag=J4731_08705;product=hypothetical protein;pseudo=true;transl_table=11
JAGETS010000016.1	Genbank	pseudogene	164467	165878	.	-	.	ID=gene-J4731_08710;Name=mltF;gbkey=Gene;gene=mltF;gene_biotype=pseudogene;locus_tag=J4731_08710;pseudo=true
JAGETS010000016.1	Protein Homology	CDS	164467	165878	.	-	0	ID=cds-J4731_08710;Parent=gene-J4731_08710;Note=frameshifted;gbkey=CDS;gene=mltF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014656331.1;locus_tag=J4731_08710;product=membrane-bound lytic murein transglycosylase MltF;pseudo=true;transl_table=11
JAGETS010000016.1	Genbank	pseudogene	166147	170036	.	+	.	ID=gene-J4731_08715;Name=purL;gbkey=Gene;gene=purL;gene_biotype=pseudogene;gene_synonym=purI;locus_tag=J4731_08715;pseudo=true
JAGETS010000016.1	Protein Homology	CDS	166147	170036	.	+	0	ID=cds-J4731_08715;Parent=gene-J4731_08715;Note=frameshifted;gbkey=CDS;gene=purL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004248447.1;locus_tag=J4731_08715;product=phosphoribosylformylglycinamidine synthase;pseudo=true;transl_table=11
JAGETS010000016.1	Genbank	pseudogene	170133	170774	.	-	.	ID=gene-J4731_08720;Name=J4731_08720;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_08720;pseudo=true
JAGETS010000016.1	Protein Homology	CDS	170133	170774	.	-	0	ID=cds-J4731_08720;Parent=gene-J4731_08720;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004264965.1;locus_tag=J4731_08720;product=3-keto-L-gulonate-6-phosphate decarboxylase UlaD;pseudo=true;transl_table=11
JAGETS010000016.1	Genbank	pseudogene	170771	171597	.	-	.	ID=gene-J4731_08725;Name=J4731_08725;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_08725;pseudo=true
JAGETS010000016.1	Protein Homology	CDS	170771	171597	.	-	0	ID=cds-J4731_08725;Parent=gene-J4731_08725;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004264964.1;locus_tag=J4731_08725;product=Cof-type HAD-IIB family hydrolase;pseudo=true;transl_table=11
JAGETS010000016.1	Genbank	gene	171616	172113	.	-	.	ID=gene-J4731_08730;Name=J4731_08730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_08730
JAGETS010000016.1	Protein Homology	CDS	171616	172113	.	-	0	ID=cds-MBO1929078.1;Parent=gene-J4731_08730;Dbxref=NCBI_GP:MBO1929078.1;Name=MBO1929078.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006663262.1;locus_tag=J4731_08730;product=PTS sugar transporter subunit IIA;protein_id=MBO1929078.1;transl_table=11
JAGETS010000016.1	Genbank	pseudogene	172185	173882	.	-	.	ID=gene-J4731_08735;Name=J4731_08735;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_08735;pseudo=true
JAGETS010000016.1	Protein Homology	CDS	172185	173882	.	-	0	ID=cds-J4731_08735;Parent=gene-J4731_08735;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005186928.1;locus_tag=J4731_08735;product=PTS ascorbate-specific subunit IIBC;pseudo=true;transl_table=11
JAGETS010000016.1	Genbank	pseudogene	174321	175059	.	+	.	ID=gene-J4731_08740;Name=ulaR;gbkey=Gene;gene=ulaR;gene_biotype=pseudogene;locus_tag=J4731_08740;pseudo=true
JAGETS010000016.1	Protein Homology	CDS	174321	175059	.	+	0	ID=cds-J4731_08740;Parent=gene-J4731_08740;Note=frameshifted;gbkey=CDS;gene=ulaR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012768065.1;locus_tag=J4731_08740;product=HTH-type transcriptional regulator UlaR;pseudo=true;transl_table=11
JAGETS010000016.1	Genbank	pseudogene	175183	176239	.	+	.	ID=gene-J4731_08745;Name=ulaG;gbkey=Gene;gene=ulaG;gene_biotype=pseudogene;locus_tag=J4731_08745;pseudo=true
JAGETS010000016.1	Protein Homology	CDS	175183	176239	.	+	0	ID=cds-J4731_08745;Parent=gene-J4731_08745;Note=frameshifted;gbkey=CDS;gene=ulaG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017686547.1;locus_tag=J4731_08745;product=L-ascorbate 6-phosphate lactonase;pseudo=true;transl_table=11
JAGETS010000016.1	Genbank	gene	176470	176574	.	+	.	ID=gene-J4731_08750;Name=J4731_08750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_08750
JAGETS010000016.1	Protein Homology	CDS	176470	176574	.	+	0	ID=cds-MBO1929079.1;Parent=gene-J4731_08750;Dbxref=NCBI_GP:MBO1929079.1;Name=MBO1929079.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_071548218.1;locus_tag=J4731_08750;product=pantocin A family RiPP;protein_id=MBO1929079.1;transl_table=11
JAGETS010000016.1	Genbank	pseudogene	176623	177740	.	+	.	ID=gene-J4731_08755;Name=J4731_08755;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_08755;pseudo=true
JAGETS010000016.1	Protein Homology	CDS	176623	177740	.	+	0	ID=cds-J4731_08755;Parent=gene-J4731_08755;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008912905.1;locus_tag=J4731_08755;product=ThiF family adenylyltransferase;pseudo=true;transl_table=11
JAGETS010000016.1	Genbank	pseudogene	178371	179231	.	+	.	ID=gene-J4731_08760;Name=J4731_08760;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_08760;pseudo=true
JAGETS010000016.1	Protein Homology	CDS	178371	179231	.	+	0	ID=cds-J4731_08760;Parent=gene-J4731_08760;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004264955.1;locus_tag=J4731_08760;product=DMT family transporter;pseudo=true;transl_table=11
JAGETS010000016.1	Genbank	pseudogene	179387	180414	.	-	.	ID=gene-J4731_08765;Name=fbpC;gbkey=Gene;gene=fbpC;gene_biotype=pseudogene;locus_tag=J4731_08765;pseudo=true
JAGETS010000016.1	Protein Homology	CDS	179387	180414	.	-	0	ID=cds-J4731_08765;Parent=gene-J4731_08765;Note=frameshifted;gbkey=CDS;gene=fbpC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414796.2;locus_tag=J4731_08765;product=ferric ABC transporter ATP-binding protein;pseudo=true;transl_table=11
JAGETS010000016.1	Genbank	pseudogene	180431	182500	.	-	.	ID=gene-J4731_08770;Name=J4731_08770;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_08770;pseudo=true
JAGETS010000016.1	Protein Homology	CDS	180431	182500	.	-	0	ID=cds-J4731_08770;Parent=gene-J4731_08770;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008910556.1;locus_tag=J4731_08770;product=iron ABC transporter permease;pseudo=true;transl_table=11
JAGETS010000016.1	Genbank	pseudogene	182651	183676	.	-	.	ID=gene-J4731_08775;Name=J4731_08775;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_08775;pseudo=true
JAGETS010000016.1	Protein Homology	CDS	182651	183676	.	-	0	ID=cds-J4731_08775;Parent=gene-J4731_08775;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308442.1;locus_tag=J4731_08775;product=ABC transporter substrate-binding protein;pseudo=true;transl_table=11
JAGETS010000016.1	Genbank	pseudogene	183691	184999	.	-	.	ID=gene-J4731_08780;Name=J4731_08780;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_08780;pseudo=true
JAGETS010000016.1	Protein Homology	CDS	183691	184999	.	-	0	ID=cds-J4731_08780;Parent=gene-J4731_08780;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006661294.1;locus_tag=J4731_08780;product=MFS transporter;pseudo=true;transl_table=11
JAGETS010000016.1	Genbank	pseudogene	185106	186595	.	-	.	ID=gene-J4731_08785;Name=J4731_08785;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_08785;pseudo=true
JAGETS010000016.1	Protein Homology	CDS	185106	186595	.	-	0	ID=cds-J4731_08785;Parent=gene-J4731_08785;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005970887.1;locus_tag=J4731_08785;product=MASE1 domain-containing protein;pseudo=true;transl_table=11
JAGETS010000016.1	Genbank	pseudogene	186632	187251	.	-	.	ID=gene-J4731_08790;Name=J4731_08790;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_08790;pseudo=true
JAGETS010000016.1	Protein Homology	CDS	186632	187251	.	-	0	ID=cds-J4731_08790;Parent=gene-J4731_08790;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006814715.1;locus_tag=J4731_08790;product=response regulator transcription factor;pseudo=true;transl_table=11
JAGETS010000016.1	Genbank	pseudogene	187408	188431	.	-	.	ID=gene-J4731_08795;Name=J4731_08795;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_08795;pseudo=true
JAGETS010000016.1	Protein Homology	CDS	187408	188431	.	-	0	ID=cds-J4731_08795;Parent=gene-J4731_08795;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004264946.1;locus_tag=J4731_08795;product=methyltransferase;pseudo=true;transl_table=11
JAGETS010000016.1	Genbank	pseudogene	189658	191082	.	+	.	ID=gene-J4731_08800;Name=J4731_08800;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_08800;pseudo=true
JAGETS010000016.1	Protein Homology	CDS	189658	191082	.	+	0	ID=cds-J4731_08800;Parent=gene-J4731_08800;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192820.1;locus_tag=J4731_08800;product=HAMP domain-containing histidine kinase;pseudo=true;transl_table=11
JAGETS010000016.1	Genbank	pseudogene	191220	191902	.	+	.	ID=gene-J4731_08805;Name=qseG;gbkey=Gene;gene=qseG;gene_biotype=pseudogene;locus_tag=J4731_08805;pseudo=true
JAGETS010000016.1	Protein Homology	CDS	191220	191902	.	+	0	ID=cds-J4731_08805;Parent=gene-J4731_08805;Note=frameshifted;gbkey=CDS;gene=qseG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006814711.1;locus_tag=J4731_08805;product=two-component system QseEF-associated lipoprotein QseG;pseudo=true;transl_table=11
JAGETS010000016.1	Genbank	pseudogene	191899	193223	.	+	.	ID=gene-J4731_08810;Name=glrR;gbkey=Gene;gene=glrR;gene_biotype=pseudogene;locus_tag=J4731_08810;pseudo=true
JAGETS010000016.1	Protein Homology	CDS	191899	193223	.	+	0	ID=cds-J4731_08810;Parent=gene-J4731_08810;Note=frameshifted;gbkey=CDS;gene=glrR;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228250.1;locus_tag=J4731_08810;product=two-component system response regulator GlrR;pseudo=true;transl_table=11
JAGETS010000016.1	Genbank	pseudogene	193311	194911	.	+	.	ID=gene-J4731_08815;Name=J4731_08815;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_08815;pseudo=true
JAGETS010000016.1	Protein Homology	CDS	193311	194911	.	+	0	ID=cds-J4731_08815;Parent=gene-J4731_08815;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211555.1;locus_tag=J4731_08815;product=NAD+ synthase;pseudo=true;transl_table=11
JAGETS010000016.1	Genbank	pseudogene	194888	195270	.	+	.	ID=gene-J4731_08820;Name=glnB;gbkey=Gene;gene=glnB;gene_biotype=pseudogene;locus_tag=J4731_08820;pseudo=true
JAGETS010000016.1	Protein Homology	CDS	194888	195270	.	+	0	ID=cds-J4731_08820;Parent=gene-J4731_08820;Note=frameshifted%3B internal stop;gbkey=CDS;gene=glnB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017373484.1;locus_tag=J4731_08820;product=nitrogen regulatory protein P-II;pseudo=true;transl_table=11
JAGETS010000016.1	Genbank	gene	195464	195619	.	-	.	ID=gene-J4731_08825;Name=J4731_08825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_08825
JAGETS010000016.1	GeneMarkS-2+	CDS	195464	195619	.	-	0	ID=cds-MBO1929080.1;Parent=gene-J4731_08825;Dbxref=NCBI_GP:MBO1929080.1;Name=MBO1929080.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_08825;product=hypothetical protein;protein_id=MBO1929080.1;transl_table=11
##sequence-region JAGETS010000017.1 1 186939
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=587
JAGETS010000017.1	Genbank	region	1	186939	.	+	.	ID=JAGETS010000017.1:1..186939;Dbxref=taxon:587;collected-by=NHLS;collection-date=2018;country=South Africa: Pretoria;gbkey=Src;isolation-source=stool;lat-lon=25.7479 S 28.2293 E;mol_type=genomic DNA;nat-host=porcine;strain=SG003
JAGETS010000017.1	Genbank	pseudogene	46	725	.	-	.	ID=gene-J4731_08830;Name=J4731_08830;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_08830;pseudo=true
JAGETS010000017.1	Protein Homology	CDS	46	725	.	-	0	ID=cds-J4731_08830;Parent=gene-J4731_08830;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013576461.1;locus_tag=J4731_08830;product=response regulator;pseudo=true;transl_table=11
JAGETS010000017.1	Genbank	pseudogene	771	3363	.	-	.	ID=gene-J4731_08835;Name=kdpD;gbkey=Gene;gene=kdpD;gene_biotype=pseudogene;locus_tag=J4731_08835;pseudo=true
JAGETS010000017.1	Protein Homology	CDS	771	3363	.	-	0	ID=cds-J4731_08835;Parent=gene-J4731_08835;Note=frameshifted%3B internal stop;gbkey=CDS;gene=kdpD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004939924.1;locus_tag=J4731_08835;product=two-component system sensor histidine kinase KdpD;pseudo=true;transl_table=11
JAGETS010000017.1	Genbank	pseudogene	3369	3949	.	-	.	ID=gene-J4731_08840;Name=kdpC;gbkey=Gene;gene=kdpC;gene_biotype=pseudogene;locus_tag=J4731_08840;pseudo=true
JAGETS010000017.1	Protein Homology	CDS	3369	3949	.	-	0	ID=cds-J4731_08840;Parent=gene-J4731_08840;Note=frameshifted;gbkey=CDS;gene=kdpC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014657757.1;locus_tag=J4731_08840;product=potassium-transporting ATPase subunit KdpC;pseudo=true;transl_table=11
JAGETS010000017.1	Genbank	gene	3960	4127	.	-	.	ID=gene-J4731_08845;Name=J4731_08845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_08845
JAGETS010000017.1	GeneMarkS-2+	CDS	3960	4127	.	-	0	ID=cds-MBO1929081.1;Parent=gene-J4731_08845;Dbxref=NCBI_GP:MBO1929081.1;Name=MBO1929081.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_08845;product=hypothetical protein;protein_id=MBO1929081.1;transl_table=11
JAGETS010000017.1	Genbank	gene	4124	4360	.	-	.	ID=gene-J4731_08850;Name=J4731_08850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_08850
JAGETS010000017.1	GeneMarkS-2+	CDS	4124	4360	.	-	0	ID=cds-MBO1929082.1;Parent=gene-J4731_08850;Dbxref=NCBI_GP:MBO1929082.1;Name=MBO1929082.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_08850;product=hypothetical protein;protein_id=MBO1929082.1;transl_table=11
JAGETS010000017.1	Genbank	gene	4348	4500	.	-	.	ID=gene-J4731_08855;Name=J4731_08855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_08855
JAGETS010000017.1	Protein Homology	CDS	4348	4500	.	-	0	ID=cds-MBO1929083.1;Parent=gene-J4731_08855;Dbxref=NCBI_GP:MBO1929083.1;Name=MBO1929083.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003093042.1;locus_tag=J4731_08855;product=HAD hydrolase family protein;protein_id=MBO1929083.1;transl_table=11
JAGETS010000017.1	Genbank	pseudogene	4491	5962	.	-	.	ID=gene-J4731_08860;Name=kdpB;gbkey=Gene;gene=kdpB;gene_biotype=pseudogene;locus_tag=J4731_08860;pseudo=true
JAGETS010000017.1	Protein Homology	CDS	4491	5962	.	-	0	ID=cds-J4731_08860;Parent=gene-J4731_08860;Note=frameshifted%3B internal stop;gbkey=CDS;gene=kdpB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001431196.1;locus_tag=J4731_08860;product=potassium-transporting ATPase subunit KdpB;pseudo=true;transl_table=11
JAGETS010000017.1	Genbank	pseudogene	6144	7582	.	-	.	ID=gene-J4731_08865;Name=kdpA;gbkey=Gene;gene=kdpA;gene_biotype=pseudogene;locus_tag=J4731_08865;pseudo=true
JAGETS010000017.1	Protein Homology	CDS	6144	7582	.	-	0	ID=cds-J4731_08865;Parent=gene-J4731_08865;Note=frameshifted%3B internal stop;gbkey=CDS;gene=kdpA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011145726.1;locus_tag=J4731_08865;product=potassium-transporting ATPase subunit A;pseudo=true;transl_table=11
JAGETS010000017.1	Genbank	gene	7622	7711	.	-	.	ID=gene-J4731_08870;Name=kdpF;gbkey=Gene;gene=kdpF;gene_biotype=protein_coding;locus_tag=J4731_08870
JAGETS010000017.1	Protein Homology	CDS	7622	7711	.	-	0	ID=cds-MBO1929084.1;Parent=gene-J4731_08870;Dbxref=NCBI_GP:MBO1929084.1;Name=MBO1929084.1;gbkey=CDS;gene=kdpF;inference=COORDINATES: protein motif:HMM:TIGR02115.1;locus_tag=J4731_08870;product=K(+)-transporting ATPase subunit F;protein_id=MBO1929084.1;transl_table=11
JAGETS010000017.1	Genbank	pseudogene	8157	8361	.	+	.	ID=gene-J4731_08875;Name=J4731_08875;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_08875;pseudo=true
JAGETS010000017.1	Protein Homology	CDS	8157	8361	.	+	0	ID=cds-J4731_08875;Parent=gene-J4731_08875;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006812783.1;locus_tag=J4731_08875;product=YbfA family protein;pseudo=true;transl_table=11
JAGETS010000017.1	Genbank	pseudogene	8592	9330	.	+	.	ID=gene-J4731_08880;Name=J4731_08880;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_08880;pseudo=true
JAGETS010000017.1	Protein Homology	CDS	8592	9330	.	+	0	ID=cds-J4731_08880;Parent=gene-J4731_08880;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000798871.1;locus_tag=J4731_08880;product=type 2 GTP cyclohydrolase I;pseudo=true;transl_table=11
JAGETS010000017.1	Genbank	pseudogene	10180	10446	.	+	.	ID=gene-J4731_08885;Name=hcp;gbkey=Gene;gene=hcp;gene_biotype=pseudogene;locus_tag=J4731_08885;pseudo=true
JAGETS010000017.1	Protein Homology	CDS	10180	10446	.	+	0	ID=cds-J4731_08885;Parent=gene-J4731_08885;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;gene=hcp;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308261.1;locus_tag=J4731_08885;product=type VI secretion system tube protein Hcp;pseudo=true;transl_table=11
JAGETS010000017.1	Genbank	pseudogene	10442	11060	.	+	.	ID=gene-J4731_08890;Name=J4731_08890;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_08890;pseudo=true
JAGETS010000017.1	Protein Homology	CDS	10442	11060	.	+	0	ID=cds-J4731_08890;Parent=gene-J4731_08890;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000346907.1;locus_tag=J4731_08890;product=Vgr-like protein;pseudo=true;transl_table=11
JAGETS010000017.1	Genbank	gene	11053	11316	.	+	.	ID=gene-J4731_08895;Name=J4731_08895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_08895
JAGETS010000017.1	Protein Homology	CDS	11053	11316	.	+	0	ID=cds-MBO1929085.1;Parent=gene-J4731_08895;Dbxref=NCBI_GP:MBO1929085.1;Name=MBO1929085.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024894.1;locus_tag=J4731_08895;product=DUF4123 domain-containing protein;protein_id=MBO1929085.1;transl_table=11
JAGETS010000017.1	Genbank	gene	11986	12153	.	+	.	ID=gene-J4731_08900;Name=J4731_08900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_08900
JAGETS010000017.1	GeneMarkS-2+	CDS	11986	12153	.	+	0	ID=cds-MBO1929086.1;Parent=gene-J4731_08900;Dbxref=NCBI_GP:MBO1929086.1;Name=MBO1929086.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_08900;product=hypothetical protein;protein_id=MBO1929086.1;transl_table=11
JAGETS010000017.1	Genbank	gene	12186	12437	.	+	.	ID=gene-J4731_08905;Name=J4731_08905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_08905
JAGETS010000017.1	GeneMarkS-2+	CDS	12186	12437	.	+	0	ID=cds-MBO1929087.1;Parent=gene-J4731_08905;Dbxref=NCBI_GP:MBO1929087.1;Name=MBO1929087.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_08905;product=hypothetical protein;protein_id=MBO1929087.1;transl_table=11
JAGETS010000017.1	Genbank	gene	12434	12757	.	+	.	ID=gene-J4731_08910;Name=J4731_08910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_08910
JAGETS010000017.1	GeneMarkS-2+	CDS	12434	12757	.	+	0	ID=cds-MBO1929088.1;Parent=gene-J4731_08910;Dbxref=NCBI_GP:MBO1929088.1;Name=MBO1929088.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_08910;product=hypothetical protein;protein_id=MBO1929088.1;transl_table=11
JAGETS010000017.1	Genbank	gene	12759	12986	.	+	.	ID=gene-J4731_08915;Name=J4731_08915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_08915
JAGETS010000017.1	GeneMarkS-2+	CDS	12759	12986	.	+	0	ID=cds-MBO1929089.1;Parent=gene-J4731_08915;Dbxref=NCBI_GP:MBO1929089.1;Name=MBO1929089.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_08915;product=hypothetical protein;protein_id=MBO1929089.1;transl_table=11
JAGETS010000017.1	Genbank	pseudogene	14613	14878	.	+	.	ID=gene-J4731_08920;Name=J4731_08920;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_08920;pseudo=true
JAGETS010000017.1	Protein Homology	CDS	14613	14878	.	+	0	ID=cds-J4731_08920;Parent=gene-J4731_08920;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015731055.1;locus_tag=J4731_08920;product=PAAR domain-containing protein;pseudo=true;transl_table=11
JAGETS010000017.1	Genbank	pseudogene	14996	15588	.	+	.	ID=gene-J4731_08925;Name=J4731_08925;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_08925;pseudo=true
JAGETS010000017.1	Protein Homology	CDS	14996	15588	.	+	0	ID=cds-J4731_08925;Parent=gene-J4731_08925;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004249259.1;locus_tag=J4731_08925;product=LemA family protein;pseudo=true;transl_table=11
JAGETS010000017.1	Genbank	pseudogene	15585	16743	.	+	.	ID=gene-J4731_08930;Name=J4731_08930;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_08930;pseudo=true
JAGETS010000017.1	Protein Homology	CDS	15585	16743	.	+	0	ID=cds-J4731_08930;Parent=gene-J4731_08930;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004245782.1;locus_tag=J4731_08930;product=TPM domain-containing protein;pseudo=true;transl_table=11
JAGETS010000017.1	Genbank	pseudogene	16926	17130	.	+	.	ID=gene-J4731_08935;Name=J4731_08935;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_08935;pseudo=true
JAGETS010000017.1	Protein Homology	CDS	16926	17130	.	+	0	ID=cds-J4731_08935;Parent=gene-J4731_08935;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004259736.1;locus_tag=J4731_08935;product=hypothetical protein;pseudo=true;transl_table=11
JAGETS010000017.1	Genbank	pseudogene	17394	18472	.	-	.	ID=gene-J4731_08940;Name=J4731_08940;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_08940;pseudo=true
JAGETS010000017.1	Protein Homology	CDS	17394	18472	.	-	0	ID=cds-J4731_08940;Parent=gene-J4731_08940;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006660458.1;locus_tag=J4731_08940;product=MFS transporter;pseudo=true;transl_table=11
JAGETS010000017.1	Genbank	pseudogene	18646	19398	.	+	.	ID=gene-J4731_08945;Name=J4731_08945;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_08945;pseudo=true
JAGETS010000017.1	Protein Homology	CDS	18646	19398	.	+	0	ID=cds-J4731_08945;Parent=gene-J4731_08945;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004256845.1;locus_tag=J4731_08945;product=helix-turn-helix transcriptional regulator;pseudo=true;transl_table=11
JAGETS010000017.1	Genbank	pseudogene	19477	20762	.	-	.	ID=gene-J4731_08950;Name=gltA;gbkey=Gene;gene=gltA;gene_biotype=pseudogene;locus_tag=J4731_08950;pseudo=true
JAGETS010000017.1	Protein Homology	CDS	19477	20762	.	-	0	ID=cds-J4731_08950;Parent=gene-J4731_08950;Note=frameshifted;gbkey=CDS;gene=gltA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010299182.1;locus_tag=J4731_08950;product=citrate (Si)-synthase;pseudo=true;transl_table=11
JAGETS010000017.1	Genbank	pseudogene	21426	21803	.	+	.	ID=gene-J4731_08955;Name=sdhC;gbkey=Gene;gene=sdhC;gene_biotype=pseudogene;gene_synonym=cybA,dhsC;locus_tag=J4731_08955;pseudo=true
JAGETS010000017.1	Protein Homology	CDS	21426	21803	.	+	0	ID=cds-J4731_08955;Parent=gene-J4731_08955;Note=internal stop;gbkey=CDS;gene=sdhC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210722.1;locus_tag=J4731_08955;product=succinate dehydrogenase cytochrome b556 subunit;pseudo=true;transl_table=11
JAGETS010000017.1	Genbank	pseudogene	21805	22147	.	+	.	ID=gene-J4731_08960;Name=sdhD;gbkey=Gene;gene=sdhD;gene_biotype=pseudogene;gene_synonym=cybS,dhsD;locus_tag=J4731_08960;pseudo=true
JAGETS010000017.1	Protein Homology	CDS	21805	22147	.	+	0	ID=cds-J4731_08960;Parent=gene-J4731_08960;Note=frameshifted;gbkey=CDS;gene=sdhD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019082678.1;locus_tag=J4731_08960;product=succinate dehydrogenase membrane anchor subunit;pseudo=true;transl_table=11
JAGETS010000017.1	Genbank	pseudogene	22148	23907	.	+	.	ID=gene-J4731_08965;Name=sdhA;gbkey=Gene;gene=sdhA;gene_biotype=pseudogene;locus_tag=J4731_08965;pseudo=true
JAGETS010000017.1	Protein Homology	CDS	22148	23907	.	+	0	ID=cds-J4731_08965;Parent=gene-J4731_08965;Note=frameshifted;gbkey=CDS;gene=sdhA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122549.1;locus_tag=J4731_08965;product=succinate dehydrogenase flavoprotein subunit;pseudo=true;transl_table=11
JAGETS010000017.1	Genbank	pseudogene	23943	24655	.	+	.	ID=gene-J4731_08970;Name=J4731_08970;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_08970;pseudo=true
JAGETS010000017.1	Protein Homology	CDS	23943	24655	.	+	0	ID=cds-J4731_08970;Parent=gene-J4731_08970;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133276.1;locus_tag=J4731_08970;product=succinate dehydrogenase iron-sulfur subunit;pseudo=true;transl_table=11
JAGETS010000017.1	Genbank	gene	24768	24962	.	+	.	ID=gene-J4731_08975;Name=J4731_08975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_08975
JAGETS010000017.1	GeneMarkS-2+	CDS	24768	24962	.	+	0	ID=cds-MBO1929090.1;Parent=gene-J4731_08975;Dbxref=NCBI_GP:MBO1929090.1;Name=MBO1929090.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_08975;product=hypothetical protein;protein_id=MBO1929090.1;transl_table=11
JAGETS010000017.1	Genbank	pseudogene	25143	27928	.	+	.	ID=gene-J4731_08980;Name=sucA;gbkey=Gene;gene=sucA;gene_biotype=pseudogene;locus_tag=J4731_08980;pseudo=true
JAGETS010000017.1	Protein Homology	CDS	25143	27928	.	+	0	ID=cds-J4731_08980;Parent=gene-J4731_08980;Note=frameshifted%3B internal stop;gbkey=CDS;gene=sucA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308778.1;locus_tag=J4731_08980;product=2-oxoglutarate dehydrogenase E1 component;pseudo=true;transl_table=11
JAGETS010000017.1	Genbank	pseudogene	27943	29151	.	+	.	ID=gene-J4731_08985;Name=odhB;gbkey=Gene;gene=odhB;gene_biotype=pseudogene;locus_tag=J4731_08985;pseudo=true
JAGETS010000017.1	Protein Homology	CDS	27943	29151	.	+	0	ID=cds-J4731_08985;Parent=gene-J4731_08985;Note=frameshifted;gbkey=CDS;gene=odhB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225870.1;locus_tag=J4731_08985;product=2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase;pseudo=true;transl_table=11
JAGETS010000017.1	Genbank	pseudogene	29277	30413	.	+	.	ID=gene-J4731_08990;Name=sucC;gbkey=Gene;gene=sucC;gene_biotype=pseudogene;locus_tag=J4731_08990;pseudo=true
JAGETS010000017.1	Protein Homology	CDS	29277	30413	.	+	0	ID=cds-J4731_08990;Parent=gene-J4731_08990;Note=frameshifted%3B internal stop;gbkey=CDS;gene=sucC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133271.1;locus_tag=J4731_08990;product=ADP-forming succinate--CoA ligase subunit beta;pseudo=true;transl_table=11
JAGETS010000017.1	Genbank	pseudogene	30413	31284	.	+	.	ID=gene-J4731_08995;Name=sucD;gbkey=Gene;gene=sucD;gene_biotype=pseudogene;locus_tag=J4731_08995;pseudo=true
JAGETS010000017.1	Protein Homology	CDS	30413	31284	.	+	0	ID=cds-J4731_08995;Parent=gene-J4731_08995;Note=frameshifted;gbkey=CDS;gene=sucD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006660448.1;locus_tag=J4731_08995;product=succinate--CoA ligase subunit alpha;pseudo=true;transl_table=11
JAGETS010000017.1	Genbank	pseudogene	32116	33677	.	+	.	ID=gene-J4731_09000;Name=cydA;gbkey=Gene;gene=cydA;gene_biotype=pseudogene;locus_tag=J4731_09000;pseudo=true
JAGETS010000017.1	Protein Homology	CDS	32116	33677	.	+	0	ID=cds-J4731_09000;Parent=gene-J4731_09000;Note=frameshifted%3B internal stop;gbkey=CDS;gene=cydA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006812766.1;locus_tag=J4731_09000;product=cytochrome ubiquinol oxidase subunit I;pseudo=true;transl_table=11
JAGETS010000017.1	Genbank	pseudogene	33692	34828	.	+	.	ID=gene-J4731_09005;Name=cydB;gbkey=Gene;gene=cydB;gene_biotype=pseudogene;locus_tag=J4731_09005;pseudo=true
JAGETS010000017.1	Protein Homology	CDS	33692	34828	.	+	0	ID=cds-J4731_09005;Parent=gene-J4731_09005;Note=frameshifted;gbkey=CDS;gene=cydB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004393310.1;locus_tag=J4731_09005;product=cytochrome d ubiquinol oxidase subunit II;pseudo=true;transl_table=11
JAGETS010000017.1	Genbank	gene	34840	34953	.	+	.	ID=gene-J4731_09010;Name=cydX;gbkey=Gene;gene=cydX;gene_biotype=protein_coding;locus_tag=J4731_09010
JAGETS010000017.1	Protein Homology	CDS	34840	34953	.	+	0	ID=cds-MBO1929091.1;Parent=gene-J4731_09010;Dbxref=NCBI_GP:MBO1929091.1;Name=MBO1929091.1;gbkey=CDS;gene=cydX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006324114.1;locus_tag=J4731_09010;product=cytochrome bd-I oxidase subunit CydX;protein_id=MBO1929091.1;transl_table=11
JAGETS010000017.1	Genbank	pseudogene	34959	35243	.	+	.	ID=gene-J4731_09015;Name=ybgE;gbkey=Gene;gene=ybgE;gene_biotype=pseudogene;locus_tag=J4731_09015;pseudo=true
JAGETS010000017.1	Protein Homology	CDS	34959	35243	.	+	0	ID=cds-J4731_09015;Parent=gene-J4731_09015;Note=frameshifted;gbkey=CDS;gene=ybgE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004256791.1;locus_tag=J4731_09015;product=cyd operon protein YbgE;pseudo=true;transl_table=11
JAGETS010000017.1	Genbank	pseudogene	35376	35775	.	+	.	ID=gene-J4731_09020;Name=ybgC;gbkey=Gene;gene=ybgC;gene_biotype=pseudogene;locus_tag=J4731_09020;pseudo=true
JAGETS010000017.1	Protein Homology	CDS	35376	35775	.	+	0	ID=cds-J4731_09020;Parent=gene-J4731_09020;Note=frameshifted;gbkey=CDS;gene=ybgC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006660443.1;locus_tag=J4731_09020;product=tol-pal system-associated acyl-CoA thioesterase;pseudo=true;transl_table=11
JAGETS010000017.1	Genbank	pseudogene	35772	36450	.	+	.	ID=gene-J4731_09025;Name=tolQ;gbkey=Gene;gene=tolQ;gene_biotype=pseudogene;locus_tag=J4731_09025;pseudo=true
JAGETS010000017.1	Protein Homology	CDS	35772	36450	.	+	0	ID=cds-J4731_09025;Parent=gene-J4731_09025;Note=frameshifted;gbkey=CDS;gene=tolQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210735.1;locus_tag=J4731_09025;product=Tol-Pal system protein TolQ;pseudo=true;transl_table=11
JAGETS010000017.1	Genbank	pseudogene	36557	36874	.	+	.	ID=gene-J4731_09030;Name=J4731_09030;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_09030;pseudo=true
JAGETS010000017.1	Protein Homology	CDS	36557	36874	.	+	0	ID=cds-J4731_09030;Parent=gene-J4731_09030;Note=membrane spanning protein in TolA-TolQ-TolR complex%3B involved in the tonB-independent uptake of group A colicins%3B frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004244435.1;locus_tag=J4731_09030;product=protein TolR;pseudo=true;transl_table=11
JAGETS010000017.1	Genbank	pseudogene	36969	37996	.	+	.	ID=gene-J4731_09035;Name=tolA;gbkey=Gene;gene=tolA;gene_biotype=pseudogene;locus_tag=J4731_09035;pseudo=true
JAGETS010000017.1	Protein Homology	CDS	36969	37996	.	+	0	ID=cds-J4731_09035;Parent=gene-J4731_09035;Note=frameshifted;gbkey=CDS;gene=tolA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004256784.1;locus_tag=J4731_09035;product=cell envelope integrity protein TolA;pseudo=true;transl_table=11
JAGETS010000017.1	Genbank	pseudogene	38144	39403	.	+	.	ID=gene-J4731_09040;Name=tolB;gbkey=Gene;gene=tolB;gene_biotype=pseudogene;locus_tag=J4731_09040;pseudo=true
JAGETS010000017.1	Protein Homology	CDS	38144	39403	.	+	0	ID=cds-J4731_09040;Parent=gene-J4731_09040;Note=frameshifted%3B internal stop;gbkey=CDS;gene=tolB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001646851.1;locus_tag=J4731_09040;product=Tol-Pal system protein TolB;pseudo=true;transl_table=11
JAGETS010000017.1	Genbank	pseudogene	39468	39878	.	+	.	ID=gene-J4731_09045;Name=J4731_09045;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_09045;pseudo=true
JAGETS010000017.1	Protein Homology	CDS	39468	39878	.	+	0	ID=cds-J4731_09045;Parent=gene-J4731_09045;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011145759.1;locus_tag=J4731_09045;product=OmpA family protein;pseudo=true;transl_table=11
JAGETS010000017.1	Genbank	pseudogene	39943	40769	.	+	.	ID=gene-J4731_09050;Name=ybgF;gbkey=Gene;gene=ybgF;gene_biotype=pseudogene;locus_tag=J4731_09050;pseudo=true
JAGETS010000017.1	Protein Homology	CDS	39943	40769	.	+	0	ID=cds-J4731_09050;Parent=gene-J4731_09050;Note=frameshifted%3B internal stop;gbkey=CDS;gene=ybgF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004917784.1;locus_tag=J4731_09050;product=tol-pal system protein YbgF;pseudo=true;transl_table=11
JAGETS010000017.1	Genbank	gene	40910	40985	.	+	.	ID=gene-J4731_09055;Name=J4731_09055;gbkey=Gene;gene_biotype=tRNA;locus_tag=J4731_09055
JAGETS010000017.1	tRNAscan-SE	tRNA	40910	40985	.	+	.	ID=rna-J4731_09055;Parent=gene-J4731_09055;anticodon=(pos:40943..40945);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=J4731_09055;product=tRNA-Lys
JAGETS010000017.1	tRNAscan-SE	exon	40910	40985	.	+	.	ID=exon-J4731_09055-1;Parent=rna-J4731_09055;anticodon=(pos:40943..40945);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=J4731_09055;product=tRNA-Lys
JAGETS010000017.1	Genbank	gene	41016	41089	.	+	.	ID=gene-J4731_09060;Name=J4731_09060;gbkey=Gene;gene_biotype=tRNA;locus_tag=J4731_09060
JAGETS010000017.1	tRNAscan-SE	tRNA	41016	41089	.	+	.	ID=rna-J4731_09060;Parent=gene-J4731_09060;anticodon=(pos:41049..41051);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=J4731_09060;product=tRNA-Lys
JAGETS010000017.1	tRNAscan-SE	exon	41016	41089	.	+	.	ID=exon-J4731_09060-1;Parent=rna-J4731_09060;anticodon=(pos:41049..41051);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=J4731_09060;product=tRNA-Lys
JAGETS010000017.1	Genbank	pseudogene	41354	42213	.	-	.	ID=gene-J4731_09065;Name=J4731_09065;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_09065;pseudo=true
JAGETS010000017.1	Protein Homology	CDS	41354	42213	.	-	0	ID=cds-J4731_09065;Parent=gene-J4731_09065;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004256774.1;locus_tag=J4731_09065;product=aminoglycoside 6-adenylyltransferase;pseudo=true;transl_table=11
JAGETS010000017.1	Genbank	gene	43152	43466	.	+	.	ID=gene-J4731_09070;Name=J4731_09070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_09070
JAGETS010000017.1	GeneMarkS-2+	CDS	43152	43466	.	+	0	ID=cds-MBO1929092.1;Parent=gene-J4731_09070;Dbxref=NCBI_GP:MBO1929092.1;Name=MBO1929092.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_09070;product=hypothetical protein;protein_id=MBO1929092.1;transl_table=11
JAGETS010000017.1	Genbank	pseudogene	43964	44990	.	+	.	ID=gene-J4731_09075;Name=nadA;gbkey=Gene;gene=nadA;gene_biotype=pseudogene;locus_tag=J4731_09075;pseudo=true
JAGETS010000017.1	Protein Homology	CDS	43964	44990	.	+	0	ID=cds-J4731_09075;Parent=gene-J4731_09075;Note=frameshifted;gbkey=CDS;gene=nadA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004917794.1;locus_tag=J4731_09075;product=quinolinate synthase NadA;pseudo=true;transl_table=11
JAGETS010000017.1	Genbank	pseudogene	45057	45915	.	+	.	ID=gene-J4731_09080;Name=J4731_09080;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_09080;pseudo=true
JAGETS010000017.1	Protein Homology	CDS	45057	45915	.	+	0	ID=cds-J4731_09080;Parent=gene-J4731_09080;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000345410.1;locus_tag=J4731_09080;product=nicotinamide riboside transporter PnuC;pseudo=true;transl_table=11
JAGETS010000017.1	Genbank	pseudogene	46125	47169	.	+	.	ID=gene-J4731_09085;Name=aroG;gbkey=Gene;gene=aroG;gene_biotype=pseudogene;locus_tag=J4731_09085;pseudo=true
JAGETS010000017.1	Protein Homology	CDS	46125	47169	.	+	0	ID=cds-J4731_09085;Parent=gene-J4731_09085;Note=frameshifted;gbkey=CDS;gene=aroG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004244442.1;locus_tag=J4731_09085;product=3-deoxy-7-phosphoheptulonate synthase AroG;pseudo=true;transl_table=11
JAGETS010000017.1	Genbank	gene	47365	47547	.	+	.	ID=gene-J4731_09090;Name=J4731_09090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_09090
JAGETS010000017.1	GeneMarkS-2+	CDS	47365	47547	.	+	0	ID=cds-MBO1929093.1;Parent=gene-J4731_09090;Dbxref=NCBI_GP:MBO1929093.1;Name=MBO1929093.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_09090;product=hypothetical protein;protein_id=MBO1929093.1;transl_table=11
JAGETS010000017.1	Genbank	gene	47516	47773	.	+	.	ID=gene-J4731_09095;Name=J4731_09095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_09095
JAGETS010000017.1	GeneMarkS-2+	CDS	47516	47773	.	+	0	ID=cds-MBO1929094.1;Parent=gene-J4731_09095;Dbxref=NCBI_GP:MBO1929094.1;Name=MBO1929094.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_09095;product=hypothetical protein;protein_id=MBO1929094.1;transl_table=11
JAGETS010000017.1	Genbank	pseudogene	48347	49085	.	-	.	ID=gene-J4731_09100;Name=J4731_09100;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_09100;pseudo=true
JAGETS010000017.1	Protein Homology	CDS	48347	49085	.	-	0	ID=cds-J4731_09100;Parent=gene-J4731_09100;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004256754.1;locus_tag=J4731_09100;product=hypothetical protein;pseudo=true;transl_table=11
JAGETS010000017.1	Genbank	pseudogene	49244	49993	.	-	.	ID=gene-J4731_09105;Name=gpmA;gbkey=Gene;gene=gpmA;gene_biotype=pseudogene;locus_tag=J4731_09105;pseudo=true
JAGETS010000017.1	Protein Homology	CDS	49244	49993	.	-	0	ID=cds-J4731_09105;Parent=gene-J4731_09105;Note=frameshifted;gbkey=CDS;gene=gpmA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000301556.1;locus_tag=J4731_09105;product=2%2C3-diphosphoglycerate-dependent phosphoglycerate mutase;pseudo=true;transl_table=11
JAGETS010000017.1	Genbank	gene	51367	51687	.	+	.	ID=gene-J4731_09110;Name=J4731_09110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_09110
JAGETS010000017.1	Protein Homology	CDS	51367	51687	.	+	0	ID=cds-MBO1929095.1;Parent=gene-J4731_09110;Dbxref=NCBI_GP:MBO1929095.1;Name=MBO1929095.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004256746.1;locus_tag=J4731_09110;product=PTS sugar transporter subunit IIC;protein_id=MBO1929095.1;transl_table=11
JAGETS010000017.1	Genbank	pseudogene	51733	52742	.	+	.	ID=gene-J4731_09115;Name=J4731_09115;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_09115;pseudo=true
JAGETS010000017.1	Protein Homology	CDS	51733	52742	.	+	0	ID=cds-J4731_09115;Parent=gene-J4731_09115;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008458093.1;locus_tag=J4731_09115;product=PTS fructose transporter subunit IIC;pseudo=true;transl_table=11
JAGETS010000017.1	Genbank	pseudogene	52832	55380	.	+	.	ID=gene-J4731_09120;Name=J4731_09120;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_09120;pseudo=true
JAGETS010000017.1	Protein Homology	CDS	52832	55380	.	+	0	ID=cds-J4731_09120;Parent=gene-J4731_09120;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004256741.1;locus_tag=J4731_09120;product=alpha-mannosidase;pseudo=true;transl_table=11
JAGETS010000017.1	Genbank	pseudogene	55397	56933	.	+	.	ID=gene-J4731_09125;Name=J4731_09125;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_09125;pseudo=true
JAGETS010000017.1	Protein Homology	CDS	55397	56933	.	+	0	ID=cds-J4731_09125;Parent=gene-J4731_09125;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004256738.1;locus_tag=J4731_09125;product=PTS sugar transporter subunit IIA;pseudo=true;transl_table=11
JAGETS010000017.1	Genbank	pseudogene	57125	57808	.	+	.	ID=gene-J4731_09130;Name=J4731_09130;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_09130;pseudo=true
JAGETS010000017.1	Protein Homology	CDS	57125	57808	.	+	0	ID=cds-J4731_09130;Parent=gene-J4731_09130;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004256737.1;locus_tag=J4731_09130;product=porin;pseudo=true;transl_table=11
JAGETS010000017.1	Genbank	gene	57841	58065	.	+	.	ID=gene-J4731_09135;Name=J4731_09135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_09135
JAGETS010000017.1	GeneMarkS-2+	CDS	57841	58065	.	+	0	ID=cds-MBO1929096.1;Parent=gene-J4731_09135;Dbxref=NCBI_GP:MBO1929096.1;Name=MBO1929096.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_09135;product=hypothetical protein;protein_id=MBO1929096.1;transl_table=11
JAGETS010000017.1	Genbank	gene	58050	58349	.	+	.	ID=gene-J4731_09140;Name=J4731_09140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_09140
JAGETS010000017.1	Protein Homology	CDS	58050	58349	.	+	0	ID=cds-MBO1929097.1;Parent=gene-J4731_09140;Dbxref=NCBI_GP:MBO1929097.1;Name=MBO1929097.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012376.1;locus_tag=J4731_09140;product=metallophosphoesterase;protein_id=MBO1929097.1;transl_table=11
JAGETS010000017.1	Genbank	gene	58454	58654	.	+	.	ID=gene-J4731_09145;Name=J4731_09145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_09145
JAGETS010000017.1	GeneMarkS-2+	CDS	58454	58654	.	+	0	ID=cds-MBO1929098.1;Parent=gene-J4731_09145;Dbxref=NCBI_GP:MBO1929098.1;Name=MBO1929098.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_09145;product=hypothetical protein;protein_id=MBO1929098.1;transl_table=11
JAGETS010000017.1	Genbank	gene	58808	59074	.	+	.	ID=gene-J4731_09150;Name=J4731_09150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_09150
JAGETS010000017.1	GeneMarkS-2+	CDS	58808	59074	.	+	0	ID=cds-MBO1929099.1;Parent=gene-J4731_09150;Dbxref=NCBI_GP:MBO1929099.1;Name=MBO1929099.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_09150;product=hypothetical protein;protein_id=MBO1929099.1;transl_table=11
JAGETS010000017.1	Genbank	gene	59243	59470	.	+	.	ID=gene-J4731_09155;Name=J4731_09155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_09155
JAGETS010000017.1	GeneMarkS-2+	CDS	59243	59470	.	+	0	ID=cds-MBO1929100.1;Parent=gene-J4731_09155;Dbxref=NCBI_GP:MBO1929100.1;Name=MBO1929100.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_09155;product=hypothetical protein;protein_id=MBO1929100.1;transl_table=11
JAGETS010000017.1	Genbank	gene	59618	59941	.	+	.	ID=gene-J4731_09160;Name=J4731_09160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_09160
JAGETS010000017.1	GeneMarkS-2+	CDS	59618	59941	.	+	0	ID=cds-MBO1929101.1;Parent=gene-J4731_09160;Dbxref=NCBI_GP:MBO1929101.1;Name=MBO1929101.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_09160;product=hypothetical protein;protein_id=MBO1929101.1;transl_table=11
JAGETS010000017.1	Genbank	pseudogene	60050	60770	.	-	.	ID=gene-J4731_09165;Name=J4731_09165;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_09165;pseudo=true
JAGETS010000017.1	Protein Homology	CDS	60050	60770	.	-	0	ID=cds-J4731_09165;Parent=gene-J4731_09165;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019082687.1;locus_tag=J4731_09165;product=CPBP family intramembrane metalloprotease;pseudo=true;transl_table=11
JAGETS010000017.1	Genbank	gene	60665	60889	.	-	.	ID=gene-J4731_09170;Name=J4731_09170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_09170
JAGETS010000017.1	GeneMarkS-2+	CDS	60665	60889	.	-	0	ID=cds-MBO1929102.1;Parent=gene-J4731_09170;Dbxref=NCBI_GP:MBO1929102.1;Name=MBO1929102.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_09170;product=hypothetical protein;protein_id=MBO1929102.1;transl_table=11
JAGETS010000017.1	Genbank	pseudogene	61032	61728	.	-	.	ID=gene-J4731_09175;Name=J4731_09175;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_09175;pseudo=true
JAGETS010000017.1	Protein Homology	CDS	61032	61728	.	-	0	ID=cds-J4731_09175;Parent=gene-J4731_09175;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013183843.1;locus_tag=J4731_09175;product=ATP-binding cassette domain-containing protein;pseudo=true;transl_table=11
JAGETS010000017.1	Genbank	pseudogene	62675	63422	.	-	.	ID=gene-J4731_09180;Name=J4731_09180;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_09180;pseudo=true
JAGETS010000017.1	Protein Homology	CDS	62675	63422	.	-	0	ID=cds-J4731_09180;Parent=gene-J4731_09180;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013649518.1;locus_tag=J4731_09180;product=LysR family transcriptional regulator;pseudo=true;transl_table=11
JAGETS010000017.1	Genbank	gene	64606	64935	.	-	.	ID=gene-J4731_09185;Name=J4731_09185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_09185
JAGETS010000017.1	GeneMarkS-2+	CDS	64606	64935	.	-	0	ID=cds-MBO1929103.1;Parent=gene-J4731_09185;Dbxref=NCBI_GP:MBO1929103.1;Name=MBO1929103.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_09185;product=hypothetical protein;protein_id=MBO1929103.1;transl_table=11
JAGETS010000017.1	Genbank	pseudogene	65256	65968	.	+	.	ID=gene-J4731_09190;Name=modA;gbkey=Gene;gene=modA;gene_biotype=pseudogene;locus_tag=J4731_09190;pseudo=true
JAGETS010000017.1	Protein Homology	CDS	65256	65968	.	+	0	ID=cds-J4731_09190;Parent=gene-J4731_09190;Note=frameshifted%3B internal stop;gbkey=CDS;gene=modA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012987591.1;locus_tag=J4731_09190;product=molybdate ABC transporter substrate-binding protein;pseudo=true;transl_table=11
JAGETS010000017.1	Genbank	pseudogene	65993	66651	.	+	.	ID=gene-J4731_09195;Name=modB;gbkey=Gene;gene=modB;gene_biotype=pseudogene;locus_tag=J4731_09195;pseudo=true
JAGETS010000017.1	Protein Homology	CDS	65993	66651	.	+	0	ID=cds-J4731_09195;Parent=gene-J4731_09195;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;gene=modB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004256724.1;locus_tag=J4731_09195;product=molybdate ABC transporter permease subunit;pseudo=true;transl_table=11
JAGETS010000017.1	Genbank	pseudogene	66673	67699	.	+	.	ID=gene-J4731_09200;Name=modC;gbkey=Gene;gene=modC;gene_biotype=pseudogene;locus_tag=J4731_09200;pseudo=true
JAGETS010000017.1	Protein Homology	CDS	66673	67699	.	+	0	ID=cds-J4731_09200;Parent=gene-J4731_09200;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;gene=modC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210758.1;locus_tag=J4731_09200;product=molybdenum ABC transporter ATP-binding protein ModC;pseudo=true;transl_table=11
JAGETS010000017.1	Genbank	pseudogene	67857	68632	.	-	.	ID=gene-J4731_09205;Name=J4731_09205;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_09205;pseudo=true
JAGETS010000017.1	Protein Homology	CDS	67857	68632	.	-	0	ID=cds-J4731_09205;Parent=gene-J4731_09205;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004917819.1;locus_tag=J4731_09205;product=pyridoxal phosphatase;pseudo=true;transl_table=11
JAGETS010000017.1	Genbank	pseudogene	68925	69905	.	+	.	ID=gene-J4731_09210;Name=pgl;gbkey=Gene;gene=pgl;gene_biotype=pseudogene;locus_tag=J4731_09210;pseudo=true
JAGETS010000017.1	Protein Homology	CDS	68925	69905	.	+	0	ID=cds-J4731_09210;Parent=gene-J4731_09210;Note=frameshifted;gbkey=CDS;gene=pgl;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010848273.1;locus_tag=J4731_09210;product=6-phosphogluconolactonase;pseudo=true;transl_table=11
JAGETS010000017.1	Genbank	pseudogene	70067	71328	.	-	.	ID=gene-J4731_09215;Name=bioA;gbkey=Gene;gene=bioA;gene_biotype=pseudogene;locus_tag=J4731_09215;pseudo=true
JAGETS010000017.1	Protein Homology	CDS	70067	71328	.	-	0	ID=cds-J4731_09215;Parent=gene-J4731_09215;Note=frameshifted%3B internal stop;gbkey=CDS;gene=bioA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004917823.1;locus_tag=J4731_09215;product=adenosylmethionine--8-amino-7-oxononanoate transaminase;pseudo=true;transl_table=11
JAGETS010000017.1	Genbank	pseudogene	71421	72454	.	+	.	ID=gene-J4731_09220;Name=bioB;gbkey=Gene;gene=bioB;gene_biotype=pseudogene;locus_tag=J4731_09220;pseudo=true
JAGETS010000017.1	Protein Homology	CDS	71421	72454	.	+	0	ID=cds-J4731_09220;Parent=gene-J4731_09220;Note=frameshifted;gbkey=CDS;gene=bioB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011145787.1;locus_tag=J4731_09220;product=biotin synthase BioB;pseudo=true;transl_table=11
JAGETS010000017.1	Genbank	pseudogene	72454	73604	.	+	.	ID=gene-J4731_09225;Name=bioF;gbkey=Gene;gene=bioF;gene_biotype=pseudogene;locus_tag=J4731_09225;pseudo=true
JAGETS010000017.1	Protein Homology	CDS	72454	73604	.	+	0	ID=cds-J4731_09225;Parent=gene-J4731_09225;Note=frameshifted%3B internal stop;gbkey=CDS;gene=bioF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006660185.1;locus_tag=J4731_09225;product=8-amino-7-oxononanoate synthase;pseudo=true;transl_table=11
JAGETS010000017.1	Genbank	pseudogene	73582	74361	.	+	.	ID=gene-J4731_09230;Name=bioC;gbkey=Gene;gene=bioC;gene_biotype=pseudogene;locus_tag=J4731_09230;pseudo=true
JAGETS010000017.1	Protein Homology	CDS	73582	74361	.	+	0	ID=cds-J4731_09230;Parent=gene-J4731_09230;Note=frameshifted;gbkey=CDS;gene=bioC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006708073.1;locus_tag=J4731_09230;product=malonyl-ACP O-methyltransferase BioC;pseudo=true;transl_table=11
JAGETS010000017.1	Genbank	pseudogene	74354	75025	.	+	.	ID=gene-J4731_09235;Name=bioD;gbkey=Gene;gene=bioD;gene_biotype=pseudogene;locus_tag=J4731_09235;pseudo=true
JAGETS010000017.1	Protein Homology	CDS	74354	75025	.	+	0	ID=cds-J4731_09235;Parent=gene-J4731_09235;Note=frameshifted;gbkey=CDS;gene=bioD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004256682.1;locus_tag=J4731_09235;product=ATP-dependent dethiobiotin synthetase BioD;pseudo=true;transl_table=11
JAGETS010000017.1	Genbank	pseudogene	75649	77813	.	+	.	ID=gene-J4731_09240;Name=uvrB;gbkey=Gene;gene=uvrB;gene_biotype=pseudogene;locus_tag=J4731_09240;pseudo=true
JAGETS010000017.1	Protein Homology	CDS	75649	77813	.	+	0	ID=cds-J4731_09240;Parent=gene-J4731_09240;Note=frameshifted%3B internal stop;gbkey=CDS;gene=uvrB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012005751.1;locus_tag=J4731_09240;product=excinuclease ABC subunit B;pseudo=true;transl_table=11
JAGETS010000017.1	Genbank	pseudogene	77865	78757	.	-	.	ID=gene-J4731_09245;Name=yvcK;gbkey=Gene;gene=yvcK;gene_biotype=pseudogene;locus_tag=J4731_09245;pseudo=true
JAGETS010000017.1	Protein Homology	CDS	77865	78757	.	-	0	ID=cds-J4731_09245;Parent=gene-J4731_09245;Note=frameshifted;gbkey=CDS;gene=yvcK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006660177.1;locus_tag=J4731_09245;product=uridine diphosphate-N-acetylglucosamine-binding protein YvcK;pseudo=true;transl_table=11
JAGETS010000017.1	cmsearch	riboswitch	79396	79534	.	+	.	ID=id-JAGETS010000017.1:79396..79534;Dbxref=RFAM:RF01055;Note=molybdenum cofactor riboswitch;bound_moiety=molybdenum cofactor;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch
JAGETS010000017.1	Genbank	pseudogene	79524	80490	.	+	.	ID=gene-J4731_09250;Name=moaA;gbkey=Gene;gene=moaA;gene_biotype=pseudogene;locus_tag=J4731_09250;pseudo=true
JAGETS010000017.1	Protein Homology	CDS	79524	80490	.	+	0	ID=cds-J4731_09250;Parent=gene-J4731_09250;Note=frameshifted%3B internal stop;gbkey=CDS;gene=moaA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014657771.1;locus_tag=J4731_09250;product=GTP 3'%2C8-cyclase MoaA;pseudo=true;transl_table=11
JAGETS010000017.1	Genbank	pseudogene	80514	80986	.	+	.	ID=gene-J4731_09255;Name=moaC;gbkey=Gene;gene=moaC;gene_biotype=pseudogene;locus_tag=J4731_09255;pseudo=true
JAGETS010000017.1	Protein Homology	CDS	80514	80986	.	+	0	ID=cds-J4731_09255;Parent=gene-J4731_09255;Note=frameshifted;gbkey=CDS;gene=moaC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007681095.1;locus_tag=J4731_09255;product=cyclic pyranopterin monophosphate synthase MoaC;pseudo=true;transl_table=11
JAGETS010000017.1	Genbank	pseudogene	80997	81219	.	+	.	ID=gene-J4731_09260;Name=moaD;gbkey=Gene;gene=moaD;gene_biotype=pseudogene;locus_tag=J4731_09260;pseudo=true
JAGETS010000017.1	Protein Homology	CDS	80997	81219	.	+	0	ID=cds-J4731_09260;Parent=gene-J4731_09260;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;gene=moaD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006660173.1;locus_tag=J4731_09260;product=molybdopterin synthase sulfur carrier subunit;pseudo=true;transl_table=11
JAGETS010000017.1	Genbank	pseudogene	81226	81672	.	+	.	ID=gene-J4731_09265;Name=moaE;gbkey=Gene;gene=moaE;gene_biotype=pseudogene;locus_tag=J4731_09265;pseudo=true
JAGETS010000017.1	Protein Homology	CDS	81226	81672	.	+	0	ID=cds-J4731_09265;Parent=gene-J4731_09265;Note=frameshifted;gbkey=CDS;gene=moaE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004256668.1;locus_tag=J4731_09265;product=molybdopterin synthase catalytic subunit MoaE;pseudo=true;transl_table=11
JAGETS010000017.1	Genbank	pseudogene	81803	82506	.	+	.	ID=gene-J4731_09270;Name=J4731_09270;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_09270;pseudo=true
JAGETS010000017.1	Protein Homology	CDS	81803	82506	.	+	0	ID=cds-J4731_09270;Parent=gene-J4731_09270;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210775.1;locus_tag=J4731_09270;product=Bax inhibitor-1/YccA family protein;pseudo=true;transl_table=11
JAGETS010000017.1	Genbank	pseudogene	82715	83817	.	-	.	ID=gene-J4731_09275;Name=J4731_09275;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_09275;pseudo=true
JAGETS010000017.1	Protein Homology	CDS	82715	83817	.	-	0	ID=cds-J4731_09275;Parent=gene-J4731_09275;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004713409.1;locus_tag=J4731_09275;product=ABC transporter permease;pseudo=true;transl_table=11
JAGETS010000017.1	Genbank	pseudogene	83826	84956	.	-	.	ID=gene-J4731_09280;Name=J4731_09280;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_09280;pseudo=true
JAGETS010000017.1	Protein Homology	CDS	83826	84956	.	-	0	ID=cds-J4731_09280;Parent=gene-J4731_09280;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008912027.1;locus_tag=J4731_09280;product=ABC transporter permease;pseudo=true;transl_table=11
JAGETS010000017.1	Genbank	pseudogene	84953	86522	.	-	.	ID=gene-J4731_09285;Name=J4731_09285;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_09285;pseudo=true
JAGETS010000017.1	Protein Homology	CDS	84953	86522	.	-	0	ID=cds-J4731_09285;Parent=gene-J4731_09285;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014883091.1;locus_tag=J4731_09285;product=ABC transporter ATP-binding protein;pseudo=true;transl_table=11
JAGETS010000017.1	Genbank	pseudogene	86679	87657	.	-	.	ID=gene-J4731_09290;Name=hlyD;gbkey=Gene;gene=hlyD;gene_biotype=pseudogene;locus_tag=J4731_09290;pseudo=true
JAGETS010000017.1	Protein Homology	CDS	86679	87657	.	-	0	ID=cds-J4731_09290;Parent=gene-J4731_09290;Note=frameshifted%3B internal stop;gbkey=CDS;gene=hlyD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012987532.1;locus_tag=J4731_09290;product=secretion protein HlyD;pseudo=true;transl_table=11
JAGETS010000017.1	Genbank	pseudogene	87810	88488	.	-	.	ID=gene-J4731_09295;Name=cecR;gbkey=Gene;gene=cecR;gene_biotype=pseudogene;locus_tag=J4731_09295;pseudo=true
JAGETS010000017.1	Protein Homology	CDS	87810	88488	.	-	0	ID=cds-J4731_09295;Parent=gene-J4731_09295;Note=frameshifted%3B internal stop;gbkey=CDS;gene=cecR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006662282.1;locus_tag=J4731_09295;product=transcriptional regulator CecR;pseudo=true;transl_table=11
JAGETS010000017.1	Genbank	pseudogene	88774	90089	.	+	.	ID=gene-J4731_09300;Name=rhlE;gbkey=Gene;gene=rhlE;gene_biotype=pseudogene;locus_tag=J4731_09300;pseudo=true
JAGETS010000017.1	Protein Homology	CDS	88774	90089	.	+	0	ID=cds-J4731_09300;Parent=gene-J4731_09300;Note=frameshifted;gbkey=CDS;gene=rhlE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004256606.1;locus_tag=J4731_09300;product=ATP-dependent RNA helicase RhlE;pseudo=true;transl_table=11
JAGETS010000017.1	Genbank	pseudogene	90257	91143	.	+	.	ID=gene-J4731_09305;Name=dusC;gbkey=Gene;gene=dusC;gene_biotype=pseudogene;locus_tag=J4731_09305;pseudo=true
JAGETS010000017.1	Protein Homology	CDS	90257	91143	.	+	0	ID=cds-J4731_09305;Parent=gene-J4731_09305;Note=frameshifted%3B internal stop;gbkey=CDS;gene=dusC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012987529.1;locus_tag=J4731_09305;product=tRNA dihydrouridine(16) synthase DusC;pseudo=true;transl_table=11
JAGETS010000017.1	Genbank	gene	91411	91599	.	+	.	ID=gene-J4731_09310;Name=J4731_09310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_09310
JAGETS010000017.1	Protein Homology	CDS	91411	91599	.	+	0	ID=cds-MBO1929104.1;Parent=gene-J4731_09310;Dbxref=NCBI_GP:MBO1929104.1;Name=MBO1929104.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004235708.1;locus_tag=J4731_09310;product=GlsB/YeaQ/YmgE family stress response membrane protein;protein_id=MBO1929104.1;transl_table=11
JAGETS010000017.1	Genbank	pseudogene	91679	92517	.	-	.	ID=gene-J4731_09315;Name=sseA;gbkey=Gene;gene=sseA;gene_biotype=pseudogene;locus_tag=J4731_09315;pseudo=true
JAGETS010000017.1	Protein Homology	CDS	91679	92517	.	-	0	ID=cds-J4731_09315;Parent=gene-J4731_09315;Note=frameshifted;gbkey=CDS;gene=sseA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004917864.1;locus_tag=J4731_09315;product=3-mercaptopyruvate sulfurtransferase;pseudo=true;transl_table=11
JAGETS010000017.1	Genbank	gene	92556	92693	.	-	.	ID=gene-J4731_09320;Name=J4731_09320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_09320
JAGETS010000017.1	GeneMarkS-2+	CDS	92556	92693	.	-	0	ID=cds-MBO1929105.1;Parent=gene-J4731_09320;Dbxref=NCBI_GP:MBO1929105.1;Name=MBO1929105.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_09320;product=hypothetical protein;protein_id=MBO1929105.1;transl_table=11
JAGETS010000017.1	Genbank	pseudogene	92971	95068	.	+	.	ID=gene-J4731_09325;Name=dinG;gbkey=Gene;gene=dinG;gene_biotype=pseudogene;locus_tag=J4731_09325;pseudo=true
JAGETS010000017.1	Protein Homology	CDS	92971	95068	.	+	0	ID=cds-J4731_09325;Parent=gene-J4731_09325;Note=frameshifted;gbkey=CDS;gene=dinG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004256574.1;locus_tag=J4731_09325;product=ATP-dependent DNA helicase DinG;pseudo=true;transl_table=11
JAGETS010000017.1	Genbank	pseudogene	95192	95693	.	-	.	ID=gene-J4731_09330;Name=dps;gbkey=Gene;gene=dps;gene_biotype=pseudogene;gene_synonym=pexB;locus_tag=J4731_09330;pseudo=true
JAGETS010000017.1	Protein Homology	CDS	95192	95693	.	-	0	ID=cds-J4731_09330;Parent=gene-J4731_09330;Note=frameshifted;gbkey=CDS;gene=dps;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005187524.1;locus_tag=J4731_09330;product=DNA starvation/stationary phase protection protein Dps;pseudo=true;transl_table=11
JAGETS010000017.1	Genbank	pseudogene	96040	96910	.	-	.	ID=gene-J4731_09335;Name=rhtA;gbkey=Gene;gene=rhtA;gene_biotype=pseudogene;locus_tag=J4731_09335;pseudo=true
JAGETS010000017.1	Protein Homology	CDS	96040	96910	.	-	0	ID=cds-J4731_09335;Parent=gene-J4731_09335;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;gene=rhtA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004917873.1;locus_tag=J4731_09335;product=threonine/homoserine exporter RhtA;pseudo=true;transl_table=11
JAGETS010000017.1	Genbank	pseudogene	97233	97801	.	+	.	ID=gene-J4731_09340;Name=J4731_09340;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_09340;pseudo=true
JAGETS010000017.1	Protein Homology	CDS	97233	97801	.	+	0	ID=cds-J4731_09340;Parent=gene-J4731_09340;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006537557.1;locus_tag=J4731_09340;product=TIGR00730 family Rossman fold protein;pseudo=true;transl_table=11
JAGETS010000017.1	Genbank	gene	97832	98290	.	+	.	ID=gene-J4731_09345;Name=J4731_09345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_09345
JAGETS010000017.1	Protein Homology	CDS	97832	98290	.	+	0	ID=cds-MBO1929106.1;Parent=gene-J4731_09345;Dbxref=NCBI_GP:MBO1929106.1;Name=MBO1929106.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006662280.1;locus_tag=J4731_09345;product=GNAT family N-acetyltransferase;protein_id=MBO1929106.1;transl_table=11
JAGETS010000017.1	Genbank	pseudogene	98526	100117	.	+	.	ID=gene-J4731_09350;Name=J4731_09350;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_09350;pseudo=true
JAGETS010000017.1	Protein Homology	CDS	98526	100117	.	+	0	ID=cds-J4731_09350;Parent=gene-J4731_09350;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016486587.1;locus_tag=J4731_09350;product=ABC-F family ATPase;pseudo=true;transl_table=11
JAGETS010000017.1	Genbank	pseudogene	100185	100519	.	-	.	ID=gene-J4731_09355;Name=J4731_09355;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_09355;pseudo=true
JAGETS010000017.1	Protein Homology	CDS	100185	100519	.	-	0	ID=cds-J4731_09355;Parent=gene-J4731_09355;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313117.1;locus_tag=J4731_09355;product=phnA family protein;pseudo=true;transl_table=11
JAGETS010000017.1	Genbank	pseudogene	100727	101453	.	-	.	ID=gene-J4731_09360;Name=moeB;gbkey=Gene;gene=moeB;gene_biotype=pseudogene;locus_tag=J4731_09360;pseudo=true
JAGETS010000017.1	Protein Homology	CDS	100727	101453	.	-	0	ID=cds-J4731_09360;Parent=gene-J4731_09360;Note=frameshifted;gbkey=CDS;gene=moeB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020457151.1;locus_tag=J4731_09360;product=molybdopterin-synthase adenylyltransferase MoeB;pseudo=true;transl_table=11
JAGETS010000017.1	Genbank	pseudogene	101483	102717	.	-	.	ID=gene-J4731_09365;Name=moeA;gbkey=Gene;gene=moeA;gene_biotype=pseudogene;locus_tag=J4731_09365;pseudo=true
JAGETS010000017.1	Protein Homology	CDS	101483	102717	.	-	0	ID=cds-J4731_09365;Parent=gene-J4731_09365;Note=frameshifted;gbkey=CDS;gene=moeA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004256562.1;locus_tag=J4731_09365;product=molybdopterin molybdotransferase MoeA;pseudo=true;transl_table=11
JAGETS010000017.1	Genbank	pseudogene	103164	103822	.	+	.	ID=gene-J4731_09370;Name=folE;gbkey=Gene;gene=folE;gene_biotype=pseudogene;locus_tag=J4731_09370;pseudo=true
JAGETS010000017.1	Protein Homology	CDS	103164	103822	.	+	0	ID=cds-J4731_09370;Parent=gene-J4731_09370;Note=frameshifted;gbkey=CDS;gene=folE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006660151.1;locus_tag=J4731_09370;product=GTP cyclohydrolase I FolE;pseudo=true;transl_table=11
JAGETS010000017.1	Genbank	pseudogene	103826	104946	.	+	.	ID=gene-J4731_09375;Name=J4731_09375;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_09375;pseudo=true
JAGETS010000017.1	Protein Homology	CDS	103826	104946	.	+	0	ID=cds-J4731_09375;Parent=gene-J4731_09375;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006660150.1;locus_tag=J4731_09375;product=DUF418 domain-containing protein;pseudo=true;transl_table=11
JAGETS010000017.1	Genbank	gene	105288	105506	.	+	.	ID=gene-J4731_09380;Name=J4731_09380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_09380
JAGETS010000017.1	GeneMarkS-2+	CDS	105288	105506	.	+	0	ID=cds-MBO1929107.1;Parent=gene-J4731_09380;Dbxref=NCBI_GP:MBO1929107.1;Name=MBO1929107.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_09380;product=hypothetical protein;protein_id=MBO1929107.1;transl_table=11
JAGETS010000017.1	Genbank	pseudogene	106226	106878	.	+	.	ID=gene-J4731_09385;Name=J4731_09385;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_09385;pseudo=true
JAGETS010000017.1	Protein Homology	CDS	106226	106878	.	+	0	ID=cds-J4731_09385;Parent=gene-J4731_09385;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004256557.1;locus_tag=J4731_09385;product=endoxylanase;pseudo=true;transl_table=11
JAGETS010000017.1	Genbank	pseudogene	107039	107943	.	+	.	ID=gene-J4731_09390;Name=J4731_09390;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_09390;pseudo=true
JAGETS010000017.1	Protein Homology	CDS	107039	107943	.	+	0	ID=cds-J4731_09390;Parent=gene-J4731_09390;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004256554.1;locus_tag=J4731_09390;product=N-acetylmuramic acid 6-phosphate etherase;pseudo=true;transl_table=11
JAGETS010000017.1	Genbank	pseudogene	107998	109343	.	+	.	ID=gene-J4731_09395;Name=J4731_09395;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_09395;pseudo=true
JAGETS010000017.1	Protein Homology	CDS	107998	109343	.	+	0	ID=cds-J4731_09395;Parent=gene-J4731_09395;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246145.1;locus_tag=J4731_09395;product=PTS transporter subunit EIIC;pseudo=true;transl_table=11
JAGETS010000017.1	Genbank	pseudogene	109359	110182	.	+	.	ID=gene-J4731_09400;Name=J4731_09400;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_09400;pseudo=true
JAGETS010000017.1	Protein Homology	CDS	109359	110182	.	+	0	ID=cds-J4731_09400;Parent=gene-J4731_09400;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006657359.1;locus_tag=J4731_09400;product=MurR/RpiR family transcriptional regulator;pseudo=true;transl_table=11
JAGETS010000017.1	Genbank	pseudogene	110199	110961	.	+	.	ID=gene-J4731_09405;Name=J4731_09405;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_09405;pseudo=true
JAGETS010000017.1	Protein Homology	CDS	110199	110961	.	+	0	ID=cds-J4731_09405;Parent=gene-J4731_09405;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004256546.1;locus_tag=J4731_09405;product=sulfite exporter TauE/SafE family protein;pseudo=true;transl_table=11
JAGETS010000017.1	Genbank	pseudogene	111025	111829	.	-	.	ID=gene-J4731_09410;Name=J4731_09410;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_09410;pseudo=true
JAGETS010000017.1	Protein Homology	CDS	111025	111829	.	-	0	ID=cds-J4731_09410;Parent=gene-J4731_09410;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004917931.1;locus_tag=J4731_09410;product=rhomboid family intramembrane serine protease;pseudo=true;transl_table=11
JAGETS010000017.1	Genbank	pseudogene	112198	113731	.	-	.	ID=gene-J4731_09415;Name=J4731_09415;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_09415;pseudo=true
JAGETS010000017.1	Protein Homology	CDS	112198	113731	.	-	0	ID=cds-J4731_09415;Parent=gene-J4731_09415;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013096504.1;locus_tag=J4731_09415;product=NAD-dependent malic enzyme;pseudo=true;transl_table=11
JAGETS010000017.1	Genbank	gene	114596	114793	.	+	.	ID=gene-J4731_09420;Name=J4731_09420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_09420
JAGETS010000017.1	GeneMarkS-2+	CDS	114596	114793	.	+	0	ID=cds-MBO1929108.1;Parent=gene-J4731_09420;Dbxref=NCBI_GP:MBO1929108.1;Name=MBO1929108.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_09420;product=hypothetical protein;protein_id=MBO1929108.1;transl_table=11
JAGETS010000017.1	Genbank	gene	115226	115516	.	+	.	ID=gene-J4731_09425;Name=J4731_09425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_09425
JAGETS010000017.1	GeneMarkS-2+	CDS	115226	115516	.	+	0	ID=cds-MBO1929109.1;Parent=gene-J4731_09425;Dbxref=NCBI_GP:MBO1929109.1;Name=MBO1929109.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_09425;product=hypothetical protein;protein_id=MBO1929109.1;transl_table=11
JAGETS010000017.1	Genbank	gene	115658	115960	.	+	.	ID=gene-J4731_09430;Name=J4731_09430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_09430
JAGETS010000017.1	GeneMarkS-2+	CDS	115658	115960	.	+	0	ID=cds-MBO1929110.1;Parent=gene-J4731_09430;Dbxref=NCBI_GP:MBO1929110.1;Name=MBO1929110.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_09430;product=hypothetical protein;protein_id=MBO1929110.1;transl_table=11
JAGETS010000017.1	Genbank	gene	116389	116820	.	+	.	ID=gene-J4731_09435;Name=J4731_09435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_09435
JAGETS010000017.1	GeneMarkS-2+	CDS	116389	116820	.	+	0	ID=cds-MBO1929111.1;Parent=gene-J4731_09435;Dbxref=NCBI_GP:MBO1929111.1;Name=MBO1929111.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_09435;product=hypothetical protein;protein_id=MBO1929111.1;transl_table=11
JAGETS010000017.1	Genbank	gene	117075	117392	.	+	.	ID=gene-J4731_09440;Name=J4731_09440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_09440
JAGETS010000017.1	GeneMarkS-2+	CDS	117075	117392	.	+	0	ID=cds-MBO1929112.1;Parent=gene-J4731_09440;Dbxref=NCBI_GP:MBO1929112.1;Name=MBO1929112.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_09440;product=hypothetical protein;protein_id=MBO1929112.1;transl_table=11
JAGETS010000017.1	Genbank	gene	118059	118418	.	+	.	ID=gene-J4731_09445;Name=J4731_09445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_09445
JAGETS010000017.1	GeneMarkS-2+	CDS	118059	118418	.	+	0	ID=cds-MBO1929113.1;Parent=gene-J4731_09445;Dbxref=NCBI_GP:MBO1929113.1;Name=MBO1929113.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_09445;product=hypothetical protein;protein_id=MBO1929113.1;transl_table=11
JAGETS010000017.1	Genbank	gene	118896	119288	.	+	.	ID=gene-J4731_09450;Name=J4731_09450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_09450
JAGETS010000017.1	GeneMarkS-2+	CDS	118896	119288	.	+	0	ID=cds-MBO1929114.1;Parent=gene-J4731_09450;Dbxref=NCBI_GP:MBO1929114.1;Name=MBO1929114.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_09450;product=hypothetical protein;protein_id=MBO1929114.1;transl_table=11
JAGETS010000017.1	Genbank	gene	119556	119777	.	+	.	ID=gene-J4731_09455;Name=J4731_09455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_09455
JAGETS010000017.1	GeneMarkS-2+	CDS	119556	119777	.	+	0	ID=cds-MBO1929115.1;Parent=gene-J4731_09455;Dbxref=NCBI_GP:MBO1929115.1;Name=MBO1929115.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_09455;product=hypothetical protein;protein_id=MBO1929115.1;transl_table=11
JAGETS010000017.1	Genbank	gene	120033	120326	.	-	.	ID=gene-J4731_09460;Name=J4731_09460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_09460
JAGETS010000017.1	Protein Homology	CDS	120033	120326	.	-	0	ID=cds-MBO1929116.1;Parent=gene-J4731_09460;Dbxref=NCBI_GP:MBO1929116.1;Name=MBO1929116.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019818.1;locus_tag=J4731_09460;product=hypothetical protein;protein_id=MBO1929116.1;transl_table=11
JAGETS010000017.1	Genbank	gene	120746	120886	.	-	.	ID=gene-J4731_09465;Name=J4731_09465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_09465
JAGETS010000017.1	GeneMarkS-2+	CDS	120746	120886	.	-	0	ID=cds-MBO1929117.1;Parent=gene-J4731_09465;Dbxref=NCBI_GP:MBO1929117.1;Name=MBO1929117.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_09465;product=hypothetical protein;protein_id=MBO1929117.1;transl_table=11
JAGETS010000017.1	Genbank	pseudogene	121093	121772	.	-	.	ID=gene-J4731_09470;Name=J4731_09470;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_09470;pseudo=true
JAGETS010000017.1	Protein Homology	CDS	121093	121772	.	-	0	ID=cds-J4731_09470;Parent=gene-J4731_09470;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010846844.1;locus_tag=J4731_09470;product=CidB/LrgB family autolysis modulator;pseudo=true;transl_table=11
JAGETS010000017.1	Genbank	pseudogene	121711	122225	.	-	.	ID=gene-J4731_09475;Name=J4731_09475;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_09475;pseudo=true
JAGETS010000017.1	Protein Homology	CDS	121711	122225	.	-	0	ID=cds-J4731_09475;Parent=gene-J4731_09475;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006660140.1;locus_tag=J4731_09475;product=CidA/LrgA family protein;pseudo=true;transl_table=11
JAGETS010000017.1	Genbank	pseudogene	122369	124372	.	-	.	ID=gene-J4731_09480;Name=metG;gbkey=Gene;gene=metG;gene_biotype=pseudogene;locus_tag=J4731_09480;pseudo=true
JAGETS010000017.1	Protein Homology	CDS	122369	124372	.	-	0	ID=cds-J4731_09480;Parent=gene-J4731_09480;Note=frameshifted%3B internal stop;gbkey=CDS;gene=metG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461099.1;locus_tag=J4731_09480;product=methionine--tRNA ligase;pseudo=true;transl_table=11
JAGETS010000017.1	Genbank	pseudogene	124643	125715	.	+	.	ID=gene-J4731_09485;Name=apbC;gbkey=Gene;gene=apbC;gene_biotype=pseudogene;locus_tag=J4731_09485;pseudo=true
JAGETS010000017.1	Protein Homology	CDS	124643	125715	.	+	0	ID=cds-J4731_09485;Parent=gene-J4731_09485;Note=frameshifted;gbkey=CDS;gene=apbC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004256506.1;locus_tag=J4731_09485;product=iron-sulfur cluster carrier protein ApbC;pseudo=true;transl_table=11
JAGETS010000017.1	Genbank	pseudogene	125801	126419	.	+	.	ID=gene-J4731_09490;Name=J4731_09490;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_09490;pseudo=true
JAGETS010000017.1	Protein Homology	CDS	125801	126419	.	+	0	ID=cds-J4731_09490;Parent=gene-J4731_09490;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006660137.1;locus_tag=J4731_09490;product=LemA family protein;pseudo=true;transl_table=11
JAGETS010000017.1	Genbank	pseudogene	126495	127441	.	+	.	ID=gene-J4731_09495;Name=htpX;gbkey=Gene;gene=htpX;gene_biotype=pseudogene;locus_tag=J4731_09495;pseudo=true
JAGETS010000017.1	Protein Homology	CDS	126495	127441	.	+	0	ID=cds-J4731_09495;Parent=gene-J4731_09495;Note=frameshifted%3B internal stop;gbkey=CDS;gene=htpX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006660136.1;locus_tag=J4731_09495;product=zinc metalloprotease HtpX;pseudo=true;transl_table=11
JAGETS010000017.1	Genbank	pseudogene	127617	128209	.	+	.	ID=gene-J4731_09500;Name=udk;gbkey=Gene;gene=udk;gene_biotype=pseudogene;locus_tag=J4731_09500;pseudo=true
JAGETS010000017.1	Protein Homology	CDS	127617	128209	.	+	0	ID=cds-J4731_09500;Parent=gene-J4731_09500;Note=frameshifted;gbkey=CDS;gene=udk;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461067.1;locus_tag=J4731_09500;product=uridine kinase;pseudo=true;transl_table=11
JAGETS010000017.1	Genbank	pseudogene	128283	128856	.	+	.	ID=gene-J4731_09505;Name=dcd;gbkey=Gene;gene=dcd;gene_biotype=pseudogene;locus_tag=J4731_09505;pseudo=true
JAGETS010000017.1	Protein Homology	CDS	128283	128856	.	+	0	ID=cds-J4731_09505;Parent=gene-J4731_09505;Note=frameshifted;gbkey=CDS;gene=dcd;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004942378.1;locus_tag=J4731_09505;product=dCTP deaminase;pseudo=true;transl_table=11
JAGETS010000017.1	Genbank	pseudogene	128947	130807	.	+	.	ID=gene-J4731_09510;Name=asmA;gbkey=Gene;gene=asmA;gene_biotype=pseudogene;locus_tag=J4731_09510;pseudo=true
JAGETS010000017.1	Protein Homology	CDS	128947	130807	.	+	0	ID=cds-J4731_09510;Parent=gene-J4731_09510;Note=frameshifted;gbkey=CDS;gene=asmA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006812669.1;locus_tag=J4731_09510;product=outer membrane assembly protein AsmA;pseudo=true;transl_table=11
JAGETS010000017.1	Genbank	gene	130854	131012	.	-	.	ID=gene-J4731_09515;Name=J4731_09515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_09515
JAGETS010000017.1	GeneMarkS-2+	CDS	130854	131012	.	-	0	ID=cds-MBO1929118.1;Parent=gene-J4731_09515;Dbxref=NCBI_GP:MBO1929118.1;Name=MBO1929118.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_09515;product=hypothetical protein;protein_id=MBO1929118.1;transl_table=11
JAGETS010000017.1	Genbank	pseudogene	131684	133260	.	-	.	ID=gene-J4731_09520;Name=J4731_09520;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_09520;pseudo=true
JAGETS010000017.1	Protein Homology	CDS	131684	133260	.	-	0	ID=cds-J4731_09520;Parent=gene-J4731_09520;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004200428.1;locus_tag=J4731_09520;product=TerC family protein;pseudo=true;transl_table=11
JAGETS010000017.1	Genbank	pseudogene	133500	134892	.	+	.	ID=gene-J4731_09525;Name=gndA;gbkey=Gene;gene=gndA;gene_biotype=pseudogene;locus_tag=J4731_09525;pseudo=true
JAGETS010000017.1	Protein Homology	CDS	133500	134892	.	+	0	ID=cds-J4731_09525;Parent=gene-J4731_09525;Note=frameshifted%3B internal stop;gbkey=CDS;gene=gndA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416533.1;locus_tag=J4731_09525;product=NADP-dependent phosphogluconate dehydrogenase;pseudo=true;transl_table=11
JAGETS010000017.1	Genbank	pseudogene	135081	136296	.	+	.	ID=gene-J4731_09530;Name=J4731_09530;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_09530;pseudo=true
JAGETS010000017.1	Protein Homology	CDS	135081	136296	.	+	0	ID=cds-J4731_09530;Parent=gene-J4731_09530;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004699092.1;locus_tag=J4731_09530;product=multidrug effflux MFS transporter;pseudo=true;transl_table=11
JAGETS010000017.1	Genbank	gene	136388	137038	.	-	.	ID=gene-J4731_09535;Name=J4731_09535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_09535
JAGETS010000017.1	Protein Homology	CDS	136388	137038	.	-	0	ID=cds-MBO1929119.1;Parent=gene-J4731_09535;Dbxref=NCBI_GP:MBO1929119.1;Name=MBO1929119.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF023975.1;locus_tag=J4731_09535;product=hypothetical protein;protein_id=MBO1929119.1;transl_table=11
JAGETS010000017.1	Genbank	gene	137244	137648	.	-	.	ID=gene-J4731_09540;Name=J4731_09540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_09540
JAGETS010000017.1	Protein Homology	CDS	137244	137648	.	-	0	ID=cds-MBO1929120.1;Parent=gene-J4731_09540;Dbxref=NCBI_GP:MBO1929120.1;Name=MBO1929120.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021945.1;locus_tag=J4731_09540;product=hypothetical protein;protein_id=MBO1929120.1;transl_table=11
JAGETS010000017.1	Genbank	gene	137727	137921	.	-	.	ID=gene-J4731_09545;Name=J4731_09545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_09545
JAGETS010000017.1	Protein Homology	CDS	137727	137921	.	-	0	ID=cds-MBO1929121.1;Parent=gene-J4731_09545;Dbxref=NCBI_GP:MBO1929121.1;Name=MBO1929121.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021945.1;locus_tag=J4731_09545;product=hypothetical protein;protein_id=MBO1929121.1;transl_table=11
JAGETS010000017.1	Genbank	gene	138437	138622	.	-	.	ID=gene-J4731_09550;Name=J4731_09550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_09550
JAGETS010000017.1	GeneMarkS-2+	CDS	138437	138622	.	-	0	ID=cds-MBO1929122.1;Parent=gene-J4731_09550;Dbxref=NCBI_GP:MBO1929122.1;Name=MBO1929122.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_09550;product=hypothetical protein;protein_id=MBO1929122.1;transl_table=11
JAGETS010000017.1	Genbank	pseudogene	139753	140383	.	+	.	ID=gene-J4731_09555;Name=J4731_09555;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_09555;pseudo=true
JAGETS010000017.1	Protein Homology	CDS	139753	140383	.	+	0	ID=cds-J4731_09555;Parent=gene-J4731_09555;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004917999.1;locus_tag=J4731_09555;product=CatB-related O-acetyltransferase;pseudo=true;transl_table=11
JAGETS010000017.1	Genbank	pseudogene	140440	140955	.	-	.	ID=gene-J4731_09560;Name=J4731_09560;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_09560;pseudo=true
JAGETS010000017.1	Protein Homology	CDS	140440	140955	.	-	0	ID=cds-J4731_09560;Parent=gene-J4731_09560;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000138043.1;locus_tag=J4731_09560;product=YbaK/prolyl-tRNA synthetase associated domain-containing protein;pseudo=true;transl_table=11
JAGETS010000017.1	Genbank	pseudogene	141257	143365	.	+	.	ID=gene-J4731_09565;Name=J4731_09565;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_09565;pseudo=true
JAGETS010000017.1	Protein Homology	CDS	141257	143365	.	+	0	ID=cds-J4731_09565;Parent=gene-J4731_09565;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004256468.1;locus_tag=J4731_09565;product=TonB-dependent siderophore receptor;pseudo=true;transl_table=11
JAGETS010000017.1	Genbank	pseudogene	143475	144450	.	+	.	ID=gene-J4731_09570;Name=J4731_09570;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_09570;pseudo=true
JAGETS010000017.1	Protein Homology	CDS	143475	144450	.	+	0	ID=cds-J4731_09570;Parent=gene-J4731_09570;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004239301.1;locus_tag=J4731_09570;product=ABC transporter substrate-binding protein;pseudo=true;transl_table=11
JAGETS010000017.1	Genbank	pseudogene	144485	145094	.	-	.	ID=gene-J4731_09575;Name=J4731_09575;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_09575;pseudo=true
JAGETS010000017.1	Protein Homology	CDS	144485	145094	.	-	0	ID=cds-J4731_09575;Parent=gene-J4731_09575;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211889.1;locus_tag=J4731_09575;product=bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE;pseudo=true;transl_table=11
JAGETS010000017.1	Genbank	pseudogene	145088	145808	.	-	.	ID=gene-J4731_09580;Name=hisF;gbkey=Gene;gene=hisF;gene_biotype=pseudogene;locus_tag=J4731_09580;pseudo=true
JAGETS010000017.1	Protein Homology	CDS	145088	145808	.	-	0	ID=cds-J4731_09580;Parent=gene-J4731_09580;Note=frameshifted;gbkey=CDS;gene=hisF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004388781.1;locus_tag=J4731_09580;product=imidazole glycerol phosphate synthase subunit HisF;pseudo=true;transl_table=11
JAGETS010000017.1	Genbank	pseudogene	145837	146569	.	-	.	ID=gene-J4731_09585;Name=hisA;gbkey=Gene;gene=hisA;gene_biotype=pseudogene;locus_tag=J4731_09585;pseudo=true
JAGETS010000017.1	Protein Homology	CDS	145837	146569	.	-	0	ID=cds-J4731_09585;Parent=gene-J4731_09585;Note=frameshifted;gbkey=CDS;gene=hisA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014657815.1;locus_tag=J4731_09585;product=1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase;pseudo=true;transl_table=11
JAGETS010000017.1	Genbank	pseudogene	146582	147160	.	-	.	ID=gene-J4731_09590;Name=hisH;gbkey=Gene;gene=hisH;gene_biotype=pseudogene;locus_tag=J4731_09590;pseudo=true
JAGETS010000017.1	Protein Homology	CDS	146582	147160	.	-	0	ID=cds-J4731_09590;Parent=gene-J4731_09590;Note=frameshifted;gbkey=CDS;gene=hisH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002224715.1;locus_tag=J4731_09590;product=imidazole glycerol phosphate synthase subunit HisH;pseudo=true;transl_table=11
JAGETS010000017.1	Genbank	pseudogene	147160	148219	.	-	.	ID=gene-J4731_09595;Name=hisB;gbkey=Gene;gene=hisB;gene_biotype=pseudogene;locus_tag=J4731_09595;pseudo=true
JAGETS010000017.1	Protein Homology	CDS	147160	148219	.	-	0	ID=cds-J4731_09595;Parent=gene-J4731_09595;Note=frameshifted;gbkey=CDS;gene=hisB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461019.1;locus_tag=J4731_09595;product=bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB;pseudo=true;transl_table=11
JAGETS010000017.1	Genbank	pseudogene	148233	149297	.	-	.	ID=gene-J4731_09600;Name=hisC;gbkey=Gene;gene=hisC;gene_biotype=pseudogene;locus_tag=J4731_09600;pseudo=true
JAGETS010000017.1	Protein Homology	CDS	148233	149297	.	-	0	ID=cds-J4731_09600;Parent=gene-J4731_09600;Note=frameshifted%3B internal stop;gbkey=CDS;gene=hisC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006812655.1;locus_tag=J4731_09600;product=histidinol-phosphate transaminase;pseudo=true;transl_table=11
JAGETS010000017.1	Genbank	pseudogene	149281	150603	.	-	.	ID=gene-J4731_09605;Name=hisD;gbkey=Gene;gene=hisD;gene_biotype=pseudogene;locus_tag=J4731_09605;pseudo=true
JAGETS010000017.1	Protein Homology	CDS	149281	150603	.	-	0	ID=cds-J4731_09605;Parent=gene-J4731_09605;Note=internal stop;gbkey=CDS;gene=hisD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013575086.1;locus_tag=J4731_09605;product=histidinol dehydrogenase;pseudo=true;transl_table=11
JAGETS010000017.1	Genbank	pseudogene	150618	151503	.	-	.	ID=gene-J4731_09610;Name=hisG;gbkey=Gene;gene=hisG;gene_biotype=pseudogene;locus_tag=J4731_09610;pseudo=true
JAGETS010000017.1	Protein Homology	CDS	150618	151503	.	-	0	ID=cds-J4731_09610;Parent=gene-J4731_09610;Note=frameshifted;gbkey=CDS;gene=hisG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005128078.1;locus_tag=J4731_09610;product=ATP phosphoribosyltransferase;pseudo=true;transl_table=11
JAGETS010000017.1	cmsearch	sequence_feature	151554	151681	.	-	.	ID=id-JAGETS010000017.1:151554..151681;Dbxref=RFAM:RF00514;Note=His leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.1
JAGETS010000017.1	Genbank	pseudogene	151932	152771	.	+	.	ID=gene-J4731_09615;Name=J4731_09615;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_09615;pseudo=true
JAGETS010000017.1	Protein Homology	CDS	151932	152771	.	+	0	ID=cds-J4731_09615;Parent=gene-J4731_09615;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004256449.1;locus_tag=J4731_09615;product=SDR family oxidoreductase;pseudo=true;transl_table=11
JAGETS010000017.1	Genbank	pseudogene	152772	153393	.	-	.	ID=gene-J4731_09620;Name=J4731_09620;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_09620;pseudo=true
JAGETS010000017.1	Protein Homology	CDS	152772	153393	.	-	0	ID=cds-J4731_09620;Parent=gene-J4731_09620;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006657686.1;locus_tag=J4731_09620;product=glutathione S-transferase family protein;pseudo=true;transl_table=11
JAGETS010000017.1	Genbank	pseudogene	153745	154808	.	+	.	ID=gene-J4731_09625;Name=J4731_09625;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_09625;pseudo=true
JAGETS010000017.1	Protein Homology	CDS	153745	154808	.	+	0	ID=cds-J4731_09625;Parent=gene-J4731_09625;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004965160.1;locus_tag=J4731_09625;product=serine hydrolase;pseudo=true;transl_table=11
JAGETS010000017.1	Genbank	pseudogene	154914	156240	.	-	.	ID=gene-J4731_09630;Name=J4731_09630;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_09630;pseudo=true
JAGETS010000017.1	Protein Homology	CDS	154914	156240	.	-	0	ID=cds-J4731_09630;Parent=gene-J4731_09630;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417277.1;locus_tag=J4731_09630;product=L-serine ammonia-lyase;pseudo=true;transl_table=11
JAGETS010000017.1	Genbank	pseudogene	156315	157600	.	-	.	ID=gene-J4731_09635;Name=J4731_09635;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_09635;pseudo=true
JAGETS010000017.1	Protein Homology	CDS	156315	157600	.	-	0	ID=cds-J4731_09635;Parent=gene-J4731_09635;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015963224.1;locus_tag=J4731_09635;product=HAAAP family serine/threonine permease;pseudo=true;transl_table=11
JAGETS010000017.1	Genbank	pseudogene	158464	159070	.	-	.	ID=gene-J4731_09640;Name=ybjG;gbkey=Gene;gene=ybjG;gene_biotype=pseudogene;locus_tag=J4731_09640;pseudo=true
JAGETS010000017.1	Protein Homology	CDS	158464	159070	.	-	0	ID=cds-J4731_09640;Parent=gene-J4731_09640;Note=frameshifted;gbkey=CDS;gene=ybjG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006662251.1;locus_tag=J4731_09640;product=undecaprenyl-diphosphate phosphatase;pseudo=true;transl_table=11
JAGETS010000017.1	Genbank	pseudogene	159268	159694	.	+	.	ID=gene-J4731_09645;Name=J4731_09645;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_09645;pseudo=true
JAGETS010000017.1	Protein Homology	CDS	159268	159694	.	+	0	ID=cds-J4731_09645;Parent=gene-J4731_09645;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004256427.1;locus_tag=J4731_09645;product=YjbQ family protein;pseudo=true;transl_table=11
JAGETS010000017.1	Genbank	gene	159948	160127	.	-	.	ID=gene-J4731_09650;Name=J4731_09650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_09650
JAGETS010000017.1	Protein Homology	CDS	159948	160127	.	-	0	ID=cds-MBO1929123.1;Parent=gene-J4731_09650;Dbxref=NCBI_GP:MBO1929123.1;Name=MBO1929123.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004244541.1;locus_tag=J4731_09650;product=GrxA family glutaredoxin;protein_id=MBO1929123.1;transl_table=11
JAGETS010000017.1	Genbank	pseudogene	160353	160678	.	+	.	ID=gene-J4731_09655;Name=J4731_09655;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_09655;pseudo=true
JAGETS010000017.1	Protein Homology	CDS	160353	160678	.	+	0	ID=cds-J4731_09655;Parent=gene-J4731_09655;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004256421.1;locus_tag=J4731_09655;product=YbjC family protein;pseudo=true;transl_table=11
JAGETS010000017.1	Genbank	pseudogene	160815	161329	.	+	.	ID=gene-J4731_09660;Name=J4731_09660;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_09660;pseudo=true
JAGETS010000017.1	Protein Homology	CDS	160815	161329	.	+	0	ID=cds-J4731_09660;Parent=gene-J4731_09660;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013575815.1;locus_tag=J4731_09660;product=YbjN domain-containing protein;pseudo=true;transl_table=11
JAGETS010000017.1	Genbank	pseudogene	161410	162463	.	+	.	ID=gene-J4731_09665;Name=rlmC;gbkey=Gene;gene=rlmC;gene_biotype=pseudogene;locus_tag=J4731_09665;pseudo=true
JAGETS010000017.1	Protein Homology	CDS	161410	162463	.	+	0	ID=cds-J4731_09665;Parent=gene-J4731_09665;Note=frameshifted;gbkey=CDS;gene=rlmC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004389592.1;locus_tag=J4731_09665;product=23S rRNA (uracil(747)-C(5))-methyltransferase RlmC;pseudo=true;transl_table=11
JAGETS010000017.1	Genbank	pseudogene	162514	163152	.	-	.	ID=gene-J4731_09670;Name=artM;gbkey=Gene;gene=artM;gene_biotype=pseudogene;locus_tag=J4731_09670;pseudo=true
JAGETS010000017.1	Protein Homology	CDS	162514	163152	.	-	0	ID=cds-J4731_09670;Parent=gene-J4731_09670;Note=frameshifted;gbkey=CDS;gene=artM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015834989.1;locus_tag=J4731_09670;product=arginine ABC transporter permease ArtM;pseudo=true;transl_table=11
JAGETS010000017.1	Genbank	pseudogene	163174	163906	.	-	.	ID=gene-J4731_09675;Name=artQ;gbkey=Gene;gene=artQ;gene_biotype=pseudogene;locus_tag=J4731_09675;pseudo=true
JAGETS010000017.1	Protein Homology	CDS	163174	163906	.	-	0	ID=cds-J4731_09675;Parent=gene-J4731_09675;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;gene=artQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004918050.1;locus_tag=J4731_09675;product=arginine ABC transporter permease ArtQ;pseudo=true;transl_table=11
JAGETS010000017.1	Genbank	pseudogene	163915	164654	.	-	.	ID=gene-J4731_09680;Name=J4731_09680;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_09680;pseudo=true
JAGETS010000017.1	Protein Homology	CDS	163915	164654	.	-	0	ID=cds-J4731_09680;Parent=gene-J4731_09680;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006812635.1;locus_tag=J4731_09680;product=transporter substrate-binding domain-containing protein;pseudo=true;transl_table=11
JAGETS010000017.1	Genbank	pseudogene	164673	165387	.	-	.	ID=gene-J4731_09685;Name=artP;gbkey=Gene;gene=artP;gene_biotype=pseudogene;locus_tag=J4731_09685;pseudo=true
JAGETS010000017.1	Protein Homology	CDS	164673	165387	.	-	0	ID=cds-J4731_09685;Parent=gene-J4731_09685;Note=frameshifted;gbkey=CDS;gene=artP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006812634.1;locus_tag=J4731_09685;product=arginine ABC transporter ATP-binding protein ArtP;pseudo=true;transl_table=11
JAGETS010000017.1	Genbank	pseudogene	165497	166778	.	-	.	ID=gene-J4731_09690;Name=J4731_09690;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_09690;pseudo=true
JAGETS010000017.1	Protein Homology	CDS	165497	166778	.	-	0	ID=cds-J4731_09690;Parent=gene-J4731_09690;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004699944.1;locus_tag=J4731_09690;product=DUF2867 domain-containing protein;pseudo=true;transl_table=11
JAGETS010000017.1	Genbank	pseudogene	167023	167919	.	-	.	ID=gene-J4731_09695;Name=J4731_09695;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_09695;pseudo=true
JAGETS010000017.1	Protein Homology	CDS	167023	167919	.	-	0	ID=cds-J4731_09695;Parent=gene-J4731_09695;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000491142.1;locus_tag=J4731_09695;product=lysine exporter LysO family protein;pseudo=true;transl_table=11
JAGETS010000017.1	Genbank	pseudogene	168317	169939	.	+	.	ID=gene-J4731_09700;Name=J4731_09700;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_09700;pseudo=true
JAGETS010000017.1	Protein Homology	CDS	168317	169939	.	+	0	ID=cds-J4731_09700;Parent=gene-J4731_09700;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011171807.1;locus_tag=J4731_09700;product=ATP-dependent endonuclease;pseudo=true;transl_table=11
JAGETS010000017.1	Genbank	pseudogene	170292	171236	.	+	.	ID=gene-J4731_09705;Name=macA;gbkey=Gene;gene=macA;gene_biotype=pseudogene;locus_tag=J4731_09705;pseudo=true
JAGETS010000017.1	Protein Homology	CDS	170292	171236	.	+	0	ID=cds-J4731_09705;Parent=gene-J4731_09705;Note=frameshifted;gbkey=CDS;gene=macA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133052.1;locus_tag=J4731_09705;product=macrolide transporter subunit MacA;pseudo=true;transl_table=11
JAGETS010000017.1	Genbank	pseudogene	171239	173162	.	+	.	ID=gene-J4731_09710;Name=macB;gbkey=Gene;gene=macB;gene_biotype=pseudogene;locus_tag=J4731_09710;pseudo=true
JAGETS010000017.1	Protein Homology	CDS	171239	173162	.	+	0	ID=cds-J4731_09710;Parent=gene-J4731_09710;Note=frameshifted%3B internal stop;gbkey=CDS;gene=macB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008911936.1;locus_tag=J4731_09710;product=macrolide ABC transporter ATP-binding protein/permease MacB;pseudo=true;transl_table=11
JAGETS010000017.1	Genbank	gene	173369	174286	.	-	.	ID=gene-J4731_09715;Name=J4731_09715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_09715
JAGETS010000017.1	Protein Homology	CDS	173369	174286	.	-	0	ID=cds-MBO1929124.1;Parent=gene-J4731_09715;Dbxref=NCBI_GP:MBO1929124.1;Name=MBO1929124.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015727.1;locus_tag=J4731_09715;product=mannonate dehydratase;protein_id=MBO1929124.1;transl_table=11
JAGETS010000017.1	Genbank	pseudogene	174316	175566	.	-	.	ID=gene-J4731_09720;Name=J4731_09720;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_09720;pseudo=true
JAGETS010000017.1	Protein Homology	CDS	174316	175566	.	-	0	ID=cds-J4731_09720;Parent=gene-J4731_09720;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004256389.1;locus_tag=J4731_09720;product=MFS transporter;pseudo=true;transl_table=11
JAGETS010000017.1	Genbank	pseudogene	175634	176305	.	-	.	ID=gene-J4731_09725;Name=J4731_09725;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_09725;pseudo=true
JAGETS010000017.1	Protein Homology	CDS	175634	176305	.	-	0	ID=cds-J4731_09725;Parent=gene-J4731_09725;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004256386.1;locus_tag=J4731_09725;product=RraA family protein;pseudo=true;transl_table=11
JAGETS010000017.1	Genbank	gene	176765	176917	.	+	.	ID=gene-J4731_09730;Name=J4731_09730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_09730
JAGETS010000017.1	GeneMarkS-2+	CDS	176765	176917	.	+	0	ID=cds-MBO1929125.1;Parent=gene-J4731_09730;Dbxref=NCBI_GP:MBO1929125.1;Name=MBO1929125.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_09730;product=hypothetical protein;protein_id=MBO1929125.1;transl_table=11
JAGETS010000017.1	Genbank	pseudogene	177615	178953	.	+	.	ID=gene-J4731_09735;Name=J4731_09735;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_09735;pseudo=true
JAGETS010000017.1	Protein Homology	CDS	177615	178953	.	+	0	ID=cds-J4731_09735;Parent=gene-J4731_09735;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006812626.1;locus_tag=J4731_09735;product=cytosine permease;pseudo=true;transl_table=11
JAGETS010000017.1	Genbank	pseudogene	178956	179794	.	+	.	ID=gene-J4731_09740;Name=J4731_09740;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_09740;pseudo=true
JAGETS010000017.1	Protein Homology	CDS	178956	179794	.	+	0	ID=cds-J4731_09740;Parent=gene-J4731_09740;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004256366.1;locus_tag=J4731_09740;product=hydrolase;pseudo=true;transl_table=11
JAGETS010000017.1	Genbank	pseudogene	179791	180526	.	+	.	ID=gene-J4731_09745;Name=J4731_09745;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_09745;pseudo=true
JAGETS010000017.1	Protein Homology	CDS	179791	180526	.	+	0	ID=cds-J4731_09745;Parent=gene-J4731_09745;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006812624.1;locus_tag=J4731_09745;product=IclR family transcriptional regulator;pseudo=true;transl_table=11
JAGETS010000017.1	Genbank	pseudogene	180789	181733	.	+	.	ID=gene-J4731_09750;Name=J4731_09750;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_09750;pseudo=true
JAGETS010000017.1	Protein Homology	CDS	180789	181733	.	+	0	ID=cds-J4731_09750;Parent=gene-J4731_09750;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009091804.1;locus_tag=J4731_09750;product=DUF1177 domain-containing protein;pseudo=true;transl_table=11
JAGETS010000017.1	Genbank	gene	181807	182055	.	-	.	ID=gene-J4731_09755;Name=cspD;gbkey=Gene;gene=cspD;gene_biotype=protein_coding;locus_tag=J4731_09755
JAGETS010000017.1	Protein Homology	CDS	181807	182055	.	-	0	ID=cds-MBO1929126.1;Parent=gene-J4731_09755;Dbxref=NCBI_GP:MBO1929126.1;Name=MBO1929126.1;gbkey=CDS;gene=cspD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004256359.1;locus_tag=J4731_09755;product=cold shock domain-containing protein CspD;protein_id=MBO1929126.1;transl_table=11
JAGETS010000017.1	Genbank	gene	182449	182766	.	+	.	ID=gene-J4731_09760;Name=J4731_09760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_09760
JAGETS010000017.1	Protein Homology	CDS	182449	182766	.	+	0	ID=cds-MBO1929127.1;Parent=gene-J4731_09760;Dbxref=NCBI_GP:MBO1929127.1;Name=MBO1929127.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014655.1;locus_tag=J4731_09760;product=ATP-dependent Clp protease adaptor ClpS;protein_id=MBO1929127.1;transl_table=11
JAGETS010000017.1	Genbank	pseudogene	182798	184973	.	+	.	ID=gene-J4731_09765;Name=J4731_09765;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_09765;pseudo=true
JAGETS010000017.1	Protein Homology	CDS	182798	184973	.	+	0	ID=cds-J4731_09765;Parent=gene-J4731_09765;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012987461.1;locus_tag=J4731_09765;product=AAA family ATPase;pseudo=true;transl_table=11
JAGETS010000017.1	Genbank	pseudogene	185085	185280	.	-	.	ID=gene-J4731_09770;Name=infA;gbkey=Gene;gene=infA;gene_biotype=pseudogene;locus_tag=J4731_09770;pseudo=true
JAGETS010000017.1	Protein Homology	CDS	185085	185280	.	-	0	ID=cds-J4731_09770;Parent=gene-J4731_09770;Note=frameshifted;gbkey=CDS;gene=infA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001040186.1;locus_tag=J4731_09770;product=translation initiation factor IF-1;pseudo=true;transl_table=11
JAGETS010000017.1	Genbank	pseudogene	185439	186113	.	-	.	ID=gene-J4731_09775;Name=aat;gbkey=Gene;gene=aat;gene_biotype=pseudogene;locus_tag=J4731_09775;pseudo=true
JAGETS010000017.1	Protein Homology	CDS	185439	186113	.	-	0	ID=cds-J4731_09775;Parent=gene-J4731_09775;Note=frameshifted%3B internal stop;gbkey=CDS;gene=aat;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006657776.1;locus_tag=J4731_09775;product=leucyl/phenylalanyl-tRNA--protein transferase;pseudo=true;transl_table=11
JAGETS010000017.1	Genbank	pseudogene	186121	186939	.	-	.	ID=gene-J4731_09780;Name=J4731_09780;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_09780;pseudo=true
JAGETS010000017.1	Protein Homology	CDS	186121	186939	.	-	1	ID=cds-J4731_09780;Parent=gene-J4731_09780;Note=frameshifted%3B internal stop%3B incomplete%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014657831.1;locus_tag=J4731_09780;product=ATP-binding cassette domain-containing protein;pseudo=true;transl_table=11
##sequence-region JAGETS010000018.1 1 129280
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=587
JAGETS010000018.1	Genbank	region	1	129280	.	+	.	ID=JAGETS010000018.1:1..129280;Dbxref=taxon:587;collected-by=NHLS;collection-date=2018;country=South Africa: Pretoria;gbkey=Src;isolation-source=stool;lat-lon=25.7479 S 28.2293 E;mol_type=genomic DNA;nat-host=porcine;strain=SG003
JAGETS010000018.1	Genbank	gene	543	899	.	+	.	ID=gene-J4731_09785;Name=J4731_09785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_09785
JAGETS010000018.1	GeneMarkS-2+	CDS	543	899	.	+	0	ID=cds-MBO1929128.1;Parent=gene-J4731_09785;Dbxref=NCBI_GP:MBO1929128.1;Name=MBO1929128.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_09785;product=hypothetical protein;protein_id=MBO1929128.1;transl_table=11
JAGETS010000018.1	Genbank	pseudogene	1474	3017	.	+	.	ID=gene-J4731_09790;Name=sapA;gbkey=Gene;gene=sapA;gene_biotype=pseudogene;locus_tag=J4731_09790;pseudo=true
JAGETS010000018.1	Protein Homology	CDS	1474	3017	.	+	0	ID=cds-J4731_09790;Parent=gene-J4731_09790;Note=frameshifted;gbkey=CDS;gene=sapA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017799959.1;locus_tag=J4731_09790;product=peptide ABC transporter substrate-binding protein SapA;pseudo=true;transl_table=11
JAGETS010000018.1	Genbank	pseudogene	3058	3974	.	+	.	ID=gene-J4731_09795;Name=sapB;gbkey=Gene;gene=sapB;gene_biotype=pseudogene;locus_tag=J4731_09795;pseudo=true
JAGETS010000018.1	Protein Homology	CDS	3058	3974	.	+	0	ID=cds-J4731_09795;Parent=gene-J4731_09795;Note=frameshifted;gbkey=CDS;gene=sapB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004717574.1;locus_tag=J4731_09795;product=putrescine ABC transporter permease SapB;pseudo=true;transl_table=11
JAGETS010000018.1	Genbank	pseudogene	3992	4846	.	+	.	ID=gene-J4731_09800;Name=sapC;gbkey=Gene;gene=sapC;gene_biotype=pseudogene;locus_tag=J4731_09800;pseudo=true
JAGETS010000018.1	Protein Homology	CDS	3992	4846	.	+	0	ID=cds-J4731_09800;Parent=gene-J4731_09800;Note=frameshifted;gbkey=CDS;gene=sapC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001146150.1;locus_tag=J4731_09800;product=peptide ABC transporter permease SapC;pseudo=true;transl_table=11
JAGETS010000018.1	Genbank	pseudogene	4846	5838	.	+	.	ID=gene-J4731_09805;Name=sapD;gbkey=Gene;gene=sapD;gene_biotype=pseudogene;locus_tag=J4731_09805;pseudo=true
JAGETS010000018.1	Protein Homology	CDS	4846	5838	.	+	0	ID=cds-J4731_09805;Parent=gene-J4731_09805;Note=frameshifted;gbkey=CDS;gene=sapD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004263866.1;locus_tag=J4731_09805;product=peptide ABC transporter ATP-binding protein SapD;pseudo=true;transl_table=11
JAGETS010000018.1	Genbank	pseudogene	5839	6641	.	+	.	ID=gene-J4731_09810;Name=sapF;gbkey=Gene;gene=sapF;gene_biotype=pseudogene;locus_tag=J4731_09810;pseudo=true
JAGETS010000018.1	Protein Homology	CDS	5839	6641	.	+	0	ID=cds-J4731_09810;Parent=gene-J4731_09810;Note=frameshifted;gbkey=CDS;gene=sapF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004263864.1;locus_tag=J4731_09810;product=peptide ABC transporter ATP-binding protein SapF;pseudo=true;transl_table=11
JAGETS010000018.1	Genbank	pseudogene	6699	7502	.	-	.	ID=gene-J4731_09815;Name=J4731_09815;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_09815;pseudo=true
JAGETS010000018.1	Protein Homology	CDS	6699	7502	.	-	0	ID=cds-J4731_09815;Parent=gene-J4731_09815;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012367654.1;locus_tag=J4731_09815;product=DUF817 domain-containing protein;pseudo=true;transl_table=11
JAGETS010000018.1	Genbank	pseudogene	7858	8460	.	+	.	ID=gene-J4731_09820;Name=gstA;gbkey=Gene;gene=gstA;gene_biotype=pseudogene;locus_tag=J4731_09820;pseudo=true
JAGETS010000018.1	Protein Homology	CDS	7858	8460	.	+	0	ID=cds-J4731_09820;Parent=gene-J4731_09820;Note=frameshifted;gbkey=CDS;gene=gstA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006537028.1;locus_tag=J4731_09820;product=glutathione transferase GstA;pseudo=true;transl_table=11
JAGETS010000018.1	Genbank	pseudogene	8574	9413	.	-	.	ID=gene-J4731_09825;Name=pdxY;gbkey=Gene;gene=pdxY;gene_biotype=pseudogene;locus_tag=J4731_09825;pseudo=true
JAGETS010000018.1	Protein Homology	CDS	8574	9413	.	-	0	ID=cds-J4731_09825;Parent=gene-J4731_09825;Note=frameshifted;gbkey=CDS;gene=pdxY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003848993.1;locus_tag=J4731_09825;product=pyridoxal kinase PdxY;pseudo=true;transl_table=11
JAGETS010000018.1	Genbank	pseudogene	9650	10879	.	-	.	ID=gene-J4731_09830;Name=tyrS;gbkey=Gene;gene=tyrS;gene_biotype=pseudogene;locus_tag=J4731_09830;pseudo=true
JAGETS010000018.1	Protein Homology	CDS	9650	10879	.	-	0	ID=cds-J4731_09830;Parent=gene-J4731_09830;Note=frameshifted%3B internal stop;gbkey=CDS;gene=tyrS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004919214.1;locus_tag=J4731_09830;product=tyrosine--tRNA ligase;pseudo=true;transl_table=11
JAGETS010000018.1	Genbank	pseudogene	11035	11672	.	-	.	ID=gene-J4731_09835;Name=pdxH;gbkey=Gene;gene=pdxH;gene_biotype=pseudogene;locus_tag=J4731_09835;pseudo=true
JAGETS010000018.1	Protein Homology	CDS	11035	11672	.	-	0	ID=cds-J4731_09835;Parent=gene-J4731_09835;Note=frameshifted;gbkey=CDS;gene=pdxH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009635940.1;locus_tag=J4731_09835;product=pyridoxamine 5'-phosphate oxidase;pseudo=true;transl_table=11
JAGETS010000018.1	Genbank	pseudogene	11712	12802	.	-	.	ID=gene-J4731_09840;Name=anmK;gbkey=Gene;gene=anmK;gene_biotype=pseudogene;locus_tag=J4731_09840;pseudo=true
JAGETS010000018.1	Protein Homology	CDS	11712	12802	.	-	0	ID=cds-J4731_09840;Parent=gene-J4731_09840;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;gene=anmK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004243120.1;locus_tag=J4731_09840;product=anhydro-N-acetylmuramic acid kinase;pseudo=true;transl_table=11
JAGETS010000018.1	Genbank	pseudogene	13294	13797	.	+	.	ID=gene-J4731_09845;Name=J4731_09845;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_09845;pseudo=true
JAGETS010000018.1	Protein Homology	CDS	13294	13797	.	+	0	ID=cds-J4731_09845;Parent=gene-J4731_09845;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006813243.1;locus_tag=J4731_09845;product=glycine zipper 2TM domain-containing protein;pseudo=true;transl_table=11
JAGETS010000018.1	Genbank	pseudogene	14268	14654	.	-	.	ID=gene-J4731_09850;Name=slyA;gbkey=Gene;gene=slyA;gene_biotype=pseudogene;locus_tag=J4731_09850;pseudo=true
JAGETS010000018.1	Protein Homology	CDS	14268	14654	.	-	0	ID=cds-J4731_09850;Parent=gene-J4731_09850;Note=frameshifted;gbkey=CDS;gene=slyA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210955.1;locus_tag=J4731_09850;product=transcriptional regulator SlyA;pseudo=true;transl_table=11
JAGETS010000018.1	Genbank	pseudogene	15179	15413	.	-	.	ID=gene-J4731_09855;Name=J4731_09855;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_09855;pseudo=true
JAGETS010000018.1	Protein Homology	CDS	15179	15413	.	-	0	ID=cds-J4731_09855;Parent=gene-J4731_09855;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004263835.1;locus_tag=J4731_09855;product=DUF1289 domain-containing protein;pseudo=true;transl_table=11
JAGETS010000018.1	Genbank	pseudogene	15579	15985	.	+	.	ID=gene-J4731_09860;Name=gloA;gbkey=Gene;gene=gloA;gene_biotype=pseudogene;locus_tag=J4731_09860;pseudo=true
JAGETS010000018.1	Protein Homology	CDS	15579	15985	.	+	0	ID=cds-J4731_09860;Parent=gene-J4731_09860;Note=frameshifted;gbkey=CDS;gene=gloA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210948.1;locus_tag=J4731_09860;product=lactoylglutathione lyase;pseudo=true;transl_table=11
JAGETS010000018.1	Genbank	gene	16194	16775	.	+	.	ID=gene-J4731_09865;Name=rnt;gbkey=Gene;gene=rnt;gene_biotype=protein_coding;locus_tag=J4731_09865
JAGETS010000018.1	Protein Homology	CDS	16194	16775	.	+	0	ID=cds-MBO1929129.1;Parent=gene-J4731_09865;Dbxref=NCBI_GP:MBO1929129.1;Name=MBO1929129.1;gbkey=CDS;gene=rnt;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012988920.1;locus_tag=J4731_09865;product=ribonuclease T;protein_id=MBO1929129.1;transl_table=11
JAGETS010000018.1	Genbank	pseudogene	16875	17223	.	-	.	ID=gene-J4731_09870;Name=J4731_09870;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_09870;pseudo=true
JAGETS010000018.1	Protein Homology	CDS	16875	17223	.	-	0	ID=cds-J4731_09870;Parent=gene-J4731_09870;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006660076.1;locus_tag=J4731_09870;product=Grx4 family monothiol glutaredoxin;pseudo=true;transl_table=11
JAGETS010000018.1	Genbank	pseudogene	17701	18278	.	+	.	ID=gene-J4731_09875;Name=sodB;gbkey=Gene;gene=sodB;gene_biotype=pseudogene;locus_tag=J4731_09875;pseudo=true
JAGETS010000018.1	Protein Homology	CDS	17701	18278	.	+	0	ID=cds-J4731_09875;Parent=gene-J4731_09875;Note=frameshifted;gbkey=CDS;gene=sodB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020079002.1;locus_tag=J4731_09875;product=superoxide dismutase [Fe];pseudo=true;transl_table=11
JAGETS010000018.1	Genbank	pseudogene	18714	19730	.	+	.	ID=gene-J4731_09880;Name=purR;gbkey=Gene;gene=purR;gene_biotype=pseudogene;locus_tag=J4731_09880;pseudo=true
JAGETS010000018.1	Protein Homology	CDS	18714	19730	.	+	0	ID=cds-J4731_09880;Parent=gene-J4731_09880;Note=frameshifted;gbkey=CDS;gene=purR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005127190.1;locus_tag=J4731_09880;product=HTH-type transcriptional repressor PurR;pseudo=true;transl_table=11
JAGETS010000018.1	Genbank	pseudogene	19740	20634	.	-	.	ID=gene-J4731_09885;Name=J4731_09885;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_09885;pseudo=true
JAGETS010000018.1	Protein Homology	CDS	19740	20634	.	-	0	ID=cds-J4731_09885;Parent=gene-J4731_09885;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015697796.1;locus_tag=J4731_09885;product=LysR family transcriptional regulator;pseudo=true;transl_table=11
JAGETS010000018.1	Genbank	pseudogene	20714	21868	.	+	.	ID=gene-J4731_09890;Name=J4731_09890;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_09890;pseudo=true
JAGETS010000018.1	Protein Homology	CDS	20714	21868	.	+	0	ID=cds-J4731_09890;Parent=gene-J4731_09890;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015672172.1;locus_tag=J4731_09890;product=Bcr/CflA family multidrug efflux MFS transporter;pseudo=true;transl_table=11
JAGETS010000018.1	Genbank	pseudogene	22280	23026	.	+	.	ID=gene-J4731_09895;Name=J4731_09895;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_09895;pseudo=true
JAGETS010000018.1	Protein Homology	CDS	22280	23026	.	+	0	ID=cds-J4731_09895;Parent=gene-J4731_09895;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006660081.1;locus_tag=J4731_09895;product=helix-turn-helix transcriptional regulator;pseudo=true;transl_table=11
JAGETS010000018.1	Genbank	pseudogene	23058	23311	.	+	.	ID=gene-J4731_09900;Name=J4731_09900;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_09900;pseudo=true
JAGETS010000018.1	Protein Homology	CDS	23058	23311	.	+	0	ID=cds-J4731_09900;Parent=gene-J4731_09900;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006660082.1;locus_tag=J4731_09900;product=antibiotic biosynthesis monooxygenase;pseudo=true;transl_table=11
JAGETS010000018.1	Genbank	pseudogene	23606	24182	.	-	.	ID=gene-J4731_09905;Name=J4731_09905;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_09905;pseudo=true
JAGETS010000018.1	Protein Homology	CDS	23606	24182	.	-	0	ID=cds-J4731_09905;Parent=gene-J4731_09905;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012144921.1;locus_tag=J4731_09905;product=riboflavin synthase subunit alpha;pseudo=true;transl_table=11
JAGETS010000018.1	Genbank	pseudogene	24456	25815	.	+	.	ID=gene-J4731_09910;Name=J4731_09910;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_09910;pseudo=true
JAGETS010000018.1	Protein Homology	CDS	24456	25815	.	+	0	ID=cds-J4731_09910;Parent=gene-J4731_09910;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001175077.1;locus_tag=J4731_09910;product=MATE family efflux transporter;pseudo=true;transl_table=11
JAGETS010000018.1	Genbank	gene	25973	26048	.	+	.	ID=gene-J4731_09915;Name=J4731_09915;gbkey=Gene;gene_biotype=tRNA;locus_tag=J4731_09915
JAGETS010000018.1	tRNAscan-SE	tRNA	25973	26048	.	+	.	ID=rna-J4731_09915;Parent=gene-J4731_09915;anticodon=(pos:26007..26009);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=J4731_09915;product=tRNA-Val
JAGETS010000018.1	tRNAscan-SE	exon	25973	26048	.	+	.	ID=exon-J4731_09915-1;Parent=rna-J4731_09915;anticodon=(pos:26007..26009);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=J4731_09915;product=tRNA-Val
JAGETS010000018.1	Genbank	gene	26079	26154	.	+	.	ID=gene-J4731_09920;Name=J4731_09920;gbkey=Gene;gene_biotype=tRNA;locus_tag=J4731_09920
JAGETS010000018.1	tRNAscan-SE	tRNA	26079	26154	.	+	.	ID=rna-J4731_09920;Parent=gene-J4731_09920;gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=J4731_09920;product=tRNA-OTHER
JAGETS010000018.1	tRNAscan-SE	exon	26079	26154	.	+	.	ID=exon-J4731_09920-1;Parent=rna-J4731_09920;gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=J4731_09920;product=tRNA-OTHER
JAGETS010000018.1	Genbank	gene	26185	26260	.	+	.	ID=gene-J4731_09925;Name=J4731_09925;gbkey=Gene;gene_biotype=tRNA;locus_tag=J4731_09925
JAGETS010000018.1	tRNAscan-SE	tRNA	26185	26260	.	+	.	ID=rna-J4731_09925;Parent=gene-J4731_09925;anticodon=(pos:26219..26221);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=J4731_09925;product=tRNA-Val
JAGETS010000018.1	tRNAscan-SE	exon	26185	26260	.	+	.	ID=exon-J4731_09925-1;Parent=rna-J4731_09925;anticodon=(pos:26219..26221);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=J4731_09925;product=tRNA-Val
JAGETS010000018.1	Genbank	pseudogene	26678	28066	.	+	.	ID=gene-J4731_09930;Name=pykF;gbkey=Gene;gene=pykF;gene_biotype=pseudogene;locus_tag=J4731_09930;pseudo=true
JAGETS010000018.1	Protein Homology	CDS	26678	28066	.	+	0	ID=cds-J4731_09930;Parent=gene-J4731_09930;Note=frameshifted%3B internal stop;gbkey=CDS;gene=pykF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010346010.1;locus_tag=J4731_09930;product=pyruvate kinase PykF;pseudo=true;transl_table=11
JAGETS010000018.1	Genbank	pseudogene	28811	29864	.	-	.	ID=gene-J4731_09935;Name=J4731_09935;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_09935;pseudo=true
JAGETS010000018.1	Protein Homology	CDS	28811	29864	.	-	0	ID=cds-J4731_09935;Parent=gene-J4731_09935;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004263785.1;locus_tag=J4731_09935;product=L%2CD-transpeptidase family protein;pseudo=true;transl_table=11
JAGETS010000018.1	Genbank	pseudogene	30116	30495	.	-	.	ID=gene-J4731_09940;Name=sufE;gbkey=Gene;gene=sufE;gene_biotype=pseudogene;locus_tag=J4731_09940;pseudo=true
JAGETS010000018.1	Protein Homology	CDS	30116	30495	.	-	0	ID=cds-J4731_09940;Parent=gene-J4731_09940;Note=frameshifted;gbkey=CDS;gene=sufE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019079319.1;locus_tag=J4731_09940;product=cysteine desulfuration protein SufE;pseudo=true;transl_table=11
JAGETS010000018.1	Genbank	pseudogene	30534	31758	.	-	.	ID=gene-J4731_09945;Name=sufS;gbkey=Gene;gene=sufS;gene_biotype=pseudogene;locus_tag=J4731_09945;pseudo=true
JAGETS010000018.1	Protein Homology	CDS	30534	31758	.	-	0	ID=cds-J4731_09945;Parent=gene-J4731_09945;Note=frameshifted%3B internal stop;gbkey=CDS;gene=sufS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014887995.1;locus_tag=J4731_09945;product=cysteine desulfurase SufS;pseudo=true;transl_table=11
JAGETS010000018.1	Genbank	pseudogene	31763	33053	.	-	.	ID=gene-J4731_09950;Name=sufD;gbkey=Gene;gene=sufD;gene_biotype=pseudogene;locus_tag=J4731_09950;pseudo=true
JAGETS010000018.1	Protein Homology	CDS	31763	33053	.	-	0	ID=cds-J4731_09950;Parent=gene-J4731_09950;Note=frameshifted%3B internal stop;gbkey=CDS;gene=sufD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008911478.1;locus_tag=J4731_09950;product=Fe-S cluster assembly protein SufD;pseudo=true;transl_table=11
JAGETS010000018.1	Genbank	pseudogene	33028	33752	.	-	.	ID=gene-J4731_09955;Name=sufC;gbkey=Gene;gene=sufC;gene_biotype=pseudogene;locus_tag=J4731_09955;pseudo=true
JAGETS010000018.1	Protein Homology	CDS	33028	33752	.	-	0	ID=cds-J4731_09955;Parent=gene-J4731_09955;Note=frameshifted%3B internal stop;gbkey=CDS;gene=sufC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008500629.1;locus_tag=J4731_09955;product=Fe-S cluster assembly ATPase SufC;pseudo=true;transl_table=11
JAGETS010000018.1	Genbank	gene	33889	34266	.	-	.	ID=gene-J4731_09960;Name=J4731_09960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_09960
JAGETS010000018.1	Protein Homology	CDS	33889	34266	.	-	0	ID=cds-MBO1929130.1;Parent=gene-J4731_09960;Dbxref=NCBI_GP:MBO1929130.1;Name=MBO1929130.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013614.1;locus_tag=J4731_09960;product=SufD family Fe-S cluster assembly protein;protein_id=MBO1929130.1;transl_table=11
JAGETS010000018.1	Genbank	gene	34419	34598	.	-	.	ID=gene-J4731_09965;Name=J4731_09965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_09965
JAGETS010000018.1	GeneMarkS-2+	CDS	34419	34598	.	-	0	ID=cds-MBO1929131.1;Parent=gene-J4731_09965;Dbxref=NCBI_GP:MBO1929131.1;Name=MBO1929131.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_09965;product=hypothetical protein;protein_id=MBO1929131.1;transl_table=11
JAGETS010000018.1	Genbank	gene	34808	35125	.	-	.	ID=gene-J4731_09970;Name=J4731_09970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_09970
JAGETS010000018.1	GeneMarkS-2+	CDS	34808	35125	.	-	0	ID=cds-MBO1929132.1;Parent=gene-J4731_09970;Dbxref=NCBI_GP:MBO1929132.1;Name=MBO1929132.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_09970;product=hypothetical protein;protein_id=MBO1929132.1;transl_table=11
JAGETS010000018.1	Genbank	pseudogene	35265	35609	.	-	.	ID=gene-J4731_09975;Name=sufA;gbkey=Gene;gene=sufA;gene_biotype=pseudogene;locus_tag=J4731_09975;pseudo=true
JAGETS010000018.1	Protein Homology	CDS	35265	35609	.	-	0	ID=cds-J4731_09975;Parent=gene-J4731_09975;Note=frameshifted;gbkey=CDS;gene=sufA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012441552.1;locus_tag=J4731_09975;product=Fe-S cluster assembly scaffold SufA;pseudo=true;transl_table=11
JAGETS010000018.1	Genbank	pseudogene	36027	36429	.	-	.	ID=gene-J4731_09980;Name=J4731_09980;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_09980;pseudo=true
JAGETS010000018.1	Protein Homology	CDS	36027	36429	.	-	0	ID=cds-J4731_09980;Parent=gene-J4731_09980;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008911482.1;locus_tag=J4731_09980;product=hotdog fold thioesterase;pseudo=true;transl_table=11
JAGETS010000018.1	Genbank	pseudogene	36464	39428	.	-	.	ID=gene-J4731_09985;Name=J4731_09985;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_09985;pseudo=true
JAGETS010000018.1	Protein Homology	CDS	36464	39428	.	-	0	ID=cds-J4731_09985;Parent=gene-J4731_09985;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006661943.1;locus_tag=J4731_09985;product=FAD-binding oxidoreductase;pseudo=true;transl_table=11
JAGETS010000018.1	Genbank	pseudogene	39703	40785	.	+	.	ID=gene-J4731_09990;Name=ydiK;gbkey=Gene;gene=ydiK;gene_biotype=pseudogene;locus_tag=J4731_09990;pseudo=true
JAGETS010000018.1	Protein Homology	CDS	39703	40785	.	+	0	ID=cds-J4731_09990;Parent=gene-J4731_09990;Note=frameshifted;gbkey=CDS;gene=ydiK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006660095.1;locus_tag=J4731_09990;product=AI-2E family transporter YdiK;pseudo=true;transl_table=11
JAGETS010000018.1	Genbank	pseudogene	41486	43748	.	-	.	ID=gene-J4731_09995;Name=ppsA;gbkey=Gene;gene=ppsA;gene_biotype=pseudogene;locus_tag=J4731_09995;pseudo=true
JAGETS010000018.1	Protein Homology	CDS	41486	43748	.	-	0	ID=cds-J4731_09995;Parent=gene-J4731_09995;Note=frameshifted%3B internal stop;gbkey=CDS;gene=ppsA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001574426.1;locus_tag=J4731_09995;product=phosphoenolpyruvate synthase;pseudo=true;transl_table=11
JAGETS010000018.1	Genbank	pseudogene	44127	44962	.	+	.	ID=gene-J4731_10000;Name=J4731_10000;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_10000;pseudo=true
JAGETS010000018.1	Protein Homology	CDS	44127	44962	.	+	0	ID=cds-J4731_10000;Parent=gene-J4731_10000;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000368046.1;locus_tag=J4731_10000;product=kinase/pyrophosphorylase;pseudo=true;transl_table=11
JAGETS010000018.1	Genbank	pseudogene	45085	46121	.	+	.	ID=gene-J4731_10005;Name=J4731_10005;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_10005;pseudo=true
JAGETS010000018.1	Protein Homology	CDS	45085	46121	.	+	0	ID=cds-J4731_10005;Parent=gene-J4731_10005;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004919139.1;locus_tag=J4731_10005;product=3-deoxy-7-phosphoheptulonate synthase;pseudo=true;transl_table=11
JAGETS010000018.1	Genbank	pseudogene	46484	48616	.	+	.	ID=gene-J4731_10010;Name=J4731_10010;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_10010;pseudo=true
JAGETS010000018.1	Protein Homology	CDS	46484	48616	.	+	0	ID=cds-J4731_10010;Parent=gene-J4731_10010;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004263756.1;locus_tag=J4731_10010;product=TonB-dependent receptor;pseudo=true;transl_table=11
JAGETS010000018.1	Genbank	pseudogene	48745	49764	.	+	.	ID=gene-J4731_10015;Name=J4731_10015;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_10015;pseudo=true
JAGETS010000018.1	Protein Homology	CDS	48745	49764	.	+	0	ID=cds-J4731_10015;Parent=gene-J4731_10015;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013510401.1;locus_tag=J4731_10015;product=hemin-degrading factor;pseudo=true;transl_table=11
JAGETS010000018.1	Genbank	pseudogene	50378	50747	.	+	.	ID=gene-J4731_10020;Name=J4731_10020;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_10020;pseudo=true
JAGETS010000018.1	Protein Homology	CDS	50378	50747	.	+	0	ID=cds-J4731_10020;Parent=gene-J4731_10020;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006813273.1;locus_tag=J4731_10020;product=helix-turn-helix domain-containing protein;pseudo=true;transl_table=11
JAGETS010000018.1	Genbank	pseudogene	50825	51835	.	-	.	ID=gene-J4731_10025;Name=J4731_10025;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_10025;pseudo=true
JAGETS010000018.1	Protein Homology	CDS	50825	51835	.	-	0	ID=cds-J4731_10025;Parent=gene-J4731_10025;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016151611.1;locus_tag=J4731_10025;product=lipoate--protein ligase;pseudo=true;transl_table=11
JAGETS010000018.1	Genbank	pseudogene	51899	52383	.	-	.	ID=gene-J4731_10030;Name=J4731_10030;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_10030;pseudo=true
JAGETS010000018.1	Protein Homology	CDS	51899	52383	.	-	0	ID=cds-J4731_10030;Parent=gene-J4731_10030;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014658203.1;locus_tag=J4731_10030;product=C40 family peptidase;pseudo=true;transl_table=11
JAGETS010000018.1	Genbank	pseudogene	52458	52864	.	-	.	ID=gene-J4731_10035;Name=J4731_10035;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_10035;pseudo=true
JAGETS010000018.1	Protein Homology	CDS	52458	52864	.	-	0	ID=cds-J4731_10035;Parent=gene-J4731_10035;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004263744.1;locus_tag=J4731_10035;product=4-amino-4-deoxy-L-arabinose-phospho-UDP flippase;pseudo=true;transl_table=11
JAGETS010000018.1	Genbank	gene	52861	53208	.	-	.	ID=gene-J4731_10040;Name=J4731_10040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_10040
JAGETS010000018.1	Protein Homology	CDS	52861	53208	.	-	0	ID=cds-MBO1929133.1;Parent=gene-J4731_10040;Dbxref=NCBI_GP:MBO1929133.1;Name=MBO1929133.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006659463.1;locus_tag=J4731_10040;product=EamA family transporter;protein_id=MBO1929133.1;transl_table=11
JAGETS010000018.1	Genbank	gene	53311	53706	.	-	.	ID=gene-J4731_10045;Name=J4731_10045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_10045
JAGETS010000018.1	GeneMarkS-2+	CDS	53311	53706	.	-	0	ID=cds-MBO1929134.1;Parent=gene-J4731_10045;Dbxref=NCBI_GP:MBO1929134.1;Name=MBO1929134.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_10045;product=hypothetical protein;protein_id=MBO1929134.1;transl_table=11
JAGETS010000018.1	Genbank	gene	53825	54145	.	-	.	ID=gene-J4731_10050;Name=J4731_10050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_10050
JAGETS010000018.1	GeneMarkS-2+	CDS	53825	54145	.	-	0	ID=cds-MBO1929135.1;Parent=gene-J4731_10050;Dbxref=NCBI_GP:MBO1929135.1;Name=MBO1929135.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_10050;product=hypothetical protein;protein_id=MBO1929135.1;transl_table=11
JAGETS010000018.1	Genbank	gene	54296	54697	.	-	.	ID=gene-J4731_10055;Name=J4731_10055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_10055
JAGETS010000018.1	Protein Homology	CDS	54296	54697	.	-	0	ID=cds-MBO1929136.1;Parent=gene-J4731_10055;Dbxref=NCBI_GP:MBO1929136.1;Name=MBO1929136.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014425.1;locus_tag=J4731_10055;product=phospholipid carrier-dependent glycosyltransferase;protein_id=MBO1929136.1;transl_table=11
JAGETS010000018.1	Genbank	pseudogene	54789	55728	.	-	.	ID=gene-J4731_10060;Name=J4731_10060;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_10060;pseudo=true
JAGETS010000018.1	Protein Homology	CDS	54789	55728	.	-	0	ID=cds-J4731_10060;Parent=gene-J4731_10060;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016150693.1;locus_tag=J4731_10060;product=4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase;pseudo=true;transl_table=11
JAGETS010000018.1	Genbank	pseudogene	55728	57698	.	-	.	ID=gene-J4731_10065;Name=arnA;gbkey=Gene;gene=arnA;gene_biotype=pseudogene;locus_tag=J4731_10065;pseudo=true
JAGETS010000018.1	Protein Homology	CDS	55728	57698	.	-	0	ID=cds-J4731_10065;Parent=gene-J4731_10065;Note=frameshifted;gbkey=CDS;gene=arnA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004263736.1;locus_tag=J4731_10065;product=bifunctional UDP-4-amino-4-deoxy-L-arabinose formyltransferase/UDP-glucuronic acid oxidase ArnA;pseudo=true;transl_table=11
JAGETS010000018.1	Genbank	pseudogene	57698	58683	.	-	.	ID=gene-J4731_10070;Name=arnC;gbkey=Gene;gene=arnC;gene_biotype=pseudogene;locus_tag=J4731_10070;pseudo=true
JAGETS010000018.1	Protein Homology	CDS	57698	58683	.	-	0	ID=cds-J4731_10070;Parent=gene-J4731_10070;Note=frameshifted;gbkey=CDS;gene=arnC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006813281.1;locus_tag=J4731_10070;product=undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase;pseudo=true;transl_table=11
JAGETS010000018.1	Genbank	pseudogene	58667	59821	.	-	.	ID=gene-J4731_10075;Name=arnB;gbkey=Gene;gene=arnB;gene_biotype=pseudogene;locus_tag=J4731_10075;pseudo=true
JAGETS010000018.1	Protein Homology	CDS	58667	59821	.	-	0	ID=cds-J4731_10075;Parent=gene-J4731_10075;Note=frameshifted;gbkey=CDS;gene=arnB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004874218.1;locus_tag=J4731_10075;product=UDP-4-amino-4-deoxy-L-arabinose aminotransferase;pseudo=true;transl_table=11
JAGETS010000018.1	Genbank	pseudogene	59937	60715	.	-	.	ID=gene-J4731_10080;Name=J4731_10080;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_10080;pseudo=true
JAGETS010000018.1	Protein Homology	CDS	59937	60715	.	-	0	ID=cds-J4731_10080;Parent=gene-J4731_10080;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004263727.1;locus_tag=J4731_10080;product=ATP-binding cassette domain-containing protein;pseudo=true;transl_table=11
JAGETS010000018.1	Genbank	pseudogene	60706	61645	.	-	.	ID=gene-J4731_10085;Name=btuC;gbkey=Gene;gene=btuC;gene_biotype=pseudogene;locus_tag=J4731_10085;pseudo=true
JAGETS010000018.1	Protein Homology	CDS	60706	61645	.	-	0	ID=cds-J4731_10085;Parent=gene-J4731_10085;Note=frameshifted%3B internal stop;gbkey=CDS;gene=btuC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006659456.1;locus_tag=J4731_10085;product=vitamin B12 ABC transporter permease BtuC;pseudo=true;transl_table=11
JAGETS010000018.1	Genbank	gene	61878	62174	.	+	.	ID=gene-J4731_10090;Name=J4731_10090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_10090
JAGETS010000018.1	GeneMarkS-2+	CDS	61878	62174	.	+	0	ID=cds-MBO1929137.1;Parent=gene-J4731_10090;Dbxref=NCBI_GP:MBO1929137.1;Name=MBO1929137.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_10090;product=hypothetical protein;protein_id=MBO1929137.1;transl_table=11
JAGETS010000018.1	Genbank	gene	62267	62437	.	+	.	ID=gene-J4731_10095;Name=J4731_10095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_10095
JAGETS010000018.1	GeneMarkS-2+	CDS	62267	62437	.	+	0	ID=cds-MBO1929138.1;Parent=gene-J4731_10095;Dbxref=NCBI_GP:MBO1929138.1;Name=MBO1929138.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_10095;product=hypothetical protein;protein_id=MBO1929138.1;transl_table=11
JAGETS010000018.1	Genbank	gene	62931	63254	.	-	.	ID=gene-J4731_10100;Name=ihfA;gbkey=Gene;gene=ihfA;gene_biotype=protein_coding;locus_tag=J4731_10100
JAGETS010000018.1	Protein Homology	CDS	62931	63254	.	-	0	ID=cds-MBO1929139.1;Parent=gene-J4731_10100;Dbxref=NCBI_GP:MBO1929139.1;Name=MBO1929139.1;gbkey=CDS;gene=ihfA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012769674.1;locus_tag=J4731_10100;product=integration host factor subunit alpha;protein_id=MBO1929139.1;transl_table=11
JAGETS010000018.1	Genbank	pseudogene	63259	65641	.	-	.	ID=gene-J4731_10105;Name=pheT;gbkey=Gene;gene=pheT;gene_biotype=pseudogene;locus_tag=J4731_10105;pseudo=true
JAGETS010000018.1	Protein Homology	CDS	63259	65641	.	-	0	ID=cds-J4731_10105;Parent=gene-J4731_10105;Note=frameshifted;gbkey=CDS;gene=pheT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460304.1;locus_tag=J4731_10105;product=phenylalanine--tRNA ligase subunit beta;pseudo=true;transl_table=11
JAGETS010000018.1	Genbank	pseudogene	65656	66631	.	-	.	ID=gene-J4731_10110;Name=pheS;gbkey=Gene;gene=pheS;gene_biotype=pseudogene;locus_tag=J4731_10110;pseudo=true
JAGETS010000018.1	Protein Homology	CDS	65656	66631	.	-	0	ID=cds-J4731_10110;Parent=gene-J4731_10110;Note=frameshifted%3B internal stop;gbkey=CDS;gene=pheS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004851795.1;locus_tag=J4731_10110;product=phenylalanine--tRNA ligase subunit alpha;pseudo=true;transl_table=11
JAGETS010000018.1	cmsearch	sequence_feature	66752	66874	.	-	.	ID=id-JAGETS010000018.1:66752..66874;Dbxref=RFAM:RF01859;Note=Phe leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.1
JAGETS010000018.1	Genbank	pseudogene	67034	67316	.	-	.	ID=gene-J4731_10115;Name=rplT;gbkey=Gene;gene=rplT;gene_biotype=pseudogene;locus_tag=J4731_10115;pseudo=true
JAGETS010000018.1	Protein Homology	CDS	67034	67316	.	-	0	ID=cds-J4731_10115;Parent=gene-J4731_10115;Note=frameshifted;gbkey=CDS;gene=rplT;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001670934.1;locus_tag=J4731_10115;product=50S ribosomal protein L20;pseudo=true;transl_table=11
JAGETS010000018.1	Genbank	pseudogene	67363	67559	.	-	.	ID=gene-J4731_10120;Name=rpmI;gbkey=Gene;gene=rpmI;gene_biotype=pseudogene;locus_tag=J4731_10120;pseudo=true
JAGETS010000018.1	Protein Homology	CDS	67363	67559	.	-	0	ID=cds-J4731_10120;Parent=gene-J4731_10120;Note=frameshifted;gbkey=CDS;gene=rpmI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006708231.1;locus_tag=J4731_10120;product=50S ribosomal protein L35;pseudo=true;transl_table=11
JAGETS010000018.1	Genbank	gene	67655	68185	.	-	.	ID=gene-J4731_10125;Name=infC;gbkey=Gene;gene=infC;gene_biotype=protein_coding;locus_tag=J4731_10125
JAGETS010000018.1	Protein Homology	CDS	67655	68185	.	-	0	ID=cds-MBO1929140.1;Parent=gene-J4731_10125;Dbxref=NCBI_GP:MBO1929140.1;Name=MBO1929140.1;gbkey=CDS;gene=infC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310452.1;locus_tag=J4731_10125;product=translation initiation factor IF-3;protein_id=MBO1929140.1;transl_table=11
JAGETS010000018.1	Genbank	gene	68530	69027	.	-	.	ID=gene-J4731_10130;Name=infC;gbkey=Gene;gene=infC;gene_biotype=protein_coding;locus_tag=J4731_10130
JAGETS010000018.1	Protein Homology	CDS	68530	69027	.	-	0	ID=cds-MBO1929141.1;Parent=gene-J4731_10130;Dbxref=NCBI_GP:MBO1929141.1;Name=MBO1929141.1;gbkey=CDS;gene=infC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310452.1;locus_tag=J4731_10130;product=translation initiation factor IF-3;protein_id=MBO1929141.1;transl_table=11
JAGETS010000018.1	Genbank	pseudogene	69072	70989	.	-	.	ID=gene-J4731_10135;Name=thrS;gbkey=Gene;gene=thrS;gene_biotype=pseudogene;locus_tag=J4731_10135;pseudo=true
JAGETS010000018.1	Protein Homology	CDS	69072	70989	.	-	0	ID=cds-J4731_10135;Parent=gene-J4731_10135;Note=frameshifted;gbkey=CDS;gene=thrS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006894721.1;locus_tag=J4731_10135;product=threonine--tRNA ligase;pseudo=true;transl_table=11
JAGETS010000018.1	Genbank	pseudogene	71909	72351	.	-	.	ID=gene-J4731_10140;Name=J4731_10140;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_10140;pseudo=true
JAGETS010000018.1	Protein Homology	CDS	71909	72351	.	-	0	ID=cds-J4731_10140;Parent=gene-J4731_10140;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004919071.1;locus_tag=J4731_10140;product=isoprenylcysteine carboxylmethyltransferase family protein;pseudo=true;transl_table=11
JAGETS010000018.1	Genbank	pseudogene	72455	72815	.	-	.	ID=gene-J4731_10145;Name=J4731_10145;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_10145;pseudo=true
JAGETS010000018.1	Protein Homology	CDS	72455	72815	.	-	0	ID=cds-J4731_10145;Parent=gene-J4731_10145;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006659445.1;locus_tag=J4731_10145;product=hypothetical protein;pseudo=true;transl_table=11
JAGETS010000018.1	Genbank	pseudogene	72996	73356	.	-	.	ID=gene-J4731_10150;Name=J4731_10150;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_10150;pseudo=true
JAGETS010000018.1	Protein Homology	CDS	72996	73356	.	-	0	ID=cds-J4731_10150;Parent=gene-J4731_10150;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012579083.1;locus_tag=J4731_10150;product=VOC family protein;pseudo=true;transl_table=11
JAGETS010000018.1	Genbank	pseudogene	73814	74514	.	+	.	ID=gene-J4731_10155;Name=J4731_10155;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_10155;pseudo=true
JAGETS010000018.1	Protein Homology	CDS	73814	74514	.	+	0	ID=cds-J4731_10155;Parent=gene-J4731_10155;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006661975.1;locus_tag=J4731_10155;product=MarC family NAAT transporter;pseudo=true;transl_table=11
JAGETS010000018.1	Genbank	pseudogene	74508	75130	.	-	.	ID=gene-J4731_10160;Name=J4731_10160;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_10160;pseudo=true
JAGETS010000018.1	Protein Homology	CDS	74508	75130	.	-	0	ID=cds-J4731_10160;Parent=gene-J4731_10160;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004919061.1;locus_tag=J4731_10160;product=transglycosylase SLT domain-containing protein;pseudo=true;transl_table=11
JAGETS010000018.1	Genbank	pseudogene	75436	76341	.	+	.	ID=gene-J4731_10165;Name=J4731_10165;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_10165;pseudo=true
JAGETS010000018.1	Protein Homology	CDS	75436	76341	.	+	0	ID=cds-J4731_10165;Parent=gene-J4731_10165;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004919060.1;locus_tag=J4731_10165;product=metal ABC transporter substrate-binding protein;pseudo=true;transl_table=11
JAGETS010000018.1	Genbank	pseudogene	76343	77233	.	+	.	ID=gene-J4731_10170;Name=J4731_10170;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_10170;pseudo=true
JAGETS010000018.1	Protein Homology	CDS	76343	77233	.	+	0	ID=cds-J4731_10170;Parent=gene-J4731_10170;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015834003.1;locus_tag=J4731_10170;product=manganese/iron ABC transporter ATP-binding protein;pseudo=true;transl_table=11
JAGETS010000018.1	Genbank	pseudogene	77226	78064	.	+	.	ID=gene-J4731_10175;Name=J4731_10175;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_10175;pseudo=true
JAGETS010000018.1	Protein Homology	CDS	77226	78064	.	+	0	ID=cds-J4731_10175;Parent=gene-J4731_10175;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005161605.1;locus_tag=J4731_10175;product=metal ABC transporter permease;pseudo=true;transl_table=11
JAGETS010000018.1	Genbank	pseudogene	78101	78964	.	+	.	ID=gene-J4731_10180;Name=J4731_10180;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_10180;pseudo=true
JAGETS010000018.1	Protein Homology	CDS	78101	78964	.	+	0	ID=cds-J4731_10180;Parent=gene-J4731_10180;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006659439.1;locus_tag=J4731_10180;product=metal ABC transporter permease;pseudo=true;transl_table=11
JAGETS010000018.1	Genbank	gene	79123	79272	.	-	.	ID=gene-J4731_10185;Name=J4731_10185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_10185
JAGETS010000018.1	GeneMarkS-2+	CDS	79123	79272	.	-	0	ID=cds-MBO1929142.1;Parent=gene-J4731_10185;Dbxref=NCBI_GP:MBO1929142.1;Name=MBO1929142.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_10185;product=hypothetical protein;protein_id=MBO1929142.1;transl_table=11
JAGETS010000018.1	Genbank	gene	79305	79646	.	-	.	ID=gene-J4731_10190;Name=J4731_10190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_10190
JAGETS010000018.1	GeneMarkS-2+	CDS	79305	79646	.	-	0	ID=cds-MBO1929143.1;Parent=gene-J4731_10190;Dbxref=NCBI_GP:MBO1929143.1;Name=MBO1929143.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_10190;product=hypothetical protein;protein_id=MBO1929143.1;transl_table=11
JAGETS010000018.1	Genbank	gene	79621	80058	.	-	.	ID=gene-J4731_10195;Name=J4731_10195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_10195
JAGETS010000018.1	GeneMarkS-2+	CDS	79621	80058	.	-	0	ID=cds-MBO1929144.1;Parent=gene-J4731_10195;Dbxref=NCBI_GP:MBO1929144.1;Name=MBO1929144.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_10195;product=hypothetical protein;protein_id=MBO1929144.1;transl_table=11
JAGETS010000018.1	Genbank	gene	80046	80360	.	-	.	ID=gene-J4731_10200;Name=J4731_10200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_10200
JAGETS010000018.1	GeneMarkS-2+	CDS	80046	80360	.	-	0	ID=cds-MBO1929145.1;Parent=gene-J4731_10200;Dbxref=NCBI_GP:MBO1929145.1;Name=MBO1929145.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_10200;product=hypothetical protein;protein_id=MBO1929145.1;transl_table=11
JAGETS010000018.1	Genbank	pseudogene	80424	82318	.	-	.	ID=gene-J4731_10205;Name=J4731_10205;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_10205;pseudo=true
JAGETS010000018.1	Protein Homology	CDS	80424	82318	.	-	0	ID=cds-J4731_10205;Parent=gene-J4731_10205;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008911181.1;locus_tag=J4731_10205;product=hypothetical protein;pseudo=true;transl_table=11
JAGETS010000018.1	Genbank	gene	82404	82790	.	-	.	ID=gene-J4731_10210;Name=J4731_10210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_10210
JAGETS010000018.1	GeneMarkS-2+	CDS	82404	82790	.	-	0	ID=cds-MBO1929146.1;Parent=gene-J4731_10210;Dbxref=NCBI_GP:MBO1929146.1;Name=MBO1929146.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_10210;product=hypothetical protein;protein_id=MBO1929146.1;transl_table=11
JAGETS010000018.1	Genbank	gene	82938	83330	.	-	.	ID=gene-J4731_10215;Name=J4731_10215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_10215
JAGETS010000018.1	GeneMarkS-2+	CDS	82938	83330	.	-	0	ID=cds-MBO1929147.1;Parent=gene-J4731_10215;Dbxref=NCBI_GP:MBO1929147.1;Name=MBO1929147.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_10215;product=hypothetical protein;protein_id=MBO1929147.1;transl_table=11
JAGETS010000018.1	Genbank	gene	83431	83682	.	-	.	ID=gene-J4731_10220;Name=J4731_10220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_10220
JAGETS010000018.1	GeneMarkS-2+	CDS	83431	83682	.	-	0	ID=cds-MBO1929148.1;Parent=gene-J4731_10220;Dbxref=NCBI_GP:MBO1929148.1;Name=MBO1929148.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_10220;product=hypothetical protein;protein_id=MBO1929148.1;transl_table=11
JAGETS010000018.1	Genbank	gene	83715	84536	.	-	.	ID=gene-J4731_10225;Name=J4731_10225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_10225
JAGETS010000018.1	Protein Homology	CDS	83715	84536	.	-	0	ID=cds-MBO1929149.1;Parent=gene-J4731_10225;Dbxref=NCBI_GP:MBO1929149.1;Name=MBO1929149.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024593.1;locus_tag=J4731_10225;product=DUF4011 domain-containing protein;protein_id=MBO1929149.1;transl_table=11
JAGETS010000018.1	Genbank	gene	84957	85235	.	-	.	ID=gene-J4731_10230;Name=J4731_10230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_10230
JAGETS010000018.1	GeneMarkS-2+	CDS	84957	85235	.	-	0	ID=cds-MBO1929150.1;Parent=gene-J4731_10230;Dbxref=NCBI_GP:MBO1929150.1;Name=MBO1929150.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_10230;product=hypothetical protein;protein_id=MBO1929150.1;transl_table=11
JAGETS010000018.1	Genbank	gene	85407	85703	.	+	.	ID=gene-J4731_10235;Name=J4731_10235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_10235
JAGETS010000018.1	GeneMarkS-2+	CDS	85407	85703	.	+	0	ID=cds-MBO1929151.1;Parent=gene-J4731_10235;Dbxref=NCBI_GP:MBO1929151.1;Name=MBO1929151.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_10235;product=hypothetical protein;protein_id=MBO1929151.1;transl_table=11
JAGETS010000018.1	Genbank	gene	85698	85898	.	-	.	ID=gene-J4731_10240;Name=J4731_10240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_10240
JAGETS010000018.1	GeneMarkS-2+	CDS	85698	85898	.	-	0	ID=cds-MBO1929152.1;Parent=gene-J4731_10240;Dbxref=NCBI_GP:MBO1929152.1;Name=MBO1929152.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_10240;product=hypothetical protein;protein_id=MBO1929152.1;transl_table=11
JAGETS010000018.1	Genbank	gene	85888	86043	.	-	.	ID=gene-J4731_10245;Name=J4731_10245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_10245
JAGETS010000018.1	GeneMarkS-2+	CDS	85888	86043	.	-	0	ID=cds-MBO1929153.1;Parent=gene-J4731_10245;Dbxref=NCBI_GP:MBO1929153.1;Name=MBO1929153.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_10245;product=hypothetical protein;protein_id=MBO1929153.1;transl_table=11
JAGETS010000018.1	Genbank	gene	86208	86387	.	-	.	ID=gene-J4731_10250;Name=J4731_10250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_10250
JAGETS010000018.1	GeneMarkS-2+	CDS	86208	86387	.	-	0	ID=cds-MBO1929154.1;Parent=gene-J4731_10250;Dbxref=NCBI_GP:MBO1929154.1;Name=MBO1929154.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_10250;product=hypothetical protein;protein_id=MBO1929154.1;transl_table=11
JAGETS010000018.1	Genbank	gene	86899	87084	.	-	.	ID=gene-J4731_10255;Name=J4731_10255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_10255
JAGETS010000018.1	GeneMarkS-2+	CDS	86899	87084	.	-	0	ID=cds-MBO1929155.1;Parent=gene-J4731_10255;Dbxref=NCBI_GP:MBO1929155.1;Name=MBO1929155.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_10255;product=hypothetical protein;protein_id=MBO1929155.1;transl_table=11
JAGETS010000018.1	Genbank	gene	87009	87200	.	-	.	ID=gene-J4731_10260;Name=J4731_10260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_10260
JAGETS010000018.1	Protein Homology	CDS	87009	87200	.	-	0	ID=cds-MBO1929156.1;Parent=gene-J4731_10260;Dbxref=NCBI_GP:MBO1929156.1;Name=MBO1929156.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024747.1;locus_tag=J4731_10260;product=4Fe-4S cluster-binding domain-containing protein;protein_id=MBO1929156.1;transl_table=11
JAGETS010000018.1	Genbank	pseudogene	87264	89068	.	-	.	ID=gene-J4731_10265;Name=J4731_10265;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_10265;pseudo=true
JAGETS010000018.1	Protein Homology	CDS	87264	89068	.	-	0	ID=cds-J4731_10265;Parent=gene-J4731_10265;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008911183.1;locus_tag=J4731_10265;product=ATP-dependent Clp protease ATP-binding subunit;pseudo=true;transl_table=11
JAGETS010000018.1	Genbank	pseudogene	89349	90247	.	+	.	ID=gene-J4731_10270;Name=J4731_10270;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_10270;pseudo=true
JAGETS010000018.1	Protein Homology	CDS	89349	90247	.	+	0	ID=cds-J4731_10270;Parent=gene-J4731_10270;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004242583.1;locus_tag=J4731_10270;product=fructosamine kinase family protein;pseudo=true;transl_table=11
JAGETS010000018.1	Genbank	pseudogene	90519	90990	.	-	.	ID=gene-J4731_10275;Name=J4731_10275;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_10275;pseudo=true
JAGETS010000018.1	Protein Homology	CDS	90519	90990	.	-	0	ID=cds-J4731_10275;Parent=gene-J4731_10275;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014658188.1;locus_tag=J4731_10275;product=hypothetical protein;pseudo=true;transl_table=11
JAGETS010000018.1	Genbank	pseudogene	91307	91925	.	+	.	ID=gene-J4731_10280;Name=hxpB;gbkey=Gene;gene=hxpB;gene_biotype=pseudogene;locus_tag=J4731_10280;pseudo=true
JAGETS010000018.1	Protein Homology	CDS	91307	91925	.	+	0	ID=cds-J4731_10280;Parent=gene-J4731_10280;Note=frameshifted%3B internal stop;gbkey=CDS;gene=hxpB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014538983.1;locus_tag=J4731_10280;product=hexitol phosphatase HxpB;pseudo=true;transl_table=11
JAGETS010000018.1	Genbank	pseudogene	92142	92665	.	+	.	ID=gene-J4731_10285;Name=J4731_10285;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_10285;pseudo=true
JAGETS010000018.1	Protein Homology	CDS	92142	92665	.	+	0	ID=cds-J4731_10285;Parent=gene-J4731_10285;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006661982.1;locus_tag=J4731_10285;product=metal-dependent hydrolase;pseudo=true;transl_table=11
JAGETS010000018.1	Genbank	pseudogene	92845	94326	.	+	.	ID=gene-J4731_10290;Name=J4731_10290;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_10290;pseudo=true
JAGETS010000018.1	Protein Homology	CDS	92845	94326	.	+	0	ID=cds-J4731_10290;Parent=gene-J4731_10290;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015461406.1;locus_tag=J4731_10290;product=L-cystine transporter;pseudo=true;transl_table=11
JAGETS010000018.1	Genbank	pseudogene	94452	94828	.	+	.	ID=gene-J4731_10295;Name=J4731_10295;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_10295;pseudo=true
JAGETS010000018.1	Protein Homology	CDS	94452	94828	.	+	0	ID=cds-J4731_10295;Parent=gene-J4731_10295;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004263619.1;locus_tag=J4731_10295;product=YkgJ family cysteine cluster protein;pseudo=true;transl_table=11
JAGETS010000018.1	Genbank	pseudogene	94918	95908	.	-	.	ID=gene-J4731_10300;Name=J4731_10300;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_10300;pseudo=true
JAGETS010000018.1	Protein Homology	CDS	94918	95908	.	-	0	ID=cds-J4731_10300;Parent=gene-J4731_10300;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417629.1;locus_tag=J4731_10300;product=luciferase-like monooxygenase;pseudo=true;transl_table=11
JAGETS010000018.1	Genbank	pseudogene	96173	96476	.	+	.	ID=gene-J4731_10305;Name=J4731_10305;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_10305;pseudo=true
JAGETS010000018.1	Protein Homology	CDS	96173	96476	.	+	0	ID=cds-J4731_10305;Parent=gene-J4731_10305;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006659431.1;locus_tag=J4731_10305;product=hypothetical protein;pseudo=true;transl_table=11
JAGETS010000018.1	Genbank	gene	96867	97040	.	+	.	ID=gene-J4731_10310;Name=J4731_10310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_10310
JAGETS010000018.1	Protein Homology	CDS	96867	97040	.	+	0	ID=cds-MBO1929157.1;Parent=gene-J4731_10310;Dbxref=NCBI_GP:MBO1929157.1;Name=MBO1929157.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004263611.1;locus_tag=J4731_10310;product=YegP family protein;protein_id=MBO1929157.1;transl_table=11
JAGETS010000018.1	Genbank	pseudogene	97182	97498	.	-	.	ID=gene-J4731_10315;Name=J4731_10315;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_10315;pseudo=true
JAGETS010000018.1	Protein Homology	CDS	97182	97498	.	-	0	ID=cds-J4731_10315;Parent=gene-J4731_10315;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004263608.1;locus_tag=J4731_10315;product=AzlD domain-containing protein;pseudo=true;transl_table=11
JAGETS010000018.1	Genbank	pseudogene	97501	98117	.	-	.	ID=gene-J4731_10320;Name=J4731_10320;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_10320;pseudo=true
JAGETS010000018.1	Protein Homology	CDS	97501	98117	.	-	0	ID=cds-J4731_10320;Parent=gene-J4731_10320;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012814821.1;locus_tag=J4731_10320;product=AzlC family ABC transporter permease;pseudo=true;transl_table=11
JAGETS010000018.1	Genbank	pseudogene	98247	98800	.	+	.	ID=gene-J4731_10325;Name=J4731_10325;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_10325;pseudo=true
JAGETS010000018.1	Protein Homology	CDS	98247	98800	.	+	0	ID=cds-J4731_10325;Parent=gene-J4731_10325;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004919030.1;locus_tag=J4731_10325;product=helix-turn-helix transcriptional regulator;pseudo=true;transl_table=11
JAGETS010000018.1	Genbank	gene	98868	99044	.	+	.	ID=gene-J4731_10330;Name=J4731_10330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_10330
JAGETS010000018.1	Protein Homology	CDS	98868	99044	.	+	0	ID=cds-MBO1929158.1;Parent=gene-J4731_10330;Dbxref=NCBI_GP:MBO1929158.1;Name=MBO1929158.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004263596.1;locus_tag=J4731_10330;product=DUF2526 family protein;protein_id=MBO1929158.1;transl_table=11
JAGETS010000018.1	Genbank	pseudogene	99172	100214	.	-	.	ID=gene-J4731_10335;Name=J4731_10335;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_10335;pseudo=true
JAGETS010000018.1	Protein Homology	CDS	99172	100214	.	-	0	ID=cds-J4731_10335;Parent=gene-J4731_10335;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004104498.1;locus_tag=J4731_10335;product=amidohydrolase;pseudo=true;transl_table=11
JAGETS010000018.1	Genbank	pseudogene	100384	101610	.	-	.	ID=gene-J4731_10340;Name=J4731_10340;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_10340;pseudo=true
JAGETS010000018.1	Protein Homology	CDS	100384	101610	.	-	0	ID=cds-J4731_10340;Parent=gene-J4731_10340;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004263588.1;locus_tag=J4731_10340;product=Zn-dependent hydrolase;pseudo=true;transl_table=11
JAGETS010000018.1	Genbank	pseudogene	101616	102824	.	-	.	ID=gene-J4731_10345;Name=J4731_10345;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_10345;pseudo=true
JAGETS010000018.1	Protein Homology	CDS	101616	102824	.	-	0	ID=cds-J4731_10345;Parent=gene-J4731_10345;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004104497.1;locus_tag=J4731_10345;product=hypothetical protein;pseudo=true;transl_table=11
JAGETS010000018.1	Genbank	pseudogene	103483	104730	.	-	.	ID=gene-J4731_10350;Name=J4731_10350;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_10350;pseudo=true
JAGETS010000018.1	Protein Homology	CDS	103483	104730	.	-	0	ID=cds-J4731_10350;Parent=gene-J4731_10350;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009635213.1;locus_tag=J4731_10350;product=RbtT/DalT/CsbX family MFS transporter;pseudo=true;transl_table=11
JAGETS010000018.1	Genbank	pseudogene	104764	106273	.	-	.	ID=gene-J4731_10355;Name=xylB;gbkey=Gene;gene=xylB;gene_biotype=pseudogene;locus_tag=J4731_10355;pseudo=true
JAGETS010000018.1	Protein Homology	CDS	104764	106273	.	-	0	ID=cds-J4731_10355;Parent=gene-J4731_10355;Note=frameshifted%3B internal stop;gbkey=CDS;gene=xylB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010258023.1;locus_tag=J4731_10355;product=xylulokinase;pseudo=true;transl_table=11
JAGETS010000018.1	Genbank	pseudogene	106285	107666	.	-	.	ID=gene-J4731_10360;Name=J4731_10360;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_10360;pseudo=true
JAGETS010000018.1	Protein Homology	CDS	106285	107666	.	-	0	ID=cds-J4731_10360;Parent=gene-J4731_10360;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014657476.1;locus_tag=J4731_10360;product=mannitol dehydrogenase family protein;pseudo=true;transl_table=11
JAGETS010000018.1	Genbank	pseudogene	107859	108779	.	+	.	ID=gene-J4731_10365;Name=J4731_10365;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_10365;pseudo=true
JAGETS010000018.1	Protein Homology	CDS	107859	108779	.	+	0	ID=cds-J4731_10365;Parent=gene-J4731_10365;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017800007.1;locus_tag=J4731_10365;product=sugar-binding transcriptional regulator;pseudo=true;transl_table=11
JAGETS010000018.1	Genbank	gene	108781	109161	.	-	.	ID=gene-J4731_10370;Name=crcB;gbkey=Gene;gene=crcB;gene_biotype=protein_coding;locus_tag=J4731_10370
JAGETS010000018.1	Protein Homology	CDS	108781	109161	.	-	0	ID=cds-MBO1929159.1;Parent=gene-J4731_10370;Dbxref=NCBI_GP:MBO1929159.1;Name=MBO1929159.1;gbkey=CDS;gene=crcB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014657474.1;locus_tag=J4731_10370;product=fluoride efflux transporter CrcB;protein_id=MBO1929159.1;transl_table=11
JAGETS010000018.1	Genbank	pseudogene	109494	110442	.	-	.	ID=gene-J4731_10375;Name=J4731_10375;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_10375;pseudo=true
JAGETS010000018.1	Protein Homology	CDS	109494	110442	.	-	0	ID=cds-J4731_10375;Parent=gene-J4731_10375;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015673306.1;locus_tag=J4731_10375;product=sugar-binding transcriptional regulator;pseudo=true;transl_table=11
JAGETS010000018.1	Genbank	pseudogene	110611	111250	.	-	.	ID=gene-J4731_10380;Name=dhaL;gbkey=Gene;gene=dhaL;gene_biotype=pseudogene;locus_tag=J4731_10380;pseudo=true
JAGETS010000018.1	Protein Homology	CDS	110611	111250	.	-	0	ID=cds-J4731_10380;Parent=gene-J4731_10380;Note=frameshifted;gbkey=CDS;gene=dhaL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008911556.1;locus_tag=J4731_10380;product=dihydroxyacetone kinase subunit L;pseudo=true;transl_table=11
JAGETS010000018.1	Genbank	pseudogene	111261	112244	.	-	.	ID=gene-J4731_10385;Name=J4731_10385;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_10385;pseudo=true
JAGETS010000018.1	Protein Homology	CDS	111261	112244	.	-	0	ID=cds-J4731_10385;Parent=gene-J4731_10385;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105641.1;locus_tag=J4731_10385;product=dihydroxyacetone kinase subunit DhaK;pseudo=true;transl_table=11
JAGETS010000018.1	Genbank	pseudogene	112256	113510	.	-	.	ID=gene-J4731_10390;Name=J4731_10390;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_10390;pseudo=true
JAGETS010000018.1	Protein Homology	CDS	112256	113510	.	-	0	ID=cds-J4731_10390;Parent=gene-J4731_10390;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014657471.1;locus_tag=J4731_10390;product=MFS transporter;pseudo=true;transl_table=11
JAGETS010000018.1	Genbank	pseudogene	113638	114683	.	-	.	ID=gene-J4731_10395;Name=J4731_10395;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_10395;pseudo=true
JAGETS010000018.1	Protein Homology	CDS	113638	114683	.	-	0	ID=cds-J4731_10395;Parent=gene-J4731_10395;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016926756.1;locus_tag=J4731_10395;product=alcohol dehydrogenase catalytic domain-containing protein;pseudo=true;transl_table=11
JAGETS010000018.1	Genbank	pseudogene	115056	115507	.	+	.	ID=gene-J4731_10400;Name=rpiB;gbkey=Gene;gene=rpiB;gene_biotype=pseudogene;locus_tag=J4731_10400;pseudo=true
JAGETS010000018.1	Protein Homology	CDS	115056	115507	.	+	0	ID=cds-J4731_10400;Parent=gene-J4731_10400;Note=frameshifted;gbkey=CDS;gene=rpiB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004263541.1;locus_tag=J4731_10400;product=ribose 5-phosphate isomerase B;pseudo=true;transl_table=11
JAGETS010000018.1	Genbank	pseudogene	115544	117546	.	+	.	ID=gene-J4731_10405;Name=tkt;gbkey=Gene;gene=tkt;gene_biotype=pseudogene;locus_tag=J4731_10405;pseudo=true
JAGETS010000018.1	Protein Homology	CDS	115544	117546	.	+	0	ID=cds-J4731_10405;Parent=gene-J4731_10405;Note=frameshifted;gbkey=CDS;gene=tkt;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004263536.1;locus_tag=J4731_10405;product=transketolase;pseudo=true;transl_table=11
JAGETS010000018.1	Genbank	pseudogene	117709	118406	.	-	.	ID=gene-J4731_10410;Name=J4731_10410;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_10410;pseudo=true
JAGETS010000018.1	Protein Homology	CDS	117709	118406	.	-	0	ID=cds-J4731_10410;Parent=gene-J4731_10410;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004936585.1;locus_tag=J4731_10410;product=D-threitol dehydrogenase;pseudo=true;transl_table=11
JAGETS010000018.1	Genbank	pseudogene	118917	119567	.	+	.	ID=gene-J4731_10415;Name=fetA;gbkey=Gene;gene=fetA;gene_biotype=pseudogene;locus_tag=J4731_10415;pseudo=true
JAGETS010000018.1	Protein Homology	CDS	118917	119567	.	+	0	ID=cds-J4731_10415;Parent=gene-J4731_10415;Note=frameshifted;gbkey=CDS;gene=fetA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004263526.1;locus_tag=J4731_10415;product=iron ABC transporter ATP-binding protein FetA;pseudo=true;transl_table=11
JAGETS010000018.1	Genbank	pseudogene	119577	120355	.	+	.	ID=gene-J4731_10420;Name=fetB;gbkey=Gene;gene=fetB;gene_biotype=pseudogene;locus_tag=J4731_10420;pseudo=true
JAGETS010000018.1	Protein Homology	CDS	119577	120355	.	+	0	ID=cds-J4731_10420;Parent=gene-J4731_10420;Note=frameshifted;gbkey=CDS;gene=fetB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004099712.1;locus_tag=J4731_10420;product=iron export ABC transporter permease subunit FetB;pseudo=true;transl_table=11
JAGETS010000018.1	Genbank	pseudogene	120435	121430	.	-	.	ID=gene-J4731_10425;Name=J4731_10425;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_10425;pseudo=true
JAGETS010000018.1	Protein Homology	CDS	120435	121430	.	-	0	ID=cds-J4731_10425;Parent=gene-J4731_10425;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015962081.1;locus_tag=J4731_10425;product=LacI family DNA-binding transcriptional regulator;pseudo=true;transl_table=11
JAGETS010000018.1	Genbank	pseudogene	121663	122386	.	+	.	ID=gene-J4731_10430;Name=J4731_10430;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_10430;pseudo=true
JAGETS010000018.1	Protein Homology	CDS	121663	122386	.	+	0	ID=cds-J4731_10430;Parent=gene-J4731_10430;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227906.1;locus_tag=J4731_10430;product=SDR family oxidoreductase;pseudo=true;transl_table=11
JAGETS010000018.1	Genbank	pseudogene	122431	124050	.	+	.	ID=gene-J4731_10435;Name=J4731_10435;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_10435;pseudo=true
JAGETS010000018.1	Protein Homology	CDS	122431	124050	.	+	0	ID=cds-J4731_10435;Parent=gene-J4731_10435;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004263510.1;locus_tag=J4731_10435;product=FGGY-family carbohydrate kinase;pseudo=true;transl_table=11
JAGETS010000018.1	Genbank	pseudogene	124174	124560	.	-	.	ID=gene-J4731_10440;Name=J4731_10440;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_10440;pseudo=true
JAGETS010000018.1	Protein Homology	CDS	124174	124560	.	-	0	ID=cds-J4731_10440;Parent=gene-J4731_10440;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004263505.1;locus_tag=J4731_10440;product=hypothetical protein;pseudo=true;transl_table=11
JAGETS010000018.1	Genbank	gene	125615	125893	.	+	.	ID=gene-J4731_10445;Name=J4731_10445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_10445
JAGETS010000018.1	Protein Homology	CDS	125615	125893	.	+	0	ID=cds-MBO1929160.1;Parent=gene-J4731_10445;Dbxref=NCBI_GP:MBO1929160.1;Name=MBO1929160.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004263500.1;locus_tag=J4731_10445;product=hypothetical protein;protein_id=MBO1929160.1;transl_table=11
JAGETS010000018.1	Genbank	pseudogene	125973	126787	.	-	.	ID=gene-J4731_10450;Name=J4731_10450;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_10450;pseudo=true
JAGETS010000018.1	Protein Homology	CDS	125973	126787	.	-	0	ID=cds-J4731_10450;Parent=gene-J4731_10450;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002440957.1;locus_tag=J4731_10450;product=endonuclease/exonuclease/phosphatase family protein;pseudo=true;transl_table=11
JAGETS010000018.1	Genbank	pseudogene	127107	128134	.	-	.	ID=gene-J4731_10455;Name=J4731_10455;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_10455;pseudo=true
JAGETS010000018.1	Protein Homology	CDS	127107	128134	.	-	0	ID=cds-J4731_10455;Parent=gene-J4731_10455;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008911570.1;locus_tag=J4731_10455;product=LacI family DNA-binding transcriptional regulator;pseudo=true;transl_table=11
JAGETS010000018.1	Genbank	pseudogene	128497	128934	.	+	.	ID=gene-J4731_10460;Name=J4731_10460;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_10460;pseudo=true
JAGETS010000018.1	Protein Homology	CDS	128497	128934	.	+	0	ID=cds-J4731_10460;Parent=gene-J4731_10460;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006659413.1;locus_tag=J4731_10460;product=PTS sugar transporter subunit IIA;pseudo=true;transl_table=11
JAGETS010000018.1	Genbank	pseudogene	128954	129235	.	+	.	ID=gene-J4731_10465;Name=J4731_10465;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_10465;pseudo=true
JAGETS010000018.1	Protein Homology	CDS	128954	129235	.	+	0	ID=cds-J4731_10465;Parent=gene-J4731_10465;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004717867.1;locus_tag=J4731_10465;product=PTS sugar transporter subunit IIB;pseudo=true;transl_table=11
##sequence-region JAGETS010000019.1 1 139934
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=587
JAGETS010000019.1	Genbank	region	1	139934	.	+	.	ID=JAGETS010000019.1:1..139934;Dbxref=taxon:587;collected-by=NHLS;collection-date=2018;country=South Africa: Pretoria;gbkey=Src;isolation-source=stool;lat-lon=25.7479 S 28.2293 E;mol_type=genomic DNA;nat-host=porcine;strain=SG003
JAGETS010000019.1	Genbank	pseudogene	1	336	.	-	.	ID=gene-J4731_10470;Name=J4731_10470;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_10470;pseudo=true
JAGETS010000019.1	Protein Homology	CDS	1	336	.	-	0	ID=cds-J4731_10470;Parent=gene-J4731_10470;Note=frameshifted%3B incomplete%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006663055.1;locus_tag=J4731_10470;product=ATP-binding cassette domain-containing protein;pseudo=true;transl_table=11
JAGETS010000019.1	Genbank	pseudogene	358	1318	.	-	.	ID=gene-J4731_10475;Name=dppD;gbkey=Gene;gene=dppD;gene_biotype=pseudogene;locus_tag=J4731_10475;pseudo=true
JAGETS010000019.1	Protein Homology	CDS	358	1318	.	-	0	ID=cds-J4731_10475;Parent=gene-J4731_10475;Note=frameshifted;gbkey=CDS;gene=dppD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229355.1;locus_tag=J4731_10475;product=dipeptide ABC transporter ATP-binding protein;pseudo=true;transl_table=11
JAGETS010000019.1	Genbank	pseudogene	1331	2226	.	-	.	ID=gene-J4731_10480;Name=dppC;gbkey=Gene;gene=dppC;gene_biotype=pseudogene;locus_tag=J4731_10480;pseudo=true
JAGETS010000019.1	Protein Homology	CDS	1331	2226	.	-	0	ID=cds-J4731_10480;Parent=gene-J4731_10480;Note=frameshifted;gbkey=CDS;gene=dppC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010426221.1;locus_tag=J4731_10480;product=dipeptide ABC transporter permease DppC;pseudo=true;transl_table=11
JAGETS010000019.1	Genbank	pseudogene	2237	3236	.	-	.	ID=gene-J4731_10485;Name=dppB;gbkey=Gene;gene=dppB;gene_biotype=pseudogene;locus_tag=J4731_10485;pseudo=true
JAGETS010000019.1	Protein Homology	CDS	2237	3236	.	-	0	ID=cds-J4731_10485;Parent=gene-J4731_10485;Note=frameshifted;gbkey=CDS;gene=dppB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133865.1;locus_tag=J4731_10485;product=dipeptide ABC transporter permease DppB;pseudo=true;transl_table=11
JAGETS010000019.1	Genbank	pseudogene	3406	4986	.	-	.	ID=gene-J4731_10490;Name=J4731_10490;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_10490;pseudo=true
JAGETS010000019.1	Protein Homology	CDS	3406	4986	.	-	0	ID=cds-J4731_10490;Parent=gene-J4731_10490;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006534623.1;locus_tag=J4731_10490;product=ABC transporter substrate-binding protein;pseudo=true;transl_table=11
JAGETS010000019.1	Genbank	gene	5953	6201	.	-	.	ID=gene-J4731_10495;Name=J4731_10495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_10495
JAGETS010000019.1	GeneMarkS-2+	CDS	5953	6201	.	-	0	ID=cds-MBO1929161.1;Parent=gene-J4731_10495;Dbxref=NCBI_GP:MBO1929161.1;Name=MBO1929161.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_10495;product=hypothetical protein;protein_id=MBO1929161.1;transl_table=11
JAGETS010000019.1	Genbank	gene	6364	6600	.	-	.	ID=gene-J4731_10500;Name=J4731_10500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_10500
JAGETS010000019.1	GeneMarkS-2+	CDS	6364	6600	.	-	0	ID=cds-MBO1929162.1;Parent=gene-J4731_10500;Dbxref=NCBI_GP:MBO1929162.1;Name=MBO1929162.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_10500;product=hypothetical protein;protein_id=MBO1929162.1;transl_table=11
JAGETS010000019.1	Genbank	gene	6695	7048	.	-	.	ID=gene-J4731_10505;Name=J4731_10505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_10505
JAGETS010000019.1	Protein Homology	CDS	6695	7048	.	-	0	ID=cds-MBO1929163.1;Parent=gene-J4731_10505;Dbxref=NCBI_GP:MBO1929163.1;Name=MBO1929163.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020068.1;locus_tag=J4731_10505;product=hypothetical protein;protein_id=MBO1929163.1;transl_table=11
JAGETS010000019.1	Genbank	gene	7336	7409	.	-	.	ID=gene-J4731_10510;Name=J4731_10510;gbkey=Gene;gene_biotype=tRNA;locus_tag=J4731_10510
JAGETS010000019.1	tRNAscan-SE	tRNA	7336	7409	.	-	.	ID=rna-J4731_10510;Parent=gene-J4731_10510;anticodon=(pos:complement(7373..7375));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=J4731_10510;product=tRNA-Pro
JAGETS010000019.1	tRNAscan-SE	exon	7336	7409	.	-	.	ID=exon-J4731_10510-1;Parent=rna-J4731_10510;anticodon=(pos:complement(7373..7375));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=J4731_10510;product=tRNA-Pro
JAGETS010000019.1	Genbank	pseudogene	7629	9652	.	-	.	ID=gene-J4731_10515;Name=glyS;gbkey=Gene;gene=glyS;gene_biotype=pseudogene;locus_tag=J4731_10515;pseudo=true
JAGETS010000019.1	Protein Homology	CDS	7629	9652	.	-	0	ID=cds-J4731_10515;Parent=gene-J4731_10515;Note=frameshifted%3B internal stop;gbkey=CDS;gene=glyS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001291772.1;locus_tag=J4731_10515;product=glycine--tRNA ligase subunit beta;pseudo=true;transl_table=11
JAGETS010000019.1	Genbank	pseudogene	9688	10585	.	-	.	ID=gene-J4731_10520;Name=glyQ;gbkey=Gene;gene=glyQ;gene_biotype=pseudogene;locus_tag=J4731_10520;pseudo=true
JAGETS010000019.1	Protein Homology	CDS	9688	10585	.	-	0	ID=cds-J4731_10520;Parent=gene-J4731_10520;Note=frameshifted;gbkey=CDS;gene=glyQ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229382.1;locus_tag=J4731_10520;product=glycine--tRNA ligase subunit alpha;pseudo=true;transl_table=11
JAGETS010000019.1	Genbank	pseudogene	10781	11338	.	+	.	ID=gene-J4731_10525;Name=J4731_10525;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_10525;pseudo=true
JAGETS010000019.1	Protein Homology	CDS	10781	11338	.	+	0	ID=cds-J4731_10525;Parent=gene-J4731_10525;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006663058.1;locus_tag=J4731_10525;product=DNA-3-methyladenine glycosylase I;pseudo=true;transl_table=11
JAGETS010000019.1	Genbank	pseudogene	11598	12790	.	+	.	ID=gene-J4731_10530;Name=J4731_10530;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_10530;pseudo=true
JAGETS010000019.1	Protein Homology	CDS	11598	12790	.	+	0	ID=cds-J4731_10530;Parent=gene-J4731_10530;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012986854.1;locus_tag=J4731_10530;product=valine--pyruvate transaminase;pseudo=true;transl_table=11
JAGETS010000019.1	Genbank	pseudogene	13117	14770	.	-	.	ID=gene-J4731_10535;Name=J4731_10535;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_10535;pseudo=true
JAGETS010000019.1	Protein Homology	CDS	13117	14770	.	-	0	ID=cds-J4731_10535;Parent=gene-J4731_10535;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006659592.1;locus_tag=J4731_10535;product=putative transporter;pseudo=true;transl_table=11
JAGETS010000019.1	Genbank	pseudogene	15772	17085	.	-	.	ID=gene-J4731_10540;Name=J4731_10540;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_10540;pseudo=true
JAGETS010000019.1	Protein Homology	CDS	15772	17085	.	-	0	ID=cds-J4731_10540;Parent=gene-J4731_10540;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004923712.1;locus_tag=J4731_10540;product=DUF3748 domain-containing protein;pseudo=true;transl_table=11
JAGETS010000019.1	Genbank	pseudogene	17211	17804	.	+	.	ID=gene-J4731_10545;Name=J4731_10545;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_10545;pseudo=true
JAGETS010000019.1	Protein Homology	CDS	17211	17804	.	+	0	ID=cds-J4731_10545;Parent=gene-J4731_10545;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004094081.1;locus_tag=J4731_10545;product=trimeric intracellular cation channel family protein;pseudo=true;transl_table=11
JAGETS010000019.1	Genbank	gene	18117	18461	.	-	.	ID=gene-J4731_10550;Name=J4731_10550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_10550
JAGETS010000019.1	GeneMarkS-2+	CDS	18117	18461	.	-	0	ID=cds-MBO1929164.1;Parent=gene-J4731_10550;Dbxref=NCBI_GP:MBO1929164.1;Name=MBO1929164.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_10550;product=hypothetical protein;protein_id=MBO1929164.1;transl_table=11
JAGETS010000019.1	Genbank	gene	18931	19497	.	-	.	ID=gene-J4731_10555;Name=J4731_10555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_10555
JAGETS010000019.1	Protein Homology	CDS	18931	19497	.	-	0	ID=cds-MBO1929165.1;Parent=gene-J4731_10555;Dbxref=NCBI_GP:MBO1929165.1;Name=MBO1929165.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013790.1;locus_tag=J4731_10555;product=hypothetical protein;protein_id=MBO1929165.1;transl_table=11
JAGETS010000019.1	Genbank	pseudogene	19897	20502	.	+	.	ID=gene-J4731_10560;Name=gmk;gbkey=Gene;gene=gmk;gene_biotype=pseudogene;locus_tag=J4731_10560;pseudo=true
JAGETS010000019.1	Protein Homology	CDS	19897	20502	.	+	0	ID=cds-J4731_10560;Parent=gene-J4731_10560;Note=frameshifted;gbkey=CDS;gene=gmk;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000046969.1;locus_tag=J4731_10560;product=guanylate kinase;pseudo=true;transl_table=11
JAGETS010000019.1	Genbank	pseudogene	20557	20831	.	+	.	ID=gene-J4731_10565;Name=rpoZ;gbkey=Gene;gene=rpoZ;gene_biotype=pseudogene;locus_tag=J4731_10565;pseudo=true
JAGETS010000019.1	Protein Homology	CDS	20557	20831	.	+	0	ID=cds-J4731_10565;Parent=gene-J4731_10565;Note=frameshifted;gbkey=CDS;gene=rpoZ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013511051.1;locus_tag=J4731_10565;product=DNA-directed RNA polymerase subunit omega;pseudo=true;transl_table=11
JAGETS010000019.1	Genbank	pseudogene	20851	22946	.	+	.	ID=gene-J4731_10570;Name=spoT;gbkey=Gene;gene=spoT;gene_biotype=pseudogene;locus_tag=J4731_10570;pseudo=true
JAGETS010000019.1	Protein Homology	CDS	20851	22946	.	+	0	ID=cds-J4731_10570;Parent=gene-J4731_10570;Note=frameshifted;gbkey=CDS;gene=spoT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312552.1;locus_tag=J4731_10570;product=bifunctional GTP diphosphokinase/guanosine-3'%2C5'-bis pyrophosphate 3'-pyrophosphohydrolase;pseudo=true;transl_table=11
JAGETS010000019.1	Genbank	pseudogene	22969	23681	.	+	.	ID=gene-J4731_10575;Name=trmH;gbkey=Gene;gene=trmH;gene_biotype=pseudogene;locus_tag=J4731_10575;pseudo=true
JAGETS010000019.1	Protein Homology	CDS	22969	23681	.	+	0	ID=cds-J4731_10575;Parent=gene-J4731_10575;Note=frameshifted;gbkey=CDS;gene=trmH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007885262.1;locus_tag=J4731_10575;product=tRNA (guanosine(18)-2'-O)-methyltransferase TrmH;pseudo=true;transl_table=11
JAGETS010000019.1	Genbank	pseudogene	23693	25763	.	+	.	ID=gene-J4731_10580;Name=recG;gbkey=Gene;gene=recG;gene_biotype=pseudogene;locus_tag=J4731_10580;pseudo=true
JAGETS010000019.1	Protein Homology	CDS	23693	25763	.	+	0	ID=cds-J4731_10580;Parent=gene-J4731_10580;Note=frameshifted;gbkey=CDS;gene=recG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312554.1;locus_tag=J4731_10580;product=ATP-dependent DNA helicase RecG;pseudo=true;transl_table=11
JAGETS010000019.1	Genbank	pseudogene	25859	27068	.	-	.	ID=gene-J4731_10585;Name=gltS;gbkey=Gene;gene=gltS;gene_biotype=pseudogene;locus_tag=J4731_10585;pseudo=true
JAGETS010000019.1	Protein Homology	CDS	25859	27068	.	-	0	ID=cds-J4731_10585;Parent=gene-J4731_10585;Note=frameshifted;gbkey=CDS;gene=gltS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304777.1;locus_tag=J4731_10585;product=sodium/glutamate symporter;pseudo=true;transl_table=11
JAGETS010000019.1	Genbank	pseudogene	27299	28673	.	+	.	ID=gene-J4731_10590;Name=J4731_10590;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_10590;pseudo=true
JAGETS010000019.1	Protein Homology	CDS	27299	28673	.	+	0	ID=cds-J4731_10590;Parent=gene-J4731_10590;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015699244.1;locus_tag=J4731_10590;product=uracil-xanthine permease;pseudo=true;transl_table=11
JAGETS010000019.1	Genbank	pseudogene	28800	30540	.	+	.	ID=gene-J4731_10595;Name=J4731_10595;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_10595;pseudo=true
JAGETS010000019.1	Protein Homology	CDS	28800	30540	.	+	0	ID=cds-J4731_10595;Parent=gene-J4731_10595;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004262684.1;locus_tag=J4731_10595;product=AsmA family protein;pseudo=true;transl_table=11
JAGETS010000019.1	Genbank	pseudogene	30616	31524	.	-	.	ID=gene-J4731_10600;Name=fabY;gbkey=Gene;gene=fabY;gene_biotype=pseudogene;gene_synonym=yiiD;locus_tag=J4731_10600;pseudo=true
JAGETS010000019.1	Protein Homology	CDS	30616	31524	.	-	0	ID=cds-J4731_10600;Parent=gene-J4731_10600;Note=frameshifted%3B internal stop;gbkey=CDS;gene=fabY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001297068.1;locus_tag=J4731_10600;product=fatty acid biosynthesis protein FabY;pseudo=true;transl_table=11
JAGETS010000019.1	Genbank	pseudogene	31545	31975	.	-	.	ID=gene-J4731_10605;Name=dtd;gbkey=Gene;gene=dtd;gene_biotype=pseudogene;locus_tag=J4731_10605;pseudo=true
JAGETS010000019.1	Protein Homology	CDS	31545	31975	.	-	0	ID=cds-J4731_10605;Parent=gene-J4731_10605;Note=frameshifted;gbkey=CDS;gene=dtd;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008912938.1;locus_tag=J4731_10605;product=D-tyrosyl-tRNA(Tyr) deacylase;pseudo=true;transl_table=11
JAGETS010000019.1	Genbank	pseudogene	32037	32643	.	-	.	ID=gene-J4731_10610;Name=yihX;gbkey=Gene;gene=yihX;gene_biotype=pseudogene;locus_tag=J4731_10610;pseudo=true
JAGETS010000019.1	Protein Homology	CDS	32037	32643	.	-	0	ID=cds-J4731_10610;Parent=gene-J4731_10610;Note=frameshifted;gbkey=CDS;gene=yihX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006659607.1;locus_tag=J4731_10610;product=glucose-1-phosphatase;pseudo=true;transl_table=11
JAGETS010000019.1	Genbank	gene	32990	33265	.	+	.	ID=gene-J4731_10615;Name=J4731_10615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_10615
JAGETS010000019.1	GeneMarkS-2+	CDS	32990	33265	.	+	0	ID=cds-MBO1929166.1;Parent=gene-J4731_10615;Dbxref=NCBI_GP:MBO1929166.1;Name=MBO1929166.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_10615;product=hypothetical protein;protein_id=MBO1929166.1;transl_table=11
JAGETS010000019.1	Genbank	pseudogene	33664	35336	.	-	.	ID=gene-J4731_10620;Name=typA;gbkey=Gene;gene=typA;gene_biotype=pseudogene;locus_tag=J4731_10620;pseudo=true
JAGETS010000019.1	Protein Homology	CDS	33664	35336	.	-	0	ID=cds-J4731_10620;Parent=gene-J4731_10620;Note=frameshifted;gbkey=CDS;gene=typA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014594917.1;locus_tag=J4731_10620;product=translational GTPase TypA;pseudo=true;transl_table=11
JAGETS010000019.1	Genbank	gene	36025	36207	.	+	.	ID=gene-J4731_10625;Name=J4731_10625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_10625
JAGETS010000019.1	GeneMarkS-2+	CDS	36025	36207	.	+	0	ID=cds-MBO1929167.1;Parent=gene-J4731_10625;Dbxref=NCBI_GP:MBO1929167.1;Name=MBO1929167.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_10625;product=hypothetical protein;protein_id=MBO1929167.1;transl_table=11
JAGETS010000019.1	Genbank	pseudogene	36278	36735	.	+	.	ID=gene-J4731_10630;Name=J4731_10630;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_10630;pseudo=true
JAGETS010000019.1	Protein Homology	CDS	36278	36735	.	+	0	ID=cds-J4731_10630;Parent=gene-J4731_10630;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006813782.1;locus_tag=J4731_10630;product=PadR family transcriptional regulator;pseudo=true;transl_table=11
JAGETS010000019.1	Genbank	pseudogene	37100	38477	.	+	.	ID=gene-J4731_10635;Name=glnA;gbkey=Gene;gene=glnA;gene_biotype=pseudogene;locus_tag=J4731_10635;pseudo=true
JAGETS010000019.1	Protein Homology	CDS	37100	38477	.	+	0	ID=cds-J4731_10635;Parent=gene-J4731_10635;Note=frameshifted;gbkey=CDS;gene=glnA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020233234.1;locus_tag=J4731_10635;product=glutamate--ammonia ligase;pseudo=true;transl_table=11
JAGETS010000019.1	Genbank	gene	38634	39689	.	+	.	ID=gene-J4731_10640;Name=glnL;gbkey=Gene;gene=glnL;gene_biotype=protein_coding;locus_tag=J4731_10640
JAGETS010000019.1	Protein Homology	CDS	38634	39689	.	+	0	ID=cds-MBO1929168.1;Parent=gene-J4731_10640;Dbxref=NCBI_GP:MBO1929168.1;Name=MBO1929168.1;gbkey=CDS;gene=glnL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004236581.1;locus_tag=J4731_10640;product=nitrogen regulation protein NR(II);protein_id=MBO1929168.1;transl_table=11
JAGETS010000019.1	Genbank	pseudogene	39692	41155	.	+	.	ID=gene-J4731_10645;Name=glnG;gbkey=Gene;gene=glnG;gene_biotype=pseudogene;locus_tag=J4731_10645;pseudo=true
JAGETS010000019.1	Protein Homology	CDS	39692	41155	.	+	0	ID=cds-J4731_10645;Parent=gene-J4731_10645;Note=frameshifted;gbkey=CDS;gene=glnG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008912949.1;locus_tag=J4731_10645;product=nitrogen regulation protein NR(I);pseudo=true;transl_table=11
JAGETS010000019.1	Genbank	pseudogene	41747	42224	.	+	.	ID=gene-J4731_10650;Name=J4731_10650;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_10650;pseudo=true
JAGETS010000019.1	Protein Homology	CDS	41747	42224	.	+	0	ID=cds-J4731_10650;Parent=gene-J4731_10650;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004957473.1;locus_tag=J4731_10650;product=type 1 fimbrial protein;pseudo=true;transl_table=11
JAGETS010000019.1	Genbank	pseudogene	42305	42944	.	+	.	ID=gene-J4731_10655;Name=J4731_10655;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_10655;pseudo=true
JAGETS010000019.1	Protein Homology	CDS	42305	42944	.	+	0	ID=cds-J4731_10655;Parent=gene-J4731_10655;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004244317.1;locus_tag=J4731_10655;product=molecular chaperone;pseudo=true;transl_table=11
JAGETS010000019.1	Genbank	pseudogene	42970	45480	.	+	.	ID=gene-J4731_10660;Name=J4731_10660;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_10660;pseudo=true
JAGETS010000019.1	Protein Homology	CDS	42970	45480	.	+	0	ID=cds-J4731_10660;Parent=gene-J4731_10660;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006659634.1;locus_tag=J4731_10660;product=fimbrial biogenesis outer membrane usher protein;pseudo=true;transl_table=11
JAGETS010000019.1	Genbank	gene	46075	46425	.	+	.	ID=gene-J4731_10665;Name=J4731_10665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_10665
JAGETS010000019.1	Protein Homology	CDS	46075	46425	.	+	0	ID=cds-MBO1929169.1;Parent=gene-J4731_10665;Dbxref=NCBI_GP:MBO1929169.1;Name=MBO1929169.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012635.1;locus_tag=J4731_10665;product=fimbrial protein;protein_id=MBO1929169.1;transl_table=11
JAGETS010000019.1	Genbank	pseudogene	46486	47000	.	+	.	ID=gene-J4731_10670;Name=J4731_10670;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_10670;pseudo=true
JAGETS010000019.1	Protein Homology	CDS	46486	47000	.	+	0	ID=cds-J4731_10670;Parent=gene-J4731_10670;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006813797.1;locus_tag=J4731_10670;product=type 1 fimbrial protein;pseudo=true;transl_table=11
JAGETS010000019.1	Genbank	pseudogene	47016	47509	.	+	.	ID=gene-J4731_10675;Name=J4731_10675;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_10675;pseudo=true
JAGETS010000019.1	Protein Homology	CDS	47016	47509	.	+	0	ID=cds-J4731_10675;Parent=gene-J4731_10675;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004262753.1;locus_tag=J4731_10675;product=fimbrial protein;pseudo=true;transl_table=11
JAGETS010000019.1	Genbank	pseudogene	47661	47946	.	+	.	ID=gene-J4731_10680;Name=J4731_10680;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_10680;pseudo=true
JAGETS010000019.1	Protein Homology	CDS	47661	47946	.	+	0	ID=cds-J4731_10680;Parent=gene-J4731_10680;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004262762.1;locus_tag=J4731_10680;product=helix-turn-helix transcriptional regulator;pseudo=true;transl_table=11
JAGETS010000019.1	Genbank	pseudogene	47983	48279	.	+	.	ID=gene-J4731_10685;Name=J4731_10685;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_10685;pseudo=true
JAGETS010000019.1	Protein Homology	CDS	47983	48279	.	+	0	ID=cds-J4731_10685;Parent=gene-J4731_10685;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004262765.1;locus_tag=J4731_10685;product=helix-turn-helix transcriptional regulator;pseudo=true;transl_table=11
JAGETS010000019.1	Genbank	pseudogene	48927	49468	.	+	.	ID=gene-J4731_10690;Name=J4731_10690;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_10690;pseudo=true
JAGETS010000019.1	Protein Homology	CDS	48927	49468	.	+	0	ID=cds-J4731_10690;Parent=gene-J4731_10690;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006659623.1;locus_tag=J4731_10690;product=fimbrial protein;pseudo=true;transl_table=11
JAGETS010000019.1	Genbank	pseudogene	49528	50176	.	+	.	ID=gene-J4731_10695;Name=J4731_10695;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_10695;pseudo=true
JAGETS010000019.1	Protein Homology	CDS	49528	50176	.	+	0	ID=cds-J4731_10695;Parent=gene-J4731_10695;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006813787.1;locus_tag=J4731_10695;product=molecular chaperone;pseudo=true;transl_table=11
JAGETS010000019.1	Genbank	pseudogene	50214	52715	.	+	.	ID=gene-J4731_10700;Name=J4731_10700;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_10700;pseudo=true
JAGETS010000019.1	Protein Homology	CDS	50214	52715	.	+	0	ID=cds-J4731_10700;Parent=gene-J4731_10700;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006659634.1;locus_tag=J4731_10700;product=fimbrial biogenesis outer membrane usher protein;pseudo=true;transl_table=11
JAGETS010000019.1	Genbank	pseudogene	52729	53684	.	+	.	ID=gene-J4731_10705;Name=J4731_10705;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_10705;pseudo=true
JAGETS010000019.1	Protein Homology	CDS	52729	53684	.	+	0	ID=cds-J4731_10705;Parent=gene-J4731_10705;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006813796.1;locus_tag=J4731_10705;product=fimbrial protein;pseudo=true;transl_table=11
JAGETS010000019.1	Genbank	pseudogene	53677	54205	.	+	.	ID=gene-J4731_10710;Name=J4731_10710;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_10710;pseudo=true
JAGETS010000019.1	Protein Homology	CDS	53677	54205	.	+	0	ID=cds-J4731_10710;Parent=gene-J4731_10710;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004262744.1;locus_tag=J4731_10710;product=type 1 fimbrial protein;pseudo=true;transl_table=11
JAGETS010000019.1	Genbank	pseudogene	54249	54708	.	+	.	ID=gene-J4731_10715;Name=J4731_10715;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_10715;pseudo=true
JAGETS010000019.1	Protein Homology	CDS	54249	54708	.	+	0	ID=cds-J4731_10715;Parent=gene-J4731_10715;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004262780.1;locus_tag=J4731_10715;product=type 1 fimbrial protein;pseudo=true;transl_table=11
JAGETS010000019.1	Genbank	gene	54752	55015	.	+	.	ID=gene-J4731_10720;Name=J4731_10720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_10720
JAGETS010000019.1	Protein Homology	CDS	54752	55015	.	+	0	ID=cds-MBO1929170.1;Parent=gene-J4731_10720;Dbxref=NCBI_GP:MBO1929170.1;Name=MBO1929170.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006663085.1;locus_tag=J4731_10720;product=helix-turn-helix transcriptional regulator;protein_id=MBO1929170.1;transl_table=11
JAGETS010000019.1	Genbank	pseudogene	55057	56016	.	+	.	ID=gene-J4731_10725;Name=J4731_10725;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_10725;pseudo=true
JAGETS010000019.1	Protein Homology	CDS	55057	56016	.	+	0	ID=cds-J4731_10725;Parent=gene-J4731_10725;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004244309.1;locus_tag=J4731_10725;product=fimbrial protein;pseudo=true;transl_table=11
JAGETS010000019.1	Genbank	gene	56536	56793	.	+	.	ID=gene-J4731_10730;Name=J4731_10730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_10730
JAGETS010000019.1	Protein Homology	CDS	56536	56793	.	+	0	ID=cds-MBO1929171.1;Parent=gene-J4731_10730;Dbxref=NCBI_GP:MBO1929171.1;Name=MBO1929171.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006659640.1;locus_tag=J4731_10730;product=helix-turn-helix transcriptional regulator;protein_id=MBO1929171.1;transl_table=11
JAGETS010000019.1	Genbank	pseudogene	56885	57762	.	-	.	ID=gene-J4731_10735;Name=J4731_10735;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_10735;pseudo=true
JAGETS010000019.1	Protein Homology	CDS	56885	57762	.	-	0	ID=cds-J4731_10735;Parent=gene-J4731_10735;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004262796.1;locus_tag=J4731_10735;product=LysR family transcriptional regulator;pseudo=true;transl_table=11
JAGETS010000019.1	Genbank	pseudogene	57971	59127	.	+	.	ID=gene-J4731_10740;Name=J4731_10740;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_10740;pseudo=true
JAGETS010000019.1	Protein Homology	CDS	57971	59127	.	+	0	ID=cds-J4731_10740;Parent=gene-J4731_10740;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_048321520.1;locus_tag=J4731_10740;product=beta-lactamase;pseudo=true;transl_table=11
JAGETS010000019.1	Genbank	pseudogene	59169	60612	.	-	.	ID=gene-J4731_10745;Name=hemN;gbkey=Gene;gene=hemN;gene_biotype=pseudogene;locus_tag=J4731_10745;pseudo=true
JAGETS010000019.1	Protein Homology	CDS	59169	60612	.	-	0	ID=cds-J4731_10745;Parent=gene-J4731_10745;Note=frameshifted%3B internal stop;gbkey=CDS;gene=hemN;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019080345.1;locus_tag=J4731_10745;product=oxygen-independent coproporphyrinogen III oxidase;pseudo=true;transl_table=11
JAGETS010000019.1	Genbank	pseudogene	60942	61451	.	-	.	ID=gene-J4731_10750;Name=yihI;gbkey=Gene;gene=yihI;gene_biotype=pseudogene;locus_tag=J4731_10750;pseudo=true
JAGETS010000019.1	Protein Homology	CDS	60942	61451	.	-	0	ID=cds-J4731_10750;Parent=gene-J4731_10750;Note=frameshifted%3B internal stop;gbkey=CDS;gene=yihI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006663090.1;locus_tag=J4731_10750;product=Der GTPase-activating protein YihI;pseudo=true;transl_table=11
JAGETS010000019.1	Genbank	pseudogene	61897	63222	.	-	.	ID=gene-J4731_10755;Name=J4731_10755;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_10755;pseudo=true
JAGETS010000019.1	Protein Homology	CDS	61897	63222	.	-	0	ID=cds-J4731_10755;Parent=gene-J4731_10755;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312678.1;locus_tag=J4731_10755;product=NCS2 family permease;pseudo=true;transl_table=11
JAGETS010000019.1	Genbank	pseudogene	63415	64152	.	-	.	ID=gene-J4731_10760;Name=J4731_10760;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_10760;pseudo=true
JAGETS010000019.1	Protein Homology	CDS	63415	64152	.	-	0	ID=cds-J4731_10760;Parent=gene-J4731_10760;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004237990.1;locus_tag=J4731_10760;product=amino acid ABC transporter permease;pseudo=true;transl_table=11
JAGETS010000019.1	Genbank	pseudogene	64156	64890	.	-	.	ID=gene-J4731_10765;Name=J4731_10765;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_10765;pseudo=true
JAGETS010000019.1	Protein Homology	CDS	64156	64890	.	-	0	ID=cds-J4731_10765;Parent=gene-J4731_10765;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011144620.1;locus_tag=J4731_10765;product=amino acid ABC transporter permease;pseudo=true;transl_table=11
JAGETS010000019.1	Genbank	pseudogene	65010	65842	.	-	.	ID=gene-J4731_10770;Name=J4731_10770;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_10770;pseudo=true
JAGETS010000019.1	Protein Homology	CDS	65010	65842	.	-	0	ID=cds-J4731_10770;Parent=gene-J4731_10770;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006663092.1;locus_tag=J4731_10770;product=transporter substrate-binding domain-containing protein;pseudo=true;transl_table=11
JAGETS010000019.1	Genbank	pseudogene	66459	67169	.	-	.	ID=gene-J4731_10775;Name=phoU;gbkey=Gene;gene=phoU;gene_biotype=pseudogene;locus_tag=J4731_10775;pseudo=true
JAGETS010000019.1	Protein Homology	CDS	66459	67169	.	-	0	ID=cds-J4731_10775;Parent=gene-J4731_10775;Note=frameshifted;gbkey=CDS;gene=phoU;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005186726.1;locus_tag=J4731_10775;product=phosphate signaling complex protein PhoU;pseudo=true;transl_table=11
JAGETS010000019.1	Genbank	pseudogene	67183	67864	.	-	.	ID=gene-J4731_10780;Name=pstB;gbkey=Gene;gene=pstB;gene_biotype=pseudogene;locus_tag=J4731_10780;pseudo=true
JAGETS010000019.1	Protein Homology	CDS	67183	67864	.	-	0	ID=cds-J4731_10780;Parent=gene-J4731_10780;Note=frameshifted;gbkey=CDS;gene=pstB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012776359.1;locus_tag=J4731_10780;product=phosphate ABC transporter ATP-binding protein PstB;pseudo=true;transl_table=11
JAGETS010000019.1	Genbank	pseudogene	67975	68761	.	-	.	ID=gene-J4731_10785;Name=pstA;gbkey=Gene;gene=pstA;gene_biotype=pseudogene;locus_tag=J4731_10785;pseudo=true
JAGETS010000019.1	Protein Homology	CDS	67975	68761	.	-	0	ID=cds-J4731_10785;Parent=gene-J4731_10785;Note=frameshifted;gbkey=CDS;gene=pstA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004161214.1;locus_tag=J4731_10785;product=phosphate ABC transporter permease PstA;pseudo=true;transl_table=11
JAGETS010000019.1	Genbank	pseudogene	68840	69787	.	-	.	ID=gene-J4731_10790;Name=pstC;gbkey=Gene;gene=pstC;gene_biotype=pseudogene;locus_tag=J4731_10790;pseudo=true
JAGETS010000019.1	Protein Homology	CDS	68840	69787	.	-	0	ID=cds-J4731_10790;Parent=gene-J4731_10790;Note=frameshifted;gbkey=CDS;gene=pstC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004262847.1;locus_tag=J4731_10790;product=phosphate ABC transporter permease PstC;pseudo=true;transl_table=11
JAGETS010000019.1	Genbank	gene	69702	69899	.	+	.	ID=gene-J4731_10795;Name=J4731_10795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_10795
JAGETS010000019.1	GeneMarkS-2+	CDS	69702	69899	.	+	0	ID=cds-MBO1929172.1;Parent=gene-J4731_10795;Dbxref=NCBI_GP:MBO1929172.1;Name=MBO1929172.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_10795;product=hypothetical protein;protein_id=MBO1929172.1;transl_table=11
JAGETS010000019.1	Genbank	pseudogene	69915	70948	.	-	.	ID=gene-J4731_10800;Name=pstS;gbkey=Gene;gene=pstS;gene_biotype=pseudogene;locus_tag=J4731_10800;pseudo=true
JAGETS010000019.1	Protein Homology	CDS	69915	70948	.	-	0	ID=cds-J4731_10800;Parent=gene-J4731_10800;Note=frameshifted;gbkey=CDS;gene=pstS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462756.1;locus_tag=J4731_10800;product=phosphate ABC transporter substrate-binding protein PstS;pseudo=true;transl_table=11
JAGETS010000019.1	Genbank	pseudogene	71555	72851	.	-	.	ID=gene-J4731_10805;Name=envZ;gbkey=Gene;gene=envZ;gene_biotype=pseudogene;locus_tag=J4731_10805;pseudo=true
JAGETS010000019.1	Protein Homology	CDS	71555	72851	.	-	0	ID=cds-J4731_10805;Parent=gene-J4731_10805;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;gene=envZ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010671559.1;locus_tag=J4731_10805;product=two-component system sensor histidine kinase EnvZ;pseudo=true;transl_table=11
JAGETS010000019.1	Genbank	gene	72823	73113	.	-	.	ID=gene-J4731_10810;Name=J4731_10810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_10810
JAGETS010000019.1	Protein Homology	CDS	72823	73113	.	-	0	ID=cds-MBO1929173.1;Parent=gene-J4731_10810;Dbxref=NCBI_GP:MBO1929173.1;Name=MBO1929173.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001650895.1;locus_tag=J4731_10810;product=winged helix-turn-helix domain-containing protein;protein_id=MBO1929173.1;transl_table=11
JAGETS010000019.1	Genbank	pseudogene	73295	73562	.	-	.	ID=gene-J4731_10815;Name=J4731_10815;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_10815;pseudo=true
JAGETS010000019.1	Protein Homology	CDS	73295	73562	.	-	0	ID=cds-J4731_10815;Parent=gene-J4731_10815;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007778791.1;locus_tag=J4731_10815;product=response regulator;pseudo=true;transl_table=11
JAGETS010000019.1	Genbank	pseudogene	73677	74158	.	-	.	ID=gene-J4731_10820;Name=greB;gbkey=Gene;gene=greB;gene_biotype=pseudogene;locus_tag=J4731_10820;pseudo=true
JAGETS010000019.1	Protein Homology	CDS	73677	74158	.	-	0	ID=cds-J4731_10820;Parent=gene-J4731_10820;Note=frameshifted;gbkey=CDS;gene=greB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006663098.1;locus_tag=J4731_10820;product=transcription elongation factor GreB;pseudo=true;transl_table=11
JAGETS010000019.1	Genbank	pseudogene	74326	76642	.	+	.	ID=gene-J4731_10825;Name=J4731_10825;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_10825;pseudo=true
JAGETS010000019.1	Protein Homology	CDS	74326	76642	.	+	0	ID=cds-J4731_10825;Parent=gene-J4731_10825;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012777790.1;locus_tag=J4731_10825;product=RNA-binding transcriptional accessory protein;pseudo=true;transl_table=11
JAGETS010000019.1	Genbank	pseudogene	76980	77186	.	+	.	ID=gene-J4731_10830;Name=feoA;gbkey=Gene;gene=feoA;gene_biotype=pseudogene;locus_tag=J4731_10830;pseudo=true
JAGETS010000019.1	Protein Homology	CDS	76980	77186	.	+	0	ID=cds-J4731_10830;Parent=gene-J4731_10830;Note=frameshifted;gbkey=CDS;gene=feoA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208918.1;locus_tag=J4731_10830;product=ferrous iron transporter A;pseudo=true;transl_table=11
JAGETS010000019.1	Genbank	pseudogene	77235	79548	.	+	.	ID=gene-J4731_10835;Name=feoB;gbkey=Gene;gene=feoB;gene_biotype=pseudogene;locus_tag=J4731_10835;pseudo=true
JAGETS010000019.1	Protein Homology	CDS	77235	79548	.	+	0	ID=cds-J4731_10835;Parent=gene-J4731_10835;Note=frameshifted;gbkey=CDS;gene=feoB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017827130.1;locus_tag=J4731_10835;product=Fe(2+) transporter permease subunit FeoB;pseudo=true;transl_table=11
JAGETS010000019.1	Genbank	pseudogene	79560	79792	.	+	.	ID=gene-J4731_10840;Name=J4731_10840;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_10840;pseudo=true
JAGETS010000019.1	Protein Homology	CDS	79560	79792	.	+	0	ID=cds-J4731_10840;Parent=gene-J4731_10840;Note=regulatory protein that controls transcription of feoABC genes%3B frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012368552.1;locus_tag=J4731_10840;product=ferrous iron transporter C;pseudo=true;transl_table=11
JAGETS010000019.1	Genbank	pseudogene	79821	80606	.	-	.	ID=gene-J4731_10845;Name=bioH;gbkey=Gene;gene=bioH;gene_biotype=pseudogene;locus_tag=J4731_10845;pseudo=true
JAGETS010000019.1	Protein Homology	CDS	79821	80606	.	-	0	ID=cds-J4731_10845;Parent=gene-J4731_10845;Note=frameshifted;gbkey=CDS;gene=bioH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006663104.1;locus_tag=J4731_10845;product=pimeloyl-ACP methyl ester esterase BioH;pseudo=true;transl_table=11
JAGETS010000019.1	Genbank	pseudogene	80874	81329	.	+	.	ID=gene-J4731_10850;Name=J4731_10850;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_10850;pseudo=true
JAGETS010000019.1	Protein Homology	CDS	80874	81329	.	+	0	ID=cds-J4731_10850;Parent=gene-J4731_10850;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004262877.1;locus_tag=J4731_10850;product=phosphoribosyltransferase;pseudo=true;transl_table=11
JAGETS010000019.1	Genbank	pseudogene	81391	81967	.	+	.	ID=gene-J4731_10855;Name=nfuA;gbkey=Gene;gene=nfuA;gene_biotype=pseudogene;locus_tag=J4731_10855;pseudo=true
JAGETS010000019.1	Protein Homology	CDS	81391	81967	.	+	0	ID=cds-J4731_10855;Parent=gene-J4731_10855;Note=frameshifted;gbkey=CDS;gene=nfuA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016942932.1;locus_tag=J4731_10855;product=Fe-S biogenesis protein NfuA;pseudo=true;transl_table=11
JAGETS010000019.1	Genbank	pseudogene	82055	82380	.	+	.	ID=gene-J4731_10860;Name=glpE;gbkey=Gene;gene=glpE;gene_biotype=pseudogene;locus_tag=J4731_10860;pseudo=true
JAGETS010000019.1	Protein Homology	CDS	82055	82380	.	+	0	ID=cds-J4731_10860;Parent=gene-J4731_10860;Note=frameshifted;gbkey=CDS;gene=glpE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011144598.1;locus_tag=J4731_10860;product=thiosulfate sulfurtransferase GlpE;pseudo=true;transl_table=11
JAGETS010000019.1	Genbank	pseudogene	82392	83231	.	+	.	ID=gene-J4731_10865;Name=glpG;gbkey=Gene;gene=glpG;gene_biotype=pseudogene;locus_tag=J4731_10865;pseudo=true
JAGETS010000019.1	Protein Homology	CDS	82392	83231	.	+	0	ID=cds-J4731_10865;Parent=gene-J4731_10865;Note=frameshifted;gbkey=CDS;gene=glpG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006659666.1;locus_tag=J4731_10865;product=rhomboid family intramembrane serine protease GlpG;pseudo=true;transl_table=11
JAGETS010000019.1	Genbank	pseudogene	83260	84013	.	+	.	ID=gene-J4731_10870;Name=J4731_10870;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_10870;pseudo=true
JAGETS010000019.1	Protein Homology	CDS	83260	84013	.	+	0	ID=cds-J4731_10870;Parent=gene-J4731_10870;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462425.1;locus_tag=J4731_10870;product=DeoR/GlpR family transcriptional regulator;pseudo=true;transl_table=11
JAGETS010000019.1	Genbank	pseudogene	84297	85823	.	+	.	ID=gene-J4731_10875;Name=glpD;gbkey=Gene;gene=glpD;gene_biotype=pseudogene;locus_tag=J4731_10875;pseudo=true
JAGETS010000019.1	Protein Homology	CDS	84297	85823	.	+	0	ID=cds-J4731_10875;Parent=gene-J4731_10875;Note=frameshifted%3B internal stop;gbkey=CDS;gene=glpD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004699669.1;locus_tag=J4731_10875;product=glycerol-3-phosphate dehydrogenase;pseudo=true;transl_table=11
JAGETS010000019.1	Genbank	pseudogene	86139	87694	.	+	.	ID=gene-J4731_10880;Name=J4731_10880;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_10880;pseudo=true
JAGETS010000019.1	Protein Homology	CDS	86139	87694	.	+	0	ID=cds-J4731_10880;Parent=gene-J4731_10880;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004262887.1;locus_tag=J4731_10880;product=ABC-F family ATP-binding cassette domain-containing protein;pseudo=true;transl_table=11
JAGETS010000019.1	Genbank	gene	87844	88125	.	-	.	ID=gene-J4731_10885;Name=J4731_10885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_10885
JAGETS010000019.1	GeneMarkS-2+	CDS	87844	88125	.	-	0	ID=cds-MBO1929174.1;Parent=gene-J4731_10885;Dbxref=NCBI_GP:MBO1929174.1;Name=MBO1929174.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_10885;product=hypothetical protein;protein_id=MBO1929174.1;transl_table=11
JAGETS010000019.1	Genbank	pseudogene	88265	88620	.	-	.	ID=gene-J4731_10890;Name=J4731_10890;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_10890;pseudo=true
JAGETS010000019.1	Protein Homology	CDS	88265	88620	.	-	0	ID=cds-J4731_10890;Parent=gene-J4731_10890;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006663110.1;locus_tag=J4731_10890;product=DUF488 domain-containing protein;pseudo=true;transl_table=11
JAGETS010000019.1	Genbank	pseudogene	88661	89070	.	-	.	ID=gene-J4731_10895;Name=J4731_10895;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_10895;pseudo=true
JAGETS010000019.1	Protein Homology	CDS	88661	89070	.	-	0	ID=cds-J4731_10895;Parent=gene-J4731_10895;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006659672.1;locus_tag=J4731_10895;product=DUF2569 domain-containing protein;pseudo=true;transl_table=11
JAGETS010000019.1	Genbank	pseudogene	89368	90207	.	+	.	ID=gene-J4731_10900;Name=J4731_10900;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_10900;pseudo=true
JAGETS010000019.1	Protein Homology	CDS	89368	90207	.	+	0	ID=cds-J4731_10900;Parent=gene-J4731_10900;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004923520.1;locus_tag=J4731_10900;product=DNA-3-methyladenine glycosylase 2 family protein;pseudo=true;transl_table=11
JAGETS010000019.1	Genbank	pseudogene	90271	91967	.	-	.	ID=gene-J4731_10905;Name=poxB;gbkey=Gene;gene=poxB;gene_biotype=pseudogene;locus_tag=J4731_10905;pseudo=true
JAGETS010000019.1	Protein Homology	CDS	90271	91967	.	-	0	ID=cds-J4731_10905;Parent=gene-J4731_10905;Note=frameshifted%3B internal stop;gbkey=CDS;gene=poxB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017347009.1;locus_tag=J4731_10905;product=ubiquinone-dependent pyruvate dehydrogenase;pseudo=true;transl_table=11
JAGETS010000019.1	Genbank	pseudogene	92789	94250	.	+	.	ID=gene-J4731_10910;Name=proP;gbkey=Gene;gene=proP;gene_biotype=pseudogene;locus_tag=J4731_10910;pseudo=true
JAGETS010000019.1	Protein Homology	CDS	92789	94250	.	+	0	ID=cds-J4731_10910;Parent=gene-J4731_10910;Note=frameshifted;gbkey=CDS;gene=proP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016928235.1;locus_tag=J4731_10910;product=glycine betaine/L-proline transporter ProP;pseudo=true;transl_table=11
JAGETS010000019.1	Genbank	pseudogene	94405	95838	.	+	.	ID=gene-J4731_10915;Name=phrB;gbkey=Gene;gene=phrB;gene_biotype=pseudogene;locus_tag=J4731_10915;pseudo=true
JAGETS010000019.1	Protein Homology	CDS	94405	95838	.	+	0	ID=cds-J4731_10915;Parent=gene-J4731_10915;Note=frameshifted;gbkey=CDS;gene=phrB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004262896.1;locus_tag=J4731_10915;product=deoxyribodipyrimidine photo-lyase;pseudo=true;transl_table=11
JAGETS010000019.1	Genbank	pseudogene	95918	96228	.	+	.	ID=gene-J4731_10920;Name=J4731_10920;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_10920;pseudo=true
JAGETS010000019.1	Protein Homology	CDS	95918	96228	.	+	0	ID=cds-J4731_10920;Parent=gene-J4731_10920;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006663117.1;locus_tag=J4731_10920;product=monooxygenase;pseudo=true;transl_table=11
JAGETS010000019.1	Genbank	pseudogene	96263	97018	.	-	.	ID=gene-J4731_10925;Name=J4731_10925;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_10925;pseudo=true
JAGETS010000019.1	Protein Homology	CDS	96263	97018	.	-	0	ID=cds-J4731_10925;Parent=gene-J4731_10925;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004262900.1;locus_tag=J4731_10925;product=class I SAM-dependent methyltransferase;pseudo=true;transl_table=11
JAGETS010000019.1	Genbank	pseudogene	97117	99170	.	-	.	ID=gene-J4731_10930;Name=paaZ;gbkey=Gene;gene=paaZ;gene_biotype=pseudogene;locus_tag=J4731_10930;pseudo=true
JAGETS010000019.1	Protein Homology	CDS	97117	99170	.	-	0	ID=cds-J4731_10930;Parent=gene-J4731_10930;Note=frameshifted;gbkey=CDS;gene=paaZ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010846186.1;locus_tag=J4731_10930;product=phenylacetic acid degradation bifunctional protein PaaZ;pseudo=true;transl_table=11
JAGETS010000019.1	Genbank	pseudogene	99561	100419	.	+	.	ID=gene-J4731_10935;Name=paaA;gbkey=Gene;gene=paaA;gene_biotype=pseudogene;locus_tag=J4731_10935;pseudo=true
JAGETS010000019.1	Protein Homology	CDS	99561	100419	.	+	0	ID=cds-J4731_10935;Parent=gene-J4731_10935;Note=frameshifted%3B internal stop;gbkey=CDS;gene=paaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415906.1;locus_tag=J4731_10935;product=1%2C2-phenylacetyl-CoA epoxidase subunit A;pseudo=true;transl_table=11
JAGETS010000019.1	Genbank	pseudogene	100441	100716	.	+	.	ID=gene-J4731_10940;Name=paaB;gbkey=Gene;gene=paaB;gene_biotype=pseudogene;locus_tag=J4731_10940;pseudo=true
JAGETS010000019.1	Protein Homology	CDS	100441	100716	.	+	0	ID=cds-J4731_10940;Parent=gene-J4731_10940;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;gene=paaB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226670.1;locus_tag=J4731_10940;product=1%2C2-phenylacetyl-CoA epoxidase subunit B;pseudo=true;transl_table=11
JAGETS010000019.1	Genbank	pseudogene	100735	101482	.	+	.	ID=gene-J4731_10945;Name=paaC;gbkey=Gene;gene=paaC;gene_biotype=pseudogene;locus_tag=J4731_10945;pseudo=true
JAGETS010000019.1	Protein Homology	CDS	100735	101482	.	+	0	ID=cds-J4731_10945;Parent=gene-J4731_10945;Note=frameshifted;gbkey=CDS;gene=paaC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004923476.1;locus_tag=J4731_10945;product=phenylacetate-CoA oxygenase subunit PaaC;pseudo=true;transl_table=11
JAGETS010000019.1	Genbank	pseudogene	101487	101993	.	+	.	ID=gene-J4731_10950;Name=paaJ;gbkey=Gene;gene=paaJ;gene_biotype=pseudogene;locus_tag=J4731_10950;pseudo=true
JAGETS010000019.1	Protein Homology	CDS	101487	101993	.	+	0	ID=cds-J4731_10950;Parent=gene-J4731_10950;Note=frameshifted;gbkey=CDS;gene=paaJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014657032.1;locus_tag=J4731_10950;product=phenylacetate-CoA oxygenase subunit PaaJ;pseudo=true;transl_table=11
JAGETS010000019.1	Genbank	pseudogene	102004	103052	.	+	.	ID=gene-J4731_10955;Name=paaK;gbkey=Gene;gene=paaK;gene_biotype=pseudogene;locus_tag=J4731_10955;pseudo=true
JAGETS010000019.1	Protein Homology	CDS	102004	103052	.	+	0	ID=cds-J4731_10955;Parent=gene-J4731_10955;Note=frameshifted;gbkey=CDS;gene=paaK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012145797.1;locus_tag=J4731_10955;product=phenylacetate-CoA oxygenase/reductase subunit PaaK;pseudo=true;transl_table=11
JAGETS010000019.1	Genbank	pseudogene	103061	103845	.	+	.	ID=gene-J4731_10960;Name=J4731_10960;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_10960;pseudo=true
JAGETS010000019.1	Protein Homology	CDS	103061	103845	.	+	0	ID=cds-J4731_10960;Parent=gene-J4731_10960;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006319278.1;locus_tag=J4731_10960;product=2%2C3-dehydroadipyl-CoA hydratase;pseudo=true;transl_table=11
JAGETS010000019.1	Genbank	pseudogene	103835	104623	.	+	.	ID=gene-J4731_10965;Name=paaB;gbkey=Gene;gene=paaB;gene_biotype=pseudogene;locus_tag=J4731_10965;pseudo=true
JAGETS010000019.1	Protein Homology	CDS	103835	104623	.	+	0	ID=cds-J4731_10965;Parent=gene-J4731_10965;Note=frameshifted;gbkey=CDS;gene=paaB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004262922.1;locus_tag=J4731_10965;product=2-(1%2C2-epoxy-1%2C2-dihydrophenyl)acetyl-CoA isomerase;pseudo=true;transl_table=11
JAGETS010000019.1	Genbank	pseudogene	104626	106166	.	+	.	ID=gene-J4731_10970;Name=J4731_10970;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_10970;pseudo=true
JAGETS010000019.1	Protein Homology	CDS	104626	106166	.	+	0	ID=cds-J4731_10970;Parent=gene-J4731_10970;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004262924.1;locus_tag=J4731_10970;product=3-hydroxyacyl-CoA dehydrogenase;pseudo=true;transl_table=11
JAGETS010000019.1	Genbank	pseudogene	106163	106584	.	+	.	ID=gene-J4731_10975;Name=paaI;gbkey=Gene;gene=paaI;gene_biotype=pseudogene;locus_tag=J4731_10975;pseudo=true
JAGETS010000019.1	Protein Homology	CDS	106163	106584	.	+	0	ID=cds-J4731_10975;Parent=gene-J4731_10975;Note=frameshifted;gbkey=CDS;gene=paaI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008812651.1;locus_tag=J4731_10975;product=hydroxyphenylacetyl-CoA thioesterase PaaI;pseudo=true;transl_table=11
JAGETS010000019.1	Genbank	pseudogene	106598	107188	.	+	.	ID=gene-J4731_10980;Name=J4731_10980;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_10980;pseudo=true
JAGETS010000019.1	Protein Homology	CDS	106598	107188	.	+	0	ID=cds-J4731_10980;Parent=gene-J4731_10980;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001378064.1;locus_tag=J4731_10980;product=beta-ketoadipyl CoA thiolase;pseudo=true;transl_table=11
JAGETS010000019.1	Genbank	gene	107207	107458	.	+	.	ID=gene-J4731_10985;Name=J4731_10985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_10985
JAGETS010000019.1	Protein Homology	CDS	107207	107458	.	+	0	ID=cds-MBO1929175.1;Parent=gene-J4731_10985;Dbxref=NCBI_GP:MBO1929175.1;Name=MBO1929175.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012336.1;locus_tag=J4731_10985;product=hypothetical protein;protein_id=MBO1929175.1;transl_table=11
JAGETS010000019.1	Genbank	gene	107507	107662	.	+	.	ID=gene-J4731_10990;Name=J4731_10990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_10990
JAGETS010000019.1	Protein Homology	CDS	107507	107662	.	+	0	ID=cds-MBO1929176.1;Parent=gene-J4731_10990;Dbxref=NCBI_GP:MBO1929176.1;Name=MBO1929176.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014820.1;locus_tag=J4731_10990;product=hypothetical protein;protein_id=MBO1929176.1;transl_table=11
JAGETS010000019.1	Genbank	gene	107655	107777	.	+	.	ID=gene-J4731_10995;Name=J4731_10995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_10995
JAGETS010000019.1	Protein Homology	CDS	107655	107777	.	+	0	ID=cds-MBO1929177.1;Parent=gene-J4731_10995;Dbxref=NCBI_GP:MBO1929177.1;Name=MBO1929177.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014820.1;locus_tag=J4731_10995;product=hypothetical protein;protein_id=MBO1929177.1;transl_table=11
JAGETS010000019.1	Genbank	pseudogene	107896	109196	.	+	.	ID=gene-J4731_11000;Name=paaF;gbkey=Gene;gene=paaF;gene_biotype=pseudogene;locus_tag=J4731_11000;pseudo=true
JAGETS010000019.1	Protein Homology	CDS	107896	109196	.	+	0	ID=cds-J4731_11000;Parent=gene-J4731_11000;Note=frameshifted;gbkey=CDS;gene=paaF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014657036.1;locus_tag=J4731_11000;product=phenylacetate--CoA ligase;pseudo=true;transl_table=11
JAGETS010000019.1	Genbank	pseudogene	109347	110278	.	+	.	ID=gene-J4731_11005;Name=paaX;gbkey=Gene;gene=paaX;gene_biotype=pseudogene;locus_tag=J4731_11005;pseudo=true
JAGETS010000019.1	Protein Homology	CDS	109347	110278	.	+	0	ID=cds-J4731_11005;Parent=gene-J4731_11005;Note=frameshifted%3B internal stop;gbkey=CDS;gene=paaX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008913029.1;locus_tag=J4731_11005;product=phenylacetic acid degradation operon negative regulatory protein PaaX;pseudo=true;transl_table=11
JAGETS010000019.1	Genbank	pseudogene	110300	110892	.	+	.	ID=gene-J4731_11010;Name=paaY;gbkey=Gene;gene=paaY;gene_biotype=pseudogene;locus_tag=J4731_11010;pseudo=true
JAGETS010000019.1	Protein Homology	CDS	110300	110892	.	+	0	ID=cds-J4731_11010;Parent=gene-J4731_11010;Note=frameshifted;gbkey=CDS;gene=paaY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006659697.1;locus_tag=J4731_11010;product=phenylacetic acid degradation protein PaaY;pseudo=true;transl_table=11
JAGETS010000019.1	Genbank	pseudogene	110930	112438	.	-	.	ID=gene-J4731_11015;Name=J4731_11015;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_11015;pseudo=true
JAGETS010000019.1	Protein Homology	CDS	110930	112438	.	-	0	ID=cds-J4731_11015;Parent=gene-J4731_11015;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004262939.1;locus_tag=J4731_11015;product=DHA2 family efflux MFS transporter permease subunit;pseudo=true;transl_table=11
JAGETS010000019.1	Genbank	pseudogene	112455	113531	.	-	.	ID=gene-J4731_11020;Name=J4731_11020;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_11020;pseudo=true
JAGETS010000019.1	Protein Homology	CDS	112455	113531	.	-	0	ID=cds-J4731_11020;Parent=gene-J4731_11020;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000435167.1;locus_tag=J4731_11020;product=EmrA/EmrK family multidrug efflux transporter periplasmic adaptor subunit;pseudo=true;transl_table=11
JAGETS010000019.1	Genbank	pseudogene	114459	116494	.	+	.	ID=gene-J4731_11025;Name=J4731_11025;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_11025;pseudo=true
JAGETS010000019.1	Protein Homology	CDS	114459	116494	.	+	0	ID=cds-J4731_11025;Parent=gene-J4731_11025;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001534707.1;locus_tag=J4731_11025;product=TonB-dependent receptor;pseudo=true;transl_table=11
JAGETS010000019.1	Genbank	pseudogene	116556	117406	.	+	.	ID=gene-J4731_11030;Name=J4731_11030;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_11030;pseudo=true
JAGETS010000019.1	Protein Homology	CDS	116556	117406	.	+	0	ID=cds-J4731_11030;Parent=gene-J4731_11030;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014657070.1;locus_tag=J4731_11030;product=alpha/beta hydrolase;pseudo=true;transl_table=11
JAGETS010000019.1	Genbank	pseudogene	117447	118339	.	-	.	ID=gene-J4731_11035;Name=J4731_11035;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_11035;pseudo=true
JAGETS010000019.1	Protein Homology	CDS	117447	118339	.	-	0	ID=cds-J4731_11035;Parent=gene-J4731_11035;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001513527.1;locus_tag=J4731_11035;product=LysR family transcriptional regulator;pseudo=true;transl_table=11
JAGETS010000019.1	Genbank	pseudogene	118933	119482	.	+	.	ID=gene-J4731_11040;Name=J4731_11040;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_11040;pseudo=true
JAGETS010000019.1	Protein Homology	CDS	118933	119482	.	+	0	ID=cds-J4731_11040;Parent=gene-J4731_11040;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015704656.1;locus_tag=J4731_11040;product=ankyrin repeat domain-containing protein;pseudo=true;transl_table=11
JAGETS010000019.1	Genbank	pseudogene	119658	120480	.	+	.	ID=gene-J4731_11045;Name=J4731_11045;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_11045;pseudo=true
JAGETS010000019.1	Protein Homology	CDS	119658	120480	.	+	0	ID=cds-J4731_11045;Parent=gene-J4731_11045;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006661211.1;locus_tag=J4731_11045;product=DUF2877 domain-containing protein;pseudo=true;transl_table=11
JAGETS010000019.1	Genbank	pseudogene	120523	122009	.	+	.	ID=gene-J4731_11050;Name=fdrA;gbkey=Gene;gene=fdrA;gene_biotype=pseudogene;locus_tag=J4731_11050;pseudo=true
JAGETS010000019.1	Protein Homology	CDS	120523	122009	.	+	0	ID=cds-J4731_11050;Parent=gene-J4731_11050;Note=frameshifted;gbkey=CDS;gene=fdrA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017347296.1;locus_tag=J4731_11050;product=acyl-CoA synthetase FdrA;pseudo=true;transl_table=11
JAGETS010000019.1	Genbank	pseudogene	122006	123428	.	+	.	ID=gene-J4731_11055;Name=J4731_11055;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_11055;pseudo=true
JAGETS010000019.1	Protein Homology	CDS	122006	123428	.	+	0	ID=cds-J4731_11055;Parent=gene-J4731_11055;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414855.1;locus_tag=J4731_11055;product=DUF1116 domain-containing protein;pseudo=true;transl_table=11
JAGETS010000019.1	Genbank	pseudogene	123657	125217	.	+	.	ID=gene-J4731_11060;Name=J4731_11060;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_11060;pseudo=true
JAGETS010000019.1	Protein Homology	CDS	123657	125217	.	+	0	ID=cds-J4731_11060;Parent=gene-J4731_11060;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008913110.1;locus_tag=J4731_11060;product=xanthine permease;pseudo=true;transl_table=11
JAGETS010000019.1	Genbank	pseudogene	125294	126240	.	+	.	ID=gene-J4731_11065;Name=J4731_11065;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_11065;pseudo=true
JAGETS010000019.1	Protein Homology	CDS	125294	126240	.	+	0	ID=cds-J4731_11065;Parent=gene-J4731_11065;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006661215.1;locus_tag=J4731_11065;product=carbamate kinase family protein;pseudo=true;transl_table=11
JAGETS010000019.1	Genbank	pseudogene	126381	127762	.	+	.	ID=gene-J4731_11070;Name=J4731_11070;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_11070;pseudo=true
JAGETS010000019.1	Protein Homology	CDS	126381	127762	.	+	0	ID=cds-J4731_11070;Parent=gene-J4731_11070;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004262970.1;locus_tag=J4731_11070;product=amidohydrolase family protein;pseudo=true;transl_table=11
JAGETS010000019.1	Genbank	pseudogene	127816	128772	.	-	.	ID=gene-J4731_11075;Name=J4731_11075;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_11075;pseudo=true
JAGETS010000019.1	Protein Homology	CDS	127816	128772	.	-	0	ID=cds-J4731_11075;Parent=gene-J4731_11075;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006328363.1;locus_tag=J4731_11075;product=nucleoside hydrolase;pseudo=true;transl_table=11
JAGETS010000019.1	Genbank	pseudogene	128796	129784	.	-	.	ID=gene-J4731_11080;Name=J4731_11080;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_11080;pseudo=true
JAGETS010000019.1	Protein Homology	CDS	128796	129784	.	-	0	ID=cds-J4731_11080;Parent=gene-J4731_11080;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000194408.1;locus_tag=J4731_11080;product=LacI family DNA-binding transcriptional regulator;pseudo=true;transl_table=11
JAGETS010000019.1	Genbank	pseudogene	129861	131239	.	-	.	ID=gene-J4731_11085;Name=J4731_11085;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_11085;pseudo=true
JAGETS010000019.1	Protein Homology	CDS	129861	131239	.	-	0	ID=cds-J4731_11085;Parent=gene-J4731_11085;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005173889.1;locus_tag=J4731_11085;product=MHS family MFS transporter;pseudo=true;transl_table=11
JAGETS010000019.1	Genbank	gene	131469	131720	.	-	.	ID=gene-J4731_11090;Name=J4731_11090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_11090
JAGETS010000019.1	Protein Homology	CDS	131469	131720	.	-	0	ID=cds-MBO1929178.1;Parent=gene-J4731_11090;Dbxref=NCBI_GP:MBO1929178.1;Name=MBO1929178.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004926263.1;locus_tag=J4731_11090;product=acyl carrier protein;protein_id=MBO1929178.1;transl_table=11
JAGETS010000019.1	Genbank	gene	131925	132182	.	-	.	ID=gene-J4731_11095;Name=J4731_11095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_11095
JAGETS010000019.1	GeneMarkS-2+	CDS	131925	132182	.	-	0	ID=cds-MBO1929179.1;Parent=gene-J4731_11095;Dbxref=NCBI_GP:MBO1929179.1;Name=MBO1929179.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_11095;product=hypothetical protein;protein_id=MBO1929179.1;transl_table=11
JAGETS010000019.1	Genbank	gene	132203	132355	.	-	.	ID=gene-J4731_11100;Name=J4731_11100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_11100
JAGETS010000019.1	GeneMarkS-2+	CDS	132203	132355	.	-	0	ID=cds-MBO1929180.1;Parent=gene-J4731_11100;Dbxref=NCBI_GP:MBO1929180.1;Name=MBO1929180.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_11100;product=hypothetical protein;protein_id=MBO1929180.1;transl_table=11
JAGETS010000019.1	Genbank	gene	133400	133543	.	-	.	ID=gene-J4731_11105;Name=J4731_11105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_11105
JAGETS010000019.1	GeneMarkS-2+	CDS	133400	133543	.	-	0	ID=cds-MBO1929181.1;Parent=gene-J4731_11105;Dbxref=NCBI_GP:MBO1929181.1;Name=MBO1929181.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_11105;product=hypothetical protein;protein_id=MBO1929181.1;transl_table=11
JAGETS010000019.1	Genbank	gene	133755	134351	.	-	.	ID=gene-J4731_11110;Name=J4731_11110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_11110
JAGETS010000019.1	GeneMarkS-2+	CDS	133755	134351	.	-	0	ID=cds-MBO1929182.1;Parent=gene-J4731_11110;Dbxref=NCBI_GP:MBO1929182.1;Name=MBO1929182.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_11110;product=hypothetical protein;protein_id=MBO1929182.1;transl_table=11
JAGETS010000019.1	Genbank	gene	134378	134770	.	-	.	ID=gene-J4731_11115;Name=J4731_11115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_11115
JAGETS010000019.1	GeneMarkS-2+	CDS	134378	134770	.	-	0	ID=cds-MBO1929183.1;Parent=gene-J4731_11115;Dbxref=NCBI_GP:MBO1929183.1;Name=MBO1929183.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_11115;product=hypothetical protein;protein_id=MBO1929183.1;transl_table=11
JAGETS010000019.1	Genbank	gene	134898	135254	.	-	.	ID=gene-J4731_11120;Name=J4731_11120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_11120
JAGETS010000019.1	GeneMarkS-2+	CDS	134898	135254	.	-	0	ID=cds-MBO1929184.1;Parent=gene-J4731_11120;Dbxref=NCBI_GP:MBO1929184.1;Name=MBO1929184.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_11120;product=hypothetical protein;protein_id=MBO1929184.1;transl_table=11
JAGETS010000019.1	Genbank	pseudogene	135546	137570	.	-	.	ID=gene-J4731_11125;Name=sctE;gbkey=Gene;gene=sctE;gene_biotype=pseudogene;locus_tag=J4731_11125;pseudo=true
JAGETS010000019.1	Protein Homology	CDS	135546	137570	.	-	0	ID=cds-J4731_11125;Parent=gene-J4731_11125;Note=frameshifted%3B internal stop;gbkey=CDS;gene=sctE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006663135.1;locus_tag=J4731_11125;product=type III secretion system translocon subunit SctE;pseudo=true;transl_table=11
JAGETS010000019.1	Genbank	pseudogene	137583	138079	.	-	.	ID=gene-J4731_11130;Name=sicA;gbkey=Gene;gene=sicA;gene_biotype=pseudogene;locus_tag=J4731_11130;pseudo=true
JAGETS010000019.1	Protein Homology	CDS	137583	138079	.	-	0	ID=cds-J4731_11130;Parent=gene-J4731_11130;Note=frameshifted;gbkey=CDS;gene=sicA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004926257.1;locus_tag=J4731_11130;product=type III secretion system translocator chaperone SicA;pseudo=true;transl_table=11
JAGETS010000019.1	Genbank	pseudogene	138121	139280	.	-	.	ID=gene-J4731_11135;Name=J4731_11135;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_11135;pseudo=true
JAGETS010000019.1	Protein Homology	CDS	138121	139280	.	-	0	ID=cds-J4731_11135;Parent=gene-J4731_11135;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011817130.1;locus_tag=J4731_11135;product=EscU/YscU/HrcU family type III secretion system export apparatus switch protein;pseudo=true;transl_table=11
JAGETS010000019.1	Genbank	pseudogene	139300	139934	.	-	.	ID=gene-J4731_11140;Name=J4731_11140;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_11140;pseudo=true
JAGETS010000019.1	Protein Homology	CDS	139300	139934	.	-	2	ID=cds-J4731_11140;Parent=gene-J4731_11140;Note=frameshifted%3B internal stop%3B incomplete%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004262996.1;locus_tag=J4731_11140;product=flagellar biosynthetic protein FliR;pseudo=true;transl_table=11
##sequence-region JAGETS010000002.1 1 41063
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=587
JAGETS010000002.1	Genbank	region	1	41063	.	+	.	ID=JAGETS010000002.1:1..41063;Dbxref=taxon:587;collected-by=NHLS;collection-date=2018;country=South Africa: Pretoria;gbkey=Src;isolation-source=stool;lat-lon=25.7479 S 28.2293 E;mol_type=genomic DNA;nat-host=porcine;strain=SG003
JAGETS010000002.1	Genbank	pseudogene	1	1188	.	-	.	ID=gene-J4731_01315;Name=J4731_01315;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_01315;pseudo=true
JAGETS010000002.1	Protein Homology	CDS	1	1188	.	-	0	ID=cds-J4731_01315;Parent=gene-J4731_01315;Note=frameshifted%3B incomplete%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012088182.1;locus_tag=J4731_01315;product=IS66 family transposase;pseudo=true;transl_table=11
JAGETS010000002.1	Genbank	gene	1322	1570	.	-	.	ID=gene-J4731_01320;Name=tnpB;gbkey=Gene;gene=tnpB;gene_biotype=protein_coding;locus_tag=J4731_01320
JAGETS010000002.1	Protein Homology	CDS	1322	1570	.	-	0	ID=cds-MBO1928602.1;Parent=gene-J4731_01320;Dbxref=NCBI_GP:MBO1928602.1;Name=MBO1928602.1;gbkey=CDS;gene=tnpB;inference=COORDINATES: protein motif:HMM:NF017528.1;locus_tag=J4731_01320;product=IS66 family insertion sequence element accessory protein TnpB;protein_id=MBO1928602.1;transl_table=11
JAGETS010000002.1	Genbank	gene	1612	1908	.	-	.	ID=gene-J4731_01325;Name=J4731_01325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_01325
JAGETS010000002.1	Protein Homology	CDS	1612	1908	.	-	0	ID=cds-MBO1928603.1;Parent=gene-J4731_01325;Dbxref=NCBI_GP:MBO1928603.1;Name=MBO1928603.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013785984.1;locus_tag=J4731_01325;product=IS66 family insertion sequence hypothetical protein;protein_id=MBO1928603.1;transl_table=11
JAGETS010000002.1	Genbank	gene	2195	2644	.	-	.	ID=gene-J4731_01330;Name=J4731_01330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_01330
JAGETS010000002.1	GeneMarkS-2+	CDS	2195	2644	.	-	0	ID=cds-MBO1928604.1;Parent=gene-J4731_01330;Dbxref=NCBI_GP:MBO1928604.1;Name=MBO1928604.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_01330;product=hypothetical protein;protein_id=MBO1928604.1;transl_table=11
JAGETS010000002.1	Genbank	pseudogene	3224	3914	.	-	.	ID=gene-J4731_01335;Name=J4731_01335;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_01335;pseudo=true
JAGETS010000002.1	Protein Homology	CDS	3224	3914	.	-	0	ID=cds-J4731_01335;Parent=gene-J4731_01335;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611130.1;locus_tag=J4731_01335;product=IS5 family transposase;pseudo=true;transl_table=11
JAGETS010000002.1	Genbank	gene	4029	4238	.	-	.	ID=gene-J4731_01340;Name=J4731_01340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_01340
JAGETS010000002.1	GeneMarkS-2+	CDS	4029	4238	.	-	0	ID=cds-MBO1928605.1;Parent=gene-J4731_01340;Dbxref=NCBI_GP:MBO1928605.1;Name=MBO1928605.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_01340;product=hypothetical protein;protein_id=MBO1928605.1;transl_table=11
JAGETS010000002.1	Genbank	pseudogene	4285	4937	.	-	.	ID=gene-J4731_01345;Name=J4731_01345;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_01345;pseudo=true
JAGETS010000002.1	Protein Homology	CDS	4285	4937	.	-	0	ID=cds-J4731_01345;Parent=gene-J4731_01345;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248742.1;locus_tag=J4731_01345;product=IS1595 family transposase;pseudo=true;transl_table=11
JAGETS010000002.1	Genbank	pseudogene	4983	5997	.	-	.	ID=gene-J4731_01350;Name=galE;gbkey=Gene;gene=galE;gene_biotype=pseudogene;locus_tag=J4731_01350;pseudo=true
JAGETS010000002.1	Protein Homology	CDS	4983	5997	.	-	0	ID=cds-J4731_01350;Parent=gene-J4731_01350;Note=frameshifted%3B internal stop;gbkey=CDS;gene=galE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014657217.1;locus_tag=J4731_01350;product=UDP-glucose 4-epimerase GalE;pseudo=true;transl_table=11
JAGETS010000002.1	Genbank	pseudogene	6006	8026	.	-	.	ID=gene-J4731_01355;Name=J4731_01355;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_01355;pseudo=true
JAGETS010000002.1	Protein Homology	CDS	6006	8026	.	-	0	ID=cds-J4731_01355;Parent=gene-J4731_01355;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004924336.1;locus_tag=J4731_01355;product=polysaccharide biosynthesis tyrosine autokinase;pseudo=true;transl_table=11
JAGETS010000002.1	Genbank	pseudogene	8099	8520	.	-	.	ID=gene-J4731_01360;Name=J4731_01360;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_01360;pseudo=true
JAGETS010000002.1	Protein Homology	CDS	8099	8520	.	-	0	ID=cds-J4731_01360;Parent=gene-J4731_01360;Note=Wzb shows phosphatase activity towards the autophosphorylated Wzc protein%2C which induces colanic acid biosynthesis%3B catalyzes the phosphorylation of UDP-glucose dehydrogenase%2C an enzyme involved in colanic acid biosynthesis%3B frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004924339.1;locus_tag=J4731_01360;product=protein tyrosine phosphatase;pseudo=true;transl_table=11
JAGETS010000002.1	Genbank	pseudogene	8526	9583	.	-	.	ID=gene-J4731_01365;Name=J4731_01365;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_01365;pseudo=true
JAGETS010000002.1	Protein Homology	CDS	8526	9583	.	-	0	ID=cds-J4731_01365;Parent=gene-J4731_01365;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000978094.1;locus_tag=J4731_01365;product=polysaccharide biosynthesis/export family protein;pseudo=true;transl_table=11
JAGETS010000002.1	Genbank	pseudogene	9814	9948	.	-	.	ID=gene-J4731_01370;Name=J4731_01370;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_01370;pseudo=true
JAGETS010000002.1	Protein Homology	CDS	9814	9948	.	-	0	ID=cds-J4731_01370;Parent=gene-J4731_01370;Note=catalyzes the formation of UDP-glucuronate from UDP-glucose%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014657221.1;locus_tag=J4731_01370;product=UDP-glucose 6-dehydrogenase;pseudo=true;transl_table=11
JAGETS010000002.1	Genbank	pseudogene	10186	10374	.	-	.	ID=gene-J4731_01375;Name=J4731_01375;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_01375;pseudo=true
JAGETS010000002.1	Protein Homology	CDS	10186	10374	.	-	0	ID=cds-J4731_01375;Parent=gene-J4731_01375;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611161.1;locus_tag=J4731_01375;product=IS1 family transposase;pseudo=true;transl_table=11
JAGETS010000002.1	Genbank	pseudogene	10634	11322	.	-	.	ID=gene-J4731_01380;Name=J4731_01380;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_01380;pseudo=true
JAGETS010000002.1	Protein Homology	CDS	10634	11322	.	-	0	ID=cds-J4731_01380;Parent=gene-J4731_01380;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611130.1;locus_tag=J4731_01380;product=IS5 family transposase;pseudo=true;transl_table=11
JAGETS010000002.1	Genbank	gene	11444	11752	.	-	.	ID=gene-J4731_01385;Name=J4731_01385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_01385
JAGETS010000002.1	Protein Homology	CDS	11444	11752	.	-	0	ID=cds-MBO1928606.1;Parent=gene-J4731_01385;Dbxref=NCBI_GP:MBO1928606.1;Name=MBO1928606.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012744.1;locus_tag=J4731_01385;product=glycosyltransferase;protein_id=MBO1928606.1;transl_table=11
JAGETS010000002.1	Genbank	gene	12120	12524	.	-	.	ID=gene-J4731_01390;Name=J4731_01390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_01390
JAGETS010000002.1	Protein Homology	CDS	12120	12524	.	-	0	ID=cds-MBO1928607.1;Parent=gene-J4731_01390;Dbxref=NCBI_GP:MBO1928607.1;Name=MBO1928607.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024831.1;locus_tag=J4731_01390;product=glycosyltransferase;protein_id=MBO1928607.1;transl_table=11
JAGETS010000002.1	Genbank	gene	13663	13905	.	-	.	ID=gene-J4731_01395;Name=J4731_01395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_01395
JAGETS010000002.1	Protein Homology	CDS	13663	13905	.	-	0	ID=cds-MBO1928608.1;Parent=gene-J4731_01395;Dbxref=NCBI_GP:MBO1928608.1;Name=MBO1928608.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF026247.1;locus_tag=J4731_01395;product=EpsG family protein;protein_id=MBO1928608.1;transl_table=11
JAGETS010000002.1	Genbank	gene	13893	14195	.	-	.	ID=gene-J4731_01400;Name=J4731_01400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_01400
JAGETS010000002.1	Protein Homology	CDS	13893	14195	.	-	0	ID=cds-MBO1928609.1;Parent=gene-J4731_01400;Dbxref=NCBI_GP:MBO1928609.1;Name=MBO1928609.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF026247.1;locus_tag=J4731_01400;product=EpsG family protein;protein_id=MBO1928609.1;transl_table=11
JAGETS010000002.1	Genbank	gene	14804	15076	.	-	.	ID=gene-J4731_01405;Name=J4731_01405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_01405
JAGETS010000002.1	GeneMarkS-2+	CDS	14804	15076	.	-	0	ID=cds-MBO1928610.1;Parent=gene-J4731_01405;Dbxref=NCBI_GP:MBO1928610.1;Name=MBO1928610.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_01405;product=hypothetical protein;protein_id=MBO1928610.1;transl_table=11
JAGETS010000002.1	Genbank	gene	15066	15296	.	-	.	ID=gene-J4731_01410;Name=J4731_01410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_01410
JAGETS010000002.1	Protein Homology	CDS	15066	15296	.	-	0	ID=cds-MBO1928611.1;Parent=gene-J4731_01410;Dbxref=NCBI_GP:MBO1928611.1;Name=MBO1928611.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016377.1;locus_tag=J4731_01410;product=hypothetical protein;protein_id=MBO1928611.1;transl_table=11
JAGETS010000002.1	Genbank	pseudogene	15419	16183	.	-	.	ID=gene-J4731_01415;Name=J4731_01415;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_01415;pseudo=true
JAGETS010000002.1	Protein Homology	CDS	15419	16183	.	-	0	ID=cds-J4731_01415;Parent=gene-J4731_01415;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611700.1;locus_tag=J4731_01415;product=IS5 family transposase;pseudo=true;transl_table=11
JAGETS010000002.1	Genbank	gene	16802	17023	.	-	.	ID=gene-J4731_01420;Name=J4731_01420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_01420
JAGETS010000002.1	Protein Homology	CDS	16802	17023	.	-	0	ID=cds-MBO1928612.1;Parent=gene-J4731_01420;Dbxref=NCBI_GP:MBO1928612.1;Name=MBO1928612.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012745.1;locus_tag=J4731_01420;product=hypothetical protein;protein_id=MBO1928612.1;transl_table=11
JAGETS010000002.1	Genbank	pseudogene	17323	18470	.	-	.	ID=gene-J4731_01425;Name=J4731_01425;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_01425;pseudo=true
JAGETS010000002.1	Protein Homology	CDS	17323	18470	.	-	0	ID=cds-J4731_01425;Parent=gene-J4731_01425;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014657221.1;locus_tag=J4731_01425;product=nucleotide sugar dehydrogenase;pseudo=true;transl_table=11
JAGETS010000002.1	Genbank	gene	18538	18663	.	-	.	ID=gene-J4731_01430;Name=J4731_01430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_01430
JAGETS010000002.1	Protein Homology	CDS	18538	18663	.	-	0	ID=cds-MBO1928613.1;Parent=gene-J4731_01430;Dbxref=NCBI_GP:MBO1928613.1;Name=MBO1928613.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025663.1;locus_tag=J4731_01430;product=hypothetical protein;protein_id=MBO1928613.1;transl_table=11
JAGETS010000002.1	Genbank	gene	20161	20391	.	-	.	ID=gene-J4731_01435;Name=J4731_01435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_01435
JAGETS010000002.1	GeneMarkS-2+	CDS	20161	20391	.	-	0	ID=cds-MBO1928614.1;Parent=gene-J4731_01435;Dbxref=NCBI_GP:MBO1928614.1;Name=MBO1928614.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_01435;product=hypothetical protein;protein_id=MBO1928614.1;transl_table=11
JAGETS010000002.1	Genbank	gene	20503	20682	.	-	.	ID=gene-J4731_01440;Name=J4731_01440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_01440
JAGETS010000002.1	GeneMarkS-2+	CDS	20503	20682	.	-	0	ID=cds-MBO1928615.1;Parent=gene-J4731_01440;Dbxref=NCBI_GP:MBO1928615.1;Name=MBO1928615.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_01440;product=hypothetical protein;protein_id=MBO1928615.1;transl_table=11
JAGETS010000002.1	Genbank	pseudogene	21742	22225	.	+	.	ID=gene-J4731_01445;Name=J4731_01445;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_01445;pseudo=true
JAGETS010000002.1	Protein Homology	CDS	21742	22225	.	+	0	ID=cds-J4731_01445;Parent=gene-J4731_01445;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001339197.1;locus_tag=J4731_01445;product=IS4 family transposase;pseudo=true;transl_table=11
JAGETS010000002.1	Genbank	gene	22236	22385	.	+	.	ID=gene-J4731_01450;Name=J4731_01450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_01450
JAGETS010000002.1	GeneMarkS-2+	CDS	22236	22385	.	+	0	ID=cds-MBO1928616.1;Parent=gene-J4731_01450;Dbxref=NCBI_GP:MBO1928616.1;Name=MBO1928616.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_01450;product=hypothetical protein;protein_id=MBO1928616.1;transl_table=11
JAGETS010000002.1	Genbank	pseudogene	22613	23800	.	+	.	ID=gene-J4731_01455;Name=J4731_01455;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_01455;pseudo=true
JAGETS010000002.1	Protein Homology	CDS	22613	23800	.	+	0	ID=cds-J4731_01455;Parent=gene-J4731_01455;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004144477.1;locus_tag=J4731_01455;product=IS91 family transposase;pseudo=true;transl_table=11
JAGETS010000002.1	Genbank	gene	23972	24196	.	+	.	ID=gene-J4731_01460;Name=J4731_01460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_01460
