##gff-version 3 #!gff-spec-version 1.21 #!processor NCBI annotwriter #!genome-build ASM2040436v1 #!genome-build-accession NCBI_Assembly:GCA_020404365.1 #!annotation-date 10/04/2021 14:25:08 #!annotation-source NCBI ##sequence-region DYDR01000001.1 1 80033 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2866300 DYDR01000001.1 tpg region 1 80033 . + . ID=DYDR01000001.1:1..80033;Dbxref=taxon:2866300;collection-date=2001-12-01;country=Madagascar: Toliara;environmental-sample=true;gbkey=Src;isolate=Choog2;isolation-source=Insect;metagenome-source=insect metagenome;metagenomic=true;mol_type=genomic DNA;nat-host=Columbicola hoogstraali DYDR01000001.1 tpg gene 282 350 . - . ID=gene-LFV90_00005;Name=LFV90_00005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_00005 DYDR01000001.1 Protein Homology CDS 282 350 . - 0 ID=cds-HJD60573.1;Parent=gene-LFV90_00005;Dbxref=NCBI_GP:HJD60573.1;Name=HJD60573.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR03777.1;locus_tag=LFV90_00005;product=palindromic element RPE4 domain-containing protein;protein_id=HJD60573.1;transl_table=11 DYDR01000001.1 tpg gene 505 825 . - . ID=gene-LFV90_00010;Name=LFV90_00010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_00010 DYDR01000001.1 Protein Homology CDS 505 825 . - 0 ID=cds-HJD60574.1;Parent=gene-LFV90_00010;Dbxref=NCBI_GP:HJD60574.1;Name=HJD60574.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011476758.1;locus_tag=LFV90_00010;product=hypothetical protein;protein_id=HJD60574.1;transl_table=11 DYDR01000001.1 tpg gene 879 1616 . - . ID=gene-LFV90_00015;Name=truA;gbkey=Gene;gene=truA;gene_biotype=protein_coding;locus_tag=LFV90_00015 DYDR01000001.1 Protein Homology CDS 879 1616 . - 0 ID=cds-HJD60575.1;Parent=gene-LFV90_00015;Dbxref=NCBI_GP:HJD60575.1;Name=HJD60575.1;gbkey=CDS;gene=truA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012150184.1;locus_tag=LFV90_00015;product=tRNA pseudouridine(38-40) synthase TruA;protein_id=HJD60575.1;transl_table=11 DYDR01000001.1 tpg gene 1949 3865 . - . ID=gene-LFV90_00020;Name=rpoD;gbkey=Gene;gene=rpoD;gene_biotype=protein_coding;locus_tag=LFV90_00020 DYDR01000001.1 Protein Homology CDS 1949 3865 . - 0 ID=cds-HJD60576.1;Parent=gene-LFV90_00020;Dbxref=NCBI_GP:HJD60576.1;Name=HJD60576.1;gbkey=CDS;gene=rpoD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017442755.1;locus_tag=LFV90_00020;product=RNA polymerase sigma factor RpoD;protein_id=HJD60576.1;transl_table=11 DYDR01000001.1 tpg gene 3945 5744 . - . ID=gene-LFV90_00025;Name=dnaG;gbkey=Gene;gene=dnaG;gene_biotype=protein_coding;locus_tag=LFV90_00025 DYDR01000001.1 Protein Homology CDS 3945 5744 . - 0 ID=cds-HJD60577.1;Parent=gene-LFV90_00025;Dbxref=NCBI_GP:HJD60577.1;Name=HJD60577.1;gbkey=CDS;gene=dnaG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011476751.1;locus_tag=LFV90_00025;product=DNA primase;protein_id=HJD60577.1;transl_table=11 DYDR01000001.1 tpg gene 5748 6362 . - . ID=gene-LFV90_00030;Name=LFV90_00030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_00030 DYDR01000001.1 Protein Homology CDS 5748 6362 . - 0 ID=cds-HJD60578.1;Parent=gene-LFV90_00030;Dbxref=NCBI_GP:HJD60578.1;Name=HJD60578.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004596759.1;locus_tag=LFV90_00030;product=SEC59/DGK1/VTE5 family protein;protein_id=HJD60578.1;transl_table=11 DYDR01000001.1 tpg gene 6451 6939 . + . ID=gene-LFV90_00035;Name=greA;gbkey=Gene;gene=greA;gene_biotype=protein_coding;locus_tag=LFV90_00035 DYDR01000001.1 Protein Homology CDS 6451 6939 . + 0 ID=cds-HJD60579.1;Parent=gene-LFV90_00035;Dbxref=NCBI_GP:HJD60579.1;Name=HJD60579.1;gbkey=CDS;gene=greA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011476749.1;locus_tag=LFV90_00035;product=transcription elongation factor GreA;protein_id=HJD60579.1;transl_table=11 DYDR01000001.1 tpg gene 7415 8302 . + . ID=gene-LFV90_00040;Name=LFV90_00040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_00040 DYDR01000001.1 GeneMarkS-2+ CDS 7415 8302 . + 0 ID=cds-HJD60580.1;Parent=gene-LFV90_00040;Dbxref=NCBI_GP:HJD60580.1;Name=HJD60580.