JAGETS010000002.1	Protein Homology	CDS	23972	24196	.	+	0	ID=cds-MBO1928617.1;Parent=gene-J4731_01460;Dbxref=NCBI_GP:MBO1928617.1;Name=MBO1928617.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015365.1;locus_tag=J4731_01460;product=IS1 family transposase;protein_id=MBO1928617.1;transl_table=11
JAGETS010000002.1	Genbank	gene	25355	25519	.	-	.	ID=gene-J4731_01465;Name=J4731_01465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_01465
JAGETS010000002.1	GeneMarkS-2+	CDS	25355	25519	.	-	0	ID=cds-MBO1928618.1;Parent=gene-J4731_01465;Dbxref=NCBI_GP:MBO1928618.1;Name=MBO1928618.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_01465;product=hypothetical protein;protein_id=MBO1928618.1;transl_table=11
JAGETS010000002.1	Genbank	gene	25720	25944	.	-	.	ID=gene-J4731_01470;Name=J4731_01470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_01470
JAGETS010000002.1	GeneMarkS-2+	CDS	25720	25944	.	-	0	ID=cds-MBO1928619.1;Parent=gene-J4731_01470;Dbxref=NCBI_GP:MBO1928619.1;Name=MBO1928619.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_01470;product=hypothetical protein;protein_id=MBO1928619.1;transl_table=11
JAGETS010000002.1	Genbank	gene	26192	26377	.	-	.	ID=gene-J4731_01475;Name=J4731_01475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_01475
JAGETS010000002.1	Protein Homology	CDS	26192	26377	.	-	0	ID=cds-MBO1928620.1;Parent=gene-J4731_01475;Dbxref=NCBI_GP:MBO1928620.1;Name=MBO1928620.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012368756.1;locus_tag=J4731_01475;product=AlpA family transcriptional regulator;protein_id=MBO1928620.1;transl_table=11
JAGETS010000002.1	Genbank	pseudogene	26552	27128	.	-	.	ID=gene-J4731_01480;Name=J4731_01480;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_01480;pseudo=true
JAGETS010000002.1	Protein Homology	CDS	26552	27128	.	-	0	ID=cds-J4731_01480;Parent=gene-J4731_01480;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006814452.1;locus_tag=J4731_01480;product=inovirus Gp2 family protein;pseudo=true;transl_table=11
JAGETS010000002.1	Genbank	pseudogene	27561	28484	.	+	.	ID=gene-J4731_01485;Name=J4731_01485;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_01485;pseudo=true
JAGETS010000002.1	Protein Homology	CDS	27561	28484	.	+	0	ID=cds-J4731_01485;Parent=gene-J4731_01485;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246166.1;locus_tag=J4731_01485;product=hypothetical protein;pseudo=true;transl_table=11
JAGETS010000002.1	Genbank	pseudogene	28541	29335	.	+	.	ID=gene-J4731_01490;Name=J4731_01490;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_01490;pseudo=true
JAGETS010000002.1	Protein Homology	CDS	28541	29335	.	+	0	ID=cds-J4731_01490;Parent=gene-J4731_01490;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014657554.1;locus_tag=J4731_01490;product=50S ribosome-binding GTPase;pseudo=true;transl_table=11
JAGETS010000002.1	Genbank	pseudogene	29623	29917	.	+	.	ID=gene-J4731_01495;Name=J4731_01495;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_01495;pseudo=true
JAGETS010000002.1	Protein Homology	CDS	29623	29917	.	+	0	ID=cds-J4731_01495;Parent=gene-J4731_01495;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004905196.1;locus_tag=J4731_01495;product=antirestriction protein;pseudo=true;transl_table=11
JAGETS010000002.1	Genbank	pseudogene	30157	30590	.	+	.	ID=gene-J4731_01500;Name=J4731_01500;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_01500;pseudo=true
JAGETS010000002.1	Protein Homology	CDS	30157	30590	.	+	0	ID=cds-J4731_01500;Parent=gene-J4731_01500;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004261423.1;locus_tag=J4731_01500;product=antirestriction protein;pseudo=true;transl_table=11
JAGETS010000002.1	Genbank	pseudogene	30686	31505	.	+	.	ID=gene-J4731_01505;Name=J4731_01505;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_01505;pseudo=true
JAGETS010000002.1	Protein Homology	CDS	30686	31505	.	+	0	ID=cds-J4731_01505;Parent=gene-J4731_01505;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000197395.1;locus_tag=J4731_01505;product=DUF945 domain-containing protein;pseudo=true;transl_table=11
JAGETS010000002.1	Genbank	pseudogene	31523	31870	.	+	.	ID=gene-J4731_01510;Name=J4731_01510;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_01510;pseudo=true
JAGETS010000002.1	Protein Homology	CDS	31523	31870	.	+	0	ID=cds-J4731_01510;Parent=gene-J4731_01510;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004854314.1;locus_tag=J4731_01510;product=hypothetical protein;pseudo=true;transl_table=11
JAGETS010000002.1	Genbank	pseudogene	32005	33087	.	+	.	ID=gene-J4731_01515;Name=J4731_01515;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_01515;pseudo=true
JAGETS010000002.1	Protein Homology	CDS	32005	33087	.	+	0	ID=cds-J4731_01515;Parent=gene-J4731_01515;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003734338.1;locus_tag=J4731_01515;product=tyrosine-type recombinase/integrase;pseudo=true;transl_table=11
JAGETS010000002.1	Genbank	pseudogene	33084	34970	.	+	.	ID=gene-J4731_01520;Name=J4731_01520;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_01520;pseudo=true
JAGETS010000002.1	Protein Homology	CDS	33084	34970	.	+	0	ID=cds-J4731_01520;Parent=gene-J4731_01520;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003734337.1;locus_tag=J4731_01520;product=tyrosine-type recombinase/integrase;pseudo=true;transl_table=11
JAGETS010000002.1	Genbank	pseudogene	35663	36453	.	+	.	ID=gene-J4731_01525;Name=lnuG;gbkey=Gene;gene=lnuG;gene_biotype=pseudogene;locus_tag=J4731_01525;pseudo=true
JAGETS010000002.1	Protein Homology	CDS	35663	36453	.	+	0	ID=cds-J4731_01525;Parent=gene-J4731_01525;Note=frameshifted%3B internal stop;gbkey=CDS;gene=lnuG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002333496.1;locus_tag=J4731_01525;product=lincosamide nucleotidyltransferase Lnu(G);pseudo=true;transl_table=11
JAGETS010000002.1	Genbank	pseudogene	36570	36713	.	+	.	ID=gene-J4731_01530;Name=J4731_01530;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_01530;pseudo=true
JAGETS010000002.1	Protein Homology	CDS	36570	36713	.	+	0	ID=cds-J4731_01530;Parent=gene-J4731_01530;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004917178.1;locus_tag=J4731_01530;product=hypothetical protein;pseudo=true;transl_table=11
JAGETS010000002.1	Genbank	pseudogene	36717	36925	.	+	.	ID=gene-J4731_01535;Name=J4731_01535;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_01535;pseudo=true
JAGETS010000002.1	Protein Homology	CDS	36717	36925	.	+	0	ID=cds-J4731_01535;Parent=gene-J4731_01535;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004917300.1;locus_tag=J4731_01535;product=DUF987 family protein;pseudo=true;transl_table=11
JAGETS010000002.1	Genbank	pseudogene	38071	39216	.	+	.	ID=gene-J4731_01540;Name=J4731_01540;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_01540;pseudo=true
JAGETS010000002.1	Protein Homology	CDS	38071	39216	.	+	0	ID=cds-J4731_01540;Parent=gene-J4731_01540;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004258885.1;locus_tag=J4731_01540;product=N-acetylneuraminate epimerase;pseudo=true;transl_table=11
JAGETS010000002.1	Genbank	pseudogene	39299	39958	.	+	.	ID=gene-J4731_01545;Name=J4731_01545;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_01545;pseudo=true
JAGETS010000002.1	Protein Homology	CDS	39299	39958	.	+	0	ID=cds-J4731_01545;Parent=gene-J4731_01545;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006534451.1;locus_tag=J4731_01545;product=hypothetical protein;pseudo=true;transl_table=11
JAGETS010000002.1	Genbank	pseudogene	40159	40843	.	+	.	ID=gene-J4731_01550;Name=J4731_01550;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_01550;pseudo=true
JAGETS010000002.1	Protein Homology	CDS	40159	40843	.	+	0	ID=cds-J4731_01550;Parent=gene-J4731_01550;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012368574.1;locus_tag=J4731_01550;product=putative N-acetylmannosamine-6-phosphate 2-epimerase;pseudo=true;transl_table=11
JAGETS010000002.1	Genbank	gene	40840	41063	.	+	.	ID=gene-J4731_01555;Name=J4731_01555;end_range=41063,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_01555;partial=true
JAGETS010000002.1	Protein Homology	CDS	40840	41063	.	+	0	ID=cds-MBO1928621.1;Parent=gene-J4731_01555;Dbxref=NCBI_GP:MBO1928621.1;Name=MBO1928621.1;end_range=41063,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017827146.1;locus_tag=J4731_01555;partial=true;product=ROK family protein;protein_id=MBO1928621.1;transl_table=11
##sequence-region JAGETS010000020.1 1 153359
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=587
JAGETS010000020.1	Genbank	region	1	153359	.	+	.	ID=JAGETS010000020.1:1..153359;Dbxref=taxon:587;collected-by=NHLS;collection-date=2018;country=South Africa: Pretoria;gbkey=Src;isolation-source=stool;lat-lon=25.7479 S 28.2293 E;mol_type=genomic DNA;nat-host=porcine;strain=SG003
JAGETS010000020.1	Genbank	pseudogene	311	1695	.	+	.	ID=gene-J4731_11145;Name=J4731_11145;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_11145;pseudo=true
JAGETS010000020.1	Protein Homology	CDS	311	1695	.	+	0	ID=cds-J4731_11145;Parent=gene-J4731_11145;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006119943.1;locus_tag=J4731_11145;product=amino acid permease;pseudo=true;transl_table=11
JAGETS010000020.1	Genbank	pseudogene	1949	3072	.	+	.	ID=gene-J4731_11150;Name=J4731_11150;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_11150;pseudo=true
JAGETS010000020.1	Protein Homology	CDS	1949	3072	.	+	0	ID=cds-J4731_11150;Parent=gene-J4731_11150;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010846712.1;locus_tag=J4731_11150;product=ABC transporter substrate-binding protein;pseudo=true;transl_table=11
JAGETS010000020.1	Genbank	pseudogene	3092	4178	.	+	.	ID=gene-J4731_11155;Name=J4731_11155;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_11155;pseudo=true
JAGETS010000020.1	Protein Homology	CDS	3092	4178	.	+	0	ID=cds-J4731_11155;Parent=gene-J4731_11155;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004920866.1;locus_tag=J4731_11155;product=iron ABC transporter permease;pseudo=true;transl_table=11
JAGETS010000020.1	Genbank	pseudogene	4172	4958	.	+	.	ID=gene-J4731_11160;Name=J4731_11160;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_11160;pseudo=true
JAGETS010000020.1	Protein Homology	CDS	4172	4958	.	+	0	ID=cds-J4731_11160;Parent=gene-J4731_11160;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004920863.1;locus_tag=J4731_11160;product=ABC transporter ATP-binding protein;pseudo=true;transl_table=11
JAGETS010000020.1	Genbank	pseudogene	5247	7197	.	+	.	ID=gene-J4731_11165;Name=J4731_11165;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_11165;pseudo=true
JAGETS010000020.1	Protein Homology	CDS	5247	7197	.	+	0	ID=cds-J4731_11165;Parent=gene-J4731_11165;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006660791.1;locus_tag=J4731_11165;product=ligand-gated channel protein;pseudo=true;transl_table=11
JAGETS010000020.1	Genbank	pseudogene	7552	7759	.	+	.	ID=gene-J4731_11170;Name=J4731_11170;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_11170;pseudo=true
JAGETS010000020.1	Protein Homology	CDS	7552	7759	.	+	0	ID=cds-J4731_11170;Parent=gene-J4731_11170;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004920859.1;locus_tag=J4731_11170;product=hypothetical protein;pseudo=true;transl_table=11
JAGETS010000020.1	Genbank	pseudogene	7749	9128	.	+	.	ID=gene-J4731_11175;Name=J4731_11175;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_11175;pseudo=true
JAGETS010000020.1	Protein Homology	CDS	7749	9128	.	+	0	ID=cds-J4731_11175;Parent=gene-J4731_11175;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006660794.1;locus_tag=J4731_11175;product=APC family permease;pseudo=true;transl_table=11
JAGETS010000020.1	Genbank	pseudogene	9423	11157	.	+	.	ID=gene-J4731_11180;Name=dld;gbkey=Gene;gene=dld;gene_biotype=pseudogene;locus_tag=J4731_11180;pseudo=true
JAGETS010000020.1	Protein Homology	CDS	9423	11157	.	+	0	ID=cds-J4731_11180;Parent=gene-J4731_11180;Note=frameshifted%3B internal stop;gbkey=CDS;gene=dld;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017892027.1;locus_tag=J4731_11180;product=D-lactate dehydrogenase;pseudo=true;transl_table=11
JAGETS010000020.1	Genbank	pseudogene	11209	12615	.	-	.	ID=gene-J4731_11185;Name=sbcB;gbkey=Gene;gene=sbcB;gene_biotype=pseudogene;locus_tag=J4731_11185;pseudo=true
JAGETS010000020.1	Protein Homology	CDS	11209	12615	.	-	0	ID=cds-J4731_11185;Parent=gene-J4731_11185;Note=frameshifted%3B internal stop;gbkey=CDS;gene=sbcB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012989267.1;locus_tag=J4731_11185;product=exodeoxyribonuclease I;pseudo=true;transl_table=11
JAGETS010000020.1	Genbank	pseudogene	12960	14154	.	+	.	ID=gene-J4731_11190;Name=J4731_11190;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_11190;pseudo=true
JAGETS010000020.1	Protein Homology	CDS	12960	14154	.	+	0	ID=cds-J4731_11190;Parent=gene-J4731_11190;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004701616.1;locus_tag=J4731_11190;product=oligosaccharide MFS transporter;pseudo=true;transl_table=11
JAGETS010000020.1	Genbank	pseudogene	14337	14648	.	+	.	ID=gene-J4731_11195;Name=J4731_11195;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_11195;pseudo=true
JAGETS010000020.1	Protein Homology	CDS	14337	14648	.	+	0	ID=cds-J4731_11195;Parent=gene-J4731_11195;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006318052.1;locus_tag=J4731_11195;product=DUF496 family protein;pseudo=true;transl_table=11
JAGETS010000020.1	Genbank	pseudogene	14720	15445	.	-	.	ID=gene-J4731_11200;Name=J4731_11200;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_11200;pseudo=true
JAGETS010000020.1	Protein Homology	CDS	14720	15445	.	-	0	ID=cds-J4731_11200;Parent=gene-J4731_11200;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004253181.1;locus_tag=J4731_11200;product=IclR family transcriptional regulator;pseudo=true;transl_table=11
JAGETS010000020.1	Genbank	pseudogene	15614	17904	.	+	.	ID=gene-J4731_11205;Name=J4731_11205;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_11205;pseudo=true
JAGETS010000020.1	Protein Homology	CDS	15614	17904	.	+	0	ID=cds-J4731_11205;Parent=gene-J4731_11205;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004253184.1;locus_tag=J4731_11205;product=molybdopterin-dependent oxidoreductase;pseudo=true;transl_table=11
JAGETS010000020.1	Genbank	pseudogene	17961	18442	.	+	.	ID=gene-J4731_11210;Name=J4731_11210;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_11210;pseudo=true
JAGETS010000020.1	Protein Homology	CDS	17961	18442	.	+	0	ID=cds-J4731_11210;Parent=gene-J4731_11210;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004706861.1;locus_tag=J4731_11210;product=4Fe-4S dicluster domain-containing protein;pseudo=true;transl_table=11
JAGETS010000020.1	Genbank	pseudogene	18445	19246	.	+	.	ID=gene-J4731_11215;Name=J4731_11215;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_11215;pseudo=true
JAGETS010000020.1	Protein Homology	CDS	18445	19246	.	+	0	ID=cds-J4731_11215;Parent=gene-J4731_11215;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004253189.1;locus_tag=J4731_11215;product=dimethyl sulfoxide reductase anchor subunit;pseudo=true;transl_table=11
JAGETS010000020.1	Genbank	gene	19930	20154	.	+	.	ID=gene-J4731_11220;Name=J4731_11220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_11220
JAGETS010000020.1	GeneMarkS-2+	CDS	19930	20154	.	+	0	ID=cds-MBO1929185.1;Parent=gene-J4731_11220;Dbxref=NCBI_GP:MBO1929185.1;Name=MBO1929185.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_11220;product=hypothetical protein;protein_id=MBO1929185.1;transl_table=11
JAGETS010000020.1	Genbank	pseudogene	20279	20870	.	-	.	ID=gene-J4731_11225;Name=J4731_11225;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_11225;pseudo=true
JAGETS010000020.1	Protein Homology	CDS	20279	20870	.	-	0	ID=cds-J4731_11225;Parent=gene-J4731_11225;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004846643.1;locus_tag=J4731_11225;product=hypothetical protein;pseudo=true;transl_table=11
JAGETS010000020.1	Genbank	pseudogene	21354	24598	.	-	.	ID=gene-J4731_11230;Name=rne;gbkey=Gene;gene=rne;gene_biotype=pseudogene;locus_tag=J4731_11230;pseudo=true
JAGETS010000020.1	Protein Homology	CDS	21354	24598	.	-	0	ID=cds-J4731_11230;Parent=gene-J4731_11230;Note=frameshifted%3B internal stop;gbkey=CDS;gene=rne;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004247819.1;locus_tag=J4731_11230;product=ribonuclease E;pseudo=true;transl_table=11
JAGETS010000020.1	Genbank	pseudogene	25145	26104	.	+	.	ID=gene-J4731_11235;Name=rluC;gbkey=Gene;gene=rluC;gene_biotype=pseudogene;locus_tag=J4731_11235;pseudo=true
JAGETS010000020.1	Protein Homology	CDS	25145	26104	.	+	0	ID=cds-J4731_11235;Parent=gene-J4731_11235;Note=frameshifted%3B internal stop;gbkey=CDS;gene=rluC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013576252.1;locus_tag=J4731_11235;product=23S rRNA pseudouridine(955/2504/2580) synthase RluC;pseudo=true;transl_table=11
JAGETS010000020.1	Genbank	pseudogene	26133	26704	.	-	.	ID=gene-J4731_11240;Name=maf;gbkey=Gene;gene=maf;gene_biotype=pseudogene;locus_tag=J4731_11240;pseudo=true
JAGETS010000020.1	Protein Homology	CDS	26133	26704	.	-	0	ID=cds-J4731_11240;Parent=gene-J4731_11240;Note=frameshifted;gbkey=CDS;gene=maf;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004920837.1;locus_tag=J4731_11240;product=septum formation inhibitor Maf;pseudo=true;transl_table=11
JAGETS010000020.1	Genbank	pseudogene	27351	27555	.	+	.	ID=gene-J4731_11245;Name=rpmF;gbkey=Gene;gene=rpmF;gene_biotype=pseudogene;locus_tag=J4731_11245;pseudo=true
JAGETS010000020.1	Protein Homology	CDS	27351	27555	.	+	0	ID=cds-J4731_11245;Parent=gene-J4731_11245;Note=frameshifted%3B internal stop;gbkey=CDS;gene=rpmF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003857964.1;locus_tag=J4731_11245;product=50S ribosomal protein L32;pseudo=true;transl_table=11
JAGETS010000020.1	Genbank	pseudogene	27561	28552	.	+	.	ID=gene-J4731_11250;Name=plsX;gbkey=Gene;gene=plsX;gene_biotype=pseudogene;locus_tag=J4731_11250;pseudo=true
JAGETS010000020.1	Protein Homology	CDS	27561	28552	.	+	0	ID=cds-J4731_11250;Parent=gene-J4731_11250;Note=frameshifted;gbkey=CDS;gene=plsX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006660803.1;locus_tag=J4731_11250;product=phosphate acyltransferase PlsX;pseudo=true;transl_table=11
JAGETS010000020.1	Genbank	pseudogene	28633	29507	.	+	.	ID=gene-J4731_11255;Name=J4731_11255;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_11255;pseudo=true
JAGETS010000020.1	Protein Homology	CDS	28633	29507	.	+	0	ID=cds-J4731_11255;Parent=gene-J4731_11255;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012848935.1;locus_tag=J4731_11255;product=ketoacyl-ACP synthase III;pseudo=true;transl_table=11
JAGETS010000020.1	Genbank	pseudogene	29526	30449	.	+	.	ID=gene-J4731_11260;Name=fabD;gbkey=Gene;gene=fabD;gene_biotype=pseudogene;locus_tag=J4731_11260;pseudo=true
JAGETS010000020.1	Protein Homology	CDS	29526	30449	.	+	0	ID=cds-J4731_11260;Parent=gene-J4731_11260;Note=frameshifted;gbkey=CDS;gene=fabD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015833844.1;locus_tag=J4731_11260;product=ACP S-malonyltransferase;pseudo=true;transl_table=11
JAGETS010000020.1	Genbank	pseudogene	30457	31158	.	+	.	ID=gene-J4731_11265;Name=J4731_11265;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_11265;pseudo=true
JAGETS010000020.1	Protein Homology	CDS	30457	31158	.	+	0	ID=cds-J4731_11265;Parent=gene-J4731_11265;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129017.1;locus_tag=J4731_11265;product=3-oxoacyl-ACP reductase FabG;pseudo=true;transl_table=11
JAGETS010000020.1	Genbank	pseudogene	31315	31548	.	+	.	ID=gene-J4731_11270;Name=acpP;gbkey=Gene;gene=acpP;gene_biotype=pseudogene;locus_tag=J4731_11270;pseudo=true
JAGETS010000020.1	Protein Homology	CDS	31315	31548	.	+	0	ID=cds-J4731_11270;Parent=gene-J4731_11270;Note=frameshifted;gbkey=CDS;gene=acpP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016940845.1;locus_tag=J4731_11270;product=acyl carrier protein;pseudo=true;transl_table=11
JAGETS010000020.1	Genbank	pseudogene	31658	32849	.	+	.	ID=gene-J4731_11275;Name=fabF;gbkey=Gene;gene=fabF;gene_biotype=pseudogene;locus_tag=J4731_11275;pseudo=true
JAGETS010000020.1	Protein Homology	CDS	31658	32849	.	+	0	ID=cds-J4731_11275;Parent=gene-J4731_11275;Note=frameshifted;gbkey=CDS;gene=fabF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008910817.1;locus_tag=J4731_11275;product=beta-ketoacyl-ACP synthase II;pseudo=true;transl_table=11
JAGETS010000020.1	Genbank	pseudogene	32995	33829	.	+	.	ID=gene-J4731_11280;Name=pabC;gbkey=Gene;gene=pabC;gene_biotype=pseudogene;locus_tag=J4731_11280;pseudo=true
JAGETS010000020.1	Protein Homology	CDS	32995	33829	.	+	0	ID=cds-J4731_11280;Parent=gene-J4731_11280;Note=frameshifted%3B internal stop;gbkey=CDS;gene=pabC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004253243.1;locus_tag=J4731_11280;product=aminodeoxychorismate lyase;pseudo=true;transl_table=11
JAGETS010000020.1	Genbank	pseudogene	33885	34882	.	+	.	ID=gene-J4731_11285;Name=mltG;gbkey=Gene;gene=mltG;gene_biotype=pseudogene;locus_tag=J4731_11285;pseudo=true
JAGETS010000020.1	Protein Homology	CDS	33885	34882	.	+	0	ID=cds-J4731_11285;Parent=gene-J4731_11285;Note=frameshifted;gbkey=CDS;gene=mltG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008910819.1;locus_tag=J4731_11285;product=endolytic transglycosylase MltG;pseudo=true;transl_table=11
JAGETS010000020.1	Genbank	pseudogene	34888	35510	.	+	.	ID=gene-J4731_11290;Name=J4731_11290;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_11290;pseudo=true
JAGETS010000020.1	Protein Homology	CDS	34888	35510	.	+	0	ID=cds-J4731_11290;Parent=gene-J4731_11290;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015705040.1;locus_tag=J4731_11290;product=dTMP kinase;pseudo=true;transl_table=11
JAGETS010000020.1	Genbank	pseudogene	35535	36524	.	+	.	ID=gene-J4731_11295;Name=holB;gbkey=Gene;gene=holB;gene_biotype=pseudogene;locus_tag=J4731_11295;pseudo=true
JAGETS010000020.1	Protein Homology	CDS	35535	36524	.	+	0	ID=cds-J4731_11295;Parent=gene-J4731_11295;Note=frameshifted%3B internal stop;gbkey=CDS;gene=holB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006661435.1;locus_tag=J4731_11295;product=DNA polymerase III subunit delta';pseudo=true;transl_table=11
JAGETS010000020.1	Genbank	pseudogene	36537	37324	.	+	.	ID=gene-J4731_11300;Name=J4731_11300;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_11300;pseudo=true
JAGETS010000020.1	Protein Homology	CDS	36537	37324	.	+	0	ID=cds-J4731_11300;Parent=gene-J4731_11300;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004253269.1;locus_tag=J4731_11300;product=metal-dependent hydrolase;pseudo=true;transl_table=11
JAGETS010000020.1	Genbank	pseudogene	37365	37710	.	+	.	ID=gene-J4731_11305;Name=J4731_11305;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_11305;pseudo=true
JAGETS010000020.1	Protein Homology	CDS	37365	37710	.	+	0	ID=cds-J4731_11305;Parent=gene-J4731_11305;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004920823.1;locus_tag=J4731_11305;product=HIT domain-containing protein;pseudo=true;transl_table=11
JAGETS010000020.1	Genbank	pseudogene	37723	38112	.	+	.	ID=gene-J4731_11310;Name=J4731_11310;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_11310;pseudo=true
JAGETS010000020.1	Protein Homology	CDS	37723	38112	.	+	0	ID=cds-J4731_11310;Parent=gene-J4731_11310;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004253275.1;locus_tag=J4731_11310;product=YcfL family protein;pseudo=true;transl_table=11
JAGETS010000020.1	Genbank	pseudogene	38115	38685	.	+	.	ID=gene-J4731_11315;Name=lpoB;gbkey=Gene;gene=lpoB;gene_biotype=pseudogene;locus_tag=J4731_11315;pseudo=true
JAGETS010000020.1	Protein Homology	CDS	38115	38685	.	+	0	ID=cds-J4731_11315;Parent=gene-J4731_11315;Note=frameshifted%3B internal stop;gbkey=CDS;gene=lpoB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006660816.1;locus_tag=J4731_11315;product=penicillin-binding protein activator LpoB;pseudo=true;transl_table=11
JAGETS010000020.1	Genbank	pseudogene	38678	39543	.	+	.	ID=gene-J4731_11320;Name=J4731_11320;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_11320;pseudo=true
JAGETS010000020.1	Protein Homology	CDS	38678	39543	.	+	0	ID=cds-J4731_11320;Parent=gene-J4731_11320;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006660817.1;locus_tag=J4731_11320;product=thiamine kinase;pseudo=true;transl_table=11
JAGETS010000020.1	Genbank	pseudogene	39607	40620	.	+	.	ID=gene-J4731_11325;Name=nagZ;gbkey=Gene;gene=nagZ;gene_biotype=pseudogene;locus_tag=J4731_11325;pseudo=true
JAGETS010000020.1	Protein Homology	CDS	39607	40620	.	+	0	ID=cds-J4731_11325;Parent=gene-J4731_11325;Note=frameshifted;gbkey=CDS;gene=nagZ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004920819.1;locus_tag=J4731_11325;product=beta-N-acetylhexosaminidase;pseudo=true;transl_table=11
JAGETS010000020.1	Genbank	pseudogene	41969	43299	.	+	.	ID=gene-J4731_11330;Name=J4731_11330;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_11330;pseudo=true
JAGETS010000020.1	Protein Homology	CDS	41969	43299	.	+	0	ID=cds-J4731_11330;Parent=gene-J4731_11330;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004242576.1;locus_tag=J4731_11330;product=OprD family outer membrane porin;pseudo=true;transl_table=11
JAGETS010000020.1	Genbank	pseudogene	43351	44938	.	+	.	ID=gene-J4731_11335;Name=J4731_11335;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_11335;pseudo=true
JAGETS010000020.1	Protein Homology	CDS	43351	44938	.	+	0	ID=cds-J4731_11335;Parent=gene-J4731_11335;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006661440.1;locus_tag=J4731_11335;product=bifunctional metallophosphatase/5'-nucleotidase;pseudo=true;transl_table=11
JAGETS010000020.1	Genbank	pseudogene	45345	46643	.	+	.	ID=gene-J4731_11340;Name=J4731_11340;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_11340;pseudo=true
JAGETS010000020.1	Protein Homology	CDS	45345	46643	.	+	0	ID=cds-J4731_11340;Parent=gene-J4731_11340;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015683597.1;locus_tag=J4731_11340;product=NAD(P)/FAD-dependent oxidoreductase;pseudo=true;transl_table=11
JAGETS010000020.1	Genbank	pseudogene	47230	47820	.	+	.	ID=gene-J4731_11345;Name=J4731_11345;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_11345;pseudo=true
JAGETS010000020.1	Protein Homology	CDS	47230	47820	.	+	0	ID=cds-J4731_11345;Parent=gene-J4731_11345;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006660823.1;locus_tag=J4731_11345;product=hypothetical protein;pseudo=true;transl_table=11
JAGETS010000020.1	Genbank	pseudogene	47889	51301	.	-	.	ID=gene-J4731_11350;Name=mfd;gbkey=Gene;gene=mfd;gene_biotype=pseudogene;locus_tag=J4731_11350;pseudo=true
JAGETS010000020.1	Protein Homology	CDS	47889	51301	.	-	0	ID=cds-J4731_11350;Parent=gene-J4731_11350;Note=frameshifted%3B internal stop;gbkey=CDS;gene=mfd;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192590.1;locus_tag=J4731_11350;product=transcription-repair coupling factor;pseudo=true;transl_table=11
JAGETS010000020.1	Genbank	pseudogene	51576	52766	.	+	.	ID=gene-J4731_11355;Name=lolC;gbkey=Gene;gene=lolC;gene_biotype=pseudogene;locus_tag=J4731_11355;pseudo=true
JAGETS010000020.1	Protein Homology	CDS	51576	52766	.	+	0	ID=cds-J4731_11355;Parent=gene-J4731_11355;Note=frameshifted;gbkey=CDS;gene=lolC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019083396.1;locus_tag=J4731_11355;product=lipoprotein-releasing ABC transporter permease subunit LolC;pseudo=true;transl_table=11
JAGETS010000020.1	Genbank	pseudogene	52759	53460	.	+	.	ID=gene-J4731_11360;Name=lolD;gbkey=Gene;gene=lolD;gene_biotype=pseudogene;locus_tag=J4731_11360;pseudo=true
JAGETS010000020.1	Protein Homology	CDS	52759	53460	.	+	0	ID=cds-J4731_11360;Parent=gene-J4731_11360;Note=frameshifted;gbkey=CDS;gene=lolD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006819511.1;locus_tag=J4731_11360;product=lipoprotein-releasing ABC transporter ATP-binding protein LolD;pseudo=true;transl_table=11
JAGETS010000020.1	Genbank	pseudogene	53453	54687	.	+	.	ID=gene-J4731_11365;Name=lolE;gbkey=Gene;gene=lolE;gene_biotype=pseudogene;locus_tag=J4731_11365;pseudo=true
JAGETS010000020.1	Protein Homology	CDS	53453	54687	.	+	0	ID=cds-J4731_11365;Parent=gene-J4731_11365;Note=frameshifted%3B internal stop;gbkey=CDS;gene=lolE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013184600.1;locus_tag=J4731_11365;product=lipoprotein-releasing ABC transporter permease subunit LolE;pseudo=true;transl_table=11
JAGETS010000020.1	Genbank	pseudogene	54765	55298	.	-	.	ID=gene-J4731_11370;Name=J4731_11370;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_11370;pseudo=true
JAGETS010000020.1	Protein Homology	CDS	54765	55298	.	-	0	ID=cds-J4731_11370;Parent=gene-J4731_11370;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004920805.1;locus_tag=J4731_11370;product=class IV adenylate cyclase;pseudo=true;transl_table=11
JAGETS010000020.1	Genbank	pseudogene	55438	55922	.	-	.	ID=gene-J4731_11375;Name=J4731_11375;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_11375;pseudo=true
JAGETS010000020.1	Protein Homology	CDS	55438	55922	.	-	0	ID=cds-J4731_11375;Parent=gene-J4731_11375;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006811956.1;locus_tag=J4731_11375;product=TIGR00645 family protein;pseudo=true;transl_table=11
JAGETS010000020.1	Genbank	pseudogene	56453	57164	.	+	.	ID=gene-J4731_11380;Name=cobB;gbkey=Gene;gene=cobB;gene_biotype=pseudogene;locus_tag=J4731_11380;pseudo=true
JAGETS010000020.1	Protein Homology	CDS	56453	57164	.	+	0	ID=cds-J4731_11380;Parent=gene-J4731_11380;Note=frameshifted;gbkey=CDS;gene=cobB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002354086.1;locus_tag=J4731_11380;product=NAD-dependent protein deacylase;pseudo=true;transl_table=11
JAGETS010000020.1	Genbank	pseudogene	57216	57914	.	-	.	ID=gene-J4731_11385;Name=J4731_11385;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_11385;pseudo=true
JAGETS010000020.1	Protein Homology	CDS	57216	57914	.	-	0	ID=cds-J4731_11385;Parent=gene-J4731_11385;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006660835.1;locus_tag=J4731_11385;product=SDR family oxidoreductase;pseudo=true;transl_table=11
JAGETS010000020.1	Genbank	pseudogene	58295	59515	.	+	.	ID=gene-J4731_11390;Name=pepT;gbkey=Gene;gene=pepT;gene_biotype=pseudogene;locus_tag=J4731_11390;pseudo=true
JAGETS010000020.1	Protein Homology	CDS	58295	59515	.	+	0	ID=cds-J4731_11390;Parent=gene-J4731_11390;Note=frameshifted;gbkey=CDS;gene=pepT;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006660836.1;locus_tag=J4731_11390;product=peptidase T;pseudo=true;transl_table=11
JAGETS010000020.1	Genbank	gene	59683	60282	.	-	.	ID=gene-J4731_11395;Name=J4731_11395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_11395
JAGETS010000020.1	Protein Homology	CDS	59683	60282	.	-	0	ID=cds-MBO1929186.1;Parent=gene-J4731_11395;Dbxref=NCBI_GP:MBO1929186.1;Name=MBO1929186.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014658194.1;locus_tag=J4731_11395;product=LysE family translocator;protein_id=MBO1929186.1;transl_table=11
JAGETS010000020.1	Genbank	pseudogene	60613	61731	.	-	.	ID=gene-J4731_11400;Name=J4731_11400;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_11400;pseudo=true
JAGETS010000020.1	Protein Homology	CDS	60613	61731	.	-	0	ID=cds-J4731_11400;Parent=gene-J4731_11400;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008500760.1;locus_tag=J4731_11400;product=cupin domain-containing protein;pseudo=true;transl_table=11
JAGETS010000020.1	Genbank	pseudogene	61993	63425	.	-	.	ID=gene-J4731_11405;Name=phoQ;gbkey=Gene;gene=phoQ;gene_biotype=pseudogene;locus_tag=J4731_11405;pseudo=true
JAGETS010000020.1	Protein Homology	CDS	61993	63425	.	-	0	ID=cds-J4731_11405;Parent=gene-J4731_11405;Note=frameshifted;gbkey=CDS;gene=phoQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015377601.1;locus_tag=J4731_11405;product=two-component system sensor histidine kinase PhoQ;pseudo=true;transl_table=11
JAGETS010000020.1	Genbank	pseudogene	63487	64090	.	-	.	ID=gene-J4731_11410;Name=phoP;gbkey=Gene;gene=phoP;gene_biotype=pseudogene;locus_tag=J4731_11410;pseudo=true
JAGETS010000020.1	Protein Homology	CDS	63487	64090	.	-	0	ID=cds-J4731_11410;Parent=gene-J4731_11410;Note=frameshifted;gbkey=CDS;gene=phoP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009635791.1;locus_tag=J4731_11410;product=two-component system response regulator PhoP;pseudo=true;transl_table=11
JAGETS010000020.1	Genbank	gene	64300	64518	.	-	.	ID=gene-J4731_11415;Name=J4731_11415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_11415
JAGETS010000020.1	GeneMarkS-2+	CDS	64300	64518	.	-	0	ID=cds-MBO1929187.1;Parent=gene-J4731_11415;Dbxref=NCBI_GP:MBO1929187.1;Name=MBO1929187.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_11415;product=hypothetical protein;protein_id=MBO1929187.1;transl_table=11
JAGETS010000020.1	Genbank	pseudogene	65264	66638	.	-	.	ID=gene-J4731_11420;Name=purB;gbkey=Gene;gene=purB;gene_biotype=pseudogene;locus_tag=J4731_11420;pseudo=true
JAGETS010000020.1	Protein Homology	CDS	65264	66638	.	-	0	ID=cds-J4731_11420;Parent=gene-J4731_11420;Note=frameshifted;gbkey=CDS;gene=purB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006709544.1;locus_tag=J4731_11420;product=adenylosuccinate lyase;pseudo=true;transl_table=11
JAGETS010000020.1	Genbank	pseudogene	66656	67219	.	-	.	ID=gene-J4731_11425;Name=hflD;gbkey=Gene;gene=hflD;gene_biotype=pseudogene;locus_tag=J4731_11425;pseudo=true
JAGETS010000020.1	Protein Homology	CDS	66656	67219	.	-	0	ID=cds-J4731_11425;Parent=gene-J4731_11425;Note=frameshifted;gbkey=CDS;gene=hflD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_024131182.1;locus_tag=J4731_11425;product=high frequency lysogenization protein HflD;pseudo=true;transl_table=11
JAGETS010000020.1	Genbank	pseudogene	67298	68336	.	-	.	ID=gene-J4731_11430;Name=mnmA;gbkey=Gene;gene=mnmA;gene_biotype=pseudogene;locus_tag=J4731_11430;pseudo=true
JAGETS010000020.1	Protein Homology	CDS	67298	68336	.	-	0	ID=cds-J4731_11430;Parent=gene-J4731_11430;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;gene=mnmA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001525316.1;locus_tag=J4731_11430;product=tRNA 2-thiouridine(34) synthase MnmA;pseudo=true;transl_table=11
JAGETS010000020.1	Genbank	pseudogene	68509	68956	.	-	.	ID=gene-J4731_11435;Name=J4731_11435;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_11435;pseudo=true
JAGETS010000020.1	Protein Homology	CDS	68509	68956	.	-	0	ID=cds-J4731_11435;Parent=gene-J4731_11435;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008910857.1;locus_tag=J4731_11435;product=NUDIX hydrolase;pseudo=true;transl_table=11
JAGETS010000020.1	Genbank	pseudogene	68949	69570	.	-	.	ID=gene-J4731_11440;Name=rluE;gbkey=Gene;gene=rluE;gene_biotype=pseudogene;locus_tag=J4731_11440;pseudo=true
JAGETS010000020.1	Protein Homology	CDS	68949	69570	.	-	0	ID=cds-J4731_11440;Parent=gene-J4731_11440;Note=frameshifted;gbkey=CDS;gene=rluE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020884455.1;locus_tag=J4731_11440;product=23S rRNA pseudouridine(2457) synthase RluE;pseudo=true;transl_table=11
JAGETS010000020.1	Genbank	pseudogene	70128	71373	.	+	.	ID=gene-J4731_11445;Name=icd;gbkey=Gene;gene=icd;gene_biotype=pseudogene;locus_tag=J4731_11445;pseudo=true
JAGETS010000020.1	Protein Homology	CDS	70128	71373	.	+	0	ID=cds-J4731_11445;Parent=gene-J4731_11445;Note=frameshifted;gbkey=CDS;gene=icd;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226321.1;locus_tag=J4731_11445;product=NADP-dependent isocitrate dehydrogenase;pseudo=true;transl_table=11
JAGETS010000020.1	Genbank	pseudogene	71522	71680	.	-	.	ID=gene-J4731_11450;Name=J4731_11450;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_11450;pseudo=true
JAGETS010000020.1	Protein Homology	CDS	71522	71680	.	-	0	ID=cds-J4731_11450;Parent=gene-J4731_11450;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017827304.1;locus_tag=J4731_11450;product=integrase;pseudo=true;transl_table=11
JAGETS010000020.1	Genbank	gene	71810	71962	.	+	.	ID=gene-J4731_11455;Name=J4731_11455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_11455
JAGETS010000020.1	Protein Homology	CDS	71810	71962	.	+	0	ID=cds-MBO1929188.1;Parent=gene-J4731_11455;Dbxref=NCBI_GP:MBO1929188.1;Name=MBO1929188.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015479.1;locus_tag=J4731_11455;product=hypothetical protein;protein_id=MBO1929188.1;transl_table=11
JAGETS010000020.1	Genbank	gene	72169	72342	.	+	.	ID=gene-J4731_11460;Name=J4731_11460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_11460
JAGETS010000020.1	GeneMarkS-2+	CDS	72169	72342	.	+	0	ID=cds-MBO1929189.1;Parent=gene-J4731_11460;Dbxref=NCBI_GP:MBO1929189.1;Name=MBO1929189.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_11460;product=hypothetical protein;protein_id=MBO1929189.1;transl_table=11
JAGETS010000020.1	Genbank	pseudogene	72838	73091	.	+	.	ID=gene-J4731_11465;Name=J4731_11465;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_11465;pseudo=true
JAGETS010000020.1	Protein Homology	CDS	72838	73091	.	+	0	ID=cds-J4731_11465;Parent=gene-J4731_11465;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014068710.1;locus_tag=J4731_11465;product=bacteriocin immunity protein;pseudo=true;transl_table=11
JAGETS010000020.1	Genbank	gene	73809	74372	.	+	.	ID=gene-J4731_11470;Name=J4731_11470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_11470
JAGETS010000020.1	GeneMarkS-2+	CDS	73809	74372	.	+	0	ID=cds-MBO1929190.1;Parent=gene-J4731_11470;Dbxref=NCBI_GP:MBO1929190.1;Name=MBO1929190.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_11470;product=hypothetical protein;protein_id=MBO1929190.1;transl_table=11
JAGETS010000020.1	Genbank	gene	75137	75364	.	+	.	ID=gene-J4731_11475;Name=J4731_11475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_11475
JAGETS010000020.1	GeneMarkS-2+	CDS	75137	75364	.	+	0	ID=cds-MBO1929191.1;Parent=gene-J4731_11475;Dbxref=NCBI_GP:MBO1929191.1;Name=MBO1929191.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_11475;product=hypothetical protein;protein_id=MBO1929191.1;transl_table=11
JAGETS010000020.1	Genbank	gene	75596	75832	.	+	.	ID=gene-J4731_11480;Name=J4731_11480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_11480
JAGETS010000020.1	GeneMarkS-2+	CDS	75596	75832	.	+	0	ID=cds-MBO1929192.1;Parent=gene-J4731_11480;Dbxref=NCBI_GP:MBO1929192.1;Name=MBO1929192.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_11480;product=hypothetical protein;protein_id=MBO1929192.1;transl_table=11
JAGETS010000020.1	Genbank	gene	76073	76411	.	+	.	ID=gene-J4731_11485;Name=J4731_11485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_11485
JAGETS010000020.1	GeneMarkS-2+	CDS	76073	76411	.	+	0	ID=cds-MBO1929193.1;Parent=gene-J4731_11485;Dbxref=NCBI_GP:MBO1929193.1;Name=MBO1929193.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_11485;product=hypothetical protein;protein_id=MBO1929193.1;transl_table=11
JAGETS010000020.1	Genbank	gene	76848	77021	.	+	.	ID=gene-J4731_11490;Name=J4731_11490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_11490
JAGETS010000020.1	GeneMarkS-2+	CDS	76848	77021	.	+	0	ID=cds-MBO1929194.1;Parent=gene-J4731_11490;Dbxref=NCBI_GP:MBO1929194.1;Name=MBO1929194.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_11490;product=hypothetical protein;protein_id=MBO1929194.1;transl_table=11
JAGETS010000020.1	Genbank	gene	77622	77768	.	-	.	ID=gene-J4731_11495;Name=J4731_11495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_11495
JAGETS010000020.1	Protein Homology	CDS	77622	77768	.	-	0	ID=cds-MBO1929195.1;Parent=gene-J4731_11495;Dbxref=NCBI_GP:MBO1929195.1;Name=MBO1929195.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013540.1;locus_tag=J4731_11495;product=helix-turn-helix transcriptional regulator;protein_id=MBO1929195.1;transl_table=11
JAGETS010000020.1	Genbank	gene	77906	78136	.	-	.	ID=gene-J4731_11500;Name=J4731_11500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_11500
JAGETS010000020.1	Protein Homology	CDS	77906	78136	.	-	0	ID=cds-MBO1929196.1;Parent=gene-J4731_11500;Dbxref=NCBI_GP:MBO1929196.1;Name=MBO1929196.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013540.1;locus_tag=J4731_11500;product=helix-turn-helix transcriptional regulator;protein_id=MBO1929196.1;transl_table=11
JAGETS010000020.1	Genbank	pseudogene	79044	79396	.	+	.	ID=gene-J4731_11505;Name=J4731_11505;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_11505;pseudo=true
JAGETS010000020.1	Protein Homology	CDS	79044	79396	.	+	0	ID=cds-J4731_11505;Parent=gene-J4731_11505;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006659239.1;locus_tag=J4731_11505;product=MmcQ/YjbR family DNA-binding protein;pseudo=true;transl_table=11
JAGETS010000020.1	Genbank	pseudogene	79442	80208	.	-	.	ID=gene-J4731_11510;Name=tam;gbkey=Gene;gene=tam;gene_biotype=pseudogene;locus_tag=J4731_11510;pseudo=true
JAGETS010000020.1	Protein Homology	CDS	79442	80208	.	-	0	ID=cds-J4731_11510;Parent=gene-J4731_11510;Note=frameshifted;gbkey=CDS;gene=tam;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004253415.1;locus_tag=J4731_11510;product=trans-aconitate 2-methyltransferase;pseudo=true;transl_table=11
JAGETS010000020.1	Genbank	pseudogene	80263	81143	.	-	.	ID=gene-J4731_11515;Name=J4731_11515;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_11515;pseudo=true
JAGETS010000020.1	Protein Homology	CDS	80263	81143	.	-	0	ID=cds-J4731_11515;Parent=gene-J4731_11515;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014657980.1;locus_tag=J4731_11515;product=PhzF family phenazine biosynthesis protein;pseudo=true;transl_table=11
JAGETS010000020.1	Genbank	pseudogene	82498	82886	.	+	.	ID=gene-J4731_11520;Name=J4731_11520;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_11520;pseudo=true
JAGETS010000020.1	Protein Homology	CDS	82498	82886	.	+	0	ID=cds-J4731_11520;Parent=gene-J4731_11520;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004253422.1;locus_tag=J4731_11520;product=nuclear transport factor 2 family protein;pseudo=true;transl_table=11
JAGETS010000020.1	Genbank	pseudogene	82968	83799	.	-	.	ID=gene-J4731_11525;Name=J4731_11525;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_11525;pseudo=true
JAGETS010000020.1	Protein Homology	CDS	82968	83799	.	-	0	ID=cds-J4731_11525;Parent=gene-J4731_11525;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006661573.1;locus_tag=J4731_11525;product=MBL fold metallo-hydrolase;pseudo=true;transl_table=11
JAGETS010000020.1	Genbank	pseudogene	84342	84619	.	-	.	ID=gene-J4731_11530;Name=J4731_11530;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_11530;pseudo=true
JAGETS010000020.1	Protein Homology	CDS	84342	84619	.	-	0	ID=cds-J4731_11530;Parent=gene-J4731_11530;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000467802.1;locus_tag=J4731_11530;product=hypothetical protein;pseudo=true;transl_table=11
JAGETS010000020.1	Genbank	gene	84594	84842	.	-	.	ID=gene-J4731_11535;Name=J4731_11535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_11535
JAGETS010000020.1	GeneMarkS-2+	CDS	84594	84842	.	-	0	ID=cds-MBO1929197.1;Parent=gene-J4731_11535;Dbxref=NCBI_GP:MBO1929197.1;Name=MBO1929197.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_11535;product=hypothetical protein;protein_id=MBO1929197.1;transl_table=11
JAGETS010000020.1	Genbank	gene	84820	85026	.	-	.	ID=gene-J4731_11540;Name=J4731_11540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_11540
JAGETS010000020.1	GeneMarkS-2+	CDS	84820	85026	.	-	0	ID=cds-MBO1929198.1;Parent=gene-J4731_11540;Dbxref=NCBI_GP:MBO1929198.1;Name=MBO1929198.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_11540;product=hypothetical protein;protein_id=MBO1929198.1;transl_table=11
JAGETS010000020.1	Genbank	gene	85078	85332	.	-	.	ID=gene-J4731_11545;Name=J4731_11545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_11545
JAGETS010000020.1	Protein Homology	CDS	85078	85332	.	-	0	ID=cds-MBO1929199.1;Parent=gene-J4731_11545;Dbxref=NCBI_GP:MBO1929199.1;Name=MBO1929199.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014281.1;locus_tag=J4731_11545;product=Tar ligand binding domain-containing protein;protein_id=MBO1929199.1;transl_table=11
JAGETS010000020.1	Genbank	gene	85307	85621	.	-	.	ID=gene-J4731_11550;Name=J4731_11550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_11550
JAGETS010000020.1	Protein Homology	CDS	85307	85621	.	-	0	ID=cds-MBO1929200.1;Parent=gene-J4731_11550;Dbxref=NCBI_GP:MBO1929200.1;Name=MBO1929200.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014281.1;locus_tag=J4731_11550;product=Tar ligand binding domain-containing protein;protein_id=MBO1929200.1;transl_table=11
JAGETS010000020.1	Genbank	pseudogene	86003	86332	.	+	.	ID=gene-J4731_11555;Name=J4731_11555;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_11555;pseudo=true
JAGETS010000020.1	Protein Homology	CDS	86003	86332	.	+	0	ID=cds-J4731_11555;Parent=gene-J4731_11555;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004253427.1;locus_tag=J4731_11555;product=GlpM family protein;pseudo=true;transl_table=11
JAGETS010000020.1	Genbank	pseudogene	86483	86874	.	+	.	ID=gene-J4731_11560;Name=J4731_11560;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_11560;pseudo=true
JAGETS010000020.1	Protein Homology	CDS	86483	86874	.	+	0	ID=cds-J4731_11560;Parent=gene-J4731_11560;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006661575.1;locus_tag=J4731_11560;product=hypothetical protein;pseudo=true;transl_table=11
JAGETS010000020.1	Genbank	pseudogene	86947	87707	.	-	.	ID=gene-J4731_11565;Name=J4731_11565;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_11565;pseudo=true
JAGETS010000020.1	Protein Homology	CDS	86947	87707	.	-	0	ID=cds-J4731_11565;Parent=gene-J4731_11565;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004252617.1;locus_tag=J4731_11565;product=class I SAM-dependent methyltransferase;pseudo=true;transl_table=11
JAGETS010000020.1	Genbank	pseudogene	87840	88264	.	-	.	ID=gene-J4731_11570;Name=J4731_11570;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_11570;pseudo=true
JAGETS010000020.1	Protein Homology	CDS	87840	88264	.	-	0	ID=cds-J4731_11570;Parent=gene-J4731_11570;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006533819.1;locus_tag=J4731_11570;product=N-acetyltransferase;pseudo=true;transl_table=11
JAGETS010000020.1	Genbank	pseudogene	88399	88737	.	+	.	ID=gene-J4731_11575;Name=J4731_11575;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_11575;pseudo=true
JAGETS010000020.1	Protein Homology	CDS	88399	88737	.	+	0	ID=cds-J4731_11575;Parent=gene-J4731_11575;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006815375.1;locus_tag=J4731_11575;product=DMT family protein;pseudo=true;transl_table=11
JAGETS010000020.1	Genbank	pseudogene	88782	89922	.	-	.	ID=gene-J4731_11580;Name=J4731_11580;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_11580;pseudo=true
JAGETS010000020.1	Protein Homology	CDS	88782	89922	.	-	0	ID=cds-J4731_11580;Parent=gene-J4731_11580;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004248208.1;locus_tag=J4731_11580;product=aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme;pseudo=true;transl_table=11
JAGETS010000020.1	Genbank	pseudogene	90168	90697	.	+	.	ID=gene-J4731_11585;Name=J4731_11585;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_11585;pseudo=true
JAGETS010000020.1	Protein Homology	CDS	90168	90697	.	+	0	ID=cds-J4731_11585;Parent=gene-J4731_11585;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009635064.1;locus_tag=J4731_11585;product=DUF1543 domain-containing protein;pseudo=true;transl_table=11
JAGETS010000020.1	Genbank	gene	91230	91481	.	-	.	ID=gene-J4731_11590;Name=J4731_11590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_11590
JAGETS010000020.1	Protein Homology	CDS	91230	91481	.	-	0	ID=cds-MBO1929201.1;Parent=gene-J4731_11590;Dbxref=NCBI_GP:MBO1929201.1;Name=MBO1929201.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008912693.1;locus_tag=J4731_11590;product=HEAT repeat domain-containing protein;protein_id=MBO1929201.1;transl_table=11
JAGETS010000020.1	Genbank	pseudogene	91765	92089	.	+	.	ID=gene-J4731_11595;Name=J4731_11595;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_11595;pseudo=true
JAGETS010000020.1	Protein Homology	CDS	91765	92089	.	+	0	ID=cds-J4731_11595;Parent=gene-J4731_11595;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006658939.1;locus_tag=J4731_11595;product=hypothetical protein;pseudo=true;transl_table=11
JAGETS010000020.1	Genbank	pseudogene	92198	92573	.	-	.	ID=gene-J4731_11600;Name=J4731_11600;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_11600;pseudo=true
JAGETS010000020.1	Protein Homology	CDS	92198	92573	.	-	0	ID=cds-J4731_11600;Parent=gene-J4731_11600;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004253459.1;locus_tag=J4731_11600;product=hypothetical protein;pseudo=true;transl_table=11
JAGETS010000020.1	Genbank	pseudogene	92939	93185	.	-	.	ID=gene-J4731_11605;Name=J4731_11605;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_11605;pseudo=true
JAGETS010000020.1	Protein Homology	CDS	92939	93185	.	-	0	ID=cds-J4731_11605;Parent=gene-J4731_11605;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004253462.1;locus_tag=J4731_11605;product=DinI-like family protein;pseudo=true;transl_table=11
JAGETS010000020.1	Genbank	pseudogene	93763	95212	.	+	.	ID=gene-J4731_11610;Name=J4731_11610;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_11610;pseudo=true
JAGETS010000020.1	Protein Homology	CDS	93763	95212	.	+	0	ID=cds-J4731_11610;Parent=gene-J4731_11610;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004920719.1;locus_tag=J4731_11610;product=sodium:alanine symporter family protein;pseudo=true;transl_table=11
JAGETS010000020.1	Genbank	pseudogene	95397	96259	.	+	.	ID=gene-J4731_11615;Name=yddG;gbkey=Gene;gene=yddG;gene_biotype=pseudogene;locus_tag=J4731_11615;pseudo=true
JAGETS010000020.1	Protein Homology	CDS	95397	96259	.	+	0	ID=cds-J4731_11615;Parent=gene-J4731_11615;Note=frameshifted;gbkey=CDS;gene=yddG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014656134.1;locus_tag=J4731_11615;product=aromatic amino acid DMT transporter YddG;pseudo=true;transl_table=11
JAGETS010000020.1	Genbank	pseudogene	96349	97157	.	-	.	ID=gene-J4731_11620;Name=yidA;gbkey=Gene;gene=yidA;gene_biotype=pseudogene;locus_tag=J4731_11620;pseudo=true
JAGETS010000020.1	Protein Homology	CDS	96349	97157	.	-	0	ID=cds-J4731_11620;Parent=gene-J4731_11620;Note=frameshifted%3B internal stop;gbkey=CDS;gene=yidA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004253474.1;locus_tag=J4731_11620;product=sugar-phosphatase;pseudo=true;transl_table=11
JAGETS010000020.1	Genbank	pseudogene	97384	97762	.	-	.	ID=gene-J4731_11625;Name=J4731_11625;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_11625;pseudo=true
JAGETS010000020.1	Protein Homology	CDS	97384	97762	.	-	0	ID=cds-J4731_11625;Parent=gene-J4731_11625;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004920708.1;locus_tag=J4731_11625;product=helix-turn-helix domain-containing protein;pseudo=true;transl_table=11
JAGETS010000020.1	Genbank	pseudogene	98094	98238	.	+	.	ID=gene-J4731_11630;Name=mgrB;gbkey=Gene;gene=mgrB;gene_biotype=pseudogene;locus_tag=J4731_11630;pseudo=true
JAGETS010000020.1	Protein Homology	CDS	98094	98238	.	+	0	ID=cds-J4731_11630;Parent=gene-J4731_11630;Note=frameshifted;gbkey=CDS;gene=mgrB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004253482.1;locus_tag=J4731_11630;product=PhoP/PhoQ regulator MgrB;pseudo=true;transl_table=11
JAGETS010000020.1	Genbank	pseudogene	98497	99797	.	+	.	ID=gene-J4731_11635;Name=J4731_11635;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_11635;pseudo=true
JAGETS010000020.1	Protein Homology	CDS	98497	99797	.	+	0	ID=cds-J4731_11635;Parent=gene-J4731_11635;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008813296.1;locus_tag=J4731_11635;product=amino acid permease;pseudo=true;transl_table=11
JAGETS010000020.1	Genbank	pseudogene	99892	100466	.	-	.	ID=gene-J4731_11640;Name=pagP;gbkey=Gene;gene=pagP;gene_biotype=pseudogene;locus_tag=J4731_11640;pseudo=true
JAGETS010000020.1	Protein Homology	CDS	99892	100466	.	-	0	ID=cds-J4731_11640;Parent=gene-J4731_11640;Note=frameshifted;gbkey=CDS;gene=pagP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006815363.1;locus_tag=J4731_11640;product=lipid IV(A) palmitoyltransferase PagP;pseudo=true;transl_table=11
JAGETS010000020.1	Genbank	pseudogene	101129	102677	.	+	.	ID=gene-J4731_11645;Name=J4731_11645;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_11645;pseudo=true
JAGETS010000020.1	Protein Homology	CDS	101129	102677	.	+	0	ID=cds-J4731_11645;Parent=gene-J4731_11645;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005182569.1;locus_tag=J4731_11645;product=YjjI family glycine radical enzyme;pseudo=true;transl_table=11
JAGETS010000020.1	Genbank	pseudogene	102649	103510	.	+	.	ID=gene-J4731_11650;Name=J4731_11650;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_11650;pseudo=true
JAGETS010000020.1	Protein Homology	CDS	102649	103510	.	+	0	ID=cds-J4731_11650;Parent=gene-J4731_11650;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463421.1;locus_tag=J4731_11650;product=YjjW family glycine radical enzyme activase;pseudo=true;transl_table=11
JAGETS010000020.1	Genbank	pseudogene	103700	104493	.	+	.	ID=gene-J4731_11655;Name=thiD;gbkey=Gene;gene=thiD;gene_biotype=pseudogene;locus_tag=J4731_11655;pseudo=true
JAGETS010000020.1	Protein Homology	CDS	103700	104493	.	+	0	ID=cds-J4731_11655;Parent=gene-J4731_11655;Note=frameshifted;gbkey=CDS;gene=thiD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004250817.1;locus_tag=J4731_11655;product=bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase;pseudo=true;transl_table=11
JAGETS010000020.1	Genbank	pseudogene	104539	105434	.	-	.	ID=gene-J4731_11660;Name=yegS;gbkey=Gene;gene=yegS;gene_biotype=pseudogene;locus_tag=J4731_11660;pseudo=true
JAGETS010000020.1	Protein Homology	CDS	104539	105434	.	-	0	ID=cds-J4731_11660;Parent=gene-J4731_11660;Note=frameshifted;gbkey=CDS;gene=yegS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004253508.1;locus_tag=J4731_11660;product=lipid kinase YegS;pseudo=true;transl_table=11
JAGETS010000020.1	Genbank	pseudogene	105893	107222	.	-	.	ID=gene-J4731_11665;Name=yegQ;gbkey=Gene;gene=yegQ;gene_biotype=pseudogene;locus_tag=J4731_11665;pseudo=true
JAGETS010000020.1	Protein Homology	CDS	105893	107222	.	-	0	ID=cds-J4731_11665;Parent=gene-J4731_11665;Note=frameshifted;gbkey=CDS;gene=yegQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006658922.1;locus_tag=J4731_11665;product=tRNA 5-hydroxyuridine modification protein YegQ;pseudo=true;transl_table=11
JAGETS010000020.1	Genbank	pseudogene	107394	108098	.	-	.	ID=gene-J4731_11670;Name=baeR;gbkey=Gene;gene=baeR;gene_biotype=pseudogene;locus_tag=J4731_11670;pseudo=true
JAGETS010000020.1	Protein Homology	CDS	107394	108098	.	-	0	ID=cds-J4731_11670;Parent=gene-J4731_11670;Note=frameshifted;gbkey=CDS;gene=baeR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013509766.1;locus_tag=J4731_11670;product=two-component system response regulator BaeR;pseudo=true;transl_table=11
JAGETS010000020.1	Genbank	pseudogene	108101	109472	.	-	.	ID=gene-J4731_11675;Name=baeS;gbkey=Gene;gene=baeS;gene_biotype=pseudogene;locus_tag=J4731_11675;pseudo=true
JAGETS010000020.1	Protein Homology	CDS	108101	109472	.	-	0	ID=cds-J4731_11675;Parent=gene-J4731_11675;Note=frameshifted;gbkey=CDS;gene=baeS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004253515.1;locus_tag=J4731_11675;product=two-component system sensor histidine kinase BaeS;pseudo=true;transl_table=11
JAGETS010000020.1	Genbank	pseudogene	109497	112557	.	-	.	ID=gene-J4731_11680;Name=mdtC;gbkey=Gene;gene=mdtC;gene_biotype=pseudogene;locus_tag=J4731_11680;pseudo=true
JAGETS010000020.1	Protein Homology	CDS	109497	112557	.	-	0	ID=cds-J4731_11680;Parent=gene-J4731_11680;Note=frameshifted;gbkey=CDS;gene=mdtC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010847425.1;locus_tag=J4731_11680;product=multidrug efflux RND transporter permease subunit MdtC;pseudo=true;transl_table=11
JAGETS010000020.1	Genbank	pseudogene	112514	115613	.	-	.	ID=gene-J4731_11685;Name=J4731_11685;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_11685;pseudo=true
JAGETS010000020.1	Protein Homology	CDS	112514	115613	.	-	0	ID=cds-J4731_11685;Parent=gene-J4731_11685;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010847426.1;locus_tag=J4731_11685;product=MdtB/MuxB family multidrug efflux RND transporter permease subunit;pseudo=true;transl_table=11
JAGETS010000020.1	Genbank	pseudogene	115603	116687	.	-	.	ID=gene-J4731_11690;Name=J4731_11690;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_11690;pseudo=true
JAGETS010000020.1	Protein Homology	CDS	115603	116687	.	-	0	ID=cds-J4731_11690;Parent=gene-J4731_11690;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004571273.1;locus_tag=J4731_11690;product=MdtA/MuxA family multidrug efflux RND transporter periplasmic adaptor subunit;pseudo=true;transl_table=11
JAGETS010000020.1	Genbank	pseudogene	117077	118407	.	-	.	ID=gene-J4731_11695;Name=J4731_11695;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_11695;pseudo=true
JAGETS010000020.1	Protein Homology	CDS	117077	118407	.	-	0	ID=cds-J4731_11695;Parent=gene-J4731_11695;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006658915.1;locus_tag=J4731_11695;product=MFS transporter;pseudo=true;transl_table=11
JAGETS010000020.1	Genbank	pseudogene	118990	120440	.	-	.	ID=gene-J4731_11700;Name=mgtE;gbkey=Gene;gene=mgtE;gene_biotype=pseudogene;locus_tag=J4731_11700;pseudo=true
JAGETS010000020.1	Protein Homology	CDS	118990	120440	.	-	0	ID=cds-J4731_11700;Parent=gene-J4731_11700;Note=frameshifted;gbkey=CDS;gene=mgtE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004920674.1;locus_tag=J4731_11700;product=magnesium transporter;pseudo=true;transl_table=11
JAGETS010000020.1	Genbank	pseudogene	120626	122143	.	-	.	ID=gene-J4731_11705;Name=J4731_11705;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_11705;pseudo=true
JAGETS010000020.1	Protein Homology	CDS	120626	122143	.	-	0	ID=cds-J4731_11705;Parent=gene-J4731_11705;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006316924.1;locus_tag=J4731_11705;product=exopolyphosphatase;pseudo=true;transl_table=11
JAGETS010000020.1	Genbank	pseudogene	122147	124205	.	-	.	ID=gene-J4731_11710;Name=ppk1;gbkey=Gene;gene=ppk1;gene_biotype=pseudogene;locus_tag=J4731_11710;pseudo=true
JAGETS010000020.1	Protein Homology	CDS	122147	124205	.	-	0	ID=cds-J4731_11710;Parent=gene-J4731_11710;Note=frameshifted;gbkey=CDS;gene=ppk1;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016266417.1;locus_tag=J4731_11710;product=polyphosphate kinase 1;pseudo=true;transl_table=11
JAGETS010000020.1	Genbank	gene	124260	124847	.	-	.	ID=gene-J4731_11715;Name=speG;gbkey=Gene;gene=speG;gene_biotype=protein_coding;locus_tag=J4731_11715
JAGETS010000020.1	Protein Homology	CDS	124260	124847	.	-	0	ID=cds-MBO1929202.1;Parent=gene-J4731_11715;Dbxref=NCBI_GP:MBO1929202.1;Name=MBO1929202.1;gbkey=CDS;gene=speG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004243436.1;locus_tag=J4731_11715;product=spermidine N1-acetyltransferase;protein_id=MBO1929202.1;transl_table=11
JAGETS010000020.1	Genbank	pseudogene	125082	125717	.	-	.	ID=gene-J4731_11720;Name=purN;gbkey=Gene;gene=purN;gene_biotype=pseudogene;locus_tag=J4731_11720;pseudo=true
JAGETS010000020.1	Protein Homology	CDS	125082	125717	.	-	0	ID=cds-J4731_11720;Parent=gene-J4731_11720;Note=frameshifted;gbkey=CDS;gene=purN;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004391279.1;locus_tag=J4731_11720;product=phosphoribosylglycinamide formyltransferase;pseudo=true;transl_table=11
JAGETS010000020.1	Genbank	pseudogene	125725	126742	.	-	.	ID=gene-J4731_11725;Name=purM;gbkey=Gene;gene=purM;gene_biotype=pseudogene;locus_tag=J4731_11725;pseudo=true
JAGETS010000020.1	Protein Homology	CDS	125725	126742	.	-	0	ID=cds-J4731_11725;Parent=gene-J4731_11725;Note=frameshifted;gbkey=CDS;gene=purM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012440802.1;locus_tag=J4731_11725;product=phosphoribosylformylglycinamidine cyclo-ligase;pseudo=true;transl_table=11
JAGETS010000020.1	Genbank	pseudogene	127136	127742	.	+	.	ID=gene-J4731_11730;Name=upp;gbkey=Gene;gene=upp;gene_biotype=pseudogene;locus_tag=J4731_11730;pseudo=true
JAGETS010000020.1	Protein Homology	CDS	127136	127742	.	+	0	ID=cds-J4731_11730;Parent=gene-J4731_11730;Note=frameshifted;gbkey=CDS;gene=upp;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001295473.1;locus_tag=J4731_11730;product=uracil phosphoribosyltransferase;pseudo=true;transl_table=11
JAGETS010000020.1	Genbank	pseudogene	127803	129041	.	+	.	ID=gene-J4731_11735;Name=uraA;gbkey=Gene;gene=uraA;gene_biotype=pseudogene;locus_tag=J4731_11735;pseudo=true
JAGETS010000020.1	Protein Homology	CDS	127803	129041	.	+	0	ID=cds-J4731_11735;Parent=gene-J4731_11735;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;gene=uraA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708335.2;locus_tag=J4731_11735;product=uracil permease;pseudo=true;transl_table=11
JAGETS010000020.1	Genbank	pseudogene	129215	129906	.	+	.	ID=gene-J4731_11740;Name=hda;gbkey=Gene;gene=hda;gene_biotype=pseudogene;locus_tag=J4731_11740;pseudo=true
JAGETS010000020.1	Protein Homology	CDS	129215	129906	.	+	0	ID=cds-J4731_11740;Parent=gene-J4731_11740;Note=frameshifted;gbkey=CDS;gene=hda;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012847954.1;locus_tag=J4731_11740;product=DnaA inactivator Hda;pseudo=true;transl_table=11
JAGETS010000020.1	Genbank	pseudogene	129958	130313	.	-	.	ID=gene-J4731_11745;Name=arsC;gbkey=Gene;gene=arsC;gene_biotype=pseudogene;locus_tag=J4731_11745;pseudo=true
JAGETS010000020.1	Protein Homology	CDS	129958	130313	.	-	0	ID=cds-J4731_11745;Parent=gene-J4731_11745;Note=This arsenate reductase requires both glutathione and glutaredoxin to convert arsenate to arsenite%2C after which the efflux transporter formed by ArsA and ArsB can extrude the arsenite from the cell%2C providing resistance.%3B frameshifted;gbkey=CDS;gene=arsC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005172378.1;locus_tag=J4731_11745;product=arsenate reductase (glutaredoxin);pseudo=true;transl_table=11
JAGETS010000020.1	Genbank	pseudogene	130313	131771	.	-	.	ID=gene-J4731_11750;Name=J4731_11750;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_11750;pseudo=true
JAGETS010000020.1	Protein Homology	CDS	130313	131771	.	-	0	ID=cds-J4731_11750;Parent=gene-J4731_11750;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000489630.1;locus_tag=J4731_11750;product=M48 family metallopeptidase;pseudo=true;transl_table=11
JAGETS010000020.1	Genbank	pseudogene	131967	132955	.	+	.	ID=gene-J4731_11755;Name=J4731_11755;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_11755;pseudo=true
JAGETS010000020.1	Protein Homology	CDS	131967	132955	.	+	0	ID=cds-J4731_11755;Parent=gene-J4731_11755;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461428.1;locus_tag=J4731_11755;product=AI-2E family transporter;pseudo=true;transl_table=11
JAGETS010000020.1	Genbank	pseudogene	133061	133496	.	-	.	ID=gene-J4731_11760;Name=bcp;gbkey=Gene;gene=bcp;gene_biotype=pseudogene;locus_tag=J4731_11760;pseudo=true
JAGETS010000020.1	Protein Homology	CDS	133061	133496	.	-	0	ID=cds-J4731_11760;Parent=gene-J4731_11760;Note=frameshifted%3B internal stop;gbkey=CDS;gene=bcp;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004920623.1;locus_tag=J4731_11760;product=thioredoxin-dependent thiol peroxidase;pseudo=true;transl_table=11
JAGETS010000020.1	Genbank	pseudogene	133594	134095	.	-	.	ID=gene-J4731_11765;Name=gcvR;gbkey=Gene;gene=gcvR;gene_biotype=pseudogene;locus_tag=J4731_11765;pseudo=true
JAGETS010000020.1	Protein Homology	CDS	133594	134095	.	-	0	ID=cds-J4731_11765;Parent=gene-J4731_11765;Note=negative transcriptional regulator of the gcvTHP operon%3B frameshifted;gbkey=CDS;gene=gcvR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012764693.1;locus_tag=J4731_11765;product=glycine cleavage system transcriptional repressor;pseudo=true;transl_table=11
JAGETS010000020.1	Genbank	pseudogene	134370	135269	.	+	.	ID=gene-J4731_11770;Name=dapA;gbkey=Gene;gene=dapA;gene_biotype=pseudogene;locus_tag=J4731_11770;pseudo=true
JAGETS010000020.1	Protein Homology	CDS	134370	135269	.	+	0	ID=cds-J4731_11770;Parent=gene-J4731_11770;Note=frameshifted%3B internal stop;gbkey=CDS;gene=dapA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004253550.1;locus_tag=J4731_11770;product=4-hydroxy-tetrahydrodipicolinate synthase;pseudo=true;transl_table=11
JAGETS010000020.1	Genbank	pseudogene	135286	136325	.	+	.	ID=gene-J4731_11775;Name=bamC;gbkey=Gene;gene=bamC;gene_biotype=pseudogene;locus_tag=J4731_11775;pseudo=true
JAGETS010000020.1	Protein Homology	CDS	135286	136325	.	+	0	ID=cds-J4731_11775;Parent=gene-J4731_11775;Note=frameshifted%3B internal stop;gbkey=CDS;gene=bamC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010847444.1;locus_tag=J4731_11775;product=outer membrane protein assembly factor BamC;pseudo=true;transl_table=11
JAGETS010000020.1	Genbank	pseudogene	136527	137166	.	+	.	ID=gene-J4731_11780;Name=J4731_11780;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_11780;pseudo=true
JAGETS010000020.1	Protein Homology	CDS	136527	137166	.	+	0	ID=cds-J4731_11780;Parent=gene-J4731_11780;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000856391.1;locus_tag=J4731_11780;product=hypothetical protein;pseudo=true;transl_table=11
JAGETS010000020.1	Genbank	pseudogene	137583	138275	.	+	.	ID=gene-J4731_11785;Name=purC;gbkey=Gene;gene=purC;gene_biotype=pseudogene;locus_tag=J4731_11785;pseudo=true
JAGETS010000020.1	Protein Homology	CDS	137583	138275	.	+	0	ID=cds-J4731_11785;Parent=gene-J4731_11785;Note=frameshifted;gbkey=CDS;gene=purC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012847962.1;locus_tag=J4731_11785;product=phosphoribosylaminoimidazolesuccinocarboxamide synthase;pseudo=true;transl_table=11
JAGETS010000020.1	Genbank	pseudogene	138517	139146	.	-	.	ID=gene-J4731_11790;Name=J4731_11790;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_11790;pseudo=true
JAGETS010000020.1	Protein Homology	CDS	138517	139146	.	-	0	ID=cds-J4731_11790;Parent=gene-J4731_11790;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000956862.1;locus_tag=J4731_11790;product=ATP-binding cassette domain-containing protein;pseudo=true;transl_table=11
JAGETS010000020.1	Genbank	gene	139133	139309	.	-	.	ID=gene-J4731_11795;Name=J4731_11795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_11795
JAGETS010000020.1	GeneMarkS-2+	CDS	139133	139309	.	-	0	ID=cds-MBO1929203.1;Parent=gene-J4731_11795;Dbxref=NCBI_GP:MBO1929203.1;Name=MBO1929203.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_11795;product=hypothetical protein;protein_id=MBO1929203.1;transl_table=11
JAGETS010000020.1	Genbank	gene	139341	139745	.	-	.	ID=gene-J4731_11800;Name=J4731_11800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_11800
JAGETS010000020.1	Protein Homology	CDS	139341	139745	.	-	0	ID=cds-MBO1929204.1;Parent=gene-J4731_11800;Dbxref=NCBI_GP:MBO1929204.1;Name=MBO1929204.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010868935.1;locus_tag=J4731_11800;product=energy-coupling factor ABC transporter ATP-binding protein;protein_id=MBO1929204.1;transl_table=11
JAGETS010000020.1	Genbank	pseudogene	139983	140514	.	-	.	ID=gene-J4731_11805;Name=J4731_11805;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_11805;pseudo=true
JAGETS010000020.1	Protein Homology	CDS	139983	140514	.	-	0	ID=cds-J4731_11805;Parent=gene-J4731_11805;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004253556.1;locus_tag=J4731_11805;product=energy-coupling factor transporter transmembrane protein EcfT;pseudo=true;transl_table=11
JAGETS010000020.1	Genbank	pseudogene	140680	140918	.	-	.	ID=gene-J4731_11810;Name=J4731_11810;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_11810;pseudo=true
JAGETS010000020.1	Protein Homology	CDS	140680	140918	.	-	0	ID=cds-J4731_11810;Parent=gene-J4731_11810;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006815332.1;locus_tag=J4731_11810;product=hypothetical protein;pseudo=true;transl_table=11
JAGETS010000020.1	Genbank	pseudogene	141332	141717	.	-	.	ID=gene-J4731_11815;Name=J4731_11815;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_11815;pseudo=true
JAGETS010000020.1	Protein Homology	CDS	141332	141717	.	-	0	ID=cds-J4731_11815;Parent=gene-J4731_11815;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006686860.1;locus_tag=J4731_11815;product=DUF296 domain-containing protein;pseudo=true;transl_table=11
JAGETS010000020.1	Genbank	pseudogene	142332	142786	.	+	.	ID=gene-J4731_11820;Name=J4731_11820;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_11820;pseudo=true
JAGETS010000020.1	Protein Homology	CDS	142332	142786	.	+	0	ID=cds-J4731_11820;Parent=gene-J4731_11820;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006533030.1;locus_tag=J4731_11820;product=DUF441 domain-containing protein;pseudo=true;transl_table=11
JAGETS010000020.1	Genbank	pseudogene	142794	144767	.	+	.	ID=gene-J4731_11825;Name=J4731_11825;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_11825;pseudo=true
JAGETS010000020.1	Protein Homology	CDS	142794	144767	.	+	0	ID=cds-J4731_11825;Parent=gene-J4731_11825;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004253574.1;locus_tag=J4731_11825;product=tRNA(Met) cytidine acetyltransferase;pseudo=true;transl_table=11
JAGETS010000020.1	Genbank	pseudogene	145425	145826	.	+	.	ID=gene-J4731_11830;Name=J4731_11830;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_11830;pseudo=true
JAGETS010000020.1	Protein Homology	CDS	145425	145826	.	+	0	ID=cds-J4731_11830;Parent=gene-J4731_11830;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002438067.1;locus_tag=J4731_11830;product=DUF454 family protein;pseudo=true;transl_table=11
JAGETS010000020.1	Genbank	pseudogene	145853	146515	.	-	.	ID=gene-J4731_11835;Name=J4731_11835;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_11835;pseudo=true
JAGETS010000020.1	Protein Homology	CDS	145853	146515	.	-	0	ID=cds-J4731_11835;Parent=gene-J4731_11835;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017628039.1;locus_tag=J4731_11835;product=M15 family metallopeptidase;pseudo=true;transl_table=11
JAGETS010000020.1	Genbank	pseudogene	146512	147628	.	-	.	ID=gene-J4731_11840;Name=dapE;gbkey=Gene;gene=dapE;gene_biotype=pseudogene;locus_tag=J4731_11840;pseudo=true
JAGETS010000020.1	Protein Homology	CDS	146512	147628	.	-	0	ID=cds-J4731_11840;Parent=gene-J4731_11840;Note=frameshifted;gbkey=CDS;gene=dapE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004920549.1;locus_tag=J4731_11840;product=succinyl-diaminopimelate desuccinylase;pseudo=true;transl_table=11
JAGETS010000020.1	Genbank	pseudogene	147642	147979	.	-	.	ID=gene-J4731_11845;Name=J4731_11845;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_11845;pseudo=true
JAGETS010000020.1	Protein Homology	CDS	147642	147979	.	-	0	ID=cds-J4731_11845;Parent=gene-J4731_11845;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004253591.1;locus_tag=J4731_11845;product=ArsC family reductase;pseudo=true;transl_table=11
JAGETS010000020.1	Genbank	pseudogene	148153	148767	.	-	.	ID=gene-J4731_11850;Name=J4731_11850;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_11850;pseudo=true
JAGETS010000020.1	Protein Homology	CDS	148153	148767	.	-	0	ID=cds-J4731_11850;Parent=gene-J4731_11850;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006661615.1;locus_tag=J4731_11850;product=response regulator;pseudo=true;transl_table=11
JAGETS010000020.1	Genbank	pseudogene	149296	151541	.	+	.	ID=gene-J4731_11855;Name=J4731_11855;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_11855;pseudo=true
JAGETS010000020.1	Protein Homology	CDS	149296	151541	.	+	0	ID=cds-J4731_11855;Parent=gene-J4731_11855;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708302.1;locus_tag=J4731_11855;product=NADP-dependent malic enzyme;pseudo=true;transl_table=11
JAGETS010000020.1	Genbank	pseudogene	151647	152518	.	+	.	ID=gene-J4731_11860;Name=J4731_11860;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_11860;pseudo=true
JAGETS010000020.1	Protein Homology	CDS	151647	152518	.	+	0	ID=cds-J4731_11860;Parent=gene-J4731_11860;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004920537.1;locus_tag=J4731_11860;product=ChaN family lipoprotein;pseudo=true;transl_table=11
JAGETS010000020.1	Genbank	pseudogene	152661	153359	.	+	.	ID=gene-J4731_11865;Name=J4731_11865;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_11865;pseudo=true
JAGETS010000020.1	Protein Homology	CDS	152661	153359	.	+	0	ID=cds-J4731_11865;Parent=gene-J4731_11865;Note=frameshifted%3B incomplete%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004253601.1;locus_tag=J4731_11865;product=energy transducer TonB;pseudo=true;transl_table=11
##sequence-region JAGETS010000021.1 1 93948
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=587
JAGETS010000021.1	Genbank	region	1	93948	.	+	.	ID=JAGETS010000021.1:1..93948;Dbxref=taxon:587;collected-by=NHLS;collection-date=2018;country=South Africa: Pretoria;gbkey=Src;isolation-source=stool;lat-lon=25.7479 S 28.2293 E;mol_type=genomic DNA;nat-host=porcine;strain=SG003
JAGETS010000021.1	Genbank	pseudogene	418	993	.	-	.	ID=gene-J4731_11870;Name=J4731_11870;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_11870;pseudo=true
JAGETS010000021.1	Protein Homology	CDS	418	993	.	-	0	ID=cds-J4731_11870;Parent=gene-J4731_11870;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011144777.1;locus_tag=J4731_11870;product=YihA family ribosome biogenesis GTP-binding protein;pseudo=true;transl_table=11
JAGETS010000021.1	Genbank	pseudogene	1314	1880	.	+	.	ID=gene-J4731_11875;Name=ppiA;gbkey=Gene;gene=ppiA;gene_biotype=pseudogene;gene_synonym=rotA;locus_tag=J4731_11875;pseudo=true
JAGETS010000021.1	Protein Homology	CDS	1314	1880	.	+	0	ID=cds-J4731_11875;Parent=gene-J4731_11875;Note=frameshifted;gbkey=CDS;gene=ppiA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004923818.1;locus_tag=J4731_11875;product=peptidylprolyl isomerase A;pseudo=true;transl_table=11
JAGETS010000021.1	Genbank	gene	2308	2883	.	+	.	ID=gene-J4731_11880;Name=J4731_11880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_11880
JAGETS010000021.1	Protein Homology	CDS	2308	2883	.	+	0	ID=cds-MBO1929205.1;Parent=gene-J4731_11880;Dbxref=NCBI_GP:MBO1929205.1;Name=MBO1929205.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004262565.1;locus_tag=J4731_11880;product=aminodeoxychorismate synthase component II;protein_id=MBO1929205.1;transl_table=11
JAGETS010000021.1	Genbank	pseudogene	3011	4236	.	+	.	ID=gene-J4731_11885;Name=J4731_11885;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_11885;pseudo=true
JAGETS010000021.1	Protein Homology	CDS	3011	4236	.	+	0	ID=cds-J4731_11885;Parent=gene-J4731_11885;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004262562.1;locus_tag=J4731_11885;product=aspartate aminotransferase family protein;pseudo=true;transl_table=11
JAGETS010000021.1	Genbank	gene	5016	5282	.	-	.	ID=gene-J4731_11890;Name=J4731_11890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_11890
JAGETS010000021.1	GeneMarkS-2+	CDS	5016	5282	.	-	0	ID=cds-MBO1929206.1;Parent=gene-J4731_11890;Dbxref=NCBI_GP:MBO1929206.1;Name=MBO1929206.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_11890;product=hypothetical protein;protein_id=MBO1929206.1;transl_table=11
JAGETS010000021.1	Genbank	gene	5737	6084	.	-	.	ID=gene-J4731_11895;Name=J4731_11895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_11895
JAGETS010000021.1	GeneMarkS-2+	CDS	5737	6084	.	-	0	ID=cds-MBO1929207.1;Parent=gene-J4731_11895;Dbxref=NCBI_GP:MBO1929207.1;Name=MBO1929207.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_11895;product=hypothetical protein;protein_id=MBO1929207.1;transl_table=11
JAGETS010000021.1	Genbank	pseudogene	6843	7473	.	-	.	ID=gene-J4731_11900;Name=crp;gbkey=Gene;gene=crp;gene_biotype=pseudogene;locus_tag=J4731_11900;pseudo=true
JAGETS010000021.1	Protein Homology	CDS	6843	7473	.	-	0	ID=cds-J4731_11900;Parent=gene-J4731_11900;Note=frameshifted%3B internal stop;gbkey=CDS;gene=crp;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016506431.1;locus_tag=J4731_11900;product=cAMP-activated global transcriptional regulator CRP;pseudo=true;transl_table=11
JAGETS010000021.1	Genbank	pseudogene	7826	8242	.	+	.	ID=gene-J4731_11905;Name=J4731_11905;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_11905;pseudo=true
JAGETS010000021.1	Protein Homology	CDS	7826	8242	.	+	0	ID=cds-J4731_11905;Parent=gene-J4731_11905;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004386596.1;locus_tag=J4731_11905;product=OsmC family protein;pseudo=true;transl_table=11
JAGETS010000021.1	Genbank	pseudogene	8295	9168	.	-	.	ID=gene-J4731_11910;Name=J4731_11910;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_11910;pseudo=true
JAGETS010000021.1	Protein Homology	CDS	8295	9168	.	-	0	ID=cds-J4731_11910;Parent=gene-J4731_11910;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006813716.1;locus_tag=J4731_11910;product=phosphoribulokinase;pseudo=true;transl_table=11
JAGETS010000021.1	Genbank	pseudogene	9362	9524	.	-	.	ID=gene-J4731_11915;Name=J4731_11915;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_11915;pseudo=true
JAGETS010000021.1	Protein Homology	CDS	9362	9524	.	-	0	ID=cds-J4731_11915;Parent=gene-J4731_11915;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246876.1;locus_tag=J4731_11915;product=YheU family protein;pseudo=true;transl_table=11
JAGETS010000021.1	Genbank	pseudogene	9521	10394	.	-	.	ID=gene-J4731_11920;Name=J4731_11920;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_11920;pseudo=true
JAGETS010000021.1	Protein Homology	CDS	9521	10394	.	-	0	ID=cds-J4731_11920;Parent=gene-J4731_11920;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001567045.1;locus_tag=J4731_11920;product=hydrolase;pseudo=true;transl_table=11
JAGETS010000021.1	Genbank	pseudogene	10543	11109	.	+	.	ID=gene-J4731_11925;Name=J4731_11925;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_11925;pseudo=true
JAGETS010000021.1	Protein Homology	CDS	10543	11109	.	+	0	ID=cds-J4731_11925;Parent=gene-J4731_11925;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012368518.1;locus_tag=J4731_11925;product=LysE family translocator;pseudo=true;transl_table=11
JAGETS010000021.1	Genbank	pseudogene	11175	12604	.	-	.	ID=gene-J4731_11930;Name=murP;gbkey=Gene;gene=murP;gene_biotype=pseudogene;locus_tag=J4731_11930;pseudo=true
JAGETS010000021.1	Protein Homology	CDS	11175	12604	.	-	0	ID=cds-J4731_11930;Parent=gene-J4731_11930;Note=frameshifted;gbkey=CDS;gene=murP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006659543.1;locus_tag=J4731_11930;product=PTS N-acetylmuramic acid transporter subunit IIBC;pseudo=true;transl_table=11
JAGETS010000021.1	Genbank	pseudogene	12606	13532	.	-	.	ID=gene-J4731_11935;Name=murQ;gbkey=Gene;gene=murQ;gene_biotype=pseudogene;locus_tag=J4731_11935;pseudo=true
JAGETS010000021.1	Protein Homology	CDS	12606	13532	.	-	0	ID=cds-J4731_11935;Parent=gene-J4731_11935;Note=frameshifted;gbkey=CDS;gene=murQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008460866.1;locus_tag=J4731_11935;product=N-acetylmuramic acid 6-phosphate etherase;pseudo=true;transl_table=11
JAGETS010000021.1	Genbank	pseudogene	13787	14635	.	+	.	ID=gene-J4731_11940;Name=J4731_11940;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_11940;pseudo=true
JAGETS010000021.1	Protein Homology	CDS	13787	14635	.	+	0	ID=cds-J4731_11940;Parent=gene-J4731_11940;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019082256.1;locus_tag=J4731_11940;product=SIS domain-containing protein;pseudo=true;transl_table=11
JAGETS010000021.1	Genbank	pseudogene	14740	17017	.	+	.	ID=gene-J4731_11945;Name=adiA;gbkey=Gene;gene=adiA;gene_biotype=pseudogene;locus_tag=J4731_11945;pseudo=true
JAGETS010000021.1	Protein Homology	CDS	14740	17017	.	+	0	ID=cds-J4731_11945;Parent=gene-J4731_11945;Note=frameshifted%3B internal stop;gbkey=CDS;gene=adiA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004923888.1;locus_tag=J4731_11945;product=arginine decarboxylase;pseudo=true;transl_table=11
JAGETS010000021.1	Genbank	pseudogene	17063	18942	.	-	.	ID=gene-J4731_11950;Name=J4731_11950;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_11950;pseudo=true
JAGETS010000021.1	Protein Homology	CDS	17063	18942	.	-	0	ID=cds-J4731_11950;Parent=gene-J4731_11950;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010848527.1;locus_tag=J4731_11950;product=ABC transporter ATP-binding protein;pseudo=true;transl_table=11
JAGETS010000021.1	Genbank	pseudogene	19159	19726	.	+	.	ID=gene-J4731_11955;Name=kefG;gbkey=Gene;gene=kefG;gene_biotype=pseudogene;locus_tag=J4731_11955;pseudo=true
JAGETS010000021.1	Protein Homology	CDS	19159	19726	.	+	0	ID=cds-J4731_11955;Parent=gene-J4731_11955;Note=frameshifted;gbkey=CDS;gene=kefG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004249118.1;locus_tag=J4731_11955;product=glutathione-regulated potassium-efflux system ancillary protein KefG;pseudo=true;transl_table=11
JAGETS010000021.1	Genbank	pseudogene	19704	21479	.	+	.	ID=gene-J4731_11960;Name=kefB;gbkey=Gene;gene=kefB;gene_biotype=pseudogene;locus_tag=J4731_11960;pseudo=true
JAGETS010000021.1	Protein Homology	CDS	19704	21479	.	+	0	ID=cds-J4731_11960;Parent=gene-J4731_11960;Note=frameshifted%3B internal stop;gbkey=CDS;gene=kefB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006659535.1;locus_tag=J4731_11960;product=glutathione-regulated potassium-efflux system protein KefB;pseudo=true;transl_table=11
JAGETS010000021.1	Genbank	gene	21489	21632	.	+	.	ID=gene-J4731_11965;Name=J4731_11965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_11965
JAGETS010000021.1	Protein Homology	CDS	21489	21632	.	+	0	ID=cds-MBO1929208.1;Parent=gene-J4731_11965;Dbxref=NCBI_GP:MBO1929208.1;Name=MBO1929208.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006534684.1;locus_tag=J4731_11965;product=YheV family putative metal-binding protein;protein_id=MBO1929208.1;transl_table=11
JAGETS010000021.1	Genbank	pseudogene	21720	22390	.	+	.	ID=gene-J4731_11970;Name=slyD;gbkey=Gene;gene=slyD;gene_biotype=pseudogene;locus_tag=J4731_11970;pseudo=true
JAGETS010000021.1	Protein Homology	CDS	21720	22390	.	+	0	ID=cds-J4731_11970;Parent=gene-J4731_11970;Note=frameshifted;gbkey=CDS;gene=slyD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000861342.1;locus_tag=J4731_11970;product=peptidylprolyl isomerase;pseudo=true;transl_table=11
JAGETS010000021.1	Genbank	gene	22445	22666	.	-	.	ID=gene-J4731_11975;Name=J4731_11975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_11975
JAGETS010000021.1	Protein Homology	CDS	22445	22666	.	-	0	ID=cds-MBO1929209.1;Parent=gene-J4731_11975;Dbxref=NCBI_GP:MBO1929209.1;Name=MBO1929209.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006659531.1;locus_tag=J4731_11975;product=SlyX family protein;protein_id=MBO1929209.1;transl_table=11
JAGETS010000021.1	Genbank	pseudogene	22912	23635	.	+	.	ID=gene-J4731_11980;Name=fkpA;gbkey=Gene;gene=fkpA;gene_biotype=pseudogene;locus_tag=J4731_11980;pseudo=true
JAGETS010000021.1	Protein Homology	CDS	22912	23635	.	+	0	ID=cds-J4731_11980;Parent=gene-J4731_11980;Note=frameshifted%3B internal stop;gbkey=CDS;gene=fkpA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020322793.1;locus_tag=J4731_11980;product=FKBP-type peptidyl-prolyl cis-trans isomerase;pseudo=true;transl_table=11
JAGETS010000021.1	Genbank	gene	23929	24633	.	+	.	ID=gene-J4731_11985;Name=J4731_11985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_11985
JAGETS010000021.1	Protein Homology	CDS	23929	24633	.	+	0	ID=cds-MBO1929210.1;Parent=gene-J4731_11985;Dbxref=NCBI_GP:MBO1929210.1;Name=MBO1929210.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008815470.1;locus_tag=J4731_11985;product=transcriptional regulator;protein_id=MBO1929210.1;transl_table=11
JAGETS010000021.1	Genbank	pseudogene	24644	25025	.	+	.	ID=gene-J4731_11990;Name=tusD;gbkey=Gene;gene=tusD;gene_biotype=pseudogene;locus_tag=J4731_11990;pseudo=true
JAGETS010000021.1	Protein Homology	CDS	24644	25025	.	+	0	ID=cds-J4731_11990;Parent=gene-J4731_11990;Note=frameshifted%3B internal stop;gbkey=CDS;gene=tusD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015379269.1;locus_tag=J4731_11990;product=sulfurtransferase complex subunit TusD;pseudo=true;transl_table=11
JAGETS010000021.1	Genbank	pseudogene	25077	25403	.	+	.	ID=gene-J4731_11995;Name=tusC;gbkey=Gene;gene=tusC;gene_biotype=pseudogene;locus_tag=J4731_11995;pseudo=true
JAGETS010000021.1	Protein Homology	CDS	25077	25403	.	+	0	ID=cds-J4731_11995;Parent=gene-J4731_11995;Note=frameshifted;gbkey=CDS;gene=tusC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004718563.1;locus_tag=J4731_11995;product=sulfurtransferase complex subunit TusC;pseudo=true;transl_table=11
JAGETS010000021.1	Genbank	pseudogene	25458	25857	.	+	.	ID=gene-J4731_12000;Name=tusB;gbkey=Gene;gene=tusB;gene_biotype=pseudogene;locus_tag=J4731_12000;pseudo=true
JAGETS010000021.1	Protein Homology	CDS	25458	25857	.	+	0	ID=cds-J4731_12000;Parent=gene-J4731_12000;Note=frameshifted;gbkey=CDS;gene=tusB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008912852.1;locus_tag=J4731_12000;product=sulfurtransferase complex subunit TusB;pseudo=true;transl_table=11
JAGETS010000021.1	Genbank	pseudogene	25877	26230	.	+	.	ID=gene-J4731_12005;Name=rpsL;gbkey=Gene;gene=rpsL;gene_biotype=pseudogene;locus_tag=J4731_12005;pseudo=true
JAGETS010000021.1	Protein Homology	CDS	25877	26230	.	+	0	ID=cds-J4731_12005;Parent=gene-J4731_12005;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;gene=rpsL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005306278.1;locus_tag=J4731_12005;product=30S ribosomal protein S12;pseudo=true;transl_table=11
JAGETS010000021.1	Genbank	pseudogene	26346	26814	.	+	.	ID=gene-J4731_12010;Name=rpsG;gbkey=Gene;gene=rpsG;gene_biotype=pseudogene;locus_tag=J4731_12010;pseudo=true
JAGETS010000021.1	Protein Homology	CDS	26346	26814	.	+	0	ID=cds-J4731_12010;Parent=gene-J4731_12010;Note=frameshifted;gbkey=CDS;gene=rpsG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015873274.1;locus_tag=J4731_12010;product=30S ribosomal protein S7;pseudo=true;transl_table=11
JAGETS010000021.1	Genbank	gene	26895	27173	.	+	.	ID=gene-J4731_12015;Name=J4731_12015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_12015
JAGETS010000021.1	Protein Homology	CDS	26895	27173	.	+	0	ID=cds-MBO1929211.1;Parent=gene-J4731_12015;Dbxref=NCBI_GP:MBO1929211.1;Name=MBO1929211.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012239.1;locus_tag=J4731_12015;product=GTP-binding protein;protein_id=MBO1929211.1;transl_table=11
JAGETS010000021.1	Genbank	pseudogene	27199	29014	.	+	.	ID=gene-J4731_12020;Name=fusA;gbkey=Gene;gene=fusA;gene_biotype=pseudogene;locus_tag=J4731_12020;pseudo=true
JAGETS010000021.1	Protein Homology	CDS	27199	29014	.	+	0	ID=cds-J4731_12020;Parent=gene-J4731_12020;Note=frameshifted;gbkey=CDS;gene=fusA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002409138.1;locus_tag=J4731_12020;product=elongation factor G;pseudo=true;transl_table=11
JAGETS010000021.1	Genbank	pseudogene	29140	30272	.	+	.	ID=gene-J4731_12025;Name=tuf;gbkey=Gene;gene=tuf;gene_biotype=pseudogene;locus_tag=J4731_12025;pseudo=true
JAGETS010000021.1	Protein Homology	CDS	29140	30272	.	+	0	ID=cds-J4731_12025;Parent=gene-J4731_12025;Note=frameshifted;gbkey=CDS;gene=tuf;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012147227.1;locus_tag=J4731_12025;product=elongation factor Tu;pseudo=true;transl_table=11
JAGETS010000021.1	Genbank	pseudogene	30885	31268	.	+	.	ID=gene-J4731_12030;Name=secE;gbkey=Gene;gene=secE;gene_biotype=pseudogene;locus_tag=J4731_12030;pseudo=true
JAGETS010000021.1	Protein Homology	CDS	30885	31268	.	+	0	ID=cds-J4731_12030;Parent=gene-J4731_12030;Note=frameshifted;gbkey=CDS;gene=secE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004924767.1;locus_tag=J4731_12030;product=preprotein translocase subunit SecE;pseudo=true;transl_table=11
JAGETS010000021.1	Genbank	pseudogene	31301	31811	.	+	.	ID=gene-J4731_12035;Name=nusG;gbkey=Gene;gene=nusG;gene_biotype=pseudogene;locus_tag=J4731_12035;pseudo=true
JAGETS010000021.1	Protein Homology	CDS	31301	31811	.	+	0	ID=cds-J4731_12035;Parent=gene-J4731_12035;Note=frameshifted;gbkey=CDS;gene=nusG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005280494.1;locus_tag=J4731_12035;product=transcription termination/antitermination protein NusG;pseudo=true;transl_table=11
JAGETS010000021.1	Genbank	pseudogene	31970	32396	.	+	.	ID=gene-J4731_12040;Name=rplK;gbkey=Gene;gene=rplK;gene_biotype=pseudogene;locus_tag=J4731_12040;pseudo=true
JAGETS010000021.1	Protein Homology	CDS	31970	32396	.	+	0	ID=cds-J4731_12040;Parent=gene-J4731_12040;Note=frameshifted;gbkey=CDS;gene=rplK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006121495.1;locus_tag=J4731_12040;product=50S ribosomal protein L11;pseudo=true;transl_table=11
JAGETS010000021.1	Genbank	gene	32401	33123	.	+	.	ID=gene-J4731_12045;Name=rplA;gbkey=Gene;gene=rplA;gene_biotype=protein_coding;locus_tag=J4731_12045
JAGETS010000021.1	Protein Homology	CDS	32401	33123	.	+	0	ID=cds-MBO1929212.1;Parent=gene-J4731_12045;Dbxref=NCBI_GP:MBO1929212.1;Name=MBO1929212.1;gbkey=CDS;gene=rplA;inference=COORDINATES: protein motif:HMM:NF003845.0;locus_tag=J4731_12045;product=50S ribosomal protein L1;protein_id=MBO1929212.1;transl_table=11
JAGETS010000021.1	Genbank	gene	33528	33902	.	+	.	ID=gene-J4731_12050;Name=J4731_12050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_12050
JAGETS010000021.1	Protein Homology	CDS	33528	33902	.	+	0	ID=cds-MBO1929213.1;Parent=gene-J4731_12050;Dbxref=NCBI_GP:MBO1929213.1;Name=MBO1929213.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012679.1;locus_tag=J4731_12050;product=50S ribosomal protein L10;protein_id=MBO1929213.1;transl_table=11
JAGETS010000021.1	Genbank	pseudogene	33961	34293	.	+	.	ID=gene-J4731_12055;Name=rplL;gbkey=Gene;gene=rplL;gene_biotype=pseudogene;locus_tag=J4731_12055;pseudo=true
JAGETS010000021.1	Protein Homology	CDS	33961	34293	.	+	0	ID=cds-J4731_12055;Parent=gene-J4731_12055;Note=frameshifted;gbkey=CDS;gene=rplL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010375894.1;locus_tag=J4731_12055;product=50S ribosomal protein L7/L12;pseudo=true;transl_table=11
JAGETS010000021.1	Genbank	pseudogene	34668	38657	.	+	.	ID=gene-J4731_12060;Name=rpoB;gbkey=Gene;gene=rpoB;gene_biotype=pseudogene;locus_tag=J4731_12060;pseudo=true
JAGETS010000021.1	Protein Homology	CDS	34668	38657	.	+	0	ID=cds-J4731_12060;Parent=gene-J4731_12060;Note=frameshifted;gbkey=CDS;gene=rpoB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004870488.1;locus_tag=J4731_12060;product=DNA-directed RNA polymerase subunit beta;pseudo=true;transl_table=11
JAGETS010000021.1	Genbank	pseudogene	38764	42951	.	+	.	ID=gene-J4731_12065;Name=rpoC;gbkey=Gene;gene=rpoC;gene_biotype=pseudogene;locus_tag=J4731_12065;pseudo=true
JAGETS010000021.1	Protein Homology	CDS	38764	42951	.	+	0	ID=cds-J4731_12065;Parent=gene-J4731_12065;Note=frameshifted;gbkey=CDS;gene=rpoC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004264390.1;locus_tag=J4731_12065;product=DNA-directed RNA polymerase subunit beta';pseudo=true;transl_table=11
JAGETS010000021.1	Genbank	pseudogene	43185	44099	.	+	.	ID=gene-J4731_12070;Name=J4731_12070;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_12070;pseudo=true
JAGETS010000021.1	Protein Homology	CDS	43185	44099	.	+	0	ID=cds-J4731_12070;Parent=gene-J4731_12070;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006663016.1;locus_tag=J4731_12070;product=VWA domain-containing protein;pseudo=true;transl_table=11
JAGETS010000021.1	Genbank	pseudogene	44141	45535	.	-	.	ID=gene-J4731_12075;Name=dcuC;gbkey=Gene;gene=dcuC;gene_biotype=pseudogene;locus_tag=J4731_12075;pseudo=true
JAGETS010000021.1	Protein Homology	CDS	44141	45535	.	-	0	ID=cds-J4731_12075;Parent=gene-J4731_12075;Note=frameshifted;gbkey=CDS;gene=dcuC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004252539.1;locus_tag=J4731_12075;product=C4-dicarboxylate transporter DcuC;pseudo=true;transl_table=11
JAGETS010000021.1	Genbank	pseudogene	45532	46780	.	-	.	ID=gene-J4731_12080;Name=pepT;gbkey=Gene;gene=pepT;gene_biotype=pseudogene;locus_tag=J4731_12080;pseudo=true
JAGETS010000021.1	Protein Homology	CDS	45532	46780	.	-	0	ID=cds-J4731_12080;Parent=gene-J4731_12080;Note=frameshifted;gbkey=CDS;gene=pepT;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004245053.1;locus_tag=J4731_12080;product=peptidase T;pseudo=true;transl_table=11
JAGETS010000021.1	Genbank	pseudogene	47666	49218	.	+	.	ID=gene-J4731_12085;Name=J4731_12085;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_12085;pseudo=true
JAGETS010000021.1	Protein Homology	CDS	47666	49218	.	+	0	ID=cds-J4731_12085;Parent=gene-J4731_12085;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004264409.1;locus_tag=J4731_12085;product=sulfatase-like hydrolase/transferase;pseudo=true;transl_table=11
JAGETS010000021.1	Genbank	pseudogene	49340	50053	.	+	.	ID=gene-J4731_12090;Name=J4731_12090;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_12090;pseudo=true
JAGETS010000021.1	Protein Homology	CDS	49340	50053	.	+	0	ID=cds-J4731_12090;Parent=gene-J4731_12090;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006815812.1;locus_tag=J4731_12090;product=hypothetical protein;pseudo=true;transl_table=11
JAGETS010000021.1	Genbank	pseudogene	50226	51289	.	-	.	ID=gene-J4731_12095;Name=J4731_12095;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_12095;pseudo=true
JAGETS010000021.1	Protein Homology	CDS	50226	51289	.	-	0	ID=cds-J4731_12095;Parent=gene-J4731_12095;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004264422.1;locus_tag=J4731_12095;product=glycoside hydrolase family 88 protein;pseudo=true;transl_table=11
JAGETS010000021.1	Genbank	pseudogene	51307	52059	.	-	.	ID=gene-J4731_12100;Name=kduD;gbkey=Gene;gene=kduD;gene_biotype=pseudogene;locus_tag=J4731_12100;pseudo=true
JAGETS010000021.1	Protein Homology	CDS	51307	52059	.	-	0	ID=cds-J4731_12100;Parent=gene-J4731_12100;Note=frameshifted;gbkey=CDS;gene=kduD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209883.1;locus_tag=J4731_12100;product=2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase KduD;pseudo=true;transl_table=11
JAGETS010000021.1	Genbank	pseudogene	52126	52951	.	-	.	ID=gene-J4731_12105;Name=kduI;gbkey=Gene;gene=kduI;gene_biotype=pseudogene;locus_tag=J4731_12105;pseudo=true
JAGETS010000021.1	Protein Homology	CDS	52126	52951	.	-	0	ID=cds-J4731_12105;Parent=gene-J4731_12105;Note=frameshifted;gbkey=CDS;gene=kduI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006533834.1;locus_tag=J4731_12105;product=5-dehydro-4-deoxy-D-glucuronate isomerase;pseudo=true;transl_table=11
JAGETS010000021.1	Genbank	pseudogene	52989	54158	.	-	.	ID=gene-J4731_12110;Name=nagA;gbkey=Gene;gene=nagA;gene_biotype=pseudogene;locus_tag=J4731_12110;pseudo=true
JAGETS010000021.1	Protein Homology	CDS	52989	54158	.	-	0	ID=cds-J4731_12110;Parent=gene-J4731_12110;Note=frameshifted;gbkey=CDS;gene=nagA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004264430.1;locus_tag=J4731_12110;product=N-acetylglucosamine-6-phosphate deacetylase;pseudo=true;transl_table=11
JAGETS010000021.1	Genbank	pseudogene	54155	54583	.	-	.	ID=gene-J4731_12115;Name=J4731_12115;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_12115;pseudo=true
JAGETS010000021.1	Protein Homology	CDS	54155	54583	.	-	0	ID=cds-J4731_12115;Parent=gene-J4731_12115;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012104706.1;locus_tag=J4731_12115;product=PTS mannose transporter subunit IIA;pseudo=true;transl_table=11
JAGETS010000021.1	Genbank	pseudogene	54646	55480	.	-	.	ID=gene-J4731_12120;Name=J4731_12120;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_12120;pseudo=true
JAGETS010000021.1	Protein Homology	CDS	54646	55480	.	-	0	ID=cds-J4731_12120;Parent=gene-J4731_12120;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015683875.1;locus_tag=J4731_12120;product=PTS mannose/fructose/sorbose transporter family subunit IID;pseudo=true;transl_table=11
JAGETS010000021.1	Genbank	pseudogene	55514	56275	.	-	.	ID=gene-J4731_12125;Name=J4731_12125;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_12125;pseudo=true
JAGETS010000021.1	Protein Homology	CDS	55514	56275	.	-	0	ID=cds-J4731_12125;Parent=gene-J4731_12125;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209879.1;locus_tag=J4731_12125;product=PTS mannose/fructose/sorbose/N-acetylgalactosamine transporter subunit IIC;pseudo=true;transl_table=11
JAGETS010000021.1	Genbank	pseudogene	56324	56817	.	-	.	ID=gene-J4731_12130;Name=J4731_12130;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_12130;pseudo=true
JAGETS010000021.1	Protein Homology	CDS	56324	56817	.	-	0	ID=cds-J4731_12130;Parent=gene-J4731_12130;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004244211.1;locus_tag=J4731_12130;product=PTS system mannose/fructose/N-acetylgalactosamine-transporter subunit IIB;pseudo=true;transl_table=11
JAGETS010000021.1	Genbank	pseudogene	56852	58032	.	-	.	ID=gene-J4731_12135;Name=J4731_12135;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_12135;pseudo=true
JAGETS010000021.1	Protein Homology	CDS	56852	58032	.	-	0	ID=cds-J4731_12135;Parent=gene-J4731_12135;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004244212.1;locus_tag=J4731_12135;product=SIS domain-containing protein;pseudo=true;transl_table=11
JAGETS010000021.1	Genbank	pseudogene	58034	59311	.	-	.	ID=gene-J4731_12140;Name=kbaZ;gbkey=Gene;gene=kbaZ;gene_biotype=pseudogene;locus_tag=J4731_12140;pseudo=true
JAGETS010000021.1	Protein Homology	CDS	58034	59311	.	-	0	ID=cds-J4731_12140;Parent=gene-J4731_12140;Note=frameshifted%3B internal stop;gbkey=CDS;gene=kbaZ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015960556.1;locus_tag=J4731_12140;product=tagatose-bisphosphate aldolase subunit KbaZ;pseudo=true;transl_table=11
JAGETS010000021.1	Genbank	pseudogene	59363	60136	.	-	.	ID=gene-J4731_12145;Name=J4731_12145;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_12145;pseudo=true
JAGETS010000021.1	Protein Homology	CDS	59363	60136	.	-	0	ID=cds-J4731_12145;Parent=gene-J4731_12145;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000642265.1;locus_tag=J4731_12145;product=DeoR/GlpR transcriptional regulator;pseudo=true;transl_table=11
JAGETS010000021.1	Genbank	pseudogene	60659	61886	.	+	.	ID=gene-J4731_12150;Name=J4731_12150;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_12150;pseudo=true
JAGETS010000021.1	Protein Homology	CDS	60659	61886	.	+	0	ID=cds-J4731_12150;Parent=gene-J4731_12150;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017627906.1;locus_tag=J4731_12150;product=anaerobic sulfatase maturase;pseudo=true;transl_table=11
JAGETS010000021.1	Genbank	pseudogene	61910	63484	.	+	.	ID=gene-J4731_12155;Name=J4731_12155;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_12155;pseudo=true
JAGETS010000021.1	Protein Homology	CDS	61910	63484	.	+	0	ID=cds-J4731_12155;Parent=gene-J4731_12155;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192900.1;locus_tag=J4731_12155;product=sulfatase-like hydrolase/transferase;pseudo=true;transl_table=11
JAGETS010000021.1	Genbank	pseudogene	63564	65016	.	+	.	ID=gene-J4731_12160;Name=J4731_12160;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_12160;pseudo=true
JAGETS010000021.1	Protein Homology	CDS	63564	65016	.	+	0	ID=cds-J4731_12160;Parent=gene-J4731_12160;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012303733.1;locus_tag=J4731_12160;product=DUF2264 domain-containing protein;pseudo=true;transl_table=11
JAGETS010000021.1	Genbank	pseudogene	65132	65983	.	+	.	ID=gene-J4731_12165;Name=J4731_12165;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_12165;pseudo=true
JAGETS010000021.1	Protein Homology	CDS	65132	65983	.	+	0	ID=cds-J4731_12165;Parent=gene-J4731_12165;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004248618.1;locus_tag=J4731_12165;product=tagatose bisphosphate family class II aldolase;pseudo=true;transl_table=11
JAGETS010000021.1	Genbank	pseudogene	66091	66663	.	+	.	ID=gene-J4731_12170;Name=J4731_12170;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_12170;pseudo=true
JAGETS010000021.1	Protein Homology	CDS	66091	66663	.	+	0	ID=cds-J4731_12170;Parent=gene-J4731_12170;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004244223.1;locus_tag=J4731_12170;product=DJ-1/PfpI family protein;pseudo=true;transl_table=11
JAGETS010000021.1	Genbank	pseudogene	66933	68193	.	+	.	ID=gene-J4731_12175;Name=J4731_12175;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_12175;pseudo=true
JAGETS010000021.1	Protein Homology	CDS	66933	68193	.	+	0	ID=cds-J4731_12175;Parent=gene-J4731_12175;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008912841.1;locus_tag=J4731_12175;product=uracil/xanthine transporter;pseudo=true;transl_table=11
JAGETS010000021.1	Genbank	gene	68425	68808	.	-	.	ID=gene-J4731_12180;Name=J4731_12180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_12180
JAGETS010000021.1	Protein Homology	CDS	68425	68808	.	-	0	ID=cds-MBO1929214.1;Parent=gene-J4731_12180;Dbxref=NCBI_GP:MBO1929214.1;Name=MBO1929214.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020650.1;locus_tag=J4731_12180;product=ABC transporter substrate-binding protein;protein_id=MBO1929214.1;transl_table=11
JAGETS010000021.1	Genbank	gene	68783	68917	.	-	.	ID=gene-J4731_12185;Name=J4731_12185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_12185
JAGETS010000021.1	Protein Homology	CDS	68783	68917	.	-	0	ID=cds-MBO1929215.1;Parent=gene-J4731_12185;Dbxref=NCBI_GP:MBO1929215.1;Name=MBO1929215.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020650.1;locus_tag=J4731_12185;product=ABC transporter substrate-binding protein;protein_id=MBO1929215.1;transl_table=11
JAGETS010000021.1	Genbank	gene	68950	69111	.	-	.	ID=gene-J4731_12190;Name=J4731_12190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_12190
JAGETS010000021.1	GeneMarkS-2+	CDS	68950	69111	.	-	0	ID=cds-MBO1929216.1;Parent=gene-J4731_12190;Dbxref=NCBI_GP:MBO1929216.1;Name=MBO1929216.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_12190;product=hypothetical protein;protein_id=MBO1929216.1;transl_table=11
JAGETS010000021.1	Genbank	gene	69770	69994	.	-	.	ID=gene-J4731_12195;Name=J4731_12195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_12195
JAGETS010000021.1	Protein Homology	CDS	69770	69994	.	-	0	ID=cds-MBO1929217.1;Parent=gene-J4731_12195;Dbxref=NCBI_GP:MBO1929217.1;Name=MBO1929217.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003131508.1;locus_tag=J4731_12195;product=ATP-binding cassette domain-containing protein;protein_id=MBO1929217.1;transl_table=11
JAGETS010000021.1	Genbank	gene	70231	70527	.	-	.	ID=gene-J4731_12200;Name=J4731_12200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_12200
JAGETS010000021.1	Protein Homology	CDS	70231	70527	.	-	0	ID=cds-MBO1929218.1;Parent=gene-J4731_12200;Dbxref=NCBI_GP:MBO1929218.1;Name=MBO1929218.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012738.1;locus_tag=J4731_12200;product=hypothetical protein;protein_id=MBO1929218.1;transl_table=11
JAGETS010000021.1	Genbank	gene	70777	70995	.	-	.	ID=gene-J4731_12205;Name=J4731_12205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_12205
JAGETS010000021.1	GeneMarkS-2+	CDS	70777	70995	.	-	0	ID=cds-MBO1929219.1;Parent=gene-J4731_12205;Dbxref=NCBI_GP:MBO1929219.1;Name=MBO1929219.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_12205;product=hypothetical protein;protein_id=MBO1929219.1;transl_table=11
JAGETS010000021.1	Genbank	gene	70988	71206	.	-	.	ID=gene-J4731_12210;Name=J4731_12210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_12210
JAGETS010000021.1	GeneMarkS-2+	CDS	70988	71206	.	-	0	ID=cds-MBO1929220.1;Parent=gene-J4731_12210;Dbxref=NCBI_GP:MBO1929220.1;Name=MBO1929220.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_12210;product=hypothetical protein;protein_id=MBO1929220.1;transl_table=11
JAGETS010000021.1	Genbank	pseudogene	71188	72562	.	-	.	ID=gene-J4731_12215;Name=J4731_12215;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_12215;pseudo=true
JAGETS010000021.1	Protein Homology	CDS	71188	72562	.	-	0	ID=cds-J4731_12215;Parent=gene-J4731_12215;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015839702.1;locus_tag=J4731_12215;product=aryl-sulfate sulfotransferase;pseudo=true;transl_table=11
JAGETS010000021.1	Genbank	pseudogene	72892	74010	.	-	.	ID=gene-J4731_12220;Name=thiH;gbkey=Gene;gene=thiH;gene_biotype=pseudogene;locus_tag=J4731_12220;pseudo=true
JAGETS010000021.1	Protein Homology	CDS	72892	74010	.	-	0	ID=cds-J4731_12220;Parent=gene-J4731_12220;Note=frameshifted;gbkey=CDS;gene=thiH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006663014.1;locus_tag=J4731_12220;product=2-iminoacetate synthase ThiH;pseudo=true;transl_table=11
JAGETS010000021.1	Genbank	pseudogene	74021	74773	.	-	.	ID=gene-J4731_12225;Name=J4731_12225;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_12225;pseudo=true
JAGETS010000021.1	Protein Homology	CDS	74021	74773	.	-	0	ID=cds-J4731_12225;Parent=gene-J4731_12225;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246911.1;locus_tag=J4731_12225;product=thiazole synthase;pseudo=true;transl_table=11
JAGETS010000021.1	Genbank	pseudogene	74781	74975	.	-	.	ID=gene-J4731_12230;Name=thiS;gbkey=Gene;gene=thiS;gene_biotype=pseudogene;locus_tag=J4731_12230;pseudo=true
JAGETS010000021.1	Protein Homology	CDS	74781	74975	.	-	0	ID=cds-J4731_12230;Parent=gene-J4731_12230;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;gene=thiS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004924788.1;locus_tag=J4731_12230;product=sulfur carrier protein ThiS;pseudo=true;transl_table=11
JAGETS010000021.1	Genbank	pseudogene	74963	75713	.	-	.	ID=gene-J4731_12235;Name=J4731_12235;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_12235;pseudo=true
JAGETS010000021.1	Protein Homology	CDS	74963	75713	.	-	0	ID=cds-J4731_12235;Parent=gene-J4731_12235;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006657058.1;locus_tag=J4731_12235;product=HesA/MoeB/ThiF family protein;pseudo=true;transl_table=11
JAGETS010000021.1	Genbank	pseudogene	75808	76427	.	-	.	ID=gene-J4731_12240;Name=thiE;gbkey=Gene;gene=thiE;gene_biotype=pseudogene;locus_tag=J4731_12240;pseudo=true
JAGETS010000021.1	Protein Homology	CDS	75808	76427	.	-	0	ID=cds-J4731_12240;Parent=gene-J4731_12240;Note=frameshifted;gbkey=CDS;gene=thiE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017375522.1;locus_tag=J4731_12240;product=thiamine phosphate synthase;pseudo=true;transl_table=11
JAGETS010000021.1	Genbank	pseudogene	76468	78370	.	-	.	ID=gene-J4731_12245;Name=thiC;gbkey=Gene;gene=thiC;gene_biotype=pseudogene;locus_tag=J4731_12245;pseudo=true
JAGETS010000021.1	Protein Homology	CDS	76468	78370	.	-	0	ID=cds-J4731_12245;Parent=gene-J4731_12245;Note=frameshifted%3B internal stop;gbkey=CDS;gene=thiC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011915471.1;locus_tag=J4731_12245;product=phosphomethylpyrimidine synthase ThiC;pseudo=true;transl_table=11
JAGETS010000021.1	cmsearch	riboswitch	78540	78651	.	-	.	ID=id-JAGETS010000021.1:78540..78651;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch
JAGETS010000021.1	Genbank	pseudogene	79004	79662	.	-	.	ID=gene-J4731_12250;Name=J4731_12250;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_12250;pseudo=true
JAGETS010000021.1	Protein Homology	CDS	79004	79662	.	-	0	ID=cds-J4731_12250;Parent=gene-J4731_12250;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014656951.1;locus_tag=J4731_12250;product=HAD family hydrolase;pseudo=true;transl_table=11
JAGETS010000021.1	Genbank	pseudogene	79674	80686	.	-	.	ID=gene-J4731_12255;Name=J4731_12255;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_12255;pseudo=true
JAGETS010000021.1	Protein Homology	CDS	79674	80686	.	-	0	ID=cds-J4731_12255;Parent=gene-J4731_12255;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014656950.1;locus_tag=J4731_12255;product=ABC transporter ATP-binding protein;pseudo=true;transl_table=11
JAGETS010000021.1	Genbank	pseudogene	80686	81511	.	-	.	ID=gene-J4731_12260;Name=J4731_12260;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_12260;pseudo=true
JAGETS010000021.1	Protein Homology	CDS	80686	81511	.	-	0	ID=cds-J4731_12260;Parent=gene-J4731_12260;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004264512.1;locus_tag=J4731_12260;product=ABC transporter permease;pseudo=true;transl_table=11
JAGETS010000021.1	Genbank	pseudogene	81501	82296	.	-	.	ID=gene-J4731_12265;Name=J4731_12265;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_12265;pseudo=true
JAGETS010000021.1	Protein Homology	CDS	81501	82296	.	-	0	ID=cds-J4731_12265;Parent=gene-J4731_12265;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013200330.1;locus_tag=J4731_12265;product=ABC transporter permease subunit;pseudo=true;transl_table=11
JAGETS010000021.1	Genbank	pseudogene	82409	83204	.	-	.	ID=gene-J4731_12270;Name=J4731_12270;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_12270;pseudo=true
JAGETS010000021.1	Protein Homology	CDS	82409	83204	.	-	0	ID=cds-J4731_12270;Parent=gene-J4731_12270;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006813659.1;locus_tag=J4731_12270;product=alkaline phosphatase family protein;pseudo=true;transl_table=11
JAGETS010000021.1	Genbank	pseudogene	83233	84280	.	-	.	ID=gene-J4731_12275;Name=J4731_12275;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_12275;pseudo=true
JAGETS010000021.1	Protein Homology	CDS	83233	84280	.	-	0	ID=cds-J4731_12275;Parent=gene-J4731_12275;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006813658.1;locus_tag=J4731_12275;product=ABC transporter substrate-binding protein;pseudo=true;transl_table=11
JAGETS010000021.1	Genbank	pseudogene	84527	85316	.	+	.	ID=gene-J4731_12280;Name=nudC;gbkey=Gene;gene=nudC;gene_biotype=pseudogene;locus_tag=J4731_12280;pseudo=true
JAGETS010000021.1	Protein Homology	CDS	84527	85316	.	+	0	ID=cds-J4731_12280;Parent=gene-J4731_12280;Note=frameshifted;gbkey=CDS;gene=nudC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004264517.1;locus_tag=J4731_12280;product=NAD(+) diphosphatase;pseudo=true;transl_table=11
JAGETS010000021.1	Genbank	pseudogene	85444	86469	.	+	.	ID=gene-J4731_12285;Name=hemE;gbkey=Gene;gene=hemE;gene_biotype=pseudogene;locus_tag=J4731_12285;pseudo=true
JAGETS010000021.1	Protein Homology	CDS	85444	86469	.	+	0	ID=cds-J4731_12285;Parent=gene-J4731_12285;Note=frameshifted;gbkey=CDS;gene=hemE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012004754.1;locus_tag=J4731_12285;product=uroporphyrinogen decarboxylase;pseudo=true;transl_table=11
JAGETS010000021.1	Genbank	pseudogene	86579	87228	.	+	.	ID=gene-J4731_12290;Name=nfi;gbkey=Gene;gene=nfi;gene_biotype=pseudogene;locus_tag=J4731_12290;pseudo=true
JAGETS010000021.1	Protein Homology	CDS	86579	87228	.	+	0	ID=cds-J4731_12290;Parent=gene-J4731_12290;Note=cleaves DNA at apurinic or apyrimidinic sites%3B frameshifted;gbkey=CDS;gene=nfi;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008912825.1;locus_tag=J4731_12290;product=deoxyribonuclease V;pseudo=true;transl_table=11
JAGETS010000021.1	Genbank	pseudogene	87320	87897	.	+	.	ID=gene-J4731_12295;Name=J4731_12295;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_12295;pseudo=true
JAGETS010000021.1	Protein Homology	CDS	87320	87897	.	+	0	ID=cds-J4731_12295;Parent=gene-J4731_12295;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006657070.1;locus_tag=J4731_12295;product=YjaG family protein;pseudo=true;transl_table=11
JAGETS010000021.1	Genbank	pseudogene	88101	88371	.	+	.	ID=gene-J4731_12300;Name=J4731_12300;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_12300;pseudo=true
JAGETS010000021.1	Protein Homology	CDS	88101	88371	.	+	0	ID=cds-J4731_12300;Parent=gene-J4731_12300;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004399274.1;locus_tag=J4731_12300;product=HU family DNA-binding protein;pseudo=true;transl_table=11
JAGETS010000021.1	Genbank	gene	88442	88693	.	+	.	ID=gene-J4731_12305;Name=J4731_12305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_12305
JAGETS010000021.1	Protein Homology	CDS	88442	88693	.	+	0	ID=cds-MBO1929221.1;Parent=gene-J4731_12305;Dbxref=NCBI_GP:MBO1929221.1;Name=MBO1929221.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019004.1;locus_tag=J4731_12305;product=DUF1481 domain-containing protein;protein_id=MBO1929221.1;transl_table=11
JAGETS010000021.1	Genbank	gene	88740	89003	.	+	.	ID=gene-J4731_12310;Name=J4731_12310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_12310
JAGETS010000021.1	Protein Homology	CDS	88740	89003	.	+	0	ID=cds-MBO1929222.1;Parent=gene-J4731_12310;Dbxref=NCBI_GP:MBO1929222.1;Name=MBO1929222.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019004.1;locus_tag=J4731_12310;product=DUF1481 domain-containing protein;protein_id=MBO1929222.1;transl_table=11
JAGETS010000021.1	Genbank	pseudogene	89414	90688	.	-	.	ID=gene-J4731_12315;Name=purD;gbkey=Gene;gene=purD;gene_biotype=pseudogene;locus_tag=J4731_12315;pseudo=true
JAGETS010000021.1	Protein Homology	CDS	89414	90688	.	-	0	ID=cds-J4731_12315;Parent=gene-J4731_12315;Note=frameshifted%3B internal stop;gbkey=CDS;gene=purD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012368502.1;locus_tag=J4731_12315;product=phosphoribosylamine--glycine ligase;pseudo=true;transl_table=11
JAGETS010000021.1	Genbank	pseudogene	90706	92276	.	-	.	ID=gene-J4731_12320;Name=purH;gbkey=Gene;gene=purH;gene_biotype=pseudogene;locus_tag=J4731_12320;pseudo=true
JAGETS010000021.1	Protein Homology	CDS	90706	92276	.	-	0	ID=cds-J4731_12320;Parent=gene-J4731_12320;Note=frameshifted;gbkey=CDS;gene=purH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132841.1;locus_tag=J4731_12320;product=bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase;pseudo=true;transl_table=11
JAGETS010000021.1	Genbank	gene	93080	93948	.	+	.	ID=gene-J4731_12325;Name=J4731_12325;end_range=93948,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=J4731_12325;partial=true
JAGETS010000021.1	cmsearch	rRNA	93080	93948	.	+	.	ID=rna-J4731_12325;Parent=gene-J4731_12325;Dbxref=RFAM:RF00177;end_range=93948,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=J4731_12325;partial=true;product=16S ribosomal RNA
JAGETS010000021.1	cmsearch	exon	93080	93948	.	+	.	ID=exon-J4731_12325-1;Parent=rna-J4731_12325;Dbxref=RFAM:RF00177;end_range=93948,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=J4731_12325;partial=true;product=16S ribosomal RNA
##sequence-region JAGETS010000022.1 1 46318
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=587
JAGETS010000022.1	Genbank	region	1	46318	.	+	.	ID=JAGETS010000022.1:1..46318;Dbxref=taxon:587;collected-by=NHLS;collection-date=2018;country=South Africa: Pretoria;gbkey=Src;isolation-source=stool;lat-lon=25.7479 S 28.2293 E;mol_type=genomic DNA;nat-host=porcine;strain=SG003
JAGETS010000022.1	Genbank	pseudogene	594	1856	.	-	.	ID=gene-J4731_12330;Name=purD;gbkey=Gene;gene=purD;gene_biotype=pseudogene;locus_tag=J4731_12330;pseudo=true
JAGETS010000022.1	Protein Homology	CDS	594	1856	.	-	0	ID=cds-J4731_12330;Parent=gene-J4731_12330;Note=frameshifted;gbkey=CDS;gene=purD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224525.1;locus_tag=J4731_12330;product=phosphoribosylamine--glycine ligase;pseudo=true;transl_table=11
JAGETS010000022.1	Genbank	pseudogene	1871	3443	.	-	.	ID=gene-J4731_12335;Name=purH;gbkey=Gene;gene=purH;gene_biotype=pseudogene;locus_tag=J4731_12335;pseudo=true
JAGETS010000022.1	Protein Homology	CDS	1871	3443	.	-	0	ID=cds-J4731_12335;Parent=gene-J4731_12335;Note=frameshifted;gbkey=CDS;gene=purH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132841.1;locus_tag=J4731_12335;product=bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase;pseudo=true;transl_table=11
JAGETS010000022.1	Genbank	gene	3744	3983	.	+	.	ID=gene-J4731_12340;Name=J4731_12340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_12340
JAGETS010000022.1	GeneMarkS-2+	CDS	3744	3983	.	+	0	ID=cds-MBO1929223.1;Parent=gene-J4731_12340;Dbxref=NCBI_GP:MBO1929223.1;Name=MBO1929223.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_12340;product=hypothetical protein;protein_id=MBO1929223.1;transl_table=11
JAGETS010000022.1	Genbank	gene	4240	5760	.	+	.	ID=gene-J4731_12345;Name=J4731_12345;gbkey=Gene;gene_biotype=rRNA;locus_tag=J4731_12345
JAGETS010000022.1	cmsearch	rRNA	4240	5760	.	+	.	ID=rna-J4731_12345;Parent=gene-J4731_12345;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=J4731_12345;product=16S ribosomal RNA
JAGETS010000022.1	cmsearch	exon	4240	5760	.	+	.	ID=exon-J4731_12345-1;Parent=rna-J4731_12345;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=J4731_12345;product=16S ribosomal RNA
JAGETS010000022.1	Genbank	gene	5896	5971	.	+	.	ID=gene-J4731_12350;Name=J4731_12350;gbkey=Gene;gene_biotype=tRNA;locus_tag=J4731_12350
JAGETS010000022.1	tRNAscan-SE	tRNA	5896	5971	.	+	.	ID=rna-J4731_12350;Parent=gene-J4731_12350;anticodon=(pos:5930..5932);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=J4731_12350;product=tRNA-Glu
JAGETS010000022.1	tRNAscan-SE	exon	5896	5971	.	+	.	ID=exon-J4731_12350-1;Parent=rna-J4731_12350;anticodon=(pos:5930..5932);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=J4731_12350;product=tRNA-Glu
JAGETS010000022.1	Genbank	gene	6317	9374	.	+	.	ID=gene-J4731_12355;Name=J4731_12355;gbkey=Gene;gene_biotype=rRNA;locus_tag=J4731_12355
JAGETS010000022.1	cmsearch	rRNA	6317	9374	.	+	.	ID=rna-J4731_12355;Parent=gene-J4731_12355;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=J4731_12355;product=23S ribosomal RNA
JAGETS010000022.1	cmsearch	exon	6317	9374	.	+	.	ID=exon-J4731_12355-1;Parent=rna-J4731_12355;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=J4731_12355;product=23S ribosomal RNA
JAGETS010000022.1	Genbank	gene	9511	9626	.	+	.	ID=gene-J4731_12360;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=J4731_12360
JAGETS010000022.1	cmsearch	rRNA	9511	9626	.	+	.	ID=rna-J4731_12360;Parent=gene-J4731_12360;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=J4731_12360;product=5S ribosomal RNA
JAGETS010000022.1	cmsearch	exon	9511	9626	.	+	.	ID=exon-J4731_12360-1;Parent=rna-J4731_12360;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=J4731_12360;product=5S ribosomal RNA
JAGETS010000022.1	Genbank	pseudogene	10593	11516	.	+	.	ID=gene-J4731_12365;Name=metA;gbkey=Gene;gene=metA;gene_biotype=pseudogene;locus_tag=J4731_12365;pseudo=true
JAGETS010000022.1	Protein Homology	CDS	10593	11516	.	+	0	ID=cds-J4731_12365;Parent=gene-J4731_12365;Note=frameshifted;gbkey=CDS;gene=metA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418437.1;locus_tag=J4731_12365;product=homoserine O-succinyltransferase;pseudo=true;transl_table=11
JAGETS010000022.1	Genbank	pseudogene	11874	13465	.	+	.	ID=gene-J4731_12370;Name=aceB;gbkey=Gene;gene=aceB;gene_biotype=pseudogene;locus_tag=J4731_12370;pseudo=true
JAGETS010000022.1	Protein Homology	CDS	11874	13465	.	+	0	ID=cds-J4731_12370;Parent=gene-J4731_12370;Note=frameshifted;gbkey=CDS;gene=aceB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019843259.1;locus_tag=J4731_12370;product=malate synthase A;pseudo=true;transl_table=11
JAGETS010000022.1	Genbank	pseudogene	13562	14797	.	+	.	ID=gene-J4731_12375;Name=aceA;gbkey=Gene;gene=aceA;gene_biotype=pseudogene;locus_tag=J4731_12375;pseudo=true
JAGETS010000022.1	Protein Homology	CDS	13562	14797	.	+	0	ID=cds-J4731_12375;Parent=gene-J4731_12375;Note=frameshifted;gbkey=CDS;gene=aceA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312960.1;locus_tag=J4731_12375;product=isocitrate lyase;pseudo=true;transl_table=11
JAGETS010000022.1	Genbank	pseudogene	14914	16672	.	+	.	ID=gene-J4731_12380;Name=aceK;gbkey=Gene;gene=aceK;gene_biotype=pseudogene;locus_tag=J4731_12380;pseudo=true
JAGETS010000022.1	Protein Homology	CDS	14914	16672	.	+	0	ID=cds-J4731_12380;Parent=gene-J4731_12380;Note=frameshifted;gbkey=CDS;gene=aceK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212079.1;locus_tag=J4731_12380;product=bifunctional isocitrate dehydrogenase kinase/phosphatase;pseudo=true;transl_table=11
JAGETS010000022.1	Genbank	pseudogene	16692	17364	.	-	.	ID=gene-J4731_12385;Name=J4731_12385;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_12385;pseudo=true
JAGETS010000022.1	Protein Homology	CDS	16692	17364	.	-	0	ID=cds-J4731_12385;Parent=gene-J4731_12385;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004245923.1;locus_tag=J4731_12385;product=bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase;pseudo=true;transl_table=11
JAGETS010000022.1	Genbank	pseudogene	17392	19232	.	-	.	ID=gene-J4731_12390;Name=J4731_12390;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_12390;pseudo=true
JAGETS010000022.1	Protein Homology	CDS	17392	19232	.	-	0	ID=cds-J4731_12390;Parent=gene-J4731_12390;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006658593.1;locus_tag=J4731_12390;product=phosphogluconate dehydratase;pseudo=true;transl_table=11
JAGETS010000022.1	Genbank	pseudogene	19545	20329	.	+	.	ID=gene-J4731_12395;Name=J4731_12395;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_12395;pseudo=true
JAGETS010000022.1	Protein Homology	CDS	19545	20329	.	+	0	ID=cds-J4731_12395;Parent=gene-J4731_12395;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004261336.1;locus_tag=J4731_12395;product=DUF1460 domain-containing protein;pseudo=true;transl_table=11
JAGETS010000022.1	Genbank	pseudogene	20783	21014	.	+	.	ID=gene-J4731_12400;Name=J4731_12400;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_12400;pseudo=true
JAGETS010000022.1	Protein Homology	CDS	20783	21014	.	+	0	ID=cds-J4731_12400;Parent=gene-J4731_12400;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014656938.1;locus_tag=J4731_12400;product=helix-turn-helix transcriptional regulator;pseudo=true;transl_table=11
JAGETS010000022.1	Genbank	pseudogene	21520	22421	.	+	.	ID=gene-J4731_12405;Name=J4731_12405;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_12405;pseudo=true
JAGETS010000022.1	Protein Homology	CDS	21520	22421	.	+	0	ID=cds-J4731_12405;Parent=gene-J4731_12405;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006816085.1;locus_tag=J4731_12405;product=N-acetylmuramoyl-L-alanine amidase;pseudo=true;transl_table=11
JAGETS010000022.1	Genbank	pseudogene	22488	23308	.	-	.	ID=gene-J4731_12410;Name=iclR;gbkey=Gene;gene=iclR;gene_biotype=pseudogene;locus_tag=J4731_12410;pseudo=true
JAGETS010000022.1	Protein Homology	CDS	22488	23308	.	-	0	ID=cds-J4731_12410;Parent=gene-J4731_12410;Note=frameshifted;gbkey=CDS;gene=iclR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006816074.1;locus_tag=J4731_12410;product=glyoxylate bypass operon transcriptional repressor IclR;pseudo=true;transl_table=11
JAGETS010000022.1	Genbank	pseudogene	23554	27157	.	+	.	ID=gene-J4731_12415;Name=metH;gbkey=Gene;gene=metH;gene_biotype=pseudogene;locus_tag=J4731_12415;pseudo=true
JAGETS010000022.1	Protein Homology	CDS	23554	27157	.	+	0	ID=cds-J4731_12415;Parent=gene-J4731_12415;Note=frameshifted;gbkey=CDS;gene=metH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004238282.1;locus_tag=J4731_12415;product=methionine synthase;pseudo=true;transl_table=11
JAGETS010000022.1	Genbank	pseudogene	27226	27811	.	+	.	ID=gene-J4731_12420;Name=J4731_12420;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_12420;pseudo=true
JAGETS010000022.1	Protein Homology	CDS	27226	27811	.	+	0	ID=cds-J4731_12420;Parent=gene-J4731_12420;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006816072.1;locus_tag=J4731_12420;product=hypothetical protein;pseudo=true;transl_table=11
JAGETS010000022.1	Genbank	pseudogene	27973	29429	.	+	.	ID=gene-J4731_12425;Name=J4731_12425;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_12425;pseudo=true
JAGETS010000022.1	Protein Homology	CDS	27973	29429	.	+	0	ID=cds-J4731_12425;Parent=gene-J4731_12425;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004925902.1;locus_tag=J4731_12425;product=sel1 repeat family protein;pseudo=true;transl_table=11
JAGETS010000022.1	Genbank	pseudogene	29491	30854	.	-	.	ID=gene-J4731_12430;Name=lysC;gbkey=Gene;gene=lysC;gene_biotype=pseudogene;locus_tag=J4731_12430;pseudo=true
JAGETS010000022.1	Protein Homology	CDS	29491	30854	.	-	0	ID=cds-J4731_12430;Parent=gene-J4731_12430;Note=frameshifted%3B internal stop;gbkey=CDS;gene=lysC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008913734.1;locus_tag=J4731_12430;product=lysine-sensitive aspartokinase 3;pseudo=true;transl_table=11
JAGETS010000022.1	Genbank	pseudogene	31350	32965	.	+	.	ID=gene-J4731_12435;Name=pgi;gbkey=Gene;gene=pgi;gene_biotype=pseudogene;locus_tag=J4731_12435;pseudo=true
JAGETS010000022.1	Protein Homology	CDS	31350	32965	.	+	0	ID=cds-J4731_12435;Parent=gene-J4731_12435;Note=frameshifted;gbkey=CDS;gene=pgi;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224547.1;locus_tag=J4731_12435;product=glucose-6-phosphate isomerase;pseudo=true;transl_table=11
JAGETS010000022.1	Genbank	pseudogene	33250	33756	.	+	.	ID=gene-J4731_12440;Name=ubiC;gbkey=Gene;gene=ubiC;gene_biotype=pseudogene;locus_tag=J4731_12440;pseudo=true
JAGETS010000022.1	Protein Homology	CDS	33250	33756	.	+	0	ID=cds-J4731_12440;Parent=gene-J4731_12440;Note=frameshifted%3B internal stop;gbkey=CDS;gene=ubiC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004925912.1;locus_tag=J4731_12440;product=chorismate lyase;pseudo=true;transl_table=11
JAGETS010000022.1	Genbank	pseudogene	33908	34756	.	+	.	ID=gene-J4731_12445;Name=ubiA;gbkey=Gene;gene=ubiA;gene_biotype=pseudogene;locus_tag=J4731_12445;pseudo=true
JAGETS010000022.1	Protein Homology	CDS	33908	34756	.	+	0	ID=cds-J4731_12445;Parent=gene-J4731_12445;Note=frameshifted;gbkey=CDS;gene=ubiA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004250107.1;locus_tag=J4731_12445;product=4-hydroxybenzoate octaprenyltransferase;pseudo=true;transl_table=11
JAGETS010000022.1	Genbank	pseudogene	34785	37295	.	-	.	ID=gene-J4731_12450;Name=plsB;gbkey=Gene;gene=plsB;gene_biotype=pseudogene;locus_tag=J4731_12450;pseudo=true
JAGETS010000022.1	Protein Homology	CDS	34785	37295	.	-	0	ID=cds-J4731_12450;Parent=gene-J4731_12450;Note=frameshifted;gbkey=CDS;gene=plsB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010308202.1;locus_tag=J4731_12450;product=glycerol-3-phosphate 1-O-acyltransferase PlsB;pseudo=true;transl_table=11
JAGETS010000022.1	Genbank	gene	37420	37827	.	+	.	ID=gene-J4731_12455;Name=J4731_12455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_12455
JAGETS010000022.1	Protein Homology	CDS	37420	37827	.	+	0	ID=cds-MBO1929224.1;Parent=gene-J4731_12455;Dbxref=NCBI_GP:MBO1929224.1;Name=MBO1929224.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004719419.1;locus_tag=J4731_12455;product=diacylglycerol kinase;protein_id=MBO1929224.1;transl_table=11
JAGETS010000022.1	Genbank	pseudogene	37923	38530	.	+	.	ID=gene-J4731_12460;Name=lexA;gbkey=Gene;gene=lexA;gene_biotype=pseudogene;locus_tag=J4731_12460;pseudo=true
JAGETS010000022.1	Protein Homology	CDS	37923	38530	.	+	0	ID=cds-J4731_12460;Parent=gene-J4731_12460;Note=frameshifted;gbkey=CDS;gene=lexA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004261314.1;locus_tag=J4731_12460;product=repressor LexA;pseudo=true;transl_table=11
JAGETS010000022.1	Genbank	pseudogene	38686	39193	.	-	.	ID=gene-J4731_12465;Name=zur;gbkey=Gene;gene=zur;gene_biotype=pseudogene;locus_tag=J4731_12465;pseudo=true
JAGETS010000022.1	Protein Homology	CDS	38686	39193	.	-	0	ID=cds-J4731_12465;Parent=gene-J4731_12465;Note=frameshifted;gbkey=CDS;gene=zur;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004925923.1;locus_tag=J4731_12465;product=zinc uptake transcriptional repressor Zur;pseudo=true;transl_table=11
JAGETS010000022.1	Genbank	pseudogene	40309	40799	.	+	.	ID=gene-J4731_12470;Name=J4731_12470;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_12470;pseudo=true
JAGETS010000022.1	Protein Homology	CDS	40309	40799	.	+	0	ID=cds-J4731_12470;Parent=gene-J4731_12470;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004261308.1;locus_tag=J4731_12470;product=type 1 fimbrial protein;pseudo=true;transl_table=11
JAGETS010000022.1	Genbank	pseudogene	40935	41692	.	+	.	ID=gene-J4731_12475;Name=J4731_12475;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_12475;pseudo=true
JAGETS010000022.1	Protein Homology	CDS	40935	41692	.	+	0	ID=cds-J4731_12475;Parent=gene-J4731_12475;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004925930.1;locus_tag=J4731_12475;product=molecular chaperone;pseudo=true;transl_table=11
JAGETS010000022.1	Genbank	gene	42291	42629	.	+	.	ID=gene-J4731_12480;Name=J4731_12480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_12480
JAGETS010000022.1	GeneMarkS-2+	CDS	42291	42629	.	+	0	ID=cds-MBO1929225.1;Parent=gene-J4731_12480;Dbxref=NCBI_GP:MBO1929225.1;Name=MBO1929225.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_12480;product=hypothetical protein;protein_id=MBO1929225.1;transl_table=11
JAGETS010000022.1	Genbank	gene	42833	42952	.	+	.	ID=gene-J4731_12485;Name=J4731_12485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_12485
JAGETS010000022.1	Protein Homology	CDS	42833	42952	.	+	0	ID=cds-MBO1929226.1;Parent=gene-J4731_12485;Dbxref=NCBI_GP:MBO1929226.1;Name=MBO1929226.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012565.1;locus_tag=J4731_12485;product=hypothetical protein;protein_id=MBO1929226.1;transl_table=11
JAGETS010000022.1	Genbank	gene	42895	43143	.	+	.	ID=gene-J4731_12490;Name=J4731_12490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_12490
JAGETS010000022.1	Protein Homology	CDS	42895	43143	.	+	0	ID=cds-MBO1929227.1;Parent=gene-J4731_12490;Dbxref=NCBI_GP:MBO1929227.1;Name=MBO1929227.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012565.1;locus_tag=J4731_12490;product=molecular chaperone;protein_id=MBO1929227.1;transl_table=11
JAGETS010000022.1	Genbank	gene	43255	43350	.	+	.	ID=gene-J4731_12495;Name=J4731_12495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_12495
JAGETS010000022.1	Protein Homology	CDS	43255	43350	.	+	0	ID=cds-MBO1929228.1;Parent=gene-J4731_12495;Dbxref=NCBI_GP:MBO1929228.1;Name=MBO1929228.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014773.1;locus_tag=J4731_12495;product=hypothetical protein;protein_id=MBO1929228.1;transl_table=11
JAGETS010000022.1	Genbank	pseudogene	43501	46025	.	+	.	ID=gene-J4731_12500;Name=J4731_12500;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_12500;pseudo=true
JAGETS010000022.1	Protein Homology	CDS	43501	46025	.	+	0	ID=cds-J4731_12500;Parent=gene-J4731_12500;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014656926.1;locus_tag=J4731_12500;product=fimbrial biogenesis outer membrane usher protein;pseudo=true;transl_table=11
##sequence-region JAGETS010000023.1 1 120811
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=587
JAGETS010000023.1	Genbank	region	1	120811	.	+	.	ID=JAGETS010000023.1:1..120811;Dbxref=taxon:587;collected-by=NHLS;collection-date=2018;country=South Africa: Pretoria;gbkey=Src;isolation-source=stool;lat-lon=25.7479 S 28.2293 E;mol_type=genomic DNA;nat-host=porcine;strain=SG003
JAGETS010000023.1	Genbank	pseudogene	1	1241	.	-	.	ID=gene-J4731_12505;Name=J4731_12505;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_12505;pseudo=true
JAGETS010000023.1	Protein Homology	CDS	1	1241	.	-	0	ID=cds-J4731_12505;Parent=gene-J4731_12505;Note=frameshifted%3B incomplete%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004248701.1;locus_tag=J4731_12505;product=amino acid permease;pseudo=true;transl_table=11
JAGETS010000023.1	Genbank	pseudogene	1474	2140	.	+	.	ID=gene-J4731_12510;Name=queE;gbkey=Gene;gene=queE;gene_biotype=pseudogene;locus_tag=J4731_12510;pseudo=true
JAGETS010000023.1	Protein Homology	CDS	1474	2140	.	+	0	ID=cds-J4731_12510;Parent=gene-J4731_12510;Note=frameshifted;gbkey=CDS;gene=queE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006659391.1;locus_tag=J4731_12510;product=7-carboxy-7-deazaguanine synthase QueE;pseudo=true;transl_table=11
JAGETS010000023.1	Genbank	pseudogene	2204	2815	.	-	.	ID=gene-J4731_12515;Name=J4731_12515;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_12515;pseudo=true
JAGETS010000023.1	Protein Homology	CDS	2204	2815	.	-	0	ID=cds-J4731_12515;Parent=gene-J4731_12515;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004260761.1;locus_tag=J4731_12515;product=YagU family protein;pseudo=true;transl_table=11
JAGETS010000023.1	Genbank	pseudogene	3064	3453	.	-	.	ID=gene-J4731_12520;Name=queD;gbkey=Gene;gene=queD;gene_biotype=pseudogene;locus_tag=J4731_12520;pseudo=true
JAGETS010000023.1	Protein Homology	CDS	3064	3453	.	-	0	ID=cds-J4731_12520;Parent=gene-J4731_12520;Note=frameshifted;gbkey=CDS;gene=queD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000108295.1;locus_tag=J4731_12520;product=6-carboxytetrahydropterin synthase QueD;pseudo=true;transl_table=11
JAGETS010000023.1	Genbank	pseudogene	3824	5583	.	+	.	ID=gene-J4731_12525;Name=cysJ;gbkey=Gene;gene=cysJ;gene_biotype=pseudogene;locus_tag=J4731_12525;pseudo=true
JAGETS010000023.1	Protein Homology	CDS	3824	5583	.	+	0	ID=cds-J4731_12525;Parent=gene-J4731_12525;Note=frameshifted;gbkey=CDS;gene=cysJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006178253.1;locus_tag=J4731_12525;product=NADPH-dependent assimilatory sulfite reductase flavoprotein subunit;pseudo=true;transl_table=11
JAGETS010000023.1	Genbank	pseudogene	5645	7295	.	+	.	ID=gene-J4731_12530;Name=cysI;gbkey=Gene;gene=cysI;gene_biotype=pseudogene;locus_tag=J4731_12530;pseudo=true
JAGETS010000023.1	Protein Homology	CDS	5645	7295	.	+	0	ID=cds-J4731_12530;Parent=gene-J4731_12530;Note=frameshifted%3B internal stop;gbkey=CDS;gene=cysI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209382.1;locus_tag=J4731_12530;product=assimilatory sulfite reductase (NADPH) hemoprotein subunit;pseudo=true;transl_table=11
JAGETS010000023.1	Genbank	pseudogene	7292	8023	.	+	.	ID=gene-J4731_12535;Name=cysH;gbkey=Gene;gene=cysH;gene_biotype=pseudogene;locus_tag=J4731_12535;pseudo=true
JAGETS010000023.1	Protein Homology	CDS	7292	8023	.	+	0	ID=cds-J4731_12535;Parent=gene-J4731_12535;Note=frameshifted;gbkey=CDS;gene=cysH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006659387.1;locus_tag=J4731_12535;product=phosphoadenosine phosphosulfate reductase;pseudo=true;transl_table=11
JAGETS010000023.1	Genbank	pseudogene	8792	10184	.	+	.	ID=gene-J4731_12540;Name=cobA;gbkey=Gene;gene=cobA;gene_biotype=pseudogene;locus_tag=J4731_12540;pseudo=true
JAGETS010000023.1	Protein Homology	CDS	8792	10184	.	+	0	ID=cds-J4731_12540;Parent=gene-J4731_12540;Note=frameshifted;gbkey=CDS;gene=cobA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007795873.1;locus_tag=J4731_12540;product=uroporphyrinogen-III C-methyltransferase;pseudo=true;transl_table=11
JAGETS010000023.1	Genbank	pseudogene	10210	11074	.	+	.	ID=gene-J4731_12545;Name=cysD;gbkey=Gene;gene=cysD;gene_biotype=pseudogene;locus_tag=J4731_12545;pseudo=true
JAGETS010000023.1	Protein Homology	CDS	10210	11074	.	+	0	ID=cds-J4731_12545;Parent=gene-J4731_12545;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;gene=cysD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130891.1;locus_tag=J4731_12545;product=sulfate adenylyltransferase subunit CysD;pseudo=true;transl_table=11
JAGETS010000023.1	Genbank	pseudogene	11130	12558	.	+	.	ID=gene-J4731_12550;Name=cysN;gbkey=Gene;gene=cysN;gene_biotype=pseudogene;locus_tag=J4731_12550;pseudo=true
JAGETS010000023.1	Protein Homology	CDS	11130	12558	.	+	0	ID=cds-J4731_12550;Parent=gene-J4731_12550;Note=frameshifted;gbkey=CDS;gene=cysN;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006659384.1;locus_tag=J4731_12550;product=sulfate adenylyltransferase subunit CysN;pseudo=true;transl_table=11
JAGETS010000023.1	Genbank	pseudogene	12564	13166	.	+	.	ID=gene-J4731_12555;Name=cysC;gbkey=Gene;gene=cysC;gene_biotype=pseudogene;locus_tag=J4731_12555;pseudo=true
JAGETS010000023.1	Protein Homology	CDS	12564	13166	.	+	0	ID=cds-J4731_12555;Parent=gene-J4731_12555;Note=frameshifted%3B internal stop;gbkey=CDS;gene=cysC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004260739.1;locus_tag=J4731_12555;product=adenylyl-sulfate kinase;pseudo=true;transl_table=11
JAGETS010000023.1	Genbank	gene	13326	13613	.	+	.	ID=gene-J4731_12560;Name=ftsB;gbkey=Gene;gene=ftsB;gene_biotype=protein_coding;locus_tag=J4731_12560
JAGETS010000023.1	Protein Homology	CDS	13326	13613	.	+	0	ID=cds-MBO1929229.1;Parent=gene-J4731_12560;Dbxref=NCBI_GP:MBO1929229.1;Name=MBO1929229.1;gbkey=CDS;gene=ftsB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004922916.1;locus_tag=J4731_12560;product=cell division protein FtsB;protein_id=MBO1929229.1;transl_table=11
JAGETS010000023.1	Genbank	pseudogene	13681	14405	.	+	.	ID=gene-J4731_12565;Name=ispD;gbkey=Gene;gene=ispD;gene_biotype=pseudogene;locus_tag=J4731_12565;pseudo=true
JAGETS010000023.1	Protein Homology	CDS	13681	14405	.	+	0	ID=cds-J4731_12565;Parent=gene-J4731_12565;Note=frameshifted%3B internal stop;gbkey=CDS;gene=ispD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004260733.1;locus_tag=J4731_12565;product=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase;pseudo=true;transl_table=11
JAGETS010000023.1	Genbank	pseudogene	14414	14874	.	+	.	ID=gene-J4731_12570;Name=ispF;gbkey=Gene;gene=ispF;gene_biotype=pseudogene;locus_tag=J4731_12570;pseudo=true
JAGETS010000023.1	Protein Homology	CDS	14414	14874	.	+	0	ID=cds-J4731_12570;Parent=gene-J4731_12570;Note=frameshifted;gbkey=CDS;gene=ispF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311627.1;locus_tag=J4731_12570;product=2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase;pseudo=true;transl_table=11
JAGETS010000023.1	Genbank	pseudogene	14890	15939	.	+	.	ID=gene-J4731_12575;Name=truD;gbkey=Gene;gene=truD;gene_biotype=pseudogene;locus_tag=J4731_12575;pseudo=true
JAGETS010000023.1	Protein Homology	CDS	14890	15939	.	+	0	ID=cds-J4731_12575;Parent=gene-J4731_12575;Note=frameshifted;gbkey=CDS;gene=truD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011815611.1;locus_tag=J4731_12575;product=tRNA pseudouridine(13) synthase TruD;pseudo=true;transl_table=11
JAGETS010000023.1	Genbank	pseudogene	15917	16675	.	+	.	ID=gene-J4731_12580;Name=surE;gbkey=Gene;gene=surE;gene_biotype=pseudogene;locus_tag=J4731_12580;pseudo=true
JAGETS010000023.1	Protein Homology	CDS	15917	16675	.	+	0	ID=cds-J4731_12580;Parent=gene-J4731_12580;Note=frameshifted;gbkey=CDS;gene=surE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008910078.1;locus_tag=J4731_12580;product=5'/3'-nucleotidase SurE;pseudo=true;transl_table=11
JAGETS010000023.1	Genbank	gene	16672	17298	.	+	.	ID=gene-J4731_12585;Name=J4731_12585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_12585
JAGETS010000023.1	Protein Homology	CDS	16672	17298	.	+	0	ID=cds-MBO1929230.1;Parent=gene-J4731_12585;Dbxref=NCBI_GP:MBO1929230.1;Name=MBO1929230.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006815226.1;locus_tag=J4731_12585;product=protein-L-isoaspartate(D-aspartate) O-methyltransferase;protein_id=MBO1929230.1;transl_table=11
JAGETS010000023.1	Genbank	pseudogene	17605	18673	.	+	.	ID=gene-J4731_12590;Name=nlpD;gbkey=Gene;gene=nlpD;gene_biotype=pseudogene;locus_tag=J4731_12590;pseudo=true
JAGETS010000023.1	Protein Homology	CDS	17605	18673	.	+	0	ID=cds-J4731_12590;Parent=gene-J4731_12590;Note=frameshifted;gbkey=CDS;gene=nlpD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014656629.1;locus_tag=J4731_12590;product=murein hydrolase activator NlpD;pseudo=true;transl_table=11
JAGETS010000023.1	Genbank	pseudogene	18882	19710	.	+	.	ID=gene-J4731_12595;Name=rpoS;gbkey=Gene;gene=rpoS;gene_biotype=pseudogene;locus_tag=J4731_12595;pseudo=true
JAGETS010000023.1	Protein Homology	CDS	18882	19710	.	+	0	ID=cds-J4731_12595;Parent=gene-J4731_12595;Note=frameshifted;gbkey=CDS;gene=rpoS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228478.1;locus_tag=J4731_12595;product=RNA polymerase sigma factor RpoS;pseudo=true;transl_table=11
JAGETS010000023.1	Genbank	pseudogene	19789	20549	.	-	.	ID=gene-J4731_12600;Name=J4731_12600;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_12600;pseudo=true
JAGETS010000023.1	Protein Homology	CDS	19789	20549	.	-	0	ID=cds-J4731_12600;Parent=gene-J4731_12600;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006661021.1;locus_tag=J4731_12600;product=tRNA-(ms[2]io[6]A)-hydroxylase;pseudo=true;transl_table=11
JAGETS010000023.1	Genbank	pseudogene	20551	23104	.	-	.	ID=gene-J4731_12605;Name=mutS;gbkey=Gene;gene=mutS;gene_biotype=pseudogene;locus_tag=J4731_12605;pseudo=true
JAGETS010000023.1	Protein Homology	CDS	20551	23104	.	-	0	ID=cds-J4731_12605;Parent=gene-J4731_12605;Note=frameshifted%3B internal stop;gbkey=CDS;gene=mutS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006661022.1;locus_tag=J4731_12605;product=DNA mismatch repair protein MutS;pseudo=true;transl_table=11
JAGETS010000023.1	Genbank	pseudogene	23714	24321	.	-	.	ID=gene-J4731_12610;Name=J4731_12610;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_12610;pseudo=true
JAGETS010000023.1	Protein Homology	CDS	23714	24321	.	-	0	ID=cds-J4731_12610;Parent=gene-J4731_12610;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014658270.1;locus_tag=J4731_12610;product=Fic family protein;pseudo=true;transl_table=11
JAGETS010000023.1	Genbank	pseudogene	24883	26129	.	-	.	ID=gene-J4731_12615;Name=J4731_12615;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_12615;pseudo=true
JAGETS010000023.1	Protein Homology	CDS	24883	26129	.	-	0	ID=cds-J4731_12615;Parent=gene-J4731_12615;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004260716.1;locus_tag=J4731_12615;product=cytochrome c;pseudo=true;transl_table=11
JAGETS010000023.1	Genbank	pseudogene	26169	28386	.	-	.	ID=gene-J4731_12620;Name=J4731_12620;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_12620;pseudo=true
JAGETS010000023.1	Protein Homology	CDS	26169	28386	.	-	0	ID=cds-J4731_12620;Parent=gene-J4731_12620;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004938049.1;locus_tag=J4731_12620;product=xanthine dehydrogenase family protein molybdopterin-binding subunit;pseudo=true;transl_table=11
JAGETS010000023.1	Genbank	pseudogene	28438	28883	.	-	.	ID=gene-J4731_12625;Name=J4731_12625;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_12625;pseudo=true
JAGETS010000023.1	Protein Homology	CDS	28438	28883	.	-	0	ID=cds-J4731_12625;Parent=gene-J4731_12625;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015377926.1;locus_tag=J4731_12625;product=(2Fe-2S)-binding protein;pseudo=true;transl_table=11
JAGETS010000023.1	Genbank	pseudogene	29275	30510	.	-	.	ID=gene-J4731_12630;Name=J4731_12630;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_12630;pseudo=true
JAGETS010000023.1	Protein Homology	CDS	29275	30510	.	-	0	ID=cds-J4731_12630;Parent=gene-J4731_12630;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004260711.1;locus_tag=J4731_12630;product=cytochrome c;pseudo=true;transl_table=11
JAGETS010000023.1	Genbank	pseudogene	30585	31148	.	-	.	ID=gene-J4731_12635;Name=J4731_12635;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_12635;pseudo=true
JAGETS010000023.1	Protein Homology	CDS	30585	31148	.	-	0	ID=cds-J4731_12635;Parent=gene-J4731_12635;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004260707.1;locus_tag=J4731_12635;product=(2Fe-2S)-binding protein;pseudo=true;transl_table=11
JAGETS010000023.1	Genbank	pseudogene	31117	34035	.	-	.	ID=gene-J4731_12640;Name=J4731_12640;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_12640;pseudo=true
JAGETS010000023.1	Protein Homology	CDS	31117	34035	.	-	0	ID=cds-J4731_12640;Parent=gene-J4731_12640;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004260704.1;locus_tag=J4731_12640;product=xanthine dehydrogenase family protein molybdopterin-binding subunit;pseudo=true;transl_table=11
JAGETS010000023.1	Genbank	pseudogene	34372	35685	.	-	.	ID=gene-J4731_12645;Name=J4731_12645;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_12645;pseudo=true
JAGETS010000023.1	Protein Homology	CDS	34372	35685	.	-	0	ID=cds-J4731_12645;Parent=gene-J4731_12645;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016930076.1;locus_tag=J4731_12645;product=cytochrome c;pseudo=true;transl_table=11
JAGETS010000023.1	Genbank	pseudogene	35682	36230	.	-	.	ID=gene-J4731_12650;Name=J4731_12650;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_12650;pseudo=true
JAGETS010000023.1	Protein Homology	CDS	35682	36230	.	-	0	ID=cds-J4731_12650;Parent=gene-J4731_12650;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004937484.1;locus_tag=J4731_12650;product=(2Fe-2S)-binding protein;pseudo=true;transl_table=11
JAGETS010000023.1	Genbank	pseudogene	36227	38927	.	-	.	ID=gene-J4731_12655;Name=J4731_12655;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_12655;pseudo=true
JAGETS010000023.1	Protein Homology	CDS	36227	38927	.	-	0	ID=cds-J4731_12655;Parent=gene-J4731_12655;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012146720.1;locus_tag=J4731_12655;product=xanthine dehydrogenase family protein molybdopterin-binding subunit;pseudo=true;transl_table=11
JAGETS010000023.1	Genbank	pseudogene	39132	39692	.	+	.	ID=gene-J4731_12660;Name=J4731_12660;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_12660;pseudo=true
JAGETS010000023.1	Protein Homology	CDS	39132	39692	.	+	0	ID=cds-J4731_12660;Parent=gene-J4731_12660;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004260690.1;locus_tag=J4731_12660;product=nucleotidyltransferase family protein;pseudo=true;transl_table=11
JAGETS010000023.1	Genbank	pseudogene	39702	40684	.	+	.	ID=gene-J4731_12665;Name=J4731_12665;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_12665;pseudo=true
JAGETS010000023.1	Protein Homology	CDS	39702	40684	.	+	0	ID=cds-J4731_12665;Parent=gene-J4731_12665;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006813189.1;locus_tag=J4731_12665;product=XdhC family protein;pseudo=true;transl_table=11
JAGETS010000023.1	Genbank	pseudogene	40781	42440	.	-	.	ID=gene-J4731_12670;Name=J4731_12670;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_12670;pseudo=true
JAGETS010000023.1	Protein Homology	CDS	40781	42440	.	-	0	ID=cds-J4731_12670;Parent=gene-J4731_12670;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004260684.1;locus_tag=J4731_12670;product=alpha-keto acid decarboxylase family protein;pseudo=true;transl_table=11
JAGETS010000023.1	Genbank	pseudogene	42688	43032	.	-	.	ID=gene-J4731_12675;Name=J4731_12675;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_12675;pseudo=true
JAGETS010000023.1	Protein Homology	CDS	42688	43032	.	-	0	ID=cds-J4731_12675;Parent=gene-J4731_12675;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004260681.1;locus_tag=J4731_12675;product=RidA family protein;pseudo=true;transl_table=11
JAGETS010000023.1	Genbank	pseudogene	43082	44279	.	-	.	ID=gene-J4731_12680;Name=J4731_12680;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_12680;pseudo=true
JAGETS010000023.1	Protein Homology	CDS	43082	44279	.	-	0	ID=cds-J4731_12680;Parent=gene-J4731_12680;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004922786.1;locus_tag=J4731_12680;product=D-amino acid dehydrogenase;pseudo=true;transl_table=11
JAGETS010000023.1	Genbank	pseudogene	44336	45236	.	-	.	ID=gene-J4731_12685;Name=J4731_12685;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_12685;pseudo=true
JAGETS010000023.1	Protein Homology	CDS	44336	45236	.	-	0	ID=cds-J4731_12685;Parent=gene-J4731_12685;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006659364.1;locus_tag=J4731_12685;product=LysR family transcriptional regulator;pseudo=true;transl_table=11
JAGETS010000023.1	Genbank	pseudogene	45448	46646	.	-	.	ID=gene-J4731_12690;Name=gltS;gbkey=Gene;gene=gltS;gene_biotype=pseudogene;locus_tag=J4731_12690;pseudo=true
JAGETS010000023.1	Protein Homology	CDS	45448	46646	.	-	0	ID=cds-J4731_12690;Parent=gene-J4731_12690;Note=frameshifted;gbkey=CDS;gene=gltS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000599530.1;locus_tag=J4731_12690;product=sodium/glutamate symporter;pseudo=true;transl_table=11
JAGETS010000023.1	Genbank	gene	47309	47848	.	+	.	ID=gene-J4731_12695;Name=J4731_12695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_12695
JAGETS010000023.1	Protein Homology	CDS	47309	47848	.	+	0	ID=cds-MBO1929231.1;Parent=gene-J4731_12695;Dbxref=NCBI_GP:MBO1929231.1;Name=MBO1929231.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF037100.1;locus_tag=J4731_12695;product=nucleotidyltransferase domain-containing protein;protein_id=MBO1929231.1;transl_table=11
JAGETS010000023.1	Genbank	gene	47860	48045	.	+	.	ID=gene-J4731_12700;Name=J4731_12700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_12700
JAGETS010000023.1	Protein Homology	CDS	47860	48045	.	+	0	ID=cds-MBO1929232.1;Parent=gene-J4731_12700;Dbxref=NCBI_GP:MBO1929232.1;Name=MBO1929232.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024819.1;locus_tag=J4731_12700;product=DUF4111 domain-containing protein;protein_id=MBO1929232.1;transl_table=11
JAGETS010000023.1	Genbank	pseudogene	48209	48596	.	+	.	ID=gene-J4731_12705;Name=J4731_12705;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_12705;pseudo=true
JAGETS010000023.1	Protein Homology	CDS	48209	48596	.	+	0	ID=cds-J4731_12705;Parent=gene-J4731_12705;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004922750.1;locus_tag=J4731_12705;product=RidA family protein;pseudo=true;transl_table=11
JAGETS010000023.1	Genbank	pseudogene	48655	49988	.	-	.	ID=gene-J4731_12710;Name=J4731_12710;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_12710;pseudo=true
JAGETS010000023.1	Protein Homology	CDS	48655	49988	.	-	0	ID=cds-J4731_12710;Parent=gene-J4731_12710;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227916.1;locus_tag=J4731_12710;product=NCS2 family permease;pseudo=true;transl_table=11
JAGETS010000023.1	Genbank	pseudogene	50030	51801	.	-	.	ID=gene-J4731_12715;Name=J4731_12715;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_12715;pseudo=true
JAGETS010000023.1	Protein Homology	CDS	50030	51801	.	-	0	ID=cds-J4731_12715;Parent=gene-J4731_12715;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006659360.1;locus_tag=J4731_12715;product=adenine deaminase;pseudo=true;transl_table=11
JAGETS010000023.1	Genbank	pseudogene	51945	52930	.	+	.	ID=gene-J4731_12720;Name=J4731_12720;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_12720;pseudo=true
JAGETS010000023.1	Protein Homology	CDS	51945	52930	.	+	0	ID=cds-J4731_12720;Parent=gene-J4731_12720;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010433656.1;locus_tag=J4731_12720;product=LysR family transcriptional regulator;pseudo=true;transl_table=11
JAGETS010000023.1	Genbank	pseudogene	53031	53915	.	+	.	ID=gene-J4731_12725;Name=J4731_12725;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_12725;pseudo=true
JAGETS010000023.1	Protein Homology	CDS	53031	53915	.	+	0	ID=cds-J4731_12725;Parent=gene-J4731_12725;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004260642.1;locus_tag=J4731_12725;product=hypothetical protein;pseudo=true;transl_table=11
JAGETS010000023.1	Genbank	pseudogene	54099	54845	.	+	.	ID=gene-J4731_12730;Name=J4731_12730;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_12730;pseudo=true
JAGETS010000023.1	Protein Homology	CDS	54099	54845	.	+	0	ID=cds-J4731_12730;Parent=gene-J4731_12730;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006815203.1;locus_tag=J4731_12730;product=VWA domain-containing protein;pseudo=true;transl_table=11
JAGETS010000023.1	Genbank	gene	54920	56083	.	-	.	ID=gene-J4731_12735;Name=J4731_12735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_12735
JAGETS010000023.1	Protein Homology	CDS	54920	56083	.	-	0	ID=cds-MBO1929233.1;Parent=gene-J4731_12735;Dbxref=NCBI_GP:MBO1929233.1;Name=MBO1929233.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012367493.1;locus_tag=J4731_12735;product=Dyp-type peroxidase;protein_id=MBO1929233.1;transl_table=11
JAGETS010000023.1	Genbank	gene	55996	56184	.	-	.	ID=gene-J4731_12740;Name=J4731_12740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_12740
JAGETS010000023.1	GeneMarkS-2+	CDS	55996	56184	.	-	0	ID=cds-MBO1929234.1;Parent=gene-J4731_12740;Dbxref=NCBI_GP:MBO1929234.1;Name=MBO1929234.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_12740;product=hypothetical protein;protein_id=MBO1929234.1;transl_table=11
JAGETS010000023.1	Genbank	pseudogene	56196	57095	.	-	.	ID=gene-J4731_12745;Name=J4731_12745;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_12745;pseudo=true
JAGETS010000023.1	Protein Homology	CDS	56196	57095	.	-	0	ID=cds-J4731_12745;Parent=gene-J4731_12745;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004260627.1;locus_tag=J4731_12745;product=EfeM/EfeO family lipoprotein;pseudo=true;transl_table=11
JAGETS010000023.1	Genbank	pseudogene	57090	57917	.	-	.	ID=gene-J4731_12750;Name=J4731_12750;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_12750;pseudo=true
JAGETS010000023.1	Protein Homology	CDS	57090	57917	.	-	0	ID=cds-J4731_12750;Parent=gene-J4731_12750;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008910114.1;locus_tag=J4731_12750;product=FTR1 family protein;pseudo=true;transl_table=11
JAGETS010000023.1	Genbank	pseudogene	57929	58255	.	-	.	ID=gene-J4731_12755;Name=J4731_12755;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_12755;pseudo=true
JAGETS010000023.1	Protein Homology	CDS	57929	58255	.	-	0	ID=cds-J4731_12755;Parent=gene-J4731_12755;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006815199.1;locus_tag=J4731_12755;product=cupredoxin domain-containing protein;pseudo=true;transl_table=11
JAGETS010000023.1	Genbank	pseudogene	58349	58901	.	-	.	ID=gene-J4731_12760;Name=J4731_12760;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_12760;pseudo=true
JAGETS010000023.1	Protein Homology	CDS	58349	58901	.	-	0	ID=cds-J4731_12760;Parent=gene-J4731_12760;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014656600.1;locus_tag=J4731_12760;product=iron transporter;pseudo=true;transl_table=11
JAGETS010000023.1	Genbank	pseudogene	59169	60085	.	+	.	ID=gene-J4731_12765;Name=J4731_12765;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_12765;pseudo=true
JAGETS010000023.1	Protein Homology	CDS	59169	60085	.	+	0	ID=cds-J4731_12765;Parent=gene-J4731_12765;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014656599.1;locus_tag=J4731_12765;product=haloacid dehalogenase-like hydrolase;pseudo=true;transl_table=11
JAGETS010000023.1	Genbank	pseudogene	60279	61605	.	+	.	ID=gene-J4731_12770;Name=rimO;gbkey=Gene;gene=rimO;gene_biotype=pseudogene;locus_tag=J4731_12770;pseudo=true
JAGETS010000023.1	Protein Homology	CDS	60279	61605	.	+	0	ID=cds-J4731_12770;Parent=gene-J4731_12770;Note=frameshifted;gbkey=CDS;gene=rimO;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004260618.1;locus_tag=J4731_12770;product=30S ribosomal protein S12 methylthiotransferase RimO;pseudo=true;transl_table=11
JAGETS010000023.1	Genbank	gene	62119	62376	.	+	.	ID=gene-J4731_12775;Name=J4731_12775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_12775
JAGETS010000023.1	GeneMarkS-2+	CDS	62119	62376	.	+	0	ID=cds-MBO1929235.1;Parent=gene-J4731_12775;Dbxref=NCBI_GP:MBO1929235.1;Name=MBO1929235.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_12775;product=hypothetical protein;protein_id=MBO1929235.1;transl_table=11
JAGETS010000023.1	Genbank	gene	62339	62452	.	+	.	ID=gene-J4731_12780;Name=J4731_12780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_12780
JAGETS010000023.1	Protein Homology	CDS	62339	62452	.	+	0	ID=cds-MBO1929236.1;Parent=gene-J4731_12780;Dbxref=NCBI_GP:MBO1929236.1;Name=MBO1929236.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014950.1;locus_tag=J4731_12780;product=hypothetical protein;protein_id=MBO1929236.1;transl_table=11
JAGETS010000023.1	Genbank	pseudogene	63042	63667	.	-	.	ID=gene-J4731_12785;Name=J4731_12785;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_12785;pseudo=true
JAGETS010000023.1	Protein Homology	CDS	63042	63667	.	-	0	ID=cds-J4731_12785;Parent=gene-J4731_12785;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014656595.1;locus_tag=J4731_12785;product=helix-turn-helix transcriptional regulator;pseudo=true;transl_table=11
JAGETS010000023.1	Genbank	pseudogene	64177	65111	.	+	.	ID=gene-J4731_12790;Name=J4731_12790;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_12790;pseudo=true
JAGETS010000023.1	Protein Homology	CDS	64177	65111	.	+	0	ID=cds-J4731_12790;Parent=gene-J4731_12790;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011906293.1;locus_tag=J4731_12790;product=LacI family DNA-binding transcriptional regulator;pseudo=true;transl_table=11
JAGETS010000023.1	Genbank	pseudogene	65152	66497	.	-	.	ID=gene-J4731_12795;Name=J4731_12795;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_12795;pseudo=true
JAGETS010000023.1	Protein Homology	CDS	65152	66497	.	-	0	ID=cds-J4731_12795;Parent=gene-J4731_12795;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004922676.1;locus_tag=J4731_12795;product=glycoside hydrolase family 32 protein;pseudo=true;transl_table=11
JAGETS010000023.1	Genbank	pseudogene	66854	67764	.	+	.	ID=gene-J4731_12800;Name=J4731_12800;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_12800;pseudo=true
JAGETS010000023.1	Protein Homology	CDS	66854	67764	.	+	0	ID=cds-J4731_12800;Parent=gene-J4731_12800;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004244286.1;locus_tag=J4731_12800;product=aminoimidazole riboside kinase;pseudo=true;transl_table=11
JAGETS010000023.1	Genbank	pseudogene	67905	68817	.	+	.	ID=gene-J4731_12805;Name=rarD;gbkey=Gene;gene=rarD;gene_biotype=pseudogene;locus_tag=J4731_12805;pseudo=true
JAGETS010000023.1	Protein Homology	CDS	67905	68817	.	+	0	ID=cds-J4731_12805;Parent=gene-J4731_12805;Note=frameshifted;gbkey=CDS;gene=rarD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004922670.1;locus_tag=J4731_12805;product=EamA family transporter RarD;pseudo=true;transl_table=11
JAGETS010000023.1	Genbank	pseudogene	68944	70110	.	+	.	ID=gene-J4731_12810;Name=purT;gbkey=Gene;gene=purT;gene_biotype=pseudogene;locus_tag=J4731_12810;pseudo=true
JAGETS010000023.1	Protein Homology	CDS	68944	70110	.	+	0	ID=cds-J4731_12810;Parent=gene-J4731_12810;Note=frameshifted;gbkey=CDS;gene=purT;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004922667.1;locus_tag=J4731_12810;product=formate-dependent phosphoribosylglycinamide formyltransferase;pseudo=true;transl_table=11
JAGETS010000023.1	Genbank	pseudogene	70364	70784	.	+	.	ID=gene-J4731_12815;Name=J4731_12815;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_12815;pseudo=true
JAGETS010000023.1	Protein Homology	CDS	70364	70784	.	+	0	ID=cds-J4731_12815;Parent=gene-J4731_12815;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006659344.1;locus_tag=J4731_12815;product=WG repeat-containing protein;pseudo=true;transl_table=11
JAGETS010000023.1	Genbank	pseudogene	71239	73325	.	+	.	ID=gene-J4731_12820;Name=J4731_12820;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_12820;pseudo=true
JAGETS010000023.1	Protein Homology	CDS	71239	73325	.	+	0	ID=cds-J4731_12820;Parent=gene-J4731_12820;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017891486.1;locus_tag=J4731_12820;product=carbon starvation protein A;pseudo=true;transl_table=11
JAGETS010000023.1	Genbank	gene	73427	73630	.	+	.	ID=gene-J4731_12825;Name=J4731_12825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_12825
JAGETS010000023.1	Protein Homology	CDS	73427	73630	.	+	0	ID=cds-MBO1929237.1;Parent=gene-J4731_12825;Dbxref=NCBI_GP:MBO1929237.1;Name=MBO1929237.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313339.1;locus_tag=J4731_12825;product=YbdD/YjiX family protein;protein_id=MBO1929237.1;transl_table=11
JAGETS010000023.1	Genbank	pseudogene	73653	74599	.	+	.	ID=gene-J4731_12830;Name=yjiA;gbkey=Gene;gene=yjiA;gene_biotype=pseudogene;locus_tag=J4731_12830;pseudo=true
JAGETS010000023.1	Protein Homology	CDS	73653	74599	.	+	0	ID=cds-J4731_12830;Parent=gene-J4731_12830;Note=frameshifted;gbkey=CDS;gene=yjiA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015376486.1;locus_tag=J4731_12830;product=GTPase;pseudo=true;transl_table=11
JAGETS010000023.1	Genbank	pseudogene	74856	76177	.	-	.	ID=gene-J4731_12835;Name=J4731_12835;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_12835;pseudo=true
JAGETS010000023.1	Protein Homology	CDS	74856	76177	.	-	0	ID=cds-J4731_12835;Parent=gene-J4731_12835;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013098874.1;locus_tag=J4731_12835;product=serine dehydratase subunit alpha family protein;pseudo=true;transl_table=11
JAGETS010000023.1	Genbank	pseudogene	76391	77705	.	-	.	ID=gene-J4731_12840;Name=J4731_12840;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_12840;pseudo=true
JAGETS010000023.1	Protein Homology	CDS	76391	77705	.	-	0	ID=cds-J4731_12840;Parent=gene-J4731_12840;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013087644.1;locus_tag=J4731_12840;product=MATE family efflux transporter;pseudo=true;transl_table=11
JAGETS010000023.1	Genbank	pseudogene	77911	78804	.	+	.	ID=gene-J4731_12845;Name=J4731_12845;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_12845;pseudo=true
JAGETS010000023.1	Protein Homology	CDS	77911	78804	.	+	0	ID=cds-J4731_12845;Parent=gene-J4731_12845;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008910135.1;locus_tag=J4731_12845;product=diaminopimelate dehydrogenase;pseudo=true;transl_table=11
JAGETS010000023.1	Genbank	pseudogene	79019	79629	.	+	.	ID=gene-J4731_12850;Name=J4731_12850;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_12850;pseudo=true
JAGETS010000023.1	Protein Homology	CDS	79019	79629	.	+	0	ID=cds-J4731_12850;Parent=gene-J4731_12850;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006661044.1;locus_tag=J4731_12850;product=hypothetical protein;pseudo=true;transl_table=11
JAGETS010000023.1	Genbank	pseudogene	79760	80539	.	-	.	ID=gene-J4731_12855;Name=J4731_12855;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_12855;pseudo=true
JAGETS010000023.1	Protein Homology	CDS	79760	80539	.	-	0	ID=cds-J4731_12855;Parent=gene-J4731_12855;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013649046.1;locus_tag=J4731_12855;product=phosphoenolpyruvate hydrolase family protein;pseudo=true;transl_table=11
JAGETS010000023.1	Genbank	pseudogene	80593	81805	.	-	.	ID=gene-J4731_12860;Name=J4731_12860;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_12860;pseudo=true
JAGETS010000023.1	Protein Homology	CDS	80593	81805	.	-	0	ID=cds-J4731_12860;Parent=gene-J4731_12860;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006659334.1;locus_tag=J4731_12860;product=Tm-1-like ATP-binding domain-containing protein;pseudo=true;transl_table=11
JAGETS010000023.1	Genbank	pseudogene	82178	82808	.	+	.	ID=gene-J4731_12865;Name=J4731_12865;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_12865;pseudo=true
JAGETS010000023.1	Protein Homology	CDS	82178	82808	.	+	0	ID=cds-J4731_12865;Parent=gene-J4731_12865;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004260563.1;locus_tag=J4731_12865;product=TetR/AcrR family transcriptional regulator;pseudo=true;transl_table=11
JAGETS010000023.1	Genbank	pseudogene	83004	84047	.	+	.	ID=gene-J4731_12870;Name=J4731_12870;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_12870;pseudo=true
JAGETS010000023.1	Protein Homology	CDS	83004	84047	.	+	0	ID=cds-J4731_12870;Parent=gene-J4731_12870;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004260558.1;locus_tag=J4731_12870;product=AbrB family transcriptional regulator;pseudo=true;transl_table=11
JAGETS010000023.1	Genbank	pseudogene	84107	84453	.	-	.	ID=gene-J4731_12875;Name=J4731_12875;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_12875;pseudo=true
JAGETS010000023.1	Protein Homology	CDS	84107	84453	.	-	0	ID=cds-J4731_12875;Parent=gene-J4731_12875;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004922605.1;locus_tag=J4731_12875;product=YacC family pilotin-like protein;pseudo=true;transl_table=11
JAGETS010000023.1	Genbank	pseudogene	84692	86321	.	+	.	ID=gene-J4731_12880;Name=cueO;gbkey=Gene;gene=cueO;gene_biotype=pseudogene;locus_tag=J4731_12880;pseudo=true
JAGETS010000023.1	Protein Homology	CDS	84692	86321	.	+	0	ID=cds-J4731_12880;Parent=gene-J4731_12880;Note=frameshifted;gbkey=CDS;gene=cueO;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006661050.1;locus_tag=J4731_12880;product=multicopper oxidase CueO;pseudo=true;transl_table=11
JAGETS010000023.1	Genbank	pseudogene	86448	86985	.	+	.	ID=gene-J4731_12885;Name=hpt;gbkey=Gene;gene=hpt;gene_biotype=pseudogene;locus_tag=J4731_12885;pseudo=true
JAGETS010000023.1	Protein Homology	CDS	86448	86985	.	+	0	ID=cds-J4731_12885;Parent=gene-J4731_12885;Note=frameshifted;gbkey=CDS;gene=hpt;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004706234.1;locus_tag=J4731_12885;product=hypoxanthine phosphoribosyltransferase;pseudo=true;transl_table=11
JAGETS010000023.1	Genbank	gene	87133	87531	.	-	.	ID=gene-J4731_12890;Name=J4731_12890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_12890
JAGETS010000023.1	Protein Homology	CDS	87133	87531	.	-	0	ID=cds-MBO1929238.1;Parent=gene-J4731_12890;Dbxref=NCBI_GP:MBO1929238.1;Name=MBO1929238.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012635.1;locus_tag=J4731_12890;product=type 1 fimbrial protein;protein_id=MBO1929238.1;transl_table=11
JAGETS010000023.1	Genbank	gene	87644	87808	.	-	.	ID=gene-J4731_12895;Name=J4731_12895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_12895
JAGETS010000023.1	GeneMarkS-2+	CDS	87644	87808	.	-	0	ID=cds-MBO1929239.1;Parent=gene-J4731_12895;Dbxref=NCBI_GP:MBO1929239.1;Name=MBO1929239.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_12895;product=hypothetical protein;protein_id=MBO1929239.1;transl_table=11
JAGETS010000023.1	Genbank	gene	87772	87990	.	-	.	ID=gene-J4731_12900;Name=J4731_12900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_12900
JAGETS010000023.1	GeneMarkS-2+	CDS	87772	87990	.	-	0	ID=cds-MBO1929240.1;Parent=gene-J4731_12900;Dbxref=NCBI_GP:MBO1929240.1;Name=MBO1929240.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_12900;product=hypothetical protein;protein_id=MBO1929240.1;transl_table=11
JAGETS010000023.1	Genbank	gene	87987	88145	.	-	.	ID=gene-J4731_12905;Name=J4731_12905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_12905
JAGETS010000023.1	GeneMarkS-2+	CDS	87987	88145	.	-	0	ID=cds-MBO1929241.1;Parent=gene-J4731_12905;Dbxref=NCBI_GP:MBO1929241.1;Name=MBO1929241.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_12905;product=hypothetical protein;protein_id=MBO1929241.1;transl_table=11
JAGETS010000023.1	Genbank	pseudogene	88206	89219	.	-	.	ID=gene-J4731_12910;Name=J4731_12910;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_12910;pseudo=true
JAGETS010000023.1	Protein Homology	CDS	88206	89219	.	-	0	ID=cds-J4731_12910;Parent=gene-J4731_12910;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004260537.1;locus_tag=J4731_12910;product=fimbrial protein;pseudo=true;transl_table=11
JAGETS010000023.1	Genbank	pseudogene	89234	91780	.	-	.	ID=gene-J4731_12915;Name=J4731_12915;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_12915;pseudo=true
JAGETS010000023.1	Protein Homology	CDS	89234	91780	.	-	0	ID=cds-J4731_12915;Parent=gene-J4731_12915;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004260533.1;locus_tag=J4731_12915;product=fimbrial biogenesis outer membrane usher protein;pseudo=true;transl_table=11
JAGETS010000023.1	Genbank	gene	92000	92245	.	-	.	ID=gene-J4731_12920;Name=J4731_12920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_12920
JAGETS010000023.1	Protein Homology	CDS	92000	92245	.	-	0	ID=cds-MBO1929242.1;Parent=gene-J4731_12920;Dbxref=NCBI_GP:MBO1929242.1;Name=MBO1929242.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012565.1;locus_tag=J4731_12920;product=molecular chaperone;protein_id=MBO1929242.1;transl_table=11
JAGETS010000023.1	Genbank	gene	92345	92470	.	-	.	ID=gene-J4731_12925;Name=J4731_12925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_12925
JAGETS010000023.1	GeneMarkS-2+	CDS	92345	92470	.	-	0	ID=cds-MBO1929243.1;Parent=gene-J4731_12925;Dbxref=NCBI_GP:MBO1929243.1;Name=MBO1929243.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_12925;product=molecular chaperone;protein_id=MBO1929243.1;transl_table=11
JAGETS010000023.1	Genbank	pseudogene	92517	93057	.	-	.	ID=gene-J4731_12930;Name=J4731_12930;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_12930;pseudo=true
JAGETS010000023.1	Protein Homology	CDS	92517	93057	.	-	0	ID=cds-J4731_12930;Parent=gene-J4731_12930;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004260526.1;locus_tag=J4731_12930;product=fimbrial protein;pseudo=true;transl_table=11
JAGETS010000023.1	Genbank	pseudogene	93799	94564	.	-	.	ID=gene-J4731_12935;Name=J4731_12935;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_12935;pseudo=true
JAGETS010000023.1	Protein Homology	CDS	93799	94564	.	-	0	ID=cds-J4731_12935;Parent=gene-J4731_12935;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001747261.1;locus_tag=J4731_12935;product=ABC transporter permease;pseudo=true;transl_table=11
JAGETS010000023.1	Genbank	pseudogene	94601	95497	.	-	.	ID=gene-J4731_12940;Name=J4731_12940;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_12940;pseudo=true
JAGETS010000023.1	Protein Homology	CDS	94601	95497	.	-	0	ID=cds-J4731_12940;Parent=gene-J4731_12940;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459177.1;locus_tag=J4731_12940;product=ABC transporter ATP-binding protein;pseudo=true;transl_table=11
JAGETS010000023.1	Genbank	gene	95751	96407	.	+	.	ID=gene-J4731_12945;Name=can;gbkey=Gene;gene=can;gene_biotype=protein_coding;locus_tag=J4731_12945
JAGETS010000023.1	Protein Homology	CDS	95751	96407	.	+	0	ID=cds-MBO1929244.1;Parent=gene-J4731_12945;Dbxref=NCBI_GP:MBO1929244.1;Name=MBO1929244.1;gbkey=CDS;gene=can;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006659328.1;locus_tag=J4731_12945;product=carbonate dehydratase;protein_id=MBO1929244.1;transl_table=11
JAGETS010000023.1	Genbank	gene	96547	96978	.	-	.	ID=gene-J4731_12950;Name=panD;gbkey=Gene;gene=panD;gene_biotype=protein_coding;locus_tag=J4731_12950
JAGETS010000023.1	Protein Homology	CDS	96547	96978	.	-	0	ID=cds-MBO1929245.1;Parent=gene-J4731_12950;Dbxref=NCBI_GP:MBO1929245.1;Name=MBO1929245.1;gbkey=CDS;gene=panD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015673742.1;locus_tag=J4731_12950;product=aspartate 1-decarboxylase;protein_id=MBO1929245.1;transl_table=11
JAGETS010000023.1	Genbank	pseudogene	97214	98071	.	-	.	ID=gene-J4731_12955;Name=panC;gbkey=Gene;gene=panC;gene_biotype=pseudogene;locus_tag=J4731_12955;pseudo=true
JAGETS010000023.1	Protein Homology	CDS	97214	98071	.	-	0	ID=cds-J4731_12955;Parent=gene-J4731_12955;Note=frameshifted;gbkey=CDS;gene=panC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006661055.1;locus_tag=J4731_12955;product=pantoate--beta-alanine ligase;pseudo=true;transl_table=11
JAGETS010000023.1	Genbank	pseudogene	98098	98889	.	-	.	ID=gene-J4731_12960;Name=panB;gbkey=Gene;gene=panB;gene_biotype=pseudogene;locus_tag=J4731_12960;pseudo=true
JAGETS010000023.1	Protein Homology	CDS	98098	98889	.	-	0	ID=cds-J4731_12960;Parent=gene-J4731_12960;Note=frameshifted;gbkey=CDS;gene=panB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011094836.1;locus_tag=J4731_12960;product=3-methyl-2-oxobutanoate hydroxymethyltransferase;pseudo=true;transl_table=11
JAGETS010000023.1	Genbank	pseudogene	98947	99424	.	-	.	ID=gene-J4731_12965;Name=folK;gbkey=Gene;gene=folK;gene_biotype=pseudogene;locus_tag=J4731_12965;pseudo=true
JAGETS010000023.1	Protein Homology	CDS	98947	99424	.	-	0	ID=cds-J4731_12965;Parent=gene-J4731_12965;Note=frameshifted;gbkey=CDS;gene=folK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004260498.1;locus_tag=J4731_12965;product=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase;pseudo=true;transl_table=11
JAGETS010000023.1	Genbank	pseudogene	99449	100764	.	-	.	ID=gene-J4731_12970;Name=pcnB;gbkey=Gene;gene=pcnB;gene_biotype=pseudogene;locus_tag=J4731_12970;pseudo=true
JAGETS010000023.1	Protein Homology	CDS	99449	100764	.	-	0	ID=cds-J4731_12970;Parent=gene-J4731_12970;Note=frameshifted;gbkey=CDS;gene=pcnB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008910161.1;locus_tag=J4731_12970;product=polynucleotide adenylyltransferase PcnB;pseudo=true;transl_table=11
JAGETS010000023.1	Genbank	pseudogene	101486	101938	.	-	.	ID=gene-J4731_12975;Name=dksA;gbkey=Gene;gene=dksA;gene_biotype=pseudogene;locus_tag=J4731_12975;pseudo=true
JAGETS010000023.1	Protein Homology	CDS	101486	101938	.	-	0	ID=cds-J4731_12975;Parent=gene-J4731_12975;Note=frameshifted;gbkey=CDS;gene=dksA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209354.1;locus_tag=J4731_12975;product=RNA polymerase-binding protein DksA;pseudo=true;transl_table=11
JAGETS010000023.1	Genbank	pseudogene	102131	102840	.	-	.	ID=gene-J4731_12980;Name=sfsA;gbkey=Gene;gene=sfsA;gene_biotype=pseudogene;locus_tag=J4731_12980;pseudo=true
JAGETS010000023.1	Protein Homology	CDS	102131	102840	.	-	0	ID=cds-J4731_12980;Parent=gene-J4731_12980;Note=frameshifted;gbkey=CDS;gene=sfsA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004260493.1;locus_tag=J4731_12980;product=DNA/RNA nuclease SfsA;pseudo=true;transl_table=11
JAGETS010000023.1	Genbank	pseudogene	102938	105375	.	+	.	ID=gene-J4731_12985;Name=hrpB;gbkey=Gene;gene=hrpB;gene_biotype=pseudogene;locus_tag=J4731_12985;pseudo=true
JAGETS010000023.1	Protein Homology	CDS	102938	105375	.	+	0	ID=cds-J4731_12985;Parent=gene-J4731_12985;Note=frameshifted;gbkey=CDS;gene=hrpB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006661058.1;locus_tag=J4731_12985;product=ATP-dependent helicase HrpB;pseudo=true;transl_table=11
JAGETS010000023.1	Genbank	pseudogene	105563	108049	.	+	.	ID=gene-J4731_12990;Name=mrcB;gbkey=Gene;gene=mrcB;gene_biotype=pseudogene;locus_tag=J4731_12990;pseudo=true
JAGETS010000023.1	Protein Homology	CDS	105563	108049	.	+	0	ID=cds-J4731_12990;Parent=gene-J4731_12990;Note=frameshifted%3B internal stop;gbkey=CDS;gene=mrcB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011145250.1;locus_tag=J4731_12990;product=bifunctional glycosyl transferase/transpeptidase;pseudo=true;transl_table=11
JAGETS010000023.1	Genbank	pseudogene	108944	110201	.	-	.	ID=gene-J4731_12995;Name=hemL;gbkey=Gene;gene=hemL;gene_biotype=pseudogene;locus_tag=J4731_12995;pseudo=true
JAGETS010000023.1	Protein Homology	CDS	108944	110201	.	-	0	ID=cds-J4731_12995;Parent=gene-J4731_12995;Note=frameshifted%3B internal stop;gbkey=CDS;gene=hemL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005276511.1;locus_tag=J4731_12995;product=glutamate-1-semialdehyde 2%2C1-aminomutase;pseudo=true;transl_table=11
JAGETS010000023.1	Genbank	pseudogene	110416	110749	.	+	.	ID=gene-J4731_13000;Name=erpA;gbkey=Gene;gene=erpA;gene_biotype=pseudogene;locus_tag=J4731_13000;pseudo=true
JAGETS010000023.1	Protein Homology	CDS	110416	110749	.	+	0	ID=cds-J4731_13000;Parent=gene-J4731_13000;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;gene=erpA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004706254.1;locus_tag=J4731_13000;product=iron-sulfur cluster insertion protein ErpA;pseudo=true;transl_table=11
JAGETS010000023.1	Genbank	pseudogene	110919	111741	.	-	.	ID=gene-J4731_13005;Name=btuF;gbkey=Gene;gene=btuF;gene_biotype=pseudogene;locus_tag=J4731_13005;pseudo=true
JAGETS010000023.1	Protein Homology	CDS	110919	111741	.	-	0	ID=cds-J4731_13005;Parent=gene-J4731_13005;Note=frameshifted;gbkey=CDS;gene=btuF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004260477.1;locus_tag=J4731_13005;product=vitamin B12 ABC transporter substrate-binding protein BtuF;pseudo=true;transl_table=11
JAGETS010000023.1	Genbank	pseudogene	111826	112483	.	-	.	ID=gene-J4731_13010;Name=mtnN;gbkey=Gene;gene=mtnN;gene_biotype=pseudogene;locus_tag=J4731_13010;pseudo=true
JAGETS010000023.1	Protein Homology	CDS	111826	112483	.	-	0	ID=cds-J4731_13010;Parent=gene-J4731_13010;Note=frameshifted;gbkey=CDS;gene=mtnN;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004244989.1;locus_tag=J4731_13010;product=5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase;pseudo=true;transl_table=11
JAGETS010000023.1	Genbank	pseudogene	112737	114256	.	+	.	ID=gene-J4731_13015;Name=dgt;gbkey=Gene;gene=dgt;gene_biotype=pseudogene;locus_tag=J4731_13015;pseudo=true
JAGETS010000023.1	Protein Homology	CDS	112737	114256	.	+	0	ID=cds-J4731_13015;Parent=gene-J4731_13015;Note=frameshifted;gbkey=CDS;gene=dgt;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004922499.1;locus_tag=J4731_13015;product=dGTPase;pseudo=true;transl_table=11
JAGETS010000023.1	Genbank	pseudogene	114430	115754	.	+	.	ID=gene-J4731_13020;Name=rlmD;gbkey=Gene;gene=rlmD;gene_biotype=pseudogene;locus_tag=J4731_13020;pseudo=true
JAGETS010000023.1	Protein Homology	CDS	114430	115754	.	+	0	ID=cds-J4731_13020;Parent=gene-J4731_13020;Note=frameshifted;gbkey=CDS;gene=rlmD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004260469.1;locus_tag=J4731_13020;product=23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD;pseudo=true;transl_table=11
JAGETS010000023.1	Genbank	pseudogene	115770	117987	.	+	.	ID=gene-J4731_13025;Name=relA;gbkey=Gene;gene=relA;gene_biotype=pseudogene;locus_tag=J4731_13025;pseudo=true
JAGETS010000023.1	Protein Homology	CDS	115770	117987	.	+	0	ID=cds-J4731_13025;Parent=gene-J4731_13025;Note=frameshifted;gbkey=CDS;gene=relA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008910173.1;locus_tag=J4731_13025;product=GTP diphosphokinase;pseudo=true;transl_table=11
JAGETS010000023.1	Genbank	pseudogene	118578	119323	.	+	.	ID=gene-J4731_13030;Name=mazG;gbkey=Gene;gene=mazG;gene_biotype=pseudogene;locus_tag=J4731_13030;pseudo=true
JAGETS010000023.1	Protein Homology	CDS	118578	119323	.	+	0	ID=cds-J4731_13030;Parent=gene-J4731_13030;Note=frameshifted;gbkey=CDS;gene=mazG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005974675.1;locus_tag=J4731_13030;product=nucleoside triphosphate pyrophosphohydrolase;pseudo=true;transl_table=11
JAGETS010000023.1	Genbank	pseudogene	120114	120811	.	+	.	ID=gene-J4731_13035;Name=J4731_13035;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_13035;pseudo=true
JAGETS010000023.1	Protein Homology	CDS	120114	120811	.	+	0	ID=cds-J4731_13035;Parent=gene-J4731_13035;Note=frameshifted%3B internal stop%3B incomplete%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004875042.1;locus_tag=J4731_13035;product=CTP synthase;pseudo=true;transl_table=11
##sequence-region JAGETS010000024.1 1 101968
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=587
JAGETS010000024.1	Genbank	region	1	101968	.	+	.	ID=JAGETS010000024.1:1..101968;Dbxref=taxon:587;collected-by=NHLS;collection-date=2018;country=South Africa: Pretoria;gbkey=Src;isolation-source=stool;lat-lon=25.7479 S 28.2293 E;mol_type=genomic DNA;nat-host=porcine;strain=SG003
JAGETS010000024.1	Genbank	gene	251	637	.	-	.	ID=gene-J4731_13040;Name=J4731_13040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_13040
JAGETS010000024.1	GeneMarkS-2+	CDS	251	637	.	-	0	ID=cds-MBO1929246.1;Parent=gene-J4731_13040;Dbxref=NCBI_GP:MBO1929246.1;Name=MBO1929246.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_13040;product=hypothetical protein;protein_id=MBO1929246.1;transl_table=11
JAGETS010000024.1	Genbank	gene	967	1125	.	-	.	ID=gene-J4731_13045;Name=J4731_13045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_13045
JAGETS010000024.1	GeneMarkS-2+	CDS	967	1125	.	-	0	ID=cds-MBO1929247.1;Parent=gene-J4731_13045;Dbxref=NCBI_GP:MBO1929247.1;Name=MBO1929247.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_13045;product=hypothetical protein;protein_id=MBO1929247.1;transl_table=11
JAGETS010000024.1	Genbank	gene	1223	1615	.	-	.	ID=gene-J4731_13050;Name=J4731_13050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_13050
JAGETS010000024.1	GeneMarkS-2+	CDS	1223	1615	.	-	0	ID=cds-MBO1929248.1;Parent=gene-J4731_13050;Dbxref=NCBI_GP:MBO1929248.1;Name=MBO1929248.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_13050;product=hypothetical protein;protein_id=MBO1929248.1;transl_table=11
JAGETS010000024.1	Genbank	gene	1786	1947	.	-	.	ID=gene-J4731_13055;Name=J4731_13055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_13055
JAGETS010000024.1	GeneMarkS-2+	CDS	1786	1947	.	-	0	ID=cds-MBO1929249.1;Parent=gene-J4731_13055;Dbxref=NCBI_GP:MBO1929249.1;Name=MBO1929249.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_13055;product=hypothetical protein;protein_id=MBO1929249.1;transl_table=11
JAGETS010000024.1	Genbank	gene	2277	2687	.	-	.	ID=gene-J4731_13060;Name=J4731_13060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_13060
JAGETS010000024.1	GeneMarkS-2+	CDS	2277	2687	.	-	0	ID=cds-MBO1929250.1;Parent=gene-J4731_13060;Dbxref=NCBI_GP:MBO1929250.1;Name=MBO1929250.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_13060;product=hypothetical protein;protein_id=MBO1929250.1;transl_table=11
JAGETS010000024.1	Genbank	gene	3216	3512	.	-	.	ID=gene-J4731_13065;Name=J4731_13065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_13065
JAGETS010000024.1	GeneMarkS-2+	CDS	3216	3512	.	-	0	ID=cds-MBO1929251.1;Parent=gene-J4731_13065;Dbxref=NCBI_GP:MBO1929251.1;Name=MBO1929251.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_13065;product=hypothetical protein;protein_id=MBO1929251.1;transl_table=11
JAGETS010000024.1	Genbank	gene	3531	4052	.	-	.	ID=gene-J4731_13070;Name=J4731_13070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_13070
JAGETS010000024.1	Protein Homology	CDS	3531	4052	.	-	0	ID=cds-MBO1929252.1;Parent=gene-J4731_13070;Dbxref=NCBI_GP:MBO1929252.1;Name=MBO1929252.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008910405.1;locus_tag=J4731_13070;product=hypothetical protein;protein_id=MBO1929252.1;transl_table=11
JAGETS010000024.1	Genbank	pseudogene	4879	6434	.	-	.	ID=gene-J4731_13075;Name=lysS;gbkey=Gene;gene=lysS;gene_biotype=pseudogene;locus_tag=J4731_13075;pseudo=true
JAGETS010000024.1	Protein Homology	CDS	4879	6434	.	-	0	ID=cds-J4731_13075;Parent=gene-J4731_13075;Note=frameshifted;gbkey=CDS;gene=lysS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012146591.1;locus_tag=J4731_13075;product=lysine--tRNA ligase;pseudo=true;transl_table=11
JAGETS010000024.1	Genbank	pseudogene	6441	7533	.	-	.	ID=gene-J4731_13080;Name=prfB;gbkey=Gene;gene=prfB;gene_biotype=pseudogene;locus_tag=J4731_13080;pseudo=true
JAGETS010000024.1	Protein Homology	CDS	6441	7533	.	-	0	ID=cds-J4731_13080;Parent=gene-J4731_13080;Note=frameshifted;gbkey=CDS;gene=prfB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311790.1;locus_tag=J4731_13080;product=peptide chain release factor 2;pseudo=true;transl_table=11
JAGETS010000024.1	Genbank	pseudogene	7660	9368	.	-	.	ID=gene-J4731_13085;Name=recJ;gbkey=Gene;gene=recJ;gene_biotype=pseudogene;locus_tag=J4731_13085;pseudo=true
JAGETS010000024.1	Protein Homology	CDS	7660	9368	.	-	0	ID=cds-J4731_13085;Parent=gene-J4731_13085;Note=frameshifted;gbkey=CDS;gene=recJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016943582.1;locus_tag=J4731_13085;product=single-stranded-DNA-specific exonuclease RecJ;pseudo=true;transl_table=11
JAGETS010000024.1	Genbank	pseudogene	9378	10074	.	-	.	ID=gene-J4731_13090;Name=dsbC;gbkey=Gene;gene=dsbC;gene_biotype=pseudogene;locus_tag=J4731_13090;pseudo=true
JAGETS010000024.1	Protein Homology	CDS	9378	10074	.	-	0	ID=cds-J4731_13090;Parent=gene-J4731_13090;Note=frameshifted%3B internal stop;gbkey=CDS;gene=dsbC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006814952.1;locus_tag=J4731_13090;product=bifunctional protein-disulfide isomerase/oxidoreductase DsbC;pseudo=true;transl_table=11
JAGETS010000024.1	Genbank	pseudogene	10088	10987	.	-	.	ID=gene-J4731_13095;Name=xerD;gbkey=Gene;gene=xerD;gene_biotype=pseudogene;locus_tag=J4731_13095;pseudo=true
JAGETS010000024.1	Protein Homology	CDS	10088	10987	.	-	0	ID=cds-J4731_13095;Parent=gene-J4731_13095;Note=frameshifted;gbkey=CDS;gene=xerD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008910400.1;locus_tag=J4731_13095;product=site-specific tyrosine recombinase XerD;pseudo=true;transl_table=11
JAGETS010000024.1	Genbank	pseudogene	11147	11601	.	+	.	ID=gene-J4731_13100;Name=fldB;gbkey=Gene;gene=fldB;gene_biotype=pseudogene;locus_tag=J4731_13100;pseudo=true
JAGETS010000024.1	Protein Homology	CDS	11147	11601	.	+	0	ID=cds-J4731_13100;Parent=gene-J4731_13100;Note=frameshifted%3B internal stop;gbkey=CDS;gene=fldB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011147733.1;locus_tag=J4731_13100;product=flavodoxin FldB;pseudo=true;transl_table=11
JAGETS010000024.1	Genbank	pseudogene	11700	11992	.	-	.	ID=gene-J4731_13105;Name=J4731_13105;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_13105;pseudo=true
JAGETS010000024.1	Protein Homology	CDS	11700	11992	.	-	0	ID=cds-J4731_13105;Parent=gene-J4731_13105;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004921704.1;locus_tag=J4731_13105;product=hypothetical protein;pseudo=true;transl_table=11
JAGETS010000024.1	Genbank	gene	11989	12108	.	-	.	ID=gene-J4731_13110;Name=J4731_13110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_13110
JAGETS010000024.1	Protein Homology	CDS	11989	12108	.	-	0	ID=cds-MBO1929253.1;Parent=gene-J4731_13110;Dbxref=NCBI_GP:MBO1929253.1;Name=MBO1929253.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018908.1;locus_tag=J4731_13110;product=hypothetical protein;protein_id=MBO1929253.1;transl_table=11
JAGETS010000024.1	Genbank	pseudogene	12134	12350	.	-	.	ID=gene-J4731_13115;Name=sdhE;gbkey=Gene;gene=sdhE;gene_biotype=pseudogene;locus_tag=J4731_13115;pseudo=true
JAGETS010000024.1	Protein Homology	CDS	12134	12350	.	-	0	ID=cds-J4731_13115;Parent=gene-J4731_13115;Note=frameshifted;gbkey=CDS;gene=sdhE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019455657.1;locus_tag=J4731_13115;product=FAD assembly factor SdhE;pseudo=true;transl_table=11
JAGETS010000024.1	Genbank	pseudogene	12593	13554	.	+	.	ID=gene-J4731_13120;Name=ygfZ;gbkey=Gene;gene=ygfZ;gene_biotype=pseudogene;locus_tag=J4731_13120;pseudo=true
JAGETS010000024.1	Protein Homology	CDS	12593	13554	.	+	0	ID=cds-J4731_13120;Parent=gene-J4731_13120;Note=frameshifted;gbkey=CDS;gene=ygfZ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006661184.1;locus_tag=J4731_13120;product=tRNA-modifying protein YgfZ;pseudo=true;transl_table=11
JAGETS010000024.1	Genbank	pseudogene	13625	14149	.	+	.	ID=gene-J4731_13125;Name=J4731_13125;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_13125;pseudo=true
JAGETS010000024.1	Protein Homology	CDS	13625	14149	.	+	0	ID=cds-J4731_13125;Parent=gene-J4731_13125;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010845499.1;locus_tag=J4731_13125;product=HD domain-containing protein;pseudo=true;transl_table=11
JAGETS010000024.1	Genbank	pseudogene	14468	15303	.	+	.	ID=gene-J4731_13130;Name=J4731_13130;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_13130;pseudo=true
JAGETS010000024.1	Protein Homology	CDS	14468	15303	.	+	0	ID=cds-J4731_13130;Parent=gene-J4731_13130;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014656367.1;locus_tag=J4731_13130;product=hypothetical protein;pseudo=true;transl_table=11
JAGETS010000024.1	Genbank	pseudogene	15404	18225	.	-	.	ID=gene-J4731_13135;Name=gcvP;gbkey=Gene;gene=gcvP;gene_biotype=pseudogene;locus_tag=J4731_13135;pseudo=true
JAGETS010000024.1	Protein Homology	CDS	15404	18225	.	-	0	ID=cds-J4731_13135;Parent=gene-J4731_13135;Note=frameshifted;gbkey=CDS;gene=gcvP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014656388.1;locus_tag=J4731_13135;product=aminomethyl-transferring glycine dehydrogenase;pseudo=true;transl_table=11
JAGETS010000024.1	Genbank	gene	18522	18914	.	-	.	ID=gene-J4731_13140;Name=gcvH;gbkey=Gene;gene=gcvH;gene_biotype=protein_coding;locus_tag=J4731_13140
JAGETS010000024.1	Protein Homology	CDS	18522	18914	.	-	0	ID=cds-MBO1929254.1;Parent=gene-J4731_13140;Dbxref=NCBI_GP:MBO1929254.1;Name=MBO1929254.1;gbkey=CDS;gene=gcvH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006658043.1;locus_tag=J4731_13140;product=glycine cleavage system protein GcvH;protein_id=MBO1929254.1;transl_table=11
JAGETS010000024.1	Genbank	pseudogene	18960	20039	.	-	.	ID=gene-J4731_13145;Name=gcvT;gbkey=Gene;gene=gcvT;gene_biotype=pseudogene;locus_tag=J4731_13145;pseudo=true
JAGETS010000024.1	Protein Homology	CDS	18960	20039	.	-	0	ID=cds-J4731_13145;Parent=gene-J4731_13145;Note=frameshifted%3B internal stop;gbkey=CDS;gene=gcvT;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004921724.1;locus_tag=J4731_13145;product=glycine cleavage system aminomethyltransferase GcvT;pseudo=true;transl_table=11
JAGETS010000024.1	Genbank	pseudogene	20556	21771	.	-	.	ID=gene-J4731_13150;Name=ubiI;gbkey=Gene;gene=ubiI;gene_biotype=pseudogene;gene_synonym=visC;locus_tag=J4731_13150;pseudo=true
JAGETS010000024.1	Protein Homology	CDS	20556	21771	.	-	0	ID=cds-J4731_13150;Parent=gene-J4731_13150;Note=frameshifted%3B internal stop;gbkey=CDS;gene=ubiI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004261888.1;locus_tag=J4731_13150;product=FAD-dependent 2-octaprenylphenol hydroxylase;pseudo=true;transl_table=11
JAGETS010000024.1	Genbank	pseudogene	21814	22943	.	-	.	ID=gene-J4731_13155;Name=ubiH;gbkey=Gene;gene=ubiH;gene_biotype=pseudogene;gene_synonym=visB;locus_tag=J4731_13155;pseudo=true
JAGETS010000024.1	Protein Homology	CDS	21814	22943	.	-	0	ID=cds-J4731_13155;Parent=gene-J4731_13155;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;gene=ubiH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017893875.1;locus_tag=J4731_13155;product=2-octaprenyl-6-methoxyphenyl hydroxylase;pseudo=true;transl_table=11
JAGETS010000024.1	Genbank	pseudogene	23004	24323	.	-	.	ID=gene-J4731_13160;Name=pepP;gbkey=Gene;gene=pepP;gene_biotype=pseudogene;locus_tag=J4731_13160;pseudo=true
JAGETS010000024.1	Protein Homology	CDS	23004	24323	.	-	0	ID=cds-J4731_13160;Parent=gene-J4731_13160;Note=frameshifted;gbkey=CDS;gene=pepP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006661178.1;locus_tag=J4731_13160;product=Xaa-Pro aminopeptidase;pseudo=true;transl_table=11
JAGETS010000024.1	Genbank	pseudogene	24520	25099	.	-	.	ID=gene-J4731_13165;Name=J4731_13165;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_13165;pseudo=true
JAGETS010000024.1	Protein Homology	CDS	24520	25099	.	-	0	ID=cds-J4731_13165;Parent=gene-J4731_13165;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209953.1;locus_tag=J4731_13165;product=YecA family protein;pseudo=true;transl_table=11
JAGETS010000024.1	Genbank	pseudogene	25239	25567	.	+	.	ID=gene-J4731_13170;Name=zapA;gbkey=Gene;gene=zapA;gene_biotype=pseudogene;locus_tag=J4731_13170;pseudo=true
JAGETS010000024.1	Protein Homology	CDS	25239	25567	.	+	0	ID=cds-J4731_13170;Parent=gene-J4731_13170;Note=frameshifted;gbkey=CDS;gene=zapA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006658037.1;locus_tag=J4731_13170;product=cell division protein ZapA;pseudo=true;transl_table=11
JAGETS010000024.1	Genbank	gene	25679	25860	.	+	.	ID=gene-J4731_13175;Name=ssrS;gbkey=Gene;gene=ssrS;gene_biotype=ncRNA;locus_tag=J4731_13175
JAGETS010000024.1	cmsearch	ncRNA	25679	25860	.	+	.	ID=rna-J4731_13175;Parent=gene-J4731_13175;Dbxref=RFAM:RF00013;gbkey=ncRNA;gene=ssrS;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=J4731_13175;product=6S RNA
JAGETS010000024.1	cmsearch	exon	25679	25860	.	+	.	ID=exon-J4731_13175-1;Parent=rna-J4731_13175;Dbxref=RFAM:RF00013;gbkey=ncRNA;gene=ssrS;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=J4731_13175;product=6S RNA
JAGETS010000024.1	Genbank	pseudogene	25979	26601	.	+	.	ID=gene-J4731_13180;Name=J4731_13180;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_13180;pseudo=true
JAGETS010000024.1	Protein Homology	CDS	25979	26601	.	+	0	ID=cds-J4731_13180;Parent=gene-J4731_13180;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012368219.1;locus_tag=J4731_13180;product=5-formyltetrahydrofolate cyclo-ligase;pseudo=true;transl_table=11
JAGETS010000024.1	Genbank	pseudogene	26608	27850	.	-	.	ID=gene-J4731_13185;Name=serA;gbkey=Gene;gene=serA;gene_biotype=pseudogene;locus_tag=J4731_13185;pseudo=true
JAGETS010000024.1	Protein Homology	CDS	26608	27850	.	-	0	ID=cds-J4731_13185;Parent=gene-J4731_13185;Note=frameshifted;gbkey=CDS;gene=serA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006533704.1;locus_tag=J4731_13185;product=phosphoglycerate dehydrogenase;pseudo=true;transl_table=11
JAGETS010000024.1	Genbank	pseudogene	28289	28928	.	-	.	ID=gene-J4731_13190;Name=rpiA;gbkey=Gene;gene=rpiA;gene_biotype=pseudogene;locus_tag=J4731_13190;pseudo=true
JAGETS010000024.1	Protein Homology	CDS	28289	28928	.	-	0	ID=cds-J4731_13190;Parent=gene-J4731_13190;Note=frameshifted;gbkey=CDS;gene=rpiA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005163342.1;locus_tag=J4731_13190;product=ribose-5-phosphate isomerase RpiA;pseudo=true;transl_table=11
JAGETS010000024.1	Genbank	pseudogene	29143	30085	.	+	.	ID=gene-J4731_13195;Name=J4731_13195;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_13195;pseudo=true
JAGETS010000024.1	Protein Homology	CDS	29143	30085	.	+	0	ID=cds-J4731_13195;Parent=gene-J4731_13195;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006658032.1;locus_tag=J4731_13195;product=LysR family transcriptional regulator ArgP;pseudo=true;transl_table=11
JAGETS010000024.1	Genbank	pseudogene	30045	30773	.	-	.	ID=gene-J4731_13200;Name=J4731_13200;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_13200;pseudo=true
JAGETS010000024.1	Protein Homology	CDS	30045	30773	.	-	0	ID=cds-J4731_13200;Parent=gene-J4731_13200;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013203668.1;locus_tag=J4731_13200;product=oxidative stress defense protein;pseudo=true;transl_table=11
JAGETS010000024.1	Genbank	pseudogene	30935	31555	.	-	.	ID=gene-J4731_13205;Name=argO;gbkey=Gene;gene=argO;gene_biotype=pseudogene;locus_tag=J4731_13205;pseudo=true
JAGETS010000024.1	Protein Homology	CDS	30935	31555	.	-	0	ID=cds-J4731_13205;Parent=gene-J4731_13205;Note=frameshifted;gbkey=CDS;gene=argO;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004261942.1;locus_tag=J4731_13205;product=arginine exporter ArgO;pseudo=true;transl_table=11
JAGETS010000024.1	Genbank	pseudogene	31762	32628	.	-	.	ID=gene-J4731_13210;Name=mscS;gbkey=Gene;gene=mscS;gene_biotype=pseudogene;locus_tag=J4731_13210;pseudo=true
JAGETS010000024.1	Protein Homology	CDS	31762	32628	.	-	0	ID=cds-J4731_13210;Parent=gene-J4731_13210;Note=frameshifted;gbkey=CDS;gene=mscS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006658029.1;locus_tag=J4731_13210;product=small-conductance mechanosensitive channel MscS;pseudo=true;transl_table=11
JAGETS010000024.1	Genbank	pseudogene	32781	33133	.	-	.	ID=gene-J4731_13215;Name=J4731_13215;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_13215;pseudo=true
JAGETS010000024.1	Protein Homology	CDS	32781	33133	.	-	0	ID=cds-J4731_13215;Parent=gene-J4731_13215;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010845528.1;locus_tag=J4731_13215;product=YacL family protein;pseudo=true;transl_table=11
JAGETS010000024.1	Genbank	pseudogene	33323	33699	.	+	.	ID=gene-J4731_13220;Name=J4731_13220;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_13220;pseudo=true
JAGETS010000024.1	Protein Homology	CDS	33323	33699	.	+	0	ID=cds-J4731_13220;Parent=gene-J4731_13220;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004921781.1;locus_tag=J4731_13220;product=VOC family protein;pseudo=true;transl_table=11
JAGETS010000024.1	Genbank	pseudogene	33760	36334	.	-	.	ID=gene-J4731_13225;Name=acnB;gbkey=Gene;gene=acnB;gene_biotype=pseudogene;locus_tag=J4731_13225;pseudo=true
JAGETS010000024.1	Protein Homology	CDS	33760	36334	.	-	0	ID=cds-J4731_13225;Parent=gene-J4731_13225;Note=frameshifted%3B internal stop;gbkey=CDS;gene=acnB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019080489.1;locus_tag=J4731_13225;product=bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase;pseudo=true;transl_table=11
JAGETS010000024.1	Genbank	pseudogene	36774	37119	.	-	.	ID=gene-J4731_13230;Name=J4731_13230;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_13230;pseudo=true
JAGETS010000024.1	Protein Homology	CDS	36774	37119	.	-	0	ID=cds-J4731_13230;Parent=gene-J4731_13230;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004921822.1;locus_tag=J4731_13230;product=VOC family protein;pseudo=true;transl_table=11
JAGETS010000024.1	Genbank	pseudogene	37248	37531	.	-	.	ID=gene-J4731_13235;Name=J4731_13235;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_13235;pseudo=true
JAGETS010000024.1	Protein Homology	CDS	37248	37531	.	-	0	ID=cds-J4731_13235;Parent=gene-J4731_13235;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016495784.1;locus_tag=J4731_13235;product=hypothetical protein;pseudo=true;transl_table=11
JAGETS010000024.1	Genbank	gene	37693	38040	.	-	.	ID=gene-J4731_13240;Name=J4731_13240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_13240
JAGETS010000024.1	Protein Homology	CDS	37693	38040	.	-	0	ID=cds-MBO1929255.1;Parent=gene-J4731_13240;Dbxref=NCBI_GP:MBO1929255.1;Name=MBO1929255.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024508.1;locus_tag=J4731_13240;product=DUF3969 family protein;protein_id=MBO1929255.1;transl_table=11
JAGETS010000024.1	Genbank	gene	38384	38566	.	-	.	ID=gene-J4731_13245;Name=J4731_13245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_13245
JAGETS010000024.1	GeneMarkS-2+	CDS	38384	38566	.	-	0	ID=cds-MBO1929256.1;Parent=gene-J4731_13245;Dbxref=NCBI_GP:MBO1929256.1;Name=MBO1929256.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_13245;product=hypothetical protein;protein_id=MBO1929256.1;transl_table=11
JAGETS010000024.1	Genbank	pseudogene	39420	39796	.	-	.	ID=gene-J4731_13250;Name=J4731_13250;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_13250;pseudo=true
JAGETS010000024.1	Protein Homology	CDS	39420	39796	.	-	0	ID=cds-J4731_13250;Parent=gene-J4731_13250;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006658025.1;locus_tag=J4731_13250;product=hypothetical protein;pseudo=true;transl_table=11
JAGETS010000024.1	Genbank	pseudogene	39987	40339	.	-	.	ID=gene-J4731_13255;Name=J4731_13255;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_13255;pseudo=true
JAGETS010000024.1	Protein Homology	CDS	39987	40339	.	-	0	ID=cds-J4731_13255;Parent=gene-J4731_13255;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000954752.1;locus_tag=J4731_13255;product=DUF596 domain-containing protein;pseudo=true;transl_table=11
JAGETS010000024.1	Genbank	gene	40348	40602	.	-	.	ID=gene-J4731_13260;Name=J4731_13260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_13260
JAGETS010000024.1	Protein Homology	CDS	40348	40602	.	-	0	ID=cds-MBO1929257.1;Parent=gene-J4731_13260;Dbxref=NCBI_GP:MBO1929257.1;Name=MBO1929257.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000254444.1;locus_tag=J4731_13260;product=hemagglutinin;protein_id=MBO1929257.1;transl_table=11
JAGETS010000024.1	Genbank	gene	40931	41158	.	-	.	ID=gene-J4731_13265;Name=J4731_13265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_13265
JAGETS010000024.1	GeneMarkS-2+	CDS	40931	41158	.	-	0	ID=cds-MBO1929258.1;Parent=gene-J4731_13265;Dbxref=NCBI_GP:MBO1929258.1;Name=MBO1929258.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_13265;product=hypothetical protein;protein_id=MBO1929258.1;transl_table=11
JAGETS010000024.1	Genbank	pseudogene	42194	42425	.	-	.	ID=gene-J4731_13270;Name=J4731_13270;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_13270;pseudo=true
JAGETS010000024.1	Protein Homology	CDS	42194	42425	.	-	0	ID=cds-J4731_13270;Parent=gene-J4731_13270;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004265618.1;locus_tag=J4731_13270;product=hypothetical protein;pseudo=true;transl_table=11
JAGETS010000024.1	Genbank	gene	43530	44060	.	-	.	ID=gene-J4731_13275;Name=J4731_13275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_13275
JAGETS010000024.1	GeneMarkS-2+	CDS	43530	44060	.	-	0	ID=cds-MBO1929259.1;Parent=gene-J4731_13275;Dbxref=NCBI_GP:MBO1929259.1;Name=MBO1929259.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_13275;product=hypothetical protein;protein_id=MBO1929259.1;transl_table=11
JAGETS010000024.1	Genbank	gene	44992	45234	.	-	.	ID=gene-J4731_13280;Name=J4731_13280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_13280
JAGETS010000024.1	GeneMarkS-2+	CDS	44992	45234	.	-	0	ID=cds-MBO1929260.1;Parent=gene-J4731_13280;Dbxref=NCBI_GP:MBO1929260.1;Name=MBO1929260.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_13280;product=hypothetical protein;protein_id=MBO1929260.1;transl_table=11
JAGETS010000024.1	Genbank	pseudogene	46844	48265	.	-	.	ID=gene-J4731_13285;Name=lpdA;gbkey=Gene;gene=lpdA;gene_biotype=pseudogene;locus_tag=J4731_13285;pseudo=true
JAGETS010000024.1	Protein Homology	CDS	46844	48265	.	-	0	ID=cds-J4731_13285;Parent=gene-J4731_13285;Note=frameshifted;gbkey=CDS;gene=lpdA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001738005.1;locus_tag=J4731_13285;product=dihydrolipoyl dehydrogenase;pseudo=true;transl_table=11
JAGETS010000024.1	Genbank	pseudogene	48467	50020	.	-	.	ID=gene-J4731_13290;Name=aceF;gbkey=Gene;gene=aceF;gene_biotype=pseudogene;locus_tag=J4731_13290;pseudo=true
JAGETS010000024.1	Protein Homology	CDS	48467	50020	.	-	0	ID=cds-J4731_13290;Parent=gene-J4731_13290;Note=frameshifted%3B internal stop;gbkey=CDS;gene=aceF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014542141.1;locus_tag=J4731_13290;product=pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase;pseudo=true;transl_table=11
JAGETS010000024.1	Genbank	pseudogene	50051	50248	.	-	.	ID=gene-J4731_13295;Name=aceF;gbkey=Gene;gene=aceF;gene_biotype=pseudogene;locus_tag=J4731_13295;pseudo=true
JAGETS010000024.1	Protein Homology	CDS	50051	50248	.	-	0	ID=cds-J4731_13295;Parent=gene-J4731_13295;Note=E2 component of pyruvate dehydrogenase multienzyme complex%3B in Escherichia coli AceF contains three N-terminal lipoyl domains%3B frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;gene=aceF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009111469.1;locus_tag=J4731_13295;product=pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase;pseudo=true;transl_table=11
JAGETS010000024.1	Genbank	pseudogene	50378	52980	.	-	.	ID=gene-J4731_13300;Name=aceE;gbkey=Gene;gene=aceE;gene_biotype=pseudogene;locus_tag=J4731_13300;pseudo=true
JAGETS010000024.1	Protein Homology	CDS	50378	52980	.	-	0	ID=cds-J4731_13300;Parent=gene-J4731_13300;Note=frameshifted;gbkey=CDS;gene=aceE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013087793.1;locus_tag=J4731_13300;product=pyruvate dehydrogenase (acetyl-transferring)%2C homodimeric type;pseudo=true;transl_table=11
JAGETS010000024.1	Genbank	pseudogene	53146	53912	.	-	.	ID=gene-J4731_13305;Name=pdhR;gbkey=Gene;gene=pdhR;gene_biotype=pseudogene;locus_tag=J4731_13305;pseudo=true
JAGETS010000024.1	Protein Homology	CDS	53146	53912	.	-	0	ID=cds-J4731_13305;Parent=gene-J4731_13305;Note=frameshifted;gbkey=CDS;gene=pdhR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006814983.1;locus_tag=J4731_13305;product=pyruvate dehydrogenase complex transcriptional repressor PdhR;pseudo=true;transl_table=11
JAGETS010000024.1	Genbank	pseudogene	54650	55547	.	-	.	ID=gene-J4731_13310;Name=nadC;gbkey=Gene;gene=nadC;gene_biotype=pseudogene;locus_tag=J4731_13310;pseudo=true
JAGETS010000024.1	Protein Homology	CDS	54650	55547	.	-	0	ID=cds-J4731_13310;Parent=gene-J4731_13310;Note=frameshifted;gbkey=CDS;gene=nadC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004261992.1;locus_tag=J4731_13310;product=carboxylating nicotinate-nucleotide diphosphorylase;pseudo=true;transl_table=11
JAGETS010000024.1	Genbank	pseudogene	55640	56195	.	+	.	ID=gene-J4731_13315;Name=ampD;gbkey=Gene;gene=ampD;gene_biotype=pseudogene;locus_tag=J4731_13315;pseudo=true
JAGETS010000024.1	Protein Homology	CDS	55640	56195	.	+	0	ID=cds-J4731_13315;Parent=gene-J4731_13315;Note=frameshifted;gbkey=CDS;gene=ampD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004261995.1;locus_tag=J4731_13315;product=1%2C6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD;pseudo=true;transl_table=11
JAGETS010000024.1	Genbank	pseudogene	56456	56880	.	+	.	ID=gene-J4731_13320;Name=ppdD;gbkey=Gene;gene=ppdD;gene_biotype=pseudogene;locus_tag=J4731_13320;pseudo=true
JAGETS010000024.1	Protein Homology	CDS	56456	56880	.	+	0	ID=cds-J4731_13320;Parent=gene-J4731_13320;Note=frameshifted;gbkey=CDS;gene=ppdD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004921858.1;locus_tag=J4731_13320;product=prepilin peptidase-dependent pilin;pseudo=true;transl_table=11
JAGETS010000024.1	Genbank	pseudogene	56895	58282	.	+	.	ID=gene-J4731_13325;Name=tadA;gbkey=Gene;gene=tadA;gene_biotype=pseudogene;locus_tag=J4731_13325;pseudo=true
JAGETS010000024.1	Protein Homology	CDS	56895	58282	.	+	0	ID=cds-J4731_13325;Parent=gene-J4731_13325;Note=frameshifted;gbkey=CDS;gene=tadA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004262001.1;locus_tag=J4731_13325;product=Flp pilus assembly complex ATPase component TadA;pseudo=true;transl_table=11
JAGETS010000024.1	Genbank	pseudogene	58284	59456	.	+	.	ID=gene-J4731_13330;Name=J4731_13330;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_13330;pseudo=true
JAGETS010000024.1	Protein Homology	CDS	58284	59456	.	+	0	ID=cds-J4731_13330;Parent=gene-J4731_13330;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004262003.1;locus_tag=J4731_13330;product=type II secretion system F family protein;pseudo=true;transl_table=11
JAGETS010000024.1	Genbank	pseudogene	59604	60210	.	+	.	ID=gene-J4731_13335;Name=coaE;gbkey=Gene;gene=coaE;gene_biotype=pseudogene;locus_tag=J4731_13335;pseudo=true
JAGETS010000024.1	Protein Homology	CDS	59604	60210	.	+	0	ID=cds-J4731_13335;Parent=gene-J4731_13335;Note=frameshifted;gbkey=CDS;gene=coaE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012989802.1;locus_tag=J4731_13335;product=dephospho-CoA kinase;pseudo=true;transl_table=11
JAGETS010000024.1	Genbank	pseudogene	60212	60967	.	+	.	ID=gene-J4731_13340;Name=zapD;gbkey=Gene;gene=zapD;gene_biotype=pseudogene;locus_tag=J4731_13340;pseudo=true
JAGETS010000024.1	Protein Homology	CDS	60212	60967	.	+	0	ID=cds-J4731_13340;Parent=gene-J4731_13340;Note=frameshifted;gbkey=CDS;gene=zapD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006814991.1;locus_tag=J4731_13340;product=cell division protein ZapD;pseudo=true;transl_table=11
JAGETS010000024.1	Genbank	pseudogene	60984	61178	.	+	.	ID=gene-J4731_13345;Name=yacG;gbkey=Gene;gene=yacG;gene_biotype=pseudogene;locus_tag=J4731_13345;pseudo=true
JAGETS010000024.1	Protein Homology	CDS	60984	61178	.	+	0	ID=cds-J4731_13345;Parent=gene-J4731_13345;Note=frameshifted;gbkey=CDS;gene=yacG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007790728.1;locus_tag=J4731_13345;product=DNA gyrase inhibitor YacG;pseudo=true;transl_table=11
JAGETS010000024.1	Genbank	pseudogene	61248	61644	.	-	.	ID=gene-J4731_13350;Name=mutT;gbkey=Gene;gene=mutT;gene_biotype=pseudogene;locus_tag=J4731_13350;pseudo=true
JAGETS010000024.1	Protein Homology	CDS	61248	61644	.	-	0	ID=cds-J4731_13350;Parent=gene-J4731_13350;Note=frameshifted;gbkey=CDS;gene=mutT;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015690466.1;locus_tag=J4731_13350;product=8-oxo-dGTP diphosphatase MutT;pseudo=true;transl_table=11
JAGETS010000024.1	Genbank	pseudogene	61715	64410	.	-	.	ID=gene-J4731_13355;Name=secA;gbkey=Gene;gene=secA;gene_biotype=pseudogene;locus_tag=J4731_13355;pseudo=true
JAGETS010000024.1	Protein Homology	CDS	61715	64410	.	-	0	ID=cds-J4731_13355;Parent=gene-J4731_13355;Note=frameshifted%3B internal stop;gbkey=CDS;gene=secA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015704405.1;locus_tag=J4731_13355;product=preprotein translocase subunit SecA;pseudo=true;transl_table=11
JAGETS010000024.1	Genbank	pseudogene	64507	65034	.	-	.	ID=gene-J4731_13360;Name=secM;gbkey=Gene;gene=secM;gene_biotype=pseudogene;locus_tag=J4731_13360;pseudo=true
JAGETS010000024.1	Protein Homology	CDS	64507	65034	.	-	0	ID=cds-J4731_13360;Parent=gene-J4731_13360;Note=frameshifted;gbkey=CDS;gene=secM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006814996.1;locus_tag=J4731_13360;product=secA regulator SecM;pseudo=true;transl_table=11
JAGETS010000024.1	Genbank	pseudogene	65110	65625	.	+	.	ID=gene-J4731_13365;Name=J4731_13365;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_13365;pseudo=true
JAGETS010000024.1	Protein Homology	CDS	65110	65625	.	+	0	ID=cds-J4731_13365;Parent=gene-J4731_13365;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006660765.1;locus_tag=J4731_13365;product=DUF721 domain-containing protein;pseudo=true;transl_table=11
JAGETS010000024.1	Genbank	pseudogene	65664	66571	.	-	.	ID=gene-J4731_13370;Name=lpxC;gbkey=Gene;gene=lpxC;gene_biotype=pseudogene;locus_tag=J4731_13370;pseudo=true
JAGETS010000024.1	Protein Homology	CDS	65664	66571	.	-	0	ID=cds-J4731_13370;Parent=gene-J4731_13370;Note=frameshifted;gbkey=CDS;gene=lpxC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459139.1;locus_tag=J4731_13370;product=UDP-3-O-acyl-N-acetylglucosamine deacetylase;pseudo=true;transl_table=11
JAGETS010000024.1	Genbank	pseudogene	66671	67824	.	-	.	ID=gene-J4731_13375;Name=ftsZ;gbkey=Gene;gene=ftsZ;gene_biotype=pseudogene;locus_tag=J4731_13375;pseudo=true
JAGETS010000024.1	Protein Homology	CDS	66671	67824	.	-	0	ID=cds-J4731_13375;Parent=gene-J4731_13375;Note=frameshifted;gbkey=CDS;gene=ftsZ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015965916.1;locus_tag=J4731_13375;product=cell division protein FtsZ;pseudo=true;transl_table=11
JAGETS010000024.1	Genbank	pseudogene	67885	69125	.	-	.	ID=gene-J4731_13380;Name=ftsA;gbkey=Gene;gene=ftsA;gene_biotype=pseudogene;locus_tag=J4731_13380;pseudo=true
JAGETS010000024.1	Protein Homology	CDS	67885	69125	.	-	0	ID=cds-J4731_13380;Parent=gene-J4731_13380;Note=frameshifted;gbkey=CDS;gene=ftsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459137.1;locus_tag=J4731_13380;product=cell division protein FtsA;pseudo=true;transl_table=11
JAGETS010000024.1	Genbank	pseudogene	69160	69965	.	-	.	ID=gene-J4731_13385;Name=ftsQ;gbkey=Gene;gene=ftsQ;gene_biotype=pseudogene;locus_tag=J4731_13385;pseudo=true
JAGETS010000024.1	Protein Homology	CDS	69160	69965	.	-	0	ID=cds-J4731_13385;Parent=gene-J4731_13385;Note=frameshifted;gbkey=CDS;gene=ftsQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006660761.1;locus_tag=J4731_13385;product=cell division protein FtsQ;pseudo=true;transl_table=11
JAGETS010000024.1	Genbank	pseudogene	69967	70882	.	-	.	ID=gene-J4731_13390;Name=J4731_13390;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_13390;pseudo=true
JAGETS010000024.1	Protein Homology	CDS	69967	70882	.	-	0	ID=cds-J4731_13390;Parent=gene-J4731_13390;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004262027.1;locus_tag=J4731_13390;product=D-alanine--D-alanine ligase;pseudo=true;transl_table=11
JAGETS010000024.1	Genbank	pseudogene	70936	72327	.	-	.	ID=gene-J4731_13395;Name=murC;gbkey=Gene;gene=murC;gene_biotype=pseudogene;locus_tag=J4731_13395;pseudo=true
JAGETS010000024.1	Protein Homology	CDS	70936	72327	.	-	0	ID=cds-J4731_13395;Parent=gene-J4731_13395;Note=frameshifted;gbkey=CDS;gene=murC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308122.1;locus_tag=J4731_13395;product=UDP-N-acetylmuramate--L-alanine ligase;pseudo=true;transl_table=11
JAGETS010000024.1	Genbank	pseudogene	72374	73432	.	-	.	ID=gene-J4731_13400;Name=murG;gbkey=Gene;gene=murG;gene_biotype=pseudogene;locus_tag=J4731_13400;pseudo=true
JAGETS010000024.1	Protein Homology	CDS	72374	73432	.	-	0	ID=cds-J4731_13400;Parent=gene-J4731_13400;Note=frameshifted;gbkey=CDS;gene=murG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004244116.1;locus_tag=J4731_13400;product=undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase;pseudo=true;transl_table=11
JAGETS010000024.1	Genbank	pseudogene	73444	74611	.	-	.	ID=gene-J4731_13405;Name=ftsW;gbkey=Gene;gene=ftsW;gene_biotype=pseudogene;locus_tag=J4731_13405;pseudo=true
JAGETS010000024.1	Protein Homology	CDS	73444	74611	.	-	0	ID=cds-J4731_13405;Parent=gene-J4731_13405;Note=frameshifted;gbkey=CDS;gene=ftsW;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006660757.1;locus_tag=J4731_13405;product=cell division protein FtsW;pseudo=true;transl_table=11
JAGETS010000024.1	Genbank	pseudogene	74616	75906	.	-	.	ID=gene-J4731_13410;Name=murD;gbkey=Gene;gene=murD;gene_biotype=pseudogene;locus_tag=J4731_13410;pseudo=true
JAGETS010000024.1	Protein Homology	CDS	74616	75906	.	-	0	ID=cds-J4731_13410;Parent=gene-J4731_13410;Note=frameshifted%3B internal stop;gbkey=CDS;gene=murD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225108.1;locus_tag=J4731_13410;product=UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase;pseudo=true;transl_table=11
JAGETS010000024.1	Genbank	pseudogene	75912	76987	.	-	.	ID=gene-J4731_13415;Name=mraY;gbkey=Gene;gene=mraY;gene_biotype=pseudogene;locus_tag=J4731_13415;pseudo=true
JAGETS010000024.1	Protein Homology	CDS	75912	76987	.	-	0	ID=cds-J4731_13415;Parent=gene-J4731_13415;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;gene=mraY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124610.1;locus_tag=J4731_13415;product=phospho-N-acetylmuramoyl-pentapeptide-transferase;pseudo=true;transl_table=11
JAGETS010000024.1	Genbank	pseudogene	76981	78342	.	-	.	ID=gene-J4731_13420;Name=murF;gbkey=Gene;gene=murF;gene_biotype=pseudogene;locus_tag=J4731_13420;pseudo=true
JAGETS010000024.1	Protein Homology	CDS	76981	78342	.	-	0	ID=cds-J4731_13420;Parent=gene-J4731_13420;Note=frameshifted;gbkey=CDS;gene=murF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014656418.1;locus_tag=J4731_13420;product=UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase;pseudo=true;transl_table=11
JAGETS010000024.1	Genbank	pseudogene	78339	79743	.	-	.	ID=gene-J4731_13425;Name=murE;gbkey=Gene;gene=murE;gene_biotype=pseudogene;locus_tag=J4731_13425;pseudo=true
JAGETS010000024.1	Protein Homology	CDS	78339	79743	.	-	0	ID=cds-J4731_13425;Parent=gene-J4731_13425;Note=frameshifted;gbkey=CDS;gene=murE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004262039.1;locus_tag=J4731_13425;product=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2%2C6-diaminopimelate ligase;pseudo=true;transl_table=11
JAGETS010000024.1	Genbank	pseudogene	79816	81541	.	-	.	ID=gene-J4731_13430;Name=ftsI;gbkey=Gene;gene=ftsI;gene_biotype=pseudogene;locus_tag=J4731_13430;pseudo=true
JAGETS010000024.1	Protein Homology	CDS	79816	81541	.	-	0	ID=cds-J4731_13430;Parent=gene-J4731_13430;Note=frameshifted;gbkey=CDS;gene=ftsI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010298031.1;locus_tag=J4731_13430;product=peptidoglycan glycosyltransferase FtsI;pseudo=true;transl_table=11
JAGETS010000024.1	Genbank	pseudogene	81552	81870	.	-	.	ID=gene-J4731_13435;Name=ftsL;gbkey=Gene;gene=ftsL;gene_biotype=pseudogene;locus_tag=J4731_13435;pseudo=true
JAGETS010000024.1	Protein Homology	CDS	81552	81870	.	-	0	ID=cds-J4731_13435;Parent=gene-J4731_13435;Note=frameshifted;gbkey=CDS;gene=ftsL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008910345.1;locus_tag=J4731_13435;product=cell division protein FtsL;pseudo=true;transl_table=11
JAGETS010000024.1	Genbank	pseudogene	81870	82822	.	-	.	ID=gene-J4731_13440;Name=rsmH;gbkey=Gene;gene=rsmH;gene_biotype=pseudogene;locus_tag=J4731_13440;pseudo=true
JAGETS010000024.1	Protein Homology	CDS	81870	82822	.	-	0	ID=cds-J4731_13440;Parent=gene-J4731_13440;Note=frameshifted;gbkey=CDS;gene=rsmH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006660750.1;locus_tag=J4731_13440;product=16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH;pseudo=true;transl_table=11
JAGETS010000024.1	Genbank	pseudogene	82825	83281	.	-	.	ID=gene-J4731_13445;Name=mraZ;gbkey=Gene;gene=mraZ;gene_biotype=pseudogene;locus_tag=J4731_13445;pseudo=true
JAGETS010000024.1	Protein Homology	CDS	82825	83281	.	-	0	ID=cds-J4731_13445;Parent=gene-J4731_13445;Note=frameshifted;gbkey=CDS;gene=mraZ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005167064.1;locus_tag=J4731_13445;product=division/cell wall cluster transcriptional repressor MraZ;pseudo=true;transl_table=11
JAGETS010000024.1	Genbank	pseudogene	83988	84991	.	-	.	ID=gene-J4731_13450;Name=cra;gbkey=Gene;gene=cra;gene_biotype=pseudogene;locus_tag=J4731_13450;pseudo=true
JAGETS010000024.1	Protein Homology	CDS	83988	84991	.	-	0	ID=cds-J4731_13450;Parent=gene-J4731_13450;Note=frameshifted;gbkey=CDS;gene=cra;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006661152.1;locus_tag=J4731_13450;product=catabolite repressor/activator;pseudo=true;transl_table=11
JAGETS010000024.1	Genbank	pseudogene	85076	85562	.	-	.	ID=gene-J4731_13455;Name=ilvN;gbkey=Gene;gene=ilvN;gene_biotype=pseudogene;locus_tag=J4731_13455;pseudo=true
JAGETS010000024.1	Protein Homology	CDS	85076	85562	.	-	0	ID=cds-J4731_13455;Parent=gene-J4731_13455;Note=frameshifted;gbkey=CDS;gene=ilvN;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001563086.1;locus_tag=J4731_13455;product=acetolactate synthase small subunit;pseudo=true;transl_table=11
JAGETS010000024.1	Genbank	pseudogene	85565	87272	.	-	.	ID=gene-J4731_13460;Name=ilvB;gbkey=Gene;gene=ilvB;gene_biotype=pseudogene;locus_tag=J4731_13460;pseudo=true
JAGETS010000024.1	Protein Homology	CDS	85565	87272	.	-	0	ID=cds-J4731_13460;Parent=gene-J4731_13460;Note=frameshifted%3B internal stop;gbkey=CDS;gene=ilvB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308108.2;locus_tag=J4731_13460;product=biosynthetic-type acetolactate synthase large subunit;pseudo=true;transl_table=11
JAGETS010000024.1	Genbank	pseudogene	87641	89436	.	-	.	ID=gene-J4731_13465;Name=J4731_13465;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_13465;pseudo=true
JAGETS010000024.1	Protein Homology	CDS	87641	89436	.	-	0	ID=cds-J4731_13465;Parent=gene-J4731_13465;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005167053.1;locus_tag=J4731_13465;product=long-chain fatty acid--CoA ligase;pseudo=true;transl_table=11
JAGETS010000024.1	Genbank	pseudogene	89812	90774	.	-	.	ID=gene-J4731_13470;Name=leuO;gbkey=Gene;gene=leuO;gene_biotype=pseudogene;locus_tag=J4731_13470;pseudo=true
JAGETS010000024.1	Protein Homology	CDS	89812	90774	.	-	0	ID=cds-J4731_13470;Parent=gene-J4731_13470;Note=frameshifted;gbkey=CDS;gene=leuO;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004262052.1;locus_tag=J4731_13470;product=transcriptional regulator LeuO;pseudo=true;transl_table=11
JAGETS010000024.1	Genbank	gene	91469	91546	.	+	.	ID=gene-J4731_13475;Name=leuL;gbkey=Gene;gene=leuL;gene_biotype=protein_coding;locus_tag=J4731_13475
JAGETS010000024.1	Protein Homology	CDS	91469	91546	.	+	0	ID=cds-MBO1929261.1;Parent=gene-J4731_13475;Dbxref=NCBI_GP:MBO1929261.1;Name=MBO1929261.1;gbkey=CDS;gene=leuL;inference=COORDINATES: protein motif:HMM:NF019666.1;locus_tag=J4731_13475;product=leu operon leader peptide;protein_id=MBO1929261.1;transl_table=11
JAGETS010000024.1	Genbank	pseudogene	91660	93193	.	+	.	ID=gene-J4731_13480;Name=leuA;gbkey=Gene;gene=leuA;gene_biotype=pseudogene;locus_tag=J4731_13480;pseudo=true
JAGETS010000024.1	Protein Homology	CDS	91660	93193	.	+	0	ID=cds-J4731_13480;Parent=gene-J4731_13480;Note=frameshifted;gbkey=CDS;gene=leuA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005156896.1;locus_tag=J4731_13480;product=2-isopropylmalate synthase;pseudo=true;transl_table=11
JAGETS010000024.1	Genbank	pseudogene	93234	94304	.	+	.	ID=gene-J4731_13485;Name=leuB;gbkey=Gene;gene=leuB;gene_biotype=pseudogene;locus_tag=J4731_13485;pseudo=true
JAGETS010000024.1	Protein Homology	CDS	93234	94304	.	+	0	ID=cds-J4731_13485;Parent=gene-J4731_13485;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;gene=leuB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004262056.1;locus_tag=J4731_13485;product=3-isopropylmalate dehydrogenase;pseudo=true;transl_table=11
JAGETS010000024.1	Genbank	pseudogene	94311	95710	.	+	.	ID=gene-J4731_13490;Name=leuC;gbkey=Gene;gene=leuC;gene_biotype=pseudogene;locus_tag=J4731_13490;pseudo=true
JAGETS010000024.1	Protein Homology	CDS	94311	95710	.	+	0	ID=cds-J4731_13490;Parent=gene-J4731_13490;Note=frameshifted;gbkey=CDS;gene=leuC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004262057.1;locus_tag=J4731_13490;product=3-isopropylmalate dehydratase large subunit;pseudo=true;transl_table=11
JAGETS010000024.1	Genbank	pseudogene	95732	96319	.	+	.	ID=gene-J4731_13495;Name=leuD;gbkey=Gene;gene=leuD;gene_biotype=pseudogene;locus_tag=J4731_13495;pseudo=true
JAGETS010000024.1	Protein Homology	CDS	95732	96319	.	+	0	ID=cds-J4731_13495;Parent=gene-J4731_13495;Note=frameshifted;gbkey=CDS;gene=leuD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008910334.1;locus_tag=J4731_13495;product=3-isopropylmalate dehydratase small subunit;pseudo=true;transl_table=11
JAGETS010000024.1	Genbank	pseudogene	96786	98453	.	+	.	ID=gene-J4731_13500;Name=sgrR;gbkey=Gene;gene=sgrR;gene_biotype=pseudogene;locus_tag=J4731_13500;pseudo=true
JAGETS010000024.1	Protein Homology	CDS	96786	98453	.	+	0	ID=cds-J4731_13500;Parent=gene-J4731_13500;Note=frameshifted;gbkey=CDS;gene=sgrR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004262062.1;locus_tag=J4731_13500;product=HTH-type transcriptional regulator SgrR;pseudo=true;transl_table=11
JAGETS010000024.1	Genbank	pseudogene	99017	99699	.	+	.	ID=gene-J4731_13505;Name=mutH;gbkey=Gene;gene=mutH;gene_biotype=pseudogene;locus_tag=J4731_13505;pseudo=true
JAGETS010000024.1	Protein Homology	CDS	99017	99699	.	+	0	ID=cds-J4731_13505;Parent=gene-J4731_13505;Note=frameshifted;gbkey=CDS;gene=mutH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006815026.1;locus_tag=J4731_13505;product=DNA mismatch repair endonuclease MutH;pseudo=true;transl_table=11
JAGETS010000024.1	Genbank	pseudogene	99776	100514	.	+	.	ID=gene-J4731_13510;Name=J4731_13510;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_13510;pseudo=true
JAGETS010000024.1	Protein Homology	CDS	99776	100514	.	+	0	ID=cds-J4731_13510;Parent=gene-J4731_13510;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019078932.1;locus_tag=J4731_13510;product=TerC family protein;pseudo=true;transl_table=11
JAGETS010000024.1	Genbank	pseudogene	100498	100745	.	-	.	ID=gene-J4731_13515;Name=J4731_13515;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_13515;pseudo=true
JAGETS010000024.1	Protein Homology	CDS	100498	100745	.	-	0	ID=cds-J4731_13515;Parent=gene-J4731_13515;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004262067.1;locus_tag=J4731_13515;product=helix-hairpin-helix domain-containing protein;pseudo=true;transl_table=11
JAGETS010000024.1	Genbank	pseudogene	100948	101818	.	+	.	ID=gene-J4731_13520;Name=J4731_13520;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_13520;pseudo=true
JAGETS010000024.1	Protein Homology	CDS	100948	101818	.	+	0	ID=cds-J4731_13520;Parent=gene-J4731_13520;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006815029.1;locus_tag=J4731_13520;product=alpha/beta hydrolase;pseudo=true;transl_table=11
JAGETS010000024.1	Genbank	gene	101836	101968	.	-	.	ID=gene-J4731_13525;Name=J4731_13525;end_range=101968,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_13525;partial=true
JAGETS010000024.1	Protein Homology	CDS	101836	101968	.	-	1	ID=cds-MBO1929262.1;Parent=gene-J4731_13525;Dbxref=NCBI_GP:MBO1929262.1;Name=MBO1929262.1;end_range=101968,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004262072.1;locus_tag=J4731_13525;partial=true;product=SDR family oxidoreductase;protein_id=MBO1929262.1;transl_table=11
##sequence-region JAGETS010000025.1 1 117946
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=587
JAGETS010000025.1	Genbank	region	1	117946	.	+	.	ID=JAGETS010000025.1:1..117946;Dbxref=taxon:587;collected-by=NHLS;collection-date=2018;country=South Africa: Pretoria;gbkey=Src;isolation-source=stool;lat-lon=25.7479 S 28.2293 E;mol_type=genomic DNA;nat-host=porcine;strain=SG003
JAGETS010000025.1	Genbank	pseudogene	1	665	.	-	.	ID=gene-J4731_13530;Name=J4731_13530;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_13530;pseudo=true
JAGETS010000025.1	Protein Homology	CDS	1	665	.	-	0	ID=cds-J4731_13530;Parent=gene-J4731_13530;Note=frameshifted%3B internal stop%3B incomplete%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003114727.1;locus_tag=J4731_13530;product=efflux RND transporter permease subunit;pseudo=true;transl_table=11
JAGETS010000025.1	Genbank	pseudogene	675	1761	.	-	.	ID=gene-J4731_13535;Name=J4731_13535;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_13535;pseudo=true
JAGETS010000025.1	Protein Homology	CDS	675	1761	.	-	0	ID=cds-J4731_13535;Parent=gene-J4731_13535;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003104731.1;locus_tag=J4731_13535;product=efflux RND transporter periplasmic adaptor subunit;pseudo=true;transl_table=11
JAGETS010000025.1	Genbank	pseudogene	1778	2198	.	-	.	ID=gene-J4731_13540;Name=J4731_13540;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_13540;pseudo=true
JAGETS010000025.1	Protein Homology	CDS	1778	2198	.	-	0	ID=cds-J4731_13540;Parent=gene-J4731_13540;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004926011.1;locus_tag=J4731_13540;product=DoxX family protein;pseudo=true;transl_table=11
JAGETS010000025.1	Genbank	pseudogene	2335	2777	.	+	.	ID=gene-J4731_13545;Name=soxR;gbkey=Gene;gene=soxR;gene_biotype=pseudogene;locus_tag=J4731_13545;pseudo=true
JAGETS010000025.1	Protein Homology	CDS	2335	2777	.	+	0	ID=cds-J4731_13545;Parent=gene-J4731_13545;Note=frameshifted%3B internal stop;gbkey=CDS;gene=soxR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016155363.1;locus_tag=J4731_13545;product=redox-sensitive transcriptional activator SoxR;pseudo=true;transl_table=11
JAGETS010000025.1	Genbank	pseudogene	3006	3786	.	+	.	ID=gene-J4731_13550;Name=J4731_13550;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_13550;pseudo=true
JAGETS010000025.1	Protein Homology	CDS	3006	3786	.	+	0	ID=cds-J4731_13550;Parent=gene-J4731_13550;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004261123.1;locus_tag=J4731_13550;product=SDR family oxidoreductase;pseudo=true;transl_table=11
JAGETS010000025.1	Genbank	pseudogene	3822	5061	.	+	.	ID=gene-J4731_13555;Name=J4731_13555;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_13555;pseudo=true
JAGETS010000025.1	Protein Homology	CDS	3822	5061	.	+	0	ID=cds-J4731_13555;Parent=gene-J4731_13555;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006816020.1;locus_tag=J4731_13555;product=NAD(P)-binding domain-containing protein;pseudo=true;transl_table=11
JAGETS010000025.1	Genbank	gene	5082	5612	.	+	.	ID=gene-J4731_13560;Name=J4731_13560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_13560
JAGETS010000025.1	Protein Homology	CDS	5082	5612	.	+	0	ID=cds-MBO1929263.1;Parent=gene-J4731_13560;Dbxref=NCBI_GP:MBO1929263.1;Name=MBO1929263.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006816019.1;locus_tag=J4731_13560;product=flavin reductase family protein;protein_id=MBO1929263.1;transl_table=11
JAGETS010000025.1	Genbank	pseudogene	5626	6409	.	+	.	ID=gene-J4731_13565;Name=J4731_13565;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_13565;pseudo=true
JAGETS010000025.1	Protein Homology	CDS	5626	6409	.	+	0	ID=cds-J4731_13565;Parent=gene-J4731_13565;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002439070.1;locus_tag=J4731_13565;product=cyclase family protein;pseudo=true;transl_table=11
JAGETS010000025.1	Genbank	pseudogene	6450	7998	.	+	.	ID=gene-J4731_13570;Name=J4731_13570;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_13570;pseudo=true
JAGETS010000025.1	Protein Homology	CDS	6450	7998	.	+	0	ID=cds-J4731_13570;Parent=gene-J4731_13570;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008913771.1;locus_tag=J4731_13570;product=NAD(P)/FAD-dependent oxidoreductase;pseudo=true;transl_table=11
JAGETS010000025.1	Genbank	pseudogene	8083	8987	.	+	.	ID=gene-J4731_13575;Name=J4731_13575;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_13575;pseudo=true
JAGETS010000025.1	Protein Homology	CDS	8083	8987	.	+	0	ID=cds-J4731_13575;Parent=gene-J4731_13575;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006663340.1;locus_tag=J4731_13575;product=transporter;pseudo=true;transl_table=11
JAGETS010000025.1	Genbank	pseudogene	8980	10020	.	-	.	ID=gene-J4731_13580;Name=J4731_13580;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_13580;pseudo=true
JAGETS010000025.1	Protein Homology	CDS	8980	10020	.	-	0	ID=cds-J4731_13580;Parent=gene-J4731_13580;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006663339.1;locus_tag=J4731_13580;product=AraC family transcriptional regulator;pseudo=true;transl_table=11
JAGETS010000025.1	Genbank	pseudogene	10757	12936	.	+	.	ID=gene-J4731_13585;Name=J4731_13585;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_13585;pseudo=true
JAGETS010000025.1	Protein Homology	CDS	10757	12936	.	+	0	ID=cds-J4731_13585;Parent=gene-J4731_13585;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006816013.1;locus_tag=J4731_13585;product=indolepyruvate ferredoxin oxidoreductase subunit alpha;pseudo=true;transl_table=11
JAGETS010000025.1	Genbank	pseudogene	13017	14455	.	+	.	ID=gene-J4731_13590;Name=J4731_13590;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_13590;pseudo=true
JAGETS010000025.1	Protein Homology	CDS	13017	14455	.	+	0	ID=cds-J4731_13590;Parent=gene-J4731_13590;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004261106.1;locus_tag=J4731_13590;product=indolepyruvate oxidoreductase subunit beta family protein;pseudo=true;transl_table=11
JAGETS010000025.1	Genbank	pseudogene	14466	14885	.	+	.	ID=gene-J4731_13595;Name=J4731_13595;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_13595;pseudo=true
JAGETS010000025.1	Protein Homology	CDS	14466	14885	.	+	0	ID=cds-J4731_13595;Parent=gene-J4731_13595;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004261103.1;locus_tag=J4731_13595;product=acyl-CoA thioesterase;pseudo=true;transl_table=11
JAGETS010000025.1	Genbank	pseudogene	14902	17169	.	+	.	ID=gene-J4731_13600;Name=J4731_13600;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_13600;pseudo=true
JAGETS010000025.1	Protein Homology	CDS	14902	17169	.	+	0	ID=cds-J4731_13600;Parent=gene-J4731_13600;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006816010.1;locus_tag=J4731_13600;product=bifunctional salicylyl-CoA 5-hydroxylase/oxidoreductase;pseudo=true;transl_table=11
JAGETS010000025.1	Genbank	pseudogene	17203	18309	.	+	.	ID=gene-J4731_13605;Name=J4731_13605;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_13605;pseudo=true
JAGETS010000025.1	Protein Homology	CDS	17203	18309	.	+	0	ID=cds-J4731_13605;Parent=gene-J4731_13605;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004261095.1;locus_tag=J4731_13605;product=cupin domain-containing protein;pseudo=true;transl_table=11
JAGETS010000025.1	Genbank	pseudogene	18410	19313	.	+	.	ID=gene-J4731_13610;Name=J4731_13610;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_13610;pseudo=true
JAGETS010000025.1	Protein Homology	CDS	18410	19313	.	+	0	ID=cds-J4731_13610;Parent=gene-J4731_13610;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006816008.1;locus_tag=J4731_13610;product=fumarylacetoacetate hydrolase family protein;pseudo=true;transl_table=11
JAGETS010000025.1	Genbank	pseudogene	19321	20349	.	+	.	ID=gene-J4731_13615;Name=J4731_13615;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_13615;pseudo=true
JAGETS010000025.1	Protein Homology	CDS	19321	20349	.	+	0	ID=cds-J4731_13615;Parent=gene-J4731_13615;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004261090.1;locus_tag=J4731_13615;product=carbon-nitrogen hydrolase family protein;pseudo=true;transl_table=11
JAGETS010000025.1	Genbank	pseudogene	20403	21097	.	+	.	ID=gene-J4731_13620;Name=J4731_13620;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_13620;pseudo=true
JAGETS010000025.1	Protein Homology	CDS	20403	21097	.	+	0	ID=cds-J4731_13620;Parent=gene-J4731_13620;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_053111714.1;locus_tag=J4731_13620;product=Asp/Glu racemase;pseudo=true;transl_table=11
JAGETS010000025.1	Genbank	pseudogene	21177	21561	.	+	.	ID=gene-J4731_13625;Name=J4731_13625;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_13625;pseudo=true
JAGETS010000025.1	Protein Homology	CDS	21177	21561	.	+	0	ID=cds-J4731_13625;Parent=gene-J4731_13625;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002439085.1;locus_tag=J4731_13625;product=MarR family transcriptional regulator;pseudo=true;transl_table=11
JAGETS010000025.1	Genbank	pseudogene	21985	23619	.	+	.	ID=gene-J4731_13630;Name=J4731_13630;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_13630;pseudo=true
JAGETS010000025.1	Protein Homology	CDS	21985	23619	.	+	0	ID=cds-J4731_13630;Parent=gene-J4731_13630;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008913784.1;locus_tag=J4731_13630;product=Na+/H+ antiporter;pseudo=true;transl_table=11
JAGETS010000025.1	Genbank	pseudogene	23885	24378	.	+	.	ID=gene-J4731_13635;Name=J4731_13635;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_13635;pseudo=true
JAGETS010000025.1	Protein Homology	CDS	23885	24378	.	+	0	ID=cds-J4731_13635;Parent=gene-J4731_13635;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004239312.1;locus_tag=J4731_13635;product=ATP-binding protein;pseudo=true;transl_table=11
JAGETS010000025.1	Genbank	pseudogene	24435	25049	.	-	.	ID=gene-J4731_13640;Name=J4731_13640;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_13640;pseudo=true
JAGETS010000025.1	Protein Homology	CDS	24435	25049	.	-	0	ID=cds-J4731_13640;Parent=gene-J4731_13640;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013357246.1;locus_tag=J4731_13640;product=flavin reductase family protein;pseudo=true;transl_table=11
JAGETS010000025.1	Genbank	gene	25687	25833	.	+	.	ID=gene-J4731_13645;Name=J4731_13645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_13645
JAGETS010000025.1	Protein Homology	CDS	25687	25833	.	+	0	ID=cds-MBO1929264.1;Parent=gene-J4731_13645;Dbxref=NCBI_GP:MBO1929264.1;Name=MBO1929264.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008913158.1;locus_tag=J4731_13645;product=helix-turn-helix transcriptional regulator;protein_id=MBO1929264.1;transl_table=11
JAGETS010000025.1	Genbank	pseudogene	27415	29922	.	+	.	ID=gene-J4731_13650;Name=J4731_13650;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_13650;pseudo=true
JAGETS010000025.1	Protein Homology	CDS	27415	29922	.	+	0	ID=cds-J4731_13650;Parent=gene-J4731_13650;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004244880.1;locus_tag=J4731_13650;product=fimbria/pilus outer membrane usher protein;pseudo=true;transl_table=11
JAGETS010000025.1	Genbank	pseudogene	29919	30665	.	+	.	ID=gene-J4731_13655;Name=J4731_13655;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_13655;pseudo=true
JAGETS010000025.1	Protein Homology	CDS	29919	30665	.	+	0	ID=cds-J4731_13655;Parent=gene-J4731_13655;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004261058.1;locus_tag=J4731_13655;product=fimbria/pilus periplasmic chaperone;pseudo=true;transl_table=11
JAGETS010000025.1	Genbank	gene	30757	31023	.	+	.	ID=gene-J4731_13660;Name=J4731_13660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_13660
JAGETS010000025.1	GeneMarkS-2+	CDS	30757	31023	.	+	0	ID=cds-MBO1929265.1;Parent=gene-J4731_13660;Dbxref=NCBI_GP:MBO1929265.1;Name=MBO1929265.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_13660;product=hypothetical protein;protein_id=MBO1929265.1;transl_table=11
JAGETS010000025.1	Genbank	gene	31102	31347	.	+	.	ID=gene-J4731_13665;Name=J4731_13665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_13665
JAGETS010000025.1	GeneMarkS-2+	CDS	31102	31347	.	+	0	ID=cds-MBO1929266.1;Parent=gene-J4731_13665;Dbxref=NCBI_GP:MBO1929266.1;Name=MBO1929266.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_13665;product=type 1 fimbrial protein;protein_id=MBO1929266.1;transl_table=11
JAGETS010000025.1	Genbank	pseudogene	31669	32144	.	+	.	ID=gene-J4731_13670;Name=J4731_13670;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_13670;pseudo=true
JAGETS010000025.1	Protein Homology	CDS	31669	32144	.	+	0	ID=cds-J4731_13670;Parent=gene-J4731_13670;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006536883.1;locus_tag=J4731_13670;product=fimbrial protein;pseudo=true;transl_table=11
JAGETS010000025.1	Genbank	pseudogene	32303	33290	.	+	.	ID=gene-J4731_13675;Name=J4731_13675;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_13675;pseudo=true
JAGETS010000025.1	Protein Homology	CDS	32303	33290	.	+	0	ID=cds-J4731_13675;Parent=gene-J4731_13675;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006663320.1;locus_tag=J4731_13675;product=adhesin;pseudo=true;transl_table=11
JAGETS010000025.1	Genbank	pseudogene	33366	34086	.	-	.	ID=gene-J4731_13680;Name=J4731_13680;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_13680;pseudo=true
JAGETS010000025.1	Protein Homology	CDS	33366	34086	.	-	0	ID=cds-J4731_13680;Parent=gene-J4731_13680;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006658280.1;locus_tag=J4731_13680;product=helix-turn-helix transcriptional regulator;pseudo=true;transl_table=11
JAGETS010000025.1	Genbank	pseudogene	34277	36666	.	+	.	ID=gene-J4731_13685;Name=J4731_13685;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_13685;pseudo=true
JAGETS010000025.1	Protein Homology	CDS	34277	36666	.	+	0	ID=cds-J4731_13685;Parent=gene-J4731_13685;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002435712.1;locus_tag=J4731_13685;product=molybdopterin-dependent oxidoreductase;pseudo=true;transl_table=11
JAGETS010000025.1	Genbank	pseudogene	36663	37297	.	+	.	ID=gene-J4731_13690;Name=dmsB;gbkey=Gene;gene=dmsB;gene_biotype=pseudogene;locus_tag=J4731_13690;pseudo=true
JAGETS010000025.1	Protein Homology	CDS	36663	37297	.	+	0	ID=cds-J4731_13690;Parent=gene-J4731_13690;Note=frameshifted%3B internal stop;gbkey=CDS;gene=dmsB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012124849.1;locus_tag=J4731_13690;product=dimethylsulfoxide reductase subunit B;pseudo=true;transl_table=11
JAGETS010000025.1	Genbank	gene	37290	37697	.	+	.	ID=gene-J4731_13695;Name=J4731_13695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_13695
JAGETS010000025.1	Protein Homology	CDS	37290	37697	.	+	0	ID=cds-MBO1929267.1;Parent=gene-J4731_13695;Dbxref=NCBI_GP:MBO1929267.1;Name=MBO1929267.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016838.1;locus_tag=J4731_13695;product=dimethyl sulfoxide reductase anchor subunit;protein_id=MBO1929267.1;transl_table=11
JAGETS010000025.1	Genbank	gene	38404	38535	.	+	.	ID=gene-J4731_13700;Name=J4731_13700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_13700
JAGETS010000025.1	Protein Homology	CDS	38404	38535	.	+	0	ID=cds-MBO1929268.1;Parent=gene-J4731_13700;Dbxref=NCBI_GP:MBO1929268.1;Name=MBO1929268.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014651.1;locus_tag=J4731_13700;product=molecular chaperone TorD family protein;protein_id=MBO1929268.1;transl_table=11
JAGETS010000025.1	Genbank	gene	38963	39385	.	+	.	ID=gene-J4731_13705;Name=J4731_13705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_13705
JAGETS010000025.1	Protein Homology	CDS	38963	39385	.	+	0	ID=cds-MBO1929269.1;Parent=gene-J4731_13705;Dbxref=NCBI_GP:MBO1929269.1;Name=MBO1929269.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014656892.1;locus_tag=J4731_13705;product=DoxX family protein;protein_id=MBO1929269.1;transl_table=11
JAGETS010000025.1	Genbank	gene	39565	39834	.	+	.	ID=gene-J4731_13710;Name=J4731_13710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_13710
JAGETS010000025.1	Protein Homology	CDS	39565	39834	.	+	0	ID=cds-MBO1929270.1;Parent=gene-J4731_13710;Dbxref=NCBI_GP:MBO1929270.1;Name=MBO1929270.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012776389.1;locus_tag=J4731_13710;product=type II toxin-antitoxin system Phd/YefM family antitoxin;protein_id=MBO1929270.1;transl_table=11
JAGETS010000025.1	Genbank	gene	39837	40130	.	+	.	ID=gene-J4731_13715;Name=J4731_13715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_13715
JAGETS010000025.1	Protein Homology	CDS	39837	40130	.	+	0	ID=cds-MBO1929271.1;Parent=gene-J4731_13715;Dbxref=NCBI_GP:MBO1929271.1;Name=MBO1929271.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016149384.1;locus_tag=J4731_13715;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=MBO1929271.1;transl_table=11
JAGETS010000025.1	Genbank	gene	40543	40854	.	+	.	ID=gene-J4731_13720;Name=J4731_13720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_13720
JAGETS010000025.1	GeneMarkS-2+	CDS	40543	40854	.	+	0	ID=cds-MBO1929272.1;Parent=gene-J4731_13720;Dbxref=NCBI_GP:MBO1929272.1;Name=MBO1929272.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_13720;product=hypothetical protein;protein_id=MBO1929272.1;transl_table=11
JAGETS010000025.1	Genbank	pseudogene	41312	42478	.	-	.	ID=gene-J4731_13725;Name=J4731_13725;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_13725;pseudo=true
JAGETS010000025.1	Protein Homology	CDS	41312	42478	.	-	0	ID=cds-J4731_13725;Parent=gene-J4731_13725;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001105504.1;locus_tag=J4731_13725;product=RtcB family protein;pseudo=true;transl_table=11
JAGETS010000025.1	Genbank	pseudogene	42544	43587	.	-	.	ID=gene-J4731_13730;Name=J4731_13730;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_13730;pseudo=true
JAGETS010000025.1	Protein Homology	CDS	42544	43587	.	-	0	ID=cds-J4731_13730;Parent=gene-J4731_13730;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000902058.1;locus_tag=J4731_13730;product=slipin family protein;pseudo=true;transl_table=11
JAGETS010000025.1	Genbank	pseudogene	44133	45703	.	+	.	ID=gene-J4731_13735;Name=rtcR;gbkey=Gene;gene=rtcR;gene_biotype=pseudogene;locus_tag=J4731_13735;pseudo=true
JAGETS010000025.1	Protein Homology	CDS	44133	45703	.	+	0	ID=cds-J4731_13735;Parent=gene-J4731_13735;Note=frameshifted;gbkey=CDS;gene=rtcR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004260969.1;locus_tag=J4731_13735;product=RNA repair transcriptional activator RtcR;pseudo=true;transl_table=11
JAGETS010000025.1	Genbank	gene	45771	46031	.	-	.	ID=gene-J4731_13740;Name=J4731_13740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_13740
JAGETS010000025.1	GeneMarkS-2+	CDS	45771	46031	.	-	0	ID=cds-MBO1929273.1;Parent=gene-J4731_13740;Dbxref=NCBI_GP:MBO1929273.1;Name=MBO1929273.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_13740;product=hypothetical protein;protein_id=MBO1929273.1;transl_table=11
JAGETS010000025.1	Genbank	gene	46063	46557	.	-	.	ID=gene-J4731_13745;Name=J4731_13745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_13745
JAGETS010000025.1	Protein Homology	CDS	46063	46557	.	-	0	ID=cds-MBO1929274.1;Parent=gene-J4731_13745;Dbxref=NCBI_GP:MBO1929274.1;Name=MBO1929274.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014428.1;locus_tag=J4731_13745;product=Ig-like domain-containing protein;protein_id=MBO1929274.1;transl_table=11
JAGETS010000025.1	Genbank	gene	47058	47360	.	-	.	ID=gene-J4731_13750;Name=J4731_13750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_13750
JAGETS010000025.1	Protein Homology	CDS	47058	47360	.	-	0	ID=cds-MBO1929275.1;Parent=gene-J4731_13750;Dbxref=NCBI_GP:MBO1929275.1;Name=MBO1929275.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF023351.1;locus_tag=J4731_13750;product=inverse autotransporter beta domain-containing protein;protein_id=MBO1929275.1;transl_table=11
JAGETS010000025.1	Genbank	gene	47369	47575	.	-	.	ID=gene-J4731_13755;Name=J4731_13755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_13755
JAGETS010000025.1	Protein Homology	CDS	47369	47575	.	-	0	ID=cds-MBO1929276.1;Parent=gene-J4731_13755;Dbxref=NCBI_GP:MBO1929276.1;Name=MBO1929276.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF023351.1;locus_tag=J4731_13755;product=inverse autotransporter beta domain-containing protein;protein_id=MBO1929276.1;transl_table=11
JAGETS010000025.1	Genbank	gene	47551	47685	.	-	.	ID=gene-J4731_13760;Name=J4731_13760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_13760
JAGETS010000025.1	Protein Homology	CDS	47551	47685	.	-	0	ID=cds-MBO1929277.1;Parent=gene-J4731_13760;Dbxref=NCBI_GP:MBO1929277.1;Name=MBO1929277.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF023351.1;locus_tag=J4731_13760;product=hypothetical protein;protein_id=MBO1929277.1;transl_table=11
JAGETS010000025.1	Genbank	gene	47751	48089	.	-	.	ID=gene-J4731_13765;Name=J4731_13765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_13765
JAGETS010000025.1	GeneMarkS-2+	CDS	47751	48089	.	-	0	ID=cds-MBO1929278.1;Parent=gene-J4731_13765;Dbxref=NCBI_GP:MBO1929278.1;Name=MBO1929278.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_13765;product=hypothetical protein;protein_id=MBO1929278.1;transl_table=11
JAGETS010000025.1	Genbank	pseudogene	48179	49081	.	+	.	ID=gene-J4731_13770;Name=rnz;gbkey=Gene;gene=rnz;gene_biotype=pseudogene;locus_tag=J4731_13770;pseudo=true
JAGETS010000025.1	Protein Homology	CDS	48179	49081	.	+	0	ID=cds-J4731_13770;Parent=gene-J4731_13770;Note=frameshifted;gbkey=CDS;gene=rnz;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006663308.1;locus_tag=J4731_13770;product=ribonuclease Z;pseudo=true;transl_table=11
JAGETS010000025.1	Genbank	pseudogene	49143	49889	.	-	.	ID=gene-J4731_13775;Name=J4731_13775;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_13775;pseudo=true
JAGETS010000025.1	Protein Homology	CDS	49143	49889	.	-	0	ID=cds-J4731_13775;Parent=gene-J4731_13775;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014656887.1;locus_tag=J4731_13775;product=DeoR family transcriptional regulator;pseudo=true;transl_table=11
JAGETS010000025.1	Genbank	pseudogene	49943	50608	.	-	.	ID=gene-J4731_13780;Name=J4731_13780;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_13780;pseudo=true
JAGETS010000025.1	Protein Homology	CDS	49943	50608	.	-	0	ID=cds-J4731_13780;Parent=gene-J4731_13780;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004260954.1;locus_tag=J4731_13780;product=deoxyribose-phosphate aldolase;pseudo=true;transl_table=11
JAGETS010000025.1	Genbank	pseudogene	50777	51699	.	+	.	ID=gene-J4731_13785;Name=rbsK;gbkey=Gene;gene=rbsK;gene_biotype=pseudogene;locus_tag=J4731_13785;pseudo=true
JAGETS010000025.1	Protein Homology	CDS	50777	51699	.	+	0	ID=cds-J4731_13785;Parent=gene-J4731_13785;Note=frameshifted;gbkey=CDS;gene=rbsK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014656885.1;locus_tag=J4731_13785;product=ribokinase;pseudo=true;transl_table=11
JAGETS010000025.1	Genbank	pseudogene	51808	53101	.	+	.	ID=gene-J4731_13790;Name=fucP;gbkey=Gene;gene=fucP;gene_biotype=pseudogene;locus_tag=J4731_13790;pseudo=true
JAGETS010000025.1	Protein Homology	CDS	51808	53101	.	+	0	ID=cds-J4731_13790;Parent=gene-J4731_13790;Note=frameshifted%3B internal stop;gbkey=CDS;gene=fucP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004260949.1;locus_tag=J4731_13790;product=L-fucose:H+ symporter permease;pseudo=true;transl_table=11
JAGETS010000025.1	Genbank	pseudogene	53165	54173	.	+	.	ID=gene-J4731_13795;Name=J4731_13795;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_13795;pseudo=true
JAGETS010000025.1	Protein Homology	CDS	53165	54173	.	+	0	ID=cds-J4731_13795;Parent=gene-J4731_13795;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006663305.1;locus_tag=J4731_13795;product=aldose 1-epimerase family protein;pseudo=true;transl_table=11
JAGETS010000025.1	Genbank	pseudogene	54206	54517	.	-	.	ID=gene-J4731_13800;Name=J4731_13800;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_13800;pseudo=true
JAGETS010000025.1	Protein Homology	CDS	54206	54517	.	-	0	ID=cds-J4731_13800;Parent=gene-J4731_13800;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006658298.1;locus_tag=J4731_13800;product=DUF2750 domain-containing protein;pseudo=true;transl_table=11
JAGETS010000025.1	Genbank	gene	54785	54964	.	+	.	ID=gene-J4731_13805;Name=J4731_13805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_13805
JAGETS010000025.1	GeneMarkS-2+	CDS	54785	54964	.	+	0	ID=cds-MBO1929279.1;Parent=gene-J4731_13805;Dbxref=NCBI_GP:MBO1929279.1;Name=MBO1929279.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_13805;product=hypothetical protein;protein_id=MBO1929279.1;transl_table=11
JAGETS010000025.1	Genbank	pseudogene	55024	55759	.	+	.	ID=gene-J4731_13810;Name=J4731_13810;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_13810;pseudo=true
JAGETS010000025.1	Protein Homology	CDS	55024	55759	.	+	0	ID=cds-J4731_13810;Parent=gene-J4731_13810;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004234833.1;locus_tag=J4731_13810;product=mechanosensitive ion channel family protein;pseudo=true;transl_table=11
JAGETS010000025.1	Genbank	pseudogene	56030	58184	.	+	.	ID=gene-J4731_13815;Name=speC;gbkey=Gene;gene=speC;gene_biotype=pseudogene;locus_tag=J4731_13815;pseudo=true
JAGETS010000025.1	Protein Homology	CDS	56030	58184	.	+	0	ID=cds-J4731_13815;Parent=gene-J4731_13815;Note=frameshifted;gbkey=CDS;gene=speC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005272569.1;locus_tag=J4731_13815;product=ornithine decarboxylase;pseudo=true;transl_table=11
JAGETS010000025.1	Genbank	pseudogene	58282	59200	.	+	.	ID=gene-J4731_13820;Name=J4731_13820;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_13820;pseudo=true
JAGETS010000025.1	Protein Homology	CDS	58282	59200	.	+	0	ID=cds-J4731_13820;Parent=gene-J4731_13820;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013814700.1;locus_tag=J4731_13820;product=nucleoside hydrolase;pseudo=true;transl_table=11
JAGETS010000025.1	Genbank	pseudogene	59204	59719	.	+	.	ID=gene-J4731_13825;Name=J4731_13825;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_13825;pseudo=true
JAGETS010000025.1	Protein Homology	CDS	59204	59719	.	+	0	ID=cds-J4731_13825;Parent=gene-J4731_13825;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004916324.1;locus_tag=J4731_13825;product=hypothetical protein;pseudo=true;transl_table=11
JAGETS010000025.1	Genbank	pseudogene	59883	60417	.	-	.	ID=gene-J4731_13830;Name=J4731_13830;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_13830;pseudo=true
JAGETS010000025.1	Protein Homology	CDS	59883	60417	.	-	0	ID=cds-J4731_13830;Parent=gene-J4731_13830;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017458063.1;locus_tag=J4731_13830;product=CbrC family protein;pseudo=true;transl_table=11
JAGETS010000025.1	Genbank	gene	60697	60906	.	+	.	ID=gene-J4731_13835;Name=J4731_13835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_13835
JAGETS010000025.1	Protein Homology	CDS	60697	60906	.	+	0	ID=cds-MBO1929280.1;Parent=gene-J4731_13835;Dbxref=NCBI_GP:MBO1929280.1;Name=MBO1929280.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004260921.1;locus_tag=J4731_13835;product=DUF1471 domain-containing protein;protein_id=MBO1929280.1;transl_table=11
JAGETS010000025.1	Genbank	pseudogene	61044	61665	.	+	.	ID=gene-J4731_13840;Name=J4731_13840;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_13840;pseudo=true
JAGETS010000025.1	Protein Homology	CDS	61044	61665	.	+	0	ID=cds-J4731_13840;Parent=gene-J4731_13840;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006321239.1;locus_tag=J4731_13840;product=hydrolase;pseudo=true;transl_table=11
JAGETS010000025.1	Genbank	pseudogene	61877	62817	.	+	.	ID=gene-J4731_13845;Name=dusA;gbkey=Gene;gene=dusA;gene_biotype=pseudogene;locus_tag=J4731_13845;pseudo=true
JAGETS010000025.1	Protein Homology	CDS	61877	62817	.	+	0	ID=cds-J4731_13845;Parent=gene-J4731_13845;Note=frameshifted%3B internal stop;gbkey=CDS;gene=dusA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004719413.1;locus_tag=J4731_13845;product=tRNA dihydrouridine(20/20a) synthase DusA;pseudo=true;transl_table=11
JAGETS010000025.1	Genbank	pseudogene	62910	63884	.	-	.	ID=gene-J4731_13850;Name=J4731_13850;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_13850;pseudo=true
JAGETS010000025.1	Protein Homology	CDS	62910	63884	.	-	0	ID=cds-J4731_13850;Parent=gene-J4731_13850;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019082201.1;locus_tag=J4731_13850;product=NADPH:quinone reductase;pseudo=true;transl_table=11
JAGETS010000025.1	Genbank	pseudogene	64146	65492	.	+	.	ID=gene-J4731_13855;Name=dnaB;gbkey=Gene;gene=dnaB;gene_biotype=pseudogene;locus_tag=J4731_13855;pseudo=true
JAGETS010000025.1	Protein Homology	CDS	64146	65492	.	+	0	ID=cds-J4731_13855;Parent=gene-J4731_13855;Note=frameshifted%3B internal stop;gbkey=CDS;gene=dnaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418476.1;locus_tag=J4731_13855;product=replicative DNA helicase;pseudo=true;transl_table=11
JAGETS010000025.1	Genbank	pseudogene	65782	66861	.	+	.	ID=gene-J4731_13860;Name=alr;gbkey=Gene;gene=alr;gene_biotype=pseudogene;locus_tag=J4731_13860;pseudo=true
JAGETS010000025.1	Protein Homology	CDS	65782	66861	.	+	0	ID=cds-J4731_13860;Parent=gene-J4731_13860;Note=frameshifted;gbkey=CDS;gene=alr;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014656878.1;locus_tag=J4731_13860;product=alanine racemase;pseudo=true;transl_table=11
JAGETS010000025.1	Genbank	pseudogene	66964	68152	.	+	.	ID=gene-J4731_13865;Name=J4731_13865;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_13865;pseudo=true
JAGETS010000025.1	Protein Homology	CDS	66964	68152	.	+	0	ID=cds-J4731_13865;Parent=gene-J4731_13865;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013185364.1;locus_tag=J4731_13865;product=aspartate/tyrosine/aromatic aminotransferase;pseudo=true;transl_table=11
JAGETS010000025.1	Genbank	pseudogene	68232	71054	.	-	.	ID=gene-J4731_13870;Name=uvrA;gbkey=Gene;gene=uvrA;gene_biotype=pseudogene;locus_tag=J4731_13870;pseudo=true
JAGETS010000025.1	Protein Homology	CDS	68232	71054	.	-	0	ID=cds-J4731_13870;Parent=gene-J4731_13870;Note=frameshifted;gbkey=CDS;gene=uvrA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004249165.1;locus_tag=J4731_13870;product=excinuclease ABC subunit UvrA;pseudo=true;transl_table=11
JAGETS010000025.1	Genbank	pseudogene	71739	72251	.	+	.	ID=gene-J4731_13875;Name=J4731_13875;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_13875;pseudo=true
JAGETS010000025.1	Protein Homology	CDS	71739	72251	.	+	0	ID=cds-J4731_13875;Parent=gene-J4731_13875;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463121.1;locus_tag=J4731_13875;product=single-stranded DNA-binding protein;pseudo=true;transl_table=11
JAGETS010000025.1	Genbank	pseudogene	72531	72937	.	-	.	ID=gene-J4731_13880;Name=J4731_13880;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_13880;pseudo=true
JAGETS010000025.1	Protein Homology	CDS	72531	72937	.	-	0	ID=cds-J4731_13880;Parent=gene-J4731_13880;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004924490.1;locus_tag=J4731_13880;product=helix-turn-helix domain-containing protein;pseudo=true;transl_table=11
JAGETS010000025.1	Genbank	pseudogene	73180	74342	.	-	.	ID=gene-J4731_13885;Name=J4731_13885;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_13885;pseudo=true
JAGETS010000025.1	Protein Homology	CDS	73180	74342	.	-	0	ID=cds-J4731_13885;Parent=gene-J4731_13885;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004260887.1;locus_tag=J4731_13885;product=MFS transporter;pseudo=true;transl_table=11
JAGETS010000025.1	Genbank	gene	74664	74891	.	+	.	ID=gene-J4731_13890;Name=J4731_13890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_13890
JAGETS010000025.1	GeneMarkS-2+	CDS	74664	74891	.	+	0	ID=cds-MBO1929281.1;Parent=gene-J4731_13890;Dbxref=NCBI_GP:MBO1929281.1;Name=MBO1929281.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_13890;product=hypothetical protein;protein_id=MBO1929281.1;transl_table=11
JAGETS010000025.1	Genbank	pseudogene	74916	76537	.	+	.	ID=gene-J4731_13895;Name=ilvB;gbkey=Gene;gene=ilvB;gene_biotype=pseudogene;locus_tag=J4731_13895;pseudo=true
JAGETS010000025.1	Protein Homology	CDS	74916	76537	.	+	0	ID=cds-J4731_13895;Parent=gene-J4731_13895;Note=frameshifted%3B internal stop;gbkey=CDS;gene=ilvB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246142.1;locus_tag=J4731_13895;product=acetolactate synthase large subunit;pseudo=true;transl_table=11
JAGETS010000025.1	Genbank	pseudogene	76540	76823	.	+	.	ID=gene-J4731_13900;Name=ilvN;gbkey=Gene;gene=ilvN;gene_biotype=pseudogene;locus_tag=J4731_13900;pseudo=true
JAGETS010000025.1	Protein Homology	CDS	76540	76823	.	+	0	ID=cds-J4731_13900;Parent=gene-J4731_13900;Note=frameshifted;gbkey=CDS;gene=ilvN;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004260877.1;locus_tag=J4731_13900;product=acetolactate synthase small subunit;pseudo=true;transl_table=11
JAGETS010000025.1	Genbank	pseudogene	77016	77619	.	+	.	ID=gene-J4731_13905;Name=J4731_13905;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_13905;pseudo=true
JAGETS010000025.1	Protein Homology	CDS	77016	77619	.	+	0	ID=cds-J4731_13905;Parent=gene-J4731_13905;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004260874.1;locus_tag=J4731_13905;product=hypothetical protein;pseudo=true;transl_table=11
JAGETS010000025.1	Genbank	pseudogene	77670	78190	.	-	.	ID=gene-J4731_13910;Name=J4731_13910;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_13910;pseudo=true
JAGETS010000025.1	Protein Homology	CDS	77670	78190	.	-	0	ID=cds-J4731_13910;Parent=gene-J4731_13910;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002442152.1;locus_tag=J4731_13910;product=helix-turn-helix domain-containing protein;pseudo=true;transl_table=11
JAGETS010000025.1	Genbank	pseudogene	78435	79198	.	+	.	ID=gene-J4731_13915;Name=J4731_13915;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_13915;pseudo=true
JAGETS010000025.1	Protein Homology	CDS	78435	79198	.	+	0	ID=cds-J4731_13915;Parent=gene-J4731_13915;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014656867.1;locus_tag=J4731_13915;product=sulfite exporter TauE/SafE family protein;pseudo=true;transl_table=11
JAGETS010000025.1	Genbank	pseudogene	79355	80547	.	+	.	ID=gene-J4731_13920;Name=J4731_13920;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_13920;pseudo=true
JAGETS010000025.1	Protein Homology	CDS	79355	80547	.	+	0	ID=cds-J4731_13920;Parent=gene-J4731_13920;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006658317.1;locus_tag=J4731_13920;product=MFS transporter;pseudo=true;transl_table=11
JAGETS010000025.1	Genbank	pseudogene	80594	82262	.	-	.	ID=gene-J4731_13925;Name=J4731_13925;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_13925;pseudo=true
JAGETS010000025.1	Protein Homology	CDS	80594	82262	.	-	0	ID=cds-J4731_13925;Parent=gene-J4731_13925;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004260865.1;locus_tag=J4731_13925;product=hypothetical protein;pseudo=true;transl_table=11
JAGETS010000025.1	Genbank	pseudogene	82887	84202	.	+	.	ID=gene-J4731_13930;Name=J4731_13930;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_13930;pseudo=true
JAGETS010000025.1	Protein Homology	CDS	82887	84202	.	+	0	ID=cds-J4731_13930;Parent=gene-J4731_13930;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002433966.1;locus_tag=J4731_13930;product=NCS2 family permease;pseudo=true;transl_table=11
JAGETS010000025.1	Genbank	pseudogene	84464	86094	.	+	.	ID=gene-J4731_13935;Name=J4731_13935;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_13935;pseudo=true
JAGETS010000025.1	Protein Homology	CDS	84464	86094	.	+	0	ID=cds-J4731_13935;Parent=gene-J4731_13935;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004704764.1;locus_tag=J4731_13935;product=Na+/H+ antiporter;pseudo=true;transl_table=11
JAGETS010000025.1	Genbank	pseudogene	86157	87046	.	+	.	ID=gene-J4731_13940;Name=J4731_13940;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_13940;pseudo=true
JAGETS010000025.1	Protein Homology	CDS	86157	87046	.	+	0	ID=cds-J4731_13940;Parent=gene-J4731_13940;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004260860.1;locus_tag=J4731_13940;product=DMT family transporter;pseudo=true;transl_table=11
JAGETS010000025.1	Genbank	pseudogene	86931	87883	.	-	.	ID=gene-J4731_13945;Name=metR;gbkey=Gene;gene=metR;gene_biotype=pseudogene;locus_tag=J4731_13945;pseudo=true
JAGETS010000025.1	Protein Homology	CDS	86931	87883	.	-	0	ID=cds-J4731_13945;Parent=gene-J4731_13945;Note=frameshifted%3B internal stop;gbkey=CDS;gene=metR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006658323.1;locus_tag=J4731_13945;product=HTH-type transcriptional regulator MetR;pseudo=true;transl_table=11
JAGETS010000025.1	Genbank	pseudogene	87992	90248	.	+	.	ID=gene-J4731_13950;Name=metE;gbkey=Gene;gene=metE;gene_biotype=pseudogene;locus_tag=J4731_13950;pseudo=true
JAGETS010000025.1	Protein Homology	CDS	87992	90248	.	+	0	ID=cds-J4731_13950;Parent=gene-J4731_13950;Note=frameshifted;gbkey=CDS;gene=metE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211526.1;locus_tag=J4731_13950;product=5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase;pseudo=true;transl_table=11
JAGETS010000025.1	Genbank	pseudogene	90308	90697	.	-	.	ID=gene-J4731_13955;Name=J4731_13955;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_13955;pseudo=true
JAGETS010000025.1	Protein Homology	CDS	90308	90697	.	-	0	ID=cds-J4731_13955;Parent=gene-J4731_13955;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006663291.1;locus_tag=J4731_13955;product=DUF937 domain-containing protein;pseudo=true;transl_table=11
JAGETS010000025.1	Genbank	pseudogene	91074	92002	.	+	.	ID=gene-J4731_13960;Name=J4731_13960;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_13960;pseudo=true
JAGETS010000025.1	Protein Homology	CDS	91074	92002	.	+	0	ID=cds-J4731_13960;Parent=gene-J4731_13960;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006663290.1;locus_tag=J4731_13960;product=NAD(P)-dependent oxidoreductase;pseudo=true;transl_table=11
JAGETS010000025.1	Genbank	pseudogene	91971	93218	.	+	.	ID=gene-J4731_13965;Name=J4731_13965;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_13965;pseudo=true
JAGETS010000025.1	Protein Homology	CDS	91971	93218	.	+	0	ID=cds-J4731_13965;Parent=gene-J4731_13965;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014656862.1;locus_tag=J4731_13965;product=four-carbon acid sugar kinase family protein;pseudo=true;transl_table=11
JAGETS010000025.1	Genbank	pseudogene	93211	93840	.	+	.	ID=gene-J4731_13970;Name=J4731_13970;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_13970;pseudo=true
JAGETS010000025.1	Protein Homology	CDS	93211	93840	.	+	0	ID=cds-J4731_13970;Parent=gene-J4731_13970;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004924692.1;locus_tag=J4731_13970;product=aldolase;pseudo=true;transl_table=11
JAGETS010000025.1	Genbank	pseudogene	93851	94623	.	+	.	ID=gene-J4731_13975;Name=J4731_13975;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_13975;pseudo=true
JAGETS010000025.1	Protein Homology	CDS	93851	94623	.	+	0	ID=cds-J4731_13975;Parent=gene-J4731_13975;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004260839.1;locus_tag=J4731_13975;product=hydroxypyruvate isomerase family protein;pseudo=true;transl_table=11
JAGETS010000025.1	Genbank	pseudogene	94637	95398	.	+	.	ID=gene-J4731_13980;Name=J4731_13980;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_13980;pseudo=true
JAGETS010000025.1	Protein Homology	CDS	94637	95398	.	+	0	ID=cds-J4731_13980;Parent=gene-J4731_13980;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006815946.1;locus_tag=J4731_13980;product=DeoR/GlpR transcriptional regulator;pseudo=true;transl_table=11
JAGETS010000025.1	Genbank	pseudogene	95460	96415	.	+	.	ID=gene-J4731_13985;Name=J4731_13985;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_13985;pseudo=true
JAGETS010000025.1	Protein Homology	CDS	95460	96415	.	+	0	ID=cds-J4731_13985;Parent=gene-J4731_13985;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008913849.1;locus_tag=J4731_13985;product=SDR family oxidoreductase;pseudo=true;transl_table=11
JAGETS010000025.1	Genbank	pseudogene	96419	97797	.	+	.	ID=gene-J4731_13990;Name=J4731_13990;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_13990;pseudo=true
JAGETS010000025.1	Protein Homology	CDS	96419	97797	.	+	0	ID=cds-J4731_13990;Parent=gene-J4731_13990;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004955809.1;locus_tag=J4731_13990;product=GntP family permease;pseudo=true;transl_table=11
JAGETS010000025.1	Genbank	pseudogene	98085	98841	.	+	.	ID=gene-J4731_13995;Name=udp;gbkey=Gene;gene=udp;gene_biotype=pseudogene;locus_tag=J4731_13995;pseudo=true
JAGETS010000025.1	Protein Homology	CDS	98085	98841	.	+	0	ID=cds-J4731_13995;Parent=gene-J4731_13995;Note=frameshifted;gbkey=CDS;gene=udp;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006658334.1;locus_tag=J4731_13995;product=uridine phosphorylase;pseudo=true;transl_table=11
JAGETS010000025.1	Genbank	pseudogene	99115	99845	.	+	.	ID=gene-J4731_14000;Name=J4731_14000;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_14000;pseudo=true
JAGETS010000025.1	Protein Homology	CDS	99115	99845	.	+	0	ID=cds-J4731_14000;Parent=gene-J4731_14000;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011148506.1;locus_tag=J4731_14000;product=tyrosine-protein phosphatase;pseudo=true;transl_table=11
JAGETS010000025.1	Genbank	gene	100038	100559	.	+	.	ID=gene-J4731_14005;Name=J4731_14005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_14005
JAGETS010000025.1	Protein Homology	CDS	100038	100559	.	+	0	ID=cds-MBO1929282.1;Parent=gene-J4731_14005;Dbxref=NCBI_GP:MBO1929282.1;Name=MBO1929282.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020893.1;locus_tag=J4731_14005;product=VTT domain-containing protein;protein_id=MBO1929282.1;transl_table=11
JAGETS010000025.1	Genbank	gene	100665	100808	.	+	.	ID=gene-J4731_14010;Name=J4731_14010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_14010
JAGETS010000025.1	GeneMarkS-2+	CDS	100665	100808	.	+	0	ID=cds-MBO1929283.1;Parent=gene-J4731_14010;Dbxref=NCBI_GP:MBO1929283.1;Name=MBO1929283.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_14010;product=hypothetical protein;protein_id=MBO1929283.1;transl_table=11
JAGETS010000025.1	Genbank	pseudogene	100818	102004	.	+	.	ID=gene-J4731_14015;Name=rmuC;gbkey=Gene;gene=rmuC;gene_biotype=pseudogene;locus_tag=J4731_14015;pseudo=true
JAGETS010000025.1	Protein Homology	CDS	100818	102004	.	+	0	ID=cds-J4731_14015;Parent=gene-J4731_14015;Note=frameshifted;gbkey=CDS;gene=rmuC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002444238.1;locus_tag=J4731_14015;product=DNA recombination protein RmuC;pseudo=true;transl_table=11
JAGETS010000025.1	Genbank	pseudogene	102082	102833	.	+	.	ID=gene-J4731_14020;Name=ubiE;gbkey=Gene;gene=ubiE;gene_biotype=pseudogene;locus_tag=J4731_14020;pseudo=true
JAGETS010000025.1	Protein Homology	CDS	102082	102833	.	+	0	ID=cds-J4731_14020;Parent=gene-J4731_14020;Note=frameshifted;gbkey=CDS;gene=ubiE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224474.1;locus_tag=J4731_14020;product=bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1%2C4-benzoquinol methylase UbiE;pseudo=true;transl_table=11
JAGETS010000025.1	Genbank	pseudogene	102835	103483	.	+	.	ID=gene-J4731_14025;Name=J4731_14025;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_14025;pseudo=true
JAGETS010000025.1	Protein Homology	CDS	102835	103483	.	+	0	ID=cds-J4731_14025;Parent=gene-J4731_14025;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006658339.1;locus_tag=J4731_14025;product=SCP2 sterol-binding domain-containing protein;pseudo=true;transl_table=11
JAGETS010000025.1	Genbank	pseudogene	103541	105090	.	+	.	ID=gene-J4731_14030;Name=ubiB;gbkey=Gene;gene=ubiB;gene_biotype=pseudogene;locus_tag=J4731_14030;pseudo=true
JAGETS010000025.1	Protein Homology	CDS	103541	105090	.	+	0	ID=cds-J4731_14030;Parent=gene-J4731_14030;Note=frameshifted;gbkey=CDS;gene=ubiB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004703920.1;locus_tag=J4731_14030;product=ubiquinone biosynthesis regulatory protein kinase UbiB;pseudo=true;transl_table=11
JAGETS010000025.1	Genbank	pseudogene	105206	105479	.	+	.	ID=gene-J4731_14035;Name=tatA;gbkey=Gene;gene=tatA;gene_biotype=pseudogene;locus_tag=J4731_14035;pseudo=true
JAGETS010000025.1	Protein Homology	CDS	105206	105479	.	+	0	ID=cds-J4731_14035;Parent=gene-J4731_14035;Note=frameshifted;gbkey=CDS;gene=tatA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004924718.1;locus_tag=J4731_14035;product=twin-arginine translocase TatA/TatE family subunit;pseudo=true;transl_table=11
JAGETS010000025.1	Genbank	pseudogene	105483	106019	.	+	.	ID=gene-J4731_14040;Name=tatB;gbkey=Gene;gene=tatB;gene_biotype=pseudogene;locus_tag=J4731_14040;pseudo=true
JAGETS010000025.1	Protein Homology	CDS	105483	106019	.	+	0	ID=cds-J4731_14040;Parent=gene-J4731_14040;Note=frameshifted%3B internal stop;gbkey=CDS;gene=tatB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006815935.1;locus_tag=J4731_14040;product=Sec-independent protein translocase subunit TatB;pseudo=true;transl_table=11
JAGETS010000025.1	Genbank	pseudogene	106023	106782	.	+	.	ID=gene-J4731_14045;Name=tatC;gbkey=Gene;gene=tatC;gene_biotype=pseudogene;locus_tag=J4731_14045;pseudo=true
JAGETS010000025.1	Protein Homology	CDS	106023	106782	.	+	0	ID=cds-J4731_14045;Parent=gene-J4731_14045;Note=frameshifted%3B internal stop;gbkey=CDS;gene=tatC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004249525.1;locus_tag=J4731_14045;product=Sec-independent protein translocase subunit TatC;pseudo=true;transl_table=11
JAGETS010000025.1	Genbank	gene	106861	107352	.	-	.	ID=gene-J4731_14050;Name=rfaH;gbkey=Gene;gene=rfaH;gene_biotype=protein_coding;locus_tag=J4731_14050
JAGETS010000025.1	Protein Homology	CDS	106861	107352	.	-	0	ID=cds-MBO1929284.1;Parent=gene-J4731_14050;Dbxref=NCBI_GP:MBO1929284.1;Name=MBO1929284.1;gbkey=CDS;gene=rfaH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006815933.1;locus_tag=J4731_14050;product=transcription/translation regulatory transformer protein RfaH;protein_id=MBO1929284.1;transl_table=11
JAGETS010000025.1	Genbank	pseudogene	107488	108238	.	+	.	ID=gene-J4731_14055;Name=pepE;gbkey=Gene;gene=pepE;gene_biotype=pseudogene;locus_tag=J4731_14055;pseudo=true
JAGETS010000025.1	Protein Homology	CDS	107488	108238	.	+	0	ID=cds-J4731_14055;Parent=gene-J4731_14055;Note=frameshifted;gbkey=CDS;gene=pepE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008913865.1;locus_tag=J4731_14055;product=dipeptidase PepE;pseudo=true;transl_table=11
JAGETS010000025.1	Genbank	pseudogene	108480	109944	.	+	.	ID=gene-J4731_14060;Name=ubiD;gbkey=Gene;gene=ubiD;gene_biotype=pseudogene;locus_tag=J4731_14060;pseudo=true
JAGETS010000025.1	Protein Homology	CDS	108480	109944	.	+	0	ID=cds-J4731_14060;Parent=gene-J4731_14060;Note=frameshifted;gbkey=CDS;gene=ubiD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007369131.1;locus_tag=J4731_14060;product=4-hydroxy-3-polyprenylbenzoate decarboxylase;pseudo=true;transl_table=11
JAGETS010000025.1	Genbank	pseudogene	109955	110654	.	+	.	ID=gene-J4731_14065;Name=fre;gbkey=Gene;gene=fre;gene_biotype=pseudogene;locus_tag=J4731_14065;pseudo=true
JAGETS010000025.1	Protein Homology	CDS	109955	110654	.	+	0	ID=cds-J4731_14065;Parent=gene-J4731_14065;Note=frameshifted;gbkey=CDS;gene=fre;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014656858.1;locus_tag=J4731_14065;product=NAD(P)H-flavin reductase;pseudo=true;transl_table=11
JAGETS010000025.1	Genbank	pseudogene	111012	112156	.	-	.	ID=gene-J4731_14070;Name=fadA;gbkey=Gene;gene=fadA;gene_biotype=pseudogene;locus_tag=J4731_14070;pseudo=true
JAGETS010000025.1	Protein Homology	CDS	111012	112156	.	-	0	ID=cds-J4731_14070;Parent=gene-J4731_14070;Note=frameshifted;gbkey=CDS;gene=fadA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006663280.1;locus_tag=J4731_14070;product=acetyl-CoA C-acyltransferase FadA;pseudo=true;transl_table=11
JAGETS010000025.1	Genbank	pseudogene	112184	114332	.	-	.	ID=gene-J4731_14075;Name=fadB;gbkey=Gene;gene=fadB;gene_biotype=pseudogene;locus_tag=J4731_14075;pseudo=true
JAGETS010000025.1	Protein Homology	CDS	112184	114332	.	-	0	ID=cds-J4731_14075;Parent=gene-J4731_14075;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;gene=fadB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013185341.1;locus_tag=J4731_14075;product=fatty acid oxidation complex subunit alpha FadB;pseudo=true;transl_table=11
JAGETS010000025.1	Genbank	pseudogene	114621	115910	.	+	.	ID=gene-J4731_14080;Name=pepQ;gbkey=Gene;gene=pepQ;gene_biotype=pseudogene;locus_tag=J4731_14080;pseudo=true
JAGETS010000025.1	Protein Homology	CDS	114621	115910	.	+	0	ID=cds-J4731_14080;Parent=gene-J4731_14080;Note=frameshifted%3B internal stop;gbkey=CDS;gene=pepQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006709201.1;locus_tag=J4731_14080;product=Xaa-Pro dipeptidase;pseudo=true;transl_table=11
JAGETS010000025.1	Genbank	pseudogene	115910	116476	.	+	.	ID=gene-J4731_14085;Name=J4731_14085;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_14085;pseudo=true
JAGETS010000025.1	Protein Homology	CDS	115910	116476	.	+	0	ID=cds-J4731_14085;Parent=gene-J4731_14085;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008913871.1;locus_tag=J4731_14085;product=YigZ family protein;pseudo=true;transl_table=11
JAGETS010000025.1	Genbank	pseudogene	116560	117802	.	+	.	ID=gene-J4731_14090;Name=J4731_14090;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_14090;pseudo=true
JAGETS010000025.1	Protein Homology	CDS	116560	117802	.	+	0	ID=cds-J4731_14090;Parent=gene-J4731_14090;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004720468.1;locus_tag=J4731_14090;product=potassium transporter;pseudo=true;transl_table=11
##sequence-region JAGETS010000026.1 1 97158
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=587
JAGETS010000026.1	Genbank	region	1	97158	.	+	.	ID=JAGETS010000026.1:1..97158;Dbxref=taxon:587;collected-by=NHLS;collection-date=2018;country=South Africa: Pretoria;gbkey=Src;isolation-source=stool;lat-lon=25.7479 S 28.2293 E;mol_type=genomic DNA;nat-host=porcine;strain=SG003
JAGETS010000026.1	Genbank	pseudogene	3	535	.	-	.	ID=gene-J4731_14095;Name=pqiC;gbkey=Gene;gene=pqiC;gene_biotype=pseudogene;locus_tag=J4731_14095;pseudo=true
JAGETS010000026.1	Protein Homology	CDS	3	535	.	-	0	ID=cds-J4731_14095;Parent=gene-J4731_14095;Note=frameshifted;gbkey=CDS;gene=pqiC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006662140.1;locus_tag=J4731_14095;product=membrane integrity-associated transporter subunit PqiC;pseudo=true;transl_table=11
JAGETS010000026.1	Genbank	pseudogene	489	2176	.	-	.	ID=gene-J4731_14100;Name=pqiB;gbkey=Gene;gene=pqiB;gene_biotype=pseudogene;locus_tag=J4731_14100;pseudo=true
JAGETS010000026.1	Protein Homology	CDS	489	2176	.	-	0	ID=cds-J4731_14100;Parent=gene-J4731_14100;Note=frameshifted%3B internal stop;gbkey=CDS;gene=pqiB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006813552.1;locus_tag=J4731_14100;product=intermembrane transport protein PqiB;pseudo=true;transl_table=11
JAGETS010000026.1	Genbank	pseudogene	2195	3393	.	-	.	ID=gene-J4731_14105;Name=pqiA;gbkey=Gene;gene=pqiA;gene_biotype=pseudogene;locus_tag=J4731_14105;pseudo=true
JAGETS010000026.1	Protein Homology	CDS	2195	3393	.	-	0	ID=cds-J4731_14105;Parent=gene-J4731_14105;Note=frameshifted;gbkey=CDS;gene=pqiA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004856918.1;locus_tag=J4731_14105;product=membrane integrity-associated transporter subunit PqiA;pseudo=true;transl_table=11
JAGETS010000026.1	Genbank	pseudogene	3472	5356	.	-	.	ID=gene-J4731_14110;Name=J4731_14110;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_14110;pseudo=true
JAGETS010000026.1	Protein Homology	CDS	3472	5356	.	-	0	ID=cds-J4731_14110;Parent=gene-J4731_14110;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226158.1;locus_tag=J4731_14110;product=ABC transporter ATP-binding protein;pseudo=true;transl_table=11
JAGETS010000026.1	Genbank	pseudogene	5364	7312	.	-	.	ID=gene-J4731_14115;Name=rlmKL;gbkey=Gene;gene=rlmKL;gene_biotype=pseudogene;locus_tag=J4731_14115;pseudo=true
JAGETS010000026.1	Protein Homology	CDS	5364	7312	.	-	0	ID=cds-J4731_14115;Parent=gene-J4731_14115;Note=frameshifted;gbkey=CDS;gene=rlmKL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002354011.1;locus_tag=J4731_14115;product=bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL;pseudo=true;transl_table=11
JAGETS010000026.1	Genbank	pseudogene	7535	8641	.	+	.	ID=gene-J4731_14120;Name=J4731_14120;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_14120;pseudo=true
JAGETS010000026.1	Protein Homology	CDS	7535	8641	.	+	0	ID=cds-J4731_14120;Parent=gene-J4731_14120;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014657942.1;locus_tag=J4731_14120;product=YcbX family protein;pseudo=true;transl_table=11
JAGETS010000026.1	Genbank	pseudogene	8762	9304	.	-	.	ID=gene-J4731_14125;Name=J4731_14125;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_14125;pseudo=true
JAGETS010000026.1	Protein Homology	CDS	8762	9304	.	-	0	ID=cds-J4731_14125;Parent=gene-J4731_14125;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006657837.1;locus_tag=J4731_14125;product=cell division protein ZapC;pseudo=true;transl_table=11
JAGETS010000026.1	Genbank	pseudogene	9573	10576	.	-	.	ID=gene-J4731_14130;Name=pyrD;gbkey=Gene;gene=pyrD;gene_biotype=pseudogene;locus_tag=J4731_14130;pseudo=true
JAGETS010000026.1	Protein Homology	CDS	9573	10576	.	-	0	ID=cds-J4731_14130;Parent=gene-J4731_14130;Note=frameshifted%3B internal stop;gbkey=CDS;gene=pyrD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015840036.1;locus_tag=J4731_14130;product=quinone-dependent dihydroorotate dehydrogenase;pseudo=true;transl_table=11
JAGETS010000026.1	Genbank	pseudogene	10885	13469	.	-	.	ID=gene-J4731_14135;Name=pepN;gbkey=Gene;gene=pepN;gene_biotype=pseudogene;locus_tag=J4731_14135;pseudo=true
JAGETS010000026.1	Protein Homology	CDS	10885	13469	.	-	0	ID=cds-J4731_14135;Parent=gene-J4731_14135;Note=frameshifted%3B internal stop;gbkey=CDS;gene=pepN;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000193787.1;locus_tag=J4731_14135;product=aminopeptidase N;pseudo=true;transl_table=11
JAGETS010000026.1	Genbank	pseudogene	14010	15220	.	+	.	ID=gene-J4731_14140;Name=pncB;gbkey=Gene;gene=pncB;gene_biotype=pseudogene;locus_tag=J4731_14140;pseudo=true
JAGETS010000026.1	Protein Homology	CDS	14010	15220	.	+	0	ID=cds-J4731_14140;Parent=gene-J4731_14140;Note=frameshifted;gbkey=CDS;gene=pncB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014699712.1;locus_tag=J4731_14140;product=nicotinate phosphoribosyltransferase;pseudo=true;transl_table=11
JAGETS010000026.1	Genbank	pseudogene	15699	17090	.	+	.	ID=gene-J4731_14145;Name=asnS;gbkey=Gene;gene=asnS;gene_biotype=pseudogene;locus_tag=J4731_14145;pseudo=true
JAGETS010000026.1	Protein Homology	CDS	15699	17090	.	+	0	ID=cds-J4731_14145;Parent=gene-J4731_14145;Note=frameshifted;gbkey=CDS;gene=asnS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123540.1;locus_tag=J4731_14145;product=asparagine--tRNA ligase;pseudo=true;transl_table=11
JAGETS010000026.1	Genbank	pseudogene	17650	18722	.	+	.	ID=gene-J4731_14150;Name=J4731_14150;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_14150;pseudo=true
JAGETS010000026.1	Protein Homology	CDS	17650	18722	.	+	0	ID=cds-J4731_14150;Parent=gene-J4731_14150;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_119863615.1;locus_tag=J4731_14150;product=porin;pseudo=true;transl_table=11
JAGETS010000026.1	Genbank	pseudogene	19131	20290	.	+	.	ID=gene-J4731_14155;Name=J4731_14155;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_14155;pseudo=true
JAGETS010000026.1	Protein Homology	CDS	19131	20290	.	+	0	ID=cds-J4731_14155;Parent=gene-J4731_14155;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000462687.1;locus_tag=J4731_14155;product=aspartate/tyrosine/aromatic aminotransferase;pseudo=true;transl_table=11
JAGETS010000026.1	Genbank	gene	20419	20763	.	-	.	ID=gene-J4731_14160;Name=J4731_14160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_14160
JAGETS010000026.1	GeneMarkS-2+	CDS	20419	20763	.	-	0	ID=cds-MBO1929285.1;Parent=gene-J4731_14160;Dbxref=NCBI_GP:MBO1929285.1;Name=MBO1929285.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_14160;product=hypothetical protein;protein_id=MBO1929285.1;transl_table=11
JAGETS010000026.1	Genbank	gene	20817	21107	.	-	.	ID=gene-J4731_14165;Name=J4731_14165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_14165
JAGETS010000026.1	Protein Homology	CDS	20817	21107	.	-	0	ID=cds-MBO1929286.1;Parent=gene-J4731_14165;Dbxref=NCBI_GP:MBO1929286.1;Name=MBO1929286.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012573.1;locus_tag=J4731_14165;product=hypothetical protein;protein_id=MBO1929286.1;transl_table=11
JAGETS010000026.1	Genbank	gene	21302	21514	.	-	.	ID=gene-J4731_14170;Name=J4731_14170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_14170
JAGETS010000026.1	Protein Homology	CDS	21302	21514	.	-	0	ID=cds-MBO1929287.1;Parent=gene-J4731_14170;Dbxref=NCBI_GP:MBO1929287.1;Name=MBO1929287.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012573.1;locus_tag=J4731_14170;product=hypothetical protein;protein_id=MBO1929287.1;transl_table=11
JAGETS010000026.1	Genbank	gene	21496	21702	.	-	.	ID=gene-J4731_14175;Name=J4731_14175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_14175
JAGETS010000026.1	Protein Homology	CDS	21496	21702	.	-	0	ID=cds-MBO1929288.1;Parent=gene-J4731_14175;Dbxref=NCBI_GP:MBO1929288.1;Name=MBO1929288.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012573.1;locus_tag=J4731_14175;product=hypothetical protein;protein_id=MBO1929288.1;transl_table=11
JAGETS010000026.1	Genbank	gene	21738	21911	.	-	.	ID=gene-J4731_14180;Name=J4731_14180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_14180
JAGETS010000026.1	GeneMarkS-2+	CDS	21738	21911	.	-	0	ID=cds-MBO1929289.1;Parent=gene-J4731_14180;Dbxref=NCBI_GP:MBO1929289.1;Name=MBO1929289.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_14180;product=hypothetical protein;protein_id=MBO1929289.1;transl_table=11
JAGETS010000026.1	Genbank	gene	23955	24122	.	-	.	ID=gene-J4731_14185;Name=J4731_14185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_14185
JAGETS010000026.1	GeneMarkS-2+	CDS	23955	24122	.	-	0	ID=cds-MBO1929290.1;Parent=gene-J4731_14185;Dbxref=NCBI_GP:MBO1929290.1;Name=MBO1929290.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_14185;product=hypothetical protein;protein_id=MBO1929290.1;transl_table=11
JAGETS010000026.1	Genbank	gene	24990	25328	.	-	.	ID=gene-J4731_14190;Name=J4731_14190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_14190
JAGETS010000026.1	GeneMarkS-2+	CDS	24990	25328	.	-	0	ID=cds-MBO1929291.1;Parent=gene-J4731_14190;Dbxref=NCBI_GP:MBO1929291.1;Name=MBO1929291.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_14190;product=hypothetical protein;protein_id=MBO1929291.1;transl_table=11
JAGETS010000026.1	Genbank	gene	25431	25625	.	-	.	ID=gene-J4731_14195;Name=J4731_14195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_14195
JAGETS010000026.1	GeneMarkS-2+	CDS	25431	25625	.	-	0	ID=cds-MBO1929292.1;Parent=gene-J4731_14195;Dbxref=NCBI_GP:MBO1929292.1;Name=MBO1929292.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_14195;product=hypothetical protein;protein_id=MBO1929292.1;transl_table=11
JAGETS010000026.1	Genbank	gene	25622	25771	.	-	.	ID=gene-J4731_14200;Name=J4731_14200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_14200
JAGETS010000026.1	GeneMarkS-2+	CDS	25622	25771	.	-	0	ID=cds-MBO1929293.1;Parent=gene-J4731_14200;Dbxref=NCBI_GP:MBO1929293.1;Name=MBO1929293.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_14200;product=hypothetical protein;protein_id=MBO1929293.1;transl_table=11
JAGETS010000026.1	Genbank	gene	25986	26282	.	-	.	ID=gene-J4731_14205;Name=J4731_14205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_14205
JAGETS010000026.1	GeneMarkS-2+	CDS	25986	26282	.	-	0	ID=cds-MBO1929294.1;Parent=gene-J4731_14205;Dbxref=NCBI_GP:MBO1929294.1;Name=MBO1929294.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_14205;product=hypothetical protein;protein_id=MBO1929294.1;transl_table=11
JAGETS010000026.1	Genbank	gene	26724	26963	.	-	.	ID=gene-J4731_14210;Name=J4731_14210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_14210
JAGETS010000026.1	GeneMarkS-2+	CDS	26724	26963	.	-	0	ID=cds-MBO1929295.1;Parent=gene-J4731_14210;Dbxref=NCBI_GP:MBO1929295.1;Name=MBO1929295.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_14210;product=hypothetical protein;protein_id=MBO1929295.1;transl_table=11
JAGETS010000026.1	Genbank	gene	27035	27178	.	-	.	ID=gene-J4731_14215;Name=J4731_14215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_14215
JAGETS010000026.1	GeneMarkS-2+	CDS	27035	27178	.	-	0	ID=cds-MBO1929296.1;Parent=gene-J4731_14215;Dbxref=NCBI_GP:MBO1929296.1;Name=MBO1929296.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_14215;product=hypothetical protein;protein_id=MBO1929296.1;transl_table=11
JAGETS010000026.1	Genbank	gene	27231	27566	.	-	.	ID=gene-J4731_14220;Name=J4731_14220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_14220
JAGETS010000026.1	Protein Homology	CDS	27231	27566	.	-	0	ID=cds-MBO1929297.1;Parent=gene-J4731_14220;Dbxref=NCBI_GP:MBO1929297.1;Name=MBO1929297.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015462.1;locus_tag=J4731_14220;product=hypothetical protein;protein_id=MBO1929297.1;transl_table=11
JAGETS010000026.1	Genbank	pseudogene	27917	28558	.	-	.	ID=gene-J4731_14225;Name=J4731_14225;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_14225;pseudo=true
JAGETS010000026.1	Protein Homology	CDS	27917	28558	.	-	0	ID=cds-J4731_14225;Parent=gene-J4731_14225;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001109486.1;locus_tag=J4731_14225;product=MBL fold metallo-hydrolase;pseudo=true;transl_table=11
JAGETS010000026.1	Genbank	pseudogene	28596	29083	.	-	.	ID=gene-J4731_14230;Name=J4731_14230;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_14230;pseudo=true
JAGETS010000026.1	Protein Homology	CDS	28596	29083	.	-	0	ID=cds-J4731_14230;Parent=gene-J4731_14230;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006709657.1;locus_tag=J4731_14230;product=YcbK family protein;pseudo=true;transl_table=11
JAGETS010000026.1	Genbank	pseudogene	29508	31252	.	-	.	ID=gene-J4731_14235;Name=ldtD;gbkey=Gene;gene=ldtD;gene_biotype=pseudogene;locus_tag=J4731_14235;pseudo=true
JAGETS010000026.1	Protein Homology	CDS	29508	31252	.	-	0	ID=cds-J4731_14235;Parent=gene-J4731_14235;Note=frameshifted;gbkey=CDS;gene=ldtD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004256175.1;locus_tag=J4731_14235;product=L%2CD-transpeptidase;pseudo=true;transl_table=11
JAGETS010000026.1	Genbank	pseudogene	31645	36052	.	-	.	ID=gene-J4731_14240;Name=mukB;gbkey=Gene;gene=mukB;gene_biotype=pseudogene;locus_tag=J4731_14240;pseudo=true
JAGETS010000026.1	Protein Homology	CDS	31645	36052	.	-	0	ID=cds-J4731_14240;Parent=gene-J4731_14240;Note=frameshifted;gbkey=CDS;gene=mukB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004256184.1;locus_tag=J4731_14240;product=chromosome partition protein MukB;pseudo=true;transl_table=11
JAGETS010000026.1	Genbank	pseudogene	36131	36754	.	-	.	ID=gene-J4731_14245;Name=mukE;gbkey=Gene;gene=mukE;gene_biotype=pseudogene;locus_tag=J4731_14245;pseudo=true
JAGETS010000026.1	Protein Homology	CDS	36131	36754	.	-	0	ID=cds-J4731_14245;Parent=gene-J4731_14245;Note=frameshifted%3B internal stop;gbkey=CDS;gene=mukE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008102376.1;locus_tag=J4731_14245;product=chromosome partition protein MukE;pseudo=true;transl_table=11
JAGETS010000026.1	Genbank	pseudogene	36735	37972	.	-	.	ID=gene-J4731_14250;Name=mukF;gbkey=Gene;gene=mukF;gene_biotype=pseudogene;locus_tag=J4731_14250;pseudo=true
JAGETS010000026.1	Protein Homology	CDS	36735	37972	.	-	0	ID=cds-J4731_14250;Parent=gene-J4731_14250;Note=frameshifted%3B internal stop;gbkey=CDS;gene=mukF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004717388.1;locus_tag=J4731_14250;product=chromosome partition protein MukF;pseudo=true;transl_table=11
JAGETS010000026.1	Genbank	pseudogene	38019	38804	.	-	.	ID=gene-J4731_14255;Name=cmoM;gbkey=Gene;gene=cmoM;gene_biotype=pseudogene;locus_tag=J4731_14255;pseudo=true
JAGETS010000026.1	Protein Homology	CDS	38019	38804	.	-	0	ID=cds-J4731_14255;Parent=gene-J4731_14255;Note=frameshifted;gbkey=CDS;gene=cmoM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004256191.1;locus_tag=J4731_14255;product=tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM;pseudo=true;transl_table=11
JAGETS010000026.1	Genbank	pseudogene	39194	39978	.	+	.	ID=gene-J4731_14260;Name=elyC;gbkey=Gene;gene=elyC;gene_biotype=pseudogene;locus_tag=J4731_14260;pseudo=true
JAGETS010000026.1	Protein Homology	CDS	39194	39978	.	+	0	ID=cds-J4731_14260;Parent=gene-J4731_14260;Note=frameshifted;gbkey=CDS;gene=elyC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004235833.1;locus_tag=J4731_14260;product=envelope biogenesis factor ElyC;pseudo=true;transl_table=11
JAGETS010000026.1	Genbank	pseudogene	40015	40797	.	-	.	ID=gene-J4731_14265;Name=kdsB;gbkey=Gene;gene=kdsB;gene_biotype=pseudogene;locus_tag=J4731_14265;pseudo=true
JAGETS010000026.1	Protein Homology	CDS	40015	40797	.	-	0	ID=cds-J4731_14265;Parent=gene-J4731_14265;Note=frameshifted;gbkey=CDS;gene=kdsB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011145925.1;locus_tag=J4731_14265;product=3-deoxy-manno-octulosonate cytidylyltransferase;pseudo=true;transl_table=11
JAGETS010000026.1	Genbank	pseudogene	40803	40981	.	-	.	ID=gene-J4731_14270;Name=J4731_14270;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_14270;pseudo=true
JAGETS010000026.1	Protein Homology	CDS	40803	40981	.	-	0	ID=cds-J4731_14270;Parent=gene-J4731_14270;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004244593.1;locus_tag=J4731_14270;product=hypothetical protein;pseudo=true;transl_table=11
JAGETS010000026.1	Genbank	pseudogene	41120	41333	.	-	.	ID=gene-J4731_14275;Name=J4731_14275;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_14275;pseudo=true
JAGETS010000026.1	Protein Homology	CDS	41120	41333	.	-	0	ID=cds-J4731_14275;Parent=gene-J4731_14275;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006657814.1;locus_tag=J4731_14275;product=cold shock domain-containing protein;pseudo=true;transl_table=11
JAGETS010000026.1	Genbank	pseudogene	41778	42757	.	-	.	ID=gene-J4731_14280;Name=lpxK;gbkey=Gene;gene=lpxK;gene_biotype=pseudogene;locus_tag=J4731_14280;pseudo=true
JAGETS010000026.1	Protein Homology	CDS	41778	42757	.	-	0	ID=cds-J4731_14280;Parent=gene-J4731_14280;Note=frameshifted;gbkey=CDS;gene=lpxK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005170991.1;locus_tag=J4731_14280;product=tetraacyldisaccharide 4'-kinase;pseudo=true;transl_table=11
JAGETS010000026.1	Genbank	pseudogene	42714	44437	.	-	.	ID=gene-J4731_14285;Name=msbA;gbkey=Gene;gene=msbA;gene_biotype=pseudogene;locus_tag=J4731_14285;pseudo=true
JAGETS010000026.1	Protein Homology	CDS	42714	44437	.	-	0	ID=cds-J4731_14285;Parent=gene-J4731_14285;Note=frameshifted%3B internal stop;gbkey=CDS;gene=msbA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004918144.1;locus_tag=J4731_14285;product=lipid A ABC transporter ATP-binding protein/permease MsbA;pseudo=true;transl_table=11
JAGETS010000026.1	Genbank	pseudogene	44472	46754	.	-	.	ID=gene-J4731_14290;Name=J4731_14290;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_14290;pseudo=true
JAGETS010000026.1	Protein Homology	CDS	44472	46754	.	-	0	ID=cds-J4731_14290;Parent=gene-J4731_14290;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004918143.1;locus_tag=J4731_14290;product=DNA internalization-related competence protein ComEC/Rec2;pseudo=true;transl_table=11
JAGETS010000026.1	Genbank	gene	47022	47234	.	-	.	ID=gene-J4731_14295;Name=J4731_14295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_14295
JAGETS010000026.1	GeneMarkS-2+	CDS	47022	47234	.	-	0	ID=cds-MBO1929298.1;Parent=gene-J4731_14295;Dbxref=NCBI_GP:MBO1929298.1;Name=MBO1929298.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_14295;product=hypothetical protein;protein_id=MBO1929298.1;transl_table=11
JAGETS010000026.1	Genbank	pseudogene	47283	47527	.	-	.	ID=gene-J4731_14300;Name=ihfB;gbkey=Gene;gene=ihfB;gene_biotype=pseudogene;locus_tag=J4731_14300;pseudo=true
JAGETS010000026.1	Protein Homology	CDS	47283	47527	.	-	0	ID=cds-J4731_14300;Parent=gene-J4731_14300;Note=frameshifted;gbkey=CDS;gene=ihfB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309022.1;locus_tag=J4731_14300;product=integration host factor subunit beta;pseudo=true;transl_table=11
JAGETS010000026.1	Genbank	pseudogene	47570	49233	.	-	.	ID=gene-J4731_14305;Name=rpsA;gbkey=Gene;gene=rpsA;gene_biotype=pseudogene;locus_tag=J4731_14305;pseudo=true
JAGETS010000026.1	Protein Homology	CDS	47570	49233	.	-	0	ID=cds-J4731_14305;Parent=gene-J4731_14305;Note=frameshifted%3B internal stop;gbkey=CDS;gene=rpsA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123560.1;locus_tag=J4731_14305;product=30S ribosomal protein S1;pseudo=true;transl_table=11
JAGETS010000026.1	Genbank	pseudogene	49402	50053	.	-	.	ID=gene-J4731_14310;Name=cmk;gbkey=Gene;gene=cmk;gene_biotype=pseudogene;locus_tag=J4731_14310;pseudo=true
JAGETS010000026.1	Protein Homology	CDS	49402	50053	.	-	0	ID=cds-J4731_14310;Parent=gene-J4731_14310;Note=frameshifted%3B internal stop;gbkey=CDS;gene=cmk;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011094136.1;locus_tag=J4731_14310;product=(d)CMP kinase;pseudo=true;transl_table=11
JAGETS010000026.1	Genbank	pseudogene	50251	51514	.	-	.	ID=gene-J4731_14315;Name=aroA;gbkey=Gene;gene=aroA;gene_biotype=pseudogene;locus_tag=J4731_14315;pseudo=true
JAGETS010000026.1	Protein Homology	CDS	50251	51514	.	-	0	ID=cds-J4731_14315;Parent=gene-J4731_14315;Note=frameshifted%3B internal stop;gbkey=CDS;gene=aroA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004252010.1;locus_tag=J4731_14315;product=3-phosphoshikimate 1-carboxyvinyltransferase;pseudo=true;transl_table=11
JAGETS010000026.1	Genbank	pseudogene	51634	52717	.	-	.	ID=gene-J4731_14320;Name=serC;gbkey=Gene;gene=serC;gene_biotype=pseudogene;locus_tag=J4731_14320;pseudo=true
JAGETS010000026.1	Protein Homology	CDS	51634	52717	.	-	0	ID=cds-J4731_14320;Parent=gene-J4731_14320;Note=frameshifted;gbkey=CDS;gene=serC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004244582.1;locus_tag=J4731_14320;product=3-phosphoserine/phosphohydroxythreonine transaminase;pseudo=true;transl_table=11
JAGETS010000026.1	Genbank	pseudogene	53017	54618	.	-	.	ID=gene-J4731_14325;Name=pgm;gbkey=Gene;gene=pgm;gene_biotype=pseudogene;locus_tag=J4731_14325;pseudo=true
JAGETS010000026.1	Protein Homology	CDS	53017	54618	.	-	0	ID=cds-J4731_14325;Parent=gene-J4731_14325;Note=frameshifted;gbkey=CDS;gene=pgm;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415214.1;locus_tag=J4731_14325;product=alpha-D-glucose phosphate-specific phosphoglucomutase;pseudo=true;transl_table=11
JAGETS010000026.1	Genbank	pseudogene	54675	55217	.	-	.	ID=gene-J4731_14330;Name=seqA;gbkey=Gene;gene=seqA;gene_biotype=pseudogene;locus_tag=J4731_14330;pseudo=true
JAGETS010000026.1	Protein Homology	CDS	54675	55217	.	-	0	ID=cds-J4731_14330;Parent=gene-J4731_14330;Note=frameshifted;gbkey=CDS;gene=seqA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007900487.1;locus_tag=J4731_14330;product=replication initiation negative regulator SeqA;pseudo=true;transl_table=11
JAGETS010000026.1	Genbank	pseudogene	55539	56291	.	+	.	ID=gene-J4731_14335;Name=J4731_14335;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_14335;pseudo=true
JAGETS010000026.1	Protein Homology	CDS	55539	56291	.	+	0	ID=cds-J4731_14335;Parent=gene-J4731_14335;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014657927.1;locus_tag=J4731_14335;product=alpha/beta fold hydrolase;pseudo=true;transl_table=11
JAGETS010000026.1	Genbank	pseudogene	56551	58668	.	+	.	ID=gene-J4731_14340;Name=J4731_14340;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_14340;pseudo=true
JAGETS010000026.1	Protein Homology	CDS	56551	58668	.	+	0	ID=cds-J4731_14340;Parent=gene-J4731_14340;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004918130.1;locus_tag=J4731_14340;product=ATP-binding cassette domain-containing protein;pseudo=true;transl_table=11
JAGETS010000026.1	Genbank	pseudogene	58637	59956	.	+	.	ID=gene-J4731_14345;Name=J4731_14345;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_14345;pseudo=true
JAGETS010000026.1	Protein Homology	CDS	58637	59956	.	+	0	ID=cds-J4731_14345;Parent=gene-J4731_14345;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004256250.1;locus_tag=J4731_14345;product=HlyD family type I secretion periplasmic adaptor subunit;pseudo=true;transl_table=11
JAGETS010000026.1	Genbank	pseudogene	59960	62044	.	+	.	ID=gene-J4731_14350;Name=J4731_14350;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_14350;pseudo=true
JAGETS010000026.1	Protein Homology	CDS	59960	62044	.	+	0	ID=cds-J4731_14350;Parent=gene-J4731_14350;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004256252.1;locus_tag=J4731_14350;product=type I secretion system permease/ATPase;pseudo=true;transl_table=11
JAGETS010000026.1	Genbank	pseudogene	62211	62505	.	+	.	ID=gene-J4731_14355;Name=ybfE;gbkey=Gene;gene=ybfE;gene_biotype=pseudogene;locus_tag=J4731_14355;pseudo=true
JAGETS010000026.1	Protein Homology	CDS	62211	62505	.	+	0	ID=cds-J4731_14355;Parent=gene-J4731_14355;Note=frameshifted;gbkey=CDS;gene=ybfE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004256256.1;locus_tag=J4731_14355;product=LexA regulated protein;pseudo=true;transl_table=11
JAGETS010000026.1	Genbank	gene	62718	63185	.	+	.	ID=gene-J4731_14360;Name=fldA;gbkey=Gene;gene=fldA;gene_biotype=protein_coding;locus_tag=J4731_14360
JAGETS010000026.1	Protein Homology	CDS	62718	63185	.	+	0	ID=cds-MBO1929299.1;Parent=gene-J4731_14360;Dbxref=NCBI_GP:MBO1929299.1;Name=MBO1929299.1;gbkey=CDS;gene=fldA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002215386.1;locus_tag=J4731_14360;product=flavodoxin FldA;protein_id=MBO1929299.1;transl_table=11
JAGETS010000026.1	Genbank	gene	63424	63810	.	+	.	ID=gene-J4731_14365;Name=fur;gbkey=Gene;gene=fur;gene_biotype=protein_coding;locus_tag=J4731_14365
JAGETS010000026.1	Protein Homology	CDS	63424	63810	.	+	0	ID=cds-MBO1929300.1;Parent=gene-J4731_14365;Dbxref=NCBI_GP:MBO1929300.1;Name=MBO1929300.1;gbkey=CDS;gene=fur;inference=COORDINATES: protein motif:HMM:NF006999.0;locus_tag=J4731_14365;product=ferric iron uptake transcriptional regulator;protein_id=MBO1929300.1;transl_table=11
JAGETS010000026.1	Genbank	pseudogene	64359	65061	.	+	.	ID=gene-J4731_14370;Name=J4731_14370;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_14370;pseudo=true
JAGETS010000026.1	Protein Homology	CDS	64359	65061	.	+	0	ID=cds-J4731_14370;Parent=gene-J4731_14370;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006813596.1;locus_tag=J4731_14370;product=polymer-forming cytoskeletal protein;pseudo=true;transl_table=11
JAGETS010000026.1	Genbank	pseudogene	65237	66626	.	-	.	ID=gene-J4731_14375;Name=J4731_14375;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_14375;pseudo=true
JAGETS010000026.1	Protein Homology	CDS	65237	66626	.	-	0	ID=cds-J4731_14375;Parent=gene-J4731_14375;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004918116.1;locus_tag=J4731_14375;product=OprD family outer membrane porin;pseudo=true;transl_table=11
JAGETS010000026.1	Genbank	pseudogene	67138	68194	.	-	.	ID=gene-J4731_14380;Name=ansB;gbkey=Gene;gene=ansB;gene_biotype=pseudogene;locus_tag=J4731_14380;pseudo=true
JAGETS010000026.1	Protein Homology	CDS	67138	68194	.	-	0	ID=cds-J4731_14380;Parent=gene-J4731_14380;Note=frameshifted;gbkey=CDS;gene=ansB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006657793.1;locus_tag=J4731_14380;product=L-asparaginase 2;pseudo=true;transl_table=11
JAGETS010000026.1	Genbank	pseudogene	68374	70097	.	+	.	ID=gene-J4731_14385;Name=J4731_14385;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_14385;pseudo=true
JAGETS010000026.1	Protein Homology	CDS	68374	70097	.	+	0	ID=cds-J4731_14385;Parent=gene-J4731_14385;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006813598.1;locus_tag=J4731_14385;product=YcaO-like family protein;pseudo=true;transl_table=11
JAGETS010000026.1	Genbank	pseudogene	70165	70636	.	-	.	ID=gene-J4731_14390;Name=J4731_14390;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_14390;pseudo=true
JAGETS010000026.1	Protein Homology	CDS	70165	70636	.	-	0	ID=cds-J4731_14390;Parent=gene-J4731_14390;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001344072.1;locus_tag=J4731_14390;product=UxaA family hydrolase;pseudo=true;transl_table=11
JAGETS010000026.1	Genbank	pseudogene	70682	71725	.	-	.	ID=gene-J4731_14395;Name=J4731_14395;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_14395;pseudo=true
JAGETS010000026.1	Protein Homology	CDS	70682	71725	.	-	0	ID=cds-J4731_14395;Parent=gene-J4731_14395;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001344071.1;locus_tag=J4731_14395;product=UxaA family hydrolase;pseudo=true;transl_table=11
JAGETS010000026.1	Genbank	gene	71762	71998	.	-	.	ID=gene-J4731_14400;Name=J4731_14400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_14400
JAGETS010000026.1	GeneMarkS-2+	CDS	71762	71998	.	-	0	ID=cds-MBO1929301.1;Parent=gene-J4731_14400;Dbxref=NCBI_GP:MBO1929301.1;Name=MBO1929301.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_14400;product=hypothetical protein;protein_id=MBO1929301.1;transl_table=11
JAGETS010000026.1	Genbank	gene	72032	72172	.	-	.	ID=gene-J4731_14405;Name=J4731_14405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_14405
JAGETS010000026.1	GeneMarkS-2+	CDS	72032	72172	.	-	0	ID=cds-MBO1929302.1;Parent=gene-J4731_14405;Dbxref=NCBI_GP:MBO1929302.1;Name=MBO1929302.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_14405;product=hypothetical protein;protein_id=MBO1929302.1;transl_table=11
JAGETS010000026.1	Genbank	gene	72271	72978	.	-	.	ID=gene-J4731_14410;Name=J4731_14410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_14410
JAGETS010000026.1	Protein Homology	CDS	72271	72978	.	-	0	ID=cds-MBO1929303.1;Parent=gene-J4731_14410;Dbxref=NCBI_GP:MBO1929303.1;Name=MBO1929303.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019310.1;locus_tag=J4731_14410;product=MFS transporter;protein_id=MBO1929303.1;transl_table=11
JAGETS010000026.1	Genbank	pseudogene	73106	73992	.	-	.	ID=gene-J4731_14415;Name=J4731_14415;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_14415;pseudo=true
JAGETS010000026.1	Protein Homology	CDS	73106	73992	.	-	0	ID=cds-J4731_14415;Parent=gene-J4731_14415;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004106528.1;locus_tag=J4731_14415;product=dihydrodipicolinate synthase family protein;pseudo=true;transl_table=11
JAGETS010000026.1	Genbank	pseudogene	74337	75108	.	+	.	ID=gene-J4731_14420;Name=J4731_14420;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_14420;pseudo=true
JAGETS010000026.1	Protein Homology	CDS	74337	75108	.	+	0	ID=cds-J4731_14420;Parent=gene-J4731_14420;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004256297.1;locus_tag=J4731_14420;product=IclR family transcriptional regulator;pseudo=true;transl_table=11
JAGETS010000026.1	Genbank	pseudogene	75607	76419	.	+	.	ID=gene-J4731_14425;Name=focA;gbkey=Gene;gene=focA;gene_biotype=pseudogene;locus_tag=J4731_14425;pseudo=true
JAGETS010000026.1	Protein Homology	CDS	75607	76419	.	+	0	ID=cds-J4731_14425;Parent=gene-J4731_14425;Note=frameshifted;gbkey=CDS;gene=focA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004235816.1;locus_tag=J4731_14425;product=formate transporter FocA;pseudo=true;transl_table=11
JAGETS010000026.1	Genbank	pseudogene	76490	78755	.	+	.	ID=gene-J4731_14430;Name=pflB;gbkey=Gene;gene=pflB;gene_biotype=pseudogene;locus_tag=J4731_14430;pseudo=true
JAGETS010000026.1	Protein Homology	CDS	76490	78755	.	+	0	ID=cds-J4731_14430;Parent=gene-J4731_14430;Note=frameshifted;gbkey=CDS;gene=pflB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459948.1;locus_tag=J4731_14430;product=formate C-acetyltransferase;pseudo=true;transl_table=11
JAGETS010000026.1	Genbank	pseudogene	79085	79836	.	+	.	ID=gene-J4731_14435;Name=pflA;gbkey=Gene;gene=pflA;gene_biotype=pseudogene;locus_tag=J4731_14435;pseudo=true
JAGETS010000026.1	Protein Homology	CDS	79085	79836	.	+	0	ID=cds-J4731_14435;Parent=gene-J4731_14435;Note=frameshifted;gbkey=CDS;gene=pflA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211334.1;locus_tag=J4731_14435;product=pyruvate formate lyase 1-activating protein;pseudo=true;transl_table=11
JAGETS010000026.1	Genbank	pseudogene	79882	80295	.	-	.	ID=gene-J4731_14440;Name=J4731_14440;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_14440;pseudo=true
JAGETS010000026.1	Protein Homology	CDS	79882	80295	.	-	0	ID=cds-J4731_14440;Parent=gene-J4731_14440;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004256305.1;locus_tag=J4731_14440;product=DUF2000 domain-containing protein;pseudo=true;transl_table=11
JAGETS010000026.1	Genbank	pseudogene	80527	80909	.	+	.	ID=gene-J4731_14445;Name=J4731_14445;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_14445;pseudo=true
JAGETS010000026.1	Protein Homology	CDS	80527	80909	.	+	0	ID=cds-J4731_14445;Parent=gene-J4731_14445;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004385496.1;locus_tag=J4731_14445;product=Lrp/AsnC family transcriptional regulator;pseudo=true;transl_table=11
JAGETS010000026.1	Genbank	pseudogene	81237	82035	.	+	.	ID=gene-J4731_14450;Name=J4731_14450;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_14450;pseudo=true
JAGETS010000026.1	Protein Homology	CDS	81237	82035	.	+	0	ID=cds-J4731_14450;Parent=gene-J4731_14450;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004256309.1;locus_tag=J4731_14450;product=hypothetical protein;pseudo=true;transl_table=11
JAGETS010000026.1	Genbank	pseudogene	82185	83047	.	+	.	ID=gene-J4731_14455;Name=J4731_14455;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_14455;pseudo=true
JAGETS010000026.1	Protein Homology	CDS	82185	83047	.	+	0	ID=cds-J4731_14455;Parent=gene-J4731_14455;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015854770.1;locus_tag=J4731_14455;product=LysR family transcriptional regulator;pseudo=true;transl_table=11
JAGETS010000026.1	Genbank	pseudogene	83056	83776	.	-	.	ID=gene-J4731_14460;Name=J4731_14460;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_14460;pseudo=true
JAGETS010000026.1	Protein Homology	CDS	83056	83776	.	-	0	ID=cds-J4731_14460;Parent=gene-J4731_14460;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004256324.1;locus_tag=J4731_14460;product=sulfite exporter TauE/SafE family protein;pseudo=true;transl_table=11
JAGETS010000026.1	Genbank	pseudogene	83978	85235	.	-	.	ID=gene-J4731_14465;Name=serS;gbkey=Gene;gene=serS;gene_biotype=pseudogene;locus_tag=J4731_14465;pseudo=true
JAGETS010000026.1	Protein Homology	CDS	83978	85235	.	-	0	ID=cds-J4731_14465;Parent=gene-J4731_14465;Note=frameshifted;gbkey=CDS;gene=serS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000884181.1;locus_tag=J4731_14465;product=serine--tRNA ligase;pseudo=true;transl_table=11
JAGETS010000026.1	Genbank	pseudogene	85343	86669	.	-	.	ID=gene-J4731_14470;Name=J4731_14470;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_14470;pseudo=true
JAGETS010000026.1	Protein Homology	CDS	85343	86669	.	-	0	ID=cds-J4731_14470;Parent=gene-J4731_14470;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123573.1;locus_tag=J4731_14470;product=replication-associated recombination protein A;pseudo=true;transl_table=11
JAGETS010000026.1	Genbank	pseudogene	86756	87365	.	-	.	ID=gene-J4731_14475;Name=lolA;gbkey=Gene;gene=lolA;gene_biotype=pseudogene;locus_tag=J4731_14475;pseudo=true
JAGETS010000026.1	Protein Homology	CDS	86756	87365	.	-	0	ID=cds-J4731_14475;Parent=gene-J4731_14475;Note=frameshifted;gbkey=CDS;gene=lolA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013317704.1;locus_tag=J4731_14475;product=outer membrane lipoprotein chaperone LolA;pseudo=true;transl_table=11
JAGETS010000026.1	Genbank	pseudogene	87462	88095	.	-	.	ID=gene-J4731_14480;Name=J4731_14480;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_14480;pseudo=true
JAGETS010000026.1	Protein Homology	CDS	87462	88095	.	-	0	ID=cds-J4731_14480;Parent=gene-J4731_14480;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001430754.1;locus_tag=J4731_14480;product=hypothetical protein;pseudo=true;transl_table=11
JAGETS010000026.1	Genbank	gene	88071	88499	.	-	.	ID=gene-J4731_14485;Name=J4731_14485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_14485
JAGETS010000026.1	Protein Homology	CDS	88071	88499	.	-	0	ID=cds-MBO1929304.1;Parent=gene-J4731_14485;Dbxref=NCBI_GP:MBO1929304.1;Name=MBO1929304.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013727.1;locus_tag=J4731_14485;product=hypothetical protein;protein_id=MBO1929304.1;transl_table=11
JAGETS010000026.1	Genbank	gene	88459	88803	.	-	.	ID=gene-J4731_14490;Name=J4731_14490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_14490
JAGETS010000026.1	Protein Homology	CDS	88459	88803	.	-	0	ID=cds-MBO1929305.1;Parent=gene-J4731_14490;Dbxref=NCBI_GP:MBO1929305.1;Name=MBO1929305.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF036827.1;locus_tag=J4731_14490;product=hypothetical protein;protein_id=MBO1929305.1;transl_table=11
JAGETS010000026.1	Genbank	gene	88769	89383	.	-	.	ID=gene-J4731_14495;Name=J4731_14495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_14495
JAGETS010000026.1	GeneMarkS-2+	CDS	88769	89383	.	-	0	ID=cds-MBO1929306.1;Parent=gene-J4731_14495;Dbxref=NCBI_GP:MBO1929306.1;Name=MBO1929306.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_14495;product=hypothetical protein;protein_id=MBO1929306.1;transl_table=11
JAGETS010000026.1	Genbank	gene	89317	89823	.	-	.	ID=gene-J4731_14500;Name=J4731_14500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_14500
JAGETS010000026.1	GeneMarkS-2+	CDS	89317	89823	.	-	0	ID=cds-MBO1929307.1;Parent=gene-J4731_14500;Dbxref=NCBI_GP:MBO1929307.1;Name=MBO1929307.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_14500;product=hypothetical protein;protein_id=MBO1929307.1;transl_table=11
JAGETS010000026.1	Genbank	pseudogene	90177	91108	.	-	.	ID=gene-J4731_14505;Name=J4731_14505;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_14505;pseudo=true
JAGETS010000026.1	Protein Homology	CDS	90177	91108	.	-	0	ID=cds-J4731_14505;Parent=gene-J4731_14505;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004918091.1;locus_tag=J4731_14505;product=DNA translocase FtsK 4TM domain-containing protein;pseudo=true;transl_table=11
JAGETS010000026.1	Genbank	pseudogene	91525	91977	.	-	.	ID=gene-J4731_14510;Name=lrp;gbkey=Gene;gene=lrp;gene_biotype=pseudogene;locus_tag=J4731_14510;pseudo=true
JAGETS010000026.1	Protein Homology	CDS	91525	91977	.	-	0	ID=cds-J4731_14510;Parent=gene-J4731_14510;Note=frameshifted;gbkey=CDS;gene=lrp;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003096535.1;locus_tag=J4731_14510;product=leucine-responsive transcriptional regulator Lrp;pseudo=true;transl_table=11
JAGETS010000026.1	Genbank	pseudogene	92549	93501	.	+	.	ID=gene-J4731_14515;Name=trxB;gbkey=Gene;gene=trxB;gene_biotype=pseudogene;locus_tag=J4731_14515;pseudo=true
JAGETS010000026.1	Protein Homology	CDS	92549	93501	.	+	0	ID=cds-J4731_14515;Parent=gene-J4731_14515;Note=frameshifted;gbkey=CDS;gene=trxB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459934.1;locus_tag=J4731_14515;product=thioredoxin-disulfide reductase;pseudo=true;transl_table=11
JAGETS010000026.1	Genbank	pseudogene	93678	95341	.	+	.	ID=gene-J4731_14520;Name=J4731_14520;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_14520;pseudo=true
JAGETS010000026.1	Protein Homology	CDS	93678	95341	.	+	0	ID=cds-J4731_14520;Parent=gene-J4731_14520;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006813610.1;locus_tag=J4731_14520;product=DUF4153 domain-containing protein;pseudo=true;transl_table=11
JAGETS010000026.1	Genbank	pseudogene	95753	97152	.	+	.	ID=gene-J4731_14525;Name=J4731_14525;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_14525;pseudo=true
JAGETS010000026.1	Protein Homology	CDS	95753	97152	.	+	0	ID=cds-J4731_14525;Parent=gene-J4731_14525;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011816031.1;locus_tag=J4731_14525;product=ATP-binding cassette domain-containing protein;pseudo=true;transl_table=11
##sequence-region JAGETS010000027.1 1 53709
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=587
JAGETS010000027.1	Genbank	region	1	53709	.	+	.	ID=JAGETS010000027.1:1..53709;Dbxref=taxon:587;collected-by=NHLS;collection-date=2018;country=South Africa: Pretoria;gbkey=Src;isolation-source=stool;lat-lon=25.7479 S 28.2293 E;mol_type=genomic DNA;nat-host=porcine;strain=SG003
JAGETS010000027.1	Genbank	pseudogene	1	1784	.	+	.	ID=gene-J4731_14530;Name=prlC;gbkey=Gene;gene=prlC;gene_biotype=pseudogene;locus_tag=J4731_14530;pseudo=true
JAGETS010000027.1	Protein Homology	CDS	1	1784	.	+	1	ID=cds-J4731_14530;Parent=gene-J4731_14530;Note=frameshifted%3B internal stop%3B incomplete%3B missing N-terminus;gbkey=CDS;gene=prlC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004089321.1;locus_tag=J4731_14530;product=oligopeptidase A;pseudo=true;transl_table=11
JAGETS010000027.1	Genbank	pseudogene	1880	2470	.	+	.	ID=gene-J4731_14535;Name=J4731_14535;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_14535;pseudo=true
JAGETS010000027.1	Protein Homology	CDS	1880	2470	.	+	0	ID=cds-J4731_14535;Parent=gene-J4731_14535;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014604807.1;locus_tag=J4731_14535;product=class I SAM-dependent methyltransferase;pseudo=true;transl_table=11
JAGETS010000027.1	Genbank	pseudogene	2553	3876	.	-	.	ID=gene-J4731_14540;Name=gdhA;gbkey=Gene;gene=gdhA;gene_biotype=pseudogene;locus_tag=J4731_14540;pseudo=true
JAGETS010000027.1	Protein Homology	CDS	2553	3876	.	-	0	ID=cds-J4731_14540;Parent=gene-J4731_14540;Note=frameshifted%3B internal stop;gbkey=CDS;gene=gdhA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012147366.1;locus_tag=J4731_14540;product=NADP-specific glutamate dehydrogenase;pseudo=true;transl_table=11
JAGETS010000027.1	Genbank	pseudogene	4136	4569	.	-	.	ID=gene-J4731_14545;Name=uspA;gbkey=Gene;gene=uspA;gene_biotype=pseudogene;locus_tag=J4731_14545;pseudo=true
JAGETS010000027.1	Protein Homology	CDS	4136	4569	.	-	0	ID=cds-J4731_14545;Parent=gene-J4731_14545;Note=frameshifted;gbkey=CDS;gene=uspA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312394.1;locus_tag=J4731_14545;product=universal stress protein UspA;pseudo=true;transl_table=11
JAGETS010000027.1	Genbank	pseudogene	5019	5352	.	+	.	ID=gene-J4731_14550;Name=uspB;gbkey=Gene;gene=uspB;gene_biotype=pseudogene;locus_tag=J4731_14550;pseudo=true
JAGETS010000027.1	Protein Homology	CDS	5019	5352	.	+	0	ID=cds-J4731_14550;Parent=gene-J4731_14550;Note=frameshifted;gbkey=CDS;gene=uspB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004263154.1;locus_tag=J4731_14550;product=universal stress protein UspB;pseudo=true;transl_table=11
JAGETS010000027.1	Genbank	pseudogene	5483	6966	.	-	.	ID=gene-J4731_14555;Name=pitA;gbkey=Gene;gene=pitA;gene_biotype=pseudogene;locus_tag=J4731_14555;pseudo=true
JAGETS010000027.1	Protein Homology	CDS	5483	6966	.	-	0	ID=cds-J4731_14555;Parent=gene-J4731_14555;Note=frameshifted;gbkey=CDS;gene=pitA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011193267.1;locus_tag=J4731_14555;product=inorganic phosphate transporter PitA;pseudo=true;transl_table=11
JAGETS010000027.1	Genbank	pseudogene	7338	8545	.	+	.	ID=gene-J4731_14560;Name=J4731_14560;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_14560;pseudo=true
JAGETS010000027.1	Protein Homology	CDS	7338	8545	.	+	0	ID=cds-J4731_14560;Parent=gene-J4731_14560;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005968216.1;locus_tag=J4731_14560;product=NAD(P)/FAD-dependent oxidoreductase;pseudo=true;transl_table=11
JAGETS010000027.1	Genbank	pseudogene	9004	9701	.	+	.	ID=gene-J4731_14565;Name=J4731_14565;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_14565;pseudo=true
JAGETS010000027.1	Protein Homology	CDS	9004	9701	.	+	0	ID=cds-J4731_14565;Parent=gene-J4731_14565;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006663505.1;locus_tag=J4731_14565;product=pirin family protein;pseudo=true;transl_table=11
JAGETS010000027.1	Genbank	pseudogene	9767	11378	.	-	.	ID=gene-J4731_14570;Name=pckA;gbkey=Gene;gene=pckA;gene_biotype=pseudogene;locus_tag=J4731_14570;pseudo=true
JAGETS010000027.1	Protein Homology	CDS	9767	11378	.	-	0	ID=cds-J4731_14570;Parent=gene-J4731_14570;Note=frameshifted;gbkey=CDS;gene=pckA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002394031.1;locus_tag=J4731_14570;product=phosphoenolpyruvate carboxykinase (ATP);pseudo=true;transl_table=11
JAGETS010000027.1	Genbank	pseudogene	11552	12388	.	-	.	ID=gene-J4731_14575;Name=hslO;gbkey=Gene;gene=hslO;gene_biotype=pseudogene;locus_tag=J4731_14575;pseudo=true
JAGETS010000027.1	Protein Homology	CDS	11552	12388	.	-	0	ID=cds-J4731_14575;Parent=gene-J4731_14575;Note=frameshifted;gbkey=CDS;gene=hslO;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011095578.1;locus_tag=J4731_14575;product=Hsp33 family molecular chaperone HslO;pseudo=true;transl_table=11
JAGETS010000027.1	Genbank	gene	12485	12895	.	-	.	ID=gene-J4731_14580;Name=hslR;gbkey=Gene;gene=hslR;gene_biotype=protein_coding;locus_tag=J4731_14580
JAGETS010000027.1	Protein Homology	CDS	12485	12895	.	-	0	ID=cds-MBO1929308.1;Parent=gene-J4731_14580;Dbxref=NCBI_GP:MBO1929308.1;Name=MBO1929308.1;gbkey=CDS;gene=hslR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006813989.1;locus_tag=J4731_14580;product=ribosome-associated heat shock protein Hsp15;protein_id=MBO1929308.1;transl_table=11
JAGETS010000027.1	Genbank	pseudogene	12926	15042	.	-	.	ID=gene-J4731_14585;Name=J4731_14585;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_14585;pseudo=true
JAGETS010000027.1	Protein Homology	CDS	12926	15042	.	-	0	ID=cds-J4731_14585;Parent=gene-J4731_14585;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006813990.1;locus_tag=J4731_14585;product=intracellular growth attenuator family protein;pseudo=true;transl_table=11
JAGETS010000027.1	Genbank	pseudogene	15415	15913	.	+	.	ID=gene-J4731_14590;Name=nudE;gbkey=Gene;gene=nudE;gene_biotype=pseudogene;locus_tag=J4731_14590;pseudo=true
JAGETS010000027.1	Protein Homology	CDS	15415	15913	.	+	0	ID=cds-J4731_14590;Parent=gene-J4731_14590;Note=frameshifted;gbkey=CDS;gene=nudE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006534397.1;locus_tag=J4731_14590;product=ADP compounds hydrolase NudE;pseudo=true;transl_table=11
JAGETS010000027.1	Genbank	pseudogene	16070	18504	.	-	.	ID=gene-J4731_14595;Name=mrcA;gbkey=Gene;gene=mrcA;gene_biotype=pseudogene;locus_tag=J4731_14595;pseudo=true
JAGETS010000027.1	Protein Homology	CDS	16070	18504	.	-	0	ID=cds-J4731_14595;Parent=gene-J4731_14595;Note=frameshifted;gbkey=CDS;gene=mrcA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009654857.1;locus_tag=J4731_14595;product=peptidoglycan glycosyltransferase/peptidoglycan DD-transpeptidase MrcA;pseudo=true;transl_table=11
JAGETS010000027.1	Genbank	pseudogene	18689	19516	.	+	.	ID=gene-J4731_14600;Name=J4731_14600;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_14600;pseudo=true
JAGETS010000027.1	Protein Homology	CDS	18689	19516	.	+	0	ID=cds-J4731_14600;Parent=gene-J4731_14600;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006813993.1;locus_tag=J4731_14600;product=pilus assembly protein HofM;pseudo=true;transl_table=11
JAGETS010000027.1	Genbank	gene	19874	20047	.	+	.	ID=gene-J4731_14605;Name=J4731_14605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_14605
JAGETS010000027.1	Protein Homology	CDS	19874	20047	.	+	0	ID=cds-MBO1929309.1;Parent=gene-J4731_14605;Dbxref=NCBI_GP:MBO1929309.1;Name=MBO1929309.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016992.1;locus_tag=J4731_14605;product=hypothetical protein;protein_id=MBO1929309.1;transl_table=11
JAGETS010000027.1	Genbank	pseudogene	20679	21633	.	+	.	ID=gene-J4731_14610;Name=J4731_14610;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_14610;pseudo=true
JAGETS010000027.1	Protein Homology	CDS	20679	21633	.	+	0	ID=cds-J4731_14610;Parent=gene-J4731_14610;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006657435.1;locus_tag=J4731_14610;product=transporter;pseudo=true;transl_table=11
JAGETS010000027.1	Genbank	pseudogene	22136	22651	.	+	.	ID=gene-J4731_14615;Name=aroK;gbkey=Gene;gene=aroK;gene_biotype=pseudogene;locus_tag=J4731_14615;pseudo=true
JAGETS010000027.1	Protein Homology	CDS	22136	22651	.	+	0	ID=cds-J4731_14615;Parent=gene-J4731_14615;Note=frameshifted;gbkey=CDS;gene=aroK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004709337.1;locus_tag=J4731_14615;product=shikimate kinase AroK;pseudo=true;transl_table=11
JAGETS010000027.1	Genbank	pseudogene	22666	23778	.	+	.	ID=gene-J4731_14620;Name=aroB;gbkey=Gene;gene=aroB;gene_biotype=pseudogene;locus_tag=J4731_14620;pseudo=true
JAGETS010000027.1	Protein Homology	CDS	22666	23778	.	+	0	ID=cds-J4731_14620;Parent=gene-J4731_14620;Note=frameshifted;gbkey=CDS;gene=aroB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017827154.1;locus_tag=J4731_14620;product=3-dehydroquinate synthase;pseudo=true;transl_table=11
JAGETS010000027.1	Genbank	pseudogene	24040	24938	.	+	.	ID=gene-J4731_14625;Name=J4731_14625;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_14625;pseudo=true
JAGETS010000027.1	Protein Homology	CDS	24040	24938	.	+	0	ID=cds-J4731_14625;Parent=gene-J4731_14625;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011906131.1;locus_tag=J4731_14625;product=SPOR domain-containing protein;pseudo=true;transl_table=11
JAGETS010000027.1	Genbank	pseudogene	25106	25826	.	+	.	ID=gene-J4731_14630;Name=J4731_14630;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_14630;pseudo=true
JAGETS010000027.1	Protein Homology	CDS	25106	25826	.	+	0	ID=cds-J4731_14630;Parent=gene-J4731_14630;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015962195.1;locus_tag=J4731_14630;product=Dam family site-specific DNA-(adenine-N6)-methyltransferase;pseudo=true;transl_table=11
JAGETS010000027.1	Genbank	pseudogene	25920	26592	.	+	.	ID=gene-J4731_14635;Name=rpe;gbkey=Gene;gene=rpe;gene_biotype=pseudogene;locus_tag=J4731_14635;pseudo=true
JAGETS010000027.1	Protein Homology	CDS	25920	26592	.	+	0	ID=cds-J4731_14635;Parent=gene-J4731_14635;Note=frameshifted;gbkey=CDS;gene=rpe;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004916064.1;locus_tag=J4731_14635;product=ribulose-phosphate 3-epimerase;pseudo=true;transl_table=11
JAGETS010000027.1	Genbank	pseudogene	26589	27275	.	+	.	ID=gene-J4731_14640;Name=J4731_14640;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_14640;pseudo=true
JAGETS010000027.1	Protein Homology	CDS	26589	27275	.	+	0	ID=cds-J4731_14640;Parent=gene-J4731_14640;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004916066.1;locus_tag=J4731_14640;product=phosphoglycolate phosphatase;pseudo=true;transl_table=11
JAGETS010000027.1	Genbank	pseudogene	27305	28327	.	+	.	ID=gene-J4731_14645;Name=trpS;gbkey=Gene;gene=trpS;gene_biotype=pseudogene;locus_tag=J4731_14645;pseudo=true
JAGETS010000027.1	Protein Homology	CDS	27305	28327	.	+	0	ID=cds-J4731_14645;Parent=gene-J4731_14645;Note=internal stop;gbkey=CDS;gene=trpS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004951301.1;locus_tag=J4731_14645;product=tryptophan--tRNA ligase;pseudo=true;transl_table=11
JAGETS010000027.1	Genbank	pseudogene	28420	29093	.	-	.	ID=gene-J4731_14650;Name=J4731_14650;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_14650;pseudo=true
JAGETS010000027.1	Protein Homology	CDS	28420	29093	.	-	0	ID=cds-J4731_14650;Parent=gene-J4731_14650;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226229.1;locus_tag=J4731_14650;product=hydrolase;pseudo=true;transl_table=11
JAGETS010000027.1	Genbank	pseudogene	29359	30224	.	+	.	ID=gene-J4731_14655;Name=J4731_14655;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_14655;pseudo=true
JAGETS010000027.1	Protein Homology	CDS	29359	30224	.	+	0	ID=cds-J4731_14655;Parent=gene-J4731_14655;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211685.1;locus_tag=J4731_14655;product=pirin family protein;pseudo=true;transl_table=11
JAGETS010000027.1	Genbank	pseudogene	30264	31166	.	-	.	ID=gene-J4731_14660;Name=J4731_14660;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_14660;pseudo=true
JAGETS010000027.1	Protein Homology	CDS	30264	31166	.	-	0	ID=cds-J4731_14660;Parent=gene-J4731_14660;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004248666.1;locus_tag=J4731_14660;product=LysR family transcriptional regulator;pseudo=true;transl_table=11
JAGETS010000027.1	Genbank	pseudogene	31351	33016	.	+	.	ID=gene-J4731_14665;Name=J4731_14665;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_14665;pseudo=true
JAGETS010000027.1	Protein Homology	CDS	31351	33016	.	+	0	ID=cds-J4731_14665;Parent=gene-J4731_14665;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014657129.1;locus_tag=J4731_14665;product=ABC transporter ATP-binding protein;pseudo=true;transl_table=11
JAGETS010000027.1	Genbank	gene	33009	33521	.	+	.	ID=gene-J4731_14670;Name=J4731_14670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_14670
JAGETS010000027.1	GeneMarkS-2+	CDS	33009	33521	.	+	0	ID=cds-MBO1929310.1;Parent=gene-J4731_14670;Dbxref=NCBI_GP:MBO1929310.1;Name=MBO1929310.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_14670;product=hypothetical protein;protein_id=MBO1929310.1;transl_table=11
JAGETS010000027.1	Genbank	gene	33518	33988	.	+	.	ID=gene-J4731_14675;Name=J4731_14675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_14675
JAGETS010000027.1	GeneMarkS-2+	CDS	33518	33988	.	+	0	ID=cds-MBO1929311.1;Parent=gene-J4731_14675;Dbxref=NCBI_GP:MBO1929311.1;Name=MBO1929311.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_14675;product=ABC transporter ATP-binding protein;protein_id=MBO1929311.1;transl_table=11
JAGETS010000027.1	Genbank	gene	34086	34292	.	+	.	ID=gene-J4731_14680;Name=J4731_14680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_14680
JAGETS010000027.1	GeneMarkS-2+	CDS	34086	34292	.	+	0	ID=cds-MBO1929312.1;Parent=gene-J4731_14680;Dbxref=NCBI_GP:MBO1929312.1;Name=MBO1929312.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_14680;product=hypothetical protein;protein_id=MBO1929312.1;transl_table=11
JAGETS010000027.1	Genbank	pseudogene	34304	34560	.	+	.	ID=gene-J4731_14685;Name=J4731_14685;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_14685;pseudo=true
JAGETS010000027.1	Protein Homology	CDS	34304	34560	.	+	0	ID=cds-J4731_14685;Parent=gene-J4731_14685;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005171697.1;locus_tag=J4731_14685;product=ATP-binding cassette domain-containing protein;pseudo=true;transl_table=11
JAGETS010000027.1	Genbank	pseudogene	34679	35341	.	-	.	ID=gene-J4731_14690;Name=yiiM;gbkey=Gene;gene=yiiM;gene_biotype=pseudogene;locus_tag=J4731_14690;pseudo=true
JAGETS010000027.1	Protein Homology	CDS	34679	35341	.	-	0	ID=cds-J4731_14690;Parent=gene-J4731_14690;Note=frameshifted;gbkey=CDS;gene=yiiM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011144482.1;locus_tag=J4731_14690;product=6-N-hydroxylaminopurine resistance protein;pseudo=true;transl_table=11
JAGETS010000027.1	Genbank	gene	35579	36091	.	-	.	ID=gene-J4731_14695;Name=J4731_14695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_14695
JAGETS010000027.1	GeneMarkS-2+	CDS	35579	36091	.	-	0	ID=cds-MBO1929313.1;Parent=gene-J4731_14695;Dbxref=NCBI_GP:MBO1929313.1;Name=MBO1929313.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_14695;product=hypothetical protein;protein_id=MBO1929313.1;transl_table=11
JAGETS010000027.1	Genbank	gene	36096	36392	.	-	.	ID=gene-J4731_14700;Name=J4731_14700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_14700
JAGETS010000027.1	GeneMarkS-2+	CDS	36096	36392	.	-	0	ID=cds-MBO1929314.1;Parent=gene-J4731_14700;Dbxref=NCBI_GP:MBO1929314.1;Name=MBO1929314.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_14700;product=hypothetical protein;protein_id=MBO1929314.1;transl_table=11
JAGETS010000027.1	Genbank	pseudogene	36829	38500	.	-	.	ID=gene-J4731_14705;Name=J4731_14705;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_14705;pseudo=true
JAGETS010000027.1	Protein Homology	CDS	36829	38500	.	-	0	ID=cds-J4731_14705;Parent=gene-J4731_14705;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015386954.1;locus_tag=J4731_14705;product=molecular chaperone HscC;pseudo=true;transl_table=11
JAGETS010000027.1	Genbank	pseudogene	38693	39311	.	-	.	ID=gene-J4731_14710;Name=sodA;gbkey=Gene;gene=sodA;gene_biotype=pseudogene;locus_tag=J4731_14710;pseudo=true
JAGETS010000027.1	Protein Homology	CDS	38693	39311	.	-	0	ID=cds-J4731_14710;Parent=gene-J4731_14710;Note=frameshifted;gbkey=CDS;gene=sodA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013650637.1;locus_tag=J4731_14710;product=superoxide dismutase [Mn];pseudo=true;transl_table=11
JAGETS010000027.1	Genbank	pseudogene	39728	41675	.	+	.	ID=gene-J4731_14715;Name=acs;gbkey=Gene;gene=acs;gene_biotype=pseudogene;locus_tag=J4731_14715;pseudo=true
JAGETS010000027.1	Protein Homology	CDS	39728	41675	.	+	0	ID=cds-J4731_14715;Parent=gene-J4731_14715;Note=frameshifted;gbkey=CDS;gene=acs;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014539560.1;locus_tag=J4731_14715;product=acetate--CoA ligase;pseudo=true;transl_table=11
JAGETS010000027.1	Genbank	pseudogene	41867	42176	.	+	.	ID=gene-J4731_14720;Name=J4731_14720;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_14720;pseudo=true
JAGETS010000027.1	Protein Homology	CDS	41867	42176	.	+	0	ID=cds-J4731_14720;Parent=gene-J4731_14720;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209030.1;locus_tag=J4731_14720;product=DUF485 domain-containing protein;pseudo=true;transl_table=11
JAGETS010000027.1	Genbank	pseudogene	42214	43811	.	+	.	ID=gene-J4731_14725;Name=J4731_14725;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_14725;pseudo=true
JAGETS010000027.1	Protein Homology	CDS	42214	43811	.	+	0	ID=cds-J4731_14725;Parent=gene-J4731_14725;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008455775.1;locus_tag=J4731_14725;product=cation acetate symporter;pseudo=true;transl_table=11
JAGETS010000027.1	Genbank	pseudogene	44071	44538	.	-	.	ID=gene-J4731_14730;Name=J4731_14730;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_14730;pseudo=true
JAGETS010000027.1	Protein Homology	CDS	44071	44538	.	-	0	ID=cds-J4731_14730;Parent=gene-J4731_14730;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004263250.1;locus_tag=J4731_14730;product=hypothetical protein;pseudo=true;transl_table=11
JAGETS010000027.1	Genbank	gene	46169	46284	.	-	.	ID=gene-J4731_14735;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=J4731_14735
JAGETS010000027.1	cmsearch	rRNA	46169	46284	.	-	.	ID=rna-J4731_14735;Parent=gene-J4731_14735;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=J4731_14735;product=5S ribosomal RNA
JAGETS010000027.1	cmsearch	exon	46169	46284	.	-	.	ID=exon-J4731_14735-1;Parent=rna-J4731_14735;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=J4731_14735;product=5S ribosomal RNA
JAGETS010000027.1	Genbank	gene	46421	49407	.	-	.	ID=gene-J4731_14740;Name=J4731_14740;gbkey=Gene;gene_biotype=rRNA;locus_tag=J4731_14740
JAGETS010000027.1	cmsearch	rRNA	46421	49407	.	-	.	ID=rna-J4731_14740;Parent=gene-J4731_14740;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=J4731_14740;product=23S ribosomal RNA
JAGETS010000027.1	cmsearch	exon	46421	49407	.	-	.	ID=exon-J4731_14740-1;Parent=rna-J4731_14740;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=J4731_14740;product=23S ribosomal RNA
JAGETS010000027.1	Genbank	gene	49729	49803	.	-	.	ID=gene-J4731_14745;Name=J4731_14745;gbkey=Gene;gene_biotype=tRNA;locus_tag=J4731_14745
JAGETS010000027.1	tRNAscan-SE	tRNA	49729	49803	.	-	.	ID=rna-J4731_14745;Parent=gene-J4731_14745;anticodon=(pos:complement(49768..49770));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=J4731_14745;product=tRNA-Ala
JAGETS010000027.1	tRNAscan-SE	exon	49729	49803	.	-	.	ID=exon-J4731_14745-1;Parent=rna-J4731_14745;anticodon=(pos:complement(49768..49770));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=J4731_14745;product=tRNA-Ala
JAGETS010000027.1	Genbank	gene	49934	50009	.	-	.	ID=gene-J4731_14750;Name=J4731_14750;gbkey=Gene;gene_biotype=tRNA;locus_tag=J4731_14750
JAGETS010000027.1	tRNAscan-SE	tRNA	49934	50009	.	-	.	ID=rna-J4731_14750;Parent=gene-J4731_14750;gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=J4731_14750;product=tRNA-OTHER
JAGETS010000027.1	tRNAscan-SE	exon	49934	50009	.	-	.	ID=exon-J4731_14750-1;Parent=rna-J4731_14750;gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=J4731_14750;product=tRNA-OTHER
JAGETS010000027.1	Genbank	gene	50075	51601	.	-	.	ID=gene-J4731_14755;Name=J4731_14755;gbkey=Gene;gene_biotype=rRNA;locus_tag=J4731_14755
JAGETS010000027.1	cmsearch	rRNA	50075	51601	.	-	.	ID=rna-J4731_14755;Parent=gene-J4731_14755;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=J4731_14755;product=16S ribosomal RNA
JAGETS010000027.1	cmsearch	exon	50075	51601	.	-	.	ID=exon-J4731_14755-1;Parent=rna-J4731_14755;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=J4731_14755;product=16S ribosomal RNA
JAGETS010000027.1	Genbank	pseudogene	52186	53709	.	-	.	ID=gene-J4731_14760;Name=J4731_14760;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_14760;pseudo=true
JAGETS010000027.1	Protein Homology	CDS	52186	53709	.	-	1	ID=cds-J4731_14760;Parent=gene-J4731_14760;Note=frameshifted%3B incomplete%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002461515.1;locus_tag=J4731_14760;product=AAA family ATPase;pseudo=true;transl_table=11
##sequence-region JAGETS010000028.1 1 2974
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=587
JAGETS010000028.1	Genbank	region	1	2974	.	+	.	ID=JAGETS010000028.1:1..2974;Dbxref=taxon:587;collected-by=NHLS;collection-date=2018;country=South Africa: Pretoria;gbkey=Src;isolation-source=stool;lat-lon=25.7479 S 28.2293 E;mol_type=genomic DNA;nat-host=porcine;strain=SG003
JAGETS010000028.1	Genbank	gene	135	247	.	-	.	ID=gene-J4731_14765;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=J4731_14765
JAGETS010000028.1	cmsearch	rRNA	135	247	.	-	.	ID=rna-J4731_14765;Parent=gene-J4731_14765;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=J4731_14765;product=5S ribosomal RNA
JAGETS010000028.1	cmsearch	exon	135	247	.	-	.	ID=exon-J4731_14765-1;Parent=rna-J4731_14765;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=J4731_14765;product=5S ribosomal RNA
JAGETS010000028.1	Genbank	gene	394	508	.	-	.	ID=gene-J4731_14770;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=J4731_14770
JAGETS010000028.1	cmsearch	rRNA	394	508	.	-	.	ID=rna-J4731_14770;Parent=gene-J4731_14770;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=J4731_14770;product=5S ribosomal RNA
JAGETS010000028.1	cmsearch	exon	394	508	.	-	.	ID=exon-J4731_14770-1;Parent=rna-J4731_14770;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=J4731_14770;product=5S ribosomal RNA
JAGETS010000028.1	Genbank	gene	646	2974	.	-	.	ID=gene-J4731_14775;Name=J4731_14775;end_range=2974,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=J4731_14775;partial=true
JAGETS010000028.1	cmsearch	rRNA	646	2974	.	-	.	ID=rna-J4731_14775;Parent=gene-J4731_14775;Dbxref=RFAM:RF02541;end_range=2974,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=J4731_14775;partial=true;product=23S ribosomal RNA
JAGETS010000028.1	cmsearch	exon	646	2974	.	-	.	ID=exon-J4731_14775-1;Parent=rna-J4731_14775;Dbxref=RFAM:RF02541;end_range=2974,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=J4731_14775;partial=true;product=23S ribosomal RNA
##sequence-region JAGETS010000029.1 1 5465
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=587
JAGETS010000029.1	Genbank	region	1	5465	.	+	.	ID=JAGETS010000029.1:1..5465;Dbxref=taxon:587;collected-by=NHLS;collection-date=2018;country=South Africa: Pretoria;gbkey=Src;isolation-source=stool;lat-lon=25.7479 S 28.2293 E;mol_type=genomic DNA;nat-host=porcine;strain=SG003
JAGETS010000029.1	Genbank	gene	57	172	.	-	.	ID=gene-J4731_14780;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=J4731_14780
JAGETS010000029.1	cmsearch	rRNA	57	172	.	-	.	ID=rna-J4731_14780;Parent=gene-J4731_14780;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=J4731_14780;product=5S ribosomal RNA
JAGETS010000029.1	cmsearch	exon	57	172	.	-	.	ID=exon-J4731_14780-1;Parent=rna-J4731_14780;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=J4731_14780;product=5S ribosomal RNA
JAGETS010000029.1	Genbank	gene	295	3248	.	-	.	ID=gene-J4731_14785;Name=J4731_14785;gbkey=Gene;gene_biotype=rRNA;locus_tag=J4731_14785
JAGETS010000029.1	cmsearch	rRNA	295	3248	.	-	.	ID=rna-J4731_14785;Parent=gene-J4731_14785;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=J4731_14785;product=23S ribosomal RNA
JAGETS010000029.1	cmsearch	exon	295	3248	.	-	.	ID=exon-J4731_14785-1;Parent=rna-J4731_14785;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=J4731_14785;product=23S ribosomal RNA
JAGETS010000029.1	Genbank	gene	3813	5345	.	-	.	ID=gene-J4731_14790;Name=J4731_14790;gbkey=Gene;gene_biotype=rRNA;locus_tag=J4731_14790
JAGETS010000029.1	cmsearch	rRNA	3813	5345	.	-	.	ID=rna-J4731_14790;Parent=gene-J4731_14790;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=J4731_14790;product=16S ribosomal RNA
JAGETS010000029.1	cmsearch	exon	3813	5345	.	-	.	ID=exon-J4731_14790-1;Parent=rna-J4731_14790;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=J4731_14790;product=16S ribosomal RNA
##sequence-region JAGETS010000003.1 1 5226
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=587
JAGETS010000003.1	Genbank	region	1	5226	.	+	.	ID=JAGETS010000003.1:1..5226;Dbxref=taxon:587;collected-by=NHLS;collection-date=2018;country=South Africa: Pretoria;gbkey=Src;isolation-source=stool;lat-lon=25.7479 S 28.2293 E;mol_type=genomic DNA;nat-host=porcine;strain=SG003
JAGETS010000003.1	Genbank	pseudogene	1	366	.	+	.	ID=gene-J4731_01560;Name=J4731_01560;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_01560;pseudo=true
JAGETS010000003.1	Protein Homology	CDS	1	366	.	+	1	ID=cds-J4731_01560;Parent=gene-J4731_01560;Note=frameshifted%3B incomplete%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000197395.1;locus_tag=J4731_01560;product=DUF932 domain-containing protein;pseudo=true;transl_table=11
JAGETS010000003.1	Genbank	pseudogene	384	680	.	+	.	ID=gene-J4731_01565;Name=J4731_01565;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_01565;pseudo=true
JAGETS010000003.1	Protein Homology	CDS	384	680	.	+	0	ID=cds-J4731_01565;Parent=gene-J4731_01565;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014656726.1;locus_tag=J4731_01565;product=hypothetical protein;pseudo=true;transl_table=11
JAGETS010000003.1	Genbank	pseudogene	864	1947	.	+	.	ID=gene-J4731_01570;Name=J4731_01570;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_01570;pseudo=true
JAGETS010000003.1	Protein Homology	CDS	864	1947	.	+	0	ID=cds-J4731_01570;Parent=gene-J4731_01570;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003734338.1;locus_tag=J4731_01570;product=tyrosine-type recombinase/integrase;pseudo=true;transl_table=11
JAGETS010000003.1	Genbank	pseudogene	1944	3835	.	+	.	ID=gene-J4731_01575;Name=J4731_01575;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_01575;pseudo=true
JAGETS010000003.1	Protein Homology	CDS	1944	3835	.	+	0	ID=cds-J4731_01575;Parent=gene-J4731_01575;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003734337.1;locus_tag=J4731_01575;product=tyrosine-type recombinase/integrase;pseudo=true;transl_table=11
JAGETS010000003.1	Genbank	pseudogene	3836	4211	.	+	.	ID=gene-J4731_01580;Name=J4731_01580;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_01580;pseudo=true
JAGETS010000003.1	Protein Homology	CDS	3836	4211	.	+	0	ID=cds-J4731_01580;Parent=gene-J4731_01580;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002333497.1;locus_tag=J4731_01580;product=transposase;pseudo=true;transl_table=11
JAGETS010000003.1	Genbank	pseudogene	4525	5226	.	+	.	ID=gene-J4731_01585;Name=J4731_01585;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_01585;pseudo=true
JAGETS010000003.1	Protein Homology	CDS	4525	5226	.	+	0	ID=cds-J4731_01585;Parent=gene-J4731_01585;Note=frameshifted%3B internal stop%3B incomplete%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002333496.1;locus_tag=J4731_01585;product=lincosamide nucleotidyltransferase Lnu(B);pseudo=true;transl_table=11
##sequence-region JAGETS010000030.1 1 67518
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=587
JAGETS010000030.1	Genbank	region	1	67518	.	+	.	ID=JAGETS010000030.1:1..67518;Dbxref=taxon:587;collected-by=NHLS;collection-date=2018;country=South Africa: Pretoria;gbkey=Src;isolation-source=stool;lat-lon=25.7479 S 28.2293 E;mol_type=genomic DNA;nat-host=porcine;strain=SG003
JAGETS010000030.1	Genbank	gene	1	667	.	-	.	ID=gene-J4731_14795;Name=J4731_14795;gbkey=Gene;gene_biotype=rRNA;locus_tag=J4731_14795;partial=true;start_range=.,1
JAGETS010000030.1	cmsearch	rRNA	1	667	.	-	.	ID=rna-J4731_14795;Parent=gene-J4731_14795;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=J4731_14795;partial=true;product=16S ribosomal RNA;start_range=.,1
JAGETS010000030.1	cmsearch	exon	1	667	.	-	.	ID=exon-J4731_14795-1;Parent=rna-J4731_14795;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=J4731_14795;partial=true;product=16S ribosomal RNA;start_range=.,1
JAGETS010000030.1	Genbank	pseudogene	1378	3773	.	-	.	ID=gene-J4731_14800;Name=clpB;gbkey=Gene;gene=clpB;gene_biotype=pseudogene;locus_tag=J4731_14800;pseudo=true
JAGETS010000030.1	Protein Homology	CDS	1378	3773	.	-	0	ID=cds-J4731_14800;Parent=gene-J4731_14800;Note=frameshifted%3B internal stop;gbkey=CDS;gene=clpB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002461515.1;locus_tag=J4731_14800;product=ATP-dependent chaperone ClpB;pseudo=true;transl_table=11
JAGETS010000030.1	Genbank	pseudogene	3895	4639	.	-	.	ID=gene-J4731_14805;Name=J4731_14805;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_14805;pseudo=true
JAGETS010000030.1	Protein Homology	CDS	3895	4639	.	-	0	ID=cds-J4731_14805;Parent=gene-J4731_14805;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006662609.1;locus_tag=J4731_14805;product=laccase domain-containing protein;pseudo=true;transl_table=11
JAGETS010000030.1	Genbank	pseudogene	4639	5601	.	-	.	ID=gene-J4731_14810;Name=rluD;gbkey=Gene;gene=rluD;gene_biotype=pseudogene;locus_tag=J4731_14810;pseudo=true
JAGETS010000030.1	Protein Homology	CDS	4639	5601	.	-	0	ID=cds-J4731_14810;Parent=gene-J4731_14810;Note=frameshifted%3B internal stop;gbkey=CDS;gene=rluD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016603421.1;locus_tag=J4731_14810;product=23S rRNA pseudouridine(1911/1915/1917) synthase RluD;pseudo=true;transl_table=11
JAGETS010000030.1	Genbank	pseudogene	5738	6465	.	+	.	ID=gene-J4731_14815;Name=bamD;gbkey=Gene;gene=bamD;gene_biotype=pseudogene;locus_tag=J4731_14815;pseudo=true
JAGETS010000030.1	Protein Homology	CDS	5738	6465	.	+	0	ID=cds-J4731_14815;Parent=gene-J4731_14815;Note=frameshifted;gbkey=CDS;gene=bamD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008109011.1;locus_tag=J4731_14815;product=outer membrane protein assembly factor BamD;pseudo=true;transl_table=11
JAGETS010000030.1	Genbank	pseudogene	6763	7091	.	+	.	ID=gene-J4731_14820;Name=raiA;gbkey=Gene;gene=raiA;gene_biotype=pseudogene;locus_tag=J4731_14820;pseudo=true
JAGETS010000030.1	Protein Homology	CDS	6763	7091	.	+	0	ID=cds-J4731_14820;Parent=gene-J4731_14820;Note=frameshifted;gbkey=CDS;gene=raiA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008913519.1;locus_tag=J4731_14820;product=ribosome-associated translation inhibitor RaiA;pseudo=true;transl_table=11
JAGETS010000030.1	Genbank	pseudogene	7366	8519	.	+	.	ID=gene-J4731_14825;Name=pheA;gbkey=Gene;gene=pheA;gene_biotype=pseudogene;locus_tag=J4731_14825;pseudo=true
JAGETS010000030.1	Protein Homology	CDS	7366	8519	.	+	0	ID=cds-J4731_14825;Parent=gene-J4731_14825;Note=frameshifted;gbkey=CDS;gene=pheA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006662612.1;locus_tag=J4731_14825;product=bifunctional chorismate mutase/prephenate dehydratase;pseudo=true;transl_table=11
JAGETS010000030.1	Genbank	pseudogene	8578	8816	.	-	.	ID=gene-J4731_14830;Name=J4731_14830;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_14830;pseudo=true
JAGETS010000030.1	Protein Homology	CDS	8578	8816	.	-	0	ID=cds-J4731_14830;Parent=gene-J4731_14830;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001805359.1;locus_tag=J4731_14830;product=methyl-accepting chemotaxis protein;pseudo=true;transl_table=11
JAGETS010000030.1	Genbank	pseudogene	8887	9065	.	-	.	ID=gene-J4731_14835;Name=J4731_14835;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_14835;pseudo=true
JAGETS010000030.1	Protein Homology	CDS	8887	9065	.	-	0	ID=cds-J4731_14835;Parent=gene-J4731_14835;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000467802.1;locus_tag=J4731_14835;product=hypothetical protein;pseudo=true;transl_table=11
JAGETS010000030.1	Genbank	gene	9233	9682	.	-	.	ID=gene-J4731_14840;Name=J4731_14840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_14840
JAGETS010000030.1	Protein Homology	CDS	9233	9682	.	-	0	ID=cds-MBO1929315.1;Parent=gene-J4731_14840;Dbxref=NCBI_GP:MBO1929315.1;Name=MBO1929315.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012876.1;locus_tag=J4731_14840;product=methyl-accepting chemotaxis protein;protein_id=MBO1929315.1;transl_table=11
JAGETS010000030.1	Genbank	gene	9679	9861	.	-	.	ID=gene-J4731_14845;Name=J4731_14845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_14845
JAGETS010000030.1	GeneMarkS-2+	CDS	9679	9861	.	-	0	ID=cds-MBO1929316.1;Parent=gene-J4731_14845;Dbxref=NCBI_GP:MBO1929316.1;Name=MBO1929316.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_14845;product=hypothetical protein;protein_id=MBO1929316.1;transl_table=11
JAGETS010000030.1	Genbank	pseudogene	10428	11545	.	-	.	ID=gene-J4731_14850;Name=tyrA;gbkey=Gene;gene=tyrA;gene_biotype=pseudogene;locus_tag=J4731_14850;pseudo=true
JAGETS010000030.1	Protein Homology	CDS	10428	11545	.	-	0	ID=cds-J4731_14850;Parent=gene-J4731_14850;Note=frameshifted;gbkey=CDS;gene=tyrA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006815597.1;locus_tag=J4731_14850;product=bifunctional chorismate mutase/prephenate dehydrogenase;pseudo=true;transl_table=11
JAGETS010000030.1	Genbank	pseudogene	11559	12630	.	-	.	ID=gene-J4731_14855;Name=J4731_14855;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_14855;pseudo=true
JAGETS010000030.1	Protein Homology	CDS	11559	12630	.	-	0	ID=cds-J4731_14855;Parent=gene-J4731_14855;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006662614.1;locus_tag=J4731_14855;product=3-deoxy-7-phosphoheptulonate synthase;pseudo=true;transl_table=11
JAGETS010000030.1	Genbank	pseudogene	13159	13511	.	-	.	ID=gene-J4731_14860;Name=rplS;gbkey=Gene;gene=rplS;gene_biotype=pseudogene;locus_tag=J4731_14860;pseudo=true
JAGETS010000030.1	Protein Homology	CDS	13159	13511	.	-	0	ID=cds-J4731_14860;Parent=gene-J4731_14860;Note=frameshifted;gbkey=CDS;gene=rplS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004264827.1;locus_tag=J4731_14860;product=50S ribosomal protein L19;pseudo=true;transl_table=11
JAGETS010000030.1	Genbank	pseudogene	13553	14313	.	-	.	ID=gene-J4731_14865;Name=trmD;gbkey=Gene;gene=trmD;gene_biotype=pseudogene;locus_tag=J4731_14865;pseudo=true
JAGETS010000030.1	Protein Homology	CDS	13553	14313	.	-	0	ID=cds-J4731_14865;Parent=gene-J4731_14865;Note=frameshifted;gbkey=CDS;gene=trmD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004924885.1;locus_tag=J4731_14865;product=tRNA (guanosine(37)-N1)-methyltransferase TrmD;pseudo=true;transl_table=11
JAGETS010000030.1	Genbank	pseudogene	14351	14864	.	-	.	ID=gene-J4731_14870;Name=rimM;gbkey=Gene;gene=rimM;gene_biotype=pseudogene;locus_tag=J4731_14870;pseudo=true
JAGETS010000030.1	Protein Homology	CDS	14351	14864	.	-	0	ID=cds-J4731_14870;Parent=gene-J4731_14870;Note=frameshifted;gbkey=CDS;gene=rimM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009639223.1;locus_tag=J4731_14870;product=ribosome maturation factor RimM;pseudo=true;transl_table=11
JAGETS010000030.1	Genbank	pseudogene	14911	15157	.	-	.	ID=gene-J4731_14875;Name=rpsP;gbkey=Gene;gene=rpsP;gene_biotype=pseudogene;locus_tag=J4731_14875;pseudo=true
JAGETS010000030.1	Protein Homology	CDS	14911	15157	.	-	0	ID=cds-J4731_14875;Parent=gene-J4731_14875;Note=frameshifted;gbkey=CDS;gene=rpsP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209458.1;locus_tag=J4731_14875;product=30S ribosomal protein S16;pseudo=true;transl_table=11
JAGETS010000030.1	Genbank	pseudogene	15284	16627	.	-	.	ID=gene-J4731_14880;Name=ffh;gbkey=Gene;gene=ffh;gene_biotype=pseudogene;locus_tag=J4731_14880;pseudo=true
JAGETS010000030.1	Protein Homology	CDS	15284	16627	.	-	0	ID=cds-J4731_14880;Parent=gene-J4731_14880;Note=frameshifted%3B internal stop;gbkey=CDS;gene=ffh;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004104641.1;locus_tag=J4731_14880;product=signal recognition particle protein;pseudo=true;transl_table=11
JAGETS010000030.1	Genbank	pseudogene	17009	17797	.	+	.	ID=gene-J4731_14885;Name=J4731_14885;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_14885;pseudo=true
JAGETS010000030.1	Protein Homology	CDS	17009	17797	.	+	0	ID=cds-J4731_14885;Parent=gene-J4731_14885;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004264820.1;locus_tag=J4731_14885;product=inner membrane protein YpjD;pseudo=true;transl_table=11
JAGETS010000030.1	Genbank	pseudogene	17838	19128	.	+	.	ID=gene-J4731_14890;Name=J4731_14890;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_14890;pseudo=true
JAGETS010000030.1	Protein Homology	CDS	17838	19128	.	+	0	ID=cds-J4731_14890;Parent=gene-J4731_14890;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006662616.1;locus_tag=J4731_14890;product=DUF21 domain-containing protein;pseudo=true;transl_table=11
JAGETS010000030.1	Genbank	pseudogene	19189	19684	.	-	.	ID=gene-J4731_14895;Name=luxS;gbkey=Gene;gene=luxS;gene_biotype=pseudogene;locus_tag=J4731_14895;pseudo=true
JAGETS010000030.1	Protein Homology	CDS	19189	19684	.	-	0	ID=cds-J4731_14895;Parent=gene-J4731_14895;Note=frameshifted;gbkey=CDS;gene=luxS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007763569.1;locus_tag=J4731_14895;product=S-ribosylhomocysteine lyase;pseudo=true;transl_table=11
JAGETS010000030.1	Genbank	pseudogene	19832	21358	.	-	.	ID=gene-J4731_14900;Name=J4731_14900;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_14900;pseudo=true
JAGETS010000030.1	Protein Homology	CDS	19832	21358	.	-	0	ID=cds-J4731_14900;Parent=gene-J4731_14900;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005165998.1;locus_tag=J4731_14900;product=glutamate--cysteine ligase;pseudo=true;transl_table=11
JAGETS010000030.1	Genbank	gene	21549	21625	.	-	.	ID=gene-J4731_14905;Name=J4731_14905;gbkey=Gene;gene_biotype=tRNA;locus_tag=J4731_14905
JAGETS010000030.1	tRNAscan-SE	tRNA	21549	21625	.	-	.	ID=rna-J4731_14905;Parent=gene-J4731_14905;anticodon=(pos:complement(21589..21591));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=J4731_14905;product=tRNA-Arg
JAGETS010000030.1	tRNAscan-SE	exon	21549	21625	.	-	.	ID=exon-J4731_14905-1;Parent=rna-J4731_14905;anticodon=(pos:complement(21589..21591));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=J4731_14905;product=tRNA-Arg
JAGETS010000030.1	Genbank	gene	21719	21791	.	-	.	ID=gene-J4731_14910;Name=J4731_14910;gbkey=Gene;gene_biotype=tRNA;locus_tag=J4731_14910
JAGETS010000030.1	tRNAscan-SE	tRNA	21719	21791	.	-	.	ID=rna-J4731_14910;Parent=gene-J4731_14910;anticodon=(pos:complement(21755..21757));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=J4731_14910;product=tRNA-Arg
JAGETS010000030.1	tRNAscan-SE	exon	21719	21791	.	-	.	ID=exon-J4731_14910-1;Parent=rna-J4731_14910;anticodon=(pos:complement(21755..21757));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=J4731_14910;product=tRNA-Arg
JAGETS010000030.1	Genbank	gene	21930	22006	.	-	.	ID=gene-J4731_14915;Name=J4731_14915;gbkey=Gene;gene_biotype=tRNA;locus_tag=J4731_14915
JAGETS010000030.1	tRNAscan-SE	tRNA	21930	22006	.	-	.	ID=rna-J4731_14915;Parent=gene-J4731_14915;anticodon=(pos:complement(21970..21972));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=J4731_14915;product=tRNA-Arg
JAGETS010000030.1	tRNAscan-SE	exon	21930	22006	.	-	.	ID=exon-J4731_14915-1;Parent=rna-J4731_14915;anticodon=(pos:complement(21970..21972));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=J4731_14915;product=tRNA-Arg
JAGETS010000030.1	Genbank	gene	22018	22108	.	-	.	ID=gene-J4731_14920;Name=J4731_14920;gbkey=Gene;gene_biotype=tRNA;locus_tag=J4731_14920
JAGETS010000030.1	tRNAscan-SE	tRNA	22018	22108	.	-	.	ID=rna-J4731_14920;Parent=gene-J4731_14920;anticodon=(pos:complement(22072..22074));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=J4731_14920;product=tRNA-Ser
JAGETS010000030.1	tRNAscan-SE	exon	22018	22108	.	-	.	ID=exon-J4731_14920-1;Parent=rna-J4731_14920;anticodon=(pos:complement(22072..22074));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=J4731_14920;product=tRNA-Ser
JAGETS010000030.1	Genbank	gene	22527	22721	.	-	.	ID=gene-J4731_14925;Name=csrA;gbkey=Gene;gene=csrA;gene_biotype=protein_coding;locus_tag=J4731_14925
JAGETS010000030.1	Protein Homology	CDS	22527	22721	.	-	0	ID=cds-MBO1929317.1;Parent=gene-J4731_14925;Dbxref=NCBI_GP:MBO1929317.1;Name=MBO1929317.1;gbkey=CDS;gene=csrA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004237871.1;locus_tag=J4731_14925;product=carbon storage regulator CsrA;protein_id=MBO1929317.1;transl_table=11
JAGETS010000030.1	Genbank	pseudogene	22909	25523	.	-	.	ID=gene-J4731_14930;Name=alaS;gbkey=Gene;gene=alaS;gene_biotype=pseudogene;locus_tag=J4731_14930;pseudo=true
JAGETS010000030.1	Protein Homology	CDS	22909	25523	.	-	0	ID=cds-J4731_14930;Parent=gene-J4731_14930;Note=frameshifted;gbkey=CDS;gene=alaS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311581.1;locus_tag=J4731_14930;product=alanine--tRNA ligase;pseudo=true;transl_table=11
JAGETS010000030.1	Genbank	pseudogene	25829	26910	.	-	.	ID=gene-J4731_14935;Name=recA;gbkey=Gene;gene=recA;gene_biotype=pseudogene;locus_tag=J4731_14935;pseudo=true
JAGETS010000030.1	Protein Homology	CDS	25829	26910	.	-	0	ID=cds-J4731_14935;Parent=gene-J4731_14935;Note=frameshifted%3B internal stop;gbkey=CDS;gene=recA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004932541.1;locus_tag=J4731_14935;product=recombinase RecA;pseudo=true;transl_table=11
JAGETS010000030.1	Genbank	pseudogene	27040	27516	.	-	.	ID=gene-J4731_14940;Name=pncC;gbkey=Gene;gene=pncC;gene_biotype=pseudogene;locus_tag=J4731_14940;pseudo=true
JAGETS010000030.1	Protein Homology	CDS	27040	27516	.	-	0	ID=cds-J4731_14940;Parent=gene-J4731_14940;Note=frameshifted%3B internal stop;gbkey=CDS;gene=pncC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004722659.1;locus_tag=J4731_14940;product=nicotinamide-nucleotide amidase;pseudo=true;transl_table=11
JAGETS010000030.1	Genbank	pseudogene	27541	28728	.	-	.	ID=gene-J4731_14945;Name=lplT;gbkey=Gene;gene=lplT;gene_biotype=pseudogene;locus_tag=J4731_14945;pseudo=true
JAGETS010000030.1	Protein Homology	CDS	27541	28728	.	-	0	ID=cds-J4731_14945;Parent=gene-J4731_14945;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;gene=lplT;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004247400.1;locus_tag=J4731_14945;product=lysophospholipid transporter LplT;pseudo=true;transl_table=11
JAGETS010000030.1	Genbank	pseudogene	28730	30861	.	-	.	ID=gene-J4731_14950;Name=aas;gbkey=Gene;gene=aas;gene_biotype=pseudogene;locus_tag=J4731_14950;pseudo=true
JAGETS010000030.1	Protein Homology	CDS	28730	30861	.	-	0	ID=cds-J4731_14950;Parent=gene-J4731_14950;Note=frameshifted;gbkey=CDS;gene=aas;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004952293.1;locus_tag=J4731_14950;product=bifunctional acyl-ACP--phospholipid O-acyltransferase/long-chain-fatty-acid--ACP ligase;pseudo=true;transl_table=11
JAGETS010000030.1	Genbank	pseudogene	31007	31491	.	-	.	ID=gene-J4731_14955;Name=aroL;gbkey=Gene;gene=aroL;gene_biotype=pseudogene;locus_tag=J4731_14955;pseudo=true
JAGETS010000030.1	Protein Homology	CDS	31007	31491	.	-	0	ID=cds-J4731_14955;Parent=gene-J4731_14955;Note=frameshifted;gbkey=CDS;gene=aroL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008913500.1;locus_tag=J4731_14955;product=shikimate kinase AroL;pseudo=true;transl_table=11
JAGETS010000030.1	Genbank	pseudogene	31616	32861	.	-	.	ID=gene-J4731_14960;Name=proA;gbkey=Gene;gene=proA;gene_biotype=pseudogene;locus_tag=J4731_14960;pseudo=true
JAGETS010000030.1	Protein Homology	CDS	31616	32861	.	-	0	ID=cds-J4731_14960;Parent=gene-J4731_14960;Note=frameshifted%3B internal stop;gbkey=CDS;gene=proA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004264803.1;locus_tag=J4731_14960;product=glutamate-5-semialdehyde dehydrogenase;pseudo=true;transl_table=11
JAGETS010000030.1	Genbank	pseudogene	32864	33991	.	-	.	ID=gene-J4731_14965;Name=proB;gbkey=Gene;gene=proB;gene_biotype=pseudogene;locus_tag=J4731_14965;pseudo=true
JAGETS010000030.1	Protein Homology	CDS	32864	33991	.	-	0	ID=cds-J4731_14965;Parent=gene-J4731_14965;Note=frameshifted%3B internal stop;gbkey=CDS;gene=proB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013024784.1;locus_tag=J4731_14965;product=glutamate 5-kinase;pseudo=true;transl_table=11
JAGETS010000030.1	Genbank	pseudogene	34061	34461	.	-	.	ID=gene-J4731_14970;Name=crl;gbkey=Gene;gene=crl;gene_biotype=pseudogene;locus_tag=J4731_14970;pseudo=true
JAGETS010000030.1	Protein Homology	CDS	34061	34461	.	-	0	ID=cds-J4731_14970;Parent=gene-J4731_14970;Note=frameshifted;gbkey=CDS;gene=crl;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004923183.1;locus_tag=J4731_14970;product=sigma factor-binding protein Crl;pseudo=true;transl_table=11
JAGETS010000030.1	Genbank	pseudogene	34532	35628	.	-	.	ID=gene-J4731_14975;Name=frsA;gbkey=Gene;gene=frsA;gene_biotype=pseudogene;locus_tag=J4731_14975;pseudo=true
JAGETS010000030.1	Protein Homology	CDS	34532	35628	.	-	0	ID=cds-J4731_14975;Parent=gene-J4731_14975;Note=frameshifted;gbkey=CDS;gene=frsA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006815619.1;locus_tag=J4731_14975;product=esterase FrsA;pseudo=true;transl_table=11
JAGETS010000030.1	Genbank	gene	35625	35777	.	-	.	ID=gene-J4731_14980;Name=J4731_14980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_14980
JAGETS010000030.1	GeneMarkS-2+	CDS	35625	35777	.	-	0	ID=cds-MBO1929318.1;Parent=gene-J4731_14980;Dbxref=NCBI_GP:MBO1929318.1;Name=MBO1929318.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_14980;product=alpha/beta hydrolase;protein_id=MBO1929318.1;transl_table=11
JAGETS010000030.1	Genbank	gene	35933	36424	.	-	.	ID=gene-J4731_14985;Name=gpt;gbkey=Gene;gene=gpt;gene_biotype=protein_coding;locus_tag=J4731_14985
JAGETS010000030.1	Protein Homology	CDS	35933	36424	.	-	0	ID=cds-MBO1929319.1;Parent=gene-J4731_14985;Dbxref=NCBI_GP:MBO1929319.1;Name=MBO1929319.1;gbkey=CDS;gene=gpt;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004129200.1;locus_tag=J4731_14985;product=xanthine phosphoribosyltransferase;protein_id=MBO1929319.1;transl_table=11
JAGETS010000030.1	Genbank	pseudogene	36897	38308	.	+	.	ID=gene-J4731_14990;Name=pepD;gbkey=Gene;gene=pepD;gene_biotype=pseudogene;locus_tag=J4731_14990;pseudo=true
JAGETS010000030.1	Protein Homology	CDS	36897	38308	.	+	0	ID=cds-J4731_14990;Parent=gene-J4731_14990;Note=frameshifted;gbkey=CDS;gene=pepD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007698197.1;locus_tag=J4731_14990;product=beta-Ala-His dipeptidase;pseudo=true;transl_table=11
JAGETS010000030.1	Genbank	pseudogene	38356	39376	.	-	.	ID=gene-J4731_14995;Name=dinB;gbkey=Gene;gene=dinB;gene_biotype=pseudogene;locus_tag=J4731_14995;pseudo=true
JAGETS010000030.1	Protein Homology	CDS	38356	39376	.	-	0	ID=cds-J4731_14995;Parent=gene-J4731_14995;Note=frameshifted;gbkey=CDS;gene=dinB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006662628.1;locus_tag=J4731_14995;product=DNA polymerase IV;pseudo=true;transl_table=11
JAGETS010000030.1	Genbank	pseudogene	39736	40558	.	+	.	ID=gene-J4731_15000;Name=J4731_15000;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_15000;pseudo=true
JAGETS010000030.1	Protein Homology	CDS	39736	40558	.	+	0	ID=cds-J4731_15000;Parent=gene-J4731_15000;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014228033.1;locus_tag=J4731_15000;product=glycerophosphodiester phosphodiesterase;pseudo=true;transl_table=11
JAGETS010000030.1	Genbank	pseudogene	41194	41423	.	-	.	ID=gene-J4731_15005;Name=nqrM;gbkey=Gene;gene=nqrM;gene_biotype=pseudogene;locus_tag=J4731_15005;pseudo=true
JAGETS010000030.1	Protein Homology	CDS	41194	41423	.	-	0	ID=cds-J4731_15005;Parent=gene-J4731_15005;Note=frameshifted;gbkey=CDS;gene=nqrM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004244797.1;locus_tag=J4731_15005;product=(Na+)-NQR maturation NqrM;pseudo=true;transl_table=11
JAGETS010000030.1	Genbank	pseudogene	41448	42462	.	-	.	ID=gene-J4731_15010;Name=J4731_15010;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_15010;pseudo=true
JAGETS010000030.1	Protein Homology	CDS	41448	42462	.	-	0	ID=cds-J4731_15010;Parent=gene-J4731_15010;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006657398.1;locus_tag=J4731_15010;product=FAD:protein FMN transferase;pseudo=true;transl_table=11
JAGETS010000030.1	Genbank	pseudogene	42701	43888	.	-	.	ID=gene-J4731_15015;Name=nqrF;gbkey=Gene;gene=nqrF;gene_biotype=pseudogene;locus_tag=J4731_15015;pseudo=true
JAGETS010000030.1	Protein Homology	CDS	42701	43888	.	-	0	ID=cds-J4731_15015;Parent=gene-J4731_15015;Note=frameshifted%3B internal stop;gbkey=CDS;gene=nqrF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005179973.1;locus_tag=J4731_15015;product=NADH:ubiquinone reductase (Na(+)-transporting) subunit F;pseudo=true;transl_table=11
JAGETS010000030.1	Genbank	pseudogene	43930	44524	.	-	.	ID=gene-J4731_15020;Name=nqrE;gbkey=Gene;gene=nqrE;gene_biotype=pseudogene;locus_tag=J4731_15020;pseudo=true
JAGETS010000030.1	Protein Homology	CDS	43930	44524	.	-	0	ID=cds-J4731_15020;Parent=gene-J4731_15020;Note=frameshifted;gbkey=CDS;gene=nqrE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225269.1;locus_tag=J4731_15020;product=NADH:ubiquinone reductase (Na(+)-transporting) subunit E;pseudo=true;transl_table=11
JAGETS010000030.1	Genbank	pseudogene	44508	45142	.	-	.	ID=gene-J4731_15025;Name=J4731_15025;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_15025;pseudo=true
JAGETS010000030.1	Protein Homology	CDS	44508	45142	.	-	0	ID=cds-J4731_15025;Parent=gene-J4731_15025;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225268.1;locus_tag=J4731_15025;product=NADH:ubiquinone reductase (Na(+)-transporting) subunit D;pseudo=true;transl_table=11
JAGETS010000030.1	Genbank	pseudogene	45146	45918	.	-	.	ID=gene-J4731_15030;Name=J4731_15030;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_15030;pseudo=true
JAGETS010000030.1	Protein Homology	CDS	45146	45918	.	-	0	ID=cds-J4731_15030;Parent=gene-J4731_15030;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015376731.1;locus_tag=J4731_15030;product=Na(+)-translocating NADH-quinone reductase subunit C;pseudo=true;transl_table=11
JAGETS010000030.1	Genbank	pseudogene	45928	47162	.	-	.	ID=gene-J4731_15035;Name=J4731_15035;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_15035;pseudo=true
JAGETS010000030.1	Protein Homology	CDS	45928	47162	.	-	0	ID=cds-J4731_15035;Parent=gene-J4731_15035;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225266.1;locus_tag=J4731_15035;product=NADH:ubiquinone reductase (Na(+)-transporting) subunit B;pseudo=true;transl_table=11
JAGETS010000030.1	Genbank	pseudogene	47167	48410	.	-	.	ID=gene-J4731_15040;Name=J4731_15040;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_15040;pseudo=true
JAGETS010000030.1	Protein Homology	CDS	47167	48410	.	-	0	ID=cds-J4731_15040;Parent=gene-J4731_15040;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006662631.1;locus_tag=J4731_15040;product=Na(+)-translocating NADH-quinone reductase subunit A;pseudo=true;transl_table=11
JAGETS010000030.1	Genbank	pseudogene	48963	49512	.	+	.	ID=gene-J4731_15045;Name=J4731_15045;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_15045;pseudo=true
JAGETS010000030.1	Protein Homology	CDS	48963	49512	.	+	0	ID=cds-J4731_15045;Parent=gene-J4731_15045;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015841444.1;locus_tag=J4731_15045;product=murein L%2CD-transpeptidase;pseudo=true;transl_table=11
JAGETS010000030.1	Genbank	pseudogene	49541	50278	.	-	.	ID=gene-J4731_15050;Name=J4731_15050;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_15050;pseudo=true
JAGETS010000030.1	Protein Homology	CDS	49541	50278	.	-	0	ID=cds-J4731_15050;Parent=gene-J4731_15050;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006657390.1;locus_tag=J4731_15050;product=class II glutamine amidotransferase;pseudo=true;transl_table=11
JAGETS010000030.1	Genbank	pseudogene	50327	50892	.	-	.	ID=gene-J4731_15055;Name=lpcA;gbkey=Gene;gene=lpcA;gene_biotype=pseudogene;locus_tag=J4731_15055;pseudo=true
JAGETS010000030.1	Protein Homology	CDS	50327	50892	.	-	0	ID=cds-J4731_15055;Parent=gene-J4731_15055;Note=frameshifted;gbkey=CDS;gene=lpcA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459308.1;locus_tag=J4731_15055;product=D-sedoheptulose 7-phosphate isomerase;pseudo=true;transl_table=11
JAGETS010000030.1	Genbank	pseudogene	51417	53706	.	+	.	ID=gene-J4731_15060;Name=fadE;gbkey=Gene;gene=fadE;gene_biotype=pseudogene;locus_tag=J4731_15060;pseudo=true
JAGETS010000030.1	Protein Homology	CDS	51417	53706	.	+	0	ID=cds-J4731_15060;Parent=gene-J4731_15060;Note=frameshifted;gbkey=CDS;gene=fadE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014656672.1;locus_tag=J4731_15060;product=acyl-CoA dehydrogenase FadE;pseudo=true;transl_table=11
JAGETS010000030.1	Genbank	gene	54642	55415	.	-	.	ID=gene-J4731_15065;Name=J4731_15065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_15065
JAGETS010000030.1	GeneMarkS-2+	CDS	54642	55415	.	-	0	ID=cds-MBO1929320.1;Parent=gene-J4731_15065;Dbxref=NCBI_GP:MBO1929320.1;Name=MBO1929320.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_15065;product=hypothetical protein;protein_id=MBO1929320.1;transl_table=11
JAGETS010000030.1	Genbank	gene	55412	55693	.	-	.	ID=gene-J4731_15070;Name=J4731_15070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_15070
JAGETS010000030.1	GeneMarkS-2+	CDS	55412	55693	.	-	0	ID=cds-MBO1929321.1;Parent=gene-J4731_15070;Dbxref=NCBI_GP:MBO1929321.1;Name=MBO1929321.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_15070;product=hypothetical protein;protein_id=MBO1929321.1;transl_table=11
JAGETS010000030.1	Genbank	gene	55739	55987	.	-	.	ID=gene-J4731_15075;Name=J4731_15075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_15075
JAGETS010000030.1	GeneMarkS-2+	CDS	55739	55987	.	-	0	ID=cds-MBO1929322.1;Parent=gene-J4731_15075;Dbxref=NCBI_GP:MBO1929322.1;Name=MBO1929322.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_15075;product=hypothetical protein;protein_id=MBO1929322.1;transl_table=11
JAGETS010000030.1	Genbank	pseudogene	56512	57742	.	-	.	ID=gene-J4731_15080;Name=lysA;gbkey=Gene;gene=lysA;gene_biotype=pseudogene;locus_tag=J4731_15080;pseudo=true
JAGETS010000030.1	Protein Homology	CDS	56512	57742	.	-	0	ID=cds-J4731_15080;Parent=gene-J4731_15080;Note=frameshifted;gbkey=CDS;gene=lysA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004237839.1;locus_tag=J4731_15080;product=diaminopimelate decarboxylase;pseudo=true;transl_table=11
JAGETS010000030.1	Genbank	pseudogene	57874	58805	.	+	.	ID=gene-J4731_15085;Name=J4731_15085;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_15085;pseudo=true
JAGETS010000030.1	Protein Homology	CDS	57874	58805	.	+	0	ID=cds-J4731_15085;Parent=gene-J4731_15085;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008913475.1;locus_tag=J4731_15085;product=LysR family transcriptional regulator;pseudo=true;transl_table=11
JAGETS010000030.1	Genbank	pseudogene	58779	59690	.	-	.	ID=gene-J4731_15090;Name=J4731_15090;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_15090;pseudo=true
JAGETS010000030.1	Protein Homology	CDS	58779	59690	.	-	0	ID=cds-J4731_15090;Parent=gene-J4731_15090;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004923234.1;locus_tag=J4731_15090;product=LysR family transcriptional regulator;pseudo=true;transl_table=11
JAGETS010000030.1	Genbank	pseudogene	59820	60688	.	+	.	ID=gene-J4731_15095;Name=J4731_15095;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_15095;pseudo=true
JAGETS010000030.1	Protein Homology	CDS	59820	60688	.	+	0	ID=cds-J4731_15095;Parent=gene-J4731_15095;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006657383.1;locus_tag=J4731_15095;product=MBL fold metallo-hydrolase;pseudo=true;transl_table=11
JAGETS010000030.1	Genbank	pseudogene	60860	61503	.	+	.	ID=gene-J4731_15100;Name=J4731_15100;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_15100;pseudo=true
JAGETS010000030.1	Protein Homology	CDS	60860	61503	.	+	0	ID=cds-J4731_15100;Parent=gene-J4731_15100;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004264718.1;locus_tag=J4731_15100;product=DsbA family protein;pseudo=true;transl_table=11
JAGETS010000030.1	Genbank	gene	61747	62070	.	-	.	ID=gene-J4731_15105;Name=J4731_15105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_15105
JAGETS010000030.1	Protein Homology	CDS	61747	62070	.	-	0	ID=cds-MBO1929323.1;Parent=gene-J4731_15105;Dbxref=NCBI_GP:MBO1929323.1;Name=MBO1929323.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013632.1;locus_tag=J4731_15105;product=prepilin peptidase;protein_id=MBO1929323.1;transl_table=11
JAGETS010000030.1	Genbank	pseudogene	62636	63359	.	+	.	ID=gene-J4731_15110;Name=rsmE;gbkey=Gene;gene=rsmE;gene_biotype=pseudogene;locus_tag=J4731_15110;pseudo=true
JAGETS010000030.1	Protein Homology	CDS	62636	63359	.	+	0	ID=cds-J4731_15110;Parent=gene-J4731_15110;Note=frameshifted;gbkey=CDS;gene=rsmE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209975.1;locus_tag=J4731_15110;product=16S rRNA (uracil(1498)-N(3))-methyltransferase;pseudo=true;transl_table=11
JAGETS010000030.1	Genbank	pseudogene	63367	64310	.	+	.	ID=gene-J4731_15115;Name=gshB;gbkey=Gene;gene=gshB;gene_biotype=pseudogene;locus_tag=J4731_15115;pseudo=true
JAGETS010000030.1	Protein Homology	CDS	63367	64310	.	+	0	ID=cds-J4731_15115;Parent=gene-J4731_15115;Note=frameshifted;gbkey=CDS;gene=gshB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011145511.1;locus_tag=J4731_15115;product=glutathione synthase;pseudo=true;transl_table=11
JAGETS010000030.1	Genbank	pseudogene	64481	65036	.	+	.	ID=gene-J4731_15120;Name=J4731_15120;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_15120;pseudo=true
JAGETS010000030.1	Protein Homology	CDS	64481	65036	.	+	0	ID=cds-J4731_15120;Parent=gene-J4731_15120;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015841840.1;locus_tag=J4731_15120;product=YqgE/AlgH family protein;pseudo=true;transl_table=11
JAGETS010000030.1	Genbank	pseudogene	65036	65453	.	+	.	ID=gene-J4731_15125;Name=ruvX;gbkey=Gene;gene=ruvX;gene_biotype=pseudogene;locus_tag=J4731_15125;pseudo=true
JAGETS010000030.1	Protein Homology	CDS	65036	65453	.	+	0	ID=cds-J4731_15125;Parent=gene-J4731_15125;Note=frameshifted;gbkey=CDS;gene=ruvX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004923249.1;locus_tag=J4731_15125;product=Holliday junction resolvase RuvX;pseudo=true;transl_table=11
JAGETS010000030.1	Genbank	pseudogene	65598	66271	.	+	.	ID=gene-J4731_15130;Name=J4731_15130;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_15130;pseudo=true
JAGETS010000030.1	Protein Homology	CDS	65598	66271	.	+	0	ID=cds-J4731_15130;Parent=gene-J4731_15130;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000997795.1;locus_tag=J4731_15130;product=YggS family pyridoxal phosphate-dependent enzyme;pseudo=true;transl_table=11
JAGETS010000030.1	Genbank	pseudogene	66302	67043	.	+	.	ID=gene-J4731_15135;Name=J4731_15135;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_15135;pseudo=true
JAGETS010000030.1	Protein Homology	CDS	66302	67043	.	+	0	ID=cds-J4731_15135;Parent=gene-J4731_15135;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006815648.1;locus_tag=J4731_15135;product=pyrroline-5-carboxylate reductase;pseudo=true;transl_table=11
##sequence-region JAGETS010000031.1 1 113266
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=587
JAGETS010000031.1	Genbank	region	1	113266	.	+	.	ID=JAGETS010000031.1:1..113266;Dbxref=taxon:587;collected-by=NHLS;collection-date=2018;country=South Africa: Pretoria;gbkey=Src;isolation-source=stool;lat-lon=25.7479 S 28.2293 E;mol_type=genomic DNA;nat-host=porcine;strain=SG003
JAGETS010000031.1	Genbank	gene	1	275	.	+	.	ID=gene-J4731_15140;Name=J4731_15140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_15140;partial=true;start_range=.,1
JAGETS010000031.1	GeneMarkS-2+	CDS	1	275	.	+	2	ID=cds-MBO1929324.1;Parent=gene-J4731_15140;Dbxref=NCBI_GP:MBO1929324.1;Name=MBO1929324.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_15140;partial=true;product=hypothetical protein;protein_id=MBO1929324.1;start_range=.,1;transl_table=11
JAGETS010000031.1	Genbank	gene	600	674	.	-	.	ID=gene-J4731_15145;Name=J4731_15145;gbkey=Gene;gene_biotype=tRNA;locus_tag=J4731_15145
JAGETS010000031.1	tRNAscan-SE	tRNA	600	674	.	-	.	ID=rna-J4731_15145;Parent=gene-J4731_15145;gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=J4731_15145;product=tRNA-OTHER
JAGETS010000031.1	tRNAscan-SE	exon	600	674	.	-	.	ID=exon-J4731_15145-1;Parent=rna-J4731_15145;gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=J4731_15145;product=tRNA-OTHER
JAGETS010000031.1	Genbank	pseudogene	1025	1769	.	+	.	ID=gene-J4731_15150;Name=mlaA;gbkey=Gene;gene=mlaA;gene_biotype=pseudogene;locus_tag=J4731_15150;pseudo=true
JAGETS010000031.1	Protein Homology	CDS	1025	1769	.	+	0	ID=cds-J4731_15150;Parent=gene-J4731_15150;Note=frameshifted%3B internal stop;gbkey=CDS;gene=mlaA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012146095.1;locus_tag=J4731_15150;product=phospholipid-binding lipoprotein MlaA;pseudo=true;transl_table=11
JAGETS010000031.1	Genbank	pseudogene	2339	3650	.	-	.	ID=gene-J4731_15155;Name=fadL;gbkey=Gene;gene=fadL;gene_biotype=pseudogene;locus_tag=J4731_15155;pseudo=true
JAGETS010000031.1	Protein Homology	CDS	2339	3650	.	-	0	ID=cds-J4731_15155;Parent=gene-J4731_15155;Note=frameshifted%3B internal stop;gbkey=CDS;gene=fadL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001766332.1;locus_tag=J4731_15155;product=long-chain fatty acid transporter FadL;pseudo=true;transl_table=11
JAGETS010000031.1	Genbank	gene	4004	4288	.	+	.	ID=gene-J4731_15160;Name=J4731_15160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_15160
JAGETS010000031.1	Protein Homology	CDS	4004	4288	.	+	0	ID=cds-MBO1929325.1;Parent=gene-J4731_15160;Dbxref=NCBI_GP:MBO1929325.1;Name=MBO1929325.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014656292.1;locus_tag=J4731_15160;product=YfcZ/YiiS family protein;protein_id=MBO1929325.1;transl_table=11
JAGETS010000031.1	Genbank	pseudogene	4568	5884	.	+	.	ID=gene-J4731_15165;Name=fadI;gbkey=Gene;gene=fadI;gene_biotype=pseudogene;locus_tag=J4731_15165;pseudo=true
JAGETS010000031.1	Protein Homology	CDS	4568	5884	.	+	0	ID=cds-J4731_15165;Parent=gene-J4731_15165;Note=frameshifted%3B internal stop;gbkey=CDS;gene=fadI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008814077.1;locus_tag=J4731_15165;product=acetyl-CoA C-acyltransferase FadI;pseudo=true;transl_table=11
JAGETS010000031.1	Genbank	pseudogene	5884	8087	.	+	.	ID=gene-J4731_15170;Name=fadJ;gbkey=Gene;gene=fadJ;gene_biotype=pseudogene;locus_tag=J4731_15170;pseudo=true
JAGETS010000031.1	Protein Homology	CDS	5884	8087	.	+	0	ID=cds-J4731_15170;Parent=gene-J4731_15170;Note=frameshifted%3B internal stop;gbkey=CDS;gene=fadJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002463520.1;locus_tag=J4731_15170;product=fatty acid oxidation complex subunit alpha FadJ;pseudo=true;transl_table=11
JAGETS010000031.1	Genbank	pseudogene	8432	8914	.	+	.	ID=gene-J4731_15175;Name=sixA;gbkey=Gene;gene=sixA;gene_biotype=pseudogene;locus_tag=J4731_15175;pseudo=true
JAGETS010000031.1	Protein Homology	CDS	8432	8914	.	+	0	ID=cds-J4731_15175;Parent=gene-J4731_15175;Note=internal stop;gbkey=CDS;gene=sixA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012104883.1;locus_tag=J4731_15175;product=phosphohistidine phosphatase SixA;pseudo=true;transl_table=11
JAGETS010000031.1	Genbank	pseudogene	8934	9435	.	-	.	ID=gene-J4731_15180;Name=smrB;gbkey=Gene;gene=smrB;gene_biotype=pseudogene;locus_tag=J4731_15180;pseudo=true
JAGETS010000031.1	Protein Homology	CDS	8934	9435	.	-	0	ID=cds-J4731_15180;Parent=gene-J4731_15180;Note=frameshifted;gbkey=CDS;gene=smrB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006326965.1;locus_tag=J4731_15180;product=endonuclease SmrB;pseudo=true;transl_table=11
JAGETS010000031.1	Genbank	pseudogene	9690	10913	.	+	.	ID=gene-J4731_15185;Name=J4731_15185;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_15185;pseudo=true
JAGETS010000031.1	Protein Homology	CDS	9690	10913	.	+	0	ID=cds-J4731_15185;Parent=gene-J4731_15185;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004257194.1;locus_tag=J4731_15185;product=imidazolonepropionase;pseudo=true;transl_table=11
JAGETS010000031.1	Genbank	pseudogene	11178	11883	.	+	.	ID=gene-J4731_15190;Name=J4731_15190;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_15190;pseudo=true
JAGETS010000031.1	Protein Homology	CDS	11178	11883	.	+	0	ID=cds-J4731_15190;Parent=gene-J4731_15190;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008910666.1;locus_tag=J4731_15190;product=UTRA domain-containing protein;pseudo=true;transl_table=11
JAGETS010000031.1	Genbank	pseudogene	12279	12945	.	+	.	ID=gene-J4731_15195;Name=J4731_15195;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_15195;pseudo=true
JAGETS010000031.1	Protein Homology	CDS	12279	12945	.	+	0	ID=cds-J4731_15195;Parent=gene-J4731_15195;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225921.1;locus_tag=J4731_15195;product=hypothetical protein;pseudo=true;transl_table=11
JAGETS010000031.1	Genbank	gene	12923	13345	.	+	.	ID=gene-J4731_15200;Name=J4731_15200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_15200
JAGETS010000031.1	Protein Homology	CDS	12923	13345	.	+	0	ID=cds-MBO1929326.1;Parent=gene-J4731_15200;Dbxref=NCBI_GP:MBO1929326.1;Name=MBO1929326.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013351.1;locus_tag=J4731_15200;product=hypothetical protein;protein_id=MBO1929326.1;transl_table=11
JAGETS010000031.1	Genbank	gene	13418	13582	.	+	.	ID=gene-J4731_15205;Name=J4731_15205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_15205
JAGETS010000031.1	Protein Homology	CDS	13418	13582	.	+	0	ID=cds-MBO1929327.1;Parent=gene-J4731_15205;Dbxref=NCBI_GP:MBO1929327.1;Name=MBO1929327.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF036635.1;locus_tag=J4731_15205;product=hypothetical protein;protein_id=MBO1929327.1;transl_table=11
JAGETS010000031.1	Genbank	gene	13549	13863	.	+	.	ID=gene-J4731_15210;Name=J4731_15210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_15210
JAGETS010000031.1	Protein Homology	CDS	13549	13863	.	+	0	ID=cds-MBO1929328.1;Parent=gene-J4731_15210;Dbxref=NCBI_GP:MBO1929328.1;Name=MBO1929328.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF036635.1;locus_tag=J4731_15210;product=hypothetical protein;protein_id=MBO1929328.1;transl_table=11
JAGETS010000031.1	Genbank	pseudogene	13889	15429	.	+	.	ID=gene-J4731_15215;Name=hutH;gbkey=Gene;gene=hutH;gene_biotype=pseudogene;locus_tag=J4731_15215;pseudo=true
JAGETS010000031.1	Protein Homology	CDS	13889	15429	.	+	0	ID=cds-J4731_15215;Parent=gene-J4731_15215;Note=frameshifted;gbkey=CDS;gene=hutH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006660235.1;locus_tag=J4731_15215;product=histidine ammonia-lyase;pseudo=true;transl_table=11
JAGETS010000031.1	Genbank	pseudogene	15502	16883	.	+	.	ID=gene-J4731_15220;Name=J4731_15220;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_15220;pseudo=true
JAGETS010000031.1	Protein Homology	CDS	15502	16883	.	+	0	ID=cds-J4731_15220;Parent=gene-J4731_15220;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006661337.1;locus_tag=J4731_15220;product=amino acid permease;pseudo=true;transl_table=11
JAGETS010000031.1	Genbank	pseudogene	17092	18058	.	+	.	ID=gene-J4731_15225;Name=prmB;gbkey=Gene;gene=prmB;gene_biotype=pseudogene;locus_tag=J4731_15225;pseudo=true
JAGETS010000031.1	Protein Homology	CDS	17092	18058	.	+	0	ID=cds-J4731_15225;Parent=gene-J4731_15225;Note=frameshifted%3B internal stop;gbkey=CDS;gene=prmB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008910676.1;locus_tag=J4731_15225;product=50S ribosomal protein L3 N(5)-glutamine methyltransferase;pseudo=true;transl_table=11
JAGETS010000031.1	Genbank	pseudogene	18134	19177	.	+	.	ID=gene-J4731_15230;Name=aroC;gbkey=Gene;gene=aroC;gene_biotype=pseudogene;locus_tag=J4731_15230;pseudo=true
JAGETS010000031.1	Protein Homology	CDS	18134	19177	.	+	0	ID=cds-J4731_15230;Parent=gene-J4731_15230;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;gene=aroC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129642.1;locus_tag=J4731_15230;product=chorismate synthase;pseudo=true;transl_table=11
JAGETS010000031.1	Genbank	pseudogene	19381	20179	.	+	.	ID=gene-J4731_15235;Name=J4731_15235;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_15235;pseudo=true
JAGETS010000031.1	Protein Homology	CDS	19381	20179	.	+	0	ID=cds-J4731_15235;Parent=gene-J4731_15235;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004250674.1;locus_tag=J4731_15235;product=TSUP family transporter;pseudo=true;transl_table=11
JAGETS010000031.1	Genbank	pseudogene	20197	20753	.	+	.	ID=gene-J4731_15240;Name=J4731_15240;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_15240;pseudo=true
JAGETS010000031.1	Protein Homology	CDS	20197	20753	.	+	0	ID=cds-J4731_15240;Parent=gene-J4731_15240;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004388548.1;locus_tag=J4731_15240;product=elongation factor P hydroxylase;pseudo=true;transl_table=11
JAGETS010000031.1	Genbank	gene	20763	21035	.	+	.	ID=gene-J4731_15245;Name=J4731_15245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_15245
JAGETS010000031.1	Protein Homology	CDS	20763	21035	.	+	0	ID=cds-MBO1929329.1;Parent=gene-J4731_15245;Dbxref=NCBI_GP:MBO1929329.1;Name=MBO1929329.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209715.1;locus_tag=J4731_15245;product=YfcL family protein;protein_id=MBO1929329.1;transl_table=11
JAGETS010000031.1	Genbank	pseudogene	21075	21615	.	+	.	ID=gene-J4731_15250;Name=J4731_15250;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_15250;pseudo=true
JAGETS010000031.1	Protein Homology	CDS	21075	21615	.	+	0	ID=cds-J4731_15250;Parent=gene-J4731_15250;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004921217.1;locus_tag=J4731_15250;product=GNAT family N-acetyltransferase;pseudo=true;transl_table=11
JAGETS010000031.1	Genbank	pseudogene	21620	23637	.	-	.	ID=gene-J4731_15255;Name=mnmC;gbkey=Gene;gene=mnmC;gene_biotype=pseudogene;locus_tag=J4731_15255;pseudo=true
JAGETS010000031.1	Protein Homology	CDS	21620	23637	.	-	0	ID=cds-J4731_15255;Parent=gene-J4731_15255;Note=frameshifted%3B internal stop;gbkey=CDS;gene=mnmC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209716.1;locus_tag=J4731_15255;product=bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC;pseudo=true;transl_table=11
JAGETS010000031.1	Genbank	pseudogene	23838	25047	.	+	.	ID=gene-J4731_15260;Name=fabB;gbkey=Gene;gene=fabB;gene_biotype=pseudogene;locus_tag=J4731_15260;pseudo=true
JAGETS010000031.1	Protein Homology	CDS	23838	25047	.	+	0	ID=cds-J4731_15260;Parent=gene-J4731_15260;Note=frameshifted;gbkey=CDS;gene=fabB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228082.1;locus_tag=J4731_15260;product=beta-ketoacyl-ACP synthase I;pseudo=true;transl_table=11
JAGETS010000031.1	Genbank	gene	25101	25376	.	-	.	ID=gene-J4731_15265;Name=J4731_15265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_15265
JAGETS010000031.1	GeneMarkS-2+	CDS	25101	25376	.	-	0	ID=cds-MBO1929330.1;Parent=gene-J4731_15265;Dbxref=NCBI_GP:MBO1929330.1;Name=MBO1929330.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_15265;product=hypothetical protein;protein_id=MBO1929330.1;transl_table=11
JAGETS010000031.1	Genbank	pseudogene	26067	27542	.	-	.	ID=gene-J4731_15270;Name=J4731_15270;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_15270;pseudo=true
JAGETS010000031.1	Protein Homology	CDS	26067	27542	.	-	0	ID=cds-J4731_15270;Parent=gene-J4731_15270;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005189691.1;locus_tag=J4731_15270;product=tripartite tricarboxylate transporter permease;pseudo=true;transl_table=11
JAGETS010000031.1	Genbank	pseudogene	27542	27975	.	-	.	ID=gene-J4731_15275;Name=J4731_15275;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_15275;pseudo=true
JAGETS010000031.1	Protein Homology	CDS	27542	27975	.	-	0	ID=cds-J4731_15275;Parent=gene-J4731_15275;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006815571.1;locus_tag=J4731_15275;product=tripartite tricarboxylate transporter TctB family protein;pseudo=true;transl_table=11
JAGETS010000031.1	Genbank	gene	27995	28168	.	-	.	ID=gene-J4731_15280;Name=J4731_15280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_15280
JAGETS010000031.1	GeneMarkS-2+	CDS	27995	28168	.	-	0	ID=cds-MBO1929331.1;Parent=gene-J4731_15280;Dbxref=NCBI_GP:MBO1929331.1;Name=MBO1929331.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_15280;product=hypothetical protein;protein_id=MBO1929331.1;transl_table=11
JAGETS010000031.1	Genbank	gene	28162	28596	.	-	.	ID=gene-J4731_15285;Name=J4731_15285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_15285
JAGETS010000031.1	Protein Homology	CDS	28162	28596	.	-	0	ID=cds-MBO1929332.1;Parent=gene-J4731_15285;Dbxref=NCBI_GP:MBO1929332.1;Name=MBO1929332.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015366.1;locus_tag=J4731_15285;product=hypothetical protein;protein_id=MBO1929332.1;transl_table=11
JAGETS010000031.1	Genbank	gene	28575	28760	.	-	.	ID=gene-J4731_15290;Name=J4731_15290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_15290
JAGETS010000031.1	GeneMarkS-2+	CDS	28575	28760	.	-	0	ID=cds-MBO1929333.1;Parent=gene-J4731_15290;Dbxref=NCBI_GP:MBO1929333.1;Name=MBO1929333.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_15290;product=hypothetical protein;protein_id=MBO1929333.1;transl_table=11
JAGETS010000031.1	Genbank	pseudogene	29250	29861	.	+	.	ID=gene-J4731_15295;Name=J4731_15295;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_15295;pseudo=true
JAGETS010000031.1	Protein Homology	CDS	29250	29861	.	+	0	ID=cds-J4731_15295;Parent=gene-J4731_15295;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015833590.1;locus_tag=J4731_15295;product=response regulator;pseudo=true;transl_table=11
JAGETS010000031.1	Genbank	pseudogene	29909	31323	.	+	.	ID=gene-J4731_15300;Name=J4731_15300;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_15300;pseudo=true
JAGETS010000031.1	Protein Homology	CDS	29909	31323	.	+	0	ID=cds-J4731_15300;Parent=gene-J4731_15300;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004257250.1;locus_tag=J4731_15300;product=sensor histidine kinase N-terminal domain-containing protein;pseudo=true;transl_table=11
JAGETS010000031.1	Genbank	gene	31396	31701	.	-	.	ID=gene-J4731_15305;Name=J4731_15305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_15305
JAGETS010000031.1	GeneMarkS-2+	CDS	31396	31701	.	-	0	ID=cds-MBO1929334.1;Parent=gene-J4731_15305;Dbxref=NCBI_GP:MBO1929334.1;Name=MBO1929334.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_15305;product=hypothetical protein;protein_id=MBO1929334.1;transl_table=11
JAGETS010000031.1	Genbank	gene	32367	32570	.	+	.	ID=gene-J4731_15310;Name=J4731_15310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_15310
JAGETS010000031.1	GeneMarkS-2+	CDS	32367	32570	.	+	0	ID=cds-MBO1929335.1;Parent=gene-J4731_15310;Dbxref=NCBI_GP:MBO1929335.1;Name=MBO1929335.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_15310;product=hypothetical protein;protein_id=MBO1929335.1;transl_table=11
JAGETS010000031.1	Genbank	gene	33573	33794	.	-	.	ID=gene-J4731_15315;Name=J4731_15315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_15315
JAGETS010000031.1	GeneMarkS-2+	CDS	33573	33794	.	-	0	ID=cds-MBO1929336.1;Parent=gene-J4731_15315;Dbxref=NCBI_GP:MBO1929336.1;Name=MBO1929336.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_15315;product=hypothetical protein;protein_id=MBO1929336.1;transl_table=11
JAGETS010000031.1	Genbank	gene	34932	35084	.	-	.	ID=gene-J4731_15320;Name=J4731_15320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_15320
JAGETS010000031.1	Protein Homology	CDS	34932	35084	.	-	0	ID=cds-MBO1929337.1;Parent=gene-J4731_15320;Dbxref=NCBI_GP:MBO1929337.1;Name=MBO1929337.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019843.1;locus_tag=J4731_15320;product=SEL1-like repeat protein;protein_id=MBO1929337.1;transl_table=11
JAGETS010000031.1	Genbank	gene	35460	35654	.	-	.	ID=gene-J4731_15325;Name=J4731_15325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_15325
JAGETS010000031.1	GeneMarkS-2+	CDS	35460	35654	.	-	0	ID=cds-MBO1929338.1;Parent=gene-J4731_15325;Dbxref=NCBI_GP:MBO1929338.1;Name=MBO1929338.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_15325;product=hypothetical protein;protein_id=MBO1929338.1;transl_table=11
JAGETS010000031.1	Genbank	gene	35636	35857	.	-	.	ID=gene-J4731_15330;Name=J4731_15330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_15330
JAGETS010000031.1	GeneMarkS-2+	CDS	35636	35857	.	-	0	ID=cds-MBO1929339.1;Parent=gene-J4731_15330;Dbxref=NCBI_GP:MBO1929339.1;Name=MBO1929339.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_15330;product=hypothetical protein;protein_id=MBO1929339.1;transl_table=11
JAGETS010000031.1	Genbank	gene	35981	36136	.	-	.	ID=gene-J4731_15335;Name=J4731_15335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_15335
JAGETS010000031.1	GeneMarkS-2+	CDS	35981	36136	.	-	0	ID=cds-MBO1929340.1;Parent=gene-J4731_15335;Dbxref=NCBI_GP:MBO1929340.1;Name=MBO1929340.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_15335;product=hypothetical protein;protein_id=MBO1929340.1;transl_table=11
JAGETS010000031.1	Genbank	gene	36317	36466	.	-	.	ID=gene-J4731_15340;Name=J4731_15340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_15340
JAGETS010000031.1	GeneMarkS-2+	CDS	36317	36466	.	-	0	ID=cds-MBO1929341.1;Parent=gene-J4731_15340;Dbxref=NCBI_GP:MBO1929341.1;Name=MBO1929341.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_15340;product=hypothetical protein;protein_id=MBO1929341.1;transl_table=11
JAGETS010000031.1	Genbank	gene	36456	36659	.	-	.	ID=gene-J4731_15345;Name=J4731_15345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_15345
JAGETS010000031.1	Protein Homology	CDS	36456	36659	.	-	0	ID=cds-MBO1929342.1;Parent=gene-J4731_15345;Dbxref=NCBI_GP:MBO1929342.1;Name=MBO1929342.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019843.1;locus_tag=J4731_15345;product=SEL1-like repeat protein;protein_id=MBO1929342.1;transl_table=11
JAGETS010000031.1	Genbank	gene	36847	37005	.	-	.	ID=gene-J4731_15350;Name=J4731_15350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_15350
JAGETS010000031.1	GeneMarkS-2+	CDS	36847	37005	.	-	0	ID=cds-MBO1929343.1;Parent=gene-J4731_15350;Dbxref=NCBI_GP:MBO1929343.1;Name=MBO1929343.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_15350;product=hypothetical protein;protein_id=MBO1929343.1;transl_table=11
JAGETS010000031.1	Genbank	gene	37335	37556	.	-	.	ID=gene-J4731_15355;Name=J4731_15355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_15355
JAGETS010000031.1	GeneMarkS-2+	CDS	37335	37556	.	-	0	ID=cds-MBO1929344.1;Parent=gene-J4731_15355;Dbxref=NCBI_GP:MBO1929344.1;Name=MBO1929344.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_15355;product=hypothetical protein;protein_id=MBO1929344.1;transl_table=11
JAGETS010000031.1	Genbank	gene	37598	37840	.	-	.	ID=gene-J4731_15360;Name=J4731_15360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_15360
JAGETS010000031.1	GeneMarkS-2+	CDS	37598	37840	.	-	0	ID=cds-MBO1929345.1;Parent=gene-J4731_15360;Dbxref=NCBI_GP:MBO1929345.1;Name=MBO1929345.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_15360;product=hypothetical protein;protein_id=MBO1929345.1;transl_table=11
JAGETS010000031.1	Genbank	gene	37945	38154	.	-	.	ID=gene-J4731_15365;Name=J4731_15365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_15365
JAGETS010000031.1	GeneMarkS-2+	CDS	37945	38154	.	-	0	ID=cds-MBO1929346.1;Parent=gene-J4731_15365;Dbxref=NCBI_GP:MBO1929346.1;Name=MBO1929346.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_15365;product=hypothetical protein;protein_id=MBO1929346.1;transl_table=11
JAGETS010000031.1	Genbank	gene	38237	38407	.	-	.	ID=gene-J4731_15370;Name=J4731_15370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_15370
JAGETS010000031.1	GeneMarkS-2+	CDS	38237	38407	.	-	0	ID=cds-MBO1929347.1;Parent=gene-J4731_15370;Dbxref=NCBI_GP:MBO1929347.1;Name=MBO1929347.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_15370;product=hypothetical protein;protein_id=MBO1929347.1;transl_table=11
JAGETS010000031.1	Genbank	gene	38476	38676	.	-	.	ID=gene-J4731_15375;Name=J4731_15375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_15375
JAGETS010000031.1	GeneMarkS-2+	CDS	38476	38676	.	-	0	ID=cds-MBO1929348.1;Parent=gene-J4731_15375;Dbxref=NCBI_GP:MBO1929348.1;Name=MBO1929348.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_15375;product=hypothetical protein;protein_id=MBO1929348.1;transl_table=11
JAGETS010000031.1	Genbank	gene	38721	39293	.	-	.	ID=gene-J4731_15380;Name=J4731_15380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_15380
JAGETS010000031.1	Protein Homology	CDS	38721	39293	.	-	0	ID=cds-MBO1929349.1;Parent=gene-J4731_15380;Dbxref=NCBI_GP:MBO1929349.1;Name=MBO1929349.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019843.1;locus_tag=J4731_15380;product=sel1 repeat family protein;protein_id=MBO1929349.1;transl_table=11
JAGETS010000031.1	Genbank	pseudogene	39789	40707	.	-	.	ID=gene-J4731_15385;Name=J4731_15385;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_15385;pseudo=true
JAGETS010000031.1	Protein Homology	CDS	39789	40707	.	-	0	ID=cds-J4731_15385;Parent=gene-J4731_15385;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014656279.1;locus_tag=J4731_15385;product=EamA family transporter;pseudo=true;transl_table=11
JAGETS010000031.1	Genbank	pseudogene	40867	41613	.	+	.	ID=gene-J4731_15390;Name=J4731_15390;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_15390;pseudo=true
JAGETS010000031.1	Protein Homology	CDS	40867	41613	.	+	0	ID=cds-J4731_15390;Parent=gene-J4731_15390;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002365513.1;locus_tag=J4731_15390;product=helix-turn-helix transcriptional regulator;pseudo=true;transl_table=11
JAGETS010000031.1	Genbank	pseudogene	41699	42820	.	+	.	ID=gene-J4731_15395;Name=J4731_15395;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_15395;pseudo=true
JAGETS010000031.1	Protein Homology	CDS	41699	42820	.	+	0	ID=cds-J4731_15395;Parent=gene-J4731_15395;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003854271.1;locus_tag=J4731_15395;product=DUF3410 domain-containing protein;pseudo=true;transl_table=11
JAGETS010000031.1	Genbank	pseudogene	42894	43896	.	+	.	ID=gene-J4731_15400;Name=J4731_15400;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_15400;pseudo=true
JAGETS010000031.1	Protein Homology	CDS	42894	43896	.	+	0	ID=cds-J4731_15400;Parent=gene-J4731_15400;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209726.1;locus_tag=J4731_15400;product=aspartate-semialdehyde dehydrogenase;pseudo=true;transl_table=11
JAGETS010000031.1	Genbank	pseudogene	43896	44701	.	+	.	ID=gene-J4731_15405;Name=truA;gbkey=Gene;gene=truA;gene_biotype=pseudogene;locus_tag=J4731_15405;pseudo=true
JAGETS010000031.1	Protein Homology	CDS	43896	44701	.	+	0	ID=cds-J4731_15405;Parent=gene-J4731_15405;Note=frameshifted;gbkey=CDS;gene=truA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006815562.1;locus_tag=J4731_15405;product=tRNA pseudouridine(38-40) synthase TruA;pseudo=true;transl_table=11
JAGETS010000031.1	Genbank	pseudogene	44772	45442	.	+	.	ID=gene-J4731_15410;Name=J4731_15410;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_15410;pseudo=true
JAGETS010000031.1	Protein Homology	CDS	44772	45442	.	+	0	ID=cds-J4731_15410;Parent=gene-J4731_15410;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006661352.1;locus_tag=J4731_15410;product=DedA family protein;pseudo=true;transl_table=11
JAGETS010000031.1	Genbank	pseudogene	45565	46517	.	+	.	ID=gene-J4731_15415;Name=accD;gbkey=Gene;gene=accD;gene_biotype=pseudogene;locus_tag=J4731_15415;pseudo=true
JAGETS010000031.1	Protein Homology	CDS	45565	46517	.	+	0	ID=cds-J4731_15415;Parent=gene-J4731_15415;Note=frameshifted;gbkey=CDS;gene=accD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004717883.1;locus_tag=J4731_15415;product=acetyl-CoA carboxylase%2C carboxyltransferase subunit beta;pseudo=true;transl_table=11
JAGETS010000031.1	Genbank	pseudogene	46517	47794	.	+	.	ID=gene-J4731_15420;Name=folC;gbkey=Gene;gene=folC;gene_biotype=pseudogene;locus_tag=J4731_15420;pseudo=true
JAGETS010000031.1	Protein Homology	CDS	46517	47794	.	+	0	ID=cds-J4731_15420;Parent=gene-J4731_15420;Note=frameshifted;gbkey=CDS;gene=folC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006661353.1;locus_tag=J4731_15420;product=bifunctional tetrahydrofolate synthase/dihydrofolate synthase;pseudo=true;transl_table=11
JAGETS010000031.1	Genbank	pseudogene	47800	48441	.	+	.	ID=gene-J4731_15425;Name=dedD;gbkey=Gene;gene=dedD;gene_biotype=pseudogene;locus_tag=J4731_15425;pseudo=true
JAGETS010000031.1	Protein Homology	CDS	47800	48441	.	+	0	ID=cds-J4731_15425;Parent=gene-J4731_15425;Note=internal stop;gbkey=CDS;gene=dedD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017827871.1;locus_tag=J4731_15425;product=cell division protein DedD;pseudo=true;transl_table=11
JAGETS010000031.1	Genbank	pseudogene	48618	49117	.	+	.	ID=gene-J4731_15430;Name=cvpA;gbkey=Gene;gene=cvpA;gene_biotype=pseudogene;locus_tag=J4731_15430;pseudo=true
JAGETS010000031.1	Protein Homology	CDS	48618	49117	.	+	0	ID=cds-J4731_15430;Parent=gene-J4731_15430;Note=frameshifted;gbkey=CDS;gene=cvpA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008910696.1;locus_tag=J4731_15430;product=colicin V production protein;pseudo=true;transl_table=11
JAGETS010000031.1	Genbank	pseudogene	49132	50630	.	+	.	ID=gene-J4731_15435;Name=purF;gbkey=Gene;gene=purF;gene_biotype=pseudogene;locus_tag=J4731_15435;pseudo=true
JAGETS010000031.1	Protein Homology	CDS	49132	50630	.	+	0	ID=cds-J4731_15435;Parent=gene-J4731_15435;Note=frameshifted;gbkey=CDS;gene=purF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006820991.1;locus_tag=J4731_15435;product=amidophosphoribosyltransferase;pseudo=true;transl_table=11
JAGETS010000031.1	Genbank	pseudogene	50950	51735	.	+	.	ID=gene-J4731_15440;Name=J4731_15440;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_15440;pseudo=true
JAGETS010000031.1	Protein Homology	CDS	50950	51735	.	+	0	ID=cds-J4731_15440;Parent=gene-J4731_15440;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004257311.1;locus_tag=J4731_15440;product=DUF1963 domain-containing protein;pseudo=true;transl_table=11
JAGETS010000031.1	Genbank	pseudogene	51924	52470	.	+	.	ID=gene-J4731_15445;Name=J4731_15445;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_15445;pseudo=true
JAGETS010000031.1	Protein Homology	CDS	51924	52470	.	+	0	ID=cds-J4731_15445;Parent=gene-J4731_15445;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017345413.1;locus_tag=J4731_15445;product=UbiX family flavin prenyltransferase;pseudo=true;transl_table=11
JAGETS010000031.1	Genbank	pseudogene	52474	53368	.	-	.	ID=gene-J4731_15450;Name=J4731_15450;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_15450;pseudo=true
JAGETS010000031.1	Protein Homology	CDS	52474	53368	.	-	0	ID=cds-J4731_15450;Parent=gene-J4731_15450;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014916039.1;locus_tag=J4731_15450;product=TIGR01777 family oxidoreductase;pseudo=true;transl_table=11
JAGETS010000031.1	Genbank	gene	53926	54432	.	+	.	ID=gene-J4731_15455;Name=yfcD;gbkey=Gene;gene=yfcD;gene_biotype=protein_coding;locus_tag=J4731_15455
JAGETS010000031.1	Protein Homology	CDS	53926	54432	.	+	0	ID=cds-MBO1929350.1;Parent=gene-J4731_15455;Dbxref=NCBI_GP:MBO1929350.1;Name=MBO1929350.1;gbkey=CDS;gene=yfcD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012146032.1;locus_tag=J4731_15455;product=NUDIX hydrolase YfcD;protein_id=MBO1929350.1;transl_table=11
JAGETS010000031.1	Genbank	pseudogene	54896	55869	.	+	.	ID=gene-J4731_15460;Name=J4731_15460;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_15460;pseudo=true
JAGETS010000031.1	Protein Homology	CDS	54896	55869	.	+	0	ID=cds-J4731_15460;Parent=gene-J4731_15460;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002228411.1;locus_tag=J4731_15460;product=M24 family metallopeptidase;pseudo=true;transl_table=11
JAGETS010000031.1	Genbank	pseudogene	55902	56098	.	+	.	ID=gene-J4731_15465;Name=J4731_15465;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_15465;pseudo=true
JAGETS010000031.1	Protein Homology	CDS	55902	56098	.	+	0	ID=cds-J4731_15465;Parent=gene-J4731_15465;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004257337.1;locus_tag=J4731_15465;product=DUF3311 domain-containing protein;pseudo=true;transl_table=11
JAGETS010000031.1	Genbank	pseudogene	56095	57480	.	+	.	ID=gene-J4731_15470;Name=J4731_15470;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_15470;pseudo=true
JAGETS010000031.1	Protein Homology	CDS	56095	57480	.	+	0	ID=cds-J4731_15470;Parent=gene-J4731_15470;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012413826.1;locus_tag=J4731_15470;product=sodium:solute symporter family protein;pseudo=true;transl_table=11
JAGETS010000031.1	Genbank	pseudogene	57508	59646	.	-	.	ID=gene-J4731_15475;Name=pta;gbkey=Gene;gene=pta;gene_biotype=pseudogene;locus_tag=J4731_15475;pseudo=true
JAGETS010000031.1	Protein Homology	CDS	57508	59646	.	-	0	ID=cds-J4731_15475;Parent=gene-J4731_15475;Note=frameshifted%3B internal stop;gbkey=CDS;gene=pta;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016537449.1;locus_tag=J4731_15475;product=phosphate acetyltransferase;pseudo=true;transl_table=11
JAGETS010000031.1	Genbank	pseudogene	59733	60929	.	-	.	ID=gene-J4731_15480;Name=J4731_15480;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_15480;pseudo=true
JAGETS010000031.1	Protein Homology	CDS	59733	60929	.	-	0	ID=cds-J4731_15480;Parent=gene-J4731_15480;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311207.1;locus_tag=J4731_15480;product=acetate kinase;pseudo=true;transl_table=11
JAGETS010000031.1	Genbank	pseudogene	61514	61979	.	+	.	ID=gene-J4731_15485;Name=J4731_15485;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_15485;pseudo=true
JAGETS010000031.1	Protein Homology	CDS	61514	61979	.	+	0	ID=cds-J4731_15485;Parent=gene-J4731_15485;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004243712.1;locus_tag=J4731_15485;product=DUF412 domain-containing protein;pseudo=true;transl_table=11
JAGETS010000031.1	Genbank	pseudogene	62101	62592	.	+	.	ID=gene-J4731_15490;Name=J4731_15490;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_15490;pseudo=true
JAGETS010000031.1	Protein Homology	CDS	62101	62592	.	+	0	ID=cds-J4731_15490;Parent=gene-J4731_15490;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007371080.1;locus_tag=J4731_15490;product=YfbU family protein;pseudo=true;transl_table=11
JAGETS010000031.1	Genbank	gene	63839	64033	.	-	.	ID=gene-J4731_15495;Name=J4731_15495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_15495
JAGETS010000031.1	GeneMarkS-2+	CDS	63839	64033	.	-	0	ID=cds-MBO1929351.1;Parent=gene-J4731_15495;Dbxref=NCBI_GP:MBO1929351.1;Name=MBO1929351.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_15495;product=hypothetical protein;protein_id=MBO1929351.1;transl_table=11
JAGETS010000031.1	Genbank	gene	64303	64563	.	-	.	ID=gene-J4731_15500;Name=J4731_15500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_15500
JAGETS010000031.1	GeneMarkS-2+	CDS	64303	64563	.	-	0	ID=cds-MBO1929352.1;Parent=gene-J4731_15500;Dbxref=NCBI_GP:MBO1929352.1;Name=MBO1929352.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_15500;product=hypothetical protein;protein_id=MBO1929352.1;transl_table=11
JAGETS010000031.1	Genbank	gene	64748	64978	.	-	.	ID=gene-J4731_15505;Name=J4731_15505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_15505
JAGETS010000031.1	GeneMarkS-2+	CDS	64748	64978	.	-	0	ID=cds-MBO1929353.1;Parent=gene-J4731_15505;Dbxref=NCBI_GP:MBO1929353.1;Name=MBO1929353.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_15505;product=hypothetical protein;protein_id=MBO1929353.1;transl_table=11
JAGETS010000031.1	Genbank	gene	65101	65301	.	-	.	ID=gene-J4731_15510;Name=J4731_15510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_15510
JAGETS010000031.1	GeneMarkS-2+	CDS	65101	65301	.	-	0	ID=cds-MBO1929354.1;Parent=gene-J4731_15510;Dbxref=NCBI_GP:MBO1929354.1;Name=MBO1929354.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_15510;product=hypothetical protein;protein_id=MBO1929354.1;transl_table=11
JAGETS010000031.1	Genbank	pseudogene	65439	65991	.	-	.	ID=gene-J4731_15515;Name=J4731_15515;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_15515;pseudo=true
JAGETS010000031.1	Protein Homology	CDS	65439	65991	.	-	0	ID=cds-J4731_15515;Parent=gene-J4731_15515;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014657054.1;locus_tag=J4731_15515;product=hypothetical protein;pseudo=true;transl_table=11
JAGETS010000031.1	Genbank	gene	66023	66226	.	-	.	ID=gene-J4731_15520;Name=J4731_15520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_15520
JAGETS010000031.1	Protein Homology	CDS	66023	66226	.	-	0	ID=cds-MBO1929355.1;Parent=gene-J4731_15520;Dbxref=NCBI_GP:MBO1929355.1;Name=MBO1929355.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017315.1;locus_tag=J4731_15520;product=PAAR domain-containing protein;protein_id=MBO1929355.1;transl_table=11
JAGETS010000031.1	Genbank	pseudogene	66255	67196	.	-	.	ID=gene-J4731_15525;Name=J4731_15525;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_15525;pseudo=true
JAGETS010000031.1	Protein Homology	CDS	66255	67196	.	-	0	ID=cds-J4731_15525;Parent=gene-J4731_15525;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012367456.1;locus_tag=J4731_15525;product=hypothetical protein;pseudo=true;transl_table=11
JAGETS010000031.1	Genbank	gene	67193	67441	.	-	.	ID=gene-J4731_15530;Name=J4731_15530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_15530
JAGETS010000031.1	GeneMarkS-2+	CDS	67193	67441	.	-	0	ID=cds-MBO1929356.1;Parent=gene-J4731_15530;Dbxref=NCBI_GP:MBO1929356.1;Name=MBO1929356.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_15530;product=hypothetical protein;protein_id=MBO1929356.1;transl_table=11
JAGETS010000031.1	Genbank	gene	67490	67774	.	-	.	ID=gene-J4731_15535;Name=J4731_15535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_15535
JAGETS010000031.1	GeneMarkS-2+	CDS	67490	67774	.	-	0	ID=cds-MBO1929357.1;Parent=gene-J4731_15535;Dbxref=NCBI_GP:MBO1929357.1;Name=MBO1929357.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_15535;product=hypothetical protein;protein_id=MBO1929357.1;transl_table=11
JAGETS010000031.1	Genbank	gene	67786	68004	.	-	.	ID=gene-J4731_15540;Name=J4731_15540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_15540
JAGETS010000031.1	GeneMarkS-2+	CDS	67786	68004	.	-	0	ID=cds-MBO1929358.1;Parent=gene-J4731_15540;Dbxref=NCBI_GP:MBO1929358.1;Name=MBO1929358.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_15540;product=hypothetical protein;protein_id=MBO1929358.1;transl_table=11
JAGETS010000031.1	Genbank	gene	67968	68156	.	-	.	ID=gene-J4731_15545;Name=J4731_15545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_15545
JAGETS010000031.1	GeneMarkS-2+	CDS	67968	68156	.	-	0	ID=cds-MBO1929359.1;Parent=gene-J4731_15545;Dbxref=NCBI_GP:MBO1929359.1;Name=MBO1929359.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_15545;product=hypothetical protein;protein_id=MBO1929359.1;transl_table=11
JAGETS010000031.1	Genbank	gene	68144	68698	.	-	.	ID=gene-J4731_15550;Name=J4731_15550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_15550
JAGETS010000031.1	GeneMarkS-2+	CDS	68144	68698	.	-	0	ID=cds-MBO1929360.1;Parent=gene-J4731_15550;Dbxref=NCBI_GP:MBO1929360.1;Name=MBO1929360.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_15550;product=hypothetical protein;protein_id=MBO1929360.1;transl_table=11
JAGETS010000031.1	Genbank	gene	68688	68915	.	-	.	ID=gene-J4731_15555;Name=J4731_15555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_15555
JAGETS010000031.1	GeneMarkS-2+	CDS	68688	68915	.	-	0	ID=cds-MBO1929361.1;Parent=gene-J4731_15555;Dbxref=NCBI_GP:MBO1929361.1;Name=MBO1929361.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_15555;product=hypothetical protein;protein_id=MBO1929361.1;transl_table=11
JAGETS010000031.1	Genbank	gene	68924	69097	.	-	.	ID=gene-J4731_15560;Name=J4731_15560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_15560
JAGETS010000031.1	GeneMarkS-2+	CDS	68924	69097	.	-	0	ID=cds-MBO1929362.1;Parent=gene-J4731_15560;Dbxref=NCBI_GP:MBO1929362.1;Name=MBO1929362.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_15560;product=hypothetical protein;protein_id=MBO1929362.1;transl_table=11
JAGETS010000031.1	Genbank	gene	69195	69353	.	-	.	ID=gene-J4731_15565;Name=J4731_15565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_15565
JAGETS010000031.1	GeneMarkS-2+	CDS	69195	69353	.	-	0	ID=cds-MBO1929363.1;Parent=gene-J4731_15565;Dbxref=NCBI_GP:MBO1929363.1;Name=MBO1929363.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_15565;product=hypothetical protein;protein_id=MBO1929363.1;transl_table=11
JAGETS010000031.1	Genbank	gene	69701	69844	.	-	.	ID=gene-J4731_15570;Name=J4731_15570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_15570
JAGETS010000031.1	GeneMarkS-2+	CDS	69701	69844	.	-	0	ID=cds-MBO1929364.1;Parent=gene-J4731_15570;Dbxref=NCBI_GP:MBO1929364.1;Name=MBO1929364.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_15570;product=hypothetical protein;protein_id=MBO1929364.1;transl_table=11
JAGETS010000031.1	Genbank	pseudogene	70361	71607	.	-	.	ID=gene-J4731_15575;Name=J4731_15575;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_15575;pseudo=true
JAGETS010000031.1	Protein Homology	CDS	70361	71607	.	-	0	ID=cds-J4731_15575;Parent=gene-J4731_15575;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012368580.1;locus_tag=J4731_15575;product=DUF4123 domain-containing protein;pseudo=true;transl_table=11
JAGETS010000031.1	Genbank	pseudogene	71599	73745	.	-	.	ID=gene-J4731_15580;Name=tssI;gbkey=Gene;gene=tssI;gene_biotype=pseudogene;locus_tag=J4731_15580;pseudo=true
JAGETS010000031.1	Protein Homology	CDS	71599	73745	.	-	0	ID=cds-J4731_15580;Parent=gene-J4731_15580;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;gene=tssI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004249010.1;locus_tag=J4731_15580;product=type VI secretion system tip protein VgrG;pseudo=true;transl_table=11
JAGETS010000031.1	Genbank	gene	73812	74330	.	-	.	ID=gene-J4731_15585;Name=J4731_15585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_15585
JAGETS010000031.1	Protein Homology	CDS	73812	74330	.	-	0	ID=cds-MBO1929365.1;Parent=gene-J4731_15585;Dbxref=NCBI_GP:MBO1929365.1;Name=MBO1929365.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006688108.1;locus_tag=J4731_15585;product=Hcp family type VI secretion system effector;protein_id=MBO1929365.1;transl_table=11
JAGETS010000031.1	Genbank	pseudogene	75066	75732	.	+	.	ID=gene-J4731_15590;Name=J4731_15590;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_15590;pseudo=true
JAGETS010000031.1	Protein Homology	CDS	75066	75732	.	+	0	ID=cds-J4731_15590;Parent=gene-J4731_15590;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006661360.1;locus_tag=J4731_15590;product=sugar phosphatase;pseudo=true;transl_table=11
JAGETS010000031.1	Genbank	pseudogene	75817	77640	.	+	.	ID=gene-J4731_15595;Name=J4731_15595;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_15595;pseudo=true
JAGETS010000031.1	Protein Homology	CDS	75817	77640	.	+	0	ID=cds-J4731_15595;Parent=gene-J4731_15595;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004259790.1;locus_tag=J4731_15595;product=SLC13 family permease;pseudo=true;transl_table=11
JAGETS010000031.1	Genbank	gene	77953	78219	.	+	.	ID=gene-J4731_15600;Name=J4731_15600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_15600
JAGETS010000031.1	GeneMarkS-2+	CDS	77953	78219	.	+	0	ID=cds-MBO1929366.1;Parent=gene-J4731_15600;Dbxref=NCBI_GP:MBO1929366.1;Name=MBO1929366.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_15600;product=hypothetical protein;protein_id=MBO1929366.1;transl_table=11
JAGETS010000031.1	Genbank	pseudogene	78227	78842	.	-	.	ID=gene-J4731_15605;Name=yfbR;gbkey=Gene;gene=yfbR;gene_biotype=pseudogene;locus_tag=J4731_15605;pseudo=true
JAGETS010000031.1	Protein Homology	CDS	78227	78842	.	-	0	ID=cds-J4731_15605;Parent=gene-J4731_15605;Note=frameshifted%3B internal stop;gbkey=CDS;gene=yfbR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013650180.1;locus_tag=J4731_15605;product=5'-deoxynucleotidase;pseudo=true;transl_table=11
JAGETS010000031.1	Genbank	pseudogene	79245	80454	.	-	.	ID=gene-J4731_15610;Name=J4731_15610;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_15610;pseudo=true
JAGETS010000031.1	Protein Homology	CDS	79245	80454	.	-	0	ID=cds-J4731_15610;Parent=gene-J4731_15610;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461273.1;locus_tag=J4731_15610;product=pyridoxal phosphate-dependent aminotransferase;pseudo=true;transl_table=11
JAGETS010000031.1	Genbank	pseudogene	81238	82126	.	+	.	ID=gene-J4731_15615;Name=J4731_15615;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_15615;pseudo=true
JAGETS010000031.1	Protein Homology	CDS	81238	82126	.	+	0	ID=cds-J4731_15615;Parent=gene-J4731_15615;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004235149.1;locus_tag=J4731_15615;product=LysR family transcriptional regulator;pseudo=true;transl_table=11
JAGETS010000031.1	Genbank	pseudogene	83255	83639	.	+	.	ID=gene-J4731_15620;Name=ndhC;gbkey=Gene;gene=ndhC;gene_biotype=pseudogene;locus_tag=J4731_15620;pseudo=true
JAGETS010000031.1	Protein Homology	CDS	83255	83639	.	+	0	ID=cds-J4731_15620;Parent=gene-J4731_15620;Note=frameshifted%3B internal stop;gbkey=CDS;gene=ndhC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011815937.1;locus_tag=J4731_15620;product=NADH-quinone oxidoreductase subunit A;pseudo=true;transl_table=11
JAGETS010000031.1	Genbank	pseudogene	83703	84370	.	+	.	ID=gene-J4731_15625;Name=J4731_15625;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_15625;pseudo=true
JAGETS010000031.1	Protein Homology	CDS	83703	84370	.	+	0	ID=cds-J4731_15625;Parent=gene-J4731_15625;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228044.1;locus_tag=J4731_15625;product=NADH-quinone oxidoreductase subunit B;pseudo=true;transl_table=11
JAGETS010000031.1	Genbank	pseudogene	84588	86213	.	+	.	ID=gene-J4731_15630;Name=nuoC;gbkey=Gene;gene=nuoC;gene_biotype=pseudogene;locus_tag=J4731_15630;pseudo=true
JAGETS010000031.1	Protein Homology	CDS	84588	86213	.	+	0	ID=cds-J4731_15630;Parent=gene-J4731_15630;Note=frameshifted%3B internal stop;gbkey=CDS;gene=nuoC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011053684.1;locus_tag=J4731_15630;product=NADH-quinone oxidoreductase subunit C/D;pseudo=true;transl_table=11
JAGETS010000031.1	Genbank	pseudogene	86216	86757	.	+	.	ID=gene-J4731_15635;Name=nuoE;gbkey=Gene;gene=nuoE;gene_biotype=pseudogene;locus_tag=J4731_15635;pseudo=true
JAGETS010000031.1	Protein Homology	CDS	86216	86757	.	+	0	ID=cds-J4731_15635;Parent=gene-J4731_15635;Note=frameshifted;gbkey=CDS;gene=nuoE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004921124.1;locus_tag=J4731_15635;product=NADH-quinone oxidoreductase subunit NuoE;pseudo=true;transl_table=11
JAGETS010000031.1	Genbank	pseudogene	86776	88020	.	+	.	ID=gene-J4731_15640;Name=nuoF;gbkey=Gene;gene=nuoF;gene_biotype=pseudogene;locus_tag=J4731_15640;pseudo=true
JAGETS010000031.1	Protein Homology	CDS	86776	88020	.	+	0	ID=cds-J4731_15640;Parent=gene-J4731_15640;Note=frameshifted%3B internal stop;gbkey=CDS;gene=nuoF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416787.1;locus_tag=J4731_15640;product=NADH-quinone oxidoreductase subunit NuoF;pseudo=true;transl_table=11
JAGETS010000031.1	Genbank	pseudogene	88171	90876	.	+	.	ID=gene-J4731_15645;Name=nuoG;gbkey=Gene;gene=nuoG;gene_biotype=pseudogene;locus_tag=J4731_15645;pseudo=true
JAGETS010000031.1	Protein Homology	CDS	88171	90876	.	+	0	ID=cds-J4731_15645;Parent=gene-J4731_15645;Note=frameshifted%3B internal stop;gbkey=CDS;gene=nuoG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014656261.1;locus_tag=J4731_15645;product=NADH-quinone oxidoreductase subunit NuoG;pseudo=true;transl_table=11
JAGETS010000031.1	Genbank	pseudogene	90899	91843	.	+	.	ID=gene-J4731_15650;Name=nuoH;gbkey=Gene;gene=nuoH;gene_biotype=pseudogene;locus_tag=J4731_15650;pseudo=true
JAGETS010000031.1	Protein Homology	CDS	90899	91843	.	+	0	ID=cds-J4731_15650;Parent=gene-J4731_15650;Note=frameshifted%3B internal stop;gbkey=CDS;gene=nuoH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013975480.1;locus_tag=J4731_15650;product=NADH-quinone oxidoreductase subunit NuoH;pseudo=true;transl_table=11
JAGETS010000031.1	Genbank	pseudogene	91858	92397	.	+	.	ID=gene-J4731_15655;Name=nuoI;gbkey=Gene;gene=nuoI;gene_biotype=pseudogene;locus_tag=J4731_15655;pseudo=true
JAGETS010000031.1	Protein Homology	CDS	91858	92397	.	+	0	ID=cds-J4731_15655;Parent=gene-J4731_15655;Note=frameshifted;gbkey=CDS;gene=nuoI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015959823.1;locus_tag=J4731_15655;product=NADH-quinone oxidoreductase subunit NuoI;pseudo=true;transl_table=11
JAGETS010000031.1	Genbank	pseudogene	92410	92948	.	+	.	ID=gene-J4731_15660;Name=nuoJ;gbkey=Gene;gene=nuoJ;gene_biotype=pseudogene;locus_tag=J4731_15660;pseudo=true
JAGETS010000031.1	Protein Homology	CDS	92410	92948	.	+	0	ID=cds-J4731_15660;Parent=gene-J4731_15660;Note=frameshifted;gbkey=CDS;gene=nuoJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004259837.1;locus_tag=J4731_15660;product=NADH-quinone oxidoreductase subunit J;pseudo=true;transl_table=11
JAGETS010000031.1	Genbank	pseudogene	92945	93243	.	+	.	ID=gene-J4731_15665;Name=nuoK;gbkey=Gene;gene=nuoK;gene_biotype=pseudogene;locus_tag=J4731_15665;pseudo=true
JAGETS010000031.1	Protein Homology	CDS	92945	93243	.	+	0	ID=cds-J4731_15665;Parent=gene-J4731_15665;Note=frameshifted;gbkey=CDS;gene=nuoK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006683663.1;locus_tag=J4731_15665;product=NADH-quinone oxidoreductase subunit NuoK;pseudo=true;transl_table=11
JAGETS010000031.1	Genbank	pseudogene	93240	95070	.	+	.	ID=gene-J4731_15670;Name=nuoL;gbkey=Gene;gene=nuoL;gene_biotype=pseudogene;locus_tag=J4731_15670;pseudo=true
JAGETS010000031.1	Protein Homology	CDS	93240	95070	.	+	0	ID=cds-J4731_15670;Parent=gene-J4731_15670;Note=frameshifted;gbkey=CDS;gene=nuoL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210270.1;locus_tag=J4731_15670;product=NADH-quinone oxidoreductase subunit L;pseudo=true;transl_table=11
JAGETS010000031.1	Genbank	pseudogene	95089	96602	.	+	.	ID=gene-J4731_15675;Name=nuoM;gbkey=Gene;gene=nuoM;gene_biotype=pseudogene;locus_tag=J4731_15675;pseudo=true
JAGETS010000031.1	Protein Homology	CDS	95089	96602	.	+	0	ID=cds-J4731_15675;Parent=gene-J4731_15675;Note=frameshifted;gbkey=CDS;gene=nuoM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004259848.1;locus_tag=J4731_15675;product=NADH-quinone oxidoreductase subunit M;pseudo=true;transl_table=11
JAGETS010000031.1	Genbank	pseudogene	96609	98059	.	+	.	ID=gene-J4731_15680;Name=nuoN;gbkey=Gene;gene=nuoN;gene_biotype=pseudogene;locus_tag=J4731_15680;pseudo=true
JAGETS010000031.1	Protein Homology	CDS	96609	98059	.	+	0	ID=cds-J4731_15680;Parent=gene-J4731_15680;Note=frameshifted;gbkey=CDS;gene=nuoN;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000156668.1;locus_tag=J4731_15680;product=NADH-quinone oxidoreductase subunit NuoN;pseudo=true;transl_table=11
JAGETS010000031.1	Genbank	pseudogene	98164	99089	.	-	.	ID=gene-J4731_15685;Name=J4731_15685;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_15685;pseudo=true
JAGETS010000031.1	Protein Homology	CDS	98164	99089	.	-	0	ID=cds-J4731_15685;Parent=gene-J4731_15685;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006660296.1;locus_tag=J4731_15685;product=alpha-xenorhabdolysin family binary toxin subunit B;pseudo=true;transl_table=11
JAGETS010000031.1	Genbank	gene	99555	99878	.	-	.	ID=gene-J4731_15690;Name=J4731_15690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_15690
JAGETS010000031.1	GeneMarkS-2+	CDS	99555	99878	.	-	0	ID=cds-MBO1929367.1;Parent=gene-J4731_15690;Dbxref=NCBI_GP:MBO1929367.1;Name=MBO1929367.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_15690;product=hypothetical protein;protein_id=MBO1929367.1;transl_table=11
JAGETS010000031.1	Genbank	gene	99959	100144	.	-	.	ID=gene-J4731_15695;Name=J4731_15695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_15695
JAGETS010000031.1	GeneMarkS-2+	CDS	99959	100144	.	-	0	ID=cds-MBO1929368.1;Parent=gene-J4731_15695;Dbxref=NCBI_GP:MBO1929368.1;Name=MBO1929368.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_15695;product=hypothetical protein;protein_id=MBO1929368.1;transl_table=11
JAGETS010000031.1	Genbank	pseudogene	101016	102313	.	+	.	ID=gene-J4731_15700;Name=J4731_15700;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_15700;pseudo=true
JAGETS010000031.1	Protein Homology	CDS	101016	102313	.	+	0	ID=cds-J4731_15700;Parent=gene-J4731_15700;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006661370.1;locus_tag=J4731_15700;product=isochorismate synthase;pseudo=true;transl_table=11
JAGETS010000031.1	Genbank	pseudogene	102432	104089	.	+	.	ID=gene-J4731_15705;Name=menD;gbkey=Gene;gene=menD;gene_biotype=pseudogene;locus_tag=J4731_15705;pseudo=true
JAGETS010000031.1	Protein Homology	CDS	102432	104089	.	+	0	ID=cds-J4731_15705;Parent=gene-J4731_15705;Note=frameshifted;gbkey=CDS;gene=menD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015833680.1;locus_tag=J4731_15705;product=2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase;pseudo=true;transl_table=11
JAGETS010000031.1	Genbank	pseudogene	104089	104852	.	+	.	ID=gene-J4731_15710;Name=menH;gbkey=Gene;gene=menH;gene_biotype=pseudogene;locus_tag=J4731_15710;pseudo=true
JAGETS010000031.1	Protein Homology	CDS	104089	104852	.	+	0	ID=cds-J4731_15710;Parent=gene-J4731_15710;Note=frameshifted;gbkey=CDS;gene=menH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014656254.1;locus_tag=J4731_15710;product=2-succinyl-6-hydroxy-2%2C4-cyclohexadiene-1-carboxylate synthase;pseudo=true;transl_table=11
JAGETS010000031.1	Genbank	pseudogene	104865	105717	.	+	.	ID=gene-J4731_15715;Name=menB;gbkey=Gene;gene=menB;gene_biotype=pseudogene;locus_tag=J4731_15715;pseudo=true
JAGETS010000031.1	Protein Homology	CDS	104865	105717	.	+	0	ID=cds-J4731_15715;Parent=gene-J4731_15715;Note=frameshifted;gbkey=CDS;gene=menB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001641973.1;locus_tag=J4731_15715;product=1%2C4-dihydroxy-2-naphthoyl-CoA synthase;pseudo=true;transl_table=11
JAGETS010000031.1	Genbank	pseudogene	105717	106685	.	+	.	ID=gene-J4731_15720;Name=menC;gbkey=Gene;gene=menC;gene_biotype=pseudogene;locus_tag=J4731_15720;pseudo=true
JAGETS010000031.1	Protein Homology	CDS	105717	106685	.	+	0	ID=cds-J4731_15720;Parent=gene-J4731_15720;Note=frameshifted;gbkey=CDS;gene=menC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006815519.1;locus_tag=J4731_15720;product=o-succinylbenzoate synthase;pseudo=true;transl_table=11
JAGETS010000031.1	Genbank	pseudogene	106673	108074	.	+	.	ID=gene-J4731_15725;Name=menE;gbkey=Gene;gene=menE;gene_biotype=pseudogene;locus_tag=J4731_15725;pseudo=true
JAGETS010000031.1	Protein Homology	CDS	106673	108074	.	+	0	ID=cds-J4731_15725;Parent=gene-J4731_15725;Note=frameshifted;gbkey=CDS;gene=menE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004259868.1;locus_tag=J4731_15725;product=o-succinylbenzoate--CoA ligase;pseudo=true;transl_table=11
JAGETS010000031.1	Genbank	pseudogene	108132	109537	.	-	.	ID=gene-J4731_15730;Name=J4731_15730;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_15730;pseudo=true
JAGETS010000031.1	Protein Homology	CDS	108132	109537	.	-	0	ID=cds-J4731_15730;Parent=gene-J4731_15730;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004248382.1;locus_tag=J4731_15730;product=catalase;pseudo=true;transl_table=11
JAGETS010000031.1	Genbank	pseudogene	109867	110405	.	+	.	ID=gene-J4731_15735;Name=J4731_15735;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_15735;pseudo=true
JAGETS010000031.1	Protein Homology	CDS	109867	110405	.	+	0	ID=cds-J4731_15735;Parent=gene-J4731_15735;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004248380.1;locus_tag=J4731_15735;product=porin;pseudo=true;transl_table=11
JAGETS010000031.1	Genbank	pseudogene	110523	111732	.	-	.	ID=gene-J4731_15740;Name=tyrP;gbkey=Gene;gene=tyrP;gene_biotype=pseudogene;locus_tag=J4731_15740;pseudo=true
JAGETS010000031.1	Protein Homology	CDS	110523	111732	.	-	0	ID=cds-J4731_15740;Parent=gene-J4731_15740;Note=frameshifted;gbkey=CDS;gene=tyrP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002221775.1;locus_tag=J4731_15740;product=tyrosine transporter TyrP;pseudo=true;transl_table=11
JAGETS010000031.1	Genbank	pseudogene	112141	113266	.	+	.	ID=gene-J4731_15745;Name=J4731_15745;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_15745;pseudo=true
JAGETS010000031.1	Protein Homology	CDS	112141	113266	.	+	0	ID=cds-J4731_15745;Parent=gene-J4731_15745;Note=frameshifted%3B internal stop%3B incomplete%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313132.1;locus_tag=J4731_15745;product=anaerobic C4-dicarboxylate transporter;pseudo=true;transl_table=11
##sequence-region JAGETS010000032.1 1 84359
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=587
JAGETS010000032.1	Genbank	region	1	84359	.	+	.	ID=JAGETS010000032.1:1..84359;Dbxref=taxon:587;collected-by=NHLS;collection-date=2018;country=South Africa: Pretoria;gbkey=Src;isolation-source=stool;lat-lon=25.7479 S 28.2293 E;mol_type=genomic DNA;nat-host=porcine;strain=SG003
JAGETS010000032.1	Genbank	pseudogene	90	1248	.	-	.	ID=gene-J4731_15750;Name=J4731_15750;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_15750;pseudo=true
JAGETS010000032.1	Protein Homology	CDS	90	1248	.	-	0	ID=cds-J4731_15750;Parent=gene-J4731_15750;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008815741.1;locus_tag=J4731_15750;product=mannitol-1-phosphate 5-dehydrogenase;pseudo=true;transl_table=11
JAGETS010000032.1	Genbank	pseudogene	1260	1720	.	-	.	ID=gene-J4731_15755;Name=J4731_15755;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_15755;pseudo=true
JAGETS010000032.1	Protein Homology	CDS	1260	1720	.	-	0	ID=cds-J4731_15755;Parent=gene-J4731_15755;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014542794.1;locus_tag=J4731_15755;product=PTS sugar transporter subunit IIA;pseudo=true;transl_table=11
JAGETS010000032.1	Genbank	pseudogene	1833	3185	.	-	.	ID=gene-J4731_15760;Name=J4731_15760;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_15760;pseudo=true
JAGETS010000032.1	Protein Homology	CDS	1833	3185	.	-	0	ID=cds-J4731_15760;Parent=gene-J4731_15760;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012882812.1;locus_tag=J4731_15760;product=PTS mannitol transporter subunit IICBA;pseudo=true;transl_table=11
JAGETS010000032.1	Genbank	pseudogene	3718	4946	.	+	.	ID=gene-J4731_15765;Name=J4731_15765;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_15765;pseudo=true
JAGETS010000032.1	Protein Homology	CDS	3718	4946	.	+	0	ID=cds-J4731_15765;Parent=gene-J4731_15765;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006660217.1;locus_tag=J4731_15765;product=transporter;pseudo=true;transl_table=11
JAGETS010000032.1	Genbank	pseudogene	5013	5729	.	-	.	ID=gene-J4731_15770;Name=J4731_15770;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_15770;pseudo=true
JAGETS010000032.1	Protein Homology	CDS	5013	5729	.	-	0	ID=cds-J4731_15770;Parent=gene-J4731_15770;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014656299.1;locus_tag=J4731_15770;product=cyclase family protein;pseudo=true;transl_table=11
JAGETS010000032.1	Genbank	pseudogene	5965	6766	.	-	.	ID=gene-J4731_15775;Name=J4731_15775;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_15775;pseudo=true
JAGETS010000032.1	Protein Homology	CDS	5965	6766	.	-	0	ID=cds-J4731_15775;Parent=gene-J4731_15775;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006661326.1;locus_tag=J4731_15775;product=methionine ABC transporter substrate-binding protein;pseudo=true;transl_table=11
JAGETS010000032.1	Genbank	pseudogene	6992	8103	.	+	.	ID=gene-J4731_15780;Name=J4731_15780;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_15780;pseudo=true
JAGETS010000032.1	Protein Homology	CDS	6992	8103	.	+	0	ID=cds-J4731_15780;Parent=gene-J4731_15780;Note=This protein belongs to a clade of uncharacterized proteins related to peroxidases such as the alkylhydroperoxidase AhpD.%3B frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004264858.1;locus_tag=J4731_15780;product=peroxidase-related enzyme;pseudo=true;transl_table=11
JAGETS010000032.1	Genbank	pseudogene	8108	9552	.	+	.	ID=gene-J4731_15785;Name=J4731_15785;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_15785;pseudo=true
JAGETS010000032.1	Protein Homology	CDS	8108	9552	.	+	0	ID=cds-J4731_15785;Parent=gene-J4731_15785;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006660213.1;locus_tag=J4731_15785;product=NAD(P)/FAD-dependent oxidoreductase;pseudo=true;transl_table=11
JAGETS010000032.1	Genbank	pseudogene	9556	10594	.	+	.	ID=gene-J4731_15790;Name=J4731_15790;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_15790;pseudo=true
JAGETS010000032.1	Protein Homology	CDS	9556	10594	.	+	0	ID=cds-J4731_15790;Parent=gene-J4731_15790;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003242531.1;locus_tag=J4731_15790;product=ATP-binding cassette domain-containing protein;pseudo=true;transl_table=11
JAGETS010000032.1	Genbank	pseudogene	10560	11234	.	+	.	ID=gene-J4731_15795;Name=J4731_15795;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_15795;pseudo=true
JAGETS010000032.1	Protein Homology	CDS	10560	11234	.	+	0	ID=cds-J4731_15795;Parent=gene-J4731_15795;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014656304.1;locus_tag=J4731_15795;product=ABC transporter permease;pseudo=true;transl_table=11
JAGETS010000032.1	Genbank	pseudogene	11707	13298	.	+	.	ID=gene-J4731_15800;Name=J4731_15800;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_15800;pseudo=true
JAGETS010000032.1	Protein Homology	CDS	11707	13298	.	+	0	ID=cds-J4731_15800;Parent=gene-J4731_15800;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004921290.1;locus_tag=J4731_15800;product=potassium/proton antiporter;pseudo=true;transl_table=11
JAGETS010000032.1	Genbank	gene	15393	15468	.	-	.	ID=gene-J4731_15805;Name=J4731_15805;gbkey=Gene;gene_biotype=tRNA;locus_tag=J4731_15805
JAGETS010000032.1	tRNAscan-SE	tRNA	15393	15468	.	-	.	ID=rna-J4731_15805;Parent=gene-J4731_15805;anticodon=(pos:complement(15433..15435));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=J4731_15805;product=tRNA-Lys
JAGETS010000032.1	tRNAscan-SE	exon	15393	15468	.	-	.	ID=exon-J4731_15805-1;Parent=rna-J4731_15805;anticodon=(pos:complement(15433..15435));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=J4731_15805;product=tRNA-Lys
JAGETS010000032.1	Genbank	gene	15500	15576	.	-	.	ID=gene-J4731_15810;Name=J4731_15810;gbkey=Gene;gene_biotype=tRNA;locus_tag=J4731_15810
JAGETS010000032.1	tRNAscan-SE	tRNA	15500	15576	.	-	.	ID=rna-J4731_15810;Parent=gene-J4731_15810;anticodon=(pos:complement(15541..15543));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=J4731_15810;product=tRNA-Lys
JAGETS010000032.1	tRNAscan-SE	exon	15500	15576	.	-	.	ID=exon-J4731_15810-1;Parent=rna-J4731_15810;anticodon=(pos:complement(15541..15543));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=J4731_15810;product=tRNA-Lys
JAGETS010000032.1	Genbank	gene	15613	15687	.	-	.	ID=gene-J4731_15815;Name=J4731_15815;gbkey=Gene;gene_biotype=tRNA;locus_tag=J4731_15815
JAGETS010000032.1	tRNAscan-SE	tRNA	15613	15687	.	-	.	ID=rna-J4731_15815;Parent=gene-J4731_15815;gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=J4731_15815;product=tRNA-OTHER
JAGETS010000032.1	tRNAscan-SE	exon	15613	15687	.	-	.	ID=exon-J4731_15815-1;Parent=rna-J4731_15815;gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=J4731_15815;product=tRNA-OTHER
JAGETS010000032.1	Genbank	gene	15712	15787	.	-	.	ID=gene-J4731_15820;Name=J4731_15820;gbkey=Gene;gene_biotype=tRNA;locus_tag=J4731_15820
JAGETS010000032.1	tRNAscan-SE	tRNA	15712	15787	.	-	.	ID=rna-J4731_15820;Parent=gene-J4731_15820;anticodon=(pos:complement(15752..15754));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=J4731_15820;product=tRNA-Val
JAGETS010000032.1	tRNAscan-SE	exon	15712	15787	.	-	.	ID=exon-J4731_15820-1;Parent=rna-J4731_15820;anticodon=(pos:complement(15752..15754));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=J4731_15820;product=tRNA-Val
JAGETS010000032.1	Genbank	gene	16206	17363	.	+	.	ID=gene-J4731_15825;Name=gltX;gbkey=Gene;gene=gltX;gene_biotype=protein_coding;locus_tag=J4731_15825
JAGETS010000032.1	Protein Homology	CDS	16206	17363	.	+	0	ID=cds-MBO1929369.1;Parent=gene-J4731_15825;Dbxref=NCBI_GP:MBO1929369.1;Name=MBO1929369.1;gbkey=CDS;gene=gltX;inference=COORDINATES: protein motif:HMM:NF002390.0;locus_tag=J4731_15825;product=glutamate--tRNA ligase;protein_id=MBO1929369.1;transl_table=11
JAGETS010000032.1	Genbank	pseudogene	17336	17614	.	+	.	ID=gene-J4731_15830;Name=J4731_15830;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_15830;pseudo=true
JAGETS010000032.1	Protein Homology	CDS	17336	17614	.	+	0	ID=cds-J4731_15830;Parent=gene-J4731_15830;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007869787.1;locus_tag=J4731_15830;product=hypothetical protein;pseudo=true;transl_table=11
JAGETS010000032.1	Genbank	gene	17790	17865	.	+	.	ID=gene-J4731_15835;Name=J4731_15835;gbkey=Gene;gene_biotype=tRNA;locus_tag=J4731_15835
JAGETS010000032.1	tRNAscan-SE	tRNA	17790	17865	.	+	.	ID=rna-J4731_15835;Parent=gene-J4731_15835;anticodon=(pos:17823..17825);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=J4731_15835;product=tRNA-Ala
JAGETS010000032.1	tRNAscan-SE	exon	17790	17865	.	+	.	ID=exon-J4731_15835-1;Parent=rna-J4731_15835;anticodon=(pos:17823..17825);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=J4731_15835;product=tRNA-Ala
JAGETS010000032.1	Genbank	gene	17907	17981	.	+	.	ID=gene-J4731_15840;Name=J4731_15840;gbkey=Gene;gene_biotype=tRNA;locus_tag=J4731_15840
JAGETS010000032.1	tRNAscan-SE	tRNA	17907	17981	.	+	.	ID=rna-J4731_15840;Parent=gene-J4731_15840;anticodon=(pos:17940..17942);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=J4731_15840;product=tRNA-Ala
JAGETS010000032.1	tRNAscan-SE	exon	17907	17981	.	+	.	ID=exon-J4731_15840-1;Parent=rna-J4731_15840;anticodon=(pos:17940..17942);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=J4731_15840;product=tRNA-Ala
JAGETS010000032.1	Genbank	pseudogene	18051	18794	.	-	.	ID=gene-J4731_15845;Name=J4731_15845;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_15845;pseudo=true
JAGETS010000032.1	Protein Homology	CDS	18051	18794	.	-	0	ID=cds-J4731_15845;Parent=gene-J4731_15845;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016928658.1;locus_tag=J4731_15845;product=SDR family oxidoreductase;pseudo=true;transl_table=11
JAGETS010000032.1	Genbank	pseudogene	18915	19318	.	+	.	ID=gene-J4731_15850;Name=J4731_15850;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_15850;pseudo=true
JAGETS010000032.1	Protein Homology	CDS	18915	19318	.	+	0	ID=cds-J4731_15850;Parent=gene-J4731_15850;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004248417.1;locus_tag=J4731_15850;product=MarR family transcriptional regulator;pseudo=true;transl_table=11
JAGETS010000032.1	Genbank	gene	19326	19541	.	-	.	ID=gene-J4731_15855;Name=J4731_15855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_15855
JAGETS010000032.1	Protein Homology	CDS	19326	19541	.	-	0	ID=cds-MBO1929370.1;Parent=gene-J4731_15855;Dbxref=NCBI_GP:MBO1929370.1;Name=MBO1929370.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009111592.1;locus_tag=J4731_15855;product=DUF3820 family protein;protein_id=MBO1929370.1;transl_table=11
JAGETS010000032.1	Genbank	pseudogene	19621	20801	.	-	.	ID=gene-J4731_15860;Name=J4731_15860;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_15860;pseudo=true
JAGETS010000032.1	Protein Homology	CDS	19621	20801	.	-	0	ID=cds-J4731_15860;Parent=gene-J4731_15860;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000376337.1;locus_tag=J4731_15860;product=NupC/NupG family nucleoside CNT transporter;pseudo=true;transl_table=11
JAGETS010000032.1	Genbank	pseudogene	21079	23029	.	-	.	ID=gene-J4731_15865;Name=ligA;gbkey=Gene;gene=ligA;gene_biotype=pseudogene;locus_tag=J4731_15865;pseudo=true
JAGETS010000032.1	Protein Homology	CDS	21079	23029	.	-	0	ID=cds-J4731_15865;Parent=gene-J4731_15865;Note=frameshifted%3B internal stop;gbkey=CDS;gene=ligA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004248419.1;locus_tag=J4731_15865;product=NAD-dependent DNA ligase LigA;pseudo=true;transl_table=11
JAGETS010000032.1	Genbank	pseudogene	23084	24068	.	-	.	ID=gene-J4731_15870;Name=zipA;gbkey=Gene;gene=zipA;gene_biotype=pseudogene;locus_tag=J4731_15870;pseudo=true
JAGETS010000032.1	Protein Homology	CDS	23084	24068	.	-	0	ID=cds-J4731_15870;Parent=gene-J4731_15870;Note=frameshifted%3B internal stop;gbkey=CDS;gene=zipA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006658605.1;locus_tag=J4731_15870;product=cell division protein ZipA;pseudo=true;transl_table=11
JAGETS010000032.1	Genbank	pseudogene	24281	25028	.	+	.	ID=gene-J4731_15875;Name=cysZ;gbkey=Gene;gene=cysZ;gene_biotype=pseudogene;locus_tag=J4731_15875;pseudo=true
JAGETS010000032.1	Protein Homology	CDS	24281	25028	.	+	0	ID=cds-J4731_15875;Parent=gene-J4731_15875;Note=frameshifted;gbkey=CDS;gene=cysZ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006814666.1;locus_tag=J4731_15875;product=sulfate transporter CysZ;pseudo=true;transl_table=11
JAGETS010000032.1	Genbank	pseudogene	25255	26201	.	+	.	ID=gene-J4731_15880;Name=cysK;gbkey=Gene;gene=cysK;gene_biotype=pseudogene;locus_tag=J4731_15880;pseudo=true
JAGETS010000032.1	Protein Homology	CDS	25255	26201	.	+	0	ID=cds-J4731_15880;Parent=gene-J4731_15880;Note=frameshifted;gbkey=CDS;gene=cysK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003899275.1;locus_tag=J4731_15880;product=cysteine synthase A;pseudo=true;transl_table=11
JAGETS010000032.1	Genbank	pseudogene	26544	26796	.	+	.	ID=gene-J4731_15885;Name=ptsH;gbkey=Gene;gene=ptsH;gene_biotype=pseudogene;locus_tag=J4731_15885;pseudo=true
JAGETS010000032.1	Protein Homology	CDS	26544	26796	.	+	0	ID=cds-J4731_15885;Parent=gene-J4731_15885;Note=frameshifted;gbkey=CDS;gene=ptsH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003038086.1;locus_tag=J4731_15885;product=phosphocarrier protein Hpr;pseudo=true;transl_table=11
JAGETS010000032.1	Genbank	pseudogene	26953	28621	.	+	.	ID=gene-J4731_15890;Name=ptsI;gbkey=Gene;gene=ptsI;gene_biotype=pseudogene;locus_tag=J4731_15890;pseudo=true
JAGETS010000032.1	Protein Homology	CDS	26953	28621	.	+	0	ID=cds-J4731_15890;Parent=gene-J4731_15890;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;gene=ptsI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004921320.1;locus_tag=J4731_15890;product=phosphoenolpyruvate-protein phosphotransferase PtsI;pseudo=true;transl_table=11
JAGETS010000032.1	Genbank	gene	28800	29102	.	+	.	ID=gene-J4731_15895;Name=J4731_15895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_15895
JAGETS010000032.1	Protein Homology	CDS	28800	29102	.	+	0	ID=cds-MBO1929371.1;Parent=gene-J4731_15895;Dbxref=NCBI_GP:MBO1929371.1;Name=MBO1929371.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012578.1;locus_tag=J4731_15895;product=PTS glucose transporter subunit IIA;protein_id=MBO1929371.1;transl_table=11
JAGETS010000032.1	Genbank	pseudogene	29279	30156	.	-	.	ID=gene-J4731_15900;Name=cysM;gbkey=Gene;gene=cysM;gene_biotype=pseudogene;locus_tag=J4731_15900;pseudo=true
JAGETS010000032.1	Protein Homology	CDS	29279	30156	.	-	0	ID=cds-J4731_15900;Parent=gene-J4731_15900;Note=frameshifted%3B internal stop;gbkey=CDS;gene=cysM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006661316.1;locus_tag=J4731_15900;product=cysteine synthase CysM;pseudo=true;transl_table=11
JAGETS010000032.1	Genbank	pseudogene	30527	31592	.	-	.	ID=gene-J4731_15905;Name=cysA;gbkey=Gene;gene=cysA;gene_biotype=pseudogene;locus_tag=J4731_15905;pseudo=true
JAGETS010000032.1	Protein Homology	CDS	30527	31592	.	-	0	ID=cds-J4731_15905;Parent=gene-J4731_15905;Note=frameshifted%3B internal stop;gbkey=CDS;gene=cysA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015365491.1;locus_tag=J4731_15905;product=sulfate/thiosulfate ABC transporter ATP-binding protein CysA;pseudo=true;transl_table=11
JAGETS010000032.1	Genbank	pseudogene	31595	32381	.	-	.	ID=gene-J4731_15910;Name=cysW;gbkey=Gene;gene=cysW;gene_biotype=pseudogene;locus_tag=J4731_15910;pseudo=true
JAGETS010000032.1	Protein Homology	CDS	31595	32381	.	-	0	ID=cds-J4731_15910;Parent=gene-J4731_15910;Note=frameshifted;gbkey=CDS;gene=cysW;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010301376.1;locus_tag=J4731_15910;product=sulfate/thiosulfate ABC transporter permease CysW;pseudo=true;transl_table=11
JAGETS010000032.1	Genbank	pseudogene	32439	33243	.	-	.	ID=gene-J4731_15915;Name=cysT;gbkey=Gene;gene=cysT;gene_biotype=pseudogene;locus_tag=J4731_15915;pseudo=true
JAGETS010000032.1	Protein Homology	CDS	32439	33243	.	-	0	ID=cds-J4731_15915;Parent=gene-J4731_15915;Note=frameshifted;gbkey=CDS;gene=cysT;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013184914.1;locus_tag=J4731_15915;product=sulfate/thiosulfate ABC transporter permease CysT;pseudo=true;transl_table=11
JAGETS010000032.1	Genbank	pseudogene	33266	34281	.	-	.	ID=gene-J4731_15920;Name=J4731_15920;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_15920;pseudo=true
JAGETS010000032.1	Protein Homology	CDS	33266	34281	.	-	0	ID=cds-J4731_15920;Parent=gene-J4731_15920;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008910618.1;locus_tag=J4731_15920;product=sulfate ABC transporter substrate-binding protein;pseudo=true;transl_table=11
JAGETS010000032.1	Genbank	pseudogene	34819	35294	.	+	.	ID=gene-J4731_15925;Name=J4731_15925;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_15925;pseudo=true
JAGETS010000032.1	Protein Homology	CDS	34819	35294	.	+	0	ID=cds-J4731_15925;Parent=gene-J4731_15925;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002440805.1;locus_tag=J4731_15925;product=type II toxin-antitoxin system HicB family antitoxin;pseudo=true;transl_table=11
JAGETS010000032.1	Genbank	pseudogene	35295	36190	.	-	.	ID=gene-J4731_15930;Name=J4731_15930;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_15930;pseudo=true
JAGETS010000032.1	Protein Homology	CDS	35295	36190	.	-	0	ID=cds-J4731_15930;Parent=gene-J4731_15930;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001350538.1;locus_tag=J4731_15930;product=Dyp-type peroxidase;pseudo=true;transl_table=11
JAGETS010000032.1	Genbank	gene	36432	37037	.	-	.	ID=gene-J4731_15935;Name=J4731_15935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_15935
JAGETS010000032.1	Protein Homology	CDS	36432	37037	.	-	0	ID=cds-MBO1929372.1;Parent=gene-J4731_15935;Dbxref=NCBI_GP:MBO1929372.1;Name=MBO1929372.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006661312.1;locus_tag=J4731_15935;product=RpoE-regulated lipoprotein;protein_id=MBO1929372.1;transl_table=11
JAGETS010000032.1	Genbank	pseudogene	37129	37552	.	-	.	ID=gene-J4731_15940;Name=J4731_15940;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_15940;pseudo=true
JAGETS010000032.1	Protein Homology	CDS	37129	37552	.	-	0	ID=cds-J4731_15940;Parent=gene-J4731_15940;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014656314.1;locus_tag=J4731_15940;product=GNAT family acetyltransferase;pseudo=true;transl_table=11
JAGETS010000032.1	Genbank	pseudogene	37686	38595	.	+	.	ID=gene-J4731_15945;Name=hemF;gbkey=Gene;gene=hemF;gene_biotype=pseudogene;locus_tag=J4731_15945;pseudo=true
JAGETS010000032.1	Protein Homology	CDS	37686	38595	.	+	0	ID=cds-J4731_15945;Parent=gene-J4731_15945;Note=frameshifted;gbkey=CDS;gene=hemF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004264888.1;locus_tag=J4731_15945;product=oxygen-dependent coproporphyrinogen oxidase;pseudo=true;transl_table=11
JAGETS010000032.1	Genbank	pseudogene	38753	39879	.	+	.	ID=gene-J4731_15950;Name=J4731_15950;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_15950;pseudo=true
JAGETS010000032.1	Protein Homology	CDS	38753	39879	.	+	0	ID=cds-J4731_15950;Parent=gene-J4731_15950;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008910613.1;locus_tag=J4731_15950;product=M4 family metallopeptidase;pseudo=true;transl_table=11
JAGETS010000032.1	Genbank	pseudogene	39997	40839	.	-	.	ID=gene-J4731_15955;Name=rluF;gbkey=Gene;gene=rluF;gene_biotype=pseudogene;locus_tag=J4731_15955;pseudo=true
JAGETS010000032.1	Protein Homology	CDS	39997	40839	.	-	0	ID=cds-J4731_15955;Parent=gene-J4731_15955;Note=frameshifted;gbkey=CDS;gene=rluF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004721781.1;locus_tag=J4731_15955;product=23S rRNA pseudouridine(2604) synthase RluF;pseudo=true;transl_table=11
JAGETS010000032.1	Genbank	pseudogene	40995	42482	.	-	.	ID=gene-J4731_15960;Name=der;gbkey=Gene;gene=der;gene_biotype=pseudogene;locus_tag=J4731_15960;pseudo=true
JAGETS010000032.1	Protein Homology	CDS	40995	42482	.	-	0	ID=cds-J4731_15960;Parent=gene-J4731_15960;Note=frameshifted%3B internal stop;gbkey=CDS;gene=der;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015696260.1;locus_tag=J4731_15960;product=ribosome biogenesis GTPase Der;pseudo=true;transl_table=11
JAGETS010000032.1	Genbank	pseudogene	42609	43776	.	-	.	ID=gene-J4731_15965;Name=bamB;gbkey=Gene;gene=bamB;gene_biotype=pseudogene;locus_tag=J4731_15965;pseudo=true
JAGETS010000032.1	Protein Homology	CDS	42609	43776	.	-	0	ID=cds-J4731_15965;Parent=gene-J4731_15965;Note=frameshifted;gbkey=CDS;gene=bamB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013650286.1;locus_tag=J4731_15965;product=outer membrane protein assembly factor BamB;pseudo=true;transl_table=11
JAGETS010000032.1	Genbank	pseudogene	43797	44418	.	-	.	ID=gene-J4731_15970;Name=J4731_15970;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_15970;pseudo=true
JAGETS010000032.1	Protein Homology	CDS	43797	44418	.	-	0	ID=cds-J4731_15970;Parent=gene-J4731_15970;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006814684.1;locus_tag=J4731_15970;product=tetratricopeptide repeat protein;pseudo=true;transl_table=11
JAGETS010000032.1	Genbank	pseudogene	44429	45668	.	-	.	ID=gene-J4731_15975;Name=hisS;gbkey=Gene;gene=hisS;gene_biotype=pseudogene;locus_tag=J4731_15975;pseudo=true
JAGETS010000032.1	Protein Homology	CDS	44429	45668	.	-	0	ID=cds-J4731_15975;Parent=gene-J4731_15975;Note=frameshifted;gbkey=CDS;gene=hisS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004243819.1;locus_tag=J4731_15975;product=histidine--tRNA ligase;pseudo=true;transl_table=11
JAGETS010000032.1	Genbank	pseudogene	45917	47025	.	-	.	ID=gene-J4731_15980;Name=ispG;gbkey=Gene;gene=ispG;gene_biotype=pseudogene;gene_synonym=gcpE;locus_tag=J4731_15980;pseudo=true
JAGETS010000032.1	Protein Homology	CDS	45917	47025	.	-	0	ID=cds-J4731_15980;Parent=gene-J4731_15980;Note=frameshifted;gbkey=CDS;gene=ispG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016929756.1;locus_tag=J4731_15980;product=flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase;pseudo=true;transl_table=11
JAGETS010000032.1	Genbank	pseudogene	47213	48146	.	-	.	ID=gene-J4731_15985;Name=rodZ;gbkey=Gene;gene=rodZ;gene_biotype=pseudogene;locus_tag=J4731_15985;pseudo=true
JAGETS010000032.1	Protein Homology	CDS	47213	48146	.	-	0	ID=cds-J4731_15985;Parent=gene-J4731_15985;Note=frameshifted;gbkey=CDS;gene=rodZ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004264896.1;locus_tag=J4731_15985;product=cytoskeleton protein RodZ;pseudo=true;transl_table=11
JAGETS010000032.1	Genbank	pseudogene	48342	49409	.	-	.	ID=gene-J4731_15990;Name=trmG/rlmN;gbkey=Gene;gene=trmG/rlmN;gene_biotype=pseudogene;locus_tag=J4731_15990;pseudo=true
JAGETS010000032.1	Protein Homology	CDS	48342	49409	.	-	0	ID=cds-J4731_15990;Parent=gene-J4731_15990;Note=frameshifted;gbkey=CDS;gene=trmG/rlmN;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006705535.1;locus_tag=J4731_15990;product=bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN;pseudo=true;transl_table=11
JAGETS010000032.1	Genbank	gene	49426	49623	.	-	.	ID=gene-J4731_15995;Name=J4731_15995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_15995
JAGETS010000032.1	GeneMarkS-2+	CDS	49426	49623	.	-	0	ID=cds-MBO1929373.1;Parent=gene-J4731_15995;Dbxref=NCBI_GP:MBO1929373.1;Name=MBO1929373.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_15995;product=hypothetical protein;protein_id=MBO1929373.1;transl_table=11
JAGETS010000032.1	Genbank	pseudogene	49671	50089	.	-	.	ID=gene-J4731_16000;Name=ndk;gbkey=Gene;gene=ndk;gene_biotype=pseudogene;locus_tag=J4731_16000;pseudo=true
JAGETS010000032.1	Protein Homology	CDS	49671	50089	.	-	0	ID=cds-J4731_16000;Parent=gene-J4731_16000;Note=frameshifted;gbkey=CDS;gene=ndk;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012104805.1;locus_tag=J4731_16000;product=nucleoside-diphosphate kinase;pseudo=true;transl_table=11
JAGETS010000032.1	Genbank	pseudogene	50359	52669	.	-	.	ID=gene-J4731_16005;Name=pbpC;gbkey=Gene;gene=pbpC;gene_biotype=pseudogene;locus_tag=J4731_16005;pseudo=true
JAGETS010000032.1	Protein Homology	CDS	50359	52669	.	-	0	ID=cds-J4731_16005;Parent=gene-J4731_16005;Note=penicillin-binding protein 1C%3B frameshifted%3B internal stop;gbkey=CDS;gene=pbpC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004718015.1;locus_tag=J4731_16005;product=peptidoglycan glycosyltransferase PbpC;pseudo=true;transl_table=11
JAGETS010000032.1	Genbank	pseudogene	52742	57722	.	-	.	ID=gene-J4731_16010;Name=J4731_16010;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_16010;pseudo=true
JAGETS010000032.1	Protein Homology	CDS	52742	57722	.	-	0	ID=cds-J4731_16010;Parent=gene-J4731_16010;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004391221.1;locus_tag=J4731_16010;product=alpha-2-macroglobulin family protein;pseudo=true;transl_table=11
JAGETS010000032.1	Genbank	pseudogene	58608	59748	.	-	.	ID=gene-J4731_16015;Name=pepB;gbkey=Gene;gene=pepB;gene_biotype=pseudogene;locus_tag=J4731_16015;pseudo=true
JAGETS010000032.1	Protein Homology	CDS	58608	59748	.	-	0	ID=cds-J4731_16015;Parent=gene-J4731_16015;Note=frameshifted;gbkey=CDS;gene=pepB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017373461.1;locus_tag=J4731_16015;product=aminopeptidase PepB;pseudo=true;transl_table=11
JAGETS010000032.1	Genbank	pseudogene	60002	60216	.	-	.	ID=gene-J4731_16020;Name=iscX;gbkey=Gene;gene=iscX;gene_biotype=pseudogene;locus_tag=J4731_16020;pseudo=true
JAGETS010000032.1	Protein Homology	CDS	60002	60216	.	-	0	ID=cds-J4731_16020;Parent=gene-J4731_16020;Note=frameshifted;gbkey=CDS;gene=iscX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004959645.1;locus_tag=J4731_16020;product=Fe-S cluster assembly protein IscX;pseudo=true;transl_table=11
JAGETS010000032.1	Genbank	pseudogene	60274	61063	.	-	.	ID=gene-J4731_16025;Name=J4731_16025;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_16025;pseudo=true
JAGETS010000032.1	Protein Homology	CDS	60274	61063	.	-	0	ID=cds-J4731_16025;Parent=gene-J4731_16025;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004264907.1;locus_tag=J4731_16025;product=hypothetical protein;pseudo=true;transl_table=11
JAGETS010000032.1	Genbank	pseudogene	61101	62272	.	-	.	ID=gene-J4731_16030;Name=J4731_16030;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_16030;pseudo=true
JAGETS010000032.1	Protein Homology	CDS	61101	62272	.	-	0	ID=cds-J4731_16030;Parent=gene-J4731_16030;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006662863.1;locus_tag=J4731_16030;product=MFS transporter;pseudo=true;transl_table=11
JAGETS010000032.1	Genbank	pseudogene	62980	63314	.	-	.	ID=gene-J4731_16035;Name=fdx;gbkey=Gene;gene=fdx;gene_biotype=pseudogene;locus_tag=J4731_16035;pseudo=true
JAGETS010000032.1	Protein Homology	CDS	62980	63314	.	-	0	ID=cds-J4731_16035;Parent=gene-J4731_16035;Note=frameshifted;gbkey=CDS;gene=fdx;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015683702.1;locus_tag=J4731_16035;product=ISC system 2Fe-2S type ferredoxin;pseudo=true;transl_table=11
JAGETS010000032.1	Genbank	pseudogene	63317	65146	.	-	.	ID=gene-J4731_16040;Name=hscA;gbkey=Gene;gene=hscA;gene_biotype=pseudogene;locus_tag=J4731_16040;pseudo=true
JAGETS010000032.1	Protein Homology	CDS	63317	65146	.	-	0	ID=cds-J4731_16040;Parent=gene-J4731_16040;Note=frameshifted%3B internal stop;gbkey=CDS;gene=hscA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001559634.1;locus_tag=J4731_16040;product=Fe-S protein assembly chaperone HscA;pseudo=true;transl_table=11
JAGETS010000032.1	Genbank	pseudogene	65158	65670	.	-	.	ID=gene-J4731_16045;Name=hscB;gbkey=Gene;gene=hscB;gene_biotype=pseudogene;locus_tag=J4731_16045;pseudo=true
JAGETS010000032.1	Protein Homology	CDS	65158	65670	.	-	0	ID=cds-J4731_16045;Parent=gene-J4731_16045;Note=frameshifted;gbkey=CDS;gene=hscB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006658641.1;locus_tag=J4731_16045;product=co-chaperone HscB;pseudo=true;transl_table=11
JAGETS010000032.1	Genbank	gene	65758	66084	.	-	.	ID=gene-J4731_16050;Name=iscA;gbkey=Gene;gene=iscA;gene_biotype=protein_coding;locus_tag=J4731_16050
JAGETS010000032.1	Protein Homology	CDS	65758	66084	.	-	0	ID=cds-MBO1929374.1;Parent=gene-J4731_16050;Dbxref=NCBI_GP:MBO1929374.1;Name=MBO1929374.1;gbkey=CDS;gene=iscA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004236935.1;locus_tag=J4731_16050;product=iron-sulfur cluster assembly protein IscA;protein_id=MBO1929374.1;transl_table=11
JAGETS010000032.1	Genbank	pseudogene	66279	66664	.	-	.	ID=gene-J4731_16055;Name=iscU;gbkey=Gene;gene=iscU;gene_biotype=pseudogene;locus_tag=J4731_16055;pseudo=true
JAGETS010000032.1	Protein Homology	CDS	66279	66664	.	-	0	ID=cds-J4731_16055;Parent=gene-J4731_16055;Note=frameshifted;gbkey=CDS;gene=iscU;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000331707.1;locus_tag=J4731_16055;product=Fe-S cluster assembly scaffold IscU;pseudo=true;transl_table=11
JAGETS010000032.1	Genbank	pseudogene	66689	67878	.	-	.	ID=gene-J4731_16060;Name=J4731_16060;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_16060;pseudo=true
JAGETS010000032.1	Protein Homology	CDS	66689	67878	.	-	0	ID=cds-J4731_16060;Parent=gene-J4731_16060;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017459011.1;locus_tag=J4731_16060;product=IscS subfamily cysteine desulfurase;pseudo=true;transl_table=11
JAGETS010000032.1	Genbank	pseudogene	67992	68442	.	-	.	ID=gene-J4731_16065;Name=J4731_16065;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_16065;pseudo=true
JAGETS010000032.1	Protein Homology	CDS	67992	68442	.	-	0	ID=cds-J4731_16065;Parent=gene-J4731_16065;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009638942.1;locus_tag=J4731_16065;product=Rrf2 family transcriptional regulator;pseudo=true;transl_table=11
JAGETS010000032.1	Genbank	pseudogene	68600	69331	.	-	.	ID=gene-J4731_16070;Name=trmJ;gbkey=Gene;gene=trmJ;gene_biotype=pseudogene;locus_tag=J4731_16070;pseudo=true
JAGETS010000032.1	Protein Homology	CDS	68600	69331	.	-	0	ID=cds-J4731_16070;Parent=gene-J4731_16070;Note=frameshifted;gbkey=CDS;gene=trmJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004921401.1;locus_tag=J4731_16070;product=tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ;pseudo=true;transl_table=11
JAGETS010000032.1	Genbank	pseudogene	69439	70246	.	+	.	ID=gene-J4731_16075;Name=suhB;gbkey=Gene;gene=suhB;gene_biotype=pseudogene;locus_tag=J4731_16075;pseudo=true
JAGETS010000032.1	Protein Homology	CDS	69439	70246	.	+	0	ID=cds-J4731_16075;Parent=gene-J4731_16075;Note=frameshifted;gbkey=CDS;gene=suhB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003848661.1;locus_tag=J4731_16075;product=inositol-1-monophosphatase;pseudo=true;transl_table=11
JAGETS010000032.1	Genbank	pseudogene	70329	71335	.	-	.	ID=gene-J4731_16080;Name=J4731_16080;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_16080;pseudo=true
JAGETS010000032.1	Protein Homology	CDS	70329	71335	.	-	0	ID=cds-J4731_16080;Parent=gene-J4731_16080;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001317605.1;locus_tag=J4731_16080;product=zinc-binding alcohol dehydrogenase family protein;pseudo=true;transl_table=11
JAGETS010000032.1	Genbank	pseudogene	71495	72374	.	+	.	ID=gene-J4731_16085;Name=J4731_16085;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_16085;pseudo=true
JAGETS010000032.1	Protein Homology	CDS	71495	72374	.	+	0	ID=cds-J4731_16085;Parent=gene-J4731_16085;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004264921.1;locus_tag=J4731_16085;product=GntR family transcriptional regulator;pseudo=true;transl_table=11
JAGETS010000032.1	Genbank	pseudogene	72736	74119	.	+	.	ID=gene-J4731_16090;Name=J4731_16090;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_16090;pseudo=true
JAGETS010000032.1	Protein Homology	CDS	72736	74119	.	+	0	ID=cds-J4731_16090;Parent=gene-J4731_16090;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014837342.1;locus_tag=J4731_16090;product=tagaturonate reductase;pseudo=true;transl_table=11
JAGETS010000032.1	Genbank	gene	74214	74360	.	+	.	ID=gene-J4731_16095;Name=J4731_16095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_16095
JAGETS010000032.1	GeneMarkS-2+	CDS	74214	74360	.	+	0	ID=cds-MBO1929375.1;Parent=gene-J4731_16095;Dbxref=NCBI_GP:MBO1929375.1;Name=MBO1929375.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_16095;product=hypothetical protein;protein_id=MBO1929375.1;transl_table=11
JAGETS010000032.1	Genbank	gene	74648	74752	.	+	.	ID=gene-J4731_16100;Name=J4731_16100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_16100
JAGETS010000032.1	Protein Homology	CDS	74648	74752	.	+	0	ID=cds-MBO1929376.1;Parent=gene-J4731_16100;Dbxref=NCBI_GP:MBO1929376.1;Name=MBO1929376.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015445.1;locus_tag=J4731_16100;product=hypothetical protein;protein_id=MBO1929376.1;transl_table=11
JAGETS010000032.1	Genbank	gene	74778	74936	.	+	.	ID=gene-J4731_16105;Name=J4731_16105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_16105
JAGETS010000032.1	Protein Homology	CDS	74778	74936	.	+	0	ID=cds-MBO1929377.1;Parent=gene-J4731_16105;Dbxref=NCBI_GP:MBO1929377.1;Name=MBO1929377.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015445.1;locus_tag=J4731_16105;product=hypothetical protein;protein_id=MBO1929377.1;transl_table=11
JAGETS010000032.1	Genbank	gene	74948	75208	.	+	.	ID=gene-J4731_16110;Name=J4731_16110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_16110
JAGETS010000032.1	Protein Homology	CDS	74948	75208	.	+	0	ID=cds-MBO1929378.1;Parent=gene-J4731_16110;Dbxref=NCBI_GP:MBO1929378.1;Name=MBO1929378.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015445.1;locus_tag=J4731_16110;product=hypothetical protein;protein_id=MBO1929378.1;transl_table=11
JAGETS010000032.1	Genbank	gene	75316	75468	.	+	.	ID=gene-J4731_16115;Name=J4731_16115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_16115
JAGETS010000032.1	Protein Homology	CDS	75316	75468	.	+	0	ID=cds-MBO1929379.1;Parent=gene-J4731_16115;Dbxref=NCBI_GP:MBO1929379.1;Name=MBO1929379.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016200.1;locus_tag=J4731_16115;product=TRAP transporter small permease subunit;protein_id=MBO1929379.1;transl_table=11
JAGETS010000032.1	Genbank	gene	75550	75798	.	+	.	ID=gene-J4731_16120;Name=J4731_16120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_16120
JAGETS010000032.1	Protein Homology	CDS	75550	75798	.	+	0	ID=cds-MBO1929380.1;Parent=gene-J4731_16120;Dbxref=NCBI_GP:MBO1929380.1;Name=MBO1929380.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016200.1;locus_tag=J4731_16120;product=TRAP transporter small permease subunit;protein_id=MBO1929380.1;transl_table=11
JAGETS010000032.1	Genbank	pseudogene	75749	77013	.	+	.	ID=gene-J4731_16125;Name=J4731_16125;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_16125;pseudo=true
JAGETS010000032.1	Protein Homology	CDS	75749	77013	.	+	0	ID=cds-J4731_16125;Parent=gene-J4731_16125;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012147377.1;locus_tag=J4731_16125;product=TRAP transporter large permease;pseudo=true;transl_table=11
JAGETS010000032.1	Genbank	pseudogene	77424	78010	.	+	.	ID=gene-J4731_16130;Name=J4731_16130;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_16130;pseudo=true
JAGETS010000032.1	Protein Homology	CDS	77424	78010	.	+	0	ID=cds-J4731_16130;Parent=gene-J4731_16130;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006815985.1;locus_tag=J4731_16130;product=type 1 fimbrial protein;pseudo=true;transl_table=11
JAGETS010000032.1	Genbank	pseudogene	78060	78742	.	+	.	ID=gene-J4731_16135;Name=J4731_16135;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_16135;pseudo=true
JAGETS010000032.1	Protein Homology	CDS	78060	78742	.	+	0	ID=cds-J4731_16135;Parent=gene-J4731_16135;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006663315.1;locus_tag=J4731_16135;product=molecular chaperone;pseudo=true;transl_table=11
JAGETS010000032.1	Genbank	pseudogene	78757	81224	.	+	.	ID=gene-J4731_16140;Name=J4731_16140;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_16140;pseudo=true
JAGETS010000032.1	Protein Homology	CDS	78757	81224	.	+	0	ID=cds-J4731_16140;Parent=gene-J4731_16140;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006658284.1;locus_tag=J4731_16140;product=fimbrial biogenesis outer membrane usher protein;pseudo=true;transl_table=11
JAGETS010000032.1	Genbank	pseudogene	81210	82310	.	+	.	ID=gene-J4731_16145;Name=J4731_16145;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_16145;pseudo=true
JAGETS010000032.1	Protein Homology	CDS	81210	82310	.	+	0	ID=cds-J4731_16145;Parent=gene-J4731_16145;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006663317.1;locus_tag=J4731_16145;product=fimbrial protein;pseudo=true;transl_table=11
JAGETS010000032.1	Genbank	gene	82302	82622	.	+	.	ID=gene-J4731_16150;Name=J4731_16150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_16150