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_00040;product=hypothetical protein;protein_id=HJD60580.1;transl_table=11 DYDR01000001.1 tpg gene 8319 8534 . + . ID=gene-LFV90_00045;Name=LFV90_00045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_00045 DYDR01000001.1 Protein Homology CDS 8319 8534 . + 0 ID=cds-HJD60581.1;Parent=gene-LFV90_00045;Dbxref=NCBI_GP:HJD60581.1;Name=HJD60581.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017470.2;locus_tag=LFV90_00045;product=DUF805 domain-containing protein;protein_id=HJD60581.1;transl_table=11 DYDR01000001.1 tpg gene 8744 9019 . + . ID=gene-LFV90_00050;Name=LFV90_00050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_00050 DYDR01000001.1 Protein Homology CDS 8744 9019 . + 0 ID=cds-HJD60582.1;Parent=gene-LFV90_00050;Dbxref=NCBI_GP:HJD60582.1;Name=HJD60582.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017470.2;locus_tag=LFV90_00050;product=DUF805 domain-containing protein;protein_id=HJD60582.1;transl_table=11 DYDR01000001.1 tpg gene 8971 9135 . + . ID=gene-LFV90_00055;Name=LFV90_00055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_00055 DYDR01000001.1 GeneMarkS-2+ CDS 8971 9135 . + 0 ID=cds-HJD60583.1;Parent=gene-LFV90_00055;Dbxref=NCBI_GP:HJD60583.1;Name=HJD60583.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_00055;product=hypothetical protein;protein_id=HJD60583.1;transl_table=11 DYDR01000001.1 tpg gene 9354 9554 . + . ID=gene-LFV90_00060;Name=LFV90_00060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_00060 DYDR01000001.1 Protein Homology CDS 9354 9554 . + 0 ID=cds-HJD60584.1;Parent=gene-LFV90_00060;Dbxref=NCBI_GP:HJD60584.1;Name=HJD60584.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017470.2;locus_tag=LFV90_00060;product=DUF805 domain-containing protein;protein_id=HJD60584.1;transl_table=11 DYDR01000001.1 tpg gene 9679 10305 . + . ID=gene-LFV90_00065;Name=lipB;gbkey=Gene;gene=lipB;gene_biotype=protein_coding;locus_tag=LFV90_00065 DYDR01000001.1 Protein Homology CDS 9679 10305 . + 0 ID=cds-HJD60585.1;Parent=gene-LFV90_00065;Dbxref=NCBI_GP:HJD60585.1;Name=HJD60585.1;gbkey=CDS;gene=lipB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011271683.1;locus_tag=LFV90_00065;product=lipoyl(octanoyl) transferase LipB;protein_id=HJD60585.1;transl_table=11 DYDR01000001.1 tpg gene 10302 10826 . + . ID=gene-LFV90_00070;Name=LFV90_00070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_00070 DYDR01000001.1 Protein Homology CDS 10302 10826 . + 0 ID=cds-HJD60586.1;Parent=gene-LFV90_00070;Dbxref=NCBI_GP:HJD60586.1;Name=HJD60586.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011476747.1;locus_tag=LFV90_00070;product=YdcF family protein;protein_id=HJD60586.1;transl_table=11 DYDR01000001.1 tpg gene 10911 11129 . + . ID=gene-LFV90_00075;Name=LFV90_00075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_00075 DYDR01000001.1 Protein Homology CDS 10911 11129 . + 0 ID=cds-HJD60587.1;Parent=gene-LFV90_00075;Dbxref=NCBI_GP:HJD60587.1;Name=HJD60587.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014362907.1;locus_tag=LFV90_00075;product=transposase;protein_id=HJD60587.1;transl_table=11 DYDR01000001.1 tpg gene 11187 11510 . - . ID=gene-LFV90_00080;Name=LFV90_00080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_00080 DYDR01000001.1 Protein Homology CDS 11187 11510 . - 0 ID=cds-HJD60588.1;Parent=gene-LFV90_00080;Dbxref=NCBI_GP:HJD60588.1;Name=HJD60588.