JAGETS010000032.1	Protein Homology	CDS	82302	82622	.	+	0	ID=cds-MBO1929381.1;Parent=gene-J4731_16150;Dbxref=NCBI_GP:MBO1929381.1;Name=MBO1929381.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012565.1;locus_tag=J4731_16150;product=fimbria/pilus periplasmic chaperone;protein_id=MBO1929381.1;transl_table=11
JAGETS010000032.1	Genbank	pseudogene	82612	82791	.	+	.	ID=gene-J4731_16155;Name=J4731_16155;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_16155;pseudo=true
JAGETS010000032.1	Protein Homology	CDS	82612	82791	.	+	0	ID=cds-J4731_16155;Parent=gene-J4731_16155;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012565.1;locus_tag=J4731_16155;product=fimbria/pilus periplasmic chaperone;pseudo=true;transl_table=11
JAGETS010000032.1	Genbank	gene	82834	83010	.	+	.	ID=gene-J4731_16160;Name=J4731_16160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_16160
JAGETS010000032.1	Protein Homology	CDS	82834	83010	.	+	0	ID=cds-MBO1929382.1;Parent=gene-J4731_16160;Dbxref=NCBI_GP:MBO1929382.1;Name=MBO1929382.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014773.1;locus_tag=J4731_16160;product=hypothetical protein;protein_id=MBO1929382.1;transl_table=11
JAGETS010000032.1	Genbank	pseudogene	83028	84223	.	-	.	ID=gene-J4731_16165;Name=J4731_16165;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_16165;pseudo=true
JAGETS010000032.1	Protein Homology	CDS	83028	84223	.	-	0	ID=cds-J4731_16165;Parent=gene-J4731_16165;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017347792.1;locus_tag=J4731_16165;product=3-phenylpropionate MFS transporter;pseudo=true;transl_table=11
##sequence-region JAGETS010000033.1 1 102393
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=587
JAGETS010000033.1	Genbank	region	1	102393	.	+	.	ID=JAGETS010000033.1:1..102393;Dbxref=taxon:587;collected-by=NHLS;collection-date=2018;country=South Africa: Pretoria;gbkey=Src;isolation-source=stool;lat-lon=25.7479 S 28.2293 E;mol_type=genomic DNA;nat-host=porcine;strain=SG003
JAGETS010000033.1	Genbank	pseudogene	572	1153	.	+	.	ID=gene-J4731_16170;Name=J4731_16170;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_16170;pseudo=true
JAGETS010000033.1	Protein Homology	CDS	572	1153	.	+	0	ID=cds-J4731_16170;Parent=gene-J4731_16170;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003020714.1;locus_tag=J4731_16170;product=YchE family NAAT transporter;pseudo=true;transl_table=11
JAGETS010000033.1	Genbank	pseudogene	1685	3291	.	+	.	ID=gene-J4731_16175;Name=J4731_16175;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_16175;pseudo=true
JAGETS010000033.1	Protein Homology	CDS	1685	3291	.	+	0	ID=cds-J4731_16175;Parent=gene-J4731_16175;Note=is involved in the transport of the murein peptide L-alanyl-gamma-D-glutamyl-meso-diaminopimelate%3B frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004254114.1;locus_tag=J4731_16175;product=oligopeptide ABC transporter substrate-binding protein OppA;pseudo=true;transl_table=11
JAGETS010000033.1	Genbank	pseudogene	3385	5016	.	+	.	ID=gene-J4731_16180;Name=oppA;gbkey=Gene;gene=oppA;gene_biotype=pseudogene;locus_tag=J4731_16180;pseudo=true
JAGETS010000033.1	Protein Homology	CDS	3385	5016	.	+	0	ID=cds-J4731_16180;Parent=gene-J4731_16180;Note=frameshifted;gbkey=CDS;gene=oppA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006661680.1;locus_tag=J4731_16180;product=oligopeptide ABC transporter substrate-binding protein OppA;pseudo=true;transl_table=11
JAGETS010000033.1	Genbank	pseudogene	5088	6005	.	+	.	ID=gene-J4731_16185;Name=oppB;gbkey=Gene;gene=oppB;gene_biotype=pseudogene;locus_tag=J4731_16185;pseudo=true
JAGETS010000033.1	Protein Homology	CDS	5088	6005	.	+	0	ID=cds-J4731_16185;Parent=gene-J4731_16185;Note=frameshifted;gbkey=CDS;gene=oppB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126405.1;locus_tag=J4731_16185;product=oligopeptide ABC transporter permease OppB;pseudo=true;transl_table=11
JAGETS010000033.1	Genbank	pseudogene	6025	6924	.	+	.	ID=gene-J4731_16190;Name=oppC;gbkey=Gene;gene=oppC;gene_biotype=pseudogene;locus_tag=J4731_16190;pseudo=true
JAGETS010000033.1	Protein Homology	CDS	6025	6924	.	+	0	ID=cds-J4731_16190;Parent=gene-J4731_16190;Note=frameshifted;gbkey=CDS;gene=oppC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009635973.1;locus_tag=J4731_16190;product=oligopeptide ABC transporter permease OppC;pseudo=true;transl_table=11
JAGETS010000033.1	Genbank	pseudogene	6935	7919	.	+	.	ID=gene-J4731_16195;Name=J4731_16195;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_16195;pseudo=true
JAGETS010000033.1	Protein Homology	CDS	6935	7919	.	+	0	ID=cds-J4731_16195;Parent=gene-J4731_16195;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004243228.1;locus_tag=J4731_16195;product=ABC transporter ATP-binding protein;pseudo=true;transl_table=11
JAGETS010000033.1	Genbank	pseudogene	7916	8914	.	+	.	ID=gene-J4731_16200;Name=oppF;gbkey=Gene;gene=oppF;gene_biotype=pseudogene;locus_tag=J4731_16200;pseudo=true
JAGETS010000033.1	Protein Homology	CDS	7916	8914	.	+	0	ID=cds-J4731_16200;Parent=gene-J4731_16200;Note=frameshifted%3B internal stop;gbkey=CDS;gene=oppF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013509339.1;locus_tag=J4731_16200;product=murein tripeptide/oligopeptide ABC transporter ATP binding protein OppF;pseudo=true;transl_table=11
JAGETS010000033.1	Genbank	gene	8998	9333	.	-	.	ID=gene-J4731_16205;Name=J4731_16205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_16205
JAGETS010000033.1	Protein Homology	CDS	8998	9333	.	-	0	ID=cds-MBO1929383.1;Parent=gene-J4731_16205;Dbxref=NCBI_GP:MBO1929383.1;Name=MBO1929383.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012367973.1;locus_tag=J4731_16205;product=DUF440 family protein;protein_id=MBO1929383.1;transl_table=11
JAGETS010000033.1	Genbank	pseudogene	9356	10698	.	-	.	ID=gene-J4731_16210;Name=cls;gbkey=Gene;gene=cls;gene_biotype=pseudogene;locus_tag=J4731_16210;pseudo=true
JAGETS010000033.1	Protein Homology	CDS	9356	10698	.	-	0	ID=cds-J4731_16210;Parent=gene-J4731_16210;Note=frameshifted%3B internal stop;gbkey=CDS;gene=cls;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192514.1;locus_tag=J4731_16210;product=cardiolipin synthase;pseudo=true;transl_table=11
JAGETS010000033.1	Genbank	pseudogene	11091	11242	.	+	.	ID=gene-J4731_16215;Name=J4731_16215;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_16215;pseudo=true
JAGETS010000033.1	Protein Homology	CDS	11091	11242	.	+	0	ID=cds-J4731_16215;Parent=gene-J4731_16215;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004254127.1;locus_tag=J4731_16215;product=YciY family protein;pseudo=true;transl_table=11
JAGETS010000033.1	Genbank	pseudogene	11379	12087	.	+	.	ID=gene-J4731_16220;Name=J4731_16220;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_16220;pseudo=true
JAGETS010000033.1	Protein Homology	CDS	11379	12087	.	+	0	ID=cds-J4731_16220;Parent=gene-J4731_16220;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004920238.1;locus_tag=J4731_16220;product=TonB family protein;pseudo=true;transl_table=11
JAGETS010000033.1	Genbank	pseudogene	12196	12592	.	-	.	ID=gene-J4731_16225;Name=yciA;gbkey=Gene;gene=yciA;gene_biotype=pseudogene;locus_tag=J4731_16225;pseudo=true
JAGETS010000033.1	Protein Homology	CDS	12196	12592	.	-	0	ID=cds-J4731_16225;Parent=gene-J4731_16225;Note=frameshifted;gbkey=CDS;gene=yciA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005285216.1;locus_tag=J4731_16225;product=acyl-CoA thioester hydrolase YciA;pseudo=true;transl_table=11
JAGETS010000033.1	Genbank	pseudogene	13129	13689	.	-	.	ID=gene-J4731_16230;Name=J4731_16230;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_16230;pseudo=true
JAGETS010000033.1	Protein Homology	CDS	13129	13689	.	-	0	ID=cds-J4731_16230;Parent=gene-J4731_16230;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006661683.1;locus_tag=J4731_16230;product=septation protein A;pseudo=true;transl_table=11
JAGETS010000033.1	Genbank	pseudogene	13914	15646	.	+	.	ID=gene-J4731_16235;Name=J4731_16235;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_16235;pseudo=true
JAGETS010000033.1	Protein Homology	CDS	13914	15646	.	+	0	ID=cds-J4731_16235;Parent=gene-J4731_16235;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006658725.1;locus_tag=J4731_16235;product=SulP family inorganic anion transporter;pseudo=true;transl_table=11
JAGETS010000033.1	Genbank	pseudogene	15699	16499	.	-	.	ID=gene-J4731_16240;Name=J4731_16240;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_16240;pseudo=true
JAGETS010000033.1	Protein Homology	CDS	15699	16499	.	-	0	ID=cds-J4731_16240;Parent=gene-J4731_16240;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006658724.1;locus_tag=J4731_16240;product=hypothetical protein;pseudo=true;transl_table=11
JAGETS010000033.1	Genbank	pseudogene	16953	17542	.	+	.	ID=gene-J4731_16245;Name=ompW;gbkey=Gene;gene=ompW;gene_biotype=pseudogene;locus_tag=J4731_16245;pseudo=true
JAGETS010000033.1	Protein Homology	CDS	16953	17542	.	+	0	ID=cds-J4731_16245;Parent=gene-J4731_16245;Note=frameshifted;gbkey=CDS;gene=ompW;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004203849.1;locus_tag=J4731_16245;product=outer membrane protein OmpW;pseudo=true;transl_table=11
JAGETS010000033.1	Genbank	gene	17872	18009	.	-	.	ID=gene-J4731_16250;Name=J4731_16250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_16250
JAGETS010000033.1	GeneMarkS-2+	CDS	17872	18009	.	-	0	ID=cds-MBO1929384.1;Parent=gene-J4731_16250;Dbxref=NCBI_GP:MBO1929384.1;Name=MBO1929384.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_16250;product=hypothetical protein;protein_id=MBO1929384.1;transl_table=11
JAGETS010000033.1	Genbank	gene	18155	18544	.	-	.	ID=gene-J4731_16255;Name=J4731_16255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_16255
JAGETS010000033.1	Protein Homology	CDS	18155	18544	.	-	0	ID=cds-MBO1929385.1;Parent=gene-J4731_16255;Dbxref=NCBI_GP:MBO1929385.1;Name=MBO1929385.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015803.1;locus_tag=J4731_16255;product=hypothetical protein;protein_id=MBO1929385.1;transl_table=11
JAGETS010000033.1	Genbank	gene	18535	18714	.	-	.	ID=gene-J4731_16260;Name=J4731_16260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_16260
JAGETS010000033.1	Protein Homology	CDS	18535	18714	.	-	0	ID=cds-MBO1929386.1;Parent=gene-J4731_16260;Dbxref=NCBI_GP:MBO1929386.1;Name=MBO1929386.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015803.1;locus_tag=J4731_16260;product=hypothetical protein;protein_id=MBO1929386.1;transl_table=11
JAGETS010000033.1	Genbank	gene	18916	19020	.	-	.	ID=gene-J4731_16265;Name=J4731_16265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_16265
JAGETS010000033.1	Protein Homology	CDS	18916	19020	.	-	0	ID=cds-MBO1929387.1;Parent=gene-J4731_16265;Dbxref=NCBI_GP:MBO1929387.1;Name=MBO1929387.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF036420.1;locus_tag=J4731_16265;product=hypothetical protein;protein_id=MBO1929387.1;transl_table=11
JAGETS010000033.1	Genbank	gene	19014	19172	.	-	.	ID=gene-J4731_16270;Name=J4731_16270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_16270
JAGETS010000033.1	Protein Homology	CDS	19014	19172	.	-	0	ID=cds-MBO1929388.1;Parent=gene-J4731_16270;Dbxref=NCBI_GP:MBO1929388.1;Name=MBO1929388.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020068.1;locus_tag=J4731_16270;product=hypothetical protein;protein_id=MBO1929388.1;transl_table=11
JAGETS010000033.1	Genbank	gene	19187	19324	.	-	.	ID=gene-J4731_16275;Name=J4731_16275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_16275
JAGETS010000033.1	GeneMarkS-2+	CDS	19187	19324	.	-	0	ID=cds-MBO1929389.1;Parent=gene-J4731_16275;Dbxref=NCBI_GP:MBO1929389.1;Name=MBO1929389.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_16275;product=hypothetical protein;protein_id=MBO1929389.1;transl_table=11
JAGETS010000033.1	Genbank	gene	19354	19551	.	-	.	ID=gene-J4731_16280;Name=J4731_16280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_16280
JAGETS010000033.1	GeneMarkS-2+	CDS	19354	19551	.	-	0	ID=cds-MBO1929390.1;Parent=gene-J4731_16280;Dbxref=NCBI_GP:MBO1929390.1;Name=MBO1929390.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_16280;product=hypothetical protein;protein_id=MBO1929390.1;transl_table=11
JAGETS010000033.1	Genbank	gene	20132	20782	.	-	.	ID=gene-J4731_16285;Name=J4731_16285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_16285
JAGETS010000033.1	GeneMarkS-2+	CDS	20132	20782	.	-	0	ID=cds-MBO1929391.1;Parent=gene-J4731_16285;Dbxref=NCBI_GP:MBO1929391.1;Name=MBO1929391.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_16285;product=hypothetical protein;protein_id=MBO1929391.1;transl_table=11
JAGETS010000033.1	Genbank	gene	20954	21142	.	-	.	ID=gene-J4731_16290;Name=J4731_16290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_16290
JAGETS010000033.1	GeneMarkS-2+	CDS	20954	21142	.	-	0	ID=cds-MBO1929392.1;Parent=gene-J4731_16290;Dbxref=NCBI_GP:MBO1929392.1;Name=MBO1929392.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_16290;product=hypothetical protein;protein_id=MBO1929392.1;transl_table=11
JAGETS010000033.1	Genbank	gene	21139	21237	.	-	.	ID=gene-J4731_16295;Name=J4731_16295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_16295
JAGETS010000033.1	Protein Homology	CDS	21139	21237	.	-	0	ID=cds-MBO1929393.1;Parent=gene-J4731_16295;Dbxref=NCBI_GP:MBO1929393.1;Name=MBO1929393.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR01731.1;locus_tag=J4731_16295;product=hypothetical protein;protein_id=MBO1929393.1;transl_table=11
JAGETS010000033.1	Genbank	gene	21285	21623	.	-	.	ID=gene-J4731_16300;Name=J4731_16300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_16300
JAGETS010000033.1	Protein Homology	CDS	21285	21623	.	-	0	ID=cds-MBO1929394.1;Parent=gene-J4731_16300;Dbxref=NCBI_GP:MBO1929394.1;Name=MBO1929394.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017412.1;locus_tag=J4731_16300;product=hypothetical protein;protein_id=MBO1929394.1;transl_table=11
JAGETS010000033.1	Genbank	gene	21620	21883	.	-	.	ID=gene-J4731_16305;Name=J4731_16305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_16305
JAGETS010000033.1	Protein Homology	CDS	21620	21883	.	-	0	ID=cds-MBO1929395.1;Parent=gene-J4731_16305;Dbxref=NCBI_GP:MBO1929395.1;Name=MBO1929395.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017658.1;locus_tag=J4731_16305;product=filamentous hemagglutinin N-terminal domain-containing protein;protein_id=MBO1929395.1;transl_table=11
JAGETS010000033.1	Genbank	pseudogene	22694	23497	.	-	.	ID=gene-J4731_16310;Name=trpA;gbkey=Gene;gene=trpA;gene_biotype=pseudogene;locus_tag=J4731_16310;pseudo=true
JAGETS010000033.1	Protein Homology	CDS	22694	23497	.	-	0	ID=cds-J4731_16310;Parent=gene-J4731_16310;Note=frameshifted%3B internal stop;gbkey=CDS;gene=trpA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007371919.1;locus_tag=J4731_16310;product=tryptophan synthase subunit alpha;pseudo=true;transl_table=11
JAGETS010000033.1	Genbank	pseudogene	23519	24676	.	-	.	ID=gene-J4731_16315;Name=trpB;gbkey=Gene;gene=trpB;gene_biotype=pseudogene;locus_tag=J4731_16315;pseudo=true
JAGETS010000033.1	Protein Homology	CDS	23519	24676	.	-	0	ID=cds-J4731_16315;Parent=gene-J4731_16315;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;gene=trpB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011146690.1;locus_tag=J4731_16315;product=tryptophan synthase subunit beta;pseudo=true;transl_table=11
JAGETS010000033.1	Genbank	pseudogene	24703	26117	.	-	.	ID=gene-J4731_16320;Name=trpCF;gbkey=Gene;gene=trpCF;gene_biotype=pseudogene;locus_tag=J4731_16320;pseudo=true
JAGETS010000033.1	Protein Homology	CDS	24703	26117	.	-	0	ID=cds-J4731_16320;Parent=gene-J4731_16320;Note=frameshifted%3B internal stop;gbkey=CDS;gene=trpCF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006812909.1;locus_tag=J4731_16320;product=bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF;pseudo=true;transl_table=11
JAGETS010000033.1	Genbank	pseudogene	26080	27073	.	-	.	ID=gene-J4731_16325;Name=trpD;gbkey=Gene;gene=trpD;gene_biotype=pseudogene;locus_tag=J4731_16325;pseudo=true
JAGETS010000033.1	Protein Homology	CDS	26080	27073	.	-	0	ID=cds-J4731_16325;Parent=gene-J4731_16325;Note=frameshifted;gbkey=CDS;gene=trpD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004254164.1;locus_tag=J4731_16325;product=anthranilate phosphoribosyltransferase;pseudo=true;transl_table=11
JAGETS010000033.1	Genbank	pseudogene	27031	27703	.	-	.	ID=gene-J4731_16330;Name=J4731_16330;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_16330;pseudo=true
JAGETS010000033.1	Protein Homology	CDS	27031	27703	.	-	0	ID=cds-J4731_16330;Parent=gene-J4731_16330;Note=Members of this family of hydrolases with an active site Cys residue belong to MEROPS family C26.%3B frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006812911.1;locus_tag=J4731_16330;product=gamma-glutamyl-gamma-aminobutyrate hydrolase family protein;pseudo=true;transl_table=11
JAGETS010000033.1	Genbank	pseudogene	27703	29268	.	-	.	ID=gene-J4731_16335;Name=J4731_16335;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_16335;pseudo=true
JAGETS010000033.1	Protein Homology	CDS	27703	29268	.	-	0	ID=cds-J4731_16335;Parent=gene-J4731_16335;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006812912.1;locus_tag=J4731_16335;product=anthranilate synthase component 1;pseudo=true;transl_table=11
JAGETS010000033.1	cmsearch	sequence_feature	29293	29394	.	-	.	ID=id-JAGETS010000033.1:29293..29394;Dbxref=RFAM:RF00513;Note=Trp leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.1
JAGETS010000033.1	Genbank	pseudogene	29557	30422	.	+	.	ID=gene-J4731_16340;Name=J4731_16340;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_16340;pseudo=true
JAGETS010000033.1	Protein Homology	CDS	29557	30422	.	+	0	ID=cds-J4731_16340;Parent=gene-J4731_16340;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006812913.1;locus_tag=J4731_16340;product=PHP domain-containing protein;pseudo=true;transl_table=11
JAGETS010000033.1	Genbank	pseudogene	30569	31166	.	+	.	ID=gene-J4731_16345;Name=J4731_16345;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_16345;pseudo=true
JAGETS010000033.1	Protein Homology	CDS	30569	31166	.	+	0	ID=cds-J4731_16345;Parent=gene-J4731_16345;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015871031.1;locus_tag=J4731_16345;product=threonylcarbamoyl-AMP synthase;pseudo=true;transl_table=11
JAGETS010000033.1	Genbank	pseudogene	31342	32327	.	+	.	ID=gene-J4731_16350;Name=rluB;gbkey=Gene;gene=rluB;gene_biotype=pseudogene;locus_tag=J4731_16350;pseudo=true
JAGETS010000033.1	Protein Homology	CDS	31342	32327	.	+	0	ID=cds-J4731_16350;Parent=gene-J4731_16350;Note=frameshifted;gbkey=CDS;gene=rluB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309868.1;locus_tag=J4731_16350;product=23S rRNA pseudouridine(2605) synthase RluB;pseudo=true;transl_table=11
JAGETS010000033.1	Genbank	pseudogene	32668	33361	.	+	.	ID=gene-J4731_16355;Name=aphA;gbkey=Gene;gene=aphA;gene_biotype=pseudogene;locus_tag=J4731_16355;pseudo=true
JAGETS010000033.1	Protein Homology	CDS	32668	33361	.	+	0	ID=cds-J4731_16355;Parent=gene-J4731_16355;Note=frameshifted%3B internal stop;gbkey=CDS;gene=aphA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000724441.1;locus_tag=J4731_16355;product=acid phosphatase AphA;pseudo=true;transl_table=11
JAGETS010000033.1	Genbank	gene	33846	34055	.	-	.	ID=gene-J4731_16360;Name=J4731_16360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_16360
JAGETS010000033.1	GeneMarkS-2+	CDS	33846	34055	.	-	0	ID=cds-MBO1929396.1;Parent=gene-J4731_16360;Dbxref=NCBI_GP:MBO1929396.1;Name=MBO1929396.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_16360;product=hypothetical protein;protein_id=MBO1929396.1;transl_table=11
JAGETS010000033.1	Genbank	gene	34073	34567	.	-	.	ID=gene-J4731_16365;Name=J4731_16365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_16365
JAGETS010000033.1	Protein Homology	CDS	34073	34567	.	-	0	ID=cds-MBO1929397.1;Parent=gene-J4731_16365;Dbxref=NCBI_GP:MBO1929397.1;Name=MBO1929397.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR01731.1;locus_tag=J4731_16365;product=hypothetical protein;protein_id=MBO1929397.1;transl_table=11
JAGETS010000033.1	Genbank	gene	34564	34824	.	-	.	ID=gene-J4731_16370;Name=J4731_16370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_16370
JAGETS010000033.1	GeneMarkS-2+	CDS	34564	34824	.	-	0	ID=cds-MBO1929398.1;Parent=gene-J4731_16370;Dbxref=NCBI_GP:MBO1929398.1;Name=MBO1929398.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_16370;product=hypothetical protein;protein_id=MBO1929398.1;transl_table=11
JAGETS010000033.1	Genbank	gene	34904	35509	.	-	.	ID=gene-J4731_16375;Name=J4731_16375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_16375
JAGETS010000033.1	Protein Homology	CDS	34904	35509	.	-	0	ID=cds-MBO1929399.1;Parent=gene-J4731_16375;Dbxref=NCBI_GP:MBO1929399.1;Name=MBO1929399.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017658.1;locus_tag=J4731_16375;product=filamentous hemagglutinin N-terminal domain-containing protein;protein_id=MBO1929399.1;transl_table=11
JAGETS010000033.1	Genbank	gene	35502	35855	.	-	.	ID=gene-J4731_16380;Name=J4731_16380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_16380
JAGETS010000033.1	Protein Homology	CDS	35502	35855	.	-	0	ID=cds-MBO1929400.1;Parent=gene-J4731_16380;Dbxref=NCBI_GP:MBO1929400.1;Name=MBO1929400.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017658.1;locus_tag=J4731_16380;product=hypothetical protein;protein_id=MBO1929400.1;transl_table=11
JAGETS010000033.1	Genbank	gene	36508	37338	.	-	.	ID=gene-J4731_16385;Name=J4731_16385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_16385
JAGETS010000033.1	GeneMarkS-2+	CDS	36508	37338	.	-	0	ID=cds-MBO1929401.1;Parent=gene-J4731_16385;Dbxref=NCBI_GP:MBO1929401.1;Name=MBO1929401.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_16385;product=hypothetical protein;protein_id=MBO1929401.1;transl_table=11
JAGETS010000033.1	Genbank	gene	37639	37899	.	-	.	ID=gene-J4731_16390;Name=J4731_16390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_16390
JAGETS010000033.1	GeneMarkS-2+	CDS	37639	37899	.	-	0	ID=cds-MBO1929402.1;Parent=gene-J4731_16390;Dbxref=NCBI_GP:MBO1929402.1;Name=MBO1929402.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_16390;product=hypothetical protein;protein_id=MBO1929402.1;transl_table=11
JAGETS010000033.1	Genbank	gene	38020	38220	.	-	.	ID=gene-J4731_16395;Name=J4731_16395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_16395
JAGETS010000033.1	Protein Homology	CDS	38020	38220	.	-	0	ID=cds-MBO1929403.1;Parent=gene-J4731_16395;Dbxref=NCBI_GP:MBO1929403.1;Name=MBO1929403.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017658.1;locus_tag=J4731_16395;product=filamentous hemagglutinin N-terminal domain-containing protein;protein_id=MBO1929403.1;transl_table=11
JAGETS010000033.1	Genbank	gene	38160	38423	.	-	.	ID=gene-J4731_16400;Name=J4731_16400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_16400
JAGETS010000033.1	Protein Homology	CDS	38160	38423	.	-	0	ID=cds-MBO1929404.1;Parent=gene-J4731_16400;Dbxref=NCBI_GP:MBO1929404.1;Name=MBO1929404.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017658.1;locus_tag=J4731_16400;product=hypothetical protein;protein_id=MBO1929404.1;transl_table=11
JAGETS010000033.1	Genbank	pseudogene	39029	39600	.	-	.	ID=gene-J4731_16405;Name=cobO;gbkey=Gene;gene=cobO;gene_biotype=pseudogene;locus_tag=J4731_16405;pseudo=true
JAGETS010000033.1	Protein Homology	CDS	39029	39600	.	-	0	ID=cds-J4731_16405;Parent=gene-J4731_16405;Note=frameshifted%3B internal stop;gbkey=CDS;gene=cobO;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004243052.1;locus_tag=J4731_16405;product=cob(I)yrinic acid a%2Cc-diamide adenosyltransferase;pseudo=true;transl_table=11
JAGETS010000033.1	Genbank	pseudogene	39617	40359	.	-	.	ID=gene-J4731_16410;Name=J4731_16410;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_16410;pseudo=true
JAGETS010000033.1	Protein Homology	CDS	39617	40359	.	-	0	ID=cds-J4731_16410;Parent=gene-J4731_16410;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008784935.1;locus_tag=J4731_16410;product=YciK family oxidoreductase;pseudo=true;transl_table=11
JAGETS010000033.1	Genbank	pseudogene	40535	41588	.	+	.	ID=gene-J4731_16415;Name=sohB;gbkey=Gene;gene=sohB;gene_biotype=pseudogene;locus_tag=J4731_16415;pseudo=true
JAGETS010000033.1	Protein Homology	CDS	40535	41588	.	+	0	ID=cds-J4731_16415;Parent=gene-J4731_16415;Note=frameshifted;gbkey=CDS;gene=sohB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006812919.1;locus_tag=J4731_16415;product=protease SohB;pseudo=true;transl_table=11
JAGETS010000033.1	Genbank	gene	41667	41912	.	-	.	ID=gene-J4731_16420;Name=J4731_16420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_16420
JAGETS010000033.1	Protein Homology	CDS	41667	41912	.	-	0	ID=cds-MBO1929405.1;Parent=gene-J4731_16420;Dbxref=NCBI_GP:MBO1929405.1;Name=MBO1929405.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006658707.1;locus_tag=J4731_16420;product=DUF2498 family protein;protein_id=MBO1929405.1;transl_table=11
JAGETS010000033.1	Genbank	pseudogene	42209	44799	.	+	.	ID=gene-J4731_16425;Name=topA;gbkey=Gene;gene=topA;gene_biotype=pseudogene;locus_tag=J4731_16425;pseudo=true
JAGETS010000033.1	Protein Homology	CDS	42209	44799	.	+	0	ID=cds-J4731_16425;Parent=gene-J4731_16425;Note=frameshifted;gbkey=CDS;gene=topA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000513601.1;locus_tag=J4731_16425;product=type I DNA topoisomerase;pseudo=true;transl_table=11
JAGETS010000033.1	Genbank	gene	45118	45675	.	+	.	ID=gene-J4731_16430;Name=J4731_16430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_16430
JAGETS010000033.1	Protein Homology	CDS	45118	45675	.	+	0	ID=cds-MBO1929406.1;Parent=gene-J4731_16430;Dbxref=NCBI_GP:MBO1929406.1;Name=MBO1929406.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006661697.1;locus_tag=J4731_16430;product=superoxide dismutase family protein;protein_id=MBO1929406.1;transl_table=11
JAGETS010000033.1	Genbank	pseudogene	46123	48139	.	-	.	ID=gene-J4731_16435;Name=J4731_16435;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_16435;pseudo=true
JAGETS010000033.1	Protein Homology	CDS	46123	48139	.	-	0	ID=cds-J4731_16435;Parent=gene-J4731_16435;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008911062.1;locus_tag=J4731_16435;product=M13 family metallopeptidase;pseudo=true;transl_table=11
JAGETS010000033.1	Genbank	pseudogene	48450	49420	.	+	.	ID=gene-J4731_16440;Name=cysB;gbkey=Gene;gene=cysB;gene_biotype=pseudogene;locus_tag=J4731_16440;pseudo=true
JAGETS010000033.1	Protein Homology	CDS	48450	49420	.	+	0	ID=cds-J4731_16440;Parent=gene-J4731_16440;Note=frameshifted;gbkey=CDS;gene=cysB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010845971.1;locus_tag=J4731_16440;product=HTH-type transcriptional regulator CysB;pseudo=true;transl_table=11
JAGETS010000033.1	Genbank	pseudogene	49690	52335	.	+	.	ID=gene-J4731_16445;Name=acnA;gbkey=Gene;gene=acnA;gene_biotype=pseudogene;locus_tag=J4731_16445;pseudo=true
JAGETS010000033.1	Protein Homology	CDS	49690	52335	.	+	0	ID=cds-J4731_16445;Parent=gene-J4731_16445;Note=frameshifted%3B internal stop;gbkey=CDS;gene=acnA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460671.1;locus_tag=J4731_16445;product=aconitate hydratase AcnA;pseudo=true;transl_table=11
JAGETS010000033.1	Genbank	gene	52641	53084	.	+	.	ID=gene-J4731_16450;Name=J4731_16450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_16450
JAGETS010000033.1	Protein Homology	CDS	52641	53084	.	+	0	ID=cds-MBO1929407.1;Parent=gene-J4731_16450;Dbxref=NCBI_GP:MBO1929407.1;Name=MBO1929407.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006661698.1;locus_tag=J4731_16450;product=hypothetical protein;protein_id=MBO1929407.1;transl_table=11
JAGETS010000033.1	Genbank	pseudogene	53155	54167	.	-	.	ID=gene-J4731_16455;Name=hemB;gbkey=Gene;gene=hemB;gene_biotype=pseudogene;locus_tag=J4731_16455;pseudo=true
JAGETS010000033.1	Protein Homology	CDS	53155	54167	.	-	0	ID=cds-J4731_16455;Parent=gene-J4731_16455;Note=frameshifted;gbkey=CDS;gene=hemB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012368000.1;locus_tag=J4731_16455;product=porphobilinogen synthase;pseudo=true;transl_table=11
JAGETS010000033.1	Genbank	pseudogene	54356	54948	.	-	.	ID=gene-J4731_16460;Name=ribA;gbkey=Gene;gene=ribA;gene_biotype=pseudogene;locus_tag=J4731_16460;pseudo=true
JAGETS010000033.1	Protein Homology	CDS	54356	54948	.	-	0	ID=cds-J4731_16460;Parent=gene-J4731_16460;Note=frameshifted;gbkey=CDS;gene=ribA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014656044.1;locus_tag=J4731_16460;product=GTP cyclohydrolase II;pseudo=true;transl_table=11
JAGETS010000033.1	Genbank	pseudogene	55162	55876	.	+	.	ID=gene-J4731_16465;Name=J4731_16465;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_16465;pseudo=true
JAGETS010000033.1	Protein Homology	CDS	55162	55876	.	+	0	ID=cds-J4731_16465;Parent=gene-J4731_16465;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004254217.1;locus_tag=J4731_16465;product=phosphatase PAP2 family protein;pseudo=true;transl_table=11
JAGETS010000033.1	Genbank	pseudogene	56021	56332	.	+	.	ID=gene-J4731_16470;Name=J4731_16470;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_16470;pseudo=true
JAGETS010000033.1	Protein Homology	CDS	56021	56332	.	+	0	ID=cds-J4731_16470;Parent=gene-J4731_16470;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004254219.1;locus_tag=J4731_16470;product=DUF1049 domain-containing protein;pseudo=true;transl_table=11
JAGETS010000033.1	Genbank	pseudogene	56339	57509	.	+	.	ID=gene-J4731_16475;Name=lapB;gbkey=Gene;gene=lapB;gene_biotype=pseudogene;locus_tag=J4731_16475;pseudo=true
JAGETS010000033.1	Protein Homology	CDS	56339	57509	.	+	0	ID=cds-J4731_16475;Parent=gene-J4731_16475;Note=frameshifted;gbkey=CDS;gene=lapB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210615.1;locus_tag=J4731_16475;product=lipopolysaccharide assembly protein LapB;pseudo=true;transl_table=11
JAGETS010000033.1	Genbank	pseudogene	57554	58278	.	+	.	ID=gene-J4731_16480;Name=pyrF;gbkey=Gene;gene=pyrF;gene_biotype=pseudogene;locus_tag=J4731_16480;pseudo=true
JAGETS010000033.1	Protein Homology	CDS	57554	58278	.	+	0	ID=cds-J4731_16480;Parent=gene-J4731_16480;Note=frameshifted;gbkey=CDS;gene=pyrF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008911071.1;locus_tag=J4731_16480;product=orotidine-5'-phosphate decarboxylase;pseudo=true;transl_table=11
JAGETS010000033.1	Genbank	pseudogene	58275	58599	.	+	.	ID=gene-J4731_16485;Name=yciH;gbkey=Gene;gene=yciH;gene_biotype=pseudogene;locus_tag=J4731_16485;pseudo=true
JAGETS010000033.1	Protein Homology	CDS	58275	58599	.	+	0	ID=cds-J4731_16485;Parent=gene-J4731_16485;Note=frameshifted;gbkey=CDS;gene=yciH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415798.2;locus_tag=J4731_16485;product=stress response translation initiation inhibitor YciH;pseudo=true;transl_table=11
JAGETS010000033.1	Genbank	pseudogene	58672	58955	.	-	.	ID=gene-J4731_16490;Name=J4731_16490;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_16490;pseudo=true
JAGETS010000033.1	Protein Homology	CDS	58672	58955	.	-	0	ID=cds-J4731_16490;Parent=gene-J4731_16490;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004247538.1;locus_tag=J4731_16490;product=helix-turn-helix domain-containing protein;pseudo=true;transl_table=11
JAGETS010000033.1	Genbank	pseudogene	58968	59236	.	-	.	ID=gene-J4731_16495;Name=J4731_16495;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_16495;pseudo=true
JAGETS010000033.1	Protein Homology	CDS	58968	59236	.	-	0	ID=cds-J4731_16495;Parent=gene-J4731_16495;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001346505.1;locus_tag=J4731_16495;product=type II toxin-antitoxin system RelE/ParE family toxin;pseudo=true;transl_table=11
JAGETS010000033.1	Genbank	pseudogene	59434	59651	.	-	.	ID=gene-J4731_16500;Name=osmB;gbkey=Gene;gene=osmB;gene_biotype=pseudogene;locus_tag=J4731_16500;pseudo=true
JAGETS010000033.1	Protein Homology	CDS	59434	59651	.	-	0	ID=cds-J4731_16500;Parent=gene-J4731_16500;Note=frameshifted;gbkey=CDS;gene=osmB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008911073.1;locus_tag=J4731_16500;product=osmotically-inducible lipoprotein OsmB;pseudo=true;transl_table=11
JAGETS010000033.1	Genbank	pseudogene	59851	61786	.	-	.	ID=gene-J4731_16505;Name=J4731_16505;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_16505;pseudo=true
JAGETS010000033.1	Protein Homology	CDS	59851	61786	.	-	0	ID=cds-J4731_16505;Parent=gene-J4731_16505;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004254232.1;locus_tag=J4731_16505;product=exoribonuclease II;pseudo=true;transl_table=11
JAGETS010000033.1	Genbank	pseudogene	61924	62482	.	-	.	ID=gene-J4731_16510;Name=nth;gbkey=Gene;gene=nth;gene_biotype=pseudogene;locus_tag=J4731_16510;pseudo=true
JAGETS010000033.1	Protein Homology	CDS	61924	62482	.	-	0	ID=cds-J4731_16510;Parent=gene-J4731_16510;Note=frameshifted%3B internal stop;gbkey=CDS;gene=nth;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004720049.1;locus_tag=J4731_16510;product=endonuclease III;pseudo=true;transl_table=11
JAGETS010000033.1	Genbank	pseudogene	62650	63278	.	-	.	ID=gene-J4731_16515;Name=J4731_16515;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_16515;pseudo=true
JAGETS010000033.1	Protein Homology	CDS	62650	63278	.	-	0	ID=cds-J4731_16515;Parent=gene-J4731_16515;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460417.1;locus_tag=J4731_16515;product=electron transport complex subunit E;pseudo=true;transl_table=11
JAGETS010000033.1	Genbank	pseudogene	63278	63900	.	-	.	ID=gene-J4731_16520;Name=rsxG;gbkey=Gene;gene=rsxG;gene_biotype=pseudogene;locus_tag=J4731_16520;pseudo=true
JAGETS010000033.1	Protein Homology	CDS	63278	63900	.	-	0	ID=cds-J4731_16520;Parent=gene-J4731_16520;Note=frameshifted%3B internal stop;gbkey=CDS;gene=rsxG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006812938.1;locus_tag=J4731_16520;product=electron transport complex subunit RsxG;pseudo=true;transl_table=11
JAGETS010000033.1	Genbank	pseudogene	63911	64988	.	-	.	ID=gene-J4731_16525;Name=rsxD;gbkey=Gene;gene=rsxD;gene_biotype=pseudogene;locus_tag=J4731_16525;pseudo=true
JAGETS010000033.1	Protein Homology	CDS	63911	64988	.	-	0	ID=cds-J4731_16525;Parent=gene-J4731_16525;Note=frameshifted;gbkey=CDS;gene=rsxD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210599.1;locus_tag=J4731_16525;product=electron transport complex subunit RsxD;pseudo=true;transl_table=11
JAGETS010000033.1	Genbank	gene	65046	65294	.	-	.	ID=gene-J4731_16530;Name=J4731_16530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_16530
JAGETS010000033.1	GeneMarkS-2+	CDS	65046	65294	.	-	0	ID=cds-MBO1929408.1;Parent=gene-J4731_16530;Dbxref=NCBI_GP:MBO1929408.1;Name=MBO1929408.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_16530;product=hypothetical protein;protein_id=MBO1929408.1;transl_table=11
JAGETS010000033.1	Genbank	pseudogene	65459	67243	.	-	.	ID=gene-J4731_16535;Name=rsxC;gbkey=Gene;gene=rsxC;gene_biotype=pseudogene;locus_tag=J4731_16535;pseudo=true
JAGETS010000033.1	Protein Homology	CDS	65459	67243	.	-	0	ID=cds-J4731_16535;Parent=gene-J4731_16535;Note=frameshifted%3B internal stop;gbkey=CDS;gene=rsxC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005164801.1;locus_tag=J4731_16535;product=electron transport complex subunit RsxC;pseudo=true;transl_table=11
JAGETS010000033.1	Genbank	pseudogene	67289	67910	.	-	.	ID=gene-J4731_16540;Name=rsxB;gbkey=Gene;gene=rsxB;gene_biotype=pseudogene;locus_tag=J4731_16540;pseudo=true
JAGETS010000033.1	Protein Homology	CDS	67289	67910	.	-	0	ID=cds-J4731_16540;Parent=gene-J4731_16540;Note=frameshifted;gbkey=CDS;gene=rsxB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010845873.1;locus_tag=J4731_16540;product=electron transport complex subunit RsxB;pseudo=true;transl_table=11
JAGETS010000033.1	Genbank	pseudogene	67910	68485	.	-	.	ID=gene-J4731_16545;Name=rsxA;gbkey=Gene;gene=rsxA;gene_biotype=pseudogene;locus_tag=J4731_16545;pseudo=true
JAGETS010000033.1	Protein Homology	CDS	67910	68485	.	-	0	ID=cds-J4731_16545;Parent=gene-J4731_16545;Note=frameshifted;gbkey=CDS;gene=rsxA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010845872.1;locus_tag=J4731_16545;product=electron transport complex subunit RsxA;pseudo=true;transl_table=11
JAGETS010000033.1	Genbank	gene	68569	69009	.	-	.	ID=gene-J4731_16550;Name=J4731_16550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_16550
JAGETS010000033.1	Protein Homology	CDS	68569	69009	.	-	0	ID=cds-MBO1929409.1;Parent=gene-J4731_16550;Dbxref=NCBI_GP:MBO1929409.1;Name=MBO1929409.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006659778.1;locus_tag=J4731_16550;product=DUF2569 domain-containing protein;protein_id=MBO1929409.1;transl_table=11
JAGETS010000033.1	Genbank	pseudogene	69138	70168	.	+	.	ID=gene-J4731_16555;Name=J4731_16555;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_16555;pseudo=true
JAGETS010000033.1	Protein Homology	CDS	69138	70168	.	+	0	ID=cds-J4731_16555;Parent=gene-J4731_16555;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006659779.1;locus_tag=J4731_16555;product=oxidoreductase;pseudo=true;transl_table=11
JAGETS010000033.1	Genbank	gene	70261	71202	.	+	.	ID=gene-J4731_16560;Name=J4731_16560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_16560
JAGETS010000033.1	Protein Homology	CDS	70261	71202	.	+	0	ID=cds-MBO1929410.1;Parent=gene-J4731_16560;Dbxref=NCBI_GP:MBO1929410.1;Name=MBO1929410.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024981.1;locus_tag=J4731_16560;product=bile acid:sodium symporter;protein_id=MBO1929410.1;transl_table=11
JAGETS010000033.1	Genbank	pseudogene	71464	72443	.	-	.	ID=gene-J4731_16565;Name=add;gbkey=Gene;gene=add;gene_biotype=pseudogene;locus_tag=J4731_16565;pseudo=true
JAGETS010000033.1	Protein Homology	CDS	71464	72443	.	-	0	ID=cds-J4731_16565;Parent=gene-J4731_16565;Note=frameshifted;gbkey=CDS;gene=add;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010670086.1;locus_tag=J4731_16565;product=adenosine deaminase;pseudo=true;transl_table=11
JAGETS010000033.1	Genbank	pseudogene	72654	74293	.	-	.	ID=gene-J4731_16570;Name=J4731_16570;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_16570;pseudo=true
JAGETS010000033.1	Protein Homology	CDS	72654	74293	.	-	0	ID=cds-J4731_16570;Parent=gene-J4731_16570;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006812947.1;locus_tag=J4731_16570;product=YdgA family protein;pseudo=true;transl_table=11
JAGETS010000033.1	Genbank	pseudogene	74400	75574	.	-	.	ID=gene-J4731_16575;Name=manA;gbkey=Gene;gene=manA;gene_biotype=pseudogene;locus_tag=J4731_16575;pseudo=true
JAGETS010000033.1	Protein Homology	CDS	74400	75574	.	-	0	ID=cds-J4731_16575;Parent=gene-J4731_16575;Note=frameshifted;gbkey=CDS;gene=manA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020078979.1;locus_tag=J4731_16575;product=mannose-6-phosphate isomerase;pseudo=true;transl_table=11
JAGETS010000033.1	Genbank	pseudogene	75753	77144	.	+	.	ID=gene-J4731_16580;Name=fumC;gbkey=Gene;gene=fumC;gene_biotype=pseudogene;locus_tag=J4731_16580;pseudo=true
JAGETS010000033.1	Protein Homology	CDS	75753	77144	.	+	0	ID=cds-J4731_16580;Parent=gene-J4731_16580;Note=frameshifted;gbkey=CDS;gene=fumC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017802256.1;locus_tag=J4731_16580;product=class II fumarate hydratase;pseudo=true;transl_table=11
JAGETS010000033.1	Genbank	pseudogene	77202	78093	.	-	.	ID=gene-J4731_16585;Name=tus;gbkey=Gene;gene=tus;gene_biotype=pseudogene;locus_tag=J4731_16585;pseudo=true
JAGETS010000033.1	Protein Homology	CDS	77202	78093	.	-	0	ID=cds-J4731_16585;Parent=gene-J4731_16585;Note=frameshifted;gbkey=CDS;gene=tus;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008911092.1;locus_tag=J4731_16585;product=DNA replication terminus site-binding protein;pseudo=true;transl_table=11
JAGETS010000033.1	Genbank	pseudogene	78248	78678	.	-	.	ID=gene-J4731_16590;Name=J4731_16590;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_16590;pseudo=true
JAGETS010000033.1	Protein Homology	CDS	78248	78678	.	-	0	ID=cds-J4731_16590;Parent=gene-J4731_16590;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004254296.1;locus_tag=J4731_16590;product=lytic polysaccharide monooxygenase;pseudo=true;transl_table=11
JAGETS010000033.1	Genbank	pseudogene	78903	79974	.	-	.	ID=gene-J4731_16595;Name=J4731_16595;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_16595;pseudo=true
JAGETS010000033.1	Protein Homology	CDS	78903	79974	.	-	0	ID=cds-J4731_16595;Parent=gene-J4731_16595;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009637181.1;locus_tag=J4731_16595;product=MFS transporter;pseudo=true;transl_table=11
JAGETS010000033.1	Genbank	pseudogene	80289	80509	.	+	.	ID=gene-J4731_16600;Name=J4731_16600;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_16600;pseudo=true
JAGETS010000033.1	Protein Homology	CDS	80289	80509	.	+	0	ID=cds-J4731_16600;Parent=gene-J4731_16600;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002383676.1;locus_tag=J4731_16600;product=LysR family transcriptional regulator;pseudo=true;transl_table=11
JAGETS010000033.1	Genbank	gene	80731	80982	.	+	.	ID=gene-J4731_16605;Name=J4731_16605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_16605
JAGETS010000033.1	Protein Homology	CDS	80731	80982	.	+	0	ID=cds-MBO1929411.1;Parent=gene-J4731_16605;Dbxref=NCBI_GP:MBO1929411.1;Name=MBO1929411.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015431.1;locus_tag=J4731_16605;product=hypothetical protein;protein_id=MBO1929411.1;transl_table=11
JAGETS010000033.1	Genbank	gene	80979	81155	.	+	.	ID=gene-J4731_16610;Name=J4731_16610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_16610
JAGETS010000033.1	Protein Homology	CDS	80979	81155	.	+	0	ID=cds-MBO1929412.1;Parent=gene-J4731_16610;Dbxref=NCBI_GP:MBO1929412.1;Name=MBO1929412.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015431.1;locus_tag=J4731_16610;product=hypothetical protein;protein_id=MBO1929412.1;transl_table=11
JAGETS010000033.1	Genbank	pseudogene	81287	82490	.	+	.	ID=gene-J4731_16615;Name=J4731_16615;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_16615;pseudo=true
JAGETS010000033.1	Protein Homology	CDS	81287	82490	.	+	0	ID=cds-J4731_16615;Parent=gene-J4731_16615;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004254305.1;locus_tag=J4731_16615;product=ROK family protein;pseudo=true;transl_table=11
JAGETS010000033.1	Genbank	pseudogene	82632	83317	.	+	.	ID=gene-J4731_16620;Name=bioD;gbkey=Gene;gene=bioD;gene_biotype=pseudogene;locus_tag=J4731_16620;pseudo=true
JAGETS010000033.1	Protein Homology	CDS	82632	83317	.	+	0	ID=cds-J4731_16620;Parent=gene-J4731_16620;Note=frameshifted;gbkey=CDS;gene=bioD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006659791.1;locus_tag=J4731_16620;product=dethiobiotin synthase;pseudo=true;transl_table=11
JAGETS010000033.1	Genbank	pseudogene	83371	83633	.	-	.	ID=gene-J4731_16625;Name=J4731_16625;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_16625;pseudo=true
JAGETS010000033.1	Protein Homology	CDS	83371	83633	.	-	0	ID=cds-J4731_16625;Parent=gene-J4731_16625;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004254311.1;locus_tag=J4731_16625;product=DUF1161 domain-containing protein;pseudo=true;transl_table=11
JAGETS010000033.1	Genbank	pseudogene	83646	84015	.	-	.	ID=gene-J4731_16630;Name=J4731_16630;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_16630;pseudo=true
JAGETS010000033.1	Protein Homology	CDS	83646	84015	.	-	0	ID=cds-J4731_16630;Parent=gene-J4731_16630;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004717421.1;locus_tag=J4731_16630;product=DUF1283 family protein;pseudo=true;transl_table=11
JAGETS010000033.1	Genbank	pseudogene	84097	84835	.	-	.	ID=gene-J4731_16635;Name=J4731_16635;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_16635;pseudo=true
JAGETS010000033.1	Protein Homology	CDS	84097	84835	.	-	0	ID=cds-J4731_16635;Parent=gene-J4731_16635;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004254317.1;locus_tag=J4731_16635;product=SDR family NAD(P)-dependent oxidoreductase;pseudo=true;transl_table=11
JAGETS010000033.1	Genbank	gene	84911	85060	.	-	.	ID=gene-J4731_16640;Name=J4731_16640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_16640
JAGETS010000033.1	Protein Homology	CDS	84911	85060	.	-	0	ID=cds-MBO1929413.1;Parent=gene-J4731_16640;Dbxref=NCBI_GP:MBO1929413.1;Name=MBO1929413.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024985.1;locus_tag=J4731_16640;product=DUF4139 domain-containing protein;protein_id=MBO1929413.1;transl_table=11
JAGETS010000033.1	Genbank	gene	85080	85442	.	-	.	ID=gene-J4731_16645;Name=J4731_16645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_16645
JAGETS010000033.1	Protein Homology	CDS	85080	85442	.	-	0	ID=cds-MBO1929414.1;Parent=gene-J4731_16645;Dbxref=NCBI_GP:MBO1929414.1;Name=MBO1929414.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024985.1;locus_tag=J4731_16645;product=DUF4139 domain-containing protein;protein_id=MBO1929414.1;transl_table=11
JAGETS010000033.1	Genbank	gene	85535	85744	.	-	.	ID=gene-J4731_16650;Name=J4731_16650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_16650
JAGETS010000033.1	Protein Homology	CDS	85535	85744	.	-	0	ID=cds-MBO1929415.1;Parent=gene-J4731_16650;Dbxref=NCBI_GP:MBO1929415.1;Name=MBO1929415.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024985.1;locus_tag=J4731_16650;product=DUF4139 domain-containing protein;protein_id=MBO1929415.1;transl_table=11
JAGETS010000033.1	Genbank	gene	85740	85865	.	-	.	ID=gene-J4731_16655;Name=J4731_16655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_16655
JAGETS010000033.1	Protein Homology	CDS	85740	85865	.	-	0	ID=cds-MBO1929416.1;Parent=gene-J4731_16655;Dbxref=NCBI_GP:MBO1929416.1;Name=MBO1929416.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024985.1;locus_tag=J4731_16655;product=DUF4139 domain-containing protein;protein_id=MBO1929416.1;transl_table=11
JAGETS010000033.1	Genbank	gene	85840	86040	.	-	.	ID=gene-J4731_16660;Name=J4731_16660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_16660
JAGETS010000033.1	GeneMarkS-2+	CDS	85840	86040	.	-	0	ID=cds-MBO1929417.1;Parent=gene-J4731_16660;Dbxref=NCBI_GP:MBO1929417.1;Name=MBO1929417.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_16660;product=hypothetical protein;protein_id=MBO1929417.1;transl_table=11
JAGETS010000033.1	Genbank	gene	86229	86510	.	-	.	ID=gene-J4731_16665;Name=J4731_16665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_16665
JAGETS010000033.1	GeneMarkS-2+	CDS	86229	86510	.	-	0	ID=cds-MBO1929418.1;Parent=gene-J4731_16665;Dbxref=NCBI_GP:MBO1929418.1;Name=MBO1929418.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_16665;product=DUF4140 domain-containing protein;protein_id=MBO1929418.1;transl_table=11
JAGETS010000033.1	Genbank	pseudogene	87063	87538	.	-	.	ID=gene-J4731_16670;Name=J4731_16670;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_16670;pseudo=true
JAGETS010000033.1	Protein Homology	CDS	87063	87538	.	-	0	ID=cds-J4731_16670;Parent=gene-J4731_16670;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004249111.1;locus_tag=J4731_16670;product=Hcp family type VI secretion system effector;pseudo=true;transl_table=11
JAGETS010000033.1	Genbank	gene	88616	88828	.	-	.	ID=gene-J4731_16675;Name=J4731_16675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_16675
JAGETS010000033.1	Protein Homology	CDS	88616	88828	.	-	0	ID=cds-MBO1929419.1;Parent=gene-J4731_16675;Dbxref=NCBI_GP:MBO1929419.1;Name=MBO1929419.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012260.1;locus_tag=J4731_16675;product=hypothetical protein;protein_id=MBO1929419.1;transl_table=11
JAGETS010000033.1	Genbank	gene	88845	88988	.	-	.	ID=gene-J4731_16680;Name=J4731_16680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_16680
JAGETS010000033.1	GeneMarkS-2+	CDS	88845	88988	.	-	0	ID=cds-MBO1929420.1;Parent=gene-J4731_16680;Dbxref=NCBI_GP:MBO1929420.1;Name=MBO1929420.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_16680;product=hypothetical protein;protein_id=MBO1929420.1;transl_table=11
JAGETS010000033.1	Genbank	pseudogene	89216	89476	.	-	.	ID=gene-J4731_16685;Name=J4731_16685;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_16685;pseudo=true
JAGETS010000033.1	Protein Homology	CDS	89216	89476	.	-	0	ID=cds-J4731_16685;Parent=gene-J4731_16685;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004242966.1;locus_tag=J4731_16685;product=DUF3811 domain-containing protein;pseudo=true;transl_table=11
JAGETS010000033.1	Genbank	pseudogene	89632	90714	.	+	.	ID=gene-J4731_16690;Name=mnmH;gbkey=Gene;gene=mnmH;gene_biotype=pseudogene;locus_tag=J4731_16690;pseudo=true
JAGETS010000033.1	Protein Homology	CDS	89632	90714	.	+	0	ID=cds-J4731_16690;Parent=gene-J4731_16690;Note=frameshifted;gbkey=CDS;gene=mnmH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004254328.1;locus_tag=J4731_16690;product=tRNA 2-selenouridine(34) synthase MnmH;pseudo=true;transl_table=11
JAGETS010000033.1	Genbank	pseudogene	90836	91437	.	-	.	ID=gene-J4731_16695;Name=J4731_16695;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_16695;pseudo=true
JAGETS010000033.1	Protein Homology	CDS	90836	91437	.	-	0	ID=cds-J4731_16695;Parent=gene-J4731_16695;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000249004.1;locus_tag=J4731_16695;product=LysE family transporter;pseudo=true;transl_table=11
JAGETS010000033.1	Genbank	pseudogene	91553	91996	.	-	.	ID=gene-J4731_16700;Name=J4731_16700;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_16700;pseudo=true
JAGETS010000033.1	Protein Homology	CDS	91553	91996	.	-	0	ID=cds-J4731_16700;Parent=gene-J4731_16700;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004242949.1;locus_tag=J4731_16700;product=YaiI/YqxD family protein;pseudo=true;transl_table=11
JAGETS010000033.1	Genbank	pseudogene	92075	92561	.	-	.	ID=gene-J4731_16705;Name=J4731_16705;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_16705;pseudo=true
JAGETS010000033.1	Protein Homology	CDS	92075	92561	.	-	0	ID=cds-J4731_16705;Parent=gene-J4731_16705;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120594.1;locus_tag=J4731_16705;product=GNAT family N-acetyltransferase;pseudo=true;transl_table=11
JAGETS010000033.1	Genbank	pseudogene	92649	93829	.	-	.	ID=gene-J4731_16710;Name=J4731_16710;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_16710;pseudo=true
JAGETS010000033.1	Protein Homology	CDS	92649	93829	.	-	0	ID=cds-J4731_16710;Parent=gene-J4731_16710;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004254334.1;locus_tag=J4731_16710;product=MFS transporter;pseudo=true;transl_table=11
JAGETS010000033.1	Genbank	pseudogene	93941	94524	.	+	.	ID=gene-J4731_16715;Name=J4731_16715;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_16715;pseudo=true
JAGETS010000033.1	Protein Homology	CDS	93941	94524	.	+	0	ID=cds-J4731_16715;Parent=gene-J4731_16715;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004254337.1;locus_tag=J4731_16715;product=TetR family transcriptional regulator;pseudo=true;transl_table=11
JAGETS010000033.1	Genbank	gene	94633	94881	.	-	.	ID=gene-J4731_16720;Name=J4731_16720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_16720
JAGETS010000033.1	Protein Homology	CDS	94633	94881	.	-	0	ID=cds-MBO1929421.1;Parent=gene-J4731_16720;Dbxref=NCBI_GP:MBO1929421.1;Name=MBO1929421.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025175.1;locus_tag=J4731_16720;product=hypothetical protein;protein_id=MBO1929421.1;transl_table=11
JAGETS010000033.1	Genbank	gene	94886	95077	.	-	.	ID=gene-J4731_16725;Name=J4731_16725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_16725
JAGETS010000033.1	Protein Homology	CDS	94886	95077	.	-	0	ID=cds-MBO1929422.1;Parent=gene-J4731_16725;Dbxref=NCBI_GP:MBO1929422.1;Name=MBO1929422.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025175.1;locus_tag=J4731_16725;product=DUF4184 family protein;protein_id=MBO1929422.1;transl_table=11
JAGETS010000033.1	Genbank	gene	95011	95319	.	-	.	ID=gene-J4731_16730;Name=J4731_16730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_16730
JAGETS010000033.1	Protein Homology	CDS	95011	95319	.	-	0	ID=cds-MBO1929423.1;Parent=gene-J4731_16730;Dbxref=NCBI_GP:MBO1929423.1;Name=MBO1929423.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025175.1;locus_tag=J4731_16730;product=DUF4184 family protein;protein_id=MBO1929423.1;transl_table=11
JAGETS010000033.1	Genbank	pseudogene	95366	96385	.	-	.	ID=gene-J4731_16735;Name=J4731_16735;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_16735;pseudo=true
JAGETS010000033.1	Protein Homology	CDS	95366	96385	.	-	0	ID=cds-J4731_16735;Parent=gene-J4731_16735;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004254344.1;locus_tag=J4731_16735;product=aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme;pseudo=true;transl_table=11
JAGETS010000033.1	Genbank	pseudogene	96579	97204	.	-	.	ID=gene-J4731_16740;Name=alkB;gbkey=Gene;gene=alkB;gene_biotype=pseudogene;locus_tag=J4731_16740;pseudo=true
JAGETS010000033.1	Protein Homology	CDS	96579	97204	.	-	0	ID=cds-J4731_16740;Parent=gene-J4731_16740;Note=frameshifted;gbkey=CDS;gene=alkB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004919878.1;locus_tag=J4731_16740;product=DNA oxidative demethylase AlkB;pseudo=true;transl_table=11
JAGETS010000033.1	Genbank	pseudogene	97314	98184	.	-	.	ID=gene-J4731_16745;Name=J4731_16745;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_16745;pseudo=true
JAGETS010000033.1	Protein Homology	CDS	97314	98184	.	-	0	ID=cds-J4731_16745;Parent=gene-J4731_16745;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004254350.1;locus_tag=J4731_16745;product=EamA family transporter;pseudo=true;transl_table=11
JAGETS010000033.1	Genbank	pseudogene	98269	98760	.	+	.	ID=gene-J4731_16750;Name=J4731_16750;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_16750;pseudo=true
JAGETS010000033.1	Protein Homology	CDS	98269	98760	.	+	0	ID=cds-J4731_16750;Parent=gene-J4731_16750;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004254353.1;locus_tag=J4731_16750;product=MarR family transcriptional regulator;pseudo=true;transl_table=11
JAGETS010000033.1	Genbank	pseudogene	98806	100806	.	-	.	ID=gene-J4731_16755;Name=J4731_16755;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_16755;pseudo=true
JAGETS010000033.1	Protein Homology	CDS	98806	100806	.	-	0	ID=cds-J4731_16755;Parent=gene-J4731_16755;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004254357.1;locus_tag=J4731_16755;product=SWIM zinc finger family protein;pseudo=true;transl_table=11
JAGETS010000033.1	Genbank	pseudogene	100803	101940	.	-	.	ID=gene-J4731_16760;Name=J4731_16760;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_16760;pseudo=true
JAGETS010000033.1	Protein Homology	CDS	100803	101940	.	-	0	ID=cds-J4731_16760;Parent=gene-J4731_16760;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004254361.1;locus_tag=J4731_16760;product=VWA domain-containing protein;pseudo=true;transl_table=11
##sequence-region JAGETS010000034.1 1 102186
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=587
JAGETS010000034.1	Genbank	region	1	102186	.	+	.	ID=JAGETS010000034.1:1..102186;Dbxref=taxon:587;collected-by=NHLS;collection-date=2018;country=South Africa: Pretoria;gbkey=Src;isolation-source=stool;lat-lon=25.7479 S 28.2293 E;mol_type=genomic DNA;nat-host=porcine;strain=SG003
JAGETS010000034.1	Genbank	pseudogene	1	815	.	-	.	ID=gene-J4731_16765;Name=motB;gbkey=Gene;gene=motB;gene_biotype=pseudogene;locus_tag=J4731_16765;pseudo=true
JAGETS010000034.1	Protein Homology	CDS	1	815	.	-	0	ID=cds-J4731_16765;Parent=gene-J4731_16765;Note=frameshifted%3B internal stop%3B incomplete%3B missing C-terminus;gbkey=CDS;gene=motB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006657489.1;locus_tag=J4731_16765;product=flagellar motor protein MotB;pseudo=true;transl_table=11
JAGETS010000034.1	Genbank	pseudogene	823	1699	.	-	.	ID=gene-J4731_16770;Name=motA;gbkey=Gene;gene=motA;gene_biotype=pseudogene;locus_tag=J4731_16770;pseudo=true
JAGETS010000034.1	Protein Homology	CDS	823	1699	.	-	0	ID=cds-J4731_16770;Parent=gene-J4731_16770;Note=frameshifted;gbkey=CDS;gene=motA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006326150.1;locus_tag=J4731_16770;product=flagellar motor stator protein MotA;pseudo=true;transl_table=11
JAGETS010000034.1	Genbank	pseudogene	1797	2323	.	-	.	ID=gene-J4731_16775;Name=flhC;gbkey=Gene;gene=flhC;gene_biotype=pseudogene;locus_tag=J4731_16775;pseudo=true
JAGETS010000034.1	Protein Homology	CDS	1797	2323	.	-	0	ID=cds-J4731_16775;Parent=gene-J4731_16775;Note=frameshifted;gbkey=CDS;gene=flhC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011411879.1;locus_tag=J4731_16775;product=flagellar transcriptional regulator FlhC;pseudo=true;transl_table=11
JAGETS010000034.1	Genbank	pseudogene	2354	2729	.	-	.	ID=gene-J4731_16780;Name=flhD;gbkey=Gene;gene=flhD;gene_biotype=pseudogene;locus_tag=J4731_16780;pseudo=true
JAGETS010000034.1	Protein Homology	CDS	2354	2729	.	-	0	ID=cds-J4731_16780;Parent=gene-J4731_16780;Note=frameshifted;gbkey=CDS;gene=flhD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006813451.1;locus_tag=J4731_16780;product=flagellar transcriptional regulator FlhD;pseudo=true;transl_table=11
JAGETS010000034.1	Genbank	pseudogene	4346	4797	.	+	.	ID=gene-J4731_16785;Name=J4731_16785;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_16785;pseudo=true
JAGETS010000034.1	Protein Homology	CDS	4346	4797	.	+	0	ID=cds-J4731_16785;Parent=gene-J4731_16785;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004255743.1;locus_tag=J4731_16785;product=hypothetical protein;pseudo=true;transl_table=11
JAGETS010000034.1	Genbank	gene	6525	6593	.	-	.	ID=gene-J4731_16790;Name=J4731_16790;gbkey=Gene;gene_biotype=tRNA;locus_tag=J4731_16790
JAGETS010000034.1	tRNAscan-SE	tRNA	6525	6593	.	-	.	ID=rna-J4731_16790;Parent=gene-J4731_16790;anticodon=(pos:complement(6558..6560));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=J4731_16790;product=tRNA-Lys
JAGETS010000034.1	tRNAscan-SE	exon	6525	6593	.	-	.	ID=exon-J4731_16790-1;Parent=rna-J4731_16790;anticodon=(pos:complement(6558..6560));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=J4731_16790;product=tRNA-Lys
JAGETS010000034.1	Genbank	pseudogene	6848	8233	.	+	.	ID=gene-J4731_16795;Name=cycA;gbkey=Gene;gene=cycA;gene_biotype=pseudogene;gene_synonym=dagA;locus_tag=J4731_16795;pseudo=true
JAGETS010000034.1	Protein Homology	CDS	6848	8233	.	+	0	ID=cds-J4731_16795;Parent=gene-J4731_16795;Note=frameshifted;gbkey=CDS;gene=cycA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012765066.1;locus_tag=J4731_16795;product=D-serine/D-alanine/glycine transporter;pseudo=true;transl_table=11
JAGETS010000034.1	Genbank	pseudogene	8308	9780	.	-	.	ID=gene-J4731_16800;Name=putP;gbkey=Gene;gene=putP;gene_biotype=pseudogene;locus_tag=J4731_16800;pseudo=true
JAGETS010000034.1	Protein Homology	CDS	8308	9780	.	-	0	ID=cds-J4731_16800;Parent=gene-J4731_16800;Note=frameshifted%3B internal stop;gbkey=CDS;gene=putP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004250801.1;locus_tag=J4731_16800;product=sodium/proline symporter PutP;pseudo=true;transl_table=11
JAGETS010000034.1	Genbank	pseudogene	10279	14243	.	+	.	ID=gene-J4731_16805;Name=putA;gbkey=Gene;gene=putA;gene_biotype=pseudogene;locus_tag=J4731_16805;pseudo=true
JAGETS010000034.1	Protein Homology	CDS	10279	14243	.	+	0	ID=cds-J4731_16805;Parent=gene-J4731_16805;Note=frameshifted%3B internal stop;gbkey=CDS;gene=putA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019704328.1;locus_tag=J4731_16805;product=trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase;pseudo=true;transl_table=11
JAGETS010000034.1	Genbank	pseudogene	14448	14976	.	-	.	ID=gene-J4731_16810;Name=fliZ;gbkey=Gene;gene=fliZ;gene_biotype=pseudogene;locus_tag=J4731_16810;pseudo=true
JAGETS010000034.1	Protein Homology	CDS	14448	14976	.	-	0	ID=cds-J4731_16810;Parent=gene-J4731_16810;Note=frameshifted;gbkey=CDS;gene=fliZ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004236794.1;locus_tag=J4731_16810;product=flagella biosynthesis regulatory protein FliZ;pseudo=true;transl_table=11
JAGETS010000034.1	Genbank	pseudogene	16020	16325	.	+	.	ID=gene-J4731_16815;Name=J4731_16815;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_16815;pseudo=true
JAGETS010000034.1	Protein Homology	CDS	16020	16325	.	+	0	ID=cds-J4731_16815;Parent=gene-J4731_16815;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004255760.1;locus_tag=J4731_16815;product=DUF5339 domain-containing protein;pseudo=true;transl_table=11
JAGETS010000034.1	Genbank	pseudogene	16481	19160	.	-	.	ID=gene-J4731_16820;Name=mgtA;gbkey=Gene;gene=mgtA;gene_biotype=pseudogene;locus_tag=J4731_16820;pseudo=true
JAGETS010000034.1	Protein Homology	CDS	16481	19160	.	-	0	ID=cds-J4731_16820;Parent=gene-J4731_16820;Note=frameshifted;gbkey=CDS;gene=mgtA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006813500.1;locus_tag=J4731_16820;product=magnesium-translocating P-type ATPase;pseudo=true;transl_table=11
JAGETS010000034.1	Genbank	pseudogene	19310	19965	.	-	.	ID=gene-J4731_16825;Name=J4731_16825;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_16825;pseudo=true
JAGETS010000034.1	Protein Homology	CDS	19310	19965	.	-	0	ID=cds-J4731_16825;Parent=gene-J4731_16825;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004248352.1;locus_tag=J4731_16825;product=MgtC family protein;pseudo=true;transl_table=11
JAGETS010000034.1	Genbank	gene	20395	20586	.	-	.	ID=gene-J4731_16830;Name=dsrB;gbkey=Gene;gene=dsrB;gene_biotype=protein_coding;locus_tag=J4731_16830
JAGETS010000034.1	Protein Homology	CDS	20395	20586	.	-	0	ID=cds-MBO1929424.1;Parent=gene-J4731_16830;Dbxref=NCBI_GP:MBO1929424.1;Name=MBO1929424.1;gbkey=CDS;gene=dsrB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004243572.1;locus_tag=J4731_16830;product=protein DsrB;protein_id=MBO1929424.1;transl_table=11
JAGETS010000034.1	Genbank	gene	20688	20900	.	-	.	ID=gene-J4731_16835;Name=cspE;gbkey=Gene;gene=cspE;gene_biotype=protein_coding;gene_synonym=gicA,msmC;locus_tag=J4731_16835
JAGETS010000034.1	Protein Homology	CDS	20688	20900	.	-	0	ID=cds-MBO1929425.1;Parent=gene-J4731_16835;Dbxref=NCBI_GP:MBO1929425.1;Name=MBO1929425.1;gbkey=CDS;gene=cspE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004935122.1;locus_tag=J4731_16835;product=transcription antiterminator/RNA stability regulator CspE;protein_id=MBO1929425.1;transl_table=11
JAGETS010000034.1	Genbank	pseudogene	21376	21875	.	+	.	ID=gene-J4731_16840;Name=J4731_16840;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_16840;pseudo=true
JAGETS010000034.1	Protein Homology	CDS	21376	21875	.	+	0	ID=cds-J4731_16840;Parent=gene-J4731_16840;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011146113.1;locus_tag=J4731_16840;product=hypothetical protein;pseudo=true;transl_table=11
JAGETS010000034.1	Genbank	gene	22010	22085	.	+	.	ID=gene-J4731_16845;Name=J4731_16845;gbkey=Gene;gene_biotype=tRNA;locus_tag=J4731_16845
JAGETS010000034.1	tRNAscan-SE	tRNA	22010	22085	.	+	.	ID=rna-J4731_16845;Parent=gene-J4731_16845;anticodon=(pos:22043..22045);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=J4731_16845;product=tRNA-Asn
JAGETS010000034.1	tRNAscan-SE	exon	22010	22085	.	+	.	ID=exon-J4731_16845-1;Parent=rna-J4731_16845;anticodon=(pos:22043..22045);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=J4731_16845;product=tRNA-Asn
JAGETS010000034.1	Genbank	gene	22348	22419	.	+	.	ID=gene-J4731_16850;Name=J4731_16850;gbkey=Gene;gene_biotype=tRNA;locus_tag=J4731_16850
JAGETS010000034.1	tRNAscan-SE	tRNA	22348	22419	.	+	.	ID=rna-J4731_16850;Parent=gene-J4731_16850;anticodon=(pos:22380..22382);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=J4731_16850;product=tRNA-Asn
JAGETS010000034.1	tRNAscan-SE	exon	22348	22419	.	+	.	ID=exon-J4731_16850-1;Parent=rna-J4731_16850;anticodon=(pos:22380..22382);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=J4731_16850;product=tRNA-Asn
JAGETS010000034.1	Genbank	pseudogene	22625	23669	.	+	.	ID=gene-J4731_16855;Name=pyrC;gbkey=Gene;gene=pyrC;gene_biotype=pseudogene;locus_tag=J4731_16855;pseudo=true
JAGETS010000034.1	Protein Homology	CDS	22625	23669	.	+	0	ID=cds-J4731_16855;Parent=gene-J4731_16855;Note=frameshifted;gbkey=CDS;gene=pyrC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010847236.1;locus_tag=J4731_16855;product=dihydroorotase;pseudo=true;transl_table=11
JAGETS010000034.1	Genbank	gene	23906	24139	.	+	.	ID=gene-J4731_16860;Name=bssS;gbkey=Gene;gene=bssS;gene_biotype=protein_coding;locus_tag=J4731_16860
JAGETS010000034.1	Protein Homology	CDS	23906	24139	.	+	0	ID=cds-MBO1929426.1;Parent=gene-J4731_16860;Dbxref=NCBI_GP:MBO1929426.1;Name=MBO1929426.1;gbkey=CDS;gene=bssS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004236879.1;locus_tag=J4731_16860;product=biofilm formation regulator BssS;protein_id=MBO1929426.1;transl_table=11
JAGETS010000034.1	Genbank	pseudogene	24646	24938	.	+	.	ID=gene-J4731_16865;Name=J4731_16865;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_16865;pseudo=true
JAGETS010000034.1	Protein Homology	CDS	24646	24938	.	+	0	ID=cds-J4731_16865;Parent=gene-J4731_16865;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006813506.1;locus_tag=J4731_16865;product=LuxR family transcriptional regulator;pseudo=true;transl_table=11
JAGETS010000034.1	Genbank	pseudogene	25084	25536	.	-	.	ID=gene-J4731_16870;Name=J4731_16870;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_16870;pseudo=true
JAGETS010000034.1	Protein Homology	CDS	25084	25536	.	-	0	ID=cds-J4731_16870;Parent=gene-J4731_16870;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006537194.1;locus_tag=J4731_16870;product=Hsp20 family protein;pseudo=true;transl_table=11
JAGETS010000034.1	Genbank	pseudogene	25861	26886	.	-	.	ID=gene-J4731_16875;Name=J4731_16875;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_16875;pseudo=true
JAGETS010000034.1	Protein Homology	CDS	25861	26886	.	-	0	ID=cds-J4731_16875;Parent=gene-J4731_16875;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004255839.1;locus_tag=J4731_16875;product=rhodanese-related sulfurtransferase;pseudo=true;transl_table=11
JAGETS010000034.1	Genbank	pseudogene	27181	27772	.	+	.	ID=gene-J4731_16880;Name=J4731_16880;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_16880;pseudo=true
JAGETS010000034.1	Protein Homology	CDS	27181	27772	.	+	0	ID=cds-J4731_16880;Parent=gene-J4731_16880;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004255842.1;locus_tag=J4731_16880;product=DUF1007 family protein;pseudo=true;transl_table=11
JAGETS010000034.1	Genbank	pseudogene	27763	28758	.	+	.	ID=gene-J4731_16885;Name=J4731_16885;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_16885;pseudo=true
JAGETS010000034.1	Protein Homology	CDS	27763	28758	.	+	0	ID=cds-J4731_16885;Parent=gene-J4731_16885;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004918498.1;locus_tag=J4731_16885;product=nickel/cobalt transporter;pseudo=true;transl_table=11
JAGETS010000034.1	Genbank	pseudogene	28924	31980	.	-	.	ID=gene-J4731_16890;Name=ttrA;gbkey=Gene;gene=ttrA;gene_biotype=pseudogene;locus_tag=J4731_16890;pseudo=true
JAGETS010000034.1	Protein Homology	CDS	28924	31980	.	-	0	ID=cds-J4731_16890;Parent=gene-J4731_16890;Note=frameshifted;gbkey=CDS;gene=ttrA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001472316.1;locus_tag=J4731_16890;product=tetrathionate reductase subunit TtrA;pseudo=true;transl_table=11
JAGETS010000034.1	Genbank	gene	31973	32290	.	-	.	ID=gene-J4731_16895;Name=J4731_16895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_16895
JAGETS010000034.1	GeneMarkS-2+	CDS	31973	32290	.	-	0	ID=cds-MBO1929427.1;Parent=gene-J4731_16895;Dbxref=NCBI_GP:MBO1929427.1;Name=MBO1929427.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_16895;product=hypothetical protein;protein_id=MBO1929427.1;transl_table=11
JAGETS010000034.1	Genbank	gene	32257	32964	.	-	.	ID=gene-J4731_16900;Name=nrfD;gbkey=Gene;gene=nrfD;gene_biotype=protein_coding;locus_tag=J4731_16900
JAGETS010000034.1	Protein Homology	CDS	32257	32964	.	-	0	ID=cds-MBO1929428.1;Parent=gene-J4731_16900;Dbxref=NCBI_GP:MBO1929428.1;Name=MBO1929428.1;gbkey=CDS;gene=nrfD;inference=COORDINATES: protein motif:HMM:NF015851.1;locus_tag=J4731_16900;product=polysulfide reductase NrfD;protein_id=MBO1929428.1;transl_table=11
JAGETS010000034.1	Genbank	pseudogene	32846	33729	.	-	.	ID=gene-J4731_16905;Name=ttrB;gbkey=Gene;gene=ttrB;gene_biotype=pseudogene;locus_tag=J4731_16905;pseudo=true
JAGETS010000034.1	Protein Homology	CDS	32846	33729	.	-	0	ID=cds-J4731_16905;Parent=gene-J4731_16905;Note=frameshifted;gbkey=CDS;gene=ttrB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001611825.1;locus_tag=J4731_16905;product=tetrathionate reductase subunit TtrB;pseudo=true;transl_table=11
JAGETS010000034.1	Genbank	pseudogene	34026	35716	.	+	.	ID=gene-J4731_16910;Name=J4731_16910;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_16910;pseudo=true
JAGETS010000034.1	Protein Homology	CDS	34026	35716	.	+	0	ID=cds-J4731_16910;Parent=gene-J4731_16910;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004255859.1;locus_tag=J4731_16910;product=PhnD/SsuA/transferrin family substrate-binding protein;pseudo=true;transl_table=11
JAGETS010000034.1	Genbank	pseudogene	35842	36434	.	+	.	ID=gene-J4731_16915;Name=J4731_16915;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_16915;pseudo=true
JAGETS010000034.1	Protein Homology	CDS	35842	36434	.	+	0	ID=cds-J4731_16915;Parent=gene-J4731_16915;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005183291.1;locus_tag=J4731_16915;product=response regulator transcription factor;pseudo=true;transl_table=11
JAGETS010000034.1	Genbank	pseudogene	36493	37431	.	+	.	ID=gene-J4731_16920;Name=lpxL;gbkey=Gene;gene=lpxL;gene_biotype=pseudogene;locus_tag=J4731_16920;pseudo=true
JAGETS010000034.1	Protein Homology	CDS	36493	37431	.	+	0	ID=cds-J4731_16920;Parent=gene-J4731_16920;Note=frameshifted%3B internal stop;gbkey=CDS;gene=lpxL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008911746.1;locus_tag=J4731_16920;product=LpxL/LpxP family Kdo(2)-lipid IV(A) lauroyl/palmitoleoyl acyltransferase;pseudo=true;transl_table=11
JAGETS010000034.1	Genbank	pseudogene	37625	38880	.	+	.	ID=gene-J4731_16925;Name=mdtG;gbkey=Gene;gene=mdtG;gene_biotype=pseudogene;locus_tag=J4731_16925;pseudo=true
JAGETS010000034.1	Protein Homology	CDS	37625	38880	.	+	0	ID=cds-J4731_16925;Parent=gene-J4731_16925;Note=frameshifted;gbkey=CDS;gene=mdtG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004255869.1;locus_tag=J4731_16925;product=multidrug efflux MFS transporter MdtG;pseudo=true;transl_table=11
JAGETS010000034.1	Genbank	pseudogene	39223	40742	.	+	.	ID=gene-J4731_16930;Name=J4731_16930;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_16930;pseudo=true
JAGETS010000034.1	Protein Homology	CDS	39223	40742	.	+	0	ID=cds-J4731_16930;Parent=gene-J4731_16930;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004918490.1;locus_tag=J4731_16930;product=peptide MFS transporter;pseudo=true;transl_table=11
JAGETS010000034.1	Genbank	pseudogene	40870	41677	.	+	.	ID=gene-J4731_16935;Name=J4731_16935;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_16935;pseudo=true
JAGETS010000034.1	Protein Homology	CDS	40870	41677	.	+	0	ID=cds-J4731_16935;Parent=gene-J4731_16935;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004255874.1;locus_tag=J4731_16935;product=PhzF family phenazine biosynthesis protein;pseudo=true;transl_table=11
JAGETS010000034.1	Genbank	pseudogene	41950	43356	.	+	.	ID=gene-J4731_16940;Name=J4731_16940;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_16940;pseudo=true
JAGETS010000034.1	Protein Homology	CDS	41950	43356	.	+	0	ID=cds-J4731_16940;Parent=gene-J4731_16940;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004255876.1;locus_tag=J4731_16940;product=FAD-binding oxidoreductase;pseudo=true;transl_table=11
JAGETS010000034.1	Genbank	gene	43498	43791	.	-	.	ID=gene-J4731_16945;Name=J4731_16945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_16945
JAGETS010000034.1	GeneMarkS-2+	CDS	43498	43791	.	-	0	ID=cds-MBO1929429.1;Parent=gene-J4731_16945;Dbxref=NCBI_GP:MBO1929429.1;Name=MBO1929429.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_16945;product=hypothetical protein;protein_id=MBO1929429.1;transl_table=11
JAGETS010000034.1	Genbank	pseudogene	44058	44418	.	+	.	ID=gene-J4731_16950;Name=J4731_16950;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_16950;pseudo=true
JAGETS010000034.1	Protein Homology	CDS	44058	44418	.	+	0	ID=cds-J4731_16950;Parent=gene-J4731_16950;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015461580.1;locus_tag=J4731_16950;product=acyl-CoA thioesterase;pseudo=true;transl_table=11
JAGETS010000034.1	Genbank	pseudogene	44929	45498	.	+	.	ID=gene-J4731_16955;Name=J4731_16955;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_16955;pseudo=true
JAGETS010000034.1	Protein Homology	CDS	44929	45498	.	+	0	ID=cds-J4731_16955;Parent=gene-J4731_16955;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006657904.1;locus_tag=J4731_16955;product=sel1 repeat family protein;pseudo=true;transl_table=11
JAGETS010000034.1	Genbank	pseudogene	45683	46116	.	+	.	ID=gene-J4731_16960;Name=J4731_16960;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_16960;pseudo=true
JAGETS010000034.1	Protein Homology	CDS	45683	46116	.	+	0	ID=cds-J4731_16960;Parent=gene-J4731_16960;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004255887.1;locus_tag=J4731_16960;product=universal stress protein;pseudo=true;transl_table=11
JAGETS010000034.1	Genbank	pseudogene	46304	46810	.	-	.	ID=gene-J4731_16965;Name=J4731_16965;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_16965;pseudo=true
JAGETS010000034.1	Protein Homology	CDS	46304	46810	.	-	0	ID=cds-J4731_16965;Parent=gene-J4731_16965;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014658003.1;locus_tag=J4731_16965;product=N-acetyltransferase;pseudo=true;transl_table=11
JAGETS010000034.1	Genbank	pseudogene	46895	48126	.	-	.	ID=gene-J4731_16970;Name=agp;gbkey=Gene;gene=agp;gene_biotype=pseudogene;locus_tag=J4731_16970;pseudo=true
JAGETS010000034.1	Protein Homology	CDS	46895	48126	.	-	0	ID=cds-J4731_16970;Parent=gene-J4731_16970;Note=frameshifted%3B internal stop;gbkey=CDS;gene=agp;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012145882.1;locus_tag=J4731_16970;product=bifunctional glucose-1-phosphatase/inositol phosphatase;pseudo=true;transl_table=11
JAGETS010000034.1	Genbank	pseudogene	48344	48789	.	+	.	ID=gene-J4731_16975;Name=J4731_16975;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_16975;pseudo=true
JAGETS010000034.1	Protein Homology	CDS	48344	48789	.	+	0	ID=cds-J4731_16975;Parent=gene-J4731_16975;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017693980.1;locus_tag=J4731_16975;product=GNAT family N-acetyltransferase;pseudo=true;transl_table=11
JAGETS010000034.1	Genbank	pseudogene	48786	49351	.	+	.	ID=gene-J4731_16980;Name=J4731_16980;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_16980;pseudo=true
JAGETS010000034.1	Protein Homology	CDS	48786	49351	.	+	0	ID=cds-J4731_16980;Parent=gene-J4731_16980;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004255898.1;locus_tag=J4731_16980;product=GNAT family N-acetyltransferase;pseudo=true;transl_table=11
JAGETS010000034.1	Genbank	pseudogene	49442	50078	.	-	.	ID=gene-J4731_16985;Name=fdnI;gbkey=Gene;gene=fdnI;gene_biotype=pseudogene;locus_tag=J4731_16985;pseudo=true
JAGETS010000034.1	Protein Homology	CDS	49442	50078	.	-	0	ID=cds-J4731_16985;Parent=gene-J4731_16985;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;gene=fdnI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006819927.1;locus_tag=J4731_16985;product=formate dehydrogenase-N subunit gamma;pseudo=true;transl_table=11
JAGETS010000034.1	Genbank	pseudogene	50071	50958	.	-	.	ID=gene-J4731_16990;Name=fdxH;gbkey=Gene;gene=fdxH;gene_biotype=pseudogene;locus_tag=J4731_16990;pseudo=true
JAGETS010000034.1	Protein Homology	CDS	50071	50958	.	-	0	ID=cds-J4731_16990;Parent=gene-J4731_16990;Note=frameshifted;gbkey=CDS;gene=fdxH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460528.1;locus_tag=J4731_16990;product=formate dehydrogenase subunit beta;pseudo=true;transl_table=11
JAGETS010000034.1	Genbank	pseudogene	50969	53997	.	-	.	ID=gene-J4731_16995;Name=fdnG;gbkey=Gene;gene=fdnG;gene_biotype=pseudogene;locus_tag=J4731_16995;pseudo=true
JAGETS010000034.1	Protein Homology	CDS	50969	53997	.	-	0	ID=cds-J4731_16995;Parent=gene-J4731_16995;Note=frameshifted%3B internal stop;gbkey=CDS;gene=fdnG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310105.1;locus_tag=J4731_16995;product=formate dehydrogenase-N subunit alpha;pseudo=true;transl_table=11
JAGETS010000034.1	Genbank	pseudogene	54398	54722	.	-	.	ID=gene-J4731_17000;Name=J4731_17000;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_17000;pseudo=true
JAGETS010000034.1	Protein Homology	CDS	54398	54722	.	-	0	ID=cds-J4731_17000;Parent=gene-J4731_17000;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004255956.1;locus_tag=J4731_17000;product=YnfA family protein;pseudo=true;transl_table=11
JAGETS010000034.1	Genbank	gene	54786	55052	.	-	.	ID=gene-J4731_17005;Name=J4731_17005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_17005
JAGETS010000034.1	Protein Homology	CDS	54786	55052	.	-	0	ID=cds-MBO1929430.1;Parent=gene-J4731_17005;Dbxref=NCBI_GP:MBO1929430.1;Name=MBO1929430.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004255963.1;locus_tag=J4731_17005;product=DUF2798 domain-containing protein;protein_id=MBO1929430.1;transl_table=11
JAGETS010000034.1	Genbank	pseudogene	55753	55965	.	+	.	ID=gene-J4731_17010;Name=J4731_17010;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_17010;pseudo=true
JAGETS010000034.1	Protein Homology	CDS	55753	55965	.	+	0	ID=cds-J4731_17010;Parent=gene-J4731_17010;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004255968.1;locus_tag=J4731_17010;product=modulator protein;pseudo=true;transl_table=11
JAGETS010000034.1	Genbank	gene	56034	56324	.	-	.	ID=gene-J4731_17015;Name=J4731_17015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_17015
JAGETS010000034.1	Protein Homology	CDS	56034	56324	.	-	0	ID=cds-MBO1929431.1;Parent=gene-J4731_17015;Dbxref=NCBI_GP:MBO1929431.1;Name=MBO1929431.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015925.1;locus_tag=J4731_17015;product=antibiotic biosynthesis monooxygenase;protein_id=MBO1929431.1;transl_table=11
JAGETS010000034.1	Genbank	pseudogene	56659	57585	.	-	.	ID=gene-J4731_17020;Name=add;gbkey=Gene;gene=add;gene_biotype=pseudogene;locus_tag=J4731_17020;pseudo=true
JAGETS010000034.1	Protein Homology	CDS	56659	57585	.	-	0	ID=cds-J4731_17020;Parent=gene-J4731_17020;Note=frameshifted;gbkey=CDS;gene=add;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015379361.1;locus_tag=J4731_17020;product=adenosine deaminase;pseudo=true;transl_table=11
JAGETS010000034.1	Genbank	pseudogene	58489	58915	.	-	.	ID=gene-J4731_17025;Name=J4731_17025;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_17025;pseudo=true
JAGETS010000034.1	Protein Homology	CDS	58489	58915	.	-	0	ID=cds-J4731_17025;Parent=gene-J4731_17025;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006813531.1;locus_tag=J4731_17025;product=TOBE domain-containing protein;pseudo=true;transl_table=11
JAGETS010000034.1	Genbank	pseudogene	58932	59640	.	-	.	ID=gene-J4731_17030;Name=J4731_17030;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_17030;pseudo=true
JAGETS010000034.1	Protein Homology	CDS	58932	59640	.	-	0	ID=cds-J4731_17030;Parent=gene-J4731_17030;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004918281.1;locus_tag=J4731_17030;product=YnfC family lipoprotein;pseudo=true;transl_table=11
JAGETS010000034.1	Genbank	pseudogene	59877	60769	.	-	.	ID=gene-J4731_17035;Name=J4731_17035;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_17035;pseudo=true
JAGETS010000034.1	Protein Homology	CDS	59877	60769	.	-	0	ID=cds-J4731_17035;Parent=gene-J4731_17035;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004255980.1;locus_tag=J4731_17035;product=pirin family protein;pseudo=true;transl_table=11
JAGETS010000034.1	Genbank	pseudogene	60797	61035	.	-	.	ID=gene-J4731_17040;Name=J4731_17040;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_17040;pseudo=true
JAGETS010000034.1	Protein Homology	CDS	60797	61035	.	-	0	ID=cds-J4731_17040;Parent=gene-J4731_17040;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001203832.1;locus_tag=J4731_17040;product=N-acetyltransferase;pseudo=true;transl_table=11
JAGETS010000034.1	Genbank	pseudogene	61274	61947	.	-	.	ID=gene-J4731_17045;Name=J4731_17045;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_17045;pseudo=true
JAGETS010000034.1	Protein Homology	CDS	61274	61947	.	-	0	ID=cds-J4731_17045;Parent=gene-J4731_17045;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014657981.1;locus_tag=J4731_17045;product=hypothetical protein;pseudo=true;transl_table=11
JAGETS010000034.1	Genbank	pseudogene	62990	63489	.	+	.	ID=gene-J4731_17050;Name=tssB;gbkey=Gene;gene=tssB;gene_biotype=pseudogene;locus_tag=J4731_17050;pseudo=true
JAGETS010000034.1	Protein Homology	CDS	62990	63489	.	+	0	ID=cds-J4731_17050;Parent=gene-J4731_17050;Note=frameshifted;gbkey=CDS;gene=tssB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011193202.1;locus_tag=J4731_17050;product=type VI secretion system contractile sheath small subunit;pseudo=true;transl_table=11
JAGETS010000034.1	Genbank	pseudogene	63578	64981	.	+	.	ID=gene-J4731_17055;Name=tssC;gbkey=Gene;gene=tssC;gene_biotype=pseudogene;locus_tag=J4731_17055;pseudo=true
JAGETS010000034.1	Protein Homology	CDS	63578	64981	.	+	0	ID=cds-J4731_17055;Parent=gene-J4731_17055;Note=frameshifted;gbkey=CDS;gene=tssC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002355261.1;locus_tag=J4731_17055;product=type VI secretion system contractile sheath large subunit;pseudo=true;transl_table=11
JAGETS010000034.1	Genbank	pseudogene	64987	65417	.	+	.	ID=gene-J4731_17060;Name=tssE;gbkey=Gene;gene=tssE;gene_biotype=pseudogene;locus_tag=J4731_17060;pseudo=true
JAGETS010000034.1	Protein Homology	CDS	64987	65417	.	+	0	ID=cds-J4731_17060;Parent=gene-J4731_17060;Note=frameshifted;gbkey=CDS;gene=tssE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017827035.1;locus_tag=J4731_17060;product=type VI secretion system baseplate subunit TssE;pseudo=true;transl_table=11
JAGETS010000034.1	Genbank	gene	65676	65891	.	+	.	ID=gene-J4731_17065;Name=J4731_17065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_17065
JAGETS010000034.1	GeneMarkS-2+	CDS	65676	65891	.	+	0	ID=cds-MBO1929432.1;Parent=gene-J4731_17065;Dbxref=NCBI_GP:MBO1929432.1;Name=MBO1929432.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_17065;product=hypothetical protein;protein_id=MBO1929432.1;transl_table=11
JAGETS010000034.1	Genbank	gene	66042	66161	.	+	.	ID=gene-J4731_17070;Name=J4731_17070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_17070
JAGETS010000034.1	GeneMarkS-2+	CDS	66042	66161	.	+	0	ID=cds-MBO1929433.1;Parent=gene-J4731_17070;Dbxref=NCBI_GP:MBO1929433.1;Name=MBO1929433.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_17070;product=type VI secretion system baseplate subunit TssF;protein_id=MBO1929433.1;transl_table=11
JAGETS010000034.1	Genbank	pseudogene	67098	68107	.	+	.	ID=gene-J4731_17075;Name=tssG;gbkey=Gene;gene=tssG;gene_biotype=pseudogene;locus_tag=J4731_17075;pseudo=true
JAGETS010000034.1	Protein Homology	CDS	67098	68107	.	+	0	ID=cds-J4731_17075;Parent=gene-J4731_17075;Note=frameshifted%3B internal stop;gbkey=CDS;gene=tssG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011144757.1;locus_tag=J4731_17075;product=type VI secretion system baseplate subunit TssG;pseudo=true;transl_table=11
JAGETS010000034.1	Genbank	pseudogene	68145	69405	.	+	.	ID=gene-J4731_17080;Name=tagH;gbkey=Gene;gene=tagH;gene_biotype=pseudogene;locus_tag=J4731_17080;pseudo=true
JAGETS010000034.1	Protein Homology	CDS	68145	69405	.	+	0	ID=cds-J4731_17080;Parent=gene-J4731_17080;Note=frameshifted;gbkey=CDS;gene=tagH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004251978.1;locus_tag=J4731_17080;product=type VI secretion system-associated FHA domain protein TagH;pseudo=true;transl_table=11
JAGETS010000034.1	Genbank	pseudogene	69407	69956	.	+	.	ID=gene-J4731_17085;Name=tssJ;gbkey=Gene;gene=tssJ;gene_biotype=pseudogene;locus_tag=J4731_17085;pseudo=true
JAGETS010000034.1	Protein Homology	CDS	69407	69956	.	+	0	ID=cds-J4731_17085;Parent=gene-J4731_17085;Note=frameshifted;gbkey=CDS;gene=tssJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004255999.1;locus_tag=J4731_17085;product=type VI secretion system lipoprotein TssJ;pseudo=true;transl_table=11
JAGETS010000034.1	Genbank	pseudogene	69949	71310	.	+	.	ID=gene-J4731_17090;Name=tssK;gbkey=Gene;gene=tssK;gene_biotype=pseudogene;locus_tag=J4731_17090;pseudo=true
JAGETS010000034.1	Protein Homology	CDS	69949	71310	.	+	0	ID=cds-J4731_17090;Parent=gene-J4731_17090;Note=frameshifted;gbkey=CDS;gene=tssK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004256001.1;locus_tag=J4731_17090;product=type VI secretion system baseplate subunit TssK;pseudo=true;transl_table=11
JAGETS010000034.1	Genbank	pseudogene	71303	72057	.	+	.	ID=gene-J4731_17095;Name=icmH;gbkey=Gene;gene=icmH;gene_biotype=pseudogene;locus_tag=J4731_17095;pseudo=true
JAGETS010000034.1	Protein Homology	CDS	71303	72057	.	+	0	ID=cds-J4731_17095;Parent=gene-J4731_17095;Note=frameshifted;gbkey=CDS;gene=icmH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017628434.1;locus_tag=J4731_17095;product=type IVB secretion system protein IcmH/DotU;pseudo=true;transl_table=11
JAGETS010000034.1	Genbank	gene	72248	72499	.	+	.	ID=gene-J4731_17100;Name=J4731_17100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_17100
JAGETS010000034.1	GeneMarkS-2+	CDS	72248	72499	.	+	0	ID=cds-MBO1929434.1;Parent=gene-J4731_17100;Dbxref=NCBI_GP:MBO1929434.1;Name=MBO1929434.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_17100;product=hypothetical protein;protein_id=MBO1929434.1;transl_table=11
JAGETS010000034.1	Genbank	pseudogene	72616	73421	.	+	.	ID=gene-J4731_17105;Name=J4731_17105;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_17105;pseudo=true
JAGETS010000034.1	Protein Homology	CDS	72616	73421	.	+	0	ID=cds-J4731_17105;Parent=gene-J4731_17105;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004200969.1;locus_tag=J4731_17105;product=AAA family ATPase;pseudo=true;transl_table=11
JAGETS010000034.1	Genbank	gene	73414	73563	.	+	.	ID=gene-J4731_17110;Name=J4731_17110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_17110
JAGETS010000034.1	GeneMarkS-2+	CDS	73414	73563	.	+	0	ID=cds-MBO1929435.1;Parent=gene-J4731_17110;Dbxref=NCBI_GP:MBO1929435.1;Name=MBO1929435.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_17110;product=hypothetical protein;protein_id=MBO1929435.1;transl_table=11
JAGETS010000034.1	Genbank	pseudogene	73697	74776	.	+	.	ID=gene-J4731_17115;Name=J4731_17115;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_17115;pseudo=true
JAGETS010000034.1	Protein Homology	CDS	73697	74776	.	+	0	ID=cds-J4731_17115;Parent=gene-J4731_17115;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001349031.1;locus_tag=J4731_17115;product=AAA family ATPase;pseudo=true;transl_table=11
JAGETS010000034.1	Genbank	gene	75378	75443	.	+	.	ID=gene-J4731_17120;Name=J4731_17120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_17120
JAGETS010000034.1	Protein Homology	CDS	75378	75443	.	+	0	ID=cds-MBO1929436.1;Parent=gene-J4731_17120;Dbxref=NCBI_GP:MBO1929436.1;Name=MBO1929436.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014950.1;locus_tag=J4731_17120;product=hypothetical protein;protein_id=MBO1929436.1;transl_table=11
JAGETS010000034.1	Genbank	pseudogene	75477	76090	.	+	.	ID=gene-J4731_17125;Name=tagO;gbkey=Gene;gene=tagO;gene_biotype=pseudogene;locus_tag=J4731_17125;pseudo=true
JAGETS010000034.1	Protein Homology	CDS	75477	76090	.	+	0	ID=cds-J4731_17125;Parent=gene-J4731_17125;Note=frameshifted;gbkey=CDS;gene=tagO;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004244612.1;locus_tag=J4731_17125;product=type VI secretion system-associated protein TagO;pseudo=true;transl_table=11
JAGETS010000034.1	Genbank	pseudogene	76096	77528	.	+	.	ID=gene-J4731_17130;Name=tssA;gbkey=Gene;gene=tssA;gene_biotype=pseudogene;locus_tag=J4731_17130;pseudo=true
JAGETS010000034.1	Protein Homology	CDS	76096	77528	.	+	0	ID=cds-J4731_17130;Parent=gene-J4731_17130;Note=frameshifted;gbkey=CDS;gene=tssA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004244611.1;locus_tag=J4731_17130;product=type VI secretion system protein TssA;pseudo=true;transl_table=11
JAGETS010000034.1	Genbank	pseudogene	77528	81060	.	+	.	ID=gene-J4731_17135;Name=tssM;gbkey=Gene;gene=tssM;gene_biotype=pseudogene;locus_tag=J4731_17135;pseudo=true
JAGETS010000034.1	Protein Homology	CDS	77528	81060	.	+	0	ID=cds-J4731_17135;Parent=gene-J4731_17135;Note=frameshifted%3B internal stop;gbkey=CDS;gene=tssM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004256019.1;locus_tag=J4731_17135;product=type VI secretion system membrane subunit TssM;pseudo=true;transl_table=11
JAGETS010000034.1	Genbank	gene	82034	82288	.	+	.	ID=gene-J4731_17140;Name=J4731_17140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_17140
JAGETS010000034.1	Protein Homology	CDS	82034	82288	.	+	0	ID=cds-MBO1929437.1;Parent=gene-J4731_17140;Dbxref=NCBI_GP:MBO1929437.1;Name=MBO1929437.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF023902.1;locus_tag=J4731_17140;product=hypothetical protein;protein_id=MBO1929437.1;transl_table=11
JAGETS010000034.1	Genbank	pseudogene	82359	84047	.	+	.	ID=gene-J4731_17145;Name=J4731_17145;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_17145;pseudo=true
JAGETS010000034.1	Protein Homology	CDS	82359	84047	.	+	0	ID=cds-J4731_17145;Parent=gene-J4731_17145;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004247642.1;locus_tag=J4731_17145;product=type VI secretion system baseplate subunit TssF;pseudo=true;transl_table=11
JAGETS010000034.1	Genbank	gene	84382	84717	.	-	.	ID=gene-J4731_17150;Name=J4731_17150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_17150
JAGETS010000034.1	Protein Homology	CDS	84382	84717	.	-	0	ID=cds-MBO1929438.1;Parent=gene-J4731_17150;Dbxref=NCBI_GP:MBO1929438.1;Name=MBO1929438.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004256028.1;locus_tag=J4731_17150;product=hypothetical protein;protein_id=MBO1929438.1;transl_table=11
JAGETS010000034.1	Genbank	pseudogene	84736	85361	.	-	.	ID=gene-J4731_17155;Name=J4731_17155;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_17155;pseudo=true
JAGETS010000034.1	Protein Homology	CDS	84736	85361	.	-	0	ID=cds-J4731_17155;Parent=gene-J4731_17155;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004256029.1;locus_tag=J4731_17155;product=DUF1851 domain-containing protein;pseudo=true;transl_table=11
JAGETS010000034.1	Genbank	pseudogene	85456	85846	.	-	.	ID=gene-J4731_17160;Name=J4731_17160;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_17160;pseudo=true
JAGETS010000034.1	Protein Homology	CDS	85456	85846	.	-	0	ID=cds-J4731_17160;Parent=gene-J4731_17160;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004244639.1;locus_tag=J4731_17160;product=thioredoxin family protein;pseudo=true;transl_table=11
JAGETS010000034.1	Genbank	pseudogene	85839	87126	.	-	.	ID=gene-J4731_17165;Name=J4731_17165;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_17165;pseudo=true
JAGETS010000034.1	Protein Homology	CDS	85839	87126	.	-	0	ID=cds-J4731_17165;Parent=gene-J4731_17165;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017628429.1;locus_tag=J4731_17165;product=hypothetical protein;pseudo=true;transl_table=11
JAGETS010000034.1	Genbank	pseudogene	87152	88104	.	-	.	ID=gene-J4731_17170;Name=J4731_17170;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_17170;pseudo=true
JAGETS010000034.1	Protein Homology	CDS	87152	88104	.	-	0	ID=cds-J4731_17170;Parent=gene-J4731_17170;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012367733.1;locus_tag=J4731_17170;product=hypothetical protein;pseudo=true;transl_table=11
JAGETS010000034.1	Genbank	gene	88221	88697	.	-	.	ID=gene-J4731_17175;Name=J4731_17175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_17175
JAGETS010000034.1	Protein Homology	CDS	88221	88697	.	-	0	ID=cds-MBO1929439.1;Parent=gene-J4731_17175;Dbxref=NCBI_GP:MBO1929439.1;Name=MBO1929439.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF026971.1;locus_tag=J4731_17175;product=hypothetical protein;protein_id=MBO1929439.1;transl_table=11
JAGETS010000034.1	Genbank	gene	88782	89015	.	-	.	ID=gene-J4731_17180;Name=J4731_17180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_17180
JAGETS010000034.1	GeneMarkS-2+	CDS	88782	89015	.	-	0	ID=cds-MBO1929440.1;Parent=gene-J4731_17180;Dbxref=NCBI_GP:MBO1929440.1;Name=MBO1929440.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_17180;product=hypothetical protein;protein_id=MBO1929440.1;transl_table=11
JAGETS010000034.1	Genbank	pseudogene	89233	89665	.	-	.	ID=gene-J4731_17185;Name=J4731_17185;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_17185;pseudo=true
JAGETS010000034.1	Protein Homology	CDS	89233	89665	.	-	0	ID=cds-J4731_17185;Parent=gene-J4731_17185;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001362402.1;locus_tag=J4731_17185;product=DUF4150 domain-containing protein;pseudo=true;transl_table=11
JAGETS010000034.1	Genbank	pseudogene	89666	90663	.	-	.	ID=gene-J4731_17190;Name=J4731_17190;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_17190;pseudo=true
JAGETS010000034.1	Protein Homology	CDS	89666	90663	.	-	0	ID=cds-J4731_17190;Parent=gene-J4731_17190;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004244632.1;locus_tag=J4731_17190;product=3-oxoacyl-ACP synthase;pseudo=true;transl_table=11
JAGETS010000034.1	Genbank	pseudogene	90667	91704	.	-	.	ID=gene-J4731_17195;Name=J4731_17195;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_17195;pseudo=true
JAGETS010000034.1	Protein Homology	CDS	90667	91704	.	-	0	ID=cds-J4731_17195;Parent=gene-J4731_17195;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017827653.1;locus_tag=J4731_17195;product=DUF2169 domain-containing protein;pseudo=true;transl_table=11
JAGETS010000034.1	Genbank	pseudogene	91718	92247	.	-	.	ID=gene-J4731_17200;Name=J4731_17200;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_17200;pseudo=true
JAGETS010000034.1	Protein Homology	CDS	91718	92247	.	-	0	ID=cds-J4731_17200;Parent=gene-J4731_17200;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004244630.1;locus_tag=J4731_17200;product=hypothetical protein;pseudo=true;transl_table=11
JAGETS010000034.1	Genbank	gene	92250	92495	.	-	.	ID=gene-J4731_17205;Name=J4731_17205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_17205
JAGETS010000034.1	GeneMarkS-2+	CDS	92250	92495	.	-	0	ID=cds-MBO1929441.1;Parent=gene-J4731_17205;Dbxref=NCBI_GP:MBO1929441.1;Name=MBO1929441.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_17205;product=hypothetical protein;protein_id=MBO1929441.1;transl_table=11
JAGETS010000034.1	Genbank	pseudogene	92533	94062	.	-	.	ID=gene-J4731_17210;Name=tssI;gbkey=Gene;gene=tssI;gene_biotype=pseudogene;locus_tag=J4731_17210;pseudo=true
JAGETS010000034.1	Protein Homology	CDS	92533	94062	.	-	0	ID=cds-J4731_17210;Parent=gene-J4731_17210;Note=frameshifted;gbkey=CDS;gene=tssI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004250010.1;locus_tag=J4731_17210;product=type VI secretion system tip protein VgrG;pseudo=true;transl_table=11
JAGETS010000034.1	Genbank	gene	94275	94484	.	-	.	ID=gene-J4731_17215;Name=J4731_17215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_17215
JAGETS010000034.1	GeneMarkS-2+	CDS	94275	94484	.	-	0	ID=cds-MBO1929442.1;Parent=gene-J4731_17215;Dbxref=NCBI_GP:MBO1929442.1;Name=MBO1929442.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_17215;product=hypothetical protein;protein_id=MBO1929442.1;transl_table=11
JAGETS010000034.1	Genbank	pseudogene	94491	94996	.	-	.	ID=gene-J4731_17220;Name=J4731_17220;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_17220;pseudo=true
JAGETS010000034.1	Protein Homology	CDS	94491	94996	.	-	0	ID=cds-J4731_17220;Parent=gene-J4731_17220;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308261.1;locus_tag=J4731_17220;product=Hcp family type VI secretion system effector;pseudo=true;transl_table=11
JAGETS010000034.1	Genbank	gene	96130	96351	.	+	.	ID=gene-J4731_17225;Name=J4731_17225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_17225
JAGETS010000034.1	GeneMarkS-2+	CDS	96130	96351	.	+	0	ID=cds-MBO1929443.1;Parent=gene-J4731_17225;Dbxref=NCBI_GP:MBO1929443.1;Name=MBO1929443.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_17225;product=hypothetical protein;protein_id=MBO1929443.1;transl_table=11
JAGETS010000034.1	Genbank	pseudogene	96677	98192	.	-	.	ID=gene-J4731_17230;Name=J4731_17230;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_17230;pseudo=true
JAGETS010000034.1	Protein Homology	CDS	96677	98192	.	-	0	ID=cds-J4731_17230;Parent=gene-J4731_17230;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012088182.1;locus_tag=J4731_17230;product=IS66 family transposase;pseudo=true;transl_table=11
JAGETS010000034.1	Genbank	gene	98276	98575	.	-	.	ID=gene-J4731_17235;Name=tnpB;gbkey=Gene;gene=tnpB;gene_biotype=protein_coding;locus_tag=J4731_17235
JAGETS010000034.1	Protein Homology	CDS	98276	98575	.	-	0	ID=cds-MBO1929444.1;Parent=gene-J4731_17235;Dbxref=NCBI_GP:MBO1929444.1;Name=MBO1929444.1;gbkey=CDS;gene=tnpB;inference=COORDINATES: protein motif:HMM:NF017528.1;locus_tag=J4731_17235;product=IS66 family insertion sequence element accessory protein TnpB;protein_id=MBO1929444.1;transl_table=11
JAGETS010000034.1	Genbank	gene	98615	98911	.	-	.	ID=gene-J4731_17240;Name=J4731_17240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_17240
JAGETS010000034.1	Protein Homology	CDS	98615	98911	.	-	0	ID=cds-MBO1929445.1;Parent=gene-J4731_17240;Dbxref=NCBI_GP:MBO1929445.1;Name=MBO1929445.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013785984.1;locus_tag=J4731_17240;product=IS66 family insertion sequence hypothetical protein;protein_id=MBO1929445.1;transl_table=11
JAGETS010000034.1	Genbank	gene	99507	99881	.	-	.	ID=gene-J4731_17245;Name=J4731_17245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_17245
JAGETS010000034.1	Protein Homology	CDS	99507	99881	.	-	0	ID=cds-MBO1929446.1;Parent=gene-J4731_17245;Dbxref=NCBI_GP:MBO1929446.1;Name=MBO1929446.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004256055.1;locus_tag=J4731_17245;product=CrcB family protein;protein_id=MBO1929446.1;transl_table=11
JAGETS010000034.1	Genbank	pseudogene	99894	100271	.	-	.	ID=gene-J4731_17250;Name=J4731_17250;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_17250;pseudo=true
JAGETS010000034.1	Protein Homology	CDS	99894	100271	.	-	0	ID=cds-J4731_17250;Parent=gene-J4731_17250;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004256057.1;locus_tag=J4731_17250;product=CrcB family protein;pseudo=true;transl_table=11
JAGETS010000034.1	Genbank	pseudogene	100417	100986	.	-	.	ID=gene-J4731_17255;Name=J4731_17255;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_17255;pseudo=true
JAGETS010000034.1	Protein Homology	CDS	100417	100986	.	-	0	ID=cds-J4731_17255;Parent=gene-J4731_17255;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004703224.1;locus_tag=J4731_17255;product=ATP-binding cassette domain-containing protein;pseudo=true;transl_table=11
JAGETS010000034.1	Genbank	pseudogene	101026	102186	.	-	.	ID=gene-J4731_17260;Name=J4731_17260;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_17260;pseudo=true
JAGETS010000034.1	Protein Homology	CDS	101026	102186	.	-	0	ID=cds-J4731_17260;Parent=gene-J4731_17260;Note=frameshifted%3B incomplete%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004256059.1;locus_tag=J4731_17260;product=transporter;pseudo=true;transl_table=11
##sequence-region JAGETS010000035.1 1 5076
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=587
JAGETS010000035.1	Genbank	region	1	5076	.	+	.	ID=JAGETS010000035.1:1..5076;Dbxref=taxon:587;collected-by=NHLS;collection-date=2018;country=South Africa: Pretoria;gbkey=Src;isolation-source=stool;lat-lon=25.7479 S 28.2293 E;mol_type=genomic DNA;nat-host=porcine;strain=SG003
JAGETS010000035.1	Genbank	pseudogene	39	1548	.	-	.	ID=gene-J4731_17265;Name=J4731_17265;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_17265;pseudo=true
JAGETS010000035.1	Protein Homology	CDS	39	1548	.	-	0	ID=cds-J4731_17265;Parent=gene-J4731_17265;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012088182.1;locus_tag=J4731_17265;product=IS66 family transposase;pseudo=true;transl_table=11
JAGETS010000035.1	Genbank	gene	1682	1930	.	-	.	ID=gene-J4731_17270;Name=tnpB;gbkey=Gene;gene=tnpB;gene_biotype=protein_coding;locus_tag=J4731_17270
JAGETS010000035.1	Protein Homology	CDS	1682	1930	.	-	0	ID=cds-MBO1929447.1;Parent=gene-J4731_17270;Dbxref=NCBI_GP:MBO1929447.1;Name=MBO1929447.1;gbkey=CDS;gene=tnpB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013360139.1;locus_tag=J4731_17270;product=IS66 family insertion sequence element accessory protein TnpB;protein_id=MBO1929447.1;transl_table=11
JAGETS010000035.1	Genbank	gene	1971	2267	.	-	.	ID=gene-J4731_17275;Name=J4731_17275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_17275
JAGETS010000035.1	Protein Homology	CDS	1971	2267	.	-	0	ID=cds-MBO1929448.1;Parent=gene-J4731_17275;Dbxref=NCBI_GP:MBO1929448.1;Name=MBO1929448.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013785984.1;locus_tag=J4731_17275;product=IS66 family insertion sequence hypothetical protein;protein_id=MBO1929448.1;transl_table=11
JAGETS010000035.1	Genbank	gene	2871	3248	.	-	.	ID=gene-J4731_17280;Name=J4731_17280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_17280
JAGETS010000035.1	Protein Homology	CDS	2871	3248	.	-	0	ID=cds-MBO1929449.1;Parent=gene-J4731_17280;Dbxref=NCBI_GP:MBO1929449.1;Name=MBO1929449.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004256055.1;locus_tag=J4731_17280;product=CrcB family protein;protein_id=MBO1929449.1;transl_table=11
JAGETS010000035.1	Genbank	pseudogene	3261	3640	.	-	.	ID=gene-J4731_17285;Name=crcB;gbkey=Gene;gene=crcB;gene_biotype=pseudogene;locus_tag=J4731_17285;pseudo=true
JAGETS010000035.1	Protein Homology	CDS	3261	3640	.	-	0	ID=cds-J4731_17285;Parent=gene-J4731_17285;Note=frameshifted;gbkey=CDS;gene=crcB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004256057.1;locus_tag=J4731_17285;product=fluoride efflux transporter CrcB;pseudo=true;transl_table=11
JAGETS010000035.1	Genbank	gene	3790	4386	.	-	.	ID=gene-J4731_17290;Name=J4731_17290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_17290
JAGETS010000035.1	Protein Homology	CDS	3790	4386	.	-	0	ID=cds-MBO1929450.1;Parent=gene-J4731_17290;Dbxref=NCBI_GP:MBO1929450.1;Name=MBO1929450.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004256058.1;locus_tag=J4731_17290;product=ATP-binding cassette domain-containing protein;protein_id=MBO1929450.1;transl_table=11
JAGETS010000035.1	Genbank	gene	4405	4842	.	-	.	ID=gene-J4731_17295;Name=J4731_17295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_17295
JAGETS010000035.1	GeneMarkS-2+	CDS	4405	4842	.	-	0	ID=cds-MBO1929451.1;Parent=gene-J4731_17295;Dbxref=NCBI_GP:MBO1929451.1;Name=MBO1929451.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_17295;product=hypothetical protein;protein_id=MBO1929451.1;transl_table=11
##sequence-region JAGETS010000036.1 1 13336
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=587
JAGETS010000036.1	Genbank	region	1	13336	.	+	.	ID=JAGETS010000036.1:1..13336;Dbxref=taxon:587;collected-by=NHLS;collection-date=2018;country=South Africa: Pretoria;gbkey=Src;isolation-source=stool;lat-lon=25.7479 S 28.2293 E;mol_type=genomic DNA;nat-host=porcine;strain=SG003
JAGETS010000036.1	Genbank	pseudogene	1	1025	.	-	.	ID=gene-J4731_17300;Name=J4731_17300;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_17300;pseudo=true
JAGETS010000036.1	Protein Homology	CDS	1	1025	.	-	0	ID=cds-J4731_17300;Parent=gene-J4731_17300;Note=frameshifted%3B incomplete%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001567860.1;locus_tag=J4731_17300;product=integrase family protein;pseudo=true;transl_table=11
JAGETS010000036.1	Genbank	pseudogene	1080	2535	.	-	.	ID=gene-J4731_17305;Name=J4731_17305;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_17305;pseudo=true
JAGETS010000036.1	Protein Homology	CDS	1080	2535	.	-	0	ID=cds-J4731_17305;Parent=gene-J4731_17305;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020196412.1;locus_tag=J4731_17305;product=site-specific integrase;pseudo=true;transl_table=11
JAGETS010000036.1	Genbank	pseudogene	2702	3898	.	-	.	ID=gene-J4731_17310;Name=rho;gbkey=Gene;gene=rho;gene_biotype=pseudogene;locus_tag=J4731_17310;pseudo=true
JAGETS010000036.1	Protein Homology	CDS	2702	3898	.	-	0	ID=cds-J4731_17310;Parent=gene-J4731_17310;Note=frameshifted;gbkey=CDS;gene=rho;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017492510.1;locus_tag=J4731_17310;product=transcription termination factor Rho;pseudo=true;transl_table=11
JAGETS010000036.1	Genbank	pseudogene	4659	4972	.	-	.	ID=gene-J4731_17315;Name=trxA;gbkey=Gene;gene=trxA;gene_biotype=pseudogene;locus_tag=J4731_17315;pseudo=true
JAGETS010000036.1	Protein Homology	CDS	4659	4972	.	-	0	ID=cds-J4731_17315;Parent=gene-J4731_17315;Note=frameshifted;gbkey=CDS;gene=trxA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017375425.1;locus_tag=J4731_17315;product=thioredoxin TrxA;pseudo=true;transl_table=11
JAGETS010000036.1	Genbank	pseudogene	5088	5861	.	+	.	ID=gene-J4731_17320;Name=J4731_17320;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_17320;pseudo=true
JAGETS010000036.1	Protein Homology	CDS	5088	5861	.	+	0	ID=cds-J4731_17320;Parent=gene-J4731_17320;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001639373.1;locus_tag=J4731_17320;product=DEAD/DEAH box helicase;pseudo=true;transl_table=11
JAGETS010000036.1	Genbank	pseudogene	5949	6195	.	+	.	ID=gene-J4731_17325;Name=J4731_17325;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_17325;pseudo=true
JAGETS010000036.1	Protein Homology	CDS	5949	6195	.	+	0	ID=cds-J4731_17325;Parent=gene-J4731_17325;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010989717.1;locus_tag=J4731_17325;product=hypothetical protein;pseudo=true;transl_table=11
JAGETS010000036.1	Genbank	pseudogene	6379	7795	.	+	.	ID=gene-J4731_17330;Name=gppA;gbkey=Gene;gene=gppA;gene_biotype=pseudogene;locus_tag=J4731_17330;pseudo=true
JAGETS010000036.1	Protein Homology	CDS	6379	7795	.	+	0	ID=cds-J4731_17330;Parent=gene-J4731_17330;Note=frameshifted%3B internal stop;gbkey=CDS;gene=gppA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004146511.1;locus_tag=J4731_17330;product=guanosine-5'-triphosphate%2C3'-diphosphate diphosphatase;pseudo=true;transl_table=11
JAGETS010000036.1	Genbank	pseudogene	7869	9833	.	-	.	ID=gene-J4731_17335;Name=J4731_17335;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_17335;pseudo=true
JAGETS010000036.1	Protein Homology	CDS	7869	9833	.	-	0	ID=cds-J4731_17335;Parent=gene-J4731_17335;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019452566.1;locus_tag=J4731_17335;product=UvrD-helicase domain-containing protein;pseudo=true;transl_table=11
JAGETS010000036.1	Genbank	pseudogene	10155	11062	.	-	.	ID=gene-J4731_17340;Name=J4731_17340;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_17340;pseudo=true
JAGETS010000036.1	Protein Homology	CDS	10155	11062	.	-	0	ID=cds-J4731_17340;Parent=gene-J4731_17340;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001508111.1;locus_tag=J4731_17340;product=hypothetical protein;pseudo=true;transl_table=11
JAGETS010000036.1	Genbank	pseudogene	11075	11506	.	-	.	ID=gene-J4731_17345;Name=J4731_17345;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_17345;pseudo=true
JAGETS010000036.1	Protein Homology	CDS	11075	11506	.	-	0	ID=cds-J4731_17345;Parent=gene-J4731_17345;Note=catalyzes the formation of (R)-2%2C3-dihydroxy-3-methylbutanoate from (S)-2-hydroxy-2-methyl-3-oxobutanoate in valine and isoleucine biosynthesis%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019603.1;locus_tag=J4731_17345;product=ketol-acid reductoisomerase;pseudo=true;transl_table=11
JAGETS010000036.1	Genbank	gene	11473	11628	.	-	.	ID=gene-J4731_17350;Name=J4731_17350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_17350
JAGETS010000036.1	GeneMarkS-2+	CDS	11473	11628	.	-	0	ID=cds-MBO1929452.1;Parent=gene-J4731_17350;Dbxref=NCBI_GP:MBO1929452.1;Name=MBO1929452.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_17350;product=hypothetical protein;protein_id=MBO1929452.1;transl_table=11
JAGETS010000036.1	Genbank	pseudogene	11867	12687	.	+	.	ID=gene-J4731_17355;Name=ilvY;gbkey=Gene;gene=ilvY;gene_biotype=pseudogene;locus_tag=J4731_17355;pseudo=true
JAGETS010000036.1	Protein Homology	CDS	11867	12687	.	+	0	ID=cds-J4731_17355;Parent=gene-J4731_17355;Note=frameshifted;gbkey=CDS;gene=ilvY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006814625.1;locus_tag=J4731_17355;product=HTH-type transcriptional activator IlvY;pseudo=true;transl_table=11
JAGETS010000036.1	Genbank	pseudogene	12711	13336	.	-	.	ID=gene-J4731_17360;Name=J4731_17360;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_17360;pseudo=true
JAGETS010000036.1	Protein Homology	CDS	12711	13336	.	-	0	ID=cds-J4731_17360;Parent=gene-J4731_17360;Note=threonine deaminase%3B threonine dehydratase%3B in Escherichia coli%2C IlvA is part of the isoleucine biosynthetic pathway%3B frameshifted%3B incomplete%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012147430.1;locus_tag=J4731_17360;product=threonine ammonia-lyase%2C biosynthetic;pseudo=true;transl_table=11
##sequence-region JAGETS010000037.1 1 60718
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=587
JAGETS010000037.1	Genbank	region	1	60718	.	+	.	ID=JAGETS010000037.1:1..60718;Dbxref=taxon:587;collected-by=NHLS;collection-date=2018;country=South Africa: Pretoria;gbkey=Src;isolation-source=stool;lat-lon=25.7479 S 28.2293 E;mol_type=genomic DNA;nat-host=porcine;strain=SG003
JAGETS010000037.1	Genbank	pseudogene	378	1309	.	-	.	ID=gene-J4731_17365;Name=znuA;gbkey=Gene;gene=znuA;gene_biotype=pseudogene;locus_tag=J4731_17365;pseudo=true
JAGETS010000037.1	Protein Homology	CDS	378	1309	.	-	0	ID=cds-J4731_17365;Parent=gene-J4731_17365;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;gene=znuA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004919466.1;locus_tag=J4731_17365;product=zinc ABC transporter substrate-binding protein ZnuA;pseudo=true;transl_table=11
JAGETS010000037.1	Genbank	pseudogene	1382	2127	.	+	.	ID=gene-J4731_17370;Name=znuC;gbkey=Gene;gene=znuC;gene_biotype=pseudogene;locus_tag=J4731_17370;pseudo=true
JAGETS010000037.1	Protein Homology	CDS	1382	2127	.	+	0	ID=cds-J4731_17370;Parent=gene-J4731_17370;Note=frameshifted;gbkey=CDS;gene=znuC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004919464.1;locus_tag=J4731_17370;product=zinc ABC transporter ATP-binding protein ZnuC;pseudo=true;transl_table=11
JAGETS010000037.1	Genbank	pseudogene	2120	2853	.	+	.	ID=gene-J4731_17375;Name=znuB;gbkey=Gene;gene=znuB;gene_biotype=pseudogene;locus_tag=J4731_17375;pseudo=true
JAGETS010000037.1	Protein Homology	CDS	2120	2853	.	+	0	ID=cds-J4731_17375;Parent=gene-J4731_17375;Note=frameshifted;gbkey=CDS;gene=znuB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003833831.1;locus_tag=J4731_17375;product=zinc ABC transporter permease subunit ZnuB;pseudo=true;transl_table=11
JAGETS010000037.1	Genbank	pseudogene	2984	3964	.	-	.	ID=gene-J4731_17380;Name=ruvB;gbkey=Gene;gene=ruvB;gene_biotype=pseudogene;locus_tag=J4731_17380;pseudo=true
JAGETS010000037.1	Protein Homology	CDS	2984	3964	.	-	0	ID=cds-J4731_17380;Parent=gene-J4731_17380;Note=frameshifted%3B internal stop;gbkey=CDS;gene=ruvB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016536952.1;locus_tag=J4731_17380;product=Holliday junction branch migration DNA helicase RuvB;pseudo=true;transl_table=11
JAGETS010000037.1	Genbank	pseudogene	3979	4591	.	-	.	ID=gene-J4731_17385;Name=ruvA;gbkey=Gene;gene=ruvA;gene_biotype=pseudogene;locus_tag=J4731_17385;pseudo=true
JAGETS010000037.1	Protein Homology	CDS	3979	4591	.	-	0	ID=cds-J4731_17385;Parent=gene-J4731_17385;Note=frameshifted;gbkey=CDS;gene=ruvA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012131997.1;locus_tag=J4731_17385;product=Holliday junction branch migration protein RuvA;pseudo=true;transl_table=11
JAGETS010000037.1	Genbank	pseudogene	4779	5267	.	-	.	ID=gene-J4731_17390;Name=ruvC;gbkey=Gene;gene=ruvC;gene_biotype=pseudogene;locus_tag=J4731_17390;pseudo=true
JAGETS010000037.1	Protein Homology	CDS	4779	5267	.	-	0	ID=cds-J4731_17390;Parent=gene-J4731_17390;Note=frameshifted;gbkey=CDS;gene=ruvC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016941245.1;locus_tag=J4731_17390;product=crossover junction endodeoxyribonuclease RuvC;pseudo=true;transl_table=11
JAGETS010000037.1	Genbank	pseudogene	5532	6274	.	-	.	ID=gene-J4731_17395;Name=J4731_17395;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_17395;pseudo=true
JAGETS010000037.1	Protein Homology	CDS	5532	6274	.	-	0	ID=cds-J4731_17395;Parent=gene-J4731_17395;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227699.1;locus_tag=J4731_17395;product=YebC/PmpR family DNA-binding transcriptional regulator;pseudo=true;transl_table=11
JAGETS010000037.1	Genbank	pseudogene	6304	6756	.	-	.	ID=gene-J4731_17400;Name=nudB;gbkey=Gene;gene=nudB;gene_biotype=pseudogene;locus_tag=J4731_17400;pseudo=true
JAGETS010000037.1	Protein Homology	CDS	6304	6756	.	-	0	ID=cds-J4731_17400;Parent=gene-J4731_17400;Note=frameshifted;gbkey=CDS;gene=nudB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004919447.1;locus_tag=J4731_17400;product=dihydroneopterin triphosphate diphosphatase;pseudo=true;transl_table=11
JAGETS010000037.1	Genbank	pseudogene	6737	8487	.	-	.	ID=gene-J4731_17405;Name=aspS;gbkey=Gene;gene=aspS;gene_biotype=pseudogene;locus_tag=J4731_17405;pseudo=true
JAGETS010000037.1	Protein Homology	CDS	6737	8487	.	-	0	ID=cds-J4731_17405;Parent=gene-J4731_17405;Note=frameshifted%3B internal stop;gbkey=CDS;gene=aspS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227701.1;locus_tag=J4731_17405;product=aspartate--tRNA ligase;pseudo=true;transl_table=11
JAGETS010000037.1	Genbank	pseudogene	9021	9315	.	+	.	ID=gene-J4731_17410;Name=J4731_17410;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_17410;pseudo=true
JAGETS010000037.1	Protein Homology	CDS	9021	9315	.	+	0	ID=cds-J4731_17410;Parent=gene-J4731_17410;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014658289.1;locus_tag=J4731_17410;product=DUF4377 domain-containing protein;pseudo=true;transl_table=11
JAGETS010000037.1	Genbank	pseudogene	9423	9817	.	+	.	ID=gene-J4731_17415;Name=J4731_17415;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_17415;pseudo=true
JAGETS010000037.1	Protein Homology	CDS	9423	9817	.	+	0	ID=cds-J4731_17415;Parent=gene-J4731_17415;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008911344.1;locus_tag=J4731_17415;product=NUDIX domain-containing protein;pseudo=true;transl_table=11
JAGETS010000037.1	Genbank	pseudogene	9972	10355	.	+	.	ID=gene-J4731_17420;Name=J4731_17420;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_17420;pseudo=true
JAGETS010000037.1	Protein Homology	CDS	9972	10355	.	+	0	ID=cds-J4731_17420;Parent=gene-J4731_17420;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012848286.1;locus_tag=J4731_17420;product=MAPEG family protein;pseudo=true;transl_table=11
JAGETS010000037.1	Genbank	pseudogene	10504	11216	.	+	.	ID=gene-J4731_17425;Name=cmoA;gbkey=Gene;gene=cmoA;gene_biotype=pseudogene;locus_tag=J4731_17425;pseudo=true
JAGETS010000037.1	Protein Homology	CDS	10504	11216	.	+	0	ID=cds-J4731_17425;Parent=gene-J4731_17425;Note=frameshifted%3B internal stop;gbkey=CDS;gene=cmoA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008911346.1;locus_tag=J4731_17425;product=carboxy-S-adenosyl-L-methionine synthase CmoA;pseudo=true;transl_table=11
JAGETS010000037.1	Genbank	pseudogene	11219	12107	.	+	.	ID=gene-J4731_17430;Name=cmoB;gbkey=Gene;gene=cmoB;gene_biotype=pseudogene;locus_tag=J4731_17430;pseudo=true
JAGETS010000037.1	Protein Homology	CDS	11219	12107	.	+	0	ID=cds-J4731_17430;Parent=gene-J4731_17430;Note=frameshifted%3B internal stop;gbkey=CDS;gene=cmoB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000569028.1;locus_tag=J4731_17430;product=tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB;pseudo=true;transl_table=11
JAGETS010000037.1	Genbank	pseudogene	12221	12984	.	-	.	ID=gene-J4731_17435;Name=J4731_17435;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_17435;pseudo=true
JAGETS010000037.1	Protein Homology	CDS	12221	12984	.	-	0	ID=cds-J4731_17435;Parent=gene-J4731_17435;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006533261.1;locus_tag=J4731_17435;product=dimethyl sulfoxide reductase anchor subunit;pseudo=true;transl_table=11
JAGETS010000037.1	Genbank	pseudogene	12986	13587	.	-	.	ID=gene-J4731_17440;Name=dmsB;gbkey=Gene;gene=dmsB;gene_biotype=pseudogene;locus_tag=J4731_17440;pseudo=true
JAGETS010000037.1	Protein Homology	CDS	12986	13587	.	-	0	ID=cds-J4731_17440;Parent=gene-J4731_17440;Note=frameshifted;gbkey=CDS;gene=dmsB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014656207.1;locus_tag=J4731_17440;product=dimethylsulfoxide reductase subunit B;pseudo=true;transl_table=11
JAGETS010000037.1	Genbank	pseudogene	13599	15989	.	-	.	ID=gene-J4731_17445;Name=J4731_17445;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_17445;pseudo=true
JAGETS010000037.1	Protein Homology	CDS	13599	15989	.	-	0	ID=cds-J4731_17445;Parent=gene-J4731_17445;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011055417.1;locus_tag=J4731_17445;product=molybdopterin-dependent oxidoreductase;pseudo=true;transl_table=11
JAGETS010000037.1	Genbank	pseudogene	16308	17065	.	-	.	ID=gene-J4731_17450;Name=cutC;gbkey=Gene;gene=cutC;gene_biotype=pseudogene;locus_tag=J4731_17450;pseudo=true
JAGETS010000037.1	Protein Homology	CDS	16308	17065	.	-	0	ID=cds-J4731_17450;Parent=gene-J4731_17450;Note=frameshifted;gbkey=CDS;gene=cutC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004242710.1;locus_tag=J4731_17450;product=copper homeostasis protein CutC;pseudo=true;transl_table=11
JAGETS010000037.1	Genbank	pseudogene	17261	17793	.	-	.	ID=gene-J4731_17455;Name=J4731_17455;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_17455;pseudo=true
JAGETS010000037.1	Protein Homology	CDS	17261	17793	.	-	0	ID=cds-J4731_17455;Parent=gene-J4731_17455;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006661845.1;locus_tag=J4731_17455;product=VOC family protein;pseudo=true;transl_table=11
JAGETS010000037.1	Genbank	pseudogene	17957	19682	.	+	.	ID=gene-J4731_17460;Name=argS;gbkey=Gene;gene=argS;gene_biotype=pseudogene;locus_tag=J4731_17460;pseudo=true
JAGETS010000037.1	Protein Homology	CDS	17957	19682	.	+	0	ID=cds-J4731_17460;Parent=gene-J4731_17460;Note=frameshifted;gbkey=CDS;gene=argS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001025321.1;locus_tag=J4731_17460;product=arginine--tRNA ligase;pseudo=true;transl_table=11
JAGETS010000037.1	Genbank	pseudogene	19712	20278	.	-	.	ID=gene-J4731_17465;Name=J4731_17465;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_17465;pseudo=true
JAGETS010000037.1	Protein Homology	CDS	19712	20278	.	-	0	ID=cds-J4731_17465;Parent=gene-J4731_17465;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001240351.1;locus_tag=J4731_17465;product=DNA-binding protein;pseudo=true;transl_table=11
JAGETS010000037.1	Genbank	pseudogene	20327	20577	.	-	.	ID=gene-J4731_17470;Name=J4731_17470;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_17470;pseudo=true
JAGETS010000037.1	Protein Homology	CDS	20327	20577	.	-	0	ID=cds-J4731_17470;Parent=gene-J4731_17470;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004255083.1;locus_tag=J4731_17470;product=hypothetical protein;pseudo=true;transl_table=11
JAGETS010000037.1	Genbank	pseudogene	20892	22408	.	-	.	ID=gene-J4731_17475;Name=murJ;gbkey=Gene;gene=murJ;gene_biotype=pseudogene;locus_tag=J4731_17475;pseudo=true
JAGETS010000037.1	Protein Homology	CDS	20892	22408	.	-	0	ID=cds-J4731_17475;Parent=gene-J4731_17475;Note=frameshifted%3B internal stop;gbkey=CDS;gene=murJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007866771.1;locus_tag=J4731_17475;product=murein biosynthesis integral membrane protein MurJ;pseudo=true;transl_table=11
JAGETS010000037.1	Genbank	pseudogene	22501	23065	.	-	.	ID=gene-J4731_17480;Name=rimJ;gbkey=Gene;gene=rimJ;gene_biotype=pseudogene;locus_tag=J4731_17480;pseudo=true
JAGETS010000037.1	Protein Homology	CDS	22501	23065	.	-	0	ID=cds-J4731_17480;Parent=gene-J4731_17480;Note=frameshifted;gbkey=CDS;gene=rimJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009635441.1;locus_tag=J4731_17480;product=ribosomal protein S5-alanine N-acetyltransferase;pseudo=true;transl_table=11
JAGETS010000037.1	Genbank	pseudogene	23631	24805	.	+	.	ID=gene-J4731_17485;Name=mdtH;gbkey=Gene;gene=mdtH;gene_biotype=pseudogene;locus_tag=J4731_17485;pseudo=true
JAGETS010000037.1	Protein Homology	CDS	23631	24805	.	+	0	ID=cds-J4731_17485;Parent=gene-J4731_17485;Note=frameshifted;gbkey=CDS;gene=mdtH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211217.1;locus_tag=J4731_17485;product=multidrug efflux MFS transporter MdtH;pseudo=true;transl_table=11
JAGETS010000037.1	Genbank	pseudogene	24869	25418	.	+	.	ID=gene-J4731_17490;Name=J4731_17490;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_17490;pseudo=true
JAGETS010000037.1	Protein Homology	CDS	24869	25418	.	+	0	ID=cds-J4731_17490;Parent=gene-J4731_17490;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006659967.1;locus_tag=J4731_17490;product=lipoprotein;pseudo=true;transl_table=11
JAGETS010000037.1	Genbank	pseudogene	25567	26115	.	-	.	ID=gene-J4731_17495;Name=J4731_17495;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_17495;pseudo=true
JAGETS010000037.1	Protein Homology	CDS	25567	26115	.	-	0	ID=cds-J4731_17495;Parent=gene-J4731_17495;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001001921.1;locus_tag=J4731_17495;product=molecular chaperone TorD family protein;pseudo=true;transl_table=11
JAGETS010000037.1	Genbank	pseudogene	26252	27189	.	-	.	ID=gene-J4731_17500;Name=ghrA;gbkey=Gene;gene=ghrA;gene_biotype=pseudogene;locus_tag=J4731_17500;pseudo=true
JAGETS010000037.1	Protein Homology	CDS	26252	27189	.	-	0	ID=cds-J4731_17500;Parent=gene-J4731_17500;Note=frameshifted%3B internal stop;gbkey=CDS;gene=ghrA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011146341.1;locus_tag=J4731_17500;product=glyoxylate/hydroxypyruvate reductase GhrA;pseudo=true;transl_table=11
JAGETS010000037.1	Genbank	gene	27519	27606	.	+	.	ID=gene-J4731_17505;Name=J4731_17505;gbkey=Gene;gene_biotype=tRNA;locus_tag=J4731_17505
JAGETS010000037.1	tRNAscan-SE	tRNA	27519	27606	.	+	.	ID=rna-J4731_17505;Parent=gene-J4731_17505;anticodon=(pos:27553..27555);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=J4731_17505;product=tRNA-Ser
JAGETS010000037.1	tRNAscan-SE	exon	27519	27606	.	+	.	ID=exon-J4731_17505-1;Parent=rna-J4731_17505;anticodon=(pos:27553..27555);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=J4731_17505;product=tRNA-Ser
JAGETS010000037.1	Genbank	pseudogene	27670	29129	.	-	.	ID=gene-J4731_17510;Name=J4731_17510;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_17510;pseudo=true
JAGETS010000037.1	Protein Homology	CDS	27670	29129	.	-	0	ID=cds-J4731_17510;Parent=gene-J4731_17510;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006659972.1;locus_tag=J4731_17510;product=alanine:cation symporter family protein;pseudo=true;transl_table=11
JAGETS010000037.1	Genbank	pseudogene	29216	30692	.	-	.	ID=gene-J4731_17515;Name=J4731_17515;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_17515;pseudo=true
JAGETS010000037.1	Protein Homology	CDS	29216	30692	.	-	0	ID=cds-J4731_17515;Parent=gene-J4731_17515;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004255110.1;locus_tag=J4731_17515;product=aldehyde dehydrogenase;pseudo=true;transl_table=11
JAGETS010000037.1	Genbank	pseudogene	30701	31564	.	-	.	ID=gene-J4731_17520;Name=dapA;gbkey=Gene;gene=dapA;gene_biotype=pseudogene;locus_tag=J4731_17520;pseudo=true
JAGETS010000037.1	Protein Homology	CDS	30701	31564	.	-	0	ID=cds-J4731_17520;Parent=gene-J4731_17520;Note=frameshifted;gbkey=CDS;gene=dapA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004255111.1;locus_tag=J4731_17520;product=4-hydroxy-tetrahydrodipicolinate synthase;pseudo=true;transl_table=11
JAGETS010000037.1	Genbank	pseudogene	31582	32823	.	-	.	ID=gene-J4731_17525;Name=J4731_17525;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_17525;pseudo=true
JAGETS010000037.1	Protein Homology	CDS	31582	32823	.	-	0	ID=cds-J4731_17525;Parent=gene-J4731_17525;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006661853.1;locus_tag=J4731_17525;product=FAD-binding oxidoreductase;pseudo=true;transl_table=11
JAGETS010000037.1	Genbank	pseudogene	32832	33777	.	-	.	ID=gene-J4731_17530;Name=J4731_17530;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_17530;pseudo=true
JAGETS010000037.1	Protein Homology	CDS	32832	33777	.	-	0	ID=cds-J4731_17530;Parent=gene-J4731_17530;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014658280.1;locus_tag=J4731_17530;product=proline racemase family protein;pseudo=true;transl_table=11
JAGETS010000037.1	Genbank	pseudogene	33931	34724	.	+	.	ID=gene-J4731_17535;Name=J4731_17535;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_17535;pseudo=true
JAGETS010000037.1	Protein Homology	CDS	33931	34724	.	+	0	ID=cds-J4731_17535;Parent=gene-J4731_17535;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004255117.1;locus_tag=J4731_17535;product=helix-turn-helix domain-containing protein;pseudo=true;transl_table=11
JAGETS010000037.1	Genbank	pseudogene	34962	35584	.	+	.	ID=gene-J4731_17540;Name=J4731_17540;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_17540;pseudo=true
JAGETS010000037.1	Protein Homology	CDS	34962	35584	.	+	0	ID=cds-J4731_17540;Parent=gene-J4731_17540;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006661856.1;locus_tag=J4731_17540;product=CDP-alcohol phosphatidyltransferase family protein;pseudo=true;transl_table=11
JAGETS010000037.1	Genbank	pseudogene	35594	37345	.	+	.	ID=gene-J4731_17545;Name=J4731_17545;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_17545;pseudo=true
JAGETS010000037.1	Protein Homology	CDS	35594	37345	.	+	0	ID=cds-J4731_17545;Parent=gene-J4731_17545;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004239926.1;locus_tag=J4731_17545;product=bifunctional alpha/beta hydrolase/class I SAM-dependent methyltransferase;pseudo=true;transl_table=11
JAGETS010000037.1	Genbank	pseudogene	37526	38197	.	+	.	ID=gene-J4731_17550;Name=J4731_17550;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_17550;pseudo=true
JAGETS010000037.1	Protein Homology	CDS	37526	38197	.	+	0	ID=cds-J4731_17550;Parent=gene-J4731_17550;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008812692.1;locus_tag=J4731_17550;product=inositol phosphorylceramide synthase;pseudo=true;transl_table=11
JAGETS010000037.1	Genbank	pseudogene	38512	38823	.	+	.	ID=gene-J4731_17555;Name=J4731_17555;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_17555;pseudo=true
JAGETS010000037.1	Protein Homology	CDS	38512	38823	.	+	0	ID=cds-J4731_17555;Parent=gene-J4731_17555;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012982.1;locus_tag=J4731_17555;product=dual specificity protein phosphatase family protein;pseudo=true;transl_table=11
JAGETS010000037.1	Genbank	pseudogene	38866	39253	.	+	.	ID=gene-J4731_17560;Name=J4731_17560;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_17560;pseudo=true
JAGETS010000037.1	Protein Homology	CDS	38866	39253	.	+	0	ID=cds-J4731_17560;Parent=gene-J4731_17560;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004255127.1;locus_tag=J4731_17560;product=hypothetical protein;pseudo=true;transl_table=11
JAGETS010000037.1	Genbank	pseudogene	39555	41259	.	+	.	ID=gene-J4731_17565;Name=dauA;gbkey=Gene;gene=dauA;gene_biotype=pseudogene;locus_tag=J4731_17565;pseudo=true
JAGETS010000037.1	Protein Homology	CDS	39555	41259	.	+	0	ID=cds-J4731_17565;Parent=gene-J4731_17565;Note=frameshifted;gbkey=CDS;gene=dauA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015461340.1;locus_tag=J4731_17565;product=C4-dicarboxylic acid transporter DauA;pseudo=true;transl_table=11
JAGETS010000037.1	Genbank	gene	41364	41546	.	-	.	ID=gene-J4731_17570;Name=J4731_17570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_17570
JAGETS010000037.1	GeneMarkS-2+	CDS	41364	41546	.	-	0	ID=cds-MBO1929453.1;Parent=gene-J4731_17570;Dbxref=NCBI_GP:MBO1929453.1;Name=MBO1929453.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_17570;product=SEL1-like repeat protein;protein_id=MBO1929453.1;transl_table=11
JAGETS010000037.1	Genbank	gene	41576	41770	.	-	.	ID=gene-J4731_17575;Name=J4731_17575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_17575
JAGETS010000037.1	GeneMarkS-2+	CDS	41576	41770	.	-	0	ID=cds-MBO1929454.1;Parent=gene-J4731_17575;Dbxref=NCBI_GP:MBO1929454.1;Name=MBO1929454.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_17575;product=hypothetical protein;protein_id=MBO1929454.1;transl_table=11
JAGETS010000037.1	Genbank	gene	41749	42033	.	-	.	ID=gene-J4731_17580;Name=J4731_17580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_17580
JAGETS010000037.1	GeneMarkS-2+	CDS	41749	42033	.	-	0	ID=cds-MBO1929455.1;Parent=gene-J4731_17580;Dbxref=NCBI_GP:MBO1929455.1;Name=MBO1929455.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_17580;product=SEL1-like repeat protein;protein_id=MBO1929455.1;transl_table=11
JAGETS010000037.1	Genbank	pseudogene	42014	42950	.	-	.	ID=gene-J4731_17585;Name=J4731_17585;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_17585;pseudo=true
JAGETS010000037.1	Protein Homology	CDS	42014	42950	.	-	0	ID=cds-J4731_17585;Parent=gene-J4731_17585;Note=This family includes YhcC from E. coli K-12%2C an uncharacterized radical SAM protein.%3B frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015961980.1;locus_tag=J4731_17585;product=TIGR01212 family radical SAM protein;pseudo=true;transl_table=11
JAGETS010000037.1	Genbank	pseudogene	42963	43815	.	-	.	ID=gene-J4731_17590;Name=kdsA;gbkey=Gene;gene=kdsA;gene_biotype=pseudogene;locus_tag=J4731_17590;pseudo=true
JAGETS010000037.1	Protein Homology	CDS	42963	43815	.	-	0	ID=cds-J4731_17590;Parent=gene-J4731_17590;Note=frameshifted;gbkey=CDS;gene=kdsA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126202.1;locus_tag=J4731_17590;product=3-deoxy-8-phosphooctulonate synthase;pseudo=true;transl_table=11
JAGETS010000037.1	Genbank	pseudogene	43861	44697	.	-	.	ID=gene-J4731_17595;Name=J4731_17595;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_17595;pseudo=true
JAGETS010000037.1	Protein Homology	CDS	43861	44697	.	-	0	ID=cds-J4731_17595;Parent=gene-J4731_17595;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004919394.1;locus_tag=J4731_17595;product=tetratricopeptide repeat protein;pseudo=true;transl_table=11
JAGETS010000037.1	Genbank	pseudogene	44655	45509	.	-	.	ID=gene-J4731_17600;Name=prmC;gbkey=Gene;gene=prmC;gene_biotype=pseudogene;locus_tag=J4731_17600;pseudo=true
JAGETS010000037.1	Protein Homology	CDS	44655	45509	.	-	0	ID=cds-J4731_17600;Parent=gene-J4731_17600;Note=frameshifted;gbkey=CDS;gene=prmC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004090350.1;locus_tag=J4731_17600;product=peptide chain release factor N(5)-glutamine methyltransferase;pseudo=true;transl_table=11
JAGETS010000037.1	Genbank	pseudogene	45509	46586	.	-	.	ID=gene-J4731_17605;Name=prfA;gbkey=Gene;gene=prfA;gene_biotype=pseudogene;locus_tag=J4731_17605;pseudo=true
JAGETS010000037.1	Protein Homology	CDS	45509	46586	.	-	0	ID=cds-J4731_17605;Parent=gene-J4731_17605;Note=frameshifted%3B internal stop;gbkey=CDS;gene=prfA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012132158.1;locus_tag=J4731_17605;product=peptide chain release factor 1;pseudo=true;transl_table=11
JAGETS010000037.1	Genbank	pseudogene	46590	47861	.	-	.	ID=gene-J4731_17610;Name=hemA;gbkey=Gene;gene=hemA;gene_biotype=pseudogene;locus_tag=J4731_17610;pseudo=true
JAGETS010000037.1	Protein Homology	CDS	46590	47861	.	-	0	ID=cds-J4731_17610;Parent=gene-J4731_17610;Note=frameshifted%3B internal stop;gbkey=CDS;gene=hemA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013184262.1;locus_tag=J4731_17610;product=glutamyl-tRNA reductase;pseudo=true;transl_table=11
JAGETS010000037.1	Genbank	pseudogene	48519	49130	.	+	.	ID=gene-J4731_17615;Name=lolB;gbkey=Gene;gene=lolB;gene_biotype=pseudogene;locus_tag=J4731_17615;pseudo=true
JAGETS010000037.1	Protein Homology	CDS	48519	49130	.	+	0	ID=cds-J4731_17615;Parent=gene-J4731_17615;Note=frameshifted;gbkey=CDS;gene=lolB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006316748.1;locus_tag=J4731_17615;product=outer membrane lipoprotein LolB;pseudo=true;transl_table=11
JAGETS010000037.1	Genbank	pseudogene	49127	49977	.	+	.	ID=gene-J4731_17620;Name=ispE;gbkey=Gene;gene=ispE;gene_biotype=pseudogene;locus_tag=J4731_17620;pseudo=true
JAGETS010000037.1	Protein Homology	CDS	49127	49977	.	+	0	ID=cds-J4731_17620;Parent=gene-J4731_17620;Note=frameshifted;gbkey=CDS;gene=ispE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004090359.1;locus_tag=J4731_17620;product=4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase;pseudo=true;transl_table=11
JAGETS010000037.1	Genbank	pseudogene	50040	50994	.	+	.	ID=gene-J4731_17625;Name=J4731_17625;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_17625;pseudo=true
JAGETS010000037.1	Protein Homology	CDS	50040	50994	.	+	0	ID=cds-J4731_17625;Parent=gene-J4731_17625;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011070153.1;locus_tag=J4731_17625;product=ribose-phosphate pyrophosphokinase;pseudo=true;transl_table=11
JAGETS010000037.1	Genbank	pseudogene	51282	51553	.	-	.	ID=gene-J4731_17630;Name=ychH;gbkey=Gene;gene=ychH;gene_biotype=pseudogene;locus_tag=J4731_17630;pseudo=true
JAGETS010000037.1	Protein Homology	CDS	51282	51553	.	-	0	ID=cds-J4731_17630;Parent=gene-J4731_17630;Note=frameshifted;gbkey=CDS;gene=ychH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004242663.1;locus_tag=J4731_17630;product=stress-induced protein YchH;pseudo=true;transl_table=11
JAGETS010000037.1	Genbank	pseudogene	51851	52437	.	+	.	ID=gene-J4731_17635;Name=pth;gbkey=Gene;gene=pth;gene_biotype=pseudogene;locus_tag=J4731_17635;pseudo=true
JAGETS010000037.1	Protein Homology	CDS	51851	52437	.	+	0	ID=cds-J4731_17635;Parent=gene-J4731_17635;Note=frameshifted;gbkey=CDS;gene=pth;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016256499.1;locus_tag=J4731_17635;product=aminoacyl-tRNA hydrolase;pseudo=true;transl_table=11
JAGETS010000037.1	Genbank	pseudogene	52539	53639	.	+	.	ID=gene-J4731_17640;Name=ychF;gbkey=Gene;gene=ychF;gene_biotype=pseudogene;locus_tag=J4731_17640;pseudo=true
JAGETS010000037.1	Protein Homology	CDS	52539	53639	.	+	0	ID=cds-J4731_17640;Parent=gene-J4731_17640;Note=frameshifted;gbkey=CDS;gene=ychF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001538644.1;locus_tag=J4731_17640;product=redox-regulated ATPase YchF;pseudo=true;transl_table=11
JAGETS010000037.1	Genbank	gene	54540	54875	.	+	.	ID=gene-J4731_17645;Name=J4731_17645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_17645
JAGETS010000037.1	Protein Homology	CDS	54540	54875	.	+	0	ID=cds-MBO1929456.1;Parent=gene-J4731_17645;Dbxref=NCBI_GP:MBO1929456.1;Name=MBO1929456.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004264112.1;locus_tag=J4731_17645;product=helix-turn-helix transcriptional regulator;protein_id=MBO1929456.1;transl_table=11
JAGETS010000037.1	Genbank	pseudogene	54935	55497	.	+	.	ID=gene-J4731_17650;Name=J4731_17650;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_17650;pseudo=true
JAGETS010000037.1	Protein Homology	CDS	54935	55497	.	+	0	ID=cds-J4731_17650;Parent=gene-J4731_17650;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006813944.1;locus_tag=J4731_17650;product=type 1 fimbrial protein;pseudo=true;transl_table=11
JAGETS010000037.1	Genbank	gene	55835	56026	.	+	.	ID=gene-J4731_17655;Name=J4731_17655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_17655
JAGETS010000037.1	GeneMarkS-2+	CDS	55835	56026	.	+	0	ID=cds-MBO1929457.1;Parent=gene-J4731_17655;Dbxref=NCBI_GP:MBO1929457.1;Name=MBO1929457.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_17655;product=hypothetical protein;protein_id=MBO1929457.1;transl_table=11
JAGETS010000037.1	Genbank	pseudogene	56126	58632	.	+	.	ID=gene-J4731_17660;Name=J4731_17660;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_17660;pseudo=true
JAGETS010000037.1	Protein Homology	CDS	56126	58632	.	+	0	ID=cds-J4731_17660;Parent=gene-J4731_17660;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004264101.1;locus_tag=J4731_17660;product=outer membrane usher protein;pseudo=true;transl_table=11
JAGETS010000037.1	Genbank	pseudogene	58771	59396	.	+	.	ID=gene-J4731_17665;Name=J4731_17665;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_17665;pseudo=true
JAGETS010000037.1	Protein Homology	CDS	58771	59396	.	+	0	ID=cds-J4731_17665;Parent=gene-J4731_17665;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004925263.1;locus_tag=J4731_17665;product=fimbria/pilus periplasmic chaperone;pseudo=true;transl_table=11
JAGETS010000037.1	Genbank	pseudogene	59438	60053	.	+	.	ID=gene-J4731_17670;Name=J4731_17670;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_17670;pseudo=true
JAGETS010000037.1	Protein Homology	CDS	59438	60053	.	+	0	ID=cds-J4731_17670;Parent=gene-J4731_17670;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004264096.1;locus_tag=J4731_17670;product=type 1 fimbrial protein;pseudo=true;transl_table=11
##sequence-region JAGETS010000038.1 1 68419
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=587
JAGETS010000038.1	Genbank	region	1	68419	.	+	.	ID=JAGETS010000038.1:1..68419;Dbxref=taxon:587;collected-by=NHLS;collection-date=2018;country=South Africa: Pretoria;gbkey=Src;isolation-source=stool;lat-lon=25.7479 S 28.2293 E;mol_type=genomic DNA;nat-host=porcine;strain=SG003
JAGETS010000038.1	Genbank	pseudogene	122	773	.	+	.	ID=gene-J4731_17675;Name=J4731_17675;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_17675;pseudo=true
JAGETS010000038.1	Protein Homology	CDS	122	773	.	+	0	ID=cds-J4731_17675;Parent=gene-J4731_17675;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313212.2;locus_tag=J4731_17675;product=FKBP-type peptidyl-prolyl cis-trans isomerase;pseudo=true;transl_table=11
JAGETS010000038.1	Genbank	pseudogene	894	1626	.	+	.	ID=gene-J4731_17680;Name=cysQ;gbkey=Gene;gene=cysQ;gene_biotype=pseudogene;locus_tag=J4731_17680;pseudo=true
JAGETS010000038.1	Protein Homology	CDS	894	1626	.	+	0	ID=cds-J4731_17680;Parent=gene-J4731_17680;Note=frameshifted%3B internal stop;gbkey=CDS;gene=cysQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019704701.1;locus_tag=J4731_17680;product=3'(2')%2C5'-bisphosphate nucleotidase CysQ;pseudo=true;transl_table=11
JAGETS010000038.1	Genbank	pseudogene	1671	3140	.	-	.	ID=gene-J4731_17685;Name=mqo;gbkey=Gene;gene=mqo;gene_biotype=pseudogene;locus_tag=J4731_17685;pseudo=true
JAGETS010000038.1	Protein Homology	CDS	1671	3140	.	-	0	ID=cds-J4731_17685;Parent=gene-J4731_17685;Note=frameshifted;gbkey=CDS;gene=mqo;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006814545.1;locus_tag=J4731_17685;product=malate dehydrogenase (quinone);pseudo=true;transl_table=11
JAGETS010000038.1	Genbank	gene	3149	3535	.	-	.	ID=gene-J4731_17690;Name=J4731_17690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_17690
JAGETS010000038.1	Protein Homology	CDS	3149	3535	.	-	0	ID=cds-MBO1929458.1;Parent=gene-J4731_17690;Dbxref=NCBI_GP:MBO1929458.1;Name=MBO1929458.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004243954.1;locus_tag=J4731_17690;product=cupin domain-containing protein;protein_id=MBO1929458.1;transl_table=11
JAGETS010000038.1	Genbank	pseudogene	3846	4431	.	-	.	ID=gene-J4731_17695;Name=J4731_17695;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_17695;pseudo=true
JAGETS010000038.1	Protein Homology	CDS	3846	4431	.	-	0	ID=cds-J4731_17695;Parent=gene-J4731_17695;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004905973.1;locus_tag=J4731_17695;product=GDP-mannose pyrophosphatase;pseudo=true;transl_table=11
JAGETS010000038.1	Genbank	pseudogene	4546	4929	.	-	.	ID=gene-J4731_17700;Name=J4731_17700;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_17700;pseudo=true
JAGETS010000038.1	Protein Homology	CDS	4546	4929	.	-	0	ID=cds-J4731_17700;Parent=gene-J4731_17700;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000712658.1;locus_tag=J4731_17700;product=YgiW/YdeI family stress tolerance OB fold protein;pseudo=true;transl_table=11
JAGETS010000038.1	Genbank	pseudogene	5125	5781	.	+	.	ID=gene-J4731_17705;Name=J4731_17705;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_17705;pseudo=true
JAGETS010000038.1	Protein Homology	CDS	5125	5781	.	+	0	ID=cds-J4731_17705;Parent=gene-J4731_17705;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013023921.1;locus_tag=J4731_17705;product=winged helix-turn-helix domain-containing protein;pseudo=true;transl_table=11
JAGETS010000038.1	Genbank	pseudogene	5781	7134	.	+	.	ID=gene-J4731_17710;Name=qseC;gbkey=Gene;gene=qseC;gene_biotype=pseudogene;locus_tag=J4731_17710;pseudo=true
JAGETS010000038.1	Protein Homology	CDS	5781	7134	.	+	0	ID=cds-J4731_17710;Parent=gene-J4731_17710;Note=frameshifted%3B internal stop;gbkey=CDS;gene=qseC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006657992.1;locus_tag=J4731_17710;product=two-component system sensor histidine kinase QseC;pseudo=true;transl_table=11
JAGETS010000038.1	Genbank	pseudogene	7347	7933	.	-	.	ID=gene-J4731_17715;Name=J4731_17715;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_17715;pseudo=true
JAGETS010000038.1	Protein Homology	CDS	7347	7933	.	-	0	ID=cds-J4731_17715;Parent=gene-J4731_17715;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004952773.1;locus_tag=J4731_17715;product=YtfJ family protein;pseudo=true;transl_table=11
JAGETS010000038.1	Genbank	gene	8171	8377	.	+	.	ID=gene-J4731_17720;Name=J4731_17720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_17720
JAGETS010000038.1	Protein Homology	CDS	8171	8377	.	+	0	ID=cds-MBO1929459.1;Parent=gene-J4731_17720;Dbxref=NCBI_GP:MBO1929459.1;Name=MBO1929459.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006535730.1;locus_tag=J4731_17720;product=DUF1107 domain-containing protein;protein_id=MBO1929459.1;transl_table=11
JAGETS010000038.1	Genbank	pseudogene	8354	9807	.	-	.	ID=gene-J4731_17725;Name=J4731_17725;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_17725;pseudo=true
JAGETS010000038.1	Protein Homology	CDS	8354	9807	.	-	0	ID=cds-J4731_17725;Parent=gene-J4731_17725;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017383933.1;locus_tag=J4731_17725;product=HlyC/CorC family transporter;pseudo=true;transl_table=11
JAGETS010000038.1	Genbank	pseudogene	10060	10697	.	-	.	ID=gene-J4731_17730;Name=msrA;gbkey=Gene;gene=msrA;gene_biotype=pseudogene;locus_tag=J4731_17730;pseudo=true
JAGETS010000038.1	Protein Homology	CDS	10060	10697	.	-	0	ID=cds-J4731_17730;Parent=gene-J4731_17730;Note=frameshifted;gbkey=CDS;gene=msrA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004905960.1;locus_tag=J4731_17730;product=peptide-methionine (S)-S-oxide reductase MsrA;pseudo=true;transl_table=11
JAGETS010000038.1	Genbank	pseudogene	10850	12551	.	+	.	ID=gene-J4731_17735;Name=J4731_17735;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_17735;pseudo=true
JAGETS010000038.1	Protein Homology	CDS	10850	12551	.	+	0	ID=cds-J4731_17735;Parent=gene-J4731_17735;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002426060.1;locus_tag=J4731_17735;product=outer membrane protein assembly factor;pseudo=true;transl_table=11
JAGETS010000038.1	Genbank	pseudogene	12548	16256	.	+	.	ID=gene-J4731_17740;Name=J4731_17740;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_17740;pseudo=true
JAGETS010000038.1	Protein Homology	CDS	12548	16256	.	+	0	ID=cds-J4731_17740;Parent=gene-J4731_17740;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012368724.1;locus_tag=J4731_17740;product=translocation/assembly module TamB;pseudo=true;transl_table=11
JAGETS010000038.1	Genbank	pseudogene	16260	16605	.	+	.	ID=gene-J4731_17745;Name=J4731_17745;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_17745;pseudo=true
JAGETS010000038.1	Protein Homology	CDS	16260	16605	.	+	0	ID=cds-J4731_17745;Parent=gene-J4731_17745;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246264.1;locus_tag=J4731_17745;product=gamma-glutamylcyclotransferase;pseudo=true;transl_table=11
JAGETS010000038.1	Genbank	pseudogene	16735	17273	.	-	.	ID=gene-J4731_17750;Name=ppa;gbkey=Gene;gene=ppa;gene_biotype=pseudogene;locus_tag=J4731_17750;pseudo=true
JAGETS010000038.1	Protein Homology	CDS	16735	17273	.	-	0	ID=cds-J4731_17750;Parent=gene-J4731_17750;Note=frameshifted;gbkey=CDS;gene=ppa;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001739810.1;locus_tag=J4731_17750;product=inorganic diphosphatase;pseudo=true;transl_table=11
JAGETS010000038.1	Genbank	pseudogene	17476	18481	.	-	.	ID=gene-J4731_17755;Name=fbp;gbkey=Gene;gene=fbp;gene_biotype=pseudogene;locus_tag=J4731_17755;pseudo=true
JAGETS010000038.1	Protein Homology	CDS	17476	18481	.	-	0	ID=cds-J4731_17755;Parent=gene-J4731_17755;Note=frameshifted;gbkey=CDS;gene=fbp;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006535716.1;locus_tag=J4731_17755;product=class 1 fructose-bisphosphatase;pseudo=true;transl_table=11
JAGETS010000038.1	Genbank	pseudogene	18645	20018	.	+	.	ID=gene-J4731_17760;Name=mpl;gbkey=Gene;gene=mpl;gene_biotype=pseudogene;locus_tag=J4731_17760;pseudo=true
JAGETS010000038.1	Protein Homology	CDS	18645	20018	.	+	0	ID=cds-J4731_17760;Parent=gene-J4731_17760;Note=frameshifted;gbkey=CDS;gene=mpl;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005272622.1;locus_tag=J4731_17760;product=UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase;pseudo=true;transl_table=11
JAGETS010000038.1	Genbank	gene	20133	20474	.	-	.	ID=gene-J4731_17765;Name=J4731_17765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_17765
JAGETS010000038.1	Protein Homology	CDS	20133	20474	.	-	0	ID=cds-MBO1929460.1;Parent=gene-J4731_17765;Dbxref=NCBI_GP:MBO1929460.1;Name=MBO1929460.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004915730.1;locus_tag=J4731_17765;product=hypothetical protein;protein_id=MBO1929460.1;transl_table=11
JAGETS010000038.1	Genbank	pseudogene	20558	21019	.	-	.	ID=gene-J4731_17770;Name=argR;gbkey=Gene;gene=argR;gene_biotype=pseudogene;locus_tag=J4731_17770;pseudo=true
JAGETS010000038.1	Protein Homology	CDS	20558	21019	.	-	0	ID=cds-J4731_17770;Parent=gene-J4731_17770;Note=frameshifted;gbkey=CDS;gene=argR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210173.1;locus_tag=J4731_17770;product=transcriptional regulator ArgR;pseudo=true;transl_table=11
JAGETS010000038.1	Genbank	pseudogene	21508	22417	.	+	.	ID=gene-J4731_17775;Name=mdh;gbkey=Gene;gene=mdh;gene_biotype=pseudogene;locus_tag=J4731_17775;pseudo=true
JAGETS010000038.1	Protein Homology	CDS	21508	22417	.	+	0	ID=cds-J4731_17775;Parent=gene-J4731_17775;Note=frameshifted;gbkey=CDS;gene=mdh;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012986959.1;locus_tag=J4731_17775;product=malate dehydrogenase;pseudo=true;transl_table=11
JAGETS010000038.1	Genbank	pseudogene	22594	22826	.	-	.	ID=gene-J4731_17780;Name=J4731_17780;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_17780;pseudo=true
JAGETS010000038.1	Protein Homology	CDS	22594	22826	.	-	0	ID=cds-J4731_17780;Parent=gene-J4731_17780;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010845223.1;locus_tag=J4731_17780;product=helix-turn-helix domain-containing protein;pseudo=true;transl_table=11
JAGETS010000038.1	Genbank	pseudogene	23338	23683	.	+	.	ID=gene-J4731_17785;Name=J4731_17785;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_17785;pseudo=true
JAGETS010000038.1	Protein Homology	CDS	23338	23683	.	+	0	ID=cds-J4731_17785;Parent=gene-J4731_17785;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014657323.1;locus_tag=J4731_17785;product=DNA-binding protein;pseudo=true;transl_table=11
JAGETS010000038.1	Genbank	pseudogene	23808	24169	.	+	.	ID=gene-J4731_17790;Name=J4731_17790;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_17790;pseudo=true
JAGETS010000038.1	Protein Homology	CDS	23808	24169	.	+	0	ID=cds-J4731_17790;Parent=gene-J4731_17790;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015376406.1;locus_tag=J4731_17790;product=putative DNA-binding transcriptional regulator;pseudo=true;transl_table=11
JAGETS010000038.1	Genbank	pseudogene	24202	25170	.	-	.	ID=gene-J4731_17795;Name=ispB;gbkey=Gene;gene=ispB;gene_biotype=pseudogene;locus_tag=J4731_17795;pseudo=true
JAGETS010000038.1	Protein Homology	CDS	24202	25170	.	-	0	ID=cds-J4731_17795;Parent=gene-J4731_17795;Note=frameshifted;gbkey=CDS;gene=ispB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010845220.1;locus_tag=J4731_17795;product=octaprenyl diphosphate synthase;pseudo=true;transl_table=11
JAGETS010000038.1	Genbank	pseudogene	25501	25808	.	+	.	ID=gene-J4731_17800;Name=rplU;gbkey=Gene;gene=rplU;gene_biotype=pseudogene;locus_tag=J4731_17800;pseudo=true
JAGETS010000038.1	Protein Homology	CDS	25501	25808	.	+	0	ID=cds-J4731_17800;Parent=gene-J4731_17800;Note=frameshifted;gbkey=CDS;gene=rplU;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015960603.1;locus_tag=J4731_17800;product=50S ribosomal protein L21;pseudo=true;transl_table=11
JAGETS010000038.1	Genbank	pseudogene	25827	26083	.	+	.	ID=gene-J4731_17805;Name=rpmA;gbkey=Gene;gene=rpmA;gene_biotype=pseudogene;locus_tag=J4731_17805;pseudo=true
JAGETS010000038.1	Protein Homology	CDS	25827	26083	.	+	0	ID=cds-J4731_17805;Parent=gene-J4731_17805;Note=frameshifted;gbkey=CDS;gene=rpmA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004933559.1;locus_tag=J4731_17805;product=50S ribosomal protein L27;pseudo=true;transl_table=11
JAGETS010000038.1	Genbank	pseudogene	26247	27416	.	+	.	ID=gene-J4731_17810;Name=cgtA;gbkey=Gene;gene=cgtA;gene_biotype=pseudogene;locus_tag=J4731_17810;pseudo=true
JAGETS010000038.1	Protein Homology	CDS	26247	27416	.	+	0	ID=cds-J4731_17810;Parent=gene-J4731_17810;Note=frameshifted;gbkey=CDS;gene=cgtA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312089.1;locus_tag=J4731_17810;product=Obg family GTPase CgtA;pseudo=true;transl_table=11
JAGETS010000038.1	Genbank	pseudogene	27623	28987	.	-	.	ID=gene-J4731_17815;Name=dacB;gbkey=Gene;gene=dacB;gene_biotype=pseudogene;locus_tag=J4731_17815;pseudo=true
JAGETS010000038.1	Protein Homology	CDS	27623	28987	.	-	0	ID=cds-J4731_17815;Parent=gene-J4731_17815;Note=frameshifted;gbkey=CDS;gene=dacB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012847269.1;locus_tag=J4731_17815;product=serine-type D-Ala-D-Ala carboxypeptidase;pseudo=true;transl_table=11
JAGETS010000038.1	Genbank	pseudogene	29307	29782	.	+	.	ID=gene-J4731_17820;Name=greA;gbkey=Gene;gene=greA;gene_biotype=pseudogene;locus_tag=J4731_17820;pseudo=true
JAGETS010000038.1	Protein Homology	CDS	29307	29782	.	+	0	ID=cds-J4731_17820;Parent=gene-J4731_17820;Note=frameshifted;gbkey=CDS;gene=greA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462210.1;locus_tag=J4731_17820;product=transcription elongation factor GreA;pseudo=true;transl_table=11
JAGETS010000038.1	Genbank	gene	29902	30183	.	-	.	ID=gene-J4731_17825;Name=J4731_17825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_17825
JAGETS010000038.1	Protein Homology	CDS	29902	30183	.	-	0	ID=cds-MBO1929461.1;Parent=gene-J4731_17825;Dbxref=NCBI_GP:MBO1929461.1;Name=MBO1929461.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014087.1;locus_tag=J4731_17825;product=YhbY family RNA-binding protein;protein_id=MBO1929461.1;transl_table=11
JAGETS010000038.1	Genbank	pseudogene	30359	30941	.	+	.	ID=gene-J4731_17830;Name=rlmE;gbkey=Gene;gene=rlmE;gene_biotype=pseudogene;locus_tag=J4731_17830;pseudo=true
JAGETS010000038.1	Protein Homology	CDS	30359	30941	.	+	0	ID=cds-J4731_17830;Parent=gene-J4731_17830;Note=frameshifted;gbkey=CDS;gene=rlmE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005156285.1;locus_tag=J4731_17830;product=23S rRNA (uridine(2552)-2'-O)-methyltransferase RlmE;pseudo=true;transl_table=11
JAGETS010000038.1	Genbank	pseudogene	31042	32807	.	+	.	ID=gene-J4731_17835;Name=ftsH;gbkey=Gene;gene=ftsH;gene_biotype=pseudogene;locus_tag=J4731_17835;pseudo=true
JAGETS010000038.1	Protein Homology	CDS	31042	32807	.	+	0	ID=cds-J4731_17835;Parent=gene-J4731_17835;Note=frameshifted;gbkey=CDS;gene=ftsH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013877966.1;locus_tag=J4731_17835;product=ATP-dependent zinc metalloprotease FtsH;pseudo=true;transl_table=11
JAGETS010000038.1	Genbank	pseudogene	33019	33848	.	+	.	ID=gene-J4731_17840;Name=folP;gbkey=Gene;gene=folP;gene_biotype=pseudogene;locus_tag=J4731_17840;pseudo=true
JAGETS010000038.1	Protein Homology	CDS	33019	33848	.	+	0	ID=cds-J4731_17840;Parent=gene-J4731_17840;Note=frameshifted;gbkey=CDS;gene=folP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006662410.1;locus_tag=J4731_17840;product=dihydropteroate synthase;pseudo=true;transl_table=11
JAGETS010000038.1	Genbank	pseudogene	33853	35173	.	+	.	ID=gene-J4731_17845;Name=glmM;gbkey=Gene;gene=glmM;gene_biotype=pseudogene;locus_tag=J4731_17845;pseudo=true
JAGETS010000038.1	Protein Homology	CDS	33853	35173	.	+	0	ID=cds-J4731_17845;Parent=gene-J4731_17845;Note=frameshifted;gbkey=CDS;gene=glmM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011148609.1;locus_tag=J4731_17845;product=phosphoglucosamine mutase;pseudo=true;transl_table=11
JAGETS010000038.1	Genbank	pseudogene	35452	35735	.	+	.	ID=gene-J4731_17850;Name=secG;gbkey=Gene;gene=secG;gene_biotype=pseudogene;locus_tag=J4731_17850;pseudo=true
JAGETS010000038.1	Protein Homology	CDS	35452	35735	.	+	0	ID=cds-J4731_17850;Parent=gene-J4731_17850;Note=frameshifted;gbkey=CDS;gene=secG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003025000.1;locus_tag=J4731_17850;product=preprotein translocase subunit SecG;pseudo=true;transl_table=11
JAGETS010000038.1	Genbank	gene	35851	35940	.	+	.	ID=gene-J4731_17855;Name=J4731_17855;gbkey=Gene;gene_biotype=tRNA;locus_tag=J4731_17855
JAGETS010000038.1	tRNAscan-SE	tRNA	35851	35940	.	+	.	ID=rna-J4731_17855;Parent=gene-J4731_17855;anticodon=(pos:35885..35887);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=J4731_17855;product=tRNA-Leu
JAGETS010000038.1	tRNAscan-SE	exon	35851	35940	.	+	.	ID=exon-J4731_17855-1;Parent=rna-J4731_17855;anticodon=(pos:35885..35887);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=J4731_17855;product=tRNA-Leu
JAGETS010000038.1	Genbank	gene	35999	36075	.	+	.	ID=gene-J4731_17860;Name=J4731_17860;gbkey=Gene;gene_biotype=tRNA;locus_tag=J4731_17860
JAGETS010000038.1	tRNAscan-SE	tRNA	35999	36075	.	+	.	ID=rna-J4731_17860;Parent=gene-J4731_17860;anticodon=(pos:36033..36035);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=J4731_17860;product=tRNA-Met
JAGETS010000038.1	tRNAscan-SE	exon	35999	36075	.	+	.	ID=exon-J4731_17860-1;Parent=rna-J4731_17860;anticodon=(pos:36033..36035);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=J4731_17860;product=tRNA-Met
JAGETS010000038.1	Genbank	gene	36323	36772	.	+	.	ID=gene-J4731_17865;Name=rimP;gbkey=Gene;gene=rimP;gene_biotype=protein_coding;locus_tag=J4731_17865
JAGETS010000038.1	Protein Homology	CDS	36323	36772	.	+	0	ID=cds-MBO1929462.1;Parent=gene-J4731_17865;Dbxref=NCBI_GP:MBO1929462.1;Name=MBO1929462.1;gbkey=CDS;gene=rimP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004125659.1;locus_tag=J4731_17865;product=ribosome maturation factor RimP;protein_id=MBO1929462.1;transl_table=11
JAGETS010000038.1	Genbank	pseudogene	36796	38284	.	+	.	ID=gene-J4731_17870;Name=nusA;gbkey=Gene;gene=nusA;gene_biotype=pseudogene;locus_tag=J4731_17870;pseudo=true
JAGETS010000038.1	Protein Homology	CDS	36796	38284	.	+	0	ID=cds-J4731_17870;Parent=gene-J4731_17870;Note=frameshifted%3B internal stop;gbkey=CDS;gene=nusA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005131833.1;locus_tag=J4731_17870;product=transcription termination/antitermination protein NusA;pseudo=true;transl_table=11
JAGETS010000038.1	Genbank	pseudogene	38308	41005	.	+	.	ID=gene-J4731_17875;Name=infB;gbkey=Gene;gene=infB;gene_biotype=pseudogene;locus_tag=J4731_17875;pseudo=true
JAGETS010000038.1	Protein Homology	CDS	38308	41005	.	+	0	ID=cds-J4731_17875;Parent=gene-J4731_17875;Note=frameshifted%3B internal stop;gbkey=CDS;gene=infB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006662413.1;locus_tag=J4731_17875;product=translation initiation factor IF-2;pseudo=true;transl_table=11
JAGETS010000038.1	Genbank	pseudogene	41128	41510	.	+	.	ID=gene-J4731_17880;Name=rbfA;gbkey=Gene;gene=rbfA;gene_biotype=pseudogene;locus_tag=J4731_17880;pseudo=true
JAGETS010000038.1	Protein Homology	CDS	41128	41510	.	+	0	ID=cds-J4731_17880;Parent=gene-J4731_17880;Note=frameshifted;gbkey=CDS;gene=rbfA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002434237.1;locus_tag=J4731_17880;product=30S ribosome-binding factor RbfA;pseudo=true;transl_table=11
JAGETS010000038.1	Genbank	pseudogene	41517	42444	.	+	.	ID=gene-J4731_17885;Name=truB;gbkey=Gene;gene=truB;gene_biotype=pseudogene;locus_tag=J4731_17885;pseudo=true
JAGETS010000038.1	Protein Homology	CDS	41517	42444	.	+	0	ID=cds-J4731_17885;Parent=gene-J4731_17885;Note=frameshifted%3B internal stop;gbkey=CDS;gene=truB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004704662.1;locus_tag=J4731_17885;product=tRNA pseudouridine(55) synthase TruB;pseudo=true;transl_table=11
JAGETS010000038.1	Genbank	pseudogene	42530	42797	.	+	.	ID=gene-J4731_17890;Name=rpsO;gbkey=Gene;gene=rpsO;gene_biotype=pseudogene;locus_tag=J4731_17890;pseudo=true
JAGETS010000038.1	Protein Homology	CDS	42530	42797	.	+	0	ID=cds-J4731_17890;Parent=gene-J4731_17890;Note=frameshifted;gbkey=CDS;gene=rpsO;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004933502.1;locus_tag=J4731_17890;product=30S ribosomal protein S15;pseudo=true;transl_table=11
JAGETS010000038.1	Genbank	pseudogene	43194	45306	.	+	.	ID=gene-J4731_17895;Name=pnp;gbkey=Gene;gene=pnp;gene_biotype=pseudogene;locus_tag=J4731_17895;pseudo=true
JAGETS010000038.1	Protein Homology	CDS	43194	45306	.	+	0	ID=cds-J4731_17895;Parent=gene-J4731_17895;Note=frameshifted%3B internal stop;gbkey=CDS;gene=pnp;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462195.1;locus_tag=J4731_17895;product=polyribonucleotide nucleotidyltransferase;pseudo=true;transl_table=11
JAGETS010000038.1	Genbank	pseudogene	45414	46296	.	+	.	ID=gene-J4731_17900;Name=nlpI;gbkey=Gene;gene=nlpI;gene_biotype=pseudogene;locus_tag=J4731_17900;pseudo=true
JAGETS010000038.1	Protein Homology	CDS	45414	46296	.	+	0	ID=cds-J4731_17900;Parent=gene-J4731_17900;Note=frameshifted;gbkey=CDS;gene=nlpI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004249600.1;locus_tag=J4731_17900;product=lipoprotein NlpI;pseudo=true;transl_table=11
JAGETS010000038.1	Genbank	pseudogene	46483	48405	.	+	.	ID=gene-J4731_17905;Name=J4731_17905;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_17905;pseudo=true
JAGETS010000038.1	Protein Homology	CDS	46483	48405	.	+	0	ID=cds-J4731_17905;Parent=gene-J4731_17905;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004915822.1;locus_tag=J4731_17905;product=DEAD/DEAH family ATP-dependent RNA helicase;pseudo=true;transl_table=11
JAGETS010000038.1	Genbank	pseudogene	48484	48827	.	-	.	ID=gene-J4731_17910;Name=J4731_17910;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_17910;pseudo=true
JAGETS010000038.1	Protein Homology	CDS	48484	48827	.	-	0	ID=cds-J4731_17910;Parent=gene-J4731_17910;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014542127.1;locus_tag=J4731_17910;product=type II toxin-antitoxin system RelE/ParE family toxin;pseudo=true;transl_table=11
JAGETS010000038.1	Genbank	pseudogene	48843	49110	.	-	.	ID=gene-J4731_17915;Name=J4731_17915;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_17915;pseudo=true
JAGETS010000038.1	Protein Homology	CDS	48843	49110	.	-	0	ID=cds-J4731_17915;Parent=gene-J4731_17915;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019080654.1;locus_tag=J4731_17915;product=hypothetical protein;pseudo=true;transl_table=11
JAGETS010000038.1	Genbank	pseudogene	49267	49974	.	-	.	ID=gene-J4731_17920;Name=yehT;gbkey=Gene;gene=yehT;gene_biotype=pseudogene;locus_tag=J4731_17920;pseudo=true
JAGETS010000038.1	Protein Homology	CDS	49267	49974	.	-	0	ID=cds-J4731_17920;Parent=gene-J4731_17920;Note=frameshifted;gbkey=CDS;gene=yehT;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006814497.1;locus_tag=J4731_17920;product=two-component system response regulator BtsR;pseudo=true;transl_table=11
JAGETS010000038.1	Genbank	pseudogene	49994	51632	.	-	.	ID=gene-J4731_17925;Name=J4731_17925;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_17925;pseudo=true
JAGETS010000038.1	Protein Homology	CDS	49994	51632	.	-	0	ID=cds-J4731_17925;Parent=gene-J4731_17925;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005128561.1;locus_tag=J4731_17925;product=sensor histidine kinase;pseudo=true;transl_table=11
JAGETS010000038.1	Genbank	pseudogene	52342	53265	.	+	.	ID=gene-J4731_17930;Name=J4731_17930;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_17930;pseudo=true
JAGETS010000038.1	Protein Homology	CDS	52342	53265	.	+	0	ID=cds-J4731_17930;Parent=gene-J4731_17930;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006323275.1;locus_tag=J4731_17930;product=efflux RND transporter periplasmic adaptor subunit;pseudo=true;transl_table=11
JAGETS010000038.1	Genbank	pseudogene	53332	54407	.	+	.	ID=gene-J4731_17935;Name=J4731_17935;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_17935;pseudo=true
JAGETS010000038.1	Protein Homology	CDS	53332	54407	.	+	0	ID=cds-J4731_17935;Parent=gene-J4731_17935;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004234577.1;locus_tag=J4731_17935;product=ABC transporter permease;pseudo=true;transl_table=11
JAGETS010000038.1	Genbank	pseudogene	54407	55539	.	+	.	ID=gene-J4731_17940;Name=J4731_17940;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_17940;pseudo=true
JAGETS010000038.1	Protein Homology	CDS	54407	55539	.	+	0	ID=cds-J4731_17940;Parent=gene-J4731_17940;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012368735.1;locus_tag=J4731_17940;product=ABC transporter permease;pseudo=true;transl_table=11
JAGETS010000038.1	Genbank	pseudogene	55663	55950	.	+	.	ID=gene-J4731_17945;Name=J4731_17945;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_17945;pseudo=true
JAGETS010000038.1	Protein Homology	CDS	55663	55950	.	+	0	ID=cds-J4731_17945;Parent=gene-J4731_17945;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004905876.1;locus_tag=J4731_17945;product=type II toxin-antitoxin system RelB/DinJ family antitoxin;pseudo=true;transl_table=11
JAGETS010000038.1	Genbank	pseudogene	55931	56243	.	+	.	ID=gene-J4731_17950;Name=J4731_17950;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_17950;pseudo=true
JAGETS010000038.1	Protein Homology	CDS	55931	56243	.	+	0	ID=cds-J4731_17950;Parent=gene-J4731_17950;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004905874.1;locus_tag=J4731_17950;product=type II toxin-antitoxin system YafQ family toxin;pseudo=true;transl_table=11
JAGETS010000038.1	Genbank	pseudogene	56283	57150	.	-	.	ID=gene-J4731_17955;Name=J4731_17955;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_17955;pseudo=true
JAGETS010000038.1	Protein Homology	CDS	56283	57150	.	-	0	ID=cds-J4731_17955;Parent=gene-J4731_17955;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004905872.1;locus_tag=J4731_17955;product=U32 family peptidase;pseudo=true;transl_table=11
JAGETS010000038.1	Genbank	pseudogene	57167	58152	.	-	.	ID=gene-J4731_17960;Name=J4731_17960;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_17960;pseudo=true
JAGETS010000038.1	Protein Homology	CDS	57167	58152	.	-	0	ID=cds-J4731_17960;Parent=gene-J4731_17960;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017457364.1;locus_tag=J4731_17960;product=U32 family peptidase;pseudo=true;transl_table=11
JAGETS010000038.1	Genbank	pseudogene	58659	59183	.	+	.	ID=gene-J4731_17965;Name=J4731_17965;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_17965;pseudo=true
JAGETS010000038.1	Protein Homology	CDS	58659	59183	.	+	0	ID=cds-J4731_17965;Parent=gene-J4731_17965;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006662421.1;locus_tag=J4731_17965;product=SCP2 domain-containing protein;pseudo=true;transl_table=11
JAGETS010000038.1	Genbank	pseudogene	59177	59677	.	+	.	ID=gene-J4731_17970;Name=J4731_17970;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_17970;pseudo=true
JAGETS010000038.1	Protein Homology	CDS	59177	59677	.	+	0	ID=cds-J4731_17970;Parent=gene-J4731_17970;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006657943.1;locus_tag=J4731_17970;product=N-acetyltransferase;pseudo=true;transl_table=11
JAGETS010000038.1	Genbank	pseudogene	59650	59905	.	-	.	ID=gene-J4731_17975;Name=J4731_17975;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_17975;pseudo=true
JAGETS010000038.1	Protein Homology	CDS	59650	59905	.	-	0	ID=cds-J4731_17975;Parent=gene-J4731_17975;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015836082.1;locus_tag=J4731_17975;product=GIY-YIG nuclease family protein;pseudo=true;transl_table=11
JAGETS010000038.1	Genbank	pseudogene	60313	60500	.	+	.	ID=gene-J4731_17980;Name=J4731_17980;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_17980;pseudo=true
JAGETS010000038.1	Protein Homology	CDS	60313	60500	.	+	0	ID=cds-J4731_17980;Parent=gene-J4731_17980;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015740866.1;locus_tag=J4731_17980;product=DUF1471 domain-containing protein;pseudo=true;transl_table=11
JAGETS010000038.1	Genbank	pseudogene	60801	61249	.	+	.	ID=gene-J4731_17985;Name=J4731_17985;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_17985;pseudo=true
JAGETS010000038.1	Protein Homology	CDS	60801	61249	.	+	0	ID=cds-J4731_17985;Parent=gene-J4731_17985;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004905860.1;locus_tag=J4731_17985;product=hypothetical protein;pseudo=true;transl_table=11
JAGETS010000038.1	Genbank	pseudogene	61246	61700	.	-	.	ID=gene-J4731_17990;Name=nrdG;gbkey=Gene;gene=nrdG;gene_biotype=pseudogene;locus_tag=J4731_17990;pseudo=true
JAGETS010000038.1	Protein Homology	CDS	61246	61700	.	-	0	ID=cds-J4731_17990;Parent=gene-J4731_17990;Note=frameshifted;gbkey=CDS;gene=nrdG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004252969.1;locus_tag=J4731_17990;product=anaerobic ribonucleoside-triphosphate reductase-activating protein;pseudo=true;transl_table=11
JAGETS010000038.1	Genbank	pseudogene	61705	63772	.	-	.	ID=gene-J4731_17995;Name=nrdD;gbkey=Gene;gene=nrdD;gene_biotype=pseudogene;locus_tag=J4731_17995;pseudo=true
JAGETS010000038.1	Protein Homology	CDS	61705	63772	.	-	0	ID=cds-J4731_17995;Parent=gene-J4731_17995;Note=frameshifted;gbkey=CDS;gene=nrdD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709963.1;locus_tag=J4731_17995;product=anaerobic ribonucleoside-triphosphate reductase;pseudo=true;transl_table=11
JAGETS010000038.1	Genbank	pseudogene	64226	64595	.	-	.	ID=gene-J4731_18000;Name=J4731_18000;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_18000;pseudo=true
JAGETS010000038.1	Protein Homology	CDS	64226	64595	.	-	0	ID=cds-J4731_18000;Parent=gene-J4731_18000;Note=has endoribonuclease activity on mRNA%3B frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418664.2;locus_tag=J4731_18000;product=reactive intermediate/imine deaminase;pseudo=true;transl_table=11
JAGETS010000038.1	Genbank	pseudogene	64758	65219	.	-	.	ID=gene-J4731_18005;Name=J4731_18005;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_18005;pseudo=true
JAGETS010000038.1	Protein Homology	CDS	64758	65219	.	-	0	ID=cds-J4731_18005;Parent=gene-J4731_18005;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004915901.1;locus_tag=J4731_18005;product=aspartate carbamoyltransferase regulatory subunit;pseudo=true;transl_table=11
JAGETS010000038.1	Genbank	pseudogene	65232	66147	.	-	.	ID=gene-J4731_18010;Name=pyrB;gbkey=Gene;gene=pyrB;gene_biotype=pseudogene;locus_tag=J4731_18010;pseudo=true
JAGETS010000038.1	Protein Homology	CDS	65232	66147	.	-	0	ID=cds-J4731_18010;Parent=gene-J4731_18010;Note=frameshifted;gbkey=CDS;gene=pyrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313249.1;locus_tag=J4731_18010;product=aspartate carbamoyltransferase;pseudo=true;transl_table=11
JAGETS010000038.1	Genbank	pseudogene	66587	66933	.	+	.	ID=gene-J4731_18015;Name=J4731_18015;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_18015;pseudo=true
JAGETS010000038.1	Protein Homology	CDS	66587	66933	.	+	0	ID=cds-J4731_18015;Parent=gene-J4731_18015;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004239914.1;locus_tag=J4731_18015;product=hypothetical protein;pseudo=true;transl_table=11
JAGETS010000038.1	Genbank	gene	67100	67720	.	-	.	ID=gene-J4731_18020;Name=J4731_18020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_18020
JAGETS010000038.1	Protein Homology	CDS	67100	67720	.	-	0	ID=cds-MBO1929463.1;Parent=gene-J4731_18020;Dbxref=NCBI_GP:MBO1929463.1;Name=MBO1929463.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012738.1;locus_tag=J4731_18020;product=ABC transporter permease subunit;protein_id=MBO1929463.1;transl_table=11
JAGETS010000038.1	Genbank	pseudogene	67768	68419	.	-	.	ID=gene-J4731_18025;Name=phnU;gbkey=Gene;gene=phnU;gene_biotype=pseudogene;locus_tag=J4731_18025;pseudo=true
JAGETS010000038.1	Protein Homology	CDS	67768	68419	.	-	0	ID=cds-J4731_18025;Parent=gene-J4731_18025;Note=frameshifted%3B internal stop%3B incomplete%3B missing N-terminus;gbkey=CDS;gene=phnU;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006817817.1;locus_tag=J4731_18025;product=2-aminoethylphosphonate ABC transporter permease subunit;pseudo=true;transl_table=11
##sequence-region JAGETS010000039.1 1 7395
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=587
JAGETS010000039.1	Genbank	region	1	7395	.	+	.	ID=JAGETS010000039.1:1..7395;Dbxref=taxon:587;collected-by=NHLS;collection-date=2018;country=South Africa: Pretoria;gbkey=Src;isolation-source=stool;lat-lon=25.7479 S 28.2293 E;mol_type=genomic DNA;nat-host=porcine;strain=SG003
JAGETS010000039.1	Genbank	gene	49	273	.	-	.	ID=gene-J4731_18030;Name=J4731_18030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_18030
JAGETS010000039.1	GeneMarkS-2+	CDS	49	273	.	-	0	ID=cds-MBO1929464.1;Parent=gene-J4731_18030;Dbxref=NCBI_GP:MBO1929464.1;Name=MBO1929464.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_18030;product=hypothetical protein;protein_id=MBO1929464.1;transl_table=11
JAGETS010000039.1	Genbank	gene	394	534	.	-	.	ID=gene-J4731_18035;Name=J4731_18035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_18035
JAGETS010000039.1	GeneMarkS-2+	CDS	394	534	.	-	0	ID=cds-MBO1929465.1;Parent=gene-J4731_18035;Dbxref=NCBI_GP:MBO1929465.1;Name=MBO1929465.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_18035;product=hypothetical protein;protein_id=MBO1929465.1;transl_table=11
JAGETS010000039.1	Genbank	gene	803	1039	.	-	.	ID=gene-J4731_18040;Name=J4731_18040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_18040
JAGETS010000039.1	GeneMarkS-2+	CDS	803	1039	.	-	0	ID=cds-MBO1929466.1;Parent=gene-J4731_18040;Dbxref=NCBI_GP:MBO1929466.1;Name=MBO1929466.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_18040;product=hypothetical protein;protein_id=MBO1929466.1;transl_table=11
JAGETS010000039.1	Genbank	gene	1074	1241	.	-	.	ID=gene-J4731_18045;Name=J4731_18045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_18045
JAGETS010000039.1	GeneMarkS-2+	CDS	1074	1241	.	-	0	ID=cds-MBO1929467.1;Parent=gene-J4731_18045;Dbxref=NCBI_GP:MBO1929467.1;Name=MBO1929467.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_18045;product=hypothetical protein;protein_id=MBO1929467.1;transl_table=11
JAGETS010000039.1	Genbank	pseudogene	1876	2519	.	-	.	ID=gene-J4731_18050;Name=J4731_18050;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_18050;pseudo=true
JAGETS010000039.1	Protein Homology	CDS	1876	2519	.	-	0	ID=cds-J4731_18050;Parent=gene-J4731_18050;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_032495680.1;locus_tag=J4731_18050;product=QnrD family quinolone resistance pentapeptide repeat protein;pseudo=true;transl_table=11
JAGETS010000039.1	Genbank	gene	2716	3024	.	-	.	ID=gene-J4731_18055;Name=J4731_18055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_18055
JAGETS010000039.1	GeneMarkS-2+	CDS	2716	3024	.	-	0	ID=cds-MBO1929468.1;Parent=gene-J4731_18055;Dbxref=NCBI_GP:MBO1929468.1;Name=MBO1929468.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_18055;product=hypothetical protein;protein_id=MBO1929468.1;transl_table=11
JAGETS010000039.1	Genbank	gene	3062	3202	.	-	.	ID=gene-J4731_18060;Name=J4731_18060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_18060
JAGETS010000039.1	GeneMarkS-2+	CDS	3062	3202	.	-	0	ID=cds-MBO1929469.1;Parent=gene-J4731_18060;Dbxref=NCBI_GP:MBO1929469.1;Name=MBO1929469.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_18060;product=hypothetical protein;protein_id=MBO1929469.1;transl_table=11
JAGETS010000039.1	Genbank	gene	3471	3707	.	-	.	ID=gene-J4731_18065;Name=J4731_18065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_18065
JAGETS010000039.1	GeneMarkS-2+	CDS	3471	3707	.	-	0	ID=cds-MBO1929470.1;Parent=gene-J4731_18065;Dbxref=NCBI_GP:MBO1929470.1;Name=MBO1929470.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_18065;product=hypothetical protein;protein_id=MBO1929470.1;transl_table=11
JAGETS010000039.1	Genbank	gene	3704	3910	.	-	.	ID=gene-J4731_18070;Name=J4731_18070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_18070
JAGETS010000039.1	GeneMarkS-2+	CDS	3704	3910	.	-	0	ID=cds-MBO1929471.1;Parent=gene-J4731_18070;Dbxref=NCBI_GP:MBO1929471.1;Name=MBO1929471.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_18070;product=hypothetical protein;protein_id=MBO1929471.1;transl_table=11
JAGETS010000039.1	Genbank	pseudogene	4546	5187	.	-	.	ID=gene-J4731_18075;Name=J4731_18075;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_18075;pseudo=true
JAGETS010000039.1	Protein Homology	CDS	4546	5187	.	-	0	ID=cds-J4731_18075;Parent=gene-J4731_18075;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_032495680.1;locus_tag=J4731_18075;product=QnrD family quinolone resistance pentapeptide repeat protein;pseudo=true;transl_table=11
JAGETS010000039.1	Genbank	gene	5384	5623	.	-	.	ID=gene-J4731_18080;Name=J4731_18080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_18080
JAGETS010000039.1	GeneMarkS-2+	CDS	5384	5623	.	-	0	ID=cds-MBO1929472.1;Parent=gene-J4731_18080;Dbxref=NCBI_GP:MBO1929472.1;Name=MBO1929472.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_18080;product=hypothetical protein;protein_id=MBO1929472.1;transl_table=11
JAGETS010000039.1	Genbank	gene	5729	5869	.	-	.	ID=gene-J4731_18085;Name=J4731_18085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_18085
JAGETS010000039.1	GeneMarkS-2+	CDS	5729	5869	.	-	0	ID=cds-MBO1929473.1;Parent=gene-J4731_18085;Dbxref=NCBI_GP:MBO1929473.1;Name=MBO1929473.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_18085;product=hypothetical protein;protein_id=MBO1929473.1;transl_table=11
JAGETS010000039.1	Genbank	gene	6182	6373	.	-	.	ID=gene-J4731_18090;Name=J4731_18090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_18090
JAGETS010000039.1	GeneMarkS-2+	CDS	6182	6373	.	-	0	ID=cds-MBO1929474.1;Parent=gene-J4731_18090;Dbxref=NCBI_GP:MBO1929474.1;Name=MBO1929474.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_18090;product=hypothetical protein;protein_id=MBO1929474.1;transl_table=11
JAGETS010000039.1	Genbank	gene	6370	6576	.	-	.	ID=gene-J4731_18095;Name=J4731_18095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_18095
JAGETS010000039.1	GeneMarkS-2+	CDS	6370	6576	.	-	0	ID=cds-MBO1929475.1;Parent=gene-J4731_18095;Dbxref=NCBI_GP:MBO1929475.1;Name=MBO1929475.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_18095;product=hypothetical protein;protein_id=MBO1929475.1;transl_table=11
JAGETS010000039.1	Genbank	pseudogene	7210	7395	.	-	.	ID=gene-J4731_18100;Name=J4731_18100;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_18100;pseudo=true
JAGETS010000039.1	Protein Homology	CDS	7210	7395	.	-	1	ID=cds-J4731_18100;Parent=gene-J4731_18100;Note=frameshifted%3B incomplete%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_032495680.1;locus_tag=J4731_18100;product=QnrD family quinolone resistance pentapeptide repeat protein;pseudo=true;transl_table=11
##sequence-region JAGETS010000004.1 1 2214
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=587
JAGETS010000004.1	Genbank	region	1	2214	.	+	.	ID=JAGETS010000004.1:1..2214;Dbxref=taxon:587;collected-by=NHLS;collection-date=2018;country=South Africa: Pretoria;gbkey=Src;isolation-source=stool;lat-lon=25.7479 S 28.2293 E;mol_type=genomic DNA;nat-host=porcine;strain=SG003
JAGETS010000004.1	Genbank	pseudogene	17	1433	.	+	.	ID=gene-J4731_01590;Name=J4731_01590;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_01590;pseudo=true
JAGETS010000004.1	Protein Homology	CDS	17	1433	.	+	0	ID=cds-J4731_01590;Parent=gene-J4731_01590;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003734337.1;locus_tag=J4731_01590;product=tyrosine-type recombinase/integrase;pseudo=true;transl_table=11
JAGETS010000004.1	Genbank	gene	2125	2214	.	+	.	ID=gene-J4731_01595;Name=J4731_01595;end_range=2214,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_01595;partial=true
JAGETS010000004.1	Protein Homology	CDS	2125	2214	.	+	0	ID=cds-MBO1928622.1;Parent=gene-J4731_01595;Dbxref=NCBI_GP:MBO1928622.1;Name=MBO1928622.1;end_range=2214,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002333496.1;locus_tag=J4731_01595;partial=true;product=lincosamide nucleotidyltransferase Lnu(B);protein_id=MBO1928622.1;transl_table=11
##sequence-region JAGETS010000040.1 1 5253
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=587
JAGETS010000040.1	Genbank	region	1	5253	.	+	.	ID=JAGETS010000040.1:1..5253;Dbxref=taxon:587;collected-by=NHLS;collection-date=2018;country=South Africa: Pretoria;gbkey=Src;isolation-source=stool;lat-lon=25.7479 S 28.2293 E;mol_type=genomic DNA;nat-host=porcine;strain=SG003
JAGETS010000040.1	Genbank	gene	474	665	.	-	.	ID=gene-J4731_18105;Name=J4731_18105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_18105
JAGETS010000040.1	GeneMarkS-2+	CDS	474	665	.	-	0	ID=cds-MBO1929476.1;Parent=gene-J4731_18105;Dbxref=NCBI_GP:MBO1929476.1;Name=MBO1929476.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_18105;product=hypothetical protein;protein_id=MBO1929476.1;transl_table=11
JAGETS010000040.1	Genbank	gene	662	868	.	-	.	ID=gene-J4731_18110;Name=J4731_18110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_18110
JAGETS010000040.1	GeneMarkS-2+	CDS	662	868	.	-	0	ID=cds-MBO1929477.1;Parent=gene-J4731_18110;Dbxref=NCBI_GP:MBO1929477.1;Name=MBO1929477.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_18110;product=hypothetical protein;protein_id=MBO1929477.1;transl_table=11
JAGETS010000040.1	Genbank	pseudogene	1501	2101	.	-	.	ID=gene-J4731_18115;Name=J4731_18115;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_18115;pseudo=true
JAGETS010000040.1	Protein Homology	CDS	1501	2101	.	-	0	ID=cds-J4731_18115;Parent=gene-J4731_18115;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004943345.1;locus_tag=J4731_18115;product=QnrD family quinolone resistance pentapeptide repeat protein;pseudo=true;transl_table=11
JAGETS010000040.1	Genbank	gene	2339	2656	.	-	.	ID=gene-J4731_18120;Name=J4731_18120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_18120
JAGETS010000040.1	GeneMarkS-2+	CDS	2339	2656	.	-	0	ID=cds-MBO1929478.1;Parent=gene-J4731_18120;Dbxref=NCBI_GP:MBO1929478.1;Name=MBO1929478.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_18120;product=hypothetical protein;protein_id=MBO1929478.1;transl_table=11
JAGETS010000040.1	Genbank	gene	2678	2818	.	-	.	ID=gene-J4731_18125;Name=J4731_18125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_18125
JAGETS010000040.1	GeneMarkS-2+	CDS	2678	2818	.	-	0	ID=cds-MBO1929479.1;Parent=gene-J4731_18125;Dbxref=NCBI_GP:MBO1929479.1;Name=MBO1929479.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_18125;product=hypothetical protein;protein_id=MBO1929479.1;transl_table=11
JAGETS010000040.1	Genbank	gene	3131	3322	.	-	.	ID=gene-J4731_18130;Name=J4731_18130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_18130
JAGETS010000040.1	GeneMarkS-2+	CDS	3131	3322	.	-	0	ID=cds-MBO1929480.1;Parent=gene-J4731_18130;Dbxref=NCBI_GP:MBO1929480.1;Name=MBO1929480.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_18130;product=hypothetical protein;protein_id=MBO1929480.1;transl_table=11
JAGETS010000040.1	Genbank	gene	3319	3525	.	-	.	ID=gene-J4731_18135;Name=J4731_18135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_18135
JAGETS010000040.1	GeneMarkS-2+	CDS	3319	3525	.	-	0	ID=cds-MBO1929481.1;Parent=gene-J4731_18135;Dbxref=NCBI_GP:MBO1929481.1;Name=MBO1929481.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_18135;product=hypothetical protein;protein_id=MBO1929481.1;transl_table=11
JAGETS010000040.1	Genbank	pseudogene	4158	4798	.	-	.	ID=gene-J4731_18140;Name=J4731_18140;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_18140;pseudo=true
JAGETS010000040.1	Protein Homology	CDS	4158	4798	.	-	0	ID=cds-J4731_18140;Parent=gene-J4731_18140;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_032495680.1;locus_tag=J4731_18140;product=QnrD family quinolone resistance pentapeptide repeat protein;pseudo=true;transl_table=11
JAGETS010000040.1	Genbank	gene	5007	5253	.	-	.	ID=gene-J4731_18145;Name=J4731_18145;end_range=5253,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_18145;partial=true
JAGETS010000040.1	GeneMarkS-2+	CDS	5007	5253	.	-	1	ID=cds-MBO1929482.1;Parent=gene-J4731_18145;Dbxref=NCBI_GP:MBO1929482.1;Name=MBO1929482.1;end_range=5253,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_18145;partial=true;product=hypothetical protein;protein_id=MBO1929482.1;transl_table=11
##sequence-region JAGETS010000041.1 1 3117
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=587
JAGETS010000041.1	Genbank	region	1	3117	.	+	.	ID=JAGETS010000041.1:1..3117;Dbxref=taxon:587;collected-by=NHLS;collection-date=2018;country=South Africa: Pretoria;gbkey=Src;isolation-source=stool;lat-lon=25.7479 S 28.2293 E;mol_type=genomic DNA;nat-host=porcine;strain=SG003
JAGETS010000041.1	Genbank	pseudogene	101	734	.	-	.	ID=gene-J4731_18150;Name=J4731_18150;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_18150;pseudo=true
JAGETS010000041.1	Protein Homology	CDS	101	734	.	-	0	ID=cds-J4731_18150;Parent=gene-J4731_18150;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_032495680.1;locus_tag=J4731_18150;product=QnrD family quinolone resistance pentapeptide repeat protein;pseudo=true;transl_table=11
JAGETS010000041.1	Genbank	gene	976	1416	.	-	.	ID=gene-J4731_18155;Name=J4731_18155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_18155
JAGETS010000041.1	GeneMarkS-2+	CDS	976	1416	.	-	0	ID=cds-MBO1929483.1;Parent=gene-J4731_18155;Dbxref=NCBI_GP:MBO1929483.1;Name=MBO1929483.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_18155;product=hypothetical protein;protein_id=MBO1929483.1;transl_table=11
JAGETS010000041.1	Genbank	gene	1685	1921	.	-	.	ID=gene-J4731_18160;Name=J4731_18160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_18160
JAGETS010000041.1	GeneMarkS-2+	CDS	1685	1921	.	-	0	ID=cds-MBO1929484.1;Parent=gene-J4731_18160;Dbxref=NCBI_GP:MBO1929484.1;Name=MBO1929484.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_18160;product=hypothetical protein;protein_id=MBO1929484.1;transl_table=11
JAGETS010000041.1	Genbank	gene	1918	2124	.	-	.	ID=gene-J4731_18165;Name=J4731_18165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_18165
JAGETS010000041.1	GeneMarkS-2+	CDS	1918	2124	.	-	0	ID=cds-MBO1929485.1;Parent=gene-J4731_18165;Dbxref=NCBI_GP:MBO1929485.1;Name=MBO1929485.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_18165;product=hypothetical protein;protein_id=MBO1929485.1;transl_table=11
JAGETS010000041.1	Genbank	pseudogene	2758	3117	.	-	.	ID=gene-J4731_18170;Name=J4731_18170;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_18170;pseudo=true
JAGETS010000041.1	Protein Homology	CDS	2758	3117	.	-	0	ID=cds-J4731_18170;Parent=gene-J4731_18170;Note=frameshifted%3B incomplete%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_032495680.1;locus_tag=J4731_18170;product=pentapeptide repeat-containing protein;pseudo=true;transl_table=11
##sequence-region JAGETS010000042.1 1 5302
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=587
JAGETS010000042.1	Genbank	region	1	5302	.	+	.	ID=JAGETS010000042.1:1..5302;Dbxref=taxon:587;collected-by=NHLS;collection-date=2018;country=South Africa: Pretoria;gbkey=Src;isolation-source=stool;lat-lon=25.7479 S 28.2293 E;mol_type=genomic DNA;nat-host=porcine;strain=SG003
JAGETS010000042.1	Genbank	pseudogene	60	701	.	-	.	ID=gene-J4731_18175;Name=J4731_18175;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_18175;pseudo=true
JAGETS010000042.1	Protein Homology	CDS	60	701	.	-	0	ID=cds-J4731_18175;Parent=gene-J4731_18175;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_032495680.1;locus_tag=J4731_18175;product=QnrD family quinolone resistance pentapeptide repeat protein;pseudo=true;transl_table=11
JAGETS010000042.1	Genbank	gene	898	1218	.	-	.	ID=gene-J4731_18180;Name=J4731_18180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_18180
JAGETS010000042.1	GeneMarkS-2+	CDS	898	1218	.	-	0	ID=cds-MBO1929486.1;Parent=gene-J4731_18180;Dbxref=NCBI_GP:MBO1929486.1;Name=MBO1929486.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_18180;product=hypothetical protein;protein_id=MBO1929486.1;transl_table=11
JAGETS010000042.1	Genbank	gene	1242	1382	.	-	.	ID=gene-J4731_18185;Name=J4731_18185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_18185
JAGETS010000042.1	GeneMarkS-2+	CDS	1242	1382	.	-	0	ID=cds-MBO1929487.1;Parent=gene-J4731_18185;Dbxref=NCBI_GP:MBO1929487.1;Name=MBO1929487.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_18185;product=hypothetical protein;protein_id=MBO1929487.1;transl_table=11
JAGETS010000042.1	Genbank	gene	1647	1883	.	-	.	ID=gene-J4731_18190;Name=J4731_18190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_18190
JAGETS010000042.1	GeneMarkS-2+	CDS	1647	1883	.	-	0	ID=cds-MBO1929488.1;Parent=gene-J4731_18190;Dbxref=NCBI_GP:MBO1929488.1;Name=MBO1929488.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_18190;product=hypothetical protein;protein_id=MBO1929488.1;transl_table=11
JAGETS010000042.1	Genbank	gene	1880	2086	.	-	.	ID=gene-J4731_18195;Name=J4731_18195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_18195
JAGETS010000042.1	GeneMarkS-2+	CDS	1880	2086	.	-	0	ID=cds-MBO1929489.1;Parent=gene-J4731_18195;Dbxref=NCBI_GP:MBO1929489.1;Name=MBO1929489.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_18195;product=hypothetical protein;protein_id=MBO1929489.1;transl_table=11
JAGETS010000042.1	Genbank	pseudogene	2721	3322	.	-	.	ID=gene-J4731_18200;Name=J4731_18200;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_18200;pseudo=true
JAGETS010000042.1	Protein Homology	CDS	2721	3322	.	-	0	ID=cds-J4731_18200;Parent=gene-J4731_18200;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004943345.1;locus_tag=J4731_18200;product=QnrD family quinolone resistance pentapeptide repeat protein;pseudo=true;transl_table=11
JAGETS010000042.1	Genbank	gene	3560	3868	.	-	.	ID=gene-J4731_18205;Name=J4731_18205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_18205
JAGETS010000042.1	GeneMarkS-2+	CDS	3560	3868	.	-	0	ID=cds-MBO1929490.1;Parent=gene-J4731_18205;Dbxref=NCBI_GP:MBO1929490.1;Name=MBO1929490.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_18205;product=hypothetical protein;protein_id=MBO1929490.1;transl_table=11
JAGETS010000042.1	Genbank	gene	3906	4046	.	-	.	ID=gene-J4731_18210;Name=J4731_18210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_18210
JAGETS010000042.1	GeneMarkS-2+	CDS	3906	4046	.	-	0	ID=cds-MBO1929491.1;Parent=gene-J4731_18210;Dbxref=NCBI_GP:MBO1929491.1;Name=MBO1929491.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_18210;product=hypothetical protein;protein_id=MBO1929491.1;transl_table=11
JAGETS010000042.1	Genbank	gene	4358	4549	.	-	.	ID=gene-J4731_18215;Name=J4731_18215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_18215
JAGETS010000042.1	GeneMarkS-2+	CDS	4358	4549	.	-	0	ID=cds-MBO1929492.1;Parent=gene-J4731_18215;Dbxref=NCBI_GP:MBO1929492.1;Name=MBO1929492.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_18215;product=hypothetical protein;protein_id=MBO1929492.1;transl_table=11
JAGETS010000042.1	Genbank	gene	4546	4752	.	-	.	ID=gene-J4731_18220;Name=J4731_18220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_18220
JAGETS010000042.1	GeneMarkS-2+	CDS	4546	4752	.	-	0	ID=cds-MBO1929493.1;Parent=gene-J4731_18220;Dbxref=NCBI_GP:MBO1929493.1;Name=MBO1929493.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_18220;product=hypothetical protein;protein_id=MBO1929493.1;transl_table=11
##sequence-region JAGETS010000043.1 1 4423
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=587
JAGETS010000043.1	Genbank	region	1	4423	.	+	.	ID=JAGETS010000043.1:1..4423;Dbxref=taxon:587;collected-by=NHLS;collection-date=2018;country=South Africa: Pretoria;gbkey=Src;isolation-source=stool;lat-lon=25.7479 S 28.2293 E;mol_type=genomic DNA;nat-host=porcine;strain=SG003
JAGETS010000043.1	Genbank	pseudogene	316	954	.	-	.	ID=gene-J4731_18225;Name=J4731_18225;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_18225;pseudo=true
JAGETS010000043.1	Protein Homology	CDS	316	954	.	-	0	ID=cds-J4731_18225;Parent=gene-J4731_18225;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_032495680.1;locus_tag=J4731_18225;product=QnrD family quinolone resistance pentapeptide repeat protein;pseudo=true;transl_table=11
JAGETS010000043.1	Genbank	gene	1245	1460	.	-	.	ID=gene-J4731_18230;Name=J4731_18230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_18230
JAGETS010000043.1	GeneMarkS-2+	CDS	1245	1460	.	-	0	ID=cds-MBO1929494.1;Parent=gene-J4731_18230;Dbxref=NCBI_GP:MBO1929494.1;Name=MBO1929494.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_18230;product=hypothetical protein;protein_id=MBO1929494.1;transl_table=11
JAGETS010000043.1	Genbank	gene	1498	1638	.	-	.	ID=gene-J4731_18235;Name=J4731_18235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_18235
JAGETS010000043.1	GeneMarkS-2+	CDS	1498	1638	.	-	0	ID=cds-MBO1929495.1;Parent=gene-J4731_18235;Dbxref=NCBI_GP:MBO1929495.1;Name=MBO1929495.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_18235;product=hypothetical protein;protein_id=MBO1929495.1;transl_table=11
JAGETS010000043.1	Genbank	gene	1907	2143	.	-	.	ID=gene-J4731_18240;Name=J4731_18240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_18240
JAGETS010000043.1	GeneMarkS-2+	CDS	1907	2143	.	-	0	ID=cds-MBO1929496.1;Parent=gene-J4731_18240;Dbxref=NCBI_GP:MBO1929496.1;Name=MBO1929496.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_18240;product=hypothetical protein;protein_id=MBO1929496.1;transl_table=11
JAGETS010000043.1	Genbank	gene	2178	2345	.	-	.	ID=gene-J4731_18245;Name=J4731_18245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_18245
JAGETS010000043.1	GeneMarkS-2+	CDS	2178	2345	.	-	0	ID=cds-MBO1929497.1;Parent=gene-J4731_18245;Dbxref=NCBI_GP:MBO1929497.1;Name=MBO1929497.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_18245;product=hypothetical protein;protein_id=MBO1929497.1;transl_table=11
JAGETS010000043.1	Genbank	pseudogene	2980	3580	.	-	.	ID=gene-J4731_18250;Name=J4731_18250;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_18250;pseudo=true
JAGETS010000043.1	Protein Homology	CDS	2980	3580	.	-	0	ID=cds-J4731_18250;Parent=gene-J4731_18250;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004943345.1;locus_tag=J4731_18250;product=QnrD family quinolone resistance pentapeptide repeat protein;pseudo=true;transl_table=11
JAGETS010000043.1	Genbank	gene	3818	4090	.	-	.	ID=gene-J4731_18255;Name=J4731_18255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_18255
JAGETS010000043.1	GeneMarkS-2+	CDS	3818	4090	.	-	0	ID=cds-MBO1929498.1;Parent=gene-J4731_18255;Dbxref=NCBI_GP:MBO1929498.1;Name=MBO1929498.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_18255;product=hypothetical protein;protein_id=MBO1929498.1;transl_table=11
JAGETS010000043.1	Genbank	gene	4160	4297	.	-	.	ID=gene-J4731_18260;Name=J4731_18260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_18260
JAGETS010000043.1	GeneMarkS-2+	CDS	4160	4297	.	-	0	ID=cds-MBO1929499.1;Parent=gene-J4731_18260;Dbxref=NCBI_GP:MBO1929499.1;Name=MBO1929499.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_18260;product=hypothetical protein;protein_id=MBO1929499.1;transl_table=11
##sequence-region JAGETS010000044.1 1 4129
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=587
JAGETS010000044.1	Genbank	region	1	4129	.	+	.	ID=JAGETS010000044.1:1..4129;Dbxref=taxon:587;collected-by=NHLS;collection-date=2018;country=South Africa: Pretoria;gbkey=Src;isolation-source=stool;lat-lon=25.7479 S 28.2293 E;mol_type=genomic DNA;nat-host=porcine;strain=SG003
JAGETS010000044.1	Genbank	pseudogene	373	1014	.	-	.	ID=gene-J4731_18265;Name=J4731_18265;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_18265;pseudo=true
JAGETS010000044.1	Protein Homology	CDS	373	1014	.	-	0	ID=cds-J4731_18265;Parent=gene-J4731_18265;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_032495680.1;locus_tag=J4731_18265;product=QnrD family quinolone resistance pentapeptide repeat protein;pseudo=true;transl_table=11
JAGETS010000044.1	Genbank	gene	1257	1694	.	-	.	ID=gene-J4731_18270;Name=J4731_18270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_18270
JAGETS010000044.1	GeneMarkS-2+	CDS	1257	1694	.	-	0	ID=cds-MBO1929500.1;Parent=gene-J4731_18270;Dbxref=NCBI_GP:MBO1929500.1;Name=MBO1929500.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_18270;product=hypothetical protein;protein_id=MBO1929500.1;transl_table=11
JAGETS010000044.1	Genbank	gene	1963	2199	.	-	.	ID=gene-J4731_18275;Name=J4731_18275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_18275
JAGETS010000044.1	GeneMarkS-2+	CDS	1963	2199	.	-	0	ID=cds-MBO1929501.1;Parent=gene-J4731_18275;Dbxref=NCBI_GP:MBO1929501.1;Name=MBO1929501.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_18275;product=hypothetical protein;protein_id=MBO1929501.1;transl_table=11
JAGETS010000044.1	Genbank	gene	2196	2402	.	-	.	ID=gene-J4731_18280;Name=J4731_18280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_18280
JAGETS010000044.1	GeneMarkS-2+	CDS	2196	2402	.	-	0	ID=cds-MBO1929502.1;Parent=gene-J4731_18280;Dbxref=NCBI_GP:MBO1929502.1;Name=MBO1929502.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_18280;product=hypothetical protein;protein_id=MBO1929502.1;transl_table=11
JAGETS010000044.1	Genbank	pseudogene	3037	3637	.	-	.	ID=gene-J4731_18285;Name=J4731_18285;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_18285;pseudo=true
JAGETS010000044.1	Protein Homology	CDS	3037	3637	.	-	0	ID=cds-J4731_18285;Parent=gene-J4731_18285;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004943345.1;locus_tag=J4731_18285;product=QnrD family quinolone resistance pentapeptide repeat protein;pseudo=true;transl_table=11
JAGETS010000044.1	Genbank	gene	3875	4129	.	-	.	ID=gene-J4731_18290;Name=J4731_18290;end_range=4129,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_18290;partial=true
JAGETS010000044.1	GeneMarkS-2+	CDS	3875	4129	.	-	0	ID=cds-MBO1929503.1;Parent=gene-J4731_18290;Dbxref=NCBI_GP:MBO1929503.1;Name=MBO1929503.1;end_range=4129,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_18290;partial=true;product=hypothetical protein;protein_id=MBO1929503.1;transl_table=11
##sequence-region JAGETS010000045.1 1 4935
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=587
JAGETS010000045.1	Genbank	region	1	4935	.	+	.	ID=JAGETS010000045.1:1..4935;Dbxref=taxon:587;collected-by=NHLS;collection-date=2018;country=South Africa: Pretoria;gbkey=Src;isolation-source=stool;lat-lon=25.7479 S 28.2293 E;mol_type=genomic DNA;nat-host=porcine;strain=SG003
JAGETS010000045.1	Genbank	gene	102	239	.	-	.	ID=gene-J4731_18295;Name=J4731_18295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_18295
JAGETS010000045.1	GeneMarkS-2+	CDS	102	239	.	-	0	ID=cds-MBO1929504.1;Parent=gene-J4731_18295;Dbxref=NCBI_GP:MBO1929504.1;Name=MBO1929504.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_18295;product=hypothetical protein;protein_id=MBO1929504.1;transl_table=11
JAGETS010000045.1	Genbank	gene	563	736	.	-	.	ID=gene-J4731_18300;Name=J4731_18300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_18300
JAGETS010000045.1	GeneMarkS-2+	CDS	563	736	.	-	0	ID=cds-MBO1929505.1;Parent=gene-J4731_18300;Dbxref=NCBI_GP:MBO1929505.1;Name=MBO1929505.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_18300;product=hypothetical protein;protein_id=MBO1929505.1;transl_table=11
JAGETS010000045.1	Genbank	gene	771	938	.	-	.	ID=gene-J4731_18305;Name=J4731_18305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_18305
JAGETS010000045.1	GeneMarkS-2+	CDS	771	938	.	-	0	ID=cds-MBO1929506.1;Parent=gene-J4731_18305;Dbxref=NCBI_GP:MBO1929506.1;Name=MBO1929506.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_18305;product=hypothetical protein;protein_id=MBO1929506.1;transl_table=11
JAGETS010000045.1	Genbank	pseudogene	1569	2211	.	-	.	ID=gene-J4731_18310;Name=J4731_18310;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_18310;pseudo=true
JAGETS010000045.1	Protein Homology	CDS	1569	2211	.	-	0	ID=cds-J4731_18310;Parent=gene-J4731_18310;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_032495680.1;locus_tag=J4731_18310;product=QnrD family quinolone resistance pentapeptide repeat protein;pseudo=true;transl_table=11
JAGETS010000045.1	Genbank	gene	2408	2887	.	-	.	ID=gene-J4731_18315;Name=J4731_18315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_18315
JAGETS010000045.1	GeneMarkS-2+	CDS	2408	2887	.	-	0	ID=cds-MBO1929507.1;Parent=gene-J4731_18315;Dbxref=NCBI_GP:MBO1929507.1;Name=MBO1929507.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_18315;product=hypothetical protein;protein_id=MBO1929507.1;transl_table=11
JAGETS010000045.1	Genbank	gene	3154	3375	.	-	.	ID=gene-J4731_18320;Name=J4731_18320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_18320
JAGETS010000045.1	GeneMarkS-2+	CDS	3154	3375	.	-	0	ID=cds-MBO1929508.1;Parent=gene-J4731_18320;Dbxref=NCBI_GP:MBO1929508.1;Name=MBO1929508.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_18320;product=hypothetical protein;protein_id=MBO1929508.1;transl_table=11
JAGETS010000045.1	Genbank	gene	3424	3591	.	-	.	ID=gene-J4731_18325;Name=J4731_18325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_18325
JAGETS010000045.1	GeneMarkS-2+	CDS	3424	3591	.	-	0	ID=cds-MBO1929509.1;Parent=gene-J4731_18325;Dbxref=NCBI_GP:MBO1929509.1;Name=MBO1929509.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_18325;product=hypothetical protein;protein_id=MBO1929509.1;transl_table=11
JAGETS010000045.1	Genbank	pseudogene	4217	4851	.	-	.	ID=gene-J4731_18330;Name=J4731_18330;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_18330;pseudo=true
JAGETS010000045.1	Protein Homology	CDS	4217	4851	.	-	0	ID=cds-J4731_18330;Parent=gene-J4731_18330;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012006481.1;locus_tag=J4731_18330;product=QnrD family quinolone resistance pentapeptide repeat protein;pseudo=true;transl_table=11
##sequence-region JAGETS010000046.1 1 5270
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=587
JAGETS010000046.1	Genbank	region	1	5270	.	+	.	ID=JAGETS010000046.1:1..5270;Dbxref=taxon:587;collected-by=NHLS;collection-date=2018;country=South Africa: Pretoria;gbkey=Src;isolation-source=stool;lat-lon=25.7479 S 28.2293 E;mol_type=genomic DNA;nat-host=porcine;strain=SG003
JAGETS010000046.1	Genbank	gene	405	626	.	-	.	ID=gene-J4731_18335;Name=J4731_18335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_18335
JAGETS010000046.1	GeneMarkS-2+	CDS	405	626	.	-	0	ID=cds-MBO1929510.1;Parent=gene-J4731_18335;Dbxref=NCBI_GP:MBO1929510.1;Name=MBO1929510.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_18335;product=hypothetical protein;protein_id=MBO1929510.1;transl_table=11
JAGETS010000046.1	Genbank	gene	675	842	.	-	.	ID=gene-J4731_18340;Name=J4731_18340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_18340
JAGETS010000046.1	GeneMarkS-2+	CDS	675	842	.	-	0	ID=cds-MBO1929511.1;Parent=gene-J4731_18340;Dbxref=NCBI_GP:MBO1929511.1;Name=MBO1929511.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_18340;product=hypothetical protein;protein_id=MBO1929511.1;transl_table=11
JAGETS010000046.1	Genbank	pseudogene	1470	2113	.	-	.	ID=gene-J4731_18345;Name=J4731_18345;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_18345;pseudo=true
JAGETS010000046.1	Protein Homology	CDS	1470	2113	.	-	0	ID=cds-J4731_18345;Parent=gene-J4731_18345;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_032495680.1;locus_tag=J4731_18345;product=QnrD family quinolone resistance pentapeptide repeat protein;pseudo=true;transl_table=11
JAGETS010000046.1	Genbank	gene	2310	2543	.	-	.	ID=gene-J4731_18350;Name=J4731_18350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_18350
JAGETS010000046.1	GeneMarkS-2+	CDS	2310	2543	.	-	0	ID=cds-MBO1929512.1;Parent=gene-J4731_18350;Dbxref=NCBI_GP:MBO1929512.1;Name=MBO1929512.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_18350;product=hypothetical protein;protein_id=MBO1929512.1;transl_table=11
JAGETS010000046.1	Genbank	gene	2642	2782	.	-	.	ID=gene-J4731_18355;Name=J4731_18355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_18355
JAGETS010000046.1	GeneMarkS-2+	CDS	2642	2782	.	-	0	ID=cds-MBO1929513.1;Parent=gene-J4731_18355;Dbxref=NCBI_GP:MBO1929513.1;Name=MBO1929513.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_18355;product=hypothetical protein;protein_id=MBO1929513.1;transl_table=11
JAGETS010000046.1	Genbank	gene	3047	3268	.	-	.	ID=gene-J4731_18360;Name=J4731_18360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_18360
JAGETS010000046.1	GeneMarkS-2+	CDS	3047	3268	.	-	0	ID=cds-MBO1929514.1;Parent=gene-J4731_18360;Dbxref=NCBI_GP:MBO1929514.1;Name=MBO1929514.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_18360;product=hypothetical protein;protein_id=MBO1929514.1;transl_table=11
JAGETS010000046.1	Genbank	gene	3317	3484	.	-	.	ID=gene-J4731_18365;Name=J4731_18365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_18365
JAGETS010000046.1	GeneMarkS-2+	CDS	3317	3484	.	-	0	ID=cds-MBO1929515.1;Parent=gene-J4731_18365;Dbxref=NCBI_GP:MBO1929515.1;Name=MBO1929515.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_18365;product=hypothetical protein;protein_id=MBO1929515.1;transl_table=11
JAGETS010000046.1	Genbank	pseudogene	4118	4754	.	-	.	ID=gene-J4731_18370;Name=J4731_18370;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_18370;pseudo=true
JAGETS010000046.1	Protein Homology	CDS	4118	4754	.	-	0	ID=cds-J4731_18370;Parent=gene-J4731_18370;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004943345.1;locus_tag=J4731_18370;product=QnrD family quinolone resistance pentapeptide repeat protein;pseudo=true;transl_table=11
JAGETS010000046.1	Genbank	gene	4925	5270	.	-	.	ID=gene-J4731_18375;Name=J4731_18375;end_range=5270,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_18375;partial=true
JAGETS010000046.1	GeneMarkS-2+	CDS	4925	5270	.	-	1	ID=cds-MBO1929516.1;Parent=gene-J4731_18375;Dbxref=NCBI_GP:MBO1929516.1;Name=MBO1929516.1;end_range=5270,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_18375;partial=true;product=hypothetical protein;protein_id=MBO1929516.1;transl_table=11
##sequence-region JAGETS010000047.1 1 3481
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=587
JAGETS010000047.1	Genbank	region	1	3481	.	+	.	ID=JAGETS010000047.1:1..3481;Dbxref=taxon:587;collected-by=NHLS;collection-date=2018;country=South Africa: Pretoria;gbkey=Src;isolation-source=stool;lat-lon=25.7479 S 28.2293 E;mol_type=genomic DNA;nat-host=porcine;strain=SG003
JAGETS010000047.1	Genbank	gene	364	639	.	-	.	ID=gene-J4731_18380;Name=J4731_18380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_18380
JAGETS010000047.1	GeneMarkS-2+	CDS	364	639	.	-	0	ID=cds-MBO1929517.1;Parent=gene-J4731_18380;Dbxref=NCBI_GP:MBO1929517.1;Name=MBO1929517.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_18380;product=hypothetical protein;protein_id=MBO1929517.1;transl_table=11
JAGETS010000047.1	Genbank	gene	947	1123	.	-	.	ID=gene-J4731_18385;Name=J4731_18385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_18385
JAGETS010000047.1	GeneMarkS-2+	CDS	947	1123	.	-	0	ID=cds-MBO1929518.1;Parent=gene-J4731_18385;Dbxref=NCBI_GP:MBO1929518.1;Name=MBO1929518.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_18385;product=hypothetical protein;protein_id=MBO1929518.1;transl_table=11
JAGETS010000047.1	Genbank	gene	1172	1339	.	-	.	ID=gene-J4731_18390;Name=J4731_18390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_18390
JAGETS010000047.1	GeneMarkS-2+	CDS	1172	1339	.	-	0	ID=cds-MBO1929519.1;Parent=gene-J4731_18390;Dbxref=NCBI_GP:MBO1929519.1;Name=MBO1929519.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_18390;product=hypothetical protein;protein_id=MBO1929519.1;transl_table=11
JAGETS010000047.1	Genbank	gene	1798	1935	.	+	.	ID=gene-J4731_18395;Name=J4731_18395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_18395
JAGETS010000047.1	GeneMarkS-2+	CDS	1798	1935	.	+	0	ID=cds-MBO1929520.1;Parent=gene-J4731_18395;Dbxref=NCBI_GP:MBO1929520.1;Name=MBO1929520.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_18395;product=hypothetical protein;protein_id=MBO1929520.1;transl_table=11
JAGETS010000047.1	Genbank	pseudogene	1970	2569	.	-	.	ID=gene-J4731_18400;Name=J4731_18400;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_18400;pseudo=true
JAGETS010000047.1	Protein Homology	CDS	1970	2569	.	-	0	ID=cds-J4731_18400;Parent=gene-J4731_18400;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004943345.1;locus_tag=J4731_18400;product=QnrD family quinolone resistance pentapeptide repeat protein;pseudo=true;transl_table=11
JAGETS010000047.1	Genbank	gene	2803	3012	.	-	.	ID=gene-J4731_18405;Name=J4731_18405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_18405
JAGETS010000047.1	GeneMarkS-2+	CDS	2803	3012	.	-	0	ID=cds-MBO1929521.1;Parent=gene-J4731_18405;Dbxref=NCBI_GP:MBO1929521.1;Name=MBO1929521.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_18405;product=hypothetical protein;protein_id=MBO1929521.1;transl_table=11
##sequence-region JAGETS010000048.1 1 5433
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=587
JAGETS010000048.1	Genbank	region	1	5433	.	+	.	ID=JAGETS010000048.1:1..5433;Dbxref=taxon:587;collected-by=NHLS;collection-date=2018;country=South Africa: Pretoria;gbkey=Src;isolation-source=stool;lat-lon=25.7479 S 28.2293 E;mol_type=genomic DNA;nat-host=porcine;strain=SG003
JAGETS010000048.1	Genbank	pseudogene	56	698	.	-	.	ID=gene-J4731_18410;Name=J4731_18410;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_18410;pseudo=true
JAGETS010000048.1	Protein Homology	CDS	56	698	.	-	0	ID=cds-J4731_18410;Parent=gene-J4731_18410;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_032495680.1;locus_tag=J4731_18410;product=QnrD family quinolone resistance pentapeptide repeat protein;pseudo=true;transl_table=11
JAGETS010000048.1	Genbank	gene	895	1116	.	-	.	ID=gene-J4731_18415;Name=J4731_18415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_18415
JAGETS010000048.1	GeneMarkS-2+	CDS	895	1116	.	-	0	ID=cds-MBO1929522.1;Parent=gene-J4731_18415;Dbxref=NCBI_GP:MBO1929522.1;Name=MBO1929522.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_18415;product=hypothetical protein;protein_id=MBO1929522.1;transl_table=11
JAGETS010000048.1	Genbank	gene	1174	1371	.	-	.	ID=gene-J4731_18420;Name=J4731_18420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_18420
JAGETS010000048.1	GeneMarkS-2+	CDS	1174	1371	.	-	0	ID=cds-MBO1929523.1;Parent=gene-J4731_18420;Dbxref=NCBI_GP:MBO1929523.1;Name=MBO1929523.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_18420;product=hypothetical protein;protein_id=MBO1929523.1;transl_table=11
JAGETS010000048.1	Genbank	gene	1684	1875	.	-	.	ID=gene-J4731_18425;Name=J4731_18425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_18425
JAGETS010000048.1	GeneMarkS-2+	CDS	1684	1875	.	-	0	ID=cds-MBO1929524.1;Parent=gene-J4731_18425;Dbxref=NCBI_GP:MBO1929524.1;Name=MBO1929524.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_18425;product=hypothetical protein;protein_id=MBO1929524.1;transl_table=11
JAGETS010000048.1	Genbank	gene	1910	2077	.	-	.	ID=gene-J4731_18430;Name=J4731_18430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_18430
JAGETS010000048.1	GeneMarkS-2+	CDS	1910	2077	.	-	0	ID=cds-MBO1929525.1;Parent=gene-J4731_18430;Dbxref=NCBI_GP:MBO1929525.1;Name=MBO1929525.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_18430;product=hypothetical protein;protein_id=MBO1929525.1;transl_table=11
JAGETS010000048.1	Genbank	pseudogene	2710	3352	.	-	.	ID=gene-J4731_18435;Name=J4731_18435;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_18435;pseudo=true
JAGETS010000048.1	Protein Homology	CDS	2710	3352	.	-	0	ID=cds-J4731_18435;Parent=gene-J4731_18435;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_032495680.1;locus_tag=J4731_18435;product=QnrD family quinolone resistance pentapeptide repeat protein;pseudo=true;transl_table=11
JAGETS010000048.1	Genbank	gene	3527	3853	.	-	.	ID=gene-J4731_18440;Name=J4731_18440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_18440
JAGETS010000048.1	GeneMarkS-2+	CDS	3527	3853	.	-	0	ID=cds-MBO1929526.1;Parent=gene-J4731_18440;Dbxref=NCBI_GP:MBO1929526.1;Name=MBO1929526.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_18440;product=hypothetical protein;protein_id=MBO1929526.1;transl_table=11
JAGETS010000048.1	Genbank	gene	3828	4028	.	-	.	ID=gene-J4731_18445;Name=J4731_18445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_18445
JAGETS010000048.1	GeneMarkS-2+	CDS	3828	4028	.	-	0	ID=cds-MBO1929527.1;Parent=gene-J4731_18445;Dbxref=NCBI_GP:MBO1929527.1;Name=MBO1929527.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_18445;product=hypothetical protein;protein_id=MBO1929527.1;transl_table=11
JAGETS010000048.1	Genbank	gene	4341	4532	.	-	.	ID=gene-J4731_18450;Name=J4731_18450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_18450
JAGETS010000048.1	GeneMarkS-2+	CDS	4341	4532	.	-	0	ID=cds-MBO1929528.1;Parent=gene-J4731_18450;Dbxref=NCBI_GP:MBO1929528.1;Name=MBO1929528.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_18450;product=hypothetical protein;protein_id=MBO1929528.1;transl_table=11
JAGETS010000048.1	Genbank	gene	4529	4735	.	-	.	ID=gene-J4731_18455;Name=J4731_18455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_18455
JAGETS010000048.1	GeneMarkS-2+	CDS	4529	4735	.	-	0	ID=cds-MBO1929529.1;Parent=gene-J4731_18455;Dbxref=NCBI_GP:MBO1929529.1;Name=MBO1929529.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_18455;product=hypothetical protein;protein_id=MBO1929529.1;transl_table=11
JAGETS010000048.1	Genbank	pseudogene	5313	5433	.	-	.	ID=gene-J4731_18460;Name=J4731_18460;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_18460;pseudo=true
JAGETS010000048.1	Protein Homology	CDS	5313	5433	.	-	2	ID=cds-J4731_18460;Parent=gene-J4731_18460;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_032495680.1;locus_tag=J4731_18460;product=QnrD family quinolone resistance pentapeptide repeat protein;pseudo=true;transl_table=11
##sequence-region JAGETS010000049.1 1 5209
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=587
JAGETS010000049.1	Genbank	region	1	5209	.	+	.	ID=JAGETS010000049.1:1..5209;Dbxref=taxon:587;collected-by=NHLS;collection-date=2018;country=South Africa: Pretoria;gbkey=Src;isolation-source=stool;lat-lon=25.7479 S 28.2293 E;mol_type=genomic DNA;nat-host=porcine;strain=SG003
JAGETS010000049.1	Genbank	pseudogene	1	594	.	-	.	ID=gene-J4731_18465;Name=J4731_18465;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_18465;pseudo=true
JAGETS010000049.1	Protein Homology	CDS	1	594	.	-	0	ID=cds-J4731_18465;Parent=gene-J4731_18465;Note=frameshifted%3B incomplete%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_032495680.1;locus_tag=J4731_18465;product=QnrD family quinolone resistance pentapeptide repeat protein;pseudo=true;transl_table=11
JAGETS010000049.1	Genbank	gene	769	1086	.	-	.	ID=gene-J4731_18470;Name=J4731_18470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_18470
JAGETS010000049.1	GeneMarkS-2+	CDS	769	1086	.	-	0	ID=cds-MBO1929530.1;Parent=gene-J4731_18470;Dbxref=NCBI_GP:MBO1929530.1;Name=MBO1929530.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_18470;product=hypothetical protein;protein_id=MBO1929530.1;transl_table=11
JAGETS010000049.1	Genbank	gene	1577	1753	.	-	.	ID=gene-J4731_18475;Name=J4731_18475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_18475
JAGETS010000049.1	GeneMarkS-2+	CDS	1577	1753	.	-	0	ID=cds-MBO1929531.1;Parent=gene-J4731_18475;Dbxref=NCBI_GP:MBO1929531.1;Name=MBO1929531.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_18475;product=hypothetical protein;protein_id=MBO1929531.1;transl_table=11
JAGETS010000049.1	Genbank	gene	1802	1969	.	-	.	ID=gene-J4731_18480;Name=J4731_18480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_18480
JAGETS010000049.1	GeneMarkS-2+	CDS	1802	1969	.	-	0	ID=cds-MBO1929532.1;Parent=gene-J4731_18480;Dbxref=NCBI_GP:MBO1929532.1;Name=MBO1929532.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_18480;product=hypothetical protein;protein_id=MBO1929532.1;transl_table=11
JAGETS010000049.1	Genbank	pseudogene	2604	3246	.	-	.	ID=gene-J4731_18485;Name=J4731_18485;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_18485;pseudo=true
JAGETS010000049.1	Protein Homology	CDS	2604	3246	.	-	0	ID=cds-J4731_18485;Parent=gene-J4731_18485;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_032495680.1;locus_tag=J4731_18485;product=QnrD family quinolone resistance pentapeptide repeat protein;pseudo=true;transl_table=11
JAGETS010000049.1	Genbank	gene	3537	3908	.	-	.	ID=gene-J4731_18490;Name=J4731_18490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_18490
JAGETS010000049.1	GeneMarkS-2+	CDS	3537	3908	.	-	0	ID=cds-MBO1929533.1;Parent=gene-J4731_18490;Dbxref=NCBI_GP:MBO1929533.1;Name=MBO1929533.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_18490;product=hypothetical protein;protein_id=MBO1929533.1;transl_table=11
JAGETS010000049.1	Genbank	gene	4221	4409	.	-	.	ID=gene-J4731_18495;Name=J4731_18495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_18495
JAGETS010000049.1	GeneMarkS-2+	CDS	4221	4409	.	-	0	ID=cds-MBO1929534.1;Parent=gene-J4731_18495;Dbxref=NCBI_GP:MBO1929534.1;Name=MBO1929534.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_18495;product=hypothetical protein;protein_id=MBO1929534.1;transl_table=11
JAGETS010000049.1	Genbank	gene	4406	4612	.	-	.	ID=gene-J4731_18500;Name=J4731_18500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_18500
JAGETS010000049.1	GeneMarkS-2+	CDS	4406	4612	.	-	0	ID=cds-MBO1929535.1;Parent=gene-J4731_18500;Dbxref=NCBI_GP:MBO1929535.1;Name=MBO1929535.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_18500;product=hypothetical protein;protein_id=MBO1929535.1;transl_table=11
JAGETS010000049.1	Genbank	gene	5025	5209	.	-	.	ID=gene-J4731_18505;Name=J4731_18505;end_range=5209,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_18505;partial=true
JAGETS010000049.1	GeneMarkS-2+	CDS	5025	5209	.	-	2	ID=cds-MBO1929536.1;Parent=gene-J4731_18505;Dbxref=NCBI_GP:MBO1929536.1;Name=MBO1929536.1;end_range=5209,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_18505;partial=true;product=hypothetical protein;protein_id=MBO1929536.1;transl_table=11
##sequence-region JAGETS010000005.1 1 32770
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=587
JAGETS010000005.1	Genbank	region	1	32770	.	+	.	ID=JAGETS010000005.1:1..32770;Dbxref=taxon:587;collected-by=NHLS;collection-date=2018;country=South Africa: Pretoria;gbkey=Src;isolation-source=stool;lat-lon=25.7479 S 28.2293 E;mol_type=genomic DNA;nat-host=porcine;strain=SG003
JAGETS010000005.1	Genbank	pseudogene	358	1510	.	+	.	ID=gene-J4731_01600;Name=J4731_01600;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_01600;pseudo=true
JAGETS010000005.1	Protein Homology	CDS	358	1510	.	+	0	ID=cds-J4731_01600;Parent=gene-J4731_01600;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004258885.1;locus_tag=J4731_01600;product=N-acetylneuraminate epimerase;pseudo=true;transl_table=11
JAGETS010000005.1	Genbank	pseudogene	1593	2174	.	+	.	ID=gene-J4731_01605;Name=J4731_01605;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_01605;pseudo=true
JAGETS010000005.1	Protein Homology	CDS	1593	2174	.	+	0	ID=cds-J4731_01605;Parent=gene-J4731_01605;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001691528.1;locus_tag=J4731_01605;product=hypothetical protein;pseudo=true;transl_table=11
JAGETS010000005.1	Genbank	gene	2167	2409	.	+	.	ID=gene-J4731_01610;Name=J4731_01610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_01610
JAGETS010000005.1	Protein Homology	CDS	2167	2409	.	+	0	ID=cds-MBO1928623.1;Parent=gene-J4731_01610;Dbxref=NCBI_GP:MBO1928623.1;Name=MBO1928623.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017942.1;locus_tag=J4731_01610;product=hypothetical protein;protein_id=MBO1928623.1;transl_table=11
JAGETS010000005.1	Genbank	pseudogene	2474	3171	.	+	.	ID=gene-J4731_01615;Name=J4731_01615;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_01615;pseudo=true
JAGETS010000005.1	Protein Homology	CDS	2474	3171	.	+	0	ID=cds-J4731_01615;Parent=gene-J4731_01615;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012368574.1;locus_tag=J4731_01615;product=N-acetylmannosamine-6-phosphate 2-epimerase;pseudo=true;transl_table=11
JAGETS010000005.1	Genbank	pseudogene	3168	4034	.	+	.	ID=gene-J4731_01620;Name=J4731_01620;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_01620;pseudo=true
JAGETS010000005.1	Protein Homology	CDS	3168	4034	.	+	0	ID=cds-J4731_01620;Parent=gene-J4731_01620;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004237806.1;locus_tag=J4731_01620;product=N-acetylmannosamine kinase;pseudo=true;transl_table=11
JAGETS010000005.1	Genbank	gene	4084	4305	.	+	.	ID=gene-J4731_01625;Name=J4731_01625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_01625
JAGETS010000005.1	GeneMarkS-2+	CDS	4084	4305	.	+	0	ID=cds-MBO1928624.1;Parent=gene-J4731_01625;Dbxref=NCBI_GP:MBO1928624.1;Name=MBO1928624.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_01625;product=hypothetical protein;protein_id=MBO1928624.1;transl_table=11
JAGETS010000005.1	Genbank	pseudogene	4466	5572	.	+	.	ID=gene-J4731_01630;Name=J4731_01630;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_01630;pseudo=true
JAGETS010000005.1	Protein Homology	CDS	4466	5572	.	+	0	ID=cds-J4731_01630;Parent=gene-J4731_01630;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001722632.1;locus_tag=J4731_01630;product=acetylneuraminate ABC transporter;pseudo=true;transl_table=11
JAGETS010000005.1	Genbank	pseudogene	5582	6051	.	+	.	ID=gene-J4731_01635;Name=J4731_01635;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_01635;pseudo=true
JAGETS010000005.1	Protein Homology	CDS	5582	6051	.	+	0	ID=cds-J4731_01635;Parent=gene-J4731_01635;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004258903.1;locus_tag=J4731_01635;product=YhcH/YjgK/YiaL family protein;pseudo=true;transl_table=11
JAGETS010000005.1	Genbank	pseudogene	6241	7150	.	+	.	ID=gene-J4731_01640;Name=J4731_01640;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_01640;pseudo=true
JAGETS010000005.1	Protein Homology	CDS	6241	7150	.	+	0	ID=cds-J4731_01640;Parent=gene-J4731_01640;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004107217.1;locus_tag=J4731_01640;product=MurR/RpiR family transcriptional regulator;pseudo=true;transl_table=11
JAGETS010000005.1	Genbank	pseudogene	7265	8180	.	+	.	ID=gene-J4731_01645;Name=J4731_01645;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_01645;pseudo=true
JAGETS010000005.1	Protein Homology	CDS	7265	8180	.	+	0	ID=cds-J4731_01645;Parent=gene-J4731_01645;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012847793.1;locus_tag=J4731_01645;product=dihydrodipicolinate synthase family protein;pseudo=true;transl_table=11
JAGETS010000005.1	Genbank	pseudogene	8402	9057	.	-	.	ID=gene-J4731_01650;Name=J4731_01650;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_01650;pseudo=true
JAGETS010000005.1	Protein Homology	CDS	8402	9057	.	-	0	ID=cds-J4731_01650;Parent=gene-J4731_01650;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004242528.1;locus_tag=J4731_01650;product=class I SAM-dependent methyltransferase;pseudo=true;transl_table=11
JAGETS010000005.1	Genbank	gene	9741	10025	.	-	.	ID=gene-J4731_01655;Name=J4731_01655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_01655
JAGETS010000005.1	GeneMarkS-2+	CDS	9741	10025	.	-	0	ID=cds-MBO1928625.1;Parent=gene-J4731_01655;Dbxref=NCBI_GP:MBO1928625.1;Name=MBO1928625.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_01655;product=hypothetical protein;protein_id=MBO1928625.1;transl_table=11
JAGETS010000005.1	Genbank	pseudogene	11206	11573	.	+	.	ID=gene-J4731_01660;Name=J4731_01660;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_01660;pseudo=true
JAGETS010000005.1	Protein Homology	CDS	11206	11573	.	+	0	ID=cds-J4731_01660;Parent=gene-J4731_01660;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006661219.1;locus_tag=J4731_01660;product=helix-turn-helix transcriptional regulator;pseudo=true;transl_table=11
JAGETS010000005.1	Genbank	pseudogene	11664	14828	.	+	.	ID=gene-J4731_01665;Name=J4731_01665;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_01665;pseudo=true
JAGETS010000005.1	Protein Homology	CDS	11664	14828	.	+	0	ID=cds-J4731_01665;Parent=gene-J4731_01665;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006661220.1;locus_tag=J4731_01665;product=response regulator;pseudo=true;transl_table=11
JAGETS010000005.1	Genbank	gene	14825	15436	.	-	.	ID=gene-J4731_01670;Name=J4731_01670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_01670
JAGETS010000005.1	Protein Homology	CDS	14825	15436	.	-	0	ID=cds-MBO1928626.1;Parent=gene-J4731_01670;Dbxref=NCBI_GP:MBO1928626.1;Name=MBO1928626.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004258940.1;locus_tag=J4731_01670;product=response regulator transcription factor;protein_id=MBO1928626.1;transl_table=11
JAGETS010000005.1	Genbank	pseudogene	15543	16528	.	-	.	ID=gene-J4731_01675;Name=J4731_01675;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_01675;pseudo=true
JAGETS010000005.1	Protein Homology	CDS	15543	16528	.	-	0	ID=cds-J4731_01675;Parent=gene-J4731_01675;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004258944.1;locus_tag=J4731_01675;product=fimbrial protein;pseudo=true;transl_table=11
JAGETS010000005.1	Genbank	pseudogene	16525	17254	.	-	.	ID=gene-J4731_01680;Name=J4731_01680;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_01680;pseudo=true
JAGETS010000005.1	Protein Homology	CDS	16525	17254	.	-	0	ID=cds-J4731_01680;Parent=gene-J4731_01680;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004258949.1;locus_tag=J4731_01680;product=molecular chaperone;pseudo=true;transl_table=11
JAGETS010000005.1	Genbank	pseudogene	17251	19720	.	-	.	ID=gene-J4731_01685;Name=J4731_01685;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_01685;pseudo=true
JAGETS010000005.1	Protein Homology	CDS	17251	19720	.	-	0	ID=cds-J4731_01685;Parent=gene-J4731_01685;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004258952.1;locus_tag=J4731_01685;product=fimbrial biogenesis outer membrane usher protein;pseudo=true;transl_table=11
JAGETS010000005.1	Genbank	pseudogene	19841	20372	.	-	.	ID=gene-J4731_01690;Name=J4731_01690;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_01690;pseudo=true
JAGETS010000005.1	Protein Homology	CDS	19841	20372	.	-	0	ID=cds-J4731_01690;Parent=gene-J4731_01690;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004258955.1;locus_tag=J4731_01690;product=type 1 fimbrial protein;pseudo=true;transl_table=11
JAGETS010000005.1	Genbank	gene	20581	20886	.	-	.	ID=gene-J4731_01695;Name=J4731_01695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_01695
JAGETS010000005.1	Protein Homology	CDS	20581	20886	.	-	0	ID=cds-MBO1928627.1;Parent=gene-J4731_01695;Dbxref=NCBI_GP:MBO1928627.1;Name=MBO1928627.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006661226.1;locus_tag=J4731_01695;product=helix-turn-helix transcriptional regulator;protein_id=MBO1928627.1;transl_table=11
JAGETS010000005.1	Genbank	pseudogene	22551	23077	.	+	.	ID=gene-J4731_01700;Name=J4731_01700;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_01700;pseudo=true
JAGETS010000005.1	Protein Homology	CDS	22551	23077	.	+	0	ID=cds-J4731_01700;Parent=gene-J4731_01700;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004258966.1;locus_tag=J4731_01700;product=fimbrial protein;pseudo=true;transl_table=11
JAGETS010000005.1	Genbank	gene	23332	23604	.	+	.	ID=gene-J4731_01705;Name=J4731_01705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_01705
JAGETS010000005.1	Protein Homology	CDS	23332	23604	.	+	0	ID=cds-MBO1928628.1;Parent=gene-J4731_01705;Dbxref=NCBI_GP:MBO1928628.1;Name=MBO1928628.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025320.1;locus_tag=J4731_01705;product=hypothetical protein;protein_id=MBO1928628.1;transl_table=11
JAGETS010000005.1	Genbank	gene	23570	23812	.	+	.	ID=gene-J4731_01710;Name=J4731_01710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_01710
JAGETS010000005.1	GeneMarkS-2+	CDS	23570	23812	.	+	0	ID=cds-MBO1928629.1;Parent=gene-J4731_01710;Dbxref=NCBI_GP:MBO1928629.1;Name=MBO1928629.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_01710;product=hypothetical protein;protein_id=MBO1928629.1;transl_table=11
JAGETS010000005.1	Genbank	pseudogene	23713	24048	.	+	.	ID=gene-J4731_01715;Name=J4731_01715;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_01715;pseudo=true
JAGETS010000005.1	Protein Homology	CDS	23713	24048	.	+	0	ID=cds-J4731_01715;Parent=gene-J4731_01715;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012786.1;locus_tag=J4731_01715;product=fimbria/pilus outer membrane usher protein;pseudo=true;transl_table=11
JAGETS010000005.1	Genbank	gene	24033	24260	.	+	.	ID=gene-J4731_01720;Name=J4731_01720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_01720
JAGETS010000005.1	Protein Homology	CDS	24033	24260	.	+	0	ID=cds-MBO1928630.1;Parent=gene-J4731_01720;Dbxref=NCBI_GP:MBO1928630.1;Name=MBO1928630.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012786.1;locus_tag=J4731_01720;product=fimbria/pilus outer membrane usher protein;protein_id=MBO1928630.1;transl_table=11
JAGETS010000005.1	Genbank	gene	24489	25037	.	+	.	ID=gene-J4731_01725;Name=J4731_01725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_01725
JAGETS010000005.1	Protein Homology	CDS	24489	25037	.	+	0	ID=cds-MBO1928631.1;Parent=gene-J4731_01725;Dbxref=NCBI_GP:MBO1928631.1;Name=MBO1928631.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012786.1;locus_tag=J4731_01725;product=fimbria/pilus outer membrane usher protein;protein_id=MBO1928631.1;transl_table=11
JAGETS010000005.1	Genbank	gene	25034	25618	.	+	.	ID=gene-J4731_01730;Name=J4731_01730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_01730
JAGETS010000005.1	Protein Homology	CDS	25034	25618	.	+	0	ID=cds-MBO1928632.1;Parent=gene-J4731_01730;Dbxref=NCBI_GP:MBO1928632.1;Name=MBO1928632.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012786.1%2CHMM:NF025319.1;locus_tag=J4731_01730;product=fimbrial biogenesis outer membrane usher protein;protein_id=MBO1928632.1;transl_table=11
JAGETS010000005.1	Genbank	gene	25688	25993	.	+	.	ID=gene-J4731_01735;Name=J4731_01735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_01735
JAGETS010000005.1	Protein Homology	CDS	25688	25993	.	+	0	ID=cds-MBO1928633.1;Parent=gene-J4731_01735;Dbxref=NCBI_GP:MBO1928633.1;Name=MBO1928633.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012565.1;locus_tag=J4731_01735;product=fimbria/pilus periplasmic chaperone;protein_id=MBO1928633.1;transl_table=11
JAGETS010000005.1	Genbank	gene	25914	26102	.	+	.	ID=gene-J4731_01740;Name=J4731_01740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_01740
JAGETS010000005.1	Protein Homology	CDS	25914	26102	.	+	0	ID=cds-MBO1928634.1;Parent=gene-J4731_01740;Dbxref=NCBI_GP:MBO1928634.1;Name=MBO1928634.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012565.1;locus_tag=J4731_01740;product=fimbria/pilus periplasmic chaperone;protein_id=MBO1928634.1;transl_table=11
JAGETS010000005.1	Genbank	gene	26132	26374	.	+	.	ID=gene-J4731_01745;Name=J4731_01745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_01745
JAGETS010000005.1	Protein Homology	CDS	26132	26374	.	+	0	ID=cds-MBO1928635.1;Parent=gene-J4731_01745;Dbxref=NCBI_GP:MBO1928635.1;Name=MBO1928635.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014773.1;locus_tag=J4731_01745;product=hypothetical protein;protein_id=MBO1928635.1;transl_table=11
JAGETS010000005.1	Genbank	gene	26468	26821	.	+	.	ID=gene-J4731_01750;Name=J4731_01750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_01750
JAGETS010000005.1	GeneMarkS-2+	CDS	26468	26821	.	+	0	ID=cds-MBO1928636.1;Parent=gene-J4731_01750;Dbxref=NCBI_GP:MBO1928636.1;Name=MBO1928636.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_01750;product=hypothetical protein;protein_id=MBO1928636.1;transl_table=11
JAGETS010000005.1	Genbank	gene	26835	27332	.	+	.	ID=gene-J4731_01755;Name=J4731_01755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_01755
JAGETS010000005.1	GeneMarkS-2+	CDS	26835	27332	.	+	0	ID=cds-MBO1928637.1;Parent=gene-J4731_01755;Dbxref=NCBI_GP:MBO1928637.1;Name=MBO1928637.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_01755;product=hypothetical protein;protein_id=MBO1928637.1;transl_table=11
JAGETS010000005.1	Genbank	pseudogene	27744	27976	.	+	.	ID=gene-J4731_01760;Name=J4731_01760;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_01760;pseudo=true
JAGETS010000005.1	Protein Homology	CDS	27744	27976	.	+	0	ID=cds-J4731_01760;Parent=gene-J4731_01760;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015376856.1;locus_tag=J4731_01760;product=MGMT family protein;pseudo=true;transl_table=11
JAGETS010000005.1	Genbank	pseudogene	28227	29808	.	-	.	ID=gene-J4731_01765;Name=J4731_01765;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_01765;pseudo=true
JAGETS010000005.1	Protein Homology	CDS	28227	29808	.	-	0	ID=cds-J4731_01765;Parent=gene-J4731_01765;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006534888.1;locus_tag=J4731_01765;product=AbgT family transporter;pseudo=true;transl_table=11
JAGETS010000005.1	Genbank	pseudogene	30798	31202	.	+	.	ID=gene-J4731_01770;Name=J4731_01770;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_01770;pseudo=true
JAGETS010000005.1	Protein Homology	CDS	30798	31202	.	+	0	ID=cds-J4731_01770;Parent=gene-J4731_01770;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004917310.1;locus_tag=J4731_01770;product=DUF2628 domain-containing protein;pseudo=true;transl_table=11
JAGETS010000005.1	Genbank	pseudogene	31238	31930	.	-	.	ID=gene-J4731_01775;Name=J4731_01775;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_01775;pseudo=true
JAGETS010000005.1	Protein Homology	CDS	31238	31930	.	-	0	ID=cds-J4731_01775;Parent=gene-J4731_01775;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006658513.1;locus_tag=J4731_01775;product=helix-turn-helix domain-containing protein;pseudo=true;transl_table=11
JAGETS010000005.1	Genbank	pseudogene	32011	32314	.	-	.	ID=gene-J4731_01780;Name=J4731_01780;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_01780;pseudo=true
JAGETS010000005.1	Protein Homology	CDS	32011	32314	.	-	0	ID=cds-J4731_01780;Parent=gene-J4731_01780;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016151372.1;locus_tag=J4731_01780;product=type II toxin-antitoxin system RelE/ParE family toxin;pseudo=true;transl_table=11
JAGETS010000005.1	Genbank	pseudogene	32314	32546	.	-	.	ID=gene-J4731_01785;Name=J4731_01785;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_01785;pseudo=true
JAGETS010000005.1	Protein Homology	CDS	32314	32546	.	-	0	ID=cds-J4731_01785;Parent=gene-J4731_01785;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016155179.1;locus_tag=J4731_01785;product=type II toxin-antitoxin system ParD family antitoxin;pseudo=true;transl_table=11
##sequence-region JAGETS010000050.1 1 5376
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=587
JAGETS010000050.1	Genbank	region	1	5376	.	+	.	ID=JAGETS010000050.1:1..5376;Dbxref=taxon:587;collected-by=NHLS;collection-date=2018;country=South Africa: Pretoria;gbkey=Src;isolation-source=stool;lat-lon=25.7479 S 28.2293 E;mol_type=genomic DNA;nat-host=porcine;strain=SG003
JAGETS010000050.1	Genbank	pseudogene	242	879	.	-	.	ID=gene-J4731_18510;Name=J4731_18510;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_18510;pseudo=true
JAGETS010000050.1	Protein Homology	CDS	242	879	.	-	0	ID=cds-J4731_18510;Parent=gene-J4731_18510;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_032495680.1;locus_tag=J4731_18510;product=QnrD family quinolone resistance pentapeptide repeat protein;pseudo=true;transl_table=11
JAGETS010000050.1	Genbank	gene	1174	1554	.	-	.	ID=gene-J4731_18515;Name=J4731_18515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_18515
JAGETS010000050.1	GeneMarkS-2+	CDS	1174	1554	.	-	0	ID=cds-MBO1929537.1;Parent=gene-J4731_18515;Dbxref=NCBI_GP:MBO1929537.1;Name=MBO1929537.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_18515;product=hypothetical protein;protein_id=MBO1929537.1;transl_table=11
JAGETS010000050.1	Genbank	gene	2117	2254	.	-	.	ID=gene-J4731_18520;Name=J4731_18520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_18520
JAGETS010000050.1	GeneMarkS-2+	CDS	2117	2254	.	-	0	ID=cds-MBO1929538.1;Parent=gene-J4731_18520;Dbxref=NCBI_GP:MBO1929538.1;Name=MBO1929538.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_18520;product=hypothetical protein;protein_id=MBO1929538.1;transl_table=11
JAGETS010000050.1	Genbank	pseudogene	2881	3518	.	-	.	ID=gene-J4731_18525;Name=J4731_18525;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_18525;pseudo=true
JAGETS010000050.1	Protein Homology	CDS	2881	3518	.	-	0	ID=cds-J4731_18525;Parent=gene-J4731_18525;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_032495680.1;locus_tag=J4731_18525;product=QnrD family quinolone resistance pentapeptide repeat protein;pseudo=true;transl_table=11
JAGETS010000050.1	Genbank	gene	3682	4182	.	-	.	ID=gene-J4731_18530;Name=J4731_18530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_18530
JAGETS010000050.1	GeneMarkS-2+	CDS	3682	4182	.	-	0	ID=cds-MBO1929539.1;Parent=gene-J4731_18530;Dbxref=NCBI_GP:MBO1929539.1;Name=MBO1929539.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_18530;product=hypothetical protein;protein_id=MBO1929539.1;transl_table=11
JAGETS010000050.1	Genbank	gene	4725	4883	.	-	.	ID=gene-J4731_18535;Name=J4731_18535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_18535
JAGETS010000050.1	GeneMarkS-2+	CDS	4725	4883	.	-	0	ID=cds-MBO1929540.1;Parent=gene-J4731_18535;Dbxref=NCBI_GP:MBO1929540.1;Name=MBO1929540.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_18535;product=hypothetical protein;protein_id=MBO1929540.1;transl_table=11
JAGETS010000050.1	Genbank	gene	5187	5376	.	-	.	ID=gene-J4731_18540;Name=J4731_18540;end_range=5376,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_18540;partial=true
JAGETS010000050.1	GeneMarkS-2+	CDS	5187	5376	.	-	1	ID=cds-MBO1929541.1;Parent=gene-J4731_18540;Dbxref=NCBI_GP:MBO1929541.1;Name=MBO1929541.1;end_range=5376,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_18540;partial=true;product=hypothetical protein;protein_id=MBO1929541.1;transl_table=11
##sequence-region JAGETS010000051.1 1 5234
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=587
JAGETS010000051.1	Genbank	region	1	5234	.	+	.	ID=JAGETS010000051.1:1..5234;Dbxref=taxon:587;collected-by=NHLS;collection-date=2018;country=South Africa: Pretoria;gbkey=Src;isolation-source=stool;lat-lon=25.7479 S 28.2293 E;mol_type=genomic DNA;nat-host=porcine;strain=SG003
JAGETS010000051.1	Genbank	gene	147	395	.	-	.	ID=gene-J4731_18545;Name=J4731_18545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_18545
JAGETS010000051.1	GeneMarkS-2+	CDS	147	395	.	-	0	ID=cds-MBO1929542.1;Parent=gene-J4731_18545;Dbxref=NCBI_GP:MBO1929542.1;Name=MBO1929542.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_18545;product=hypothetical protein;protein_id=MBO1929542.1;transl_table=11
JAGETS010000051.1	Genbank	gene	340	642	.	-	.	ID=gene-J4731_18550;Name=J4731_18550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_18550
JAGETS010000051.1	GeneMarkS-2+	CDS	340	642	.	-	0	ID=cds-MBO1929543.1;Parent=gene-J4731_18550;Dbxref=NCBI_GP:MBO1929543.1;Name=MBO1929543.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_18550;product=hypothetical protein;protein_id=MBO1929543.1;transl_table=11
JAGETS010000051.1	Genbank	gene	911	1147	.	-	.	ID=gene-J4731_18555;Name=J4731_18555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_18555
JAGETS010000051.1	GeneMarkS-2+	CDS	911	1147	.	-	0	ID=cds-MBO1929544.1;Parent=gene-J4731_18555;Dbxref=NCBI_GP:MBO1929544.1;Name=MBO1929544.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_18555;product=hypothetical protein;protein_id=MBO1929544.1;transl_table=11
JAGETS010000051.1	Genbank	gene	1182	1349	.	-	.	ID=gene-J4731_18560;Name=J4731_18560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_18560
JAGETS010000051.1	GeneMarkS-2+	CDS	1182	1349	.	-	0	ID=cds-MBO1929545.1;Parent=gene-J4731_18560;Dbxref=NCBI_GP:MBO1929545.1;Name=MBO1929545.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_18560;product=hypothetical protein;protein_id=MBO1929545.1;transl_table=11
JAGETS010000051.1	Genbank	pseudogene	1983	2571	.	-	.	ID=gene-J4731_18565;Name=J4731_18565;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_18565;pseudo=true
JAGETS010000051.1	Protein Homology	CDS	1983	2571	.	-	0	ID=cds-J4731_18565;Parent=gene-J4731_18565;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004943345.1;locus_tag=J4731_18565;product=QnrD family quinolone resistance pentapeptide repeat protein;pseudo=true;transl_table=11
JAGETS010000051.1	Genbank	gene	2774	3274	.	-	.	ID=gene-J4731_18570;Name=J4731_18570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_18570
JAGETS010000051.1	GeneMarkS-2+	CDS	2774	3274	.	-	0	ID=cds-MBO1929546.1;Parent=gene-J4731_18570;Dbxref=NCBI_GP:MBO1929546.1;Name=MBO1929546.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_18570;product=hypothetical protein;protein_id=MBO1929546.1;transl_table=11
JAGETS010000051.1	Genbank	gene	3759	3965	.	-	.	ID=gene-J4731_18575;Name=J4731_18575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_18575
JAGETS010000051.1	GeneMarkS-2+	CDS	3759	3965	.	-	0	ID=cds-MBO1929547.1;Parent=gene-J4731_18575;Dbxref=NCBI_GP:MBO1929547.1;Name=MBO1929547.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_18575;product=hypothetical protein;protein_id=MBO1929547.1;transl_table=11
JAGETS010000051.1	Genbank	pseudogene	4599	5225	.	-	.	ID=gene-J4731_18580;Name=J4731_18580;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_18580;pseudo=true
JAGETS010000051.1	Protein Homology	CDS	4599	5225	.	-	0	ID=cds-J4731_18580;Parent=gene-J4731_18580;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_032495680.1;locus_tag=J4731_18580;product=QnrD family quinolone resistance pentapeptide repeat protein;pseudo=true;transl_table=11
##sequence-region JAGETS010000052.1 1 3863
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=587
JAGETS010000052.1	Genbank	region	1	3863	.	+	.	ID=JAGETS010000052.1:1..3863;Dbxref=taxon:587;collected-by=NHLS;collection-date=2018;country=South Africa: Pretoria;gbkey=Src;isolation-source=stool;lat-lon=25.7479 S 28.2293 E;mol_type=genomic DNA;nat-host=porcine;strain=SG003
JAGETS010000052.1	Genbank	gene	161	394	.	-	.	ID=gene-J4731_18585;Name=J4731_18585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_18585
JAGETS010000052.1	GeneMarkS-2+	CDS	161	394	.	-	0	ID=cds-MBO1929548.1;Parent=gene-J4731_18585;Dbxref=NCBI_GP:MBO1929548.1;Name=MBO1929548.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_18585;product=hypothetical protein;protein_id=MBO1929548.1;transl_table=11
JAGETS010000052.1	Genbank	gene	944	1135	.	-	.	ID=gene-J4731_18590;Name=J4731_18590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_18590
JAGETS010000052.1	GeneMarkS-2+	CDS	944	1135	.	-	0	ID=cds-MBO1929549.1;Parent=gene-J4731_18590;Dbxref=NCBI_GP:MBO1929549.1;Name=MBO1929549.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_18590;product=hypothetical protein;protein_id=MBO1929549.1;transl_table=11
JAGETS010000052.1	Genbank	gene	1170	1337	.	-	.	ID=gene-J4731_18595;Name=J4731_18595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_18595
JAGETS010000052.1	GeneMarkS-2+	CDS	1170	1337	.	-	0	ID=cds-MBO1929550.1;Parent=gene-J4731_18595;Dbxref=NCBI_GP:MBO1929550.1;Name=MBO1929550.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_18595;product=hypothetical protein;protein_id=MBO1929550.1;transl_table=11
JAGETS010000052.1	Genbank	pseudogene	1969	2610	.	-	.	ID=gene-J4731_18600;Name=J4731_18600;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_18600;pseudo=true
JAGETS010000052.1	Protein Homology	CDS	1969	2610	.	-	0	ID=cds-J4731_18600;Parent=gene-J4731_18600;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_032495680.1;locus_tag=J4731_18600;product=QnrD family quinolone resistance pentapeptide repeat protein;pseudo=true;transl_table=11
JAGETS010000052.1	Genbank	gene	2807	3127	.	-	.	ID=gene-J4731_18605;Name=J4731_18605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_18605
JAGETS010000052.1	GeneMarkS-2+	CDS	2807	3127	.	-	0	ID=cds-MBO1929551.1;Parent=gene-J4731_18605;Dbxref=NCBI_GP:MBO1929551.1;Name=MBO1929551.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_18605;product=hypothetical protein;protein_id=MBO1929551.1;transl_table=11
##sequence-region JAGETS010000053.1 1 3528
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=587
JAGETS010000053.1	Genbank	region	1	3528	.	+	.	ID=JAGETS010000053.1:1..3528;Dbxref=taxon:587;collected-by=NHLS;collection-date=2018;country=South Africa: Pretoria;gbkey=Src;isolation-source=stool;lat-lon=25.7479 S 28.2293 E;mol_type=genomic DNA;nat-host=porcine;strain=SG003
JAGETS010000053.1	Genbank	gene	257	448	.	-	.	ID=gene-J4731_18610;Name=J4731_18610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_18610
JAGETS010000053.1	GeneMarkS-2+	CDS	257	448	.	-	0	ID=cds-MBO1929552.1;Parent=gene-J4731_18610;Dbxref=NCBI_GP:MBO1929552.1;Name=MBO1929552.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_18610;product=hypothetical protein;protein_id=MBO1929552.1;transl_table=11
JAGETS010000053.1	Genbank	gene	445	651	.	-	.	ID=gene-J4731_18615;Name=J4731_18615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_18615
JAGETS010000053.1	GeneMarkS-2+	CDS	445	651	.	-	0	ID=cds-MBO1929553.1;Parent=gene-J4731_18615;Dbxref=NCBI_GP:MBO1929553.1;Name=MBO1929553.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_18615;product=hypothetical protein;protein_id=MBO1929553.1;transl_table=11
JAGETS010000053.1	Genbank	pseudogene	1285	1926	.	-	.	ID=gene-J4731_18620;Name=J4731_18620;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_18620;pseudo=true
JAGETS010000053.1	Protein Homology	CDS	1285	1926	.	-	0	ID=cds-J4731_18620;Parent=gene-J4731_18620;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_032495680.1;locus_tag=J4731_18620;product=QnrD family quinolone resistance pentapeptide repeat protein;pseudo=true;transl_table=11
JAGETS010000053.1	Genbank	gene	2217	2606	.	-	.	ID=gene-J4731_18625;Name=J4731_18625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_18625
JAGETS010000053.1	GeneMarkS-2+	CDS	2217	2606	.	-	0	ID=cds-MBO1929554.1;Parent=gene-J4731_18625;Dbxref=NCBI_GP:MBO1929554.1;Name=MBO1929554.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_18625;product=hypothetical protein;protein_id=MBO1929554.1;transl_table=11
JAGETS010000053.1	Genbank	gene	2874	3095	.	-	.	ID=gene-J4731_18630;Name=J4731_18630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_18630
JAGETS010000053.1	GeneMarkS-2+	CDS	2874	3095	.	-	0	ID=cds-MBO1929555.1;Parent=gene-J4731_18630;Dbxref=NCBI_GP:MBO1929555.1;Name=MBO1929555.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_18630;product=hypothetical protein;protein_id=MBO1929555.1;transl_table=11
JAGETS010000053.1	Genbank	gene	3106	3249	.	-	.	ID=gene-J4731_18635;Name=J4731_18635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_18635
JAGETS010000053.1	GeneMarkS-2+	CDS	3106	3249	.	-	0	ID=cds-MBO1929556.1;Parent=gene-J4731_18635;Dbxref=NCBI_GP:MBO1929556.1;Name=MBO1929556.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_18635;product=hypothetical protein;protein_id=MBO1929556.1;transl_table=11
##sequence-region JAGETS010000054.1 1 6150
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=587
JAGETS010000054.1	Genbank	region	1	6150	.	+	.	ID=JAGETS010000054.1:1..6150;Dbxref=taxon:587;collected-by=NHLS;collection-date=2018;country=South Africa: Pretoria;gbkey=Src;isolation-source=stool;lat-lon=25.7479 S 28.2293 E;mol_type=genomic DNA;nat-host=porcine;strain=SG003
JAGETS010000054.1	Genbank	gene	110	493	.	-	.	ID=gene-J4731_18640;Name=J4731_18640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_18640
JAGETS010000054.1	GeneMarkS-2+	CDS	110	493	.	-	0	ID=cds-MBO1929557.1;Parent=gene-J4731_18640;Dbxref=NCBI_GP:MBO1929557.1;Name=MBO1929557.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_18640;product=hypothetical protein;protein_id=MBO1929557.1;transl_table=11
JAGETS010000054.1	Genbank	pseudogene	1124	1767	.	-	.	ID=gene-J4731_18645;Name=J4731_18645;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_18645;pseudo=true
JAGETS010000054.1	Protein Homology	CDS	1124	1767	.	-	0	ID=cds-J4731_18645;Parent=gene-J4731_18645;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_032495680.1;locus_tag=J4731_18645;product=QnrD family quinolone resistance pentapeptide repeat protein;pseudo=true;transl_table=11
JAGETS010000054.1	Genbank	gene	1977	2282	.	-	.	ID=gene-J4731_18650;Name=J4731_18650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_18650
JAGETS010000054.1	GeneMarkS-2+	CDS	1977	2282	.	-	0	ID=cds-MBO1929558.1;Parent=gene-J4731_18650;Dbxref=NCBI_GP:MBO1929558.1;Name=MBO1929558.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_18650;product=hypothetical protein;protein_id=MBO1929558.1;transl_table=11
JAGETS010000054.1	Genbank	gene	2392	2931	.	-	.	ID=gene-J4731_18655;Name=J4731_18655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_18655
JAGETS010000054.1	GeneMarkS-2+	CDS	2392	2931	.	-	0	ID=cds-MBO1929559.1;Parent=gene-J4731_18655;Dbxref=NCBI_GP:MBO1929559.1;Name=MBO1929559.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_18655;product=hypothetical protein;protein_id=MBO1929559.1;transl_table=11
JAGETS010000054.1	Genbank	gene	2928	3134	.	-	.	ID=gene-J4731_18660;Name=J4731_18660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_18660
JAGETS010000054.1	GeneMarkS-2+	CDS	2928	3134	.	-	0	ID=cds-MBO1929560.1;Parent=gene-J4731_18660;Dbxref=NCBI_GP:MBO1929560.1;Name=MBO1929560.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_18660;product=hypothetical protein;protein_id=MBO1929560.1;transl_table=11
JAGETS010000054.1	Genbank	pseudogene	3771	4385	.	-	.	ID=gene-J4731_18665;Name=J4731_18665;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_18665;pseudo=true
JAGETS010000054.1	Protein Homology	CDS	3771	4385	.	-	0	ID=cds-J4731_18665;Parent=gene-J4731_18665;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006663235.1;locus_tag=J4731_18665;product=QnrD family quinolone resistance pentapeptide repeat protein;pseudo=true;transl_table=11
JAGETS010000054.1	Genbank	gene	4578	4919	.	-	.	ID=gene-J4731_18670;Name=J4731_18670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_18670
JAGETS010000054.1	GeneMarkS-2+	CDS	4578	4919	.	-	0	ID=cds-MBO1929561.1;Parent=gene-J4731_18670;Dbxref=NCBI_GP:MBO1929561.1;Name=MBO1929561.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_18670;product=hypothetical protein;protein_id=MBO1929561.1;transl_table=11
JAGETS010000054.1	Genbank	gene	4882	5064	.	-	.	ID=gene-J4731_18675;Name=J4731_18675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_18675
JAGETS010000054.1	GeneMarkS-2+	CDS	4882	5064	.	-	0	ID=cds-MBO1929562.1;Parent=gene-J4731_18675;Dbxref=NCBI_GP:MBO1929562.1;Name=MBO1929562.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_18675;product=hypothetical protein;protein_id=MBO1929562.1;transl_table=11
JAGETS010000054.1	Genbank	gene	5392	5583	.	-	.	ID=gene-J4731_18680;Name=J4731_18680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_18680
JAGETS010000054.1	GeneMarkS-2+	CDS	5392	5583	.	-	0	ID=cds-MBO1929563.1;Parent=gene-J4731_18680;Dbxref=NCBI_GP:MBO1929563.1;Name=MBO1929563.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_18680;product=hypothetical protein;protein_id=MBO1929563.1;transl_table=11
##sequence-region JAGETS010000055.1 1 2984
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=587
JAGETS010000055.1	Genbank	region	1	2984	.	+	.	ID=JAGETS010000055.1:1..2984;Dbxref=taxon:587;collected-by=NHLS;collection-date=2018;country=South Africa: Pretoria;gbkey=Src;isolation-source=stool;lat-lon=25.7479 S 28.2293 E;mol_type=genomic DNA;nat-host=porcine;strain=SG003
JAGETS010000055.1	Genbank	gene	273	509	.	-	.	ID=gene-J4731_18685;Name=J4731_18685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_18685
JAGETS010000055.1	GeneMarkS-2+	CDS	273	509	.	-	0	ID=cds-MBO1929564.1;Parent=gene-J4731_18685;Dbxref=NCBI_GP:MBO1929564.1;Name=MBO1929564.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_18685;product=hypothetical protein;protein_id=MBO1929564.1;transl_table=11
JAGETS010000055.1	Genbank	gene	506	712	.	-	.	ID=gene-J4731_18690;Name=J4731_18690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_18690
JAGETS010000055.1	GeneMarkS-2+	CDS	506	712	.	-	0	ID=cds-MBO1929565.1;Parent=gene-J4731_18690;Dbxref=NCBI_GP:MBO1929565.1;Name=MBO1929565.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_18690;product=hypothetical protein;protein_id=MBO1929565.1;transl_table=11
JAGETS010000055.1	Genbank	pseudogene	1346	1946	.	-	.	ID=gene-J4731_18695;Name=J4731_18695;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_18695;pseudo=true
JAGETS010000055.1	Protein Homology	CDS	1346	1946	.	-	0	ID=cds-J4731_18695;Parent=gene-J4731_18695;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004943345.1;locus_tag=J4731_18695;product=QnrD family quinolone resistance pentapeptide repeat protein;pseudo=true;transl_table=11
JAGETS010000055.1	Genbank	gene	2184	2471	.	-	.	ID=gene-J4731_18700;Name=J4731_18700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_18700
JAGETS010000055.1	GeneMarkS-2+	CDS	2184	2471	.	-	0	ID=cds-MBO1929566.1;Parent=gene-J4731_18700;Dbxref=NCBI_GP:MBO1929566.1;Name=MBO1929566.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_18700;product=hypothetical protein;protein_id=MBO1929566.1;transl_table=11
JAGETS010000055.1	Genbank	gene	2468	2662	.	-	.	ID=gene-J4731_18705;Name=J4731_18705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_18705
JAGETS010000055.1	GeneMarkS-2+	CDS	2468	2662	.	-	0	ID=cds-MBO1929567.1;Parent=gene-J4731_18705;Dbxref=NCBI_GP:MBO1929567.1;Name=MBO1929567.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_18705;product=hypothetical protein;protein_id=MBO1929567.1;transl_table=11
JAGETS010000055.1	Genbank	gene	2659	2984	.	-	.	ID=gene-J4731_18710;Name=J4731_18710;end_range=2984,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_18710;partial=true
JAGETS010000055.1	GeneMarkS-2+	CDS	2659	2984	.	-	2	ID=cds-MBO1929568.1;Parent=gene-J4731_18710;Dbxref=NCBI_GP:MBO1929568.1;Name=MBO1929568.1;end_range=2984,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_18710;partial=true;product=hypothetical protein;protein_id=MBO1929568.1;transl_table=11
##sequence-region JAGETS010000056.1 1 2564
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=587
JAGETS010000056.1	Genbank	region	1	2564	.	+	.	ID=JAGETS010000056.1:1..2564;Dbxref=taxon:587;collected-by=NHLS;collection-date=2018;country=South Africa: Pretoria;gbkey=Src;isolation-source=stool;lat-lon=25.7479 S 28.2293 E;mol_type=genomic DNA;nat-host=porcine;strain=SG003
JAGETS010000056.1	Genbank	gene	400	591	.	-	.	ID=gene-J4731_18715;Name=J4731_18715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_18715
JAGETS010000056.1	GeneMarkS-2+	CDS	400	591	.	-	0	ID=cds-MBO1929569.1;Parent=gene-J4731_18715;Dbxref=NCBI_GP:MBO1929569.1;Name=MBO1929569.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_18715;product=hypothetical protein;protein_id=MBO1929569.1;transl_table=11
JAGETS010000056.1	Genbank	gene	626	811	.	-	.	ID=gene-J4731_18720;Name=J4731_18720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_18720
JAGETS010000056.1	GeneMarkS-2+	CDS	626	811	.	-	0	ID=cds-MBO1929570.1;Parent=gene-J4731_18720;Dbxref=NCBI_GP:MBO1929570.1;Name=MBO1929570.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_18720;product=hypothetical protein;protein_id=MBO1929570.1;transl_table=11
JAGETS010000056.1	Genbank	pseudogene	1423	2053	.	-	.	ID=gene-J4731_18725;Name=J4731_18725;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_18725;pseudo=true
JAGETS010000056.1	Protein Homology	CDS	1423	2053	.	-	0	ID=cds-J4731_18725;Parent=gene-J4731_18725;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_032495680.1;locus_tag=J4731_18725;product=QnrD family quinolone resistance pentapeptide repeat protein;pseudo=true;transl_table=11
JAGETS010000056.1	Genbank	gene	2244	2471	.	-	.	ID=gene-J4731_18730;Name=J4731_18730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_18730
JAGETS010000056.1	GeneMarkS-2+	CDS	2244	2471	.	-	0	ID=cds-MBO1929571.1;Parent=gene-J4731_18730;Dbxref=NCBI_GP:MBO1929571.1;Name=MBO1929571.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_18730;product=hypothetical protein;protein_id=MBO1929571.1;transl_table=11
##sequence-region JAGETS010000057.1 1 2867
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=587
JAGETS010000057.1	Genbank	region	1	2867	.	+	.	ID=JAGETS010000057.1:1..2867;Dbxref=taxon:587;collected-by=NHLS;collection-date=2018;country=South Africa: Pretoria;gbkey=Src;isolation-source=stool;lat-lon=25.7479 S 28.2293 E;mol_type=genomic DNA;nat-host=porcine;strain=SG003
JAGETS010000057.1	Genbank	gene	412	726	.	-	.	ID=gene-J4731_18735;Name=J4731_18735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_18735
JAGETS010000057.1	GeneMarkS-2+	CDS	412	726	.	-	0	ID=cds-MBO1929572.1;Parent=gene-J4731_18735;Dbxref=NCBI_GP:MBO1929572.1;Name=MBO1929572.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_18735;product=hypothetical protein;protein_id=MBO1929572.1;transl_table=11
JAGETS010000057.1	Genbank	gene	995	1231	.	-	.	ID=gene-J4731_18740;Name=J4731_18740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_18740
JAGETS010000057.1	GeneMarkS-2+	CDS	995	1231	.	-	0	ID=cds-MBO1929573.1;Parent=gene-J4731_18740;Dbxref=NCBI_GP:MBO1929573.1;Name=MBO1929573.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_18740;product=hypothetical protein;protein_id=MBO1929573.1;transl_table=11
JAGETS010000057.1	Genbank	gene	1228	1434	.	-	.	ID=gene-J4731_18745;Name=J4731_18745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_18745
JAGETS010000057.1	GeneMarkS-2+	CDS	1228	1434	.	-	0	ID=cds-MBO1929574.1;Parent=gene-J4731_18745;Dbxref=NCBI_GP:MBO1929574.1;Name=MBO1929574.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_18745;product=hypothetical protein;protein_id=MBO1929574.1;transl_table=11
JAGETS010000057.1	Genbank	pseudogene	2069	2686	.	-	.	ID=gene-J4731_18750;Name=J4731_18750;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_18750;pseudo=true
JAGETS010000057.1	Protein Homology	CDS	2069	2686	.	-	0	ID=cds-J4731_18750;Parent=gene-J4731_18750;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017799010.1;locus_tag=J4731_18750;product=QnrD family quinolone resistance pentapeptide repeat protein;pseudo=true;transl_table=11
##sequence-region JAGETS010000058.1 1 2759
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=587
JAGETS010000058.1	Genbank	region	1	2759	.	+	.	ID=JAGETS010000058.1:1..2759;Dbxref=taxon:587;collected-by=NHLS;collection-date=2018;country=South Africa: Pretoria;gbkey=Src;isolation-source=stool;lat-lon=25.7479 S 28.2293 E;mol_type=genomic DNA;nat-host=porcine;strain=SG003
JAGETS010000058.1	Genbank	pseudogene	274	914	.	-	.	ID=gene-J4731_18755;Name=J4731_18755;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_18755;pseudo=true
JAGETS010000058.1	Protein Homology	CDS	274	914	.	-	0	ID=cds-J4731_18755;Parent=gene-J4731_18755;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_032495680.1;locus_tag=J4731_18755;product=QnrD family quinolone resistance pentapeptide repeat protein;pseudo=true;transl_table=11
JAGETS010000058.1	Genbank	gene	1204	1590	.	-	.	ID=gene-J4731_18760;Name=J4731_18760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_18760
JAGETS010000058.1	GeneMarkS-2+	CDS	1204	1590	.	-	0	ID=cds-MBO1929575.1;Parent=gene-J4731_18760;Dbxref=NCBI_GP:MBO1929575.1;Name=MBO1929575.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_18760;product=hypothetical protein;protein_id=MBO1929575.1;transl_table=11
JAGETS010000058.1	Genbank	gene	1859	2080	.	-	.	ID=gene-J4731_18765;Name=J4731_18765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_18765
JAGETS010000058.1	GeneMarkS-2+	CDS	1859	2080	.	-	0	ID=cds-MBO1929576.1;Parent=gene-J4731_18765;Dbxref=NCBI_GP:MBO1929576.1;Name=MBO1929576.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_18765;product=hypothetical protein;protein_id=MBO1929576.1;transl_table=11
JAGETS010000058.1	Genbank	gene	2129	2296	.	-	.	ID=gene-J4731_18770;Name=J4731_18770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_18770
JAGETS010000058.1	GeneMarkS-2+	CDS	2129	2296	.	-	0	ID=cds-MBO1929577.1;Parent=gene-J4731_18770;Dbxref=NCBI_GP:MBO1929577.1;Name=MBO1929577.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_18770;product=hypothetical protein;protein_id=MBO1929577.1;transl_table=11
##sequence-region JAGETS010000059.1 1 2583
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=587
JAGETS010000059.1	Genbank	region	1	2583	.	+	.	ID=JAGETS010000059.1:1..2583;Dbxref=taxon:587;collected-by=NHLS;collection-date=2018;country=South Africa: Pretoria;gbkey=Src;isolation-source=stool;lat-lon=25.7479 S 28.2293 E;mol_type=genomic DNA;nat-host=porcine;strain=SG003
JAGETS010000059.1	Genbank	gene	1	215	.	+	.	ID=gene-J4731_18775;Name=J4731_18775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_18775;partial=true;start_range=.,1
JAGETS010000059.1	GeneMarkS-2+	CDS	1	215	.	+	2	ID=cds-MBO1929578.1;Parent=gene-J4731_18775;Dbxref=NCBI_GP:MBO1929578.1;Name=MBO1929578.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_18775;partial=true;product=hypothetical protein;protein_id=MBO1929578.1;start_range=.,1;transl_table=11
JAGETS010000059.1	Genbank	pseudogene	250	893	.	-	.	ID=gene-J4731_18780;Name=J4731_18780;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_18780;pseudo=true
JAGETS010000059.1	Protein Homology	CDS	250	893	.	-	0	ID=cds-J4731_18780;Parent=gene-J4731_18780;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_032495680.1;locus_tag=J4731_18780;product=QnrD family quinolone resistance pentapeptide repeat protein;pseudo=true;transl_table=11
JAGETS010000059.1	Genbank	gene	1068	1574	.	-	.	ID=gene-J4731_18785;Name=J4731_18785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_18785
JAGETS010000059.1	GeneMarkS-2+	CDS	1068	1574	.	-	0	ID=cds-MBO1929579.1;Parent=gene-J4731_18785;Dbxref=NCBI_GP:MBO1929579.1;Name=MBO1929579.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_18785;product=hypothetical protein;protein_id=MBO1929579.1;transl_table=11
JAGETS010000059.1	Genbank	gene	1887	2063	.	-	.	ID=gene-J4731_18790;Name=J4731_18790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_18790
JAGETS010000059.1	GeneMarkS-2+	CDS	1887	2063	.	-	0	ID=cds-MBO1929580.1;Parent=gene-J4731_18790;Dbxref=NCBI_GP:MBO1929580.1;Name=MBO1929580.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_18790;product=hypothetical protein;protein_id=MBO1929580.1;transl_table=11
JAGETS010000059.1	Genbank	gene	2112	2360	.	-	.	ID=gene-J4731_18795;Name=J4731_18795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_18795
JAGETS010000059.1	GeneMarkS-2+	CDS	2112	2360	.	-	0	ID=cds-MBO1929581.1;Parent=gene-J4731_18795;Dbxref=NCBI_GP:MBO1929581.1;Name=MBO1929581.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_18795;product=hypothetical protein;protein_id=MBO1929581.1;transl_table=11
##sequence-region JAGETS010000006.1 1 215509
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=587
JAGETS010000006.1	Genbank	region	1	215509	.	+	.	ID=JAGETS010000006.1:1..215509;Dbxref=taxon:587;collected-by=NHLS;collection-date=2018;country=South Africa: Pretoria;gbkey=Src;isolation-source=stool;lat-lon=25.7479 S 28.2293 E;mol_type=genomic DNA;nat-host=porcine;strain=SG003
JAGETS010000006.1	Genbank	pseudogene	1	529	.	-	.	ID=gene-J4731_01790;Name=J4731_01790;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_01790;pseudo=true
JAGETS010000006.1	Protein Homology	CDS	1	529	.	-	0	ID=cds-J4731_01790;Parent=gene-J4731_01790;Note=frameshifted%3B incomplete%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010848680.1;locus_tag=J4731_01790;product=AbgT family transporter;pseudo=true;transl_table=11
JAGETS010000006.1	Genbank	pseudogene	969	1270	.	+	.	ID=gene-J4731_01795;Name=J4731_01795;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_01795;pseudo=true
JAGETS010000006.1	Protein Homology	CDS	969	1270	.	+	0	ID=cds-J4731_01795;Parent=gene-J4731_01795;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006658514.1;locus_tag=J4731_01795;product=DUF1992 domain-containing protein;pseudo=true;transl_table=11
JAGETS010000006.1	Genbank	pseudogene	1536	1948	.	+	.	ID=gene-J4731_01800;Name=J4731_01800;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_01800;pseudo=true
JAGETS010000006.1	Protein Homology	CDS	1536	1948	.	+	0	ID=cds-J4731_01800;Parent=gene-J4731_01800;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004242555.1;locus_tag=J4731_01800;product=DUF2628 domain-containing protein;pseudo=true;transl_table=11
JAGETS010000006.1	Genbank	pseudogene	1985	2707	.	-	.	ID=gene-J4731_01805;Name=J4731_01805;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_01805;pseudo=true
JAGETS010000006.1	Protein Homology	CDS	1985	2707	.	-	0	ID=cds-J4731_01805;Parent=gene-J4731_01805;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006658513.1;locus_tag=J4731_01805;product=helix-turn-helix domain-containing protein;pseudo=true;transl_table=11
JAGETS010000006.1	Genbank	pseudogene	2788	3091	.	-	.	ID=gene-J4731_01810;Name=J4731_01810;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_01810;pseudo=true
JAGETS010000006.1	Protein Homology	CDS	2788	3091	.	-	0	ID=cds-J4731_01810;Parent=gene-J4731_01810;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016151372.1;locus_tag=J4731_01810;product=type II toxin-antitoxin system RelE/ParE family toxin;pseudo=true;transl_table=11
JAGETS010000006.1	Genbank	pseudogene	3091	3323	.	-	.	ID=gene-J4731_01815;Name=J4731_01815;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_01815;pseudo=true
JAGETS010000006.1	Protein Homology	CDS	3091	3323	.	-	0	ID=cds-J4731_01815;Parent=gene-J4731_01815;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016155179.1;locus_tag=J4731_01815;product=type II toxin-antitoxin system ParD family antitoxin;pseudo=true;transl_table=11
JAGETS010000006.1	Genbank	pseudogene	3398	3728	.	-	.	ID=gene-J4731_01820;Name=J4731_01820;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_01820;pseudo=true
JAGETS010000006.1	Protein Homology	CDS	3398	3728	.	-	0	ID=cds-J4731_01820;Parent=gene-J4731_01820;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006658512.1;locus_tag=J4731_01820;product=tRNA-binding protein;pseudo=true;transl_table=11
JAGETS010000006.1	Genbank	pseudogene	3920	4245	.	-	.	ID=gene-J4731_01825;Name=J4731_01825;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_01825;pseudo=true
JAGETS010000006.1	Protein Homology	CDS	3920	4245	.	-	0	ID=cds-J4731_01825;Parent=gene-J4731_01825;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011705235.1;locus_tag=J4731_01825;product=multidrug efflux SMR transporter;pseudo=true;transl_table=11
JAGETS010000006.1	Genbank	gene	4267	4695	.	-	.	ID=gene-J4731_01830;Name=J4731_01830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_01830
JAGETS010000006.1	Protein Homology	CDS	4267	4695	.	-	0	ID=cds-MBO1928638.1;Parent=gene-J4731_01830;Dbxref=NCBI_GP:MBO1928638.1;Name=MBO1928638.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006658510.1;locus_tag=J4731_01830;product=multidrug efflux SMR transporter;protein_id=MBO1928638.1;transl_table=11
JAGETS010000006.1	Genbank	gene	4751	5440	.	-	.	ID=gene-J4731_01835;Name=J4731_01835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_01835
JAGETS010000006.1	Protein Homology	CDS	4751	5440	.	-	0	ID=cds-MBO1928639.1;Parent=gene-J4731_01835;Dbxref=NCBI_GP:MBO1928639.1;Name=MBO1928639.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004259027.1;locus_tag=J4731_01835;product=hypothetical protein;protein_id=MBO1928639.1;transl_table=11
JAGETS010000006.1	Genbank	pseudogene	5452	6094	.	-	.	ID=gene-J4731_01840;Name=J4731_01840;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_01840;pseudo=true
JAGETS010000006.1	Protein Homology	CDS	5452	6094	.	-	0	ID=cds-J4731_01840;Parent=gene-J4731_01840;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004259030.1;locus_tag=J4731_01840;product=phosphate propanoyltransferase;pseudo=true;transl_table=11
JAGETS010000006.1	Genbank	pseudogene	6131	6520	.	-	.	ID=gene-J4731_01845;Name=J4731_01845;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_01845;pseudo=true
JAGETS010000006.1	Protein Homology	CDS	6131	6520	.	-	0	ID=cds-J4731_01845;Parent=gene-J4731_01845;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006814371.1;locus_tag=J4731_01845;product=BMC domain-containing protein;pseudo=true;transl_table=11
JAGETS010000006.1	Genbank	pseudogene	6534	7483	.	-	.	ID=gene-J4731_01850;Name=cutD;gbkey=Gene;gene=cutD;gene_biotype=pseudogene;locus_tag=J4731_01850;pseudo=true
JAGETS010000006.1	Protein Homology	CDS	6534	7483	.	-	0	ID=cds-J4731_01850;Parent=gene-J4731_01850;Note=frameshifted;gbkey=CDS;gene=cutD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020316596.1;locus_tag=J4731_01850;product=choline TMA-lyase-activating enzyme;pseudo=true;transl_table=11
JAGETS010000006.1	Genbank	pseudogene	7571	10989	.	-	.	ID=gene-J4731_01855;Name=cutC;gbkey=Gene;gene=cutC;gene_biotype=pseudogene;locus_tag=J4731_01855;pseudo=true
JAGETS010000006.1	Protein Homology	CDS	7571	10989	.	-	0	ID=cds-J4731_01855;Parent=gene-J4731_01855;Note=frameshifted;gbkey=CDS;gene=cutC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004182805.1;locus_tag=J4731_01855;product=choline trimethylamine-lyase;pseudo=true;transl_table=11
JAGETS010000006.1	Genbank	pseudogene	11048	12172	.	-	.	ID=gene-J4731_01860;Name=J4731_01860;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_01860;pseudo=true
JAGETS010000006.1	Protein Homology	CDS	11048	12172	.	-	0	ID=cds-J4731_01860;Parent=gene-J4731_01860;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004259053.1;locus_tag=J4731_01860;product=iron-containing alcohol dehydrogenase;pseudo=true;transl_table=11
JAGETS010000006.1	Genbank	gene	12180	12437	.	-	.	ID=gene-J4731_01865;Name=J4731_01865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_01865
JAGETS010000006.1	Protein Homology	CDS	12180	12437	.	-	0	ID=cds-MBO1928640.1;Parent=gene-J4731_01865;Dbxref=NCBI_GP:MBO1928640.1;Name=MBO1928640.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004245867.1;locus_tag=J4731_01865;product=EutN/CcmL family microcompartment protein;protein_id=MBO1928640.1;transl_table=11
JAGETS010000006.1	Genbank	pseudogene	12464	14072	.	-	.	ID=gene-J4731_01870;Name=J4731_01870;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_01870;pseudo=true
JAGETS010000006.1	Protein Homology	CDS	12464	14072	.	-	0	ID=cds-J4731_01870;Parent=gene-J4731_01870;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012969030.1;locus_tag=J4731_01870;product=acetaldehyde dehydrogenase (acetylating);pseudo=true;transl_table=11
JAGETS010000006.1	Genbank	pseudogene	14150	14435	.	-	.	ID=gene-J4731_01875;Name=J4731_01875;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_01875;pseudo=true
JAGETS010000006.1	Protein Homology	CDS	14150	14435	.	-	0	ID=cds-J4731_01875;Parent=gene-J4731_01875;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017766566.1;locus_tag=J4731_01875;product=BMC domain-containing protein;pseudo=true;transl_table=11
JAGETS010000006.1	Genbank	gene	14540	14716	.	-	.	ID=gene-J4731_01880;Name=J4731_01880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_01880
JAGETS010000006.1	Protein Homology	CDS	14540	14716	.	-	0	ID=cds-MBO1928641.1;Parent=gene-J4731_01880;Dbxref=NCBI_GP:MBO1928641.1;Name=MBO1928641.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001183618.1;locus_tag=J4731_01880;product=BMC domain-containing protein;protein_id=MBO1928641.1;transl_table=11
JAGETS010000006.1	Genbank	gene	14739	15014	.	-	.	ID=gene-J4731_01885;Name=J4731_01885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_01885
JAGETS010000006.1	Protein Homology	CDS	14739	15014	.	-	0	ID=cds-MBO1928642.1;Parent=gene-J4731_01885;Dbxref=NCBI_GP:MBO1928642.1;Name=MBO1928642.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_023226677.1;locus_tag=J4731_01885;product=BMC domain-containing protein;protein_id=MBO1928642.1;transl_table=11
JAGETS010000006.1	Genbank	pseudogene	15640	16154	.	-	.	ID=gene-J4731_01890;Name=J4731_01890;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_01890;pseudo=true
JAGETS010000006.1	Protein Homology	CDS	15640	16154	.	-	0	ID=cds-J4731_01890;Parent=gene-J4731_01890;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006536331.1;locus_tag=J4731_01890;product=hypothetical protein;pseudo=true;transl_table=11
JAGETS010000006.1	Genbank	pseudogene	16151	16989	.	-	.	ID=gene-J4731_01895;Name=J4731_01895;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_01895;pseudo=true
JAGETS010000006.1	Protein Homology	CDS	16151	16989	.	-	0	ID=cds-J4731_01895;Parent=gene-J4731_01895;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004110280.1;locus_tag=J4731_01895;product=winged helix-turn-helix domain-containing protein;pseudo=true;transl_table=11
JAGETS010000006.1	Genbank	pseudogene	17069	17648	.	-	.	ID=gene-J4731_01900;Name=J4731_01900;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_01900;pseudo=true
JAGETS010000006.1	Protein Homology	CDS	17069	17648	.	-	0	ID=cds-J4731_01900;Parent=gene-J4731_01900;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004133049.1;locus_tag=J4731_01900;product=TetR family transcriptional regulator;pseudo=true;transl_table=11
JAGETS010000006.1	Genbank	gene	17936	18490	.	+	.	ID=gene-J4731_01905;Name=J4731_01905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_01905
JAGETS010000006.1	Protein Homology	CDS	17936	18490	.	+	0	ID=cds-MBO1928643.1;Parent=gene-J4731_01905;Dbxref=NCBI_GP:MBO1928643.1;Name=MBO1928643.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006658495.1;locus_tag=J4731_01905;product=NAD(P)H-dependent oxidoreductase;protein_id=MBO1928643.1;transl_table=11
JAGETS010000006.1	Genbank	pseudogene	18727	19735	.	-	.	ID=gene-J4731_01910;Name=potD;gbkey=Gene;gene=potD;gene_biotype=pseudogene;locus_tag=J4731_01910;pseudo=true
JAGETS010000006.1	Protein Homology	CDS	18727	19735	.	-	0	ID=cds-J4731_01910;Parent=gene-J4731_01910;Note=frameshifted;gbkey=CDS;gene=potD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121082.1;locus_tag=J4731_01910;product=spermidine/putrescine ABC transporter substrate-binding protein PotD;pseudo=true;transl_table=11
JAGETS010000006.1	Genbank	pseudogene	19924	20704	.	-	.	ID=gene-J4731_01915;Name=potC;gbkey=Gene;gene=potC;gene_biotype=pseudogene;locus_tag=J4731_01915;pseudo=true
JAGETS010000006.1	Protein Homology	CDS	19924	20704	.	-	0	ID=cds-J4731_01915;Parent=gene-J4731_01915;Note=frameshifted;gbkey=CDS;gene=potC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004234794.1;locus_tag=J4731_01915;product=spermidine/putrescine ABC transporter permease PotC;pseudo=true;transl_table=11
JAGETS010000006.1	Genbank	pseudogene	20701	21549	.	-	.	ID=gene-J4731_01920;Name=potB;gbkey=Gene;gene=potB;gene_biotype=pseudogene;locus_tag=J4731_01920;pseudo=true
JAGETS010000006.1	Protein Homology	CDS	20701	21549	.	-	0	ID=cds-J4731_01920;Parent=gene-J4731_01920;Note=frameshifted%3B internal stop;gbkey=CDS;gene=potB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004259100.1;locus_tag=J4731_01920;product=spermidine/putrescine ABC transporter permease PotB;pseudo=true;transl_table=11
JAGETS010000006.1	Genbank	pseudogene	21536	22638	.	-	.	ID=gene-J4731_01925;Name=potA;gbkey=Gene;gene=potA;gene_biotype=pseudogene;locus_tag=J4731_01925;pseudo=true
JAGETS010000006.1	Protein Homology	CDS	21536	22638	.	-	0	ID=cds-J4731_01925;Parent=gene-J4731_01925;Note=frameshifted;gbkey=CDS;gene=potA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006814386.1;locus_tag=J4731_01925;product=spermidine/putrescine ABC transporter ATP-binding protein PotA;pseudo=true;transl_table=11
JAGETS010000006.1	Genbank	pseudogene	23541	25156	.	+	.	ID=gene-J4731_01930;Name=J4731_01930;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_01930;pseudo=true
JAGETS010000006.1	Protein Homology	CDS	23541	25156	.	+	0	ID=cds-J4731_01930;Parent=gene-J4731_01930;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000066639.1;locus_tag=J4731_01930;product=fumarate hydratase C-terminal domain-containing protein;pseudo=true;transl_table=11
JAGETS010000006.1	Genbank	pseudogene	25369	26317	.	-	.	ID=gene-J4731_01935;Name=J4731_01935;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_01935;pseudo=true
JAGETS010000006.1	Protein Homology	CDS	25369	26317	.	-	0	ID=cds-J4731_01935;Parent=gene-J4731_01935;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004917347.1;locus_tag=J4731_01935;product=fimbrial protein;pseudo=true;transl_table=11
JAGETS010000006.1	Genbank	pseudogene	26354	26801	.	-	.	ID=gene-J4731_01940;Name=J4731_01940;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_01940;pseudo=true
JAGETS010000006.1	Protein Homology	CDS	26354	26801	.	-	0	ID=cds-J4731_01940;Parent=gene-J4731_01940;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004917350.1;locus_tag=J4731_01940;product=fimbrial protein;pseudo=true;transl_table=11
JAGETS010000006.1	Genbank	pseudogene	26885	27606	.	-	.	ID=gene-J4731_01945;Name=J4731_01945;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_01945;pseudo=true
JAGETS010000006.1	Protein Homology	CDS	26885	27606	.	-	0	ID=cds-J4731_01945;Parent=gene-J4731_01945;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004917351.1;locus_tag=J4731_01945;product=molecular chaperone;pseudo=true;transl_table=11
JAGETS010000006.1	Genbank	pseudogene	27599	30098	.	-	.	ID=gene-J4731_01950;Name=J4731_01950;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_01950;pseudo=true
JAGETS010000006.1	Protein Homology	CDS	27599	30098	.	-	0	ID=cds-J4731_01950;Parent=gene-J4731_01950;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004259124.1;locus_tag=J4731_01950;product=fimbrial biogenesis outer membrane usher protein;pseudo=true;transl_table=11
JAGETS010000006.1	Genbank	pseudogene	30176	30727	.	-	.	ID=gene-J4731_01955;Name=J4731_01955;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_01955;pseudo=true
JAGETS010000006.1	Protein Homology	CDS	30176	30727	.	-	0	ID=cds-J4731_01955;Parent=gene-J4731_01955;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004259129.1;locus_tag=J4731_01955;product=fimbrial protein;pseudo=true;transl_table=11
JAGETS010000006.1	Genbank	gene	30968	31138	.	-	.	ID=gene-J4731_01960;Name=J4731_01960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_01960
JAGETS010000006.1	Protein Homology	CDS	30968	31138	.	-	0	ID=cds-MBO1928644.1;Parent=gene-J4731_01960;Dbxref=NCBI_GP:MBO1928644.1;Name=MBO1928644.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004927213.1;locus_tag=J4731_01960;product=helix-turn-helix transcriptional regulator;protein_id=MBO1928644.1;transl_table=11
JAGETS010000006.1	Genbank	pseudogene	32509	33417	.	+	.	ID=gene-J4731_01965;Name=J4731_01965;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_01965;pseudo=true
JAGETS010000006.1	Protein Homology	CDS	32509	33417	.	+	0	ID=cds-J4731_01965;Parent=gene-J4731_01965;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004238541.1;locus_tag=J4731_01965;product=acyltransferase;pseudo=true;transl_table=11
JAGETS010000006.1	Genbank	pseudogene	33491	33659	.	+	.	ID=gene-J4731_01970;Name=J4731_01970;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_01970;pseudo=true
JAGETS010000006.1	Protein Homology	CDS	33491	33659	.	+	0	ID=cds-J4731_01970;Parent=gene-J4731_01970;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005166190.1;locus_tag=J4731_01970;product=LysR family transcriptional regulator;pseudo=true;transl_table=11
JAGETS010000006.1	Genbank	gene	33809	33946	.	+	.	ID=gene-J4731_01975;Name=J4731_01975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_01975
JAGETS010000006.1	GeneMarkS-2+	CDS	33809	33946	.	+	0	ID=cds-MBO1928645.1;Parent=gene-J4731_01975;Dbxref=NCBI_GP:MBO1928645.1;Name=MBO1928645.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_01975;product=hypothetical protein;protein_id=MBO1928645.1;transl_table=11
JAGETS010000006.1	Genbank	gene	33927	34154	.	+	.	ID=gene-J4731_01980;Name=J4731_01980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_01980
JAGETS010000006.1	GeneMarkS-2+	CDS	33927	34154	.	+	0	ID=cds-MBO1928646.1;Parent=gene-J4731_01980;Dbxref=NCBI_GP:MBO1928646.1;Name=MBO1928646.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_01980;product=hypothetical protein;protein_id=MBO1928646.1;transl_table=11
JAGETS010000006.1	Genbank	gene	34114	34344	.	+	.	ID=gene-J4731_01985;Name=J4731_01985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_01985
JAGETS010000006.1	GeneMarkS-2+	CDS	34114	34344	.	+	0	ID=cds-MBO1928647.1;Parent=gene-J4731_01985;Dbxref=NCBI_GP:MBO1928647.1;Name=MBO1928647.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_01985;product=hypothetical protein;protein_id=MBO1928647.1;transl_table=11
JAGETS010000006.1	Genbank	pseudogene	34480	35389	.	+	.	ID=gene-J4731_01990;Name=J4731_01990;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_01990;pseudo=true
JAGETS010000006.1	Protein Homology	CDS	34480	35389	.	+	0	ID=cds-J4731_01990;Parent=gene-J4731_01990;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004934639.1;locus_tag=J4731_01990;product=ketoacyl-ACP synthase III;pseudo=true;transl_table=11
JAGETS010000006.1	Genbank	pseudogene	35456	35823	.	+	.	ID=gene-J4731_01995;Name=J4731_01995;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_01995;pseudo=true
JAGETS010000006.1	Protein Homology	CDS	35456	35823	.	+	0	ID=cds-J4731_01995;Parent=gene-J4731_01995;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020882366.1;locus_tag=J4731_01995;product=NAD(P)-dependent oxidoreductase;pseudo=true;transl_table=11
JAGETS010000006.1	Genbank	gene	36006	36374	.	+	.	ID=gene-J4731_02000;Name=J4731_02000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_02000
JAGETS010000006.1	GeneMarkS-2+	CDS	36006	36374	.	+	0	ID=cds-MBO1928648.1;Parent=gene-J4731_02000;Dbxref=NCBI_GP:MBO1928648.1;Name=MBO1928648.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_02000;product=hypothetical protein;protein_id=MBO1928648.1;transl_table=11
JAGETS010000006.1	Genbank	pseudogene	36406	37201	.	+	.	ID=gene-J4731_02005;Name=J4731_02005;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_02005;pseudo=true
JAGETS010000006.1	Protein Homology	CDS	36406	37201	.	+	0	ID=cds-J4731_02005;Parent=gene-J4731_02005;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004259140.1;locus_tag=J4731_02005;product=MBL fold metallo-hydrolase;pseudo=true;transl_table=11
JAGETS010000006.1	Genbank	pseudogene	37210	38458	.	+	.	ID=gene-J4731_02010;Name=J4731_02010;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_02010;pseudo=true
JAGETS010000006.1	Protein Homology	CDS	37210	38458	.	+	0	ID=cds-J4731_02010;Parent=gene-J4731_02010;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192382.1;locus_tag=J4731_02010;product=CoF synthetase;pseudo=true;transl_table=11
JAGETS010000006.1	Genbank	pseudogene	38455	39057	.	+	.	ID=gene-J4731_02015;Name=J4731_02015;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_02015;pseudo=true
JAGETS010000006.1	Protein Homology	CDS	38455	39057	.	+	0	ID=cds-J4731_02015;Parent=gene-J4731_02015;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004259146.1;locus_tag=J4731_02015;product=inositol phosphorylceramide synthase;pseudo=true;transl_table=11
JAGETS010000006.1	Genbank	pseudogene	39086	40306	.	+	.	ID=gene-J4731_02020;Name=J4731_02020;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_02020;pseudo=true
JAGETS010000006.1	Protein Homology	CDS	39086	40306	.	+	0	ID=cds-J4731_02020;Parent=gene-J4731_02020;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013813402.1;locus_tag=J4731_02020;product=sterol desaturase family protein;pseudo=true;transl_table=11
JAGETS010000006.1	Genbank	gene	40401	40511	.	+	.	ID=gene-J4731_02025;Name=J4731_02025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_02025
JAGETS010000006.1	Protein Homology	CDS	40401	40511	.	+	0	ID=cds-MBO1928649.1;Parent=gene-J4731_02025;Dbxref=NCBI_GP:MBO1928649.1;Name=MBO1928649.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012699.1;locus_tag=J4731_02025;product=hypothetical protein;protein_id=MBO1928649.1;transl_table=11
JAGETS010000006.1	Genbank	gene	40573	40719	.	-	.	ID=gene-J4731_02030;Name=J4731_02030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_02030
JAGETS010000006.1	GeneMarkS-2+	CDS	40573	40719	.	-	0	ID=cds-MBO1928650.1;Parent=gene-J4731_02030;Dbxref=NCBI_GP:MBO1928650.1;Name=MBO1928650.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_02030;product=hypothetical protein;protein_id=MBO1928650.1;transl_table=11
JAGETS010000006.1	Genbank	gene	41009	41296	.	+	.	ID=gene-J4731_02035;Name=J4731_02035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_02035
JAGETS010000006.1	GeneMarkS-2+	CDS	41009	41296	.	+	0	ID=cds-MBO1928651.1;Parent=gene-J4731_02035;Dbxref=NCBI_GP:MBO1928651.1;Name=MBO1928651.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_02035;product=hypothetical protein;protein_id=MBO1928651.1;transl_table=11
JAGETS010000006.1	Genbank	pseudogene	41311	42546	.	-	.	ID=gene-J4731_02040;Name=J4731_02040;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_02040;pseudo=true
JAGETS010000006.1	Protein Homology	CDS	41311	42546	.	-	0	ID=cds-J4731_02040;Parent=gene-J4731_02040;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006814388.1;locus_tag=J4731_02040;product=polysaccharide deacetylase family protein;pseudo=true;transl_table=11
JAGETS010000006.1	Genbank	pseudogene	42880	43942	.	+	.	ID=gene-J4731_02045;Name=J4731_02045;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_02045;pseudo=true
JAGETS010000006.1	Protein Homology	CDS	42880	43942	.	+	0	ID=cds-J4731_02045;Parent=gene-J4731_02045;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000705119.1;locus_tag=J4731_02045;product=mandelate racemase/muconate lactonizing enzyme family protein;pseudo=true;transl_table=11
JAGETS010000006.1	Genbank	pseudogene	44189	45492	.	+	.	ID=gene-J4731_02050;Name=J4731_02050;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_02050;pseudo=true
JAGETS010000006.1	Protein Homology	CDS	44189	45492	.	+	0	ID=cds-J4731_02050;Parent=gene-J4731_02050;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009114980.1;locus_tag=J4731_02050;product=MFS transporter;pseudo=true;transl_table=11
JAGETS010000006.1	Genbank	pseudogene	45620	46389	.	+	.	ID=gene-J4731_02055;Name=J4731_02055;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_02055;pseudo=true
JAGETS010000006.1	Protein Homology	CDS	45620	46389	.	+	0	ID=cds-J4731_02055;Parent=gene-J4731_02055;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004259166.1;locus_tag=J4731_02055;product=Crp/Fnr family transcriptional regulator;pseudo=true;transl_table=11
JAGETS010000006.1	Genbank	pseudogene	46390	47149	.	-	.	ID=gene-J4731_02060;Name=exuR;gbkey=Gene;gene=exuR;gene_biotype=pseudogene;locus_tag=J4731_02060;pseudo=true
JAGETS010000006.1	Protein Homology	CDS	46390	47149	.	-	0	ID=cds-J4731_02060;Parent=gene-J4731_02060;Note=frameshifted;gbkey=CDS;gene=exuR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004259169.1;locus_tag=J4731_02060;product=transcriptional regulator ExuR;pseudo=true;transl_table=11
JAGETS010000006.1	Genbank	pseudogene	47390	48878	.	+	.	ID=gene-J4731_02065;Name=J4731_02065;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_02065;pseudo=true
JAGETS010000006.1	Protein Homology	CDS	47390	48878	.	+	0	ID=cds-J4731_02065;Parent=gene-J4731_02065;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004259171.1;locus_tag=J4731_02065;product=altronate dehydratase;pseudo=true;transl_table=11
JAGETS010000006.1	Genbank	pseudogene	49102	49941	.	+	.	ID=gene-J4731_02070;Name=J4731_02070;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_02070;pseudo=true
JAGETS010000006.1	Protein Homology	CDS	49102	49941	.	+	0	ID=cds-J4731_02070;Parent=gene-J4731_02070;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008912370.1;locus_tag=J4731_02070;product=MurR/RpiR family transcriptional regulator;pseudo=true;transl_table=11
JAGETS010000006.1	Genbank	pseudogene	50119	50568	.	+	.	ID=gene-J4731_02075;Name=J4731_02075;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_02075;pseudo=true
JAGETS010000006.1	Protein Homology	CDS	50119	50568	.	+	0	ID=cds-J4731_02075;Parent=gene-J4731_02075;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004259178.1;locus_tag=J4731_02075;product=PTS sugar transporter subunit IIA;pseudo=true;transl_table=11
JAGETS010000006.1	Genbank	pseudogene	50558	51008	.	+	.	ID=gene-J4731_02080;Name=J4731_02080;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_02080;pseudo=true
JAGETS010000006.1	Protein Homology	CDS	50558	51008	.	+	0	ID=cds-J4731_02080;Parent=gene-J4731_02080;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004102114.1;locus_tag=J4731_02080;product=PTS sugar transporter subunit IIB;pseudo=true;transl_table=11
JAGETS010000006.1	Genbank	pseudogene	51069	51823	.	+	.	ID=gene-J4731_02085;Name=J4731_02085;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_02085;pseudo=true
JAGETS010000006.1	Protein Homology	CDS	51069	51823	.	+	0	ID=cds-J4731_02085;Parent=gene-J4731_02085;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008912367.1;locus_tag=J4731_02085;product=PTS sugar transporter subunit IIC;pseudo=true;transl_table=11
JAGETS010000006.1	Genbank	pseudogene	51866	52667	.	+	.	ID=gene-J4731_02090;Name=J4731_02090;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_02090;pseudo=true
JAGETS010000006.1	Protein Homology	CDS	51866	52667	.	+	0	ID=cds-J4731_02090;Parent=gene-J4731_02090;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004102116.1;locus_tag=J4731_02090;product=PTS system mannose/fructose/sorbose family transporter subunit IID;pseudo=true;transl_table=11
JAGETS010000006.1	Genbank	pseudogene	52681	53794	.	+	.	ID=gene-J4731_02095;Name=J4731_02095;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_02095;pseudo=true
JAGETS010000006.1	Protein Homology	CDS	52681	53794	.	+	0	ID=cds-J4731_02095;Parent=gene-J4731_02095;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004102117.1;locus_tag=J4731_02095;product=tyrosine-protein phosphatase;pseudo=true;transl_table=11
JAGETS010000006.1	Genbank	pseudogene	53917	54592	.	-	.	ID=gene-J4731_02100;Name=J4731_02100;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_02100;pseudo=true
JAGETS010000006.1	Protein Homology	CDS	53917	54592	.	-	0	ID=cds-J4731_02100;Parent=gene-J4731_02100;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020882933.1;locus_tag=J4731_02100;product=L-ribulose-5-phosphate 4-epimerase;pseudo=true;transl_table=11
JAGETS010000006.1	Genbank	pseudogene	55050	55855	.	+	.	ID=gene-J4731_02105;Name=J4731_02105;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_02105;pseudo=true
JAGETS010000006.1	Protein Homology	CDS	55050	55855	.	+	0	ID=cds-J4731_02105;Parent=gene-J4731_02105;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004259195.1;locus_tag=J4731_02105;product=DeoR/GlpR transcriptional regulator;pseudo=true;transl_table=11
JAGETS010000006.1	Genbank	pseudogene	56095	57053	.	+	.	ID=gene-J4731_02110;Name=J4731_02110;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_02110;pseudo=true
JAGETS010000006.1	Protein Homology	CDS	56095	57053	.	+	0	ID=cds-J4731_02110;Parent=gene-J4731_02110;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014701374.1;locus_tag=J4731_02110;product=substrate-binding domain-containing protein;pseudo=true;transl_table=11
JAGETS010000006.1	Genbank	pseudogene	57211	58722	.	+	.	ID=gene-J4731_02115;Name=J4731_02115;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_02115;pseudo=true
JAGETS010000006.1	Protein Homology	CDS	57211	58722	.	+	0	ID=cds-J4731_02115;Parent=gene-J4731_02115;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004259199.1;locus_tag=J4731_02115;product=sugar ABC transporter ATP-binding protein;pseudo=true;transl_table=11
JAGETS010000006.1	Genbank	pseudogene	58715	59693	.	+	.	ID=gene-J4731_02120;Name=J4731_02120;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_02120;pseudo=true
JAGETS010000006.1	Protein Homology	CDS	58715	59693	.	+	0	ID=cds-J4731_02120;Parent=gene-J4731_02120;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105633.1;locus_tag=J4731_02120;product=ABC transporter permease;pseudo=true;transl_table=11
JAGETS010000006.1	Genbank	pseudogene	59707	60727	.	+	.	ID=gene-J4731_02125;Name=J4731_02125;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_02125;pseudo=true
JAGETS010000006.1	Protein Homology	CDS	59707	60727	.	+	0	ID=cds-J4731_02125;Parent=gene-J4731_02125;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004259206.1;locus_tag=J4731_02125;product=ABC transporter permease;pseudo=true;transl_table=11
JAGETS010000006.1	Genbank	pseudogene	60745	61597	.	+	.	ID=gene-J4731_02130;Name=J4731_02130;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_02130;pseudo=true
JAGETS010000006.1	Protein Homology	CDS	60745	61597	.	+	0	ID=cds-J4731_02130;Parent=gene-J4731_02130;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004259209.1;locus_tag=J4731_02130;product=L-ribulose-5-phosphate 3-epimerase;pseudo=true;transl_table=11
JAGETS010000006.1	Genbank	pseudogene	61609	63078	.	+	.	ID=gene-J4731_02135;Name=J4731_02135;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_02135;pseudo=true
JAGETS010000006.1	Protein Homology	CDS	61609	63078	.	+	0	ID=cds-J4731_02135;Parent=gene-J4731_02135;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006662494.1;locus_tag=J4731_02135;product=carbohydrate kinase;pseudo=true;transl_table=11
JAGETS010000006.1	Genbank	gene	63251	63586	.	-	.	ID=gene-J4731_02140;Name=J4731_02140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_02140
JAGETS010000006.1	Protein Homology	CDS	63251	63586	.	-	0	ID=cds-MBO1928652.1;Parent=gene-J4731_02140;Dbxref=NCBI_GP:MBO1928652.1;Name=MBO1928652.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013080.1;locus_tag=J4731_02140;product=sulfatase-like hydrolase/transferase;protein_id=MBO1928652.1;transl_table=11
JAGETS010000006.1	Genbank	gene	63514	63750	.	-	.	ID=gene-J4731_02145;Name=J4731_02145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_02145
JAGETS010000006.1	GeneMarkS-2+	CDS	63514	63750	.	-	0	ID=cds-MBO1928653.1;Parent=gene-J4731_02145;Dbxref=NCBI_GP:MBO1928653.1;Name=MBO1928653.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_02145;product=hypothetical protein;protein_id=MBO1928653.1;transl_table=11
JAGETS010000006.1	Genbank	gene	64107	64307	.	-	.	ID=gene-J4731_02150;Name=J4731_02150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_02150
JAGETS010000006.1	GeneMarkS-2+	CDS	64107	64307	.	-	0	ID=cds-MBO1928654.1;Parent=gene-J4731_02150;Dbxref=NCBI_GP:MBO1928654.1;Name=MBO1928654.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_02150;product=hypothetical protein;protein_id=MBO1928654.1;transl_table=11
JAGETS010000006.1	Genbank	gene	64304	64465	.	-	.	ID=gene-J4731_02155;Name=J4731_02155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_02155
JAGETS010000006.1	GeneMarkS-2+	CDS	64304	64465	.	-	0	ID=cds-MBO1928655.1;Parent=gene-J4731_02155;Dbxref=NCBI_GP:MBO1928655.1;Name=MBO1928655.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_02155;product=hypothetical protein;protein_id=MBO1928655.1;transl_table=11
JAGETS010000006.1	Genbank	gene	64907	65095	.	+	.	ID=gene-J4731_02160;Name=J4731_02160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_02160
JAGETS010000006.1	GeneMarkS-2+	CDS	64907	65095	.	+	0	ID=cds-MBO1928656.1;Parent=gene-J4731_02160;Dbxref=NCBI_GP:MBO1928656.1;Name=MBO1928656.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_02160;product=hypothetical protein;protein_id=MBO1928656.1;transl_table=11
JAGETS010000006.1	Genbank	gene	65074	65385	.	+	.	ID=gene-J4731_02165;Name=J4731_02165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_02165
JAGETS010000006.1	GeneMarkS-2+	CDS	65074	65385	.	+	0	ID=cds-MBO1928657.1;Parent=gene-J4731_02165;Dbxref=NCBI_GP:MBO1928657.1;Name=MBO1928657.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_02165;product=hypothetical protein;protein_id=MBO1928657.1;transl_table=11
JAGETS010000006.1	Genbank	pseudogene	65709	66684	.	+	.	ID=gene-J4731_02170;Name=J4731_02170;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_02170;pseudo=true
JAGETS010000006.1	Protein Homology	CDS	65709	66684	.	+	0	ID=cds-J4731_02170;Parent=gene-J4731_02170;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003827390.1;locus_tag=J4731_02170;product=sugar kinase;pseudo=true;transl_table=11
JAGETS010000006.1	Genbank	pseudogene	66697	67970	.	+	.	ID=gene-J4731_02175;Name=J4731_02175;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_02175;pseudo=true
JAGETS010000006.1	Protein Homology	CDS	66697	67970	.	+	0	ID=cds-J4731_02175;Parent=gene-J4731_02175;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004259221.1;locus_tag=J4731_02175;product=MFS transporter;pseudo=true;transl_table=11
JAGETS010000006.1	Genbank	pseudogene	67980	68964	.	+	.	ID=gene-J4731_02180;Name=J4731_02180;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_02180;pseudo=true
JAGETS010000006.1	Protein Homology	CDS	67980	68964	.	+	0	ID=cds-J4731_02180;Parent=gene-J4731_02180;Note=catalyzes the formation of glycolate from glyoxylate and glycerate from hydroxypyruvate%3B frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012004530.1;locus_tag=J4731_02180;product=bifunctional glyoxylate/hydroxypyruvate reductase B;pseudo=true;transl_table=11
JAGETS010000006.1	Genbank	gene	69085	69456	.	-	.	ID=gene-J4731_02185;Name=J4731_02185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_02185
JAGETS010000006.1	GeneMarkS-2+	CDS	69085	69456	.	-	0	ID=cds-MBO1928658.1;Parent=gene-J4731_02185;Dbxref=NCBI_GP:MBO1928658.1;Name=MBO1928658.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_02185;product=hypothetical protein;protein_id=MBO1928658.1;transl_table=11
JAGETS010000006.1	Genbank	pseudogene	69579	70556	.	-	.	ID=gene-J4731_02190;Name=J4731_02190;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_02190;pseudo=true
JAGETS010000006.1	Protein Homology	CDS	69579	70556	.	-	0	ID=cds-J4731_02190;Parent=gene-J4731_02190;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006321734.1;locus_tag=J4731_02190;product=substrate-binding domain-containing protein;pseudo=true;transl_table=11
JAGETS010000006.1	Genbank	pseudogene	70624	71611	.	-	.	ID=gene-J4731_02195;Name=dsdC;gbkey=Gene;gene=dsdC;gene_biotype=pseudogene;locus_tag=J4731_02195;pseudo=true
JAGETS010000006.1	Protein Homology	CDS	70624	71611	.	-	0	ID=cds-J4731_02195;Parent=gene-J4731_02195;Note=frameshifted;gbkey=CDS;gene=dsdC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004259232.1;locus_tag=J4731_02195;product=DNA-binding transcriptional regulator DsdC;pseudo=true;transl_table=11
JAGETS010000006.1	Genbank	pseudogene	71829	73162	.	+	.	ID=gene-J4731_02200;Name=dsdX;gbkey=Gene;gene=dsdX;gene_biotype=pseudogene;locus_tag=J4731_02200;pseudo=true
JAGETS010000006.1	Protein Homology	CDS	71829	73162	.	+	0	ID=cds-J4731_02200;Parent=gene-J4731_02200;Note=frameshifted;gbkey=CDS;gene=dsdX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462702.1;locus_tag=J4731_02200;product=D-serine transporter DsdX;pseudo=true;transl_table=11
JAGETS010000006.1	Genbank	pseudogene	73175	74496	.	+	.	ID=gene-J4731_02205;Name=dsdA;gbkey=Gene;gene=dsdA;gene_biotype=pseudogene;locus_tag=J4731_02205;pseudo=true
JAGETS010000006.1	Protein Homology	CDS	73175	74496	.	+	0	ID=cds-J4731_02205;Parent=gene-J4731_02205;Note=frameshifted;gbkey=CDS;gene=dsdA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004962824.1;locus_tag=J4731_02205;product=D-serine ammonia-lyase;pseudo=true;transl_table=11
JAGETS010000006.1	Genbank	gene	74570	75631	.	-	.	ID=gene-J4731_02210;Name=J4731_02210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_02210
JAGETS010000006.1	Protein Homology	CDS	74570	75631	.	-	0	ID=cds-MBO1928659.1;Parent=gene-J4731_02210;Dbxref=NCBI_GP:MBO1928659.1;Name=MBO1928659.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008912363.1;locus_tag=J4731_02210;product=osmoprotectant NAGGN system M42 family peptidase;protein_id=MBO1928659.1;transl_table=11
JAGETS010000006.1	Genbank	pseudogene	75636	76399	.	-	.	ID=gene-J4731_02215;Name=J4731_02215;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_02215;pseudo=true
JAGETS010000006.1	Protein Homology	CDS	75636	76399	.	-	0	ID=cds-J4731_02215;Parent=gene-J4731_02215;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008912362.1;locus_tag=J4731_02215;product=FadR family transcriptional regulator;pseudo=true;transl_table=11
JAGETS010000006.1	Genbank	gene	76641	77045	.	-	.	ID=gene-J4731_02220;Name=J4731_02220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_02220
JAGETS010000006.1	Protein Homology	CDS	76641	77045	.	-	0	ID=cds-MBO1928660.1;Parent=gene-J4731_02220;Dbxref=NCBI_GP:MBO1928660.1;Name=MBO1928660.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012235.1;locus_tag=J4731_02220;product=ATP-binding cassette domain-containing protein;protein_id=MBO1928660.1;transl_table=11
JAGETS010000006.1	Genbank	gene	77079	77219	.	-	.	ID=gene-J4731_02225;Name=J4731_02225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_02225
JAGETS010000006.1	GeneMarkS-2+	CDS	77079	77219	.	-	0	ID=cds-MBO1928661.1;Parent=gene-J4731_02225;Dbxref=NCBI_GP:MBO1928661.1;Name=MBO1928661.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_02225;product=hypothetical protein;protein_id=MBO1928661.1;transl_table=11
JAGETS010000006.1	Genbank	pseudogene	77219	79001	.	-	.	ID=gene-J4731_02230;Name=J4731_02230;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_02230;pseudo=true
JAGETS010000006.1	Protein Homology	CDS	77219	79001	.	-	0	ID=cds-J4731_02230;Parent=gene-J4731_02230;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013574977.1;locus_tag=J4731_02230;product=dipeptide/oligopeptide/nickel ABC transporter permease/ATP-binding protein;pseudo=true;transl_table=11
JAGETS010000006.1	Genbank	pseudogene	79021	79955	.	-	.	ID=gene-J4731_02235;Name=J4731_02235;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_02235;pseudo=true
JAGETS010000006.1	Protein Homology	CDS	79021	79955	.	-	0	ID=cds-J4731_02235;Parent=gene-J4731_02235;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004917386.1;locus_tag=J4731_02235;product=ABC transporter permease;pseudo=true;transl_table=11
JAGETS010000006.1	Genbank	pseudogene	80005	81545	.	-	.	ID=gene-J4731_02240;Name=J4731_02240;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_02240;pseudo=true
JAGETS010000006.1	Protein Homology	CDS	80005	81545	.	-	0	ID=cds-J4731_02240;Parent=gene-J4731_02240;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004917390.1;locus_tag=J4731_02240;product=ABC transporter substrate-binding protein;pseudo=true;transl_table=11
JAGETS010000006.1	Genbank	pseudogene	81709	82367	.	+	.	ID=gene-J4731_02245;Name=J4731_02245;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_02245;pseudo=true
JAGETS010000006.1	Protein Homology	CDS	81709	82367	.	+	0	ID=cds-J4731_02245;Parent=gene-J4731_02245;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004259254.1;locus_tag=J4731_02245;product=DUF1028 domain-containing protein;pseudo=true;transl_table=11
JAGETS010000006.1	Genbank	pseudogene	83277	84676	.	+	.	ID=gene-J4731_02250;Name=J4731_02250;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_02250;pseudo=true
JAGETS010000006.1	Protein Homology	CDS	83277	84676	.	+	0	ID=cds-J4731_02250;Parent=gene-J4731_02250;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006658476.1;locus_tag=J4731_02250;product=FAD-binding oxidoreductase;pseudo=true;transl_table=11
JAGETS010000006.1	Genbank	pseudogene	84799	85297	.	+	.	ID=gene-J4731_02255;Name=J4731_02255;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_02255;pseudo=true
JAGETS010000006.1	Protein Homology	CDS	84799	85297	.	+	0	ID=cds-J4731_02255;Parent=gene-J4731_02255;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006658475.1;locus_tag=J4731_02255;product=RidA family protein;pseudo=true;transl_table=11
JAGETS010000006.1	Genbank	pseudogene	85524	86972	.	+	.	ID=gene-J4731_02260;Name=J4731_02260;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_02260;pseudo=true
JAGETS010000006.1	Protein Homology	CDS	85524	86972	.	+	0	ID=cds-J4731_02260;Parent=gene-J4731_02260;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006658474.1;locus_tag=J4731_02260;product=hypothetical protein;pseudo=true;transl_table=11
JAGETS010000006.1	Genbank	pseudogene	87165	87947	.	-	.	ID=gene-J4731_02265;Name=J4731_02265;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_02265;pseudo=true
JAGETS010000006.1	Protein Homology	CDS	87165	87947	.	-	0	ID=cds-J4731_02265;Parent=gene-J4731_02265;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004711829.1;locus_tag=J4731_02265;product=ATP-binding cassette domain-containing protein;pseudo=true;transl_table=11
JAGETS010000006.1	Genbank	pseudogene	87949	88826	.	-	.	ID=gene-J4731_02270;Name=J4731_02270;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_02270;pseudo=true
JAGETS010000006.1	Protein Homology	CDS	87949	88826	.	-	0	ID=cds-J4731_02270;Parent=gene-J4731_02270;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004699730.1;locus_tag=J4731_02270;product=iron chelate uptake ABC transporter family permease subunit;pseudo=true;transl_table=11
JAGETS010000006.1	Genbank	pseudogene	88905	89755	.	-	.	ID=gene-J4731_02275;Name=J4731_02275;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_02275;pseudo=true
JAGETS010000006.1	Protein Homology	CDS	88905	89755	.	-	0	ID=cds-J4731_02275;Parent=gene-J4731_02275;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014699692.1;locus_tag=J4731_02275;product=iron chelate uptake ABC transporter family permease subunit;pseudo=true;transl_table=11
JAGETS010000006.1	Genbank	pseudogene	89872	90831	.	-	.	ID=gene-J4731_02280;Name=J4731_02280;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_02280;pseudo=true
JAGETS010000006.1	Protein Homology	CDS	89872	90831	.	-	0	ID=cds-J4731_02280;Parent=gene-J4731_02280;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004259275.1;locus_tag=J4731_02280;product=siderophore ABC transporter substrate-binding protein;pseudo=true;transl_table=11
JAGETS010000006.1	Genbank	gene	91206	91442	.	-	.	ID=gene-J4731_02285;Name=J4731_02285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_02285
JAGETS010000006.1	Protein Homology	CDS	91206	91442	.	-	0	ID=cds-MBO1928662.1;Parent=gene-J4731_02285;Dbxref=NCBI_GP:MBO1928662.1;Name=MBO1928662.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004244929.1;locus_tag=J4731_02285;product=helix-turn-helix transcriptional regulator;protein_id=MBO1928662.1;transl_table=11
JAGETS010000006.1	Genbank	pseudogene	91492	92330	.	-	.	ID=gene-J4731_02290;Name=J4731_02290;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_02290;pseudo=true
JAGETS010000006.1	Protein Homology	CDS	91492	92330	.	-	0	ID=cds-J4731_02290;Parent=gene-J4731_02290;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004259287.1;locus_tag=J4731_02290;product=adhesin;pseudo=true;transl_table=11
JAGETS010000006.1	Genbank	gene	92348	92863	.	-	.	ID=gene-J4731_02295;Name=J4731_02295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_02295
JAGETS010000006.1	Protein Homology	CDS	92348	92863	.	-	0	ID=cds-MBO1928663.1;Parent=gene-J4731_02295;Dbxref=NCBI_GP:MBO1928663.1;Name=MBO1928663.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004259289.1;locus_tag=J4731_02295;product=fimbrial protein;protein_id=MBO1928663.1;transl_table=11
JAGETS010000006.1	Genbank	gene	92874	93347	.	-	.	ID=gene-J4731_02300;Name=J4731_02300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_02300
JAGETS010000006.1	Protein Homology	CDS	92874	93347	.	-	0	ID=cds-MBO1928664.1;Parent=gene-J4731_02300;Dbxref=NCBI_GP:MBO1928664.1;Name=MBO1928664.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004259291.1;locus_tag=J4731_02300;product=fimbrial protein;protein_id=MBO1928664.1;transl_table=11
JAGETS010000006.1	Genbank	pseudogene	93379	93918	.	-	.	ID=gene-J4731_02305;Name=J4731_02305;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_02305;pseudo=true
JAGETS010000006.1	Protein Homology	CDS	93379	93918	.	-	0	ID=cds-J4731_02305;Parent=gene-J4731_02305;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008912398.1;locus_tag=J4731_02305;product=fimbrial protein;pseudo=true;transl_table=11
JAGETS010000006.1	Genbank	gene	93911	94492	.	-	.	ID=gene-J4731_02310;Name=J4731_02310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_02310
JAGETS010000006.1	Protein Homology	CDS	93911	94492	.	-	0	ID=cds-MBO1928665.1;Parent=gene-J4731_02310;Dbxref=NCBI_GP:MBO1928665.1;Name=MBO1928665.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004259295.1;locus_tag=J4731_02310;product=type 1 fimbrial protein;protein_id=MBO1928665.1;transl_table=11
JAGETS010000006.1	Genbank	pseudogene	94506	95237	.	-	.	ID=gene-J4731_02315;Name=J4731_02315;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_02315;pseudo=true
JAGETS010000006.1	Protein Homology	CDS	94506	95237	.	-	0	ID=cds-J4731_02315;Parent=gene-J4731_02315;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004259296.1;locus_tag=J4731_02315;product=fimbria/pilus periplasmic chaperone;pseudo=true;transl_table=11
JAGETS010000006.1	Genbank	pseudogene	95351	97889	.	-	.	ID=gene-J4731_02320;Name=J4731_02320;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_02320;pseudo=true
JAGETS010000006.1	Protein Homology	CDS	95351	97889	.	-	0	ID=cds-J4731_02320;Parent=gene-J4731_02320;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004247328.1;locus_tag=J4731_02320;product=outer membrane usher protein;pseudo=true;transl_table=11
JAGETS010000006.1	Genbank	pseudogene	97997	98531	.	-	.	ID=gene-J4731_02325;Name=J4731_02325;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_02325;pseudo=true
JAGETS010000006.1	Protein Homology	CDS	97997	98531	.	-	0	ID=cds-J4731_02325;Parent=gene-J4731_02325;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004259299.1;locus_tag=J4731_02325;product=type 1 fimbrial protein;pseudo=true;transl_table=11
JAGETS010000006.1	Genbank	gene	98611	99141	.	-	.	ID=gene-J4731_02330;Name=J4731_02330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_02330
JAGETS010000006.1	Protein Homology	CDS	98611	99141	.	-	0	ID=cds-MBO1928666.1;Parent=gene-J4731_02330;Dbxref=NCBI_GP:MBO1928666.1;Name=MBO1928666.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004247325.1;locus_tag=J4731_02330;product=type 1 fimbrial protein;protein_id=MBO1928666.1;transl_table=11
JAGETS010000006.1	Genbank	pseudogene	100514	101661	.	-	.	ID=gene-J4731_02335;Name=J4731_02335;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_02335;pseudo=true
JAGETS010000006.1	Protein Homology	CDS	100514	101661	.	-	0	ID=cds-J4731_02335;Parent=gene-J4731_02335;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004259303.1;locus_tag=J4731_02335;product=helix-turn-helix domain-containing protein;pseudo=true;transl_table=11
JAGETS010000006.1	Genbank	pseudogene	101837	102968	.	-	.	ID=gene-J4731_02340;Name=J4731_02340;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_02340;pseudo=true
JAGETS010000006.1	Protein Homology	CDS	101837	102968	.	-	0	ID=cds-J4731_02340;Parent=gene-J4731_02340;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019104733.1;locus_tag=J4731_02340;product=glycerate kinase;pseudo=true;transl_table=11
JAGETS010000006.1	Genbank	pseudogene	103046	104359	.	-	.	ID=gene-J4731_02345;Name=J4731_02345;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_02345;pseudo=true
JAGETS010000006.1	Protein Homology	CDS	103046	104359	.	-	0	ID=cds-J4731_02345;Parent=gene-J4731_02345;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004259309.1;locus_tag=J4731_02345;product=MFS transporter;pseudo=true;transl_table=11
JAGETS010000006.1	Genbank	pseudogene	104494	105983	.	-	.	ID=gene-J4731_02350;Name=J4731_02350;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_02350;pseudo=true
JAGETS010000006.1	Protein Homology	CDS	104494	105983	.	-	0	ID=cds-J4731_02350;Parent=gene-J4731_02350;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013024468.1;locus_tag=J4731_02350;product=XylB;pseudo=true;transl_table=11
JAGETS010000006.1	Genbank	pseudogene	106004	107028	.	-	.	ID=gene-J4731_02355;Name=J4731_02355;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_02355;pseudo=true
JAGETS010000006.1	Protein Homology	CDS	106004	107028	.	-	0	ID=cds-J4731_02355;Parent=gene-J4731_02355;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014595246.1;locus_tag=J4731_02355;product=zinc-dependent dehydrogenase;pseudo=true;transl_table=11
JAGETS010000006.1	Genbank	pseudogene	107064	107863	.	-	.	ID=gene-J4731_02360;Name=J4731_02360;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_02360;pseudo=true
JAGETS010000006.1	Protein Homology	CDS	107064	107863	.	-	0	ID=cds-J4731_02360;Parent=gene-J4731_02360;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004259316.1;locus_tag=J4731_02360;product=fructose-bisphosphate aldolase;pseudo=true;transl_table=11
JAGETS010000006.1	Genbank	pseudogene	107894	108801	.	-	.	ID=gene-J4731_02365;Name=J4731_02365;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_02365;pseudo=true
JAGETS010000006.1	Protein Homology	CDS	107894	108801	.	-	0	ID=cds-J4731_02365;Parent=gene-J4731_02365;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014595244.1;locus_tag=J4731_02365;product=D-2-hydroxyacid dehydrogenase;pseudo=true;transl_table=11
JAGETS010000006.1	Genbank	pseudogene	109090	110335	.	-	.	ID=gene-J4731_02370;Name=J4731_02370;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_02370;pseudo=true
JAGETS010000006.1	Protein Homology	CDS	109090	110335	.	-	0	ID=cds-J4731_02370;Parent=gene-J4731_02370;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001561360.1;locus_tag=J4731_02370;product=amino acid deaminase;pseudo=true;transl_table=11
JAGETS010000006.1	Genbank	pseudogene	110335	111753	.	-	.	ID=gene-J4731_02375;Name=J4731_02375;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_02375;pseudo=true
JAGETS010000006.1	Protein Homology	CDS	110335	111753	.	-	0	ID=cds-J4731_02375;Parent=gene-J4731_02375;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015959378.1;locus_tag=J4731_02375;product=sodium:solute symporter family protein;pseudo=true;transl_table=11
JAGETS010000006.1	Genbank	pseudogene	111825	112213	.	-	.	ID=gene-J4731_02380;Name=J4731_02380;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_02380;pseudo=true
JAGETS010000006.1	Protein Homology	CDS	111825	112213	.	-	0	ID=cds-J4731_02380;Parent=gene-J4731_02380;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004259329.1;locus_tag=J4731_02380;product=RidA family protein;pseudo=true;transl_table=11
JAGETS010000006.1	Genbank	pseudogene	112227	113646	.	-	.	ID=gene-J4731_02385;Name=J4731_02385;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_02385;pseudo=true
JAGETS010000006.1	Protein Homology	CDS	112227	113646	.	-	0	ID=cds-J4731_02385;Parent=gene-J4731_02385;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004146938.1;locus_tag=J4731_02385;product=D-aminoacylase;pseudo=true;transl_table=11
JAGETS010000006.1	Genbank	pseudogene	113665	114284	.	-	.	ID=gene-J4731_02390;Name=J4731_02390;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_02390;pseudo=true
JAGETS010000006.1	Protein Homology	CDS	113665	114284	.	-	0	ID=cds-J4731_02390;Parent=gene-J4731_02390;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004259334.1;locus_tag=J4731_02390;product=2-dehydro-3-deoxy-6-phosphogalactonate aldolase;pseudo=true;transl_table=11
JAGETS010000006.1	Genbank	gene	114386	114550	.	-	.	ID=gene-J4731_02395;Name=J4731_02395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_02395
JAGETS010000006.1	GeneMarkS-2+	CDS	114386	114550	.	-	0	ID=cds-MBO1928667.1;Parent=gene-J4731_02395;Dbxref=NCBI_GP:MBO1928667.1;Name=MBO1928667.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_02395;product=hypothetical protein;protein_id=MBO1928667.1;transl_table=11
JAGETS010000006.1	Genbank	gene	114728	115027	.	-	.	ID=gene-J4731_02400;Name=J4731_02400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_02400
JAGETS010000006.1	Protein Homology	CDS	114728	115027	.	-	0	ID=cds-MBO1928668.1;Parent=gene-J4731_02400;Dbxref=NCBI_GP:MBO1928668.1;Name=MBO1928668.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004097088.1;locus_tag=J4731_02400;product=2-dehydro-3-deoxygalactonokinase;protein_id=MBO1928668.1;transl_table=11
JAGETS010000006.1	Genbank	gene	115170	115331	.	-	.	ID=gene-J4731_02405;Name=J4731_02405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_02405
JAGETS010000006.1	GeneMarkS-2+	CDS	115170	115331	.	-	0	ID=cds-MBO1928669.1;Parent=gene-J4731_02405;Dbxref=NCBI_GP:MBO1928669.1;Name=MBO1928669.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_02405;product=hypothetical protein;protein_id=MBO1928669.1;transl_table=11
JAGETS010000006.1	Genbank	pseudogene	115505	116326	.	+	.	ID=gene-J4731_02410;Name=J4731_02410;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_02410;pseudo=true
JAGETS010000006.1	Protein Homology	CDS	115505	116326	.	+	0	ID=cds-J4731_02410;Parent=gene-J4731_02410;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004259339.1;locus_tag=J4731_02410;product=IclR family transcriptional regulator;pseudo=true;transl_table=11
JAGETS010000006.1	Genbank	pseudogene	116441	117114	.	-	.	ID=gene-J4731_02415;Name=narI;gbkey=Gene;gene=narI;gene_biotype=pseudogene;locus_tag=J4731_02415;pseudo=true
JAGETS010000006.1	Protein Homology	CDS	116441	117114	.	-	0	ID=cds-J4731_02415;Parent=gene-J4731_02415;Note=frameshifted;gbkey=CDS;gene=narI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012368810.1;locus_tag=J4731_02415;product=respiratory nitrate reductase subunit gamma;pseudo=true;transl_table=11
JAGETS010000006.1	Genbank	pseudogene	117125	117826	.	-	.	ID=gene-J4731_02420;Name=narJ;gbkey=Gene;gene=narJ;gene_biotype=pseudogene;locus_tag=J4731_02420;pseudo=true
JAGETS010000006.1	Protein Homology	CDS	117125	117826	.	-	0	ID=cds-J4731_02420;Parent=gene-J4731_02420;Note=frameshifted;gbkey=CDS;gene=narJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004945782.1;locus_tag=J4731_02420;product=nitrate reductase molybdenum cofactor assembly chaperone;pseudo=true;transl_table=11
JAGETS010000006.1	Genbank	pseudogene	117823	119354	.	-	.	ID=gene-J4731_02425;Name=narH;gbkey=Gene;gene=narH;gene_biotype=pseudogene;locus_tag=J4731_02425;pseudo=true
JAGETS010000006.1	Protein Homology	CDS	117823	119354	.	-	0	ID=cds-J4731_02425;Parent=gene-J4731_02425;Note=frameshifted;gbkey=CDS;gene=narH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013203519.1;locus_tag=J4731_02425;product=nitrate reductase subunit beta;pseudo=true;transl_table=11
JAGETS010000006.1	Genbank	pseudogene	119354	123099	.	-	.	ID=gene-J4731_02430;Name=J4731_02430;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_02430;pseudo=true
JAGETS010000006.1	Protein Homology	CDS	119354	123099	.	-	0	ID=cds-J4731_02430;Parent=gene-J4731_02430;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309756.1;locus_tag=J4731_02430;product=nitrate reductase subunit alpha;pseudo=true;transl_table=11
JAGETS010000006.1	Genbank	pseudogene	123115	124497	.	-	.	ID=gene-J4731_02435;Name=J4731_02435;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_02435;pseudo=true
JAGETS010000006.1	Protein Homology	CDS	123115	124497	.	-	0	ID=cds-J4731_02435;Parent=gene-J4731_02435;Note=involved in the transport of nitrate and nitrite%3B frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015367088.1;locus_tag=J4731_02435;product=nitrate/nitrite transporter;pseudo=true;transl_table=11
JAGETS010000006.1	Genbank	pseudogene	124825	126560	.	+	.	ID=gene-J4731_02440;Name=narX;gbkey=Gene;gene=narX;gene_biotype=pseudogene;locus_tag=J4731_02440;pseudo=true
JAGETS010000006.1	Protein Homology	CDS	124825	126560	.	+	0	ID=cds-J4731_02440;Parent=gene-J4731_02440;Note=frameshifted;gbkey=CDS;gene=narX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004259358.1;locus_tag=J4731_02440;product=nitrate/nitrite two-component system sensor histidine kinase NarX;pseudo=true;transl_table=11
JAGETS010000006.1	Genbank	gene	126582	127238	.	+	.	ID=gene-J4731_02445;Name=narL;gbkey=Gene;gene=narL;gene_biotype=protein_coding;locus_tag=J4731_02445
JAGETS010000006.1	Protein Homology	CDS	126582	127238	.	+	0	ID=cds-MBO1928670.1;Parent=gene-J4731_02445;Dbxref=NCBI_GP:MBO1928670.1;Name=MBO1928670.1;gbkey=CDS;gene=narL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004259360.1;locus_tag=J4731_02445;product=two-component system response regulator NarL;protein_id=MBO1928670.1;transl_table=11
JAGETS010000006.1	Genbank	pseudogene	127251	128402	.	-	.	ID=gene-J4731_02450;Name=J4731_02450;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_02450;pseudo=true
JAGETS010000006.1	Protein Homology	CDS	127251	128402	.	-	0	ID=cds-J4731_02450;Parent=gene-J4731_02450;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004105443.1;locus_tag=J4731_02450;product=helix-turn-helix domain-containing protein;pseudo=true;transl_table=11
JAGETS010000006.1	Genbank	pseudogene	128425	129567	.	-	.	ID=gene-J4731_02455;Name=J4731_02455;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_02455;pseudo=true
JAGETS010000006.1	Protein Homology	CDS	128425	129567	.	-	0	ID=cds-J4731_02455;Parent=gene-J4731_02455;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226929.1;locus_tag=J4731_02455;product=glycerate kinase;pseudo=true;transl_table=11
JAGETS010000006.1	Genbank	pseudogene	129601	130894	.	-	.	ID=gene-J4731_02460;Name=J4731_02460;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_02460;pseudo=true
JAGETS010000006.1	Protein Homology	CDS	129601	130894	.	-	0	ID=cds-J4731_02460;Parent=gene-J4731_02460;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016809701.1;locus_tag=J4731_02460;product=MFS transporter;pseudo=true;transl_table=11
JAGETS010000006.1	Genbank	pseudogene	131041	132208	.	-	.	ID=gene-J4731_02465;Name=J4731_02465;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_02465;pseudo=true
JAGETS010000006.1	Protein Homology	CDS	131041	132208	.	-	0	ID=cds-J4731_02465;Parent=gene-J4731_02465;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226934.1;locus_tag=J4731_02465;product=thiolase family protein;pseudo=true;transl_table=11
JAGETS010000006.1	Genbank	pseudogene	132215	132949	.	-	.	ID=gene-J4731_02470;Name=fabG;gbkey=Gene;gene=fabG;gene_biotype=pseudogene;locus_tag=J4731_02470;pseudo=true
JAGETS010000006.1	Protein Homology	CDS	132215	132949	.	-	0	ID=cds-J4731_02470;Parent=gene-J4731_02470;Note=frameshifted;gbkey=CDS;gene=fabG;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226935.1;locus_tag=J4731_02470;product=3-oxoacyl-ACP reductase FabG;pseudo=true;transl_table=11
JAGETS010000006.1	Genbank	pseudogene	133010	134521	.	-	.	ID=gene-J4731_02475;Name=J4731_02475;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_02475;pseudo=true
JAGETS010000006.1	Protein Homology	CDS	133010	134521	.	-	0	ID=cds-J4731_02475;Parent=gene-J4731_02475;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226936.1;locus_tag=J4731_02475;product=acyl CoA:acetate/3-ketoacid CoA transferase;pseudo=true;transl_table=11
JAGETS010000006.1	Genbank	gene	134633	134875	.	-	.	ID=gene-J4731_02480;Name=J4731_02480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_02480
JAGETS010000006.1	Protein Homology	CDS	134633	134875	.	-	0	ID=cds-MBO1928671.1;Parent=gene-J4731_02480;Dbxref=NCBI_GP:MBO1928671.1;Name=MBO1928671.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024591.1;locus_tag=J4731_02480;product=hypothetical protein;protein_id=MBO1928671.1;transl_table=11
JAGETS010000006.1	Genbank	gene	134848	134943	.	-	.	ID=gene-J4731_02485;Name=J4731_02485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_02485
JAGETS010000006.1	Protein Homology	CDS	134848	134943	.	-	0	ID=cds-MBO1928672.1;Parent=gene-J4731_02485;Dbxref=NCBI_GP:MBO1928672.1;Name=MBO1928672.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012711.1;locus_tag=J4731_02485;product=hypothetical protein;protein_id=MBO1928672.1;transl_table=11
JAGETS010000006.1	Genbank	gene	134936	135598	.	-	.	ID=gene-J4731_02490;Name=J4731_02490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_02490
JAGETS010000006.1	Protein Homology	CDS	134936	135598	.	-	0	ID=cds-MBO1928673.1;Parent=gene-J4731_02490;Dbxref=NCBI_GP:MBO1928673.1;Name=MBO1928673.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012711.1;locus_tag=J4731_02490;product=AMP-binding protein;protein_id=MBO1928673.1;transl_table=11
JAGETS010000006.1	Genbank	gene	135742	135957	.	-	.	ID=gene-J4731_02495;Name=J4731_02495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_02495
JAGETS010000006.1	GeneMarkS-2+	CDS	135742	135957	.	-	0	ID=cds-MBO1928674.1;Parent=gene-J4731_02495;Dbxref=NCBI_GP:MBO1928674.1;Name=MBO1928674.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_02495;product=hypothetical protein;protein_id=MBO1928674.1;transl_table=11
JAGETS010000006.1	Genbank	pseudogene	136568	137417	.	+	.	ID=gene-J4731_02500;Name=yghU;gbkey=Gene;gene=yghU;gene_biotype=pseudogene;locus_tag=J4731_02500;pseudo=true
JAGETS010000006.1	Protein Homology	CDS	136568	137417	.	+	0	ID=cds-J4731_02500;Parent=gene-J4731_02500;Note=frameshifted;gbkey=CDS;gene=yghU;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017457501.1;locus_tag=J4731_02500;product=glutathione-dependent disulfide-bond oxidoreductase;pseudo=true;transl_table=11
JAGETS010000006.1	Genbank	pseudogene	137984	138414	.	+	.	ID=gene-J4731_02505;Name=J4731_02505;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_02505;pseudo=true
JAGETS010000006.1	Protein Homology	CDS	137984	138414	.	+	0	ID=cds-J4731_02505;Parent=gene-J4731_02505;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008912513.1;locus_tag=J4731_02505;product=helix-turn-helix transcriptional regulator;pseudo=true;transl_table=11
JAGETS010000006.1	Genbank	pseudogene	138377	138547	.	+	.	ID=gene-J4731_02510;Name=J4731_02510;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_02510;pseudo=true
JAGETS010000006.1	Protein Homology	CDS	138377	138547	.	+	0	ID=cds-J4731_02510;Parent=gene-J4731_02510;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013540.1;locus_tag=J4731_02510;product=helix-turn-helix transcriptional regulator;pseudo=true;transl_table=11
JAGETS010000006.1	Genbank	gene	138684	139220	.	+	.	ID=gene-J4731_02515;Name=J4731_02515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_02515
JAGETS010000006.1	Protein Homology	CDS	138684	139220	.	+	0	ID=cds-MBO1928675.1;Parent=gene-J4731_02515;Dbxref=NCBI_GP:MBO1928675.1;Name=MBO1928675.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014657973.1;locus_tag=J4731_02515;product=type 1 fimbrial protein;protein_id=MBO1928675.1;transl_table=11
JAGETS010000006.1	Genbank	pseudogene	139299	139817	.	+	.	ID=gene-J4731_02520;Name=J4731_02520;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_02520;pseudo=true
JAGETS010000006.1	Protein Homology	CDS	139299	139817	.	+	0	ID=cds-J4731_02520;Parent=gene-J4731_02520;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004259625.1;locus_tag=J4731_02520;product=type 1 fimbrial protein;pseudo=true;transl_table=11
JAGETS010000006.1	Genbank	pseudogene	139906	142411	.	+	.	ID=gene-J4731_02525;Name=J4731_02525;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_02525;pseudo=true
JAGETS010000006.1	Protein Homology	CDS	139906	142411	.	+	0	ID=cds-J4731_02525;Parent=gene-J4731_02525;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008913437.1;locus_tag=J4731_02525;product=outer membrane usher protein;pseudo=true;transl_table=11
JAGETS010000006.1	Genbank	gene	142598	142792	.	+	.	ID=gene-J4731_02530;Name=J4731_02530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_02530
JAGETS010000006.1	Protein Homology	CDS	142598	142792	.	+	0	ID=cds-MBO1928676.1;Parent=gene-J4731_02530;Dbxref=NCBI_GP:MBO1928676.1;Name=MBO1928676.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019842694.1;locus_tag=J4731_02530;product=fimbria/pilus periplasmic chaperone;protein_id=MBO1928676.1;transl_table=11
JAGETS010000006.1	Genbank	gene	142855	143031	.	+	.	ID=gene-J4731_02535;Name=J4731_02535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_02535
JAGETS010000006.1	Protein Homology	CDS	142855	143031	.	+	0	ID=cds-MBO1928677.1;Parent=gene-J4731_02535;Dbxref=NCBI_GP:MBO1928677.1;Name=MBO1928677.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012565.1;locus_tag=J4731_02535;product=fimbria/pilus periplasmic chaperone;protein_id=MBO1928677.1;transl_table=11
JAGETS010000006.1	Genbank	gene	143321	143476	.	+	.	ID=gene-J4731_02540;Name=J4731_02540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_02540
JAGETS010000006.1	GeneMarkS-2+	CDS	143321	143476	.	+	0	ID=cds-MBO1928678.1;Parent=gene-J4731_02540;Dbxref=NCBI_GP:MBO1928678.1;Name=MBO1928678.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_02540;product=hypothetical protein;protein_id=MBO1928678.1;transl_table=11
JAGETS010000006.1	Genbank	gene	144185	144424	.	+	.	ID=gene-J4731_02545;Name=J4731_02545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_02545
JAGETS010000006.1	GeneMarkS-2+	CDS	144185	144424	.	+	0	ID=cds-MBO1928679.1;Parent=gene-J4731_02545;Dbxref=NCBI_GP:MBO1928679.1;Name=MBO1928679.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_02545;product=hypothetical protein;protein_id=MBO1928679.1;transl_table=11
JAGETS010000006.1	Genbank	pseudogene	144951	145420	.	+	.	ID=gene-J4731_02550;Name=J4731_02550;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_02550;pseudo=true
JAGETS010000006.1	Protein Homology	CDS	144951	145420	.	+	0	ID=cds-J4731_02550;Parent=gene-J4731_02550;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014657979.1;locus_tag=J4731_02550;product=fimbrial protein;pseudo=true;transl_table=11
JAGETS010000006.1	Genbank	gene	145610	145807	.	+	.	ID=gene-J4731_02555;Name=J4731_02555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_02555
JAGETS010000006.1	GeneMarkS-2+	CDS	145610	145807	.	+	0	ID=cds-MBO1928680.1;Parent=gene-J4731_02555;Dbxref=NCBI_GP:MBO1928680.1;Name=MBO1928680.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_02555;product=hypothetical protein;protein_id=MBO1928680.1;transl_table=11
JAGETS010000006.1	Genbank	gene	146568	146834	.	+	.	ID=gene-J4731_02560;Name=J4731_02560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_02560
JAGETS010000006.1	GeneMarkS-2+	CDS	146568	146834	.	+	0	ID=cds-MBO1928681.1;Parent=gene-J4731_02560;Dbxref=NCBI_GP:MBO1928681.1;Name=MBO1928681.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_02560;product=hypothetical protein;protein_id=MBO1928681.1;transl_table=11
JAGETS010000006.1	Genbank	pseudogene	146978	148689	.	-	.	ID=gene-J4731_02565;Name=J4731_02565;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_02565;pseudo=true
JAGETS010000006.1	Protein Homology	CDS	146978	148689	.	-	0	ID=cds-J4731_02565;Parent=gene-J4731_02565;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015672287.1;locus_tag=J4731_02565;product=lysophospholipid acyltransferase family protein;pseudo=true;transl_table=11
JAGETS010000006.1	Genbank	pseudogene	149284	149714	.	+	.	ID=gene-J4731_02570;Name=J4731_02570;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_02570;pseudo=true
JAGETS010000006.1	Protein Homology	CDS	149284	149714	.	+	0	ID=cds-J4731_02570;Parent=gene-J4731_02570;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001785732.1;locus_tag=J4731_02570;product=heme-binding domain-containing protein;pseudo=true;transl_table=11
JAGETS010000006.1	Genbank	gene	149711	149950	.	+	.	ID=gene-J4731_02575;Name=J4731_02575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_02575
JAGETS010000006.1	GeneMarkS-2+	CDS	149711	149950	.	+	0	ID=cds-MBO1928682.1;Parent=gene-J4731_02575;Dbxref=NCBI_GP:MBO1928682.1;Name=MBO1928682.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_02575;product=hypothetical protein;protein_id=MBO1928682.1;transl_table=11
JAGETS010000006.1	Genbank	gene	149984	150163	.	+	.	ID=gene-J4731_02580;Name=J4731_02580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_02580
JAGETS010000006.1	Protein Homology	CDS	149984	150163	.	+	0	ID=cds-MBO1928683.1;Parent=gene-J4731_02580;Dbxref=NCBI_GP:MBO1928683.1;Name=MBO1928683.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015131.1;locus_tag=J4731_02580;product=cytochrome-c peroxidase;protein_id=MBO1928683.1;transl_table=11
JAGETS010000006.1	Genbank	pseudogene	150203	150655	.	+	.	ID=gene-J4731_02585;Name=J4731_02585;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_02585;pseudo=true
JAGETS010000006.1	Protein Homology	CDS	150203	150655	.	+	0	ID=cds-J4731_02585;Parent=gene-J4731_02585;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001213780.1;locus_tag=J4731_02585;product=c-type cytochrome;pseudo=true;transl_table=11
JAGETS010000006.1	Genbank	pseudogene	150718	151341	.	-	.	ID=gene-J4731_02590;Name=dmsD;gbkey=Gene;gene=dmsD;gene_biotype=pseudogene;locus_tag=J4731_02590;pseudo=true
JAGETS010000006.1	Protein Homology	CDS	150718	151341	.	-	0	ID=cds-J4731_02590;Parent=gene-J4731_02590;Note=frameshifted;gbkey=CDS;gene=dmsD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004259468.1;locus_tag=J4731_02590;product=Tat proofreading chaperone DmsD;pseudo=true;transl_table=11
JAGETS010000006.1	Genbank	pseudogene	151405	152255	.	-	.	ID=gene-J4731_02595;Name=J4731_02595;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_02595;pseudo=true
JAGETS010000006.1	Protein Homology	CDS	151405	152255	.	-	0	ID=cds-J4731_02595;Parent=gene-J4731_02595;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000534637.1;locus_tag=J4731_02595;product=dimethyl sulfoxide reductase anchor subunit family protein;pseudo=true;transl_table=11
JAGETS010000006.1	Genbank	pseudogene	152265	152867	.	-	.	ID=gene-J4731_02600;Name=dmsB;gbkey=Gene;gene=dmsB;gene_biotype=pseudogene;locus_tag=J4731_02600;pseudo=true
JAGETS010000006.1	Protein Homology	CDS	152265	152867	.	-	0	ID=cds-J4731_02600;Parent=gene-J4731_02600;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;gene=dmsB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000213046.1;locus_tag=J4731_02600;product=dimethylsulfoxide reductase subunit B;pseudo=true;transl_table=11
JAGETS010000006.1	Genbank	pseudogene	152879	155237	.	-	.	ID=gene-J4731_02605;Name=J4731_02605;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_02605;pseudo=true
JAGETS010000006.1	Protein Homology	CDS	152879	155237	.	-	0	ID=cds-J4731_02605;Parent=gene-J4731_02605;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008912371.1;locus_tag=J4731_02605;product=molybdopterin-dependent oxidoreductase;pseudo=true;transl_table=11
JAGETS010000006.1	Genbank	pseudogene	155698	156421	.	-	.	ID=gene-J4731_02610;Name=J4731_02610;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_02610;pseudo=true
JAGETS010000006.1	Protein Homology	CDS	155698	156421	.	-	0	ID=cds-J4731_02610;Parent=gene-J4731_02610;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004714190.1;locus_tag=J4731_02610;product=SDR family oxidoreductase;pseudo=true;transl_table=11
JAGETS010000006.1	Genbank	pseudogene	156437	156687	.	-	.	ID=gene-J4731_02615;Name=J4731_02615;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_02615;pseudo=true
JAGETS010000006.1	Protein Homology	CDS	156437	156687	.	-	0	ID=cds-J4731_02615;Parent=gene-J4731_02615;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004259523.1;locus_tag=J4731_02615;product=acyl carrier protein;pseudo=true;transl_table=11
JAGETS010000006.1	Genbank	gene	156778	157005	.	-	.	ID=gene-J4731_02620;Name=J4731_02620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_02620
JAGETS010000006.1	GeneMarkS-2+	CDS	156778	157005	.	-	0	ID=cds-MBO1928684.1;Parent=gene-J4731_02620;Dbxref=NCBI_GP:MBO1928684.1;Name=MBO1928684.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_02620;product=hypothetical protein;protein_id=MBO1928684.1;transl_table=11
JAGETS010000006.1	Genbank	gene	157131	157388	.	-	.	ID=gene-J4731_02625;Name=J4731_02625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_02625
JAGETS010000006.1	GeneMarkS-2+	CDS	157131	157388	.	-	0	ID=cds-MBO1928685.1;Parent=gene-J4731_02625;Dbxref=NCBI_GP:MBO1928685.1;Name=MBO1928685.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_02625;product=hypothetical protein;protein_id=MBO1928685.1;transl_table=11
JAGETS010000006.1	Genbank	pseudogene	157504	158779	.	-	.	ID=gene-J4731_02630;Name=J4731_02630;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_02630;pseudo=true
JAGETS010000006.1	Protein Homology	CDS	157504	158779	.	-	0	ID=cds-J4731_02630;Parent=gene-J4731_02630;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001664962.1;locus_tag=J4731_02630;product=beta-ketoacyl-[acyl-carrier-protein] synthase family protein;pseudo=true;transl_table=11
JAGETS010000006.1	Genbank	pseudogene	158742	160148	.	-	.	ID=gene-J4731_02635;Name=J4731_02635;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_02635;pseudo=true
JAGETS010000006.1	Protein Homology	CDS	158742	160148	.	-	0	ID=cds-J4731_02635;Parent=gene-J4731_02635;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015966123.1;locus_tag=J4731_02635;product=efflux transporter outer membrane subunit;pseudo=true;transl_table=11
JAGETS010000006.1	Genbank	pseudogene	160151	162104	.	-	.	ID=gene-J4731_02640;Name=J4731_02640;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_02640;pseudo=true
JAGETS010000006.1	Protein Homology	CDS	160151	162104	.	-	0	ID=cds-J4731_02640;Parent=gene-J4731_02640;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017374471.1;locus_tag=J4731_02640;product=ABC transporter permease;pseudo=true;transl_table=11
JAGETS010000006.1	Genbank	pseudogene	162107	163247	.	-	.	ID=gene-J4731_02645;Name=J4731_02645;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_02645;pseudo=true
JAGETS010000006.1	Protein Homology	CDS	162107	163247	.	-	0	ID=cds-J4731_02645;Parent=gene-J4731_02645;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017145493.1;locus_tag=J4731_02645;product=efflux RND transporter periplasmic adaptor subunit;pseudo=true;transl_table=11
JAGETS010000006.1	Genbank	pseudogene	163310	165436	.	-	.	ID=gene-J4731_02650;Name=J4731_02650;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_02650;pseudo=true
JAGETS010000006.1	Protein Homology	CDS	163310	165436	.	-	0	ID=cds-J4731_02650;Parent=gene-J4731_02650;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010427792.1;locus_tag=J4731_02650;product=ATP-binding cassette domain-containing protein;pseudo=true;transl_table=11
JAGETS010000006.1	Genbank	pseudogene	165451	166397	.	-	.	ID=gene-J4731_02655;Name=J4731_02655;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_02655;pseudo=true
JAGETS010000006.1	Protein Homology	CDS	165451	166397	.	-	0	ID=cds-J4731_02655;Parent=gene-J4731_02655;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004104910.1;locus_tag=J4731_02655;product=ABC transporter;pseudo=true;transl_table=11
JAGETS010000006.1	Genbank	pseudogene	166394	167123	.	-	.	ID=gene-J4731_02660;Name=J4731_02660;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_02660;pseudo=true
JAGETS010000006.1	Protein Homology	CDS	166394	167123	.	-	0	ID=cds-J4731_02660;Parent=gene-J4731_02660;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015966118.1;locus_tag=J4731_02660;product=DsbA family protein;pseudo=true;transl_table=11
JAGETS010000006.1	Genbank	gene	167153	167350	.	-	.	ID=gene-J4731_02665;Name=J4731_02665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_02665
JAGETS010000006.1	Protein Homology	CDS	167153	167350	.	-	0	ID=cds-MBO1928686.1;Parent=gene-J4731_02665;Dbxref=NCBI_GP:MBO1928686.1;Name=MBO1928686.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004104922.1;locus_tag=J4731_02665;product=DUF4762 domain-containing protein;protein_id=MBO1928686.1;transl_table=11
JAGETS010000006.1	Genbank	gene	167460	167639	.	-	.	ID=gene-J4731_02670;Name=J4731_02670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_02670
JAGETS010000006.1	GeneMarkS-2+	CDS	167460	167639	.	-	0	ID=cds-MBO1928687.1;Parent=gene-J4731_02670;Dbxref=NCBI_GP:MBO1928687.1;Name=MBO1928687.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_02670;product=hypothetical protein;protein_id=MBO1928687.1;transl_table=11
JAGETS010000006.1	Genbank	gene	167890	168435	.	-	.	ID=gene-J4731_02675;Name=J4731_02675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_02675
JAGETS010000006.1	Protein Homology	CDS	167890	168435	.	-	0	ID=cds-MBO1928688.1;Parent=gene-J4731_02675;Dbxref=NCBI_GP:MBO1928688.1;Name=MBO1928688.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016800.1;locus_tag=J4731_02675;product=O-antigen ligase family protein;protein_id=MBO1928688.1;transl_table=11
JAGETS010000006.1	Genbank	gene	168516	168770	.	+	.	ID=gene-J4731_02680;Name=J4731_02680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_02680
JAGETS010000006.1	GeneMarkS-2+	CDS	168516	168770	.	+	0	ID=cds-MBO1928689.1;Parent=gene-J4731_02680;Dbxref=NCBI_GP:MBO1928689.1;Name=MBO1928689.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_02680;product=hypothetical protein;protein_id=MBO1928689.1;transl_table=11
JAGETS010000006.1	Genbank	gene	169122	169646	.	-	.	ID=gene-J4731_02685;Name=J4731_02685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_02685
JAGETS010000006.1	Protein Homology	CDS	169122	169646	.	-	0	ID=cds-MBO1928690.1;Parent=gene-J4731_02685;Dbxref=NCBI_GP:MBO1928690.1;Name=MBO1928690.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012635.1;locus_tag=J4731_02685;product=type 1 fimbrial protein;protein_id=MBO1928690.1;transl_table=11
JAGETS010000006.1	Genbank	gene	169891	170382	.	-	.	ID=gene-J4731_02690;Name=J4731_02690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_02690
JAGETS010000006.1	Protein Homology	CDS	169891	170382	.	-	0	ID=cds-MBO1928691.1;Parent=gene-J4731_02690;Dbxref=NCBI_GP:MBO1928691.1;Name=MBO1928691.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012635.1;locus_tag=J4731_02690;product=fimbrial protein;protein_id=MBO1928691.1;transl_table=11
JAGETS010000006.1	Genbank	gene	170388	170564	.	-	.	ID=gene-J4731_02695;Name=J4731_02695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_02695
JAGETS010000006.1	GeneMarkS-2+	CDS	170388	170564	.	-	0	ID=cds-MBO1928692.1;Parent=gene-J4731_02695;Dbxref=NCBI_GP:MBO1928692.1;Name=MBO1928692.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_02695;product=hypothetical protein;protein_id=MBO1928692.1;transl_table=11
JAGETS010000006.1	Genbank	gene	170807	171385	.	-	.	ID=gene-J4731_02700;Name=J4731_02700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_02700
JAGETS010000006.1	Protein Homology	CDS	170807	171385	.	-	0	ID=cds-MBO1928693.1;Parent=gene-J4731_02700;Dbxref=NCBI_GP:MBO1928693.1;Name=MBO1928693.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012635.1;locus_tag=J4731_02700;product=type 1 fimbrial protein;protein_id=MBO1928693.1;transl_table=11
JAGETS010000006.1	Genbank	pseudogene	171425	172167	.	-	.	ID=gene-J4731_02705;Name=J4731_02705;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_02705;pseudo=true
JAGETS010000006.1	Protein Homology	CDS	171425	172167	.	-	0	ID=cds-J4731_02705;Parent=gene-J4731_02705;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004259578.1;locus_tag=J4731_02705;product=fimbria/pilus periplasmic chaperone;pseudo=true;transl_table=11
JAGETS010000006.1	Genbank	pseudogene	172207	174580	.	-	.	ID=gene-J4731_02710;Name=J4731_02710;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_02710;pseudo=true
JAGETS010000006.1	Protein Homology	CDS	172207	174580	.	-	0	ID=cds-J4731_02710;Parent=gene-J4731_02710;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015703383.1;locus_tag=J4731_02710;product=fimbria/pilus outer membrane usher protein;pseudo=true;transl_table=11
JAGETS010000006.1	Genbank	gene	174733	175173	.	-	.	ID=gene-J4731_02715;Name=J4731_02715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_02715
JAGETS010000006.1	GeneMarkS-2+	CDS	174733	175173	.	-	0	ID=cds-MBO1928694.1;Parent=gene-J4731_02715;Dbxref=NCBI_GP:MBO1928694.1;Name=MBO1928694.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_02715;product=type 1 fimbrial protein;protein_id=MBO1928694.1;transl_table=11
JAGETS010000006.1	Genbank	pseudogene	175354	175895	.	-	.	ID=gene-J4731_02720;Name=J4731_02720;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_02720;pseudo=true
JAGETS010000006.1	Protein Homology	CDS	175354	175895	.	-	0	ID=cds-J4731_02720;Parent=gene-J4731_02720;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004259591.1;locus_tag=J4731_02720;product=fimbrial protein;pseudo=true;transl_table=11
JAGETS010000006.1	Genbank	gene	176246	176398	.	-	.	ID=gene-J4731_02725;Name=J4731_02725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_02725
JAGETS010000006.1	Protein Homology	CDS	176246	176398	.	-	0	ID=cds-MBO1928695.1;Parent=gene-J4731_02725;Dbxref=NCBI_GP:MBO1928695.1;Name=MBO1928695.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008913147.1;locus_tag=J4731_02725;product=helix-turn-helix domain-containing protein;protein_id=MBO1928695.1;transl_table=11
JAGETS010000006.1	Genbank	pseudogene	177072	177676	.	-	.	ID=gene-J4731_02730;Name=J4731_02730;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_02730;pseudo=true
JAGETS010000006.1	Protein Homology	CDS	177072	177676	.	-	0	ID=cds-J4731_02730;Parent=gene-J4731_02730;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004259599.1;locus_tag=J4731_02730;product=sulfoxide reductase heme-binding subunit YedZ;pseudo=true;transl_table=11
JAGETS010000006.1	Genbank	pseudogene	177676	178621	.	-	.	ID=gene-J4731_02735;Name=msrP;gbkey=Gene;gene=msrP;gene_biotype=pseudogene;locus_tag=J4731_02735;pseudo=true
JAGETS010000006.1	Protein Homology	CDS	177676	178621	.	-	0	ID=cds-J4731_02735;Parent=gene-J4731_02735;Note=frameshifted;gbkey=CDS;gene=msrP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006533599.1;locus_tag=J4731_02735;product=protein-methionine-sulfoxide reductase catalytic subunit MsrP;pseudo=true;transl_table=11
JAGETS010000006.1	Genbank	pseudogene	178765	180125	.	-	.	ID=gene-J4731_02740;Name=J4731_02740;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_02740;pseudo=true
JAGETS010000006.1	Protein Homology	CDS	178765	180125	.	-	0	ID=cds-J4731_02740;Parent=gene-J4731_02740;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006659741.1;locus_tag=J4731_02740;product=two-component sensor histidine kinase;pseudo=true;transl_table=11
JAGETS010000006.1	Genbank	pseudogene	180122	180792	.	-	.	ID=gene-J4731_02745;Name=J4731_02745;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_02745;pseudo=true
JAGETS010000006.1	Protein Homology	CDS	180122	180792	.	-	0	ID=cds-J4731_02745;Parent=gene-J4731_02745;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004259607.1;locus_tag=J4731_02745;product=heavy metal response regulator transcription factor;pseudo=true;transl_table=11
JAGETS010000006.1	Genbank	pseudogene	181232	181776	.	+	.	ID=gene-J4731_02750;Name=J4731_02750;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_02750;pseudo=true
JAGETS010000006.1	Protein Homology	CDS	181232	181776	.	+	0	ID=cds-J4731_02750;Parent=gene-J4731_02750;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001389837.1;locus_tag=J4731_02750;product=tyrosine-type recombinase/integrase;pseudo=true;transl_table=11
JAGETS010000006.1	Genbank	gene	182217	182504	.	+	.	ID=gene-J4731_02755;Name=J4731_02755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_02755
JAGETS010000006.1	Protein Homology	CDS	182217	182504	.	+	0	ID=cds-MBO1928696.1;Parent=gene-J4731_02755;Dbxref=NCBI_GP:MBO1928696.1;Name=MBO1928696.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004259612.1;locus_tag=J4731_02755;product=helix-turn-helix transcriptional regulator;protein_id=MBO1928696.1;transl_table=11
JAGETS010000006.1	Genbank	pseudogene	182515	182729	.	+	.	ID=gene-J4731_02760;Name=J4731_02760;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_02760;pseudo=true
JAGETS010000006.1	Protein Homology	CDS	182515	182729	.	+	0	ID=cds-J4731_02760;Parent=gene-J4731_02760;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004918240.1;locus_tag=J4731_02760;product=helix-turn-helix transcriptional regulator;pseudo=true;transl_table=11
JAGETS010000006.1	Genbank	pseudogene	182904	183439	.	+	.	ID=gene-J4731_02765;Name=J4731_02765;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_02765;pseudo=true
JAGETS010000006.1	Protein Homology	CDS	182904	183439	.	+	0	ID=cds-J4731_02765;Parent=gene-J4731_02765;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014657973.1;locus_tag=J4731_02765;product=type 1 fimbrial protein;pseudo=true;transl_table=11
JAGETS010000006.1	Genbank	pseudogene	183506	184041	.	+	.	ID=gene-J4731_02770;Name=J4731_02770;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_02770;pseudo=true
JAGETS010000006.1	Protein Homology	CDS	183506	184041	.	+	0	ID=cds-J4731_02770;Parent=gene-J4731_02770;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004259625.1;locus_tag=J4731_02770;product=type 1 fimbrial protein;pseudo=true;transl_table=11
JAGETS010000006.1	Genbank	pseudogene	184133	186793	.	+	.	ID=gene-J4731_02775;Name=J4731_02775;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_02775;pseudo=true
JAGETS010000006.1	Protein Homology	CDS	184133	186793	.	+	0	ID=cds-J4731_02775;Parent=gene-J4731_02775;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004918248.1;locus_tag=J4731_02775;product=outer membrane usher protein;pseudo=true;transl_table=11
JAGETS010000006.1	Genbank	pseudogene	186852	187641	.	+	.	ID=gene-J4731_02780;Name=J4731_02780;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_02780;pseudo=true
JAGETS010000006.1	Protein Homology	CDS	186852	187641	.	+	0	ID=cds-J4731_02780;Parent=gene-J4731_02780;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004918250.1;locus_tag=J4731_02780;product=fimbria/pilus periplasmic chaperone;pseudo=true;transl_table=11
JAGETS010000006.1	Genbank	pseudogene	187671	188268	.	+	.	ID=gene-J4731_02785;Name=J4731_02785;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_02785;pseudo=true
JAGETS010000006.1	Protein Homology	CDS	187671	188268	.	+	0	ID=cds-J4731_02785;Parent=gene-J4731_02785;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004259635.1;locus_tag=J4731_02785;product=type 1 fimbrial protein;pseudo=true;transl_table=11
JAGETS010000006.1	Genbank	pseudogene	188849	189307	.	+	.	ID=gene-J4731_02790;Name=J4731_02790;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_02790;pseudo=true
JAGETS010000006.1	Protein Homology	CDS	188849	189307	.	+	0	ID=cds-J4731_02790;Parent=gene-J4731_02790;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004259640.1;locus_tag=J4731_02790;product=fimbrial protein;pseudo=true;transl_table=11
JAGETS010000006.1	Genbank	pseudogene	189346	189818	.	+	.	ID=gene-J4731_02795;Name=J4731_02795;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_02795;pseudo=true
JAGETS010000006.1	Protein Homology	CDS	189346	189818	.	+	0	ID=cds-J4731_02795;Parent=gene-J4731_02795;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014657979.1;locus_tag=J4731_02795;product=fimbrial protein;pseudo=true;transl_table=11
JAGETS010000006.1	Genbank	pseudogene	189836	190356	.	+	.	ID=gene-J4731_02800;Name=J4731_02800;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_02800;pseudo=true
JAGETS010000006.1	Protein Homology	CDS	189836	190356	.	+	0	ID=cds-J4731_02800;Parent=gene-J4731_02800;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004918261.1;locus_tag=J4731_02800;product=type 1 fimbrial protein;pseudo=true;transl_table=11
JAGETS010000006.1	Genbank	pseudogene	190367	191221	.	+	.	ID=gene-J4731_02805;Name=J4731_02805;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_02805;pseudo=true
JAGETS010000006.1	Protein Homology	CDS	190367	191221	.	+	0	ID=cds-J4731_02805;Parent=gene-J4731_02805;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004918264.1;locus_tag=J4731_02805;product=hypothetical protein;pseudo=true;transl_table=11
JAGETS010000006.1	Genbank	gene	191323	191460	.	-	.	ID=gene-J4731_02810;Name=J4731_02810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_02810
JAGETS010000006.1	GeneMarkS-2+	CDS	191323	191460	.	-	0	ID=cds-MBO1928697.1;Parent=gene-J4731_02810;Dbxref=NCBI_GP:MBO1928697.1;Name=MBO1928697.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_02810;product=hypothetical protein;protein_id=MBO1928697.1;transl_table=11
JAGETS010000006.1	Genbank	pseudogene	191837	192200	.	+	.	ID=gene-J4731_02815;Name=J4731_02815;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_02815;pseudo=true
JAGETS010000006.1	Protein Homology	CDS	191837	192200	.	+	0	ID=cds-J4731_02815;Parent=gene-J4731_02815;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001736264.1;locus_tag=J4731_02815;product=MarR family transcriptional regulator;pseudo=true;transl_table=11
JAGETS010000006.1	Genbank	gene	192383	192925	.	-	.	ID=gene-J4731_02820;Name=J4731_02820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_02820
JAGETS010000006.1	Protein Homology	CDS	192383	192925	.	-	0	ID=cds-MBO1928698.1;Parent=gene-J4731_02820;Dbxref=NCBI_GP:MBO1928698.1;Name=MBO1928698.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013088.1;locus_tag=J4731_02820;product=DMT family transporter;protein_id=MBO1928698.1;transl_table=11
JAGETS010000006.1	Genbank	gene	193146	193352	.	-	.	ID=gene-J4731_02825;Name=J4731_02825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_02825
JAGETS010000006.1	GeneMarkS-2+	CDS	193146	193352	.	-	0	ID=cds-MBO1928699.1;Parent=gene-J4731_02825;Dbxref=NCBI_GP:MBO1928699.1;Name=MBO1928699.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_02825;product=hypothetical protein;protein_id=MBO1928699.1;transl_table=11
JAGETS010000006.1	Genbank	gene	193571	194086	.	+	.	ID=gene-J4731_02830;Name=J4731_02830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_02830
JAGETS010000006.1	Protein Homology	CDS	193571	194086	.	+	0	ID=cds-MBO1928700.1;Parent=gene-J4731_02830;Dbxref=NCBI_GP:MBO1928700.1;Name=MBO1928700.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015563.1;locus_tag=J4731_02830;product=hypothetical protein;protein_id=MBO1928700.1;transl_table=11
JAGETS010000006.1	Genbank	gene	194052	194516	.	+	.	ID=gene-J4731_02835;Name=J4731_02835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_02835
JAGETS010000006.1	GeneMarkS-2+	CDS	194052	194516	.	+	0	ID=cds-MBO1928701.1;Parent=gene-J4731_02835;Dbxref=NCBI_GP:MBO1928701.1;Name=MBO1928701.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_02835;product=hypothetical protein;protein_id=MBO1928701.1;transl_table=11
JAGETS010000006.1	Genbank	gene	194483	194845	.	+	.	ID=gene-J4731_02840;Name=J4731_02840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_02840
JAGETS010000006.1	Protein Homology	CDS	194483	194845	.	+	0	ID=cds-MBO1928702.1;Parent=gene-J4731_02840;Dbxref=NCBI_GP:MBO1928702.1;Name=MBO1928702.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015563.1;locus_tag=J4731_02840;product=hypothetical protein;protein_id=MBO1928702.1;transl_table=11
JAGETS010000006.1	Genbank	gene	194808	194924	.	+	.	ID=gene-J4731_02845;Name=J4731_02845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_02845
JAGETS010000006.1	Protein Homology	CDS	194808	194924	.	+	0	ID=cds-MBO1928703.1;Parent=gene-J4731_02845;Dbxref=NCBI_GP:MBO1928703.1;Name=MBO1928703.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015563.1;locus_tag=J4731_02845;product=hypothetical protein;protein_id=MBO1928703.1;transl_table=11
JAGETS010000006.1	Genbank	pseudogene	194951	196246	.	+	.	ID=gene-J4731_02850;Name=J4731_02850;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_02850;pseudo=true
JAGETS010000006.1	Protein Homology	CDS	194951	196246	.	+	0	ID=cds-J4731_02850;Parent=gene-J4731_02850;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000214363.1;locus_tag=J4731_02850;product=amidohydrolase;pseudo=true;transl_table=11
JAGETS010000006.1	Genbank	gene	196452	196916	.	+	.	ID=gene-J4731_02855;Name=J4731_02855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_02855
JAGETS010000006.1	Protein Homology	CDS	196452	196916	.	+	0	ID=cds-MBO1928704.1;Parent=gene-J4731_02855;Dbxref=NCBI_GP:MBO1928704.1;Name=MBO1928704.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000822020.1;locus_tag=J4731_02855;product=asparaginase;protein_id=MBO1928704.1;transl_table=11
JAGETS010000006.1	Genbank	gene	197810	198262	.	-	.	ID=gene-J4731_02860;Name=J4731_02860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_02860
JAGETS010000006.1	GeneMarkS-2+	CDS	197810	198262	.	-	0	ID=cds-MBO1928705.1;Parent=gene-J4731_02860;Dbxref=NCBI_GP:MBO1928705.1;Name=MBO1928705.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_02860;product=hypothetical protein;protein_id=MBO1928705.1;transl_table=11
JAGETS010000006.1	Genbank	gene	198296	198466	.	-	.	ID=gene-J4731_02865;Name=J4731_02865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_02865
JAGETS010000006.1	GeneMarkS-2+	CDS	198296	198466	.	-	0	ID=cds-MBO1928706.1;Parent=gene-J4731_02865;Dbxref=NCBI_GP:MBO1928706.1;Name=MBO1928706.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_02865;product=hypothetical protein;protein_id=MBO1928706.1;transl_table=11
JAGETS010000006.1	Genbank	gene	198444	198686	.	-	.	ID=gene-J4731_02870;Name=J4731_02870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_02870
JAGETS010000006.1	GeneMarkS-2+	CDS	198444	198686	.	-	0	ID=cds-MBO1928707.1;Parent=gene-J4731_02870;Dbxref=NCBI_GP:MBO1928707.1;Name=MBO1928707.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_02870;product=hypothetical protein;protein_id=MBO1928707.1;transl_table=11
JAGETS010000006.1	Genbank	gene	198823	199059	.	-	.	ID=gene-J4731_02875;Name=J4731_02875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_02875
JAGETS010000006.1	GeneMarkS-2+	CDS	198823	199059	.	-	0	ID=cds-MBO1928708.1;Parent=gene-J4731_02875;Dbxref=NCBI_GP:MBO1928708.1;Name=MBO1928708.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_02875;product=hypothetical protein;protein_id=MBO1928708.1;transl_table=11
JAGETS010000006.1	Genbank	gene	199183	199464	.	-	.	ID=gene-J4731_02880;Name=J4731_02880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_02880
JAGETS010000006.1	GeneMarkS-2+	CDS	199183	199464	.	-	0	ID=cds-MBO1928709.1;Parent=gene-J4731_02880;Dbxref=NCBI_GP:MBO1928709.1;Name=MBO1928709.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_02880;product=hypothetical protein;protein_id=MBO1928709.1;transl_table=11
JAGETS010000006.1	Genbank	gene	199498	199662	.	-	.	ID=gene-J4731_02885;Name=J4731_02885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_02885
JAGETS010000006.1	GeneMarkS-2+	CDS	199498	199662	.	-	0	ID=cds-MBO1928710.1;Parent=gene-J4731_02885;Dbxref=NCBI_GP:MBO1928710.1;Name=MBO1928710.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_02885;product=hypothetical protein;protein_id=MBO1928710.1;transl_table=11
JAGETS010000006.1	Genbank	gene	199659	199847	.	-	.	ID=gene-J4731_02890;Name=J4731_02890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_02890
JAGETS010000006.1	GeneMarkS-2+	CDS	199659	199847	.	-	0	ID=cds-MBO1928711.1;Parent=gene-J4731_02890;Dbxref=NCBI_GP:MBO1928711.1;Name=MBO1928711.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_02890;product=hypothetical protein;protein_id=MBO1928711.1;transl_table=11
JAGETS010000006.1	Genbank	gene	200044	200196	.	-	.	ID=gene-J4731_02895;Name=J4731_02895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_02895
JAGETS010000006.1	GeneMarkS-2+	CDS	200044	200196	.	-	0	ID=cds-MBO1928712.1;Parent=gene-J4731_02895;Dbxref=NCBI_GP:MBO1928712.1;Name=MBO1928712.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_02895;product=hypothetical protein;protein_id=MBO1928712.1;transl_table=11
JAGETS010000006.1	Genbank	pseudogene	200265	201845	.	-	.	ID=gene-J4731_02900;Name=J4731_02900;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_02900;pseudo=true
JAGETS010000006.1	Protein Homology	CDS	200265	201845	.	-	0	ID=cds-J4731_02900;Parent=gene-J4731_02900;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122999.1;locus_tag=J4731_02900;product=D-aminoacylase;pseudo=true;transl_table=11
JAGETS010000006.1	Genbank	pseudogene	201897	203075	.	-	.	ID=gene-J4731_02905;Name=J4731_02905;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_02905;pseudo=true
JAGETS010000006.1	Protein Homology	CDS	201897	203075	.	-	0	ID=cds-J4731_02905;Parent=gene-J4731_02905;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004259679.1;locus_tag=J4731_02905;product=YgeY family selenium metabolism-linked hydrolase;pseudo=true;transl_table=11
JAGETS010000006.1	Genbank	pseudogene	203090	204298	.	-	.	ID=gene-J4731_02910;Name=dpaL;gbkey=Gene;gene=dpaL;gene_biotype=pseudogene;locus_tag=J4731_02910;pseudo=true
JAGETS010000006.1	Protein Homology	CDS	203090	204298	.	-	0	ID=cds-J4731_02910;Parent=gene-J4731_02910;Note=frameshifted;gbkey=CDS;gene=dpaL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004259682.1;locus_tag=J4731_02910;product=diaminopropionate ammonia-lyase;pseudo=true;transl_table=11
JAGETS010000006.1	Genbank	gene	204642	204923	.	+	.	ID=gene-J4731_02915;Name=J4731_02915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_02915
JAGETS010000006.1	GeneMarkS-2+	CDS	204642	204923	.	+	0	ID=cds-MBO1928713.1;Parent=gene-J4731_02915;Dbxref=NCBI_GP:MBO1928713.1;Name=MBO1928713.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_02915;product=hypothetical protein;protein_id=MBO1928713.1;transl_table=11
JAGETS010000006.1	Genbank	gene	205151	205390	.	+	.	ID=gene-J4731_02920;Name=J4731_02920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_02920
JAGETS010000006.1	GeneMarkS-2+	CDS	205151	205390	.	+	0	ID=cds-MBO1928714.1;Parent=gene-J4731_02920;Dbxref=NCBI_GP:MBO1928714.1;Name=MBO1928714.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_02920;product=hypothetical protein;protein_id=MBO1928714.1;transl_table=11
JAGETS010000006.1	Genbank	pseudogene	205449	205913	.	+	.	ID=gene-J4731_02925;Name=J4731_02925;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_02925;pseudo=true
JAGETS010000006.1	Protein Homology	CDS	205449	205913	.	+	0	ID=cds-J4731_02925;Parent=gene-J4731_02925;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003113503.1;locus_tag=J4731_02925;product=sigma 54-interacting transcriptional regulator;pseudo=true;transl_table=11
JAGETS010000006.1	Genbank	gene	206121	206327	.	+	.	ID=gene-J4731_02930;Name=J4731_02930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_02930
JAGETS010000006.1	GeneMarkS-2+	CDS	206121	206327	.	+	0	ID=cds-MBO1928715.1;Parent=gene-J4731_02930;Dbxref=NCBI_GP:MBO1928715.1;Name=MBO1928715.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_02930;product=hypothetical protein;protein_id=MBO1928715.1;transl_table=11
JAGETS010000006.1	Genbank	pseudogene	206613	206850	.	-	.	ID=gene-J4731_02935;Name=J4731_02935;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_02935;pseudo=true
JAGETS010000006.1	Protein Homology	CDS	206613	206850	.	-	0	ID=cds-J4731_02935;Parent=gene-J4731_02935;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015870973.1;locus_tag=J4731_02935;product=hypothetical protein;pseudo=true;transl_table=11
JAGETS010000006.1	Genbank	gene	207263	207652	.	+	.	ID=gene-J4731_02940;Name=J4731_02940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_02940
JAGETS010000006.1	Protein Homology	CDS	207263	207652	.	+	0	ID=cds-MBO1928716.1;Parent=gene-J4731_02940;Dbxref=NCBI_GP:MBO1928716.1;Name=MBO1928716.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012589.1;locus_tag=J4731_02940;product=hypothetical protein;protein_id=MBO1928716.1;transl_table=11
JAGETS010000006.1	Genbank	gene	207680	207910	.	+	.	ID=gene-J4731_02945;Name=J4731_02945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_02945
JAGETS010000006.1	GeneMarkS-2+	CDS	207680	207910	.	+	0	ID=cds-MBO1928717.1;Parent=gene-J4731_02945;Dbxref=NCBI_GP:MBO1928717.1;Name=MBO1928717.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_02945;product=hypothetical protein;protein_id=MBO1928717.1;transl_table=11
JAGETS010000006.1	Genbank	gene	207903	208250	.	+	.	ID=gene-J4731_02950;Name=J4731_02950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_02950
JAGETS010000006.1	Protein Homology	CDS	207903	208250	.	+	0	ID=cds-MBO1928718.1;Parent=gene-J4731_02950;Dbxref=NCBI_GP:MBO1928718.1;Name=MBO1928718.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014801.1;locus_tag=J4731_02950;product=hypothetical protein;protein_id=MBO1928718.1;transl_table=11
JAGETS010000006.1	Genbank	pseudogene	208513	209756	.	+	.	ID=gene-J4731_02955;Name=J4731_02955;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_02955;pseudo=true
JAGETS010000006.1	Protein Homology	CDS	208513	209756	.	+	0	ID=cds-J4731_02955;Parent=gene-J4731_02955;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004259694.1;locus_tag=J4731_02955;product=L-rhamnose isomerase;pseudo=true;transl_table=11
JAGETS010000006.1	Genbank	pseudogene	209767	210580	.	+	.	ID=gene-J4731_02960;Name=rhaD;gbkey=Gene;gene=rhaD;gene_biotype=pseudogene;locus_tag=J4731_02960;pseudo=true
JAGETS010000006.1	Protein Homology	CDS	209767	210580	.	+	0	ID=cds-J4731_02960;Parent=gene-J4731_02960;Note=frameshifted;gbkey=CDS;gene=rhaD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008812717.1;locus_tag=J4731_02960;product=rhamnulose-1-phosphate aldolase;pseudo=true;transl_table=11
JAGETS010000006.1	Genbank	pseudogene	210647	211685	.	+	.	ID=gene-J4731_02965;Name=J4731_02965;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_02965;pseudo=true
JAGETS010000006.1	Protein Homology	CDS	210647	211685	.	+	0	ID=cds-J4731_02965;Parent=gene-J4731_02965;Note=transports L-rhamnose and L-lyxose into the cell%3B frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001472620.1;locus_tag=J4731_02965;product=rhamnose/proton symporter RhaT;pseudo=true;transl_table=11
JAGETS010000006.1	Genbank	pseudogene	211700	212835	.	+	.	ID=gene-J4731_02970;Name=fucO;gbkey=Gene;gene=fucO;gene_biotype=pseudogene;locus_tag=J4731_02970;pseudo=true
JAGETS010000006.1	Protein Homology	CDS	211700	212835	.	+	0	ID=cds-J4731_02970;Parent=gene-J4731_02970;Note=frameshifted;gbkey=CDS;gene=fucO;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010308248.1;locus_tag=J4731_02970;product=lactaldehyde reductase;pseudo=true;transl_table=11
JAGETS010000006.1	Genbank	pseudogene	212874	213157	.	+	.	ID=gene-J4731_02975;Name=rhaM;gbkey=Gene;gene=rhaM;gene_biotype=pseudogene;locus_tag=J4731_02975;pseudo=true
JAGETS010000006.1	Protein Homology	CDS	212874	213157	.	+	0	ID=cds-J4731_02975;Parent=gene-J4731_02975;Note=frameshifted;gbkey=CDS;gene=rhaM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011092059.1;locus_tag=J4731_02975;product=L-rhamnose mutarotase;pseudo=true;transl_table=11
JAGETS010000006.1	Genbank	gene	213198	213515	.	-	.	ID=gene-J4731_02980;Name=J4731_02980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_02980
JAGETS010000006.1	Protein Homology	CDS	213198	213515	.	-	0	ID=cds-MBO1928719.1;Parent=gene-J4731_02980;Dbxref=NCBI_GP:MBO1928719.1;Name=MBO1928719.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024242.1;locus_tag=J4731_02980;product=helix-turn-helix domain-containing protein;protein_id=MBO1928719.1;transl_table=11
JAGETS010000006.1	Genbank	gene	213722	213874	.	-	.	ID=gene-J4731_02985;Name=J4731_02985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_02985
JAGETS010000006.1	Protein Homology	CDS	213722	213874	.	-	0	ID=cds-MBO1928720.1;Parent=gene-J4731_02985;Dbxref=NCBI_GP:MBO1928720.1;Name=MBO1928720.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014376.1;locus_tag=J4731_02985;product=hypothetical protein;protein_id=MBO1928720.1;transl_table=11
JAGETS010000006.1	Genbank	gene	213802	214041	.	-	.	ID=gene-J4731_02990;Name=J4731_02990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_02990
JAGETS010000006.1	GeneMarkS-2+	CDS	213802	214041	.	-	0	ID=cds-MBO1928721.1;Parent=gene-J4731_02990;Dbxref=NCBI_GP:MBO1928721.1;Name=MBO1928721.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_02990;product=hypothetical protein;protein_id=MBO1928721.1;transl_table=11
JAGETS010000006.1	Genbank	gene	214082	214360	.	-	.	ID=gene-J4731_02995;Name=J4731_02995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_02995
JAGETS010000006.1	Protein Homology	CDS	214082	214360	.	-	0	ID=cds-MBO1928722.1;Parent=gene-J4731_02995;Dbxref=NCBI_GP:MBO1928722.1;Name=MBO1928722.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024242.1;locus_tag=J4731_02995;product=helix-turn-helix domain-containing protein;protein_id=MBO1928722.1;transl_table=11
##sequence-region JAGETS010000060.1 1 70089
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=587
JAGETS010000060.1	Genbank	region	1	70089	.	+	.	ID=JAGETS010000060.1:1..70089;Dbxref=taxon:587;collected-by=NHLS;collection-date=2018;country=South Africa: Pretoria;gbkey=Src;isolation-source=stool;lat-lon=25.7479 S 28.2293 E;mol_type=genomic DNA;nat-host=porcine;strain=SG003
JAGETS010000060.1	Genbank	pseudogene	1	1499	.	-	.	ID=gene-J4731_18800;Name=glnS;gbkey=Gene;gene=glnS;gene_biotype=pseudogene;locus_tag=J4731_18800;pseudo=true
JAGETS010000060.1	Protein Homology	CDS	1	1499	.	-	0	ID=cds-J4731_18800;Parent=gene-J4731_18800;Note=frameshifted%3B incomplete%3B missing C-terminus;gbkey=CDS;gene=glnS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225834.1;locus_tag=J4731_18800;product=glutamine--tRNA ligase;pseudo=true;transl_table=11
JAGETS010000060.1	Genbank	pseudogene	1668	2440	.	-	.	ID=gene-J4731_18805;Name=J4731_18805;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_18805;pseudo=true
JAGETS010000060.1	Protein Homology	CDS	1668	2440	.	-	0	ID=cds-J4731_18805;Parent=gene-J4731_18805;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004129438.1;locus_tag=J4731_18805;product=sulfite exporter TauE/SafE family protein;pseudo=true;transl_table=11
JAGETS010000060.1	Genbank	gene	2689	3057	.	-	.	ID=gene-J4731_18810;Name=J4731_18810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_18810
JAGETS010000060.1	GeneMarkS-2+	CDS	2689	3057	.	-	0	ID=cds-MBO1929582.1;Parent=gene-J4731_18810;Dbxref=NCBI_GP:MBO1929582.1;Name=MBO1929582.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_18810;product=hypothetical protein;protein_id=MBO1929582.1;transl_table=11
JAGETS010000060.1	Genbank	gene	3643	3891	.	-	.	ID=gene-J4731_18815;Name=J4731_18815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_18815
JAGETS010000060.1	Protein Homology	CDS	3643	3891	.	-	0	ID=cds-MBO1929583.1;Parent=gene-J4731_18815;Dbxref=NCBI_GP:MBO1929583.1;Name=MBO1929583.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004256948.1;locus_tag=J4731_18815;product=cloacin;protein_id=MBO1929583.1;transl_table=11
JAGETS010000060.1	Genbank	pseudogene	4135	6116	.	-	.	ID=gene-J4731_18820;Name=J4731_18820;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_18820;pseudo=true
JAGETS010000060.1	Protein Homology	CDS	4135	6116	.	-	0	ID=cds-J4731_18820;Parent=gene-J4731_18820;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006812796.1;locus_tag=J4731_18820;product=PTS transporter subunit EIIC;pseudo=true;transl_table=11
JAGETS010000060.1	Genbank	pseudogene	6575	7373	.	+	.	ID=gene-J4731_18825;Name=J4731_18825;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_18825;pseudo=true
JAGETS010000060.1	Protein Homology	CDS	6575	7373	.	+	0	ID=cds-J4731_18825;Parent=gene-J4731_18825;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006812797.1;locus_tag=J4731_18825;product=glucosamine-6-phosphate deaminase;pseudo=true;transl_table=11
JAGETS010000060.1	Genbank	pseudogene	7449	8601	.	+	.	ID=gene-J4731_18830;Name=nagA;gbkey=Gene;gene=nagA;gene_biotype=pseudogene;locus_tag=J4731_18830;pseudo=true
JAGETS010000060.1	Protein Homology	CDS	7449	8601	.	+	0	ID=cds-J4731_18830;Parent=gene-J4731_18830;Note=frameshifted;gbkey=CDS;gene=nagA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004096466.1;locus_tag=J4731_18830;product=N-acetylglucosamine-6-phosphate deacetylase;pseudo=true;transl_table=11
JAGETS010000060.1	Genbank	pseudogene	8609	9828	.	+	.	ID=gene-J4731_18835;Name=J4731_18835;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_18835;pseudo=true
JAGETS010000060.1	Protein Homology	CDS	8609	9828	.	+	0	ID=cds-J4731_18835;Parent=gene-J4731_18835;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006662320.1;locus_tag=J4731_18835;product=ROK family protein;pseudo=true;transl_table=11
JAGETS010000060.1	Genbank	gene	10195	10271	.	+	.	ID=gene-J4731_18840;Name=J4731_18840;gbkey=Gene;gene_biotype=tRNA;locus_tag=J4731_18840
JAGETS010000060.1	tRNAscan-SE	tRNA	10195	10271	.	+	.	ID=rna-J4731_18840;Parent=gene-J4731_18840;anticodon=(pos:10229..10231);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=J4731_18840;product=tRNA-Met
JAGETS010000060.1	tRNAscan-SE	exon	10195	10271	.	+	.	ID=exon-J4731_18840-1;Parent=rna-J4731_18840;anticodon=(pos:10229..10231);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=J4731_18840;product=tRNA-Met
JAGETS010000060.1	Genbank	gene	10279	10362	.	+	.	ID=gene-J4731_18845;Name=J4731_18845;gbkey=Gene;gene_biotype=tRNA;locus_tag=J4731_18845
JAGETS010000060.1	tRNAscan-SE	tRNA	10279	10362	.	+	.	ID=rna-J4731_18845;Parent=gene-J4731_18845;anticodon=(pos:10312..10314);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=J4731_18845;product=tRNA-Leu
JAGETS010000060.1	tRNAscan-SE	exon	10279	10362	.	+	.	ID=exon-J4731_18845-1;Parent=rna-J4731_18845;anticodon=(pos:10312..10314);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=J4731_18845;product=tRNA-Leu
JAGETS010000060.1	Genbank	gene	10394	10468	.	+	.	ID=gene-J4731_18850;Name=J4731_18850;gbkey=Gene;gene_biotype=tRNA;locus_tag=J4731_18850
JAGETS010000060.1	tRNAscan-SE	tRNA	10394	10468	.	+	.	ID=rna-J4731_18850;Parent=gene-J4731_18850;anticodon=(pos:10426..10428);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=J4731_18850;product=tRNA-Gln
JAGETS010000060.1	tRNAscan-SE	exon	10394	10468	.	+	.	ID=exon-J4731_18850-1;Parent=rna-J4731_18850;anticodon=(pos:10426..10428);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=J4731_18850;product=tRNA-Gln
JAGETS010000060.1	Genbank	gene	10500	10574	.	+	.	ID=gene-J4731_18855;Name=J4731_18855;gbkey=Gene;gene_biotype=tRNA;locus_tag=J4731_18855
JAGETS010000060.1	tRNAscan-SE	tRNA	10500	10574	.	+	.	ID=rna-J4731_18855;Parent=gene-J4731_18855;anticodon=(pos:10532..10534);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=J4731_18855;product=tRNA-Gln
JAGETS010000060.1	tRNAscan-SE	exon	10500	10574	.	+	.	ID=exon-J4731_18855-1;Parent=rna-J4731_18855;anticodon=(pos:10532..10534);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=J4731_18855;product=tRNA-Gln
JAGETS010000060.1	Genbank	gene	10625	10701	.	+	.	ID=gene-J4731_18860;Name=J4731_18860;gbkey=Gene;gene_biotype=tRNA;locus_tag=J4731_18860
JAGETS010000060.1	tRNAscan-SE	tRNA	10625	10701	.	+	.	ID=rna-J4731_18860;Parent=gene-J4731_18860;anticodon=(pos:10659..10661);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=J4731_18860;product=tRNA-Met
JAGETS010000060.1	tRNAscan-SE	exon	10625	10701	.	+	.	ID=exon-J4731_18860-1;Parent=rna-J4731_18860;anticodon=(pos:10659..10661);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=J4731_18860;product=tRNA-Met
JAGETS010000060.1	Genbank	gene	10711	10785	.	+	.	ID=gene-J4731_18865;Name=J4731_18865;gbkey=Gene;gene_biotype=tRNA;locus_tag=J4731_18865
JAGETS010000060.1	tRNAscan-SE	tRNA	10711	10785	.	+	.	ID=rna-J4731_18865;Parent=gene-J4731_18865;anticodon=(pos:10743..10745);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=J4731_18865;product=tRNA-Gln
JAGETS010000060.1	tRNAscan-SE	exon	10711	10785	.	+	.	ID=exon-J4731_18865-1;Parent=rna-J4731_18865;anticodon=(pos:10743..10745);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=J4731_18865;product=tRNA-Gln
JAGETS010000060.1	Genbank	pseudogene	11340	12603	.	+	.	ID=gene-J4731_18870;Name=J4731_18870;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_18870;pseudo=true
JAGETS010000060.1	Protein Homology	CDS	11340	12603	.	+	0	ID=cds-J4731_18870;Parent=gene-J4731_18870;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004957288.1;locus_tag=J4731_18870;product=dicarboxylate/amino acid:cation symporter;pseudo=true;transl_table=11
JAGETS010000060.1	Genbank	pseudogene	12744	13900	.	-	.	ID=gene-J4731_18875;Name=J4731_18875;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_18875;pseudo=true
JAGETS010000060.1	Protein Homology	CDS	12744	13900	.	-	0	ID=cds-J4731_18875;Parent=gene-J4731_18875;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014657726.1;locus_tag=J4731_18875;product=FAD-dependent monooxygenase;pseudo=true;transl_table=11
JAGETS010000060.1	Genbank	pseudogene	14360	15784	.	+	.	ID=gene-J4731_18880;Name=miaB;gbkey=Gene;gene=miaB;gene_biotype=pseudogene;locus_tag=J4731_18880;pseudo=true
JAGETS010000060.1	Protein Homology	CDS	14360	15784	.	+	0	ID=cds-J4731_18880;Parent=gene-J4731_18880;Note=frameshifted%3B internal stop;gbkey=CDS;gene=miaB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012770623.1;locus_tag=J4731_18880;product=tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB;pseudo=true;transl_table=11
JAGETS010000060.1	Genbank	pseudogene	15864	16845	.	+	.	ID=gene-J4731_18885;Name=J4731_18885;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_18885;pseudo=true
JAGETS010000060.1	Protein Homology	CDS	15864	16845	.	+	0	ID=cds-J4731_18885;Parent=gene-J4731_18885;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019844555.1;locus_tag=J4731_18885;product=PhoH family protein;pseudo=true;transl_table=11
JAGETS010000060.1	Genbank	pseudogene	16846	17312	.	+	.	ID=gene-J4731_18890;Name=ybeY;gbkey=Gene;gene=ybeY;gene_biotype=pseudogene;locus_tag=J4731_18890;pseudo=true
JAGETS010000060.1	Protein Homology	CDS	16846	17312	.	+	0	ID=cds-J4731_18890;Parent=gene-J4731_18890;Note=frameshifted;gbkey=CDS;gene=ybeY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005158419.1;locus_tag=J4731_18890;product=rRNA maturation RNase YbeY;pseudo=true;transl_table=11
JAGETS010000060.1	Genbank	pseudogene	17796	18677	.	+	.	ID=gene-J4731_18895;Name=corC;gbkey=Gene;gene=corC;gene_biotype=pseudogene;locus_tag=J4731_18895;pseudo=true
JAGETS010000060.1	Protein Homology	CDS	17796	18677	.	+	0	ID=cds-J4731_18895;Parent=gene-J4731_18895;Note=CorC(YbeX) belongs to the Cyclin M Mg2+ Exporter (CNNM) family%2C and was characterized as belonging to a set of three proteins%2C at least one of which must be present for CorA to function.%3B frameshifted;gbkey=CDS;gene=corC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014657724.1;locus_tag=J4731_18895;product=CNNM family magnesium/cobalt transport protein CorC;pseudo=true;transl_table=11
JAGETS010000060.1	Genbank	pseudogene	18677	20184	.	+	.	ID=gene-J4731_18900;Name=lnt;gbkey=Gene;gene=lnt;gene_biotype=pseudogene;locus_tag=J4731_18900;pseudo=true
JAGETS010000060.1	Protein Homology	CDS	18677	20184	.	+	0	ID=cds-J4731_18900;Parent=gene-J4731_18900;Note=frameshifted;gbkey=CDS;gene=lnt;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006660959.1;locus_tag=J4731_18900;product=apolipoprotein N-acyltransferase;pseudo=true;transl_table=11
JAGETS010000060.1	Genbank	pseudogene	20231	21138	.	-	.	ID=gene-J4731_18905;Name=J4731_18905;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_18905;pseudo=true
JAGETS010000060.1	Protein Homology	CDS	20231	21138	.	-	0	ID=cds-J4731_18905;Parent=gene-J4731_18905;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004917648.1;locus_tag=J4731_18905;product=sugar kinase;pseudo=true;transl_table=11
JAGETS010000060.1	Genbank	pseudogene	21142	22146	.	-	.	ID=gene-J4731_18910;Name=J4731_18910;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_18910;pseudo=true
JAGETS010000060.1	Protein Homology	CDS	21142	22146	.	-	0	ID=cds-J4731_18910;Parent=gene-J4731_18910;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012368341.1;locus_tag=J4731_18910;product=NrtR-regulated NrtX;pseudo=true;transl_table=11
JAGETS010000060.1	Genbank	pseudogene	22298	23001	.	+	.	ID=gene-J4731_18915;Name=J4731_18915;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_18915;pseudo=true
JAGETS010000060.1	Protein Homology	CDS	22298	23001	.	+	0	ID=cds-J4731_18915;Parent=gene-J4731_18915;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006536068.1;locus_tag=J4731_18915;product=NUDIX hydrolase;pseudo=true;transl_table=11
JAGETS010000060.1	Genbank	gene	23058	23375	.	-	.	ID=gene-J4731_18920;Name=J4731_18920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_18920
JAGETS010000060.1	GeneMarkS-2+	CDS	23058	23375	.	-	0	ID=cds-MBO1929584.1;Parent=gene-J4731_18920;Dbxref=NCBI_GP:MBO1929584.1;Name=MBO1929584.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_18920;product=hypothetical protein;protein_id=MBO1929584.1;transl_table=11
JAGETS010000060.1	Genbank	pseudogene	23737	24158	.	-	.	ID=gene-J4731_18925;Name=J4731_18925;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_18925;pseudo=true
JAGETS010000060.1	Protein Homology	CDS	23737	24158	.	-	0	ID=cds-J4731_18925;Parent=gene-J4731_18925;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006662327.1;locus_tag=J4731_18925;product=protein disulfide oxidoreductase;pseudo=true;transl_table=11
JAGETS010000060.1	Genbank	pseudogene	24574	25237	.	-	.	ID=gene-J4731_18930;Name=J4731_18930;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_18930;pseudo=true
JAGETS010000060.1	Protein Homology	CDS	24574	25237	.	-	0	ID=cds-J4731_18930;Parent=gene-J4731_18930;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008912122.1;locus_tag=J4731_18930;product=thioredoxin domain-containing protein;pseudo=true;transl_table=11
JAGETS010000060.1	Genbank	pseudogene	25271	27330	.	-	.	ID=gene-J4731_18935;Name=J4731_18935;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_18935;pseudo=true
JAGETS010000060.1	Protein Homology	CDS	25271	27330	.	-	0	ID=cds-J4731_18935;Parent=gene-J4731_18935;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004917643.1;locus_tag=J4731_18935;product=thioredoxin family protein;pseudo=true;transl_table=11
JAGETS010000060.1	Genbank	pseudogene	27379	27785	.	-	.	ID=gene-J4731_18940;Name=J4731_18940;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_18940;pseudo=true
JAGETS010000060.1	Protein Homology	CDS	27379	27785	.	-	0	ID=cds-J4731_18940;Parent=gene-J4731_18940;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004257027.1;locus_tag=J4731_18940;product=metal resistance protein;pseudo=true;transl_table=11
JAGETS010000060.1	Genbank	pseudogene	28362	29250	.	+	.	ID=gene-J4731_18945;Name=J4731_18945;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_18945;pseudo=true
JAGETS010000060.1	Protein Homology	CDS	28362	29250	.	+	0	ID=cds-J4731_18945;Parent=gene-J4731_18945;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225821.1;locus_tag=J4731_18945;product=amino acid ABC transporter substrate-binding protein;pseudo=true;transl_table=11
JAGETS010000060.1	Genbank	pseudogene	29361	30079	.	+	.	ID=gene-J4731_18950;Name=J4731_18950;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_18950;pseudo=true
JAGETS010000060.1	Protein Homology	CDS	29361	30079	.	+	0	ID=cds-J4731_18950;Parent=gene-J4731_18950;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706557.1;locus_tag=J4731_18950;product=amino acid ABC transporter permease;pseudo=true;transl_table=11
JAGETS010000060.1	Genbank	pseudogene	30084	30731	.	+	.	ID=gene-J4731_18955;Name=gltK;gbkey=Gene;gene=gltK;gene_biotype=pseudogene;locus_tag=J4731_18955;pseudo=true
JAGETS010000060.1	Protein Homology	CDS	30084	30731	.	+	0	ID=cds-J4731_18955;Parent=gene-J4731_18955;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;gene=gltK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706558.1;locus_tag=J4731_18955;product=glutamate/aspartate ABC transporter permease GltK;pseudo=true;transl_table=11
JAGETS010000060.1	Genbank	pseudogene	30708	31507	.	+	.	ID=gene-J4731_18960;Name=J4731_18960;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_18960;pseudo=true
JAGETS010000060.1	Protein Homology	CDS	30708	31507	.	+	0	ID=cds-J4731_18960;Parent=gene-J4731_18960;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020245804.1;locus_tag=J4731_18960;product=amino acid ABC transporter ATP-binding protein;pseudo=true;transl_table=11
JAGETS010000060.1	Genbank	pseudogene	31764	34315	.	+	.	ID=gene-J4731_18965;Name=leuS;gbkey=Gene;gene=leuS;gene_biotype=pseudogene;locus_tag=J4731_18965;pseudo=true
JAGETS010000060.1	Protein Homology	CDS	31764	34315	.	+	0	ID=cds-J4731_18965;Parent=gene-J4731_18965;Note=frameshifted%3B internal stop;gbkey=CDS;gene=leuS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008456064.1;locus_tag=J4731_18965;product=leucine--tRNA ligase;pseudo=true;transl_table=11
JAGETS010000060.1	Genbank	pseudogene	34346	34858	.	+	.	ID=gene-J4731_18970;Name=lptE;gbkey=Gene;gene=lptE;gene_biotype=pseudogene;locus_tag=J4731_18970;pseudo=true
JAGETS010000060.1	Protein Homology	CDS	34346	34858	.	+	0	ID=cds-J4731_18970;Parent=gene-J4731_18970;Note=frameshifted;gbkey=CDS;gene=lptE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004240841.1;locus_tag=J4731_18970;product=LPS assembly lipoprotein LptE;pseudo=true;transl_table=11
JAGETS010000060.1	Genbank	pseudogene	34877	35902	.	+	.	ID=gene-J4731_18975;Name=holA;gbkey=Gene;gene=holA;gene_biotype=pseudogene;locus_tag=J4731_18975;pseudo=true
JAGETS010000060.1	Protein Homology	CDS	34877	35902	.	+	0	ID=cds-J4731_18975;Parent=gene-J4731_18975;Note=frameshifted;gbkey=CDS;gene=holA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014657714.1;locus_tag=J4731_18975;product=DNA polymerase III subunit delta;pseudo=true;transl_table=11
JAGETS010000060.1	Genbank	pseudogene	35895	36556	.	+	.	ID=gene-J4731_18980;Name=nadD;gbkey=Gene;gene=nadD;gene_biotype=pseudogene;locus_tag=J4731_18980;pseudo=true
JAGETS010000060.1	Protein Homology	CDS	35895	36556	.	+	0	ID=cds-J4731_18980;Parent=gene-J4731_18980;Note=frameshifted;gbkey=CDS;gene=nadD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004257056.1;locus_tag=J4731_18980;product=nicotinate-nucleotide adenylyltransferase;pseudo=true;transl_table=11
JAGETS010000060.1	Genbank	pseudogene	36582	37182	.	-	.	ID=gene-J4731_18985;Name=J4731_18985;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_18985;pseudo=true
JAGETS010000060.1	Protein Homology	CDS	36582	37182	.	-	0	ID=cds-J4731_18985;Parent=gene-J4731_18985;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004917628.1;locus_tag=J4731_18985;product=YbgA family protein;pseudo=true;transl_table=11
JAGETS010000060.1	Genbank	pseudogene	37530	37837	.	+	.	ID=gene-J4731_18990;Name=rsfS;gbkey=Gene;gene=rsfS;gene_biotype=pseudogene;locus_tag=J4731_18990;pseudo=true
JAGETS010000060.1	Protein Homology	CDS	37530	37837	.	+	0	ID=cds-J4731_18990;Parent=gene-J4731_18990;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;gene=rsfS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014657711.1;locus_tag=J4731_18990;product=ribosome silencing factor;pseudo=true;transl_table=11
JAGETS010000060.1	Genbank	pseudogene	37842	38306	.	+	.	ID=gene-J4731_18995;Name=rlmH;gbkey=Gene;gene=rlmH;gene_biotype=pseudogene;locus_tag=J4731_18995;pseudo=true
JAGETS010000060.1	Protein Homology	CDS	37842	38306	.	+	0	ID=cds-J4731_18995;Parent=gene-J4731_18995;Note=frameshifted;gbkey=CDS;gene=rlmH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016245807.1;locus_tag=J4731_18995;product=23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH;pseudo=true;transl_table=11
JAGETS010000060.1	Genbank	pseudogene	38384	40109	.	+	.	ID=gene-J4731_19000;Name=mrdA;gbkey=Gene;gene=mrdA;gene_biotype=pseudogene;locus_tag=J4731_19000;pseudo=true
JAGETS010000060.1	Protein Homology	CDS	38384	40109	.	+	0	ID=cds-J4731_19000;Parent=gene-J4731_19000;Note=frameshifted%3B internal stop;gbkey=CDS;gene=mrdA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015462110.1;locus_tag=J4731_19000;product=peptidoglycan DD-transpeptidase MrdA;pseudo=true;transl_table=11
JAGETS010000060.1	Genbank	pseudogene	40290	41351	.	+	.	ID=gene-J4731_19005;Name=mrdB;gbkey=Gene;gene=mrdB;gene_biotype=pseudogene;gene_synonym=rodA;locus_tag=J4731_19005;pseudo=true
JAGETS010000060.1	Protein Homology	CDS	40290	41351	.	+	0	ID=cds-J4731_19005;Parent=gene-J4731_19005;Note=rod shape-determining protein RodA%3B frameshifted%3B internal stop;gbkey=CDS;gene=mrdB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014887978.1;locus_tag=J4731_19005;product=peptidoglycan glycosyltransferase MrdB;pseudo=true;transl_table=11
JAGETS010000060.1	Genbank	pseudogene	41351	42296	.	+	.	ID=gene-J4731_19010;Name=rlpA;gbkey=Gene;gene=rlpA;gene_biotype=pseudogene;locus_tag=J4731_19010;pseudo=true
JAGETS010000060.1	Protein Homology	CDS	41351	42296	.	+	0	ID=cds-J4731_19010;Parent=gene-J4731_19010;Note=frameshifted;gbkey=CDS;gene=rlpA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004240850.1;locus_tag=J4731_19010;product=endolytic peptidoglycan transglycosylase RlpA;pseudo=true;transl_table=11
JAGETS010000060.1	Genbank	pseudogene	42466	43670	.	+	.	ID=gene-J4731_19015;Name=dacA;gbkey=Gene;gene=dacA;gene_biotype=pseudogene;locus_tag=J4731_19015;pseudo=true
JAGETS010000060.1	Protein Homology	CDS	42466	43670	.	+	0	ID=cds-J4731_19015;Parent=gene-J4731_19015;Note=frameshifted;gbkey=CDS;gene=dacA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210323.1;locus_tag=J4731_19015;product=D-alanyl-D-alanine carboxypeptidase DacA;pseudo=true;transl_table=11
JAGETS010000060.1	Genbank	gene	43837	44097	.	+	.	ID=gene-J4731_19020;Name=J4731_19020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_19020
JAGETS010000060.1	Protein Homology	CDS	43837	44097	.	+	0	ID=cds-MBO1929585.1;Parent=gene-J4731_19020;Dbxref=NCBI_GP:MBO1929585.1;Name=MBO1929585.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013025009.1;locus_tag=J4731_19020;product=YbeD family protein;protein_id=MBO1929585.1;transl_table=11
JAGETS010000060.1	Genbank	pseudogene	44352	44904	.	+	.	ID=gene-J4731_19025;Name=lipB;gbkey=Gene;gene=lipB;gene_biotype=pseudogene;locus_tag=J4731_19025;pseudo=true
JAGETS010000060.1	Protein Homology	CDS	44352	44904	.	+	0	ID=cds-J4731_19025;Parent=gene-J4731_19025;Note=frameshifted;gbkey=CDS;gene=lipB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006660936.1;locus_tag=J4731_19025;product=lipoyl(octanoyl) transferase LipB;pseudo=true;transl_table=11
JAGETS010000060.1	Genbank	pseudogene	45025	45970	.	+	.	ID=gene-J4731_19030;Name=lipA;gbkey=Gene;gene=lipA;gene_biotype=pseudogene;locus_tag=J4731_19030;pseudo=true
JAGETS010000060.1	Protein Homology	CDS	45025	45970	.	+	0	ID=cds-J4731_19030;Parent=gene-J4731_19030;Note=frameshifted;gbkey=CDS;gene=lipA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012904980.1;locus_tag=J4731_19030;product=lipoyl synthase;pseudo=true;transl_table=11
JAGETS010000060.1	Genbank	gene	46111	46317	.	-	.	ID=gene-J4731_19035;Name=cspE;gbkey=Gene;gene=cspE;gene_biotype=protein_coding;gene_synonym=gicA,msmC;locus_tag=J4731_19035
JAGETS010000060.1	Protein Homology	CDS	46111	46317	.	-	0	ID=cds-MBO1929586.1;Parent=gene-J4731_19035;Dbxref=NCBI_GP:MBO1929586.1;Name=MBO1929586.1;gbkey=CDS;gene=cspE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225795.1;locus_tag=J4731_19035;product=transcription antiterminator/RNA stability regulator CspE;protein_id=MBO1929586.1;transl_table=11
JAGETS010000060.1	Genbank	pseudogene	46531	46983	.	-	.	ID=gene-J4731_19040;Name=J4731_19040;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_19040;pseudo=true
JAGETS010000060.1	Protein Homology	CDS	46531	46983	.	-	0	ID=cds-J4731_19040;Parent=gene-J4731_19040;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246069.1;locus_tag=J4731_19040;product=methylated-DNA--[protein]-cysteine S-methyltransferase;pseudo=true;transl_table=11
JAGETS010000060.1	Genbank	pseudogene	47270	47478	.	+	.	ID=gene-J4731_19045;Name=nrdH;gbkey=Gene;gene=nrdH;gene_biotype=pseudogene;locus_tag=J4731_19045;pseudo=true
JAGETS010000060.1	Protein Homology	CDS	47270	47478	.	+	0	ID=cds-J4731_19045;Parent=gene-J4731_19045;Note=frameshifted;gbkey=CDS;gene=nrdH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003415982.1;locus_tag=J4731_19045;product=glutaredoxin-like protein NrdH;pseudo=true;transl_table=11
JAGETS010000060.1	Genbank	pseudogene	47514	47911	.	+	.	ID=gene-J4731_19050;Name=nrdI;gbkey=Gene;gene=nrdI;gene_biotype=pseudogene;locus_tag=J4731_19050;pseudo=true
JAGETS010000060.1	Protein Homology	CDS	47514	47911	.	+	0	ID=cds-J4731_19050;Parent=gene-J4731_19050;Note=frameshifted;gbkey=CDS;gene=nrdI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012146428.1;locus_tag=J4731_19050;product=class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI;pseudo=true;transl_table=11
JAGETS010000060.1	Genbank	pseudogene	47923	50062	.	+	.	ID=gene-J4731_19055;Name=nrdE;gbkey=Gene;gene=nrdE;gene_biotype=pseudogene;locus_tag=J4731_19055;pseudo=true
JAGETS010000060.1	Protein Homology	CDS	47923	50062	.	+	0	ID=cds-J4731_19055;Parent=gene-J4731_19055;Note=frameshifted;gbkey=CDS;gene=nrdE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004257107.1;locus_tag=J4731_19055;product=class 1b ribonucleoside-diphosphate reductase subunit alpha;pseudo=true;transl_table=11
JAGETS010000060.1	Genbank	pseudogene	50043	51001	.	+	.	ID=gene-J4731_19060;Name=nrdF;gbkey=Gene;gene=nrdF;gene_biotype=pseudogene;locus_tag=J4731_19060;pseudo=true
JAGETS010000060.1	Protein Homology	CDS	50043	51001	.	+	0	ID=cds-J4731_19060;Parent=gene-J4731_19060;Note=frameshifted%3B internal stop;gbkey=CDS;gene=nrdF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006327453.1;locus_tag=J4731_19060;product=class 1b ribonucleoside-diphosphate reductase subunit beta;pseudo=true;transl_table=11
JAGETS010000060.1	Genbank	pseudogene	51724	52911	.	+	.	ID=gene-J4731_19065;Name=proV;gbkey=Gene;gene=proV;gene_biotype=pseudogene;locus_tag=J4731_19065;pseudo=true
JAGETS010000060.1	Protein Homology	CDS	51724	52911	.	+	0	ID=cds-J4731_19065;Parent=gene-J4731_19065;Note=frameshifted;gbkey=CDS;gene=proV;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212210.1;locus_tag=J4731_19065;product=glycine betaine/L-proline ABC transporter ATP-binding protein ProV;pseudo=true;transl_table=11
JAGETS010000060.1	Genbank	pseudogene	52904	54072	.	+	.	ID=gene-J4731_19070;Name=proW;gbkey=Gene;gene=proW;gene_biotype=pseudogene;locus_tag=J4731_19070;pseudo=true
JAGETS010000060.1	Protein Homology	CDS	52904	54072	.	+	0	ID=cds-J4731_19070;Parent=gene-J4731_19070;Note=frameshifted;gbkey=CDS;gene=proW;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004257114.1;locus_tag=J4731_19070;product=glycine betaine/L-proline ABC transporter permease ProW;pseudo=true;transl_table=11
JAGETS010000060.1	Genbank	pseudogene	54172	55155	.	+	.	ID=gene-J4731_19075;Name=proX;gbkey=Gene;gene=proX;gene_biotype=pseudogene;locus_tag=J4731_19075;pseudo=true
JAGETS010000060.1	Protein Homology	CDS	54172	55155	.	+	0	ID=cds-J4731_19075;Parent=gene-J4731_19075;Note=frameshifted;gbkey=CDS;gene=proX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014657704.1;locus_tag=J4731_19075;product=glycine betaine/L-proline ABC transporter substrate-binding protein ProX;pseudo=true;transl_table=11
JAGETS010000060.1	Genbank	pseudogene	55287	56470	.	+	.	ID=gene-J4731_19080;Name=J4731_19080;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_19080;pseudo=true
JAGETS010000060.1	Protein Homology	CDS	55287	56470	.	+	0	ID=cds-J4731_19080;Parent=gene-J4731_19080;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004257121.1;locus_tag=J4731_19080;product=MFS transporter;pseudo=true;transl_table=11
JAGETS010000060.1	Genbank	pseudogene	57127	57640	.	+	.	ID=gene-J4731_19085;Name=mprA;gbkey=Gene;gene=mprA;gene_biotype=pseudogene;locus_tag=J4731_19085;pseudo=true
JAGETS010000060.1	Protein Homology	CDS	57127	57640	.	+	0	ID=cds-J4731_19085;Parent=gene-J4731_19085;Note=frameshifted;gbkey=CDS;gene=mprA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246081.1;locus_tag=J4731_19085;product=transcriptional repressor MprA;pseudo=true;transl_table=11
JAGETS010000060.1	Genbank	pseudogene	57853	59029	.	+	.	ID=gene-J4731_19090;Name=emrA;gbkey=Gene;gene=emrA;gene_biotype=pseudogene;locus_tag=J4731_19090;pseudo=true
JAGETS010000060.1	Protein Homology	CDS	57853	59029	.	+	0	ID=cds-J4731_19090;Parent=gene-J4731_19090;Note=frameshifted;gbkey=CDS;gene=emrA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015684007.1;locus_tag=J4731_19090;product=multidrug efflux MFS transporter periplasmic adaptor subunit EmrA;pseudo=true;transl_table=11
JAGETS010000060.1	Genbank	pseudogene	59081	60566	.	+	.	ID=gene-J4731_19095;Name=emrB;gbkey=Gene;gene=emrB;gene_biotype=pseudogene;locus_tag=J4731_19095;pseudo=true
JAGETS010000060.1	Protein Homology	CDS	59081	60566	.	+	0	ID=cds-J4731_19095;Parent=gene-J4731_19095;Note=frameshifted%3B internal stop;gbkey=CDS;gene=emrB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008101642.1;locus_tag=J4731_19095;product=multidrug efflux MFS transporter permease subunit EmrB;pseudo=true;transl_table=11
JAGETS010000060.1	Genbank	pseudogene	60667	61757	.	-	.	ID=gene-J4731_19100;Name=J4731_19100;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_19100;pseudo=true
JAGETS010000060.1	Protein Homology	CDS	60667	61757	.	-	0	ID=cds-J4731_19100;Parent=gene-J4731_19100;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004257138.1;locus_tag=J4731_19100;product=tRNA/rRNA methyltransferase;pseudo=true;transl_table=11
JAGETS010000060.1	Genbank	pseudogene	62030	62688	.	+	.	ID=gene-J4731_19105;Name=J4731_19105;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_19105;pseudo=true
JAGETS010000060.1	Protein Homology	CDS	62030	62688	.	+	0	ID=cds-J4731_19105;Parent=gene-J4731_19105;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008912167.1;locus_tag=J4731_19105;product=DTW domain-containing protein;pseudo=true;transl_table=11
JAGETS010000060.1	Genbank	pseudogene	62853	65481	.	+	.	ID=gene-J4731_19110;Name=J4731_19110;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_19110;pseudo=true
JAGETS010000060.1	Protein Homology	CDS	62853	65481	.	+	0	ID=cds-J4731_19110;Parent=gene-J4731_19110;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004257143.1;locus_tag=J4731_19110;product=bifunctional acetate--CoA ligase family protein/GNAT family N-acetyltransferase;pseudo=true;transl_table=11
JAGETS010000060.1	Genbank	pseudogene	65641	66993	.	+	.	ID=gene-J4731_19115;Name=pssA;gbkey=Gene;gene=pssA;gene_biotype=pseudogene;locus_tag=J4731_19115;pseudo=true
JAGETS010000060.1	Protein Homology	CDS	65641	66993	.	+	0	ID=cds-J4731_19115;Parent=gene-J4731_19115;Note=frameshifted;gbkey=CDS;gene=pssA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208751.1;locus_tag=J4731_19115;product=CDP-diacylglycerol--serine O-phosphatidyltransferase;pseudo=true;transl_table=11
JAGETS010000060.1	Genbank	pseudogene	67064	67395	.	+	.	ID=gene-J4731_19120;Name=J4731_19120;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_19120;pseudo=true
JAGETS010000060.1	Protein Homology	CDS	67064	67395	.	+	0	ID=cds-J4731_19120;Parent=gene-J4731_19120;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004257147.1;locus_tag=J4731_19120;product=YfiM family lipoprotein;pseudo=true;transl_table=11
JAGETS010000060.1	Genbank	gene	67826	68212	.	+	.	ID=gene-J4731_19125;Name=J4731_19125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_19125
JAGETS010000060.1	Protein Homology	CDS	67826	68212	.	+	0	ID=cds-MBO1929587.1;Parent=gene-J4731_19125;Dbxref=NCBI_GP:MBO1929587.1;Name=MBO1929587.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013204462.1;locus_tag=J4731_19125;product=amino acid-binding protein;protein_id=MBO1929587.1;transl_table=11
JAGETS010000060.1	Genbank	pseudogene	68253	68905	.	+	.	ID=gene-J4731_19130;Name=J4731_19130;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_19130;pseudo=true
JAGETS010000060.1	Protein Homology	CDS	68253	68905	.	+	0	ID=cds-J4731_19130;Parent=gene-J4731_19130;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015387239.1;locus_tag=J4731_19130;product=winged helix-turn-helix transcriptional regulator;pseudo=true;transl_table=11
JAGETS010000060.1	Genbank	gene	69099	69174	.	-	.	ID=gene-J4731_19135;Name=J4731_19135;gbkey=Gene;gene_biotype=tRNA;locus_tag=J4731_19135
JAGETS010000060.1	tRNAscan-SE	tRNA	69099	69174	.	-	.	ID=rna-J4731_19135;Parent=gene-J4731_19135;anticodon=(pos:complement(69138..69140));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=J4731_19135;product=tRNA-Asp
JAGETS010000060.1	tRNAscan-SE	exon	69099	69174	.	-	.	ID=exon-J4731_19135-1;Parent=rna-J4731_19135;anticodon=(pos:complement(69138..69140));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=J4731_19135;product=tRNA-Asp
JAGETS010000060.1	Genbank	gene	69233	69344	.	-	.	ID=gene-J4731_19140;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=J4731_19140
JAGETS010000060.1	cmsearch	rRNA	69233	69344	.	-	.	ID=rna-J4731_19140;Parent=gene-J4731_19140;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=J4731_19140;product=5S ribosomal RNA
JAGETS010000060.1	cmsearch	exon	69233	69344	.	-	.	ID=exon-J4731_19140-1;Parent=rna-J4731_19140;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=J4731_19140;product=5S ribosomal RNA
JAGETS010000060.1	Genbank	gene	69484	70089	.	-	.	ID=gene-J4731_19145;Name=J4731_19145;end_range=70089,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=J4731_19145;partial=true
JAGETS010000060.1	cmsearch	rRNA	69484	70089	.	-	.	ID=rna-J4731_19145;Parent=gene-J4731_19145;Dbxref=RFAM:RF02541;end_range=70089,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=J4731_19145;partial=true;product=23S ribosomal RNA
JAGETS010000060.1	cmsearch	exon	69484	70089	.	-	.	ID=exon-J4731_19145-1;Parent=rna-J4731_19145;Dbxref=RFAM:RF02541;end_range=70089,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=J4731_19145;partial=true;product=23S ribosomal RNA
##sequence-region JAGETS010000061.1 1 55785
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=587
JAGETS010000061.1	Genbank	region	1	55785	.	+	.	ID=JAGETS010000061.1:1..55785;Dbxref=taxon:587;collected-by=NHLS;collection-date=2018;country=South Africa: Pretoria;gbkey=Src;isolation-source=stool;lat-lon=25.7479 S 28.2293 E;mol_type=genomic DNA;nat-host=porcine;strain=SG003
JAGETS010000061.1	Genbank	gene	200	472	.	-	.	ID=gene-J4731_19150;Name=J4731_19150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_19150
JAGETS010000061.1	GeneMarkS-2+	CDS	200	472	.	-	0	ID=cds-MBO1929588.1;Parent=gene-J4731_19150;Dbxref=NCBI_GP:MBO1929588.1;Name=MBO1929588.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_19150;product=hypothetical protein;protein_id=MBO1929588.1;transl_table=11
JAGETS010000061.1	Genbank	pseudogene	534	1181	.	-	.	ID=gene-J4731_19155;Name=J4731_19155;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_19155;pseudo=true
JAGETS010000061.1	Protein Homology	CDS	534	1181	.	-	0	ID=cds-J4731_19155;Parent=gene-J4731_19155;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004243597.1;locus_tag=J4731_19155;product=response regulator;pseudo=true;transl_table=11
JAGETS010000061.1	Genbank	pseudogene	1790	2050	.	-	.	ID=gene-J4731_19160;Name=J4731_19160;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_19160;pseudo=true
JAGETS010000061.1	Protein Homology	CDS	1790	2050	.	-	0	ID=cds-J4731_19160;Parent=gene-J4731_19160;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004260032.1;locus_tag=J4731_19160;product=DinI-like family protein;pseudo=true;transl_table=11
JAGETS010000061.1	Genbank	pseudogene	2271	2787	.	+	.	ID=gene-J4731_19165;Name=J4731_19165;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_19165;pseudo=true
JAGETS010000061.1	Protein Homology	CDS	2271	2787	.	+	0	ID=cds-J4731_19165;Parent=gene-J4731_19165;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004260035.1;locus_tag=J4731_19165;product=GNAT family N-acetyltransferase;pseudo=true;transl_table=11
JAGETS010000061.1	Genbank	pseudogene	3508	4087	.	+	.	ID=gene-J4731_19170;Name=J4731_19170;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_19170;pseudo=true
JAGETS010000061.1	Protein Homology	CDS	3508	4087	.	+	0	ID=cds-J4731_19170;Parent=gene-J4731_19170;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004238009.1;locus_tag=J4731_19170;product=class I SAM-dependent methyltransferase;pseudo=true;transl_table=11
JAGETS010000061.1	Genbank	gene	4870	5475	.	-	.	ID=gene-J4731_19175;Name=J4731_19175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_19175
JAGETS010000061.1	GeneMarkS-2+	CDS	4870	5475	.	-	0	ID=cds-MBO1929589.1;Parent=gene-J4731_19175;Dbxref=NCBI_GP:MBO1929589.1;Name=MBO1929589.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_19175;product=hypothetical protein;protein_id=MBO1929589.1;transl_table=11
JAGETS010000061.1	Genbank	gene	5860	6027	.	+	.	ID=gene-J4731_19180;Name=J4731_19180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_19180
JAGETS010000061.1	GeneMarkS-2+	CDS	5860	6027	.	+	0	ID=cds-MBO1929590.1;Parent=gene-J4731_19180;Dbxref=NCBI_GP:MBO1929590.1;Name=MBO1929590.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_19180;product=hypothetical protein;protein_id=MBO1929590.1;transl_table=11
JAGETS010000061.1	Genbank	pseudogene	6261	6768	.	-	.	ID=gene-J4731_19185;Name=J4731_19185;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_19185;pseudo=true
JAGETS010000061.1	Protein Homology	CDS	6261	6768	.	-	0	ID=cds-J4731_19185;Parent=gene-J4731_19185;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015370153.1;locus_tag=J4731_19185;product=3'-5' exoribonuclease;pseudo=true;transl_table=11
JAGETS010000061.1	Genbank	gene	7160	7324	.	-	.	ID=gene-J4731_19190;Name=J4731_19190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_19190
JAGETS010000061.1	GeneMarkS-2+	CDS	7160	7324	.	-	0	ID=cds-MBO1929591.1;Parent=gene-J4731_19190;Dbxref=NCBI_GP:MBO1929591.1;Name=MBO1929591.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_19190;product=hypothetical protein;protein_id=MBO1929591.1;transl_table=11
JAGETS010000061.1	Genbank	pseudogene	8093	8566	.	-	.	ID=gene-J4731_19195;Name=J4731_19195;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_19195;pseudo=true
JAGETS010000061.1	Protein Homology	CDS	8093	8566	.	-	0	ID=cds-J4731_19195;Parent=gene-J4731_19195;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006662240.1;locus_tag=J4731_19195;product=hypothetical protein;pseudo=true;transl_table=11
JAGETS010000061.1	Genbank	pseudogene	8581	9344	.	-	.	ID=gene-J4731_19200;Name=J4731_19200;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_19200;pseudo=true
JAGETS010000061.1	Protein Homology	CDS	8581	9344	.	-	0	ID=cds-J4731_19200;Parent=gene-J4731_19200;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004253642.1;locus_tag=J4731_19200;product=hypothetical protein;pseudo=true;transl_table=11
JAGETS010000061.1	Genbank	gene	10104	10325	.	-	.	ID=gene-J4731_19205;Name=J4731_19205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_19205
JAGETS010000061.1	GeneMarkS-2+	CDS	10104	10325	.	-	0	ID=cds-MBO1929592.1;Parent=gene-J4731_19205;Dbxref=NCBI_GP:MBO1929592.1;Name=MBO1929592.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_19205;product=hypothetical protein;protein_id=MBO1929592.1;transl_table=11
JAGETS010000061.1	Genbank	gene	10473	10664	.	-	.	ID=gene-J4731_19210;Name=csrA;gbkey=Gene;gene=csrA;gene_biotype=protein_coding;locus_tag=J4731_19210
JAGETS010000061.1	Protein Homology	CDS	10473	10664	.	-	0	ID=cds-MBO1929593.1;Parent=gene-J4731_19210;Dbxref=NCBI_GP:MBO1929593.1;Name=MBO1929593.1;gbkey=CDS;gene=csrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_249596.1;locus_tag=J4731_19210;product=carbon storage regulator CsrA;protein_id=MBO1929593.1;transl_table=11
JAGETS010000061.1	Genbank	pseudogene	10699	10915	.	-	.	ID=gene-J4731_19215;Name=J4731_19215;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_19215;pseudo=true
JAGETS010000061.1	Protein Homology	CDS	10699	10915	.	-	0	ID=cds-J4731_19215;Parent=gene-J4731_19215;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006657723.1;locus_tag=J4731_19215;product=hypothetical protein;pseudo=true;transl_table=11
JAGETS010000061.1	Genbank	pseudogene	11051	11696	.	-	.	ID=gene-J4731_19220;Name=J4731_19220;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_19220;pseudo=true
JAGETS010000061.1	Protein Homology	CDS	11051	11696	.	-	0	ID=cds-J4731_19220;Parent=gene-J4731_19220;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014640055.1;locus_tag=J4731_19220;product=helix-turn-helix domain-containing protein;pseudo=true;transl_table=11
JAGETS010000061.1	Genbank	pseudogene	11792	11984	.	+	.	ID=gene-J4731_19225;Name=J4731_19225;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_19225;pseudo=true
JAGETS010000061.1	Protein Homology	CDS	11792	11984	.	+	0	ID=cds-J4731_19225;Parent=gene-J4731_19225;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006661519.1;locus_tag=J4731_19225;product=hypothetical protein;pseudo=true;transl_table=11
JAGETS010000061.1	Genbank	pseudogene	12022	12470	.	+	.	ID=gene-J4731_19230;Name=J4731_19230;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_19230;pseudo=true
JAGETS010000061.1	Protein Homology	CDS	12022	12470	.	+	0	ID=cds-J4731_19230;Parent=gene-J4731_19230;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006661520.1;locus_tag=J4731_19230;product=hypothetical protein;pseudo=true;transl_table=11
JAGETS010000061.1	Genbank	gene	12811	12933	.	+	.	ID=gene-J4731_19235;Name=J4731_19235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_19235
JAGETS010000061.1	Protein Homology	CDS	12811	12933	.	+	0	ID=cds-MBO1929594.1;Parent=gene-J4731_19235;Dbxref=NCBI_GP:MBO1929594.1;Name=MBO1929594.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004238677.1;locus_tag=J4731_19235;product=DUF4222 domain-containing protein;protein_id=MBO1929594.1;transl_table=11
JAGETS010000061.1	Genbank	pseudogene	12943	14001	.	+	.	ID=gene-J4731_19240;Name=J4731_19240;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_19240;pseudo=true
JAGETS010000061.1	Protein Homology	CDS	12943	14001	.	+	0	ID=cds-J4731_19240;Parent=gene-J4731_19240;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006662232.1;locus_tag=J4731_19240;product=conserved phage C-terminal domain-containing protein;pseudo=true;transl_table=11
JAGETS010000061.1	Genbank	pseudogene	14001	14248	.	+	.	ID=gene-J4731_19245;Name=J4731_19245;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_19245;pseudo=true
JAGETS010000061.1	Protein Homology	CDS	14001	14248	.	+	0	ID=cds-J4731_19245;Parent=gene-J4731_19245;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006661524.1;locus_tag=J4731_19245;product=hypothetical protein;pseudo=true;transl_table=11
JAGETS010000061.1	Genbank	pseudogene	14329	15124	.	+	.	ID=gene-J4731_19250;Name=J4731_19250;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_19250;pseudo=true
JAGETS010000061.1	Protein Homology	CDS	14329	15124	.	+	0	ID=cds-J4731_19250;Parent=gene-J4731_19250;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006812609.1;locus_tag=J4731_19250;product=phage N-6-adenine-methyltransferase;pseudo=true;transl_table=11
JAGETS010000061.1	Genbank	pseudogene	15321	16063	.	+	.	ID=gene-J4731_19255;Name=J4731_19255;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_19255;pseudo=true
JAGETS010000061.1	Protein Homology	CDS	15321	16063	.	+	0	ID=cds-J4731_19255;Parent=gene-J4731_19255;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015964734.1;locus_tag=J4731_19255;product=hypothetical protein;pseudo=true;transl_table=11
JAGETS010000061.1	Genbank	pseudogene	16083	16266	.	+	.	ID=gene-J4731_19260;Name=J4731_19260;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_19260;pseudo=true
JAGETS010000061.1	Protein Homology	CDS	16083	16266	.	+	0	ID=cds-J4731_19260;Parent=gene-J4731_19260;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006661527.1;locus_tag=J4731_19260;product=Lar family restriction alleviation protein;pseudo=true;transl_table=11
JAGETS010000061.1	Genbank	pseudogene	16306	17069	.	+	.	ID=gene-J4731_19265;Name=J4731_19265;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_19265;pseudo=true
JAGETS010000061.1	Protein Homology	CDS	16306	17069	.	+	0	ID=cds-J4731_19265;Parent=gene-J4731_19265;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008323291.1;locus_tag=J4731_19265;product=KilA-N domain-containing protein;pseudo=true;transl_table=11
JAGETS010000061.1	Genbank	pseudogene	17336	17658	.	+	.	ID=gene-J4731_19270;Name=J4731_19270;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_19270;pseudo=true
JAGETS010000061.1	Protein Homology	CDS	17336	17658	.	+	0	ID=cds-J4731_19270;Parent=gene-J4731_19270;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020315049.1;locus_tag=J4731_19270;product=DUF968 domain-containing protein;pseudo=true;transl_table=11
JAGETS010000061.1	Genbank	pseudogene	17636	18426	.	+	.	ID=gene-J4731_19275;Name=J4731_19275;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_19275;pseudo=true
JAGETS010000061.1	Protein Homology	CDS	17636	18426	.	+	0	ID=cds-J4731_19275;Parent=gene-J4731_19275;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004918406.1;locus_tag=J4731_19275;product=antitermination protein;pseudo=true;transl_table=11
JAGETS010000061.1	Genbank	pseudogene	18638	18924	.	-	.	ID=gene-J4731_19280;Name=J4731_19280;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_19280;pseudo=true
JAGETS010000061.1	Protein Homology	CDS	18638	18924	.	-	0	ID=cds-J4731_19280;Parent=gene-J4731_19280;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004255246.1;locus_tag=J4731_19280;product=acid-resistance protein;pseudo=true;transl_table=11
JAGETS010000061.1	Genbank	pseudogene	19641	20193	.	+	.	ID=gene-J4731_19285;Name=J4731_19285;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_19285;pseudo=true
JAGETS010000061.1	Protein Homology	CDS	19641	20193	.	+	0	ID=cds-J4731_19285;Parent=gene-J4731_19285;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005174510.1;locus_tag=J4731_19285;product=S-adenosylmethionine-binding protein;pseudo=true;transl_table=11
JAGETS010000061.1	Genbank	gene	20595	21059	.	+	.	ID=gene-J4731_19290;Name=J4731_19290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_19290
JAGETS010000061.1	Protein Homology	CDS	20595	21059	.	+	0	ID=cds-MBO1929595.1;Parent=gene-J4731_19290;Dbxref=NCBI_GP:MBO1929595.1;Name=MBO1929595.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF028241.1;locus_tag=J4731_19290;product=hypothetical protein;protein_id=MBO1929595.1;transl_table=11
JAGETS010000061.1	Genbank	gene	21040	21420	.	+	.	ID=gene-J4731_19295;Name=J4731_19295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_19295
JAGETS010000061.1	GeneMarkS-2+	CDS	21040	21420	.	+	0	ID=cds-MBO1929596.1;Parent=gene-J4731_19295;Dbxref=NCBI_GP:MBO1929596.1;Name=MBO1929596.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_19295;product=hypothetical protein;protein_id=MBO1929596.1;transl_table=11
JAGETS010000061.1	Genbank	pseudogene	21417	21772	.	+	.	ID=gene-J4731_19300;Name=J4731_19300;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_19300;pseudo=true
JAGETS010000061.1	Protein Homology	CDS	21417	21772	.	+	0	ID=cds-J4731_19300;Parent=gene-J4731_19300;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006659513.1;locus_tag=J4731_19300;product=DUF882 domain-containing protein;pseudo=true;transl_table=11
JAGETS010000061.1	Genbank	gene	21985	22146	.	+	.	ID=gene-J4731_19305;Name=J4731_19305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_19305
JAGETS010000061.1	GeneMarkS-2+	CDS	21985	22146	.	+	0	ID=cds-MBO1929597.1;Parent=gene-J4731_19305;Dbxref=NCBI_GP:MBO1929597.1;Name=MBO1929597.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_19305;product=hypothetical protein;protein_id=MBO1929597.1;transl_table=11
JAGETS010000061.1	Genbank	gene	22315	22578	.	+	.	ID=gene-J4731_19310;Name=J4731_19310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_19310
JAGETS010000061.1	GeneMarkS-2+	CDS	22315	22578	.	+	0	ID=cds-MBO1929598.1;Parent=gene-J4731_19310;Dbxref=NCBI_GP:MBO1929598.1;Name=MBO1929598.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_19310;product=hypothetical protein;protein_id=MBO1929598.1;transl_table=11
JAGETS010000061.1	Genbank	gene	22776	22922	.	+	.	ID=gene-J4731_19315;Name=J4731_19315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_19315
JAGETS010000061.1	GeneMarkS-2+	CDS	22776	22922	.	+	0	ID=cds-MBO1929599.1;Parent=gene-J4731_19315;Dbxref=NCBI_GP:MBO1929599.1;Name=MBO1929599.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_19315;product=hypothetical protein;protein_id=MBO1929599.1;transl_table=11
JAGETS010000061.1	Genbank	gene	23279	23458	.	+	.	ID=gene-J4731_19320;Name=J4731_19320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_19320
JAGETS010000061.1	Protein Homology	CDS	23279	23458	.	+	0	ID=cds-MBO1929600.1;Parent=gene-J4731_19320;Dbxref=NCBI_GP:MBO1929600.1;Name=MBO1929600.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020317317.1;locus_tag=J4731_19320;product=hypothetical protein;protein_id=MBO1929600.1;transl_table=11
JAGETS010000061.1	Genbank	pseudogene	23813	24469	.	+	.	ID=gene-J4731_19325;Name=J4731_19325;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_19325;pseudo=true
JAGETS010000061.1	Protein Homology	CDS	23813	24469	.	+	0	ID=cds-J4731_19325;Parent=gene-J4731_19325;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001472183.1;locus_tag=J4731_19325;product=hypothetical protein;pseudo=true;transl_table=11
JAGETS010000061.1	Genbank	gene	24466	24849	.	+	.	ID=gene-J4731_19330;Name=J4731_19330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_19330
JAGETS010000061.1	GeneMarkS-2+	CDS	24466	24849	.	+	0	ID=cds-MBO1929601.1;Parent=gene-J4731_19330;Dbxref=NCBI_GP:MBO1929601.1;Name=MBO1929601.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_19330;product=hypothetical protein;protein_id=MBO1929601.1;transl_table=11
JAGETS010000061.1	Genbank	gene	25006	25209	.	+	.	ID=gene-J4731_19335;Name=J4731_19335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_19335
JAGETS010000061.1	GeneMarkS-2+	CDS	25006	25209	.	+	0	ID=cds-MBO1929602.1;Parent=gene-J4731_19335;Dbxref=NCBI_GP:MBO1929602.1;Name=MBO1929602.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_19335;product=hypothetical protein;protein_id=MBO1929602.1;transl_table=11
JAGETS010000061.1	Genbank	gene	25351	25956	.	+	.	ID=gene-J4731_19340;Name=J4731_19340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_19340
JAGETS010000061.1	Protein Homology	CDS	25351	25956	.	+	0	ID=cds-MBO1929603.1;Parent=gene-J4731_19340;Dbxref=NCBI_GP:MBO1929603.1;Name=MBO1929603.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017673.1;locus_tag=J4731_19340;product=phage terminase large subunit family protein;protein_id=MBO1929603.1;transl_table=11
JAGETS010000061.1	Genbank	gene	25963	26343	.	+	.	ID=gene-J4731_19345;Name=J4731_19345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_19345
JAGETS010000061.1	Protein Homology	CDS	25963	26343	.	+	0	ID=cds-MBO1929604.1;Parent=gene-J4731_19345;Dbxref=NCBI_GP:MBO1929604.1;Name=MBO1929604.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017673.1;locus_tag=J4731_19345;product=phage terminase large subunit family protein;protein_id=MBO1929604.1;transl_table=11
JAGETS010000061.1	Genbank	gene	26316	26552	.	+	.	ID=gene-J4731_19350;Name=J4731_19350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_19350
JAGETS010000061.1	Protein Homology	CDS	26316	26552	.	+	0	ID=cds-MBO1929605.1;Parent=gene-J4731_19350;Dbxref=NCBI_GP:MBO1929605.1;Name=MBO1929605.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017673.1;locus_tag=J4731_19350;product=phage terminase large subunit family protein;protein_id=MBO1929605.1;transl_table=11
JAGETS010000061.1	Genbank	pseudogene	26622	27410	.	+	.	ID=gene-J4731_19355;Name=J4731_19355;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_19355;pseudo=true
JAGETS010000061.1	Protein Homology	CDS	26622	27410	.	+	0	ID=cds-J4731_19355;Parent=gene-J4731_19355;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001472187.1;locus_tag=J4731_19355;product=phage terminase large subunit family protein;pseudo=true;transl_table=11
JAGETS010000061.1	Genbank	pseudogene	27816	29375	.	+	.	ID=gene-J4731_19360;Name=J4731_19360;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_19360;pseudo=true
JAGETS010000061.1	Protein Homology	CDS	27816	29375	.	+	0	ID=cds-J4731_19360;Parent=gene-J4731_19360;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012135906.1;locus_tag=J4731_19360;product=phage portal protein;pseudo=true;transl_table=11
JAGETS010000061.1	Genbank	pseudogene	29404	30263	.	+	.	ID=gene-J4731_19365;Name=J4731_19365;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_19365;pseudo=true
JAGETS010000061.1	Protein Homology	CDS	29404	30263	.	+	0	ID=cds-J4731_19365;Parent=gene-J4731_19365;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005174465.1;locus_tag=J4731_19365;product=S49 family peptidase;pseudo=true;transl_table=11
JAGETS010000061.1	Genbank	pseudogene	30265	30839	.	+	.	ID=gene-J4731_19370;Name=J4731_19370;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_19370;pseudo=true
JAGETS010000061.1	Protein Homology	CDS	30265	30839	.	+	0	ID=cds-J4731_19370;Parent=gene-J4731_19370;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012906772.1;locus_tag=J4731_19370;product=hypothetical protein;pseudo=true;transl_table=11
JAGETS010000061.1	Genbank	pseudogene	30843	31223	.	+	.	ID=gene-J4731_19375;Name=J4731_19375;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_19375;pseudo=true
JAGETS010000061.1	Protein Homology	CDS	30843	31223	.	+	0	ID=cds-J4731_19375;Parent=gene-J4731_19375;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004904834.1;locus_tag=J4731_19375;product=head decoration protein;pseudo=true;transl_table=11
JAGETS010000061.1	Genbank	pseudogene	31342	32320	.	+	.	ID=gene-J4731_19380;Name=J4731_19380;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_19380;pseudo=true
JAGETS010000061.1	Protein Homology	CDS	31342	32320	.	+	0	ID=cds-J4731_19380;Parent=gene-J4731_19380;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004169542.1;locus_tag=J4731_19380;product=major capsid protein;pseudo=true;transl_table=11
JAGETS010000061.1	Genbank	pseudogene	32701	33030	.	+	.	ID=gene-J4731_19385;Name=J4731_19385;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_19385;pseudo=true
JAGETS010000061.1	Protein Homology	CDS	32701	33030	.	+	0	ID=cds-J4731_19385;Parent=gene-J4731_19385;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009112623.1;locus_tag=J4731_19385;product=hypothetical protein;pseudo=true;transl_table=11
JAGETS010000061.1	Genbank	pseudogene	33027	33560	.	+	.	ID=gene-J4731_19390;Name=J4731_19390;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_19390;pseudo=true
JAGETS010000061.1	Protein Homology	CDS	33027	33560	.	+	0	ID=cds-J4731_19390;Parent=gene-J4731_19390;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004904826.1;locus_tag=J4731_19390;product=ATP-binding protein;pseudo=true;transl_table=11
JAGETS010000061.1	Genbank	gene	33579	33770	.	+	.	ID=gene-J4731_19395;Name=J4731_19395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_19395
JAGETS010000061.1	Protein Homology	CDS	33579	33770	.	+	0	ID=cds-MBO1929606.1;Parent=gene-J4731_19395;Dbxref=NCBI_GP:MBO1929606.1;Name=MBO1929606.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004904824.1;locus_tag=J4731_19395;product=DUF2635 domain-containing protein;protein_id=MBO1929606.1;transl_table=11
JAGETS010000061.1	Genbank	pseudogene	33739	35217	.	+	.	ID=gene-J4731_19400;Name=J4731_19400;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_19400;pseudo=true
JAGETS010000061.1	Protein Homology	CDS	33739	35217	.	+	0	ID=cds-J4731_19400;Parent=gene-J4731_19400;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004708661.1;locus_tag=J4731_19400;product=phage tail sheath subtilisin-like domain-containing protein;pseudo=true;transl_table=11
JAGETS010000061.1	Genbank	pseudogene	35289	35587	.	+	.	ID=gene-J4731_19405;Name=J4731_19405;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_19405;pseudo=true
JAGETS010000061.1	Protein Homology	CDS	35289	35587	.	+	0	ID=cds-J4731_19405;Parent=gene-J4731_19405;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015873426.1;locus_tag=J4731_19405;product=phage tail tube protein;pseudo=true;transl_table=11
JAGETS010000061.1	Genbank	gene	35990	36241	.	+	.	ID=gene-J4731_19410;Name=J4731_19410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_19410
JAGETS010000061.1	GeneMarkS-2+	CDS	35990	36241	.	+	0	ID=cds-MBO1929607.1;Parent=gene-J4731_19410;Dbxref=NCBI_GP:MBO1929607.1;Name=MBO1929607.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_19410;product=hypothetical protein;protein_id=MBO1929607.1;transl_table=11
JAGETS010000061.1	Genbank	gene	36238	36405	.	+	.	ID=gene-J4731_19415;Name=J4731_19415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_19415
JAGETS010000061.1	GeneMarkS-2+	CDS	36238	36405	.	+	0	ID=cds-MBO1929608.1;Parent=gene-J4731_19415;Dbxref=NCBI_GP:MBO1929608.1;Name=MBO1929608.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_19415;product=hypothetical protein;protein_id=MBO1929608.1;transl_table=11
JAGETS010000061.1	Genbank	gene	36378	36611	.	+	.	ID=gene-J4731_19420;Name=J4731_19420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_19420
JAGETS010000061.1	GeneMarkS-2+	CDS	36378	36611	.	+	0	ID=cds-MBO1929609.1;Parent=gene-J4731_19420;Dbxref=NCBI_GP:MBO1929609.1;Name=MBO1929609.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_19420;product=hypothetical protein;protein_id=MBO1929609.1;transl_table=11
JAGETS010000061.1	Genbank	gene	36612	37007	.	+	.	ID=gene-J4731_19425;Name=J4731_19425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_19425
JAGETS010000061.1	GeneMarkS-2+	CDS	36612	37007	.	+	0	ID=cds-MBO1929610.1;Parent=gene-J4731_19425;Dbxref=NCBI_GP:MBO1929610.1;Name=MBO1929610.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_19425;product=hypothetical protein;protein_id=MBO1929610.1;transl_table=11
JAGETS010000061.1	Genbank	gene	37400	37684	.	+	.	ID=gene-J4731_19430;Name=J4731_19430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_19430
JAGETS010000061.1	GeneMarkS-2+	CDS	37400	37684	.	+	0	ID=cds-MBO1929611.1;Parent=gene-J4731_19430;Dbxref=NCBI_GP:MBO1929611.1;Name=MBO1929611.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_19430;product=hypothetical protein;protein_id=MBO1929611.1;transl_table=11
JAGETS010000061.1	Genbank	gene	37751	37924	.	-	.	ID=gene-J4731_19435;Name=J4731_19435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_19435
JAGETS010000061.1	GeneMarkS-2+	CDS	37751	37924	.	-	0	ID=cds-MBO1929612.1;Parent=gene-J4731_19435;Dbxref=NCBI_GP:MBO1929612.1;Name=MBO1929612.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_19435;product=hypothetical protein;protein_id=MBO1929612.1;transl_table=11
JAGETS010000061.1	Genbank	pseudogene	37854	38511	.	+	.	ID=gene-J4731_19440;Name=J4731_19440;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_19440;pseudo=true
JAGETS010000061.1	Protein Homology	CDS	37854	38511	.	+	0	ID=cds-J4731_19440;Parent=gene-J4731_19440;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004918873.1;locus_tag=J4731_19440;product=DUF4431 domain-containing protein;pseudo=true;transl_table=11
JAGETS010000061.1	Genbank	gene	38982	39293	.	+	.	ID=gene-J4731_19445;Name=J4731_19445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_19445
JAGETS010000061.1	Protein Homology	CDS	38982	39293	.	+	0	ID=cds-MBO1929613.1;Parent=gene-J4731_19445;Dbxref=NCBI_GP:MBO1929613.1;Name=MBO1929613.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018818.1;locus_tag=J4731_19445;product=DNA circularization N-terminal domain-containing protein;protein_id=MBO1929613.1;transl_table=11
JAGETS010000061.1	Genbank	gene	39335	39478	.	+	.	ID=gene-J4731_19450;Name=J4731_19450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_19450
JAGETS010000061.1	GeneMarkS-2+	CDS	39335	39478	.	+	0	ID=cds-MBO1929614.1;Parent=gene-J4731_19450;Dbxref=NCBI_GP:MBO1929614.1;Name=MBO1929614.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_19450;product=hypothetical protein;protein_id=MBO1929614.1;transl_table=11
JAGETS010000061.1	Genbank	gene	39869	40225	.	+	.	ID=gene-J4731_19455;Name=J4731_19455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_19455
JAGETS010000061.1	GeneMarkS-2+	CDS	39869	40225	.	+	0	ID=cds-MBO1929615.1;Parent=gene-J4731_19455;Dbxref=NCBI_GP:MBO1929615.1;Name=MBO1929615.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_19455;product=hypothetical protein;protein_id=MBO1929615.1;transl_table=11
JAGETS010000061.1	Genbank	pseudogene	40370	41429	.	+	.	ID=gene-J4731_19460;Name=J4731_19460;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_19460;pseudo=true
JAGETS010000061.1	Protein Homology	CDS	40370	41429	.	+	0	ID=cds-J4731_19460;Parent=gene-J4731_19460;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004904800.1;locus_tag=J4731_19460;product=phage tail protein;pseudo=true;transl_table=11
JAGETS010000061.1	Genbank	pseudogene	41471	42043	.	+	.	ID=gene-J4731_19465;Name=J4731_19465;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_19465;pseudo=true
JAGETS010000061.1	Protein Homology	CDS	41471	42043	.	+	0	ID=cds-J4731_19465;Parent=gene-J4731_19465;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208849.1;locus_tag=J4731_19465;product=phage baseplate assembly protein;pseudo=true;transl_table=11
JAGETS010000061.1	Genbank	pseudogene	42012	42421	.	+	.	ID=gene-J4731_19470;Name=J4731_19470;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_19470;pseudo=true
JAGETS010000061.1	Protein Homology	CDS	42012	42421	.	+	0	ID=cds-J4731_19470;Parent=gene-J4731_19470;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004904794.1;locus_tag=J4731_19470;product=phage GP46 family protein;pseudo=true;transl_table=11
JAGETS010000061.1	Genbank	pseudogene	42438	43542	.	+	.	ID=gene-J4731_19475;Name=J4731_19475;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_19475;pseudo=true
JAGETS010000061.1	Protein Homology	CDS	42438	43542	.	+	0	ID=cds-J4731_19475;Parent=gene-J4731_19475;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001116108.1;locus_tag=J4731_19475;product=baseplate J/gp47 family protein;pseudo=true;transl_table=11
JAGETS010000061.1	Genbank	pseudogene	43555	43842	.	+	.	ID=gene-J4731_19480;Name=J4731_19480;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_19480;pseudo=true
JAGETS010000061.1	Protein Homology	CDS	43555	43842	.	+	0	ID=cds-J4731_19480;Parent=gene-J4731_19480;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002215458.1;locus_tag=J4731_19480;product=hypothetical protein;pseudo=true;transl_table=11
JAGETS010000061.1	Genbank	gene	43965	44141	.	+	.	ID=gene-J4731_19485;Name=J4731_19485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_19485
JAGETS010000061.1	GeneMarkS-2+	CDS	43965	44141	.	+	0	ID=cds-MBO1929616.1;Parent=gene-J4731_19485;Dbxref=NCBI_GP:MBO1929616.1;Name=MBO1929616.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_19485;product=hypothetical protein;protein_id=MBO1929616.1;transl_table=11
JAGETS010000061.1	Genbank	gene	44715	45041	.	+	.	ID=gene-J4731_19490;Name=J4731_19490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_19490
JAGETS010000061.1	GeneMarkS-2+	CDS	44715	45041	.	+	0	ID=cds-MBO1929617.1;Parent=gene-J4731_19490;Dbxref=NCBI_GP:MBO1929617.1;Name=MBO1929617.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_19490;product=hypothetical protein;protein_id=MBO1929617.1;transl_table=11
JAGETS010000061.1	Genbank	gene	45950	46099	.	+	.	ID=gene-J4731_19495;Name=J4731_19495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_19495
JAGETS010000061.1	GeneMarkS-2+	CDS	45950	46099	.	+	0	ID=cds-MBO1929618.1;Parent=gene-J4731_19495;Dbxref=NCBI_GP:MBO1929618.1;Name=MBO1929618.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_19495;product=hypothetical protein;protein_id=MBO1929618.1;transl_table=11
JAGETS010000061.1	Genbank	gene	46259	46335	.	-	.	ID=gene-J4731_19500;Name=J4731_19500;gbkey=Gene;gene_biotype=tRNA;locus_tag=J4731_19500
JAGETS010000061.1	tRNAscan-SE	tRNA	46259	46335	.	-	.	ID=rna-J4731_19500;Parent=gene-J4731_19500;anticodon=(pos:complement(46299..46301));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=J4731_19500;product=tRNA-Pro
JAGETS010000061.1	tRNAscan-SE	exon	46259	46335	.	-	.	ID=exon-J4731_19500-1;Parent=rna-J4731_19500;anticodon=(pos:complement(46299..46301));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=J4731_19500;product=tRNA-Pro
JAGETS010000061.1	Genbank	pseudogene	46409	48106	.	-	.	ID=gene-J4731_19505;Name=yejM;gbkey=Gene;gene=yejM;gene_biotype=pseudogene;locus_tag=J4731_19505;pseudo=true
JAGETS010000061.1	Protein Homology	CDS	46409	48106	.	-	0	ID=cds-J4731_19505;Parent=gene-J4731_19505;Note=frameshifted;gbkey=CDS;gene=yejM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004920906.1;locus_tag=J4731_19505;product=LPS biosynthesis-modulating metalloenzyme YejM;pseudo=true;transl_table=11
JAGETS010000061.1	Genbank	pseudogene	48128	48351	.	-	.	ID=gene-J4731_19510;Name=J4731_19510;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_19510;pseudo=true
JAGETS010000061.1	Protein Homology	CDS	48128	48351	.	-	0	ID=cds-J4731_19510;Parent=gene-J4731_19510;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004700534.1;locus_tag=J4731_19510;product=YejL family protein;pseudo=true;transl_table=11
JAGETS010000061.1	Genbank	pseudogene	48591	49580	.	+	.	ID=gene-J4731_19515;Name=yejK;gbkey=Gene;gene=yejK;gene_biotype=pseudogene;locus_tag=J4731_19515;pseudo=true
JAGETS010000061.1	Protein Homology	CDS	48591	49580	.	+	0	ID=cds-J4731_19515;Parent=gene-J4731_19515;Note=frameshifted;gbkey=CDS;gene=yejK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304331.1;locus_tag=J4731_19515;product=nucleoid-associated protein YejK;pseudo=true;transl_table=11
JAGETS010000061.1	Genbank	pseudogene	49675	49950	.	-	.	ID=gene-J4731_19520;Name=rplY;gbkey=Gene;gene=rplY;gene_biotype=pseudogene;locus_tag=J4731_19520;pseudo=true
JAGETS010000061.1	Protein Homology	CDS	49675	49950	.	-	0	ID=cds-J4731_19520;Parent=gene-J4731_19520;Note=frameshifted;gbkey=CDS;gene=rplY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011147089.1;locus_tag=J4731_19520;product=50S ribosomal protein L25;pseudo=true;transl_table=11
JAGETS010000061.1	Genbank	pseudogene	50111	51822	.	-	.	ID=gene-J4731_19525;Name=J4731_19525;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_19525;pseudo=true
JAGETS010000061.1	Protein Homology	CDS	50111	51822	.	-	0	ID=cds-J4731_19525;Parent=gene-J4731_19525;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416689.1;locus_tag=J4731_19525;product=DEAD/DEAH box helicase;pseudo=true;transl_table=11
JAGETS010000061.1	Genbank	pseudogene	52045	52745	.	+	.	ID=gene-J4731_19530;Name=rsuA;gbkey=Gene;gene=rsuA;gene_biotype=pseudogene;locus_tag=J4731_19530;pseudo=true
JAGETS010000061.1	Protein Homology	CDS	52045	52745	.	+	0	ID=cds-J4731_19530;Parent=gene-J4731_19530;Note=frameshifted;gbkey=CDS;gene=rsuA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017383401.1;locus_tag=J4731_19530;product=16S rRNA pseudouridine(516) synthase RsuA;pseudo=true;transl_table=11
JAGETS010000061.1	Genbank	pseudogene	52820	53917	.	+	.	ID=gene-J4731_19535;Name=J4731_19535;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_19535;pseudo=true
JAGETS010000061.1	Protein Homology	CDS	52820	53917	.	+	0	ID=cds-J4731_19535;Parent=gene-J4731_19535;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000213361.1;locus_tag=J4731_19535;product=Bcr/CflA family multidrug efflux MFS transporter;pseudo=true;transl_table=11
JAGETS010000061.1	Genbank	pseudogene	54569	54887	.	+	.	ID=gene-J4731_19540;Name=J4731_19540;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_19540;pseudo=true
JAGETS010000061.1	Protein Homology	CDS	54569	54887	.	+	0	ID=cds-J4731_19540;Parent=gene-J4731_19540;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005967255.1;locus_tag=J4731_19540;product=hypothetical protein;pseudo=true;transl_table=11
JAGETS010000061.1	Genbank	pseudogene	55145	55723	.	-	.	ID=gene-J4731_19545;Name=mepS;gbkey=Gene;gene=mepS;gene_biotype=pseudogene;locus_tag=J4731_19545;pseudo=true
JAGETS010000061.1	Protein Homology	CDS	55145	55723	.	-	0	ID=cds-J4731_19545;Parent=gene-J4731_19545;Note=frameshifted;gbkey=CDS;gene=mepS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004920890.1;locus_tag=J4731_19545;product=bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase;pseudo=true;transl_table=11
##sequence-region JAGETS010000062.1 1 54718
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=587
JAGETS010000062.1	Genbank	region	1	54718	.	+	.	ID=JAGETS010000062.1:1..54718;Dbxref=taxon:587;collected-by=NHLS;collection-date=2018;country=South Africa: Pretoria;gbkey=Src;isolation-source=stool;lat-lon=25.7479 S 28.2293 E;mol_type=genomic DNA;nat-host=porcine;strain=SG003
JAGETS010000062.1	Genbank	pseudogene	1	319	.	-	.	ID=gene-J4731_19550;Name=J4731_19550;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_19550;pseudo=true
JAGETS010000062.1	Protein Homology	CDS	1	319	.	-	0	ID=cds-J4731_19550;Parent=gene-J4731_19550;Note=frameshifted%3B incomplete%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_072749366.1;locus_tag=J4731_19550;product=transposase;pseudo=true;transl_table=11
JAGETS010000062.1	Genbank	gene	575	1165	.	-	.	ID=gene-J4731_19555;Name=J4731_19555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_19555
JAGETS010000062.1	Protein Homology	CDS	575	1165	.	-	0	ID=cds-MBO1929619.1;Parent=gene-J4731_19555;Dbxref=NCBI_GP:MBO1929619.1;Name=MBO1929619.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015532.1;locus_tag=J4731_19555;product=OprD family outer membrane porin;protein_id=MBO1929619.1;transl_table=11
JAGETS010000062.1	Genbank	gene	1245	1712	.	-	.	ID=gene-J4731_19560;Name=J4731_19560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_19560
JAGETS010000062.1	Protein Homology	CDS	1245	1712	.	-	0	ID=cds-MBO1929620.1;Parent=gene-J4731_19560;Dbxref=NCBI_GP:MBO1929620.1;Name=MBO1929620.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015532.1;locus_tag=J4731_19560;product=OprD family outer membrane porin;protein_id=MBO1929620.1;transl_table=11
JAGETS010000062.1	Genbank	gene	2338	2649	.	+	.	ID=gene-J4731_19565;Name=J4731_19565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_19565
JAGETS010000062.1	GeneMarkS-2+	CDS	2338	2649	.	+	0	ID=cds-MBO1929621.1;Parent=gene-J4731_19565;Dbxref=NCBI_GP:MBO1929621.1;Name=MBO1929621.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_19565;product=hypothetical protein;protein_id=MBO1929621.1;transl_table=11
JAGETS010000062.1	Genbank	pseudogene	2998	3105	.	+	.	ID=gene-J4731_19570;Name=J4731_19570;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_19570;pseudo=true
JAGETS010000062.1	Protein Homology	CDS	2998	3105	.	+	0	ID=cds-J4731_19570;Parent=gene-J4731_19570;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR04085.1;locus_tag=J4731_19570;product=hypothetical protein;pseudo=true;transl_table=11
JAGETS010000062.1	Genbank	pseudogene	3291	4030	.	-	.	ID=gene-J4731_19575;Name=deoD;gbkey=Gene;gene=deoD;gene_biotype=pseudogene;locus_tag=J4731_19575;pseudo=true
JAGETS010000062.1	Protein Homology	CDS	3291	4030	.	-	0	ID=cds-J4731_19575;Parent=gene-J4731_19575;Note=frameshifted;gbkey=CDS;gene=deoD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004846800.1;locus_tag=J4731_19575;product=purine-nucleoside phosphorylase;pseudo=true;transl_table=11
JAGETS010000062.1	Genbank	gene	4609	4803	.	-	.	ID=gene-J4731_19580;Name=J4731_19580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_19580
JAGETS010000062.1	GeneMarkS-2+	CDS	4609	4803	.	-	0	ID=cds-MBO1929622.1;Parent=gene-J4731_19580;Dbxref=NCBI_GP:MBO1929622.1;Name=MBO1929622.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_19580;product=hypothetical protein;protein_id=MBO1929622.1;transl_table=11
JAGETS010000062.1	Genbank	gene	4939	5130	.	-	.	ID=gene-J4731_19585;Name=J4731_19585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_19585
JAGETS010000062.1	GeneMarkS-2+	CDS	4939	5130	.	-	0	ID=cds-MBO1929623.1;Parent=gene-J4731_19585;Dbxref=NCBI_GP:MBO1929623.1;Name=MBO1929623.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_19585;product=hypothetical protein;protein_id=MBO1929623.1;transl_table=11
JAGETS010000062.1	Genbank	gene	5757	6575	.	+	.	ID=gene-J4731_19590;Name=J4731_19590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_19590
JAGETS010000062.1	Protein Homology	CDS	5757	6575	.	+	0	ID=cds-MBO1929624.1;Parent=gene-J4731_19590;Dbxref=NCBI_GP:MBO1929624.1;Name=MBO1929624.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013080.1;locus_tag=J4731_19590;product=sulfatase-like hydrolase/transferase;protein_id=MBO1929624.1;transl_table=11
JAGETS010000062.1	Genbank	pseudogene	6676	7923	.	-	.	ID=gene-J4731_19595;Name=J4731_19595;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_19595;pseudo=true
JAGETS010000062.1	Protein Homology	CDS	6676	7923	.	-	0	ID=cds-J4731_19595;Parent=gene-J4731_19595;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004261167.1;locus_tag=J4731_19595;product=septum formation protein;pseudo=true;transl_table=11
JAGETS010000062.1	Genbank	pseudogene	8188	9535	.	-	.	ID=gene-J4731_19600;Name=dcuC;gbkey=Gene;gene=dcuC;gene_biotype=pseudogene;locus_tag=J4731_19600;pseudo=true
JAGETS010000062.1	Protein Homology	CDS	8188	9535	.	-	0	ID=cds-J4731_19600;Parent=gene-J4731_19600;Note=frameshifted;gbkey=CDS;gene=dcuC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004699401.1;locus_tag=J4731_19600;product=anaerobic C4-dicarboxylate transporter DcuC;pseudo=true;transl_table=11
JAGETS010000062.1	Genbank	pseudogene	9745	10968	.	-	.	ID=gene-J4731_19605;Name=J4731_19605;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_19605;pseudo=true
JAGETS010000062.1	Protein Homology	CDS	9745	10968	.	-	0	ID=cds-J4731_19605;Parent=gene-J4731_19605;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226683.1;locus_tag=J4731_19605;product=carbohydrate porin;pseudo=true;transl_table=11
JAGETS010000062.1	Genbank	gene	10997	11131	.	-	.	ID=gene-J4731_19610;Name=J4731_19610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_19610
JAGETS010000062.1	Protein Homology	CDS	10997	11131	.	-	0	ID=cds-MBO1929625.1;Parent=gene-J4731_19610;Dbxref=NCBI_GP:MBO1929625.1;Name=MBO1929625.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022910.1;locus_tag=J4731_19610;product=carbohydrate porin;protein_id=MBO1929625.1;transl_table=11
JAGETS010000062.1	Genbank	pseudogene	11406	11818	.	-	.	ID=gene-J4731_19615;Name=J4731_19615;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_19615;pseudo=true
JAGETS010000062.1	Protein Homology	CDS	11406	11818	.	-	0	ID=cds-J4731_19615;Parent=gene-J4731_19615;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004261175.1;locus_tag=J4731_19615;product=regulatory protein RecX;pseudo=true;transl_table=11
JAGETS010000062.1	Genbank	pseudogene	12115	13564	.	-	.	ID=gene-J4731_19620;Name=J4731_19620;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_19620;pseudo=true
JAGETS010000062.1	Protein Homology	CDS	12115	13564	.	-	0	ID=cds-J4731_19620;Parent=gene-J4731_19620;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004249059.1;locus_tag=J4731_19620;product=DUF4026 domain-containing protein;pseudo=true;transl_table=11
JAGETS010000062.1	Genbank	gene	13931	14074	.	+	.	ID=gene-J4731_19625;Name=J4731_19625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_19625
JAGETS010000062.1	GeneMarkS-2+	CDS	13931	14074	.	+	0	ID=cds-MBO1929626.1;Parent=gene-J4731_19625;Dbxref=NCBI_GP:MBO1929626.1;Name=MBO1929626.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_19625;product=hypothetical protein;protein_id=MBO1929626.1;transl_table=11
JAGETS010000062.1	Genbank	pseudogene	14217	15209	.	+	.	ID=gene-J4731_19630;Name=J4731_19630;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_19630;pseudo=true
JAGETS010000062.1	Protein Homology	CDS	14217	15209	.	+	0	ID=cds-J4731_19630;Parent=gene-J4731_19630;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014656912.1;locus_tag=J4731_19630;product=hypothetical protein;pseudo=true;transl_table=11
JAGETS010000062.1	Genbank	pseudogene	15211	16346	.	+	.	ID=gene-J4731_19635;Name=J4731_19635;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_19635;pseudo=true
JAGETS010000062.1	Protein Homology	CDS	15211	16346	.	+	0	ID=cds-J4731_19635;Parent=gene-J4731_19635;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004261183.1;locus_tag=J4731_19635;product=BamA/TamA family outer membrane protein;pseudo=true;transl_table=11
JAGETS010000062.1	Genbank	pseudogene	16348	17485	.	+	.	ID=gene-J4731_19640;Name=J4731_19640;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_19640;pseudo=true
JAGETS010000062.1	Protein Homology	CDS	16348	17485	.	+	0	ID=cds-J4731_19640;Parent=gene-J4731_19640;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004261185.1;locus_tag=J4731_19640;product=DUF4056 domain-containing protein;pseudo=true;transl_table=11
JAGETS010000062.1	Genbank	pseudogene	17974	18804	.	+	.	ID=gene-J4731_19645;Name=J4731_19645;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_19645;pseudo=true
JAGETS010000062.1	Protein Homology	CDS	17974	18804	.	+	0	ID=cds-J4731_19645;Parent=gene-J4731_19645;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014656915.1;locus_tag=J4731_19645;product=protein bax;pseudo=true;transl_table=11
JAGETS010000062.1	Genbank	pseudogene	19316	20737	.	+	.	ID=gene-J4731_19650;Name=J4731_19650;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_19650;pseudo=true
JAGETS010000062.1	Protein Homology	CDS	19316	20737	.	+	0	ID=cds-J4731_19650;Parent=gene-J4731_19650;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008913753.1;locus_tag=J4731_19650;product=MBOAT family protein;pseudo=true;transl_table=11
JAGETS010000062.1	Genbank	pseudogene	20761	21866	.	+	.	ID=gene-J4731_19655;Name=J4731_19655;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_19655;pseudo=true
JAGETS010000062.1	Protein Homology	CDS	20761	21866	.	+	0	ID=cds-J4731_19655;Parent=gene-J4731_19655;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014656916.1;locus_tag=J4731_19655;product=DUF459 domain-containing protein;pseudo=true;transl_table=11
JAGETS010000062.1	Genbank	pseudogene	21838	23055	.	+	.	ID=gene-J4731_19660;Name=J4731_19660;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_19660;pseudo=true
JAGETS010000062.1	Protein Homology	CDS	21838	23055	.	+	0	ID=cds-J4731_19660;Parent=gene-J4731_19660;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004261200.1;locus_tag=J4731_19660;product=SGNH/GDSL hydrolase family protein;pseudo=true;transl_table=11
JAGETS010000062.1	Genbank	pseudogene	23557	24361	.	+	.	ID=gene-J4731_19665;Name=J4731_19665;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_19665;pseudo=true
JAGETS010000062.1	Protein Homology	CDS	23557	24361	.	+	0	ID=cds-J4731_19665;Parent=gene-J4731_19665;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006658227.1;locus_tag=J4731_19665;product=transcriptional regulator;pseudo=true;transl_table=11
JAGETS010000062.1	Genbank	gene	24425	24841	.	-	.	ID=gene-J4731_19670;Name=J4731_19670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_19670
JAGETS010000062.1	GeneMarkS-2+	CDS	24425	24841	.	-	0	ID=cds-MBO1929627.1;Parent=gene-J4731_19670;Dbxref=NCBI_GP:MBO1929627.1;Name=MBO1929627.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_19670;product=hypothetical protein;protein_id=MBO1929627.1;transl_table=11
JAGETS010000062.1	Genbank	gene	24831	25202	.	-	.	ID=gene-J4731_19675;Name=J4731_19675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_19675
JAGETS010000062.1	GeneMarkS-2+	CDS	24831	25202	.	-	0	ID=cds-MBO1929628.1;Parent=gene-J4731_19675;Dbxref=NCBI_GP:MBO1929628.1;Name=MBO1929628.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_19675;product=hypothetical protein;protein_id=MBO1929628.1;transl_table=11
JAGETS010000062.1	Genbank	gene	25918	26262	.	-	.	ID=gene-J4731_19680;Name=J4731_19680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_19680
JAGETS010000062.1	GeneMarkS-2+	CDS	25918	26262	.	-	0	ID=cds-MBO1929629.1;Parent=gene-J4731_19680;Dbxref=NCBI_GP:MBO1929629.1;Name=MBO1929629.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_19680;product=hypothetical protein;protein_id=MBO1929629.1;transl_table=11
JAGETS010000062.1	Genbank	gene	26396	26611	.	-	.	ID=gene-J4731_19685;Name=J4731_19685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_19685
JAGETS010000062.1	GeneMarkS-2+	CDS	26396	26611	.	-	0	ID=cds-MBO1929630.1;Parent=gene-J4731_19685;Dbxref=NCBI_GP:MBO1929630.1;Name=MBO1929630.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_19685;product=hypothetical protein;protein_id=MBO1929630.1;transl_table=11
JAGETS010000062.1	Genbank	gene	27039	27302	.	-	.	ID=gene-J4731_19690;Name=J4731_19690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_19690
JAGETS010000062.1	GeneMarkS-2+	CDS	27039	27302	.	-	0	ID=cds-MBO1929631.1;Parent=gene-J4731_19690;Dbxref=NCBI_GP:MBO1929631.1;Name=MBO1929631.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_19690;product=hypothetical protein;protein_id=MBO1929631.1;transl_table=11
JAGETS010000062.1	Genbank	gene	27481	27813	.	-	.	ID=gene-J4731_19695;Name=J4731_19695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_19695
JAGETS010000062.1	GeneMarkS-2+	CDS	27481	27813	.	-	0	ID=cds-MBO1929632.1;Parent=gene-J4731_19695;Dbxref=NCBI_GP:MBO1929632.1;Name=MBO1929632.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_19695;product=hypothetical protein;protein_id=MBO1929632.1;transl_table=11
JAGETS010000062.1	Genbank	gene	27966	28163	.	-	.	ID=gene-J4731_19700;Name=J4731_19700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_19700
JAGETS010000062.1	GeneMarkS-2+	CDS	27966	28163	.	-	0	ID=cds-MBO1929633.1;Parent=gene-J4731_19700;Dbxref=NCBI_GP:MBO1929633.1;Name=MBO1929633.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_19700;product=hypothetical protein;protein_id=MBO1929633.1;transl_table=11
JAGETS010000062.1	Genbank	gene	28623	29072	.	-	.	ID=gene-J4731_19705;Name=J4731_19705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_19705
JAGETS010000062.1	GeneMarkS-2+	CDS	28623	29072	.	-	0	ID=cds-MBO1929634.1;Parent=gene-J4731_19705;Dbxref=NCBI_GP:MBO1929634.1;Name=MBO1929634.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_19705;product=Ig-like domain repeat protein;protein_id=MBO1929634.1;transl_table=11
JAGETS010000062.1	Genbank	gene	29230	29388	.	-	.	ID=gene-J4731_19710;Name=J4731_19710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_19710
JAGETS010000062.1	Protein Homology	CDS	29230	29388	.	-	0	ID=cds-MBO1929635.1;Parent=gene-J4731_19710;Dbxref=NCBI_GP:MBO1929635.1;Name=MBO1929635.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF037006.1;locus_tag=J4731_19710;product=hypothetical protein;protein_id=MBO1929635.1;transl_table=11
JAGETS010000062.1	Genbank	gene	30010	30774	.	-	.	ID=gene-J4731_19715;Name=J4731_19715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_19715
JAGETS010000062.1	Protein Homology	CDS	30010	30774	.	-	0	ID=cds-MBO1929636.1;Parent=gene-J4731_19715;Dbxref=NCBI_GP:MBO1929636.1;Name=MBO1929636.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF033510.3;locus_tag=J4731_19715;product=hypothetical protein;protein_id=MBO1929636.1;transl_table=11
JAGETS010000062.1	Genbank	gene	30775	31047	.	-	.	ID=gene-J4731_19720;Name=J4731_19720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_19720
JAGETS010000062.1	GeneMarkS-2+	CDS	30775	31047	.	-	0	ID=cds-MBO1929637.1;Parent=gene-J4731_19720;Dbxref=NCBI_GP:MBO1929637.1;Name=MBO1929637.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_19720;product=hypothetical protein;protein_id=MBO1929637.1;transl_table=11
JAGETS010000062.1	Genbank	gene	31225	31527	.	-	.	ID=gene-J4731_19725;Name=J4731_19725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_19725
JAGETS010000062.1	GeneMarkS-2+	CDS	31225	31527	.	-	0	ID=cds-MBO1929638.1;Parent=gene-J4731_19725;Dbxref=NCBI_GP:MBO1929638.1;Name=MBO1929638.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_19725;product=hypothetical protein;protein_id=MBO1929638.1;transl_table=11
JAGETS010000062.1	Genbank	gene	32495	32659	.	-	.	ID=gene-J4731_19730;Name=J4731_19730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_19730
JAGETS010000062.1	GeneMarkS-2+	CDS	32495	32659	.	-	0	ID=cds-MBO1929639.1;Parent=gene-J4731_19730;Dbxref=NCBI_GP:MBO1929639.1;Name=MBO1929639.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_19730;product=hypothetical protein;protein_id=MBO1929639.1;transl_table=11
JAGETS010000062.1	Genbank	gene	32625	32921	.	-	.	ID=gene-J4731_19735;Name=J4731_19735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_19735
JAGETS010000062.1	GeneMarkS-2+	CDS	32625	32921	.	-	0	ID=cds-MBO1929640.1;Parent=gene-J4731_19735;Dbxref=NCBI_GP:MBO1929640.1;Name=MBO1929640.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_19735;product=hypothetical protein;protein_id=MBO1929640.1;transl_table=11
JAGETS010000062.1	Genbank	pseudogene	33142	33592	.	+	.	ID=gene-J4731_19740;Name=J4731_19740;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_19740;pseudo=true
JAGETS010000062.1	Protein Homology	CDS	33142	33592	.	+	0	ID=cds-J4731_19740;Parent=gene-J4731_19740;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006663361.1;locus_tag=J4731_19740;product=hypothetical protein;pseudo=true;transl_table=11
JAGETS010000062.1	Genbank	gene	33918	34274	.	+	.	ID=gene-J4731_19745;Name=J4731_19745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_19745
JAGETS010000062.1	GeneMarkS-2+	CDS	33918	34274	.	+	0	ID=cds-MBO1929641.1;Parent=gene-J4731_19745;Dbxref=NCBI_GP:MBO1929641.1;Name=MBO1929641.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_19745;product=hypothetical protein;protein_id=MBO1929641.1;transl_table=11
JAGETS010000062.1	Genbank	pseudogene	34448	35662	.	+	.	ID=gene-J4731_19750;Name=J4731_19750;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_19750;pseudo=true
JAGETS010000062.1	Protein Homology	CDS	34448	35662	.	+	0	ID=cds-J4731_19750;Parent=gene-J4731_19750;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004261227.1;locus_tag=J4731_19750;product=TolC family protein;pseudo=true;transl_table=11
JAGETS010000062.1	Genbank	pseudogene	35643	36881	.	+	.	ID=gene-J4731_19755;Name=J4731_19755;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_19755;pseudo=true
JAGETS010000062.1	Protein Homology	CDS	35643	36881	.	+	0	ID=cds-J4731_19755;Parent=gene-J4731_19755;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006663364.1;locus_tag=J4731_19755;product=HlyD family efflux transporter periplasmic adaptor subunit;pseudo=true;transl_table=11
JAGETS010000062.1	Genbank	pseudogene	36885	37362	.	+	.	ID=gene-J4731_19760;Name=J4731_19760;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_19760;pseudo=true
JAGETS010000062.1	Protein Homology	CDS	36885	37362	.	+	0	ID=cds-J4731_19760;Parent=gene-J4731_19760;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004261231.1;locus_tag=J4731_19760;product=hypothetical protein;pseudo=true;transl_table=11
JAGETS010000062.1	Genbank	pseudogene	37349	39318	.	+	.	ID=gene-J4731_19765;Name=J4731_19765;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_19765;pseudo=true
JAGETS010000062.1	Protein Homology	CDS	37349	39318	.	+	0	ID=cds-J4731_19765;Parent=gene-J4731_19765;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006658556.1;locus_tag=J4731_19765;product=ATP-binding cassette domain-containing protein;pseudo=true;transl_table=11
JAGETS010000062.1	Genbank	pseudogene	39393	40738	.	-	.	ID=gene-J4731_19770;Name=gntU;gbkey=Gene;gene=gntU;gene_biotype=pseudogene;locus_tag=J4731_19770;pseudo=true
JAGETS010000062.1	Protein Homology	CDS	39393	40738	.	-	0	ID=cds-J4731_19770;Parent=gene-J4731_19770;Note=frameshifted;gbkey=CDS;gene=gntU;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006663367.1;locus_tag=J4731_19770;product=gluconate transporter;pseudo=true;transl_table=11
JAGETS010000062.1	Genbank	pseudogene	40738	41271	.	-	.	ID=gene-J4731_19775;Name=gntK;gbkey=Gene;gene=gntK;gene_biotype=pseudogene;locus_tag=J4731_19775;pseudo=true
JAGETS010000062.1	Protein Homology	CDS	40738	41271	.	-	0	ID=cds-J4731_19775;Parent=gene-J4731_19775;Note=frameshifted;gbkey=CDS;gene=gntK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004925965.1;locus_tag=J4731_19775;product=gluconokinase;pseudo=true;transl_table=11
JAGETS010000062.1	Genbank	pseudogene	41566	42637	.	-	.	ID=gene-J4731_19780;Name=gntR;gbkey=Gene;gene=gntR;gene_biotype=pseudogene;locus_tag=J4731_19780;pseudo=true
JAGETS010000062.1	Protein Homology	CDS	41566	42637	.	-	0	ID=cds-J4731_19780;Parent=gene-J4731_19780;Note=frameshifted;gbkey=CDS;gene=gntR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008913748.1;locus_tag=J4731_19780;product=gluconate operon transcriptional repressor GntR;pseudo=true;transl_table=11
JAGETS010000062.1	Genbank	pseudogene	42838	43869	.	+	.	ID=gene-J4731_19785;Name=J4731_19785;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_19785;pseudo=true
JAGETS010000062.1	Protein Homology	CDS	42838	43869	.	+	0	ID=cds-J4731_19785;Parent=gene-J4731_19785;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006663369.1;locus_tag=J4731_19785;product=ABC transporter substrate-binding protein;pseudo=true;transl_table=11
JAGETS010000062.1	Genbank	pseudogene	43877	44845	.	+	.	ID=gene-J4731_19790;Name=J4731_19790;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_19790;pseudo=true
JAGETS010000062.1	Protein Homology	CDS	43877	44845	.	+	0	ID=cds-J4731_19790;Parent=gene-J4731_19790;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010681545.1;locus_tag=J4731_19790;product=iron ABC transporter permease;pseudo=true;transl_table=11
JAGETS010000062.1	Genbank	pseudogene	44874	45638	.	+	.	ID=gene-J4731_19795;Name=J4731_19795;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_19795;pseudo=true
JAGETS010000062.1	Protein Homology	CDS	44874	45638	.	+	0	ID=cds-J4731_19795;Parent=gene-J4731_19795;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004261249.1;locus_tag=J4731_19795;product=ABC transporter ATP-binding protein;pseudo=true;transl_table=11
JAGETS010000062.1	Genbank	pseudogene	45650	46465	.	+	.	ID=gene-J4731_19800;Name=J4731_19800;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_19800;pseudo=true
JAGETS010000062.1	Protein Homology	CDS	45650	46465	.	+	0	ID=cds-J4731_19800;Parent=gene-J4731_19800;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004925948.1;locus_tag=J4731_19800;product=methyltransferase domain-containing protein;pseudo=true;transl_table=11
JAGETS010000062.1	Genbank	pseudogene	46462	47305	.	+	.	ID=gene-J4731_19805;Name=modD;gbkey=Gene;gene=modD;gene_biotype=pseudogene;locus_tag=J4731_19805;pseudo=true
JAGETS010000062.1	Protein Homology	CDS	46462	47305	.	+	0	ID=cds-J4731_19805;Parent=gene-J4731_19805;Note=frameshifted;gbkey=CDS;gene=modD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012368468.1;locus_tag=J4731_19805;product=ModD protein;pseudo=true;transl_table=11
JAGETS010000062.1	Genbank	pseudogene	47436	49413	.	+	.	ID=gene-J4731_19810;Name=J4731_19810;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_19810;pseudo=true
JAGETS010000062.1	Protein Homology	CDS	47436	49413	.	+	0	ID=cds-J4731_19810;Parent=gene-J4731_19810;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008913742.1;locus_tag=J4731_19810;product=TonB-dependent receptor;pseudo=true;transl_table=11
JAGETS010000062.1	Genbank	pseudogene	51360	52356	.	-	.	ID=gene-J4731_19815;Name=J4731_19815;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_19815;pseudo=true
JAGETS010000062.1	Protein Homology	CDS	51360	52356	.	-	0	ID=cds-J4731_19815;Parent=gene-J4731_19815;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008785375.1;locus_tag=J4731_19815;product=isoaspartyl peptidase/L-asparaginase;pseudo=true;transl_table=11
JAGETS010000062.1	Genbank	gene	52511	52696	.	-	.	ID=gene-J4731_19820;Name=J4731_19820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_19820
JAGETS010000062.1	Protein Homology	CDS	52511	52696	.	-	0	ID=cds-MBO1929642.1;Parent=gene-J4731_19820;Dbxref=NCBI_GP:MBO1929642.1;Name=MBO1929642.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014773.1;locus_tag=J4731_19820;product=hypothetical protein;protein_id=MBO1929642.1;transl_table=11
JAGETS010000062.1	Genbank	pseudogene	52899	53018	.	-	.	ID=gene-J4731_19825;Name=J4731_19825;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_19825;pseudo=true
JAGETS010000062.1	Protein Homology	CDS	52899	53018	.	-	0	ID=cds-J4731_19825;Parent=gene-J4731_19825;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012565.1;locus_tag=J4731_19825;product=fimbria/pilus periplasmic chaperone;pseudo=true;transl_table=11
JAGETS010000062.1	Genbank	gene	53307	53465	.	-	.	ID=gene-J4731_19830;Name=J4731_19830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_19830
JAGETS010000062.1	GeneMarkS-2+	CDS	53307	53465	.	-	0	ID=cds-MBO1929643.1;Parent=gene-J4731_19830;Dbxref=NCBI_GP:MBO1929643.1;Name=MBO1929643.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_19830;product=hypothetical protein;protein_id=MBO1929643.1;transl_table=11
JAGETS010000062.1	Genbank	gene	53555	54022	.	-	.	ID=gene-J4731_19835;Name=J4731_19835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_19835
JAGETS010000062.1	GeneMarkS-2+	CDS	53555	54022	.	-	0	ID=cds-MBO1929644.1;Parent=gene-J4731_19835;Dbxref=NCBI_GP:MBO1929644.1;Name=MBO1929644.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_19835;product=hypothetical protein;protein_id=MBO1929644.1;transl_table=11
##sequence-region JAGETS010000063.1 1 65676
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=587
JAGETS010000063.1	Genbank	region	1	65676	.	+	.	ID=JAGETS010000063.1:1..65676;Dbxref=taxon:587;collected-by=NHLS;collection-date=2018;country=South Africa: Pretoria;gbkey=Src;isolation-source=stool;lat-lon=25.7479 S 28.2293 E;mol_type=genomic DNA;nat-host=porcine;strain=SG003
JAGETS010000063.1	Genbank	pseudogene	1	1046	.	+	.	ID=gene-J4731_19840;Name=J4731_19840;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_19840;pseudo=true
JAGETS010000063.1	Protein Homology	CDS	1	1046	.	+	2	ID=cds-J4731_19840;Parent=gene-J4731_19840;Note=frameshifted%3B internal stop%3B incomplete%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227495.1;locus_tag=J4731_19840;product=iron-containing alcohol dehydrogenase;pseudo=true;transl_table=11
JAGETS010000063.1	Genbank	pseudogene	1272	1893	.	-	.	ID=gene-J4731_19845;Name=J4731_19845;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_19845;pseudo=true
JAGETS010000063.1	Protein Homology	CDS	1272	1893	.	-	0	ID=cds-J4731_19845;Parent=gene-J4731_19845;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004254108.1;locus_tag=J4731_19845;product=thymidine kinase;pseudo=true;transl_table=11
JAGETS010000063.1	Genbank	pseudogene	2423	2822	.	+	.	ID=gene-J4731_19850;Name=J4731_19850;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_19850;pseudo=true
JAGETS010000063.1	Protein Homology	CDS	2423	2822	.	+	0	ID=cds-J4731_19850;Parent=gene-J4731_19850;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005460020.1;locus_tag=J4731_19850;product=H-NS histone family protein;pseudo=true;transl_table=11
JAGETS010000063.1	Genbank	pseudogene	3283	4200	.	-	.	ID=gene-J4731_19855;Name=galU;gbkey=Gene;gene=galU;gene_biotype=pseudogene;locus_tag=J4731_19855;pseudo=true
JAGETS010000063.1	Protein Homology	CDS	3283	4200	.	-	0	ID=cds-J4731_19855;Parent=gene-J4731_19855;Note=frameshifted;gbkey=CDS;gene=galU;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006812885.1;locus_tag=J4731_19855;product=UTP--glucose-1-phosphate uridylyltransferase GalU;pseudo=true;transl_table=11
JAGETS010000063.1	Genbank	pseudogene	4359	5364	.	-	.	ID=gene-J4731_19860;Name=rssB;gbkey=Gene;gene=rssB;gene_biotype=pseudogene;locus_tag=J4731_19860;pseudo=true
JAGETS010000063.1	Protein Homology	CDS	4359	5364	.	-	0	ID=cds-J4731_19860;Parent=gene-J4731_19860;Note=frameshifted;gbkey=CDS;gene=rssB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004254095.1;locus_tag=J4731_19860;product=two-component system response regulator RssB;pseudo=true;transl_table=11
JAGETS010000063.1	Genbank	pseudogene	5490	6006	.	+	.	ID=gene-J4731_19865;Name=J4731_19865;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_19865;pseudo=true
JAGETS010000063.1	Protein Homology	CDS	5490	6006	.	+	0	ID=cds-J4731_19865;Parent=gene-J4731_19865;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004243253.1;locus_tag=J4731_19865;product=YchJ family protein;pseudo=true;transl_table=11
JAGETS010000063.1	Genbank	pseudogene	6075	6902	.	+	.	ID=gene-J4731_19870;Name=purU;gbkey=Gene;gene=purU;gene_biotype=pseudogene;locus_tag=J4731_19870;pseudo=true
JAGETS010000063.1	Protein Homology	CDS	6075	6902	.	+	0	ID=cds-J4731_19870;Parent=gene-J4731_19870;Note=frameshifted;gbkey=CDS;gene=purU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415748.1;locus_tag=J4731_19870;product=formyltetrahydrofolate deformylase;pseudo=true;transl_table=11
JAGETS010000063.1	Genbank	gene	7065	7149	.	+	.	ID=gene-J4731_19875;Name=J4731_19875;gbkey=Gene;gene_biotype=tRNA;locus_tag=J4731_19875
JAGETS010000063.1	tRNAscan-SE	tRNA	7065	7149	.	+	.	ID=rna-J4731_19875;Parent=gene-J4731_19875;anticodon=(pos:7099..7101);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=J4731_19875;product=tRNA-Tyr
JAGETS010000063.1	tRNAscan-SE	exon	7065	7149	.	+	.	ID=exon-J4731_19875-1;Parent=rna-J4731_19875;anticodon=(pos:7099..7101);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=J4731_19875;product=tRNA-Tyr
JAGETS010000063.1	Genbank	pseudogene	7151	8023	.	-	.	ID=gene-J4731_19880;Name=J4731_19880;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_19880;pseudo=true
JAGETS010000063.1	Protein Homology	CDS	7151	8023	.	-	0	ID=cds-J4731_19880;Parent=gene-J4731_19880;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004254087.1;locus_tag=J4731_19880;product=LysR family transcriptional regulator;pseudo=true;transl_table=11
JAGETS010000063.1	Genbank	pseudogene	8583	9391	.	+	.	ID=gene-J4731_19885;Name=xthA;gbkey=Gene;gene=xthA;gene_biotype=pseudogene;locus_tag=J4731_19885;pseudo=true
JAGETS010000063.1	Protein Homology	CDS	8583	9391	.	+	0	ID=cds-J4731_19885;Parent=gene-J4731_19885;Note=frameshifted;gbkey=CDS;gene=xthA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006661672.1;locus_tag=J4731_19885;product=exodeoxyribonuclease III;pseudo=true;transl_table=11
JAGETS010000063.1	Genbank	pseudogene	9480	11365	.	-	.	ID=gene-J4731_19890;Name=J4731_19890;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_19890;pseudo=true
JAGETS010000063.1	Protein Homology	CDS	9480	11365	.	-	0	ID=cds-J4731_19890;Parent=gene-J4731_19890;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004920303.1;locus_tag=J4731_19890;product=DNA topoisomerase III;pseudo=true;transl_table=11
JAGETS010000063.1	Genbank	gene	11369	11551	.	-	.	ID=gene-J4731_19895;Name=J4731_19895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_19895
JAGETS010000063.1	GeneMarkS-2+	CDS	11369	11551	.	-	0	ID=cds-MBO1929645.1;Parent=gene-J4731_19895;Dbxref=NCBI_GP:MBO1929645.1;Name=MBO1929645.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_19895;product=hypothetical protein;protein_id=MBO1929645.1;transl_table=11
JAGETS010000063.1	Genbank	gene	11581	11919	.	-	.	ID=gene-J4731_19900;Name=J4731_19900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_19900
JAGETS010000063.1	Protein Homology	CDS	11581	11919	.	-	0	ID=cds-MBO1929646.1;Parent=gene-J4731_19900;Dbxref=NCBI_GP:MBO1929646.1;Name=MBO1929646.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014788.1;locus_tag=J4731_19900;product=hypothetical protein;protein_id=MBO1929646.1;transl_table=11
JAGETS010000063.1	Genbank	pseudogene	11930	12395	.	-	.	ID=gene-J4731_19905;Name=selD;gbkey=Gene;gene=selD;gene_biotype=pseudogene;locus_tag=J4731_19905;pseudo=true
JAGETS010000063.1	Protein Homology	CDS	11930	12395	.	-	0	ID=cds-J4731_19905;Parent=gene-J4731_19905;Note=frameshifted;gbkey=CDS;gene=selD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020909986.1;locus_tag=J4731_19905;product=selenide%2C water dikinase SelD;pseudo=true;transl_table=11
JAGETS010000063.1	Genbank	pseudogene	12407	12951	.	-	.	ID=gene-J4731_19910;Name=J4731_19910;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_19910;pseudo=true
JAGETS010000063.1	Protein Homology	CDS	12407	12951	.	-	0	ID=cds-J4731_19910;Parent=gene-J4731_19910;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006536414.1;locus_tag=J4731_19910;product=NAD(P)H nitroreductase;pseudo=true;transl_table=11
JAGETS010000063.1	Genbank	pseudogene	13419	15256	.	+	.	ID=gene-J4731_19915;Name=sppA;gbkey=Gene;gene=sppA;gene_biotype=pseudogene;locus_tag=J4731_19915;pseudo=true
JAGETS010000063.1	Protein Homology	CDS	13419	15256	.	+	0	ID=cds-J4731_19915;Parent=gene-J4731_19915;Note=frameshifted%3B internal stop;gbkey=CDS;gene=sppA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019452760.1;locus_tag=J4731_19915;product=signal peptide peptidase SppA;pseudo=true;transl_table=11
JAGETS010000063.1	Genbank	pseudogene	15424	16439	.	+	.	ID=gene-J4731_19920;Name=ansA;gbkey=Gene;gene=ansA;gene_biotype=pseudogene;locus_tag=J4731_19920;pseudo=true
JAGETS010000063.1	Protein Homology	CDS	15424	16439	.	+	0	ID=cds-J4731_19920;Parent=gene-J4731_19920;Note=frameshifted;gbkey=CDS;gene=ansA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004920319.1;locus_tag=J4731_19920;product=asparaginase;pseudo=true;transl_table=11
JAGETS010000063.1	Genbank	pseudogene	16466	17089	.	+	.	ID=gene-J4731_19925;Name=pncA;gbkey=Gene;gene=pncA;gene_biotype=pseudogene;locus_tag=J4731_19925;pseudo=true
JAGETS010000063.1	Protein Homology	CDS	16466	17089	.	+	0	ID=cds-J4731_19925;Parent=gene-J4731_19925;Note=frameshifted;gbkey=CDS;gene=pncA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004254059.1;locus_tag=J4731_19925;product=bifunctional nicotinamidase/pyrazinamidase;pseudo=true;transl_table=11
JAGETS010000063.1	Genbank	pseudogene	17199	17466	.	-	.	ID=gene-J4731_19930;Name=J4731_19930;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_19930;pseudo=true
JAGETS010000063.1	Protein Homology	CDS	17199	17466	.	-	0	ID=cds-J4731_19930;Parent=gene-J4731_19930;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004248238.1;locus_tag=J4731_19930;product=DUF1315 family protein;pseudo=true;transl_table=11
JAGETS010000063.1	Genbank	gene	17412	17603	.	-	.	ID=gene-J4731_19935;Name=J4731_19935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_19935
JAGETS010000063.1	GeneMarkS-2+	CDS	17412	17603	.	-	0	ID=cds-MBO1929647.1;Parent=gene-J4731_19935;Dbxref=NCBI_GP:MBO1929647.1;Name=MBO1929647.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_19935;product=hypothetical protein;protein_id=MBO1929647.1;transl_table=11
JAGETS010000063.1	Genbank	pseudogene	17704	18043	.	-	.	ID=gene-J4731_19940;Name=J4731_19940;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_19940;pseudo=true
JAGETS010000063.1	Protein Homology	CDS	17704	18043	.	-	0	ID=cds-J4731_19940;Parent=gene-J4731_19940;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006658761.1;locus_tag=J4731_19940;product=peptide-methionine (R)-S-oxide reductase;pseudo=true;transl_table=11
JAGETS010000063.1	Genbank	pseudogene	18508	19389	.	+	.	ID=gene-J4731_19945;Name=J4731_19945;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_19945;pseudo=true
JAGETS010000063.1	Protein Homology	CDS	18508	19389	.	+	0	ID=cds-J4731_19945;Parent=gene-J4731_19945;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006322611.1;locus_tag=J4731_19945;product=type I glyceraldehyde-3-phosphate dehydrogenase;pseudo=true;transl_table=11
JAGETS010000063.1	Genbank	pseudogene	19646	20488	.	+	.	ID=gene-J4731_19950;Name=J4731_19950;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_19950;pseudo=true
JAGETS010000063.1	Protein Homology	CDS	19646	20488	.	+	0	ID=cds-J4731_19950;Parent=gene-J4731_19950;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015683942.1;locus_tag=J4731_19950;product=D-hexose-6-phosphate mutarotase;pseudo=true;transl_table=11
JAGETS010000063.1	Genbank	pseudogene	20596	21345	.	-	.	ID=gene-J4731_19955;Name=J4731_19955;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_19955;pseudo=true
JAGETS010000063.1	Protein Homology	CDS	20596	21345	.	-	0	ID=cds-J4731_19955;Parent=gene-J4731_19955;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004243270.1;locus_tag=J4731_19955;product=MipA/OmpV family protein;pseudo=true;transl_table=11
JAGETS010000063.1	Genbank	pseudogene	21481	22546	.	-	.	ID=gene-J4731_19960;Name=alr;gbkey=Gene;gene=alr;gene_biotype=pseudogene;locus_tag=J4731_19960;pseudo=true
JAGETS010000063.1	Protein Homology	CDS	21481	22546	.	-	0	ID=cds-J4731_19960;Parent=gene-J4731_19960;Note=frameshifted;gbkey=CDS;gene=alr;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006661652.1;locus_tag=J4731_19960;product=alanine racemase;pseudo=true;transl_table=11
JAGETS010000063.1	Genbank	pseudogene	22608	23885	.	-	.	ID=gene-J4731_19965;Name=J4731_19965;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_19965;pseudo=true
JAGETS010000063.1	Protein Homology	CDS	22608	23885	.	-	0	ID=cds-J4731_19965;Parent=gene-J4731_19965;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004243273.1;locus_tag=J4731_19965;product=D-amino acid dehydrogenase;pseudo=true;transl_table=11
JAGETS010000063.1	Genbank	pseudogene	24334	25044	.	-	.	ID=gene-J4731_19970;Name=fadR;gbkey=Gene;gene=fadR;gene_biotype=pseudogene;locus_tag=J4731_19970;pseudo=true
JAGETS010000063.1	Protein Homology	CDS	24334	25044	.	-	0	ID=cds-J4731_19970;Parent=gene-J4731_19970;Note=frameshifted;gbkey=CDS;gene=fadR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211688.1;locus_tag=J4731_19970;product=fatty acid metabolism transcriptional regulator FadR;pseudo=true;transl_table=11
JAGETS010000063.1	Genbank	pseudogene	25336	26803	.	+	.	ID=gene-J4731_19975;Name=nhaB;gbkey=Gene;gene=nhaB;gene_biotype=pseudogene;locus_tag=J4731_19975;pseudo=true
JAGETS010000063.1	Protein Homology	CDS	25336	26803	.	+	0	ID=cds-J4731_19975;Parent=gene-J4731_19975;Note=frameshifted%3B internal stop;gbkey=CDS;gene=nhaB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002386173.1;locus_tag=J4731_19975;product=sodium/proton antiporter NhaB;pseudo=true;transl_table=11
JAGETS010000063.1	Genbank	pseudogene	26954	27471	.	+	.	ID=gene-J4731_19980;Name=dsbB;gbkey=Gene;gene=dsbB;gene_biotype=pseudogene;locus_tag=J4731_19980;pseudo=true
JAGETS010000063.1	Protein Homology	CDS	26954	27471	.	+	0	ID=cds-J4731_19980;Parent=gene-J4731_19980;Note=frameshifted;gbkey=CDS;gene=dsbB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002227934.1;locus_tag=J4731_19980;product=disulfide bond formation protein DsbB;pseudo=true;transl_table=11
JAGETS010000063.1	Genbank	pseudogene	27524	29775	.	-	.	ID=gene-J4731_19985;Name=J4731_19985;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_19985;pseudo=true
JAGETS010000063.1	Protein Homology	CDS	27524	29775	.	-	0	ID=cds-J4731_19985;Parent=gene-J4731_19985;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000726691.1;locus_tag=J4731_19985;product=FdhF/YdeP family oxidoreductase;pseudo=true;transl_table=11
JAGETS010000063.1	Genbank	gene	30052	30174	.	-	.	ID=gene-J4731_19990;Name=J4731_19990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_19990
JAGETS010000063.1	Protein Homology	CDS	30052	30174	.	-	0	ID=cds-MBO1929648.1;Parent=gene-J4731_19990;Dbxref=NCBI_GP:MBO1929648.1;Name=MBO1929648.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004235528.1;locus_tag=J4731_19990;product=hypothetical protein;protein_id=MBO1929648.1;transl_table=11
JAGETS010000063.1	Genbank	pseudogene	30369	30705	.	-	.	ID=gene-J4731_19995;Name=J4731_19995;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_19995;pseudo=true
JAGETS010000063.1	Protein Homology	CDS	30369	30705	.	-	0	ID=cds-J4731_19995;Parent=gene-J4731_19995;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004235527.1;locus_tag=J4731_19995;product=QacE family quaternary ammonium compound efflux SMR transporter;pseudo=true;transl_table=11
JAGETS010000063.1	Genbank	pseudogene	30873	32035	.	-	.	ID=gene-J4731_20000;Name=J4731_20000;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_20000;pseudo=true
JAGETS010000063.1	Protein Homology	CDS	30873	32035	.	-	0	ID=cds-J4731_20000;Parent=gene-J4731_20000;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004235526.1;locus_tag=J4731_20000;product=sugar transporter;pseudo=true;transl_table=11
JAGETS010000063.1	Genbank	pseudogene	32365	32602	.	+	.	ID=gene-J4731_20005;Name=J4731_20005;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_20005;pseudo=true
JAGETS010000063.1	Protein Homology	CDS	32365	32602	.	+	0	ID=cds-J4731_20005;Parent=gene-J4731_20005;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006658775.1;locus_tag=J4731_20005;product=DUF2594 family protein;pseudo=true;transl_table=11
JAGETS010000063.1	Genbank	pseudogene	32792	33068	.	-	.	ID=gene-J4731_20010;Name=J4731_20010;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_20010;pseudo=true
JAGETS010000063.1	Protein Homology	CDS	32792	33068	.	-	0	ID=cds-J4731_20010;Parent=gene-J4731_20010;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004253921.1;locus_tag=J4731_20010;product=hypothetical protein;pseudo=true;transl_table=11
JAGETS010000063.1	Genbank	pseudogene	33268	34583	.	-	.	ID=gene-J4731_20015;Name=J4731_20015;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_20015;pseudo=true
JAGETS010000063.1	Protein Homology	CDS	33268	34583	.	-	0	ID=cds-J4731_20015;Parent=gene-J4731_20015;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012988416.1;locus_tag=J4731_20015;product=sodium:alanine symporter family protein;pseudo=true;transl_table=11
JAGETS010000063.1	Genbank	pseudogene	34983	35859	.	-	.	ID=gene-J4731_20020;Name=htpX;gbkey=Gene;gene=htpX;gene_biotype=pseudogene;locus_tag=J4731_20020;pseudo=true
JAGETS010000063.1	Protein Homology	CDS	34983	35859	.	-	0	ID=cds-J4731_20020;Parent=gene-J4731_20020;Note=frameshifted;gbkey=CDS;gene=htpX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014229823.1;locus_tag=J4731_20020;product=protease HtpX;pseudo=true;transl_table=11
JAGETS010000063.1	Genbank	pseudogene	36223	36920	.	-	.	ID=gene-J4731_20025;Name=J4731_20025;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_20025;pseudo=true
JAGETS010000063.1	Protein Homology	CDS	36223	36920	.	-	0	ID=cds-J4731_20025;Parent=gene-J4731_20025;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006815281.1;locus_tag=J4731_20025;product=cell envelope biogenesis protein TolA;pseudo=true;transl_table=11
JAGETS010000063.1	Genbank	pseudogene	37206	39236	.	-	.	ID=gene-J4731_20030;Name=prc;gbkey=Gene;gene=prc;gene_biotype=pseudogene;locus_tag=J4731_20030;pseudo=true
JAGETS010000063.1	Protein Homology	CDS	37206	39236	.	-	0	ID=cds-J4731_20030;Parent=gene-J4731_20030;Note=frameshifted;gbkey=CDS;gene=prc;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008910985.1;locus_tag=J4731_20030;product=carboxy terminal-processing peptidase;pseudo=true;transl_table=11
JAGETS010000063.1	Genbank	pseudogene	39256	39939	.	-	.	ID=gene-J4731_20035;Name=proQ;gbkey=Gene;gene=proQ;gene_biotype=pseudogene;locus_tag=J4731_20035;pseudo=true
JAGETS010000063.1	Protein Homology	CDS	39256	39939	.	-	0	ID=cds-J4731_20035;Parent=gene-J4731_20035;Note=frameshifted%3B internal stop;gbkey=CDS;gene=proQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004242572.1;locus_tag=J4731_20035;product=RNA chaperone ProQ;pseudo=true;transl_table=11
JAGETS010000063.1	Genbank	pseudogene	40044	40524	.	-	.	ID=gene-J4731_20040;Name=J4731_20040;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_20040;pseudo=true
JAGETS010000063.1	Protein Homology	CDS	40044	40524	.	-	0	ID=cds-J4731_20040;Parent=gene-J4731_20040;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006815284.1;locus_tag=J4731_20040;product=GAF domain-containing protein;pseudo=true;transl_table=11
JAGETS010000063.1	Genbank	pseudogene	40833	41870	.	+	.	ID=gene-J4731_20045;Name=J4731_20045;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_20045;pseudo=true
JAGETS010000063.1	Protein Homology	CDS	40833	41870	.	+	0	ID=cds-J4731_20045;Parent=gene-J4731_20045;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002367629.1;locus_tag=J4731_20045;product=paraquat-inducible protein A;pseudo=true;transl_table=11
JAGETS010000063.1	Genbank	pseudogene	41845	44175	.	+	.	ID=gene-J4731_20050;Name=J4731_20050;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_20050;pseudo=true
JAGETS010000063.1	Protein Homology	CDS	41845	44175	.	+	0	ID=cds-J4731_20050;Parent=gene-J4731_20050;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017892611.1;locus_tag=J4731_20050;product=MCE family protein;pseudo=true;transl_table=11
JAGETS010000063.1	Genbank	pseudogene	44322	44554	.	+	.	ID=gene-J4731_20055;Name=J4731_20055;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_20055;pseudo=true
JAGETS010000063.1	Protein Homology	CDS	44322	44554	.	+	0	ID=cds-J4731_20055;Parent=gene-J4731_20055;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006658787.1;locus_tag=J4731_20055;product=DUF1480 family protein;pseudo=true;transl_table=11
JAGETS010000063.1	Genbank	pseudogene	44973	45316	.	-	.	ID=gene-J4731_20060;Name=J4731_20060;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_20060;pseudo=true
JAGETS010000063.1	Protein Homology	CDS	44973	45316	.	-	0	ID=cds-J4731_20060;Parent=gene-J4731_20060;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004253900.1;locus_tag=J4731_20060;product=YebY family protein;pseudo=true;transl_table=11
JAGETS010000063.1	Genbank	pseudogene	45381	46265	.	-	.	ID=gene-J4731_20065;Name=copD;gbkey=Gene;gene=copD;gene_biotype=pseudogene;locus_tag=J4731_20065;pseudo=true
JAGETS010000063.1	Protein Homology	CDS	45381	46265	.	-	0	ID=cds-J4731_20065;Parent=gene-J4731_20065;Note=frameshifted;gbkey=CDS;gene=copD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004251471.1;locus_tag=J4731_20065;product=copper homeostasis membrane protein CopD;pseudo=true;transl_table=11
JAGETS010000063.1	Genbank	pseudogene	46267	46651	.	-	.	ID=gene-J4731_20070;Name=copC;gbkey=Gene;gene=copC;gene_biotype=pseudogene;locus_tag=J4731_20070;pseudo=true
JAGETS010000063.1	Protein Homology	CDS	46267	46651	.	-	0	ID=cds-J4731_20070;Parent=gene-J4731_20070;Note=frameshifted;gbkey=CDS;gene=copC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004713112.1;locus_tag=J4731_20070;product=copper homeostasis periplasmic binding protein CopC;pseudo=true;transl_table=11
JAGETS010000063.1	Genbank	pseudogene	46889	47307	.	-	.	ID=gene-J4731_20075;Name=ftnA;gbkey=Gene;gene=ftnA;gene_biotype=pseudogene;locus_tag=J4731_20075;pseudo=true
JAGETS010000063.1	Protein Homology	CDS	46889	47307	.	-	0	ID=cds-J4731_20075;Parent=gene-J4731_20075;Note=frameshifted;gbkey=CDS;gene=ftnA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013510481.1;locus_tag=J4731_20075;product=non-heme ferritin;pseudo=true;transl_table=11
JAGETS010000063.1	Genbank	gene	47668	47898	.	+	.	ID=gene-J4731_20080;Name=J4731_20080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_20080
JAGETS010000063.1	Protein Homology	CDS	47668	47898	.	+	0	ID=cds-MBO1929649.1;Parent=gene-J4731_20080;Dbxref=NCBI_GP:MBO1929649.1;Name=MBO1929649.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000916763.1;locus_tag=J4731_20080;product=DNA polymerase III subunit theta;protein_id=MBO1929649.1;transl_table=11
JAGETS010000063.1	Genbank	pseudogene	47972	48339	.	-	.	ID=gene-J4731_20085;Name=J4731_20085;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_20085;pseudo=true
JAGETS010000063.1	Protein Homology	CDS	47972	48339	.	-	0	ID=cds-J4731_20085;Parent=gene-J4731_20085;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004253880.1;locus_tag=J4731_20085;product=hypothetical protein;pseudo=true;transl_table=11
JAGETS010000063.1	Genbank	gene	48514	48693	.	-	.	ID=gene-J4731_20090;Name=J4731_20090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_20090
JAGETS010000063.1	Protein Homology	CDS	48514	48693	.	-	0	ID=cds-MBO1929650.1;Parent=gene-J4731_20090;Dbxref=NCBI_GP:MBO1929650.1;Name=MBO1929650.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004253877.1;locus_tag=J4731_20090;product=YoaH family protein;protein_id=MBO1929650.1;transl_table=11
JAGETS010000063.1	Genbank	pseudogene	48900	50369	.	+	.	ID=gene-J4731_20095;Name=pabB;gbkey=Gene;gene=pabB;gene_biotype=pseudogene;locus_tag=J4731_20095;pseudo=true
JAGETS010000063.1	Protein Homology	CDS	48900	50369	.	+	0	ID=cds-J4731_20095;Parent=gene-J4731_20095;Note=frameshifted;gbkey=CDS;gene=pabB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005183033.1;locus_tag=J4731_20095;product=aminodeoxychorismate synthase component 1;pseudo=true;transl_table=11
JAGETS010000063.1	Genbank	gene	50469	50675	.	+	.	ID=gene-J4731_20100;Name=J4731_20100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_20100
JAGETS010000063.1	GeneMarkS-2+	CDS	50469	50675	.	+	0	ID=cds-MBO1929651.1;Parent=gene-J4731_20100;Dbxref=NCBI_GP:MBO1929651.1;Name=MBO1929651.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_20100;product=hypothetical protein;protein_id=MBO1929651.1;transl_table=11
JAGETS010000063.1	Genbank	pseudogene	51006	52357	.	+	.	ID=gene-J4731_20105;Name=J4731_20105;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_20105;pseudo=true
JAGETS010000063.1	Protein Homology	CDS	51006	52357	.	+	0	ID=cds-J4731_20105;Parent=gene-J4731_20105;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227643.1;locus_tag=J4731_20105;product=L-serine ammonia-lyase;pseudo=true;transl_table=11
JAGETS010000063.1	Genbank	pseudogene	53100	53989	.	+	.	ID=gene-J4731_20110;Name=manX;gbkey=Gene;gene=manX;gene_biotype=pseudogene;locus_tag=J4731_20110;pseudo=true
JAGETS010000063.1	Protein Homology	CDS	53100	53989	.	+	0	ID=cds-J4731_20110;Parent=gene-J4731_20110;Note=frameshifted;gbkey=CDS;gene=manX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019452842.1;locus_tag=J4731_20110;product=PTS mannose transporter subunit IIAB;pseudo=true;transl_table=11
JAGETS010000063.1	Genbank	pseudogene	54068	54865	.	+	.	ID=gene-J4731_20115;Name=J4731_20115;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_20115;pseudo=true
JAGETS010000063.1	Protein Homology	CDS	54068	54865	.	+	0	ID=cds-J4731_20115;Parent=gene-J4731_20115;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002910918.1;locus_tag=J4731_20115;product=PTS mannose/fructose/sorbose transporter subunit IIC;pseudo=true;transl_table=11
JAGETS010000063.1	Genbank	pseudogene	54885	55726	.	+	.	ID=gene-J4731_20120;Name=J4731_20120;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_20120;pseudo=true
JAGETS010000063.1	Protein Homology	CDS	54885	55726	.	+	0	ID=cds-J4731_20120;Parent=gene-J4731_20120;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007888035.1;locus_tag=J4731_20120;product=PTS mannose transporter subunit IID;pseudo=true;transl_table=11
JAGETS010000063.1	Genbank	pseudogene	55813	56202	.	+	.	ID=gene-J4731_20125;Name=J4731_20125;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_20125;pseudo=true
JAGETS010000063.1	Protein Homology	CDS	55813	56202	.	+	0	ID=cds-J4731_20125;Parent=gene-J4731_20125;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006661629.1;locus_tag=J4731_20125;product=DUF986 family protein;pseudo=true;transl_table=11
JAGETS010000063.1	Genbank	pseudogene	56599	57171	.	+	.	ID=gene-J4731_20130;Name=J4731_20130;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_20130;pseudo=true
JAGETS010000063.1	Protein Homology	CDS	56599	57171	.	+	0	ID=cds-J4731_20130;Parent=gene-J4731_20130;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004248311.1;locus_tag=J4731_20130;product=manganese efflux pump;pseudo=true;transl_table=11
JAGETS010000063.1	Genbank	pseudogene	57231	58018	.	-	.	ID=gene-J4731_20135;Name=rlmA;gbkey=Gene;gene=rlmA;gene_biotype=pseudogene;locus_tag=J4731_20135;pseudo=true
JAGETS010000063.1	Protein Homology	CDS	57231	58018	.	-	0	ID=cds-J4731_20135;Parent=gene-J4731_20135;Note=frameshifted%3B internal stop;gbkey=CDS;gene=rlmA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006658804.1;locus_tag=J4731_20135;product=23S rRNA (guanine(745)-N(1))-methyltransferase;pseudo=true;transl_table=11
JAGETS010000063.1	Genbank	pseudogene	58151	58612	.	+	.	ID=gene-J4731_20140;Name=J4731_20140;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_20140;pseudo=true
JAGETS010000063.1	Protein Homology	CDS	58151	58612	.	+	0	ID=cds-J4731_20140;Parent=gene-J4731_20140;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004151170.1;locus_tag=J4731_20140;product=GNAT family N-acetyltransferase;pseudo=true;transl_table=11
JAGETS010000063.1	Genbank	pseudogene	58765	59442	.	-	.	ID=gene-J4731_20145;Name=J4731_20145;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_20145;pseudo=true
JAGETS010000063.1	Protein Homology	CDS	58765	59442	.	-	0	ID=cds-J4731_20145;Parent=gene-J4731_20145;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000283667.1;locus_tag=J4731_20145;product=phosphatase;pseudo=true;transl_table=11
JAGETS010000063.1	Genbank	pseudogene	59648	60869	.	-	.	ID=gene-J4731_20150;Name=J4731_20150;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_20150;pseudo=true
JAGETS010000063.1	Protein Homology	CDS	59648	60869	.	-	0	ID=cds-J4731_20150;Parent=gene-J4731_20150;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210868.1;locus_tag=J4731_20150;product=alanine racemase;pseudo=true;transl_table=11
JAGETS010000063.1	Genbank	pseudogene	61245	62333	.	+	.	ID=gene-J4731_20155;Name=J4731_20155;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_20155;pseudo=true
JAGETS010000063.1	Protein Homology	CDS	61245	62333	.	+	0	ID=cds-J4731_20155;Parent=gene-J4731_20155;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_119863615.1;locus_tag=J4731_20155;product=porin;pseudo=true;transl_table=11
JAGETS010000063.1	Genbank	pseudogene	62680	63602	.	-	.	ID=gene-J4731_20160;Name=J4731_20160;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_20160;pseudo=true
JAGETS010000063.1	Protein Homology	CDS	62680	63602	.	-	0	ID=cds-J4731_20160;Parent=gene-J4731_20160;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008925369.1;locus_tag=J4731_20160;product=aldo/keto reductase;pseudo=true;transl_table=11
JAGETS010000063.1	Genbank	pseudogene	64885	65319	.	+	.	ID=gene-J4731_20165;Name=J4731_20165;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_20165;pseudo=true
JAGETS010000063.1	Protein Homology	CDS	64885	65319	.	+	0	ID=cds-J4731_20165;Parent=gene-J4731_20165;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003843523.1;locus_tag=J4731_20165;product=glutathione peroxidase;pseudo=true;transl_table=11
##sequence-region JAGETS010000064.1 1 59777
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=587
JAGETS010000064.1	Genbank	region	1	59777	.	+	.	ID=JAGETS010000064.1:1..59777;Dbxref=taxon:587;collected-by=NHLS;collection-date=2018;country=South Africa: Pretoria;gbkey=Src;isolation-source=stool;lat-lon=25.7479 S 28.2293 E;mol_type=genomic DNA;nat-host=porcine;strain=SG003
JAGETS010000064.1	Genbank	pseudogene	119	454	.	+	.	ID=gene-J4731_20170;Name=J4731_20170;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_20170;pseudo=true
JAGETS010000064.1	Protein Homology	CDS	119	454	.	+	0	ID=cds-J4731_20170;Parent=gene-J4731_20170;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024322.1;locus_tag=J4731_20170;product=hypothetical protein;pseudo=true;transl_table=11
JAGETS010000064.1	Genbank	pseudogene	459	719	.	+	.	ID=gene-J4731_20175;Name=J4731_20175;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_20175;pseudo=true
JAGETS010000064.1	Protein Homology	CDS	459	719	.	+	0	ID=cds-J4731_20175;Parent=gene-J4731_20175;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024322.1;locus_tag=J4731_20175;product=hypothetical protein;pseudo=true;transl_table=11
JAGETS010000064.1	Genbank	gene	1131	1232	.	+	.	ID=gene-J4731_20180;Name=J4731_20180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_20180
JAGETS010000064.1	Protein Homology	CDS	1131	1232	.	+	0	ID=cds-MBO1929652.1;Parent=gene-J4731_20180;Dbxref=NCBI_GP:MBO1929652.1;Name=MBO1929652.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024322.1;locus_tag=J4731_20180;product=hypothetical protein;protein_id=MBO1929652.1;transl_table=11
JAGETS010000064.1	Genbank	gene	1259	1681	.	+	.	ID=gene-J4731_20185;Name=J4731_20185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_20185
JAGETS010000064.1	Protein Homology	CDS	1259	1681	.	+	0	ID=cds-MBO1929653.1;Parent=gene-J4731_20185;Dbxref=NCBI_GP:MBO1929653.1;Name=MBO1929653.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024322.1;locus_tag=J4731_20185;product=hypothetical protein;protein_id=MBO1929653.1;transl_table=11
JAGETS010000064.1	Genbank	gene	1784	2089	.	+	.	ID=gene-J4731_20190;Name=J4731_20190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_20190
JAGETS010000064.1	GeneMarkS-2+	CDS	1784	2089	.	+	0	ID=cds-MBO1929654.1;Parent=gene-J4731_20190;Dbxref=NCBI_GP:MBO1929654.1;Name=MBO1929654.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_20190;product=hypothetical protein;protein_id=MBO1929654.1;transl_table=11
JAGETS010000064.1	Genbank	gene	2651	2932	.	+	.	ID=gene-J4731_20195;Name=J4731_20195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_20195
JAGETS010000064.1	GeneMarkS-2+	CDS	2651	2932	.	+	0	ID=cds-MBO1929655.1;Parent=gene-J4731_20195;Dbxref=NCBI_GP:MBO1929655.1;Name=MBO1929655.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_20195;product=hypothetical protein;protein_id=MBO1929655.1;transl_table=11
JAGETS010000064.1	Genbank	pseudogene	3791	6935	.	-	.	ID=gene-J4731_20200;Name=J4731_20200;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_20200;pseudo=true
JAGETS010000064.1	Protein Homology	CDS	3791	6935	.	-	0	ID=cds-J4731_20200;Parent=gene-J4731_20200;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_116919955.1;locus_tag=J4731_20200;product=efflux RND transporter permease subunit;pseudo=true;transl_table=11
JAGETS010000064.1	Genbank	pseudogene	7007	8198	.	-	.	ID=gene-J4731_20205;Name=J4731_20205;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_20205;pseudo=true
JAGETS010000064.1	Protein Homology	CDS	7007	8198	.	-	0	ID=cds-J4731_20205;Parent=gene-J4731_20205;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005158151.1;locus_tag=J4731_20205;product=efflux RND transporter periplasmic adaptor subunit;pseudo=true;transl_table=11
JAGETS010000064.1	Genbank	pseudogene	8320	8966	.	+	.	ID=gene-J4731_20210;Name=J4731_20210;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_20210;pseudo=true
JAGETS010000064.1	Protein Homology	CDS	8320	8966	.	+	0	ID=cds-J4731_20210;Parent=gene-J4731_20210;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006659298.1;locus_tag=J4731_20210;product=TetR family transcriptional regulator;pseudo=true;transl_table=11
JAGETS010000064.1	Genbank	pseudogene	8979	9331	.	+	.	ID=gene-J4731_20215;Name=J4731_20215;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_20215;pseudo=true
JAGETS010000064.1	Protein Homology	CDS	8979	9331	.	+	0	ID=cds-J4731_20215;Parent=gene-J4731_20215;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309751.1;locus_tag=J4731_20215;product=DsrE/DsrF/TusD sulfur relay family protein;pseudo=true;transl_table=11
JAGETS010000064.1	Genbank	pseudogene	9655	12789	.	+	.	ID=gene-J4731_20220;Name=mscK;gbkey=Gene;gene=mscK;gene_biotype=pseudogene;locus_tag=J4731_20220;pseudo=true
JAGETS010000064.1	Protein Homology	CDS	9655	12789	.	+	0	ID=cds-J4731_20220;Parent=gene-J4731_20220;Note=frameshifted;gbkey=CDS;gene=mscK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004922451.1;locus_tag=J4731_20220;product=mechanosensitive channel MscK;pseudo=true;transl_table=11
JAGETS010000064.1	Genbank	gene	12795	12971	.	-	.	ID=gene-J4731_20225;Name=J4731_20225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_20225
JAGETS010000064.1	Protein Homology	CDS	12795	12971	.	-	0	ID=cds-MBO1929656.1;Parent=gene-J4731_20225;Dbxref=NCBI_GP:MBO1929656.1;Name=MBO1929656.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004260415.1;locus_tag=J4731_20225;product=DUF2496 domain-containing protein;protein_id=MBO1929656.1;transl_table=11
JAGETS010000064.1	Genbank	pseudogene	12990	13494	.	-	.	ID=gene-J4731_20230;Name=J4731_20230;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_20230;pseudo=true
JAGETS010000064.1	Protein Homology	CDS	12990	13494	.	-	0	ID=cds-J4731_20230;Parent=gene-J4731_20230;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006661073.1;locus_tag=J4731_20230;product=primosomal replication protein;pseudo=true;transl_table=11
JAGETS010000064.1	Genbank	pseudogene	13673	14222	.	+	.	ID=gene-J4731_20235;Name=apt;gbkey=Gene;gene=apt;gene_biotype=pseudogene;locus_tag=J4731_20235;pseudo=true
JAGETS010000064.1	Protein Homology	CDS	13673	14222	.	+	0	ID=cds-J4731_20235;Parent=gene-J4731_20235;Note=frameshifted;gbkey=CDS;gene=apt;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006815133.1;locus_tag=J4731_20235;product=adenine phosphoribosyltransferase;pseudo=true;transl_table=11
JAGETS010000064.1	Genbank	pseudogene	14335	16309	.	+	.	ID=gene-J4731_20240;Name=dnaX;gbkey=Gene;gene=dnaX;gene_biotype=pseudogene;locus_tag=J4731_20240;pseudo=true
JAGETS010000064.1	Protein Homology	CDS	14335	16309	.	+	0	ID=cds-J4731_20240;Parent=gene-J4731_20240;Note=frameshifted;gbkey=CDS;gene=dnaX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006815132.1;locus_tag=J4731_20240;product=DNA polymerase III subunit gamma/tau;pseudo=true;transl_table=11
JAGETS010000064.1	Genbank	pseudogene	16312	16640	.	+	.	ID=gene-J4731_20245;Name=J4731_20245;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_20245;pseudo=true
JAGETS010000064.1	Protein Homology	CDS	16312	16640	.	+	0	ID=cds-J4731_20245;Parent=gene-J4731_20245;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001364632.1;locus_tag=J4731_20245;product=YbaB/EbfC family nucleoid-associated protein;pseudo=true;transl_table=11
JAGETS010000064.1	Genbank	pseudogene	16640	17164	.	+	.	ID=gene-J4731_20250;Name=recR;gbkey=Gene;gene=recR;gene_biotype=pseudogene;locus_tag=J4731_20250;pseudo=true
JAGETS010000064.1	Protein Homology	CDS	16640	17164	.	+	0	ID=cds-J4731_20250;Parent=gene-J4731_20250;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;gene=recR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308552.1;locus_tag=J4731_20250;product=recombination protein RecR;pseudo=true;transl_table=11
JAGETS010000064.1	Genbank	pseudogene	17588	19423	.	+	.	ID=gene-J4731_20255;Name=htpG;gbkey=Gene;gene=htpG;gene_biotype=pseudogene;locus_tag=J4731_20255;pseudo=true
JAGETS010000064.1	Protein Homology	CDS	17588	19423	.	+	0	ID=cds-J4731_20255;Parent=gene-J4731_20255;Note=frameshifted%3B internal stop;gbkey=CDS;gene=htpG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006661076.1;locus_tag=J4731_20255;product=molecular chaperone HtpG;pseudo=true;transl_table=11
JAGETS010000064.1	Genbank	pseudogene	19651	20225	.	+	.	ID=gene-J4731_20260;Name=adk;gbkey=Gene;gene=adk;gene_biotype=pseudogene;locus_tag=J4731_20260;pseudo=true
JAGETS010000064.1	Protein Homology	CDS	19651	20225	.	+	0	ID=cds-J4731_20260;Parent=gene-J4731_20260;Note=frameshifted;gbkey=CDS;gene=adk;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007706188.1;locus_tag=J4731_20260;product=adenylate kinase;pseudo=true;transl_table=11
JAGETS010000064.1	Genbank	pseudogene	20359	21365	.	+	.	ID=gene-J4731_20265;Name=hemH;gbkey=Gene;gene=hemH;gene_biotype=pseudogene;locus_tag=J4731_20265;pseudo=true
JAGETS010000064.1	Protein Homology	CDS	20359	21365	.	+	0	ID=cds-J4731_20265;Parent=gene-J4731_20265;Note=frameshifted;gbkey=CDS;gene=hemH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015835501.1;locus_tag=J4731_20265;product=ferrochelatase;pseudo=true;transl_table=11
JAGETS010000064.1	Genbank	pseudogene	21488	22600	.	+	.	ID=gene-J4731_20270;Name=fepE;gbkey=Gene;gene=fepE;gene_biotype=pseudogene;locus_tag=J4731_20270;pseudo=true
JAGETS010000064.1	Protein Homology	CDS	21488	22600	.	+	0	ID=cds-J4731_20270;Parent=gene-J4731_20270;Note=frameshifted;gbkey=CDS;gene=fepE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006815127.1;locus_tag=J4731_20270;product=LPS O-antigen length regulator;pseudo=true;transl_table=11
JAGETS010000064.1	Genbank	pseudogene	22710	24009	.	+	.	ID=gene-J4731_20275;Name=J4731_20275;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_20275;pseudo=true
JAGETS010000064.1	Protein Homology	CDS	22710	24009	.	+	0	ID=cds-J4731_20275;Parent=gene-J4731_20275;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308557.1;locus_tag=J4731_20275;product=inosine/guanosine kinase;pseudo=true;transl_table=11
JAGETS010000064.1	Genbank	gene	24348	25598	.	-	.	ID=gene-J4731_20280;Name=eutH;gbkey=Gene;gene=eutH;gene_biotype=protein_coding;locus_tag=J4731_20280
JAGETS010000064.1	Protein Homology	CDS	24348	25598	.	-	0	ID=cds-MBO1929657.1;Parent=gene-J4731_20280;Dbxref=NCBI_GP:MBO1929657.1;Name=MBO1929657.1;gbkey=CDS;gene=eutH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006815125.1;locus_tag=J4731_20280;product=ethanolamine utilization protein EutH;protein_id=MBO1929657.1;transl_table=11
JAGETS010000064.1	Genbank	pseudogene	25622	27042	.	-	.	ID=gene-J4731_20285;Name=J4731_20285;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_20285;pseudo=true
JAGETS010000064.1	Protein Homology	CDS	25622	27042	.	-	0	ID=cds-J4731_20285;Parent=gene-J4731_20285;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006659283.1;locus_tag=J4731_20285;product=glycerol kinase;pseudo=true;transl_table=11
JAGETS010000064.1	Genbank	pseudogene	27279	28669	.	+	.	ID=gene-J4731_20290;Name=J4731_20290;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_20290;pseudo=true
JAGETS010000064.1	Protein Homology	CDS	27279	28669	.	+	0	ID=cds-J4731_20290;Parent=gene-J4731_20290;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004260367.1;locus_tag=J4731_20290;product=NAD(P)/FAD-dependent oxidoreductase;pseudo=true;transl_table=11
JAGETS010000064.1	Genbank	pseudogene	28666	29889	.	+	.	ID=gene-J4731_20295;Name=J4731_20295;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_20295;pseudo=true
JAGETS010000064.1	Protein Homology	CDS	28666	29889	.	+	0	ID=cds-J4731_20295;Parent=gene-J4731_20295;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006659281.1;locus_tag=J4731_20295;product=FAD-dependent oxidoreductase;pseudo=true;transl_table=11
JAGETS010000064.1	Genbank	pseudogene	29968	30683	.	+	.	ID=gene-J4731_20300;Name=J4731_20300;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_20300;pseudo=true
JAGETS010000064.1	Protein Homology	CDS	29968	30683	.	+	0	ID=cds-J4731_20300;Parent=gene-J4731_20300;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006815121.1;locus_tag=J4731_20300;product=DeoR/GlpR transcriptional regulator;pseudo=true;transl_table=11
JAGETS010000064.1	Genbank	pseudogene	30793	31141	.	+	.	ID=gene-J4731_20305;Name=J4731_20305;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_20305;pseudo=true
JAGETS010000064.1	Protein Homology	CDS	30793	31141	.	+	0	ID=cds-J4731_20305;Parent=gene-J4731_20305;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006815120.1;locus_tag=J4731_20305;product=DUF1937 family protein;pseudo=true;transl_table=11
JAGETS010000064.1	Genbank	pseudogene	31348	32917	.	-	.	ID=gene-J4731_20310;Name=J4731_20310;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_20310;pseudo=true
JAGETS010000064.1	Protein Homology	CDS	31348	32917	.	-	0	ID=cds-J4731_20310;Parent=gene-J4731_20310;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004390658.1;locus_tag=J4731_20310;product=Kef family K(+) transporter;pseudo=true;transl_table=11
JAGETS010000064.1	Genbank	pseudogene	33200	34375	.	-	.	ID=gene-J4731_20315;Name=J4731_20315;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_20315;pseudo=true
JAGETS010000064.1	Protein Homology	CDS	33200	34375	.	-	0	ID=cds-J4731_20315;Parent=gene-J4731_20315;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001251608.1;locus_tag=J4731_20315;product=MFS transporter;pseudo=true;transl_table=11
JAGETS010000064.1	Genbank	pseudogene	34710	36321	.	+	.	ID=gene-J4731_20320;Name=J4731_20320;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_20320;pseudo=true
JAGETS010000064.1	Protein Homology	CDS	34710	36321	.	+	0	ID=cds-J4731_20320;Parent=gene-J4731_20320;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012968807.1;locus_tag=J4731_20320;product=bifunctional UDP-sugar hydrolase/5'-nucleotidase;pseudo=true;transl_table=11
JAGETS010000064.1	Genbank	pseudogene	36666	37129	.	-	.	ID=gene-J4731_20325;Name=ybaK;gbkey=Gene;gene=ybaK;gene_biotype=pseudogene;locus_tag=J4731_20325;pseudo=true
JAGETS010000064.1	Protein Homology	CDS	36666	37129	.	-	0	ID=cds-J4731_20325;Parent=gene-J4731_20325;Note=frameshifted;gbkey=CDS;gene=ybaK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004248647.1;locus_tag=J4731_20325;product=Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK;pseudo=true;transl_table=11
JAGETS010000064.1	Genbank	pseudogene	37151	37812	.	-	.	ID=gene-J4731_20330;Name=J4731_20330;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_20330;pseudo=true
JAGETS010000064.1	Protein Homology	CDS	37151	37812	.	-	0	ID=cds-J4731_20330;Parent=gene-J4731_20330;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208580.1;locus_tag=J4731_20330;product=TraB/GumN family protein;pseudo=true;transl_table=11
JAGETS010000064.1	Genbank	pseudogene	38081	38658	.	-	.	ID=gene-J4731_20335;Name=J4731_20335;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_20335;pseudo=true
JAGETS010000064.1	Protein Homology	CDS	38081	38658	.	-	0	ID=cds-J4731_20335;Parent=gene-J4731_20335;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004260329.1;locus_tag=J4731_20335;product=HdeD family acid-resistance protein;pseudo=true;transl_table=11
JAGETS010000064.1	Genbank	pseudogene	38818	41318	.	-	.	ID=gene-J4731_20340;Name=copA;gbkey=Gene;gene=copA;gene_biotype=pseudogene;locus_tag=J4731_20340;pseudo=true
JAGETS010000064.1	Protein Homology	CDS	38818	41318	.	-	0	ID=cds-J4731_20340;Parent=gene-J4731_20340;Note=frameshifted;gbkey=CDS;gene=copA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017371476.1;locus_tag=J4731_20340;product=copper-exporting P-type ATPase CopA;pseudo=true;transl_table=11
JAGETS010000064.1	Genbank	gene	41473	41610	.	-	.	ID=gene-J4731_20345;Name=J4731_20345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_20345
JAGETS010000064.1	GeneMarkS-2+	CDS	41473	41610	.	-	0	ID=cds-MBO1929658.1;Parent=gene-J4731_20345;Dbxref=NCBI_GP:MBO1929658.1;Name=MBO1929658.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_20345;product=hypothetical protein;protein_id=MBO1929658.1;transl_table=11
JAGETS010000064.1	Genbank	gene	41603	41752	.	-	.	ID=gene-J4731_20350;Name=J4731_20350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_20350
JAGETS010000064.1	GeneMarkS-2+	CDS	41603	41752	.	-	0	ID=cds-MBO1929659.1;Parent=gene-J4731_20350;Dbxref=NCBI_GP:MBO1929659.1;Name=MBO1929659.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_20350;product=hypothetical protein;protein_id=MBO1929659.1;transl_table=11
JAGETS010000064.1	Genbank	pseudogene	41871	42277	.	+	.	ID=gene-J4731_20355;Name=cueR;gbkey=Gene;gene=cueR;gene_biotype=pseudogene;locus_tag=J4731_20355;pseudo=true
JAGETS010000064.1	Protein Homology	CDS	41871	42277	.	+	0	ID=cds-J4731_20355;Parent=gene-J4731_20355;Note=frameshifted;gbkey=CDS;gene=cueR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006659271.1;locus_tag=J4731_20355;product=Cu(I)-responsive transcriptional regulator;pseudo=true;transl_table=11
JAGETS010000064.1	Genbank	pseudogene	42231	42707	.	-	.	ID=gene-J4731_20360;Name=J4731_20360;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_20360;pseudo=true
JAGETS010000064.1	Protein Homology	CDS	42231	42707	.	-	0	ID=cds-J4731_20360;Parent=gene-J4731_20360;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006659270.1;locus_tag=J4731_20360;product=NfeD family protein;pseudo=true;transl_table=11
JAGETS010000064.1	Genbank	pseudogene	42704	43644	.	-	.	ID=gene-J4731_20365;Name=J4731_20365;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_20365;pseudo=true
JAGETS010000064.1	Protein Homology	CDS	42704	43644	.	-	0	ID=cds-J4731_20365;Parent=gene-J4731_20365;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006659269.1;locus_tag=J4731_20365;product=SPFH/Band 7/PHB domain protein;pseudo=true;transl_table=11
JAGETS010000064.1	Genbank	pseudogene	43658	44512	.	-	.	ID=gene-J4731_20370;Name=J4731_20370;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_20370;pseudo=true
JAGETS010000064.1	Protein Homology	CDS	43658	44512	.	-	0	ID=cds-J4731_20370;Parent=gene-J4731_20370;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017627896.1;locus_tag=J4731_20370;product=co-chaperone YbbN;pseudo=true;transl_table=11
JAGETS010000064.1	Genbank	pseudogene	44502	45376	.	-	.	ID=gene-J4731_20375;Name=J4731_20375;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_20375;pseudo=true
JAGETS010000064.1	Protein Homology	CDS	44502	45376	.	-	0	ID=cds-J4731_20375;Parent=gene-J4731_20375;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014656540.1;locus_tag=J4731_20375;product=SDR family oxidoreductase;pseudo=true;transl_table=11
JAGETS010000064.1	Genbank	gene	45463	46104	.	-	.	ID=gene-J4731_20380;Name=tesA;gbkey=Gene;gene=tesA;gene_biotype=protein_coding;locus_tag=J4731_20380
JAGETS010000064.1	Protein Homology	CDS	45463	46104	.	-	0	ID=cds-MBO1929660.1;Parent=gene-J4731_20380;Dbxref=NCBI_GP:MBO1929660.1;Name=MBO1929660.1;gbkey=CDS;gene=tesA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008910211.1;locus_tag=J4731_20380;product=multifunctional acyl-CoA thioesterase I/protease I/lysophospholipase L1;protein_id=MBO1929660.1;transl_table=11
JAGETS010000064.1	Genbank	pseudogene	46072	46774	.	+	.	ID=gene-J4731_20385;Name=J4731_20385;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_20385;pseudo=true
JAGETS010000064.1	Protein Homology	CDS	46072	46774	.	+	0	ID=cds-J4731_20385;Parent=gene-J4731_20385;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225521.1;locus_tag=J4731_20385;product=ABC transporter ATP-binding protein;pseudo=true;transl_table=11
JAGETS010000064.1	Genbank	pseudogene	46749	49180	.	+	.	ID=gene-J4731_20390;Name=J4731_20390;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_20390;pseudo=true
JAGETS010000064.1	Protein Homology	CDS	46749	49180	.	+	0	ID=cds-J4731_20390;Parent=gene-J4731_20390;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014069188.1;locus_tag=J4731_20390;product=ABC transporter permease;pseudo=true;transl_table=11
JAGETS010000064.1	Genbank	pseudogene	49431	50790	.	+	.	ID=gene-J4731_20395;Name=J4731_20395;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_20395;pseudo=true
JAGETS010000064.1	Protein Homology	CDS	49431	50790	.	+	0	ID=cds-J4731_20395;Parent=gene-J4731_20395;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004260278.1;locus_tag=J4731_20395;product=esterase-like activity of phytase family protein;pseudo=true;transl_table=11
JAGETS010000064.1	Genbank	pseudogene	50912	52133	.	-	.	ID=gene-J4731_20400;Name=J4731_20400;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_20400;pseudo=true
JAGETS010000064.1	Protein Homology	CDS	50912	52133	.	-	0	ID=cds-J4731_20400;Parent=gene-J4731_20400;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004260274.1;locus_tag=J4731_20400;product=MFS transporter;pseudo=true;transl_table=11
JAGETS010000064.1	Genbank	pseudogene	52243	53314	.	-	.	ID=gene-J4731_20405;Name=purK;gbkey=Gene;gene=purK;gene_biotype=pseudogene;locus_tag=J4731_20405;pseudo=true
JAGETS010000064.1	Protein Homology	CDS	52243	53314	.	-	0	ID=cds-J4731_20405;Parent=gene-J4731_20405;Note=frameshifted;gbkey=CDS;gene=purK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006661095.1;locus_tag=J4731_20405;product=5-(carboxyamino)imidazole ribonucleotide synthase;pseudo=true;transl_table=11
JAGETS010000064.1	Genbank	pseudogene	53314	53820	.	-	.	ID=gene-J4731_20410;Name=purE;gbkey=Gene;gene=purE;gene_biotype=pseudogene;locus_tag=J4731_20410;pseudo=true
JAGETS010000064.1	Protein Homology	CDS	53314	53820	.	-	0	ID=cds-J4731_20410;Parent=gene-J4731_20410;Note=frameshifted%3B internal stop;gbkey=CDS;gene=purE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005289343.1;locus_tag=J4731_20410;product=5-(carboxyamino)imidazole ribonucleotide mutase;pseudo=true;transl_table=11
JAGETS010000064.1	Genbank	gene	54051	54416	.	-	.	ID=gene-J4731_20415;Name=J4731_20415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_20415
JAGETS010000064.1	Protein Homology	CDS	54051	54416	.	-	0	ID=cds-MBO1929661.1;Parent=gene-J4731_20415;Dbxref=NCBI_GP:MBO1929661.1;Name=MBO1929661.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF003743.0;locus_tag=J4731_20415;product=hypothetical protein;protein_id=MBO1929661.1;transl_table=11
JAGETS010000064.1	Genbank	pseudogene	54703	55190	.	-	.	ID=gene-J4731_20420;Name=ppiB;gbkey=Gene;gene=ppiB;gene_biotype=pseudogene;locus_tag=J4731_20420;pseudo=true
JAGETS010000064.1	Protein Homology	CDS	54703	55190	.	-	0	ID=cds-J4731_20420;Parent=gene-J4731_20420;Note=frameshifted%3B internal stop;gbkey=CDS;gene=ppiB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017465360.1;locus_tag=J4731_20420;product=peptidylprolyl isomerase B;pseudo=true;transl_table=11
JAGETS010000064.1	Genbank	pseudogene	55455	56838	.	+	.	ID=gene-J4731_20425;Name=cysS;gbkey=Gene;gene=cysS;gene_biotype=pseudogene;locus_tag=J4731_20425;pseudo=true
JAGETS010000064.1	Protein Homology	CDS	55455	56838	.	+	0	ID=cds-J4731_20425;Parent=gene-J4731_20425;Note=frameshifted%3B internal stop;gbkey=CDS;gene=cysS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005125243.1;locus_tag=J4731_20425;product=cysteine--tRNA ligase;pseudo=true;transl_table=11
JAGETS010000064.1	Genbank	gene	58577	58735	.	-	.	ID=gene-J4731_20430;Name=J4731_20430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_20430
JAGETS010000064.1	GeneMarkS-2+	CDS	58577	58735	.	-	0	ID=cds-MBO1929662.1;Parent=gene-J4731_20430;Dbxref=NCBI_GP:MBO1929662.1;Name=MBO1929662.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_20430;product=hypothetical protein;protein_id=MBO1929662.1;transl_table=11
JAGETS010000064.1	Genbank	gene	59145	59588	.	+	.	ID=gene-J4731_20435;Name=J4731_20435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_20435
JAGETS010000064.1	GeneMarkS-2+	CDS	59145	59588	.	+	0	ID=cds-MBO1929663.1;Parent=gene-J4731_20435;Dbxref=NCBI_GP:MBO1929663.1;Name=MBO1929663.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_20435;product=hypothetical protein;protein_id=MBO1929663.1;transl_table=11
##sequence-region JAGETS010000065.1 1 4748
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=587
JAGETS010000065.1	Genbank	region	1	4748	.	+	.	ID=JAGETS010000065.1:1..4748;Dbxref=taxon:587;collected-by=NHLS;collection-date=2018;country=South Africa: Pretoria;gbkey=Src;isolation-source=stool;lat-lon=25.7479 S 28.2293 E;mol_type=genomic DNA;nat-host=porcine;strain=SG003
JAGETS010000065.1	Genbank	gene	1	243	.	-	.	ID=gene-J4731_20440;Name=J4731_20440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_20440;partial=true;start_range=.,1
JAGETS010000065.1	GeneMarkS-2+	CDS	1	243	.	-	0	ID=cds-MBO1929664.1;Parent=gene-J4731_20440;Dbxref=NCBI_GP:MBO1929664.1;Name=MBO1929664.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_20440;partial=true;product=hypothetical protein;protein_id=MBO1929664.1;start_range=.,1;transl_table=11
JAGETS010000065.1	Genbank	gene	240	464	.	-	.	ID=gene-J4731_20445;Name=J4731_20445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_20445
JAGETS010000065.1	GeneMarkS-2+	CDS	240	464	.	-	0	ID=cds-MBO1929665.1;Parent=gene-J4731_20445;Dbxref=NCBI_GP:MBO1929665.1;Name=MBO1929665.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_20445;product=hypothetical protein;protein_id=MBO1929665.1;transl_table=11
JAGETS010000065.1	Genbank	pseudogene	1068	1663	.	-	.	ID=gene-J4731_20450;Name=J4731_20450;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_20450;pseudo=true
JAGETS010000065.1	Protein Homology	CDS	1068	1663	.	-	0	ID=cds-J4731_20450;Parent=gene-J4731_20450;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004943345.1;locus_tag=J4731_20450;product=QnrD family quinolone resistance pentapeptide repeat protein;pseudo=true;transl_table=11
JAGETS010000065.1	Genbank	gene	1947	2123	.	-	.	ID=gene-J4731_20455;Name=J4731_20455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_20455
JAGETS010000065.1	GeneMarkS-2+	CDS	1947	2123	.	-	0	ID=cds-MBO1929666.1;Parent=gene-J4731_20455;Dbxref=NCBI_GP:MBO1929666.1;Name=MBO1929666.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_20455;product=hypothetical protein;protein_id=MBO1929666.1;transl_table=11
JAGETS010000065.1	Genbank	gene	2243	2383	.	-	.	ID=gene-J4731_20460;Name=J4731_20460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_20460
JAGETS010000065.1	GeneMarkS-2+	CDS	2243	2383	.	-	0	ID=cds-MBO1929667.1;Parent=gene-J4731_20460;Dbxref=NCBI_GP:MBO1929667.1;Name=MBO1929667.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_20460;product=hypothetical protein;protein_id=MBO1929667.1;transl_table=11
JAGETS010000065.1	Genbank	gene	2693	2884	.	-	.	ID=gene-J4731_20465;Name=J4731_20465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_20465
JAGETS010000065.1	GeneMarkS-2+	CDS	2693	2884	.	-	0	ID=cds-MBO1929668.1;Parent=gene-J4731_20465;Dbxref=NCBI_GP:MBO1929668.1;Name=MBO1929668.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_20465;product=hypothetical protein;protein_id=MBO1929668.1;transl_table=11
JAGETS010000065.1	Genbank	gene	2881	3024	.	-	.	ID=gene-J4731_20470;Name=J4731_20470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_20470
JAGETS010000065.1	GeneMarkS-2+	CDS	2881	3024	.	-	0	ID=cds-MBO1929669.1;Parent=gene-J4731_20470;Dbxref=NCBI_GP:MBO1929669.1;Name=MBO1929669.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_20470;product=hypothetical protein;protein_id=MBO1929669.1;transl_table=11
JAGETS010000065.1	Genbank	gene	3539	3676	.	+	.	ID=gene-J4731_20475;Name=J4731_20475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_20475
JAGETS010000065.1	GeneMarkS-2+	CDS	3539	3676	.	+	0	ID=cds-MBO1929670.1;Parent=gene-J4731_20475;Dbxref=NCBI_GP:MBO1929670.1;Name=MBO1929670.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_20475;product=hypothetical protein;protein_id=MBO1929670.1;transl_table=11
JAGETS010000065.1	Genbank	pseudogene	3714	4328	.	-	.	ID=gene-J4731_20480;Name=J4731_20480;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_20480;pseudo=true
JAGETS010000065.1	Protein Homology	CDS	3714	4328	.	-	0	ID=cds-J4731_20480;Parent=gene-J4731_20480;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017900990.1;locus_tag=J4731_20480;product=Qnr family pentapeptide repeat protein;pseudo=true;transl_table=11
JAGETS010000065.1	Genbank	gene	4521	4748	.	-	.	ID=gene-J4731_20485;Name=J4731_20485;end_range=4748,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_20485;partial=true
JAGETS010000065.1	GeneMarkS-2+	CDS	4521	4748	.	-	0	ID=cds-MBO1929671.1;Parent=gene-J4731_20485;Dbxref=NCBI_GP:MBO1929671.1;Name=MBO1929671.1;end_range=4748,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_20485;partial=true;product=hypothetical protein;protein_id=MBO1929671.1;transl_table=11
##sequence-region JAGETS010000066.1 1 5274
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=587
JAGETS010000066.1	Genbank	region	1	5274	.	+	.	ID=JAGETS010000066.1:1..5274;Dbxref=taxon:587;collected-by=NHLS;collection-date=2018;country=South Africa: Pretoria;gbkey=Src;isolation-source=stool;lat-lon=25.7479 S 28.2293 E;mol_type=genomic DNA;nat-host=porcine;strain=SG003
JAGETS010000066.1	Genbank	gene	134	367	.	-	.	ID=gene-J4731_20490;Name=J4731_20490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_20490
JAGETS010000066.1	GeneMarkS-2+	CDS	134	367	.	-	0	ID=cds-MBO1929672.1;Parent=gene-J4731_20490;Dbxref=NCBI_GP:MBO1929672.1;Name=MBO1929672.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_20490;product=hypothetical protein;protein_id=MBO1929672.1;transl_table=11
JAGETS010000066.1	Genbank	gene	410	550	.	-	.	ID=gene-J4731_20495;Name=J4731_20495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_20495
JAGETS010000066.1	GeneMarkS-2+	CDS	410	550	.	-	0	ID=cds-MBO1929673.1;Parent=gene-J4731_20495;Dbxref=NCBI_GP:MBO1929673.1;Name=MBO1929673.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_20495;product=hypothetical protein;protein_id=MBO1929673.1;transl_table=11
JAGETS010000066.1	Genbank	pseudogene	1192	1835	.	-	.	ID=gene-J4731_20500;Name=J4731_20500;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_20500;pseudo=true
JAGETS010000066.1	Protein Homology	CDS	1192	1835	.	-	0	ID=cds-J4731_20500;Parent=gene-J4731_20500;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_032495680.1;locus_tag=J4731_20500;product=QnrD family quinolone resistance pentapeptide repeat protein;pseudo=true;transl_table=11
JAGETS010000066.1	Genbank	gene	2032	2316	.	-	.	ID=gene-J4731_20505;Name=J4731_20505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_20505
JAGETS010000066.1	GeneMarkS-2+	CDS	2032	2316	.	-	0	ID=cds-MBO1929674.1;Parent=gene-J4731_20505;Dbxref=NCBI_GP:MBO1929674.1;Name=MBO1929674.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_20505;product=hypothetical protein;protein_id=MBO1929674.1;transl_table=11
JAGETS010000066.1	Genbank	gene	2313	2513	.	-	.	ID=gene-J4731_20510;Name=J4731_20510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_20510
JAGETS010000066.1	GeneMarkS-2+	CDS	2313	2513	.	-	0	ID=cds-MBO1929675.1;Parent=gene-J4731_20510;Dbxref=NCBI_GP:MBO1929675.1;Name=MBO1929675.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_20510;product=hypothetical protein;protein_id=MBO1929675.1;transl_table=11
JAGETS010000066.1	Genbank	gene	2782	3003	.	-	.	ID=gene-J4731_20515;Name=J4731_20515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_20515
JAGETS010000066.1	GeneMarkS-2+	CDS	2782	3003	.	-	0	ID=cds-MBO1929676.1;Parent=gene-J4731_20515;Dbxref=NCBI_GP:MBO1929676.1;Name=MBO1929676.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_20515;product=hypothetical protein;protein_id=MBO1929676.1;transl_table=11
JAGETS010000066.1	Genbank	gene	3014	3220	.	-	.	ID=gene-J4731_20520;Name=J4731_20520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_20520
JAGETS010000066.1	GeneMarkS-2+	CDS	3014	3220	.	-	0	ID=cds-MBO1929677.1;Parent=gene-J4731_20520;Dbxref=NCBI_GP:MBO1929677.1;Name=MBO1929677.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_20520;product=hypothetical protein;protein_id=MBO1929677.1;transl_table=11
JAGETS010000066.1	Genbank	pseudogene	3853	4494	.	-	.	ID=gene-J4731_20525;Name=J4731_20525;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_20525;pseudo=true
JAGETS010000066.1	Protein Homology	CDS	3853	4494	.	-	0	ID=cds-J4731_20525;Parent=gene-J4731_20525;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_032495680.1;locus_tag=J4731_20525;product=QnrD family quinolone resistance pentapeptide repeat protein;pseudo=true;transl_table=11
JAGETS010000066.1	Genbank	gene	4690	4971	.	-	.	ID=gene-J4731_20530;Name=J4731_20530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_20530
JAGETS010000066.1	GeneMarkS-2+	CDS	4690	4971	.	-	0	ID=cds-MBO1929678.1;Parent=gene-J4731_20530;Dbxref=NCBI_GP:MBO1929678.1;Name=MBO1929678.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_20530;product=hypothetical protein;protein_id=MBO1929678.1;transl_table=11
##sequence-region JAGETS010000067.1 1 6101
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=587
JAGETS010000067.1	Genbank	region	1	6101	.	+	.	ID=JAGETS010000067.1:1..6101;Dbxref=taxon:587;collected-by=NHLS;collection-date=2018;country=South Africa: Pretoria;gbkey=Src;isolation-source=stool;lat-lon=25.7479 S 28.2293 E;mol_type=genomic DNA;nat-host=porcine;strain=SG003
JAGETS010000067.1	Genbank	gene	222	380	.	-	.	ID=gene-J4731_20535;Name=J4731_20535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_20535
JAGETS010000067.1	GeneMarkS-2+	CDS	222	380	.	-	0	ID=cds-MBO1929679.1;Parent=gene-J4731_20535;Dbxref=NCBI_GP:MBO1929679.1;Name=MBO1929679.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_20535;product=hypothetical protein;protein_id=MBO1929679.1;transl_table=11
JAGETS010000067.1	Genbank	pseudogene	1014	1657	.	-	.	ID=gene-J4731_20540;Name=J4731_20540;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_20540;pseudo=true
JAGETS010000067.1	Protein Homology	CDS	1014	1657	.	-	0	ID=cds-J4731_20540;Parent=gene-J4731_20540;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_032495680.1;locus_tag=J4731_20540;product=QnrD family quinolone resistance pentapeptide repeat protein;pseudo=true;transl_table=11
JAGETS010000067.1	Genbank	gene	1854	2201	.	-	.	ID=gene-J4731_20545;Name=J4731_20545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_20545
JAGETS010000067.1	GeneMarkS-2+	CDS	1854	2201	.	-	0	ID=cds-MBO1929680.1;Parent=gene-J4731_20545;Dbxref=NCBI_GP:MBO1929680.1;Name=MBO1929680.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_20545;product=hypothetical protein;protein_id=MBO1929680.1;transl_table=11
JAGETS010000067.1	Genbank	gene	2194	2331	.	-	.	ID=gene-J4731_20550;Name=J4731_20550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_20550
JAGETS010000067.1	GeneMarkS-2+	CDS	2194	2331	.	-	0	ID=cds-MBO1929681.1;Parent=gene-J4731_20550;Dbxref=NCBI_GP:MBO1929681.1;Name=MBO1929681.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_20550;product=hypothetical protein;protein_id=MBO1929681.1;transl_table=11
JAGETS010000067.1	Genbank	gene	2598	2834	.	-	.	ID=gene-J4731_20555;Name=J4731_20555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_20555
JAGETS010000067.1	GeneMarkS-2+	CDS	2598	2834	.	-	0	ID=cds-MBO1929682.1;Parent=gene-J4731_20555;Dbxref=NCBI_GP:MBO1929682.1;Name=MBO1929682.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_20555;product=hypothetical protein;protein_id=MBO1929682.1;transl_table=11
JAGETS010000067.1	Genbank	gene	2831	3037	.	-	.	ID=gene-J4731_20560;Name=J4731_20560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_20560
JAGETS010000067.1	GeneMarkS-2+	CDS	2831	3037	.	-	0	ID=cds-MBO1929683.1;Parent=gene-J4731_20560;Dbxref=NCBI_GP:MBO1929683.1;Name=MBO1929683.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_20560;product=hypothetical protein;protein_id=MBO1929683.1;transl_table=11
JAGETS010000067.1	Genbank	pseudogene	3671	4313	.	-	.	ID=gene-J4731_20565;Name=J4731_20565;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_20565;pseudo=true
JAGETS010000067.1	Protein Homology	CDS	3671	4313	.	-	0	ID=cds-J4731_20565;Parent=gene-J4731_20565;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_032495680.1;locus_tag=J4731_20565;product=QnrD family quinolone resistance pentapeptide repeat protein;pseudo=true;transl_table=11
JAGETS010000067.1	Genbank	gene	4594	4974	.	-	.	ID=gene-J4731_20570;Name=J4731_20570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_20570
JAGETS010000067.1	GeneMarkS-2+	CDS	4594	4974	.	-	0	ID=cds-MBO1929684.1;Parent=gene-J4731_20570;Dbxref=NCBI_GP:MBO1929684.1;Name=MBO1929684.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_20570;product=hypothetical protein;protein_id=MBO1929684.1;transl_table=11
JAGETS010000067.1	Genbank	gene	5287	5478	.	-	.	ID=gene-J4731_20575;Name=J4731_20575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_20575
JAGETS010000067.1	GeneMarkS-2+	CDS	5287	5478	.	-	0	ID=cds-MBO1929685.1;Parent=gene-J4731_20575;Dbxref=NCBI_GP:MBO1929685.1;Name=MBO1929685.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_20575;product=hypothetical protein;protein_id=MBO1929685.1;transl_table=11
JAGETS010000067.1	Genbank	gene	5475	5681	.	-	.	ID=gene-J4731_20580;Name=J4731_20580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_20580
JAGETS010000067.1	GeneMarkS-2+	CDS	5475	5681	.	-	0	ID=cds-MBO1929686.1;Parent=gene-J4731_20580;Dbxref=NCBI_GP:MBO1929686.1;Name=MBO1929686.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_20580;product=hypothetical protein;protein_id=MBO1929686.1;transl_table=11
##sequence-region JAGETS010000068.1 1 5291
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=587
JAGETS010000068.1	Genbank	region	1	5291	.	+	.	ID=JAGETS010000068.1:1..5291;Dbxref=taxon:587;collected-by=NHLS;collection-date=2018;country=South Africa: Pretoria;gbkey=Src;isolation-source=stool;lat-lon=25.7479 S 28.2293 E;mol_type=genomic DNA;nat-host=porcine;strain=SG003
JAGETS010000068.1	Genbank	pseudogene	193	833	.	-	.	ID=gene-J4731_20585;Name=J4731_20585;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_20585;pseudo=true
JAGETS010000068.1	Protein Homology	CDS	193	833	.	-	0	ID=cds-J4731_20585;Parent=gene-J4731_20585;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_032495680.1;locus_tag=J4731_20585;product=QnrD family quinolone resistance pentapeptide repeat protein;pseudo=true;transl_table=11
JAGETS010000068.1	Genbank	gene	1122	1511	.	-	.	ID=gene-J4731_20590;Name=J4731_20590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_20590
JAGETS010000068.1	GeneMarkS-2+	CDS	1122	1511	.	-	0	ID=cds-MBO1929687.1;Parent=gene-J4731_20590;Dbxref=NCBI_GP:MBO1929687.1;Name=MBO1929687.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_20590;product=hypothetical protein;protein_id=MBO1929687.1;transl_table=11
JAGETS010000068.1	Genbank	gene	1824	1979	.	-	.	ID=gene-J4731_20595;Name=J4731_20595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_20595
JAGETS010000068.1	GeneMarkS-2+	CDS	1824	1979	.	-	0	ID=cds-MBO1929688.1;Parent=gene-J4731_20595;Dbxref=NCBI_GP:MBO1929688.1;Name=MBO1929688.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_20595;product=hypothetical protein;protein_id=MBO1929688.1;transl_table=11
JAGETS010000068.1	Genbank	gene	2011	2217	.	-	.	ID=gene-J4731_20600;Name=J4731_20600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_20600
JAGETS010000068.1	GeneMarkS-2+	CDS	2011	2217	.	-	0	ID=cds-MBO1929689.1;Parent=gene-J4731_20600;Dbxref=NCBI_GP:MBO1929689.1;Name=MBO1929689.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_20600;product=hypothetical protein;protein_id=MBO1929689.1;transl_table=11
JAGETS010000068.1	Genbank	pseudogene	2849	3450	.	-	.	ID=gene-J4731_20605;Name=J4731_20605;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_20605;pseudo=true
JAGETS010000068.1	Protein Homology	CDS	2849	3450	.	-	0	ID=cds-J4731_20605;Parent=gene-J4731_20605;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004943345.1;locus_tag=J4731_20605;product=QnrD family quinolone resistance pentapeptide repeat protein;pseudo=true;transl_table=11
JAGETS010000068.1	Genbank	gene	3664	4167	.	-	.	ID=gene-J4731_20610;Name=J4731_20610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_20610
JAGETS010000068.1	GeneMarkS-2+	CDS	3664	4167	.	-	0	ID=cds-MBO1929690.1;Parent=gene-J4731_20610;Dbxref=NCBI_GP:MBO1929690.1;Name=MBO1929690.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_20610;product=hypothetical protein;protein_id=MBO1929690.1;transl_table=11
JAGETS010000068.1	Genbank	gene	4433	4669	.	-	.	ID=gene-J4731_20615;Name=J4731_20615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_20615
JAGETS010000068.1	GeneMarkS-2+	CDS	4433	4669	.	-	0	ID=cds-MBO1929691.1;Parent=gene-J4731_20615;Dbxref=NCBI_GP:MBO1929691.1;Name=MBO1929691.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_20615;product=hypothetical protein;protein_id=MBO1929691.1;transl_table=11
JAGETS010000068.1	Genbank	gene	4666	4872	.	-	.	ID=gene-J4731_20620;Name=J4731_20620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_20620
JAGETS010000068.1	GeneMarkS-2+	CDS	4666	4872	.	-	0	ID=cds-MBO1929692.1;Parent=gene-J4731_20620;Dbxref=NCBI_GP:MBO1929692.1;Name=MBO1929692.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_20620;product=hypothetical protein;protein_id=MBO1929692.1;transl_table=11
##sequence-region JAGETS010000069.1 1 4548
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=587
JAGETS010000069.1	Genbank	region	1	4548	.	+	.	ID=JAGETS010000069.1:1..4548;Dbxref=taxon:587;collected-by=NHLS;collection-date=2018;country=South Africa: Pretoria;gbkey=Src;isolation-source=stool;lat-lon=25.7479 S 28.2293 E;mol_type=genomic DNA;nat-host=porcine;strain=SG003
JAGETS010000069.1	Genbank	pseudogene	333	969	.	-	.	ID=gene-J4731_20625;Name=J4731_20625;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_20625;pseudo=true
JAGETS010000069.1	Protein Homology	CDS	333	969	.	-	0	ID=cds-J4731_20625;Parent=gene-J4731_20625;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_032495680.1;locus_tag=J4731_20625;product=QnrD family quinolone resistance pentapeptide repeat protein;pseudo=true;transl_table=11
JAGETS010000069.1	Genbank	gene	1166	1648	.	-	.	ID=gene-J4731_20630;Name=J4731_20630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_20630
JAGETS010000069.1	GeneMarkS-2+	CDS	1166	1648	.	-	0	ID=cds-MBO1929693.1;Parent=gene-J4731_20630;Dbxref=NCBI_GP:MBO1929693.1;Name=MBO1929693.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_20630;product=hypothetical protein;protein_id=MBO1929693.1;transl_table=11
JAGETS010000069.1	Genbank	gene	1959	2150	.	-	.	ID=gene-J4731_20635;Name=J4731_20635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_20635
JAGETS010000069.1	GeneMarkS-2+	CDS	1959	2150	.	-	0	ID=cds-MBO1929694.1;Parent=gene-J4731_20635;Dbxref=NCBI_GP:MBO1929694.1;Name=MBO1929694.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_20635;product=hypothetical protein;protein_id=MBO1929694.1;transl_table=11
JAGETS010000069.1	Genbank	gene	2147	2353	.	-	.	ID=gene-J4731_20640;Name=J4731_20640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_20640
JAGETS010000069.1	GeneMarkS-2+	CDS	2147	2353	.	-	0	ID=cds-MBO1929695.1;Parent=gene-J4731_20640;Dbxref=NCBI_GP:MBO1929695.1;Name=MBO1929695.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_20640;product=hypothetical protein;protein_id=MBO1929695.1;transl_table=11
JAGETS010000069.1	Genbank	pseudogene	2989	3587	.	-	.	ID=gene-J4731_20645;Name=J4731_20645;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_20645;pseudo=true
JAGETS010000069.1	Protein Homology	CDS	2989	3587	.	-	0	ID=cds-J4731_20645;Parent=gene-J4731_20645;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004943345.1;locus_tag=J4731_20645;product=QnrD family quinolone resistance pentapeptide repeat protein;pseudo=true;transl_table=11
JAGETS010000069.1	Genbank	gene	3913	4302	.	-	.	ID=gene-J4731_20650;Name=J4731_20650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_20650
JAGETS010000069.1	GeneMarkS-2+	CDS	3913	4302	.	-	0	ID=cds-MBO1929696.1;Parent=gene-J4731_20650;Dbxref=NCBI_GP:MBO1929696.1;Name=MBO1929696.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_20650;product=hypothetical protein;protein_id=MBO1929696.1;transl_table=11
##sequence-region JAGETS010000007.1 1 311340
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=587
JAGETS010000007.1	Genbank	region	1	311340	.	+	.	ID=JAGETS010000007.1:1..311340;Dbxref=taxon:587;collected-by=NHLS;collection-date=2018;country=South Africa: Pretoria;gbkey=Src;isolation-source=stool;lat-lon=25.7479 S 28.2293 E;mol_type=genomic DNA;nat-host=porcine;strain=SG003
JAGETS010000007.1	Genbank	pseudogene	56	212	.	-	.	ID=gene-J4731_03000;Name=J4731_03000;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_03000;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	56	212	.	-	0	ID=cds-J4731_03000;Parent=gene-J4731_03000;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011148384.1;locus_tag=J4731_03000;product=nucleoside hydrolase;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	472	1204	.	+	.	ID=gene-J4731_03005;Name=J4731_03005;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_03005;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	472	1204	.	+	0	ID=cds-J4731_03005;Parent=gene-J4731_03005;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004905785.1;locus_tag=J4731_03005;product=helix-turn-helix transcriptional regulator;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	1540	2837	.	+	.	ID=gene-J4731_03010;Name=J4731_03010;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_03010;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	1540	2837	.	+	0	ID=cds-J4731_03010;Parent=gene-J4731_03010;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015376516.1;locus_tag=J4731_03010;product=FAD-binding oxidoreductase;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	2886	3251	.	+	.	ID=gene-J4731_03015;Name=J4731_03015;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_03015;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	2886	3251	.	+	0	ID=cds-J4731_03015;Parent=gene-J4731_03015;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008913228.1;locus_tag=J4731_03015;product=DUF861 domain-containing protein;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	3280	4755	.	+	.	ID=gene-J4731_03020;Name=J4731_03020;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_03020;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	3280	4755	.	+	0	ID=cds-J4731_03020;Parent=gene-J4731_03020;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006657084.1;locus_tag=J4731_03020;product=aldehyde dehydrogenase family protein;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	4950	5607	.	+	.	ID=gene-J4731_03025;Name=J4731_03025;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_03025;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	4950	5607	.	+	0	ID=cds-J4731_03025;Parent=gene-J4731_03025;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019455642.1;locus_tag=J4731_03025;product=SDR family oxidoreductase;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	5616	6275	.	-	.	ID=gene-J4731_03030;Name=J4731_03030;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_03030;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	5616	6275	.	-	0	ID=cds-J4731_03030;Parent=gene-J4731_03030;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006815913.1;locus_tag=J4731_03030;product=LuxR family transcriptional regulator;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	6668	8144	.	+	.	ID=gene-J4731_03035;Name=J4731_03035;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_03035;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	6668	8144	.	+	0	ID=cds-J4731_03035;Parent=gene-J4731_03035;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004926576.1;locus_tag=J4731_03035;product=APC family permease;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	8095	8721	.	+	.	ID=gene-J4731_03040;Name=J4731_03040;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_03040;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	8095	8721	.	+	0	ID=cds-J4731_03040;Parent=gene-J4731_03040;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006662845.1;locus_tag=J4731_03040;product=DUF3156 family protein;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	8775	10327	.	+	.	ID=gene-J4731_03045;Name=J4731_03045;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_03045;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	8775	10327	.	+	0	ID=cds-J4731_03045;Parent=gene-J4731_03045;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004926581.1;locus_tag=J4731_03045;product=DUF3327 domain-containing protein;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	10605	11920	.	+	.	ID=gene-J4731_03050;Name=phoA;gbkey=Gene;gene=phoA;gene_biotype=pseudogene;locus_tag=J4731_03050;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	10605	11920	.	+	0	ID=cds-J4731_03050;Parent=gene-J4731_03050;Note=frameshifted%3B internal stop;gbkey=CDS;gene=phoA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014228141.1;locus_tag=J4731_03050;product=alkaline phosphatase;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	12131	12637	.	+	.	ID=gene-J4731_03055;Name=J4731_03055;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_03055;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	12131	12637	.	+	0	ID=cds-J4731_03055;Parent=gene-J4731_03055;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006536125.1;locus_tag=J4731_03055;product=GNAT family N-acetyltransferase;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	gene	12754	13008	.	+	.	ID=gene-J4731_03060;Name=J4731_03060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_03060
JAGETS010000007.1	Protein Homology	CDS	12754	13008	.	+	0	ID=cds-MBO1928723.1;Parent=gene-J4731_03060;Dbxref=NCBI_GP:MBO1928723.1;Name=MBO1928723.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004905763.1;locus_tag=J4731_03060;product=DUF1435 family protein;protein_id=MBO1928723.1;transl_table=11
JAGETS010000007.1	Genbank	gene	13202	13286	.	-	.	ID=gene-J4731_03065;Name=J4731_03065;gbkey=Gene;gene_biotype=tRNA;locus_tag=J4731_03065
JAGETS010000007.1	tRNAscan-SE	tRNA	13202	13286	.	-	.	ID=rna-J4731_03065;Parent=gene-J4731_03065;anticodon=(pos:complement(13250..13252));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=J4731_03065;product=tRNA-Leu
JAGETS010000007.1	tRNAscan-SE	exon	13202	13286	.	-	.	ID=exon-J4731_03065-1;Parent=rna-J4731_03065;anticodon=(pos:complement(13250..13252));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=J4731_03065;product=tRNA-Leu
JAGETS010000007.1	Genbank	pseudogene	13608	14591	.	-	.	ID=gene-J4731_03070;Name=rsmC;gbkey=Gene;gene=rsmC;gene_biotype=pseudogene;locus_tag=J4731_03070;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	13608	14591	.	-	0	ID=cds-J4731_03070;Parent=gene-J4731_03070;Note=frameshifted%3B internal stop;gbkey=CDS;gene=rsmC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004242071.1;locus_tag=J4731_03070;product=16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	14724	15127	.	+	.	ID=gene-J4731_03075;Name=J4731_03075;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_03075;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	14724	15127	.	+	0	ID=cds-J4731_03075;Parent=gene-J4731_03075;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006657092.1;locus_tag=J4731_03075;product=DNA polymerase III subunit psi;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	15096	15469	.	+	.	ID=gene-J4731_03080;Name=rimI;gbkey=Gene;gene=rimI;gene_biotype=pseudogene;locus_tag=J4731_03080;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	15096	15469	.	+	0	ID=cds-J4731_03080;Parent=gene-J4731_03080;Note=frameshifted%3B internal stop;gbkey=CDS;gene=rimI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002216075.1;locus_tag=J4731_03080;product=ribosomal protein S18-alanine N-acetyltransferase;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	15616	17140	.	-	.	ID=gene-J4731_03085;Name=J4731_03085;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_03085;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	15616	17140	.	-	0	ID=cds-J4731_03085;Parent=gene-J4731_03085;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014656834.1;locus_tag=J4731_03085;product=BCCT family transporter;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	17473	18582	.	+	.	ID=gene-J4731_03090;Name=J4731_03090;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_03090;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	17473	18582	.	+	0	ID=cds-J4731_03090;Parent=gene-J4731_03090;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000067822.1;locus_tag=J4731_03090;product=aromatic ring-hydroxylating dioxygenase subunit alpha;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	18625	20058	.	+	.	ID=gene-J4731_03095;Name=J4731_03095;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_03095;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	18625	20058	.	+	0	ID=cds-J4731_03095;Parent=gene-J4731_03095;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004133793.1;locus_tag=J4731_03095;product=NAD-dependent succinate-semialdehyde dehydrogenase;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	20075	21023	.	+	.	ID=gene-J4731_03100;Name=J4731_03100;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_03100;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	20075	21023	.	+	0	ID=cds-J4731_03100;Parent=gene-J4731_03100;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004926619.1;locus_tag=J4731_03100;product=oxidoreductase;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	21092	21971	.	-	.	ID=gene-J4731_03105;Name=J4731_03105;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_03105;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	21092	21971	.	-	0	ID=cds-J4731_03105;Parent=gene-J4731_03105;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004926622.1;locus_tag=J4731_03105;product=helix-turn-helix domain-containing protein;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	22006	22915	.	-	.	ID=gene-J4731_03110;Name=J4731_03110;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_03110;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	22006	22915	.	-	0	ID=cds-J4731_03110;Parent=gene-J4731_03110;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004905744.1;locus_tag=J4731_03110;product=LysR family transcriptional regulator;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	23018	24072	.	+	.	ID=gene-J4731_03115;Name=J4731_03115;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_03115;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	23018	24072	.	+	0	ID=cds-J4731_03115;Parent=gene-J4731_03115;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004926627.1;locus_tag=J4731_03115;product=tartrate dehydrogenase;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	24284	25854	.	+	.	ID=gene-J4731_03120;Name=prfC;gbkey=Gene;gene=prfC;gene_biotype=pseudogene;locus_tag=J4731_03120;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	24284	25854	.	+	0	ID=cds-J4731_03120;Parent=gene-J4731_03120;Note=frameshifted;gbkey=CDS;gene=prfC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123889.1;locus_tag=J4731_03120;product=peptide chain release factor 3;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	26042	26450	.	+	.	ID=gene-J4731_03125;Name=J4731_03125;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_03125;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	26042	26450	.	+	0	ID=cds-J4731_03125;Parent=gene-J4731_03125;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006657098.1;locus_tag=J4731_03125;product=BON domain-containing protein;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	26582	27673	.	+	.	ID=gene-J4731_03130;Name=J4731_03130;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_03130;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	26582	27673	.	+	0	ID=cds-J4731_03130;Parent=gene-J4731_03130;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004905737.1;locus_tag=J4731_03130;product=patatin-like phospholipase family protein;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	27654	28445	.	+	.	ID=gene-J4731_03135;Name=J4731_03135;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_03135;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	27654	28445	.	+	0	ID=cds-J4731_03135;Parent=gene-J4731_03135;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004905736.1;locus_tag=J4731_03135;product=TatD family hydrolase;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	28737	30029	.	+	.	ID=gene-J4731_03140;Name=J4731_03140;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_03140;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	28737	30029	.	+	0	ID=cds-J4731_03140;Parent=gene-J4731_03140;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004926641.1;locus_tag=J4731_03140;product=NupC/NupG family nucleoside CNT transporter;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	30501	31300	.	+	.	ID=gene-J4731_03145;Name=deoC;gbkey=Gene;gene=deoC;gene_biotype=pseudogene;locus_tag=J4731_03145;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	30501	31300	.	+	0	ID=cds-J4731_03145;Parent=gene-J4731_03145;Note=frameshifted;gbkey=CDS;gene=deoC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418798.1;locus_tag=J4731_03145;product=deoxyribose-phosphate aldolase;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	31324	32622	.	+	.	ID=gene-J4731_03150;Name=deoA;gbkey=Gene;gene=deoA;gene_biotype=pseudogene;locus_tag=J4731_03150;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	31324	32622	.	+	0	ID=cds-J4731_03150;Parent=gene-J4731_03150;Note=frameshifted;gbkey=CDS;gene=deoA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123902.1;locus_tag=J4731_03150;product=thymidine phosphorylase;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	32674	33886	.	+	.	ID=gene-J4731_03155;Name=deoB;gbkey=Gene;gene=deoB;gene_biotype=pseudogene;locus_tag=J4731_03155;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	32674	33886	.	+	0	ID=cds-J4731_03155;Parent=gene-J4731_03155;Note=frameshifted;gbkey=CDS;gene=deoB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463425.1;locus_tag=J4731_03155;product=phosphopentomutase;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	34338	35051	.	+	.	ID=gene-J4731_03160;Name=deoD;gbkey=Gene;gene=deoD;gene_biotype=pseudogene;locus_tag=J4731_03160;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	34338	35051	.	+	0	ID=cds-J4731_03160;Parent=gene-J4731_03160;Note=frameshifted%3B internal stop;gbkey=CDS;gene=deoD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_710124.2;locus_tag=J4731_03160;product=purine-nucleoside phosphorylase;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	35110	35599	.	-	.	ID=gene-J4731_03165;Name=J4731_03165;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_03165;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	35110	35599	.	-	0	ID=cds-J4731_03165;Parent=gene-J4731_03165;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006815887.1;locus_tag=J4731_03165;product=GNAT family N-acetyltransferase;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	gene	36199	36849	.	+	.	ID=gene-J4731_03170;Name=J4731_03170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_03170
JAGETS010000007.1	GeneMarkS-2+	CDS	36199	36849	.	+	0	ID=cds-MBO1928724.1;Parent=gene-J4731_03170;Dbxref=NCBI_GP:MBO1928724.1;Name=MBO1928724.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_03170;product=hypothetical protein;protein_id=MBO1928724.1;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	37028	39802	.	-	.	ID=gene-J4731_03175;Name=J4731_03175;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_03175;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	37028	39802	.	-	0	ID=cds-J4731_03175;Parent=gene-J4731_03175;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004248943.1;locus_tag=J4731_03175;product=insulinase family protein;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	39792	41488	.	-	.	ID=gene-J4731_03180;Name=J4731_03180;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_03180;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	39792	41488	.	-	0	ID=cds-J4731_03180;Parent=gene-J4731_03180;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008913261.1;locus_tag=J4731_03180;product=ABC transporter ATP-binding protein/permease;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	41552	44280	.	-	.	ID=gene-J4731_03185;Name=J4731_03185;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_03185;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	41552	44280	.	-	0	ID=cds-J4731_03185;Parent=gene-J4731_03185;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006662832.1;locus_tag=J4731_03185;product=TonB-dependent receptor plug domain-containing protein;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	44401	45360	.	-	.	ID=gene-J4731_03190;Name=J4731_03190;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_03190;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	44401	45360	.	-	0	ID=cds-J4731_03190;Parent=gene-J4731_03190;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006815881.1;locus_tag=J4731_03190;product=FecR domain-containing protein;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	45405	45904	.	-	.	ID=gene-J4731_03195;Name=J4731_03195;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_03195;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	45405	45904	.	-	0	ID=cds-J4731_03195;Parent=gene-J4731_03195;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004248947.1;locus_tag=J4731_03195;product=RNA polymerase sigma factor;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	46083	46859	.	+	.	ID=gene-J4731_03200;Name=J4731_03200;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_03200;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	46083	46859	.	+	0	ID=cds-J4731_03200;Parent=gene-J4731_03200;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004926672.1;locus_tag=J4731_03200;product=energy transducer TonB;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	46927	47654	.	-	.	ID=gene-J4731_03205;Name=J4731_03205;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_03205;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	46927	47654	.	-	0	ID=cds-J4731_03205;Parent=gene-J4731_03205;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006815878.1;locus_tag=J4731_03205;product=protein smp;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	48054	48885	.	+	.	ID=gene-J4731_03210;Name=serB;gbkey=Gene;gene=serB;gene_biotype=pseudogene;locus_tag=J4731_03210;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	48054	48885	.	+	0	ID=cds-J4731_03210;Parent=gene-J4731_03210;Note=frameshifted;gbkey=CDS;gene=serB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015368376.1;locus_tag=J4731_03210;product=phosphoserine phosphatase;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	49600	50915	.	+	.	ID=gene-J4731_03215;Name=radA;gbkey=Gene;gene=radA;gene_biotype=pseudogene;locus_tag=J4731_03215;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	49600	50915	.	+	0	ID=cds-J4731_03215;Parent=gene-J4731_03215;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;gene=radA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001399683.1;locus_tag=J4731_03215;product=DNA repair protein RadA;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	50945	52171	.	+	.	ID=gene-J4731_03220;Name=nadR;gbkey=Gene;gene=nadR;gene_biotype=pseudogene;locus_tag=J4731_03220;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	50945	52171	.	+	0	ID=cds-J4731_03220;Parent=gene-J4731_03220;Note=frameshifted%3B internal stop;gbkey=CDS;gene=nadR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004926682.1;locus_tag=J4731_03220;product=multifunctional transcriptional regulator/nicotinamide-nucleotide adenylyltransferase/ribosylnicotinamide kinase NadR;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	52351	53972	.	-	.	ID=gene-J4731_03225;Name=ettA;gbkey=Gene;gene=ettA;gene_biotype=pseudogene;locus_tag=J4731_03225;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	52351	53972	.	-	0	ID=cds-J4731_03225;Parent=gene-J4731_03225;Note=frameshifted%3B internal stop;gbkey=CDS;gene=ettA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017145039.1;locus_tag=J4731_03225;product=energy-dependent translational throttle protein EttA;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	54192	54461	.	+	.	ID=gene-J4731_03230;Name=J4731_03230;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_03230;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	54192	54461	.	+	0	ID=cds-J4731_03230;Parent=gene-J4731_03230;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011145234.1;locus_tag=J4731_03230;product=type II toxin-antitoxin system RelE/ParE family toxin;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	54476	54777	.	+	.	ID=gene-J4731_03235;Name=J4731_03235;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_03235;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	54476	54777	.	+	0	ID=cds-J4731_03235;Parent=gene-J4731_03235;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004905696.1;locus_tag=J4731_03235;product=HigA family addiction module antidote protein;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	55057	56955	.	+	.	ID=gene-J4731_03240;Name=sltY;gbkey=Gene;gene=sltY;gene_biotype=pseudogene;locus_tag=J4731_03240;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	55057	56955	.	+	0	ID=cds-J4731_03240;Parent=gene-J4731_03240;Note=frameshifted;gbkey=CDS;gene=sltY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006815871.1;locus_tag=J4731_03240;product=murein transglycosylase;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	57334	57647	.	+	.	ID=gene-J4731_03245;Name=trpR;gbkey=Gene;gene=trpR;gene_biotype=pseudogene;locus_tag=J4731_03245;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	57334	57647	.	+	0	ID=cds-J4731_03245;Parent=gene-J4731_03245;Note=frameshifted;gbkey=CDS;gene=trpR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012005129.1;locus_tag=J4731_03245;product=trp operon repressor;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	58012	58540	.	-	.	ID=gene-J4731_03250;Name=yjjX;gbkey=Gene;gene=yjjX;gene_biotype=pseudogene;locus_tag=J4731_03250;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	58012	58540	.	-	0	ID=cds-J4731_03250;Parent=gene-J4731_03250;Note=frameshifted;gbkey=CDS;gene=yjjX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004245230.1;locus_tag=J4731_03250;product=inosine/xanthosine triphosphatase;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	58593	59239	.	+	.	ID=gene-J4731_03255;Name=gpmB;gbkey=Gene;gene=gpmB;gene_biotype=pseudogene;locus_tag=J4731_03255;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	58593	59239	.	+	0	ID=cds-J4731_03255;Parent=gene-J4731_03255;Note=frameshifted;gbkey=CDS;gene=gpmB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006662821.1;locus_tag=J4731_03255;product=2%2C3-diphosphoglycerate-dependent phosphoglycerate mutase GpmB;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	59236	60191	.	-	.	ID=gene-J4731_03260;Name=robA;gbkey=Gene;gene=robA;gene_biotype=pseudogene;locus_tag=J4731_03260;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	59236	60191	.	-	0	ID=cds-J4731_03260;Parent=gene-J4731_03260;Note=frameshifted;gbkey=CDS;gene=robA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006815867.1;locus_tag=J4731_03260;product=MDR efflux pump AcrAB transcriptional activator RobA;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	60391	60857	.	+	.	ID=gene-J4731_03265;Name=creA;gbkey=Gene;gene=creA;gene_biotype=pseudogene;locus_tag=J4731_03265;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	60391	60857	.	+	0	ID=cds-J4731_03265;Parent=gene-J4731_03265;Note=frameshifted;gbkey=CDS;gene=creA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013183408.1;locus_tag=J4731_03265;product=protein CreA;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	gene	60929	61462	.	-	.	ID=gene-J4731_03270;Name=J4731_03270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_03270
JAGETS010000007.1	Protein Homology	CDS	60929	61462	.	-	0	ID=cds-MBO1928725.1;Parent=gene-J4731_03270;Dbxref=NCBI_GP:MBO1928725.1;Name=MBO1928725.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019371.1;locus_tag=J4731_03270;product=Abi family protein;protein_id=MBO1928725.1;transl_table=11
JAGETS010000007.1	Genbank	gene	61366	61668	.	-	.	ID=gene-J4731_03275;Name=J4731_03275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_03275
JAGETS010000007.1	Protein Homology	CDS	61366	61668	.	-	0	ID=cds-MBO1928726.1;Parent=gene-J4731_03275;Dbxref=NCBI_GP:MBO1928726.1;Name=MBO1928726.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019371.1;locus_tag=J4731_03275;product=Abi family protein;protein_id=MBO1928726.1;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	62141	62851	.	-	.	ID=gene-J4731_03280;Name=arcA;gbkey=Gene;gene=arcA;gene_biotype=pseudogene;locus_tag=J4731_03280;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	62141	62851	.	-	0	ID=cds-J4731_03280;Parent=gene-J4731_03280;Note=frameshifted;gbkey=CDS;gene=arcA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003621071.1;locus_tag=J4731_03280;product=two-component system response regulator ArcA;pseudo=true;transl_table=11
JAGETS010000007.1	cmsearch	sequence_feature	63934	64049	.	+	.	ID=id-JAGETS010000007.1:63934..64049;Dbxref=RFAM:RF00506;Note=Thr leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.1
JAGETS010000007.1	Genbank	pseudogene	64074	66525	.	+	.	ID=gene-J4731_03285;Name=thrA;gbkey=Gene;gene=thrA;gene_biotype=pseudogene;locus_tag=J4731_03285;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	64074	66525	.	+	0	ID=cds-J4731_03285;Parent=gene-J4731_03285;Note=frameshifted;gbkey=CDS;gene=thrA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124053.1;locus_tag=J4731_03285;product=bifunctional aspartate kinase/homoserine dehydrogenase I;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	66529	67450	.	+	.	ID=gene-J4731_03290;Name=thrB;gbkey=Gene;gene=thrB;gene_biotype=pseudogene;locus_tag=J4731_03290;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	66529	67450	.	+	0	ID=cds-J4731_03290;Parent=gene-J4731_03290;Note=frameshifted;gbkey=CDS;gene=thrB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002443990.1;locus_tag=J4731_03290;product=homoserine kinase;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	67454	68743	.	+	.	ID=gene-J4731_03295;Name=thrC;gbkey=Gene;gene=thrC;gene_biotype=pseudogene;locus_tag=J4731_03295;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	67454	68743	.	+	0	ID=cds-J4731_03295;Parent=gene-J4731_03295;Note=frameshifted;gbkey=CDS;gene=thrC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006815859.1;locus_tag=J4731_03295;product=threonine synthase;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	gene	68870	69052	.	-	.	ID=gene-J4731_03300;Name=J4731_03300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_03300
JAGETS010000007.1	GeneMarkS-2+	CDS	68870	69052	.	-	0	ID=cds-MBO1928727.1;Parent=gene-J4731_03300;Dbxref=NCBI_GP:MBO1928727.1;Name=MBO1928727.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_03300;product=hypothetical protein;protein_id=MBO1928727.1;transl_table=11
JAGETS010000007.1	Genbank	gene	69128	69526	.	-	.	ID=gene-J4731_03305;Name=J4731_03305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_03305
JAGETS010000007.1	GeneMarkS-2+	CDS	69128	69526	.	-	0	ID=cds-MBO1928728.1;Parent=gene-J4731_03305;Dbxref=NCBI_GP:MBO1928728.1;Name=MBO1928728.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_03305;product=hypothetical protein;protein_id=MBO1928728.1;transl_table=11
JAGETS010000007.1	Genbank	gene	69587	69817	.	-	.	ID=gene-J4731_03310;Name=J4731_03310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_03310
JAGETS010000007.1	GeneMarkS-2+	CDS	69587	69817	.	-	0	ID=cds-MBO1928729.1;Parent=gene-J4731_03310;Dbxref=NCBI_GP:MBO1928729.1;Name=MBO1928729.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_03310;product=hypothetical protein;protein_id=MBO1928729.1;transl_table=11
JAGETS010000007.1	Genbank	gene	71697	72110	.	-	.	ID=gene-J4731_03315;Name=J4731_03315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_03315
JAGETS010000007.1	Protein Homology	CDS	71697	72110	.	-	0	ID=cds-MBO1928730.1;Parent=gene-J4731_03315;Dbxref=NCBI_GP:MBO1928730.1;Name=MBO1928730.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012876.1;locus_tag=J4731_03315;product=HAMP domain-containing protein;protein_id=MBO1928730.1;transl_table=11
JAGETS010000007.1	Genbank	gene	72252	72491	.	-	.	ID=gene-J4731_03320;Name=J4731_03320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_03320
JAGETS010000007.1	GeneMarkS-2+	CDS	72252	72491	.	-	0	ID=cds-MBO1928731.1;Parent=gene-J4731_03320;Dbxref=NCBI_GP:MBO1928731.1;Name=MBO1928731.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_03320;product=hypothetical protein;protein_id=MBO1928731.1;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	72534	73211	.	-	.	ID=gene-J4731_03325;Name=J4731_03325;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_03325;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	72534	73211	.	-	0	ID=cds-J4731_03325;Parent=gene-J4731_03325;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004905666.1;locus_tag=J4731_03325;product=heavy metal response regulator transcription factor;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	73379	74735	.	+	.	ID=gene-J4731_03330;Name=J4731_03330;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_03330;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	73379	74735	.	+	0	ID=cds-J4731_03330;Parent=gene-J4731_03330;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004905665.1;locus_tag=J4731_03330;product=efflux transporter outer membrane subunit;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	74784	75082	.	+	.	ID=gene-J4731_03335;Name=J4731_03335;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_03335;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	74784	75082	.	+	0	ID=cds-J4731_03335;Parent=gene-J4731_03335;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004905664.1;locus_tag=J4731_03335;product=copper-binding protein;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	75100	76356	.	+	.	ID=gene-J4731_03340;Name=J4731_03340;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_03340;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	75100	76356	.	+	0	ID=cds-J4731_03340;Parent=gene-J4731_03340;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004905663.1;locus_tag=J4731_03340;product=efflux RND transporter periplasmic adaptor subunit;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	76360	79494	.	+	.	ID=gene-J4731_03345;Name=J4731_03345;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_03345;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	76360	79494	.	+	0	ID=cds-J4731_03345;Parent=gene-J4731_03345;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000573961.1;locus_tag=J4731_03345;product=CusA/CzcA family heavy metal efflux RND transporter;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	79509	79925	.	+	.	ID=gene-J4731_03350;Name=J4731_03350;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_03350;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	79509	79925	.	+	0	ID=cds-J4731_03350;Parent=gene-J4731_03350;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004905661.1;locus_tag=J4731_03350;product=metal-binding protein;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	80025	80956	.	-	.	ID=gene-J4731_03355;Name=J4731_03355;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_03355;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	80025	80956	.	-	0	ID=cds-J4731_03355;Parent=gene-J4731_03355;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004926737.1;locus_tag=J4731_03355;product=aldo/keto reductase;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	81146	81918	.	-	.	ID=gene-J4731_03360;Name=yaaA;gbkey=Gene;gene=yaaA;gene_biotype=pseudogene;locus_tag=J4731_03360;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	81146	81918	.	-	0	ID=cds-J4731_03360;Parent=gene-J4731_03360;Note=frameshifted;gbkey=CDS;gene=yaaA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006657137.1;locus_tag=J4731_03360;product=peroxide stress protein YaaA;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	82304	83227	.	+	.	ID=gene-J4731_03365;Name=tal;gbkey=Gene;gene=tal;gene_biotype=pseudogene;locus_tag=J4731_03365;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	82304	83227	.	+	0	ID=cds-J4731_03365;Parent=gene-J4731_03365;Note=frameshifted;gbkey=CDS;gene=tal;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000130186.1;locus_tag=J4731_03365;product=transaldolase;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	gene	83438	84019	.	+	.	ID=gene-J4731_03370;Name=mog;gbkey=Gene;gene=mog;gene_biotype=protein_coding;locus_tag=J4731_03370
JAGETS010000007.1	Protein Homology	CDS	83438	84019	.	+	0	ID=cds-MBO1928732.1;Parent=gene-J4731_03370;Dbxref=NCBI_GP:MBO1928732.1;Name=MBO1928732.1;gbkey=CDS;gene=mog;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004926746.1;locus_tag=J4731_03370;product=molybdopterin adenylyltransferase;protein_id=MBO1928732.1;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	84098	84658	.	-	.	ID=gene-J4731_03375;Name=satP;gbkey=Gene;gene=satP;gene_biotype=pseudogene;locus_tag=J4731_03375;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	84098	84658	.	-	0	ID=cds-J4731_03375;Parent=gene-J4731_03375;Note=frameshifted;gbkey=CDS;gene=satP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011095381.1;locus_tag=J4731_03375;product=acetate uptake transporter;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	84992	86936	.	+	.	ID=gene-J4731_03380;Name=dnaK;gbkey=Gene;gene=dnaK;gene_biotype=pseudogene;locus_tag=J4731_03380;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	84992	86936	.	+	0	ID=cds-J4731_03380;Parent=gene-J4731_03380;Note=frameshifted;gbkey=CDS;gene=dnaK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000516136.1;locus_tag=J4731_03380;product=molecular chaperone DnaK;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	87007	88136	.	+	.	ID=gene-J4731_03385;Name=dnaJ;gbkey=Gene;gene=dnaJ;gene_biotype=pseudogene;locus_tag=J4731_03385;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	87007	88136	.	+	0	ID=cds-J4731_03385;Parent=gene-J4731_03385;Note=frameshifted;gbkey=CDS;gene=dnaJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004926754.1;locus_tag=J4731_03385;product=molecular chaperone DnaJ;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	88202	89599	.	-	.	ID=gene-J4731_03390;Name=J4731_03390;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_03390;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	88202	89599	.	-	0	ID=cds-J4731_03390;Parent=gene-J4731_03390;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008911176.1;locus_tag=J4731_03390;product=amidohydrolase;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	89721	90566	.	-	.	ID=gene-J4731_03395;Name=J4731_03395;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_03395;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	89721	90566	.	-	0	ID=cds-J4731_03395;Parent=gene-J4731_03395;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004926757.1;locus_tag=J4731_03395;product=EamA family transporter;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	90953	92124	.	+	.	ID=gene-J4731_03400;Name=nhaA;gbkey=Gene;gene=nhaA;gene_biotype=pseudogene;locus_tag=J4731_03400;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	90953	92124	.	+	0	ID=cds-J4731_03400;Parent=gene-J4731_03400;Note=frameshifted;gbkey=CDS;gene=nhaA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005166980.1;locus_tag=J4731_03400;product=Na+/H+ antiporter NhaA;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	92313	93226	.	+	.	ID=gene-J4731_03405;Name=nhaR;gbkey=Gene;gene=nhaR;gene_biotype=pseudogene;locus_tag=J4731_03405;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	92313	93226	.	+	0	ID=cds-J4731_03405;Parent=gene-J4731_03405;Note=frameshifted%3B internal stop;gbkey=CDS;gene=nhaR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006815843.1;locus_tag=J4731_03405;product=transcriptional activator NhaR;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	93279	93538	.	-	.	ID=gene-J4731_03410;Name=rpsT;gbkey=Gene;gene=rpsT;gene_biotype=pseudogene;locus_tag=J4731_03410;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	93279	93538	.	-	0	ID=cds-J4731_03410;Parent=gene-J4731_03410;Note=frameshifted;gbkey=CDS;gene=rpsT;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019080555.1;locus_tag=J4731_03410;product=30S ribosomal protein S20;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	94124	95020	.	+	.	ID=gene-J4731_03415;Name=ribF;gbkey=Gene;gene=ribF;gene_biotype=pseudogene;locus_tag=J4731_03415;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	94124	95020	.	+	0	ID=cds-J4731_03415;Parent=gene-J4731_03415;Note=frameshifted;gbkey=CDS;gene=ribF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010846288.1;locus_tag=J4731_03415;product=bifunctional riboflavin kinase/FAD synthetase;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	95060	97786	.	+	.	ID=gene-J4731_03420;Name=ileS;gbkey=Gene;gene=ileS;gene_biotype=pseudogene;locus_tag=J4731_03420;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	95060	97786	.	+	0	ID=cds-J4731_03420;Parent=gene-J4731_03420;Note=frameshifted%3B internal stop;gbkey=CDS;gene=ileS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012440460.1;locus_tag=J4731_03420;product=isoleucine--tRNA ligase;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	97786	98297	.	+	.	ID=gene-J4731_03425;Name=lspA;gbkey=Gene;gene=lspA;gene_biotype=pseudogene;locus_tag=J4731_03425;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	97786	98297	.	+	0	ID=cds-J4731_03425;Parent=gene-J4731_03425;Note=frameshifted;gbkey=CDS;gene=lspA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014656811.1;locus_tag=J4731_03425;product=signal peptidase II;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	98364	98832	.	+	.	ID=gene-J4731_03430;Name=fkpB;gbkey=Gene;gene=fkpB;gene_biotype=pseudogene;locus_tag=J4731_03430;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	98364	98832	.	+	0	ID=cds-J4731_03430;Parent=gene-J4731_03430;Note=frameshifted;gbkey=CDS;gene=fkpB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008913307.1;locus_tag=J4731_03430;product=FKBP-type peptidyl-prolyl cis-trans isomerase;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	98813	99768	.	+	.	ID=gene-J4731_03435;Name=ispH;gbkey=Gene;gene=ispH;gene_biotype=pseudogene;gene_synonym=lytB;locus_tag=J4731_03435;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	98813	99768	.	+	0	ID=cds-J4731_03435;Parent=gene-J4731_03435;Note=frameshifted;gbkey=CDS;gene=ispH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013811452.1;locus_tag=J4731_03435;product=4-hydroxy-3-methylbut-2-enyl diphosphate reductase;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	100035	100834	.	+	.	ID=gene-J4731_03440;Name=dapB;gbkey=Gene;gene=dapB;gene_biotype=pseudogene;locus_tag=J4731_03440;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	100035	100834	.	+	0	ID=cds-J4731_03440;Parent=gene-J4731_03440;Note=frameshifted;gbkey=CDS;gene=dapB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012886213.1;locus_tag=J4731_03440;product=4-hydroxy-tetrahydrodipicolinate reductase;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	101278	102436	.	+	.	ID=gene-J4731_03445;Name=carA;gbkey=Gene;gene=carA;gene_biotype=pseudogene;locus_tag=J4731_03445;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	101278	102436	.	+	0	ID=cds-J4731_03445;Parent=gene-J4731_03445;Note=frameshifted;gbkey=CDS;gene=carA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014656798.1;locus_tag=J4731_03445;product=glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	102450	105635	.	+	.	ID=gene-J4731_03450;Name=carB;gbkey=Gene;gene=carB;gene_biotype=pseudogene;locus_tag=J4731_03450;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	102450	105635	.	+	0	ID=cds-J4731_03450;Parent=gene-J4731_03450;Note=frameshifted%3B internal stop;gbkey=CDS;gene=carB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459072.1;locus_tag=J4731_03450;product=carbamoyl-phosphate synthase large subunit;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	105828	106845	.	+	.	ID=gene-J4731_03455;Name=J4731_03455;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_03455;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	105828	106845	.	+	0	ID=cds-J4731_03455;Parent=gene-J4731_03455;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004248926.1;locus_tag=J4731_03455;product=MerR family transcriptional regulator;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	106932	107526	.	-	.	ID=gene-J4731_03460;Name=J4731_03460;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_03460;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	106932	107526	.	-	0	ID=cds-J4731_03460;Parent=gene-J4731_03460;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000268419.1;locus_tag=J4731_03460;product=DedA family protein;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	107772	108834	.	-	.	ID=gene-J4731_03465;Name=metC;gbkey=Gene;gene=metC;gene_biotype=pseudogene;locus_tag=J4731_03465;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	107772	108834	.	-	0	ID=cds-J4731_03465;Parent=gene-J4731_03465;Note=frameshifted;gbkey=CDS;gene=metC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004390105.1;locus_tag=J4731_03465;product=cystathionine beta-lyase;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	gene	109240	109545	.	+	.	ID=gene-J4731_03470;Name=J4731_03470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_03470
JAGETS010000007.1	GeneMarkS-2+	CDS	109240	109545	.	+	0	ID=cds-MBO1928733.1;Parent=gene-J4731_03470;Dbxref=NCBI_GP:MBO1928733.1;Name=MBO1928733.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_03470;product=hypothetical protein;protein_id=MBO1928733.1;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	109561	110174	.	+	.	ID=gene-J4731_03475;Name=exbB;gbkey=Gene;gene=exbB;gene_biotype=pseudogene;locus_tag=J4731_03475;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	109561	110174	.	+	0	ID=cds-J4731_03475;Parent=gene-J4731_03475;Note=frameshifted;gbkey=CDS;gene=exbB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002385240.1;locus_tag=J4731_03475;product=tonB-system energizer ExbB;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	110180	110597	.	+	.	ID=gene-J4731_03480;Name=exbD;gbkey=Gene;gene=exbD;gene_biotype=pseudogene;locus_tag=J4731_03480;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	110180	110597	.	+	0	ID=cds-J4731_03480;Parent=gene-J4731_03480;Note=frameshifted%3B internal stop;gbkey=CDS;gene=exbD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006657163.1;locus_tag=J4731_03480;product=TonB system transport protein ExbD;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	112099	113262	.	+	.	ID=gene-J4731_03485;Name=yedE;gbkey=Gene;gene=yedE;gene_biotype=pseudogene;locus_tag=J4731_03485;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	112099	113262	.	+	0	ID=cds-J4731_03485;Parent=gene-J4731_03485;Note=frameshifted;gbkey=CDS;gene=yedE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004093721.1;locus_tag=J4731_03485;product=selenium metabolism membrane protein YedE/FdhT;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	113301	113589	.	+	.	ID=gene-J4731_03490;Name=yedF;gbkey=Gene;gene=yedF;gene_biotype=pseudogene;locus_tag=J4731_03490;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	113301	113589	.	+	0	ID=cds-J4731_03490;Parent=gene-J4731_03490;Note=frameshifted;gbkey=CDS;gene=yedF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004926886.1;locus_tag=J4731_03490;product=sulfurtransferase-like selenium metabolism protein YedF;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	113963	114469	.	-	.	ID=gene-J4731_03495;Name=J4731_03495;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_03495;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	113963	114469	.	-	0	ID=cds-J4731_03495;Parent=gene-J4731_03495;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004905596.1;locus_tag=J4731_03495;product=GNAT family N-acetyltransferase;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	114695	115572	.	-	.	ID=gene-J4731_03500;Name=rdgC;gbkey=Gene;gene=rdgC;gene_biotype=pseudogene;locus_tag=J4731_03500;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	114695	115572	.	-	0	ID=cds-J4731_03500;Parent=gene-J4731_03500;Note=frameshifted;gbkey=CDS;gene=rdgC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014656792.1;locus_tag=J4731_03500;product=recombination-associated protein RdgC;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	115773	116656	.	+	.	ID=gene-J4731_03505;Name=mak;gbkey=Gene;gene=mak;gene_biotype=pseudogene;locus_tag=J4731_03505;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	115773	116656	.	+	0	ID=cds-J4731_03505;Parent=gene-J4731_03505;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;gene=mak;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004236409.1;locus_tag=J4731_03505;product=fructokinase;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	117551	119492	.	+	.	ID=gene-J4731_03510;Name=J4731_03510;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_03510;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	117551	119492	.	+	0	ID=cds-J4731_03510;Parent=gene-J4731_03510;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006657169.1;locus_tag=J4731_03510;product=bifunctional 2'%2C3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	120383	120979	.	-	.	ID=gene-J4731_03515;Name=J4731_03515;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_03515;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	120383	120979	.	-	0	ID=cds-J4731_03515;Parent=gene-J4731_03515;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014094008.1;locus_tag=J4731_03515;product=nitroreductase family protein;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	121331	122189	.	-	.	ID=gene-J4731_03520;Name=J4731_03520;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_03520;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	121331	122189	.	-	0	ID=cds-J4731_03520;Parent=gene-J4731_03520;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004905584.1;locus_tag=J4731_03520;product=NLPA lipoprotein;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	gene	122633	122866	.	+	.	ID=gene-J4731_03525;Name=J4731_03525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_03525
JAGETS010000007.1	Protein Homology	CDS	122633	122866	.	+	0	ID=cds-MBO1928734.1;Parent=gene-J4731_03525;Dbxref=NCBI_GP:MBO1928734.1;Name=MBO1928734.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025587.1;locus_tag=J4731_03525;product=hypothetical protein;protein_id=MBO1928734.1;transl_table=11
JAGETS010000007.1	Genbank	gene	122848	123273	.	+	.	ID=gene-J4731_03530;Name=J4731_03530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_03530
JAGETS010000007.1	Protein Homology	CDS	122848	123273	.	+	0	ID=cds-MBO1928735.1;Parent=gene-J4731_03530;Dbxref=NCBI_GP:MBO1928735.1;Name=MBO1928735.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015150.1;locus_tag=J4731_03530;product=isopenicillin N synthase family oxygenase;protein_id=MBO1928735.1;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	123559	124734	.	+	.	ID=gene-J4731_03535;Name=J4731_03535;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_03535;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	123559	124734	.	+	0	ID=cds-J4731_03535;Parent=gene-J4731_03535;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004248059.1;locus_tag=J4731_03535;product=cystathionine gamma-synthase family protein;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	124811	125728	.	-	.	ID=gene-J4731_03540;Name=J4731_03540;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_03540;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	124811	125728	.	-	0	ID=cds-J4731_03540;Parent=gene-J4731_03540;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012229916.1;locus_tag=J4731_03540;product=hypothetical protein;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	gene	125641	125859	.	-	.	ID=gene-J4731_03545;Name=J4731_03545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_03545
JAGETS010000007.1	GeneMarkS-2+	CDS	125641	125859	.	-	0	ID=cds-MBO1928736.1;Parent=gene-J4731_03545;Dbxref=NCBI_GP:MBO1928736.1;Name=MBO1928736.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_03545;product=hypothetical protein;protein_id=MBO1928736.1;transl_table=11
JAGETS010000007.1	Genbank	gene	125913	126059	.	-	.	ID=gene-J4731_03550;Name=J4731_03550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_03550
JAGETS010000007.1	GeneMarkS-2+	CDS	125913	126059	.	-	0	ID=cds-MBO1928737.1;Parent=gene-J4731_03550;Dbxref=NCBI_GP:MBO1928737.1;Name=MBO1928737.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_03550;product=hypothetical protein;protein_id=MBO1928737.1;transl_table=11
JAGETS010000007.1	Genbank	gene	126205	126354	.	-	.	ID=gene-J4731_03555;Name=J4731_03555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_03555
JAGETS010000007.1	GeneMarkS-2+	CDS	126205	126354	.	-	0	ID=cds-MBO1928738.1;Parent=gene-J4731_03555;Dbxref=NCBI_GP:MBO1928738.1;Name=MBO1928738.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_03555;product=hypothetical protein;protein_id=MBO1928738.1;transl_table=11
JAGETS010000007.1	Genbank	gene	126608	126826	.	-	.	ID=gene-J4731_03560;Name=J4731_03560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_03560
JAGETS010000007.1	GeneMarkS-2+	CDS	126608	126826	.	-	0	ID=cds-MBO1928739.1;Parent=gene-J4731_03560;Dbxref=NCBI_GP:MBO1928739.1;Name=MBO1928739.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_03560;product=hypothetical protein;protein_id=MBO1928739.1;transl_table=11
JAGETS010000007.1	Genbank	gene	127270	127434	.	-	.	ID=gene-J4731_03565;Name=J4731_03565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_03565
JAGETS010000007.1	GeneMarkS-2+	CDS	127270	127434	.	-	0	ID=cds-MBO1928740.1;Parent=gene-J4731_03565;Dbxref=NCBI_GP:MBO1928740.1;Name=MBO1928740.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_03565;product=hypothetical protein;protein_id=MBO1928740.1;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	127431	128485	.	-	.	ID=gene-J4731_03570;Name=J4731_03570;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_03570;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	127431	128485	.	-	0	ID=cds-J4731_03570;Parent=gene-J4731_03570;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414931.1;locus_tag=J4731_03570;product=AAA family ATPase;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	128487	129690	.	-	.	ID=gene-J4731_03575;Name=sbcD;gbkey=Gene;gene=sbcD;gene_biotype=pseudogene;locus_tag=J4731_03575;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	128487	129690	.	-	0	ID=cds-J4731_03575;Parent=gene-J4731_03575;Note=frameshifted;gbkey=CDS;gene=sbcD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004905574.1;locus_tag=J4731_03575;product=exonuclease subunit SbcD;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	129940	130623	.	+	.	ID=gene-J4731_03580;Name=phoB;gbkey=Gene;gene=phoB;gene_biotype=pseudogene;locus_tag=J4731_03580;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	129940	130623	.	+	0	ID=cds-J4731_03580;Parent=gene-J4731_03580;Note=frameshifted;gbkey=CDS;gene=phoB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000113934.1;locus_tag=J4731_03580;product=phosphate regulon transcriptional regulator PhoB;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	130647	131956	.	+	.	ID=gene-J4731_03585;Name=phoR;gbkey=Gene;gene=phoR;gene_biotype=pseudogene;locus_tag=J4731_03585;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	130647	131956	.	+	0	ID=cds-J4731_03585;Parent=gene-J4731_03585;Note=frameshifted;gbkey=CDS;gene=phoR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004905567.1;locus_tag=J4731_03585;product=phosphate regulon sensor histidine kinase PhoR;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	132423	133742	.	+	.	ID=gene-J4731_03590;Name=brnQ;gbkey=Gene;gene=brnQ;gene_biotype=pseudogene;locus_tag=J4731_03590;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	132423	133742	.	+	0	ID=cds-J4731_03590;Parent=gene-J4731_03590;Note=frameshifted;gbkey=CDS;gene=brnQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004245159.1;locus_tag=J4731_03590;product=branched-chain amino acid transport system II carrier protein;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	133798	135555	.	-	.	ID=gene-J4731_03595;Name=ggt;gbkey=Gene;gene=ggt;gene_biotype=pseudogene;locus_tag=J4731_03595;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	133798	135555	.	-	0	ID=cds-J4731_03595;Parent=gene-J4731_03595;Note=frameshifted;gbkey=CDS;gene=ggt;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006657177.1;locus_tag=J4731_03595;product=gamma-glutamyltransferase;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	135792	136393	.	-	.	ID=gene-J4731_03600;Name=J4731_03600;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_03600;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	135792	136393	.	-	0	ID=cds-J4731_03600;Parent=gene-J4731_03600;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225393.1;locus_tag=J4731_03600;product=peroxiredoxin C;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	136605	137211	.	-	.	ID=gene-J4731_03605;Name=J4731_03605;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_03605;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	136605	137211	.	-	0	ID=cds-J4731_03605;Parent=gene-J4731_03605;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014656782.1;locus_tag=J4731_03605;product=DUF479 domain-containing protein;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	137577	138642	.	+	.	ID=gene-J4731_03610;Name=queA;gbkey=Gene;gene=queA;gene_biotype=pseudogene;locus_tag=J4731_03610;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	137577	138642	.	+	0	ID=cds-J4731_03610;Parent=gene-J4731_03610;Note=frameshifted;gbkey=CDS;gene=queA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004252586.1;locus_tag=J4731_03610;product=tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	138817	139854	.	+	.	ID=gene-J4731_03615;Name=tgt;gbkey=Gene;gene=tgt;gene_biotype=pseudogene;locus_tag=J4731_03615;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	138817	139854	.	+	0	ID=cds-J4731_03615;Parent=gene-J4731_03615;Note=frameshifted;gbkey=CDS;gene=tgt;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014593060.1;locus_tag=J4731_03615;product=tRNA guanosine(34) transglycosylase Tgt;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	139947	140276	.	+	.	ID=gene-J4731_03620;Name=yajC;gbkey=Gene;gene=yajC;gene_biotype=pseudogene;locus_tag=J4731_03620;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	139947	140276	.	+	0	ID=cds-J4731_03620;Parent=gene-J4731_03620;Note=frameshifted;gbkey=CDS;gene=yajC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005166605.1;locus_tag=J4731_03620;product=preprotein translocase subunit YajC;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	140302	142124	.	+	.	ID=gene-J4731_03625;Name=secD;gbkey=Gene;gene=secD;gene_biotype=pseudogene;locus_tag=J4731_03625;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	140302	142124	.	+	0	ID=cds-J4731_03625;Parent=gene-J4731_03625;Note=frameshifted%3B internal stop;gbkey=CDS;gene=secD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005125127.1;locus_tag=J4731_03625;product=protein translocase subunit SecD;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	142135	143101	.	+	.	ID=gene-J4731_03630;Name=secF;gbkey=Gene;gene=secF;gene_biotype=pseudogene;locus_tag=J4731_03630;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	142135	143101	.	+	0	ID=cds-J4731_03630;Parent=gene-J4731_03630;Note=frameshifted;gbkey=CDS;gene=secF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013649437.1;locus_tag=J4731_03630;product=protein translocase subunit SecF;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	143311	143756	.	+	.	ID=gene-J4731_03635;Name=nrdR;gbkey=Gene;gene=nrdR;gene_biotype=pseudogene;locus_tag=J4731_03635;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	143311	143756	.	+	0	ID=cds-J4731_03635;Parent=gene-J4731_03635;Note=frameshifted;gbkey=CDS;gene=nrdR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017458860.1;locus_tag=J4731_03635;product=transcriptional regulator NrdR;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	143762	144871	.	+	.	ID=gene-J4731_03640;Name=ribD;gbkey=Gene;gene=ribD;gene_biotype=pseudogene;locus_tag=J4731_03640;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	143762	144871	.	+	0	ID=cds-J4731_03640;Parent=gene-J4731_03640;Note=frameshifted;gbkey=CDS;gene=ribD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006657187.1;locus_tag=J4731_03640;product=bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	gene	144953	145426	.	+	.	ID=gene-J4731_03645;Name=ribE;gbkey=Gene;gene=ribE;gene_biotype=protein_coding;locus_tag=J4731_03645
JAGETS010000007.1	Protein Homology	CDS	144953	145426	.	+	0	ID=cds-MBO1928741.1;Parent=gene-J4731_03645;Dbxref=NCBI_GP:MBO1928741.1;Name=MBO1928741.1;gbkey=CDS;gene=ribE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006657188.1;locus_tag=J4731_03645;product=6%2C7-dimethyl-8-ribityllumazine synthase;protein_id=MBO1928741.1;transl_table=11
JAGETS010000007.1	Genbank	gene	145528	145986	.	+	.	ID=gene-J4731_03650;Name=nusB;gbkey=Gene;gene=nusB;gene_biotype=protein_coding;locus_tag=J4731_03650
JAGETS010000007.1	Protein Homology	CDS	145528	145986	.	+	0	ID=cds-MBO1928742.1;Parent=gene-J4731_03650;Dbxref=NCBI_GP:MBO1928742.1;Name=MBO1928742.1;gbkey=CDS;gene=nusB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004245136.1;locus_tag=J4731_03650;product=transcription antitermination factor NusB;protein_id=MBO1928742.1;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	146183	147158	.	+	.	ID=gene-J4731_03655;Name=thiL;gbkey=Gene;gene=thiL;gene_biotype=pseudogene;locus_tag=J4731_03655;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	146183	147158	.	+	0	ID=cds-J4731_03655;Parent=gene-J4731_03655;Note=frameshifted;gbkey=CDS;gene=thiL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208664.1;locus_tag=J4731_03655;product=thiamine-phosphate kinase;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	147204	147552	.	+	.	ID=gene-J4731_03660;Name=J4731_03660;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_03660;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	147204	147552	.	+	0	ID=cds-J4731_03660;Parent=gene-J4731_03660;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004387751.1;locus_tag=J4731_03660;product=phosphatidylglycerophosphatase A;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	148109	149399	.	-	.	ID=gene-J4731_03665;Name=J4731_03665;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_03665;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	148109	149399	.	-	0	ID=cds-J4731_03665;Parent=gene-J4731_03665;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459084.1;locus_tag=J4731_03665;product=MFS transporter;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	149469	149752	.	-	.	ID=gene-J4731_03670;Name=fixX;gbkey=Gene;gene=fixX;gene_biotype=pseudogene;locus_tag=J4731_03670;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	149469	149752	.	-	0	ID=cds-J4731_03670;Parent=gene-J4731_03670;Note=frameshifted;gbkey=CDS;gene=fixX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706000.1;locus_tag=J4731_03670;product=ferredoxin-like protein FixX;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	149749	151021	.	-	.	ID=gene-J4731_03675;Name=J4731_03675;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_03675;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	149749	151021	.	-	0	ID=cds-J4731_03675;Parent=gene-J4731_03675;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459082.1;locus_tag=J4731_03675;product=FAD-dependent oxidoreductase;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	151076	152005	.	-	.	ID=gene-J4731_03680;Name=J4731_03680;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_03680;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	151076	152005	.	-	0	ID=cds-J4731_03680;Parent=gene-J4731_03680;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004905511.1;locus_tag=J4731_03680;product=FAD-binding protein;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	151974	152766	.	-	.	ID=gene-J4731_03685;Name=fixA;gbkey=Gene;gene=fixA;gene_biotype=pseudogene;locus_tag=J4731_03685;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	151974	152766	.	-	0	ID=cds-J4731_03685;Parent=gene-J4731_03685;Note=frameshifted%3B internal stop;gbkey=CDS;gene=fixA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006819755.1;locus_tag=J4731_03685;product=putative electron transfer flavoprotein FixA;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	153323	154786	.	+	.	ID=gene-J4731_03690;Name=caiT;gbkey=Gene;gene=caiT;gene_biotype=pseudogene;locus_tag=J4731_03690;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	153323	154786	.	+	0	ID=cds-J4731_03690;Parent=gene-J4731_03690;Note=frameshifted%3B internal stop;gbkey=CDS;gene=caiT;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002464137.1;locus_tag=J4731_03690;product=L-carnitine/gamma-butyrobetaine antiport BCCT transporter;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	154821	155961	.	+	.	ID=gene-J4731_03695;Name=caiA;gbkey=Gene;gene=caiA;gene_biotype=pseudogene;locus_tag=J4731_03695;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	154821	155961	.	+	0	ID=cds-J4731_03695;Parent=gene-J4731_03695;Note=frameshifted;gbkey=CDS;gene=caiA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124373.1;locus_tag=J4731_03695;product=crotonobetainyl-CoA dehydrogenase;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	156025	157206	.	+	.	ID=gene-J4731_03700;Name=caiB;gbkey=Gene;gene=caiB;gene_biotype=pseudogene;locus_tag=J4731_03700;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	156025	157206	.	+	0	ID=cds-J4731_03700;Parent=gene-J4731_03700;Note=frameshifted;gbkey=CDS;gene=caiB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001542749.1;locus_tag=J4731_03700;product=L-carnitine CoA-transferase;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	157310	158815	.	+	.	ID=gene-J4731_03705;Name=caiC;gbkey=Gene;gene=caiC;gene_biotype=pseudogene;locus_tag=J4731_03705;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	157310	158815	.	+	0	ID=cds-J4731_03705;Parent=gene-J4731_03705;Note=frameshifted%3B internal stop;gbkey=CDS;gene=caiC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012368455.1;locus_tag=J4731_03705;product=crotonobetaine/carnitine-CoA ligase;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	158916	159693	.	+	.	ID=gene-J4731_03710;Name=caiD;gbkey=Gene;gene=caiD;gene_biotype=pseudogene;locus_tag=J4731_03710;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	158916	159693	.	+	0	ID=cds-J4731_03710;Parent=gene-J4731_03710;Note=frameshifted;gbkey=CDS;gene=caiD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414578.2;locus_tag=J4731_03710;product=crotonobetainyl-CoA hydratase;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	159741	160309	.	+	.	ID=gene-J4731_03715;Name=caiE;gbkey=Gene;gene=caiE;gene_biotype=pseudogene;locus_tag=J4731_03715;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	159741	160309	.	+	0	ID=cds-J4731_03715;Parent=gene-J4731_03715;Note=frameshifted;gbkey=CDS;gene=caiE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008805114.1;locus_tag=J4731_03715;product=carnitine operon protein CaiE;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	161366	163170	.	-	.	ID=gene-J4731_03720;Name=dxs;gbkey=Gene;gene=dxs;gene_biotype=pseudogene;locus_tag=J4731_03720;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	161366	163170	.	-	0	ID=cds-J4731_03720;Parent=gene-J4731_03720;Note=frameshifted%3B internal stop;gbkey=CDS;gene=dxs;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012988161.1;locus_tag=J4731_03720;product=1-deoxy-D-xylulose-5-phosphate synthase;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	163372	164301	.	-	.	ID=gene-J4731_03725;Name=ispA;gbkey=Gene;gene=ispA;gene_biotype=pseudogene;locus_tag=J4731_03725;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	163372	164301	.	-	0	ID=cds-J4731_03725;Parent=gene-J4731_03725;Note=frameshifted;gbkey=CDS;gene=ispA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008913357.1;locus_tag=J4731_03725;product=(2E%2C6E)-farnesyl diphosphate synthase;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	164283	164485	.	-	.	ID=gene-J4731_03730;Name=xseB;gbkey=Gene;gene=xseB;gene_biotype=pseudogene;locus_tag=J4731_03730;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	164283	164485	.	-	0	ID=cds-J4731_03730;Parent=gene-J4731_03730;Note=frameshifted;gbkey=CDS;gene=xseB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008814283.1;locus_tag=J4731_03730;product=exodeoxyribonuclease VII small subunit;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	164763	166194	.	+	.	ID=gene-J4731_03735;Name=thiI;gbkey=Gene;gene=thiI;gene_biotype=pseudogene;locus_tag=J4731_03735;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	164763	166194	.	+	0	ID=cds-J4731_03735;Parent=gene-J4731_03735;Note=frameshifted%3B internal stop;gbkey=CDS;gene=thiI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015835554.1;locus_tag=J4731_03735;product=tRNA 4-thiouridine(8) synthase ThiI;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	gene	166258	166401	.	-	.	ID=gene-J4731_03740;Name=J4731_03740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_03740
JAGETS010000007.1	Protein Homology	CDS	166258	166401	.	-	0	ID=cds-MBO1928743.1;Parent=gene-J4731_03740;Dbxref=NCBI_GP:MBO1928743.1;Name=MBO1928743.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004905468.1;locus_tag=J4731_03740;product=type I toxin-antitoxin system Hok family toxin;protein_id=MBO1928743.1;transl_table=11
JAGETS010000007.1	Genbank	gene	166781	166918	.	-	.	ID=gene-J4731_03745;Name=J4731_03745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_03745
JAGETS010000007.1	Protein Homology	CDS	166781	166918	.	-	0	ID=cds-MBO1928744.1;Parent=gene-J4731_03745;Dbxref=NCBI_GP:MBO1928744.1;Name=MBO1928744.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001300273.1;locus_tag=J4731_03745;product=Hok/Gef family protein;protein_id=MBO1928744.1;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	167165	167752	.	-	.	ID=gene-J4731_03750;Name=yajL;gbkey=Gene;gene=yajL;gene_biotype=pseudogene;locus_tag=J4731_03750;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	167165	167752	.	-	0	ID=cds-J4731_03750;Parent=gene-J4731_03750;Note=frameshifted;gbkey=CDS;gene=yajL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004905467.1;locus_tag=J4731_03750;product=protein deglycase YajL;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	167718	168611	.	-	.	ID=gene-J4731_03755;Name=panE;gbkey=Gene;gene=panE;gene_biotype=pseudogene;locus_tag=J4731_03755;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	167718	168611	.	-	0	ID=cds-J4731_03755;Parent=gene-J4731_03755;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;gene=panE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006662776.1;locus_tag=J4731_03755;product=2-dehydropantoate 2-reductase;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	168797	169284	.	+	.	ID=gene-J4731_03760;Name=J4731_03760;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_03760;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	168797	169284	.	+	0	ID=cds-J4731_03760;Parent=gene-J4731_03760;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001138904.1;locus_tag=J4731_03760;product=YajQ family cyclic di-GMP-binding protein;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	169341	170663	.	-	.	ID=gene-J4731_03765;Name=J4731_03765;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_03765;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	169341	170663	.	-	0	ID=cds-J4731_03765;Parent=gene-J4731_03765;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308508.2;locus_tag=J4731_03765;product=MFS transporter;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	170974	171860	.	-	.	ID=gene-J4731_03770;Name=cyoE;gbkey=Gene;gene=cyoE;gene_biotype=pseudogene;locus_tag=J4731_03770;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	170974	171860	.	-	0	ID=cds-J4731_03770;Parent=gene-J4731_03770;Note=frameshifted;gbkey=CDS;gene=cyoE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225430.1;locus_tag=J4731_03770;product=heme o synthase;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	gene	171873	172205	.	-	.	ID=gene-J4731_03775;Name=J4731_03775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_03775
JAGETS010000007.1	Protein Homology	CDS	171873	172205	.	-	0	ID=cds-MBO1928745.1;Parent=gene-J4731_03775;Dbxref=NCBI_GP:MBO1928745.1;Name=MBO1928745.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208652.1;locus_tag=J4731_03775;product=cytochrome o ubiquinol oxidase subunit IV;protein_id=MBO1928745.1;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	172202	172763	.	-	.	ID=gene-J4731_03780;Name=cyoC;gbkey=Gene;gene=cyoC;gene_biotype=pseudogene;locus_tag=J4731_03780;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	172202	172763	.	-	0	ID=cds-J4731_03780;Parent=gene-J4731_03780;Note=frameshifted;gbkey=CDS;gene=cyoC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012988150.1;locus_tag=J4731_03780;product=cytochrome o ubiquinol oxidase subunit III;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	172801	174784	.	-	.	ID=gene-J4731_03785;Name=cyoB;gbkey=Gene;gene=cyoB;gene_biotype=pseudogene;locus_tag=J4731_03785;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	172801	174784	.	-	0	ID=cds-J4731_03785;Parent=gene-J4731_03785;Note=frameshifted;gbkey=CDS;gene=cyoB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308512.1;locus_tag=J4731_03785;product=cytochrome o ubiquinol oxidase subunit I;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	174789	175796	.	-	.	ID=gene-J4731_03790;Name=cyoA;gbkey=Gene;gene=cyoA;gene_biotype=pseudogene;locus_tag=J4731_03790;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	174789	175796	.	-	0	ID=cds-J4731_03790;Parent=gene-J4731_03790;Note=frameshifted;gbkey=CDS;gene=cyoA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004247223.1;locus_tag=J4731_03790;product=cytochrome o ubiquinol oxidase subunit II;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	176181	176930	.	-	.	ID=gene-J4731_03795;Name=J4731_03795;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_03795;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	176181	176930	.	-	0	ID=cds-J4731_03795;Parent=gene-J4731_03795;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000162399.1;locus_tag=J4731_03795;product=ion channel protein Tsx;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	177131	178706	.	-	.	ID=gene-J4731_03800;Name=J4731_03800;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_03800;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	177131	178706	.	-	0	ID=cds-J4731_03800;Parent=gene-J4731_03800;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006657214.1;locus_tag=J4731_03800;product=MFS transporter;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	178833	179413	.	-	.	ID=gene-J4731_03805;Name=J4731_03805;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_03805;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	178833	179413	.	-	0	ID=cds-J4731_03805;Parent=gene-J4731_03805;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006662770.1;locus_tag=J4731_03805;product=hypothetical protein;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	gene	179725	180006	.	+	.	ID=gene-J4731_03810;Name=bolA;gbkey=Gene;gene=bolA;gene_biotype=protein_coding;locus_tag=J4731_03810
JAGETS010000007.1	Protein Homology	CDS	179725	180006	.	+	0	ID=cds-MBO1928746.1;Parent=gene-J4731_03810;Dbxref=NCBI_GP:MBO1928746.1;Name=MBO1928746.1;gbkey=CDS;gene=bolA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010845042.1;locus_tag=J4731_03810;product=transcriptional regulator BolA;protein_id=MBO1928746.1;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	180352	181640	.	+	.	ID=gene-J4731_03815;Name=tig;gbkey=Gene;gene=tig;gene_biotype=pseudogene;locus_tag=J4731_03815;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	180352	181640	.	+	0	ID=cds-J4731_03815;Parent=gene-J4731_03815;Note=frameshifted;gbkey=CDS;gene=tig;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004245089.1;locus_tag=J4731_03815;product=trigger factor;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	182207	182779	.	+	.	ID=gene-J4731_03820;Name=clpP;gbkey=Gene;gene=clpP;gene_biotype=pseudogene;locus_tag=J4731_03820;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	182207	182779	.	+	0	ID=cds-J4731_03820;Parent=gene-J4731_03820;Note=frameshifted;gbkey=CDS;gene=clpP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005182201.1;locus_tag=J4731_03820;product=ATP-dependent Clp endopeptidase proteolytic subunit ClpP;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	182893	184164	.	+	.	ID=gene-J4731_03825;Name=clpX;gbkey=Gene;gene=clpX;gene_biotype=pseudogene;locus_tag=J4731_03825;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	182893	184164	.	+	0	ID=cds-J4731_03825;Parent=gene-J4731_03825;Note=frameshifted;gbkey=CDS;gene=clpX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006815753.1;locus_tag=J4731_03825;product=ATP-dependent protease ATP-binding subunit ClpX;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	184369	186789	.	+	.	ID=gene-J4731_03830;Name=lon;gbkey=Gene;gene=lon;gene_biotype=pseudogene;locus_tag=J4731_03830;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	184369	186789	.	+	0	ID=cds-J4731_03830;Parent=gene-J4731_03830;Note=frameshifted;gbkey=CDS;gene=lon;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016942072.1;locus_tag=J4731_03830;product=endopeptidase La;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	gene	187031	187306	.	+	.	ID=gene-J4731_03835;Name=hupB;gbkey=Gene;gene=hupB;gene_biotype=protein_coding;locus_tag=J4731_03835
JAGETS010000007.1	Protein Homology	CDS	187031	187306	.	+	0	ID=cds-MBO1928747.1;Parent=gene-J4731_03835;Dbxref=NCBI_GP:MBO1928747.1;Name=MBO1928747.1;gbkey=CDS;gene=hupB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014656769.1;locus_tag=J4731_03835;product=DNA-binding protein HU-beta;protein_id=MBO1928747.1;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	187480	189342	.	+	.	ID=gene-J4731_03840;Name=ppiD;gbkey=Gene;gene=ppiD;gene_biotype=pseudogene;locus_tag=J4731_03840;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	187480	189342	.	+	0	ID=cds-J4731_03840;Parent=gene-J4731_03840;Note=frameshifted%3B internal stop;gbkey=CDS;gene=ppiD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006662767.1;locus_tag=J4731_03840;product=peptidylprolyl isomerase;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	189486	189829	.	+	.	ID=gene-J4731_03845;Name=J4731_03845;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_03845;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	189486	189829	.	+	0	ID=cds-J4731_03845;Parent=gene-J4731_03845;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006662766.1;locus_tag=J4731_03845;product=helix-hairpin-helix domain-containing protein;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	190021	190448	.	+	.	ID=gene-J4731_03850;Name=J4731_03850;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_03850;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	190021	190448	.	+	0	ID=cds-J4731_03850;Parent=gene-J4731_03850;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004927043.1;locus_tag=J4731_03850;product=acyl-CoA thioesterase;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	190505	191191	.	-	.	ID=gene-J4731_03855;Name=queC;gbkey=Gene;gene=queC;gene_biotype=pseudogene;locus_tag=J4731_03855;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	190505	191191	.	-	0	ID=cds-J4731_03855;Parent=gene-J4731_03855;Note=frameshifted;gbkey=CDS;gene=queC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459451.1;locus_tag=J4731_03855;product=7-cyano-7-deazaguanine synthase QueC;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	191464	191923	.	+	.	ID=gene-J4731_03860;Name=J4731_03860;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_03860;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	191464	191923	.	+	0	ID=cds-J4731_03860;Parent=gene-J4731_03860;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208630.1;locus_tag=J4731_03860;product=Lrp/AsnC family transcriptional regulator;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	191998	193736	.	+	.	ID=gene-J4731_03865;Name=J4731_03865;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_03865;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	191998	193736	.	+	0	ID=cds-J4731_03865;Parent=gene-J4731_03865;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004927049.1;locus_tag=J4731_03865;product=SmdA family multidrug ABC transporter permease/ATP-binding protein;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	193733	195504	.	+	.	ID=gene-J4731_03870;Name=J4731_03870;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_03870;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	193733	195504	.	+	0	ID=cds-J4731_03870;Parent=gene-J4731_03870;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_114508866.1;locus_tag=J4731_03870;product=SmdB family multidrug efflux ABC transporter permease/ATP-binding protein;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	195675	195988	.	+	.	ID=gene-J4731_03875;Name=J4731_03875;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_03875;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	195675	195988	.	+	0	ID=cds-J4731_03875;Parent=gene-J4731_03875;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011014853.1;locus_tag=J4731_03875;product=P-II family nitrogen regulator;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	196019	197284	.	+	.	ID=gene-J4731_03880;Name=amtB;gbkey=Gene;gene=amtB;gene_biotype=pseudogene;locus_tag=J4731_03880;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	196019	197284	.	+	0	ID=cds-J4731_03880;Parent=gene-J4731_03880;Note=frameshifted;gbkey=CDS;gene=amtB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013183592.1;locus_tag=J4731_03880;product=ammonium transporter AmtB;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	197422	198287	.	-	.	ID=gene-J4731_03885;Name=J4731_03885;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_03885;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	197422	198287	.	-	0	ID=cds-J4731_03885;Parent=gene-J4731_03885;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006662762.1;locus_tag=J4731_03885;product=thioesterase family protein;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	198554	198951	.	+	.	ID=gene-J4731_03890;Name=J4731_03890;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_03890;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	198554	198951	.	+	0	ID=cds-J4731_03890;Parent=gene-J4731_03890;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004927062.1;locus_tag=J4731_03890;product=YbaY family lipoprotein;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	gene	199118	199212	.	+	.	ID=gene-J4731_03895;Name=ffs;gbkey=Gene;gene=ffs;gene_biotype=SRP_RNA;locus_tag=J4731_03895
JAGETS010000007.1	cmsearch	SRP_RNA	199118	199212	.	+	.	ID=rna-J4731_03895;Parent=gene-J4731_03895;Dbxref=RFAM:RF00169;gbkey=ncRNA;gene=ffs;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=J4731_03895;product=signal recognition particle sRNA small type
JAGETS010000007.1	cmsearch	exon	199118	199212	.	+	.	ID=exon-J4731_03895-1;Parent=rna-J4731_03895;Dbxref=RFAM:RF00169;gbkey=ncRNA;gene=ffs;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=J4731_03895;product=signal recognition particle sRNA small type
JAGETS010000007.1	Genbank	pseudogene	199517	199757	.	-	.	ID=gene-J4731_03900;Name=hha;gbkey=Gene;gene=hha;gene_biotype=pseudogene;locus_tag=J4731_03900;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	199517	199757	.	-	0	ID=cds-J4731_03900;Parent=gene-J4731_03900;Note=frameshifted;gbkey=CDS;gene=hha;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208622.1;locus_tag=J4731_03900;product=hemolysin expression modulator Hha;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	199831	200191	.	-	.	ID=gene-J4731_03905;Name=tomB;gbkey=Gene;gene=tomB;gene_biotype=pseudogene;locus_tag=J4731_03905;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	199831	200191	.	-	0	ID=cds-J4731_03905;Parent=gene-J4731_03905;Note=frameshifted;gbkey=CDS;gene=tomB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006662760.1;locus_tag=J4731_03905;product=Hha toxicity modulator TomB;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	200717	202051	.	-	.	ID=gene-J4731_03910;Name=mltD;gbkey=Gene;gene=mltD;gene_biotype=pseudogene;locus_tag=J4731_03910;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	200717	202051	.	-	0	ID=cds-J4731_03910;Parent=gene-J4731_03910;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;gene=mltD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004235954.1;locus_tag=J4731_03910;product=murein transglycosylase D;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	202126	202876	.	-	.	ID=gene-J4731_03915;Name=gloB;gbkey=Gene;gene=gloB;gene_biotype=pseudogene;locus_tag=J4731_03915;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	202126	202876	.	-	0	ID=cds-J4731_03915;Parent=gene-J4731_03915;Note=frameshifted%3B internal stop;gbkey=CDS;gene=gloB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006662758.1;locus_tag=J4731_03915;product=hydroxyacylglutathione hydrolase;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	202916	203551	.	+	.	ID=gene-J4731_03920;Name=J4731_03920;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_03920;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	202916	203551	.	+	0	ID=cds-J4731_03920;Parent=gene-J4731_03920;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004390358.1;locus_tag=J4731_03920;product=methyltransferase domain-containing protein;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	203638	204100	.	-	.	ID=gene-J4731_03925;Name=rnhA;gbkey=Gene;gene=rnhA;gene_biotype=pseudogene;locus_tag=J4731_03925;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	203638	204100	.	-	0	ID=cds-J4731_03925;Parent=gene-J4731_03925;Note=frameshifted;gbkey=CDS;gene=rnhA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004927090.1;locus_tag=J4731_03925;product=ribonuclease HI;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	204152	204911	.	+	.	ID=gene-J4731_03930;Name=dnaQ;gbkey=Gene;gene=dnaQ;gene_biotype=pseudogene;locus_tag=J4731_03930;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	204152	204911	.	+	0	ID=cds-J4731_03930;Parent=gene-J4731_03930;Note=frameshifted;gbkey=CDS;gene=dnaQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006662757.1;locus_tag=J4731_03930;product=DNA polymerase III subunit epsilon;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	gene	205065	205136	.	+	.	ID=gene-J4731_03935;Name=J4731_03935;gbkey=Gene;gene_biotype=tRNA;locus_tag=J4731_03935
JAGETS010000007.1	tRNAscan-SE	tRNA	205065	205136	.	+	.	ID=rna-J4731_03935;Parent=gene-J4731_03935;anticodon=(pos:205099..205101);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=J4731_03935;product=tRNA-Asp
JAGETS010000007.1	tRNAscan-SE	exon	205065	205136	.	+	.	ID=exon-J4731_03935-1;Parent=rna-J4731_03935;anticodon=(pos:205099..205101);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=J4731_03935;product=tRNA-Asp
JAGETS010000007.1	Genbank	gene	205399	205611	.	-	.	ID=gene-J4731_03940;Name=J4731_03940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_03940
JAGETS010000007.1	Protein Homology	CDS	205399	205611	.	-	0	ID=cds-MBO1928748.1;Parent=gene-J4731_03940;Dbxref=NCBI_GP:MBO1928748.1;Name=MBO1928748.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004926025.1;locus_tag=J4731_03940;product=helix-turn-helix transcriptional regulator;protein_id=MBO1928748.1;transl_table=11
JAGETS010000007.1	Genbank	gene	209387	209647	.	-	.	ID=gene-J4731_03945;Name=J4731_03945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_03945
JAGETS010000007.1	GeneMarkS-2+	CDS	209387	209647	.	-	0	ID=cds-MBO1928749.1;Parent=gene-J4731_03945;Dbxref=NCBI_GP:MBO1928749.1;Name=MBO1928749.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_03945;product=hypothetical protein;protein_id=MBO1928749.1;transl_table=11
JAGETS010000007.1	Genbank	gene	209687	209995	.	-	.	ID=gene-J4731_03950;Name=J4731_03950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_03950
JAGETS010000007.1	GeneMarkS-2+	CDS	209687	209995	.	-	0	ID=cds-MBO1928750.1;Parent=gene-J4731_03950;Dbxref=NCBI_GP:MBO1928750.1;Name=MBO1928750.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_03950;product=hypothetical protein;protein_id=MBO1928750.1;transl_table=11
JAGETS010000007.1	Genbank	gene	210037	210306	.	-	.	ID=gene-J4731_03955;Name=J4731_03955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_03955
JAGETS010000007.1	GeneMarkS-2+	CDS	210037	210306	.	-	0	ID=cds-MBO1928751.1;Parent=gene-J4731_03955;Dbxref=NCBI_GP:MBO1928751.1;Name=MBO1928751.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_03955;product=hypothetical protein;protein_id=MBO1928751.1;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	210332	212797	.	-	.	ID=gene-J4731_03960;Name=J4731_03960;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_03960;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	210332	212797	.	-	0	ID=cds-J4731_03960;Parent=gene-J4731_03960;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017628610.1;locus_tag=J4731_03960;product=CS1-pili formation C-terminal domain-containing protein;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	212817	213487	.	-	.	ID=gene-J4731_03965;Name=J4731_03965;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_03965;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	212817	213487	.	-	0	ID=cds-J4731_03965;Parent=gene-J4731_03965;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008913156.1;locus_tag=J4731_03965;product=hypothetical protein;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	213581	214172	.	-	.	ID=gene-J4731_03970;Name=J4731_03970;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_03970;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	213581	214172	.	-	0	ID=cds-J4731_03970;Parent=gene-J4731_03970;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013878116.1;locus_tag=J4731_03970;product=fimbrial protein;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	214321	214574	.	-	.	ID=gene-J4731_03975;Name=J4731_03975;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_03975;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	214321	214574	.	-	0	ID=cds-J4731_03975;Parent=gene-J4731_03975;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008913147.1;locus_tag=J4731_03975;product=helix-turn-helix transcriptional regulator;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	216274	218261	.	+	.	ID=gene-J4731_03980;Name=tkt;gbkey=Gene;gene=tkt;gene_biotype=pseudogene;locus_tag=J4731_03980;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	216274	218261	.	+	0	ID=cds-J4731_03980;Parent=gene-J4731_03980;Note=frameshifted%3B internal stop;gbkey=CDS;gene=tkt;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015872580.1;locus_tag=J4731_03980;product=transketolase;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	218573	219586	.	+	.	ID=gene-J4731_03985;Name=epd;gbkey=Gene;gene=epd;gene_biotype=pseudogene;locus_tag=J4731_03985;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	218573	219586	.	+	0	ID=cds-J4731_03985;Parent=gene-J4731_03985;Note=frameshifted;gbkey=CDS;gene=epd;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004905387.1;locus_tag=J4731_03985;product=erythrose-4-phosphate dehydrogenase;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	219694	220838	.	+	.	ID=gene-J4731_03990;Name=pgk;gbkey=Gene;gene=pgk;gene_biotype=pseudogene;locus_tag=J4731_03990;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	219694	220838	.	+	0	ID=cds-J4731_03990;Parent=gene-J4731_03990;Note=frameshifted;gbkey=CDS;gene=pgk;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016930031.1;locus_tag=J4731_03990;product=phosphoglycerate kinase;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	220898	221962	.	+	.	ID=gene-J4731_03995;Name=fbaA;gbkey=Gene;gene=fbaA;gene_biotype=pseudogene;locus_tag=J4731_03995;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	220898	221962	.	+	0	ID=cds-J4731_03995;Parent=gene-J4731_03995;Note=frameshifted;gbkey=CDS;gene=fbaA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228720.1;locus_tag=J4731_03995;product=class II fructose-bisphosphate aldolase;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	gene	222388	222600	.	-	.	ID=gene-J4731_04000;Name=J4731_04000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_04000
JAGETS010000007.1	Protein Homology	CDS	222388	222600	.	-	0	ID=cds-MBO1928752.1;Parent=gene-J4731_04000;Dbxref=NCBI_GP:MBO1928752.1;Name=MBO1928752.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015431.1;locus_tag=J4731_04000;product=hypothetical protein;protein_id=MBO1928752.1;transl_table=11
JAGETS010000007.1	Genbank	gene	222662	222841	.	-	.	ID=gene-J4731_04005;Name=J4731_04005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_04005
JAGETS010000007.1	Protein Homology	CDS	222662	222841	.	-	0	ID=cds-MBO1928753.1;Parent=gene-J4731_04005;Dbxref=NCBI_GP:MBO1928753.1;Name=MBO1928753.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012354.1;locus_tag=J4731_04005;product=LysR family transcriptional regulator;protein_id=MBO1928753.1;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	223177	224388	.	+	.	ID=gene-J4731_04010;Name=J4731_04010;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_04010;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	223177	224388	.	+	0	ID=cds-J4731_04010;Parent=gene-J4731_04010;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004905380.1;locus_tag=J4731_04010;product=sodium:glutamate symporter;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	224436	225389	.	+	.	ID=gene-J4731_04015;Name=J4731_04015;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_04015;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	224436	225389	.	+	0	ID=cds-J4731_04015;Parent=gene-J4731_04015;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013509112.1;locus_tag=J4731_04015;product=agmatinase;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	225790	226662	.	-	.	ID=gene-J4731_04020;Name=J4731_04020;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_04020;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	225790	226662	.	-	0	ID=cds-J4731_04020;Parent=gene-J4731_04020;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004905377.1;locus_tag=J4731_04020;product=LysR family transcriptional regulator;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	226729	227405	.	+	.	ID=gene-J4731_04025;Name=J4731_04025;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_04025;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	226729	227405	.	+	0	ID=cds-J4731_04025;Parent=gene-J4731_04025;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017827803.1;locus_tag=J4731_04025;product=ankyrin repeat domain-containing protein;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	227445	227859	.	+	.	ID=gene-J4731_04030;Name=J4731_04030;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_04030;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	227445	227859	.	+	0	ID=cds-J4731_04030;Parent=gene-J4731_04030;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004905373.1;locus_tag=J4731_04030;product=nucleoside deaminase;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	227856	229014	.	+	.	ID=gene-J4731_04035;Name=J4731_04035;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_04035;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	227856	229014	.	+	0	ID=cds-J4731_04035;Parent=gene-J4731_04035;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004905371.1;locus_tag=J4731_04035;product=MFS transporter;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	229109	230035	.	+	.	ID=gene-J4731_04040;Name=J4731_04040;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_04040;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	229109	230035	.	+	0	ID=cds-J4731_04040;Parent=gene-J4731_04040;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001608722.1;locus_tag=J4731_04040;product=helix-turn-helix transcriptional regulator;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	230167	232197	.	+	.	ID=gene-J4731_04045;Name=J4731_04045;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_04045;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	230167	232197	.	+	0	ID=cds-J4731_04045;Parent=gene-J4731_04045;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003111969.1;locus_tag=J4731_04045;product=TonB-dependent siderophore receptor;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	232174	232446	.	+	.	ID=gene-J4731_04050;Name=J4731_04050;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_04050;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	232174	232446	.	+	0	ID=cds-J4731_04050;Parent=gene-J4731_04050;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001608725.1;locus_tag=J4731_04050;product=hypothetical protein;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	232443	233864	.	+	.	ID=gene-J4731_04055;Name=J4731_04055;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_04055;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	232443	233864	.	+	0	ID=cds-J4731_04055;Parent=gene-J4731_04055;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001608727.1;locus_tag=J4731_04055;product=PepSY domain-containing protein;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	233842	235058	.	+	.	ID=gene-J4731_04060;Name=J4731_04060;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_04060;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	233842	235058	.	+	0	ID=cds-J4731_04060;Parent=gene-J4731_04060;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019841493.1;locus_tag=J4731_04060;product=RhtX/FptX family siderophore transporter;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	235461	235979	.	-	.	ID=gene-J4731_04065;Name=J4731_04065;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_04065;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	235461	235979	.	-	0	ID=cds-J4731_04065;Parent=gene-J4731_04065;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006815691.1;locus_tag=J4731_04065;product=LemA family protein;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	236001	236795	.	-	.	ID=gene-J4731_04070;Name=J4731_04070;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_04070;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	236001	236795	.	-	0	ID=cds-J4731_04070;Parent=gene-J4731_04070;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006662708.1;locus_tag=J4731_04070;product=hypothetical protein;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	gene	236987	237322	.	-	.	ID=gene-J4731_04075;Name=J4731_04075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_04075
JAGETS010000007.1	Protein Homology	CDS	236987	237322	.	-	0	ID=cds-MBO1928754.1;Parent=gene-J4731_04075;Dbxref=NCBI_GP:MBO1928754.1;Name=MBO1928754.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015944.1;locus_tag=J4731_04075;product=LemA family protein;protein_id=MBO1928754.1;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	239504	240561	.	-	.	ID=gene-J4731_04080;Name=J4731_04080;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_04080;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	239504	240561	.	-	0	ID=cds-J4731_04080;Parent=gene-J4731_04080;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004905351.1;locus_tag=J4731_04080;product=adhesin;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	240564	241066	.	-	.	ID=gene-J4731_04085;Name=J4731_04085;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_04085;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	240564	241066	.	-	0	ID=cds-J4731_04085;Parent=gene-J4731_04085;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004905345.1;locus_tag=J4731_04085;product=fimbrial protein;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	241132	241546	.	-	.	ID=gene-J4731_04090;Name=J4731_04090;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_04090;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	241132	241546	.	-	0	ID=cds-J4731_04090;Parent=gene-J4731_04090;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006657253.1;locus_tag=J4731_04090;product=type 1 fimbrial protein;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	gene	241713	241946	.	-	.	ID=gene-J4731_04095;Name=J4731_04095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_04095
JAGETS010000007.1	GeneMarkS-2+	CDS	241713	241946	.	-	0	ID=cds-MBO1928755.1;Parent=gene-J4731_04095;Dbxref=NCBI_GP:MBO1928755.1;Name=MBO1928755.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_04095;product=hypothetical protein;protein_id=MBO1928755.1;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	241975	242688	.	-	.	ID=gene-J4731_04100;Name=J4731_04100;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_04100;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	241975	242688	.	-	0	ID=cds-J4731_04100;Parent=gene-J4731_04100;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008913208.1;locus_tag=J4731_04100;product=fimbria/pilus periplasmic chaperone;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	242712	245193	.	-	.	ID=gene-J4731_04105;Name=J4731_04105;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_04105;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	242712	245193	.	-	0	ID=cds-J4731_04105;Parent=gene-J4731_04105;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004905341.1;locus_tag=J4731_04105;product=fimbria/pilus outer membrane usher protein;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	245227	245770	.	-	.	ID=gene-J4731_04110;Name=J4731_04110;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_04110;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	245227	245770	.	-	0	ID=cds-J4731_04110;Parent=gene-J4731_04110;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004905333.1;locus_tag=J4731_04110;product=type 1 fimbrial protein;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	gene	245833	246384	.	-	.	ID=gene-J4731_04115;Name=J4731_04115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_04115
JAGETS010000007.1	Protein Homology	CDS	245833	246384	.	-	0	ID=cds-MBO1928756.1;Parent=gene-J4731_04115;Dbxref=NCBI_GP:MBO1928756.1;Name=MBO1928756.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004905332.1;locus_tag=J4731_04115;product=type 1 fimbrial protein;protein_id=MBO1928756.1;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	247240	248054	.	-	.	ID=gene-J4731_04120;Name=J4731_04120;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_04120;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	247240	248054	.	-	0	ID=cds-J4731_04120;Parent=gene-J4731_04120;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006662723.1;locus_tag=J4731_04120;product=helix-turn-helix domain-containing protein;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	248415	248931	.	-	.	ID=gene-J4731_04125;Name=hpaC;gbkey=Gene;gene=hpaC;gene_biotype=pseudogene;locus_tag=J4731_04125;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	248415	248931	.	-	0	ID=cds-J4731_04125;Parent=gene-J4731_04125;Note=frameshifted;gbkey=CDS;gene=hpaC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004905327.1;locus_tag=J4731_04125;product=4-hydroxyphenylacetate 3-monooxygenase%2C reductase component;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	248951	250485	.	-	.	ID=gene-J4731_04130;Name=hpaB;gbkey=Gene;gene=hpaB;gene_biotype=pseudogene;locus_tag=J4731_04130;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	248951	250485	.	-	0	ID=cds-J4731_04130;Parent=gene-J4731_04130;Note=frameshifted;gbkey=CDS;gene=hpaB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000801462.1;locus_tag=J4731_04130;product=4-hydroxyphenylacetate 3-monooxygenase%2C oxygenase component;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	250993	251854	.	-	.	ID=gene-J4731_04135;Name=hpaA;gbkey=Gene;gene=hpaA;gene_biotype=pseudogene;locus_tag=J4731_04135;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	250993	251854	.	-	0	ID=cds-J4731_04135;Parent=gene-J4731_04135;Note=frameshifted%3B internal stop;gbkey=CDS;gene=hpaA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006815716.1;locus_tag=J4731_04135;product=4-hydroxyphenylacetate catabolism regulatory protein HpaA;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	252064	253415	.	-	.	ID=gene-J4731_04140;Name=hpaX;gbkey=Gene;gene=hpaX;gene_biotype=pseudogene;locus_tag=J4731_04140;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	252064	253415	.	-	0	ID=cds-J4731_04140;Parent=gene-J4731_04140;Note=frameshifted;gbkey=CDS;gene=hpaX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006815714.1;locus_tag=J4731_04140;product=4-hydroxyphenylacetate permease;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	253580	254311	.	-	.	ID=gene-J4731_04145;Name=J4731_04145;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_04145;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	253580	254311	.	-	0	ID=cds-J4731_04145;Parent=gene-J4731_04145;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013367765.1;locus_tag=J4731_04145;product=4-hydroxy-2-oxo-heptane-1%2C7-dioate aldolase;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	254376	255156	.	-	.	ID=gene-J4731_04150;Name=hpaH;gbkey=Gene;gene=hpaH;gene_biotype=pseudogene;locus_tag=J4731_04150;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	254376	255156	.	-	0	ID=cds-J4731_04150;Parent=gene-J4731_04150;Note=frameshifted;gbkey=CDS;gene=hpaH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017371574.1;locus_tag=J4731_04150;product=2-oxo-hepta-3-ene-1%2C7-dioic acid hydratase;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	255287	256736	.	-	.	ID=gene-J4731_04155;Name=J4731_04155;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_04155;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	255287	256736	.	-	0	ID=cds-J4731_04155;Parent=gene-J4731_04155;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000773908.1;locus_tag=J4731_04155;product=NAD-dependent succinate-semialdehyde dehydrogenase;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	256733	257946	.	-	.	ID=gene-J4731_04160;Name=J4731_04160;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_04160;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	256733	257946	.	-	0	ID=cds-J4731_04160;Parent=gene-J4731_04160;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004905316.1;locus_tag=J4731_04160;product=Bcr/CflA family multidrug efflux MFS transporter;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	gene	257987	258367	.	-	.	ID=gene-J4731_04165;Name=J4731_04165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_04165
JAGETS010000007.1	Protein Homology	CDS	257987	258367	.	-	0	ID=cds-MBO1928757.1;Parent=gene-J4731_04165;Dbxref=NCBI_GP:MBO1928757.1;Name=MBO1928757.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004905302.1;locus_tag=J4731_04165;product=5-carboxymethyl-2-hydroxymuconate Delta-isomerase;protein_id=MBO1928757.1;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	258377	259250	.	-	.	ID=gene-J4731_04170;Name=hpaD;gbkey=Gene;gene=hpaD;gene_biotype=pseudogene;locus_tag=J4731_04170;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	258377	259250	.	-	0	ID=cds-J4731_04170;Parent=gene-J4731_04170;Note=frameshifted;gbkey=CDS;gene=hpaD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004927362.1;locus_tag=J4731_04170;product=3%2C4-dihydroxyphenylacetate 2%2C3-dioxygenase;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	259487	260945	.	-	.	ID=gene-J4731_04175;Name=hpaE;gbkey=Gene;gene=hpaE;gene_biotype=pseudogene;locus_tag=J4731_04175;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	259487	260945	.	-	0	ID=cds-J4731_04175;Parent=gene-J4731_04175;Note=frameshifted;gbkey=CDS;gene=hpaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_710092.1;locus_tag=J4731_04175;product=5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	260945	261642	.	-	.	ID=gene-J4731_04180;Name=J4731_04180;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_04180;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	260945	261642	.	-	0	ID=cds-J4731_04180;Parent=gene-J4731_04180;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004108544.1;locus_tag=J4731_04180;product=fumarylacetoacetate hydrolase family protein;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	261719	262340	.	-	.	ID=gene-J4731_04185;Name=J4731_04185;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_04185;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	261719	262340	.	-	0	ID=cds-J4731_04185;Parent=gene-J4731_04185;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006657321.1;locus_tag=J4731_04185;product=fumarylacetoacetate hydrolase family protein;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	262770	263188	.	+	.	ID=gene-J4731_04190;Name=hpaR;gbkey=Gene;gene=hpaR;gene_biotype=pseudogene;locus_tag=J4731_04190;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	262770	263188	.	+	0	ID=cds-J4731_04190;Parent=gene-J4731_04190;Note=frameshifted%3B internal stop;gbkey=CDS;gene=hpaR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019454952.1;locus_tag=J4731_04190;product=homoprotocatechuate degradation operon regulator HpaR;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	gene	263992	264360	.	+	.	ID=gene-J4731_04195;Name=J4731_04195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_04195
JAGETS010000007.1	Protein Homology	CDS	263992	264360	.	+	0	ID=cds-MBO1928758.1;Parent=gene-J4731_04195;Dbxref=NCBI_GP:MBO1928758.1;Name=MBO1928758.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020068.1;locus_tag=J4731_04195;product=ShlB/FhaC/HecB family hemolysin secretion/activation protein;protein_id=MBO1928758.1;transl_table=11
JAGETS010000007.1	Genbank	gene	264391	264516	.	+	.	ID=gene-J4731_04200;Name=J4731_04200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_04200
JAGETS010000007.1	Protein Homology	CDS	264391	264516	.	+	0	ID=cds-MBO1928759.1;Parent=gene-J4731_04200;Dbxref=NCBI_GP:MBO1928759.1;Name=MBO1928759.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF036420.1;locus_tag=J4731_04200;product=hypothetical protein;protein_id=MBO1928759.1;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	264554	265526	.	+	.	ID=gene-J4731_04205;Name=J4731_04205;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_04205;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	264554	265526	.	+	0	ID=cds-J4731_04205;Parent=gene-J4731_04205;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004905287.1;locus_tag=J4731_04205;product=ShlB/FhaC/HecB family hemolysin secretion/activation protein;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	gene	265673	265900	.	+	.	ID=gene-J4731_04210;Name=J4731_04210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_04210
JAGETS010000007.1	Protein Homology	CDS	265673	265900	.	+	0	ID=cds-MBO1928760.1;Parent=gene-J4731_04210;Dbxref=NCBI_GP:MBO1928760.1;Name=MBO1928760.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017658.1;locus_tag=J4731_04210;product=hypothetical protein;protein_id=MBO1928760.1;transl_table=11
JAGETS010000007.1	Genbank	gene	265891	266013	.	+	.	ID=gene-J4731_04215;Name=J4731_04215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_04215
JAGETS010000007.1	Protein Homology	CDS	265891	266013	.	+	0	ID=cds-MBO1928761.1;Parent=gene-J4731_04215;Dbxref=NCBI_GP:MBO1928761.1;Name=MBO1928761.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR01901.1;locus_tag=J4731_04215;product=filamentous hemagglutinin N-terminal domain-containing protein;protein_id=MBO1928761.1;transl_table=11
JAGETS010000007.1	Genbank	gene	266248	266439	.	+	.	ID=gene-J4731_04220;Name=J4731_04220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_04220
JAGETS010000007.1	GeneMarkS-2+	CDS	266248	266439	.	+	0	ID=cds-MBO1928762.1;Parent=gene-J4731_04220;Dbxref=NCBI_GP:MBO1928762.1;Name=MBO1928762.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_04220;product=hypothetical protein;protein_id=MBO1928762.1;transl_table=11
JAGETS010000007.1	Genbank	gene	266436	266840	.	+	.	ID=gene-J4731_04225;Name=J4731_04225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_04225
JAGETS010000007.1	Protein Homology	CDS	266436	266840	.	+	0	ID=cds-MBO1928763.1;Parent=gene-J4731_04225;Dbxref=NCBI_GP:MBO1928763.1;Name=MBO1928763.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR01731.1;locus_tag=J4731_04225;product=hypothetical protein;protein_id=MBO1928763.1;transl_table=11
JAGETS010000007.1	Genbank	gene	266828	267010	.	+	.	ID=gene-J4731_04230;Name=J4731_04230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_04230
JAGETS010000007.1	GeneMarkS-2+	CDS	266828	267010	.	+	0	ID=cds-MBO1928764.1;Parent=gene-J4731_04230;Dbxref=NCBI_GP:MBO1928764.1;Name=MBO1928764.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_04230;product=hypothetical protein;protein_id=MBO1928764.1;transl_table=11
JAGETS010000007.1	Genbank	gene	267439	267834	.	+	.	ID=gene-J4731_04235;Name=J4731_04235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_04235
JAGETS010000007.1	GeneMarkS-2+	CDS	267439	267834	.	+	0	ID=cds-MBO1928765.1;Parent=gene-J4731_04235;Dbxref=NCBI_GP:MBO1928765.1;Name=MBO1928765.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_04235;product=hypothetical protein;protein_id=MBO1928765.1;transl_table=11
JAGETS010000007.1	Genbank	gene	267856	268254	.	+	.	ID=gene-J4731_04240;Name=J4731_04240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_04240
JAGETS010000007.1	Protein Homology	CDS	267856	268254	.	+	0	ID=cds-MBO1928766.1;Parent=gene-J4731_04240;Dbxref=NCBI_GP:MBO1928766.1;Name=MBO1928766.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024728.1;locus_tag=J4731_04240;product=hemagglutinin repeat-containing protein;protein_id=MBO1928766.1;transl_table=11
JAGETS010000007.1	Genbank	gene	268390	268560	.	+	.	ID=gene-J4731_04245;Name=J4731_04245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_04245
JAGETS010000007.1	GeneMarkS-2+	CDS	268390	268560	.	+	0	ID=cds-MBO1928767.1;Parent=gene-J4731_04245;Dbxref=NCBI_GP:MBO1928767.1;Name=MBO1928767.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_04245;product=hypothetical protein;protein_id=MBO1928767.1;transl_table=11
JAGETS010000007.1	Genbank	gene	268664	268939	.	+	.	ID=gene-J4731_04250;Name=J4731_04250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_04250
JAGETS010000007.1	GeneMarkS-2+	CDS	268664	268939	.	+	0	ID=cds-MBO1928768.1;Parent=gene-J4731_04250;Dbxref=NCBI_GP:MBO1928768.1;Name=MBO1928768.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_04250;product=hypothetical protein;protein_id=MBO1928768.1;transl_table=11
JAGETS010000007.1	Genbank	gene	269286	269471	.	+	.	ID=gene-J4731_04255;Name=J4731_04255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_04255
JAGETS010000007.1	GeneMarkS-2+	CDS	269286	269471	.	+	0	ID=cds-MBO1928769.1;Parent=gene-J4731_04255;Dbxref=NCBI_GP:MBO1928769.1;Name=MBO1928769.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_04255;product=hypothetical protein;protein_id=MBO1928769.1;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	270020	270583	.	+	.	ID=gene-J4731_04260;Name=J4731_04260;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_04260;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	270020	270583	.	+	0	ID=cds-J4731_04260;Parent=gene-J4731_04260;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001350996.1;locus_tag=J4731_04260;product=hypothetical protein;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	271817	272110	.	+	.	ID=gene-J4731_04265;Name=cdiI;gbkey=Gene;gene=cdiI;gene_biotype=pseudogene;locus_tag=J4731_04265;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	271817	272110	.	+	0	ID=cds-J4731_04265;Parent=gene-J4731_04265;Note=frameshifted;gbkey=CDS;gene=cdiI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001046155.1;locus_tag=J4731_04265;product=ribonuclease toxin immunity protein CdiI;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	gene	273489	273914	.	-	.	ID=gene-J4731_04270;Name=J4731_04270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_04270
JAGETS010000007.1	GeneMarkS-2+	CDS	273489	273914	.	-	0	ID=cds-MBO1928770.1;Parent=gene-J4731_04270;Dbxref=NCBI_GP:MBO1928770.1;Name=MBO1928770.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_04270;product=hypothetical protein;protein_id=MBO1928770.1;transl_table=11
JAGETS010000007.1	Genbank	gene	273892	274302	.	-	.	ID=gene-J4731_04275;Name=J4731_04275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_04275
JAGETS010000007.1	GeneMarkS-2+	CDS	273892	274302	.	-	0	ID=cds-MBO1928771.1;Parent=gene-J4731_04275;Dbxref=NCBI_GP:MBO1928771.1;Name=MBO1928771.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_04275;product=hypothetical protein;protein_id=MBO1928771.1;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	274281	274759	.	-	.	ID=gene-J4731_04280;Name=J4731_04280;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_04280;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	274281	274759	.	-	0	ID=cds-J4731_04280;Parent=gene-J4731_04280;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004243590.1;locus_tag=J4731_04280;product=Hcp family type VI secretion system effector;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	275469	277457	.	-	.	ID=gene-J4731_04285;Name=betT;gbkey=Gene;gene=betT;gene_biotype=pseudogene;locus_tag=J4731_04285;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	275469	277457	.	-	0	ID=cds-J4731_04285;Parent=gene-J4731_04285;Note=frameshifted;gbkey=CDS;gene=betT;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004235923.1;locus_tag=J4731_04285;product=choline BCCT transporter BetT;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	277828	278131	.	-	.	ID=gene-J4731_04290;Name=J4731_04290;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_04290;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	277828	278131	.	-	0	ID=cds-J4731_04290;Parent=gene-J4731_04290;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000146343.1;locus_tag=J4731_04290;product=DksA/TraR family C4-type zinc finger protein;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	gene	278205	278639	.	-	.	ID=gene-J4731_04295;Name=J4731_04295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_04295
JAGETS010000007.1	Protein Homology	CDS	278205	278639	.	-	0	ID=cds-MBO1928772.1;Parent=gene-J4731_04295;Dbxref=NCBI_GP:MBO1928772.1;Name=MBO1928772.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004905264.1;locus_tag=J4731_04295;product=GNAT family N-acetyltransferase;protein_id=MBO1928772.1;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	278781	279101	.	-	.	ID=gene-J4731_04300;Name=J4731_04300;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_04300;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	278781	279101	.	-	0	ID=cds-J4731_04300;Parent=gene-J4731_04300;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006657325.1;locus_tag=J4731_04300;product=hypothetical protein;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	279398	280091	.	+	.	ID=gene-J4731_04305;Name=J4731_04305;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_04305;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	279398	280091	.	+	0	ID=cds-J4731_04305;Parent=gene-J4731_04305;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008913429.1;locus_tag=J4731_04305;product=DUF421 domain-containing protein;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	280132	281833	.	-	.	ID=gene-J4731_04310;Name=cptA;gbkey=Gene;gene=cptA;gene_biotype=pseudogene;locus_tag=J4731_04310;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	280132	281833	.	-	0	ID=cds-J4731_04310;Parent=gene-J4731_04310;Note=frameshifted;gbkey=CDS;gene=cptA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006815698.1;locus_tag=J4731_04310;product=phosphoethanolamine transferase CptA;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	282189	283338	.	+	.	ID=gene-J4731_04315;Name=J4731_04315;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_04315;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	282189	283338	.	+	0	ID=cds-J4731_04315;Parent=gene-J4731_04315;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004927391.1;locus_tag=J4731_04315;product=NAD-binding protein;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	283372	283998	.	+	.	ID=gene-J4731_04320;Name=ccmA;gbkey=Gene;gene=ccmA;gene_biotype=pseudogene;locus_tag=J4731_04320;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	283372	283998	.	+	0	ID=cds-J4731_04320;Parent=gene-J4731_04320;Note=frameshifted;gbkey=CDS;gene=ccmA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004905256.1;locus_tag=J4731_04320;product=cytochrome c biogenesis heme-transporting ATPase CcmA;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	283983	284628	.	+	.	ID=gene-J4731_04325;Name=ccmB;gbkey=Gene;gene=ccmB;gene_biotype=pseudogene;locus_tag=J4731_04325;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	283983	284628	.	+	0	ID=cds-J4731_04325;Parent=gene-J4731_04325;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;gene=ccmB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209694.1;locus_tag=J4731_04325;product=heme exporter protein CcmB;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	gene	285118	285462	.	+	.	ID=gene-J4731_04330;Name=J4731_04330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_04330
JAGETS010000007.1	GeneMarkS-2+	CDS	285118	285462	.	+	0	ID=cds-MBO1928773.1;Parent=gene-J4731_04330;Dbxref=NCBI_GP:MBO1928773.1;Name=MBO1928773.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_04330;product=hypothetical protein;protein_id=MBO1928773.1;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	285880	286144	.	+	.	ID=gene-J4731_04335;Name=J4731_04335;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_04335;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	285880	286144	.	+	0	ID=cds-J4731_04335;Parent=gene-J4731_04335;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004917417.1;locus_tag=J4731_04335;product=thioredoxin family protein;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	286144	286930	.	+	.	ID=gene-J4731_04340;Name=J4731_04340;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_04340;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	286144	286930	.	+	0	ID=cds-J4731_04340;Parent=gene-J4731_04340;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004905249.1;locus_tag=J4731_04340;product=sulfite exporter TauE/SafE family protein;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	287151	288155	.	+	.	ID=gene-J4731_04345;Name=J4731_04345;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_04345;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	287151	288155	.	+	0	ID=cds-J4731_04345;Parent=gene-J4731_04345;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006662712.1;locus_tag=J4731_04345;product=LacI family DNA-binding transcriptional regulator;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	288349	289273	.	-	.	ID=gene-J4731_04350;Name=J4731_04350;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_04350;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	288349	289273	.	-	0	ID=cds-J4731_04350;Parent=gene-J4731_04350;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016583098.1;locus_tag=J4731_04350;product=ribose ABC transporter permease;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	289284	290758	.	-	.	ID=gene-J4731_04355;Name=J4731_04355;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_04355;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	289284	290758	.	-	0	ID=cds-J4731_04355;Parent=gene-J4731_04355;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192642.1;locus_tag=J4731_04355;product=sugar ABC transporter ATP-binding protein;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	290912	291769	.	-	.	ID=gene-J4731_04360;Name=J4731_04360;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_04360;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	290912	291769	.	-	0	ID=cds-J4731_04360;Parent=gene-J4731_04360;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014228426.1;locus_tag=J4731_04360;product=ABC transporter substrate-binding protein;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	291920	292961	.	-	.	ID=gene-J4731_04365;Name=J4731_04365;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_04365;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	291920	292961	.	-	0	ID=cds-J4731_04365;Parent=gene-J4731_04365;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004100247.1;locus_tag=J4731_04365;product=alcohol dehydrogenase catalytic domain-containing protein;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	293705	294993	.	-	.	ID=gene-J4731_04370;Name=J4731_04370;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_04370;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	293705	294993	.	-	0	ID=cds-J4731_04370;Parent=gene-J4731_04370;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001616045.1;locus_tag=J4731_04370;product=anaerobic C4-dicarboxylate transporter;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	295063	295782	.	-	.	ID=gene-J4731_04375;Name=J4731_04375;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_04375;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	295063	295782	.	-	0	ID=cds-J4731_04375;Parent=gene-J4731_04375;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016156986.1;locus_tag=J4731_04375;product=amino acid racemase;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	296241	297165	.	+	.	ID=gene-J4731_04380;Name=hypT;gbkey=Gene;gene=hypT;gene_biotype=pseudogene;gene_synonym=qseD;locus_tag=J4731_04380;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	296241	297165	.	+	0	ID=cds-J4731_04380;Parent=gene-J4731_04380;Note=frameshifted;gbkey=CDS;gene=hypT;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003834533.1;locus_tag=J4731_04380;product=hypochlorite stress DNA-binding transcriptional regulator HypT;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	297547	298056	.	-	.	ID=gene-J4731_04385;Name=J4731_04385;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_04385;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	297547	298056	.	-	0	ID=cds-J4731_04385;Parent=gene-J4731_04385;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000115885.1;locus_tag=J4731_04385;product=ClbS/DfsB family four-helix bundle protein;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	298707	299611	.	+	.	ID=gene-J4731_04390;Name=melR;gbkey=Gene;gene=melR;gene_biotype=pseudogene;locus_tag=J4731_04390;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	298707	299611	.	+	0	ID=cds-J4731_04390;Parent=gene-J4731_04390;Note=frameshifted;gbkey=CDS;gene=melR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001365424.1;locus_tag=J4731_04390;product=transcriptional regulator MelR;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	299739	301118	.	+	.	ID=gene-J4731_04395;Name=nhaC;gbkey=Gene;gene=nhaC;gene_biotype=pseudogene;locus_tag=J4731_04395;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	299739	301118	.	+	0	ID=cds-J4731_04395;Parent=gene-J4731_04395;Note=frameshifted;gbkey=CDS;gene=nhaC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004847409.1;locus_tag=J4731_04395;product=Na+/H+ antiporter NhaC;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	301164	302303	.	+	.	ID=gene-J4731_04400;Name=J4731_04400;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_04400;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	301164	302303	.	+	0	ID=cds-J4731_04400;Parent=gene-J4731_04400;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008785581.1;locus_tag=J4731_04400;product=aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	gene	302440	302514	.	-	.	ID=gene-J4731_04405;Name=J4731_04405;gbkey=Gene;gene_biotype=tRNA;locus_tag=J4731_04405
JAGETS010000007.1	tRNAscan-SE	tRNA	302440	302514	.	-	.	ID=rna-J4731_04405;Parent=gene-J4731_04405;anticodon=(pos:complement(302479..302481));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=J4731_04405;product=tRNA-Phe
JAGETS010000007.1	tRNAscan-SE	exon	302440	302514	.	-	.	ID=exon-J4731_04405-1;Parent=rna-J4731_04405;anticodon=(pos:complement(302479..302481));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=J4731_04405;product=tRNA-Phe
JAGETS010000007.1	Genbank	pseudogene	302696	303741	.	-	.	ID=gene-J4731_04410;Name=mltC;gbkey=Gene;gene=mltC;gene_biotype=pseudogene;locus_tag=J4731_04410;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	302696	303741	.	-	0	ID=cds-J4731_04410;Parent=gene-J4731_04410;Note=frameshifted;gbkey=CDS;gene=mltC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017803479.1;locus_tag=J4731_04410;product=membrane-bound lytic murein transglycosylase MltC;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	gene	303785	304063	.	-	.	ID=gene-J4731_04415;Name=J4731_04415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_04415
JAGETS010000007.1	Protein Homology	CDS	303785	304063	.	-	0	ID=cds-MBO1928774.1;Parent=gene-J4731_04415;Dbxref=NCBI_GP:MBO1928774.1;Name=MBO1928774.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004171987.1;locus_tag=J4731_04415;product=oxidative damage protection protein;protein_id=MBO1928774.1;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	304090	305115	.	-	.	ID=gene-J4731_04420;Name=mutY;gbkey=Gene;gene=mutY;gene_biotype=pseudogene;locus_tag=J4731_04420;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	304090	305115	.	-	0	ID=cds-J4731_04420;Parent=gene-J4731_04420;Note=frameshifted;gbkey=CDS;gene=mutY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006662649.1;locus_tag=J4731_04420;product=A/G-specific adenine glycosylase;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	305413	306109	.	+	.	ID=gene-J4731_04425;Name=trmB;gbkey=Gene;gene=trmB;gene_biotype=pseudogene;locus_tag=J4731_04425;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	305413	306109	.	+	0	ID=cds-J4731_04425;Parent=gene-J4731_04425;Note=frameshifted;gbkey=CDS;gene=trmB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004923278.1;locus_tag=J4731_04425;product=tRNA (guanosine(46)-N7)-methyltransferase TrmB;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	306109	306440	.	+	.	ID=gene-J4731_04430;Name=J4731_04430;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_04430;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	306109	306440	.	+	0	ID=cds-J4731_04430;Parent=gene-J4731_04430;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006657368.1;locus_tag=J4731_04430;product=DUF469 family protein;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	306541	307456	.	+	.	ID=gene-J4731_04435;Name=glsB;gbkey=Gene;gene=glsB;gene_biotype=pseudogene;locus_tag=J4731_04435;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	306541	307456	.	+	0	ID=cds-J4731_04435;Parent=gene-J4731_04435;Note=frameshifted%3B internal stop;gbkey=CDS;gene=glsB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012367555.1;locus_tag=J4731_04435;product=glutaminase B;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	307480	308197	.	+	.	ID=gene-J4731_04440;Name=J4731_04440;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_04440;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	307480	308197	.	+	0	ID=cds-J4731_04440;Parent=gene-J4731_04440;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006657370.1;locus_tag=J4731_04440;product=DUF2884 family protein;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	308409	309358	.	+	.	ID=gene-J4731_04445;Name=J4731_04445;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_04445;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	308409	309358	.	+	0	ID=cds-J4731_04445;Parent=gene-J4731_04445;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006657371.1;locus_tag=J4731_04445;product=ABC transporter substrate-binding protein;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	309496	310594	.	-	.	ID=gene-J4731_04450;Name=hemW;gbkey=Gene;gene=hemW;gene_biotype=pseudogene;locus_tag=J4731_04450;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	309496	310594	.	-	0	ID=cds-J4731_04450;Parent=gene-J4731_04450;Note=frameshifted%3B internal stop;gbkey=CDS;gene=hemW;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001465988.1;locus_tag=J4731_04450;product=radical SAM family heme chaperone HemW;pseudo=true;transl_table=11
JAGETS010000007.1	Genbank	pseudogene	310595	311101	.	-	.	ID=gene-J4731_04455;Name=J4731_04455;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_04455;pseudo=true
JAGETS010000007.1	Protein Homology	CDS	310595	311101	.	-	0	ID=cds-J4731_04455;Parent=gene-J4731_04455;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006815650.1;locus_tag=J4731_04455;product=non-canonical purine NTP pyrophosphatase;pseudo=true;transl_table=11
##sequence-region JAGETS010000070.1 1 48572
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=587
JAGETS010000070.1	Genbank	region	1	48572	.	+	.	ID=JAGETS010000070.1:1..48572;Dbxref=taxon:587;collected-by=NHLS;collection-date=2018;country=South Africa: Pretoria;gbkey=Src;isolation-source=stool;lat-lon=25.7479 S 28.2293 E;mol_type=genomic DNA;nat-host=porcine;strain=SG003
JAGETS010000070.1	Genbank	pseudogene	1	556	.	-	.	ID=gene-J4731_20655;Name=torT;gbkey=Gene;gene=torT;gene_biotype=pseudogene;locus_tag=J4731_20655;pseudo=true
JAGETS010000070.1	Protein Homology	CDS	1	556	.	-	0	ID=cds-J4731_20655;Parent=gene-J4731_20655;Note=frameshifted%3B incomplete%3B missing C-terminus;gbkey=CDS;gene=torT;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004262354.1;locus_tag=J4731_20655;product=TMAO reductase system periplasmic protein TorT;pseudo=true;transl_table=11
JAGETS010000070.1	Genbank	pseudogene	667	3328	.	+	.	ID=gene-J4731_20660;Name=torS;gbkey=Gene;gene=torS;gene_biotype=pseudogene;locus_tag=J4731_20660;pseudo=true
JAGETS010000070.1	Protein Homology	CDS	667	3328	.	+	0	ID=cds-J4731_20660;Parent=gene-J4731_20660;Note=frameshifted%3B internal stop;gbkey=CDS;gene=torS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001054726.1;locus_tag=J4731_20660;product=TMAO reductase system sensor histidine kinase/response regulator TorS;pseudo=true;transl_table=11
JAGETS010000070.1	Genbank	pseudogene	3388	4449	.	-	.	ID=gene-J4731_20665;Name=cfa;gbkey=Gene;gene=cfa;gene_biotype=pseudogene;locus_tag=J4731_20665;pseudo=true
JAGETS010000070.1	Protein Homology	CDS	3388	4449	.	-	0	ID=cds-J4731_20665;Parent=gene-J4731_20665;Note=frameshifted;gbkey=CDS;gene=cfa;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017802176.1;locus_tag=J4731_20665;product=cyclopropane fatty acyl phospholipid synthase;pseudo=true;transl_table=11
JAGETS010000070.1	Genbank	pseudogene	4996	6284	.	-	.	ID=gene-J4731_20670;Name=J4731_20670;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_20670;pseudo=true
JAGETS010000070.1	Protein Homology	CDS	4996	6284	.	-	0	ID=cds-J4731_20670;Parent=gene-J4731_20670;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004262340.1;locus_tag=J4731_20670;product=cytosine deaminase;pseudo=true;transl_table=11
JAGETS010000070.1	Genbank	pseudogene	6277	7507	.	-	.	ID=gene-J4731_20675;Name=codB;gbkey=Gene;gene=codB;gene_biotype=pseudogene;locus_tag=J4731_20675;pseudo=true
JAGETS010000070.1	Protein Homology	CDS	6277	7507	.	-	0	ID=cds-J4731_20675;Parent=gene-J4731_20675;Note=frameshifted;gbkey=CDS;gene=codB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004243213.1;locus_tag=J4731_20675;product=cytosine permease;pseudo=true;transl_table=11
JAGETS010000070.1	Genbank	pseudogene	7663	8538	.	-	.	ID=gene-J4731_20680;Name=J4731_20680;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_20680;pseudo=true
JAGETS010000070.1	Protein Homology	CDS	7663	8538	.	-	0	ID=cds-J4731_20680;Parent=gene-J4731_20680;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017892018.1;locus_tag=J4731_20680;product=LysR family transcriptional regulator;pseudo=true;transl_table=11
JAGETS010000070.1	Genbank	pseudogene	9135	10503	.	-	.	ID=gene-J4731_20685;Name=dbpA;gbkey=Gene;gene=dbpA;gene_biotype=pseudogene;locus_tag=J4731_20685;pseudo=true
JAGETS010000070.1	Protein Homology	CDS	9135	10503	.	-	0	ID=cds-J4731_20685;Parent=gene-J4731_20685;Note=frameshifted;gbkey=CDS;gene=dbpA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012769739.1;locus_tag=J4731_20685;product=ATP-dependent RNA helicase DbpA;pseudo=true;transl_table=11
JAGETS010000070.1	Genbank	gene	10647	10961	.	+	.	ID=gene-J4731_20690;Name=J4731_20690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_20690
JAGETS010000070.1	GeneMarkS-2+	CDS	10647	10961	.	+	0	ID=cds-MBO1929697.1;Parent=gene-J4731_20690;Dbxref=NCBI_GP:MBO1929697.1;Name=MBO1929697.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_20690;product=hypothetical protein;protein_id=MBO1929697.1;transl_table=11
JAGETS010000070.1	Genbank	gene	10958	11134	.	+	.	ID=gene-J4731_20695;Name=J4731_20695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_20695
JAGETS010000070.1	GeneMarkS-2+	CDS	10958	11134	.	+	0	ID=cds-MBO1929698.1;Parent=gene-J4731_20695;Dbxref=NCBI_GP:MBO1929698.1;Name=MBO1929698.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_20695;product=hypothetical protein;protein_id=MBO1929698.1;transl_table=11
JAGETS010000070.1	Genbank	pseudogene	11209	12641	.	-	.	ID=gene-J4731_20700;Name=J4731_20700;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_20700;pseudo=true
JAGETS010000070.1	Protein Homology	CDS	11209	12641	.	-	0	ID=cds-J4731_20700;Parent=gene-J4731_20700;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006658776.1;locus_tag=J4731_20700;product=YfcC family protein;pseudo=true;transl_table=11
JAGETS010000070.1	Genbank	pseudogene	12665	13762	.	-	.	ID=gene-J4731_20705;Name=J4731_20705;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_20705;pseudo=true
JAGETS010000070.1	Protein Homology	CDS	12665	13762	.	-	0	ID=cds-J4731_20705;Parent=gene-J4731_20705;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004249978.1;locus_tag=J4731_20705;product=M20/M25/M40 family metallo-hydrolase;pseudo=true;transl_table=11
JAGETS010000070.1	Genbank	pseudogene	14974	16106	.	+	.	ID=gene-J4731_20710;Name=J4731_20710;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_20710;pseudo=true
JAGETS010000070.1	Protein Homology	CDS	14974	16106	.	+	0	ID=cds-J4731_20710;Parent=gene-J4731_20710;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004237924.1;locus_tag=J4731_20710;product=aminotransferase class V-fold PLP-dependent enzyme;pseudo=true;transl_table=11
JAGETS010000070.1	Genbank	pseudogene	16182	17555	.	+	.	ID=gene-J4731_20715;Name=J4731_20715;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_20715;pseudo=true
JAGETS010000070.1	Protein Homology	CDS	16182	17555	.	+	0	ID=cds-J4731_20715;Parent=gene-J4731_20715;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004237923.1;locus_tag=J4731_20715;product=sodium:proton antiporter;pseudo=true;transl_table=11
JAGETS010000070.1	Genbank	gene	17801	17998	.	+	.	ID=gene-J4731_20720;Name=J4731_20720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_20720
JAGETS010000070.1	Protein Homology	CDS	17801	17998	.	+	0	ID=cds-MBO1929699.1;Parent=gene-J4731_20720;Dbxref=NCBI_GP:MBO1929699.1;Name=MBO1929699.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013237.1;locus_tag=J4731_20720;product=PLP-dependent transferase;protein_id=MBO1929699.1;transl_table=11
JAGETS010000070.1	Genbank	gene	17986	18372	.	+	.	ID=gene-J4731_20725;Name=J4731_20725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_20725
JAGETS010000070.1	Protein Homology	CDS	17986	18372	.	+	0	ID=cds-MBO1929700.1;Parent=gene-J4731_20725;Dbxref=NCBI_GP:MBO1929700.1;Name=MBO1929700.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012488.1;locus_tag=J4731_20725;product=aminotransferase class V-fold PLP-dependent enzyme;protein_id=MBO1929700.1;transl_table=11
JAGETS010000070.1	Genbank	gene	18369	18593	.	+	.	ID=gene-J4731_20730;Name=J4731_20730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_20730
JAGETS010000070.1	Protein Homology	CDS	18369	18593	.	+	0	ID=cds-MBO1929701.1;Parent=gene-J4731_20730;Dbxref=NCBI_GP:MBO1929701.1;Name=MBO1929701.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013237.1;locus_tag=J4731_20730;product=PLP-dependent transferase;protein_id=MBO1929701.1;transl_table=11
JAGETS010000070.1	Genbank	gene	18611	18694	.	+	.	ID=gene-J4731_20735;Name=J4731_20735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_20735
JAGETS010000070.1	Protein Homology	CDS	18611	18694	.	+	0	ID=cds-MBO1929702.1;Parent=gene-J4731_20735;Dbxref=NCBI_GP:MBO1929702.1;Name=MBO1929702.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013237.1;locus_tag=J4731_20735;product=hypothetical protein;protein_id=MBO1929702.1;transl_table=11
JAGETS010000070.1	Genbank	gene	18706	18903	.	+	.	ID=gene-J4731_20740;Name=J4731_20740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_20740
JAGETS010000070.1	Protein Homology	CDS	18706	18903	.	+	0	ID=cds-MBO1929703.1;Parent=gene-J4731_20740;Dbxref=NCBI_GP:MBO1929703.1;Name=MBO1929703.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013237.1;locus_tag=J4731_20740;product=PLP-dependent transferase;protein_id=MBO1929703.1;transl_table=11
JAGETS010000070.1	Genbank	gene	19048	19674	.	-	.	ID=gene-J4731_20745;Name=dmsD;gbkey=Gene;gene=dmsD;gene_biotype=protein_coding;locus_tag=J4731_20745
JAGETS010000070.1	Protein Homology	CDS	19048	19674	.	-	0	ID=cds-MBO1929704.1;Parent=gene-J4731_20745;Dbxref=NCBI_GP:MBO1929704.1;Name=MBO1929704.1;gbkey=CDS;gene=dmsD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004262297.1;locus_tag=J4731_20745;product=Tat proofreading chaperone DmsD;protein_id=MBO1929704.1;transl_table=11
JAGETS010000070.1	Genbank	pseudogene	19785	20640	.	-	.	ID=gene-J4731_20750;Name=J4731_20750;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_20750;pseudo=true
JAGETS010000070.1	Protein Homology	CDS	19785	20640	.	-	0	ID=cds-J4731_20750;Parent=gene-J4731_20750;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004262296.1;locus_tag=J4731_20750;product=dimethyl sulfoxide reductase anchor subunit family protein;pseudo=true;transl_table=11
JAGETS010000070.1	Genbank	pseudogene	20642	21258	.	-	.	ID=gene-J4731_20755;Name=dmsB;gbkey=Gene;gene=dmsB;gene_biotype=pseudogene;locus_tag=J4731_20755;pseudo=true
JAGETS010000070.1	Protein Homology	CDS	20642	21258	.	-	0	ID=cds-J4731_20755;Parent=gene-J4731_20755;Note=frameshifted;gbkey=CDS;gene=dmsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310322.1;locus_tag=J4731_20755;product=dimethylsulfoxide reductase subunit B;pseudo=true;transl_table=11
JAGETS010000070.1	Genbank	pseudogene	21269	23708	.	-	.	ID=gene-J4731_20760;Name=J4731_20760;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_20760;pseudo=true
JAGETS010000070.1	Protein Homology	CDS	21269	23708	.	-	0	ID=cds-J4731_20760;Parent=gene-J4731_20760;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016506855.1;locus_tag=J4731_20760;product=molybdopterin-dependent oxidoreductase;pseudo=true;transl_table=11
JAGETS010000070.1	Genbank	gene	24212	24493	.	-	.	ID=gene-J4731_20765;Name=J4731_20765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_20765
JAGETS010000070.1	Protein Homology	CDS	24212	24493	.	-	0	ID=cds-MBO1929705.1;Parent=gene-J4731_20765;Dbxref=NCBI_GP:MBO1929705.1;Name=MBO1929705.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024503.1;locus_tag=J4731_20765;product=TonB family protein;protein_id=MBO1929705.1;transl_table=11
JAGETS010000070.1	Genbank	gene	24424	24666	.	-	.	ID=gene-J4731_20770;Name=J4731_20770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_20770
JAGETS010000070.1	GeneMarkS-2+	CDS	24424	24666	.	-	0	ID=cds-MBO1929706.1;Parent=gene-J4731_20770;Dbxref=NCBI_GP:MBO1929706.1;Name=MBO1929706.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_20770;product=hypothetical protein;protein_id=MBO1929706.1;transl_table=11
JAGETS010000070.1	Genbank	pseudogene	25294	25790	.	-	.	ID=gene-J4731_20775;Name=J4731_20775;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_20775;pseudo=true
JAGETS010000070.1	Protein Homology	CDS	25294	25790	.	-	0	ID=cds-J4731_20775;Parent=gene-J4731_20775;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001163400.1;locus_tag=J4731_20775;product=multidrug/biocide efflux PACE transporter;pseudo=true;transl_table=11
JAGETS010000070.1	Genbank	pseudogene	25870	26719	.	+	.	ID=gene-J4731_20780;Name=J4731_20780;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_20780;pseudo=true
JAGETS010000070.1	Protein Homology	CDS	25870	26719	.	+	0	ID=cds-J4731_20780;Parent=gene-J4731_20780;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004262273.1;locus_tag=J4731_20780;product=LysR family transcriptional regulator;pseudo=true;transl_table=11
JAGETS010000070.1	Genbank	pseudogene	26949	27381	.	+	.	ID=gene-J4731_20785;Name=J4731_20785;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_20785;pseudo=true
JAGETS010000070.1	Protein Homology	CDS	26949	27381	.	+	0	ID=cds-J4731_20785;Parent=gene-J4731_20785;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008911616.1;locus_tag=J4731_20785;product=DUF4822 domain-containing protein;pseudo=true;transl_table=11
JAGETS010000070.1	Genbank	pseudogene	27448	28778	.	-	.	ID=gene-J4731_20790;Name=yegD;gbkey=Gene;gene=yegD;gene_biotype=pseudogene;locus_tag=J4731_20790;pseudo=true
JAGETS010000070.1	Protein Homology	CDS	27448	28778	.	-	0	ID=cds-J4731_20790;Parent=gene-J4731_20790;Note=frameshifted;gbkey=CDS;gene=yegD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006660685.1;locus_tag=J4731_20790;product=molecular chaperone;pseudo=true;transl_table=11
JAGETS010000070.1	Genbank	pseudogene	29096	29492	.	-	.	ID=gene-J4731_20795;Name=J4731_20795;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_20795;pseudo=true
JAGETS010000070.1	Protein Homology	CDS	29096	29492	.	-	0	ID=cds-J4731_20795;Parent=gene-J4731_20795;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004262270.1;locus_tag=J4731_20795;product=hypothetical protein;pseudo=true;transl_table=11
JAGETS010000070.1	Genbank	pseudogene	29768	30395	.	-	.	ID=gene-J4731_20800;Name=J4731_20800;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_20800;pseudo=true
JAGETS010000070.1	Protein Homology	CDS	29768	30395	.	-	0	ID=cds-J4731_20800;Parent=gene-J4731_20800;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005110942.1;locus_tag=J4731_20800;product=heme lyase NrfEFG subunit NrfG;pseudo=true;transl_table=11
JAGETS010000070.1	Genbank	pseudogene	30519	30824	.	-	.	ID=gene-J4731_20805;Name=J4731_20805;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_20805;pseudo=true
JAGETS010000070.1	Protein Homology	CDS	30519	30824	.	-	0	ID=cds-J4731_20805;Parent=gene-J4731_20805;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016155376.1;locus_tag=J4731_20805;product=cytochrome c-type biogenesis protein CcmH;pseudo=true;transl_table=11
JAGETS010000070.1	Genbank	pseudogene	30858	32691	.	-	.	ID=gene-J4731_20810;Name=nrfE;gbkey=Gene;gene=nrfE;gene_biotype=pseudogene;locus_tag=J4731_20810;pseudo=true
JAGETS010000070.1	Protein Homology	CDS	30858	32691	.	-	0	ID=cds-J4731_20810;Parent=gene-J4731_20810;Note=frameshifted;gbkey=CDS;gene=nrfE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011093448.1;locus_tag=J4731_20810;product=heme lyase NrfEFG subunit NrfE;pseudo=true;transl_table=11
JAGETS010000070.1	Genbank	pseudogene	32712	33652	.	-	.	ID=gene-J4731_20815;Name=nrfD;gbkey=Gene;gene=nrfD;gene_biotype=pseudogene;locus_tag=J4731_20815;pseudo=true
JAGETS010000070.1	Protein Homology	CDS	32712	33652	.	-	0	ID=cds-J4731_20815;Parent=gene-J4731_20815;Note=frameshifted%3B internal stop;gbkey=CDS;gene=nrfD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313082.1;locus_tag=J4731_20815;product=cytochrome c nitrite reductase subunit NrfD;pseudo=true;transl_table=11
JAGETS010000070.1	Genbank	pseudogene	33624	34303	.	-	.	ID=gene-J4731_20820;Name=J4731_20820;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_20820;pseudo=true
JAGETS010000070.1	Protein Homology	CDS	33624	34303	.	-	0	ID=cds-J4731_20820;Parent=gene-J4731_20820;Note=4Fe4S subunit%3B may be involved in the transfer of electrons from quinones to the c-type cytochromes%3B frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002445462.1;locus_tag=J4731_20820;product=cytochrome c nitrite reductase Fe-S protein;pseudo=true;transl_table=11
JAGETS010000070.1	Genbank	pseudogene	34323	34889	.	-	.	ID=gene-J4731_20825;Name=nrfB;gbkey=Gene;gene=nrfB;gene_biotype=pseudogene;locus_tag=J4731_20825;pseudo=true
JAGETS010000070.1	Protein Homology	CDS	34323	34889	.	-	0	ID=cds-J4731_20825;Parent=gene-J4731_20825;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;gene=nrfB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014656458.1;locus_tag=J4731_20825;product=cytochrome c nitrite reductase pentaheme subunit;pseudo=true;transl_table=11
JAGETS010000070.1	Genbank	pseudogene	34892	36311	.	-	.	ID=gene-J4731_20830;Name=nrfA;gbkey=Gene;gene=nrfA;gene_biotype=pseudogene;locus_tag=J4731_20830;pseudo=true
JAGETS010000070.1	Protein Homology	CDS	34892	36311	.	-	0	ID=cds-J4731_20830;Parent=gene-J4731_20830;Note=frameshifted%3B internal stop;gbkey=CDS;gene=nrfA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002435476.1;locus_tag=J4731_20830;product=ammonia-forming nitrite reductase cytochrome c552 subunit;pseudo=true;transl_table=11
JAGETS010000070.1	Genbank	pseudogene	37101	37585	.	+	.	ID=gene-J4731_20835;Name=napF;gbkey=Gene;gene=napF;gene_biotype=pseudogene;locus_tag=J4731_20835;pseudo=true
JAGETS010000070.1	Protein Homology	CDS	37101	37585	.	+	0	ID=cds-J4731_20835;Parent=gene-J4731_20835;Note=frameshifted;gbkey=CDS;gene=napF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006815072.1;locus_tag=J4731_20835;product=ferredoxin-type protein NapF;pseudo=true;transl_table=11
JAGETS010000070.1	Genbank	pseudogene	37833	38237	.	+	.	ID=gene-J4731_20840;Name=J4731_20840;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_20840;pseudo=true
JAGETS010000070.1	Protein Homology	CDS	37833	38237	.	+	0	ID=cds-J4731_20840;Parent=gene-J4731_20840;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001699813.1;locus_tag=J4731_20840;product=twin-arginine translocation signal domain-containing protein;pseudo=true;transl_table=11
JAGETS010000070.1	Genbank	gene	38273	38548	.	+	.	ID=gene-J4731_20845;Name=J4731_20845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_20845
JAGETS010000070.1	GeneMarkS-2+	CDS	38273	38548	.	+	0	ID=cds-MBO1929707.1;Parent=gene-J4731_20845;Dbxref=NCBI_GP:MBO1929707.1;Name=MBO1929707.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_20845;product=hypothetical protein;protein_id=MBO1929707.1;transl_table=11
JAGETS010000070.1	Genbank	gene	38776	39027	.	+	.	ID=gene-J4731_20850;Name=J4731_20850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_20850
JAGETS010000070.1	Protein Homology	CDS	38776	39027	.	+	0	ID=cds-MBO1929708.1;Parent=gene-J4731_20850;Dbxref=NCBI_GP:MBO1929708.1;Name=MBO1929708.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012602.1;locus_tag=J4731_20850;product=molybdopterin-dependent oxidoreductase;protein_id=MBO1929708.1;transl_table=11
JAGETS010000070.1	Genbank	gene	39046	39345	.	+	.	ID=gene-J4731_20855;Name=J4731_20855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_20855
JAGETS010000070.1	GeneMarkS-2+	CDS	39046	39345	.	+	0	ID=cds-MBO1929709.1;Parent=gene-J4731_20855;Dbxref=NCBI_GP:MBO1929709.1;Name=MBO1929709.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_20855;product=hypothetical protein;protein_id=MBO1929709.1;transl_table=11
JAGETS010000070.1	Genbank	gene	39383	39733	.	+	.	ID=gene-J4731_20860;Name=J4731_20860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_20860
JAGETS010000070.1	Protein Homology	CDS	39383	39733	.	+	0	ID=cds-MBO1929710.1;Parent=gene-J4731_20860;Dbxref=NCBI_GP:MBO1929710.1;Name=MBO1929710.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012602.1;locus_tag=J4731_20860;product=molybdopterin-dependent oxidoreductase;protein_id=MBO1929710.1;transl_table=11
JAGETS010000070.1	Genbank	gene	39774	39962	.	+	.	ID=gene-J4731_20865;Name=J4731_20865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_20865
JAGETS010000070.1	GeneMarkS-2+	CDS	39774	39962	.	+	0	ID=cds-MBO1929711.1;Parent=gene-J4731_20865;Dbxref=NCBI_GP:MBO1929711.1;Name=MBO1929711.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_20865;product=hypothetical protein;protein_id=MBO1929711.1;transl_table=11
JAGETS010000070.1	Genbank	gene	40030	40104	.	+	.	ID=gene-J4731_20870;Name=J4731_20870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_20870
JAGETS010000070.1	Protein Homology	CDS	40030	40104	.	+	0	ID=cds-MBO1929712.1;Parent=gene-J4731_20870;Dbxref=NCBI_GP:MBO1929712.1;Name=MBO1929712.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013717.1;locus_tag=J4731_20870;product=hypothetical protein;protein_id=MBO1929712.1;transl_table=11
JAGETS010000070.1	Genbank	pseudogene	40274	40975	.	+	.	ID=gene-J4731_20875;Name=napG;gbkey=Gene;gene=napG;gene_biotype=pseudogene;locus_tag=J4731_20875;pseudo=true
JAGETS010000070.1	Protein Homology	CDS	40274	40975	.	+	0	ID=cds-J4731_20875;Parent=gene-J4731_20875;Note=frameshifted;gbkey=CDS;gene=napG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311121.1;locus_tag=J4731_20875;product=ferredoxin-type protein NapG;pseudo=true;transl_table=11
JAGETS010000070.1	Genbank	pseudogene	40962	41817	.	+	.	ID=gene-J4731_20880;Name=napH;gbkey=Gene;gene=napH;gene_biotype=pseudogene;locus_tag=J4731_20880;pseudo=true
JAGETS010000070.1	Protein Homology	CDS	40962	41817	.	+	0	ID=cds-J4731_20880;Parent=gene-J4731_20880;Note=frameshifted;gbkey=CDS;gene=napH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003839440.1;locus_tag=J4731_20880;product=quinol dehydrogenase ferredoxin subunit NapH;pseudo=true;transl_table=11
JAGETS010000070.1	Genbank	pseudogene	41970	42274	.	+	.	ID=gene-J4731_20885;Name=J4731_20885;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_20885;pseudo=true
JAGETS010000070.1	Protein Homology	CDS	41970	42274	.	+	0	ID=cds-J4731_20885;Parent=gene-J4731_20885;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017373389.1;locus_tag=J4731_20885;product=nitrate reductase cytochrome c-type subunit;pseudo=true;transl_table=11
JAGETS010000070.1	Genbank	pseudogene	42247	42879	.	+	.	ID=gene-J4731_20890;Name=napC;gbkey=Gene;gene=napC;gene_biotype=pseudogene;locus_tag=J4731_20890;pseudo=true
JAGETS010000070.1	Protein Homology	CDS	42247	42879	.	+	0	ID=cds-J4731_20890;Parent=gene-J4731_20890;Note=frameshifted;gbkey=CDS;gene=napC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004092041.1;locus_tag=J4731_20890;product=cytochrome c-type protein NapC;pseudo=true;transl_table=11
JAGETS010000070.1	Genbank	pseudogene	43075	43812	.	+	.	ID=gene-J4731_20895;Name=ccsA;gbkey=Gene;gene=ccsA;gene_biotype=pseudogene;locus_tag=J4731_20895;pseudo=true
JAGETS010000070.1	Protein Homology	CDS	43075	43812	.	+	0	ID=cds-J4731_20895;Parent=gene-J4731_20895;Note=frameshifted;gbkey=CDS;gene=ccsA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006660701.1;locus_tag=J4731_20895;product=cytochrome c biogenesis protein CcsA;pseudo=true;transl_table=11
JAGETS010000070.1	Genbank	gene	43830	44483	.	+	.	ID=gene-J4731_20900;Name=J4731_20900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_20900
JAGETS010000070.1	Protein Homology	CDS	43830	44483	.	+	0	ID=cds-MBO1929713.1;Parent=gene-J4731_20900;Dbxref=NCBI_GP:MBO1929713.1;Name=MBO1929713.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015085.1;locus_tag=J4731_20900;product=cytochrome c maturation protein CcmE;protein_id=MBO1929713.1;transl_table=11
JAGETS010000070.1	Genbank	pseudogene	44487	46402	.	+	.	ID=gene-J4731_20905;Name=J4731_20905;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_20905;pseudo=true
JAGETS010000070.1	Protein Homology	CDS	44487	46402	.	+	0	ID=cds-J4731_20905;Parent=gene-J4731_20905;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005102995.1;locus_tag=J4731_20905;product=heme lyase CcmF/NrfE family subunit;pseudo=true;transl_table=11
JAGETS010000070.1	Genbank	pseudogene	46399	46953	.	+	.	ID=gene-J4731_20910;Name=J4731_20910;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_20910;pseudo=true
JAGETS010000070.1	Protein Homology	CDS	46399	46953	.	+	0	ID=cds-J4731_20910;Parent=gene-J4731_20910;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311111.1;locus_tag=J4731_20910;product=DsbE family thiol:disulfide interchange protein;pseudo=true;transl_table=11
JAGETS010000070.1	Genbank	pseudogene	46950	48012	.	+	.	ID=gene-J4731_20915;Name=J4731_20915;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_20915;pseudo=true
JAGETS010000070.1	Protein Homology	CDS	46950	48012	.	+	0	ID=cds-J4731_20915;Parent=gene-J4731_20915;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004262201.1;locus_tag=J4731_20915;product=cytochrome c-type biogenesis protein CcmH;pseudo=true;transl_table=11
##sequence-region JAGETS010000071.1 1 38967
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=587
JAGETS010000071.1	Genbank	region	1	38967	.	+	.	ID=JAGETS010000071.1:1..38967;Dbxref=taxon:587;collected-by=NHLS;collection-date=2018;country=South Africa: Pretoria;gbkey=Src;isolation-source=stool;lat-lon=25.7479 S 28.2293 E;mol_type=genomic DNA;nat-host=porcine;strain=SG003
JAGETS010000071.1	Genbank	gene	560	829	.	-	.	ID=gene-J4731_20920;Name=J4731_20920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_20920
JAGETS010000071.1	GeneMarkS-2+	CDS	560	829	.	-	0	ID=cds-MBO1929714.1;Parent=gene-J4731_20920;Dbxref=NCBI_GP:MBO1929714.1;Name=MBO1929714.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_20920;product=hypothetical protein;protein_id=MBO1929714.1;transl_table=11
JAGETS010000071.1	Genbank	pseudogene	2188	2625	.	-	.	ID=gene-J4731_20925;Name=J4731_20925;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_20925;pseudo=true
JAGETS010000071.1	Protein Homology	CDS	2188	2625	.	-	0	ID=cds-J4731_20925;Parent=gene-J4731_20925;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006659714.1;locus_tag=J4731_20925;product=hypothetical protein;pseudo=true;transl_table=11
JAGETS010000071.1	Genbank	pseudogene	2625	3914	.	-	.	ID=gene-J4731_20930;Name=sctN;gbkey=Gene;gene=sctN;gene_biotype=pseudogene;locus_tag=J4731_20930;pseudo=true
JAGETS010000071.1	Protein Homology	CDS	2625	3914	.	-	0	ID=cds-J4731_20930;Parent=gene-J4731_20930;Note=frameshifted;gbkey=CDS;gene=sctN;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006663139.1;locus_tag=J4731_20930;product=type III secretion system ATPase SctN;pseudo=true;transl_table=11
JAGETS010000071.1	Genbank	gene	3921	4325	.	-	.	ID=gene-J4731_20935;Name=J4731_20935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_20935
JAGETS010000071.1	Protein Homology	CDS	3921	4325	.	-	0	ID=cds-MBO1929715.1;Parent=gene-J4731_20935;Dbxref=NCBI_GP:MBO1929715.1;Name=MBO1929715.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004263026.1;locus_tag=J4731_20935;product=type III secretion system protein;protein_id=MBO1929715.1;transl_table=11
JAGETS010000071.1	Genbank	pseudogene	4606	5056	.	-	.	ID=gene-J4731_20940;Name=J4731_20940;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_20940;pseudo=true
JAGETS010000071.1	Protein Homology	CDS	4606	5056	.	-	0	ID=cds-J4731_20940;Parent=gene-J4731_20940;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006122203.1;locus_tag=J4731_20940;product=FHIPEP family type III secretion protein;pseudo=true;transl_table=11
JAGETS010000071.1	Genbank	gene	5237	5611	.	-	.	ID=gene-J4731_20945;Name=J4731_20945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_20945
JAGETS010000071.1	GeneMarkS-2+	CDS	5237	5611	.	-	0	ID=cds-MBO1929716.1;Parent=gene-J4731_20945;Dbxref=NCBI_GP:MBO1929716.1;Name=MBO1929716.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_20945;product=hypothetical protein;protein_id=MBO1929716.1;transl_table=11
JAGETS010000071.1	Genbank	pseudogene	5517	6423	.	-	.	ID=gene-J4731_20950;Name=J4731_20950;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_20950;pseudo=true
JAGETS010000071.1	Protein Homology	CDS	5517	6423	.	-	0	ID=cds-J4731_20950;Parent=gene-J4731_20950;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000616104.1;locus_tag=J4731_20950;product=FHIPEP family type III secretion protein;pseudo=true;transl_table=11
JAGETS010000071.1	Genbank	pseudogene	6470	7586	.	-	.	ID=gene-J4731_20955;Name=sctW;gbkey=Gene;gene=sctW;gene_biotype=pseudogene;locus_tag=J4731_20955;pseudo=true
JAGETS010000071.1	Protein Homology	CDS	6470	7586	.	-	0	ID=cds-J4731_20955;Parent=gene-J4731_20955;Note=frameshifted%3B internal stop;gbkey=CDS;gene=sctW;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004926232.1;locus_tag=J4731_20955;product=type III secretion system gatekeeper subunit SctW;pseudo=true;transl_table=11
JAGETS010000071.1	Genbank	pseudogene	7577	9242	.	-	.	ID=gene-J4731_20960;Name=sctC;gbkey=Gene;gene=sctC;gene_biotype=pseudogene;locus_tag=J4731_20960;pseudo=true
JAGETS010000071.1	Protein Homology	CDS	7577	9242	.	-	0	ID=cds-J4731_20960;Parent=gene-J4731_20960;Note=frameshifted;gbkey=CDS;gene=sctC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004703634.1;locus_tag=J4731_20960;product=type III secretion system outer membrane ring subunit SctC;pseudo=true;transl_table=11
JAGETS010000071.1	Genbank	pseudogene	9251	10024	.	-	.	ID=gene-J4731_20965;Name=J4731_20965;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_20965;pseudo=true
JAGETS010000071.1	Protein Homology	CDS	9251	10024	.	-	0	ID=cds-J4731_20965;Parent=gene-J4731_20965;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006663141.1;locus_tag=J4731_20965;product=helix-turn-helix domain-containing protein;pseudo=true;transl_table=11
JAGETS010000071.1	Genbank	gene	10299	10565	.	+	.	ID=gene-J4731_20970;Name=J4731_20970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_20970
JAGETS010000071.1	GeneMarkS-2+	CDS	10299	10565	.	+	0	ID=cds-MBO1929717.1;Parent=gene-J4731_20970;Dbxref=NCBI_GP:MBO1929717.1;Name=MBO1929717.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_20970;product=hypothetical protein;protein_id=MBO1929717.1;transl_table=11
JAGETS010000071.1	Genbank	gene	10806	11096	.	+	.	ID=gene-J4731_20975;Name=J4731_20975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_20975
JAGETS010000071.1	Protein Homology	CDS	10806	11096	.	+	0	ID=cds-MBO1929718.1;Parent=gene-J4731_20975;Dbxref=NCBI_GP:MBO1929718.1;Name=MBO1929718.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021029.1;locus_tag=J4731_20975;product=hypothetical protein;protein_id=MBO1929718.1;transl_table=11
JAGETS010000071.1	Genbank	gene	11234	11464	.	+	.	ID=gene-J4731_20980;Name=J4731_20980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_20980
JAGETS010000071.1	Protein Homology	CDS	11234	11464	.	+	0	ID=cds-MBO1929719.1;Parent=gene-J4731_20980;Dbxref=NCBI_GP:MBO1929719.1;Name=MBO1929719.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021029.1;locus_tag=J4731_20980;product=hypothetical protein;protein_id=MBO1929719.1;transl_table=11
JAGETS010000071.1	Genbank	pseudogene	11489	11796	.	+	.	ID=gene-J4731_20985;Name=J4731_20985;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_20985;pseudo=true
JAGETS010000071.1	Protein Homology	CDS	11489	11796	.	+	0	ID=cds-J4731_20985;Parent=gene-J4731_20985;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004926220.1;locus_tag=J4731_20985;product=type III secretion apparatus needle protein;pseudo=true;transl_table=11
JAGETS010000071.1	Genbank	gene	11850	12146	.	+	.	ID=gene-J4731_20990;Name=sctI;gbkey=Gene;gene=sctI;gene_biotype=protein_coding;locus_tag=J4731_20990
JAGETS010000071.1	Protein Homology	CDS	11850	12146	.	+	0	ID=cds-MBO1929720.1;Parent=gene-J4731_20990;Dbxref=NCBI_GP:MBO1929720.1;Name=MBO1929720.1;gbkey=CDS;gene=sctI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004263051.1;locus_tag=J4731_20990;product=type III secretion system inner rod subunit SctI;protein_id=MBO1929720.1;transl_table=11
JAGETS010000071.1	Genbank	gene	12150	12866	.	+	.	ID=gene-J4731_20995;Name=sctJ;gbkey=Gene;gene=sctJ;gene_biotype=protein_coding;locus_tag=J4731_20995
JAGETS010000071.1	Protein Homology	CDS	12150	12866	.	+	0	ID=cds-MBO1929721.1;Parent=gene-J4731_20995;Dbxref=NCBI_GP:MBO1929721.1;Name=MBO1929721.1;gbkey=CDS;gene=sctJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004874014.1;locus_tag=J4731_20995;product=type III secretion inner membrane ring lipoprotein SctJ;protein_id=MBO1929721.1;transl_table=11
JAGETS010000071.1	Genbank	pseudogene	12882	13416	.	+	.	ID=gene-J4731_21000;Name=J4731_21000;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_21000;pseudo=true
JAGETS010000071.1	Protein Homology	CDS	12882	13416	.	+	0	ID=cds-J4731_21000;Parent=gene-J4731_21000;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004263060.1;locus_tag=J4731_21000;product=hypothetical protein;pseudo=true;transl_table=11
JAGETS010000071.1	Genbank	gene	13527	13970	.	+	.	ID=gene-J4731_21005;Name=J4731_21005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_21005
JAGETS010000071.1	GeneMarkS-2+	CDS	13527	13970	.	+	0	ID=cds-MBO1929722.1;Parent=gene-J4731_21005;Dbxref=NCBI_GP:MBO1929722.1;Name=MBO1929722.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_21005;product=hypothetical protein;protein_id=MBO1929722.1;transl_table=11
JAGETS010000071.1	Genbank	gene	14036	14386	.	+	.	ID=gene-J4731_21010;Name=J4731_21010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_21010
JAGETS010000071.1	GeneMarkS-2+	CDS	14036	14386	.	+	0	ID=cds-MBO1929723.1;Parent=gene-J4731_21010;Dbxref=NCBI_GP:MBO1929723.1;Name=MBO1929723.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_21010;product=hypothetical protein;protein_id=MBO1929723.1;transl_table=11
JAGETS010000071.1	Genbank	gene	15374	15712	.	+	.	ID=gene-J4731_21015;Name=J4731_21015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_21015
JAGETS010000071.1	Protein Homology	CDS	15374	15712	.	+	0	ID=cds-MBO1929724.1;Parent=gene-J4731_21015;Dbxref=NCBI_GP:MBO1929724.1;Name=MBO1929724.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021158.1;locus_tag=J4731_21015;product=YbaY family lipoprotein;protein_id=MBO1929724.1;transl_table=11
JAGETS010000071.1	Genbank	gene	15830	16234	.	-	.	ID=gene-J4731_21020;Name=J4731_21020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_21020
JAGETS010000071.1	Protein Homology	CDS	15830	16234	.	-	0	ID=cds-MBO1929725.1;Parent=gene-J4731_21020;Dbxref=NCBI_GP:MBO1929725.1;Name=MBO1929725.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004924091.1;locus_tag=J4731_21020;product=winged helix-turn-helix transcriptional regulator;protein_id=MBO1929725.1;transl_table=11
JAGETS010000071.1	Genbank	pseudogene	16397	18217	.	+	.	ID=gene-J4731_21025;Name=J4731_21025;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_21025;pseudo=true
JAGETS010000071.1	Protein Homology	CDS	16397	18217	.	+	0	ID=cds-J4731_21025;Parent=gene-J4731_21025;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004924088.1;locus_tag=J4731_21025;product=FUSC family protein;pseudo=true;transl_table=11
JAGETS010000071.1	Genbank	pseudogene	18257	19767	.	-	.	ID=gene-J4731_21030;Name=norR;gbkey=Gene;gene=norR;gene_biotype=pseudogene;locus_tag=J4731_21030;pseudo=true
JAGETS010000071.1	Protein Homology	CDS	18257	19767	.	-	0	ID=cds-J4731_21030;Parent=gene-J4731_21030;Note=frameshifted;gbkey=CDS;gene=norR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461760.1;locus_tag=J4731_21030;product=nitric oxide reductase transcriptional regulator NorR;pseudo=true;transl_table=11
JAGETS010000071.1	Genbank	pseudogene	19971	21137	.	+	.	ID=gene-J4731_21035;Name=norV;gbkey=Gene;gene=norV;gene_biotype=pseudogene;locus_tag=J4731_21035;pseudo=true
JAGETS010000071.1	Protein Homology	CDS	19971	21137	.	+	0	ID=cds-J4731_21035;Parent=gene-J4731_21035;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;gene=norV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461761.1;locus_tag=J4731_21035;product=anaerobic nitric oxide reductase flavorubredoxin;pseudo=true;transl_table=11
JAGETS010000071.1	Genbank	gene	21199	21864	.	+	.	ID=gene-J4731_21040;Name=ytfE;gbkey=Gene;gene=ytfE;gene_biotype=protein_coding;locus_tag=J4731_21040
JAGETS010000071.1	Protein Homology	CDS	21199	21864	.	+	0	ID=cds-MBO1929726.1;Parent=gene-J4731_21040;Dbxref=NCBI_GP:MBO1929726.1;Name=MBO1929726.1;gbkey=CDS;gene=ytfE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418630.1;locus_tag=J4731_21040;product=iron-sulfur cluster repair protein YtfE;protein_id=MBO1929726.1;transl_table=11
JAGETS010000071.1	Genbank	pseudogene	21930	23298	.	-	.	ID=gene-J4731_21045;Name=J4731_21045;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_21045;pseudo=true
JAGETS010000071.1	Protein Homology	CDS	21930	23298	.	-	0	ID=cds-J4731_21045;Parent=gene-J4731_21045;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246680.1;locus_tag=J4731_21045;product=adenylosuccinate lyase family protein;pseudo=true;transl_table=11
JAGETS010000071.1	Genbank	pseudogene	23313	24903	.	-	.	ID=gene-J4731_21050;Name=J4731_21050;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_21050;pseudo=true
JAGETS010000071.1	Protein Homology	CDS	23313	24903	.	-	0	ID=cds-J4731_21050;Parent=gene-J4731_21050;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006814354.1;locus_tag=J4731_21050;product=PTS transporter subunit EIIC;pseudo=true;transl_table=11
JAGETS010000071.1	Genbank	pseudogene	25056	25784	.	-	.	ID=gene-J4731_21055;Name=J4731_21055;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_21055;pseudo=true
JAGETS010000071.1	Protein Homology	CDS	25056	25784	.	-	0	ID=cds-J4731_21055;Parent=gene-J4731_21055;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006658526.1;locus_tag=J4731_21055;product=MurR/RpiR family transcriptional regulator;pseudo=true;transl_table=11
JAGETS010000071.1	Genbank	pseudogene	25894	26374	.	-	.	ID=gene-J4731_21060;Name=J4731_21060;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_21060;pseudo=true
JAGETS010000071.1	Protein Homology	CDS	25894	26374	.	-	0	ID=cds-J4731_21060;Parent=gene-J4731_21060;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004263097.1;locus_tag=J4731_21060;product=cold shock domain-containing protein;pseudo=true;transl_table=11
JAGETS010000071.1	Genbank	pseudogene	26555	27246	.	+	.	ID=gene-J4731_21065;Name=J4731_21065;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_21065;pseudo=true
JAGETS010000071.1	Protein Homology	CDS	26555	27246	.	+	0	ID=cds-J4731_21065;Parent=gene-J4731_21065;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004952562.1;locus_tag=J4731_21065;product=RluA family pseudouridine synthase;pseudo=true;transl_table=11
JAGETS010000071.1	Genbank	pseudogene	27279	27815	.	-	.	ID=gene-J4731_21070;Name=J4731_21070;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_21070;pseudo=true
JAGETS010000071.1	Protein Homology	CDS	27279	27815	.	-	0	ID=cds-J4731_21070;Parent=gene-J4731_21070;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463057.1;locus_tag=J4731_21070;product=DUF2058 domain-containing protein;pseudo=true;transl_table=11
JAGETS010000071.1	Genbank	pseudogene	28103	29125	.	-	.	ID=gene-J4731_21075;Name=J4731_21075;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_21075;pseudo=true
JAGETS010000071.1	Protein Homology	CDS	28103	29125	.	-	0	ID=cds-J4731_21075;Parent=gene-J4731_21075;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004263101.1;locus_tag=J4731_21075;product=fimbrial protein;pseudo=true;transl_table=11
JAGETS010000071.1	Genbank	gene	29916	30143	.	-	.	ID=gene-J4731_21080;Name=J4731_21080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_21080
JAGETS010000071.1	GeneMarkS-2+	CDS	29916	30143	.	-	0	ID=cds-MBO1929727.1;Parent=gene-J4731_21080;Dbxref=NCBI_GP:MBO1929727.1;Name=MBO1929727.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_21080;product=hypothetical protein;protein_id=MBO1929727.1;transl_table=11
JAGETS010000071.1	Genbank	pseudogene	30333	31048	.	-	.	ID=gene-J4731_21085;Name=J4731_21085;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_21085;pseudo=true
JAGETS010000071.1	Protein Homology	CDS	30333	31048	.	-	0	ID=cds-J4731_21085;Parent=gene-J4731_21085;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014656760.1;locus_tag=J4731_21085;product=fimbria/pilus periplasmic chaperone;pseudo=true;transl_table=11
JAGETS010000071.1	Genbank	pseudogene	31083	33547	.	-	.	ID=gene-J4731_21090;Name=J4731_21090;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_21090;pseudo=true
JAGETS010000071.1	Protein Homology	CDS	31083	33547	.	-	0	ID=cds-J4731_21090;Parent=gene-J4731_21090;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008913636.1;locus_tag=J4731_21090;product=outer membrane usher protein;pseudo=true;transl_table=11
JAGETS010000071.1	Genbank	gene	33790	34023	.	-	.	ID=gene-J4731_21095;Name=J4731_21095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_21095
JAGETS010000071.1	GeneMarkS-2+	CDS	33790	34023	.	-	0	ID=cds-MBO1929728.1;Parent=gene-J4731_21095;Dbxref=NCBI_GP:MBO1929728.1;Name=MBO1929728.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_21095;product=hypothetical protein;protein_id=MBO1929728.1;transl_table=11
JAGETS010000071.1	Genbank	gene	34236	34760	.	-	.	ID=gene-J4731_21100;Name=J4731_21100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_21100
JAGETS010000071.1	Protein Homology	CDS	34236	34760	.	-	0	ID=cds-MBO1929729.1;Parent=gene-J4731_21100;Dbxref=NCBI_GP:MBO1929729.1;Name=MBO1929729.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004263117.1;locus_tag=J4731_21100;product=type 1 fimbrial protein;protein_id=MBO1929729.1;transl_table=11
JAGETS010000071.1	Genbank	gene	35012	35206	.	-	.	ID=gene-J4731_21105;Name=J4731_21105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_21105
JAGETS010000071.1	Protein Homology	CDS	35012	35206	.	-	0	ID=cds-MBO1929730.1;Parent=gene-J4731_21105;Dbxref=NCBI_GP:MBO1929730.1;Name=MBO1929730.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004925277.1;locus_tag=J4731_21105;product=helix-turn-helix transcriptional regulator;protein_id=MBO1929730.1;transl_table=11
JAGETS010000071.1	Genbank	pseudogene	36185	36744	.	-	.	ID=gene-J4731_21110;Name=J4731_21110;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_21110;pseudo=true
JAGETS010000071.1	Protein Homology	CDS	36185	36744	.	-	0	ID=cds-J4731_21110;Parent=gene-J4731_21110;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001389837.1;locus_tag=J4731_21110;product=tyrosine-type recombinase/integrase;pseudo=true;transl_table=11
JAGETS010000071.1	Genbank	pseudogene	37144	37440	.	+	.	ID=gene-J4731_21115;Name=J4731_21115;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_21115;pseudo=true
JAGETS010000071.1	Protein Homology	CDS	37144	37440	.	+	0	ID=cds-J4731_21115;Parent=gene-J4731_21115;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002440734.1;locus_tag=J4731_21115;product=YibL family ribosome-associated protein;pseudo=true;transl_table=11
JAGETS010000071.1	Genbank	gene	37899	38150	.	-	.	ID=gene-J4731_21120;Name=J4731_21120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_21120
JAGETS010000071.1	GeneMarkS-2+	CDS	37899	38150	.	-	0	ID=cds-MBO1929731.1;Parent=gene-J4731_21120;Dbxref=NCBI_GP:MBO1929731.1;Name=MBO1929731.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_21120;product=hypothetical protein;protein_id=MBO1929731.1;transl_table=11
##sequence-region JAGETS010000072.1 1 29707
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=587
JAGETS010000072.1	Genbank	region	1	29707	.	+	.	ID=JAGETS010000072.1:1..29707;Dbxref=taxon:587;collected-by=NHLS;collection-date=2018;country=South Africa: Pretoria;gbkey=Src;isolation-source=stool;lat-lon=25.7479 S 28.2293 E;mol_type=genomic DNA;nat-host=porcine;strain=SG003
JAGETS010000072.1	Genbank	pseudogene	142	1128	.	-	.	ID=gene-J4731_21125;Name=yut;gbkey=Gene;gene=yut;gene_biotype=pseudogene;locus_tag=J4731_21125;pseudo=true
JAGETS010000072.1	Protein Homology	CDS	142	1128	.	-	0	ID=cds-J4731_21125;Parent=gene-J4731_21125;Note=frameshifted;gbkey=CDS;gene=yut;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004256061.1;locus_tag=J4731_21125;product=urea transporter;pseudo=true;transl_table=11
JAGETS010000072.1	Genbank	pseudogene	1502	2242	.	-	.	ID=gene-J4731_21130;Name=J4731_21130;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_21130;pseudo=true
JAGETS010000072.1	Protein Homology	CDS	1502	2242	.	-	0	ID=cds-J4731_21130;Parent=gene-J4731_21130;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011906271.1;locus_tag=J4731_21130;product=urease accessory protein UreD;pseudo=true;transl_table=11
JAGETS010000072.1	Genbank	pseudogene	2245	2857	.	-	.	ID=gene-J4731_21135;Name=ureG;gbkey=Gene;gene=ureG;gene_biotype=pseudogene;locus_tag=J4731_21135;pseudo=true
JAGETS010000072.1	Protein Homology	CDS	2245	2857	.	-	0	ID=cds-J4731_21135;Parent=gene-J4731_21135;Note=frameshifted;gbkey=CDS;gene=ureG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011815717.1;locus_tag=J4731_21135;product=urease accessory protein UreG;pseudo=true;transl_table=11
JAGETS010000072.1	Genbank	pseudogene	2897	3578	.	-	.	ID=gene-J4731_21140;Name=J4731_21140;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_21140;pseudo=true
JAGETS010000072.1	Protein Homology	CDS	2897	3578	.	-	0	ID=cds-J4731_21140;Parent=gene-J4731_21140;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005188829.1;locus_tag=J4731_21140;product=urease accessory protein UreF;pseudo=true;transl_table=11
JAGETS010000072.1	Genbank	pseudogene	3608	4267	.	-	.	ID=gene-J4731_21145;Name=ureE;gbkey=Gene;gene=ureE;gene_biotype=pseudogene;locus_tag=J4731_21145;pseudo=true
JAGETS010000072.1	Protein Homology	CDS	3608	4267	.	-	0	ID=cds-J4731_21145;Parent=gene-J4731_21145;Note=involved in the assembly of the urease metallocenter%3B possible nickel donor%3B frameshifted;gbkey=CDS;gene=ureE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_032816444.1;locus_tag=J4731_21145;product=urease accessory protein UreE;pseudo=true;transl_table=11
JAGETS010000072.1	Genbank	pseudogene	4336	6044	.	-	.	ID=gene-J4731_21150;Name=J4731_21150;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_21150;pseudo=true
JAGETS010000072.1	Protein Homology	CDS	4336	6044	.	-	0	ID=cds-J4731_21150;Parent=gene-J4731_21150;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004256069.1;locus_tag=J4731_21150;product=urease subunit alpha;pseudo=true;transl_table=11
JAGETS010000072.1	Genbank	gene	6106	6528	.	-	.	ID=gene-J4731_21155;Name=J4731_21155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_21155
JAGETS010000072.1	Protein Homology	CDS	6106	6528	.	-	0	ID=cds-MBO1929732.1;Parent=gene-J4731_21155;Dbxref=NCBI_GP:MBO1929732.1;Name=MBO1929732.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF009677.0;locus_tag=J4731_21155;product=urease subunit beta;protein_id=MBO1929732.1;transl_table=11
JAGETS010000072.1	Genbank	pseudogene	6547	6814	.	-	.	ID=gene-J4731_21160;Name=J4731_21160;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_21160;pseudo=true
JAGETS010000072.1	Protein Homology	CDS	6547	6814	.	-	0	ID=cds-J4731_21160;Parent=gene-J4731_21160;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004703226.1;locus_tag=J4731_21160;product=urease subunit gamma;pseudo=true;transl_table=11
JAGETS010000072.1	Genbank	pseudogene	7052	7825	.	-	.	ID=gene-J4731_21165;Name=J4731_21165;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_21165;pseudo=true
JAGETS010000072.1	Protein Homology	CDS	7052	7825	.	-	0	ID=cds-J4731_21165;Parent=gene-J4731_21165;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004711591.1;locus_tag=J4731_21165;product=ATP-binding cassette domain-containing protein;pseudo=true;transl_table=11
JAGETS010000072.1	Genbank	pseudogene	7825	8624	.	-	.	ID=gene-J4731_21170;Name=J4731_21170;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_21170;pseudo=true
JAGETS010000072.1	Protein Homology	CDS	7825	8624	.	-	0	ID=cds-J4731_21170;Parent=gene-J4731_21170;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004256081.1;locus_tag=J4731_21170;product=ABC transporter permease;pseudo=true;transl_table=11
JAGETS010000072.1	Genbank	pseudogene	8614	9564	.	-	.	ID=gene-J4731_21175;Name=J4731_21175;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_21175;pseudo=true
JAGETS010000072.1	Protein Homology	CDS	8614	9564	.	-	0	ID=cds-J4731_21175;Parent=gene-J4731_21175;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004257896.1;locus_tag=J4731_21175;product=ABC transporter permease;pseudo=true;transl_table=11
JAGETS010000072.1	Genbank	pseudogene	9574	11088	.	-	.	ID=gene-J4731_21180;Name=J4731_21180;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_21180;pseudo=true
JAGETS010000072.1	Protein Homology	CDS	9574	11088	.	-	0	ID=cds-J4731_21180;Parent=gene-J4731_21180;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002264572.1;locus_tag=J4731_21180;product=ABC transporter substrate-binding protein;pseudo=true;transl_table=11
JAGETS010000072.1	Genbank	pseudogene	11231	12418	.	-	.	ID=gene-J4731_21185;Name=J4731_21185;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_21185;pseudo=true
JAGETS010000072.1	Protein Homology	CDS	11231	12418	.	-	0	ID=cds-J4731_21185;Parent=gene-J4731_21185;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004149711.1;locus_tag=J4731_21185;product=ammonium transporter;pseudo=true;transl_table=11
JAGETS010000072.1	Genbank	gene	13764	13849	.	-	.	ID=gene-J4731_21190;Name=J4731_21190;gbkey=Gene;gene_biotype=tRNA;locus_tag=J4731_21190
JAGETS010000072.1	tRNAscan-SE	tRNA	13764	13849	.	-	.	ID=rna-J4731_21190;Parent=gene-J4731_21190;anticodon=(pos:complement(13812..13814));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=J4731_21190;product=tRNA-Ser
JAGETS010000072.1	tRNAscan-SE	exon	13764	13849	.	-	.	ID=exon-J4731_21190-1;Parent=rna-J4731_21190;anticodon=(pos:complement(13812..13814));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=J4731_21190;product=tRNA-Ser
JAGETS010000072.1	Genbank	pseudogene	14030	14355	.	+	.	ID=gene-J4731_21195;Name=J4731_21195;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_21195;pseudo=true
JAGETS010000072.1	Protein Homology	CDS	14030	14355	.	+	0	ID=cds-J4731_21195;Parent=gene-J4731_21195;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005522810.1;locus_tag=J4731_21195;product=TusE/DsrC/DsvC family sulfur relay protein;pseudo=true;transl_table=11
JAGETS010000072.1	Genbank	pseudogene	14362	14638	.	-	.	ID=gene-J4731_21200;Name=J4731_21200;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_21200;pseudo=true
JAGETS010000072.1	Protein Homology	CDS	14362	14638	.	-	0	ID=cds-J4731_21200;Parent=gene-J4731_21200;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004256093.1;locus_tag=J4731_21200;product=acylphosphatase;pseudo=true;transl_table=11
JAGETS010000072.1	Genbank	gene	14857	15177	.	+	.	ID=gene-J4731_21205;Name=hspQ;gbkey=Gene;gene=hspQ;gene_biotype=protein_coding;locus_tag=J4731_21205
JAGETS010000072.1	Protein Homology	CDS	14857	15177	.	+	0	ID=cds-MBO1929733.1;Parent=gene-J4731_21205;Dbxref=NCBI_GP:MBO1929733.1;Name=MBO1929733.1;gbkey=CDS;gene=hspQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004244691.1;locus_tag=J4731_21205;product=heat shock protein HspQ;protein_id=MBO1929733.1;transl_table=11
JAGETS010000072.1	Genbank	gene	15274	15672	.	-	.	ID=gene-J4731_21210;Name=J4731_21210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_21210
JAGETS010000072.1	Protein Homology	CDS	15274	15672	.	-	0	ID=cds-MBO1929734.1;Parent=gene-J4731_21210;Dbxref=NCBI_GP:MBO1929734.1;Name=MBO1929734.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004918221.1;locus_tag=J4731_21210;product=CoA-binding protein;protein_id=MBO1929734.1;transl_table=11
JAGETS010000072.1	Genbank	pseudogene	15825	16237	.	+	.	ID=gene-J4731_21215;Name=J4731_21215;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_21215;pseudo=true
JAGETS010000072.1	Protein Homology	CDS	15825	16237	.	+	0	ID=cds-J4731_21215;Parent=gene-J4731_21215;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006118672.1;locus_tag=J4731_21215;product=methylglyoxal synthase;pseudo=true;transl_table=11
JAGETS010000072.1	Genbank	pseudogene	16294	18330	.	-	.	ID=gene-J4731_21220;Name=helD;gbkey=Gene;gene=helD;gene_biotype=pseudogene;locus_tag=J4731_21220;pseudo=true
JAGETS010000072.1	Protein Homology	CDS	16294	18330	.	-	0	ID=cds-J4731_21220;Parent=gene-J4731_21220;Note=frameshifted;gbkey=CDS;gene=helD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008911849.1;locus_tag=J4731_21220;product=DNA helicase IV;pseudo=true;transl_table=11
JAGETS010000072.1	Genbank	pseudogene	18452	20463	.	+	.	ID=gene-J4731_21225;Name=yccS;gbkey=Gene;gene=yccS;gene_biotype=pseudogene;locus_tag=J4731_21225;pseudo=true
JAGETS010000072.1	Protein Homology	CDS	18452	20463	.	+	0	ID=cds-J4731_21225;Parent=gene-J4731_21225;Note=frameshifted%3B internal stop;gbkey=CDS;gene=yccS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015671804.1;locus_tag=J4731_21225;product=TIGR01666 family membrane protein;pseudo=true;transl_table=11
JAGETS010000072.1	Genbank	pseudogene	20686	21329	.	-	.	ID=gene-J4731_21230;Name=J4731_21230;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_21230;pseudo=true
JAGETS010000072.1	Protein Homology	CDS	20686	21329	.	-	0	ID=cds-J4731_21230;Parent=gene-J4731_21230;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008911851.1;locus_tag=J4731_21230;product=TfoX/Sxy family DNA transformation protein;pseudo=true;transl_table=11
JAGETS010000072.1	Genbank	pseudogene	21520	22040	.	+	.	ID=gene-J4731_21235;Name=sulA;gbkey=Gene;gene=sulA;gene_biotype=pseudogene;locus_tag=J4731_21235;pseudo=true
JAGETS010000072.1	Protein Homology	CDS	21520	22040	.	+	0	ID=cds-J4731_21235;Parent=gene-J4731_21235;Note=frameshifted;gbkey=CDS;gene=sulA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014657947.1;locus_tag=J4731_21235;product=cell division inhibitor SulA;pseudo=true;transl_table=11
JAGETS010000072.1	Genbank	pseudogene	22406	23481	.	+	.	ID=gene-J4731_21240;Name=ompA;gbkey=Gene;gene=ompA;gene_biotype=pseudogene;locus_tag=J4731_21240;pseudo=true
JAGETS010000072.1	Protein Homology	CDS	22406	23481	.	+	0	ID=cds-J4731_21240;Parent=gene-J4731_21240;Note=frameshifted;gbkey=CDS;gene=ompA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013183944.1;locus_tag=J4731_21240;product=porin OmpA;pseudo=true;transl_table=11
JAGETS010000072.1	Genbank	pseudogene	23650	24110	.	-	.	ID=gene-J4731_21245;Name=matP;gbkey=Gene;gene=matP;gene_biotype=pseudogene;locus_tag=J4731_21245;pseudo=true
JAGETS010000072.1	Protein Homology	CDS	23650	24110	.	-	0	ID=cds-J4731_21245;Parent=gene-J4731_21245;Note=frameshifted;gbkey=CDS;gene=matP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004256123.1;locus_tag=J4731_21245;product=macrodomain Ter protein MatP;pseudo=true;transl_table=11
JAGETS010000072.1	Genbank	pseudogene	24783	26375	.	+	.	ID=gene-J4731_21250;Name=J4731_21250;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_21250;pseudo=true
JAGETS010000072.1	Protein Homology	CDS	24783	26375	.	+	0	ID=cds-J4731_21250;Parent=gene-J4731_21250;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006657846.1;locus_tag=J4731_21250;product=Lon protease family protein;pseudo=true;transl_table=11
JAGETS010000072.1	Genbank	pseudogene	26467	26983	.	+	.	ID=gene-J4731_21255;Name=fabA;gbkey=Gene;gene=fabA;gene_biotype=pseudogene;locus_tag=J4731_21255;pseudo=true
JAGETS010000072.1	Protein Homology	CDS	26467	26983	.	+	0	ID=cds-J4731_21255;Parent=gene-J4731_21255;Note=frameshifted;gbkey=CDS;gene=fabA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415474.1;locus_tag=J4731_21255;product=bifunctional 3-hydroxydecanoyl-ACP dehydratase/trans-2-decenoyl-ACP isomerase;pseudo=true;transl_table=11
JAGETS010000072.1	Genbank	pseudogene	28095	29236	.	-	.	ID=gene-J4731_21260;Name=J4731_21260;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_21260;pseudo=true
JAGETS010000072.1	Protein Homology	CDS	28095	29236	.	-	0	ID=cds-J4731_21260;Parent=gene-J4731_21260;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013650076.1;locus_tag=J4731_21260;product=paraquat-inducible protein B;pseudo=true;transl_table=11
##sequence-region JAGETS010000073.1 1 5298
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=587
JAGETS010000073.1	Genbank	region	1	5298	.	+	.	ID=JAGETS010000073.1:1..5298;Dbxref=taxon:587;collected-by=NHLS;collection-date=2018;country=South Africa: Pretoria;gbkey=Src;isolation-source=stool;lat-lon=25.7479 S 28.2293 E;mol_type=genomic DNA;nat-host=porcine;strain=SG003
JAGETS010000073.1	Genbank	gene	117	308	.	-	.	ID=gene-J4731_21265;Name=J4731_21265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_21265
JAGETS010000073.1	GeneMarkS-2+	CDS	117	308	.	-	0	ID=cds-MBO1929735.1;Parent=gene-J4731_21265;Dbxref=NCBI_GP:MBO1929735.1;Name=MBO1929735.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_21265;product=hypothetical protein;protein_id=MBO1929735.1;transl_table=11
JAGETS010000073.1	Genbank	gene	343	510	.	-	.	ID=gene-J4731_21270;Name=J4731_21270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_21270
JAGETS010000073.1	GeneMarkS-2+	CDS	343	510	.	-	0	ID=cds-MBO1929736.1;Parent=gene-J4731_21270;Dbxref=NCBI_GP:MBO1929736.1;Name=MBO1929736.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_21270;product=hypothetical protein;protein_id=MBO1929736.1;transl_table=11
JAGETS010000073.1	Genbank	pseudogene	1144	1785	.	-	.	ID=gene-J4731_21275;Name=J4731_21275;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_21275;pseudo=true
JAGETS010000073.1	Protein Homology	CDS	1144	1785	.	-	0	ID=cds-J4731_21275;Parent=gene-J4731_21275;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_032495680.1;locus_tag=J4731_21275;product=QnrD family quinolone resistance pentapeptide repeat protein;pseudo=true;transl_table=11
JAGETS010000073.1	Genbank	gene	1982	2221	.	-	.	ID=gene-J4731_21280;Name=J4731_21280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_21280
JAGETS010000073.1	GeneMarkS-2+	CDS	1982	2221	.	-	0	ID=cds-MBO1929737.1;Parent=gene-J4731_21280;Dbxref=NCBI_GP:MBO1929737.1;Name=MBO1929737.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_21280;product=hypothetical protein;protein_id=MBO1929737.1;transl_table=11
JAGETS010000073.1	Genbank	gene	2327	2467	.	-	.	ID=gene-J4731_21285;Name=J4731_21285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_21285
JAGETS010000073.1	GeneMarkS-2+	CDS	2327	2467	.	-	0	ID=cds-MBO1929738.1;Parent=gene-J4731_21285;Dbxref=NCBI_GP:MBO1929738.1;Name=MBO1929738.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_21285;product=hypothetical protein;protein_id=MBO1929738.1;transl_table=11
JAGETS010000073.1	Genbank	gene	2732	2968	.	-	.	ID=gene-J4731_21290;Name=J4731_21290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_21290
JAGETS010000073.1	GeneMarkS-2+	CDS	2732	2968	.	-	0	ID=cds-MBO1929739.1;Parent=gene-J4731_21290;Dbxref=NCBI_GP:MBO1929739.1;Name=MBO1929739.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_21290;product=hypothetical protein;protein_id=MBO1929739.1;transl_table=11
JAGETS010000073.1	Genbank	pseudogene	3805	4403	.	-	.	ID=gene-J4731_21295;Name=J4731_21295;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_21295;pseudo=true
JAGETS010000073.1	Protein Homology	CDS	3805	4403	.	-	0	ID=cds-J4731_21295;Parent=gene-J4731_21295;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004943345.1;locus_tag=J4731_21295;product=QnrD family quinolone resistance pentapeptide repeat protein;pseudo=true;transl_table=11
JAGETS010000073.1	Genbank	gene	4638	5111	.	-	.	ID=gene-J4731_21300;Name=J4731_21300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_21300
JAGETS010000073.1	GeneMarkS-2+	CDS	4638	5111	.	-	0	ID=cds-MBO1929740.1;Parent=gene-J4731_21300;Dbxref=NCBI_GP:MBO1929740.1;Name=MBO1929740.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_21300;product=hypothetical protein;protein_id=MBO1929740.1;transl_table=11
##sequence-region JAGETS010000074.1 1 5264
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=587
JAGETS010000074.1	Genbank	region	1	5264	.	+	.	ID=JAGETS010000074.1:1..5264;Dbxref=taxon:587;collected-by=NHLS;collection-date=2018;country=South Africa: Pretoria;gbkey=Src;isolation-source=stool;lat-lon=25.7479 S 28.2293 E;mol_type=genomic DNA;nat-host=porcine;strain=SG003
JAGETS010000074.1	Genbank	pseudogene	669	1310	.	-	.	ID=gene-J4731_21305;Name=J4731_21305;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_21305;pseudo=true
JAGETS010000074.1	Protein Homology	CDS	669	1310	.	-	0	ID=cds-J4731_21305;Parent=gene-J4731_21305;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_032495680.1;locus_tag=J4731_21305;product=QnrD family quinolone resistance pentapeptide repeat protein;pseudo=true;transl_table=11
JAGETS010000074.1	Genbank	gene	1506	1727	.	-	.	ID=gene-J4731_21310;Name=J4731_21310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_21310
JAGETS010000074.1	GeneMarkS-2+	CDS	1506	1727	.	-	0	ID=cds-MBO1929741.1;Parent=gene-J4731_21310;Dbxref=NCBI_GP:MBO1929741.1;Name=MBO1929741.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_21310;product=hypothetical protein;protein_id=MBO1929741.1;transl_table=11
JAGETS010000074.1	Genbank	gene	1785	1982	.	-	.	ID=gene-J4731_21315;Name=J4731_21315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_21315
JAGETS010000074.1	GeneMarkS-2+	CDS	1785	1982	.	-	0	ID=cds-MBO1929742.1;Parent=gene-J4731_21315;Dbxref=NCBI_GP:MBO1929742.1;Name=MBO1929742.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_21315;product=hypothetical protein;protein_id=MBO1929742.1;transl_table=11
JAGETS010000074.1	Genbank	gene	2251	2487	.	-	.	ID=gene-J4731_21320;Name=J4731_21320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_21320
JAGETS010000074.1	GeneMarkS-2+	CDS	2251	2487	.	-	0	ID=cds-MBO1929743.1;Parent=gene-J4731_21320;Dbxref=NCBI_GP:MBO1929743.1;Name=MBO1929743.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_21320;product=hypothetical protein;protein_id=MBO1929743.1;transl_table=11
JAGETS010000074.1	Genbank	gene	2484	2705	.	-	.	ID=gene-J4731_21325;Name=J4731_21325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_21325
JAGETS010000074.1	GeneMarkS-2+	CDS	2484	2705	.	-	0	ID=cds-MBO1929744.1;Parent=gene-J4731_21325;Dbxref=NCBI_GP:MBO1929744.1;Name=MBO1929744.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_21325;product=hypothetical protein;protein_id=MBO1929744.1;transl_table=11
JAGETS010000074.1	Genbank	gene	3031	3285	.	+	.	ID=gene-J4731_21330;Name=J4731_21330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_21330
JAGETS010000074.1	GeneMarkS-2+	CDS	3031	3285	.	+	0	ID=cds-MBO1929745.1;Parent=gene-J4731_21330;Dbxref=NCBI_GP:MBO1929745.1;Name=MBO1929745.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_21330;product=hypothetical protein;protein_id=MBO1929745.1;transl_table=11
JAGETS010000074.1	Genbank	pseudogene	3321	3956	.	-	.	ID=gene-J4731_21335;Name=J4731_21335;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_21335;pseudo=true
JAGETS010000074.1	Protein Homology	CDS	3321	3956	.	-	0	ID=cds-J4731_21335;Parent=gene-J4731_21335;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_032495680.1;locus_tag=J4731_21335;product=QnrD family quinolone resistance pentapeptide repeat protein;pseudo=true;transl_table=11
JAGETS010000074.1	Genbank	gene	4130	4456	.	-	.	ID=gene-J4731_21340;Name=J4731_21340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_21340
JAGETS010000074.1	GeneMarkS-2+	CDS	4130	4456	.	-	0	ID=cds-MBO1929746.1;Parent=gene-J4731_21340;Dbxref=NCBI_GP:MBO1929746.1;Name=MBO1929746.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_21340;product=hypothetical protein;protein_id=MBO1929746.1;transl_table=11
JAGETS010000074.1	Genbank	gene	4494	4631	.	-	.	ID=gene-J4731_21345;Name=J4731_21345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_21345
JAGETS010000074.1	GeneMarkS-2+	CDS	4494	4631	.	-	0	ID=cds-MBO1929747.1;Parent=gene-J4731_21345;Dbxref=NCBI_GP:MBO1929747.1;Name=MBO1929747.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_21345;product=hypothetical protein;protein_id=MBO1929747.1;transl_table=11
JAGETS010000074.1	Genbank	gene	4931	5122	.	-	.	ID=gene-J4731_21350;Name=J4731_21350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_21350
JAGETS010000074.1	GeneMarkS-2+	CDS	4931	5122	.	-	0	ID=cds-MBO1929748.1;Parent=gene-J4731_21350;Dbxref=NCBI_GP:MBO1929748.1;Name=MBO1929748.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_21350;product=hypothetical protein;protein_id=MBO1929748.1;transl_table=11
##sequence-region JAGETS010000075.1 1 5228
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=587
JAGETS010000075.1	Genbank	region	1	5228	.	+	.	ID=JAGETS010000075.1:1..5228;Dbxref=taxon:587;collected-by=NHLS;collection-date=2018;country=South Africa: Pretoria;gbkey=Src;isolation-source=stool;lat-lon=25.7479 S 28.2293 E;mol_type=genomic DNA;nat-host=porcine;strain=SG003
JAGETS010000075.1	Genbank	gene	381	581	.	-	.	ID=gene-J4731_21355;Name=J4731_21355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_21355
JAGETS010000075.1	GeneMarkS-2+	CDS	381	581	.	-	0	ID=cds-MBO1929749.1;Parent=gene-J4731_21355;Dbxref=NCBI_GP:MBO1929749.1;Name=MBO1929749.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_21355;product=hypothetical protein;protein_id=MBO1929749.1;transl_table=11
JAGETS010000075.1	Genbank	gene	613	819	.	-	.	ID=gene-J4731_21360;Name=J4731_21360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_21360
JAGETS010000075.1	GeneMarkS-2+	CDS	613	819	.	-	0	ID=cds-MBO1929750.1;Parent=gene-J4731_21360;Dbxref=NCBI_GP:MBO1929750.1;Name=MBO1929750.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_21360;product=hypothetical protein;protein_id=MBO1929750.1;transl_table=11
JAGETS010000075.1	Genbank	pseudogene	1451	2039	.	-	.	ID=gene-J4731_21365;Name=J4731_21365;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_21365;pseudo=true
JAGETS010000075.1	Protein Homology	CDS	1451	2039	.	-	0	ID=cds-J4731_21365;Parent=gene-J4731_21365;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004943345.1;locus_tag=J4731_21365;product=QnrD family quinolone resistance pentapeptide repeat protein;pseudo=true;transl_table=11
JAGETS010000075.1	Genbank	gene	2432	2716	.	-	.	ID=gene-J4731_21370;Name=J4731_21370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_21370
JAGETS010000075.1	GeneMarkS-2+	CDS	2432	2716	.	-	0	ID=cds-MBO1929751.1;Parent=gene-J4731_21370;Dbxref=NCBI_GP:MBO1929751.1;Name=MBO1929751.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_21370;product=hypothetical protein;protein_id=MBO1929751.1;transl_table=11
JAGETS010000075.1	Genbank	gene	3022	3222	.	-	.	ID=gene-J4731_21375;Name=J4731_21375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_21375
JAGETS010000075.1	GeneMarkS-2+	CDS	3022	3222	.	-	0	ID=cds-MBO1929752.1;Parent=gene-J4731_21375;Dbxref=NCBI_GP:MBO1929752.1;Name=MBO1929752.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_21375;product=hypothetical protein;protein_id=MBO1929752.1;transl_table=11
JAGETS010000075.1	Genbank	gene	3254	3460	.	-	.	ID=gene-J4731_21380;Name=J4731_21380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_21380
JAGETS010000075.1	GeneMarkS-2+	CDS	3254	3460	.	-	0	ID=cds-MBO1929753.1;Parent=gene-J4731_21380;Dbxref=NCBI_GP:MBO1929753.1;Name=MBO1929753.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_21380;product=hypothetical protein;protein_id=MBO1929753.1;transl_table=11
JAGETS010000075.1	Genbank	pseudogene	4073	4710	.	-	.	ID=gene-J4731_21385;Name=J4731_21385;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_21385;pseudo=true
JAGETS010000075.1	Protein Homology	CDS	4073	4710	.	-	0	ID=cds-J4731_21385;Parent=gene-J4731_21385;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_032495680.1;locus_tag=J4731_21385;product=QnrD family quinolone resistance pentapeptide repeat protein;pseudo=true;transl_table=11
JAGETS010000075.1	Genbank	gene	4903	5228	.	-	.	ID=gene-J4731_21390;Name=J4731_21390;end_range=5228,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_21390;partial=true
JAGETS010000075.1	GeneMarkS-2+	CDS	4903	5228	.	-	2	ID=cds-MBO1929754.1;Parent=gene-J4731_21390;Dbxref=NCBI_GP:MBO1929754.1;Name=MBO1929754.1;end_range=5228,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_21390;partial=true;product=hypothetical protein;protein_id=MBO1929754.1;transl_table=11
##sequence-region JAGETS010000076.1 1 4225
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=587
JAGETS010000076.1	Genbank	region	1	4225	.	+	.	ID=JAGETS010000076.1:1..4225;Dbxref=taxon:587;collected-by=NHLS;collection-date=2018;country=South Africa: Pretoria;gbkey=Src;isolation-source=stool;lat-lon=25.7479 S 28.2293 E;mol_type=genomic DNA;nat-host=porcine;strain=SG003
JAGETS010000076.1	Genbank	gene	368	544	.	-	.	ID=gene-J4731_21395;Name=J4731_21395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_21395
JAGETS010000076.1	GeneMarkS-2+	CDS	368	544	.	-	0	ID=cds-MBO1929755.1;Parent=gene-J4731_21395;Dbxref=NCBI_GP:MBO1929755.1;Name=MBO1929755.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_21395;product=hypothetical protein;protein_id=MBO1929755.1;transl_table=11
JAGETS010000076.1	Genbank	gene	601	840	.	-	.	ID=gene-J4731_21400;Name=J4731_21400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_21400
JAGETS010000076.1	GeneMarkS-2+	CDS	601	840	.	-	0	ID=cds-MBO1929756.1;Parent=gene-J4731_21400;Dbxref=NCBI_GP:MBO1929756.1;Name=MBO1929756.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_21400;product=hypothetical protein;protein_id=MBO1929756.1;transl_table=11
JAGETS010000076.1	Genbank	gene	903	1343	.	+	.	ID=gene-J4731_21405;Name=J4731_21405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_21405
JAGETS010000076.1	GeneMarkS-2+	CDS	903	1343	.	+	0	ID=cds-MBO1929757.1;Parent=gene-J4731_21405;Dbxref=NCBI_GP:MBO1929757.1;Name=MBO1929757.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_21405;product=hypothetical protein;protein_id=MBO1929757.1;transl_table=11
JAGETS010000076.1	Genbank	pseudogene	1378	1978	.	-	.	ID=gene-J4731_21410;Name=J4731_21410;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_21410;pseudo=true
JAGETS010000076.1	Protein Homology	CDS	1378	1978	.	-	0	ID=cds-J4731_21410;Parent=gene-J4731_21410;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017900990.1;locus_tag=J4731_21410;product=QnrD family quinolone resistance pentapeptide repeat protein;pseudo=true;transl_table=11
JAGETS010000076.1	Genbank	gene	2370	2690	.	-	.	ID=gene-J4731_21415;Name=J4731_21415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_21415
JAGETS010000076.1	GeneMarkS-2+	CDS	2370	2690	.	-	0	ID=cds-MBO1929758.1;Parent=gene-J4731_21415;Dbxref=NCBI_GP:MBO1929758.1;Name=MBO1929758.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_21415;product=hypothetical protein;protein_id=MBO1929758.1;transl_table=11
JAGETS010000076.1	Genbank	gene	2960	3388	.	-	.	ID=gene-J4731_21420;Name=J4731_21420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_21420
JAGETS010000076.1	GeneMarkS-2+	CDS	2960	3388	.	-	0	ID=cds-MBO1929759.1;Parent=gene-J4731_21420;Dbxref=NCBI_GP:MBO1929759.1;Name=MBO1929759.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_21420;product=hypothetical protein;protein_id=MBO1929759.1;transl_table=11
JAGETS010000076.1	Genbank	pseudogene	4009	4225	.	-	.	ID=gene-J4731_21425;Name=J4731_21425;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_21425;pseudo=true
JAGETS010000076.1	Protein Homology	CDS	4009	4225	.	-	0	ID=cds-J4731_21425;Parent=gene-J4731_21425;Note=frameshifted%3B incomplete%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_032495680.1;locus_tag=J4731_21425;product=QnrD family quinolone resistance pentapeptide repeat protein;pseudo=true;transl_table=11
##sequence-region JAGETS010000077.1 1 5006
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=587
JAGETS010000077.1	Genbank	region	1	5006	.	+	.	ID=JAGETS010000077.1:1..5006;Dbxref=taxon:587;collected-by=NHLS;collection-date=2018;country=South Africa: Pretoria;gbkey=Src;isolation-source=stool;lat-lon=25.7479 S 28.2293 E;mol_type=genomic DNA;nat-host=porcine;strain=SG003
JAGETS010000077.1	Genbank	gene	25	261	.	-	.	ID=gene-J4731_21430;Name=J4731_21430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_21430
JAGETS010000077.1	GeneMarkS-2+	CDS	25	261	.	-	0	ID=cds-MBO1929760.1;Parent=gene-J4731_21430;Dbxref=NCBI_GP:MBO1929760.1;Name=MBO1929760.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_21430;product=hypothetical protein;protein_id=MBO1929760.1;transl_table=11
JAGETS010000077.1	Genbank	gene	296	460	.	-	.	ID=gene-J4731_21435;Name=J4731_21435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_21435
JAGETS010000077.1	GeneMarkS-2+	CDS	296	460	.	-	0	ID=cds-MBO1929761.1;Parent=gene-J4731_21435;Dbxref=NCBI_GP:MBO1929761.1;Name=MBO1929761.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_21435;product=hypothetical protein;protein_id=MBO1929761.1;transl_table=11
JAGETS010000077.1	Genbank	gene	803	1057	.	+	.	ID=gene-J4731_21440;Name=J4731_21440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_21440
JAGETS010000077.1	GeneMarkS-2+	CDS	803	1057	.	+	0	ID=cds-MBO1929762.1;Parent=gene-J4731_21440;Dbxref=NCBI_GP:MBO1929762.1;Name=MBO1929762.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_21440;product=hypothetical protein;protein_id=MBO1929762.1;transl_table=11
JAGETS010000077.1	Genbank	pseudogene	1092	1731	.	-	.	ID=gene-J4731_21445;Name=J4731_21445;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_21445;pseudo=true
JAGETS010000077.1	Protein Homology	CDS	1092	1731	.	-	0	ID=cds-J4731_21445;Parent=gene-J4731_21445;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_032495680.1;locus_tag=J4731_21445;product=QnrD family quinolone resistance pentapeptide repeat protein;pseudo=true;transl_table=11
JAGETS010000077.1	Genbank	gene	1928	2206	.	-	.	ID=gene-J4731_21450;Name=J4731_21450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_21450
JAGETS010000077.1	GeneMarkS-2+	CDS	1928	2206	.	-	0	ID=cds-MBO1929763.1;Parent=gene-J4731_21450;Dbxref=NCBI_GP:MBO1929763.1;Name=MBO1929763.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_21450;product=hypothetical protein;protein_id=MBO1929763.1;transl_table=11
JAGETS010000077.1	Genbank	gene	2203	2403	.	-	.	ID=gene-J4731_21455;Name=J4731_21455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_21455
JAGETS010000077.1	GeneMarkS-2+	CDS	2203	2403	.	-	0	ID=cds-MBO1929764.1;Parent=gene-J4731_21455;Dbxref=NCBI_GP:MBO1929764.1;Name=MBO1929764.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_21455;product=hypothetical protein;protein_id=MBO1929764.1;transl_table=11
JAGETS010000077.1	Genbank	gene	2672	2908	.	-	.	ID=gene-J4731_21460;Name=J4731_21460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_21460
JAGETS010000077.1	GeneMarkS-2+	CDS	2672	2908	.	-	0	ID=cds-MBO1929765.1;Parent=gene-J4731_21460;Dbxref=NCBI_GP:MBO1929765.1;Name=MBO1929765.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_21460;product=hypothetical protein;protein_id=MBO1929765.1;transl_table=11
JAGETS010000077.1	Genbank	pseudogene	3722	4348	.	-	.	ID=gene-J4731_21465;Name=J4731_21465;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_21465;pseudo=true
JAGETS010000077.1	Protein Homology	CDS	3722	4348	.	-	0	ID=cds-J4731_21465;Parent=gene-J4731_21465;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_032495680.1;locus_tag=J4731_21465;product=QnrD family quinolone resistance pentapeptide repeat protein;pseudo=true;transl_table=11
JAGETS010000077.1	Genbank	gene	4522	5006	.	-	.	ID=gene-J4731_21470;Name=J4731_21470;end_range=5006,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_21470;partial=true
JAGETS010000077.1	GeneMarkS-2+	CDS	4522	5006	.	-	2	ID=cds-MBO1929766.1;Parent=gene-J4731_21470;Dbxref=NCBI_GP:MBO1929766.1;Name=MBO1929766.1;end_range=5006,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_21470;partial=true;product=hypothetical protein;protein_id=MBO1929766.1;transl_table=11
##sequence-region JAGETS010000078.1 1 5150
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=587
JAGETS010000078.1	Genbank	region	1	5150	.	+	.	ID=JAGETS010000078.1:1..5150;Dbxref=taxon:587;collected-by=NHLS;collection-date=2018;country=South Africa: Pretoria;gbkey=Src;isolation-source=stool;lat-lon=25.7479 S 28.2293 E;mol_type=genomic DNA;nat-host=porcine;strain=SG003
JAGETS010000078.1	Genbank	gene	179	355	.	-	.	ID=gene-J4731_21475;Name=J4731_21475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_21475
JAGETS010000078.1	GeneMarkS-2+	CDS	179	355	.	-	0	ID=cds-MBO1929767.1;Parent=gene-J4731_21475;Dbxref=NCBI_GP:MBO1929767.1;Name=MBO1929767.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_21475;product=hypothetical protein;protein_id=MBO1929767.1;transl_table=11
JAGETS010000078.1	Genbank	gene	399	566	.	-	.	ID=gene-J4731_21480;Name=J4731_21480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_21480
JAGETS010000078.1	GeneMarkS-2+	CDS	399	566	.	-	0	ID=cds-MBO1929768.1;Parent=gene-J4731_21480;Dbxref=NCBI_GP:MBO1929768.1;Name=MBO1929768.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_21480;product=hypothetical protein;protein_id=MBO1929768.1;transl_table=11
JAGETS010000078.1	Genbank	gene	908	1153	.	+	.	ID=gene-J4731_21485;Name=J4731_21485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_21485
JAGETS010000078.1	GeneMarkS-2+	CDS	908	1153	.	+	0	ID=cds-MBO1929769.1;Parent=gene-J4731_21485;Dbxref=NCBI_GP:MBO1929769.1;Name=MBO1929769.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_21485;product=hypothetical protein;protein_id=MBO1929769.1;transl_table=11
JAGETS010000078.1	Genbank	pseudogene	1190	1831	.	-	.	ID=gene-J4731_21490;Name=J4731_21490;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_21490;pseudo=true
JAGETS010000078.1	Protein Homology	CDS	1190	1831	.	-	0	ID=cds-J4731_21490;Parent=gene-J4731_21490;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_032495680.1;locus_tag=J4731_21490;product=QnrD family quinolone resistance pentapeptide repeat protein;pseudo=true;transl_table=11
JAGETS010000078.1	Genbank	gene	2028	2258	.	-	.	ID=gene-J4731_21495;Name=J4731_21495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_21495
JAGETS010000078.1	GeneMarkS-2+	CDS	2028	2258	.	-	0	ID=cds-MBO1929770.1;Parent=gene-J4731_21495;Dbxref=NCBI_GP:MBO1929770.1;Name=MBO1929770.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_21495;product=hypothetical protein;protein_id=MBO1929770.1;transl_table=11
JAGETS010000078.1	Genbank	gene	2301	2501	.	-	.	ID=gene-J4731_21500;Name=J4731_21500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_21500
JAGETS010000078.1	GeneMarkS-2+	CDS	2301	2501	.	-	0	ID=cds-MBO1929771.1;Parent=gene-J4731_21500;Dbxref=NCBI_GP:MBO1929771.1;Name=MBO1929771.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_21500;product=hypothetical protein;protein_id=MBO1929771.1;transl_table=11
JAGETS010000078.1	Genbank	gene	2687	2986	.	-	.	ID=gene-J4731_21505;Name=J4731_21505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_21505
JAGETS010000078.1	GeneMarkS-2+	CDS	2687	2986	.	-	0	ID=cds-MBO1929772.1;Parent=gene-J4731_21505;Dbxref=NCBI_GP:MBO1929772.1;Name=MBO1929772.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_21505;product=hypothetical protein;protein_id=MBO1929772.1;transl_table=11
JAGETS010000078.1	Genbank	pseudogene	3813	4454	.	-	.	ID=gene-J4731_21510;Name=J4731_21510;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_21510;pseudo=true
JAGETS010000078.1	Protein Homology	CDS	3813	4454	.	-	0	ID=cds-J4731_21510;Parent=gene-J4731_21510;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_032495680.1;locus_tag=J4731_21510;product=QnrD family quinolone resistance pentapeptide repeat protein;pseudo=true;transl_table=11
JAGETS010000078.1	Genbank	gene	4664	4942	.	-	.	ID=gene-J4731_21515;Name=J4731_21515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_21515
JAGETS010000078.1	GeneMarkS-2+	CDS	4664	4942	.	-	0	ID=cds-MBO1929773.1;Parent=gene-J4731_21515;Dbxref=NCBI_GP:MBO1929773.1;Name=MBO1929773.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_21515;product=hypothetical protein;protein_id=MBO1929773.1;transl_table=11
##sequence-region JAGETS010000079.1 1 25895
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=587
JAGETS010000079.1	Genbank	region	1	25895	.	+	.	ID=JAGETS010000079.1:1..25895;Dbxref=taxon:587;collected-by=NHLS;collection-date=2018;country=South Africa: Pretoria;gbkey=Src;isolation-source=stool;lat-lon=25.7479 S 28.2293 E;mol_type=genomic DNA;nat-host=porcine;strain=SG003
JAGETS010000079.1	Genbank	gene	1468	1683	.	+	.	ID=gene-J4731_21520;Name=J4731_21520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_21520
JAGETS010000079.1	GeneMarkS-2+	CDS	1468	1683	.	+	0	ID=cds-MBO1929774.1;Parent=gene-J4731_21520;Dbxref=NCBI_GP:MBO1929774.1;Name=MBO1929774.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_21520;product=hypothetical protein;protein_id=MBO1929774.1;transl_table=11
JAGETS010000079.1	Genbank	gene	2182	2382	.	+	.	ID=gene-J4731_21525;Name=J4731_21525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_21525
JAGETS010000079.1	GeneMarkS-2+	CDS	2182	2382	.	+	0	ID=cds-MBO1929775.1;Parent=gene-J4731_21525;Dbxref=NCBI_GP:MBO1929775.1;Name=MBO1929775.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_21525;product=hypothetical protein;protein_id=MBO1929775.1;transl_table=11
JAGETS010000079.1	Genbank	gene	2399	2644	.	+	.	ID=gene-J4731_21530;Name=J4731_21530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_21530
JAGETS010000079.1	GeneMarkS-2+	CDS	2399	2644	.	+	0	ID=cds-MBO1929776.1;Parent=gene-J4731_21530;Dbxref=NCBI_GP:MBO1929776.1;Name=MBO1929776.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_21530;product=hypothetical protein;protein_id=MBO1929776.1;transl_table=11
JAGETS010000079.1	Genbank	gene	2826	3065	.	+	.	ID=gene-J4731_21535;Name=J4731_21535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_21535
JAGETS010000079.1	Protein Homology	CDS	2826	3065	.	+	0	ID=cds-MBO1929777.1;Parent=gene-J4731_21535;Dbxref=NCBI_GP:MBO1929777.1;Name=MBO1929777.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016703.1;locus_tag=J4731_21535;product=DUF637 domain-containing protein;protein_id=MBO1929777.1;transl_table=11
JAGETS010000079.1	Genbank	gene	3076	3237	.	+	.	ID=gene-J4731_21540;Name=J4731_21540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_21540
JAGETS010000079.1	Protein Homology	CDS	3076	3237	.	+	0	ID=cds-MBO1929778.1;Parent=gene-J4731_21540;Dbxref=NCBI_GP:MBO1929778.1;Name=MBO1929778.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016703.1;locus_tag=J4731_21540;product=DUF637 domain-containing protein;protein_id=MBO1929778.1;transl_table=11
JAGETS010000079.1	Genbank	gene	3429	3572	.	+	.	ID=gene-J4731_21545;Name=J4731_21545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_21545
JAGETS010000079.1	Protein Homology	CDS	3429	3572	.	+	0	ID=cds-MBO1929779.1;Parent=gene-J4731_21545;Dbxref=NCBI_GP:MBO1929779.1;Name=MBO1929779.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016702.1;locus_tag=J4731_21545;product=VENN motif pre-toxin domain-containing protein;protein_id=MBO1929779.1;transl_table=11
JAGETS010000079.1	Genbank	gene	3775	3987	.	+	.	ID=gene-J4731_21550;Name=J4731_21550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_21550
JAGETS010000079.1	GeneMarkS-2+	CDS	3775	3987	.	+	0	ID=cds-MBO1929780.1;Parent=gene-J4731_21550;Dbxref=NCBI_GP:MBO1929780.1;Name=MBO1929780.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_21550;product=hypothetical protein;protein_id=MBO1929780.1;transl_table=11
JAGETS010000079.1	Genbank	gene	4060	4473	.	+	.	ID=gene-J4731_21555;Name=J4731_21555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_21555
JAGETS010000079.1	GeneMarkS-2+	CDS	4060	4473	.	+	0	ID=cds-MBO1929781.1;Parent=gene-J4731_21555;Dbxref=NCBI_GP:MBO1929781.1;Name=MBO1929781.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_21555;product=hypothetical protein;protein_id=MBO1929781.1;transl_table=11
JAGETS010000079.1	Genbank	gene	4474	4770	.	+	.	ID=gene-J4731_21560;Name=J4731_21560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_21560
JAGETS010000079.1	Protein Homology	CDS	4474	4770	.	+	0	ID=cds-MBO1929782.1;Parent=gene-J4731_21560;Dbxref=NCBI_GP:MBO1929782.1;Name=MBO1929782.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018915.1;locus_tag=J4731_21560;product=CdiI family contact-dependent growth inhibition immunity protein;protein_id=MBO1929782.1;transl_table=11
JAGETS010000079.1	Genbank	gene	4859	5122	.	+	.	ID=gene-J4731_21565;Name=J4731_21565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_21565
JAGETS010000079.1	GeneMarkS-2+	CDS	4859	5122	.	+	0	ID=cds-MBO1929783.1;Parent=gene-J4731_21565;Dbxref=NCBI_GP:MBO1929783.1;Name=MBO1929783.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_21565;product=hypothetical protein;protein_id=MBO1929783.1;transl_table=11
JAGETS010000079.1	Genbank	pseudogene	6182	6798	.	-	.	ID=gene-J4731_21570;Name=J4731_21570;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_21570;pseudo=true
JAGETS010000079.1	Protein Homology	CDS	6182	6798	.	-	0	ID=cds-J4731_21570;Parent=gene-J4731_21570;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004918711.1;locus_tag=J4731_21570;product=bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase;pseudo=true;transl_table=11
JAGETS010000079.1	Genbank	pseudogene	6811	7760	.	-	.	ID=gene-J4731_21575;Name=J4731_21575;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_21575;pseudo=true
JAGETS010000079.1	Protein Homology	CDS	6811	7760	.	-	0	ID=cds-J4731_21575;Parent=gene-J4731_21575;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003851975.1;locus_tag=J4731_21575;product=sugar kinase;pseudo=true;transl_table=11
JAGETS010000079.1	Genbank	pseudogene	7967	8742	.	+	.	ID=gene-J4731_21580;Name=kdgR;gbkey=Gene;gene=kdgR;gene_biotype=pseudogene;locus_tag=J4731_21580;pseudo=true
JAGETS010000079.1	Protein Homology	CDS	7967	8742	.	+	0	ID=cds-J4731_21580;Parent=gene-J4731_21580;Note=frameshifted%3B internal stop;gbkey=CDS;gene=kdgR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004255519.1;locus_tag=J4731_21580;product=DNA-binding transcriptional regulator KdgR;pseudo=true;transl_table=11
JAGETS010000079.1	Genbank	pseudogene	9311	11332	.	-	.	ID=gene-J4731_21585;Name=J4731_21585;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_21585;pseudo=true
JAGETS010000079.1	Protein Homology	CDS	9311	11332	.	-	0	ID=cds-J4731_21585;Parent=gene-J4731_21585;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000131044.1;locus_tag=J4731_21585;product=choline transporter;pseudo=true;transl_table=11
JAGETS010000079.1	Genbank	gene	11541	12140	.	+	.	ID=gene-J4731_21590;Name=betI;gbkey=Gene;gene=betI;gene_biotype=protein_coding;locus_tag=J4731_21590
JAGETS010000079.1	Protein Homology	CDS	11541	12140	.	+	0	ID=cds-MBO1929784.1;Parent=gene-J4731_21590;Dbxref=NCBI_GP:MBO1929784.1;Name=MBO1929784.1;gbkey=CDS;gene=betI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004255507.1;locus_tag=J4731_21590;product=transcriptional regulator BetI;protein_id=MBO1929784.1;transl_table=11
JAGETS010000079.1	Genbank	pseudogene	12163	13642	.	+	.	ID=gene-J4731_21595;Name=betB;gbkey=Gene;gene=betB;gene_biotype=pseudogene;locus_tag=J4731_21595;pseudo=true
JAGETS010000079.1	Protein Homology	CDS	12163	13642	.	+	0	ID=cds-J4731_21595;Parent=gene-J4731_21595;Note=frameshifted%3B internal stop;gbkey=CDS;gene=betB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010845385.1;locus_tag=J4731_21595;product=betaine-aldehyde dehydrogenase;pseudo=true;transl_table=11
JAGETS010000079.1	Genbank	pseudogene	13668	15335	.	+	.	ID=gene-J4731_21600;Name=betA;gbkey=Gene;gene=betA;gene_biotype=pseudogene;locus_tag=J4731_21600;pseudo=true
JAGETS010000079.1	Protein Homology	CDS	13668	15335	.	+	0	ID=cds-J4731_21600;Parent=gene-J4731_21600;Note=frameshifted;gbkey=CDS;gene=betA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004255502.1;locus_tag=J4731_21600;product=choline dehydrogenase;pseudo=true;transl_table=11
JAGETS010000079.1	Genbank	pseudogene	15669	16014	.	-	.	ID=gene-J4731_21605;Name=J4731_21605;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_21605;pseudo=true
JAGETS010000079.1	Protein Homology	CDS	15669	16014	.	-	0	ID=cds-J4731_21605;Parent=gene-J4731_21605;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004255498.1;locus_tag=J4731_21605;product=divalent-cation tolerance protein CutA;pseudo=true;transl_table=11
JAGETS010000079.1	Genbank	pseudogene	16640	18104	.	+	.	ID=gene-J4731_21610;Name=J4731_21610;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_21610;pseudo=true
JAGETS010000079.1	Protein Homology	CDS	16640	18104	.	+	0	ID=cds-J4731_21610;Parent=gene-J4731_21610;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004950104.1;locus_tag=J4731_21610;product=DASS family sodium-coupled anion symporter;pseudo=true;transl_table=11
JAGETS010000079.1	Genbank	pseudogene	18726	19583	.	+	.	ID=gene-J4731_21615;Name=J4731_21615;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_21615;pseudo=true
JAGETS010000079.1	Protein Homology	CDS	18726	19583	.	+	0	ID=cds-J4731_21615;Parent=gene-J4731_21615;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002436275.1;locus_tag=J4731_21615;product=DMT family transporter;pseudo=true;transl_table=11
JAGETS010000079.1	Genbank	pseudogene	20178	21229	.	-	.	ID=gene-J4731_21620;Name=J4731_21620;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_21620;pseudo=true
JAGETS010000079.1	Protein Homology	CDS	20178	21229	.	-	0	ID=cds-J4731_21620;Parent=gene-J4731_21620;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009637805.1;locus_tag=J4731_21620;product=NADH:flavin oxidoreductase/NADH oxidase;pseudo=true;transl_table=11
JAGETS010000079.1	Genbank	pseudogene	21791	23069	.	+	.	ID=gene-J4731_21625;Name=J4731_21625;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_21625;pseudo=true
JAGETS010000079.1	Protein Homology	CDS	21791	23069	.	+	0	ID=cds-J4731_21625;Parent=gene-J4731_21625;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008911632.1;locus_tag=J4731_21625;product=citrate transporter;pseudo=true;transl_table=11
JAGETS010000079.1	Genbank	pseudogene	23347	24124	.	+	.	ID=gene-J4731_21630;Name=J4731_21630;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_21630;pseudo=true
JAGETS010000079.1	Protein Homology	CDS	23347	24124	.	+	0	ID=cds-J4731_21630;Parent=gene-J4731_21630;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006662019.1;locus_tag=J4731_21630;product=VanW family protein;pseudo=true;transl_table=11
JAGETS010000079.1	Genbank	pseudogene	24374	25092	.	+	.	ID=gene-J4731_21635;Name=J4731_21635;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_21635;pseudo=true
JAGETS010000079.1	Protein Homology	CDS	24374	25092	.	+	0	ID=cds-J4731_21635;Parent=gene-J4731_21635;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004243300.1;locus_tag=J4731_21635;product=RNA ligase family protein;pseudo=true;transl_table=11
JAGETS010000079.1	Genbank	pseudogene	25064	25895	.	+	.	ID=gene-J4731_21640;Name=J4731_21640;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_21640;pseudo=true
JAGETS010000079.1	Protein Homology	CDS	25064	25895	.	+	0	ID=cds-J4731_21640;Parent=gene-J4731_21640;Note=frameshifted%3B incomplete%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006657563.1;locus_tag=J4731_21640;product=HD domain-containing protein;pseudo=true;transl_table=11
##sequence-region JAGETS010000008.1 1 270163
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=587
JAGETS010000008.1	Genbank	region	1	270163	.	+	.	ID=JAGETS010000008.1:1..270163;Dbxref=taxon:587;collected-by=NHLS;collection-date=2018;country=South Africa: Pretoria;gbkey=Src;isolation-source=stool;lat-lon=25.7479 S 28.2293 E;mol_type=genomic DNA;nat-host=porcine;strain=SG003
JAGETS010000008.1	Genbank	gene	335	622	.	+	.	ID=gene-J4731_04460;Name=J4731_04460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_04460
JAGETS010000008.1	Protein Homology	CDS	335	622	.	+	0	ID=cds-MBO1928775.1;Parent=gene-J4731_04460;Dbxref=NCBI_GP:MBO1928775.1;Name=MBO1928775.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005220970.1;locus_tag=J4731_04460;product=chromosome segregation protein ParM;protein_id=MBO1928775.1;transl_table=11
JAGETS010000008.1	Genbank	pseudogene	658	950	.	-	.	ID=gene-J4731_04465;Name=J4731_04465;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_04465;pseudo=true
JAGETS010000008.1	Protein Homology	CDS	658	950	.	-	0	ID=cds-J4731_04465;Parent=gene-J4731_04465;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005220971.1;locus_tag=J4731_04465;product=XRE family transcriptional regulator;pseudo=true;transl_table=11
JAGETS010000008.1	Genbank	pseudogene	955	1302	.	-	.	ID=gene-J4731_04470;Name=J4731_04470;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_04470;pseudo=true
JAGETS010000008.1	Protein Homology	CDS	955	1302	.	-	0	ID=cds-J4731_04470;Parent=gene-J4731_04470;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005220972.1;locus_tag=J4731_04470;product=type II toxin-antitoxin system RelE/ParE family toxin;pseudo=true;transl_table=11
JAGETS010000008.1	Genbank	pseudogene	1462	2008	.	+	.	ID=gene-J4731_04475;Name=J4731_04475;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_04475;pseudo=true
JAGETS010000008.1	Protein Homology	CDS	1462	2008	.	+	0	ID=cds-J4731_04475;Parent=gene-J4731_04475;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005220973.1;locus_tag=J4731_04475;product=transcriptional regulator;pseudo=true;transl_table=11
JAGETS010000008.1	Genbank	gene	2064	2249	.	-	.	ID=gene-J4731_04480;Name=J4731_04480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_04480
JAGETS010000008.1	GeneMarkS-2+	CDS	2064	2249	.	-	0	ID=cds-MBO1928776.1;Parent=gene-J4731_04480;Dbxref=NCBI_GP:MBO1928776.1;Name=MBO1928776.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_04480;product=hypothetical protein;protein_id=MBO1928776.1;transl_table=11
JAGETS010000008.1	Genbank	gene	2368	2535	.	+	.	ID=gene-J4731_04485;Name=J4731_04485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_04485
JAGETS010000008.1	Protein Homology	CDS	2368	2535	.	+	0	ID=cds-MBO1928777.1;Parent=gene-J4731_04485;Dbxref=NCBI_GP:MBO1928777.1;Name=MBO1928777.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005220975.1;locus_tag=J4731_04485;product=hypothetical protein;protein_id=MBO1928777.1;transl_table=11
JAGETS010000008.1	Genbank	gene	2593	2916	.	+	.	ID=gene-J4731_04490;Name=J4731_04490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_04490
JAGETS010000008.1	Protein Homology	CDS	2593	2916	.	+	0	ID=cds-MBO1928778.1;Parent=gene-J4731_04490;Dbxref=NCBI_GP:MBO1928778.1;Name=MBO1928778.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005220976.1;locus_tag=J4731_04490;product=hypothetical protein;protein_id=MBO1928778.1;transl_table=11
JAGETS010000008.1	Genbank	pseudogene	2909	3375	.	+	.	ID=gene-J4731_04495;Name=J4731_04495;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_04495;pseudo=true
JAGETS010000008.1	Protein Homology	CDS	2909	3375	.	+	0	ID=cds-J4731_04495;Parent=gene-J4731_04495;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005220977.1;locus_tag=J4731_04495;product=hypothetical protein;pseudo=true;transl_table=11
JAGETS010000008.1	Genbank	pseudogene	3390	3724	.	-	.	ID=gene-J4731_04500;Name=J4731_04500;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_04500;pseudo=true
JAGETS010000008.1	Protein Homology	CDS	3390	3724	.	-	0	ID=cds-J4731_04500;Parent=gene-J4731_04500;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005220978.1;locus_tag=J4731_04500;product=hypothetical protein;pseudo=true;transl_table=11
JAGETS010000008.1	Genbank	pseudogene	3819	4318	.	+	.	ID=gene-J4731_04505;Name=J4731_04505;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_04505;pseudo=true
JAGETS010000008.1	Protein Homology	CDS	3819	4318	.	+	0	ID=cds-J4731_04505;Parent=gene-J4731_04505;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005220979.1;locus_tag=J4731_04505;product=DUF1643 domain-containing protein;pseudo=true;transl_table=11
JAGETS010000008.1	Genbank	pseudogene	4305	4800	.	+	.	ID=gene-J4731_04510;Name=J4731_04510;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_04510;pseudo=true
JAGETS010000008.1	Protein Homology	CDS	4305	4800	.	+	0	ID=cds-J4731_04510;Parent=gene-J4731_04510;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005220980.1;locus_tag=J4731_04510;product=hypothetical protein;pseudo=true;transl_table=11
JAGETS010000008.1	Genbank	pseudogene	5011	5714	.	-	.	ID=gene-J4731_04515;Name=J4731_04515;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_04515;pseudo=true
JAGETS010000008.1	Protein Homology	CDS	5011	5714	.	-	0	ID=cds-J4731_04515;Parent=gene-J4731_04515;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005221000.1;locus_tag=J4731_04515;product=IS6-like element IS26 family transposase;pseudo=true;transl_table=11
JAGETS010000008.1	Genbank	pseudogene	5779	5958	.	-	.	ID=gene-J4731_04520;Name=J4731_04520;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_04520;pseudo=true
JAGETS010000008.1	Protein Homology	CDS	5779	5958	.	-	0	ID=cds-J4731_04520;Parent=gene-J4731_04520;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001549890.1;locus_tag=J4731_04520;product=helix-turn-helix transcriptional regulator;pseudo=true;transl_table=11
JAGETS010000008.1	Genbank	gene	6254	6958	.	+	.	ID=gene-J4731_04525;Name=J4731_04525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_04525
JAGETS010000008.1	Protein Homology	CDS	6254	6958	.	+	0	ID=cds-MBO1928779.1;Parent=gene-J4731_04525;Dbxref=NCBI_GP:MBO1928779.1;Name=MBO1928779.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005221000.1;locus_tag=J4731_04525;product=IS6-like element IS26 family transposase;protein_id=MBO1928779.1;transl_table=11
JAGETS010000008.1	Genbank	pseudogene	7013	7604	.	-	.	ID=gene-J4731_04530;Name=J4731_04530;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_04530;pseudo=true
JAGETS010000008.1	Protein Homology	CDS	7013	7604	.	-	0	ID=cds-J4731_04530;Parent=gene-J4731_04530;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000904941.1;locus_tag=J4731_04530;product=recombinase family protein;pseudo=true;transl_table=11
JAGETS010000008.1	Genbank	pseudogene	7665	8787	.	-	.	ID=gene-J4731_04535;Name=J4731_04535;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_04535;pseudo=true
JAGETS010000008.1	Protein Homology	CDS	7665	8787	.	-	0	ID=cds-J4731_04535;Parent=gene-J4731_04535;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006120389.1;locus_tag=J4731_04535;product=TniQ family protein;pseudo=true;transl_table=11
JAGETS010000008.1	Genbank	pseudogene	8876	9783	.	-	.	ID=gene-J4731_04540;Name=J4731_04540;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_04540;pseudo=true
JAGETS010000008.1	Protein Homology	CDS	8876	9783	.	-	0	ID=cds-J4731_04540;Parent=gene-J4731_04540;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003155746.1;locus_tag=J4731_04540;product=TniB family NTP-binding protein;pseudo=true;transl_table=11
JAGETS010000008.1	Genbank	pseudogene	9786	11464	.	-	.	ID=gene-J4731_04545;Name=J4731_04545;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_04545;pseudo=true
JAGETS010000008.1	Protein Homology	CDS	9786	11464	.	-	0	ID=cds-J4731_04545;Parent=gene-J4731_04545;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013124600.1;locus_tag=J4731_04545;product=transposase;pseudo=true;transl_table=11
JAGETS010000008.1	Genbank	gene	11623	11835	.	-	.	ID=gene-J4731_04550;Name=J4731_04550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_04550
JAGETS010000008.1	Protein Homology	CDS	11623	11835	.	-	0	ID=cds-MBO1928780.1;Parent=gene-J4731_04550;Dbxref=NCBI_GP:MBO1928780.1;Name=MBO1928780.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000993245.1;locus_tag=J4731_04550;product=DUF3330 domain-containing protein;protein_id=MBO1928780.1;transl_table=11
JAGETS010000008.1	Genbank	pseudogene	11898	12133	.	-	.	ID=gene-J4731_04555;Name=merE;gbkey=Gene;gene=merE;gene_biotype=pseudogene;locus_tag=J4731_04555;pseudo=true
JAGETS010000008.1	Protein Homology	CDS	11898	12133	.	-	0	ID=cds-J4731_04555;Parent=gene-J4731_04555;Note=frameshifted;gbkey=CDS;gene=merE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229645.1;locus_tag=J4731_04555;product=broad-spectrum mercury transporter MerE;pseudo=true;transl_table=11
JAGETS010000008.1	Genbank	gene	12130	12495	.	-	.	ID=gene-J4731_04560;Name=merD;gbkey=Gene;gene=merD;gene_biotype=protein_coding;locus_tag=J4731_04560
JAGETS010000008.1	Protein Homology	CDS	12130	12495	.	-	0	ID=cds-MBO1928781.1;Parent=gene-J4731_04560;Dbxref=NCBI_GP:MBO1928781.1;Name=MBO1928781.1;gbkey=CDS;gene=merD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001277466.1;locus_tag=J4731_04560;product=mercury resistance co-regulator MerD;protein_id=MBO1928781.1;transl_table=11
JAGETS010000008.1	Genbank	pseudogene	12512	14196	.	-	.	ID=gene-J4731_04565;Name=merA;gbkey=Gene;gene=merA;gene_biotype=pseudogene;locus_tag=J4731_04565;pseudo=true
JAGETS010000008.1	Protein Homology	CDS	12512	14196	.	-	0	ID=cds-J4731_04565;Parent=gene-J4731_04565;Note=frameshifted;gbkey=CDS;gene=merA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013722692.1;locus_tag=J4731_04565;product=mercury(II) reductase;pseudo=true;transl_table=11
JAGETS010000008.1	Genbank	gene	14235	14660	.	-	.	ID=gene-J4731_04570;Name=merC;gbkey=Gene;gene=merC;gene_biotype=protein_coding;locus_tag=J4731_04570
JAGETS010000008.1	Protein Homology	CDS	14235	14660	.	-	0	ID=cds-MBO1928782.1;Parent=gene-J4731_04570;Dbxref=NCBI_GP:MBO1928782.1;Name=MBO1928782.1;gbkey=CDS;gene=merC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000522997.1;locus_tag=J4731_04570;product=organomercurial transporter MerC;protein_id=MBO1928782.1;transl_table=11
JAGETS010000008.1	Genbank	pseudogene	14688	14977	.	-	.	ID=gene-J4731_04575;Name=merP;gbkey=Gene;gene=merP;gene_biotype=pseudogene;locus_tag=J4731_04575;pseudo=true
JAGETS010000008.1	Protein Homology	CDS	14688	14977	.	-	0	ID=cds-J4731_04575;Parent=gene-J4731_04575;Note=frameshifted;gbkey=CDS;gene=merP;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229640.1;locus_tag=J4731_04575;product=mercury resistance system periplasmic binding protein MerP;pseudo=true;transl_table=11
JAGETS010000008.1	Genbank	pseudogene	14977	15280	.	-	.	ID=gene-J4731_04580;Name=merT;gbkey=Gene;gene=merT;gene_biotype=pseudogene;locus_tag=J4731_04580;pseudo=true
JAGETS010000008.1	Protein Homology	CDS	14977	15280	.	-	0	ID=cds-J4731_04580;Parent=gene-J4731_04580;Note=frameshifted;gbkey=CDS;gene=merT;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229639.1;locus_tag=J4731_04580;product=mercuric ion transporter MerT;pseudo=true;transl_table=11
JAGETS010000008.1	Genbank	gene	15410	15886	.	+	.	ID=gene-J4731_04585;Name=merR;gbkey=Gene;gene=merR;gene_biotype=protein_coding;locus_tag=J4731_04585
JAGETS010000008.1	Protein Homology	CDS	15410	15886	.	+	0	ID=cds-MBO1928783.1;Parent=gene-J4731_04585;Dbxref=NCBI_GP:MBO1928783.1;Name=MBO1928783.1;gbkey=CDS;gene=merR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012824083.1;locus_tag=J4731_04585;product=Hg(II)-responsive transcriptional regulator;protein_id=MBO1928783.1;transl_table=11
JAGETS010000008.1	Genbank	gene	15990	16235	.	-	.	ID=gene-J4731_04590;Name=J4731_04590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_04590
JAGETS010000008.1	GeneMarkS-2+	CDS	15990	16235	.	-	0	ID=cds-MBO1928784.1;Parent=gene-J4731_04590;Dbxref=NCBI_GP:MBO1928784.1;Name=MBO1928784.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_04590;product=hypothetical protein;protein_id=MBO1928784.1;transl_table=11
JAGETS010000008.1	Genbank	gene	16374	16613	.	-	.	ID=gene-J4731_04595;Name=J4731_04595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_04595
JAGETS010000008.1	GeneMarkS-2+	CDS	16374	16613	.	-	0	ID=cds-MBO1928785.1;Parent=gene-J4731_04595;Dbxref=NCBI_GP:MBO1928785.1;Name=MBO1928785.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_04595;product=hypothetical protein;protein_id=MBO1928785.1;transl_table=11
JAGETS010000008.1	Genbank	gene	16861	17160	.	-	.	ID=gene-J4731_04600;Name=J4731_04600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_04600
JAGETS010000008.1	Protein Homology	CDS	16861	17160	.	-	0	ID=cds-MBO1928786.1;Parent=gene-J4731_04600;Dbxref=NCBI_GP:MBO1928786.1;Name=MBO1928786.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017300.1;locus_tag=J4731_04600;product=hypothetical protein;protein_id=MBO1928786.1;transl_table=11
JAGETS010000008.1	Genbank	gene	17234	17530	.	-	.	ID=gene-J4731_04605;Name=J4731_04605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_04605
JAGETS010000008.1	GeneMarkS-2+	CDS	17234	17530	.	-	0	ID=cds-MBO1928787.1;Parent=gene-J4731_04605;Dbxref=NCBI_GP:MBO1928787.1;Name=MBO1928787.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_04605;product=hypothetical protein;protein_id=MBO1928787.1;transl_table=11
JAGETS010000008.1	Genbank	gene	18182	18607	.	-	.	ID=gene-J4731_04610;Name=J4731_04610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_04610
JAGETS010000008.1	Protein Homology	CDS	18182	18607	.	-	0	ID=cds-MBO1928788.1;Parent=gene-J4731_04610;Dbxref=NCBI_GP:MBO1928788.1;Name=MBO1928788.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013235.1;locus_tag=J4731_04610;product=replication initiation protein;protein_id=MBO1928788.1;transl_table=11
JAGETS010000008.1	Genbank	gene	18642	18845	.	-	.	ID=gene-J4731_04615;Name=J4731_04615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_04615
JAGETS010000008.1	GeneMarkS-2+	CDS	18642	18845	.	-	0	ID=cds-MBO1928789.1;Parent=gene-J4731_04615;Dbxref=NCBI_GP:MBO1928789.1;Name=MBO1928789.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_04615;product=hypothetical protein;protein_id=MBO1928789.1;transl_table=11
JAGETS010000008.1	Genbank	gene	21040	21210	.	-	.	ID=gene-J4731_04620;Name=J4731_04620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_04620
JAGETS010000008.1	GeneMarkS-2+	CDS	21040	21210	.	-	0	ID=cds-MBO1928790.1;Parent=gene-J4731_04620;Dbxref=NCBI_GP:MBO1928790.1;Name=MBO1928790.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_04620;product=hypothetical protein;protein_id=MBO1928790.1;transl_table=11
JAGETS010000008.1	Genbank	gene	21545	21703	.	-	.	ID=gene-J4731_04625;Name=J4731_04625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_04625
JAGETS010000008.1	GeneMarkS-2+	CDS	21545	21703	.	-	0	ID=cds-MBO1928791.1;Parent=gene-J4731_04625;Dbxref=NCBI_GP:MBO1928791.1;Name=MBO1928791.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_04625;product=hypothetical protein;protein_id=MBO1928791.1;transl_table=11
JAGETS010000008.1	Genbank	pseudogene	21925	22880	.	-	.	ID=gene-J4731_04630;Name=J4731_04630;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_04630;pseudo=true
JAGETS010000008.1	Protein Homology	CDS	21925	22880	.	-	0	ID=cds-J4731_04630;Parent=gene-J4731_04630;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000959884.1;locus_tag=J4731_04630;product=recombinase;pseudo=true;transl_table=11
JAGETS010000008.1	Genbank	gene	23177	23545	.	-	.	ID=gene-J4731_04635;Name=J4731_04635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_04635
JAGETS010000008.1	Protein Homology	CDS	23177	23545	.	-	0	ID=cds-MBO1928792.1;Parent=gene-J4731_04635;Dbxref=NCBI_GP:MBO1928792.1;Name=MBO1928792.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025085.1;locus_tag=J4731_04635;product=DUF4942 domain-containing protein;protein_id=MBO1928792.1;transl_table=11
JAGETS010000008.1	Genbank	gene	25053	25256	.	-	.	ID=gene-J4731_04640;Name=J4731_04640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_04640
JAGETS010000008.1	GeneMarkS-2+	CDS	25053	25256	.	-	0	ID=cds-MBO1928793.1;Parent=gene-J4731_04640;Dbxref=NCBI_GP:MBO1928793.1;Name=MBO1928793.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_04640;product=hypothetical protein;protein_id=MBO1928793.1;transl_table=11
JAGETS010000008.1	Genbank	gene	25333	25494	.	-	.	ID=gene-J4731_04645;Name=J4731_04645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_04645
JAGETS010000008.1	GeneMarkS-2+	CDS	25333	25494	.	-	0	ID=cds-MBO1928794.1;Parent=gene-J4731_04645;Dbxref=NCBI_GP:MBO1928794.1;Name=MBO1928794.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_04645;product=hypothetical protein;protein_id=MBO1928794.1;transl_table=11
JAGETS010000008.1	Genbank	gene	26238	26456	.	+	.	ID=gene-J4731_04650;Name=J4731_04650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_04650
JAGETS010000008.1	GeneMarkS-2+	CDS	26238	26456	.	+	0	ID=cds-MBO1928795.1;Parent=gene-J4731_04650;Dbxref=NCBI_GP:MBO1928795.1;Name=MBO1928795.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_04650;product=hypothetical protein;protein_id=MBO1928795.1;transl_table=11
JAGETS010000008.1	Genbank	gene	27312	27623	.	+	.	ID=gene-J4731_04655;Name=J4731_04655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_04655
JAGETS010000008.1	Protein Homology	CDS	27312	27623	.	+	0	ID=cds-MBO1928796.1;Parent=gene-J4731_04655;Dbxref=NCBI_GP:MBO1928796.1;Name=MBO1928796.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017124.1;locus_tag=J4731_04655;product=hypothetical protein;protein_id=MBO1928796.1;transl_table=11
JAGETS010000008.1	Genbank	gene	27638	27883	.	+	.	ID=gene-J4731_04660;Name=J4731_04660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_04660
JAGETS010000008.1	GeneMarkS-2+	CDS	27638	27883	.	+	0	ID=cds-MBO1928797.1;Parent=gene-J4731_04660;Dbxref=NCBI_GP:MBO1928797.1;Name=MBO1928797.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_04660;product=hypothetical protein;protein_id=MBO1928797.1;transl_table=11
JAGETS010000008.1	Genbank	gene	27898	28080	.	+	.	ID=gene-J4731_04665;Name=J4731_04665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_04665
JAGETS010000008.1	GeneMarkS-2+	CDS	27898	28080	.	+	0	ID=cds-MBO1928798.1;Parent=gene-J4731_04665;Dbxref=NCBI_GP:MBO1928798.1;Name=MBO1928798.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_04665;product=hypothetical protein;protein_id=MBO1928798.1;transl_table=11
JAGETS010000008.1	Genbank	gene	28062	28460	.	+	.	ID=gene-J4731_04670;Name=J4731_04670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_04670
JAGETS010000008.1	GeneMarkS-2+	CDS	28062	28460	.	+	0	ID=cds-MBO1928799.1;Parent=gene-J4731_04670;Dbxref=NCBI_GP:MBO1928799.1;Name=MBO1928799.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_04670;product=hypothetical protein;protein_id=MBO1928799.1;transl_table=11
JAGETS010000008.1	Genbank	gene	28543	28734	.	-	.	ID=gene-J4731_04675;Name=J4731_04675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_04675
JAGETS010000008.1	GeneMarkS-2+	CDS	28543	28734	.	-	0	ID=cds-MBO1928800.1;Parent=gene-J4731_04675;Dbxref=NCBI_GP:MBO1928800.1;Name=MBO1928800.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_04675;product=hypothetical protein;protein_id=MBO1928800.1;transl_table=11
JAGETS010000008.1	Genbank	gene	28909	29055	.	-	.	ID=gene-J4731_04680;Name=J4731_04680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_04680
JAGETS010000008.1	GeneMarkS-2+	CDS	28909	29055	.	-	0	ID=cds-MBO1928801.1;Parent=gene-J4731_04680;Dbxref=NCBI_GP:MBO1928801.1;Name=MBO1928801.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_04680;product=hypothetical protein;protein_id=MBO1928801.1;transl_table=11
JAGETS010000008.1	Genbank	gene	29258	29773	.	-	.	ID=gene-J4731_04685;Name=traN;gbkey=Gene;gene=traN;gene_biotype=protein_coding;locus_tag=J4731_04685
JAGETS010000008.1	Protein Homology	CDS	29258	29773	.	-	0	ID=cds-MBO1928802.1;Parent=gene-J4731_04685;Dbxref=NCBI_GP:MBO1928802.1;Name=MBO1928802.1;gbkey=CDS;gene=traN;inference=COORDINATES: protein motif:HMM:NF018666.1;locus_tag=J4731_04685;product=conjugal transfer protein TraN;protein_id=MBO1928802.1;transl_table=11
JAGETS010000008.1	Genbank	gene	29835	30182	.	-	.	ID=gene-J4731_04690;Name=J4731_04690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_04690
JAGETS010000008.1	GeneMarkS-2+	CDS	29835	30182	.	-	0	ID=cds-MBO1928803.1;Parent=gene-J4731_04690;Dbxref=NCBI_GP:MBO1928803.1;Name=MBO1928803.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_04690;product=hypothetical protein;protein_id=MBO1928803.1;transl_table=11
JAGETS010000008.1	Genbank	gene	30186	30623	.	-	.	ID=gene-J4731_04695;Name=J4731_04695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_04695
JAGETS010000008.1	GeneMarkS-2+	CDS	30186	30623	.	-	0	ID=cds-MBO1928804.1;Parent=gene-J4731_04695;Dbxref=NCBI_GP:MBO1928804.1;Name=MBO1928804.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_04695;product=hypothetical protein;protein_id=MBO1928804.1;transl_table=11
JAGETS010000008.1	Genbank	gene	30855	31250	.	-	.	ID=gene-J4731_04700;Name=J4731_04700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_04700
JAGETS010000008.1	GeneMarkS-2+	CDS	30855	31250	.	-	0	ID=cds-MBO1928805.1;Parent=gene-J4731_04700;Dbxref=NCBI_GP:MBO1928805.1;Name=MBO1928805.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_04700;product=hypothetical protein;protein_id=MBO1928805.1;transl_table=11
JAGETS010000008.1	Genbank	gene	31714	32352	.	-	.	ID=gene-J4731_04705;Name=J4731_04705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_04705
JAGETS010000008.1	GeneMarkS-2+	CDS	31714	32352	.	-	0	ID=cds-MBO1928806.1;Parent=gene-J4731_04705;Dbxref=NCBI_GP:MBO1928806.1;Name=MBO1928806.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_04705;product=hypothetical protein;protein_id=MBO1928806.1;transl_table=11
JAGETS010000008.1	Genbank	gene	32409	32657	.	-	.	ID=gene-J4731_04710;Name=J4731_04710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_04710
JAGETS010000008.1	GeneMarkS-2+	CDS	32409	32657	.	-	0	ID=cds-MBO1928807.1;Parent=gene-J4731_04710;Dbxref=NCBI_GP:MBO1928807.1;Name=MBO1928807.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_04710;product=hypothetical protein;protein_id=MBO1928807.1;transl_table=11
JAGETS010000008.1	Genbank	gene	32665	33549	.	-	.	ID=gene-J4731_04715;Name=J4731_04715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_04715
JAGETS010000008.1	GeneMarkS-2+	CDS	32665	33549	.	-	0	ID=cds-MBO1928808.1;Parent=gene-J4731_04715;Dbxref=NCBI_GP:MBO1928808.1;Name=MBO1928808.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_04715;product=hypothetical protein;protein_id=MBO1928808.1;transl_table=11
JAGETS010000008.1	Genbank	gene	33546	34079	.	-	.	ID=gene-J4731_04720;Name=J4731_04720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_04720
JAGETS010000008.1	Protein Homology	CDS	33546	34079	.	-	0	ID=cds-MBO1928809.1;Parent=gene-J4731_04720;Dbxref=NCBI_GP:MBO1928809.1;Name=MBO1928809.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019530.1;locus_tag=J4731_04720;product=conjugal transfer protein TraG N-terminal domain-containing protein;protein_id=MBO1928809.1;transl_table=11
JAGETS010000008.1	Genbank	gene	34079	34834	.	-	.	ID=gene-J4731_04725;Name=J4731_04725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_04725
JAGETS010000008.1	Protein Homology	CDS	34079	34834	.	-	0	ID=cds-MBO1928810.1;Parent=gene-J4731_04725;Dbxref=NCBI_GP:MBO1928810.1;Name=MBO1928810.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019530.1;locus_tag=J4731_04725;product=conjugal transfer protein TraG N-terminal domain-containing protein;protein_id=MBO1928810.1;transl_table=11
JAGETS010000008.1	Genbank	gene	35325	36002	.	-	.	ID=gene-J4731_04730;Name=J4731_04730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_04730
JAGETS010000008.1	Protein Homology	CDS	35325	36002	.	-	0	ID=cds-MBO1928811.1;Parent=gene-J4731_04730;Dbxref=NCBI_GP:MBO1928811.1;Name=MBO1928811.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017892.1;locus_tag=J4731_04730;product=conjugal transfer protein TraH;protein_id=MBO1928811.1;transl_table=11
JAGETS010000008.1	Genbank	gene	35947	36195	.	-	.	ID=gene-J4731_04735;Name=J4731_04735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_04735
JAGETS010000008.1	Protein Homology	CDS	35947	36195	.	-	0	ID=cds-MBO1928812.1;Parent=gene-J4731_04735;Dbxref=NCBI_GP:MBO1928812.1;Name=MBO1928812.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017892.1;locus_tag=J4731_04735;product=conjugal transfer protein TraH;protein_id=MBO1928812.1;transl_table=11
JAGETS010000008.1	Genbank	pseudogene	36633	36833	.	-	.	ID=gene-J4731_04740;Name=traF;gbkey=Gene;gene=traF;gene_biotype=pseudogene;locus_tag=J4731_04740;pseudo=true
JAGETS010000008.1	Protein Homology	CDS	36633	36833	.	-	0	ID=cds-J4731_04740;Parent=gene-J4731_04740;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;gene=traF;inference=COORDINATES: protein motif:HMM:NF025105.1;locus_tag=J4731_04740;product=conjugal transfer protein TraF;pseudo=true;transl_table=11
JAGETS010000008.1	Genbank	gene	36779	37249	.	-	.	ID=gene-J4731_04745;Name=traF;gbkey=Gene;gene=traF;gene_biotype=protein_coding;locus_tag=J4731_04745
JAGETS010000008.1	Protein Homology	CDS	36779	37249	.	-	0	ID=cds-MBO1928813.1;Parent=gene-J4731_04745;Dbxref=NCBI_GP:MBO1928813.1;Name=MBO1928813.1;gbkey=CDS;gene=traF;inference=COORDINATES: protein motif:HMM:NF025105.1;locus_tag=J4731_04745;product=conjugal transfer protein TraF;protein_id=MBO1928813.1;transl_table=11
JAGETS010000008.1	Genbank	gene	37236	37382	.	-	.	ID=gene-J4731_04750;Name=J4731_04750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_04750
JAGETS010000008.1	GeneMarkS-2+	CDS	37236	37382	.	-	0	ID=cds-MBO1928814.1;Parent=gene-J4731_04750;Dbxref=NCBI_GP:MBO1928814.1;Name=MBO1928814.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_04750;product=hypothetical protein;protein_id=MBO1928814.1;transl_table=11
JAGETS010000008.1	Genbank	gene	37637	38014	.	-	.	ID=gene-J4731_04755;Name=J4731_04755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_04755
JAGETS010000008.1	GeneMarkS-2+	CDS	37637	38014	.	-	0	ID=cds-MBO1928815.1;Parent=gene-J4731_04755;Dbxref=NCBI_GP:MBO1928815.1;Name=MBO1928815.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_04755;product=hypothetical protein;protein_id=MBO1928815.1;transl_table=11
JAGETS010000008.1	Genbank	gene	38023	38166	.	-	.	ID=gene-J4731_04760;Name=J4731_04760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_04760
JAGETS010000008.1	GeneMarkS-2+	CDS	38023	38166	.	-	0	ID=cds-MBO1928816.1;Parent=gene-J4731_04760;Dbxref=NCBI_GP:MBO1928816.1;Name=MBO1928816.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_04760;product=hypothetical protein;protein_id=MBO1928816.1;transl_table=11
JAGETS010000008.1	Genbank	gene	38629	38949	.	+	.	ID=gene-J4731_04765;Name=J4731_04765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_04765
JAGETS010000008.1	GeneMarkS-2+	CDS	38629	38949	.	+	0	ID=cds-MBO1928817.1;Parent=gene-J4731_04765;Dbxref=NCBI_GP:MBO1928817.1;Name=MBO1928817.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_04765;product=hypothetical protein;protein_id=MBO1928817.1;transl_table=11
JAGETS010000008.1	Genbank	gene	39384	39569	.	-	.	ID=gene-J4731_04770;Name=J4731_04770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_04770
JAGETS010000008.1	GeneMarkS-2+	CDS	39384	39569	.	-	0	ID=cds-MBO1928818.1;Parent=gene-J4731_04770;Dbxref=NCBI_GP:MBO1928818.1;Name=MBO1928818.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_04770;product=hypothetical protein;protein_id=MBO1928818.1;transl_table=11
JAGETS010000008.1	Genbank	gene	39634	40128	.	-	.	ID=gene-J4731_04775;Name=J4731_04775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_04775
JAGETS010000008.1	GeneMarkS-2+	CDS	39634	40128	.	-	0	ID=cds-MBO1928819.1;Parent=gene-J4731_04775;Dbxref=NCBI_GP:MBO1928819.1;Name=MBO1928819.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_04775;product=hypothetical protein;protein_id=MBO1928819.1;transl_table=11
JAGETS010000008.1	Genbank	gene	40412	40633	.	-	.	ID=gene-J4731_04780;Name=J4731_04780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_04780
JAGETS010000008.1	GeneMarkS-2+	CDS	40412	40633	.	-	0	ID=cds-MBO1928820.1;Parent=gene-J4731_04780;Dbxref=NCBI_GP:MBO1928820.1;Name=MBO1928820.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_04780;product=hypothetical protein;protein_id=MBO1928820.1;transl_table=11
JAGETS010000008.1	Genbank	pseudogene	40953	41920	.	-	.	ID=gene-J4731_04785;Name=J4731_04785;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_04785;pseudo=true
JAGETS010000008.1	Protein Homology	CDS	40953	41920	.	-	0	ID=cds-J4731_04785;Parent=gene-J4731_04785;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007372241.1;locus_tag=J4731_04785;product=AAA family ATPase;pseudo=true;transl_table=11
JAGETS010000008.1	Genbank	gene	42077	42340	.	-	.	ID=gene-J4731_04790;Name=J4731_04790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_04790
JAGETS010000008.1	GeneMarkS-2+	CDS	42077	42340	.	-	0	ID=cds-MBO1928821.1;Parent=gene-J4731_04790;Dbxref=NCBI_GP:MBO1928821.1;Name=MBO1928821.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_04790;product=hypothetical protein;protein_id=MBO1928821.1;transl_table=11
JAGETS010000008.1	Genbank	gene	42378	42731	.	-	.	ID=gene-J4731_04795;Name=J4731_04795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_04795
JAGETS010000008.1	GeneMarkS-2+	CDS	42378	42731	.	-	0	ID=cds-MBO1928822.1;Parent=gene-J4731_04795;Dbxref=NCBI_GP:MBO1928822.1;Name=MBO1928822.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_04795;product=hypothetical protein;protein_id=MBO1928822.1;transl_table=11
JAGETS010000008.1	Genbank	gene	42770	43093	.	-	.	ID=gene-J4731_04800;Name=J4731_04800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_04800
JAGETS010000008.1	GeneMarkS-2+	CDS	42770	43093	.	-	0	ID=cds-MBO1928823.1;Parent=gene-J4731_04800;Dbxref=NCBI_GP:MBO1928823.1;Name=MBO1928823.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_04800;product=hypothetical protein;protein_id=MBO1928823.1;transl_table=11
JAGETS010000008.1	Genbank	gene	43084	43416	.	-	.	ID=gene-J4731_04805;Name=J4731_04805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_04805
JAGETS010000008.1	Protein Homology	CDS	43084	43416	.	-	0	ID=cds-MBO1928824.1;Parent=gene-J4731_04805;Dbxref=NCBI_GP:MBO1928824.1;Name=MBO1928824.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021128.1;locus_tag=J4731_04805;product=YqaJ viral recombinase family protein;protein_id=MBO1928824.1;transl_table=11
JAGETS010000008.1	Genbank	gene	43586	44107	.	-	.	ID=gene-J4731_04810;Name=J4731_04810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_04810
JAGETS010000008.1	GeneMarkS-2+	CDS	43586	44107	.	-	0	ID=cds-MBO1928825.1;Parent=gene-J4731_04810;Dbxref=NCBI_GP:MBO1928825.1;Name=MBO1928825.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_04810;product=hypothetical protein;protein_id=MBO1928825.1;transl_table=11
JAGETS010000008.1	Genbank	gene	44357	44650	.	-	.	ID=gene-J4731_04815;Name=J4731_04815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_04815
JAGETS010000008.1	Protein Homology	CDS	44357	44650	.	-	0	ID=cds-MBO1928826.1;Parent=gene-J4731_04815;Dbxref=NCBI_GP:MBO1928826.1;Name=MBO1928826.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015776.1;locus_tag=J4731_04815;product=recombinase RecT;protein_id=MBO1928826.1;transl_table=11
JAGETS010000008.1	Genbank	gene	44921	45373	.	-	.	ID=gene-J4731_04820;Name=J4731_04820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_04820
JAGETS010000008.1	GeneMarkS-2+	CDS	44921	45373	.	-	0	ID=cds-MBO1928827.1;Parent=gene-J4731_04820;Dbxref=NCBI_GP:MBO1928827.1;Name=MBO1928827.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_04820;product=hypothetical protein;protein_id=MBO1928827.1;transl_table=11
JAGETS010000008.1	Genbank	gene	45586	45849	.	-	.	ID=gene-J4731_04825;Name=J4731_04825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_04825
JAGETS010000008.1	GeneMarkS-2+	CDS	45586	45849	.	-	0	ID=cds-MBO1928828.1;Parent=gene-J4731_04825;Dbxref=NCBI_GP:MBO1928828.1;Name=MBO1928828.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_04825;product=hypothetical protein;protein_id=MBO1928828.1;transl_table=11
JAGETS010000008.1	Genbank	gene	46592	47158	.	+	.	ID=gene-J4731_04830;Name=J4731_04830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_04830
JAGETS010000008.1	GeneMarkS-2+	CDS	46592	47158	.	+	0	ID=cds-MBO1928829.1;Parent=gene-J4731_04830;Dbxref=NCBI_GP:MBO1928829.1;Name=MBO1928829.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_04830;product=hypothetical protein;protein_id=MBO1928829.1;transl_table=11
JAGETS010000008.1	Genbank	gene	47686	48699	.	-	.	ID=gene-J4731_04835;Name=J4731_04835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_04835
JAGETS010000008.1	Protein Homology	CDS	47686	48699	.	-	0	ID=cds-MBO1928830.1;Parent=gene-J4731_04835;Dbxref=NCBI_GP:MBO1928830.1;Name=MBO1928830.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018536.1;locus_tag=J4731_04835;product=TraU family protein;protein_id=MBO1928830.1;transl_table=11
JAGETS010000008.1	Genbank	gene	49012	49566	.	-	.	ID=gene-J4731_04840;Name=J4731_04840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_04840
JAGETS010000008.1	Protein Homology	CDS	49012	49566	.	-	0	ID=cds-MBO1928831.1;Parent=gene-J4731_04840;Dbxref=NCBI_GP:MBO1928831.1;Name=MBO1928831.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021209.1;locus_tag=J4731_04840;product=hypothetical protein;protein_id=MBO1928831.1;transl_table=11
JAGETS010000008.1	Genbank	gene	49563	49754	.	-	.	ID=gene-J4731_04845;Name=J4731_04845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_04845
JAGETS010000008.1	GeneMarkS-2+	CDS	49563	49754	.	-	0	ID=cds-MBO1928832.1;Parent=gene-J4731_04845;Dbxref=NCBI_GP:MBO1928832.1;Name=MBO1928832.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_04845;product=hypothetical protein;protein_id=MBO1928832.1;transl_table=11
JAGETS010000008.1	Genbank	pseudogene	49906	50351	.	-	.	ID=gene-J4731_04850;Name=lepB;gbkey=Gene;gene=lepB;gene_biotype=pseudogene;locus_tag=J4731_04850;pseudo=true
JAGETS010000008.1	Protein Homology	CDS	49906	50351	.	-	0	ID=cds-J4731_04850;Parent=gene-J4731_04850;Note=frameshifted;gbkey=CDS;gene=lepB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007372232.1;locus_tag=J4731_04850;product=signal peptidase I;pseudo=true;transl_table=11
JAGETS010000008.1	Genbank	pseudogene	50574	53161	.	-	.	ID=gene-J4731_04855;Name=traC;gbkey=Gene;gene=traC;gene_biotype=pseudogene;locus_tag=J4731_04855;pseudo=true
JAGETS010000008.1	Protein Homology	CDS	50574	53161	.	-	0	ID=cds-J4731_04855;Parent=gene-J4731_04855;Note=frameshifted;gbkey=CDS;gene=traC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007372230.1;locus_tag=J4731_04855;product=type IV secretion system protein TraC;pseudo=true;transl_table=11
JAGETS010000008.1	Genbank	gene	53243	53647	.	-	.	ID=gene-J4731_04860;Name=J4731_04860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_04860
JAGETS010000008.1	GeneMarkS-2+	CDS	53243	53647	.	-	0	ID=cds-MBO1928833.1;Parent=gene-J4731_04860;Dbxref=NCBI_GP:MBO1928833.1;Name=MBO1928833.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_04860;product=hypothetical protein;protein_id=MBO1928833.1;transl_table=11
JAGETS010000008.1	Genbank	gene	54038	54322	.	-	.	ID=gene-J4731_04865;Name=J4731_04865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_04865
JAGETS010000008.1	Protein Homology	CDS	54038	54322	.	-	0	ID=cds-MBO1928834.1;Parent=gene-J4731_04865;Dbxref=NCBI_GP:MBO1928834.1;Name=MBO1928834.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021212.1;locus_tag=J4731_04865;product=TraV family lipoprotein;protein_id=MBO1928834.1;transl_table=11
JAGETS010000008.1	Genbank	gene	54337	54549	.	-	.	ID=gene-J4731_04870;Name=J4731_04870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_04870
JAGETS010000008.1	Protein Homology	CDS	54337	54549	.	-	0	ID=cds-MBO1928835.1;Parent=gene-J4731_04870;Dbxref=NCBI_GP:MBO1928835.1;Name=MBO1928835.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011899401.1;locus_tag=J4731_04870;product=TraV family lipoprotein;protein_id=MBO1928835.1;transl_table=11
JAGETS010000008.1	Genbank	gene	54566	55795	.	-	.	ID=gene-J4731_04875;Name=J4731_04875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_04875
JAGETS010000008.1	Protein Homology	CDS	54566	55795	.	-	0	ID=cds-MBO1928836.1;Parent=gene-J4731_04875;Dbxref=NCBI_GP:MBO1928836.1;Name=MBO1928836.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015688.1;locus_tag=J4731_04875;product=TraB/VirB10 family protein;protein_id=MBO1928836.1;transl_table=11
JAGETS010000008.1	Genbank	gene	55854	56270	.	-	.	ID=gene-J4731_04880;Name=J4731_04880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_04880
JAGETS010000008.1	GeneMarkS-2+	CDS	55854	56270	.	-	0	ID=cds-MBO1928837.1;Parent=gene-J4731_04880;Dbxref=NCBI_GP:MBO1928837.1;Name=MBO1928837.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_04880;product=hypothetical protein;protein_id=MBO1928837.1;transl_table=11
JAGETS010000008.1	Genbank	gene	56507	56851	.	-	.	ID=gene-J4731_04885;Name=J4731_04885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_04885
JAGETS010000008.1	GeneMarkS-2+	CDS	56507	56851	.	-	0	ID=cds-MBO1928838.1;Parent=gene-J4731_04885;Dbxref=NCBI_GP:MBO1928838.1;Name=MBO1928838.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_04885;product=hypothetical protein;protein_id=MBO1928838.1;transl_table=11
JAGETS010000008.1	Genbank	gene	56844	57482	.	-	.	ID=gene-J4731_04890;Name=J4731_04890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_04890
JAGETS010000008.1	Protein Homology	CDS	56844	57482	.	-	0	ID=cds-MBO1928839.1;Parent=gene-J4731_04890;Dbxref=NCBI_GP:MBO1928839.1;Name=MBO1928839.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017152.1;locus_tag=J4731_04890;product=hypothetical protein;protein_id=MBO1928839.1;transl_table=11
JAGETS010000008.1	Genbank	pseudogene	57496	57779	.	-	.	ID=gene-J4731_04895;Name=traL;gbkey=Gene;gene=traL;gene_biotype=pseudogene;locus_tag=J4731_04895;pseudo=true
JAGETS010000008.1	Protein Homology	CDS	57496	57779	.	-	0	ID=cds-J4731_04895;Parent=gene-J4731_04895;Note=frameshifted;gbkey=CDS;gene=traL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008786649.1;locus_tag=J4731_04895;product=type IV conjugative transfer system protein TraL;pseudo=true;transl_table=11
JAGETS010000008.1	Genbank	gene	57801	58277	.	-	.	ID=gene-J4731_04900;Name=J4731_04900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_04900
JAGETS010000008.1	Protein Homology	CDS	57801	58277	.	-	0	ID=cds-MBO1928840.1;Parent=gene-J4731_04900;Dbxref=NCBI_GP:MBO1928840.1;Name=MBO1928840.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024853.1;locus_tag=J4731_04900;product=thioredoxin domain-containing protein;protein_id=MBO1928840.1;transl_table=11
JAGETS010000008.1	Genbank	gene	58584	58865	.	-	.	ID=gene-J4731_04905;Name=J4731_04905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_04905
JAGETS010000008.1	GeneMarkS-2+	CDS	58584	58865	.	-	0	ID=cds-MBO1928841.1;Parent=gene-J4731_04905;Dbxref=NCBI_GP:MBO1928841.1;Name=MBO1928841.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_04905;product=hypothetical protein;protein_id=MBO1928841.1;transl_table=11
JAGETS010000008.1	Genbank	gene	60300	60707	.	-	.	ID=gene-J4731_04910;Name=J4731_04910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_04910
JAGETS010000008.1	GeneMarkS-2+	CDS	60300	60707	.	-	0	ID=cds-MBO1928842.1;Parent=gene-J4731_04910;Dbxref=NCBI_GP:MBO1928842.1;Name=MBO1928842.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_04910;product=hypothetical protein;protein_id=MBO1928842.1;transl_table=11
JAGETS010000008.1	Genbank	gene	60734	61864	.	-	.	ID=gene-J4731_04915;Name=J4731_04915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_04915
JAGETS010000008.1	Protein Homology	CDS	60734	61864	.	-	0	ID=cds-MBO1928843.1;Parent=gene-J4731_04915;Dbxref=NCBI_GP:MBO1928843.1;Name=MBO1928843.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021897.1;locus_tag=J4731_04915;product=DUF87 domain-containing protein;protein_id=MBO1928843.1;transl_table=11
JAGETS010000008.1	Genbank	gene	61857	62111	.	-	.	ID=gene-J4731_04920;Name=J4731_04920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_04920
JAGETS010000008.1	GeneMarkS-2+	CDS	61857	62111	.	-	0	ID=cds-MBO1928844.1;Parent=gene-J4731_04920;Dbxref=NCBI_GP:MBO1928844.1;Name=MBO1928844.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_04920;product=hypothetical protein;protein_id=MBO1928844.1;transl_table=11
JAGETS010000008.1	Genbank	gene	62105	62728	.	-	.	ID=gene-J4731_04925;Name=J4731_04925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_04925
JAGETS010000008.1	GeneMarkS-2+	CDS	62105	62728	.	-	0	ID=cds-MBO1928845.1;Parent=gene-J4731_04925;Dbxref=NCBI_GP:MBO1928845.1;Name=MBO1928845.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_04925;product=hypothetical protein;protein_id=MBO1928845.1;transl_table=11
JAGETS010000008.1	Genbank	gene	62815	63042	.	-	.	ID=gene-J4731_04930;Name=J4731_04930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_04930
JAGETS010000008.1	GeneMarkS-2+	CDS	62815	63042	.	-	0	ID=cds-MBO1928846.1;Parent=gene-J4731_04930;Dbxref=NCBI_GP:MBO1928846.1;Name=MBO1928846.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_04930;product=hypothetical protein;protein_id=MBO1928846.1;transl_table=11
JAGETS010000008.1	Genbank	gene	63098	63385	.	-	.	ID=gene-J4731_04935;Name=J4731_04935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_04935
JAGETS010000008.1	Protein Homology	CDS	63098	63385	.	-	0	ID=cds-MBO1928847.1;Parent=gene-J4731_04935;Dbxref=NCBI_GP:MBO1928847.1;Name=MBO1928847.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019153.1;locus_tag=J4731_04935;product=TraI domain-containing protein;protein_id=MBO1928847.1;transl_table=11
JAGETS010000008.1	Genbank	gene	63587	64219	.	-	.	ID=gene-J4731_04940;Name=J4731_04940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_04940
JAGETS010000008.1	Protein Homology	CDS	63587	64219	.	-	0	ID=cds-MBO1928848.1;Parent=gene-J4731_04940;Dbxref=NCBI_GP:MBO1928848.1;Name=MBO1928848.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019153.1;locus_tag=J4731_04940;product=TraI domain-containing protein;protein_id=MBO1928848.1;transl_table=11
JAGETS010000008.1	Genbank	gene	64368	65018	.	+	.	ID=gene-J4731_04945;Name=J4731_04945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_04945
JAGETS010000008.1	GeneMarkS-2+	CDS	64368	65018	.	+	0	ID=cds-MBO1928849.1;Parent=gene-J4731_04945;Dbxref=NCBI_GP:MBO1928849.1;Name=MBO1928849.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_04945;product=hypothetical protein;protein_id=MBO1928849.1;transl_table=11
JAGETS010000008.1	Genbank	gene	65034	65627	.	+	.	ID=gene-J4731_04950;Name=J4731_04950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_04950
JAGETS010000008.1	Protein Homology	CDS	65034	65627	.	+	0	ID=cds-MBO1928850.1;Parent=gene-J4731_04950;Dbxref=NCBI_GP:MBO1928850.1;Name=MBO1928850.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024853.1;locus_tag=J4731_04950;product=thioredoxin domain-containing protein;protein_id=MBO1928850.1;transl_table=11
JAGETS010000008.1	Genbank	gene	65606	65854	.	+	.	ID=gene-J4731_04955;Name=J4731_04955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_04955
JAGETS010000008.1	Protein Homology	CDS	65606	65854	.	+	0	ID=cds-MBO1928851.1;Parent=gene-J4731_04955;Dbxref=NCBI_GP:MBO1928851.1;Name=MBO1928851.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013488.1;locus_tag=J4731_04955;product=DsbA family protein;protein_id=MBO1928851.1;transl_table=11
JAGETS010000008.1	Genbank	gene	65999	66310	.	+	.	ID=gene-J4731_04960;Name=J4731_04960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_04960
JAGETS010000008.1	Protein Homology	CDS	65999	66310	.	+	0	ID=cds-MBO1928852.1;Parent=gene-J4731_04960;Dbxref=NCBI_GP:MBO1928852.1;Name=MBO1928852.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007372215.1;locus_tag=J4731_04960;product=hypothetical protein;protein_id=MBO1928852.1;transl_table=11
JAGETS010000008.1	Genbank	gene	67039	67431	.	+	.	ID=gene-J4731_04965;Name=J4731_04965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_04965
JAGETS010000008.1	Protein Homology	CDS	67039	67431	.	+	0	ID=cds-MBO1928853.1;Parent=gene-J4731_04965;Dbxref=NCBI_GP:MBO1928853.1;Name=MBO1928853.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012789.1;locus_tag=J4731_04965;product=UvrD-helicase domain-containing protein;protein_id=MBO1928853.1;transl_table=11
JAGETS010000008.1	Genbank	gene	67419	67823	.	+	.	ID=gene-J4731_04970;Name=J4731_04970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_04970
JAGETS010000008.1	GeneMarkS-2+	CDS	67419	67823	.	+	0	ID=cds-MBO1928854.1;Parent=gene-J4731_04970;Dbxref=NCBI_GP:MBO1928854.1;Name=MBO1928854.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_04970;product=hypothetical protein;protein_id=MBO1928854.1;transl_table=11
JAGETS010000008.1	Genbank	gene	68426	68602	.	-	.	ID=gene-J4731_04975;Name=J4731_04975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_04975
JAGETS010000008.1	GeneMarkS-2+	CDS	68426	68602	.	-	0	ID=cds-MBO1928855.1;Parent=gene-J4731_04975;Dbxref=NCBI_GP:MBO1928855.1;Name=MBO1928855.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_04975;product=hypothetical protein;protein_id=MBO1928855.1;transl_table=11
JAGETS010000008.1	Genbank	gene	68697	68951	.	-	.	ID=gene-J4731_04980;Name=J4731_04980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_04980
JAGETS010000008.1	GeneMarkS-2+	CDS	68697	68951	.	-	0	ID=cds-MBO1928856.1;Parent=gene-J4731_04980;Dbxref=NCBI_GP:MBO1928856.1;Name=MBO1928856.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_04980;product=hypothetical protein;protein_id=MBO1928856.1;transl_table=11
JAGETS010000008.1	Genbank	gene	69190	69816	.	-	.	ID=gene-J4731_04985;Name=J4731_04985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_04985
JAGETS010000008.1	GeneMarkS-2+	CDS	69190	69816	.	-	0	ID=cds-MBO1928857.1;Parent=gene-J4731_04985;Dbxref=NCBI_GP:MBO1928857.1;Name=MBO1928857.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_04985;product=hypothetical protein;protein_id=MBO1928857.1;transl_table=11
JAGETS010000008.1	Genbank	gene	69836	70384	.	-	.	ID=gene-J4731_04990;Name=J4731_04990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_04990
JAGETS010000008.1	GeneMarkS-2+	CDS	69836	70384	.	-	0	ID=cds-MBO1928858.1;Parent=gene-J4731_04990;Dbxref=NCBI_GP:MBO1928858.1;Name=MBO1928858.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_04990;product=hypothetical protein;protein_id=MBO1928858.1;transl_table=11
JAGETS010000008.1	Genbank	pseudogene	70854	71078	.	-	.	ID=gene-J4731_04995;Name=J4731_04995;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_04995;pseudo=true
JAGETS010000008.1	Protein Homology	CDS	70854	71078	.	-	0	ID=cds-J4731_04995;Parent=gene-J4731_04995;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016362.1;locus_tag=J4731_04995;product=restriction endonuclease;pseudo=true;transl_table=11
JAGETS010000008.1	Genbank	gene	71039	71221	.	-	.	ID=gene-J4731_05000;Name=J4731_05000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_05000
JAGETS010000008.1	Protein Homology	CDS	71039	71221	.	-	0	ID=cds-MBO1928859.1;Parent=gene-J4731_05000;Dbxref=NCBI_GP:MBO1928859.1;Name=MBO1928859.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016362.1;locus_tag=J4731_05000;product=restriction endonuclease;protein_id=MBO1928859.1;transl_table=11
JAGETS010000008.1	Genbank	gene	71928	72371	.	-	.	ID=gene-J4731_05005;Name=J4731_05005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_05005
JAGETS010000008.1	GeneMarkS-2+	CDS	71928	72371	.	-	0	ID=cds-MBO1928860.1;Parent=gene-J4731_05005;Dbxref=NCBI_GP:MBO1928860.1;Name=MBO1928860.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_05005;product=hypothetical protein;protein_id=MBO1928860.1;transl_table=11
JAGETS010000008.1	Genbank	gene	72358	73206	.	-	.	ID=gene-J4731_05010;Name=lepB;gbkey=Gene;gene=lepB;gene_biotype=protein_coding;locus_tag=J4731_05010
JAGETS010000008.1	Protein Homology	CDS	72358	73206	.	-	0	ID=cds-MBO1928861.1;Parent=gene-J4731_05010;Dbxref=NCBI_GP:MBO1928861.1;Name=MBO1928861.1;gbkey=CDS;gene=lepB;inference=COORDINATES: protein motif:HMM:TIGR02227.1;locus_tag=J4731_05010;product=signal peptidase I;protein_id=MBO1928861.1;transl_table=11
JAGETS010000008.1	Genbank	gene	73928	74218	.	-	.	ID=gene-J4731_05015;Name=J4731_05015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_05015
JAGETS010000008.1	GeneMarkS-2+	CDS	73928	74218	.	-	0	ID=cds-MBO1928862.1;Parent=gene-J4731_05015;Dbxref=NCBI_GP:MBO1928862.1;Name=MBO1928862.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_05015;product=hypothetical protein;protein_id=MBO1928862.1;transl_table=11
JAGETS010000008.1	Genbank	gene	74239	74610	.	-	.	ID=gene-J4731_05020;Name=J4731_05020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_05020
JAGETS010000008.1	GeneMarkS-2+	CDS	74239	74610	.	-	0	ID=cds-MBO1928863.1;Parent=gene-J4731_05020;Dbxref=NCBI_GP:MBO1928863.1;Name=MBO1928863.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_05020;product=hypothetical protein;protein_id=MBO1928863.1;transl_table=11
JAGETS010000008.1	Genbank	gene	74954	75271	.	-	.	ID=gene-J4731_05025;Name=J4731_05025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_05025
JAGETS010000008.1	GeneMarkS-2+	CDS	74954	75271	.	-	0	ID=cds-MBO1928864.1;Parent=gene-J4731_05025;Dbxref=NCBI_GP:MBO1928864.1;Name=MBO1928864.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_05025;product=hypothetical protein;protein_id=MBO1928864.1;transl_table=11
JAGETS010000008.1	Genbank	gene	75779	75949	.	-	.	ID=gene-J4731_05030;Name=J4731_05030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_05030
JAGETS010000008.1	Protein Homology	CDS	75779	75949	.	-	0	ID=cds-MBO1928865.1;Parent=gene-J4731_05030;Dbxref=NCBI_GP:MBO1928865.1;Name=MBO1928865.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012798.1;locus_tag=J4731_05030;product=site-specific integrase;protein_id=MBO1928865.1;transl_table=11
JAGETS010000008.1	Genbank	gene	76036	76797	.	-	.	ID=gene-J4731_05035;Name=J4731_05035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_05035
JAGETS010000008.1	Protein Homology	CDS	76036	76797	.	-	0	ID=cds-MBO1928866.1;Parent=gene-J4731_05035;Dbxref=NCBI_GP:MBO1928866.1;Name=MBO1928866.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012798.1;locus_tag=J4731_05035;product=site-specific integrase;protein_id=MBO1928866.1;transl_table=11
JAGETS010000008.1	Genbank	gene	77395	77832	.	+	.	ID=gene-J4731_05040;Name=J4731_05040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_05040
JAGETS010000008.1	GeneMarkS-2+	CDS	77395	77832	.	+	0	ID=cds-MBO1928867.1;Parent=gene-J4731_05040;Dbxref=NCBI_GP:MBO1928867.1;Name=MBO1928867.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_05040;product=hypothetical protein;protein_id=MBO1928867.1;transl_table=11
JAGETS010000008.1	Genbank	gene	78282	78425	.	+	.	ID=gene-J4731_05045;Name=J4731_05045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_05045
JAGETS010000008.1	Protein Homology	CDS	78282	78425	.	+	0	ID=cds-MBO1928868.1;Parent=gene-J4731_05045;Dbxref=NCBI_GP:MBO1928868.1;Name=MBO1928868.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004247166.1;locus_tag=J4731_05045;product=type I toxin-antitoxin system Hok family toxin;protein_id=MBO1928868.1;transl_table=11
JAGETS010000008.1	Genbank	pseudogene	78915	79246	.	-	.	ID=gene-J4731_05050;Name=mazF;gbkey=Gene;gene=mazF;gene_biotype=pseudogene;locus_tag=J4731_05050;pseudo=true
JAGETS010000008.1	Protein Homology	CDS	78915	79246	.	-	0	ID=cds-J4731_05050;Parent=gene-J4731_05050;Note=frameshifted;gbkey=CDS;gene=mazF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013199966.1;locus_tag=J4731_05050;product=endoribonuclease MazF;pseudo=true;transl_table=11
JAGETS010000008.1	Genbank	gene	79246	79428	.	-	.	ID=gene-J4731_05055;Name=J4731_05055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_05055
JAGETS010000008.1	Protein Homology	CDS	79246	79428	.	-	0	ID=cds-MBO1928869.1;Parent=gene-J4731_05055;Dbxref=NCBI_GP:MBO1928869.1;Name=MBO1928869.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000195442.1;locus_tag=J4731_05055;product=PbsX family transcriptional regulator;protein_id=MBO1928869.1;transl_table=11
JAGETS010000008.1	Genbank	pseudogene	79764	80384	.	+	.	ID=gene-J4731_05060;Name=J4731_05060;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_05060;pseudo=true
JAGETS010000008.1	Protein Homology	CDS	79764	80384	.	+	0	ID=cds-J4731_05060;Parent=gene-J4731_05060;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000864791.1;locus_tag=J4731_05060;product=ParA family protein;pseudo=true;transl_table=11
JAGETS010000008.1	Genbank	gene	80534	80719	.	+	.	ID=gene-J4731_05065;Name=J4731_05065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_05065
JAGETS010000008.1	Protein Homology	CDS	80534	80719	.	+	0	ID=cds-MBO1928870.1;Parent=gene-J4731_05065;Dbxref=NCBI_GP:MBO1928870.1;Name=MBO1928870.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001436758.1;locus_tag=J4731_05065;product=DNA partition complex ParG;protein_id=MBO1928870.1;transl_table=11
JAGETS010000008.1	Genbank	gene	80917	81180	.	-	.	ID=gene-J4731_05070;Name=J4731_05070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_05070
JAGETS010000008.1	GeneMarkS-2+	CDS	80917	81180	.	-	0	ID=cds-MBO1928871.1;Parent=gene-J4731_05070;Dbxref=NCBI_GP:MBO1928871.1;Name=MBO1928871.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_05070;product=hypothetical protein;protein_id=MBO1928871.1;transl_table=11
JAGETS010000008.1	Genbank	gene	82125	82358	.	-	.	ID=gene-J4731_05075;Name=J4731_05075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_05075
JAGETS010000008.1	GeneMarkS-2+	CDS	82125	82358	.	-	0	ID=cds-MBO1928872.1;Parent=gene-J4731_05075;Dbxref=NCBI_GP:MBO1928872.1;Name=MBO1928872.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_05075;product=hypothetical protein;protein_id=MBO1928872.1;transl_table=11
JAGETS010000008.1	Genbank	pseudogene	82510	82985	.	-	.	ID=gene-J4731_05080;Name=hcp;gbkey=Gene;gene=hcp;gene_biotype=pseudogene;locus_tag=J4731_05080;pseudo=true
JAGETS010000008.1	Protein Homology	CDS	82510	82985	.	-	0	ID=cds-J4731_05080;Parent=gene-J4731_05080;Note=frameshifted%3B internal stop;gbkey=CDS;gene=hcp;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010847044.1;locus_tag=J4731_05080;product=type VI secretion system tube protein Hcp;pseudo=true;transl_table=11
JAGETS010000008.1	Genbank	gene	83264	83596	.	-	.	ID=gene-J4731_05085;Name=J4731_05085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_05085
JAGETS010000008.1	GeneMarkS-2+	CDS	83264	83596	.	-	0	ID=cds-MBO1928873.1;Parent=gene-J4731_05085;Dbxref=NCBI_GP:MBO1928873.1;Name=MBO1928873.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_05085;product=hypothetical protein;protein_id=MBO1928873.1;transl_table=11
JAGETS010000008.1	Genbank	gene	83665	83811	.	-	.	ID=gene-J4731_05090;Name=J4731_05090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_05090
JAGETS010000008.1	GeneMarkS-2+	CDS	83665	83811	.	-	0	ID=cds-MBO1928874.1;Parent=gene-J4731_05090;Dbxref=NCBI_GP:MBO1928874.1;Name=MBO1928874.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_05090;product=hypothetical protein;protein_id=MBO1928874.1;transl_table=11
JAGETS010000008.1	Genbank	gene	84079	84423	.	-	.	ID=gene-J4731_05095;Name=J4731_05095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_05095
JAGETS010000008.1	Protein Homology	CDS	84079	84423	.	-	0	ID=cds-MBO1928875.1;Parent=gene-J4731_05095;Dbxref=NCBI_GP:MBO1928875.1;Name=MBO1928875.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR00621.2;locus_tag=J4731_05095;product=single-stranded DNA-binding protein;protein_id=MBO1928875.1;transl_table=11
JAGETS010000008.1	Genbank	gene	84426	84644	.	-	.	ID=gene-J4731_05100;Name=J4731_05100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_05100
JAGETS010000008.1	GeneMarkS-2+	CDS	84426	84644	.	-	0	ID=cds-MBO1928876.1;Parent=gene-J4731_05100;Dbxref=NCBI_GP:MBO1928876.1;Name=MBO1928876.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_05100;product=hypothetical protein;protein_id=MBO1928876.1;transl_table=11
JAGETS010000008.1	Genbank	gene	84819	85334	.	-	.	ID=gene-J4731_05105;Name=J4731_05105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_05105
JAGETS010000008.1	GeneMarkS-2+	CDS	84819	85334	.	-	0	ID=cds-MBO1928877.1;Parent=gene-J4731_05105;Dbxref=NCBI_GP:MBO1928877.1;Name=MBO1928877.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_05105;product=hypothetical protein;protein_id=MBO1928877.1;transl_table=11
JAGETS010000008.1	Genbank	pseudogene	85820	87076	.	-	.	ID=gene-J4731_05110;Name=umuC;gbkey=Gene;gene=umuC;gene_biotype=pseudogene;locus_tag=J4731_05110;pseudo=true
JAGETS010000008.1	Protein Homology	CDS	85820	87076	.	-	0	ID=cds-J4731_05110;Parent=gene-J4731_05110;Note=frameshifted;gbkey=CDS;gene=umuC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010245457.1;locus_tag=J4731_05110;product=translesion error-prone DNA polymerase V subunit UmuC;pseudo=true;transl_table=11
JAGETS010000008.1	Genbank	pseudogene	87076	87452	.	-	.	ID=gene-J4731_05115;Name=umuD;gbkey=Gene;gene=umuD;gene_biotype=pseudogene;locus_tag=J4731_05115;pseudo=true
JAGETS010000008.1	Protein Homology	CDS	87076	87452	.	-	0	ID=cds-J4731_05115;Parent=gene-J4731_05115;Note=frameshifted;gbkey=CDS;gene=umuD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008786793.1;locus_tag=J4731_05115;product=translesion error-prone DNA polymerase V autoproteolytic subunit;pseudo=true;transl_table=11
JAGETS010000008.1	Genbank	gene	87943	88545	.	-	.	ID=gene-J4731_05120;Name=J4731_05120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_05120
JAGETS010000008.1	GeneMarkS-2+	CDS	87943	88545	.	-	0	ID=cds-MBO1928878.1;Parent=gene-J4731_05120;Dbxref=NCBI_GP:MBO1928878.1;Name=MBO1928878.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_05120;product=hypothetical protein;protein_id=MBO1928878.1;transl_table=11
JAGETS010000008.1	Genbank	pseudogene	88859	91878	.	-	.	ID=gene-J4731_05125;Name=J4731_05125;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_05125;pseudo=true
JAGETS010000008.1	Protein Homology	CDS	88859	91878	.	-	0	ID=cds-J4731_05125;Parent=gene-J4731_05125;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010845770.1;locus_tag=J4731_05125;product=Tn3 family transposase;pseudo=true;transl_table=11
JAGETS010000008.1	Genbank	gene	92049	92678	.	+	.	ID=gene-J4731_05130;Name=J4731_05130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_05130
JAGETS010000008.1	Protein Homology	CDS	92049	92678	.	+	0	ID=cds-MBO1928879.1;Parent=gene-J4731_05130;Dbxref=NCBI_GP:MBO1928879.1;Name=MBO1928879.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006663553.1;locus_tag=J4731_05130;product=recombinase family protein;protein_id=MBO1928879.1;transl_table=11
JAGETS010000008.1	Genbank	gene	92975	93169	.	-	.	ID=gene-J4731_05135;Name=J4731_05135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_05135
JAGETS010000008.1	GeneMarkS-2+	CDS	92975	93169	.	-	0	ID=cds-MBO1928880.1;Parent=gene-J4731_05135;Dbxref=NCBI_GP:MBO1928880.1;Name=MBO1928880.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_05135;product=universal stress protein;protein_id=MBO1928880.1;transl_table=11
JAGETS010000008.1	Genbank	gene	93242	93547	.	-	.	ID=gene-J4731_05140;Name=J4731_05140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_05140
JAGETS010000008.1	GeneMarkS-2+	CDS	93242	93547	.	-	0	ID=cds-MBO1928881.1;Parent=gene-J4731_05140;Dbxref=NCBI_GP:MBO1928881.1;Name=MBO1928881.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_05140;product=hypothetical protein;protein_id=MBO1928881.1;transl_table=11
JAGETS010000008.1	Genbank	pseudogene	93773	95223	.	-	.	ID=gene-J4731_05145;Name=J4731_05145;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_05145;pseudo=true
JAGETS010000008.1	Protein Homology	CDS	93773	95223	.	-	0	ID=cds-J4731_05145;Parent=gene-J4731_05145;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008911199.1;locus_tag=J4731_05145;product=SulP family inorganic anion transporter;pseudo=true;transl_table=11
JAGETS010000008.1	Genbank	pseudogene	95519	95943	.	-	.	ID=gene-J4731_05150;Name=arsC;gbkey=Gene;gene=arsC;gene_biotype=pseudogene;locus_tag=J4731_05150;pseudo=true
JAGETS010000008.1	Protein Homology	CDS	95519	95943	.	-	0	ID=cds-J4731_05150;Parent=gene-J4731_05150;Note=frameshifted;gbkey=CDS;gene=arsC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000065794.1;locus_tag=J4731_05150;product=glutaredoxin-dependent arsenate reductase;pseudo=true;transl_table=11
JAGETS010000008.1	Genbank	pseudogene	95954	97237	.	-	.	ID=gene-J4731_05155;Name=J4731_05155;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_05155;pseudo=true
JAGETS010000008.1	Protein Homology	CDS	95954	97237	.	-	0	ID=cds-J4731_05155;Parent=gene-J4731_05155;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008911201.1;locus_tag=J4731_05155;product=arsenic transporter;pseudo=true;transl_table=11
JAGETS010000008.1	Genbank	pseudogene	97293	99036	.	-	.	ID=gene-J4731_05160;Name=arsA;gbkey=Gene;gene=arsA;gene_biotype=pseudogene;locus_tag=J4731_05160;pseudo=true
JAGETS010000008.1	Protein Homology	CDS	97293	99036	.	-	0	ID=cds-J4731_05160;Parent=gene-J4731_05160;Note=frameshifted;gbkey=CDS;gene=arsA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008911202.1;locus_tag=J4731_05160;product=arsenical pump-driving ATPase;pseudo=true;transl_table=11
JAGETS010000008.1	Genbank	pseudogene	99050	99414	.	-	.	ID=gene-J4731_05165;Name=arsD;gbkey=Gene;gene=arsD;gene_biotype=pseudogene;locus_tag=J4731_05165;pseudo=true
JAGETS010000008.1	Protein Homology	CDS	99050	99414	.	-	0	ID=cds-J4731_05165;Parent=gene-J4731_05165;Note=frameshifted;gbkey=CDS;gene=arsD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000855179.1;locus_tag=J4731_05165;product=arsenite efflux transporter metallochaperone ArsD;pseudo=true;transl_table=11
JAGETS010000008.1	Genbank	pseudogene	99462	99796	.	-	.	ID=gene-J4731_05170;Name=J4731_05170;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_05170;pseudo=true
JAGETS010000008.1	Protein Homology	CDS	99462	99796	.	-	0	ID=cds-J4731_05170;Parent=gene-J4731_05170;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012368267.1;locus_tag=J4731_05170;product=metalloregulator ArsR/SmtB family transcription factor;pseudo=true;transl_table=11
JAGETS010000008.1	Genbank	pseudogene	100049	103014	.	-	.	ID=gene-J4731_05175;Name=J4731_05175;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_05175;pseudo=true
JAGETS010000008.1	Protein Homology	CDS	100049	103014	.	-	0	ID=cds-J4731_05175;Parent=gene-J4731_05175;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001138064.1;locus_tag=J4731_05175;product=Tn3 family transposase;pseudo=true;transl_table=11
JAGETS010000008.1	Genbank	pseudogene	103017	103573	.	-	.	ID=gene-J4731_05180;Name=J4731_05180;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_05180;pseudo=true
JAGETS010000008.1	Protein Homology	CDS	103017	103573	.	-	0	ID=cds-J4731_05180;Parent=gene-J4731_05180;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005220837.1;locus_tag=J4731_05180;product=recombinase family protein;pseudo=true;transl_table=11
JAGETS010000008.1	Genbank	pseudogene	103874	104883	.	-	.	ID=gene-J4731_05185;Name=intI1;gbkey=Gene;gene=intI1;gene_biotype=pseudogene;locus_tag=J4731_05185;pseudo=true
JAGETS010000008.1	Protein Homology	CDS	103874	104883	.	-	0	ID=cds-J4731_05185;Parent=gene-J4731_05185;Note=frameshifted;gbkey=CDS;gene=intI1;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005221021.1;locus_tag=J4731_05185;product=class 1 integron integrase IntI1;pseudo=true;transl_table=11
JAGETS010000008.1	Genbank	gene	104840	105010	.	+	.	ID=gene-J4731_05190;Name=J4731_05190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_05190
JAGETS010000008.1	GeneMarkS-2+	CDS	104840	105010	.	+	0	ID=cds-MBO1928882.1;Parent=gene-J4731_05190;Dbxref=NCBI_GP:MBO1928882.1;Name=MBO1928882.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_05190;product=hypothetical protein;protein_id=MBO1928882.1;transl_table=11
JAGETS010000008.1	Genbank	gene	105172	105726	.	+	.	ID=gene-J4731_05195;Name=J4731_05195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_05195
JAGETS010000008.1	Protein Homology	CDS	105172	105726	.	+	0	ID=cds-MBO1928883.1;Parent=gene-J4731_05195;Dbxref=NCBI_GP:MBO1928883.1;Name=MBO1928883.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003159191.1;locus_tag=J4731_05195;product=fluoroquinolone-acetylating aminoglycoside 6'-N-acetyltransferase AAC(6')-Ib-cr5;protein_id=MBO1928883.1;transl_table=11
JAGETS010000008.1	Genbank	pseudogene	105853	106678	.	+	.	ID=gene-J4731_05200;Name=blaOXA;gbkey=Gene;gene=blaOXA;gene_biotype=pseudogene;locus_tag=J4731_05200;pseudo=true
JAGETS010000008.1	Protein Homology	CDS	105853	106678	.	+	0	ID=cds-J4731_05200;Parent=gene-J4731_05200;Note=frameshifted;gbkey=CDS;gene=blaOXA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_032491311.1;locus_tag=J4731_05200;product=OXA-1 family class D beta-lactamase;pseudo=true;transl_table=11
JAGETS010000008.1	Genbank	pseudogene	106809	107439	.	+	.	ID=gene-J4731_05205;Name=catB;gbkey=Gene;gene=catB;gene_biotype=pseudogene;locus_tag=J4731_05205;pseudo=true
JAGETS010000008.1	Protein Homology	CDS	106809	107439	.	+	0	ID=cds-J4731_05205;Parent=gene-J4731_05205;Note=frameshifted;gbkey=CDS;gene=catB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002075262.1;locus_tag=J4731_05205;product=type B chloramphenicol O-acetyltransferase;pseudo=true;transl_table=11
JAGETS010000008.1	Genbank	gene	107537	107974	.	+	.	ID=gene-J4731_05210;Name=arr;gbkey=Gene;gene=arr;gene_biotype=protein_coding;locus_tag=J4731_05210
JAGETS010000008.1	Protein Homology	CDS	107537	107974	.	+	0	ID=cds-MBO1928884.1;Parent=gene-J4731_05210;Dbxref=NCBI_GP:MBO1928884.1;Name=MBO1928884.1;gbkey=CDS;gene=arr;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012695486.1;locus_tag=J4731_05210;product=NAD(+)--rifampin ADP-ribosyltransferase;protein_id=MBO1928884.1;transl_table=11
JAGETS010000008.1	Genbank	pseudogene	108193	108537	.	+	.	ID=gene-J4731_05215;Name=J4731_05215;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_05215;pseudo=true
JAGETS010000008.1	Protein Homology	CDS	108193	108537	.	+	0	ID=cds-J4731_05215;Parent=gene-J4731_05215;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000679427.1;locus_tag=J4731_05215;product=QacE family quaternary ammonium compound efflux SMR transporter;pseudo=true;transl_table=11
JAGETS010000008.1	Genbank	pseudogene	108531	109354	.	+	.	ID=gene-J4731_05220;Name=sul1;gbkey=Gene;gene=sul1;gene_biotype=pseudogene;locus_tag=J4731_05220;pseudo=true
JAGETS010000008.1	Protein Homology	CDS	108531	109354	.	+	0	ID=cds-J4731_05220;Parent=gene-J4731_05220;Note=frameshifted;gbkey=CDS;gene=sul1;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000259031.1;locus_tag=J4731_05220;product=sulfonamide-resistant dihydropteroate synthase Sul1;pseudo=true;transl_table=11
JAGETS010000008.1	Genbank	gene	109438	109605	.	+	.	ID=gene-J4731_05225;Name=J4731_05225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_05225
JAGETS010000008.1	GeneMarkS-2+	CDS	109438	109605	.	+	0	ID=cds-MBO1928885.1;Parent=gene-J4731_05225;Dbxref=NCBI_GP:MBO1928885.1;Name=MBO1928885.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_05225;product=hypothetical protein;protein_id=MBO1928885.1;transl_table=11
JAGETS010000008.1	Genbank	pseudogene	109764	111288	.	+	.	ID=gene-J4731_05230;Name=J4731_05230;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_05230;pseudo=true
JAGETS010000008.1	Protein Homology	CDS	109764	111288	.	+	0	ID=cds-J4731_05230;Parent=gene-J4731_05230;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000050481.1;locus_tag=J4731_05230;product=IS91 family transposase;pseudo=true;transl_table=11
JAGETS010000008.1	Genbank	pseudogene	111530	111857	.	+	.	ID=gene-J4731_05235;Name=J4731_05235;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_05235;pseudo=true
JAGETS010000008.1	Protein Homology	CDS	111530	111857	.	+	0	ID=cds-J4731_05235;Parent=gene-J4731_05235;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004201171.1;locus_tag=J4731_05235;product=divalent-cation tolerance protein CutA;pseudo=true;transl_table=11
JAGETS010000008.1	Genbank	pseudogene	111862	112892	.	+	.	ID=gene-J4731_05240;Name=J4731_05240;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_05240;pseudo=true
JAGETS010000008.1	Protein Homology	CDS	111862	112892	.	+	0	ID=cds-J4731_05240;Parent=gene-J4731_05240;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004201169.1;locus_tag=J4731_05240;product=protein-disulfide reductase DsbD N-terminal domain-containing protein;pseudo=true;transl_table=11
JAGETS010000008.1	Genbank	pseudogene	112903	113538	.	-	.	ID=gene-J4731_05245;Name=J4731_05245;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_05245;pseudo=true
JAGETS010000008.1	Protein Homology	CDS	112903	113538	.	-	0	ID=cds-J4731_05245;Parent=gene-J4731_05245;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004201168.1;locus_tag=J4731_05245;product=phosphoribosylanthranilate isomerase;pseudo=true;transl_table=11
JAGETS010000008.1	Genbank	pseudogene	113543	113883	.	-	.	ID=gene-J4731_05250;Name=ble;gbkey=Gene;gene=ble;gene_biotype=pseudogene;locus_tag=J4731_05250;pseudo=true
JAGETS010000008.1	Protein Homology	CDS	113543	113883	.	-	0	ID=cds-J4731_05250;Parent=gene-J4731_05250;Note=frameshifted;gbkey=CDS;gene=ble;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000131935.1;locus_tag=J4731_05250;product=bleomycin binding protein Ble-MBL;pseudo=true;transl_table=11
JAGETS010000008.1	Genbank	pseudogene	113910	114717	.	-	.	ID=gene-J4731_05255;Name=blaNDM;gbkey=Gene;gene=blaNDM;gene_biotype=pseudogene;locus_tag=J4731_05255;pseudo=true
JAGETS010000008.1	Protein Homology	CDS	113910	114717	.	-	0	ID=cds-J4731_05255;Parent=gene-J4731_05255;Note=frameshifted;gbkey=CDS;gene=blaNDM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_032492661.1;locus_tag=J4731_05255;product=NDM family subclass B1 metallo-beta-lactamase;pseudo=true;transl_table=11
JAGETS010000008.1	Genbank	pseudogene	114817	114999	.	-	.	ID=gene-J4731_05260;Name=J4731_05260;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_05260;pseudo=true
JAGETS010000008.1	Protein Homology	CDS	114817	114999	.	-	0	ID=cds-J4731_05260;Parent=gene-J4731_05260;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001988464.1;locus_tag=J4731_05260;product=IS30 family transposase;pseudo=true;transl_table=11
JAGETS010000008.1	Genbank	pseudogene	115052	116023	.	+	.	ID=gene-J4731_05265;Name=J4731_05265;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_05265;pseudo=true
JAGETS010000008.1	Protein Homology	CDS	115052	116023	.	+	0	ID=cds-J4731_05265;Parent=gene-J4731_05265;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000019445.1;locus_tag=J4731_05265;product=IS5 family transposase;pseudo=true;transl_table=11
JAGETS010000008.1	Genbank	pseudogene	116167	117027	.	-	.	ID=gene-J4731_05270;Name=J4731_05270;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_05270;pseudo=true
JAGETS010000008.1	Protein Homology	CDS	116167	117027	.	-	0	ID=cds-J4731_05270;Parent=gene-J4731_05270;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611608.1;locus_tag=J4731_05270;product=IS30 family transposase;pseudo=true;transl_table=11
JAGETS010000008.1	Genbank	pseudogene	117804	119329	.	-	.	ID=gene-J4731_05275;Name=J4731_05275;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_05275;pseudo=true
JAGETS010000008.1	Protein Homology	CDS	117804	119329	.	-	0	ID=cds-J4731_05275;Parent=gene-J4731_05275;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019726358.1;locus_tag=J4731_05275;product=transposase;pseudo=true;transl_table=11
JAGETS010000008.1	Genbank	pseudogene	119516	121124	.	-	.	ID=gene-J4731_05280;Name=groL;gbkey=Gene;gene=groL;gene_biotype=pseudogene;locus_tag=J4731_05280;pseudo=true
JAGETS010000008.1	Protein Homology	CDS	119516	121124	.	-	0	ID=cds-J4731_05280;Parent=gene-J4731_05280;Note=60 kDa chaperone family%3B promotes refolding of misfolded polypeptides especially under stressful conditions%3B forms two stacked rings of heptamers to form a barrel-shaped 14mer%3B ends can be capped by GroES%3B misfolded proteins enter the barrel where they are refolded when GroES binds%3B frameshifted;gbkey=CDS;gene=groL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007114919.1;locus_tag=J4731_05280;product=chaperonin GroEL;pseudo=true;transl_table=11
JAGETS010000008.1	Genbank	gene	121160	121843	.	+	.	ID=gene-J4731_05285;Name=J4731_05285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_05285
JAGETS010000008.1	Protein Homology	CDS	121160	121843	.	+	0	ID=cds-MBO1928886.1;Parent=gene-J4731_05285;Dbxref=NCBI_GP:MBO1928886.1;Name=MBO1928886.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_099156038.1;locus_tag=J4731_05285;product=IS6 family transposase;protein_id=MBO1928886.1;transl_table=11
JAGETS010000008.1	Genbank	gene	122005	122559	.	+	.	ID=gene-J4731_05290;Name=J4731_05290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_05290
JAGETS010000008.1	Protein Homology	CDS	122005	122559	.	+	0	ID=cds-MBO1928887.1;Parent=gene-J4731_05290;Dbxref=NCBI_GP:MBO1928887.1;Name=MBO1928887.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003159191.1;locus_tag=J4731_05290;product=fluoroquinolone-acetylating aminoglycoside 6'-N-acetyltransferase AAC(6')-Ib-cr5;protein_id=MBO1928887.1;transl_table=11
JAGETS010000008.1	Genbank	pseudogene	122689	123515	.	+	.	ID=gene-J4731_05295;Name=blaOXA;gbkey=Gene;gene=blaOXA;gene_biotype=pseudogene;locus_tag=J4731_05295;pseudo=true
JAGETS010000008.1	Protein Homology	CDS	122689	123515	.	+	0	ID=cds-J4731_05295;Parent=gene-J4731_05295;Note=frameshifted;gbkey=CDS;gene=blaOXA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_032491311.1;locus_tag=J4731_05295;product=OXA-1 family class D beta-lactamase;pseudo=true;transl_table=11
JAGETS010000008.1	Genbank	pseudogene	123645	124083	.	+	.	ID=gene-J4731_05300;Name=J4731_05300;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_05300;pseudo=true
JAGETS010000008.1	Protein Homology	CDS	123645	124083	.	+	0	ID=cds-J4731_05300;Parent=gene-J4731_05300;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002075262.1;locus_tag=J4731_05300;product=CatB-related O-acetyltransferase;pseudo=true;transl_table=11
JAGETS010000008.1	Genbank	gene	124136	124840	.	-	.	ID=gene-J4731_05305;Name=J4731_05305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_05305
JAGETS010000008.1	Protein Homology	CDS	124136	124840	.	-	0	ID=cds-MBO1928888.1;Parent=gene-J4731_05305;Dbxref=NCBI_GP:MBO1928888.1;Name=MBO1928888.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005221000.1;locus_tag=J4731_05305;product=IS6-like element IS26 family transposase;protein_id=MBO1928888.1;transl_table=11
JAGETS010000008.1	Genbank	pseudogene	124947	125804	.	+	.	ID=gene-J4731_05310;Name=aac(3)-IIe;gbkey=Gene;gene=aac(3)-IIe;gene_biotype=pseudogene;locus_tag=J4731_05310;pseudo=true
JAGETS010000008.1	Protein Homology	CDS	124947	125804	.	+	0	ID=cds-J4731_05310;Parent=gene-J4731_05310;Note=frameshifted;gbkey=CDS;gene=aac(3)-IIe;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000557454.1;locus_tag=J4731_05310;product=aminoglycoside N-acetyltransferase AAC(3)-IIe;pseudo=true;transl_table=11
JAGETS010000008.1	Genbank	pseudogene	125817	126355	.	+	.	ID=gene-J4731_05315;Name=J4731_05315;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_05315;pseudo=true
JAGETS010000008.1	Protein Homology	CDS	125817	126355	.	+	0	ID=cds-J4731_05315;Parent=gene-J4731_05315;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005221025.1;locus_tag=J4731_05315;product=AAA family ATPase;pseudo=true;transl_table=11
JAGETS010000008.1	Genbank	pseudogene	126447	127494	.	+	.	ID=gene-J4731_05320;Name=J4731_05320;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_05320;pseudo=true
JAGETS010000008.1	Protein Homology	CDS	126447	127494	.	+	0	ID=cds-J4731_05320;Parent=gene-J4731_05320;Note=programmed frameshift%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611153.1;locus_tag=J4731_05320;product=IS3 family transposase;pseudo=true;transl_table=11
JAGETS010000008.1	Genbank	gene	127568	128248	.	-	.	ID=gene-J4731_05325;Name=J4731_05325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_05325
JAGETS010000008.1	Protein Homology	CDS	127568	128248	.	-	0	ID=cds-MBO1928889.1;Parent=gene-J4731_05325;Dbxref=NCBI_GP:MBO1928889.1;Name=MBO1928889.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_099156038.1;locus_tag=J4731_05325;product=IS6 family transposase;protein_id=MBO1928889.1;transl_table=11
JAGETS010000008.1	Genbank	pseudogene	128312	130550	.	-	.	ID=gene-J4731_05330;Name=J4731_05330;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_05330;pseudo=true
JAGETS010000008.1	Protein Homology	CDS	128312	130550	.	-	0	ID=cds-J4731_05330;Parent=gene-J4731_05330;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_032495017.1;locus_tag=J4731_05330;product=Tn3 family transposase;pseudo=true;transl_table=11
JAGETS010000008.1	Genbank	pseudogene	130564	130894	.	+	.	ID=gene-J4731_05335;Name=J4731_05335;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_05335;pseudo=true
JAGETS010000008.1	Protein Homology	CDS	130564	130894	.	+	0	ID=cds-J4731_05335;Parent=gene-J4731_05335;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001393253.1;locus_tag=J4731_05335;product=WbuC family cupin fold metalloprotein;pseudo=true;transl_table=11
JAGETS010000008.1	Genbank	pseudogene	130941	131813	.	-	.	ID=gene-J4731_05340;Name=blaCTX-M;gbkey=Gene;gene=blaCTX-M;gene_biotype=pseudogene;locus_tag=J4731_05340;pseudo=true
JAGETS010000008.1	Protein Homology	CDS	130941	131813	.	-	0	ID=cds-J4731_05340;Parent=gene-J4731_05340;Note=frameshifted;gbkey=CDS;gene=blaCTX-M;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011091028.1;locus_tag=J4731_05340;product=CTX-M family class A extended-spectrum beta-lactamase;pseudo=true;transl_table=11
JAGETS010000008.1	Genbank	pseudogene	132068	133325	.	-	.	ID=gene-J4731_05345;Name=J4731_05345;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_05345;pseudo=true
JAGETS010000008.1	Protein Homology	CDS	132068	133325	.	-	0	ID=cds-J4731_05345;Parent=gene-J4731_05345;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_031587700.1;locus_tag=J4731_05345;product=IS1380 family transposase;pseudo=true;transl_table=11
JAGETS010000008.1	Genbank	gene	133506	133724	.	-	.	ID=gene-J4731_05350;Name=J4731_05350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_05350
JAGETS010000008.1	Protein Homology	CDS	133506	133724	.	-	0	ID=cds-MBO1928890.1;Parent=gene-J4731_05350;Dbxref=NCBI_GP:MBO1928890.1;Name=MBO1928890.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025079.1;locus_tag=J4731_05350;product=DUF4158 domain-containing protein;protein_id=MBO1928890.1;transl_table=11
JAGETS010000008.1	Genbank	pseudogene	133887	133991	.	+	.	ID=gene-J4731_05355;Name=J4731_05355;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_05355;pseudo=true
JAGETS010000008.1	Protein Homology	CDS	133887	133991	.	+	0	ID=cds-J4731_05355;Parent=gene-J4731_05355;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005221001.1;locus_tag=J4731_05355;product=recombinase family protein;pseudo=true;transl_table=11
JAGETS010000008.1	Genbank	pseudogene	134048	134750	.	+	.	ID=gene-J4731_05360;Name=J4731_05360;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_05360;pseudo=true
JAGETS010000008.1	Protein Homology	CDS	134048	134750	.	+	0	ID=cds-J4731_05360;Parent=gene-J4731_05360;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005221000.1;locus_tag=J4731_05360;product=IS6-like element IS26 family transposase;pseudo=true;transl_table=11
JAGETS010000008.1	Genbank	gene	134797	134955	.	+	.	ID=gene-J4731_05365;Name=J4731_05365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_05365
JAGETS010000008.1	GeneMarkS-2+	CDS	134797	134955	.	+	0	ID=cds-MBO1928891.1;Parent=gene-J4731_05365;Dbxref=NCBI_GP:MBO1928891.1;Name=MBO1928891.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_05365;product=hypothetical protein;protein_id=MBO1928891.1;transl_table=11
JAGETS010000008.1	Genbank	pseudogene	135372	136108	.	+	.	ID=gene-J4731_05370;Name=J4731_05370;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_05370;pseudo=true
JAGETS010000008.1	Protein Homology	CDS	135372	136108	.	+	0	ID=cds-J4731_05370;Parent=gene-J4731_05370;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001370723.1;locus_tag=J4731_05370;product=recombinase family protein;pseudo=true;transl_table=11
JAGETS010000008.1	Genbank	gene	136105	136329	.	+	.	ID=gene-J4731_05375;Name=J4731_05375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_05375
JAGETS010000008.1	Protein Homology	CDS	136105	136329	.	+	0	ID=cds-MBO1928892.1;Parent=gene-J4731_05375;Dbxref=NCBI_GP:MBO1928892.1;Name=MBO1928892.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000743213.1;locus_tag=J4731_05375;product=hypothetical protein;protein_id=MBO1928892.1;transl_table=11
JAGETS010000008.1	Genbank	pseudogene	136539	138028	.	+	.	ID=gene-J4731_05380;Name=J4731_05380;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_05380;pseudo=true
JAGETS010000008.1	Protein Homology	CDS	136539	138028	.	+	0	ID=cds-J4731_05380;Parent=gene-J4731_05380;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001120888.1;locus_tag=J4731_05380;product=IS91 family transposase;pseudo=true;transl_table=11
JAGETS010000008.1	Genbank	pseudogene	138497	139006	.	+	.	ID=gene-J4731_05385;Name=J4731_05385;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_05385;pseudo=true
JAGETS010000008.1	Protein Homology	CDS	138497	139006	.	+	0	ID=cds-J4731_05385;Parent=gene-J4731_05385;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001747810.1;locus_tag=J4731_05385;product=DUF3363 domain-containing protein;pseudo=true;transl_table=11
JAGETS010000008.1	Genbank	pseudogene	139158	140369	.	+	.	ID=gene-J4731_05390;Name=floR;gbkey=Gene;gene=floR;gene_biotype=pseudogene;locus_tag=J4731_05390;pseudo=true
JAGETS010000008.1	Protein Homology	CDS	139158	140369	.	+	0	ID=cds-J4731_05390;Parent=gene-J4731_05390;Note=frameshifted;gbkey=CDS;gene=floR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000214125.1;locus_tag=J4731_05390;product=chloramphenicol/florfenicol efflux MFS transporter FloR;pseudo=true;transl_table=11
JAGETS010000008.1	Genbank	pseudogene	140397	140701	.	+	.	ID=gene-J4731_05395;Name=J4731_05395;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_05395;pseudo=true
JAGETS010000008.1	Protein Homology	CDS	140397	140701	.	+	0	ID=cds-J4731_05395;Parent=gene-J4731_05395;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001255015.1;locus_tag=J4731_05395;product=LysR family transcriptional regulator;pseudo=true;transl_table=11
JAGETS010000008.1	Genbank	pseudogene	140813	141001	.	+	.	ID=gene-J4731_05400;Name=J4731_05400;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_05400;pseudo=true
JAGETS010000008.1	Protein Homology	CDS	140813	141001	.	+	0	ID=cds-J4731_05400;Parent=gene-J4731_05400;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001120888.1;locus_tag=J4731_05400;product=IS91 family transposase;pseudo=true;transl_table=11
JAGETS010000008.1	Genbank	pseudogene	140968	142163	.	-	.	ID=gene-J4731_05405;Name=tet(A);gbkey=Gene;gene=tet(A);gene_biotype=pseudogene;locus_tag=J4731_05405;pseudo=true
JAGETS010000008.1	Protein Homology	CDS	140968	142163	.	-	0	ID=cds-J4731_05405;Parent=gene-J4731_05405;Note=frameshifted;gbkey=CDS;gene=tet(A);inference=COORDINATES: similar to AA sequence:RefSeq:WP_000804063.1;locus_tag=J4731_05405;product=tetracycline efflux MFS transporter Tet(A);pseudo=true;transl_table=11
JAGETS010000008.1	Genbank	pseudogene	142269	142915	.	+	.	ID=gene-J4731_05410;Name=tetR(A);gbkey=Gene;gene=tetR(A);gene_biotype=pseudogene;locus_tag=J4731_05410;pseudo=true
JAGETS010000008.1	Protein Homology	CDS	142269	142915	.	+	0	ID=cds-J4731_05410;Parent=gene-J4731_05410;Note=frameshifted;gbkey=CDS;gene=tetR(A);inference=COORDINATES: similar to AA sequence:RefSeq:WP_000164043.1;locus_tag=J4731_05410;product=tetracycline resistance transcriptional repressor TetR(A);pseudo=true;transl_table=11
JAGETS010000008.1	Genbank	pseudogene	142947	143182	.	-	.	ID=gene-J4731_05415;Name=J4731_05415;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_05415;pseudo=true
JAGETS010000008.1	Protein Homology	CDS	142947	143182	.	-	0	ID=cds-J4731_05415;Parent=gene-J4731_05415;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000844627.1;locus_tag=J4731_05415;product=relaxase;pseudo=true;transl_table=11
JAGETS010000008.1	Genbank	pseudogene	143667	144684	.	-	.	ID=gene-J4731_05420;Name=J4731_05420;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_05420;pseudo=true
JAGETS010000008.1	Protein Homology	CDS	143667	144684	.	-	0	ID=cds-J4731_05420;Parent=gene-J4731_05420;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612074.1;locus_tag=J4731_05420;product=IS110 family transposase;pseudo=true;transl_table=11
JAGETS010000008.1	Genbank	gene	144838	145674	.	-	.	ID=gene-J4731_05425;Name=J4731_05425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_05425
JAGETS010000008.1	Protein Homology	CDS	144838	145674	.	-	0	ID=cds-MBO1928893.1;Parent=gene-J4731_05425;Dbxref=NCBI_GP:MBO1928893.1;Name=MBO1928893.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000480972.1;locus_tag=J4731_05425;product=APH(6)-I family aminoglycoside O-phosphotransferase;protein_id=MBO1928893.1;transl_table=11
JAGETS010000008.1	Genbank	pseudogene	145674	146473	.	-	.	ID=gene-J4731_05430;Name=aph(3'')-Ib;gbkey=Gene;gene=aph(3'')-Ib;gene_biotype=pseudogene;locus_tag=J4731_05430;pseudo=true
JAGETS010000008.1	Protein Homology	CDS	145674	146473	.	-	0	ID=cds-J4731_05430;Parent=gene-J4731_05430;Note=frameshifted;gbkey=CDS;gene=aph(3'')-Ib;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010890156.1;locus_tag=J4731_05430;product=aminoglycoside O-phosphotransferase APH(3'')-Ib;pseudo=true;transl_table=11
JAGETS010000008.1	Genbank	pseudogene	146534	147344	.	-	.	ID=gene-J4731_05435;Name=sul2;gbkey=Gene;gene=sul2;gene_biotype=pseudogene;locus_tag=J4731_05435;pseudo=true
JAGETS010000008.1	Protein Homology	CDS	146534	147344	.	-	0	ID=cds-J4731_05435;Parent=gene-J4731_05435;Note=frameshifted;gbkey=CDS;gene=sul2;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001043260.1;locus_tag=J4731_05435;product=sulfonamide-resistant dihydropteroate synthase Sul2;pseudo=true;transl_table=11
JAGETS010000008.1	Genbank	pseudogene	147647	147956	.	+	.	ID=gene-J4731_05440;Name=J4731_05440;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_05440;pseudo=true
JAGETS010000008.1	Protein Homology	CDS	147647	147956	.	+	0	ID=cds-J4731_05440;Parent=gene-J4731_05440;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005221037.1;locus_tag=J4731_05440;product=hypothetical protein;pseudo=true;transl_table=11
JAGETS010000008.1	Genbank	pseudogene	148128	148911	.	+	.	ID=gene-J4731_05445;Name=J4731_05445;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_05445;pseudo=true
JAGETS010000008.1	Protein Homology	CDS	148128	148911	.	+	0	ID=cds-J4731_05445;Parent=gene-J4731_05445;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005221039.1;locus_tag=J4731_05445;product=ParA family protein;pseudo=true;transl_table=11
JAGETS010000008.1	Genbank	pseudogene	148915	150094	.	+	.	ID=gene-J4731_05450;Name=J4731_05450;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_05450;pseudo=true
JAGETS010000008.1	Protein Homology	CDS	148915	150094	.	+	0	ID=cds-J4731_05450;Parent=gene-J4731_05450;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005221040.1;locus_tag=J4731_05450;product=ParB/RepB/Spo0J family partition protein;pseudo=true;transl_table=11
JAGETS010000008.1	Genbank	pseudogene	150143	150414	.	+	.	ID=gene-J4731_05455;Name=J4731_05455;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_05455;pseudo=true
JAGETS010000008.1	Protein Homology	CDS	150143	150414	.	+	0	ID=cds-J4731_05455;Parent=gene-J4731_05455;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005221041.1;locus_tag=J4731_05455;product=helix-turn-helix domain-containing protein;pseudo=true;transl_table=11
JAGETS010000008.1	Genbank	pseudogene	150466	151098	.	-	.	ID=gene-J4731_05460;Name=J4731_05460;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_05460;pseudo=true
JAGETS010000008.1	Protein Homology	CDS	150466	151098	.	-	0	ID=cds-J4731_05460;Parent=gene-J4731_05460;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005221042.1;locus_tag=J4731_05460;product=N-6 DNA methylase;pseudo=true;transl_table=11
JAGETS010000008.1	Genbank	gene	151190	151333	.	-	.	ID=gene-J4731_05465;Name=J4731_05465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_05465
JAGETS010000008.1	Protein Homology	CDS	151190	151333	.	-	0	ID=cds-MBO1928894.1;Parent=gene-J4731_05465;Dbxref=NCBI_GP:MBO1928894.1;Name=MBO1928894.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005221043.1;locus_tag=J4731_05465;product=hypothetical protein;protein_id=MBO1928894.1;transl_table=11
JAGETS010000008.1	Genbank	pseudogene	151650	152025	.	+	.	ID=gene-J4731_05470;Name=J4731_05470;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_05470;pseudo=true
JAGETS010000008.1	Protein Homology	CDS	151650	152025	.	+	0	ID=cds-J4731_05470;Parent=gene-J4731_05470;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005221044.1;locus_tag=J4731_05470;product=hypothetical protein;pseudo=true;transl_table=11
JAGETS010000008.1	Genbank	gene	152018	152296	.	+	.	ID=gene-J4731_05475;Name=J4731_05475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_05475
JAGETS010000008.1	Protein Homology	CDS	152018	152296	.	+	0	ID=cds-MBO1928895.1;Parent=gene-J4731_05475;Dbxref=NCBI_GP:MBO1928895.1;Name=MBO1928895.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000044824.1;locus_tag=J4731_05475;product=hypothetical protein;protein_id=MBO1928895.1;transl_table=11
JAGETS010000008.1	Genbank	pseudogene	152271	152944	.	+	.	ID=gene-J4731_05480;Name=J4731_05480;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_05480;pseudo=true
JAGETS010000008.1	Protein Homology	CDS	152271	152944	.	+	0	ID=cds-J4731_05480;Parent=gene-J4731_05480;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005221046.1;locus_tag=J4731_05480;product=thymidylate kinase;pseudo=true;transl_table=11
JAGETS010000008.1	Genbank	gene	153010	153441	.	+	.	ID=gene-J4731_05485;Name=J4731_05485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_05485
JAGETS010000008.1	Protein Homology	CDS	153010	153441	.	+	0	ID=cds-MBO1928896.1;Parent=gene-J4731_05485;Dbxref=NCBI_GP:MBO1928896.1;Name=MBO1928896.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005507681.1;locus_tag=J4731_05485;product=hypothetical protein;protein_id=MBO1928896.1;transl_table=11
JAGETS010000008.1	Genbank	gene	153447	153758	.	+	.	ID=gene-J4731_05490;Name=J4731_05490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_05490
JAGETS010000008.1	Protein Homology	CDS	153447	153758	.	+	0	ID=cds-MBO1928897.1;Parent=gene-J4731_05490;Dbxref=NCBI_GP:MBO1928897.1;Name=MBO1928897.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005221048.1;locus_tag=J4731_05490;product=hypothetical protein;protein_id=MBO1928897.1;transl_table=11
JAGETS010000008.1	Genbank	pseudogene	153767	154262	.	+	.	ID=gene-J4731_05495;Name=J4731_05495;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_05495;pseudo=true
JAGETS010000008.1	Protein Homology	CDS	153767	154262	.	+	0	ID=cds-J4731_05495;Parent=gene-J4731_05495;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000647188.1;locus_tag=J4731_05495;product=hypothetical protein;pseudo=true;transl_table=11
JAGETS010000008.1	Genbank	pseudogene	154266	155668	.	+	.	ID=gene-J4731_05500;Name=J4731_05500;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_05500;pseudo=true
JAGETS010000008.1	Protein Homology	CDS	154266	155668	.	+	0	ID=cds-J4731_05500;Parent=gene-J4731_05500;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000936896.1;locus_tag=J4731_05500;product=DNA cytosine methyltransferase;pseudo=true;transl_table=11
JAGETS010000008.1	Genbank	pseudogene	155668	156322	.	+	.	ID=gene-J4731_05505;Name=J4731_05505;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_05505;pseudo=true
JAGETS010000008.1	Protein Homology	CDS	155668	156322	.	+	0	ID=cds-J4731_05505;Parent=gene-J4731_05505;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000268550.1;locus_tag=J4731_05505;product=hypothetical protein;pseudo=true;transl_table=11
JAGETS010000008.1	Genbank	gene	156527	156745	.	+	.	ID=gene-J4731_05510;Name=J4731_05510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_05510
JAGETS010000008.1	Protein Homology	CDS	156527	156745	.	+	0	ID=cds-MBO1928898.1;Parent=gene-J4731_05510;Dbxref=NCBI_GP:MBO1928898.1;Name=MBO1928898.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000362482.1;locus_tag=J4731_05510;product=hypothetical protein;protein_id=MBO1928898.1;transl_table=11
JAGETS010000008.1	Genbank	pseudogene	156838	157452	.	+	.	ID=gene-J4731_05515;Name=J4731_05515;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_05515;pseudo=true
JAGETS010000008.1	Protein Homology	CDS	156838	157452	.	+	0	ID=cds-J4731_05515;Parent=gene-J4731_05515;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000464631.1;locus_tag=J4731_05515;product=phage head-tail adapter protein;pseudo=true;transl_table=11
JAGETS010000008.1	Genbank	gene	157465	157626	.	+	.	ID=gene-J4731_05520;Name=J4731_05520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_05520
JAGETS010000008.1	GeneMarkS-2+	CDS	157465	157626	.	+	0	ID=cds-MBO1928899.1;Parent=gene-J4731_05520;Dbxref=NCBI_GP:MBO1928899.1;Name=MBO1928899.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_05520;product=hypothetical protein;protein_id=MBO1928899.1;transl_table=11
JAGETS010000008.1	Genbank	pseudogene	158050	158536	.	-	.	ID=gene-J4731_05525;Name=J4731_05525;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_05525;pseudo=true
JAGETS010000008.1	Protein Homology	CDS	158050	158536	.	-	0	ID=cds-J4731_05525;Parent=gene-J4731_05525;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000468105.1;locus_tag=J4731_05525;product=hypothetical protein;pseudo=true;transl_table=11
JAGETS010000008.1	Genbank	pseudogene	158551	160734	.	-	.	ID=gene-J4731_05530;Name=J4731_05530;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_05530;pseudo=true
JAGETS010000008.1	Protein Homology	CDS	158551	160734	.	-	0	ID=cds-J4731_05530;Parent=gene-J4731_05530;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000366822.1;locus_tag=J4731_05530;product=DNA topoisomerase 3;pseudo=true;transl_table=11
JAGETS010000008.1	Genbank	pseudogene	160947	161561	.	-	.	ID=gene-J4731_05535;Name=J4731_05535;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_05535;pseudo=true
JAGETS010000008.1	Protein Homology	CDS	160947	161561	.	-	0	ID=cds-J4731_05535;Parent=gene-J4731_05535;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013184413.1;locus_tag=J4731_05535;product=hypothetical protein;pseudo=true;transl_table=11
JAGETS010000008.1	Genbank	pseudogene	161726	164687	.	+	.	ID=gene-J4731_05540;Name=J4731_05540;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_05540;pseudo=true
JAGETS010000008.1	Protein Homology	CDS	161726	164687	.	+	0	ID=cds-J4731_05540;Parent=gene-J4731_05540;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001337757.1;locus_tag=J4731_05540;product=TraI domain-containing protein;pseudo=true;transl_table=11
JAGETS010000008.1	Genbank	pseudogene	164690	166525	.	+	.	ID=gene-J4731_05545;Name=traD;gbkey=Gene;gene=traD;gene_biotype=pseudogene;locus_tag=J4731_05545;pseudo=true
JAGETS010000008.1	Protein Homology	CDS	164690	166525	.	+	0	ID=cds-J4731_05545;Parent=gene-J4731_05545;Note=Members of this protein family are the putative conjugative coupling factor%2C TraD%2C as the term is used for the SXT and TOL plasmid systems.%3B frameshifted%3B internal stop;gbkey=CDS;gene=traD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011899407.1;locus_tag=J4731_05545;product=conjugative transfer system coupling protein TraD;pseudo=true;transl_table=11
JAGETS010000008.1	Genbank	pseudogene	166544	167106	.	+	.	ID=gene-J4731_05550;Name=J4731_05550;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_05550;pseudo=true
JAGETS010000008.1	Protein Homology	CDS	166544	167106	.	+	0	ID=cds-J4731_05550;Parent=gene-J4731_05550;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000332868.1;locus_tag=J4731_05550;product=hypothetical protein;pseudo=true;transl_table=11
JAGETS010000008.1	Genbank	gene	167063	167692	.	+	.	ID=gene-J4731_05555;Name=J4731_05555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_05555
JAGETS010000008.1	Protein Homology	CDS	167063	167692	.	+	0	ID=cds-MBO1928900.1;Parent=gene-J4731_05555;Dbxref=NCBI_GP:MBO1928900.1;Name=MBO1928900.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000743450.1;locus_tag=J4731_05555;product=DUF4400 domain-containing protein;protein_id=MBO1928900.1;transl_table=11
JAGETS010000008.1	Genbank	gene	167740	167916	.	+	.	ID=gene-J4731_05560;Name=J4731_05560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_05560
JAGETS010000008.1	GeneMarkS-2+	CDS	167740	167916	.	+	0	ID=cds-MBO1928901.1;Parent=gene-J4731_05560;Dbxref=NCBI_GP:MBO1928901.1;Name=MBO1928901.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_05560;product=hypothetical protein;protein_id=MBO1928901.1;transl_table=11
JAGETS010000008.1	Genbank	gene	168156	168533	.	+	.	ID=gene-J4731_05565;Name=J4731_05565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_05565
JAGETS010000008.1	Protein Homology	CDS	168156	168533	.	+	0	ID=cds-MBO1928902.1;Parent=gene-J4731_05565;Dbxref=NCBI_GP:MBO1928902.1;Name=MBO1928902.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000869261.1;locus_tag=J4731_05565;product=hypothetical protein;protein_id=MBO1928902.1;transl_table=11
JAGETS010000008.1	Genbank	gene	168603	169193	.	+	.	ID=gene-J4731_05570;Name=J4731_05570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_05570
JAGETS010000008.1	Protein Homology	CDS	168603	169193	.	+	0	ID=cds-MBO1928903.1;Parent=gene-J4731_05570;Dbxref=NCBI_GP:MBO1928903.1;Name=MBO1928903.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001670917.1;locus_tag=J4731_05570;product=hypothetical protein;protein_id=MBO1928903.1;transl_table=11
JAGETS010000008.1	Genbank	pseudogene	169516	169891	.	+	.	ID=gene-J4731_05575;Name=J4731_05575;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_05575;pseudo=true
JAGETS010000008.1	Protein Homology	CDS	169516	169891	.	+	0	ID=cds-J4731_05575;Parent=gene-J4731_05575;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000509509.1;locus_tag=J4731_05575;product=hypothetical protein;pseudo=true;transl_table=11
JAGETS010000008.1	Genbank	pseudogene	170033	170309	.	+	.	ID=gene-J4731_05580;Name=traL;gbkey=Gene;gene=traL;gene_biotype=pseudogene;locus_tag=J4731_05580;pseudo=true
JAGETS010000008.1	Protein Homology	CDS	170033	170309	.	+	0	ID=cds-J4731_05580;Parent=gene-J4731_05580;Note=frameshifted;gbkey=CDS;gene=traL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000433889.1;locus_tag=J4731_05580;product=type IV conjugative transfer system protein TraL;pseudo=true;transl_table=11
JAGETS010000008.1	Genbank	pseudogene	170306	170930	.	+	.	ID=gene-J4731_05585;Name=J4731_05585;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_05585;pseudo=true
JAGETS010000008.1	Protein Homology	CDS	170306	170930	.	+	0	ID=cds-J4731_05585;Parent=gene-J4731_05585;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001049717.1;locus_tag=J4731_05585;product=pilus assembly protein;pseudo=true;transl_table=11
JAGETS010000008.1	Genbank	pseudogene	170914	171829	.	+	.	ID=gene-J4731_05590;Name=J4731_05590;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_05590;pseudo=true
JAGETS010000008.1	Protein Homology	CDS	170914	171829	.	+	0	ID=cds-J4731_05590;Parent=gene-J4731_05590;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000794249.1;locus_tag=J4731_05590;product=type-F conjugative transfer system secretin TraK;pseudo=true;transl_table=11
JAGETS010000008.1	Genbank	pseudogene	171829	173117	.	+	.	ID=gene-J4731_05595;Name=J4731_05595;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_05595;pseudo=true
JAGETS010000008.1	Protein Homology	CDS	171829	173117	.	+	0	ID=cds-J4731_05595;Parent=gene-J4731_05595;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000647304.1;locus_tag=J4731_05595;product=conjugal transfer protein TraB;pseudo=true;transl_table=11
JAGETS010000008.1	Genbank	pseudogene	173131	173708	.	+	.	ID=gene-J4731_05600;Name=traV;gbkey=Gene;gene=traV;gene_biotype=pseudogene;locus_tag=J4731_05600;pseudo=true
JAGETS010000008.1	Protein Homology	CDS	173131	173708	.	+	0	ID=cds-J4731_05600;Parent=gene-J4731_05600;Note=frameshifted;gbkey=CDS;gene=traV;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010845916.1;locus_tag=J4731_05600;product=type IV conjugative transfer system lipoprotein TraV;pseudo=true;transl_table=11
JAGETS010000008.1	Genbank	pseudogene	173712	174127	.	+	.	ID=gene-J4731_05605;Name=J4731_05605;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_05605;pseudo=true
JAGETS010000008.1	Protein Homology	CDS	173712	174127	.	+	0	ID=cds-J4731_05605;Parent=gene-J4731_05605;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013141547.1;locus_tag=J4731_05605;product=conjugal transfer protein TraA;pseudo=true;transl_table=11
JAGETS010000008.1	Genbank	pseudogene	174294	179795	.	+	.	ID=gene-J4731_05610;Name=J4731_05610;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_05610;pseudo=true
JAGETS010000008.1	Protein Homology	CDS	174294	179795	.	+	0	ID=cds-J4731_05610;Parent=gene-J4731_05610;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000606833.1;locus_tag=J4731_05610;product=DUF4165 domain-containing protein;pseudo=true;transl_table=11
JAGETS010000008.1	Genbank	pseudogene	179940	180647	.	+	.	ID=gene-J4731_05615;Name=J4731_05615;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_05615;pseudo=true
JAGETS010000008.1	Protein Homology	CDS	179940	180647	.	+	0	ID=cds-J4731_05615;Parent=gene-J4731_05615;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001259344.1;locus_tag=J4731_05615;product=DsbC family protein;pseudo=true;transl_table=11
JAGETS010000008.1	Genbank	pseudogene	180644	183106	.	+	.	ID=gene-J4731_05620;Name=traC;gbkey=Gene;gene=traC;gene_biotype=pseudogene;locus_tag=J4731_05620;pseudo=true
JAGETS010000008.1	Protein Homology	CDS	180644	183106	.	+	0	ID=cds-J4731_05620;Parent=gene-J4731_05620;Note=frameshifted;gbkey=CDS;gene=traC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000637386.1;locus_tag=J4731_05620;product=type IV secretion system protein TraC;pseudo=true;transl_table=11
JAGETS010000008.1	Genbank	gene	183096	183413	.	+	.	ID=gene-J4731_05625;Name=J4731_05625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_05625
JAGETS010000008.1	Protein Homology	CDS	183096	183413	.	+	0	ID=cds-MBO1928904.1;Parent=gene-J4731_05625;Dbxref=NCBI_GP:MBO1928904.1;Name=MBO1928904.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013184404.1;locus_tag=J4731_05625;product=hypothetical protein;protein_id=MBO1928904.1;transl_table=11
JAGETS010000008.1	Genbank	pseudogene	183478	183933	.	+	.	ID=gene-J4731_05630;Name=J4731_05630;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_05630;pseudo=true
JAGETS010000008.1	Protein Homology	CDS	183478	183933	.	+	0	ID=cds-J4731_05630;Parent=gene-J4731_05630;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000672456.1;locus_tag=J4731_05630;product=S26 family signal peptidase;pseudo=true;transl_table=11
JAGETS010000008.1	Genbank	pseudogene	183896	185157	.	+	.	ID=gene-J4731_05635;Name=J4731_05635;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_05635;pseudo=true
JAGETS010000008.1	Protein Homology	CDS	183896	185157	.	+	0	ID=cds-J4731_05635;Parent=gene-J4731_05635;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001447719.1;locus_tag=J4731_05635;product=conjugal transfer protein TraW;pseudo=true;transl_table=11
JAGETS010000008.1	Genbank	pseudogene	185154	185820	.	+	.	ID=gene-J4731_05640;Name=J4731_05640;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_05640;pseudo=true
JAGETS010000008.1	Protein Homology	CDS	185154	185820	.	+	0	ID=cds-J4731_05640;Parent=gene-J4731_05640;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001337754.1;locus_tag=J4731_05640;product=EAL domain-containing protein;pseudo=true;transl_table=11
JAGETS010000008.1	Genbank	pseudogene	185828	186818	.	+	.	ID=gene-J4731_05645;Name=J4731_05645;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_05645;pseudo=true
JAGETS010000008.1	Protein Homology	CDS	185828	186818	.	+	0	ID=cds-J4731_05645;Parent=gene-J4731_05645;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000983283.1;locus_tag=J4731_05645;product=TraU family protein;pseudo=true;transl_table=11
JAGETS010000008.1	Genbank	pseudogene	186922	189717	.	+	.	ID=gene-J4731_05650;Name=traN;gbkey=Gene;gene=traN;gene_biotype=pseudogene;locus_tag=J4731_05650;pseudo=true
JAGETS010000008.1	Protein Homology	CDS	186922	189717	.	+	0	ID=cds-J4731_05650;Parent=gene-J4731_05650;Note=frameshifted%3B internal stop;gbkey=CDS;gene=traN;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001909286.1;locus_tag=J4731_05650;product=conjugal transfer mating pair stabilization protein TraN;pseudo=true;transl_table=11
JAGETS010000008.1	Genbank	pseudogene	189747	190603	.	-	.	ID=gene-J4731_05655;Name=J4731_05655;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_05655;pseudo=true
JAGETS010000008.1	Protein Homology	CDS	189747	190603	.	-	0	ID=cds-J4731_05655;Parent=gene-J4731_05655;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000709517.1;locus_tag=J4731_05655;product=hypothetical protein;pseudo=true;transl_table=11
JAGETS010000008.1	Genbank	pseudogene	190745	191358	.	-	.	ID=gene-J4731_05660;Name=J4731_05660;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_05660;pseudo=true
JAGETS010000008.1	Protein Homology	CDS	190745	191358	.	-	0	ID=cds-J4731_05660;Parent=gene-J4731_05660;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012368370.1;locus_tag=J4731_05660;product=hypothetical protein;pseudo=true;transl_table=11
JAGETS010000008.1	Genbank	pseudogene	191645	191963	.	+	.	ID=gene-J4731_05665;Name=J4731_05665;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_05665;pseudo=true
JAGETS010000008.1	Protein Homology	CDS	191645	191963	.	+	0	ID=cds-J4731_05665;Parent=gene-J4731_05665;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000547565.1;locus_tag=J4731_05665;product=hypothetical protein;pseudo=true;transl_table=11
JAGETS010000008.1	Genbank	gene	191890	192072	.	-	.	ID=gene-J4731_05670;Name=J4731_05670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_05670
JAGETS010000008.1	Protein Homology	CDS	191890	192072	.	-	0	ID=cds-MBO1928905.1;Parent=gene-J4731_05670;Dbxref=NCBI_GP:MBO1928905.1;Name=MBO1928905.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013141562.1;locus_tag=J4731_05670;product=hypothetical protein;protein_id=MBO1928905.1;transl_table=11
JAGETS010000008.1	Genbank	gene	192262	192447	.	+	.	ID=gene-J4731_05675;Name=J4731_05675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_05675
JAGETS010000008.1	Protein Homology	CDS	192262	192447	.	+	0	ID=cds-MBO1928906.1;Parent=gene-J4731_05675;Dbxref=NCBI_GP:MBO1928906.1;Name=MBO1928906.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001186917.1;locus_tag=J4731_05675;product=hypothetical protein;protein_id=MBO1928906.1;transl_table=11
JAGETS010000008.1	Genbank	pseudogene	192664	193630	.	+	.	ID=gene-J4731_05680;Name=J4731_05680;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_05680;pseudo=true
JAGETS010000008.1	Protein Homology	CDS	192664	193630	.	+	0	ID=cds-J4731_05680;Parent=gene-J4731_05680;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000085161.1;locus_tag=J4731_05680;product=CbbQ/NirQ/NorQ C-terminal domain-containing protein;pseudo=true;transl_table=11
JAGETS010000008.1	Genbank	pseudogene	193634	194537	.	+	.	ID=gene-J4731_05685;Name=J4731_05685;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_05685;pseudo=true
JAGETS010000008.1	Protein Homology	CDS	193634	194537	.	+	0	ID=cds-J4731_05685;Parent=gene-J4731_05685;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000739140.1;locus_tag=J4731_05685;product=hypothetical protein;pseudo=true;transl_table=11
JAGETS010000008.1	Genbank	pseudogene	194601	195128	.	+	.	ID=gene-J4731_05690;Name=ssb;gbkey=Gene;gene=ssb;gene_biotype=pseudogene;locus_tag=J4731_05690;pseudo=true
JAGETS010000008.1	Protein Homology	CDS	194601	195128	.	+	0	ID=cds-J4731_05690;Parent=gene-J4731_05690;Note=frameshifted;gbkey=CDS;gene=ssb;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000987165.1;locus_tag=J4731_05690;product=single-stranded DNA-binding protein;pseudo=true;transl_table=11
JAGETS010000008.1	Genbank	pseudogene	195222	196207	.	+	.	ID=gene-J4731_05695;Name=bet;gbkey=Gene;gene=bet;gene_biotype=pseudogene;locus_tag=J4731_05695;pseudo=true
JAGETS010000008.1	Protein Homology	CDS	195222	196207	.	+	0	ID=cds-J4731_05695;Parent=gene-J4731_05695;Note=frameshifted;gbkey=CDS;gene=bet;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001282585.1;locus_tag=J4731_05695;product=phage recombination protein Bet;pseudo=true;transl_table=11
JAGETS010000008.1	Genbank	pseudogene	196264	197271	.	+	.	ID=gene-J4731_05700;Name=J4731_05700;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_05700;pseudo=true
JAGETS010000008.1	Protein Homology	CDS	196264	197271	.	+	0	ID=cds-J4731_05700;Parent=gene-J4731_05700;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000706865.1;locus_tag=J4731_05700;product=YqaJ viral recombinase family protein;pseudo=true;transl_table=11
JAGETS010000008.1	Genbank	pseudogene	197467	198743	.	+	.	ID=gene-J4731_05705;Name=J4731_05705;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_05705;pseudo=true
JAGETS010000008.1	Protein Homology	CDS	197467	198743	.	+	0	ID=cds-J4731_05705;Parent=gene-J4731_05705;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000170086.1;locus_tag=J4731_05705;product=DUF3150 domain-containing protein;pseudo=true;transl_table=11
JAGETS010000008.1	Genbank	pseudogene	198781	200617	.	+	.	ID=gene-J4731_05710;Name=J4731_05710;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_05710;pseudo=true
JAGETS010000008.1	Protein Homology	CDS	198781	200617	.	+	0	ID=cds-J4731_05710;Parent=gene-J4731_05710;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000039317.1;locus_tag=J4731_05710;product=VWA domain-containing protein;pseudo=true;transl_table=11
JAGETS010000008.1	Genbank	pseudogene	200678	201021	.	+	.	ID=gene-J4731_05715;Name=J4731_05715;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_05715;pseudo=true
JAGETS010000008.1	Protein Homology	CDS	200678	201021	.	+	0	ID=cds-J4731_05715;Parent=gene-J4731_05715;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001447572.1;locus_tag=J4731_05715;product=hypothetical protein;pseudo=true;transl_table=11
JAGETS010000008.1	Genbank	pseudogene	201275	201812	.	+	.	ID=gene-J4731_05720;Name=J4731_05720;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_05720;pseudo=true
JAGETS010000008.1	Protein Homology	CDS	201275	201812	.	+	0	ID=cds-J4731_05720;Parent=gene-J4731_05720;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000018871.1;locus_tag=J4731_05720;product=hypothetical protein;pseudo=true;transl_table=11
JAGETS010000008.1	Genbank	pseudogene	201902	202401	.	+	.	ID=gene-J4731_05725;Name=J4731_05725;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_05725;pseudo=true
JAGETS010000008.1	Protein Homology	CDS	201902	202401	.	+	0	ID=cds-J4731_05725;Parent=gene-J4731_05725;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000793770.1;locus_tag=J4731_05725;product=hypothetical protein;pseudo=true;transl_table=11
JAGETS010000008.1	Genbank	pseudogene	202457	203353	.	+	.	ID=gene-J4731_05730;Name=J4731_05730;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_05730;pseudo=true
JAGETS010000008.1	Protein Homology	CDS	202457	203353	.	+	0	ID=cds-J4731_05730;Parent=gene-J4731_05730;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000969620.1;locus_tag=J4731_05730;product=DNA adenine modification methylase;pseudo=true;transl_table=11
JAGETS010000008.1	Genbank	pseudogene	203416	203639	.	+	.	ID=gene-J4731_05735;Name=J4731_05735;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_05735;pseudo=true
JAGETS010000008.1	Protein Homology	CDS	203416	203639	.	+	0	ID=cds-J4731_05735;Parent=gene-J4731_05735;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001102699.1;locus_tag=J4731_05735;product=2Fe-2S iron-sulfur cluster binding domain-containing protein;pseudo=true;transl_table=11
JAGETS010000008.1	Genbank	pseudogene	203700	204087	.	+	.	ID=gene-J4731_05740;Name=J4731_05740;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_05740;pseudo=true
JAGETS010000008.1	Protein Homology	CDS	203700	204087	.	+	0	ID=cds-J4731_05740;Parent=gene-J4731_05740;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013141572.1;locus_tag=J4731_05740;product=hypothetical protein;pseudo=true;transl_table=11
JAGETS010000008.1	Genbank	pseudogene	204077	204527	.	+	.	ID=gene-J4731_05745;Name=J4731_05745;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_05745;pseudo=true
JAGETS010000008.1	Protein Homology	CDS	204077	204527	.	+	0	ID=cds-J4731_05745;Parent=gene-J4731_05745;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001176699.1;locus_tag=J4731_05745;product=hypothetical protein;pseudo=true;transl_table=11
JAGETS010000008.1	Genbank	gene	204508	204828	.	+	.	ID=gene-J4731_05750;Name=J4731_05750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_05750
JAGETS010000008.1	Protein Homology	CDS	204508	204828	.	+	0	ID=cds-MBO1928907.1;Parent=gene-J4731_05750;Dbxref=NCBI_GP:MBO1928907.1;Name=MBO1928907.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000164429.1;locus_tag=J4731_05750;product=hypothetical protein;protein_id=MBO1928907.1;transl_table=11
JAGETS010000008.1	Genbank	gene	204864	205055	.	+	.	ID=gene-J4731_05755;Name=J4731_05755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_05755
JAGETS010000008.1	Protein Homology	CDS	204864	205055	.	+	0	ID=cds-MBO1928908.1;Parent=gene-J4731_05755;Dbxref=NCBI_GP:MBO1928908.1;Name=MBO1928908.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000651508.1;locus_tag=J4731_05755;product=hypothetical protein;protein_id=MBO1928908.1;transl_table=11
JAGETS010000008.1	Genbank	pseudogene	205121	205508	.	+	.	ID=gene-J4731_05760;Name=J4731_05760;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_05760;pseudo=true
JAGETS010000008.1	Protein Homology	CDS	205121	205508	.	+	0	ID=cds-J4731_05760;Parent=gene-J4731_05760;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000994741.1;locus_tag=J4731_05760;product=topoisomerase II;pseudo=true;transl_table=11
JAGETS010000008.1	Genbank	pseudogene	205658	205998	.	+	.	ID=gene-J4731_05765;Name=J4731_05765;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_05765;pseudo=true
JAGETS010000008.1	Protein Homology	CDS	205658	205998	.	+	0	ID=cds-J4731_05765;Parent=gene-J4731_05765;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000209075.1;locus_tag=J4731_05765;product=hypothetical protein;pseudo=true;transl_table=11
JAGETS010000008.1	Genbank	gene	206075	206377	.	+	.	ID=gene-J4731_05770;Name=J4731_05770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_05770
JAGETS010000008.1	Protein Homology	CDS	206075	206377	.	+	0	ID=cds-MBO1928909.1;Parent=gene-J4731_05770;Dbxref=NCBI_GP:MBO1928909.1;Name=MBO1928909.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000410925.1;locus_tag=J4731_05770;product=hypothetical protein;protein_id=MBO1928909.1;transl_table=11
JAGETS010000008.1	Genbank	pseudogene	206454	208070	.	+	.	ID=gene-J4731_05775;Name=J4731_05775;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_05775;pseudo=true
JAGETS010000008.1	Protein Homology	CDS	206454	208070	.	+	0	ID=cds-J4731_05775;Parent=gene-J4731_05775;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000201432.1;locus_tag=J4731_05775;product=DNA cytosine methyltransferase;pseudo=true;transl_table=11
JAGETS010000008.1	Genbank	gene	208128	208556	.	+	.	ID=gene-J4731_05780;Name=J4731_05780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_05780
JAGETS010000008.1	Protein Homology	CDS	208128	208556	.	+	0	ID=cds-MBO1928910.1;Parent=gene-J4731_05780;Dbxref=NCBI_GP:MBO1928910.1;Name=MBO1928910.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011899375.1;locus_tag=J4731_05780;product=hypothetical protein;protein_id=MBO1928910.1;transl_table=11
JAGETS010000008.1	Genbank	gene	208630	209184	.	+	.	ID=gene-J4731_05785;Name=J4731_05785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_05785
JAGETS010000008.1	Protein Homology	CDS	208630	209184	.	+	0	ID=cds-MBO1928911.1;Parent=gene-J4731_05785;Dbxref=NCBI_GP:MBO1928911.1;Name=MBO1928911.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001093867.1;locus_tag=J4731_05785;product=hypothetical protein;protein_id=MBO1928911.1;transl_table=11
JAGETS010000008.1	Genbank	pseudogene	209408	209790	.	+	.	ID=gene-J4731_05790;Name=J4731_05790;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_05790;pseudo=true
JAGETS010000008.1	Protein Homology	CDS	209408	209790	.	+	0	ID=cds-J4731_05790;Parent=gene-J4731_05790;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000042274.1;locus_tag=J4731_05790;product=hypothetical protein;pseudo=true;transl_table=11
JAGETS010000008.1	Genbank	pseudogene	209878	212318	.	+	.	ID=gene-J4731_05795;Name=J4731_05795;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_05795;pseudo=true
JAGETS010000008.1	Protein Homology	CDS	209878	212318	.	+	0	ID=cds-J4731_05795;Parent=gene-J4731_05795;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001187970.1;locus_tag=J4731_05795;product=phosphoadenosine phosphosulfate reductase;pseudo=true;transl_table=11
JAGETS010000008.1	Genbank	pseudogene	212515	212716	.	+	.	ID=gene-J4731_05800;Name=J4731_05800;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_05800;pseudo=true
JAGETS010000008.1	Protein Homology	CDS	212515	212716	.	+	0	ID=cds-J4731_05800;Parent=gene-J4731_05800;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000050847.1;locus_tag=J4731_05800;product=hypothetical protein;pseudo=true;transl_table=11
JAGETS010000008.1	Genbank	pseudogene	212788	213392	.	+	.	ID=gene-J4731_05805;Name=yfbR;gbkey=Gene;gene=yfbR;gene_biotype=pseudogene;locus_tag=J4731_05805;pseudo=true
JAGETS010000008.1	Protein Homology	CDS	212788	213392	.	+	0	ID=cds-J4731_05805;Parent=gene-J4731_05805;Note=frameshifted;gbkey=CDS;gene=yfbR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000071869.1;locus_tag=J4731_05805;product=5'-deoxynucleotidase;pseudo=true;transl_table=11
JAGETS010000008.1	Genbank	gene	213385	213654	.	+	.	ID=gene-J4731_05810;Name=J4731_05810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_05810
JAGETS010000008.1	Protein Homology	CDS	213385	213654	.	+	0	ID=cds-MBO1928912.1;Parent=gene-J4731_05810;Dbxref=NCBI_GP:MBO1928912.1;Name=MBO1928912.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000184110.1;locus_tag=J4731_05810;product=hypothetical protein;protein_id=MBO1928912.1;transl_table=11
JAGETS010000008.1	Genbank	pseudogene	213668	213885	.	+	.	ID=gene-J4731_05815;Name=J4731_05815;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_05815;pseudo=true
JAGETS010000008.1	Protein Homology	CDS	213668	213885	.	+	0	ID=cds-J4731_05815;Parent=gene-J4731_05815;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005221052.1;locus_tag=J4731_05815;product=hypothetical protein;pseudo=true;transl_table=11
JAGETS010000008.1	Genbank	pseudogene	213959	214515	.	+	.	ID=gene-J4731_05820;Name=J4731_05820;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_05820;pseudo=true
JAGETS010000008.1	Protein Homology	CDS	213959	214515	.	+	0	ID=cds-J4731_05820;Parent=gene-J4731_05820;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005221053.1;locus_tag=J4731_05820;product=pyruvate dehydrogenase;pseudo=true;transl_table=11
JAGETS010000008.1	Genbank	pseudogene	214589	215437	.	+	.	ID=gene-J4731_05825;Name=J4731_05825;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_05825;pseudo=true
JAGETS010000008.1	Protein Homology	CDS	214589	215437	.	+	0	ID=cds-J4731_05825;Parent=gene-J4731_05825;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005221054.1;locus_tag=J4731_05825;product=NgrC;pseudo=true;transl_table=11
JAGETS010000008.1	Genbank	gene	215640	215786	.	+	.	ID=gene-J4731_05830;Name=J4731_05830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_05830
JAGETS010000008.1	GeneMarkS-2+	CDS	215640	215786	.	+	0	ID=cds-MBO1928913.1;Parent=gene-J4731_05830;Dbxref=NCBI_GP:MBO1928913.1;Name=MBO1928913.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_05830;product=hypothetical protein;protein_id=MBO1928913.1;transl_table=11
JAGETS010000008.1	Genbank	pseudogene	215892	216276	.	+	.	ID=gene-J4731_05835;Name=J4731_05835;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_05835;pseudo=true
JAGETS010000008.1	Protein Homology	CDS	215892	216276	.	+	0	ID=cds-J4731_05835;Parent=gene-J4731_05835;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005221056.1;locus_tag=J4731_05835;product=hypothetical protein;pseudo=true;transl_table=11
JAGETS010000008.1	Genbank	pseudogene	216453	218177	.	+	.	ID=gene-J4731_05840;Name=J4731_05840;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_05840;pseudo=true
JAGETS010000008.1	Protein Homology	CDS	216453	218177	.	+	0	ID=cds-J4731_05840;Parent=gene-J4731_05840;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005221057.1;locus_tag=J4731_05840;product=toprim domain-containing protein;pseudo=true;transl_table=11
JAGETS010000008.1	Genbank	pseudogene	218164	218439	.	+	.	ID=gene-J4731_05845;Name=J4731_05845;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_05845;pseudo=true
JAGETS010000008.1	Protein Homology	CDS	218164	218439	.	+	0	ID=cds-J4731_05845;Parent=gene-J4731_05845;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005221058.1;locus_tag=J4731_05845;product=hypothetical protein;pseudo=true;transl_table=11
JAGETS010000008.1	Genbank	gene	218512	218751	.	+	.	ID=gene-J4731_05850;Name=J4731_05850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_05850
JAGETS010000008.1	Protein Homology	CDS	218512	218751	.	+	0	ID=cds-MBO1928914.1;Parent=gene-J4731_05850;Dbxref=NCBI_GP:MBO1928914.1;Name=MBO1928914.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005221059.1;locus_tag=J4731_05850;product=permease;protein_id=MBO1928914.1;transl_table=11
JAGETS010000008.1	Genbank	pseudogene	218761	218875	.	+	.	ID=gene-J4731_05855;Name=J4731_05855;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_05855;pseudo=true
JAGETS010000008.1	Protein Homology	CDS	218761	218875	.	+	0	ID=cds-J4731_05855;Parent=gene-J4731_05855;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005221060.1;locus_tag=J4731_05855;product=hypothetical protein;pseudo=true;transl_table=11
JAGETS010000008.1	Genbank	gene	218991	219365	.	+	.	ID=gene-J4731_05860;Name=J4731_05860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_05860
JAGETS010000008.1	Protein Homology	CDS	218991	219365	.	+	0	ID=cds-MBO1928915.1;Parent=gene-J4731_05860;Dbxref=NCBI_GP:MBO1928915.1;Name=MBO1928915.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005221061.1;locus_tag=J4731_05860;product=hypothetical protein;protein_id=MBO1928915.1;transl_table=11
JAGETS010000008.1	Genbank	pseudogene	219479	220200	.	+	.	ID=gene-J4731_05865;Name=J4731_05865;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_05865;pseudo=true
JAGETS010000008.1	Protein Homology	CDS	219479	220200	.	+	0	ID=cds-J4731_05865;Parent=gene-J4731_05865;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005221062.1;locus_tag=J4731_05865;product=hypothetical protein;pseudo=true;transl_table=11
JAGETS010000008.1	Genbank	gene	220255	220497	.	-	.	ID=gene-J4731_05870;Name=J4731_05870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_05870
JAGETS010000008.1	GeneMarkS-2+	CDS	220255	220497	.	-	0	ID=cds-MBO1928916.1;Parent=gene-J4731_05870;Dbxref=NCBI_GP:MBO1928916.1;Name=MBO1928916.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_05870;product=hypothetical protein;protein_id=MBO1928916.1;transl_table=11
JAGETS010000008.1	Genbank	pseudogene	220439	224286	.	+	.	ID=gene-J4731_05875;Name=J4731_05875;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_05875;pseudo=true
JAGETS010000008.1	Protein Homology	CDS	220439	224286	.	+	0	ID=cds-J4731_05875;Parent=gene-J4731_05875;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005221064.1;locus_tag=J4731_05875;product=RHS repeat protein;pseudo=true;transl_table=11
JAGETS010000008.1	Genbank	gene	224433	225449	.	-	.	ID=gene-J4731_05880;Name=J4731_05880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_05880
JAGETS010000008.1	Protein Homology	CDS	224433	225449	.	-	0	ID=cds-MBO1928917.1;Parent=gene-J4731_05880;Dbxref=NCBI_GP:MBO1928917.1;Name=MBO1928917.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414793.1;locus_tag=J4731_05880;product=IS5-like element IS5 family transposase;protein_id=MBO1928917.1;transl_table=11
JAGETS010000008.1	Genbank	pseudogene	225774	226045	.	+	.	ID=gene-J4731_05885;Name=J4731_05885;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_05885;pseudo=true
JAGETS010000008.1	Protein Homology	CDS	225774	226045	.	+	0	ID=cds-J4731_05885;Parent=gene-J4731_05885;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005221065.1;locus_tag=J4731_05885;product=MafI family immunity protein;pseudo=true;transl_table=11
JAGETS010000008.1	Genbank	pseudogene	226338	226619	.	+	.	ID=gene-J4731_05890;Name=J4731_05890;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_05890;pseudo=true
JAGETS010000008.1	Protein Homology	CDS	226338	226619	.	+	0	ID=cds-J4731_05890;Parent=gene-J4731_05890;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005221066.1;locus_tag=J4731_05890;product=hypothetical protein;pseudo=true;transl_table=11
JAGETS010000008.1	Genbank	pseudogene	226797	227248	.	+	.	ID=gene-J4731_05895;Name=J4731_05895;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_05895;pseudo=true
JAGETS010000008.1	Protein Homology	CDS	226797	227248	.	+	0	ID=cds-J4731_05895;Parent=gene-J4731_05895;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005221067.1;locus_tag=J4731_05895;product=hypothetical protein;pseudo=true;transl_table=11
JAGETS010000008.1	Genbank	pseudogene	227274	227859	.	-	.	ID=gene-J4731_05900;Name=J4731_05900;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_05900;pseudo=true
JAGETS010000008.1	Protein Homology	CDS	227274	227859	.	-	0	ID=cds-J4731_05900;Parent=gene-J4731_05900;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005221068.1;locus_tag=J4731_05900;product=hypothetical protein;pseudo=true;transl_table=11
JAGETS010000008.1	Genbank	pseudogene	228117	228397	.	+	.	ID=gene-J4731_05905;Name=J4731_05905;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_05905;pseudo=true
JAGETS010000008.1	Protein Homology	CDS	228117	228397	.	+	0	ID=cds-J4731_05905;Parent=gene-J4731_05905;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005221069.1;locus_tag=J4731_05905;product=hypothetical protein;pseudo=true;transl_table=11
JAGETS010000008.1	Genbank	gene	228416	228703	.	+	.	ID=gene-J4731_05910;Name=J4731_05910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_05910
JAGETS010000008.1	Protein Homology	CDS	228416	228703	.	+	0	ID=cds-MBO1928918.1;Parent=gene-J4731_05910;Dbxref=NCBI_GP:MBO1928918.1;Name=MBO1928918.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000932879.1;locus_tag=J4731_05910;product=hypothetical protein;protein_id=MBO1928918.1;transl_table=11
JAGETS010000008.1	Genbank	pseudogene	228718	229224	.	+	.	ID=gene-J4731_05915;Name=J4731_05915;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_05915;pseudo=true
JAGETS010000008.1	Protein Homology	CDS	228718	229224	.	+	0	ID=cds-J4731_05915;Parent=gene-J4731_05915;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001132404.1;locus_tag=J4731_05915;product=hypothetical protein;pseudo=true;transl_table=11
JAGETS010000008.1	Genbank	pseudogene	229227	230231	.	+	.	ID=gene-J4731_05920;Name=J4731_05920;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_05920;pseudo=true
JAGETS010000008.1	Protein Homology	CDS	229227	230231	.	+	0	ID=cds-J4731_05920;Parent=gene-J4731_05920;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005221071.1;locus_tag=J4731_05920;product=tyrosine-type recombinase/integrase;pseudo=true;transl_table=11
JAGETS010000008.1	Genbank	pseudogene	230236	231101	.	+	.	ID=gene-J4731_05925;Name=J4731_05925;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_05925;pseudo=true
JAGETS010000008.1	Protein Homology	CDS	230236	231101	.	+	0	ID=cds-J4731_05925;Parent=gene-J4731_05925;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005221072.1;locus_tag=J4731_05925;product=3'-5' exonuclease;pseudo=true;transl_table=11
JAGETS010000008.1	Genbank	gene	231098	231589	.	+	.	ID=gene-J4731_05930;Name=J4731_05930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_05930
JAGETS010000008.1	Protein Homology	CDS	231098	231589	.	+	0	ID=cds-MBO1928919.1;Parent=gene-J4731_05930;Dbxref=NCBI_GP:MBO1928919.1;Name=MBO1928919.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005221073.1;locus_tag=J4731_05930;product=hypothetical protein;protein_id=MBO1928919.1;transl_table=11
JAGETS010000008.1	Genbank	pseudogene	232033	232785	.	+	.	ID=gene-J4731_05935;Name=J4731_05935;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_05935;pseudo=true
JAGETS010000008.1	Protein Homology	CDS	232033	232785	.	+	0	ID=cds-J4731_05935;Parent=gene-J4731_05935;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000426813.1;locus_tag=J4731_05935;product=DNA replication terminus site-binding protein;pseudo=true;transl_table=11
JAGETS010000008.1	Genbank	pseudogene	232937	233972	.	+	.	ID=gene-J4731_05940;Name=J4731_05940;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_05940;pseudo=true
JAGETS010000008.1	Protein Homology	CDS	232937	233972	.	+	0	ID=cds-J4731_05940;Parent=gene-J4731_05940;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005221085.1;locus_tag=J4731_05940;product=DNA-binding protein;pseudo=true;transl_table=11
JAGETS010000008.1	Genbank	pseudogene	234258	235766	.	+	.	ID=gene-J4731_05945;Name=J4731_05945;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_05945;pseudo=true
JAGETS010000008.1	Protein Homology	CDS	234258	235766	.	+	0	ID=cds-J4731_05945;Parent=gene-J4731_05945;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005221086.1;locus_tag=J4731_05945;product=ATP-dependent helicase;pseudo=true;transl_table=11
JAGETS010000008.1	Genbank	pseudogene	235877	236913	.	+	.	ID=gene-J4731_05950;Name=traF;gbkey=Gene;gene=traF;gene_biotype=pseudogene;locus_tag=J4731_05950;pseudo=true
JAGETS010000008.1	Protein Homology	CDS	235877	236913	.	+	0	ID=cds-J4731_05950;Parent=gene-J4731_05950;Note=frameshifted;gbkey=CDS;gene=traF;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005221087.1;locus_tag=J4731_05950;product=conjugal transfer protein TraF;pseudo=true;transl_table=11
JAGETS010000008.1	Genbank	pseudogene	236915	238347	.	+	.	ID=gene-J4731_05955;Name=J4731_05955;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_05955;pseudo=true
JAGETS010000008.1	Protein Homology	CDS	236915	238347	.	+	0	ID=cds-J4731_05955;Parent=gene-J4731_05955;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005221088.1;locus_tag=J4731_05955;product=conjugal transfer protein TraH;pseudo=true;transl_table=11
JAGETS010000008.1	Genbank	pseudogene	238365	241951	.	+	.	ID=gene-J4731_05960;Name=J4731_05960;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_05960;pseudo=true
JAGETS010000008.1	Protein Homology	CDS	238365	241951	.	+	0	ID=cds-J4731_05960;Parent=gene-J4731_05960;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005221089.1;locus_tag=J4731_05960;product=conjugal transfer protein TraG N-terminal domain-containing protein;pseudo=true;transl_table=11
JAGETS010000008.1	Genbank	pseudogene	241987	242344	.	-	.	ID=gene-J4731_05965;Name=J4731_05965;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_05965;pseudo=true
JAGETS010000008.1	Protein Homology	CDS	241987	242344	.	-	0	ID=cds-J4731_05965;Parent=gene-J4731_05965;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005221090.1;locus_tag=J4731_05965;product=permease;pseudo=true;transl_table=11
JAGETS010000008.1	Genbank	gene	243050	243322	.	+	.	ID=gene-J4731_05970;Name=J4731_05970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_05970
JAGETS010000008.1	Protein Homology	CDS	243050	243322	.	+	0	ID=cds-MBO1928920.1;Parent=gene-J4731_05970;Dbxref=NCBI_GP:MBO1928920.1;Name=MBO1928920.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005221091.1;locus_tag=J4731_05970;product=helix-turn-helix domain-containing protein;protein_id=MBO1928920.1;transl_table=11
JAGETS010000008.1	Genbank	pseudogene	243322	243850	.	+	.	ID=gene-J4731_05975;Name=J4731_05975;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_05975;pseudo=true
JAGETS010000008.1	Protein Homology	CDS	243322	243850	.	+	0	ID=cds-J4731_05975;Parent=gene-J4731_05975;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005221092.1;locus_tag=J4731_05975;product=transglycosylase SLT domain-containing protein;pseudo=true;transl_table=11
JAGETS010000008.1	Genbank	pseudogene	243860	244466	.	+	.	ID=gene-J4731_05980;Name=J4731_05980;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_05980;pseudo=true
JAGETS010000008.1	Protein Homology	CDS	243860	244466	.	+	0	ID=cds-J4731_05980;Parent=gene-J4731_05980;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005221093.1;locus_tag=J4731_05980;product=transcriptional regulator;pseudo=true;transl_table=11
JAGETS010000008.1	Genbank	gene	244463	245014	.	+	.	ID=gene-J4731_05985;Name=J4731_05985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_05985
JAGETS010000008.1	Protein Homology	CDS	244463	245014	.	+	0	ID=cds-MBO1928921.1;Parent=gene-J4731_05985;Dbxref=NCBI_GP:MBO1928921.1;Name=MBO1928921.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005221094.1;locus_tag=J4731_05985;product=regulator;protein_id=MBO1928921.1;transl_table=11
JAGETS010000008.1	Genbank	gene	245072	245491	.	-	.	ID=gene-J4731_05990;Name=J4731_05990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_05990
JAGETS010000008.1	Protein Homology	CDS	245072	245491	.	-	0	ID=cds-MBO1928922.1;Parent=gene-J4731_05990;Dbxref=NCBI_GP:MBO1928922.1;Name=MBO1928922.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005221095.1;locus_tag=J4731_05990;product=H-NS histone family protein;protein_id=MBO1928922.1;transl_table=11
JAGETS010000008.1	Genbank	gene	245493	245786	.	-	.	ID=gene-J4731_05995;Name=J4731_05995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_05995
JAGETS010000008.1	Protein Homology	CDS	245493	245786	.	-	0	ID=cds-MBO1928923.1;Parent=gene-J4731_05995;Dbxref=NCBI_GP:MBO1928923.1;Name=MBO1928923.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005221096.1;locus_tag=J4731_05995;product=hypothetical protein;protein_id=MBO1928923.1;transl_table=11
JAGETS010000008.1	Genbank	pseudogene	245803	246783	.	-	.	ID=gene-J4731_06000;Name=J4731_06000;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_06000;pseudo=true
JAGETS010000008.1	Protein Homology	CDS	245803	246783	.	-	0	ID=cds-J4731_06000;Parent=gene-J4731_06000;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005221097.1;locus_tag=J4731_06000;product=ParM/StbA family protein;pseudo=true;transl_table=11
JAGETS010000008.1	Genbank	pseudogene	247282	247819	.	+	.	ID=gene-J4731_06005;Name=J4731_06005;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_06005;pseudo=true
JAGETS010000008.1	Protein Homology	CDS	247282	247819	.	+	0	ID=cds-J4731_06005;Parent=gene-J4731_06005;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005221098.1;locus_tag=J4731_06005;product=hypothetical protein;pseudo=true;transl_table=11
JAGETS010000008.1	Genbank	pseudogene	247824	248109	.	+	.	ID=gene-J4731_06010;Name=J4731_06010;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_06010;pseudo=true
JAGETS010000008.1	Protein Homology	CDS	247824	248109	.	+	0	ID=cds-J4731_06010;Parent=gene-J4731_06010;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005221099.1;locus_tag=J4731_06010;product=hypothetical protein;pseudo=true;transl_table=11
JAGETS010000008.1	Genbank	pseudogene	248094	249229	.	+	.	ID=gene-J4731_06015;Name=J4731_06015;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_06015;pseudo=true
JAGETS010000008.1	Protein Homology	CDS	248094	249229	.	+	0	ID=cds-J4731_06015;Parent=gene-J4731_06015;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005221100.1;locus_tag=J4731_06015;product=plasmid replication protein;pseudo=true;transl_table=11
JAGETS010000008.1	Genbank	gene	249967	250131	.	+	.	ID=gene-J4731_06020;Name=J4731_06020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_06020
JAGETS010000008.1	GeneMarkS-2+	CDS	249967	250131	.	+	0	ID=cds-MBO1928924.1;Parent=gene-J4731_06020;Dbxref=NCBI_GP:MBO1928924.1;Name=MBO1928924.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_06020;product=hypothetical protein;protein_id=MBO1928924.1;transl_table=11
JAGETS010000008.1	Genbank	gene	250158	250640	.	-	.	ID=gene-J4731_06025;Name=J4731_06025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_06025
JAGETS010000008.1	Protein Homology	CDS	250158	250640	.	-	0	ID=cds-MBO1928925.1;Parent=gene-J4731_06025;Dbxref=NCBI_GP:MBO1928925.1;Name=MBO1928925.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000883926.1;locus_tag=J4731_06025;product=hypothetical protein;protein_id=MBO1928925.1;transl_table=11
JAGETS010000008.1	Genbank	pseudogene	250665	251775	.	-	.	ID=gene-J4731_06030;Name=J4731_06030;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_06030;pseudo=true
JAGETS010000008.1	Protein Homology	CDS	250665	251775	.	-	0	ID=cds-J4731_06030;Parent=gene-J4731_06030;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005220951.1;locus_tag=J4731_06030;product=phosphoadenosine phosphosulfate reductase family protein;pseudo=true;transl_table=11
JAGETS010000008.1	Genbank	gene	252042	252650	.	+	.	ID=gene-J4731_06035;Name=J4731_06035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_06035
JAGETS010000008.1	Protein Homology	CDS	252042	252650	.	+	0	ID=cds-MBO1928926.1;Parent=gene-J4731_06035;Dbxref=NCBI_GP:MBO1928926.1;Name=MBO1928926.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005220953.1;locus_tag=J4731_06035;product=hypothetical protein;protein_id=MBO1928926.1;transl_table=11
JAGETS010000008.1	Genbank	gene	252655	253176	.	+	.	ID=gene-J4731_06040;Name=J4731_06040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_06040
JAGETS010000008.1	Protein Homology	CDS	252655	253176	.	+	0	ID=cds-MBO1928927.1;Parent=gene-J4731_06040;Dbxref=NCBI_GP:MBO1928927.1;Name=MBO1928927.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005220954.1;locus_tag=J4731_06040;product=hypothetical protein;protein_id=MBO1928927.1;transl_table=11
JAGETS010000008.1	Genbank	gene	253179	253700	.	+	.	ID=gene-J4731_06045;Name=J4731_06045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_06045
JAGETS010000008.1	Protein Homology	CDS	253179	253700	.	+	0	ID=cds-MBO1928928.1;Parent=gene-J4731_06045;Dbxref=NCBI_GP:MBO1928928.1;Name=MBO1928928.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005220955.1;locus_tag=J4731_06045;product=hypothetical protein;protein_id=MBO1928928.1;transl_table=11
JAGETS010000008.1	Genbank	pseudogene	253795	254267	.	+	.	ID=gene-J4731_06050;Name=J4731_06050;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_06050;pseudo=true
JAGETS010000008.1	Protein Homology	CDS	253795	254267	.	+	0	ID=cds-J4731_06050;Parent=gene-J4731_06050;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005220956.1;locus_tag=J4731_06050;product=hypothetical protein;pseudo=true;transl_table=11
JAGETS010000008.1	Genbank	pseudogene	254334	254569	.	+	.	ID=gene-J4731_06055;Name=J4731_06055;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_06055;pseudo=true
JAGETS010000008.1	Protein Homology	CDS	254334	254569	.	+	0	ID=cds-J4731_06055;Parent=gene-J4731_06055;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005220957.1;locus_tag=J4731_06055;product=hypothetical protein;pseudo=true;transl_table=11
JAGETS010000008.1	Genbank	pseudogene	254574	255422	.	+	.	ID=gene-J4731_06060;Name=J4731_06060;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_06060;pseudo=true
JAGETS010000008.1	Protein Homology	CDS	254574	255422	.	+	0	ID=cds-J4731_06060;Parent=gene-J4731_06060;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005220958.1;locus_tag=J4731_06060;product=hypothetical protein;pseudo=true;transl_table=11
JAGETS010000008.1	Genbank	pseudogene	255422	256374	.	+	.	ID=gene-J4731_06065;Name=J4731_06065;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_06065;pseudo=true
JAGETS010000008.1	Protein Homology	CDS	255422	256374	.	+	0	ID=cds-J4731_06065;Parent=gene-J4731_06065;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005220959.1;locus_tag=J4731_06065;product=S49 family peptidase;pseudo=true;transl_table=11
JAGETS010000008.1	Genbank	pseudogene	256390	257246	.	+	.	ID=gene-J4731_06070;Name=J4731_06070;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_06070;pseudo=true
JAGETS010000008.1	Protein Homology	CDS	256390	257246	.	+	0	ID=cds-J4731_06070;Parent=gene-J4731_06070;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005220960.1;locus_tag=J4731_06070;product=DsbA family protein;pseudo=true;transl_table=11
JAGETS010000008.1	Genbank	pseudogene	257280	257752	.	+	.	ID=gene-J4731_06075;Name=J4731_06075;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_06075;pseudo=true
JAGETS010000008.1	Protein Homology	CDS	257280	257752	.	+	0	ID=cds-J4731_06075;Parent=gene-J4731_06075;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005220961.1;locus_tag=J4731_06075;product=hypothetical protein;pseudo=true;transl_table=11
JAGETS010000008.1	Genbank	pseudogene	257762	258116	.	+	.	ID=gene-J4731_06080;Name=J4731_06080;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_06080;pseudo=true
JAGETS010000008.1	Protein Homology	CDS	257762	258116	.	+	0	ID=cds-J4731_06080;Parent=gene-J4731_06080;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005220962.1;locus_tag=J4731_06080;product=hypothetical protein;pseudo=true;transl_table=11
JAGETS010000008.1	Genbank	gene	258397	258561	.	+	.	ID=gene-J4731_06085;Name=J4731_06085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_06085
JAGETS010000008.1	GeneMarkS-2+	CDS	258397	258561	.	+	0	ID=cds-MBO1928929.1;Parent=gene-J4731_06085;Dbxref=NCBI_GP:MBO1928929.1;Name=MBO1928929.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_06085;product=hypothetical protein;protein_id=MBO1928929.1;transl_table=11
JAGETS010000008.1	Genbank	gene	258558	259076	.	+	.	ID=gene-J4731_06090;Name=J4731_06090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_06090
JAGETS010000008.1	Protein Homology	CDS	258558	259076	.	+	0	ID=cds-MBO1928930.1;Parent=gene-J4731_06090;Dbxref=NCBI_GP:MBO1928930.1;Name=MBO1928930.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005220964.1;locus_tag=J4731_06090;product=nitrite reductase;protein_id=MBO1928930.1;transl_table=11
JAGETS010000008.1	Genbank	gene	259076	259306	.	+	.	ID=gene-J4731_06095;Name=J4731_06095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_06095
JAGETS010000008.1	Protein Homology	CDS	259076	259306	.	+	0	ID=cds-MBO1928931.1;Parent=gene-J4731_06095;Dbxref=NCBI_GP:MBO1928931.1;Name=MBO1928931.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005220965.1;locus_tag=J4731_06095;product=hypothetical protein;protein_id=MBO1928931.1;transl_table=11
JAGETS010000008.1	Genbank	pseudogene	259293	260146	.	+	.	ID=gene-J4731_06100;Name=J4731_06100;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_06100;pseudo=true
JAGETS010000008.1	Protein Homology	CDS	259293	260146	.	+	0	ID=cds-J4731_06100;Parent=gene-J4731_06100;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005220966.1;locus_tag=J4731_06100;product=hypothetical protein;pseudo=true;transl_table=11
JAGETS010000008.1	Genbank	gene	260172	260423	.	+	.	ID=gene-J4731_06105;Name=J4731_06105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_06105
JAGETS010000008.1	GeneMarkS-2+	CDS	260172	260423	.	+	0	ID=cds-MBO1928932.1;Parent=gene-J4731_06105;Dbxref=NCBI_GP:MBO1928932.1;Name=MBO1928932.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_06105;product=hypothetical protein;protein_id=MBO1928932.1;transl_table=11
JAGETS010000008.1	Genbank	pseudogene	260426	260899	.	+	.	ID=gene-J4731_06110;Name=J4731_06110;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_06110;pseudo=true
JAGETS010000008.1	Protein Homology	CDS	260426	260899	.	+	0	ID=cds-J4731_06110;Parent=gene-J4731_06110;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001447556.1;locus_tag=J4731_06110;product=thermonuclease family protein;pseudo=true;transl_table=11
JAGETS010000008.1	Genbank	gene	260957	261211	.	+	.	ID=gene-J4731_06115;Name=J4731_06115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_06115
JAGETS010000008.1	Protein Homology	CDS	260957	261211	.	+	0	ID=cds-MBO1928933.1;Parent=gene-J4731_06115;Dbxref=NCBI_GP:MBO1928933.1;Name=MBO1928933.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005220969.1;locus_tag=J4731_06115;product=HU family DNA-binding protein;protein_id=MBO1928933.1;transl_table=11
JAGETS010000008.1	Genbank	pseudogene	261403	262857	.	+	.	ID=gene-J4731_06120;Name=J4731_06120;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_06120;pseudo=true
JAGETS010000008.1	Protein Homology	CDS	261403	262857	.	+	0	ID=cds-J4731_06120;Parent=gene-J4731_06120;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020196412.1;locus_tag=J4731_06120;product=site-specific integrase;pseudo=true;transl_table=11
JAGETS010000008.1	Genbank	pseudogene	262913	265502	.	+	.	ID=gene-J4731_06125;Name=J4731_06125;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_06125;pseudo=true
JAGETS010000008.1	Protein Homology	CDS	262913	265502	.	+	0	ID=cds-J4731_06125;Parent=gene-J4731_06125;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001567860.1;locus_tag=J4731_06125;product=integrase;pseudo=true;transl_table=11
JAGETS010000008.1	Genbank	pseudogene	265502	266163	.	+	.	ID=gene-J4731_06130;Name=J4731_06130;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_06130;pseudo=true
JAGETS010000008.1	Protein Homology	CDS	265502	266163	.	+	0	ID=cds-J4731_06130;Parent=gene-J4731_06130;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000353920.1;locus_tag=J4731_06130;product=hypothetical protein;pseudo=true;transl_table=11
JAGETS010000008.1	Genbank	pseudogene	266163	266599	.	+	.	ID=gene-J4731_06135;Name=J4731_06135;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_06135;pseudo=true
JAGETS010000008.1	Protein Homology	CDS	266163	266599	.	+	0	ID=cds-J4731_06135;Parent=gene-J4731_06135;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001273479.1;locus_tag=J4731_06135;product=hypothetical protein;pseudo=true;transl_table=11
JAGETS010000008.1	Genbank	gene	266801	267046	.	+	.	ID=gene-J4731_06140;Name=J4731_06140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_06140
JAGETS010000008.1	GeneMarkS-2+	CDS	266801	267046	.	+	0	ID=cds-MBO1928934.1;Parent=gene-J4731_06140;Dbxref=NCBI_GP:MBO1928934.1;Name=MBO1928934.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_06140;product=hypothetical protein;protein_id=MBO1928934.1;transl_table=11
JAGETS010000008.1	Genbank	gene	267115	267285	.	+	.	ID=gene-J4731_06145;Name=J4731_06145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_06145
JAGETS010000008.1	Protein Homology	CDS	267115	267285	.	+	0	ID=cds-MBO1928935.1;Parent=gene-J4731_06145;Dbxref=NCBI_GP:MBO1928935.1;Name=MBO1928935.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025843.1;locus_tag=J4731_06145;product=hypothetical protein;protein_id=MBO1928935.1;transl_table=11
JAGETS010000008.1	Genbank	gene	267260	267610	.	+	.	ID=gene-J4731_06150;Name=J4731_06150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_06150
JAGETS010000008.1	GeneMarkS-2+	CDS	267260	267610	.	+	0	ID=cds-MBO1928936.1;Parent=gene-J4731_06150;Dbxref=NCBI_GP:MBO1928936.1;Name=MBO1928936.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_06150;product=hypothetical protein;protein_id=MBO1928936.1;transl_table=11
JAGETS010000008.1	Genbank	gene	267631	268533	.	+	.	ID=gene-J4731_06155;Name=J4731_06155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_06155
JAGETS010000008.1	Protein Homology	CDS	267631	268533	.	+	0	ID=cds-MBO1928937.1;Parent=gene-J4731_06155;Dbxref=NCBI_GP:MBO1928937.1;Name=MBO1928937.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024991.1;locus_tag=J4731_06155;product=AAA family ATPase;protein_id=MBO1928937.1;transl_table=11
JAGETS010000008.1	Genbank	gene	268512	268751	.	+	.	ID=gene-J4731_06160;Name=J4731_06160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_06160
JAGETS010000008.1	Protein Homology	CDS	268512	268751	.	+	0	ID=cds-MBO1928938.1;Parent=gene-J4731_06160;Dbxref=NCBI_GP:MBO1928938.1;Name=MBO1928938.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024928.1;locus_tag=J4731_06160;product=ATP-binding domain-containing protein;protein_id=MBO1928938.1;transl_table=11
JAGETS010000008.1	Genbank	gene	268996	269418	.	-	.	ID=gene-J4731_06165;Name=J4731_06165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_06165
JAGETS010000008.1	GeneMarkS-2+	CDS	268996	269418	.	-	0	ID=cds-MBO1928939.1;Parent=gene-J4731_06165;Dbxref=NCBI_GP:MBO1928939.1;Name=MBO1928939.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_06165;product=hypothetical protein;protein_id=MBO1928939.1;transl_table=11
JAGETS010000008.1	Genbank	gene	269415	269645	.	-	.	ID=gene-J4731_06170;Name=J4731_06170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_06170
JAGETS010000008.1	Protein Homology	CDS	269415	269645	.	-	0	ID=cds-MBO1928940.1;Parent=gene-J4731_06170;Dbxref=NCBI_GP:MBO1928940.1;Name=MBO1928940.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012788.1;locus_tag=J4731_06170;product=hypothetical protein;protein_id=MBO1928940.1;transl_table=11
JAGETS010000008.1	Genbank	pseudogene	269630	269815	.	-	.	ID=gene-J4731_06175;Name=J4731_06175;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_06175;pseudo=true
JAGETS010000008.1	Protein Homology	CDS	269630	269815	.	-	0	ID=cds-J4731_06175;Parent=gene-J4731_06175;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012788.1;locus_tag=J4731_06175;product=tyrosine--tRNA ligase;pseudo=true;transl_table=11
JAGETS010000008.1	Genbank	gene	269776	270078	.	-	.	ID=gene-J4731_06180;Name=J4731_06180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_06180
JAGETS010000008.1	Protein Homology	CDS	269776	270078	.	-	0	ID=cds-MBO1928941.1;Parent=gene-J4731_06180;Dbxref=NCBI_GP:MBO1928941.1;Name=MBO1928941.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012788.1;locus_tag=J4731_06180;product=hypothetical protein;protein_id=MBO1928941.1;transl_table=11
##sequence-region JAGETS010000080.1 1 41256
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=587
JAGETS010000080.1	Genbank	region	1	41256	.	+	.	ID=JAGETS010000080.1:1..41256;Dbxref=taxon:587;collected-by=NHLS;collection-date=2018;country=South Africa: Pretoria;gbkey=Src;isolation-source=stool;lat-lon=25.7479 S 28.2293 E;mol_type=genomic DNA;nat-host=porcine;strain=SG003
JAGETS010000080.1	Genbank	pseudogene	1	491	.	-	.	ID=gene-J4731_21645;Name=J4731_21645;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_21645;pseudo=true
JAGETS010000080.1	Protein Homology	CDS	1	491	.	-	0	ID=cds-J4731_21645;Parent=gene-J4731_21645;Note=frameshifted%3B internal stop%3B incomplete%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004250334.1;locus_tag=J4731_21645;product=arginase family protein;pseudo=true;transl_table=11
JAGETS010000080.1	Genbank	pseudogene	752	2646	.	-	.	ID=gene-J4731_21650;Name=speA;gbkey=Gene;gene=speA;gene_biotype=pseudogene;locus_tag=J4731_21650;pseudo=true
JAGETS010000080.1	Protein Homology	CDS	752	2646	.	-	0	ID=cds-J4731_21650;Parent=gene-J4731_21650;Note=frameshifted%3B internal stop;gbkey=CDS;gene=speA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004244147.1;locus_tag=J4731_21650;product=biosynthetic arginine decarboxylase;pseudo=true;transl_table=11
JAGETS010000080.1	Genbank	pseudogene	3356	4498	.	+	.	ID=gene-J4731_21655;Name=metK;gbkey=Gene;gene=metK;gene_biotype=pseudogene;locus_tag=J4731_21655;pseudo=true
JAGETS010000080.1	Protein Homology	CDS	3356	4498	.	+	0	ID=cds-J4731_21655;Parent=gene-J4731_21655;Note=frameshifted;gbkey=CDS;gene=metK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123306.1;locus_tag=J4731_21655;product=methionine adenosyltransferase;pseudo=true;transl_table=11
JAGETS010000080.1	Genbank	pseudogene	4548	4971	.	-	.	ID=gene-J4731_21660;Name=J4731_21660;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_21660;pseudo=true
JAGETS010000080.1	Protein Homology	CDS	4548	4971	.	-	0	ID=cds-J4731_21660;Parent=gene-J4731_21660;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004922016.1;locus_tag=J4731_21660;product=YeeE/YedE family protein;pseudo=true;transl_table=11
JAGETS010000080.1	Genbank	pseudogene	5001	5367	.	-	.	ID=gene-J4731_21665;Name=J4731_21665;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_21665;pseudo=true
JAGETS010000080.1	Protein Homology	CDS	5001	5367	.	-	0	ID=cds-J4731_21665;Parent=gene-J4731_21665;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004876690.1;locus_tag=J4731_21665;product=YeeE/YedE family protein;pseudo=true;transl_table=11
JAGETS010000080.1	Genbank	pseudogene	5410	5733	.	-	.	ID=gene-J4731_21670;Name=J4731_21670;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_21670;pseudo=true
JAGETS010000080.1	Protein Homology	CDS	5410	5733	.	-	0	ID=cds-J4731_21670;Parent=gene-J4731_21670;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004262083.1;locus_tag=J4731_21670;product=helix-turn-helix transcriptional regulator;pseudo=true;transl_table=11
JAGETS010000080.1	Genbank	pseudogene	5881	6329	.	+	.	ID=gene-J4731_21675;Name=J4731_21675;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_21675;pseudo=true
JAGETS010000080.1	Protein Homology	CDS	5881	6329	.	+	0	ID=cds-J4731_21675;Parent=gene-J4731_21675;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015731302.1;locus_tag=J4731_21675;product=SprT family zinc-dependent metalloprotease;pseudo=true;transl_table=11
JAGETS010000080.1	Genbank	pseudogene	6401	7462	.	-	.	ID=gene-J4731_21680;Name=J4731_21680;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_21680;pseudo=true
JAGETS010000080.1	Protein Homology	CDS	6401	7462	.	-	0	ID=cds-J4731_21680;Parent=gene-J4731_21680;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004922030.1;locus_tag=J4731_21680;product=magnesium transporter;pseudo=true;transl_table=11
JAGETS010000080.1	Genbank	pseudogene	8278	8487	.	+	.	ID=gene-J4731_21685;Name=J4731_21685;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_21685;pseudo=true
JAGETS010000080.1	Protein Homology	CDS	8278	8487	.	+	0	ID=cds-J4731_21685;Parent=gene-J4731_21685;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004922032.1;locus_tag=J4731_21685;product=HEAT repeat domain-containing protein;pseudo=true;transl_table=11
JAGETS010000080.1	Genbank	pseudogene	8618	9584	.	-	.	ID=gene-J4731_21690;Name=hcr;gbkey=Gene;gene=hcr;gene_biotype=pseudogene;locus_tag=J4731_21690;pseudo=true
JAGETS010000080.1	Protein Homology	CDS	8618	9584	.	-	0	ID=cds-J4731_21690;Parent=gene-J4731_21690;Note=frameshifted;gbkey=CDS;gene=hcr;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002353988.1;locus_tag=J4731_21690;product=NADH oxidoreductase;pseudo=true;transl_table=11
JAGETS010000080.1	Genbank	pseudogene	9691	11339	.	-	.	ID=gene-J4731_21695;Name=hcp;gbkey=Gene;gene=hcp;gene_biotype=pseudogene;gene_synonym=priS;locus_tag=J4731_21695;pseudo=true
JAGETS010000080.1	Protein Homology	CDS	9691	11339	.	-	0	ID=cds-J4731_21695;Parent=gene-J4731_21695;Note=frameshifted;gbkey=CDS;gene=hcp;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011094205.1;locus_tag=J4731_21695;product=hydroxylamine reductase;pseudo=true;transl_table=11
JAGETS010000080.1	Genbank	pseudogene	11669	13009	.	+	.	ID=gene-J4731_21700;Name=clcA;gbkey=Gene;gene=clcA;gene_biotype=pseudogene;locus_tag=J4731_21700;pseudo=true
JAGETS010000080.1	Protein Homology	CDS	11669	13009	.	+	0	ID=cds-J4731_21700;Parent=gene-J4731_21700;Note=frameshifted%3B internal stop;gbkey=CDS;gene=clcA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006533806.1;locus_tag=J4731_21700;product=H(+)/Cl(-) exchange transporter ClcA;pseudo=true;transl_table=11
JAGETS010000080.1	Genbank	pseudogene	13107	14094	.	-	.	ID=gene-J4731_21705;Name=tehB;gbkey=Gene;gene=tehB;gene_biotype=pseudogene;locus_tag=J4731_21705;pseudo=true
JAGETS010000080.1	Protein Homology	CDS	13107	14094	.	-	0	ID=cds-J4731_21705;Parent=gene-J4731_21705;Note=frameshifted%3B internal stop;gbkey=CDS;gene=tehB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004922049.1;locus_tag=J4731_21705;product=SAM-dependent methyltransferase TehB;pseudo=true;transl_table=11
JAGETS010000080.1	Genbank	pseudogene	14209	15264	.	-	.	ID=gene-J4731_21710;Name=J4731_21710;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_21710;pseudo=true
JAGETS010000080.1	Protein Homology	CDS	14209	15264	.	-	0	ID=cds-J4731_21710;Parent=gene-J4731_21710;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004922053.1;locus_tag=J4731_21710;product=linear amide C-N hydrolase;pseudo=true;transl_table=11
JAGETS010000080.1	Genbank	pseudogene	15436	16167	.	-	.	ID=gene-J4731_21715;Name=J4731_21715;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_21715;pseudo=true
JAGETS010000080.1	Protein Homology	CDS	15436	16167	.	-	0	ID=cds-J4731_21715;Parent=gene-J4731_21715;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006660720.1;locus_tag=J4731_21715;product=topoisomerase IV;pseudo=true;transl_table=11
JAGETS010000080.1	Genbank	pseudogene	16512	17088	.	-	.	ID=gene-J4731_21720;Name=J4731_21720;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_21720;pseudo=true
JAGETS010000080.1	Protein Homology	CDS	16512	17088	.	-	0	ID=cds-J4731_21720;Parent=gene-J4731_21720;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012006312.1;locus_tag=J4731_21720;product=YceI family protein;pseudo=true;transl_table=11
JAGETS010000080.1	Genbank	pseudogene	17144	17657	.	-	.	ID=gene-J4731_21725;Name=J4731_21725;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_21725;pseudo=true
JAGETS010000080.1	Protein Homology	CDS	17144	17657	.	-	0	ID=cds-J4731_21725;Parent=gene-J4731_21725;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019455855.1;locus_tag=J4731_21725;product=cytochrome b;pseudo=true;transl_table=11
JAGETS010000080.1	Genbank	pseudogene	18037	18662	.	+	.	ID=gene-J4731_21730;Name=J4731_21730;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_21730;pseudo=true
JAGETS010000080.1	Protein Homology	CDS	18037	18662	.	+	0	ID=cds-J4731_21730;Parent=gene-J4731_21730;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014656435.1;locus_tag=J4731_21730;product=glutathione S-transferase family protein;pseudo=true;transl_table=11
JAGETS010000080.1	Genbank	pseudogene	18805	19424	.	-	.	ID=gene-J4731_21735;Name=J4731_21735;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_21735;pseudo=true
JAGETS010000080.1	Protein Homology	CDS	18805	19424	.	-	0	ID=cds-J4731_21735;Parent=gene-J4731_21735;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006660716.1;locus_tag=J4731_21735;product=malonate decarboxylase holo-ACP synthase;pseudo=true;transl_table=11
JAGETS010000080.1	Genbank	pseudogene	19634	20589	.	+	.	ID=gene-J4731_21740;Name=J4731_21740;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_21740;pseudo=true
JAGETS010000080.1	Protein Homology	CDS	19634	20589	.	+	0	ID=cds-J4731_21740;Parent=gene-J4731_21740;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004922072.1;locus_tag=J4731_21740;product=FUSC family protein;pseudo=true;transl_table=11
JAGETS010000080.1	Genbank	pseudogene	20726	21359	.	+	.	ID=gene-J4731_21745;Name=J4731_21745;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_21745;pseudo=true
JAGETS010000080.1	Protein Homology	CDS	20726	21359	.	+	0	ID=cds-J4731_21745;Parent=gene-J4731_21745;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006660712.1;locus_tag=J4731_21745;product=NAD(P)H-binding protein;pseudo=true;transl_table=11
JAGETS010000080.1	Genbank	pseudogene	21436	22256	.	-	.	ID=gene-J4731_21750;Name=iolB;gbkey=Gene;gene=iolB;gene_biotype=pseudogene;locus_tag=J4731_21750;pseudo=true
JAGETS010000080.1	Protein Homology	CDS	21436	22256	.	-	0	ID=cds-J4731_21750;Parent=gene-J4731_21750;Note=frameshifted;gbkey=CDS;gene=iolB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004922083.1;locus_tag=J4731_21750;product=5-deoxy-glucuronate isomerase;pseudo=true;transl_table=11
JAGETS010000080.1	Genbank	pseudogene	22401	23321	.	-	.	ID=gene-J4731_21755;Name=iolE;gbkey=Gene;gene=iolE;gene_biotype=pseudogene;locus_tag=J4731_21755;pseudo=true
JAGETS010000080.1	Protein Homology	CDS	22401	23321	.	-	0	ID=cds-J4731_21755;Parent=gene-J4731_21755;Note=frameshifted;gbkey=CDS;gene=iolE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010433880.1;locus_tag=J4731_21755;product=myo-inosose-2 dehydratase;pseudo=true;transl_table=11
JAGETS010000080.1	Genbank	pseudogene	23321	25220	.	-	.	ID=gene-J4731_21760;Name=iolC;gbkey=Gene;gene=iolC;gene_biotype=pseudogene;locus_tag=J4731_21760;pseudo=true
JAGETS010000080.1	Protein Homology	CDS	23321	25220	.	-	0	ID=cds-J4731_21760;Parent=gene-J4731_21760;Note=frameshifted%3B internal stop;gbkey=CDS;gene=iolC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011093047.1;locus_tag=J4731_21760;product=5-dehydro-2-deoxygluconokinase;pseudo=true;transl_table=11
JAGETS010000080.1	Genbank	pseudogene	25246	26371	.	-	.	ID=gene-J4731_21765;Name=J4731_21765;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_21765;pseudo=true
JAGETS010000080.1	Protein Homology	CDS	25246	26371	.	-	0	ID=cds-J4731_21765;Parent=gene-J4731_21765;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014656438.1;locus_tag=J4731_21765;product=Gfo/Idh/MocA family oxidoreductase;pseudo=true;transl_table=11
JAGETS010000080.1	Genbank	pseudogene	26686	27113	.	-	.	ID=gene-J4731_21770;Name=J4731_21770;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_21770;pseudo=true
JAGETS010000080.1	Protein Homology	CDS	26686	27113	.	-	0	ID=cds-J4731_21770;Parent=gene-J4731_21770;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005168621.1;locus_tag=J4731_21770;product=PTS sugar transporter subunit IIA;pseudo=true;transl_table=11
JAGETS010000080.1	Genbank	pseudogene	27167	28526	.	-	.	ID=gene-J4731_21775;Name=J4731_21775;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_21775;pseudo=true
JAGETS010000080.1	Protein Homology	CDS	27167	28526	.	-	0	ID=cds-J4731_21775;Parent=gene-J4731_21775;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005164562.1;locus_tag=J4731_21775;product=sugar porter family MFS transporter;pseudo=true;transl_table=11
JAGETS010000080.1	Genbank	pseudogene	28921	29852	.	-	.	ID=gene-J4731_21780;Name=J4731_21780;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_21780;pseudo=true
JAGETS010000080.1	Protein Homology	CDS	28921	29852	.	-	0	ID=cds-J4731_21780;Parent=gene-J4731_21780;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011093042.1;locus_tag=J4731_21780;product=inositol 2-dehydrogenase;pseudo=true;transl_table=11
JAGETS010000080.1	Genbank	pseudogene	30420	32325	.	-	.	ID=gene-J4731_21785;Name=iolD;gbkey=Gene;gene=iolD;gene_biotype=pseudogene;locus_tag=J4731_21785;pseudo=true
JAGETS010000080.1	Protein Homology	CDS	30420	32325	.	-	0	ID=cds-J4731_21785;Parent=gene-J4731_21785;Note=frameshifted%3B internal stop;gbkey=CDS;gene=iolD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001192846.1;locus_tag=J4731_21785;product=3D-(3%2C5/4)-trihydroxycyclohexane-1%2C2-dione acylhydrolase (decyclizing);pseudo=true;transl_table=11
JAGETS010000080.1	Genbank	pseudogene	32338	33840	.	-	.	ID=gene-J4731_21790;Name=J4731_21790;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_21790;pseudo=true
JAGETS010000080.1	Protein Homology	CDS	32338	33840	.	-	0	ID=cds-J4731_21790;Parent=gene-J4731_21790;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016943671.1;locus_tag=J4731_21790;product=CoA-acylating methylmalonate-semialdehyde dehydrogenase;pseudo=true;transl_table=11
JAGETS010000080.1	Genbank	pseudogene	34226	35056	.	+	.	ID=gene-J4731_21795;Name=J4731_21795;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_21795;pseudo=true
JAGETS010000080.1	Protein Homology	CDS	34226	35056	.	+	0	ID=cds-J4731_21795;Parent=gene-J4731_21795;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004922124.1;locus_tag=J4731_21795;product=MurR/RpiR family transcriptional regulator;pseudo=true;transl_table=11
JAGETS010000080.1	Genbank	gene	35461	35835	.	+	.	ID=gene-J4731_21800;Name=J4731_21800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_21800
JAGETS010000080.1	GeneMarkS-2+	CDS	35461	35835	.	+	0	ID=cds-MBO1929785.1;Parent=gene-J4731_21800;Dbxref=NCBI_GP:MBO1929785.1;Name=MBO1929785.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_21800;product=hypothetical protein;protein_id=MBO1929785.1;transl_table=11
JAGETS010000080.1	Genbank	gene	35902	36111	.	+	.	ID=gene-J4731_21805;Name=J4731_21805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_21805
JAGETS010000080.1	GeneMarkS-2+	CDS	35902	36111	.	+	0	ID=cds-MBO1929786.1;Parent=gene-J4731_21805;Dbxref=NCBI_GP:MBO1929786.1;Name=MBO1929786.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_21805;product=hypothetical protein;protein_id=MBO1929786.1;transl_table=11
JAGETS010000080.1	Genbank	pseudogene	36391	36641	.	-	.	ID=gene-J4731_21810;Name=J4731_21810;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_21810;pseudo=true
JAGETS010000080.1	Protein Homology	CDS	36391	36641	.	-	0	ID=cds-J4731_21810;Parent=gene-J4731_21810;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004922128.1;locus_tag=J4731_21810;product=helix-turn-helix transcriptional regulator;pseudo=true;transl_table=11
JAGETS010000080.1	Genbank	pseudogene	37528	38408	.	+	.	ID=gene-J4731_21815;Name=J4731_21815;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_21815;pseudo=true
JAGETS010000080.1	Protein Homology	CDS	37528	38408	.	+	0	ID=cds-J4731_21815;Parent=gene-J4731_21815;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004922140.1;locus_tag=J4731_21815;product=AraC family transcriptional regulator;pseudo=true;transl_table=11
JAGETS010000080.1	Genbank	pseudogene	38457	40466	.	-	.	ID=gene-J4731_21820;Name=J4731_21820;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_21820;pseudo=true
JAGETS010000080.1	Protein Homology	CDS	38457	40466	.	-	0	ID=cds-J4731_21820;Parent=gene-J4731_21820;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012988778.1;locus_tag=J4731_21820;product=TonB-dependent copper receptor;pseudo=true;transl_table=11
JAGETS010000080.1	Genbank	pseudogene	40647	41028	.	-	.	ID=gene-J4731_21825;Name=J4731_21825;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_21825;pseudo=true
JAGETS010000080.1	Protein Homology	CDS	40647	41028	.	-	0	ID=cds-J4731_21825;Parent=gene-J4731_21825;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004262172.1;locus_tag=J4731_21825;product=DUF2946 domain-containing protein;pseudo=true;transl_table=11
##sequence-region JAGETS010000081.1 1 29607
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=587
JAGETS010000081.1	Genbank	region	1	29607	.	+	.	ID=JAGETS010000081.1:1..29607;Dbxref=taxon:587;collected-by=NHLS;collection-date=2018;country=South Africa: Pretoria;gbkey=Src;isolation-source=stool;lat-lon=25.7479 S 28.2293 E;mol_type=genomic DNA;nat-host=porcine;strain=SG003
JAGETS010000081.1	Genbank	pseudogene	166	1139	.	+	.	ID=gene-J4731_21830;Name=pldB;gbkey=Gene;gene=pldB;gene_biotype=pseudogene;locus_tag=J4731_21830;pseudo=true
JAGETS010000081.1	Protein Homology	CDS	166	1139	.	+	0	ID=cds-J4731_21830;Parent=gene-J4731_21830;Note=frameshifted%3B internal stop;gbkey=CDS;gene=pldB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012666594.1;locus_tag=J4731_21830;product=lysophospholipase L2;pseudo=true;transl_table=11
JAGETS010000081.1	Genbank	pseudogene	1163	1971	.	+	.	ID=gene-J4731_21835;Name=yigL;gbkey=Gene;gene=yigL;gene_biotype=pseudogene;locus_tag=J4731_21835;pseudo=true
JAGETS010000081.1	Protein Homology	CDS	1163	1971	.	+	0	ID=cds-J4731_21835;Parent=gene-J4731_21835;Note=frameshifted%3B internal stop;gbkey=CDS;gene=yigL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006814577.1;locus_tag=J4731_21835;product=sugar/pyridoxal phosphate phosphatase YigL;pseudo=true;transl_table=11
JAGETS010000081.1	Genbank	pseudogene	2226	3026	.	+	.	ID=gene-J4731_21840;Name=J4731_21840;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_21840;pseudo=true
JAGETS010000081.1	Protein Homology	CDS	2226	3026	.	+	0	ID=cds-J4731_21840;Parent=gene-J4731_21840;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004906030.1;locus_tag=J4731_21840;product=sel1 repeat family protein;pseudo=true;transl_table=11
JAGETS010000081.1	Genbank	gene	3030	3368	.	-	.	ID=gene-J4731_21845;Name=J4731_21845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_21845
JAGETS010000081.1	Protein Homology	CDS	3030	3368	.	-	0	ID=cds-MBO1929787.1;Parent=gene-J4731_21845;Dbxref=NCBI_GP:MBO1929787.1;Name=MBO1929787.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004906029.1;locus_tag=J4731_21845;product=hypothetical protein;protein_id=MBO1929787.1;transl_table=11
JAGETS010000081.1	Genbank	pseudogene	3465	6621	.	-	.	ID=gene-J4731_21850;Name=mscM;gbkey=Gene;gene=mscM;gene_biotype=pseudogene;locus_tag=J4731_21850;pseudo=true
JAGETS010000081.1	Protein Homology	CDS	3465	6621	.	-	0	ID=cds-J4731_21850;Parent=gene-J4731_21850;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;gene=mscM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011906457.1;locus_tag=J4731_21850;product=miniconductance mechanosensitive channel MscM;pseudo=true;transl_table=11
JAGETS010000081.1	Genbank	pseudogene	6739	7627	.	-	.	ID=gene-J4731_21855;Name=psd;gbkey=Gene;gene=psd;gene_biotype=pseudogene;locus_tag=J4731_21855;pseudo=true
JAGETS010000081.1	Protein Homology	CDS	6739	7627	.	-	0	ID=cds-J4731_21855;Parent=gene-J4731_21855;Note=Phosphatidylserine decarboxylase is synthesized as a single chain precursor. Generation of the pyruvoyl active site from a Ser is coupled to cleavage of a Gly-Ser bond between the larger (beta) and smaller (alpha chains). It is an integral membrane protein.%3B frameshifted;gbkey=CDS;gene=psd;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004906026.1;locus_tag=J4731_21855;product=phosphatidylserine decarboxylase;pseudo=true;transl_table=11
JAGETS010000081.1	Genbank	pseudogene	7752	8823	.	-	.	ID=gene-J4731_21860;Name=rsgA;gbkey=Gene;gene=rsgA;gene_biotype=pseudogene;locus_tag=J4731_21860;pseudo=true
JAGETS010000081.1	Protein Homology	CDS	7752	8823	.	-	0	ID=cds-J4731_21860;Parent=gene-J4731_21860;Note=frameshifted;gbkey=CDS;gene=rsgA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246308.1;locus_tag=J4731_21860;product=small ribosomal subunit biogenesis GTPase RsgA;pseudo=true;transl_table=11
JAGETS010000081.1	Genbank	pseudogene	8934	9476	.	+	.	ID=gene-J4731_21865;Name=orn;gbkey=Gene;gene=orn;gene_biotype=pseudogene;locus_tag=J4731_21865;pseudo=true
JAGETS010000081.1	Protein Homology	CDS	8934	9476	.	+	0	ID=cds-J4731_21865;Parent=gene-J4731_21865;Note=frameshifted;gbkey=CDS;gene=orn;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006535770.1;locus_tag=J4731_21865;product=oligoribonuclease;pseudo=true;transl_table=11
JAGETS010000081.1	Genbank	gene	9776	9842	.	+	.	ID=gene-J4731_21870;Name=J4731_21870;gbkey=Gene;gene_biotype=tRNA;locus_tag=J4731_21870
JAGETS010000081.1	tRNAscan-SE	tRNA	9776	9842	.	+	.	ID=rna-J4731_21870;Parent=gene-J4731_21870;anticodon=(pos:9809..9811);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=J4731_21870;product=tRNA-Gly
JAGETS010000081.1	tRNAscan-SE	exon	9776	9842	.	+	.	ID=exon-J4731_21870-1;Parent=rna-J4731_21870;anticodon=(pos:9809..9811);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=J4731_21870;product=tRNA-Gly
JAGETS010000081.1	Genbank	gene	9880	9955	.	+	.	ID=gene-J4731_21875;Name=J4731_21875;gbkey=Gene;gene_biotype=tRNA;locus_tag=J4731_21875
JAGETS010000081.1	tRNAscan-SE	tRNA	9880	9955	.	+	.	ID=rna-J4731_21875;Parent=gene-J4731_21875;anticodon=(pos:9913..9915);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=J4731_21875;product=tRNA-Gly
JAGETS010000081.1	tRNAscan-SE	exon	9880	9955	.	+	.	ID=exon-J4731_21875-1;Parent=rna-J4731_21875;anticodon=(pos:9913..9915);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=J4731_21875;product=tRNA-Gly
JAGETS010000081.1	Genbank	gene	10020	10093	.	+	.	ID=gene-J4731_21880;Name=J4731_21880;gbkey=Gene;gene_biotype=tRNA;locus_tag=J4731_21880
JAGETS010000081.1	tRNAscan-SE	tRNA	10020	10093	.	+	.	ID=rna-J4731_21880;Parent=gene-J4731_21880;anticodon=(pos:10052..10054);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=J4731_21880;product=tRNA-Gly
JAGETS010000081.1	tRNAscan-SE	exon	10020	10093	.	+	.	ID=exon-J4731_21880-1;Parent=rna-J4731_21880;anticodon=(pos:10052..10054);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=J4731_21880;product=tRNA-Gly
JAGETS010000081.1	Genbank	pseudogene	10770	11929	.	-	.	ID=gene-J4731_21885;Name=queG;gbkey=Gene;gene=queG;gene_biotype=pseudogene;locus_tag=J4731_21885;pseudo=true
JAGETS010000081.1	Protein Homology	CDS	10770	11929	.	-	0	ID=cds-J4731_21885;Parent=gene-J4731_21885;Note=frameshifted%3B internal stop;gbkey=CDS;gene=queG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013649126.1;locus_tag=J4731_21885;product=tRNA epoxyqueuosine(34) reductase QueG;pseudo=true;transl_table=11
JAGETS010000081.1	Genbank	pseudogene	12215	12671	.	+	.	ID=gene-J4731_21890;Name=tsaE;gbkey=Gene;gene=tsaE;gene_biotype=pseudogene;locus_tag=J4731_21890;pseudo=true
JAGETS010000081.1	Protein Homology	CDS	12215	12671	.	+	0	ID=cds-J4731_21890;Parent=gene-J4731_21890;Note=frameshifted;gbkey=CDS;gene=tsaE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004915627.1;locus_tag=J4731_21890;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE;pseudo=true;transl_table=11
JAGETS010000081.1	Genbank	pseudogene	12748	13966	.	+	.	ID=gene-J4731_21895;Name=amiB;gbkey=Gene;gene=amiB;gene_biotype=pseudogene;locus_tag=J4731_21895;pseudo=true
JAGETS010000081.1	Protein Homology	CDS	12748	13966	.	+	0	ID=cds-J4731_21895;Parent=gene-J4731_21895;Note=frameshifted;gbkey=CDS;gene=amiB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004915628.1;locus_tag=J4731_21895;product=N-acetylmuramoyl-L-alanine amidase AmiB;pseudo=true;transl_table=11
JAGETS010000081.1	Genbank	pseudogene	13975	15278	.	+	.	ID=gene-J4731_21900;Name=mutL;gbkey=Gene;gene=mutL;gene_biotype=pseudogene;locus_tag=J4731_21900;pseudo=true
JAGETS010000081.1	Protein Homology	CDS	13975	15278	.	+	0	ID=cds-J4731_21900;Parent=gene-J4731_21900;Note=frameshifted;gbkey=CDS;gene=mutL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012442667.1;locus_tag=J4731_21900;product=DNA mismatch repair endonuclease MutL;pseudo=true;transl_table=11
JAGETS010000081.1	Genbank	gene	15351	15872	.	+	.	ID=gene-J4731_21905;Name=J4731_21905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_21905
JAGETS010000081.1	Protein Homology	CDS	15351	15872	.	+	0	ID=cds-MBO1929788.1;Parent=gene-J4731_21905;Dbxref=NCBI_GP:MBO1929788.1;Name=MBO1929788.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020260.1;locus_tag=J4731_21905;product=hypothetical protein;protein_id=MBO1929788.1;transl_table=11
JAGETS010000081.1	Genbank	pseudogene	15949	16841	.	+	.	ID=gene-J4731_21910;Name=miaA;gbkey=Gene;gene=miaA;gene_biotype=pseudogene;locus_tag=J4731_21910;pseudo=true
JAGETS010000081.1	Protein Homology	CDS	15949	16841	.	+	0	ID=cds-J4731_21910;Parent=gene-J4731_21910;Note=frameshifted;gbkey=CDS;gene=miaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418592.1;locus_tag=J4731_21910;product=tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA;pseudo=true;transl_table=11
JAGETS010000081.1	Genbank	pseudogene	16948	17240	.	+	.	ID=gene-J4731_21915;Name=hfq;gbkey=Gene;gene=hfq;gene_biotype=pseudogene;locus_tag=J4731_21915;pseudo=true
JAGETS010000081.1	Protein Homology	CDS	16948	17240	.	+	0	ID=cds-J4731_21915;Parent=gene-J4731_21915;Note=frameshifted;gbkey=CDS;gene=hfq;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006662385.1;locus_tag=J4731_21915;product=RNA chaperone Hfq;pseudo=true;transl_table=11
JAGETS010000081.1	Genbank	pseudogene	17332	18599	.	+	.	ID=gene-J4731_21920;Name=hflX;gbkey=Gene;gene=hflX;gene_biotype=pseudogene;locus_tag=J4731_21920;pseudo=true
JAGETS010000081.1	Protein Homology	CDS	17332	18599	.	+	0	ID=cds-J4731_21920;Parent=gene-J4731_21920;Note=frameshifted;gbkey=CDS;gene=hflX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002434123.1;locus_tag=J4731_21920;product=GTPase HflX;pseudo=true;transl_table=11
JAGETS010000081.1	Genbank	pseudogene	18730	19941	.	+	.	ID=gene-J4731_21925;Name=hflK;gbkey=Gene;gene=hflK;gene_biotype=pseudogene;locus_tag=J4731_21925;pseudo=true
JAGETS010000081.1	Protein Homology	CDS	18730	19941	.	+	0	ID=cds-J4731_21925;Parent=gene-J4731_21925;Note=frameshifted%3B internal stop;gbkey=CDS;gene=hflK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008912239.1;locus_tag=J4731_21925;product=FtsH protease activity modulator HflK;pseudo=true;transl_table=11
JAGETS010000081.1	Genbank	gene	19934	20935	.	+	.	ID=gene-J4731_21930;Name=hflC;gbkey=Gene;gene=hflC;gene_biotype=protein_coding;locus_tag=J4731_21930
JAGETS010000081.1	Protein Homology	CDS	19934	20935	.	+	0	ID=cds-MBO1929789.1;Parent=gene-J4731_21930;Dbxref=NCBI_GP:MBO1929789.1;Name=MBO1929789.1;gbkey=CDS;gene=hflC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246288.1;locus_tag=J4731_21930;product=protease modulator HflC;protein_id=MBO1929789.1;transl_table=11
JAGETS010000081.1	Genbank	pseudogene	21210	22507	.	+	.	ID=gene-J4731_21935;Name=J4731_21935;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_21935;pseudo=true
JAGETS010000081.1	Protein Homology	CDS	21210	22507	.	+	0	ID=cds-J4731_21935;Parent=gene-J4731_21935;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006657974.1;locus_tag=J4731_21935;product=adenylosuccinate synthase;pseudo=true;transl_table=11
JAGETS010000081.1	Genbank	pseudogene	22834	23251	.	+	.	ID=gene-J4731_21940;Name=nsrR;gbkey=Gene;gene=nsrR;gene_biotype=pseudogene;locus_tag=J4731_21940;pseudo=true
JAGETS010000081.1	Protein Homology	CDS	22834	23251	.	+	0	ID=cds-J4731_21940;Parent=gene-J4731_21940;Note=frameshifted;gbkey=CDS;gene=nsrR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313181.1;locus_tag=J4731_21940;product=nitric oxide-sensing transcriptional repressor NsrR;pseudo=true;transl_table=11
JAGETS010000081.1	Genbank	pseudogene	23294	25755	.	+	.	ID=gene-J4731_21945;Name=rnr;gbkey=Gene;gene=rnr;gene_biotype=pseudogene;locus_tag=J4731_21945;pseudo=true
JAGETS010000081.1	Protein Homology	CDS	23294	25755	.	+	0	ID=cds-J4731_21945;Parent=gene-J4731_21945;Note=frameshifted%3B internal stop;gbkey=CDS;gene=rnr;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006662387.1;locus_tag=J4731_21945;product=ribonuclease R;pseudo=true;transl_table=11
JAGETS010000081.1	Genbank	pseudogene	25830	26561	.	+	.	ID=gene-J4731_21950;Name=rlmB;gbkey=Gene;gene=rlmB;gene_biotype=pseudogene;locus_tag=J4731_21950;pseudo=true
JAGETS010000081.1	Protein Homology	CDS	25830	26561	.	+	0	ID=cds-J4731_21950;Parent=gene-J4731_21950;Note=frameshifted;gbkey=CDS;gene=rlmB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004905989.1;locus_tag=J4731_21950;product=23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB;pseudo=true;transl_table=11
JAGETS010000081.1	Genbank	pseudogene	26711	27105	.	+	.	ID=gene-J4731_21955;Name=rpsF;gbkey=Gene;gene=rpsF;gene_biotype=pseudogene;locus_tag=J4731_21955;pseudo=true
JAGETS010000081.1	Protein Homology	CDS	26711	27105	.	+	0	ID=cds-J4731_21955;Parent=gene-J4731_21955;Note=frameshifted;gbkey=CDS;gene=rpsF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463252.1;locus_tag=J4731_21955;product=30S ribosomal protein S6;pseudo=true;transl_table=11
JAGETS010000081.1	Genbank	pseudogene	27114	27430	.	+	.	ID=gene-J4731_21960;Name=priB;gbkey=Gene;gene=priB;gene_biotype=pseudogene;locus_tag=J4731_21960;pseudo=true
JAGETS010000081.1	Protein Homology	CDS	27114	27430	.	+	0	ID=cds-J4731_21960;Parent=gene-J4731_21960;Note=frameshifted;gbkey=CDS;gene=priB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246282.1;locus_tag=J4731_21960;product=primosomal replication protein N;pseudo=true;transl_table=11
JAGETS010000081.1	Genbank	pseudogene	27435	27679	.	+	.	ID=gene-J4731_21965;Name=rpsR;gbkey=Gene;gene=rpsR;gene_biotype=pseudogene;locus_tag=J4731_21965;pseudo=true
JAGETS010000081.1	Protein Homology	CDS	27435	27679	.	+	0	ID=cds-J4731_21965;Parent=gene-J4731_21965;Note=frameshifted%3B internal stop;gbkey=CDS;gene=rpsR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012986941.1;locus_tag=J4731_21965;product=30S ribosomal protein S18;pseudo=true;transl_table=11
JAGETS010000081.1	Genbank	pseudogene	27695	28140	.	+	.	ID=gene-J4731_21970;Name=rplI;gbkey=Gene;gene=rplI;gene_biotype=pseudogene;locus_tag=J4731_21970;pseudo=true
JAGETS010000081.1	Protein Homology	CDS	27695	28140	.	+	0	ID=cds-J4731_21970;Parent=gene-J4731_21970;Note=frameshifted;gbkey=CDS;gene=rplI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005134442.1;locus_tag=J4731_21970;product=50S ribosomal protein L9;pseudo=true;transl_table=11
JAGETS010000081.1	Genbank	gene	28495	28608	.	-	.	ID=gene-J4731_21975;Name=J4731_21975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_21975
JAGETS010000081.1	Protein Homology	CDS	28495	28608	.	-	0	ID=cds-MBO1929790.1;Parent=gene-J4731_21975;Dbxref=NCBI_GP:MBO1929790.1;Name=MBO1929790.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014650.1;locus_tag=J4731_21975;product=CDP-diacylglycerol diphosphatase;protein_id=MBO1929790.1;transl_table=11
JAGETS010000081.1	Genbank	gene	28593	28700	.	-	.	ID=gene-J4731_21980;Name=J4731_21980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_21980
JAGETS010000081.1	Protein Homology	CDS	28593	28700	.	-	0	ID=cds-MBO1929791.1;Parent=gene-J4731_21980;Dbxref=NCBI_GP:MBO1929791.1;Name=MBO1929791.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014650.1;locus_tag=J4731_21980;product=hypothetical protein;protein_id=MBO1929791.1;transl_table=11
JAGETS010000081.1	Genbank	pseudogene	29172	29368	.	-	.	ID=gene-J4731_21985;Name=J4731_21985;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_21985;pseudo=true
JAGETS010000081.1	Protein Homology	CDS	29172	29368	.	-	0	ID=cds-J4731_21985;Parent=gene-J4731_21985;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011815433.1;locus_tag=J4731_21985;product=cell envelope opacity-associated protein A;pseudo=true;transl_table=11
##sequence-region JAGETS010000082.1 1 46784
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=587
JAGETS010000082.1	Genbank	region	1	46784	.	+	.	ID=JAGETS010000082.1:1..46784;Dbxref=taxon:587;collected-by=NHLS;collection-date=2018;country=South Africa: Pretoria;gbkey=Src;isolation-source=stool;lat-lon=25.7479 S 28.2293 E;mol_type=genomic DNA;nat-host=porcine;strain=SG003
JAGETS010000082.1	Genbank	pseudogene	603	1536	.	+	.	ID=gene-J4731_21990;Name=aes;gbkey=Gene;gene=aes;gene_biotype=pseudogene;locus_tag=J4731_21990;pseudo=true
JAGETS010000082.1	Protein Homology	CDS	603	1536	.	+	0	ID=cds-J4731_21990;Parent=gene-J4731_21990;Note=frameshifted%3B internal stop;gbkey=CDS;gene=aes;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004255582.1;locus_tag=J4731_21990;product=acetyl esterase;pseudo=true;transl_table=11
JAGETS010000082.1	Genbank	pseudogene	1630	1841	.	-	.	ID=gene-J4731_21995;Name=cspA;gbkey=Gene;gene=cspA;gene_biotype=pseudogene;locus_tag=J4731_21995;pseudo=true
JAGETS010000082.1	Protein Homology	CDS	1630	1841	.	-	0	ID=cds-J4731_21995;Parent=gene-J4731_21995;Note=frameshifted;gbkey=CDS;gene=cspA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017132437.1;locus_tag=J4731_21995;product=RNA chaperone/antiterminator CspA;pseudo=true;transl_table=11
JAGETS010000082.1	Genbank	gene	2499	2648	.	-	.	ID=gene-J4731_22000;Name=J4731_22000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_22000
JAGETS010000082.1	GeneMarkS-2+	CDS	2499	2648	.	-	0	ID=cds-MBO1929792.1;Parent=gene-J4731_22000;Dbxref=NCBI_GP:MBO1929792.1;Name=MBO1929792.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_22000;product=hypothetical protein;protein_id=MBO1929792.1;transl_table=11
JAGETS010000082.1	Genbank	gene	2784	3095	.	-	.	ID=gene-J4731_22005;Name=fliE;gbkey=Gene;gene=fliE;gene_biotype=protein_coding;locus_tag=J4731_22005
JAGETS010000082.1	Protein Homology	CDS	2784	3095	.	-	0	ID=cds-MBO1929793.1;Parent=gene-J4731_22005;Dbxref=NCBI_GP:MBO1929793.1;Name=MBO1929793.1;gbkey=CDS;gene=fliE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006657532.1;locus_tag=J4731_22005;product=flagellar hook-basal body complex protein FliE;protein_id=MBO1929793.1;transl_table=11
JAGETS010000082.1	Genbank	pseudogene	3345	5015	.	+	.	ID=gene-J4731_22010;Name=fliF;gbkey=Gene;gene=fliF;gene_biotype=pseudogene;locus_tag=J4731_22010;pseudo=true
JAGETS010000082.1	Protein Homology	CDS	3345	5015	.	+	0	ID=cds-J4731_22010;Parent=gene-J4731_22010;Note=frameshifted;gbkey=CDS;gene=fliF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012368055.1;locus_tag=J4731_22010;product=flagellar M-ring protein FliF;pseudo=true;transl_table=11
JAGETS010000082.1	Genbank	pseudogene	5046	5991	.	+	.	ID=gene-J4731_22015;Name=fliG;gbkey=Gene;gene=fliG;gene_biotype=pseudogene;locus_tag=J4731_22015;pseudo=true
JAGETS010000082.1	Protein Homology	CDS	5046	5991	.	+	0	ID=cds-J4731_22015;Parent=gene-J4731_22015;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;gene=fliG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005189370.1;locus_tag=J4731_22015;product=flagellar motor switch protein FliG;pseudo=true;transl_table=11
JAGETS010000082.1	Genbank	pseudogene	6000	6701	.	+	.	ID=gene-J4731_22020;Name=fliH;gbkey=Gene;gene=fliH;gene_biotype=pseudogene;locus_tag=J4731_22020;pseudo=true
JAGETS010000082.1	Protein Homology	CDS	6000	6701	.	+	0	ID=cds-J4731_22020;Parent=gene-J4731_22020;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;gene=fliH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004255603.1;locus_tag=J4731_22020;product=flagellar assembly protein FliH;pseudo=true;transl_table=11
JAGETS010000082.1	Genbank	pseudogene	6925	8047	.	+	.	ID=gene-J4731_22025;Name=J4731_22025;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_22025;pseudo=true
JAGETS010000082.1	Protein Homology	CDS	6925	8047	.	+	0	ID=cds-J4731_22025;Parent=gene-J4731_22025;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005314284.1;locus_tag=J4731_22025;product=FliI/YscN family ATPase;pseudo=true;transl_table=11
JAGETS010000082.1	Genbank	pseudogene	8059	8501	.	+	.	ID=gene-J4731_22030;Name=fliJ;gbkey=Gene;gene=fliJ;gene_biotype=pseudogene;locus_tag=J4731_22030;pseudo=true
JAGETS010000082.1	Protein Homology	CDS	8059	8501	.	+	0	ID=cds-J4731_22030;Parent=gene-J4731_22030;Note=frameshifted;gbkey=CDS;gene=fliJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006657527.1;locus_tag=J4731_22030;product=flagella biosynthesis chaperone FliJ;pseudo=true;transl_table=11
JAGETS010000082.1	Genbank	pseudogene	8502	9865	.	+	.	ID=gene-J4731_22035;Name=J4731_22035;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_22035;pseudo=true
JAGETS010000082.1	Protein Homology	CDS	8502	9865	.	+	0	ID=cds-J4731_22035;Parent=gene-J4731_22035;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004255613.1;locus_tag=J4731_22035;product=flagellar hook-length control protein FliK;pseudo=true;transl_table=11
JAGETS010000082.1	Genbank	pseudogene	10025	10497	.	+	.	ID=gene-J4731_22040;Name=fliL;gbkey=Gene;gene=fliL;gene_biotype=pseudogene;locus_tag=J4731_22040;pseudo=true
JAGETS010000082.1	Protein Homology	CDS	10025	10497	.	+	0	ID=cds-J4731_22040;Parent=gene-J4731_22040;Note=frameshifted;gbkey=CDS;gene=fliL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006657525.1;locus_tag=J4731_22040;product=flagellar basal body-associated protein FliL;pseudo=true;transl_table=11
JAGETS010000082.1	Genbank	pseudogene	10503	11506	.	+	.	ID=gene-J4731_22045;Name=fliM;gbkey=Gene;gene=fliM;gene_biotype=pseudogene;locus_tag=J4731_22045;pseudo=true
JAGETS010000082.1	Protein Homology	CDS	10503	11506	.	+	0	ID=cds-J4731_22045;Parent=gene-J4731_22045;Note=frameshifted;gbkey=CDS;gene=fliM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004918669.1;locus_tag=J4731_22045;product=flagellar motor switch protein FliM;pseudo=true;transl_table=11
JAGETS010000082.1	Genbank	pseudogene	11623	11897	.	+	.	ID=gene-J4731_22050;Name=fliN;gbkey=Gene;gene=fliN;gene_biotype=pseudogene;locus_tag=J4731_22050;pseudo=true
JAGETS010000082.1	Protein Homology	CDS	11623	11897	.	+	0	ID=cds-J4731_22050;Parent=gene-J4731_22050;Note=frameshifted;gbkey=CDS;gene=fliN;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002386015.1;locus_tag=J4731_22050;product=flagellar motor switch protein FliN;pseudo=true;transl_table=11
JAGETS010000082.1	Genbank	gene	12100	12264	.	+	.	ID=gene-J4731_22055;Name=J4731_22055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_22055
JAGETS010000082.1	Protein Homology	CDS	12100	12264	.	+	0	ID=cds-MBO1929794.1;Parent=gene-J4731_22055;Dbxref=NCBI_GP:MBO1929794.1;Name=MBO1929794.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004243522.1;locus_tag=J4731_22055;product=flagellar biosynthetic protein FliO;protein_id=MBO1929794.1;transl_table=11
JAGETS010000082.1	Genbank	gene	12576	12752	.	+	.	ID=gene-J4731_22060;Name=J4731_22060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_22060
JAGETS010000082.1	Protein Homology	CDS	12576	12752	.	+	0	ID=cds-MBO1929795.1;Parent=gene-J4731_22060;Dbxref=NCBI_GP:MBO1929795.1;Name=MBO1929795.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013011.1;locus_tag=J4731_22060;product=hypothetical protein;protein_id=MBO1929795.1;transl_table=11
JAGETS010000082.1	Genbank	pseudogene	12826	13094	.	+	.	ID=gene-J4731_22065;Name=J4731_22065;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_22065;pseudo=true
JAGETS010000082.1	Protein Homology	CDS	12826	13094	.	+	0	ID=cds-J4731_22065;Parent=gene-J4731_22065;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000526016.1;locus_tag=J4731_22065;product=hypothetical protein;pseudo=true;transl_table=11
JAGETS010000082.1	Genbank	pseudogene	13121	13301	.	+	.	ID=gene-J4731_22070;Name=J4731_22070;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_22070;pseudo=true
JAGETS010000082.1	Protein Homology	CDS	13121	13301	.	+	0	ID=cds-J4731_22070;Parent=gene-J4731_22070;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011093293.1;locus_tag=J4731_22070;product=flagellar biosynthetic protein FliQ;pseudo=true;transl_table=11
JAGETS010000082.1	Genbank	pseudogene	13388	14148	.	+	.	ID=gene-J4731_22075;Name=fliR;gbkey=Gene;gene=fliR;gene_biotype=pseudogene;locus_tag=J4731_22075;pseudo=true
JAGETS010000082.1	Protein Homology	CDS	13388	14148	.	+	0	ID=cds-J4731_22075;Parent=gene-J4731_22075;Note=frameshifted%3B internal stop;gbkey=CDS;gene=fliR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006657519.1;locus_tag=J4731_22075;product=flagellar biosynthetic protein FliR;pseudo=true;transl_table=11
JAGETS010000082.1	Genbank	gene	14455	14667	.	-	.	ID=gene-J4731_22080;Name=J4731_22080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_22080
JAGETS010000082.1	GeneMarkS-2+	CDS	14455	14667	.	-	0	ID=cds-MBO1929796.1;Parent=gene-J4731_22080;Dbxref=NCBI_GP:MBO1929796.1;Name=MBO1929796.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_22080;product=ATP-binding cassette domain-containing protein;protein_id=MBO1929796.1;transl_table=11
JAGETS010000082.1	Genbank	gene	14703	15026	.	-	.	ID=gene-J4731_22085;Name=J4731_22085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_22085
JAGETS010000082.1	GeneMarkS-2+	CDS	14703	15026	.	-	0	ID=cds-MBO1929797.1;Parent=gene-J4731_22085;Dbxref=NCBI_GP:MBO1929797.1;Name=MBO1929797.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_22085;product=ATP-binding cassette domain-containing protein;protein_id=MBO1929797.1;transl_table=11
JAGETS010000082.1	Genbank	gene	15460	15630	.	-	.	ID=gene-J4731_22090;Name=J4731_22090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_22090
JAGETS010000082.1	GeneMarkS-2+	CDS	15460	15630	.	-	0	ID=cds-MBO1929798.1;Parent=gene-J4731_22090;Dbxref=NCBI_GP:MBO1929798.1;Name=MBO1929798.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_22090;product=hypothetical protein;protein_id=MBO1929798.1;transl_table=11
JAGETS010000082.1	Genbank	pseudogene	15905	16417	.	-	.	ID=gene-J4731_22095;Name=J4731_22095;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_22095;pseudo=true
JAGETS010000082.1	Protein Homology	CDS	15905	16417	.	-	0	ID=cds-J4731_22095;Parent=gene-J4731_22095;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010848953.1;locus_tag=J4731_22095;product=colicin V secretion protein;pseudo=true;transl_table=11
JAGETS010000082.1	Genbank	gene	16442	16948	.	-	.	ID=gene-J4731_22100;Name=J4731_22100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_22100
JAGETS010000082.1	Protein Homology	CDS	16442	16948	.	-	0	ID=cds-MBO1929799.1;Parent=gene-J4731_22100;Dbxref=NCBI_GP:MBO1929799.1;Name=MBO1929799.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024829.1;locus_tag=J4731_22100;product=HlyD family efflux transporter periplasmic adaptor subunit;protein_id=MBO1929799.1;transl_table=11
JAGETS010000082.1	Genbank	pseudogene	17610	18197	.	-	.	ID=gene-J4731_22105;Name=J4731_22105;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_22105;pseudo=true
JAGETS010000082.1	Protein Homology	CDS	17610	18197	.	-	0	ID=cds-J4731_22105;Parent=gene-J4731_22105;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013184270.1;locus_tag=J4731_22105;product=hypothetical protein;pseudo=true;transl_table=11
JAGETS010000082.1	Genbank	pseudogene	19019	19510	.	-	.	ID=gene-J4731_22110;Name=J4731_22110;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_22110;pseudo=true
JAGETS010000082.1	Protein Homology	CDS	19019	19510	.	-	0	ID=cds-J4731_22110;Parent=gene-J4731_22110;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005157977.1;locus_tag=J4731_22110;product=radical SAM protein;pseudo=true;transl_table=11
JAGETS010000082.1	Genbank	pseudogene	20205	21116	.	-	.	ID=gene-J4731_22115;Name=flgL;gbkey=Gene;gene=flgL;gene_biotype=pseudogene;locus_tag=J4731_22115;pseudo=true
JAGETS010000082.1	Protein Homology	CDS	20205	21116	.	-	0	ID=cds-J4731_22115;Parent=gene-J4731_22115;Note=frameshifted;gbkey=CDS;gene=flgL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006813417.1;locus_tag=J4731_22115;product=flagellar hook-associated protein FlgL;pseudo=true;transl_table=11
JAGETS010000082.1	Genbank	pseudogene	21163	22786	.	-	.	ID=gene-J4731_22120;Name=flgK;gbkey=Gene;gene=flgK;gene_biotype=pseudogene;locus_tag=J4731_22120;pseudo=true
JAGETS010000082.1	Protein Homology	CDS	21163	22786	.	-	0	ID=cds-J4731_22120;Parent=gene-J4731_22120;Note=frameshifted;gbkey=CDS;gene=flgK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006657517.1;locus_tag=J4731_22120;product=flagellar hook-associated protein FlgK;pseudo=true;transl_table=11
JAGETS010000082.1	Genbank	pseudogene	22928	23894	.	-	.	ID=gene-J4731_22125;Name=flgJ;gbkey=Gene;gene=flgJ;gene_biotype=pseudogene;locus_tag=J4731_22125;pseudo=true
JAGETS010000082.1	Protein Homology	CDS	22928	23894	.	-	0	ID=cds-J4731_22125;Parent=gene-J4731_22125;Note=frameshifted%3B internal stop;gbkey=CDS;gene=flgJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006657516.1;locus_tag=J4731_22125;product=flagellar assembly peptidoglycan hydrolase FlgJ;pseudo=true;transl_table=11
JAGETS010000082.1	Genbank	pseudogene	23952	24892	.	-	.	ID=gene-J4731_22130;Name=J4731_22130;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_22130;pseudo=true
JAGETS010000082.1	Protein Homology	CDS	23952	24892	.	-	0	ID=cds-J4731_22130;Parent=gene-J4731_22130;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011093288.1;locus_tag=J4731_22130;product=flagellar basal body P-ring protein FlgI;pseudo=true;transl_table=11
JAGETS010000082.1	Genbank	pseudogene	24994	25576	.	-	.	ID=gene-J4731_22135;Name=flgH;gbkey=Gene;gene=flgH;gene_biotype=pseudogene;locus_tag=J4731_22135;pseudo=true
JAGETS010000082.1	Protein Homology	CDS	24994	25576	.	-	0	ID=cds-J4731_22135;Parent=gene-J4731_22135;Note=frameshifted;gbkey=CDS;gene=flgH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016535843.1;locus_tag=J4731_22135;product=flagellar basal body L-ring protein FlgH;pseudo=true;transl_table=11
JAGETS010000082.1	Genbank	gene	25595	25735	.	-	.	ID=gene-J4731_22140;Name=J4731_22140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_22140
JAGETS010000082.1	GeneMarkS-2+	CDS	25595	25735	.	-	0	ID=cds-MBO1929800.1;Parent=gene-J4731_22140;Dbxref=NCBI_GP:MBO1929800.1;Name=MBO1929800.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_22140;product=hypothetical protein;protein_id=MBO1929800.1;transl_table=11
JAGETS010000082.1	Genbank	pseudogene	25833	26608	.	-	.	ID=gene-J4731_22145;Name=flgG;gbkey=Gene;gene=flgG;gene_biotype=pseudogene;locus_tag=J4731_22145;pseudo=true
JAGETS010000082.1	Protein Homology	CDS	25833	26608	.	-	0	ID=cds-J4731_22145;Parent=gene-J4731_22145;Note=frameshifted;gbkey=CDS;gene=flgG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004392149.1;locus_tag=J4731_22145;product=flagellar basal-body rod protein FlgG;pseudo=true;transl_table=11
JAGETS010000082.1	Genbank	pseudogene	26627	27377	.	-	.	ID=gene-J4731_22150;Name=flgF;gbkey=Gene;gene=flgF;gene_biotype=pseudogene;locus_tag=J4731_22150;pseudo=true
JAGETS010000082.1	Protein Homology	CDS	26627	27377	.	-	0	ID=cds-J4731_22150;Parent=gene-J4731_22150;Note=frameshifted;gbkey=CDS;gene=flgF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000349316.1;locus_tag=J4731_22150;product=flagellar basal body rod protein FlgF;pseudo=true;transl_table=11
JAGETS010000082.1	Genbank	pseudogene	27393	28682	.	-	.	ID=gene-J4731_22155;Name=flgE;gbkey=Gene;gene=flgE;gene_biotype=pseudogene;locus_tag=J4731_22155;pseudo=true
JAGETS010000082.1	Protein Homology	CDS	27393	28682	.	-	0	ID=cds-J4731_22155;Parent=gene-J4731_22155;Note=frameshifted%3B internal stop;gbkey=CDS;gene=flgE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000885873.1;locus_tag=J4731_22155;product=flagellar hook protein FlgE;pseudo=true;transl_table=11
JAGETS010000082.1	Genbank	pseudogene	28669	29520	.	-	.	ID=gene-J4731_22160;Name=J4731_22160;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_22160;pseudo=true
JAGETS010000082.1	Protein Homology	CDS	28669	29520	.	-	0	ID=cds-J4731_22160;Parent=gene-J4731_22160;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014658058.1;locus_tag=J4731_22160;product=flagellar basal-body rod modification protein;pseudo=true;transl_table=11
JAGETS010000082.1	Genbank	pseudogene	29533	29932	.	-	.	ID=gene-J4731_22165;Name=flgC;gbkey=Gene;gene=flgC;gene_biotype=pseudogene;locus_tag=J4731_22165;pseudo=true
JAGETS010000082.1	Protein Homology	CDS	29533	29932	.	-	0	ID=cds-J4731_22165;Parent=gene-J4731_22165;Note=frameshifted;gbkey=CDS;gene=flgC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004236840.1;locus_tag=J4731_22165;product=flagellar basal body rod protein FlgC;pseudo=true;transl_table=11
JAGETS010000082.1	Genbank	pseudogene	29910	30349	.	-	.	ID=gene-J4731_22170;Name=flgB;gbkey=Gene;gene=flgB;gene_biotype=pseudogene;locus_tag=J4731_22170;pseudo=true
JAGETS010000082.1	Protein Homology	CDS	29910	30349	.	-	0	ID=cds-J4731_22170;Parent=gene-J4731_22170;Note=frameshifted;gbkey=CDS;gene=flgB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014883362.1;locus_tag=J4731_22170;product=flagellar basal body rod protein FlgB;pseudo=true;transl_table=11
JAGETS010000082.1	Genbank	pseudogene	30584	31218	.	+	.	ID=gene-J4731_22175;Name=flgA;gbkey=Gene;gene=flgA;gene_biotype=pseudogene;locus_tag=J4731_22175;pseudo=true
JAGETS010000082.1	Protein Homology	CDS	30584	31218	.	+	0	ID=cds-J4731_22175;Parent=gene-J4731_22175;Note=frameshifted;gbkey=CDS;gene=flgA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004255676.1;locus_tag=J4731_22175;product=flagellar basal body P-ring formation protein FlgA;pseudo=true;transl_table=11
JAGETS010000082.1	Genbank	pseudogene	31687	31988	.	+	.	ID=gene-J4731_22180;Name=flgM;gbkey=Gene;gene=flgM;gene_biotype=pseudogene;locus_tag=J4731_22180;pseudo=true
JAGETS010000082.1	Protein Homology	CDS	31687	31988	.	+	0	ID=cds-J4731_22180;Parent=gene-J4731_22180;Note=frameshifted;gbkey=CDS;gene=flgM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006657506.1;locus_tag=J4731_22180;product=flagellar biosynthesis anti-sigma factor FlgM;pseudo=true;transl_table=11
JAGETS010000082.1	Genbank	pseudogene	31998	32436	.	+	.	ID=gene-J4731_22185;Name=flgN;gbkey=Gene;gene=flgN;gene_biotype=pseudogene;locus_tag=J4731_22185;pseudo=true
JAGETS010000082.1	Protein Homology	CDS	31998	32436	.	+	0	ID=cds-J4731_22185;Parent=gene-J4731_22185;Note=frameshifted;gbkey=CDS;gene=flgN;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006813432.1;locus_tag=J4731_22185;product=flagellar export chaperone FlgN;pseudo=true;transl_table=11
JAGETS010000082.1	Genbank	pseudogene	32481	32757	.	-	.	ID=gene-J4731_22190;Name=J4731_22190;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_22190;pseudo=true
JAGETS010000082.1	Protein Homology	CDS	32481	32757	.	-	0	ID=cds-J4731_22190;Parent=gene-J4731_22190;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004255684.1;locus_tag=J4731_22190;product=helix-turn-helix domain-containing protein;pseudo=true;transl_table=11
JAGETS010000082.1	Genbank	pseudogene	32985	35059	.	-	.	ID=gene-J4731_22195;Name=flhA;gbkey=Gene;gene=flhA;gene_biotype=pseudogene;locus_tag=J4731_22195;pseudo=true
JAGETS010000082.1	Protein Homology	CDS	32985	35059	.	-	0	ID=cds-J4731_22195;Parent=gene-J4731_22195;Note=frameshifted%3B internal stop;gbkey=CDS;gene=flhA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005284272.1;locus_tag=J4731_22195;product=flagellar biosynthesis protein FlhA;pseudo=true;transl_table=11
JAGETS010000082.1	Genbank	pseudogene	35078	36181	.	-	.	ID=gene-J4731_22200;Name=flhB;gbkey=Gene;gene=flhB;gene_biotype=pseudogene;locus_tag=J4731_22200;pseudo=true
JAGETS010000082.1	Protein Homology	CDS	35078	36181	.	-	0	ID=cds-J4731_22200;Parent=gene-J4731_22200;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;gene=flhB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006684119.1;locus_tag=J4731_22200;product=flagellar type III secretion system protein FlhB;pseudo=true;transl_table=11
JAGETS010000082.1	Genbank	pseudogene	36655	36954	.	+	.	ID=gene-J4731_22205;Name=J4731_22205;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_22205;pseudo=true
JAGETS010000082.1	Protein Homology	CDS	36655	36954	.	+	0	ID=cds-J4731_22205;Parent=gene-J4731_22205;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010847542.1;locus_tag=J4731_22205;product=CcdB family protein;pseudo=true;transl_table=11
JAGETS010000082.1	Genbank	pseudogene	36970	37516	.	+	.	ID=gene-J4731_22210;Name=J4731_22210;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_22210;pseudo=true
JAGETS010000082.1	Protein Homology	CDS	36970	37516	.	+	0	ID=cds-J4731_22210;Parent=gene-J4731_22210;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004255696.1;locus_tag=J4731_22210;product=hypothetical protein;pseudo=true;transl_table=11
JAGETS010000082.1	Genbank	gene	37513	37686	.	-	.	ID=gene-J4731_22215;Name=J4731_22215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_22215
JAGETS010000082.1	GeneMarkS-2+	CDS	37513	37686	.	-	0	ID=cds-MBO1929801.1;Parent=gene-J4731_22215;Dbxref=NCBI_GP:MBO1929801.1;Name=MBO1929801.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_22215;product=hypothetical protein;protein_id=MBO1929801.1;transl_table=11
JAGETS010000082.1	Genbank	pseudogene	37958	38568	.	-	.	ID=gene-J4731_22220;Name=J4731_22220;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_22220;pseudo=true
JAGETS010000082.1	Protein Homology	CDS	37958	38568	.	-	0	ID=cds-J4731_22220;Parent=gene-J4731_22220;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004961441.1;locus_tag=J4731_22220;product=protein phosphatase CheZ;pseudo=true;transl_table=11
JAGETS010000082.1	Genbank	pseudogene	38579	38948	.	-	.	ID=gene-J4731_22225;Name=cheY;gbkey=Gene;gene=cheY;gene_biotype=pseudogene;locus_tag=J4731_22225;pseudo=true
JAGETS010000082.1	Protein Homology	CDS	38579	38948	.	-	0	ID=cds-J4731_22225;Parent=gene-J4731_22225;Note=frameshifted;gbkey=CDS;gene=cheY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004158030.1;locus_tag=J4731_22225;product=chemotaxis response regulator CheY;pseudo=true;transl_table=11
JAGETS010000082.1	Genbank	pseudogene	39063	40078	.	-	.	ID=gene-J4731_22230;Name=J4731_22230;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_22230;pseudo=true
JAGETS010000082.1	Protein Homology	CDS	39063	40078	.	-	0	ID=cds-J4731_22230;Parent=gene-J4731_22230;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000036361.1;locus_tag=J4731_22230;product=chemotaxis response regulator protein-glutamate methylesterase;pseudo=true;transl_table=11
JAGETS010000082.1	Genbank	pseudogene	40078	40903	.	-	.	ID=gene-J4731_22235;Name=J4731_22235;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_22235;pseudo=true
JAGETS010000082.1	Protein Homology	CDS	40078	40903	.	-	0	ID=cds-J4731_22235;Parent=gene-J4731_22235;Note=methylates the MCP%3B frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011816616.1;locus_tag=J4731_22235;product=chemotaxis protein-glutamate O-methyltransferase;pseudo=true;transl_table=11
JAGETS010000082.1	Genbank	pseudogene	41036	42594	.	-	.	ID=gene-J4731_22240;Name=J4731_22240;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_22240;pseudo=true
JAGETS010000082.1	Protein Homology	CDS	41036	42594	.	-	0	ID=cds-J4731_22240;Parent=gene-J4731_22240;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004255718.1;locus_tag=J4731_22240;product=Tar ligand binding domain-containing protein;pseudo=true;transl_table=11
JAGETS010000082.1	Genbank	pseudogene	42711	44393	.	-	.	ID=gene-J4731_22245;Name=J4731_22245;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_22245;pseudo=true
JAGETS010000082.1	Protein Homology	CDS	42711	44393	.	-	0	ID=cds-J4731_22245;Parent=gene-J4731_22245;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004255721.1;locus_tag=J4731_22245;product=Tar ligand binding domain-containing protein;pseudo=true;transl_table=11
JAGETS010000082.1	Genbank	gene	44498	44995	.	-	.	ID=gene-J4731_22250;Name=cheW;gbkey=Gene;gene=cheW;gene_biotype=protein_coding;locus_tag=J4731_22250
JAGETS010000082.1	Protein Homology	CDS	44498	44995	.	-	0	ID=cds-MBO1929802.1;Parent=gene-J4731_22250;Dbxref=NCBI_GP:MBO1929802.1;Name=MBO1929802.1;gbkey=CDS;gene=cheW;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004236862.1;locus_tag=J4731_22250;product=chemotaxis protein CheW;protein_id=MBO1929802.1;transl_table=11
JAGETS010000082.1	Genbank	pseudogene	45066	46273	.	-	.	ID=gene-J4731_22255;Name=J4731_22255;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_22255;pseudo=true
JAGETS010000082.1	Protein Homology	CDS	45066	46273	.	-	0	ID=cds-J4731_22255;Parent=gene-J4731_22255;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015963994.1;locus_tag=J4731_22255;product=chemotaxis protein CheW;pseudo=true;transl_table=11
JAGETS010000082.1	Genbank	gene	46212	46676	.	-	.	ID=gene-J4731_22260;Name=J4731_22260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_22260
JAGETS010000082.1	Protein Homology	CDS	46212	46676	.	-	0	ID=cds-MBO1929803.1;Parent=gene-J4731_22260;Dbxref=NCBI_GP:MBO1929803.1;Name=MBO1929803.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020644.1;locus_tag=J4731_22260;product=hypothetical protein;protein_id=MBO1929803.1;transl_table=11
##sequence-region JAGETS010000083.1 1 29886
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=587
JAGETS010000083.1	Genbank	region	1	29886	.	+	.	ID=JAGETS010000083.1:1..29886;Dbxref=taxon:587;collected-by=NHLS;collection-date=2018;country=South Africa: Pretoria;gbkey=Src;isolation-source=stool;lat-lon=25.7479 S 28.2293 E;mol_type=genomic DNA;nat-host=porcine;strain=SG003
JAGETS010000083.1	Genbank	pseudogene	1	806	.	+	.	ID=gene-J4731_22265;Name=J4731_22265;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_22265;pseudo=true
JAGETS010000083.1	Protein Homology	CDS	1	806	.	+	1	ID=cds-J4731_22265;Parent=gene-J4731_22265;Note=frameshifted%3B internal stop%3B incomplete%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010847677.1;locus_tag=J4731_22265;product=aminotransferase class V-fold PLP-dependent enzyme;pseudo=true;transl_table=11
JAGETS010000083.1	Genbank	pseudogene	924	3284	.	+	.	ID=gene-J4731_22270;Name=J4731_22270;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_22270;pseudo=true
JAGETS010000083.1	Protein Homology	CDS	924	3284	.	+	0	ID=cds-J4731_22270;Parent=gene-J4731_22270;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224387.1;locus_tag=J4731_22270;product=bifunctional aspartate kinase/homoserine dehydrogenase II;pseudo=true;transl_table=11
JAGETS010000083.1	Genbank	pseudogene	3646	6286	.	+	.	ID=gene-J4731_22275;Name=ppc;gbkey=Gene;gene=ppc;gene_biotype=pseudogene;locus_tag=J4731_22275;pseudo=true
JAGETS010000083.1	Protein Homology	CDS	3646	6286	.	+	0	ID=cds-J4731_22275;Parent=gene-J4731_22275;Note=frameshifted%3B internal stop;gbkey=CDS;gene=ppc;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019080279.1;locus_tag=J4731_22275;product=phosphoenolpyruvate carboxylase;pseudo=true;transl_table=11
JAGETS010000083.1	Genbank	pseudogene	6343	7841	.	-	.	ID=gene-J4731_22280;Name=gadC;gbkey=Gene;gene=gadC;gene_biotype=pseudogene;locus_tag=J4731_22280;pseudo=true
JAGETS010000083.1	Protein Homology	CDS	6343	7841	.	-	0	ID=cds-J4731_22280;Parent=gene-J4731_22280;Note=frameshifted%3B internal stop;gbkey=CDS;gene=gadC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004243149.1;locus_tag=J4731_22280;product=glutamate:gamma-aminobutyrate antiporter;pseudo=true;transl_table=11
JAGETS010000083.1	Genbank	pseudogene	7925	9293	.	-	.	ID=gene-J4731_22285;Name=J4731_22285;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_22285;pseudo=true
JAGETS010000083.1	Protein Homology	CDS	7925	9293	.	-	0	ID=cds-J4731_22285;Parent=gene-J4731_22285;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004715186.1;locus_tag=J4731_22285;product=glutamate decarboxylase;pseudo=true;transl_table=11
JAGETS010000083.1	Genbank	pseudogene	10003	10848	.	-	.	ID=gene-J4731_22290;Name=metF;gbkey=Gene;gene=metF;gene_biotype=pseudogene;locus_tag=J4731_22290;pseudo=true
JAGETS010000083.1	Protein Homology	CDS	10003	10848	.	-	0	ID=cds-J4731_22290;Parent=gene-J4731_22290;Note=frameshifted;gbkey=CDS;gene=metF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418376.1;locus_tag=J4731_22290;product=methylenetetrahydrofolate reductase;pseudo=true;transl_table=11
JAGETS010000083.1	Genbank	pseudogene	11070	12190	.	-	.	ID=gene-J4731_22295;Name=argE;gbkey=Gene;gene=argE;gene_biotype=pseudogene;locus_tag=J4731_22295;pseudo=true
JAGETS010000083.1	Protein Homology	CDS	11070	12190	.	-	0	ID=cds-J4731_22295;Parent=gene-J4731_22295;Note=frameshifted%3B internal stop;gbkey=CDS;gene=argE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014657261.1;locus_tag=J4731_22295;product=acetylornithine deacetylase;pseudo=true;transl_table=11
JAGETS010000083.1	Genbank	pseudogene	12293	13284	.	+	.	ID=gene-J4731_22300;Name=argC;gbkey=Gene;gene=argC;gene_biotype=pseudogene;locus_tag=J4731_22300;pseudo=true
JAGETS010000083.1	Protein Homology	CDS	12293	13284	.	+	0	ID=cds-J4731_22300;Parent=gene-J4731_22300;Note=frameshifted;gbkey=CDS;gene=argC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004924573.1;locus_tag=J4731_22300;product=N-acetyl-gamma-glutamyl-phosphate reductase;pseudo=true;transl_table=11
JAGETS010000083.1	Genbank	pseudogene	13298	14075	.	+	.	ID=gene-J4731_22305;Name=argB;gbkey=Gene;gene=argB;gene_biotype=pseudogene;locus_tag=J4731_22305;pseudo=true
JAGETS010000083.1	Protein Homology	CDS	13298	14075	.	+	0	ID=cds-J4731_22305;Parent=gene-J4731_22305;Note=frameshifted%3B internal stop;gbkey=CDS;gene=argB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008913534.1;locus_tag=J4731_22305;product=acetylglutamate kinase;pseudo=true;transl_table=11
JAGETS010000083.1	Genbank	pseudogene	14130	15335	.	+	.	ID=gene-J4731_22310;Name=J4731_22310;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_22310;pseudo=true
JAGETS010000083.1	Protein Homology	CDS	14130	15335	.	+	0	ID=cds-J4731_22310;Parent=gene-J4731_22310;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012147453.1;locus_tag=J4731_22310;product=argininosuccinate synthase;pseudo=true;transl_table=11
JAGETS010000083.1	Genbank	pseudogene	15412	16778	.	+	.	ID=gene-J4731_22315;Name=argH;gbkey=Gene;gene=argH;gene_biotype=pseudogene;locus_tag=J4731_22315;pseudo=true
JAGETS010000083.1	Protein Homology	CDS	15412	16778	.	+	0	ID=cds-J4731_22315;Parent=gene-J4731_22315;Note=frameshifted;gbkey=CDS;gene=argH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709760.1;locus_tag=J4731_22315;product=argininosuccinate lyase;pseudo=true;transl_table=11
JAGETS010000083.1	Genbank	pseudogene	19023	19924	.	+	.	ID=gene-J4731_22320;Name=oxyR;gbkey=Gene;gene=oxyR;gene_biotype=pseudogene;locus_tag=J4731_22320;pseudo=true
JAGETS010000083.1	Protein Homology	CDS	19023	19924	.	+	0	ID=cds-J4731_22320;Parent=gene-J4731_22320;Note=frameshifted;gbkey=CDS;gene=oxyR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004265340.1;locus_tag=J4731_22320;product=DNA-binding transcriptional regulator OxyR;pseudo=true;transl_table=11
JAGETS010000083.1	Genbank	pseudogene	19997	21360	.	-	.	ID=gene-J4731_22325;Name=sthA;gbkey=Gene;gene=sthA;gene_biotype=pseudogene;locus_tag=J4731_22325;pseudo=true
JAGETS010000083.1	Protein Homology	CDS	19997	21360	.	-	0	ID=cds-J4731_22325;Parent=gene-J4731_22325;Note=frameshifted;gbkey=CDS;gene=sthA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463005.1;locus_tag=J4731_22325;product=Si-specific NAD(P)(+) transhydrogenase;pseudo=true;transl_table=11
JAGETS010000083.1	Genbank	pseudogene	21742	22377	.	+	.	ID=gene-J4731_22330;Name=fabR;gbkey=Gene;gene=fabR;gene_biotype=pseudogene;locus_tag=J4731_22330;pseudo=true
JAGETS010000083.1	Protein Homology	CDS	21742	22377	.	+	0	ID=cds-J4731_22330;Parent=gene-J4731_22330;Note=frameshifted;gbkey=CDS;gene=fabR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014833740.1;locus_tag=J4731_22330;product=HTH-type transcriptional repressor FabR;pseudo=true;transl_table=11
JAGETS010000083.1	Genbank	gene	22390	22749	.	+	.	ID=gene-J4731_22335;Name=J4731_22335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_22335
JAGETS010000083.1	Protein Homology	CDS	22390	22749	.	+	0	ID=cds-MBO1929804.1;Parent=gene-J4731_22335;Dbxref=NCBI_GP:MBO1929804.1;Name=MBO1929804.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004236587.1;locus_tag=J4731_22335;product=YijD family membrane protein;protein_id=MBO1929804.1;transl_table=11
JAGETS010000083.1	Genbank	pseudogene	22845	23934	.	-	.	ID=gene-J4731_22340;Name=trmA;gbkey=Gene;gene=trmA;gene_biotype=pseudogene;locus_tag=J4731_22340;pseudo=true
JAGETS010000083.1	Protein Homology	CDS	22845	23934	.	-	0	ID=cds-J4731_22340;Parent=gene-J4731_22340;Note=frameshifted;gbkey=CDS;gene=trmA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004249698.1;locus_tag=J4731_22340;product=tRNA (uridine(54)-C5)-methyltransferase TrmA;pseudo=true;transl_table=11
JAGETS010000083.1	cmsearch	riboswitch	24045	24142	.	+	.	ID=id-JAGETS010000083.1:24045..24142;Dbxref=RFAM:RF00174;Note=cobalamin riboswitch;bound_moiety=adenosylcobalamin;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch
JAGETS010000083.1	Genbank	pseudogene	24216	26063	.	+	.	ID=gene-J4731_22345;Name=btuB;gbkey=Gene;gene=btuB;gene_biotype=pseudogene;locus_tag=J4731_22345;pseudo=true
JAGETS010000083.1	Protein Homology	CDS	24216	26063	.	+	0	ID=cds-J4731_22345;Parent=gene-J4731_22345;Note=frameshifted%3B internal stop;gbkey=CDS;gene=btuB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011148803.1;locus_tag=J4731_22345;product=TonB-dependent vitamin B12 receptor BtuB;pseudo=true;transl_table=11
JAGETS010000083.1	Genbank	pseudogene	26008	26864	.	+	.	ID=gene-J4731_22350;Name=murI;gbkey=Gene;gene=murI;gene_biotype=pseudogene;locus_tag=J4731_22350;pseudo=true
JAGETS010000083.1	Protein Homology	CDS	26008	26864	.	+	0	ID=cds-J4731_22350;Parent=gene-J4731_22350;Note=frameshifted;gbkey=CDS;gene=murI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004265357.1;locus_tag=J4731_22350;product=glutamate racemase;pseudo=true;transl_table=11
JAGETS010000083.1	Genbank	gene	27333	28865	.	+	.	ID=gene-J4731_22355;Name=J4731_22355;gbkey=Gene;gene_biotype=rRNA;locus_tag=J4731_22355
JAGETS010000083.1	cmsearch	rRNA	27333	28865	.	+	.	ID=rna-J4731_22355;Parent=gene-J4731_22355;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=J4731_22355;product=16S ribosomal RNA
JAGETS010000083.1	cmsearch	exon	27333	28865	.	+	.	ID=exon-J4731_22355-1;Parent=rna-J4731_22355;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=J4731_22355;product=16S ribosomal RNA
JAGETS010000083.1	Genbank	gene	28998	29073	.	+	.	ID=gene-J4731_22360;Name=J4731_22360;gbkey=Gene;gene_biotype=tRNA;locus_tag=J4731_22360
JAGETS010000083.1	tRNAscan-SE	tRNA	28998	29073	.	+	.	ID=rna-J4731_22360;Parent=gene-J4731_22360;anticodon=(pos:29032..29034);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=J4731_22360;product=tRNA-Glu
JAGETS010000083.1	tRNAscan-SE	exon	28998	29073	.	+	.	ID=exon-J4731_22360-1;Parent=rna-J4731_22360;anticodon=(pos:29032..29034);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=J4731_22360;product=tRNA-Glu
JAGETS010000083.1	Genbank	gene	29420	29886	.	+	.	ID=gene-J4731_22365;Name=J4731_22365;end_range=29886,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=J4731_22365;partial=true
JAGETS010000083.1	cmsearch	rRNA	29420	29886	.	+	.	ID=rna-J4731_22365;Parent=gene-J4731_22365;Dbxref=RFAM:RF02541;end_range=29886,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=J4731_22365;partial=true;product=23S ribosomal RNA
JAGETS010000083.1	cmsearch	exon	29420	29886	.	+	.	ID=exon-J4731_22365-1;Parent=rna-J4731_22365;Dbxref=RFAM:RF02541;end_range=29886,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=J4731_22365;partial=true;product=23S ribosomal RNA
##sequence-region JAGETS010000084.1 1 38234
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=587
JAGETS010000084.1	Genbank	region	1	38234	.	+	.	ID=JAGETS010000084.1:1..38234;Dbxref=taxon:587;collected-by=NHLS;collection-date=2018;country=South Africa: Pretoria;gbkey=Src;isolation-source=stool;lat-lon=25.7479 S 28.2293 E;mol_type=genomic DNA;nat-host=porcine;strain=SG003
JAGETS010000084.1	Genbank	pseudogene	183	1244	.	+	.	ID=gene-J4731_22370;Name=lptG;gbkey=Gene;gene=lptG;gene_biotype=pseudogene;locus_tag=J4731_22370;pseudo=true
JAGETS010000084.1	Protein Homology	CDS	183	1244	.	+	0	ID=cds-J4731_22370;Parent=gene-J4731_22370;Note=frameshifted%3B internal stop;gbkey=CDS;gene=lptG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006658425.1;locus_tag=J4731_22370;product=LPS export ABC transporter permease LptG;pseudo=true;transl_table=11
JAGETS010000084.1	Genbank	pseudogene	2618	3835	.	-	.	ID=gene-J4731_22375;Name=ampH;gbkey=Gene;gene=ampH;gene_biotype=pseudogene;locus_tag=J4731_22375;pseudo=true
JAGETS010000084.1	Protein Homology	CDS	2618	3835	.	-	0	ID=cds-J4731_22375;Parent=gene-J4731_22375;Note=frameshifted;gbkey=CDS;gene=ampH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006658426.1;locus_tag=J4731_22375;product=D-alanyl-D-alanine-carboxypeptidase/endopeptidase AmpH;pseudo=true;transl_table=11
JAGETS010000084.1	Genbank	pseudogene	4515	5318	.	+	.	ID=gene-J4731_22380;Name=J4731_22380;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_22380;pseudo=true
JAGETS010000084.1	Protein Homology	CDS	4515	5318	.	+	0	ID=cds-J4731_22380;Parent=gene-J4731_22380;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313280.1;locus_tag=J4731_22380;product=integrase arm-type DNA-binding domain-containing protein;pseudo=true;transl_table=11
JAGETS010000084.1	Genbank	gene	5459	5752	.	+	.	ID=gene-J4731_22385;Name=J4731_22385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_22385
JAGETS010000084.1	Protein Homology	CDS	5459	5752	.	+	0	ID=cds-MBO1929805.1;Parent=gene-J4731_22385;Dbxref=NCBI_GP:MBO1929805.1;Name=MBO1929805.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012798.1;locus_tag=J4731_22385;product=tyrosine-type recombinase/integrase;protein_id=MBO1929805.1;transl_table=11
JAGETS010000084.1	Genbank	gene	5977	7008	.	-	.	ID=gene-J4731_22390;Name=J4731_22390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_22390
JAGETS010000084.1	Protein Homology	CDS	5977	7008	.	-	0	ID=cds-MBO1929806.1;Parent=gene-J4731_22390;Dbxref=NCBI_GP:MBO1929806.1;Name=MBO1929806.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024053.1%2CHMM:NF025918.1;locus_tag=J4731_22390;product=HNH endonuclease;protein_id=MBO1929806.1;transl_table=11
JAGETS010000084.1	Genbank	pseudogene	7443	10099	.	-	.	ID=gene-J4731_22395;Name=J4731_22395;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_22395;pseudo=true
JAGETS010000084.1	Protein Homology	CDS	7443	10099	.	-	0	ID=cds-J4731_22395;Parent=gene-J4731_22395;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001587069.1;locus_tag=J4731_22395;product=ATP-binding protein;pseudo=true;transl_table=11
JAGETS010000084.1	Genbank	gene	10198	10752	.	-	.	ID=gene-J4731_22400;Name=J4731_22400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_22400
JAGETS010000084.1	GeneMarkS-2+	CDS	10198	10752	.	-	0	ID=cds-MBO1929807.1;Parent=gene-J4731_22400;Dbxref=NCBI_GP:MBO1929807.1;Name=MBO1929807.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_22400;product=hypothetical protein;protein_id=MBO1929807.1;transl_table=11
JAGETS010000084.1	Genbank	gene	10834	11145	.	-	.	ID=gene-J4731_22405;Name=J4731_22405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_22405
JAGETS010000084.1	GeneMarkS-2+	CDS	10834	11145	.	-	0	ID=cds-MBO1929808.1;Parent=gene-J4731_22405;Dbxref=NCBI_GP:MBO1929808.1;Name=MBO1929808.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_22405;product=hypothetical protein;protein_id=MBO1929808.1;transl_table=11
JAGETS010000084.1	Genbank	gene	11178	11372	.	-	.	ID=gene-J4731_22410;Name=J4731_22410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_22410
JAGETS010000084.1	GeneMarkS-2+	CDS	11178	11372	.	-	0	ID=cds-MBO1929809.1;Parent=gene-J4731_22410;Dbxref=NCBI_GP:MBO1929809.1;Name=MBO1929809.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_22410;product=hypothetical protein;protein_id=MBO1929809.1;transl_table=11
JAGETS010000084.1	Genbank	gene	11936	12199	.	-	.	ID=gene-J4731_22415;Name=J4731_22415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_22415
JAGETS010000084.1	GeneMarkS-2+	CDS	11936	12199	.	-	0	ID=cds-MBO1929810.1;Parent=gene-J4731_22415;Dbxref=NCBI_GP:MBO1929810.1;Name=MBO1929810.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_22415;product=hypothetical protein;protein_id=MBO1929810.1;transl_table=11
JAGETS010000084.1	Genbank	gene	12253	12447	.	-	.	ID=gene-J4731_22420;Name=J4731_22420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_22420
JAGETS010000084.1	GeneMarkS-2+	CDS	12253	12447	.	-	0	ID=cds-MBO1929811.1;Parent=gene-J4731_22420;Dbxref=NCBI_GP:MBO1929811.1;Name=MBO1929811.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_22420;product=hypothetical protein;protein_id=MBO1929811.1;transl_table=11
JAGETS010000084.1	Genbank	gene	12505	12771	.	-	.	ID=gene-J4731_22425;Name=J4731_22425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_22425
JAGETS010000084.1	GeneMarkS-2+	CDS	12505	12771	.	-	0	ID=cds-MBO1929812.1;Parent=gene-J4731_22425;Dbxref=NCBI_GP:MBO1929812.1;Name=MBO1929812.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_22425;product=hypothetical protein;protein_id=MBO1929812.1;transl_table=11
JAGETS010000084.1	Genbank	gene	12853	13125	.	-	.	ID=gene-J4731_22430;Name=J4731_22430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_22430
JAGETS010000084.1	Protein Homology	CDS	12853	13125	.	-	0	ID=cds-MBO1929813.1;Parent=gene-J4731_22430;Dbxref=NCBI_GP:MBO1929813.1;Name=MBO1929813.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012570.1;locus_tag=J4731_22430;product=dynamin family protein;protein_id=MBO1929813.1;transl_table=11
JAGETS010000084.1	Genbank	gene	13178	13444	.	-	.	ID=gene-J4731_22435;Name=J4731_22435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_22435
JAGETS010000084.1	GeneMarkS-2+	CDS	13178	13444	.	-	0	ID=cds-MBO1929814.1;Parent=gene-J4731_22435;Dbxref=NCBI_GP:MBO1929814.1;Name=MBO1929814.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_22435;product=hypothetical protein;protein_id=MBO1929814.1;transl_table=11
JAGETS010000084.1	Genbank	gene	13496	13633	.	-	.	ID=gene-J4731_22440;Name=J4731_22440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_22440
JAGETS010000084.1	GeneMarkS-2+	CDS	13496	13633	.	-	0	ID=cds-MBO1929815.1;Parent=gene-J4731_22440;Dbxref=NCBI_GP:MBO1929815.1;Name=MBO1929815.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_22440;product=hypothetical protein;protein_id=MBO1929815.1;transl_table=11
JAGETS010000084.1	Genbank	gene	14136	14366	.	-	.	ID=gene-J4731_22445;Name=J4731_22445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_22445
JAGETS010000084.1	Protein Homology	CDS	14136	14366	.	-	0	ID=cds-MBO1929816.1;Parent=gene-J4731_22445;Dbxref=NCBI_GP:MBO1929816.1;Name=MBO1929816.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012570.1;locus_tag=J4731_22445;product=dynamin family protein;protein_id=MBO1929816.1;transl_table=11
JAGETS010000084.1	Genbank	gene	14809	15246	.	-	.	ID=gene-J4731_22450;Name=J4731_22450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_22450
JAGETS010000084.1	Protein Homology	CDS	14809	15246	.	-	0	ID=cds-MBO1929817.1;Parent=gene-J4731_22450;Dbxref=NCBI_GP:MBO1929817.1;Name=MBO1929817.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019884.1;locus_tag=J4731_22450;product=HTH domain-containing protein;protein_id=MBO1929817.1;transl_table=11
JAGETS010000084.1	Genbank	pseudogene	15654	15926	.	+	.	ID=gene-J4731_22455;Name=J4731_22455;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_22455;pseudo=true
JAGETS010000084.1	Protein Homology	CDS	15654	15926	.	+	0	ID=cds-J4731_22455;Parent=gene-J4731_22455;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004186752.1;locus_tag=J4731_22455;product=integrase;pseudo=true;transl_table=11
JAGETS010000084.1	Genbank	pseudogene	16120	19613	.	+	.	ID=gene-J4731_22460;Name=hsdR;gbkey=Gene;gene=hsdR;gene_biotype=pseudogene;locus_tag=J4731_22460;pseudo=true
JAGETS010000084.1	Protein Homology	CDS	16120	19613	.	+	0	ID=cds-J4731_22460;Parent=gene-J4731_22460;Note=frameshifted;gbkey=CDS;gene=hsdR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463385.1;locus_tag=J4731_22460;product=type I restriction-modification system endonuclease;pseudo=true;transl_table=11
JAGETS010000084.1	Genbank	pseudogene	19685	21266	.	+	.	ID=gene-J4731_22465;Name=J4731_22465;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_22465;pseudo=true
JAGETS010000084.1	Protein Homology	CDS	19685	21266	.	+	0	ID=cds-J4731_22465;Parent=gene-J4731_22465;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463384.1;locus_tag=J4731_22465;product=N-6 DNA methylase;pseudo=true;transl_table=11
JAGETS010000084.1	Genbank	gene	21263	21553	.	+	.	ID=gene-J4731_22470;Name=J4731_22470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_22470
JAGETS010000084.1	GeneMarkS-2+	CDS	21263	21553	.	+	0	ID=cds-MBO1929818.1;Parent=gene-J4731_22470;Dbxref=NCBI_GP:MBO1929818.1;Name=MBO1929818.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_22470;product=hypothetical protein;protein_id=MBO1929818.1;transl_table=11
JAGETS010000084.1	Genbank	pseudogene	21715	21865	.	+	.	ID=gene-J4731_22475;Name=J4731_22475;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_22475;pseudo=true
JAGETS010000084.1	Protein Homology	CDS	21715	21865	.	+	0	ID=cds-J4731_22475;Parent=gene-J4731_22475;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463383.1;locus_tag=J4731_22475;product=restriction endonuclease subunit S;pseudo=true;transl_table=11
JAGETS010000084.1	Genbank	pseudogene	22330	22580	.	+	.	ID=gene-J4731_22480;Name=J4731_22480;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_22480;pseudo=true
JAGETS010000084.1	Protein Homology	CDS	22330	22580	.	+	0	ID=cds-J4731_22480;Parent=gene-J4731_22480;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000602854.1;locus_tag=J4731_22480;product=type I restriction endonuclease subunit R;pseudo=true;transl_table=11
JAGETS010000084.1	Genbank	gene	22856	23194	.	-	.	ID=gene-J4731_22485;Name=J4731_22485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_22485
JAGETS010000084.1	GeneMarkS-2+	CDS	22856	23194	.	-	0	ID=cds-MBO1929819.1;Parent=gene-J4731_22485;Dbxref=NCBI_GP:MBO1929819.1;Name=MBO1929819.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_22485;product=hypothetical protein;protein_id=MBO1929819.1;transl_table=11
JAGETS010000084.1	Genbank	gene	23405	23752	.	-	.	ID=gene-J4731_22490;Name=J4731_22490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_22490
JAGETS010000084.1	GeneMarkS-2+	CDS	23405	23752	.	-	0	ID=cds-MBO1929820.1;Parent=gene-J4731_22490;Dbxref=NCBI_GP:MBO1929820.1;Name=MBO1929820.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_22490;product=hypothetical protein;protein_id=MBO1929820.1;transl_table=11
JAGETS010000084.1	Genbank	gene	23806	24384	.	-	.	ID=gene-J4731_22495;Name=J4731_22495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_22495
JAGETS010000084.1	Protein Homology	CDS	23806	24384	.	-	0	ID=cds-MBO1929821.1;Parent=gene-J4731_22495;Dbxref=NCBI_GP:MBO1929821.1;Name=MBO1929821.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020926.1;locus_tag=J4731_22495;product=DUF1998 domain-containing protein;protein_id=MBO1929821.1;transl_table=11
JAGETS010000084.1	Genbank	gene	24348	24686	.	-	.	ID=gene-J4731_22500;Name=J4731_22500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_22500
JAGETS010000084.1	GeneMarkS-2+	CDS	24348	24686	.	-	0	ID=cds-MBO1929822.1;Parent=gene-J4731_22500;Dbxref=NCBI_GP:MBO1929822.1;Name=MBO1929822.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_22500;product=hypothetical protein;protein_id=MBO1929822.1;transl_table=11
JAGETS010000084.1	Genbank	gene	24649	24930	.	-	.	ID=gene-J4731_22505;Name=J4731_22505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_22505
JAGETS010000084.1	GeneMarkS-2+	CDS	24649	24930	.	-	0	ID=cds-MBO1929823.1;Parent=gene-J4731_22505;Dbxref=NCBI_GP:MBO1929823.1;Name=MBO1929823.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_22505;product=hypothetical protein;protein_id=MBO1929823.1;transl_table=11
JAGETS010000084.1	Genbank	gene	25097	25285	.	-	.	ID=gene-J4731_22510;Name=J4731_22510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_22510
JAGETS010000084.1	GeneMarkS-2+	CDS	25097	25285	.	-	0	ID=cds-MBO1929824.1;Parent=gene-J4731_22510;Dbxref=NCBI_GP:MBO1929824.1;Name=MBO1929824.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_22510;product=hypothetical protein;protein_id=MBO1929824.1;transl_table=11
JAGETS010000084.1	Genbank	gene	25703	25894	.	-	.	ID=gene-J4731_22515;Name=J4731_22515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_22515
JAGETS010000084.1	GeneMarkS-2+	CDS	25703	25894	.	-	0	ID=cds-MBO1929825.1;Parent=gene-J4731_22515;Dbxref=NCBI_GP:MBO1929825.1;Name=MBO1929825.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_22515;product=hypothetical protein;protein_id=MBO1929825.1;transl_table=11
JAGETS010000084.1	Genbank	gene	26395	26640	.	-	.	ID=gene-J4731_22520;Name=J4731_22520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_22520
JAGETS010000084.1	GeneMarkS-2+	CDS	26395	26640	.	-	0	ID=cds-MBO1929826.1;Parent=gene-J4731_22520;Dbxref=NCBI_GP:MBO1929826.1;Name=MBO1929826.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_22520;product=hypothetical protein;protein_id=MBO1929826.1;transl_table=11
JAGETS010000084.1	Genbank	gene	26672	27052	.	-	.	ID=gene-J4731_22525;Name=J4731_22525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_22525
JAGETS010000084.1	GeneMarkS-2+	CDS	26672	27052	.	-	0	ID=cds-MBO1929827.1;Parent=gene-J4731_22525;Dbxref=NCBI_GP:MBO1929827.1;Name=MBO1929827.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_22525;product=hypothetical protein;protein_id=MBO1929827.1;transl_table=11
JAGETS010000084.1	Genbank	gene	27640	27930	.	-	.	ID=gene-J4731_22530;Name=J4731_22530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_22530
JAGETS010000084.1	GeneMarkS-2+	CDS	27640	27930	.	-	0	ID=cds-MBO1929828.1;Parent=gene-J4731_22530;Dbxref=NCBI_GP:MBO1929828.1;Name=MBO1929828.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_22530;product=hypothetical protein;protein_id=MBO1929828.1;transl_table=11
JAGETS010000084.1	Genbank	pseudogene	28132	28908	.	-	.	ID=gene-J4731_22535;Name=J4731_22535;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_22535;pseudo=true
JAGETS010000084.1	Protein Homology	CDS	28132	28908	.	-	0	ID=cds-J4731_22535;Parent=gene-J4731_22535;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001622586.1;locus_tag=J4731_22535;product=DEAD/DEAH box helicase;pseudo=true;transl_table=11
JAGETS010000084.1	Genbank	pseudogene	28921	32194	.	-	.	ID=gene-J4731_22540;Name=J4731_22540;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_22540;pseudo=true
JAGETS010000084.1	Protein Homology	CDS	28921	32194	.	-	0	ID=cds-J4731_22540;Parent=gene-J4731_22540;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_048814575.1;locus_tag=J4731_22540;product=STY4851/ECs_5259 family protein;pseudo=true;transl_table=11
JAGETS010000084.1	Genbank	gene	33235	33471	.	-	.	ID=gene-J4731_22545;Name=J4731_22545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_22545
JAGETS010000084.1	Protein Homology	CDS	33235	33471	.	-	0	ID=cds-MBO1929829.1;Parent=gene-J4731_22545;Dbxref=NCBI_GP:MBO1929829.1;Name=MBO1929829.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006662682.1;locus_tag=J4731_22545;product=AlpA family transcriptional regulator;protein_id=MBO1929829.1;transl_table=11
JAGETS010000084.1	Genbank	pseudogene	33663	34240	.	-	.	ID=gene-J4731_22550;Name=J4731_22550;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_22550;pseudo=true
JAGETS010000084.1	Protein Homology	CDS	33663	34240	.	-	0	ID=cds-J4731_22550;Parent=gene-J4731_22550;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019078274.1;locus_tag=J4731_22550;product=inovirus-type Gp2 protein;pseudo=true;transl_table=11
JAGETS010000084.1	Genbank	gene	34885	35037	.	+	.	ID=gene-J4731_22555;Name=J4731_22555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_22555
JAGETS010000084.1	GeneMarkS-2+	CDS	34885	35037	.	+	0	ID=cds-MBO1929830.1;Parent=gene-J4731_22555;Dbxref=NCBI_GP:MBO1929830.1;Name=MBO1929830.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_22555;product=hypothetical protein;protein_id=MBO1929830.1;transl_table=11
JAGETS010000084.1	Genbank	gene	35111	35458	.	+	.	ID=gene-J4731_22560;Name=J4731_22560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_22560
JAGETS010000084.1	GeneMarkS-2+	CDS	35111	35458	.	+	0	ID=cds-MBO1929831.1;Parent=gene-J4731_22560;Dbxref=NCBI_GP:MBO1929831.1;Name=MBO1929831.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_22560;product=hypothetical protein;protein_id=MBO1929831.1;transl_table=11
JAGETS010000084.1	Genbank	pseudogene	35996	36844	.	+	.	ID=gene-J4731_22565;Name=J4731_22565;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_22565;pseudo=true
JAGETS010000084.1	Protein Homology	CDS	35996	36844	.	+	0	ID=cds-J4731_22565;Parent=gene-J4731_22565;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000682561.1;locus_tag=J4731_22565;product=50S ribosome-binding GTPase;pseudo=true;transl_table=11
JAGETS010000084.1	Genbank	pseudogene	37172	37605	.	+	.	ID=gene-J4731_22570;Name=J4731_22570;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_22570;pseudo=true
JAGETS010000084.1	Protein Homology	CDS	37172	37605	.	+	0	ID=cds-J4731_22570;Parent=gene-J4731_22570;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000791790.1;locus_tag=J4731_22570;product=hypothetical protein;pseudo=true;transl_table=11
##sequence-region JAGETS010000085.1 1 40499
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=587
JAGETS010000085.1	Genbank	region	1	40499	.	+	.	ID=JAGETS010000085.1:1..40499;Dbxref=taxon:587;collected-by=NHLS;collection-date=2018;country=South Africa: Pretoria;gbkey=Src;isolation-source=stool;lat-lon=25.7479 S 28.2293 E;mol_type=genomic DNA;nat-host=porcine;strain=SG003
JAGETS010000085.1	Genbank	pseudogene	1	773	.	+	.	ID=gene-J4731_22575;Name=torC;gbkey=Gene;gene=torC;gene_biotype=pseudogene;locus_tag=J4731_22575;pseudo=true
JAGETS010000085.1	Protein Homology	CDS	1	773	.	+	0	ID=cds-J4731_22575;Parent=gene-J4731_22575;Note=frameshifted%3B incomplete%3B missing N-terminus;gbkey=CDS;gene=torC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012847176.1;locus_tag=J4731_22575;product=pentaheme c-type cytochrome TorC;pseudo=true;transl_table=11
JAGETS010000085.1	Genbank	pseudogene	788	3313	.	+	.	ID=gene-J4731_22580;Name=torA;gbkey=Gene;gene=torA;gene_biotype=pseudogene;locus_tag=J4731_22580;pseudo=true
JAGETS010000085.1	Protein Homology	CDS	788	3313	.	+	0	ID=cds-J4731_22580;Parent=gene-J4731_22580;Note=frameshifted%3B internal stop;gbkey=CDS;gene=torA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004262365.1;locus_tag=J4731_22580;product=trimethylamine-N-oxide reductase TorA;pseudo=true;transl_table=11
JAGETS010000085.1	Genbank	pseudogene	3310	3916	.	+	.	ID=gene-J4731_22585;Name=torD;gbkey=Gene;gene=torD;gene_biotype=pseudogene;locus_tag=J4731_22585;pseudo=true
JAGETS010000085.1	Protein Homology	CDS	3310	3916	.	+	0	ID=cds-J4731_22585;Parent=gene-J4731_22585;Note=frameshifted;gbkey=CDS;gene=torD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004262368.1;locus_tag=J4731_22585;product=molecular chaperone TorD;pseudo=true;transl_table=11
JAGETS010000085.1	Genbank	pseudogene	4016	4332	.	-	.	ID=gene-J4731_22590;Name=J4731_22590;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_22590;pseudo=true
JAGETS010000085.1	Protein Homology	CDS	4016	4332	.	-	0	ID=cds-J4731_22590;Parent=gene-J4731_22590;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004262371.1;locus_tag=J4731_22590;product=hypothetical protein;pseudo=true;transl_table=11
JAGETS010000085.1	Genbank	pseudogene	4349	4970	.	-	.	ID=gene-J4731_22595;Name=J4731_22595;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_22595;pseudo=true
JAGETS010000085.1	Protein Homology	CDS	4349	4970	.	-	0	ID=cds-J4731_22595;Parent=gene-J4731_22595;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_021806725.1;locus_tag=J4731_22595;product=SDR family oxidoreductase;pseudo=true;transl_table=11
JAGETS010000085.1	Genbank	gene	5491	6192	.	+	.	ID=gene-J4731_22600;Name=J4731_22600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_22600
JAGETS010000085.1	Protein Homology	CDS	5491	6192	.	+	0	ID=cds-MBO1929832.1;Parent=gene-J4731_22600;Dbxref=NCBI_GP:MBO1929832.1;Name=MBO1929832.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015833390.1;locus_tag=J4731_22600;product=transferrin-binding protein-like solute binding protein;protein_id=MBO1929832.1;transl_table=11
JAGETS010000085.1	Genbank	gene	6227	6757	.	+	.	ID=gene-J4731_22605;Name=J4731_22605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_22605
JAGETS010000085.1	Protein Homology	CDS	6227	6757	.	+	0	ID=cds-MBO1929833.1;Parent=gene-J4731_22605;Dbxref=NCBI_GP:MBO1929833.1;Name=MBO1929833.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025910.1;locus_tag=J4731_22605;product=tetratricopeptide repeat protein;protein_id=MBO1929833.1;transl_table=11
JAGETS010000085.1	Genbank	gene	6729	7094	.	+	.	ID=gene-J4731_22610;Name=J4731_22610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_22610
JAGETS010000085.1	Protein Homology	CDS	6729	7094	.	+	0	ID=cds-MBO1929834.1;Parent=gene-J4731_22610;Dbxref=NCBI_GP:MBO1929834.1;Name=MBO1929834.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016462.1;locus_tag=J4731_22610;product=DUF560 domain-containing protein;protein_id=MBO1929834.1;transl_table=11
JAGETS010000085.1	Genbank	gene	7030	7719	.	+	.	ID=gene-J4731_22615;Name=J4731_22615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_22615
JAGETS010000085.1	Protein Homology	CDS	7030	7719	.	+	0	ID=cds-MBO1929835.1;Parent=gene-J4731_22615;Dbxref=NCBI_GP:MBO1929835.1;Name=MBO1929835.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016462.1;locus_tag=J4731_22615;product=DUF560 domain-containing protein;protein_id=MBO1929835.1;transl_table=11
JAGETS010000085.1	Genbank	gene	7979	8314	.	+	.	ID=gene-J4731_22620;Name=J4731_22620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_22620
JAGETS010000085.1	GeneMarkS-2+	CDS	7979	8314	.	+	0	ID=cds-MBO1929836.1;Parent=gene-J4731_22620;Dbxref=NCBI_GP:MBO1929836.1;Name=MBO1929836.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_22620;product=hypothetical protein;protein_id=MBO1929836.1;transl_table=11
JAGETS010000085.1	Genbank	gene	8523	9068	.	+	.	ID=gene-J4731_22625;Name=J4731_22625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_22625
JAGETS010000085.1	GeneMarkS-2+	CDS	8523	9068	.	+	0	ID=cds-MBO1929837.1;Parent=gene-J4731_22625;Dbxref=NCBI_GP:MBO1929837.1;Name=MBO1929837.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_22625;product=hypothetical protein;protein_id=MBO1929837.1;transl_table=11
JAGETS010000085.1	Genbank	gene	9369	9611	.	+	.	ID=gene-J4731_22630;Name=J4731_22630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_22630
JAGETS010000085.1	GeneMarkS-2+	CDS	9369	9611	.	+	0	ID=cds-MBO1929838.1;Parent=gene-J4731_22630;Dbxref=NCBI_GP:MBO1929838.1;Name=MBO1929838.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_22630;product=hypothetical protein;protein_id=MBO1929838.1;transl_table=11
JAGETS010000085.1	Genbank	gene	9740	9955	.	+	.	ID=gene-J4731_22635;Name=J4731_22635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_22635
JAGETS010000085.1	GeneMarkS-2+	CDS	9740	9955	.	+	0	ID=cds-MBO1929839.1;Parent=gene-J4731_22635;Dbxref=NCBI_GP:MBO1929839.1;Name=MBO1929839.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_22635;product=hypothetical protein;protein_id=MBO1929839.1;transl_table=11
JAGETS010000085.1	Genbank	gene	10381	10620	.	+	.	ID=gene-J4731_22640;Name=J4731_22640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_22640
JAGETS010000085.1	GeneMarkS-2+	CDS	10381	10620	.	+	0	ID=cds-MBO1929840.1;Parent=gene-J4731_22640;Dbxref=NCBI_GP:MBO1929840.1;Name=MBO1929840.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_22640;product=TonB-dependent receptor;protein_id=MBO1929840.1;transl_table=11
JAGETS010000085.1	Genbank	pseudogene	11989	12771	.	+	.	ID=gene-J4731_22645;Name=J4731_22645;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_22645;pseudo=true
JAGETS010000085.1	Protein Homology	CDS	11989	12771	.	+	0	ID=cds-J4731_22645;Parent=gene-J4731_22645;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004241147.1;locus_tag=J4731_22645;product=DUF3100 domain-containing protein;pseudo=true;transl_table=11
JAGETS010000085.1	Genbank	pseudogene	12784	13258	.	+	.	ID=gene-J4731_22650;Name=J4731_22650;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_22650;pseudo=true
JAGETS010000085.1	Protein Homology	CDS	12784	13258	.	+	0	ID=cds-J4731_22650;Parent=gene-J4731_22650;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004241148.1;locus_tag=J4731_22650;product=hypothetical protein;pseudo=true;transl_table=11
JAGETS010000085.1	Genbank	pseudogene	13277	14582	.	+	.	ID=gene-J4731_22655;Name=J4731_22655;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_22655;pseudo=true
JAGETS010000085.1	Protein Homology	CDS	13277	14582	.	+	0	ID=cds-J4731_22655;Parent=gene-J4731_22655;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004241149.1;locus_tag=J4731_22655;product=amidohydrolase;pseudo=true;transl_table=11
JAGETS010000085.1	Genbank	pseudogene	15152	16307	.	+	.	ID=gene-J4731_22660;Name=J4731_22660;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_22660;pseudo=true
JAGETS010000085.1	Protein Homology	CDS	15152	16307	.	+	0	ID=cds-J4731_22660;Parent=gene-J4731_22660;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246396.1;locus_tag=J4731_22660;product=amidohydrolase;pseudo=true;transl_table=11
JAGETS010000085.1	Genbank	pseudogene	16411	17384	.	-	.	ID=gene-J4731_22665;Name=J4731_22665;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_22665;pseudo=true
JAGETS010000085.1	Protein Homology	CDS	16411	17384	.	-	0	ID=cds-J4731_22665;Parent=gene-J4731_22665;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004262401.1;locus_tag=J4731_22665;product=LysR family transcriptional regulator;pseudo=true;transl_table=11
JAGETS010000085.1	Genbank	pseudogene	17766	18012	.	-	.	ID=gene-J4731_22670;Name=J4731_22670;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_22670;pseudo=true
JAGETS010000085.1	Protein Homology	CDS	17766	18012	.	-	0	ID=cds-J4731_22670;Parent=gene-J4731_22670;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004262407.1;locus_tag=J4731_22670;product=helix-turn-helix transcriptional regulator;pseudo=true;transl_table=11
JAGETS010000085.1	Genbank	gene	18440	18679	.	-	.	ID=gene-J4731_22675;Name=J4731_22675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_22675
JAGETS010000085.1	GeneMarkS-2+	CDS	18440	18679	.	-	0	ID=cds-MBO1929841.1;Parent=gene-J4731_22675;Dbxref=NCBI_GP:MBO1929841.1;Name=MBO1929841.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_22675;product=type 1 fimbrial protein;protein_id=MBO1929841.1;transl_table=11
JAGETS010000085.1	Genbank	gene	18782	18961	.	-	.	ID=gene-J4731_22680;Name=J4731_22680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_22680
JAGETS010000085.1	GeneMarkS-2+	CDS	18782	18961	.	-	0	ID=cds-MBO1929842.1;Parent=gene-J4731_22680;Dbxref=NCBI_GP:MBO1929842.1;Name=MBO1929842.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_22680;product=hypothetical protein;protein_id=MBO1929842.1;transl_table=11
JAGETS010000085.1	Genbank	gene	19610	19786	.	-	.	ID=gene-J4731_22685;Name=J4731_22685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_22685
JAGETS010000085.1	GeneMarkS-2+	CDS	19610	19786	.	-	0	ID=cds-MBO1929843.1;Parent=gene-J4731_22685;Dbxref=NCBI_GP:MBO1929843.1;Name=MBO1929843.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_22685;product=hypothetical protein;protein_id=MBO1929843.1;transl_table=11
JAGETS010000085.1	Genbank	gene	19804	20019	.	-	.	ID=gene-J4731_22690;Name=J4731_22690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_22690
JAGETS010000085.1	GeneMarkS-2+	CDS	19804	20019	.	-	0	ID=cds-MBO1929844.1;Parent=gene-J4731_22690;Dbxref=NCBI_GP:MBO1929844.1;Name=MBO1929844.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_22690;product=hypothetical protein;protein_id=MBO1929844.1;transl_table=11
JAGETS010000085.1	Genbank	gene	20162	20425	.	-	.	ID=gene-J4731_22695;Name=J4731_22695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_22695
JAGETS010000085.1	GeneMarkS-2+	CDS	20162	20425	.	-	0	ID=cds-MBO1929845.1;Parent=gene-J4731_22695;Dbxref=NCBI_GP:MBO1929845.1;Name=MBO1929845.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_22695;product=hypothetical protein;protein_id=MBO1929845.1;transl_table=11
JAGETS010000085.1	Genbank	gene	20431	20637	.	-	.	ID=gene-J4731_22700;Name=J4731_22700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_22700
JAGETS010000085.1	GeneMarkS-2+	CDS	20431	20637	.	-	0	ID=cds-MBO1929846.1;Parent=gene-J4731_22700;Dbxref=NCBI_GP:MBO1929846.1;Name=MBO1929846.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_22700;product=type 1 fimbrial protein;protein_id=MBO1929846.1;transl_table=11
JAGETS010000085.1	Genbank	gene	20809	21123	.	-	.	ID=gene-J4731_22705;Name=J4731_22705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_22705
JAGETS010000085.1	Protein Homology	CDS	20809	21123	.	-	0	ID=cds-MBO1929847.1;Parent=gene-J4731_22705;Dbxref=NCBI_GP:MBO1929847.1;Name=MBO1929847.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012635.1;locus_tag=J4731_22705;product=fimbrial protein;protein_id=MBO1929847.1;transl_table=11
JAGETS010000085.1	Genbank	gene	21519	21836	.	-	.	ID=gene-J4731_22710;Name=J4731_22710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_22710
JAGETS010000085.1	Protein Homology	CDS	21519	21836	.	-	0	ID=cds-MBO1929848.1;Parent=gene-J4731_22710;Dbxref=NCBI_GP:MBO1929848.1;Name=MBO1929848.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025319.1;locus_tag=J4731_22710;product=hypothetical protein;protein_id=MBO1929848.1;transl_table=11
JAGETS010000085.1	Genbank	gene	21878	22384	.	-	.	ID=gene-J4731_22715;Name=J4731_22715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_22715
JAGETS010000085.1	Protein Homology	CDS	21878	22384	.	-	0	ID=cds-MBO1929849.1;Parent=gene-J4731_22715;Dbxref=NCBI_GP:MBO1929849.1;Name=MBO1929849.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012786.1;locus_tag=J4731_22715;product=fimbria/pilus outer membrane usher protein;protein_id=MBO1929849.1;transl_table=11
JAGETS010000085.1	Genbank	gene	22404	22991	.	-	.	ID=gene-J4731_22720;Name=J4731_22720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_22720
JAGETS010000085.1	Protein Homology	CDS	22404	22991	.	-	0	ID=cds-MBO1929850.1;Parent=gene-J4731_22720;Dbxref=NCBI_GP:MBO1929850.1;Name=MBO1929850.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012786.1;locus_tag=J4731_22720;product=fimbrial biogenesis outer membrane usher protein;protein_id=MBO1929850.1;transl_table=11
JAGETS010000085.1	Genbank	gene	23037	23186	.	-	.	ID=gene-J4731_22725;Name=J4731_22725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_22725
JAGETS010000085.1	Protein Homology	CDS	23037	23186	.	-	0	ID=cds-MBO1929851.1;Parent=gene-J4731_22725;Dbxref=NCBI_GP:MBO1929851.1;Name=MBO1929851.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012786.1;locus_tag=J4731_22725;product=hypothetical protein;protein_id=MBO1929851.1;transl_table=11
JAGETS010000085.1	Genbank	gene	23150	23521	.	-	.	ID=gene-J4731_22730;Name=J4731_22730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_22730
JAGETS010000085.1	Protein Homology	CDS	23150	23521	.	-	0	ID=cds-MBO1929852.1;Parent=gene-J4731_22730;Dbxref=NCBI_GP:MBO1929852.1;Name=MBO1929852.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012786.1;locus_tag=J4731_22730;product=fimbria/pilus outer membrane usher protein;protein_id=MBO1929852.1;transl_table=11
JAGETS010000085.1	Genbank	gene	23542	23871	.	-	.	ID=gene-J4731_22735;Name=J4731_22735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_22735
JAGETS010000085.1	Protein Homology	CDS	23542	23871	.	-	0	ID=cds-MBO1929853.1;Parent=gene-J4731_22735;Dbxref=NCBI_GP:MBO1929853.1;Name=MBO1929853.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025320.1;locus_tag=J4731_22735;product=hypothetical protein;protein_id=MBO1929853.1;transl_table=11
JAGETS010000085.1	Genbank	gene	23912	24019	.	-	.	ID=gene-J4731_22740;Name=J4731_22740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_22740
JAGETS010000085.1	Protein Homology	CDS	23912	24019	.	-	0	ID=cds-MBO1929854.1;Parent=gene-J4731_22740;Dbxref=NCBI_GP:MBO1929854.1;Name=MBO1929854.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025320.1;locus_tag=J4731_22740;product=hypothetical protein;protein_id=MBO1929854.1;transl_table=11
JAGETS010000085.1	Genbank	pseudogene	24251	24916	.	-	.	ID=gene-J4731_22745;Name=J4731_22745;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_22745;pseudo=true
JAGETS010000085.1	Protein Homology	CDS	24251	24916	.	-	0	ID=cds-J4731_22745;Parent=gene-J4731_22745;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000798750.1;locus_tag=J4731_22745;product=fimbria/pilus periplasmic chaperone;pseudo=true;transl_table=11
JAGETS010000085.1	Genbank	gene	25022	25168	.	-	.	ID=gene-J4731_22750;Name=J4731_22750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_22750
JAGETS010000085.1	GeneMarkS-2+	CDS	25022	25168	.	-	0	ID=cds-MBO1929855.1;Parent=gene-J4731_22750;Dbxref=NCBI_GP:MBO1929855.1;Name=MBO1929855.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_22750;product=hypothetical protein;protein_id=MBO1929855.1;transl_table=11
JAGETS010000085.1	Genbank	pseudogene	26109	26724	.	+	.	ID=gene-J4731_22755;Name=J4731_22755;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_22755;pseudo=true
JAGETS010000085.1	Protein Homology	CDS	26109	26724	.	+	0	ID=cds-J4731_22755;Parent=gene-J4731_22755;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015874372.1;locus_tag=J4731_22755;product=response regulator;pseudo=true;transl_table=11
JAGETS010000085.1	Genbank	gene	26904	27479	.	+	.	ID=gene-J4731_22760;Name=J4731_22760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_22760
JAGETS010000085.1	Protein Homology	CDS	26904	27479	.	+	0	ID=cds-MBO1929856.1;Parent=gene-J4731_22760;Dbxref=NCBI_GP:MBO1929856.1;Name=MBO1929856.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012707.1;locus_tag=J4731_22760;product=transporter substrate-binding domain-containing protein;protein_id=MBO1929856.1;transl_table=11
JAGETS010000085.1	Genbank	gene	27998	28561	.	+	.	ID=gene-J4731_22765;Name=J4731_22765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_22765
JAGETS010000085.1	Protein Homology	CDS	27998	28561	.	+	0	ID=cds-MBO1929857.1;Parent=gene-J4731_22765;Dbxref=NCBI_GP:MBO1929857.1;Name=MBO1929857.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012707.1;locus_tag=J4731_22765;product=transporter substrate-binding domain-containing protein;protein_id=MBO1929857.1;transl_table=11
JAGETS010000085.1	Genbank	gene	28702	28866	.	+	.	ID=gene-J4731_22770;Name=J4731_22770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_22770
JAGETS010000085.1	GeneMarkS-2+	CDS	28702	28866	.	+	0	ID=cds-MBO1929858.1;Parent=gene-J4731_22770;Dbxref=NCBI_GP:MBO1929858.1;Name=MBO1929858.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_22770;product=hypothetical protein;protein_id=MBO1929858.1;transl_table=11
JAGETS010000085.1	Genbank	gene	28863	29288	.	+	.	ID=gene-J4731_22775;Name=J4731_22775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_22775
JAGETS010000085.1	Protein Homology	CDS	28863	29288	.	+	0	ID=cds-MBO1929859.1;Parent=gene-J4731_22775;Dbxref=NCBI_GP:MBO1929859.1;Name=MBO1929859.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012722.1;locus_tag=J4731_22775;product=hypothetical protein;protein_id=MBO1929859.1;transl_table=11
JAGETS010000085.1	Genbank	gene	29352	29570	.	+	.	ID=gene-J4731_22780;Name=J4731_22780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_22780
JAGETS010000085.1	Protein Homology	CDS	29352	29570	.	+	0	ID=cds-MBO1929860.1;Parent=gene-J4731_22780;Dbxref=NCBI_GP:MBO1929860.1;Name=MBO1929860.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014567.1;locus_tag=J4731_22780;product=hypothetical protein;protein_id=MBO1929860.1;transl_table=11
JAGETS010000085.1	Genbank	gene	29735	30187	.	+	.	ID=gene-J4731_22785;Name=J4731_22785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_22785
JAGETS010000085.1	Protein Homology	CDS	29735	30187	.	+	0	ID=cds-MBO1929861.1;Parent=gene-J4731_22785;Dbxref=NCBI_GP:MBO1929861.1;Name=MBO1929861.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012301.1%2CHMM:NF013767.1;locus_tag=J4731_22785;product=response regulator;protein_id=MBO1929861.1;transl_table=11
JAGETS010000085.1	Genbank	gene	30408	30887	.	-	.	ID=gene-J4731_22790;Name=J4731_22790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_22790
JAGETS010000085.1	Protein Homology	CDS	30408	30887	.	-	0	ID=cds-MBO1929862.1;Parent=gene-J4731_22790;Dbxref=NCBI_GP:MBO1929862.1;Name=MBO1929862.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001549888.1;locus_tag=J4731_22790;product=arsenate reductase (glutaredoxin);protein_id=MBO1929862.1;transl_table=11
JAGETS010000085.1	Genbank	pseudogene	30898	32172	.	-	.	ID=gene-J4731_22795;Name=J4731_22795;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_22795;pseudo=true
JAGETS010000085.1	Protein Homology	CDS	30898	32172	.	-	0	ID=cds-J4731_22795;Parent=gene-J4731_22795;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014839482.1;locus_tag=J4731_22795;product=arsenic transporter;pseudo=true;transl_table=11
JAGETS010000085.1	Genbank	gene	32300	32632	.	-	.	ID=gene-J4731_22800;Name=J4731_22800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_22800
JAGETS010000085.1	Protein Homology	CDS	32300	32632	.	-	0	ID=cds-MBO1929863.1;Parent=gene-J4731_22800;Dbxref=NCBI_GP:MBO1929863.1;Name=MBO1929863.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012368267.1;locus_tag=J4731_22800;product=metalloregulator ArsR/SmtB family transcription factor;protein_id=MBO1929863.1;transl_table=11
JAGETS010000085.1	Genbank	gene	33104	33628	.	-	.	ID=gene-J4731_22805;Name=J4731_22805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_22805
JAGETS010000085.1	Protein Homology	CDS	33104	33628	.	-	0	ID=cds-MBO1929864.1;Parent=gene-J4731_22805;Dbxref=NCBI_GP:MBO1929864.1;Name=MBO1929864.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004262438.1;locus_tag=J4731_22805;product=GNAT family N-acetyltransferase;protein_id=MBO1929864.1;transl_table=11
JAGETS010000085.1	Genbank	pseudogene	34602	35087	.	+	.	ID=gene-J4731_22810;Name=J4731_22810;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_22810;pseudo=true
JAGETS010000085.1	Protein Homology	CDS	34602	35087	.	+	0	ID=cds-J4731_22810;Parent=gene-J4731_22810;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004262441.1;locus_tag=J4731_22810;product=isochorismatase family protein;pseudo=true;transl_table=11
JAGETS010000085.1	Genbank	pseudogene	36046	36297	.	+	.	ID=gene-J4731_22815;Name=J4731_22815;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_22815;pseudo=true
JAGETS010000085.1	Protein Homology	CDS	36046	36297	.	+	0	ID=cds-J4731_22815;Parent=gene-J4731_22815;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004095538.1;locus_tag=J4731_22815;product=tyrosine-type recombinase/integrase;pseudo=true;transl_table=11
JAGETS010000085.1	Genbank	gene	36319	36395	.	-	.	ID=gene-J4731_22820;Name=J4731_22820;gbkey=Gene;gene_biotype=tRNA;locus_tag=J4731_22820
JAGETS010000085.1	tRNAscan-SE	tRNA	36319	36395	.	-	.	ID=rna-J4731_22820;Parent=gene-J4731_22820;anticodon=(pos:complement(36359..36361));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=J4731_22820;product=tRNA-Arg
JAGETS010000085.1	tRNAscan-SE	exon	36319	36395	.	-	.	ID=exon-J4731_22820-1;Parent=rna-J4731_22820;anticodon=(pos:complement(36359..36361));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=J4731_22820;product=tRNA-Arg
JAGETS010000085.1	Genbank	pseudogene	36592	37431	.	+	.	ID=gene-J4731_22825;Name=folD;gbkey=Gene;gene=folD;gene_biotype=pseudogene;locus_tag=J4731_22825;pseudo=true
JAGETS010000085.1	Protein Homology	CDS	36592	37431	.	+	0	ID=cds-J4731_22825;Parent=gene-J4731_22825;Note=frameshifted;gbkey=CDS;gene=folD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005158281.1;locus_tag=J4731_22825;product=bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD;pseudo=true;transl_table=11
JAGETS010000085.1	Genbank	pseudogene	37450	37658	.	+	.	ID=gene-J4731_22830;Name=ybcJ;gbkey=Gene;gene=ybcJ;gene_biotype=pseudogene;locus_tag=J4731_22830;pseudo=true
JAGETS010000085.1	Protein Homology	CDS	37450	37658	.	+	0	ID=cds-J4731_22830;Parent=gene-J4731_22830;Note=frameshifted;gbkey=CDS;gene=ybcJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004237674.1;locus_tag=J4731_22830;product=ribosome-associated protein YbcJ;pseudo=true;transl_table=11
JAGETS010000085.1	Genbank	pseudogene	38105	39248	.	+	.	ID=gene-J4731_22835;Name=fruB;gbkey=Gene;gene=fruB;gene_biotype=pseudogene;locus_tag=J4731_22835;pseudo=true
JAGETS010000085.1	Protein Homology	CDS	38105	39248	.	+	0	ID=cds-J4731_22835;Parent=gene-J4731_22835;Note=frameshifted%3B internal stop;gbkey=CDS;gene=fruB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004260242.1;locus_tag=J4731_22835;product=fused PTS fructose transporter subunit IIA/HPr protein;pseudo=true;transl_table=11
JAGETS010000085.1	Genbank	pseudogene	39245	40146	.	+	.	ID=gene-J4731_22840;Name=fruK;gbkey=Gene;gene=fruK;gene_biotype=pseudogene;locus_tag=J4731_22840;pseudo=true
JAGETS010000085.1	Protein Homology	CDS	39245	40146	.	+	0	ID=cds-J4731_22840;Parent=gene-J4731_22840;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;gene=fruK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013358523.1;locus_tag=J4731_22840;product=1-phosphofructokinase;pseudo=true;transl_table=11
##sequence-region JAGETS010000086.1 1 30711
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=587
JAGETS010000086.1	Genbank	region	1	30711	.	+	.	ID=JAGETS010000086.1:1..30711;Dbxref=taxon:587;collected-by=NHLS;collection-date=2018;country=South Africa: Pretoria;gbkey=Src;isolation-source=stool;lat-lon=25.7479 S 28.2293 E;mol_type=genomic DNA;nat-host=porcine;strain=SG003
JAGETS010000086.1	Genbank	pseudogene	1	555	.	-	.	ID=gene-J4731_22845;Name=J4731_22845;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_22845;pseudo=true
JAGETS010000086.1	Protein Homology	CDS	1	555	.	-	0	ID=cds-J4731_22845;Parent=gene-J4731_22845;Note=frameshifted%3B internal stop%3B incomplete%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006657578.1;locus_tag=J4731_22845;product=fructose-bisphosphatase class II;pseudo=true;transl_table=11
JAGETS010000086.1	Genbank	pseudogene	711	1624	.	-	.	ID=gene-J4731_22850;Name=J4731_22850;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_22850;pseudo=true
JAGETS010000086.1	Protein Homology	CDS	711	1624	.	-	0	ID=cds-J4731_22850;Parent=gene-J4731_22850;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006813345.1;locus_tag=J4731_22850;product=AEC family transporter;pseudo=true;transl_table=11
JAGETS010000086.1	Genbank	gene	2253	2468	.	+	.	ID=gene-J4731_22855;Name=J4731_22855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_22855
JAGETS010000086.1	GeneMarkS-2+	CDS	2253	2468	.	+	0	ID=cds-MBO1929865.1;Parent=gene-J4731_22855;Dbxref=NCBI_GP:MBO1929865.1;Name=MBO1929865.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_22855;product=hypothetical protein;protein_id=MBO1929865.1;transl_table=11
JAGETS010000086.1	Genbank	pseudogene	2758	5037	.	+	.	ID=gene-J4731_22860;Name=J4731_22860;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_22860;pseudo=true
JAGETS010000086.1	Protein Homology	CDS	2758	5037	.	+	0	ID=cds-J4731_22860;Parent=gene-J4731_22860;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014658101.1;locus_tag=J4731_22860;product=DUF2339 domain-containing protein;pseudo=true;transl_table=11
JAGETS010000086.1	Genbank	pseudogene	5034	6518	.	+	.	ID=gene-J4731_22865;Name=J4731_22865;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_22865;pseudo=true
JAGETS010000086.1	Protein Homology	CDS	5034	6518	.	+	0	ID=cds-J4731_22865;Parent=gene-J4731_22865;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004918779.1;locus_tag=J4731_22865;product=DUF3999 family protein;pseudo=true;transl_table=11
JAGETS010000086.1	Genbank	gene	6716	6952	.	+	.	ID=gene-J4731_22870;Name=J4731_22870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_22870
JAGETS010000086.1	GeneMarkS-2+	CDS	6716	6952	.	+	0	ID=cds-MBO1929866.1;Parent=gene-J4731_22870;Dbxref=NCBI_GP:MBO1929866.1;Name=MBO1929866.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_22870;product=hypothetical protein;protein_id=MBO1929866.1;transl_table=11
JAGETS010000086.1	Genbank	pseudogene	7026	7435	.	+	.	ID=gene-J4731_22875;Name=J4731_22875;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_22875;pseudo=true
JAGETS010000086.1	Protein Homology	CDS	7026	7435	.	+	0	ID=cds-J4731_22875;Parent=gene-J4731_22875;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004263371.1;locus_tag=J4731_22875;product=GFA family protein;pseudo=true;transl_table=11
JAGETS010000086.1	Genbank	pseudogene	7619	8013	.	+	.	ID=gene-J4731_22880;Name=psiE;gbkey=Gene;gene=psiE;gene_biotype=pseudogene;locus_tag=J4731_22880;pseudo=true
JAGETS010000086.1	Protein Homology	CDS	7619	8013	.	+	0	ID=cds-J4731_22880;Parent=gene-J4731_22880;Note=frameshifted;gbkey=CDS;gene=psiE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004263374.1;locus_tag=J4731_22880;product=phosphate-starvation-inducible protein PsiE;pseudo=true;transl_table=11
JAGETS010000086.1	Genbank	pseudogene	8380	9852	.	+	.	ID=gene-J4731_22885;Name=J4731_22885;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_22885;pseudo=true
JAGETS010000086.1	Protein Homology	CDS	8380	9852	.	+	0	ID=cds-J4731_22885;Parent=gene-J4731_22885;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012104550.1;locus_tag=J4731_22885;product=AbgT family transporter;pseudo=true;transl_table=11
JAGETS010000086.1	Genbank	pseudogene	9911	11162	.	+	.	ID=gene-J4731_22890;Name=pepT;gbkey=Gene;gene=pepT;gene_biotype=pseudogene;locus_tag=J4731_22890;pseudo=true
JAGETS010000086.1	Protein Homology	CDS	9911	11162	.	+	0	ID=cds-J4731_22890;Parent=gene-J4731_22890;Note=frameshifted;gbkey=CDS;gene=pepT;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004918790.1;locus_tag=J4731_22890;product=peptidase T;pseudo=true;transl_table=11
JAGETS010000086.1	Genbank	pseudogene	11330	12010	.	+	.	ID=gene-J4731_22895;Name=J4731_22895;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_22895;pseudo=true
JAGETS010000086.1	Protein Homology	CDS	11330	12010	.	+	0	ID=cds-J4731_22895;Parent=gene-J4731_22895;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004918792.1;locus_tag=J4731_22895;product=DNA-binding response regulator;pseudo=true;transl_table=11
JAGETS010000086.1	Genbank	pseudogene	12043	13797	.	+	.	ID=gene-J4731_22900;Name=uvrC;gbkey=Gene;gene=uvrC;gene_biotype=pseudogene;locus_tag=J4731_22900;pseudo=true
JAGETS010000086.1	Protein Homology	CDS	12043	13797	.	+	0	ID=cds-J4731_22900;Parent=gene-J4731_22900;Note=frameshifted;gbkey=CDS;gene=uvrC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008911607.1;locus_tag=J4731_22900;product=excinuclease ABC subunit UvrC;pseudo=true;transl_table=11
JAGETS010000086.1	Genbank	pseudogene	13855	14402	.	+	.	ID=gene-J4731_22905;Name=pgsA;gbkey=Gene;gene=pgsA;gene_biotype=pseudogene;locus_tag=J4731_22905;pseudo=true
JAGETS010000086.1	Protein Homology	CDS	13855	14402	.	+	0	ID=cds-J4731_22905;Parent=gene-J4731_22905;Note=frameshifted;gbkey=CDS;gene=pgsA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014658106.1;locus_tag=J4731_22905;product=CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase;pseudo=true;transl_table=11
JAGETS010000086.1	Genbank	gene	14567	14640	.	+	.	ID=gene-J4731_22910;Name=J4731_22910;gbkey=Gene;gene_biotype=tRNA;locus_tag=J4731_22910
JAGETS010000086.1	tRNAscan-SE	tRNA	14567	14640	.	+	.	ID=rna-J4731_22910;Parent=gene-J4731_22910;anticodon=(pos:14599..14601);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=J4731_22910;product=tRNA-Gly
JAGETS010000086.1	tRNAscan-SE	exon	14567	14640	.	+	.	ID=exon-J4731_22910-1;Parent=rna-J4731_22910;anticodon=(pos:14599..14601);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=J4731_22910;product=tRNA-Gly
JAGETS010000086.1	Genbank	gene	14664	14733	.	+	.	ID=gene-J4731_22915;Name=J4731_22915;gbkey=Gene;gene_biotype=tRNA;locus_tag=J4731_22915
JAGETS010000086.1	tRNAscan-SE	tRNA	14664	14733	.	+	.	ID=rna-J4731_22915;Parent=gene-J4731_22915;anticodon=(pos:14695..14697);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=J4731_22915;product=tRNA-Cys
JAGETS010000086.1	tRNAscan-SE	exon	14664	14733	.	+	.	ID=exon-J4731_22915-1;Parent=rna-J4731_22915;anticodon=(pos:14695..14697);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=J4731_22915;product=tRNA-Cys
JAGETS010000086.1	Genbank	gene	14743	14827	.	+	.	ID=gene-J4731_22920;Name=J4731_22920;gbkey=Gene;gene_biotype=tRNA;locus_tag=J4731_22920
JAGETS010000086.1	tRNAscan-SE	tRNA	14743	14827	.	+	.	ID=rna-J4731_22920;Parent=gene-J4731_22920;anticodon=(pos:14777..14779);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=J4731_22920;product=tRNA-Leu
JAGETS010000086.1	tRNAscan-SE	exon	14743	14827	.	+	.	ID=exon-J4731_22920-1;Parent=rna-J4731_22920;anticodon=(pos:14777..14779);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=J4731_22920;product=tRNA-Leu
JAGETS010000086.1	Genbank	gene	14954	15041	.	+	.	ID=gene-J4731_22925;Name=J4731_22925;gbkey=Gene;gene_biotype=tRNA;locus_tag=J4731_22925
JAGETS010000086.1	tRNAscan-SE	tRNA	14954	15041	.	+	.	ID=rna-J4731_22925;Parent=gene-J4731_22925;anticodon=(pos:14988..14990);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=J4731_22925;product=tRNA-Leu
JAGETS010000086.1	tRNAscan-SE	exon	14954	15041	.	+	.	ID=exon-J4731_22925-1;Parent=rna-J4731_22925;anticodon=(pos:14988..14990);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=J4731_22925;product=tRNA-Leu
JAGETS010000086.1	Genbank	gene	15308	15460	.	+	.	ID=gene-J4731_22930;Name=J4731_22930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_22930
JAGETS010000086.1	Protein Homology	CDS	15308	15460	.	+	0	ID=cds-MBO1929867.1;Parent=gene-J4731_22930;Dbxref=NCBI_GP:MBO1929867.1;Name=MBO1929867.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006813333.1;locus_tag=J4731_22930;product=MbeCy;protein_id=MBO1929867.1;transl_table=11
JAGETS010000086.1	Genbank	gene	15913	16107	.	+	.	ID=gene-J4731_22935;Name=J4731_22935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_22935
JAGETS010000086.1	GeneMarkS-2+	CDS	15913	16107	.	+	0	ID=cds-MBO1929868.1;Parent=gene-J4731_22935;Dbxref=NCBI_GP:MBO1929868.1;Name=MBO1929868.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_22935;product=hypothetical protein;protein_id=MBO1929868.1;transl_table=11
JAGETS010000086.1	Genbank	gene	16310	16456	.	+	.	ID=gene-J4731_22940;Name=J4731_22940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_22940
JAGETS010000086.1	GeneMarkS-2+	CDS	16310	16456	.	+	0	ID=cds-MBO1929869.1;Parent=gene-J4731_22940;Dbxref=NCBI_GP:MBO1929869.1;Name=MBO1929869.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_22940;product=hypothetical protein;protein_id=MBO1929869.1;transl_table=11
JAGETS010000086.1	Genbank	pseudogene	16580	17754	.	+	.	ID=gene-J4731_22945;Name=J4731_22945;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_22945;pseudo=true
JAGETS010000086.1	Protein Homology	CDS	16580	17754	.	+	0	ID=cds-J4731_22945;Parent=gene-J4731_22945;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006316718.1;locus_tag=J4731_22945;product=trans-2-enoyl-CoA reductase family protein;pseudo=true;transl_table=11
JAGETS010000086.1	Genbank	pseudogene	18635	19836	.	+	.	ID=gene-J4731_22950;Name=J4731_22950;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_22950;pseudo=true
JAGETS010000086.1	Protein Homology	CDS	18635	19836	.	+	0	ID=cds-J4731_22950;Parent=gene-J4731_22950;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004263428.1;locus_tag=J4731_22950;product=nicotinamide mononucleotide deamidase-related protein YfaY;pseudo=true;transl_table=11
JAGETS010000086.1	Genbank	gene	19843	20526	.	+	.	ID=gene-J4731_22955;Name=J4731_22955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_22955
JAGETS010000086.1	Protein Homology	CDS	19843	20526	.	+	0	ID=cds-MBO1929870.1;Parent=gene-J4731_22955;Dbxref=NCBI_GP:MBO1929870.1;Name=MBO1929870.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014021.1;locus_tag=J4731_22955;product=nucleotidyltransferase domain-containing protein;protein_id=MBO1929870.1;transl_table=11
JAGETS010000086.1	Genbank	pseudogene	21179	21602	.	-	.	ID=gene-J4731_22960;Name=J4731_22960;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_22960;pseudo=true
JAGETS010000086.1	Protein Homology	CDS	21179	21602	.	-	0	ID=cds-J4731_22960;Parent=gene-J4731_22960;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008911586.1;locus_tag=J4731_22960;product=universal stress protein;pseudo=true;transl_table=11
JAGETS010000086.1	Genbank	gene	21926	22111	.	+	.	ID=gene-J4731_22965;Name=J4731_22965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_22965
JAGETS010000086.1	Protein Homology	CDS	21926	22111	.	+	0	ID=cds-MBO1929871.1;Parent=gene-J4731_22965;Dbxref=NCBI_GP:MBO1929871.1;Name=MBO1929871.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004242542.1;locus_tag=J4731_22965;product=ParD-like family protein;protein_id=MBO1929871.1;transl_table=11
JAGETS010000086.1	Genbank	pseudogene	22124	22888	.	+	.	ID=gene-J4731_22970;Name=map;gbkey=Gene;gene=map;gene_biotype=pseudogene;locus_tag=J4731_22970;pseudo=true
JAGETS010000086.1	Protein Homology	CDS	22124	22888	.	+	0	ID=cds-J4731_22970;Parent=gene-J4731_22970;Note=frameshifted;gbkey=CDS;gene=map;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004918978.1;locus_tag=J4731_22970;product=type I methionyl aminopeptidase;pseudo=true;transl_table=11
JAGETS010000086.1	Genbank	pseudogene	22953	23382	.	-	.	ID=gene-J4731_22975;Name=J4731_22975;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_22975;pseudo=true
JAGETS010000086.1	Protein Homology	CDS	22953	23382	.	-	0	ID=cds-J4731_22975;Parent=gene-J4731_22975;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004263450.1;locus_tag=J4731_22975;product=carboxymuconolactone decarboxylase family protein;pseudo=true;transl_table=11
JAGETS010000086.1	Genbank	pseudogene	23489	24264	.	-	.	ID=gene-J4731_22980;Name=J4731_22980;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_22980;pseudo=true
JAGETS010000086.1	Protein Homology	CDS	23489	24264	.	-	0	ID=cds-J4731_22980;Parent=gene-J4731_22980;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000679500.1;locus_tag=J4731_22980;product=DeoR/GlpR transcriptional regulator;pseudo=true;transl_table=11
JAGETS010000086.1	Genbank	pseudogene	24268	25220	.	-	.	ID=gene-J4731_22985;Name=J4731_22985;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_22985;pseudo=true
JAGETS010000086.1	Protein Homology	CDS	24268	25220	.	-	0	ID=cds-J4731_22985;Parent=gene-J4731_22985;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459168.1;locus_tag=J4731_22985;product=D-threonate 4-phosphate dehydrogenase;pseudo=true;transl_table=11
JAGETS010000086.1	Genbank	pseudogene	25290	26486	.	-	.	ID=gene-J4731_22990;Name=J4731_22990;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_22990;pseudo=true
JAGETS010000086.1	Protein Homology	CDS	25290	26486	.	-	0	ID=cds-J4731_22990;Parent=gene-J4731_22990;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000782192.1;locus_tag=J4731_22990;product=four-carbon acid sugar kinase family protein;pseudo=true;transl_table=11
JAGETS010000086.1	Genbank	pseudogene	26497	27407	.	-	.	ID=gene-J4731_22995;Name=J4731_22995;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_22995;pseudo=true
JAGETS010000086.1	Protein Homology	CDS	26497	27407	.	-	0	ID=cds-J4731_22995;Parent=gene-J4731_22995;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017374045.1;locus_tag=J4731_22995;product=2-keto-3-deoxygluconate permease 1;pseudo=true;transl_table=11
JAGETS010000086.1	Genbank	pseudogene	27873	28813	.	+	.	ID=gene-J4731_23000;Name=J4731_23000;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_23000;pseudo=true
JAGETS010000086.1	Protein Homology	CDS	27873	28813	.	+	0	ID=cds-J4731_23000;Parent=gene-J4731_23000;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004263460.1;locus_tag=J4731_23000;product=hypothetical protein;pseudo=true;transl_table=11
JAGETS010000086.1	Genbank	pseudogene	29164	29960	.	+	.	ID=gene-J4731_23005;Name=J4731_23005;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_23005;pseudo=true
JAGETS010000086.1	Protein Homology	CDS	29164	29960	.	+	0	ID=cds-J4731_23005;Parent=gene-J4731_23005;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006661997.1;locus_tag=J4731_23005;product=dimethyl sulfoxide reductase anchor subunit;pseudo=true;transl_table=11
JAGETS010000086.1	Genbank	pseudogene	29970	30480	.	-	.	ID=gene-J4731_23010;Name=J4731_23010;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_23010;pseudo=true
JAGETS010000086.1	Protein Homology	CDS	29970	30480	.	-	0	ID=cds-J4731_23010;Parent=gene-J4731_23010;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001367246.1;locus_tag=J4731_23010;product=PTS ascorbate transporter subunit IIC;pseudo=true;transl_table=11
##sequence-region JAGETS010000087.1 1 39776
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=587
JAGETS010000087.1	Genbank	region	1	39776	.	+	.	ID=JAGETS010000087.1:1..39776;Dbxref=taxon:587;collected-by=NHLS;collection-date=2018;country=South Africa: Pretoria;gbkey=Src;isolation-source=stool;lat-lon=25.7479 S 28.2293 E;mol_type=genomic DNA;nat-host=porcine;strain=SG003
JAGETS010000087.1	Genbank	pseudogene	148	548	.	-	.	ID=gene-J4731_23015;Name=J4731_23015;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_23015;pseudo=true
JAGETS010000087.1	Protein Homology	CDS	148	548	.	-	0	ID=cds-J4731_23015;Parent=gene-J4731_23015;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004254501.1;locus_tag=J4731_23015;product=DUF1456 family protein;pseudo=true;transl_table=11
JAGETS010000087.1	Genbank	pseudogene	790	1093	.	-	.	ID=gene-J4731_23020;Name=J4731_23020;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_23020;pseudo=true
JAGETS010000087.1	Protein Homology	CDS	790	1093	.	-	0	ID=cds-J4731_23020;Parent=gene-J4731_23020;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004254498.1;locus_tag=J4731_23020;product=AzlD domain-containing protein;pseudo=true;transl_table=11
JAGETS010000087.1	Genbank	pseudogene	1090	1782	.	-	.	ID=gene-J4731_23025;Name=J4731_23025;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_23025;pseudo=true
JAGETS010000087.1	Protein Homology	CDS	1090	1782	.	-	0	ID=cds-J4731_23025;Parent=gene-J4731_23025;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008911264.1;locus_tag=J4731_23025;product=AzlC family ABC transporter permease;pseudo=true;transl_table=11
JAGETS010000087.1	Genbank	pseudogene	2248	2880	.	+	.	ID=gene-J4731_23030;Name=leuE;gbkey=Gene;gene=leuE;gene_biotype=pseudogene;locus_tag=J4731_23030;pseudo=true
JAGETS010000087.1	Protein Homology	CDS	2248	2880	.	+	0	ID=cds-J4731_23030;Parent=gene-J4731_23030;Note=frameshifted%3B internal stop;gbkey=CDS;gene=leuE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004254492.1;locus_tag=J4731_23030;product=leucine efflux protein LeuE;pseudo=true;transl_table=11
JAGETS010000087.1	Genbank	pseudogene	3223	3695	.	+	.	ID=gene-J4731_23035;Name=J4731_23035;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_23035;pseudo=true
JAGETS010000087.1	Protein Homology	CDS	3223	3695	.	+	0	ID=cds-J4731_23035;Parent=gene-J4731_23035;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014658343.1;locus_tag=J4731_23035;product=NUDIX domain-containing protein;pseudo=true;transl_table=11
JAGETS010000087.1	Genbank	pseudogene	4474	5352	.	+	.	ID=gene-J4731_23040;Name=J4731_23040;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_23040;pseudo=true
JAGETS010000087.1	Protein Homology	CDS	4474	5352	.	+	0	ID=cds-J4731_23040;Parent=gene-J4731_23040;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004254481.1;locus_tag=J4731_23040;product=LysR family transcriptional regulator;pseudo=true;transl_table=11
JAGETS010000087.1	Genbank	pseudogene	5482	6571	.	+	.	ID=gene-J4731_23045;Name=ddlA;gbkey=Gene;gene=ddlA;gene_biotype=pseudogene;locus_tag=J4731_23045;pseudo=true
JAGETS010000087.1	Protein Homology	CDS	5482	6571	.	+	0	ID=cds-J4731_23045;Parent=gene-J4731_23045;Note=frameshifted;gbkey=CDS;gene=ddlA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006812999.1;locus_tag=J4731_23045;product=D-alanine--D-alanine ligase;pseudo=true;transl_table=11
JAGETS010000087.1	Genbank	pseudogene	6640	7159	.	-	.	ID=gene-J4731_23050;Name=J4731_23050;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_23050;pseudo=true
JAGETS010000087.1	Protein Homology	CDS	6640	7159	.	-	0	ID=cds-J4731_23050;Parent=gene-J4731_23050;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014658346.1;locus_tag=J4731_23050;product=adenylate kinase;pseudo=true;transl_table=11
JAGETS010000087.1	Genbank	pseudogene	7277	8046	.	-	.	ID=gene-J4731_23055;Name=J4731_23055;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_23055;pseudo=true
JAGETS010000087.1	Protein Homology	CDS	7277	8046	.	-	0	ID=cds-J4731_23055;Parent=gene-J4731_23055;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008911256.1;locus_tag=J4731_23055;product=GNAT family N-acetyltransferase;pseudo=true;transl_table=11
JAGETS010000087.1	Genbank	pseudogene	8050	8222	.	-	.	ID=gene-J4731_23060;Name=J4731_23060;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_23060;pseudo=true
JAGETS010000087.1	Protein Homology	CDS	8050	8222	.	-	0	ID=cds-J4731_23060;Parent=gene-J4731_23060;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014658347.1;locus_tag=J4731_23060;product=FAD-binding oxidoreductase;pseudo=true;transl_table=11
JAGETS010000087.1	Genbank	gene	8330	8665	.	-	.	ID=gene-J4731_23065;Name=J4731_23065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_23065
JAGETS010000087.1	GeneMarkS-2+	CDS	8330	8665	.	-	0	ID=cds-MBO1929872.1;Parent=gene-J4731_23065;Dbxref=NCBI_GP:MBO1929872.1;Name=MBO1929872.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_23065;product=hypothetical protein;protein_id=MBO1929872.1;transl_table=11
JAGETS010000087.1	Genbank	gene	9018	9398	.	-	.	ID=gene-J4731_23070;Name=J4731_23070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_23070
JAGETS010000087.1	GeneMarkS-2+	CDS	9018	9398	.	-	0	ID=cds-MBO1929873.1;Parent=gene-J4731_23070;Dbxref=NCBI_GP:MBO1929873.1;Name=MBO1929873.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_23070;product=hypothetical protein;protein_id=MBO1929873.1;transl_table=11
JAGETS010000087.1	Genbank	pseudogene	9578	9856	.	-	.	ID=gene-J4731_23075;Name=J4731_23075;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_23075;pseudo=true
JAGETS010000087.1	Protein Homology	CDS	9578	9856	.	-	0	ID=cds-J4731_23075;Parent=gene-J4731_23075;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004235301.1;locus_tag=J4731_23075;product=hypothetical protein;pseudo=true;transl_table=11
JAGETS010000087.1	Genbank	pseudogene	9986	10905	.	+	.	ID=gene-J4731_23080;Name=J4731_23080;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_23080;pseudo=true
JAGETS010000087.1	Protein Homology	CDS	9986	10905	.	+	0	ID=cds-J4731_23080;Parent=gene-J4731_23080;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004254440.1;locus_tag=J4731_23080;product=alpha/beta hydrolase;pseudo=true;transl_table=11
JAGETS010000087.1	Genbank	pseudogene	11046	11820	.	-	.	ID=gene-J4731_23085;Name=J4731_23085;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_23085;pseudo=true
JAGETS010000087.1	Protein Homology	CDS	11046	11820	.	-	0	ID=cds-J4731_23085;Parent=gene-J4731_23085;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004254436.1;locus_tag=J4731_23085;product=GNAT family N-acetyltransferase;pseudo=true;transl_table=11
JAGETS010000087.1	Genbank	pseudogene	12004	12330	.	+	.	ID=gene-J4731_23090;Name=J4731_23090;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_23090;pseudo=true
JAGETS010000087.1	Protein Homology	CDS	12004	12330	.	+	0	ID=cds-J4731_23090;Parent=gene-J4731_23090;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004919784.1;locus_tag=J4731_23090;product=ASCH domain-containing protein;pseudo=true;transl_table=11
JAGETS010000087.1	Genbank	pseudogene	12413	13375	.	-	.	ID=gene-J4731_23095;Name=J4731_23095;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_23095;pseudo=true
JAGETS010000087.1	Protein Homology	CDS	12413	13375	.	-	0	ID=cds-J4731_23095;Parent=gene-J4731_23095;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006661756.1;locus_tag=J4731_23095;product=D-cysteine desulfhydrase family protein;pseudo=true;transl_table=11
JAGETS010000087.1	Genbank	pseudogene	13391	14795	.	-	.	ID=gene-J4731_23100;Name=J4731_23100;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_23100;pseudo=true
JAGETS010000087.1	Protein Homology	CDS	13391	14795	.	-	0	ID=cds-J4731_23100;Parent=gene-J4731_23100;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015585340.1;locus_tag=J4731_23100;product=sodium:proton antiporter;pseudo=true;transl_table=11
JAGETS010000087.1	Genbank	pseudogene	14971	15504	.	-	.	ID=gene-J4731_23105;Name=J4731_23105;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_23105;pseudo=true
JAGETS010000087.1	Protein Homology	CDS	14971	15504	.	-	0	ID=cds-J4731_23105;Parent=gene-J4731_23105;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004254423.1;locus_tag=J4731_23105;product=GNAT family N-acetyltransferase;pseudo=true;transl_table=11
JAGETS010000087.1	Genbank	gene	15719	16003	.	+	.	ID=gene-J4731_23110;Name=J4731_23110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_23110
JAGETS010000087.1	GeneMarkS-2+	CDS	15719	16003	.	+	0	ID=cds-MBO1929874.1;Parent=gene-J4731_23110;Dbxref=NCBI_GP:MBO1929874.1;Name=MBO1929874.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_23110;product=hypothetical protein;protein_id=MBO1929874.1;transl_table=11
JAGETS010000087.1	Genbank	gene	16318	16530	.	+	.	ID=gene-J4731_23115;Name=J4731_23115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_23115
JAGETS010000087.1	Protein Homology	CDS	16318	16530	.	+	0	ID=cds-MBO1929875.1;Parent=gene-J4731_23115;Dbxref=NCBI_GP:MBO1929875.1;Name=MBO1929875.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024242.1;locus_tag=J4731_23115;product=AraC family transcriptional regulator;protein_id=MBO1929875.1;transl_table=11
JAGETS010000087.1	Genbank	pseudogene	16679	17751	.	+	.	ID=gene-J4731_23120;Name=ada;gbkey=Gene;gene=ada;gene_biotype=pseudogene;locus_tag=J4731_23120;pseudo=true
JAGETS010000087.1	Protein Homology	CDS	16679	17751	.	+	0	ID=cds-J4731_23120;Parent=gene-J4731_23120;Note=frameshifted;gbkey=CDS;gene=ada;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006659833.1;locus_tag=J4731_23120;product=bifunctional DNA-binding transcriptional regulator/O6-methylguanine-DNA methyltransferase Ada;pseudo=true;transl_table=11
JAGETS010000087.1	Genbank	pseudogene	17861	19048	.	-	.	ID=gene-J4731_23125;Name=J4731_23125;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_23125;pseudo=true
JAGETS010000087.1	Protein Homology	CDS	17861	19048	.	-	0	ID=cds-J4731_23125;Parent=gene-J4731_23125;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004915912.1;locus_tag=J4731_23125;product=MFS transporter;pseudo=true;transl_table=11
JAGETS010000087.1	Genbank	gene	19589	19873	.	+	.	ID=gene-J4731_23130;Name=J4731_23130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_23130
JAGETS010000087.1	GeneMarkS-2+	CDS	19589	19873	.	+	0	ID=cds-MBO1929876.1;Parent=gene-J4731_23130;Dbxref=NCBI_GP:MBO1929876.1;Name=MBO1929876.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_23130;product=hypothetical protein;protein_id=MBO1929876.1;transl_table=11
JAGETS010000087.1	Genbank	gene	20018	20212	.	+	.	ID=gene-J4731_23135;Name=J4731_23135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_23135
JAGETS010000087.1	Protein Homology	CDS	20018	20212	.	+	0	ID=cds-MBO1929877.1;Parent=gene-J4731_23135;Dbxref=NCBI_GP:MBO1929877.1;Name=MBO1929877.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019310.1;locus_tag=J4731_23135;product=MFS transporter;protein_id=MBO1929877.1;transl_table=11
JAGETS010000087.1	Genbank	gene	20119	20613	.	+	.	ID=gene-J4731_23140;Name=J4731_23140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_23140
JAGETS010000087.1	GeneMarkS-2+	CDS	20119	20613	.	+	0	ID=cds-MBO1929878.1;Parent=gene-J4731_23140;Dbxref=NCBI_GP:MBO1929878.1;Name=MBO1929878.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_23140;product=hypothetical protein;protein_id=MBO1929878.1;transl_table=11
JAGETS010000087.1	Genbank	pseudogene	20809	21981	.	-	.	ID=gene-J4731_23145;Name=J4731_23145;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_23145;pseudo=true
JAGETS010000087.1	Protein Homology	CDS	20809	21981	.	-	0	ID=cds-J4731_23145;Parent=gene-J4731_23145;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014658366.1;locus_tag=J4731_23145;product=MFS transporter;pseudo=true;transl_table=11
JAGETS010000087.1	Genbank	pseudogene	22280	23432	.	-	.	ID=gene-J4731_23150;Name=J4731_23150;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_23150;pseudo=true
JAGETS010000087.1	Protein Homology	CDS	22280	23432	.	-	0	ID=cds-J4731_23150;Parent=gene-J4731_23150;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006661750.1;locus_tag=J4731_23150;product=iron-containing alcohol dehydrogenase;pseudo=true;transl_table=11
JAGETS010000087.1	Genbank	gene	23923	24231	.	+	.	ID=gene-J4731_23155;Name=J4731_23155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_23155
JAGETS010000087.1	Protein Homology	CDS	23923	24231	.	+	0	ID=cds-MBO1929879.1;Parent=gene-J4731_23155;Dbxref=NCBI_GP:MBO1929879.1;Name=MBO1929879.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF023141.1;locus_tag=J4731_23155;product=hypothetical protein;protein_id=MBO1929879.1;transl_table=11
JAGETS010000087.1	Genbank	gene	24351	24569	.	+	.	ID=gene-J4731_23160;Name=J4731_23160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_23160
JAGETS010000087.1	GeneMarkS-2+	CDS	24351	24569	.	+	0	ID=cds-MBO1929880.1;Parent=gene-J4731_23160;Dbxref=NCBI_GP:MBO1929880.1;Name=MBO1929880.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_23160;product=hypothetical protein;protein_id=MBO1929880.1;transl_table=11
JAGETS010000087.1	Genbank	gene	24577	24825	.	+	.	ID=gene-J4731_23165;Name=J4731_23165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_23165
JAGETS010000087.1	GeneMarkS-2+	CDS	24577	24825	.	+	0	ID=cds-MBO1929881.1;Parent=gene-J4731_23165;Dbxref=NCBI_GP:MBO1929881.1;Name=MBO1929881.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_23165;product=hypothetical protein;protein_id=MBO1929881.1;transl_table=11
JAGETS010000087.1	Genbank	gene	26151	26363	.	+	.	ID=gene-J4731_23170;Name=J4731_23170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_23170
JAGETS010000087.1	GeneMarkS-2+	CDS	26151	26363	.	+	0	ID=cds-MBO1929882.1;Parent=gene-J4731_23170;Dbxref=NCBI_GP:MBO1929882.1;Name=MBO1929882.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_23170;product=hypothetical protein;protein_id=MBO1929882.1;transl_table=11
JAGETS010000087.1	Genbank	gene	26405	26578	.	+	.	ID=gene-J4731_23175;Name=J4731_23175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_23175
JAGETS010000087.1	GeneMarkS-2+	CDS	26405	26578	.	+	0	ID=cds-MBO1929883.1;Parent=gene-J4731_23175;Dbxref=NCBI_GP:MBO1929883.1;Name=MBO1929883.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_23175;product=hypothetical protein;protein_id=MBO1929883.1;transl_table=11
JAGETS010000087.1	Genbank	gene	26742	26903	.	+	.	ID=gene-J4731_23180;Name=J4731_23180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_23180
JAGETS010000087.1	GeneMarkS-2+	CDS	26742	26903	.	+	0	ID=cds-MBO1929884.1;Parent=gene-J4731_23180;Dbxref=NCBI_GP:MBO1929884.1;Name=MBO1929884.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_23180;product=hypothetical protein;protein_id=MBO1929884.1;transl_table=11
JAGETS010000087.1	Genbank	gene	26975	27352	.	+	.	ID=gene-J4731_23185;Name=J4731_23185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_23185
JAGETS010000087.1	GeneMarkS-2+	CDS	26975	27352	.	+	0	ID=cds-MBO1929885.1;Parent=gene-J4731_23185;Dbxref=NCBI_GP:MBO1929885.1;Name=MBO1929885.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_23185;product=hypothetical protein;protein_id=MBO1929885.1;transl_table=11
JAGETS010000087.1	Genbank	gene	27535	28050	.	+	.	ID=gene-J4731_23190;Name=J4731_23190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_23190
JAGETS010000087.1	GeneMarkS-2+	CDS	27535	28050	.	+	0	ID=cds-MBO1929886.1;Parent=gene-J4731_23190;Dbxref=NCBI_GP:MBO1929886.1;Name=MBO1929886.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_23190;product=hypothetical protein;protein_id=MBO1929886.1;transl_table=11
JAGETS010000087.1	Genbank	gene	29328	29471	.	+	.	ID=gene-J4731_23195;Name=J4731_23195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_23195
JAGETS010000087.1	GeneMarkS-2+	CDS	29328	29471	.	+	0	ID=cds-MBO1929887.1;Parent=gene-J4731_23195;Dbxref=NCBI_GP:MBO1929887.1;Name=MBO1929887.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_23195;product=hypothetical protein;protein_id=MBO1929887.1;transl_table=11
JAGETS010000087.1	Genbank	gene	29705	29836	.	+	.	ID=gene-J4731_23200;Name=J4731_23200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_23200
JAGETS010000087.1	Protein Homology	CDS	29705	29836	.	+	0	ID=cds-MBO1929888.1;Parent=gene-J4731_23200;Dbxref=NCBI_GP:MBO1929888.1;Name=MBO1929888.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012573.1;locus_tag=J4731_23200;product=hypothetical protein;protein_id=MBO1929888.1;transl_table=11
JAGETS010000087.1	Genbank	gene	29820	30356	.	+	.	ID=gene-J4731_23205;Name=J4731_23205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_23205
JAGETS010000087.1	GeneMarkS-2+	CDS	29820	30356	.	+	0	ID=cds-MBO1929889.1;Parent=gene-J4731_23205;Dbxref=NCBI_GP:MBO1929889.1;Name=MBO1929889.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_23205;product=hypothetical protein;protein_id=MBO1929889.1;transl_table=11
JAGETS010000087.1	Genbank	gene	30761	30901	.	+	.	ID=gene-J4731_23210;Name=J4731_23210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_23210
JAGETS010000087.1	GeneMarkS-2+	CDS	30761	30901	.	+	0	ID=cds-MBO1929890.1;Parent=gene-J4731_23210;Dbxref=NCBI_GP:MBO1929890.1;Name=MBO1929890.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_23210;product=hypothetical protein;protein_id=MBO1929890.1;transl_table=11
JAGETS010000087.1	Genbank	pseudogene	31094	31965	.	+	.	ID=gene-J4731_23215;Name=J4731_23215;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_23215;pseudo=true
JAGETS010000087.1	Protein Homology	CDS	31094	31965	.	+	0	ID=cds-J4731_23215;Parent=gene-J4731_23215;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004248023.1;locus_tag=J4731_23215;product=4Fe-4S binding protein;pseudo=true;transl_table=11
JAGETS010000087.1	Genbank	gene	32052	32420	.	-	.	ID=gene-J4731_23220;Name=J4731_23220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_23220
JAGETS010000087.1	GeneMarkS-2+	CDS	32052	32420	.	-	0	ID=cds-MBO1929891.1;Parent=gene-J4731_23220;Dbxref=NCBI_GP:MBO1929891.1;Name=MBO1929891.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_23220;product=hypothetical protein;protein_id=MBO1929891.1;transl_table=11
JAGETS010000087.1	Genbank	pseudogene	32425	32602	.	-	.	ID=gene-J4731_23225;Name=J4731_23225;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_23225;pseudo=true
JAGETS010000087.1	Protein Homology	CDS	32425	32602	.	-	0	ID=cds-J4731_23225;Parent=gene-J4731_23225;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003403314.1;locus_tag=J4731_23225;product=alpha/beta fold hydrolase;pseudo=true;transl_table=11
JAGETS010000087.1	Genbank	pseudogene	33204	33653	.	+	.	ID=gene-J4731_23230;Name=J4731_23230;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_23230;pseudo=true
JAGETS010000087.1	Protein Homology	CDS	33204	33653	.	+	0	ID=cds-J4731_23230;Parent=gene-J4731_23230;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004254387.1;locus_tag=J4731_23230;product=hydrolase;pseudo=true;transl_table=11
JAGETS010000087.1	Genbank	pseudogene	33622	34285	.	-	.	ID=gene-J4731_23235;Name=J4731_23235;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_23235;pseudo=true
JAGETS010000087.1	Protein Homology	CDS	33622	34285	.	-	0	ID=cds-J4731_23235;Parent=gene-J4731_23235;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015376368.1;locus_tag=J4731_23235;product=PAS domain-containing protein;pseudo=true;transl_table=11
JAGETS010000087.1	Genbank	pseudogene	34389	35343	.	-	.	ID=gene-J4731_23240;Name=J4731_23240;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_23240;pseudo=true
JAGETS010000087.1	Protein Homology	CDS	34389	35343	.	-	0	ID=cds-J4731_23240;Parent=gene-J4731_23240;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003843525.1;locus_tag=J4731_23240;product=threo-3-hydroxy-L-aspartate ammonia-lyase;pseudo=true;transl_table=11
JAGETS010000087.1	Genbank	pseudogene	35370	35732	.	-	.	ID=gene-J4731_23245;Name=J4731_23245;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_23245;pseudo=true
JAGETS010000087.1	Protein Homology	CDS	35370	35732	.	-	0	ID=cds-J4731_23245;Parent=gene-J4731_23245;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003029233.1;locus_tag=J4731_23245;product=RidA family protein;pseudo=true;transl_table=11
JAGETS010000087.1	Genbank	pseudogene	36076	39703	.	+	.	ID=gene-J4731_23250;Name=J4731_23250;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_23250;pseudo=true
JAGETS010000087.1	Protein Homology	CDS	36076	39703	.	+	0	ID=cds-J4731_23250;Parent=gene-J4731_23250;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004244406.1;locus_tag=J4731_23250;product=DUF4132 domain-containing protein;pseudo=true;transl_table=11
##sequence-region JAGETS010000088.1 1 26785
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=587
JAGETS010000088.1	Genbank	region	1	26785	.	+	.	ID=JAGETS010000088.1:1..26785;Dbxref=taxon:587;collected-by=NHLS;collection-date=2018;country=South Africa: Pretoria;gbkey=Src;isolation-source=stool;lat-lon=25.7479 S 28.2293 E;mol_type=genomic DNA;nat-host=porcine;strain=SG003
JAGETS010000088.1	Genbank	pseudogene	4	1035	.	-	.	ID=gene-J4731_23255;Name=J4731_23255;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_23255;pseudo=true
JAGETS010000088.1	Protein Homology	CDS	4	1035	.	-	0	ID=cds-J4731_23255;Parent=gene-J4731_23255;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004250875.1;locus_tag=J4731_23255;product=hypothetical protein;pseudo=true;transl_table=11
JAGETS010000088.1	Genbank	gene	1597	1830	.	+	.	ID=gene-J4731_23260;Name=J4731_23260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_23260
JAGETS010000088.1	GeneMarkS-2+	CDS	1597	1830	.	+	0	ID=cds-MBO1929892.1;Parent=gene-J4731_23260;Dbxref=NCBI_GP:MBO1929892.1;Name=MBO1929892.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_23260;product=hypothetical protein;protein_id=MBO1929892.1;transl_table=11
JAGETS010000088.1	Genbank	pseudogene	1934	2316	.	-	.	ID=gene-J4731_23265;Name=J4731_23265;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_23265;pseudo=true
JAGETS010000088.1	Protein Homology	CDS	1934	2316	.	-	0	ID=cds-J4731_23265;Parent=gene-J4731_23265;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004225269.1;locus_tag=J4731_23265;product=terminase;pseudo=true;transl_table=11
JAGETS010000088.1	Genbank	gene	2816	3058	.	-	.	ID=gene-J4731_23270;Name=J4731_23270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_23270
JAGETS010000088.1	GeneMarkS-2+	CDS	2816	3058	.	-	0	ID=cds-MBO1929893.1;Parent=gene-J4731_23270;Dbxref=NCBI_GP:MBO1929893.1;Name=MBO1929893.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_23270;product=hypothetical protein;protein_id=MBO1929893.1;transl_table=11
JAGETS010000088.1	Genbank	gene	3075	3311	.	-	.	ID=gene-J4731_23275;Name=J4731_23275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_23275
JAGETS010000088.1	GeneMarkS-2+	CDS	3075	3311	.	-	0	ID=cds-MBO1929894.1;Parent=gene-J4731_23275;Dbxref=NCBI_GP:MBO1929894.1;Name=MBO1929894.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_23275;product=hypothetical protein;protein_id=MBO1929894.1;transl_table=11
JAGETS010000088.1	Genbank	pseudogene	3308	3869	.	-	.	ID=gene-J4731_23280;Name=J4731_23280;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_23280;pseudo=true
JAGETS010000088.1	Protein Homology	CDS	3308	3869	.	-	0	ID=cds-J4731_23280;Parent=gene-J4731_23280;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004253714.1;locus_tag=J4731_23280;product=terminase small subunit;pseudo=true;transl_table=11
JAGETS010000088.1	Genbank	pseudogene	4557	4894	.	-	.	ID=gene-J4731_23285;Name=J4731_23285;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_23285;pseudo=true
JAGETS010000088.1	Protein Homology	CDS	4557	4894	.	-	0	ID=cds-J4731_23285;Parent=gene-J4731_23285;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005967843.1;locus_tag=J4731_23285;product=hypothetical protein;pseudo=true;transl_table=11
JAGETS010000088.1	Genbank	gene	4961	5239	.	-	.	ID=gene-J4731_23290;Name=J4731_23290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_23290
JAGETS010000088.1	GeneMarkS-2+	CDS	4961	5239	.	-	0	ID=cds-MBO1929895.1;Parent=gene-J4731_23290;Dbxref=NCBI_GP:MBO1929895.1;Name=MBO1929895.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_23290;product=hypothetical protein;protein_id=MBO1929895.1;transl_table=11
JAGETS010000088.1	Genbank	gene	5264	5464	.	-	.	ID=gene-J4731_23295;Name=J4731_23295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_23295
JAGETS010000088.1	GeneMarkS-2+	CDS	5264	5464	.	-	0	ID=cds-MBO1929896.1;Parent=gene-J4731_23295;Dbxref=NCBI_GP:MBO1929896.1;Name=MBO1929896.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_23295;product=hypothetical protein;protein_id=MBO1929896.1;transl_table=11
JAGETS010000088.1	Genbank	gene	5506	5826	.	-	.	ID=gene-J4731_23300;Name=J4731_23300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_23300
JAGETS010000088.1	GeneMarkS-2+	CDS	5506	5826	.	-	0	ID=cds-MBO1929897.1;Parent=gene-J4731_23300;Dbxref=NCBI_GP:MBO1929897.1;Name=MBO1929897.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_23300;product=hypothetical protein;protein_id=MBO1929897.1;transl_table=11
JAGETS010000088.1	Genbank	pseudogene	7182	7619	.	-	.	ID=gene-J4731_23305;Name=J4731_23305;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_23305;pseudo=true
JAGETS010000088.1	Protein Homology	CDS	7182	7619	.	-	0	ID=cds-J4731_23305;Parent=gene-J4731_23305;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004253675.1;locus_tag=J4731_23305;product=replication protein;pseudo=true;transl_table=11
JAGETS010000088.1	Genbank	gene	8177	8467	.	-	.	ID=gene-J4731_23310;Name=J4731_23310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_23310
JAGETS010000088.1	GeneMarkS-2+	CDS	8177	8467	.	-	0	ID=cds-MBO1929898.1;Parent=gene-J4731_23310;Dbxref=NCBI_GP:MBO1929898.1;Name=MBO1929898.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_23310;product=hypothetical protein;protein_id=MBO1929898.1;transl_table=11
JAGETS010000088.1	Genbank	gene	8559	8762	.	-	.	ID=gene-J4731_23315;Name=J4731_23315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_23315
JAGETS010000088.1	Protein Homology	CDS	8559	8762	.	-	0	ID=cds-MBO1929899.1;Parent=gene-J4731_23315;Dbxref=NCBI_GP:MBO1929899.1;Name=MBO1929899.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003037811.1;locus_tag=J4731_23315;product=hypothetical protein;protein_id=MBO1929899.1;transl_table=11
JAGETS010000088.1	Genbank	pseudogene	9250	9840	.	+	.	ID=gene-J4731_23320;Name=J4731_23320;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_23320;pseudo=true
JAGETS010000088.1	Protein Homology	CDS	9250	9840	.	+	0	ID=cds-J4731_23320;Parent=gene-J4731_23320;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004253661.1;locus_tag=J4731_23320;product=helix-turn-helix transcriptional regulator;pseudo=true;transl_table=11
JAGETS010000088.1	Genbank	gene	10629	10856	.	+	.	ID=gene-J4731_23325;Name=J4731_23325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_23325
JAGETS010000088.1	GeneMarkS-2+	CDS	10629	10856	.	+	0	ID=cds-MBO1929900.1;Parent=gene-J4731_23325;Dbxref=NCBI_GP:MBO1929900.1;Name=MBO1929900.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_23325;product=hypothetical protein;protein_id=MBO1929900.1;transl_table=11
JAGETS010000088.1	Genbank	gene	11111	11269	.	+	.	ID=gene-J4731_23330;Name=J4731_23330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_23330
JAGETS010000088.1	GeneMarkS-2+	CDS	11111	11269	.	+	0	ID=cds-MBO1929901.1;Parent=gene-J4731_23330;Dbxref=NCBI_GP:MBO1929901.1;Name=MBO1929901.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_23330;product=hypothetical protein;protein_id=MBO1929901.1;transl_table=11
JAGETS010000088.1	Genbank	gene	11411	11719	.	+	.	ID=gene-J4731_23335;Name=J4731_23335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_23335
JAGETS010000088.1	GeneMarkS-2+	CDS	11411	11719	.	+	0	ID=cds-MBO1929902.1;Parent=gene-J4731_23335;Dbxref=NCBI_GP:MBO1929902.1;Name=MBO1929902.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_23335;product=hypothetical protein;protein_id=MBO1929902.1;transl_table=11
JAGETS010000088.1	Genbank	pseudogene	11761	12847	.	+	.	ID=gene-J4731_23340;Name=J4731_23340;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_23340;pseudo=true
JAGETS010000088.1	Protein Homology	CDS	11761	12847	.	+	0	ID=cds-J4731_23340;Parent=gene-J4731_23340;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004243377.1;locus_tag=J4731_23340;product=recombinase RecT;pseudo=true;transl_table=11
JAGETS010000088.1	Genbank	gene	13227	13409	.	+	.	ID=gene-J4731_23345;Name=J4731_23345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_23345
JAGETS010000088.1	GeneMarkS-2+	CDS	13227	13409	.	+	0	ID=cds-MBO1929903.1;Parent=gene-J4731_23345;Dbxref=NCBI_GP:MBO1929903.1;Name=MBO1929903.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_23345;product=hypothetical protein;protein_id=MBO1929903.1;transl_table=11
JAGETS010000088.1	Genbank	gene	13438	13833	.	+	.	ID=gene-J4731_23350;Name=J4731_23350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_23350
JAGETS010000088.1	GeneMarkS-2+	CDS	13438	13833	.	+	0	ID=cds-MBO1929904.1;Parent=gene-J4731_23350;Dbxref=NCBI_GP:MBO1929904.1;Name=MBO1929904.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_23350;product=hypothetical protein;protein_id=MBO1929904.1;transl_table=11
JAGETS010000088.1	Genbank	gene	13839	14027	.	+	.	ID=gene-J4731_23355;Name=J4731_23355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_23355
JAGETS010000088.1	GeneMarkS-2+	CDS	13839	14027	.	+	0	ID=cds-MBO1929905.1;Parent=gene-J4731_23355;Dbxref=NCBI_GP:MBO1929905.1;Name=MBO1929905.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_23355;product=hypothetical protein;protein_id=MBO1929905.1;transl_table=11
JAGETS010000088.1	Genbank	gene	14178	14342	.	+	.	ID=gene-J4731_23360;Name=J4731_23360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_23360
JAGETS010000088.1	Protein Homology	CDS	14178	14342	.	+	0	ID=cds-MBO1929906.1;Parent=gene-J4731_23360;Dbxref=NCBI_GP:MBO1929906.1;Name=MBO1929906.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004255261.1;locus_tag=J4731_23360;product=hook protein;protein_id=MBO1929906.1;transl_table=11
JAGETS010000088.1	Genbank	pseudogene	14622	15072	.	+	.	ID=gene-J4731_23365;Name=J4731_23365;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_23365;pseudo=true
JAGETS010000088.1	Protein Homology	CDS	14622	15072	.	+	0	ID=cds-J4731_23365;Parent=gene-J4731_23365;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004244703.1;locus_tag=J4731_23365;product=ASCH domain-containing protein;pseudo=true;transl_table=11
JAGETS010000088.1	Genbank	gene	15913	16110	.	+	.	ID=gene-J4731_23370;Name=J4731_23370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_23370
JAGETS010000088.1	GeneMarkS-2+	CDS	15913	16110	.	+	0	ID=cds-MBO1929907.1;Parent=gene-J4731_23370;Dbxref=NCBI_GP:MBO1929907.1;Name=MBO1929907.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_23370;product=hypothetical protein;protein_id=MBO1929907.1;transl_table=11
JAGETS010000088.1	Genbank	gene	16107	16292	.	+	.	ID=gene-J4731_23375;Name=J4731_23375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_23375
JAGETS010000088.1	GeneMarkS-2+	CDS	16107	16292	.	+	0	ID=cds-MBO1929908.1;Parent=gene-J4731_23375;Dbxref=NCBI_GP:MBO1929908.1;Name=MBO1929908.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_23375;product=hypothetical protein;protein_id=MBO1929908.1;transl_table=11
JAGETS010000088.1	Genbank	pseudogene	16613	17262	.	+	.	ID=gene-J4731_23380;Name=J4731_23380;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_23380;pseudo=true
JAGETS010000088.1	Protein Homology	CDS	16613	17262	.	+	0	ID=cds-J4731_23380;Parent=gene-J4731_23380;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004253616.1;locus_tag=J4731_23380;product=DNA methyltransferase;pseudo=true;transl_table=11
JAGETS010000088.1	Genbank	gene	17255	17440	.	+	.	ID=gene-J4731_23385;Name=J4731_23385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_23385
JAGETS010000088.1	Protein Homology	CDS	17255	17440	.	+	0	ID=cds-MBO1929909.1;Parent=gene-J4731_23385;Dbxref=NCBI_GP:MBO1929909.1;Name=MBO1929909.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006658862.1;locus_tag=J4731_23385;product=hypothetical protein;protein_id=MBO1929909.1;transl_table=11
JAGETS010000088.1	Genbank	pseudogene	17453	18568	.	-	.	ID=gene-J4731_23390;Name=J4731_23390;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_23390;pseudo=true
JAGETS010000088.1	Protein Homology	CDS	17453	18568	.	-	0	ID=cds-J4731_23390;Parent=gene-J4731_23390;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000954547.1;locus_tag=J4731_23390;product=site-specific integrase;pseudo=true;transl_table=11
JAGETS010000088.1	Genbank	pseudogene	18858	20357	.	-	.	ID=gene-J4731_23395;Name=guaA;gbkey=Gene;gene=guaA;gene_biotype=pseudogene;locus_tag=J4731_23395;pseudo=true
JAGETS010000088.1	Protein Homology	CDS	18858	20357	.	-	0	ID=cds-J4731_23395;Parent=gene-J4731_23395;Note=frameshifted;gbkey=CDS;gene=guaA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002359975.1;locus_tag=J4731_23395;product=glutamine-hydrolyzing GMP synthase;pseudo=true;transl_table=11
JAGETS010000088.1	Genbank	pseudogene	20519	21947	.	-	.	ID=gene-J4731_23400;Name=guaB;gbkey=Gene;gene=guaB;gene_biotype=pseudogene;locus_tag=J4731_23400;pseudo=true
JAGETS010000088.1	Protein Homology	CDS	20519	21947	.	-	0	ID=cds-J4731_23400;Parent=gene-J4731_23400;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;gene=guaB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004253607.1;locus_tag=J4731_23400;product=IMP dehydrogenase;pseudo=true;transl_table=11
JAGETS010000088.1	Genbank	pseudogene	22122	23512	.	+	.	ID=gene-J4731_23405;Name=xseA;gbkey=Gene;gene=xseA;gene_biotype=pseudogene;locus_tag=J4731_23405;pseudo=true
JAGETS010000088.1	Protein Homology	CDS	22122	23512	.	+	0	ID=cds-J4731_23405;Parent=gene-J4731_23405;Note=frameshifted;gbkey=CDS;gene=xseA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012124055.1;locus_tag=J4731_23405;product=exodeoxyribonuclease VII large subunit;pseudo=true;transl_table=11
JAGETS010000088.1	Genbank	pseudogene	23544	25778	.	-	.	ID=gene-J4731_23410;Name=J4731_23410;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_23410;pseudo=true
JAGETS010000088.1	Protein Homology	CDS	23544	25778	.	-	0	ID=cds-J4731_23410;Parent=gene-J4731_23410;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006661619.1;locus_tag=J4731_23410;product=TonB-dependent receptor;pseudo=true;transl_table=11
JAGETS010000088.1	Genbank	pseudogene	25918	26785	.	-	.	ID=gene-J4731_23415;Name=J4731_23415;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_23415;pseudo=true
JAGETS010000088.1	Protein Homology	CDS	25918	26785	.	-	1	ID=cds-J4731_23415;Parent=gene-J4731_23415;Note=frameshifted%3B incomplete%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006658870.1;locus_tag=J4731_23415;product=S9 family peptidase;pseudo=true;transl_table=11
##sequence-region JAGETS010000089.1 1 11929
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=587
JAGETS010000089.1	Genbank	region	1	11929	.	+	.	ID=JAGETS010000089.1:1..11929;Dbxref=taxon:587;collected-by=NHLS;collection-date=2018;country=South Africa: Pretoria;gbkey=Src;isolation-source=stool;lat-lon=25.7479 S 28.2293 E;mol_type=genomic DNA;nat-host=porcine;strain=SG003
JAGETS010000089.1	Genbank	gene	639	890	.	-	.	ID=gene-J4731_23420;Name=J4731_23420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_23420
JAGETS010000089.1	Protein Homology	CDS	639	890	.	-	0	ID=cds-MBO1929910.1;Parent=gene-J4731_23420;Dbxref=NCBI_GP:MBO1929910.1;Name=MBO1929910.1;Note=with CpbA modulates the activity of the dnaK chaperone system%3B interacts with CbpA and inhibits both the DnaJ-like co-chaperone activity and the DNA binding activity of CbpA;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012132924.1;locus_tag=J4731_23420;product=chaperone-modulator protein CbpM;protein_id=MBO1929910.1;transl_table=11
JAGETS010000089.1	Genbank	pseudogene	909	1870	.	-	.	ID=gene-J4731_23425;Name=cbpA;gbkey=Gene;gene=cbpA;gene_biotype=pseudogene;locus_tag=J4731_23425;pseudo=true
JAGETS010000089.1	Protein Homology	CDS	909	1870	.	-	0	ID=cds-J4731_23425;Parent=gene-J4731_23425;Note=frameshifted;gbkey=CDS;gene=cbpA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000420634.1;locus_tag=J4731_23425;product=curved DNA-binding protein;pseudo=true;transl_table=11
JAGETS010000089.1	Genbank	pseudogene	2079	2535	.	+	.	ID=gene-J4731_23430;Name=J4731_23430;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_23430;pseudo=true
JAGETS010000089.1	Protein Homology	CDS	2079	2535	.	+	0	ID=cds-J4731_23430;Parent=gene-J4731_23430;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006662026.1;locus_tag=J4731_23430;product=GNAT family N-acetyltransferase;pseudo=true;transl_table=11
JAGETS010000089.1	Genbank	pseudogene	2726	3453	.	-	.	ID=gene-J4731_23435;Name=J4731_23435;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_23435;pseudo=true
JAGETS010000089.1	Protein Homology	CDS	2726	3453	.	-	0	ID=cds-J4731_23435;Parent=gene-J4731_23435;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001087467.1;locus_tag=J4731_23435;product=RNA polymerase sigma factor FliA;pseudo=true;transl_table=11
JAGETS010000089.1	Genbank	pseudogene	4091	5260	.	+	.	ID=gene-J4731_23440;Name=J4731_23440;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_23440;pseudo=true
JAGETS010000089.1	Protein Homology	CDS	4091	5260	.	+	0	ID=cds-J4731_23440;Parent=gene-J4731_23440;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004255556.1;locus_tag=J4731_23440;product=MFS transporter;pseudo=true;transl_table=11
JAGETS010000089.1	Genbank	pseudogene	5441	6524	.	-	.	ID=gene-J4731_23445;Name=J4731_23445;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_23445;pseudo=true
JAGETS010000089.1	Protein Homology	CDS	5441	6524	.	-	0	ID=cds-J4731_23445;Parent=gene-J4731_23445;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017827780.1;locus_tag=J4731_23445;product=FliC/FljB family flagellin;pseudo=true;transl_table=11
JAGETS010000089.1	Genbank	pseudogene	6883	8301	.	+	.	ID=gene-J4731_23450;Name=fliD;gbkey=Gene;gene=fliD;gene_biotype=pseudogene;locus_tag=J4731_23450;pseudo=true
JAGETS010000089.1	Protein Homology	CDS	6883	8301	.	+	0	ID=cds-J4731_23450;Parent=gene-J4731_23450;Note=frameshifted%3B internal stop;gbkey=CDS;gene=fliD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006657544.1;locus_tag=J4731_23450;product=flagellar filament capping protein FliD;pseudo=true;transl_table=11
JAGETS010000089.1	Genbank	pseudogene	8324	8719	.	+	.	ID=gene-J4731_23455;Name=fliS;gbkey=Gene;gene=fliS;gene_biotype=pseudogene;locus_tag=J4731_23455;pseudo=true
JAGETS010000089.1	Protein Homology	CDS	8324	8719	.	+	0	ID=cds-J4731_23455;Parent=gene-J4731_23455;Note=internal stop;gbkey=CDS;gene=fliS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004236802.1;locus_tag=J4731_23455;product=flagellar export chaperone FliS;pseudo=true;transl_table=11
JAGETS010000089.1	Genbank	pseudogene	8709	9096	.	+	.	ID=gene-J4731_23460;Name=fliT;gbkey=Gene;gene=fliT;gene_biotype=pseudogene;locus_tag=J4731_23460;pseudo=true
JAGETS010000089.1	Protein Homology	CDS	8709	9096	.	+	0	ID=cds-J4731_23460;Parent=gene-J4731_23460;Note=frameshifted;gbkey=CDS;gene=fliT;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006657542.1;locus_tag=J4731_23460;product=flagellar protein FliT;pseudo=true;transl_table=11
JAGETS010000089.1	Genbank	pseudogene	9174	9644	.	-	.	ID=gene-J4731_23465;Name=J4731_23465;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_23465;pseudo=true
JAGETS010000089.1	Protein Homology	CDS	9174	9644	.	-	0	ID=cds-J4731_23465;Parent=gene-J4731_23465;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013183628.1;locus_tag=J4731_23465;product=peptide deformylase;pseudo=true;transl_table=11
JAGETS010000089.1	Genbank	pseudogene	11051	11262	.	+	.	ID=gene-J4731_23470;Name=J4731_23470;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_23470;pseudo=true
JAGETS010000089.1	Protein Homology	CDS	11051	11262	.	+	0	ID=cds-J4731_23470;Parent=gene-J4731_23470;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004918696.1;locus_tag=J4731_23470;product=YadA-like family protein;pseudo=true;transl_table=11
JAGETS010000089.1	Genbank	gene	11450	11701	.	-	.	ID=gene-J4731_23475;Name=J4731_23475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_23475
JAGETS010000089.1	GeneMarkS-2+	CDS	11450	11701	.	-	0	ID=cds-MBO1929911.1;Parent=gene-J4731_23475;Dbxref=NCBI_GP:MBO1929911.1;Name=MBO1929911.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_23475;product=hypothetical protein;protein_id=MBO1929911.1;transl_table=11
##sequence-region JAGETS010000009.1 1 20665
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=587
JAGETS010000009.1	Genbank	region	1	20665	.	+	.	ID=JAGETS010000009.1:1..20665;Dbxref=taxon:587;collected-by=NHLS;collection-date=2018;country=South Africa: Pretoria;gbkey=Src;isolation-source=stool;lat-lon=25.7479 S 28.2293 E;mol_type=genomic DNA;nat-host=porcine;strain=SG003
JAGETS010000009.1	Genbank	pseudogene	1	1420	.	+	.	ID=gene-J4731_06185;Name=J4731_06185;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_06185;pseudo=true
JAGETS010000009.1	Protein Homology	CDS	1	1420	.	+	1	ID=cds-J4731_06185;Parent=gene-J4731_06185;Note=frameshifted%3B internal stop%3B incomplete%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020196412.1;locus_tag=J4731_06185;product=tyrosine-type recombinase/integrase;pseudo=true;transl_table=11
JAGETS010000009.1	Genbank	pseudogene	1476	4066	.	+	.	ID=gene-J4731_06190;Name=J4731_06190;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_06190;pseudo=true
JAGETS010000009.1	Protein Homology	CDS	1476	4066	.	+	0	ID=cds-J4731_06190;Parent=gene-J4731_06190;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001567860.1;locus_tag=J4731_06190;product=integrase;pseudo=true;transl_table=11
JAGETS010000009.1	Genbank	pseudogene	4066	4738	.	+	.	ID=gene-J4731_06195;Name=J4731_06195;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_06195;pseudo=true
JAGETS010000009.1	Protein Homology	CDS	4066	4738	.	+	0	ID=cds-J4731_06195;Parent=gene-J4731_06195;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000353920.1;locus_tag=J4731_06195;product=hypothetical protein;pseudo=true;transl_table=11
JAGETS010000009.1	Genbank	pseudogene	4738	5174	.	+	.	ID=gene-J4731_06200;Name=J4731_06200;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_06200;pseudo=true
JAGETS010000009.1	Protein Homology	CDS	4738	5174	.	+	0	ID=cds-J4731_06200;Parent=gene-J4731_06200;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001273479.1;locus_tag=J4731_06200;product=hypothetical protein;pseudo=true;transl_table=11
JAGETS010000009.1	Genbank	pseudogene	5171	6673	.	+	.	ID=gene-J4731_06205;Name=J4731_06205;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_06205;pseudo=true
JAGETS010000009.1	Protein Homology	CDS	5171	6673	.	+	0	ID=cds-J4731_06205;Parent=gene-J4731_06205;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016807540.1;locus_tag=J4731_06205;product=AAA family ATPase;pseudo=true;transl_table=11
JAGETS010000009.1	Genbank	gene	7093	7332	.	+	.	ID=gene-J4731_06210;Name=J4731_06210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_06210
JAGETS010000009.1	Protein Homology	CDS	7093	7332	.	+	0	ID=cds-MBO1928942.1;Parent=gene-J4731_06210;Dbxref=NCBI_GP:MBO1928942.1;Name=MBO1928942.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024928.1;locus_tag=J4731_06210;product=ATP-binding domain-containing protein;protein_id=MBO1928942.1;transl_table=11
JAGETS010000009.1	Genbank	pseudogene	7576	8817	.	-	.	ID=gene-J4731_06215;Name=tyrS;gbkey=Gene;gene=tyrS;gene_biotype=pseudogene;locus_tag=J4731_06215;pseudo=true
JAGETS010000009.1	Protein Homology	CDS	7576	8817	.	-	0	ID=cds-J4731_06215;Parent=gene-J4731_06215;Note=frameshifted;gbkey=CDS;gene=tyrS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014611864.1;locus_tag=J4731_06215;product=tyrosine--tRNA ligase;pseudo=true;transl_table=11
JAGETS010000009.1	Genbank	gene	8958	9629	.	-	.	ID=gene-J4731_06220;Name=J4731_06220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_06220
JAGETS010000009.1	Protein Homology	CDS	8958	9629	.	-	0	ID=cds-MBO1928943.1;Parent=gene-J4731_06220;Dbxref=NCBI_GP:MBO1928943.1;Name=MBO1928943.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012422.1;locus_tag=J4731_06220;product=hypothetical protein;protein_id=MBO1928943.1;transl_table=11
JAGETS010000009.1	Genbank	gene	10424	10717	.	+	.	ID=gene-J4731_06225;Name=J4731_06225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_06225
JAGETS010000009.1	GeneMarkS-2+	CDS	10424	10717	.	+	0	ID=cds-MBO1928944.1;Parent=gene-J4731_06225;Dbxref=NCBI_GP:MBO1928944.1;Name=MBO1928944.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_06225;product=hypothetical protein;protein_id=MBO1928944.1;transl_table=11
JAGETS010000009.1	Genbank	pseudogene	10727	11253	.	+	.	ID=gene-J4731_06230;Name=J4731_06230;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_06230;pseudo=true
JAGETS010000009.1	Protein Homology	CDS	10727	11253	.	+	0	ID=cds-J4731_06230;Parent=gene-J4731_06230;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010298465.1;locus_tag=J4731_06230;product=GGDEF domain-containing protein;pseudo=true;transl_table=11
JAGETS010000009.1	Genbank	gene	11278	11436	.	-	.	ID=gene-J4731_06235;Name=J4731_06235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_06235
JAGETS010000009.1	Protein Homology	CDS	11278	11436	.	-	0	ID=cds-MBO1928945.1;Parent=gene-J4731_06235;Dbxref=NCBI_GP:MBO1928945.1;Name=MBO1928945.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014567.1;locus_tag=J4731_06235;product=hypothetical protein;protein_id=MBO1928945.1;transl_table=11
JAGETS010000009.1	Genbank	gene	11622	11945	.	-	.	ID=gene-J4731_06240;Name=J4731_06240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_06240
JAGETS010000009.1	Protein Homology	CDS	11622	11945	.	-	0	ID=cds-MBO1928946.1;Parent=gene-J4731_06240;Dbxref=NCBI_GP:MBO1928946.1;Name=MBO1928946.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012722.1;locus_tag=J4731_06240;product=hypothetical protein;protein_id=MBO1928946.1;transl_table=11
JAGETS010000009.1	Genbank	gene	11942	12361	.	-	.	ID=gene-J4731_06245;Name=J4731_06245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_06245
JAGETS010000009.1	Protein Homology	CDS	11942	12361	.	-	0	ID=cds-MBO1928947.1;Parent=gene-J4731_06245;Dbxref=NCBI_GP:MBO1928947.1;Name=MBO1928947.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012876.1;locus_tag=J4731_06245;product=HAMP domain-containing protein;protein_id=MBO1928947.1;transl_table=11
JAGETS010000009.1	Genbank	pseudogene	12330	13015	.	-	.	ID=gene-J4731_06250;Name=J4731_06250;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_06250;pseudo=true
JAGETS010000009.1	Protein Homology	CDS	12330	13015	.	-	0	ID=cds-J4731_06250;Parent=gene-J4731_06250;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014594389.1;locus_tag=J4731_06250;product=response regulator transcription factor;pseudo=true;transl_table=11
JAGETS010000009.1	Genbank	gene	13230	13904	.	+	.	ID=gene-J4731_06255;Name=J4731_06255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_06255
JAGETS010000009.1	Protein Homology	CDS	13230	13904	.	+	0	ID=cds-MBO1928948.1;Parent=gene-J4731_06255;Dbxref=NCBI_GP:MBO1928948.1;Name=MBO1928948.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR01730.1;locus_tag=J4731_06255;product=efflux RND transporter periplasmic adaptor subunit;protein_id=MBO1928948.1;transl_table=11
JAGETS010000009.1	Genbank	gene	13886	14353	.	+	.	ID=gene-J4731_06260;Name=J4731_06260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_06260
JAGETS010000009.1	Protein Homology	CDS	13886	14353	.	+	0	ID=cds-MBO1928949.1;Parent=gene-J4731_06260;Dbxref=NCBI_GP:MBO1928949.1;Name=MBO1928949.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR01730.1;locus_tag=J4731_06260;product=efflux RND transporter periplasmic adaptor subunit;protein_id=MBO1928949.1;transl_table=11
JAGETS010000009.1	Genbank	pseudogene	14418	17498	.	+	.	ID=gene-J4731_06265;Name=J4731_06265;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_06265;pseudo=true
JAGETS010000009.1	Protein Homology	CDS	14418	17498	.	+	0	ID=cds-J4731_06265;Parent=gene-J4731_06265;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002039164.1;locus_tag=J4731_06265;product=multidrug efflux RND transporter permease subunit;pseudo=true;transl_table=11
JAGETS010000009.1	Genbank	gene	17498	18277	.	+	.	ID=gene-J4731_06270;Name=J4731_06270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_06270
JAGETS010000009.1	Protein Homology	CDS	17498	18277	.	+	0	ID=cds-MBO1928950.1;Parent=gene-J4731_06270;Dbxref=NCBI_GP:MBO1928950.1;Name=MBO1928950.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014385.1;locus_tag=J4731_06270;product=TolC family protein;protein_id=MBO1928950.1;transl_table=11
JAGETS010000009.1	Genbank	gene	18271	18426	.	+	.	ID=gene-J4731_06275;Name=J4731_06275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_06275
JAGETS010000009.1	GeneMarkS-2+	CDS	18271	18426	.	+	0	ID=cds-MBO1928951.1;Parent=gene-J4731_06275;Dbxref=NCBI_GP:MBO1928951.1;Name=MBO1928951.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_06275;product=hypothetical protein;protein_id=MBO1928951.1;transl_table=11
JAGETS010000009.1	Genbank	gene	18623	18871	.	+	.	ID=gene-J4731_06280;Name=J4731_06280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_06280
JAGETS010000009.1	Protein Homology	CDS	18623	18871	.	+	0	ID=cds-MBO1928952.1;Parent=gene-J4731_06280;Dbxref=NCBI_GP:MBO1928952.1;Name=MBO1928952.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014385.1;locus_tag=J4731_06280;product=hypothetical protein;protein_id=MBO1928952.1;transl_table=11
JAGETS010000009.1	Genbank	gene	19012	19371	.	+	.	ID=gene-J4731_06285;Name=J4731_06285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_06285
JAGETS010000009.1	Protein Homology	CDS	19012	19371	.	+	0	ID=cds-MBO1928953.1;Parent=gene-J4731_06285;Dbxref=NCBI_GP:MBO1928953.1;Name=MBO1928953.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019310.1;locus_tag=J4731_06285;product=MFS transporter;protein_id=MBO1928953.1;transl_table=11
JAGETS010000009.1	Genbank	gene	19454	20170	.	+	.	ID=gene-J4731_06290;Name=J4731_06290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_06290
JAGETS010000009.1	Protein Homology	CDS	19454	20170	.	+	0	ID=cds-MBO1928954.1;Parent=gene-J4731_06290;Dbxref=NCBI_GP:MBO1928954.1;Name=MBO1928954.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017760.1;locus_tag=J4731_06290;product=MFS transporter;protein_id=MBO1928954.1;transl_table=11
JAGETS010000009.1	Genbank	gene	20473	20665	.	-	.	ID=gene-J4731_06295;Name=J4731_06295;end_range=20665,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_06295;partial=true
JAGETS010000009.1	GeneMarkS-2+	CDS	20473	20665	.	-	1	ID=cds-MBO1928955.1;Parent=gene-J4731_06295;Dbxref=NCBI_GP:MBO1928955.1;Name=MBO1928955.1;end_range=20665,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_06295;partial=true;product=hypothetical protein;protein_id=MBO1928955.1;transl_table=11
##sequence-region JAGETS010000090.1 1 13367
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=587
JAGETS010000090.1	Genbank	region	1	13367	.	+	.	ID=JAGETS010000090.1:1..13367;Dbxref=taxon:587;collected-by=NHLS;collection-date=2018;country=South Africa: Pretoria;gbkey=Src;isolation-source=stool;lat-lon=25.7479 S 28.2293 E;mol_type=genomic DNA;nat-host=porcine;strain=SG003
JAGETS010000090.1	Genbank	gene	505	657	.	-	.	ID=gene-J4731_23480;Name=J4731_23480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_23480
JAGETS010000090.1	Protein Homology	CDS	505	657	.	-	0	ID=cds-MBO1929912.1;Parent=gene-J4731_23480;Dbxref=NCBI_GP:MBO1929912.1;Name=MBO1929912.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF037672.1;locus_tag=J4731_23480;product=hypothetical protein;protein_id=MBO1929912.1;transl_table=11
JAGETS010000090.1	Genbank	gene	1773	2288	.	+	.	ID=gene-J4731_23485;Name=J4731_23485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_23485
JAGETS010000090.1	Protein Homology	CDS	1773	2288	.	+	0	ID=cds-MBO1929913.1;Parent=gene-J4731_23485;Dbxref=NCBI_GP:MBO1929913.1;Name=MBO1929913.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR01901.1;locus_tag=J4731_23485;product=filamentous hemagglutinin N-terminal domain-containing protein;protein_id=MBO1929913.1;transl_table=11
JAGETS010000090.1	Genbank	gene	2291	2512	.	+	.	ID=gene-J4731_23490;Name=J4731_23490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_23490
JAGETS010000090.1	GeneMarkS-2+	CDS	2291	2512	.	+	0	ID=cds-MBO1929914.1;Parent=gene-J4731_23490;Dbxref=NCBI_GP:MBO1929914.1;Name=MBO1929914.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_23490;product=hypothetical protein;protein_id=MBO1929914.1;transl_table=11
JAGETS010000090.1	Genbank	pseudogene	2586	3966	.	-	.	ID=gene-J4731_23495;Name=J4731_23495;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_23495;pseudo=true
JAGETS010000090.1	Protein Homology	CDS	2586	3966	.	-	0	ID=cds-J4731_23495;Parent=gene-J4731_23495;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006659303.1;locus_tag=J4731_23495;product=DASS family sodium-coupled anion symporter;pseudo=true;transl_table=11
JAGETS010000090.1	Genbank	gene	4356	4757	.	-	.	ID=gene-J4731_23500;Name=J4731_23500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_23500
JAGETS010000090.1	GeneMarkS-2+	CDS	4356	4757	.	-	0	ID=cds-MBO1929915.1;Parent=gene-J4731_23500;Dbxref=NCBI_GP:MBO1929915.1;Name=MBO1929915.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_23500;product=hypothetical protein;protein_id=MBO1929915.1;transl_table=11
JAGETS010000090.1	Genbank	gene	5130	5444	.	-	.	ID=gene-J4731_23505;Name=J4731_23505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_23505
JAGETS010000090.1	GeneMarkS-2+	CDS	5130	5444	.	-	0	ID=cds-MBO1929916.1;Parent=gene-J4731_23505;Dbxref=NCBI_GP:MBO1929916.1;Name=MBO1929916.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_23505;product=hypothetical protein;protein_id=MBO1929916.1;transl_table=11
JAGETS010000090.1	Genbank	gene	5629	5808	.	-	.	ID=gene-J4731_23510;Name=J4731_23510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_23510
JAGETS010000090.1	GeneMarkS-2+	CDS	5629	5808	.	-	0	ID=cds-MBO1929917.1;Parent=gene-J4731_23510;Dbxref=NCBI_GP:MBO1929917.1;Name=MBO1929917.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_23510;product=hypothetical protein;protein_id=MBO1929917.1;transl_table=11
JAGETS010000090.1	Genbank	gene	5816	6139	.	-	.	ID=gene-J4731_23515;Name=J4731_23515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_23515
JAGETS010000090.1	GeneMarkS-2+	CDS	5816	6139	.	-	0	ID=cds-MBO1929918.1;Parent=gene-J4731_23515;Dbxref=NCBI_GP:MBO1929918.1;Name=MBO1929918.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_23515;product=hypothetical protein;protein_id=MBO1929918.1;transl_table=11
JAGETS010000090.1	Genbank	gene	6130	6405	.	-	.	ID=gene-J4731_23520;Name=J4731_23520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_23520
JAGETS010000090.1	Protein Homology	CDS	6130	6405	.	-	0	ID=cds-MBO1929919.1;Parent=gene-J4731_23520;Dbxref=NCBI_GP:MBO1929919.1;Name=MBO1929919.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024322.1;locus_tag=J4731_23520;product=hypothetical protein;protein_id=MBO1929919.1;transl_table=11
JAGETS010000090.1	Genbank	gene	6457	6708	.	-	.	ID=gene-J4731_23525;Name=J4731_23525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_23525
JAGETS010000090.1	Protein Homology	CDS	6457	6708	.	-	0	ID=cds-MBO1929920.1;Parent=gene-J4731_23525;Dbxref=NCBI_GP:MBO1929920.1;Name=MBO1929920.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024322.1;locus_tag=J4731_23525;product=hypothetical protein;protein_id=MBO1929920.1;transl_table=11
JAGETS010000090.1	Genbank	gene	6669	7043	.	-	.	ID=gene-J4731_23530;Name=J4731_23530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_23530
JAGETS010000090.1	Protein Homology	CDS	6669	7043	.	-	0	ID=cds-MBO1929921.1;Parent=gene-J4731_23530;Dbxref=NCBI_GP:MBO1929921.1;Name=MBO1929921.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024322.1;locus_tag=J4731_23530;product=hypothetical protein;protein_id=MBO1929921.1;transl_table=11
JAGETS010000090.1	Genbank	gene	6986	7213	.	-	.	ID=gene-J4731_23535;Name=J4731_23535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_23535
JAGETS010000090.1	Protein Homology	CDS	6986	7213	.	-	0	ID=cds-MBO1929922.1;Parent=gene-J4731_23535;Dbxref=NCBI_GP:MBO1929922.1;Name=MBO1929922.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024322.1;locus_tag=J4731_23535;product=hypothetical protein;protein_id=MBO1929922.1;transl_table=11
JAGETS010000090.1	Genbank	gene	7161	7358	.	-	.	ID=gene-J4731_23540;Name=J4731_23540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_23540
JAGETS010000090.1	Protein Homology	CDS	7161	7358	.	-	0	ID=cds-MBO1929923.1;Parent=gene-J4731_23540;Dbxref=NCBI_GP:MBO1929923.1;Name=MBO1929923.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024322.1;locus_tag=J4731_23540;product=hypothetical protein;protein_id=MBO1929923.1;transl_table=11
JAGETS010000090.1	Genbank	gene	7393	7734	.	-	.	ID=gene-J4731_23545;Name=J4731_23545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_23545
JAGETS010000090.1	Protein Homology	CDS	7393	7734	.	-	0	ID=cds-MBO1929924.1;Parent=gene-J4731_23545;Dbxref=NCBI_GP:MBO1929924.1;Name=MBO1929924.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024322.1;locus_tag=J4731_23545;product=hypothetical protein;protein_id=MBO1929924.1;transl_table=11
JAGETS010000090.1	Genbank	gene	7731	7898	.	-	.	ID=gene-J4731_23550;Name=J4731_23550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_23550
JAGETS010000090.1	GeneMarkS-2+	CDS	7731	7898	.	-	0	ID=cds-MBO1929925.1;Parent=gene-J4731_23550;Dbxref=NCBI_GP:MBO1929925.1;Name=MBO1929925.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_23550;product=hypothetical protein;protein_id=MBO1929925.1;transl_table=11
JAGETS010000090.1	Genbank	pseudogene	8027	9229	.	-	.	ID=gene-J4731_23555;Name=J4731_23555;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_23555;pseudo=true
JAGETS010000090.1	Protein Homology	CDS	8027	9229	.	-	0	ID=cds-J4731_23555;Parent=gene-J4731_23555;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001339197.1;locus_tag=J4731_23555;product=IS4-like element ISVsa5 family transposase;pseudo=true;transl_table=11
JAGETS010000090.1	Genbank	gene	9330	9479	.	-	.	ID=gene-J4731_23560;Name=J4731_23560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_23560
JAGETS010000090.1	GeneMarkS-2+	CDS	9330	9479	.	-	0	ID=cds-MBO1929926.1;Parent=gene-J4731_23560;Dbxref=NCBI_GP:MBO1929926.1;Name=MBO1929926.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_23560;product=hypothetical protein;protein_id=MBO1929926.1;transl_table=11
JAGETS010000090.1	Genbank	gene	9922	10200	.	-	.	ID=gene-J4731_23565;Name=J4731_23565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_23565
JAGETS010000090.1	GeneMarkS-2+	CDS	9922	10200	.	-	0	ID=cds-MBO1929927.1;Parent=gene-J4731_23565;Dbxref=NCBI_GP:MBO1929927.1;Name=MBO1929927.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_23565;product=hypothetical protein;protein_id=MBO1929927.1;transl_table=11
JAGETS010000090.1	Genbank	gene	10262	10531	.	-	.	ID=gene-J4731_23570;Name=J4731_23570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_23570
JAGETS010000090.1	GeneMarkS-2+	CDS	10262	10531	.	-	0	ID=cds-MBO1929928.1;Parent=gene-J4731_23570;Dbxref=NCBI_GP:MBO1929928.1;Name=MBO1929928.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_23570;product=hypothetical protein;protein_id=MBO1929928.1;transl_table=11
JAGETS010000090.1	Genbank	gene	10946	11116	.	-	.	ID=gene-J4731_23575;Name=J4731_23575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_23575
JAGETS010000090.1	GeneMarkS-2+	CDS	10946	11116	.	-	0	ID=cds-MBO1929929.1;Parent=gene-J4731_23575;Dbxref=NCBI_GP:MBO1929929.1;Name=MBO1929929.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_23575;product=hypothetical protein;protein_id=MBO1929929.1;transl_table=11
JAGETS010000090.1	Genbank	pseudogene	11689	13031	.	-	.	ID=gene-J4731_23580;Name=eno;gbkey=Gene;gene=eno;gene_biotype=pseudogene;locus_tag=J4731_23580;pseudo=true
JAGETS010000090.1	Protein Homology	CDS	11689	13031	.	-	0	ID=cds-J4731_23580;Parent=gene-J4731_23580;Note=frameshifted%3B internal stop;gbkey=CDS;gene=eno;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015670958.1;locus_tag=J4731_23580;product=phosphopyruvate hydratase;pseudo=true;transl_table=11
JAGETS010000090.1	Genbank	gene	13059	13211	.	-	.	ID=gene-J4731_23585;Name=J4731_23585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_23585
JAGETS010000090.1	GeneMarkS-2+	CDS	13059	13211	.	-	0	ID=cds-MBO1929930.1;Parent=gene-J4731_23585;Dbxref=NCBI_GP:MBO1929930.1;Name=MBO1929930.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_23585;product=hypothetical protein;protein_id=MBO1929930.1;transl_table=11
##sequence-region JAGETS010000091.1 1 14614
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=587
JAGETS010000091.1	Genbank	region	1	14614	.	+	.	ID=JAGETS010000091.1:1..14614;Dbxref=taxon:587;collected-by=NHLS;collection-date=2018;country=South Africa: Pretoria;gbkey=Src;isolation-source=stool;lat-lon=25.7479 S 28.2293 E;mol_type=genomic DNA;nat-host=porcine;strain=SG003
JAGETS010000091.1	Genbank	pseudogene	1	2126	.	+	.	ID=gene-J4731_23590;Name=J4731_23590;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_23590;pseudo=true
JAGETS010000091.1	Protein Homology	CDS	1	2126	.	+	2	ID=cds-J4731_23590;Parent=gene-J4731_23590;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006658823.1;locus_tag=J4731_23590;product=hypothetical protein;pseudo=true;transl_table=11
JAGETS010000091.1	Genbank	pseudogene	2140	2578	.	+	.	ID=gene-J4731_23595;Name=J4731_23595;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_23595;pseudo=true
JAGETS010000091.1	Protein Homology	CDS	2140	2578	.	+	0	ID=cds-J4731_23595;Parent=gene-J4731_23595;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006658822.1;locus_tag=J4731_23595;product=hypothetical protein;pseudo=true;transl_table=11
JAGETS010000091.1	Genbank	pseudogene	2587	3108	.	+	.	ID=gene-J4731_23600;Name=J4731_23600;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_23600;pseudo=true
JAGETS010000091.1	Protein Homology	CDS	2587	3108	.	+	0	ID=cds-J4731_23600;Parent=gene-J4731_23600;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000332883.1;locus_tag=J4731_23600;product=hypothetical protein;pseudo=true;transl_table=11
JAGETS010000091.1	Genbank	gene	3158	3373	.	+	.	ID=gene-J4731_23605;Name=J4731_23605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_23605
JAGETS010000091.1	GeneMarkS-2+	CDS	3158	3373	.	+	0	ID=cds-MBO1929931.1;Parent=gene-J4731_23605;Dbxref=NCBI_GP:MBO1929931.1;Name=MBO1929931.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_23605;product=hypothetical protein;protein_id=MBO1929931.1;transl_table=11
JAGETS010000091.1	Genbank	gene	3492	3734	.	+	.	ID=gene-J4731_23610;Name=J4731_23610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_23610
JAGETS010000091.1	GeneMarkS-2+	CDS	3492	3734	.	+	0	ID=cds-MBO1929932.1;Parent=gene-J4731_23610;Dbxref=NCBI_GP:MBO1929932.1;Name=MBO1929932.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_23610;product=hypothetical protein;protein_id=MBO1929932.1;transl_table=11
JAGETS010000091.1	Genbank	gene	4223	4606	.	+	.	ID=gene-J4731_23615;Name=J4731_23615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_23615
JAGETS010000091.1	GeneMarkS-2+	CDS	4223	4606	.	+	0	ID=cds-MBO1929933.1;Parent=gene-J4731_23615;Dbxref=NCBI_GP:MBO1929933.1;Name=MBO1929933.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_23615;product=hypothetical protein;protein_id=MBO1929933.1;transl_table=11
JAGETS010000091.1	Genbank	gene	4898	5245	.	+	.	ID=gene-J4731_23620;Name=J4731_23620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_23620
JAGETS010000091.1	GeneMarkS-2+	CDS	4898	5245	.	+	0	ID=cds-MBO1929934.1;Parent=gene-J4731_23620;Dbxref=NCBI_GP:MBO1929934.1;Name=MBO1929934.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_23620;product=hypothetical protein;protein_id=MBO1929934.1;transl_table=11
JAGETS010000091.1	Genbank	gene	5453	5590	.	+	.	ID=gene-J4731_23625;Name=J4731_23625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_23625
JAGETS010000091.1	GeneMarkS-2+	CDS	5453	5590	.	+	0	ID=cds-MBO1929935.1;Parent=gene-J4731_23625;Dbxref=NCBI_GP:MBO1929935.1;Name=MBO1929935.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_23625;product=hypothetical protein;protein_id=MBO1929935.1;transl_table=11
JAGETS010000091.1	Genbank	gene	5631	5858	.	+	.	ID=gene-J4731_23630;Name=J4731_23630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_23630
JAGETS010000091.1	GeneMarkS-2+	CDS	5631	5858	.	+	0	ID=cds-MBO1929936.1;Parent=gene-J4731_23630;Dbxref=NCBI_GP:MBO1929936.1;Name=MBO1929936.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_23630;product=hypothetical protein;protein_id=MBO1929936.1;transl_table=11
JAGETS010000091.1	Genbank	pseudogene	5861	9186	.	+	.	ID=gene-J4731_23635;Name=J4731_23635;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_23635;pseudo=true
JAGETS010000091.1	Protein Homology	CDS	5861	9186	.	+	0	ID=cds-J4731_23635;Parent=gene-J4731_23635;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004250884.1;locus_tag=J4731_23635;product=hypothetical protein;pseudo=true;transl_table=11
JAGETS010000091.1	Genbank	gene	9189	9458	.	-	.	ID=gene-J4731_23640;Name=J4731_23640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_23640
JAGETS010000091.1	GeneMarkS-2+	CDS	9189	9458	.	-	0	ID=cds-MBO1929937.1;Parent=gene-J4731_23640;Dbxref=NCBI_GP:MBO1929937.1;Name=MBO1929937.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_23640;product=hypothetical protein;protein_id=MBO1929937.1;transl_table=11
JAGETS010000091.1	Genbank	gene	9695	9904	.	+	.	ID=gene-J4731_23645;Name=J4731_23645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_23645
JAGETS010000091.1	GeneMarkS-2+	CDS	9695	9904	.	+	0	ID=cds-MBO1929938.1;Parent=gene-J4731_23645;Dbxref=NCBI_GP:MBO1929938.1;Name=MBO1929938.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_23645;product=hypothetical protein;protein_id=MBO1929938.1;transl_table=11
JAGETS010000091.1	Genbank	pseudogene	10041	10291	.	-	.	ID=gene-J4731_23650;Name=J4731_23650;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_23650;pseudo=true
JAGETS010000091.1	Protein Homology	CDS	10041	10291	.	-	0	ID=cds-J4731_23650;Parent=gene-J4731_23650;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004253782.1;locus_tag=J4731_23650;product=hypothetical protein;pseudo=true;transl_table=11
JAGETS010000091.1	Genbank	gene	10771	10983	.	+	.	ID=gene-J4731_23655;Name=J4731_23655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_23655
JAGETS010000091.1	GeneMarkS-2+	CDS	10771	10983	.	+	0	ID=cds-MBO1929939.1;Parent=gene-J4731_23655;Dbxref=NCBI_GP:MBO1929939.1;Name=MBO1929939.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_23655;product=hypothetical protein;protein_id=MBO1929939.1;transl_table=11
JAGETS010000091.1	Genbank	gene	10973	11182	.	+	.	ID=gene-J4731_23660;Name=J4731_23660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_23660
JAGETS010000091.1	GeneMarkS-2+	CDS	10973	11182	.	+	0	ID=cds-MBO1929940.1;Parent=gene-J4731_23660;Dbxref=NCBI_GP:MBO1929940.1;Name=MBO1929940.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_23660;product=hypothetical protein;protein_id=MBO1929940.1;transl_table=11
JAGETS010000091.1	Genbank	gene	11163	11435	.	+	.	ID=gene-J4731_23665;Name=J4731_23665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_23665
JAGETS010000091.1	Protein Homology	CDS	11163	11435	.	+	0	ID=cds-MBO1929941.1;Parent=gene-J4731_23665;Dbxref=NCBI_GP:MBO1929941.1;Name=MBO1929941.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000108377.1;locus_tag=J4731_23665;product=hypothetical protein;protein_id=MBO1929941.1;transl_table=11
JAGETS010000091.1	Genbank	gene	11619	11981	.	+	.	ID=gene-J4731_23670;Name=J4731_23670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_23670
JAGETS010000091.1	GeneMarkS-2+	CDS	11619	11981	.	+	0	ID=cds-MBO1929942.1;Parent=gene-J4731_23670;Dbxref=NCBI_GP:MBO1929942.1;Name=MBO1929942.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_23670;product=hypothetical protein;protein_id=MBO1929942.1;transl_table=11
JAGETS010000091.1	Genbank	gene	12583	12765	.	+	.	ID=gene-J4731_23675;Name=J4731_23675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_23675
JAGETS010000091.1	GeneMarkS-2+	CDS	12583	12765	.	+	0	ID=cds-MBO1929943.1;Parent=gene-J4731_23675;Dbxref=NCBI_GP:MBO1929943.1;Name=MBO1929943.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_23675;product=hypothetical protein;protein_id=MBO1929943.1;transl_table=11
JAGETS010000091.1	Genbank	pseudogene	13973	14224	.	+	.	ID=gene-J4731_23680;Name=J4731_23680;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_23680;pseudo=true
JAGETS010000091.1	Protein Homology	CDS	13973	14224	.	+	0	ID=cds-J4731_23680;Parent=gene-J4731_23680;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004253796.1;locus_tag=J4731_23680;product=phage holin family protein;pseudo=true;transl_table=11
JAGETS010000091.1	Genbank	pseudogene	14240	14614	.	+	.	ID=gene-J4731_23685;Name=J4731_23685;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_23685;pseudo=true
JAGETS010000091.1	Protein Homology	CDS	14240	14614	.	+	0	ID=cds-J4731_23685;Parent=gene-J4731_23685;Note=frameshifted%3B internal stop%3B incomplete%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007710822.1;locus_tag=J4731_23685;product=M15 family metallopeptidase;pseudo=true;transl_table=11
##sequence-region JAGETS010000092.1 1 17186
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=587
JAGETS010000092.1	Genbank	region	1	17186	.	+	.	ID=JAGETS010000092.1:1..17186;Dbxref=taxon:587;collected-by=NHLS;collection-date=2018;country=South Africa: Pretoria;gbkey=Src;isolation-source=stool;lat-lon=25.7479 S 28.2293 E;mol_type=genomic DNA;nat-host=porcine;strain=SG003
JAGETS010000092.1	Genbank	pseudogene	1	285	.	-	.	ID=gene-J4731_23690;Name=J4731_23690;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_23690;pseudo=true
JAGETS010000092.1	Protein Homology	CDS	1	285	.	-	0	ID=cds-J4731_23690;Parent=gene-J4731_23690;Note=frameshifted%3B incomplete%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004259949.1;locus_tag=J4731_23690;product=GntR family transcriptional regulator;pseudo=true;transl_table=11
JAGETS010000092.1	Genbank	pseudogene	678	1913	.	+	.	ID=gene-J4731_23695;Name=J4731_23695;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_23695;pseudo=true
JAGETS010000092.1	Protein Homology	CDS	678	1913	.	+	0	ID=cds-J4731_23695;Parent=gene-J4731_23695;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014656216.1;locus_tag=J4731_23695;product=divalent metal cation transporter;pseudo=true;transl_table=11
JAGETS010000092.1	Genbank	pseudogene	1928	2706	.	+	.	ID=gene-J4731_23700;Name=J4731_23700;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_23700;pseudo=true
JAGETS010000092.1	Protein Homology	CDS	1928	2706	.	+	0	ID=cds-J4731_23700;Parent=gene-J4731_23700;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004259962.1;locus_tag=J4731_23700;product=LamB/YcsF family protein;pseudo=true;transl_table=11
JAGETS010000092.1	Genbank	pseudogene	2703	3500	.	+	.	ID=gene-J4731_23705;Name=J4731_23705;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_23705;pseudo=true
JAGETS010000092.1	Protein Homology	CDS	2703	3500	.	+	0	ID=cds-J4731_23705;Parent=gene-J4731_23705;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004920961.1;locus_tag=J4731_23705;product=putative hydro-lyase;pseudo=true;transl_table=11
JAGETS010000092.1	Genbank	pseudogene	3510	5023	.	+	.	ID=gene-J4731_23710;Name=J4731_23710;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_23710;pseudo=true
JAGETS010000092.1	Protein Homology	CDS	3510	5023	.	+	0	ID=cds-J4731_23710;Parent=gene-J4731_23710;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013183375.1;locus_tag=J4731_23710;product=carboxyltransferase domain-containing protein;pseudo=true;transl_table=11
JAGETS010000092.1	Genbank	pseudogene	5120	6798	.	+	.	ID=gene-J4731_23715;Name=J4731_23715;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_23715;pseudo=true
JAGETS010000092.1	Protein Homology	CDS	5120	6798	.	+	0	ID=cds-J4731_23715;Parent=gene-J4731_23715;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015854954.1;locus_tag=J4731_23715;product=ATP-grasp domain-containing protein;pseudo=true;transl_table=11
JAGETS010000092.1	Genbank	pseudogene	6849	7116	.	-	.	ID=gene-J4731_23720;Name=J4731_23720;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_23720;pseudo=true
JAGETS010000092.1	Protein Homology	CDS	6849	7116	.	-	0	ID=cds-J4731_23720;Parent=gene-J4731_23720;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006660382.1;locus_tag=J4731_23720;product=hypothetical protein;pseudo=true;transl_table=11
JAGETS010000092.1	Genbank	pseudogene	7507	8077	.	+	.	ID=gene-J4731_23725;Name=J4731_23725;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_23725;pseudo=true
JAGETS010000092.1	Protein Homology	CDS	7507	8077	.	+	0	ID=cds-J4731_23725;Parent=gene-J4731_23725;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006815496.1;locus_tag=J4731_23725;product=DUF924 domain-containing protein;pseudo=true;transl_table=11
JAGETS010000092.1	Genbank	pseudogene	8074	8687	.	-	.	ID=gene-J4731_23730;Name=J4731_23730;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_23730;pseudo=true
JAGETS010000092.1	Protein Homology	CDS	8074	8687	.	-	0	ID=cds-J4731_23730;Parent=gene-J4731_23730;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004259987.1;locus_tag=J4731_23730;product=molecular chaperone;pseudo=true;transl_table=11
JAGETS010000092.1	Genbank	pseudogene	8841	9608	.	-	.	ID=gene-J4731_23735;Name=J4731_23735;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_23735;pseudo=true
JAGETS010000092.1	Protein Homology	CDS	8841	9608	.	-	0	ID=cds-J4731_23735;Parent=gene-J4731_23735;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192725.1;locus_tag=J4731_23735;product=dimethyl sulfoxide reductase anchor subunit;pseudo=true;transl_table=11
JAGETS010000092.1	Genbank	pseudogene	9610	10224	.	-	.	ID=gene-J4731_23740;Name=dmsB;gbkey=Gene;gene=dmsB;gene_biotype=pseudogene;locus_tag=J4731_23740;pseudo=true
JAGETS010000092.1	Protein Homology	CDS	9610	10224	.	-	0	ID=cds-J4731_23740;Parent=gene-J4731_23740;Note=frameshifted;gbkey=CDS;gene=dmsB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005183646.1;locus_tag=J4731_23740;product=dimethylsulfoxide reductase subunit B;pseudo=true;transl_table=11
JAGETS010000092.1	Genbank	pseudogene	10236	12641	.	-	.	ID=gene-J4731_23745;Name=J4731_23745;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_23745;pseudo=true
JAGETS010000092.1	Protein Homology	CDS	10236	12641	.	-	0	ID=cds-J4731_23745;Parent=gene-J4731_23745;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006661396.1;locus_tag=J4731_23745;product=molybdopterin-dependent oxidoreductase;pseudo=true;transl_table=11
JAGETS010000092.1	Genbank	pseudogene	12924	14179	.	-	.	ID=gene-J4731_23750;Name=J4731_23750;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_23750;pseudo=true
JAGETS010000092.1	Protein Homology	CDS	12924	14179	.	-	0	ID=cds-J4731_23750;Parent=gene-J4731_23750;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006660388.1;locus_tag=J4731_23750;product=mechanosensitive ion channel family protein;pseudo=true;transl_table=11
JAGETS010000092.1	Genbank	pseudogene	14570	15030	.	+	.	ID=gene-J4731_23755;Name=J4731_23755;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_23755;pseudo=true
JAGETS010000092.1	Protein Homology	CDS	14570	15030	.	+	0	ID=cds-J4731_23755;Parent=gene-J4731_23755;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004941297.1;locus_tag=J4731_23755;product=hypothetical protein;pseudo=true;transl_table=11
JAGETS010000092.1	Genbank	pseudogene	15475	16276	.	+	.	ID=gene-J4731_23760;Name=J4731_23760;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_23760;pseudo=true
JAGETS010000092.1	Protein Homology	CDS	15475	16276	.	+	0	ID=cds-J4731_23760;Parent=gene-J4731_23760;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019844974.1;locus_tag=J4731_23760;product=D-amino-acid transaminase;pseudo=true;transl_table=11
JAGETS010000092.1	Genbank	pseudogene	16336	16902	.	-	.	ID=gene-J4731_23765;Name=J4731_23765;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_23765;pseudo=true
JAGETS010000092.1	Protein Homology	CDS	16336	16902	.	-	0	ID=cds-J4731_23765;Parent=gene-J4731_23765;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006660390.1;locus_tag=J4731_23765;product=cysteine hydrolase;pseudo=true;transl_table=11
##sequence-region JAGETS010000093.1 1 15548
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=587
JAGETS010000093.1	Genbank	region	1	15548	.	+	.	ID=JAGETS010000093.1:1..15548;Dbxref=taxon:587;collected-by=NHLS;collection-date=2018;country=South Africa: Pretoria;gbkey=Src;isolation-source=stool;lat-lon=25.7479 S 28.2293 E;mol_type=genomic DNA;nat-host=porcine;strain=SG003
JAGETS010000093.1	Genbank	pseudogene	1	287	.	-	.	ID=gene-J4731_23770;Name=J4731_23770;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_23770;pseudo=true
JAGETS010000093.1	Protein Homology	CDS	1	287	.	-	0	ID=cds-J4731_23770;Parent=gene-J4731_23770;Note=Fe-S ferrodoxin type component%3B participates in the periplasmic electron-transferring activity of hydrogenase 2%3B frameshifted%3B incomplete%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012135129.1;locus_tag=J4731_23770;product=hydrogenase 2 protein HybA;pseudo=true;transl_table=11
JAGETS010000093.1	Genbank	pseudogene	410	1517	.	-	.	ID=gene-J4731_23775;Name=J4731_23775;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_23775;pseudo=true
JAGETS010000093.1	Protein Homology	CDS	410	1517	.	-	0	ID=cds-J4731_23775;Parent=gene-J4731_23775;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000578724.1;locus_tag=J4731_23775;product=hydrogenase small subunit;pseudo=true;transl_table=11
JAGETS010000093.1	Genbank	pseudogene	2052	4343	.	-	.	ID=gene-J4731_23780;Name=hypF;gbkey=Gene;gene=hypF;gene_biotype=pseudogene;locus_tag=J4731_23780;pseudo=true
JAGETS010000093.1	Protein Homology	CDS	2052	4343	.	-	0	ID=cds-J4731_23780;Parent=gene-J4731_23780;Note=frameshifted%3B internal stop;gbkey=CDS;gene=hypF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006662935.1;locus_tag=J4731_23780;product=carbamoyltransferase HypF;pseudo=true;transl_table=11
JAGETS010000093.1	Genbank	pseudogene	4951	5740	.	+	.	ID=gene-J4731_23785;Name=J4731_23785;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_23785;pseudo=true
JAGETS010000093.1	Protein Homology	CDS	4951	5740	.	+	0	ID=cds-J4731_23785;Parent=gene-J4731_23785;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001376701.1;locus_tag=J4731_23785;product=MBL fold metallo-hydrolase;pseudo=true;transl_table=11
JAGETS010000093.1	Genbank	pseudogene	6095	6398	.	+	.	ID=gene-J4731_23790;Name=J4731_23790;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_23790;pseudo=true
JAGETS010000093.1	Protein Homology	CDS	6095	6398	.	+	0	ID=cds-J4731_23790;Parent=gene-J4731_23790;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002443364.1;locus_tag=J4731_23790;product=non-heme iron oxygenase ferredoxin subunit;pseudo=true;transl_table=11
JAGETS010000093.1	Genbank	pseudogene	6412	6719	.	+	.	ID=gene-J4731_23795;Name=J4731_23795;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_23795;pseudo=true
JAGETS010000093.1	Protein Homology	CDS	6412	6719	.	+	0	ID=cds-J4731_23795;Parent=gene-J4731_23795;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004918964.1;locus_tag=J4731_23795;product=hypothetical protein;pseudo=true;transl_table=11
JAGETS010000093.1	Genbank	pseudogene	6818	7809	.	+	.	ID=gene-J4731_23800;Name=J4731_23800;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_23800;pseudo=true
JAGETS010000093.1	Protein Homology	CDS	6818	7809	.	+	0	ID=cds-J4731_23800;Parent=gene-J4731_23800;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003860047.1;locus_tag=J4731_23800;product=Rieske 2Fe-2S domain-containing protein;pseudo=true;transl_table=11
JAGETS010000093.1	Genbank	pseudogene	7802	8520	.	+	.	ID=gene-J4731_23805;Name=J4731_23805;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_23805;pseudo=true
JAGETS010000093.1	Protein Homology	CDS	7802	8520	.	+	0	ID=cds-J4731_23805;Parent=gene-J4731_23805;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004918960.1;locus_tag=J4731_23805;product=SDR family oxidoreductase;pseudo=true;transl_table=11
JAGETS010000093.1	Genbank	pseudogene	8580	9324	.	+	.	ID=gene-J4731_23810;Name=J4731_23810;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_23810;pseudo=true
JAGETS010000093.1	Protein Homology	CDS	8580	9324	.	+	0	ID=cds-J4731_23810;Parent=gene-J4731_23810;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017374504.1;locus_tag=J4731_23810;product=helix-turn-helix domain-containing protein;pseudo=true;transl_table=11
JAGETS010000093.1	Genbank	pseudogene	9439	10312	.	+	.	ID=gene-J4731_23815;Name=J4731_23815;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_23815;pseudo=true
JAGETS010000093.1	Protein Homology	CDS	9439	10312	.	+	0	ID=cds-J4731_23815;Parent=gene-J4731_23815;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013814437.1;locus_tag=J4731_23815;product=glyoxalase;pseudo=true;transl_table=11
JAGETS010000093.1	Genbank	pseudogene	10359	11560	.	+	.	ID=gene-J4731_23820;Name=J4731_23820;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_23820;pseudo=true
JAGETS010000093.1	Protein Homology	CDS	10359	11560	.	+	0	ID=cds-J4731_23820;Parent=gene-J4731_23820;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013814436.1;locus_tag=J4731_23820;product=FAD-dependent oxidoreductase;pseudo=true;transl_table=11
JAGETS010000093.1	Genbank	pseudogene	11582	12979	.	+	.	ID=gene-J4731_23825;Name=J4731_23825;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_23825;pseudo=true
JAGETS010000093.1	Protein Homology	CDS	11582	12979	.	+	0	ID=cds-J4731_23825;Parent=gene-J4731_23825;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012146664.1;locus_tag=J4731_23825;product=MFS transporter;pseudo=true;transl_table=11
JAGETS010000093.1	Genbank	pseudogene	12862	13386	.	+	.	ID=gene-J4731_23830;Name=J4731_23830;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_23830;pseudo=true
JAGETS010000093.1	Protein Homology	CDS	12862	13386	.	+	0	ID=cds-J4731_23830;Parent=gene-J4731_23830;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228731.1;locus_tag=J4731_23830;product=cupin domain-containing protein;pseudo=true;transl_table=11
JAGETS010000093.1	Genbank	pseudogene	13437	14248	.	+	.	ID=gene-J4731_23835;Name=J4731_23835;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_23835;pseudo=true
JAGETS010000093.1	Protein Homology	CDS	13437	14248	.	+	0	ID=cds-J4731_23835;Parent=gene-J4731_23835;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006321012.1;locus_tag=J4731_23835;product=alpha/beta hydrolase;pseudo=true;transl_table=11
JAGETS010000093.1	Genbank	pseudogene	14245	15033	.	+	.	ID=gene-J4731_23840;Name=J4731_23840;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_23840;pseudo=true
JAGETS010000093.1	Protein Homology	CDS	14245	15033	.	+	0	ID=cds-J4731_23840;Parent=gene-J4731_23840;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228729.1;locus_tag=J4731_23840;product=SDR family oxidoreductase;pseudo=true;transl_table=11
JAGETS010000093.1	Genbank	gene	15042	15227	.	+	.	ID=gene-J4731_23845;Name=J4731_23845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_23845
JAGETS010000093.1	GeneMarkS-2+	CDS	15042	15227	.	+	0	ID=cds-MBO1929944.1;Parent=gene-J4731_23845;Dbxref=NCBI_GP:MBO1929944.1;Name=MBO1929944.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_23845;product=hypothetical protein;protein_id=MBO1929944.1;transl_table=11
##sequence-region JAGETS010000094.1 1 13401
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=587
JAGETS010000094.1	Genbank	region	1	13401	.	+	.	ID=JAGETS010000094.1:1..13401;Dbxref=taxon:587;collected-by=NHLS;collection-date=2018;country=South Africa: Pretoria;gbkey=Src;isolation-source=stool;lat-lon=25.7479 S 28.2293 E;mol_type=genomic DNA;nat-host=porcine;strain=SG003
JAGETS010000094.1	Genbank	pseudogene	310	938	.	-	.	ID=gene-J4731_23850;Name=dsbA;gbkey=Gene;gene=dsbA;gene_biotype=pseudogene;locus_tag=J4731_23850;pseudo=true
JAGETS010000094.1	Protein Homology	CDS	310	938	.	-	0	ID=cds-J4731_23850;Parent=gene-J4731_23850;Note=frameshifted%3B internal stop;gbkey=CDS;gene=dsbA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004923800.1;locus_tag=J4731_23850;product=thiol:disulfide interchange protein DsbA;pseudo=true;transl_table=11
JAGETS010000094.1	Genbank	pseudogene	892	1883	.	-	.	ID=gene-J4731_23855;Name=J4731_23855;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_23855;pseudo=true
JAGETS010000094.1	Protein Homology	CDS	892	1883	.	-	0	ID=cds-J4731_23855;Parent=gene-J4731_23855;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010848508.1;locus_tag=J4731_23855;product=serine/threonine protein kinase;pseudo=true;transl_table=11
JAGETS010000094.1	Genbank	pseudogene	1958	2221	.	-	.	ID=gene-J4731_23860;Name=J4731_23860;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_23860;pseudo=true
JAGETS010000094.1	Protein Homology	CDS	1958	2221	.	-	0	ID=cds-J4731_23860;Parent=gene-J4731_23860;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005968263.1;locus_tag=J4731_23860;product=YihD family protein;pseudo=true;transl_table=11
JAGETS010000094.1	Genbank	pseudogene	2491	3043	.	+	.	ID=gene-J4731_23865;Name=mobA;gbkey=Gene;gene=mobA;gene_biotype=pseudogene;locus_tag=J4731_23865;pseudo=true
JAGETS010000094.1	Protein Homology	CDS	2491	3043	.	+	0	ID=cds-J4731_23865;Parent=gene-J4731_23865;Note=frameshifted;gbkey=CDS;gene=mobA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002381867.1;locus_tag=J4731_23865;product=molybdenum cofactor guanylyltransferase MobA;pseudo=true;transl_table=11
JAGETS010000094.1	Genbank	gene	3079	3324	.	+	.	ID=gene-J4731_23870;Name=J4731_23870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_23870
JAGETS010000094.1	Protein Homology	CDS	3079	3324	.	+	0	ID=cds-MBO1929945.1;Parent=gene-J4731_23870;Dbxref=NCBI_GP:MBO1929945.1;Name=MBO1929945.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015181.1;locus_tag=J4731_23870;product=molybdopterin-guanine dinucleotide biosynthesis protein MobB;protein_id=MBO1929945.1;transl_table=11
JAGETS010000094.1	Genbank	pseudogene	3601	4294	.	+	.	ID=gene-J4731_23875;Name=J4731_23875;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_23875;pseudo=true
JAGETS010000094.1	Protein Homology	CDS	3601	4294	.	+	0	ID=cds-J4731_23875;Parent=gene-J4731_23875;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006659570.1;locus_tag=J4731_23875;product=YafY family transcriptional regulator;pseudo=true;transl_table=11
JAGETS010000094.1	Genbank	pseudogene	4344	4947	.	+	.	ID=gene-J4731_23880;Name=J4731_23880;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_23880;pseudo=true
JAGETS010000094.1	Protein Homology	CDS	4344	4947	.	+	0	ID=cds-J4731_23880;Parent=gene-J4731_23880;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004262587.1;locus_tag=J4731_23880;product=glutathione S-transferase family protein;pseudo=true;transl_table=11
JAGETS010000094.1	Genbank	pseudogene	4997	6342	.	-	.	ID=gene-J4731_23885;Name=gorA;gbkey=Gene;gene=gorA;gene_biotype=pseudogene;locus_tag=J4731_23885;pseudo=true
JAGETS010000094.1	Protein Homology	CDS	4997	6342	.	-	0	ID=cds-J4731_23885;Parent=gene-J4731_23885;Note=frameshifted%3B internal stop;gbkey=CDS;gene=gorA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003861215.1;locus_tag=J4731_23885;product=glutathione-disulfide reductase;pseudo=true;transl_table=11
JAGETS010000094.1	Genbank	pseudogene	6479	7317	.	-	.	ID=gene-J4731_23890;Name=J4731_23890;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_23890;pseudo=true
JAGETS010000094.1	Protein Homology	CDS	6479	7317	.	-	0	ID=cds-J4731_23890;Parent=gene-J4731_23890;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229320.1;locus_tag=J4731_23890;product=23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ;pseudo=true;transl_table=11
JAGETS010000094.1	Genbank	pseudogene	7608	7949	.	+	.	ID=gene-J4731_23895;Name=J4731_23895;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_23895;pseudo=true
JAGETS010000094.1	Protein Homology	CDS	7608	7949	.	+	0	ID=cds-J4731_23895;Parent=gene-J4731_23895;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004923780.1;locus_tag=J4731_23895;product=DUF1090 domain-containing protein;pseudo=true;transl_table=11
JAGETS010000094.1	Genbank	pseudogene	8154	9131	.	+	.	ID=gene-J4731_23900;Name=yhjD;gbkey=Gene;gene=yhjD;gene_biotype=pseudogene;locus_tag=J4731_23900;pseudo=true
JAGETS010000094.1	Protein Homology	CDS	8154	9131	.	+	0	ID=cds-J4731_23900;Parent=gene-J4731_23900;Note=frameshifted%3B internal stop;gbkey=CDS;gene=yhjD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010615726.1;locus_tag=J4731_23900;product=inner membrane protein YhjD;pseudo=true;transl_table=11
JAGETS010000094.1	Genbank	pseudogene	9186	10236	.	-	.	ID=gene-J4731_23905;Name=J4731_23905;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_23905;pseudo=true
JAGETS010000094.1	Protein Homology	CDS	9186	10236	.	-	0	ID=cds-J4731_23905;Parent=gene-J4731_23905;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006663051.1;locus_tag=J4731_23905;product=nitronate monooxygenase;pseudo=true;transl_table=11
JAGETS010000094.1	Genbank	pseudogene	10444	11434	.	+	.	ID=gene-J4731_23910;Name=J4731_23910;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_23910;pseudo=true
JAGETS010000094.1	Protein Homology	CDS	10444	11434	.	+	0	ID=cds-J4731_23910;Parent=gene-J4731_23910;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004262614.1;locus_tag=J4731_23910;product=beta-lactamase family protein;pseudo=true;transl_table=11
JAGETS010000094.1	Genbank	pseudogene	11466	12984	.	-	.	ID=gene-J4731_23915;Name=J4731_23915;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_23915;pseudo=true
JAGETS010000094.1	Protein Homology	CDS	11466	12984	.	-	0	ID=cds-J4731_23915;Parent=gene-J4731_23915;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004923762.1;locus_tag=J4731_23915;product=insulinase family protein;pseudo=true;transl_table=11
JAGETS010000094.1	Genbank	gene	13146	13401	.	-	.	ID=gene-J4731_23920;Name=J4731_23920;end_range=13401,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_23920;partial=true
JAGETS010000094.1	Protein Homology	CDS	13146	13401	.	-	1	ID=cds-MBO1929946.1;Parent=gene-J4731_23920;Dbxref=NCBI_GP:MBO1929946.1;Name=MBO1929946.1;end_range=13401,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006659581.1;locus_tag=J4731_23920;partial=true;product=HAMP domain-containing protein;protein_id=MBO1929946.1;transl_table=11
##sequence-region JAGETS010000095.1 1 3983
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=587
JAGETS010000095.1	Genbank	region	1	3983	.	+	.	ID=JAGETS010000095.1:1..3983;Dbxref=taxon:587;collected-by=NHLS;collection-date=2018;country=South Africa: Pretoria;gbkey=Src;isolation-source=stool;lat-lon=25.7479 S 28.2293 E;mol_type=genomic DNA;nat-host=porcine;strain=SG003
JAGETS010000095.1	Genbank	pseudogene	906	1313	.	+	.	ID=gene-J4731_23925;Name=J4731_23925;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_23925;pseudo=true
JAGETS010000095.1	Protein Homology	CDS	906	1313	.	+	0	ID=cds-J4731_23925;Parent=gene-J4731_23925;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000874179.1;locus_tag=J4731_23925;product=hypothetical protein;pseudo=true;transl_table=11
JAGETS010000095.1	Genbank	gene	1637	1825	.	+	.	ID=gene-J4731_23930;Name=J4731_23930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_23930
JAGETS010000095.1	GeneMarkS-2+	CDS	1637	1825	.	+	0	ID=cds-MBO1929947.1;Parent=gene-J4731_23930;Dbxref=NCBI_GP:MBO1929947.1;Name=MBO1929947.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_23930;product=hypothetical protein;protein_id=MBO1929947.1;transl_table=11
JAGETS010000095.1	Genbank	gene	1845	2123	.	+	.	ID=gene-J4731_23935;Name=J4731_23935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_23935
JAGETS010000095.1	GeneMarkS-2+	CDS	1845	2123	.	+	0	ID=cds-MBO1929948.1;Parent=gene-J4731_23935;Dbxref=NCBI_GP:MBO1929948.1;Name=MBO1929948.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_23935;product=hypothetical protein;protein_id=MBO1929948.1;transl_table=11
JAGETS010000095.1	Genbank	pseudogene	2152	2609	.	-	.	ID=gene-J4731_23940;Name=J4731_23940;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_23940;pseudo=true
JAGETS010000095.1	Protein Homology	CDS	2152	2609	.	-	0	ID=cds-J4731_23940;Parent=gene-J4731_23940;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000043122.1;locus_tag=J4731_23940;product=hypothetical protein;pseudo=true;transl_table=11
JAGETS010000095.1	Genbank	gene	3169	3321	.	-	.	ID=gene-J4731_23945;Name=J4731_23945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_23945
JAGETS010000095.1	GeneMarkS-2+	CDS	3169	3321	.	-	0	ID=cds-MBO1929949.1;Parent=gene-J4731_23945;Dbxref=NCBI_GP:MBO1929949.1;Name=MBO1929949.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_23945;product=hypothetical protein;protein_id=MBO1929949.1;transl_table=11
JAGETS010000095.1	Genbank	pseudogene	3741	3904	.	-	.	ID=gene-J4731_23950;Name=J4731_23950;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_23950;pseudo=true
JAGETS010000095.1	Protein Homology	CDS	3741	3904	.	-	0	ID=cds-J4731_23950;Parent=gene-J4731_23950;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001041627.1;locus_tag=J4731_23950;product=Rop family plasmid primer RNA-binding protein;pseudo=true;transl_table=11
##sequence-region JAGETS010000096.1 1 7348
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=587
JAGETS010000096.1	Genbank	region	1	7348	.	+	.	ID=JAGETS010000096.1:1..7348;Dbxref=taxon:587;collected-by=NHLS;collection-date=2018;country=South Africa: Pretoria;gbkey=Src;isolation-source=stool;lat-lon=25.7479 S 28.2293 E;mol_type=genomic DNA;nat-host=porcine;strain=SG003
JAGETS010000096.1	Genbank	pseudogene	1479	2036	.	+	.	ID=gene-J4731_23955;Name=J4731_23955;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_23955;pseudo=true
JAGETS010000096.1	Protein Homology	CDS	1479	2036	.	+	0	ID=cds-J4731_23955;Parent=gene-J4731_23955;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001749520.1;locus_tag=J4731_23955;product=hypothetical protein;pseudo=true;transl_table=11
JAGETS010000096.1	Genbank	pseudogene	2065	2525	.	-	.	ID=gene-J4731_23960;Name=J4731_23960;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_23960;pseudo=true
JAGETS010000096.1	Protein Homology	CDS	2065	2525	.	-	0	ID=cds-J4731_23960;Parent=gene-J4731_23960;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000043122.1;locus_tag=J4731_23960;product=hypothetical protein;pseudo=true;transl_table=11
JAGETS010000096.1	Genbank	pseudogene	3207	3484	.	+	.	ID=gene-J4731_23965;Name=J4731_23965;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_23965;pseudo=true
JAGETS010000096.1	Protein Homology	CDS	3207	3484	.	+	0	ID=cds-J4731_23965;Parent=gene-J4731_23965;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001682433.1;locus_tag=J4731_23965;product=hypothetical protein;pseudo=true;transl_table=11
JAGETS010000096.1	Genbank	pseudogene	3665	3858	.	-	.	ID=gene-J4731_23970;Name=J4731_23970;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_23970;pseudo=true
JAGETS010000096.1	Protein Homology	CDS	3665	3858	.	-	0	ID=cds-J4731_23970;Parent=gene-J4731_23970;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001041627.1;locus_tag=J4731_23970;product=Rop family plasmid primer RNA-binding protein;pseudo=true;transl_table=11
JAGETS010000096.1	Genbank	pseudogene	4923	5306	.	+	.	ID=gene-J4731_23975;Name=J4731_23975;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_23975;pseudo=true
JAGETS010000096.1	Protein Homology	CDS	4923	5306	.	+	0	ID=cds-J4731_23975;Parent=gene-J4731_23975;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015959181.1;locus_tag=J4731_23975;product=hypothetical protein;pseudo=true;transl_table=11
JAGETS010000096.1	Genbank	gene	5559	6116	.	+	.	ID=gene-J4731_23980;Name=J4731_23980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_23980
JAGETS010000096.1	Protein Homology	CDS	5559	6116	.	+	0	ID=cds-MBO1929950.1;Parent=gene-J4731_23980;Dbxref=NCBI_GP:MBO1929950.1;Name=MBO1929950.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001749520.1;locus_tag=J4731_23980;product=hypothetical protein;protein_id=MBO1929950.1;transl_table=11
JAGETS010000096.1	Genbank	gene	7057	7140	.	-	.	ID=gene-J4731_23985;Name=J4731_23985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_23985
JAGETS010000096.1	Protein Homology	CDS	7057	7140	.	-	0	ID=cds-MBO1929951.1;Parent=gene-J4731_23985;Dbxref=NCBI_GP:MBO1929951.1;Name=MBO1929951.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007772075.1;locus_tag=J4731_23985;product=replication initiation protein;protein_id=MBO1929951.1;transl_table=11
##sequence-region JAGETS010000097.1 1 4074
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=587
JAGETS010000097.1	Genbank	region	1	4074	.	+	.	ID=JAGETS010000097.1:1..4074;Dbxref=taxon:587;collected-by=NHLS;collection-date=2018;country=South Africa: Pretoria;gbkey=Src;isolation-source=stool;lat-lon=25.7479 S 28.2293 E;mol_type=genomic DNA;nat-host=porcine;strain=SG003
JAGETS010000097.1	Genbank	gene	1	217	.	+	.	ID=gene-J4731_23990;Name=J4731_23990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_23990;partial=true;start_range=.,1
JAGETS010000097.1	GeneMarkS-2+	CDS	1	217	.	+	1	ID=cds-MBO1929952.1;Parent=gene-J4731_23990;Dbxref=NCBI_GP:MBO1929952.1;Name=MBO1929952.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=J4731_23990;partial=true;product=hypothetical protein;protein_id=MBO1929952.1;start_range=.,1;transl_table=11
JAGETS010000097.1	Genbank	gene	397	591	.	-	.	ID=gene-J4731_23995;Name=J4731_23995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_23995
JAGETS010000097.1	Protein Homology	CDS	397	591	.	-	0	ID=cds-MBO1929953.1;Parent=gene-J4731_23995;Dbxref=NCBI_GP:MBO1929953.1;Name=MBO1929953.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001041627.1;locus_tag=J4731_23995;product=Rop family plasmid primer RNA-binding protein;protein_id=MBO1929953.1;transl_table=11
JAGETS010000097.1	Genbank	pseudogene	1686	2060	.	+	.	ID=gene-J4731_24000;Name=J4731_24000;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_24000;pseudo=true
JAGETS010000097.1	Protein Homology	CDS	1686	2060	.	+	0	ID=cds-J4731_24000;Parent=gene-J4731_24000;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015959181.1;locus_tag=J4731_24000;product=hypothetical protein;pseudo=true;transl_table=11
JAGETS010000097.1	Genbank	pseudogene	2316	2871	.	+	.	ID=gene-J4731_24005;Name=J4731_24005;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_24005;pseudo=true
JAGETS010000097.1	Protein Homology	CDS	2316	2871	.	+	0	ID=cds-J4731_24005;Parent=gene-J4731_24005;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001749520.1;locus_tag=J4731_24005;product=hypothetical protein;pseudo=true;transl_table=11
##sequence-region JAGETS010000098.1 1 28799
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=587
JAGETS010000098.1	Genbank	region	1	28799	.	+	.	ID=JAGETS010000098.1:1..28799;Dbxref=taxon:587;collected-by=NHLS;collection-date=2018;country=South Africa: Pretoria;gbkey=Src;isolation-source=stool;lat-lon=25.7479 S 28.2293 E;mol_type=genomic DNA;nat-host=porcine;strain=SG003
JAGETS010000098.1	Genbank	pseudogene	1	780	.	-	.	ID=gene-J4731_24010;Name=dprA;gbkey=Gene;gene=dprA;gene_biotype=pseudogene;locus_tag=J4731_24010;pseudo=true
JAGETS010000098.1	Protein Homology	CDS	1	780	.	-	0	ID=cds-J4731_24010;Parent=gene-J4731_24010;Note=frameshifted%3B internal stop%3B incomplete%3B missing C-terminus;gbkey=CDS;gene=dprA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004265514.1;locus_tag=J4731_24010;product=DNA-processing protein DprA;pseudo=true;transl_table=11
JAGETS010000098.1	Genbank	pseudogene	903	1414	.	+	.	ID=gene-J4731_24015;Name=def;gbkey=Gene;gene=def;gene_biotype=pseudogene;locus_tag=J4731_24015;pseudo=true
JAGETS010000098.1	Protein Homology	CDS	903	1414	.	+	0	ID=cds-J4731_24015;Parent=gene-J4731_24015;Note=frameshifted%3B internal stop;gbkey=CDS;gene=def;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010287013.1;locus_tag=J4731_24015;product=peptide deformylase;pseudo=true;transl_table=11
JAGETS010000098.1	Genbank	pseudogene	1525	2377	.	+	.	ID=gene-J4731_24020;Name=fmt;gbkey=Gene;gene=fmt;gene_biotype=pseudogene;locus_tag=J4731_24020;pseudo=true
JAGETS010000098.1	Protein Homology	CDS	1525	2377	.	+	0	ID=cds-J4731_24020;Parent=gene-J4731_24020;Note=frameshifted;gbkey=CDS;gene=fmt;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016930317.1;locus_tag=J4731_24020;product=methionyl-tRNA formyltransferase;pseudo=true;transl_table=11
JAGETS010000098.1	Genbank	pseudogene	2447	3735	.	+	.	ID=gene-J4731_24025;Name=rsmB;gbkey=Gene;gene=rsmB;gene_biotype=pseudogene;locus_tag=J4731_24025;pseudo=true
JAGETS010000098.1	Protein Homology	CDS	2447	3735	.	+	0	ID=cds-J4731_24025;Parent=gene-J4731_24025;Note=frameshifted;gbkey=CDS;gene=rsmB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014657273.1;locus_tag=J4731_24025;product=16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB;pseudo=true;transl_table=11
JAGETS010000098.1	Genbank	pseudogene	3762	5131	.	+	.	ID=gene-J4731_24030;Name=trkA;gbkey=Gene;gene=trkA;gene_biotype=pseudogene;locus_tag=J4731_24030;pseudo=true
JAGETS010000098.1	Protein Homology	CDS	3762	5131	.	+	0	ID=cds-J4731_24030;Parent=gene-J4731_24030;Note=frameshifted;gbkey=CDS;gene=trkA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004125888.1;locus_tag=J4731_24030;product=Trk system potassium transporter TrkA;pseudo=true;transl_table=11
JAGETS010000098.1	Genbank	pseudogene	5236	5659	.	+	.	ID=gene-J4731_24035;Name=mscL;gbkey=Gene;gene=mscL;gene_biotype=pseudogene;locus_tag=J4731_24035;pseudo=true
JAGETS010000098.1	Protein Homology	CDS	5236	5659	.	+	0	ID=cds-J4731_24035;Parent=gene-J4731_24035;Note=frameshifted;gbkey=CDS;gene=mscL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246937.1;locus_tag=J4731_24035;product=large-conductance mechanosensitive channel protein MscL;pseudo=true;transl_table=11
JAGETS010000098.1	Genbank	pseudogene	5639	5823	.	-	.	ID=gene-J4731_24040;Name=arfA;gbkey=Gene;gene=arfA;gene_biotype=pseudogene;locus_tag=J4731_24040;pseudo=true
JAGETS010000098.1	Protein Homology	CDS	5639	5823	.	-	0	ID=cds-J4731_24040;Parent=gene-J4731_24040;Note=frameshifted;gbkey=CDS;gene=arfA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004926423.1;locus_tag=J4731_24040;product=ribosome alternative rescue factor ArfA;pseudo=true;transl_table=11
JAGETS010000098.1	Genbank	pseudogene	5857	6270	.	-	.	ID=gene-J4731_24045;Name=zntR;gbkey=Gene;gene=zntR;gene_biotype=pseudogene;locus_tag=J4731_24045;pseudo=true
JAGETS010000098.1	Protein Homology	CDS	5857	6270	.	-	0	ID=cds-J4731_24045;Parent=gene-J4731_24045;Note=frameshifted;gbkey=CDS;gene=zntR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008913901.1;locus_tag=J4731_24045;product=Zn(2+)-responsive transcriptional regulator;pseudo=true;transl_table=11
JAGETS010000098.1	Genbank	gene	6400	6786	.	-	.	ID=gene-J4731_24050;Name=rplQ;gbkey=Gene;gene=rplQ;gene_biotype=protein_coding;locus_tag=J4731_24050
JAGETS010000098.1	Protein Homology	CDS	6400	6786	.	-	0	ID=cds-MBO1929954.1;Parent=gene-J4731_24050;Dbxref=NCBI_GP:MBO1929954.1;Name=MBO1929954.1;gbkey=CDS;gene=rplQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312186.1;locus_tag=J4731_24050;product=50S ribosomal protein L17;protein_id=MBO1929954.1;transl_table=11
JAGETS010000098.1	Genbank	pseudogene	6824	7809	.	-	.	ID=gene-J4731_24055;Name=rpoA;gbkey=Gene;gene=rpoA;gene_biotype=pseudogene;locus_tag=J4731_24055;pseudo=true
JAGETS010000098.1	Protein Homology	CDS	6824	7809	.	-	0	ID=cds-J4731_24055;Parent=gene-J4731_24055;Note=frameshifted;gbkey=CDS;gene=rpoA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005970247.1;locus_tag=J4731_24055;product=DNA-directed RNA polymerase subunit alpha;pseudo=true;transl_table=11
JAGETS010000098.1	Genbank	pseudogene	7835	8453	.	-	.	ID=gene-J4731_24060;Name=rpsD;gbkey=Gene;gene=rpsD;gene_biotype=pseudogene;locus_tag=J4731_24060;pseudo=true
JAGETS010000098.1	Protein Homology	CDS	7835	8453	.	-	0	ID=cds-J4731_24060;Parent=gene-J4731_24060;Note=frameshifted;gbkey=CDS;gene=rpsD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004410410.1;locus_tag=J4731_24060;product=30S ribosomal protein S4;pseudo=true;transl_table=11
JAGETS010000098.1	Genbank	pseudogene	8504	8859	.	-	.	ID=gene-J4731_24065;Name=rpsK;gbkey=Gene;gene=rpsK;gene_biotype=pseudogene;locus_tag=J4731_24065;pseudo=true
JAGETS010000098.1	Protein Homology	CDS	8504	8859	.	-	0	ID=cds-J4731_24065;Parent=gene-J4731_24065;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;gene=rpsK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000101799.1;locus_tag=J4731_24065;product=30S ribosomal protein S11;pseudo=true;transl_table=11
JAGETS010000098.1	Genbank	gene	8889	9245	.	-	.	ID=gene-J4731_24070;Name=rpsM;gbkey=Gene;gene=rpsM;gene_biotype=protein_coding;locus_tag=J4731_24070
JAGETS010000098.1	Protein Homology	CDS	8889	9245	.	-	0	ID=cds-MBO1929955.1;Parent=gene-J4731_24070;Dbxref=NCBI_GP:MBO1929955.1;Name=MBO1929955.1;gbkey=CDS;gene=rpsM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019935869.1;locus_tag=J4731_24070;product=30S ribosomal protein S13;protein_id=MBO1929955.1;transl_table=11
JAGETS010000098.1	Genbank	gene	9384	9500	.	-	.	ID=gene-J4731_24075;Name=rpmJ;gbkey=Gene;gene=rpmJ;gene_biotype=protein_coding;locus_tag=J4731_24075
JAGETS010000098.1	Protein Homology	CDS	9384	9500	.	-	0	ID=cds-MBO1929956.1;Parent=gene-J4731_24075;Dbxref=NCBI_GP:MBO1929956.1;Name=MBO1929956.1;gbkey=CDS;gene=rpmJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006232360.1;locus_tag=J4731_24075;product=50S ribosomal protein L36;protein_id=MBO1929956.1;transl_table=11
JAGETS010000098.1	Genbank	pseudogene	9547	10869	.	-	.	ID=gene-J4731_24080;Name=secY;gbkey=Gene;gene=secY;gene_biotype=pseudogene;locus_tag=J4731_24080;pseudo=true
JAGETS010000098.1	Protein Homology	CDS	9547	10869	.	-	0	ID=cds-J4731_24080;Parent=gene-J4731_24080;Note=frameshifted;gbkey=CDS;gene=secY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004265481.1;locus_tag=J4731_24080;product=preprotein translocase subunit SecY;pseudo=true;transl_table=11
JAGETS010000098.1	Genbank	gene	10877	11311	.	-	.	ID=gene-J4731_24085;Name=rplO;gbkey=Gene;gene=rplO;gene_biotype=protein_coding;locus_tag=J4731_24085
JAGETS010000098.1	Protein Homology	CDS	10877	11311	.	-	0	ID=cds-MBO1929957.1;Parent=gene-J4731_24085;Dbxref=NCBI_GP:MBO1929957.1;Name=MBO1929957.1;gbkey=CDS;gene=rplO;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011095501.1;locus_tag=J4731_24085;product=50S ribosomal protein L15;protein_id=MBO1929957.1;transl_table=11
JAGETS010000098.1	Genbank	gene	11315	11494	.	-	.	ID=gene-J4731_24090;Name=rpmD;gbkey=Gene;gene=rpmD;gene_biotype=protein_coding;locus_tag=J4731_24090
JAGETS010000098.1	Protein Homology	CDS	11315	11494	.	-	0	ID=cds-MBO1929958.1;Parent=gene-J4731_24090;Dbxref=NCBI_GP:MBO1929958.1;Name=MBO1929958.1;gbkey=CDS;gene=rpmD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012147215.1;locus_tag=J4731_24090;product=50S ribosomal protein L30;protein_id=MBO1929958.1;transl_table=11
JAGETS010000098.1	Genbank	pseudogene	11501	11969	.	-	.	ID=gene-J4731_24095;Name=rpsE;gbkey=Gene;gene=rpsE;gene_biotype=pseudogene;locus_tag=J4731_24095;pseudo=true
JAGETS010000098.1	Protein Homology	CDS	11501	11969	.	-	0	ID=cds-J4731_24095;Parent=gene-J4731_24095;Note=frameshifted;gbkey=CDS;gene=rpsE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011109776.1;locus_tag=J4731_24095;product=30S ribosomal protein S5;pseudo=true;transl_table=11
JAGETS010000098.1	Genbank	pseudogene	12013	12364	.	-	.	ID=gene-J4731_24100;Name=rplR;gbkey=Gene;gene=rplR;gene_biotype=pseudogene;locus_tag=J4731_24100;pseudo=true
JAGETS010000098.1	Protein Homology	CDS	12013	12364	.	-	0	ID=cds-J4731_24100;Parent=gene-J4731_24100;Note=frameshifted;gbkey=CDS;gene=rplR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005970258.1;locus_tag=J4731_24100;product=50S ribosomal protein L18;pseudo=true;transl_table=11
JAGETS010000098.1	Genbank	pseudogene	12374	12867	.	-	.	ID=gene-J4731_24105;Name=rplF;gbkey=Gene;gene=rplF;gene_biotype=pseudogene;locus_tag=J4731_24105;pseudo=true
JAGETS010000098.1	Protein Homology	CDS	12374	12867	.	-	0	ID=cds-J4731_24105;Parent=gene-J4731_24105;Note=frameshifted;gbkey=CDS;gene=rplF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003031129.1;locus_tag=J4731_24105;product=50S ribosomal protein L6;pseudo=true;transl_table=11
JAGETS010000098.1	Genbank	pseudogene	12911	13302	.	-	.	ID=gene-J4731_24110;Name=rpsH;gbkey=Gene;gene=rpsH;gene_biotype=pseudogene;locus_tag=J4731_24110;pseudo=true
JAGETS010000098.1	Protein Homology	CDS	12911	13302	.	-	0	ID=cds-J4731_24110;Parent=gene-J4731_24110;Note=frameshifted;gbkey=CDS;gene=rpsH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011148781.1;locus_tag=J4731_24110;product=30S ribosomal protein S8;pseudo=true;transl_table=11
JAGETS010000098.1	Genbank	gene	13322	13636	.	-	.	ID=gene-J4731_24115;Name=rpsN;gbkey=Gene;gene=rpsN;gene_biotype=protein_coding;locus_tag=J4731_24115
JAGETS010000098.1	Protein Homology	CDS	13322	13636	.	-	0	ID=cds-MBO1929959.1;Parent=gene-J4731_24115;Dbxref=NCBI_GP:MBO1929959.1;Name=MBO1929959.1;gbkey=CDS;gene=rpsN;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005599304.1;locus_tag=J4731_24115;product=30S ribosomal protein S14;protein_id=MBO1929959.1;transl_table=11
JAGETS010000098.1	Genbank	pseudogene	13649	14186	.	-	.	ID=gene-J4731_24120;Name=rplE;gbkey=Gene;gene=rplE;gene_biotype=pseudogene;locus_tag=J4731_24120;pseudo=true
JAGETS010000098.1	Protein Homology	CDS	13649	14186	.	-	0	ID=cds-J4731_24120;Parent=gene-J4731_24120;Note=frameshifted;gbkey=CDS;gene=rplE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001096198.1;locus_tag=J4731_24120;product=50S ribosomal protein L5;pseudo=true;transl_table=11
JAGETS010000098.1	Genbank	pseudogene	14202	14513	.	-	.	ID=gene-J4731_24125;Name=rplX;gbkey=Gene;gene=rplX;gene_biotype=pseudogene;locus_tag=J4731_24125;pseudo=true
JAGETS010000098.1	Protein Homology	CDS	14202	14513	.	-	0	ID=cds-J4731_24125;Parent=gene-J4731_24125;Note=frameshifted;gbkey=CDS;gene=rplX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000729185.1;locus_tag=J4731_24125;product=50S ribosomal protein L24;pseudo=true;transl_table=11
JAGETS010000098.1	Genbank	gene	14524	14724	.	-	.	ID=gene-J4731_24130;Name=J4731_24130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_24130
JAGETS010000098.1	Protein Homology	CDS	14524	14724	.	-	0	ID=cds-MBO1929960.1;Parent=gene-J4731_24130;Dbxref=NCBI_GP:MBO1929960.1;Name=MBO1929960.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002382051.1;locus_tag=J4731_24130;product=uL14 family ribosomal protein;protein_id=MBO1929960.1;transl_table=11
JAGETS010000098.1	Genbank	gene	14721	14837	.	-	.	ID=gene-J4731_24135;Name=J4731_24135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=J4731_24135
JAGETS010000098.1	Protein Homology	CDS	14721	14837	.	-	0	ID=cds-MBO1929961.1;Parent=gene-J4731_24135;Dbxref=NCBI_GP:MBO1929961.1;Name=MBO1929961.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012463.1;locus_tag=J4731_24135;product=uL14 family ribosomal protein;protein_id=MBO1929961.1;transl_table=11
JAGETS010000098.1	Genbank	gene	15042	15320	.	-	.	ID=gene-J4731_24140;Name=rpsQ;gbkey=Gene;gene=rpsQ;gene_biotype=protein_coding;locus_tag=J4731_24140
JAGETS010000098.1	Protein Homology	CDS	15042	15320	.	-	0	ID=cds-MBO1929962.1;Parent=gene-J4731_24140;Dbxref=NCBI_GP:MBO1929962.1;Name=MBO1929962.1;gbkey=CDS;gene=rpsQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006817275.1;locus_tag=J4731_24140;product=30S ribosomal protein S17;protein_id=MBO1929962.1;transl_table=11
JAGETS010000098.1	Genbank	pseudogene	15320	15510	.	-	.	ID=gene-J4731_24145;Name=rpmC;gbkey=Gene;gene=rpmC;gene_biotype=pseudogene;locus_tag=J4731_24145;pseudo=true
JAGETS010000098.1	Protein Homology	CDS	15320	15510	.	-	0	ID=cds-J4731_24145;Parent=gene-J4731_24145;Note=frameshifted;gbkey=CDS;gene=rpmC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000644743.1;locus_tag=J4731_24145;product=50S ribosomal protein L29;pseudo=true;transl_table=11
JAGETS010000098.1	Genbank	pseudogene	15523	15916	.	-	.	ID=gene-J4731_24150;Name=rplP;gbkey=Gene;gene=rplP;gene_biotype=pseudogene;locus_tag=J4731_24150;pseudo=true
JAGETS010000098.1	Protein Homology	CDS	15523	15916	.	-	0	ID=cds-J4731_24150;Parent=gene-J4731_24150;Note=frameshifted;gbkey=CDS;gene=rplP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000928969.1;locus_tag=J4731_24150;product=50S ribosomal protein L16;pseudo=true;transl_table=11
JAGETS010000098.1	Genbank	pseudogene	15916	16628	.	-	.	ID=gene-J4731_24155;Name=rpsC;gbkey=Gene;gene=rpsC;gene_biotype=pseudogene;locus_tag=J4731_24155;pseudo=true
JAGETS010000098.1	Protein Homology	CDS	15916	16628	.	-	0	ID=cds-J4731_24155;Parent=gene-J4731_24155;Note=frameshifted;gbkey=CDS;gene=rpsC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013183228.1;locus_tag=J4731_24155;product=30S ribosomal protein S3;pseudo=true;transl_table=11
JAGETS010000098.1	Genbank	gene	16646	16978	.	-	.	ID=gene-J4731_24160;Name=rplV;gbkey=Gene;gene=rplV;gene_biotype=protein_coding;locus_tag=J4731_24160
JAGETS010000098.1	Protein Homology	CDS	16646	16978	.	-	0	ID=cds-MBO1929963.1;Parent=gene-J4731_24160;Dbxref=NCBI_GP:MBO1929963.1;Name=MBO1929963.1;gbkey=CDS;gene=rplV;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000447526.1;locus_tag=J4731_24160;product=50S ribosomal protein L22;protein_id=MBO1929963.1;transl_table=11
JAGETS010000098.1	Genbank	gene	16994	17272	.	-	.	ID=gene-J4731_24165;Name=rpsS;gbkey=Gene;gene=rpsS;gene_biotype=protein_coding;locus_tag=J4731_24165
JAGETS010000098.1	Protein Homology	CDS	16994	17272	.	-	0	ID=cds-MBO1929964.1;Parent=gene-J4731_24165;Dbxref=NCBI_GP:MBO1929964.1;Name=MBO1929964.1;gbkey=CDS;gene=rpsS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011148791.1;locus_tag=J4731_24165;product=30S ribosomal protein S19;protein_id=MBO1929964.1;transl_table=11
JAGETS010000098.1	Genbank	gene	17283	18107	.	-	.	ID=gene-J4731_24170;Name=rplB;gbkey=Gene;gene=rplB;gene_biotype=protein_coding;locus_tag=J4731_24170
JAGETS010000098.1	Protein Homology	CDS	17283	18107	.	-	0	ID=cds-MBO1929965.1;Parent=gene-J4731_24170;Dbxref=NCBI_GP:MBO1929965.1;Name=MBO1929965.1;gbkey=CDS;gene=rplB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001738551.1;locus_tag=J4731_24170;product=50S ribosomal protein L2;protein_id=MBO1929965.1;transl_table=11
JAGETS010000098.1	Genbank	pseudogene	18127	18427	.	-	.	ID=gene-J4731_24175;Name=rplW;gbkey=Gene;gene=rplW;gene_biotype=pseudogene;locus_tag=J4731_24175;pseudo=true
JAGETS010000098.1	Protein Homology	CDS	18127	18427	.	-	0	ID=cds-J4731_24175;Parent=gene-J4731_24175;Note=frameshifted;gbkey=CDS;gene=rplW;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007891652.1;locus_tag=J4731_24175;product=50S ribosomal protein L23;pseudo=true;transl_table=11
JAGETS010000098.1	Genbank	pseudogene	18424	19028	.	-	.	ID=gene-J4731_24180;Name=rplD;gbkey=Gene;gene=rplD;gene_biotype=pseudogene;locus_tag=J4731_24180;pseudo=true
JAGETS010000098.1	Protein Homology	CDS	18424	19028	.	-	0	ID=cds-J4731_24180;Parent=gene-J4731_24180;Note=frameshifted;gbkey=CDS;gene=rplD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010304939.1;locus_tag=J4731_24180;product=50S ribosomal protein L4;pseudo=true;transl_table=11
JAGETS010000098.1	Genbank	pseudogene	19045	19670	.	-	.	ID=gene-J4731_24185;Name=rplC;gbkey=Gene;gene=rplC;gene_biotype=pseudogene;locus_tag=J4731_24185;pseudo=true
JAGETS010000098.1	Protein Homology	CDS	19045	19670	.	-	0	ID=cds-J4731_24185;Parent=gene-J4731_24185;Note=frameshifted;gbkey=CDS;gene=rplC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000579825.1;locus_tag=J4731_24185;product=50S ribosomal protein L3;pseudo=true;transl_table=11
JAGETS010000098.1	Genbank	gene	19703	20014	.	-	.	ID=gene-J4731_24190;Name=rpsJ;gbkey=Gene;gene=rpsJ;gene_biotype=protein_coding;locus_tag=J4731_24190
JAGETS010000098.1	Protein Homology	CDS	19703	20014	.	-	0	ID=cds-MBO1929966.1;Parent=gene-J4731_24190;Dbxref=NCBI_GP:MBO1929966.1;Name=MBO1929966.1;gbkey=CDS;gene=rpsJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014268624.1;locus_tag=J4731_24190;product=30S ribosomal protein S10;protein_id=MBO1929966.1;transl_table=11
JAGETS010000098.1	Genbank	pseudogene	20350	20803	.	-	.	ID=gene-J4731_24195;Name=bfr;gbkey=Gene;gene=bfr;gene_biotype=pseudogene;locus_tag=J4731_24195;pseudo=true
JAGETS010000098.1	Protein Homology	CDS	20350	20803	.	-	0	ID=cds-J4731_24195;Parent=gene-J4731_24195;Note=frameshifted;gbkey=CDS;gene=bfr;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014657270.1;locus_tag=J4731_24195;product=bacterioferritin;pseudo=true;transl_table=11
JAGETS010000098.1	Genbank	gene	20946	21146	.	-	.	ID=gene-J4731_24200;Name=bfd;gbkey=Gene;gene=bfd;gene_biotype=protein_coding;locus_tag=J4731_24200
JAGETS010000098.1	Protein Homology	CDS	20946	21146	.	-	0	ID=cds-MBO1929967.1;Parent=gene-J4731_24200;Dbxref=NCBI_GP:MBO1929967.1;Name=MBO1929967.1;gbkey=CDS;gene=bfd;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004238636.1;locus_tag=J4731_24200;product=bacterioferritin-associated ferredoxin;protein_id=MBO1929967.1;transl_table=11
JAGETS010000098.1	Genbank	pseudogene	21410	22548	.	-	.	ID=gene-J4731_24205;Name=tuf;gbkey=Gene;gene=tuf;gene_biotype=pseudogene;locus_tag=J4731_24205;pseudo=true
JAGETS010000098.1	Protein Homology	CDS	21410	22548	.	-	0	ID=cds-J4731_24205;Parent=gene-J4731_24205;Note=frameshifted;gbkey=CDS;gene=tuf;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012147227.1;locus_tag=J4731_24205;product=elongation factor Tu;pseudo=true;transl_table=11
JAGETS010000098.1	Genbank	gene	22713	22789	.	-	.	ID=gene-J4731_24210;Name=J4731_24210;gbkey=Gene;gene_biotype=tRNA;locus_tag=J4731_24210
JAGETS010000098.1	tRNAscan-SE	tRNA	22713	22789	.	-	.	ID=rna-J4731_24210;Parent=gene-J4731_24210;anticodon=(pos:complement(22754..22756));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=J4731_24210;product=tRNA-Thr
JAGETS010000098.1	tRNAscan-SE	exon	22713	22789	.	-	.	ID=exon-J4731_24210-1;Parent=rna-J4731_24210;anticodon=(pos:complement(22754..22756));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=J4731_24210;product=tRNA-Thr
JAGETS010000098.1	Genbank	gene	22794	22868	.	-	.	ID=gene-J4731_24215;Name=J4731_24215;gbkey=Gene;gene_biotype=tRNA;locus_tag=J4731_24215
JAGETS010000098.1	tRNAscan-SE	tRNA	22794	22868	.	-	.	ID=rna-J4731_24215;Parent=gene-J4731_24215;anticodon=(pos:complement(22833..22835));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=J4731_24215;product=tRNA-Gly
JAGETS010000098.1	tRNAscan-SE	exon	22794	22868	.	-	.	ID=exon-J4731_24215-1;Parent=rna-J4731_24215;anticodon=(pos:complement(22833..22835));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=J4731_24215;product=tRNA-Gly
JAGETS010000098.1	Genbank	gene	22943	23027	.	-	.	ID=gene-J4731_24220;Name=J4731_24220;gbkey=Gene;gene_biotype=tRNA;locus_tag=J4731_24220
JAGETS010000098.1	tRNAscan-SE	tRNA	22943	23027	.	-	.	ID=rna-J4731_24220;Parent=gene-J4731_24220;anticodon=(pos:complement(22991..22993));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=J4731_24220;product=tRNA-Tyr
JAGETS010000098.1	tRNAscan-SE	exon	22943	23027	.	-	.	ID=exon-J4731_24220-1;Parent=rna-J4731_24220;anticodon=(pos:complement(22991..22993));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=J4731_24220;product=tRNA-Tyr
JAGETS010000098.1	Genbank	gene	23043	23118	.	-	.	ID=gene-J4731_24225;Name=J4731_24225;gbkey=Gene;gene_biotype=tRNA;locus_tag=J4731_24225
JAGETS010000098.1	tRNAscan-SE	tRNA	23043	23118	.	-	.	ID=rna-J4731_24225;Parent=gene-J4731_24225;anticodon=(pos:complement(23083..23085));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=J4731_24225;product=tRNA-Thr
JAGETS010000098.1	tRNAscan-SE	exon	23043	23118	.	-	.	ID=exon-J4731_24225-1;Parent=rna-J4731_24225;anticodon=(pos:complement(23083..23085));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=J4731_24225;product=tRNA-Thr
JAGETS010000098.1	Genbank	pseudogene	23535	24478	.	+	.	ID=gene-J4731_24230;Name=coaA;gbkey=Gene;gene=coaA;gene_biotype=pseudogene;gene_synonym=panK;locus_tag=J4731_24230;pseudo=true
JAGETS010000098.1	Protein Homology	CDS	23535	24478	.	+	0	ID=cds-J4731_24230;Parent=gene-J4731_24230;Note=frameshifted%3B internal stop;gbkey=CDS;gene=coaA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012439917.1;locus_tag=J4731_24230;product=type I pantothenate kinase;pseudo=true;transl_table=11
JAGETS010000098.1	Genbank	pseudogene	24515	25481	.	-	.	ID=gene-J4731_24235;Name=birA;gbkey=Gene;gene=birA;gene_biotype=pseudogene;locus_tag=J4731_24235;pseudo=true
JAGETS010000098.1	Protein Homology	CDS	24515	25481	.	-	0	ID=cds-J4731_24235;Parent=gene-J4731_24235;Note=frameshifted;gbkey=CDS;gene=birA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006663522.1;locus_tag=J4731_24235;product=bifunctional biotin--[acetyl-CoA-carboxylase] ligase/biotin operon repressor BirA;pseudo=true;transl_table=11
JAGETS010000098.1	Genbank	pseudogene	25478	26506	.	-	.	ID=gene-J4731_24240;Name=murB;gbkey=Gene;gene=murB;gene_biotype=pseudogene;locus_tag=J4731_24240;pseudo=true
JAGETS010000098.1	Protein Homology	CDS	25478	26506	.	-	0	ID=cds-J4731_24240;Parent=gene-J4731_24240;Note=frameshifted;gbkey=CDS;gene=murB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004264360.1;locus_tag=J4731_24240;product=UDP-N-acetylmuramate dehydrogenase;pseudo=true;transl_table=11
JAGETS010000098.1	Genbank	gene	26655	26768	.	-	.	ID=gene-J4731_24245;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=J4731_24245
JAGETS010000098.1	cmsearch	rRNA	26655	26768	.	-	.	ID=rna-J4731_24245;Parent=gene-J4731_24245;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=J4731_24245;product=5S ribosomal RNA
JAGETS010000098.1	cmsearch	exon	26655	26768	.	-	.	ID=exon-J4731_24245-1;Parent=rna-J4731_24245;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=J4731_24245;product=5S ribosomal RNA
JAGETS010000098.1	Genbank	gene	26795	26868	.	-	.	ID=gene-J4731_24250;Name=J4731_24250;gbkey=Gene;gene_biotype=tRNA;locus_tag=J4731_24250
JAGETS010000098.1	tRNAscan-SE	tRNA	26795	26868	.	-	.	ID=rna-J4731_24250;Parent=gene-J4731_24250;gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=J4731_24250;product=tRNA-OTHER
JAGETS010000098.1	tRNAscan-SE	exon	26795	26868	.	-	.	ID=exon-J4731_24250-1;Parent=rna-J4731_24250;gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=J4731_24250;product=tRNA-OTHER
JAGETS010000098.1	Genbank	gene	26908	27022	.	-	.	ID=gene-J4731_24255;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=J4731_24255
JAGETS010000098.1	cmsearch	rRNA	26908	27022	.	-	.	ID=rna-J4731_24255;Parent=gene-J4731_24255;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=J4731_24255;product=5S ribosomal RNA
JAGETS010000098.1	cmsearch	exon	26908	27022	.	-	.	ID=exon-J4731_24255-1;Parent=rna-J4731_24255;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=J4731_24255;product=5S ribosomal RNA
JAGETS010000098.1	Genbank	gene	27159	28799	.	-	.	ID=gene-J4731_24260;Name=J4731_24260;end_range=28799,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=J4731_24260;partial=true
JAGETS010000098.1	cmsearch	rRNA	27159	28799	.	-	.	ID=rna-J4731_24260;Parent=gene-J4731_24260;Dbxref=RFAM:RF02541;end_range=28799,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=J4731_24260;partial=true;product=23S ribosomal RNA
JAGETS010000098.1	cmsearch	exon	27159	28799	.	-	.	ID=exon-J4731_24260-1;Parent=rna-J4731_24260;Dbxref=RFAM:RF02541;end_range=28799,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=J4731_24260;partial=true;product=23S ribosomal RNA
##sequence-region JAGETS010000099.1 1 14277
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=587
JAGETS010000099.1	Genbank	region	1	14277	.	+	.	ID=JAGETS010000099.1:1..14277;Dbxref=taxon:587;collected-by=NHLS;collection-date=2018;country=South Africa: Pretoria;gbkey=Src;isolation-source=stool;lat-lon=25.7479 S 28.2293 E;mol_type=genomic DNA;nat-host=porcine;strain=SG003
JAGETS010000099.1	Genbank	pseudogene	1	1796	.	-	.	ID=gene-J4731_24265;Name=J4731_24265;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_24265;pseudo=true
JAGETS010000099.1	Protein Homology	CDS	1	1796	.	-	0	ID=cds-J4731_24265;Parent=gene-J4731_24265;Note=frameshifted%3B internal stop%3B incomplete%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011146383.1;locus_tag=J4731_24265;product=ATP-dependent DNA helicase;pseudo=true;transl_table=11
JAGETS010000099.1	Genbank	pseudogene	1952	2298	.	+	.	ID=gene-J4731_24270;Name=J4731_24270;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_24270;pseudo=true
JAGETS010000099.1	Protein Homology	CDS	1952	2298	.	+	0	ID=cds-J4731_24270;Parent=gene-J4731_24270;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004254978.1;locus_tag=J4731_24270;product=RidA family protein;pseudo=true;transl_table=11
JAGETS010000099.1	Genbank	gene	2503	2931	.	-	.	ID=gene-J4731_24275;Name=mdtI;gbkey=Gene;gene=mdtI;gene_biotype=protein_coding;locus_tag=J4731_24275
JAGETS010000099.1	Protein Homology	CDS	2503	2931	.	-	0	ID=cds-MBO1929968.1;Parent=gene-J4731_24275;Dbxref=NCBI_GP:MBO1929968.1;Name=MBO1929968.1;gbkey=CDS;gene=mdtI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004247986.1;locus_tag=J4731_24275;product=multidrug/spermidine efflux SMR transporter subunit MdtI;protein_id=MBO1929968.1;transl_table=11
JAGETS010000099.1	Genbank	pseudogene	3010	3358	.	-	.	ID=gene-J4731_24280;Name=mdtJ;gbkey=Gene;gene=mdtJ;gene_biotype=pseudogene;locus_tag=J4731_24280;pseudo=true
JAGETS010000099.1	Protein Homology	CDS	3010	3358	.	-	0	ID=cds-J4731_24280;Parent=gene-J4731_24280;Note=frameshifted;gbkey=CDS;gene=mdtJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004179723.1;locus_tag=J4731_24280;product=multidrug/spermidine efflux SMR transporter subunit MdtJ;pseudo=true;transl_table=11
JAGETS010000099.1	Genbank	pseudogene	3982	4828	.	+	.	ID=gene-J4731_24285;Name=pdxK;gbkey=Gene;gene=pdxK;gene_biotype=pseudogene;gene_synonym=thiJ;locus_tag=J4731_24285;pseudo=true
JAGETS010000099.1	Protein Homology	CDS	3982	4828	.	+	0	ID=cds-J4731_24285;Parent=gene-J4731_24285;Note=frameshifted;gbkey=CDS;gene=pdxK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008911328.1;locus_tag=J4731_24285;product=pyridoxine/pyridoxal/pyridoxamine kinase;pseudo=true;transl_table=11
JAGETS010000099.1	Genbank	pseudogene	4934	6399	.	-	.	ID=gene-J4731_24290;Name=zwf;gbkey=Gene;gene=zwf;gene_biotype=pseudogene;locus_tag=J4731_24290;pseudo=true
JAGETS010000099.1	Protein Homology	CDS	4934	6399	.	-	0	ID=cds-J4731_24290;Parent=gene-J4731_24290;Note=frameshifted;gbkey=CDS;gene=zwf;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120712.1;locus_tag=J4731_24290;product=glucose-6-phosphate dehydrogenase;pseudo=true;transl_table=11
JAGETS010000099.1	Genbank	pseudogene	6869	7707	.	+	.	ID=gene-J4731_24295;Name=J4731_24295;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_24295;pseudo=true
JAGETS010000099.1	Protein Homology	CDS	6869	7707	.	+	0	ID=cds-J4731_24295;Parent=gene-J4731_24295;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006813122.1;locus_tag=J4731_24295;product=MurR/RpiR family transcriptional regulator;pseudo=true;transl_table=11
JAGETS010000099.1	Genbank	pseudogene	7907	9342	.	+	.	ID=gene-J4731_24300;Name=pyk;gbkey=Gene;gene=pyk;gene_biotype=pseudogene;locus_tag=J4731_24300;pseudo=true
JAGETS010000099.1	Protein Homology	CDS	7907	9342	.	+	0	ID=cds-J4731_24300;Parent=gene-J4731_24300;Note=frameshifted;gbkey=CDS;gene=pyk;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120709.1;locus_tag=J4731_24300;product=pyruvate kinase;pseudo=true;transl_table=11
JAGETS010000099.1	Genbank	pseudogene	9469	10483	.	-	.	ID=gene-J4731_24305;Name=J4731_24305;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_24305;pseudo=true
JAGETS010000099.1	Protein Homology	CDS	9469	10483	.	-	0	ID=cds-J4731_24305;Parent=gene-J4731_24305;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004254996.1;locus_tag=J4731_24305;product=type 1 fimbrial protein;pseudo=true;transl_table=11
JAGETS010000099.1	Genbank	pseudogene	10492	12917	.	-	.	ID=gene-J4731_24310;Name=J4731_24310;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_24310;pseudo=true
JAGETS010000099.1	Protein Homology	CDS	10492	12917	.	-	0	ID=cds-J4731_24310;Parent=gene-J4731_24310;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004919481.1;locus_tag=J4731_24310;product=fimbrial biogenesis outer membrane usher protein;pseudo=true;transl_table=11
JAGETS010000099.1	Genbank	pseudogene	12947	13611	.	-	.	ID=gene-J4731_24315;Name=J4731_24315;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_24315;pseudo=true
JAGETS010000099.1	Protein Homology	CDS	12947	13611	.	-	0	ID=cds-J4731_24315;Parent=gene-J4731_24315;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006813126.1;locus_tag=J4731_24315;product=molecular chaperone;pseudo=true;transl_table=11
JAGETS010000099.1	Genbank	pseudogene	13656	14143	.	-	.	ID=gene-J4731_24320;Name=J4731_24320;gbkey=Gene;gene_biotype=pseudogene;locus_tag=J4731_24320;pseudo=true
JAGETS010000099.1	Protein Homology	CDS	13656	14143	.	-	0	ID=cds-J4731_24320;Parent=gene-J4731_24320;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246312.1;locus_tag=J4731_24320;product=type 1 fimbrial protein;pseudo=true;transl_table=11
###