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012151438.1;locus_tag=LFV90_00080;product=YbaB/EbfC family nucleoid-associated protein;protein_id=HJD60588.1;transl_table=11 DYDR01000001.1 tpg gene 11522 13048 . - . ID=gene-LFV90_00085;Name=dnaX;gbkey=Gene;gene=dnaX;gene_biotype=protein_coding;locus_tag=LFV90_00085 DYDR01000001.1 Protein Homology CDS 11522 13048 . - 0 ID=cds-HJD60589.1;Parent=gene-LFV90_00085;Dbxref=NCBI_GP:HJD60589.1;Name=HJD60589.1;gbkey=CDS;gene=dnaX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004997117.1;locus_tag=LFV90_00085;product=DNA polymerase III subunit gamma/tau;protein_id=HJD60589.1;transl_table=11 DYDR01000001.1 tpg gene 13449 13542 . - . ID=gene-LFV90_00090;Name=ffs;gbkey=Gene;gene=ffs;gene_biotype=SRP_RNA;locus_tag=LFV90_00090 DYDR01000001.1 cmsearch SRP_RNA 13449 13542 . - . ID=rna-LFV90_00090;Parent=gene-LFV90_00090;Dbxref=RFAM:RF00169;gbkey=ncRNA;gene=ffs;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LFV90_00090;product=signal recognition particle sRNA small type DYDR01000001.1 cmsearch exon 13449 13542 . - . ID=exon-LFV90_00090-1;Parent=rna-LFV90_00090;Dbxref=RFAM:RF00169;gbkey=ncRNA;gene=ffs;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LFV90_00090;product=signal recognition particle sRNA small type DYDR01000001.1 tpg gene 13557 14201 . - . ID=gene-LFV90_00095;Name=LFV90_00095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_00095 DYDR01000001.1 Protein Homology CDS 13557 14201 . - 0 ID=cds-HJD60590.1;Parent=gene-LFV90_00095;Dbxref=NCBI_GP:HJD60590.1;Name=HJD60590.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011476742.1;locus_tag=LFV90_00095;product=outer membrane lipoprotein carrier protein LolA;protein_id=HJD60590.1;transl_table=11 DYDR01000001.1 tpg gene 14270 15400 . + . ID=gene-LFV90_00100;Name=LFV90_00100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_00100 DYDR01000001.1 Protein Homology CDS 14270 15400 . + 0 ID=cds-HJD60591.1;Parent=gene-LFV90_00100;Dbxref=NCBI_GP:HJD60591.1;Name=HJD60591.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011476741.1;locus_tag=LFV90_00100;product=NAD(P) transhydrogenase subunit alpha;protein_id=HJD60591.1;transl_table=11 DYDR01000001.1 tpg gene 15444 15515 . - . ID=gene-LFV90_00105;Name=LFV90_00105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_00105 DYDR01000001.1 Protein Homology CDS 15444 15515 . - 0 ID=cds-HJD60592.1;Parent=gene-LFV90_00105;Dbxref=NCBI_GP:HJD60592.1;Name=HJD60592.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR03776.1;locus_tag=LFV90_00105;product=palindromic element RPE5 domain-containing protein;protein_id=HJD60592.1;transl_table=11 DYDR01000001.1 tpg gene 15553 15951 . + . ID=gene-LFV90_00110;Name=LFV90_00110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_00110 DYDR01000001.1 Protein Homology CDS 15553 15951 . + 0 ID=cds-HJD60593.1;Parent=gene-LFV90_00110;Dbxref=NCBI_GP:HJD60593.1;Name=HJD60593.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016926652.1;locus_tag=LFV90_00110;product=proton-translocating transhydrogenase family protein;protein_id=HJD60593.1;transl_table=11 DYDR01000001.1 tpg gene 16024 16401 . - . ID=gene-LFV90_00115;Name=LFV90_00115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_00115 DYDR01000001.1 GeneMarkS-2+ CDS 16024 16401 . - 0 ID=cds-HJD60594.1;Parent=gene-LFV90_00115;Dbxref=NCBI_GP:HJD60594.1;Name=HJD60594.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_00115;product=hypothetical protein;protein_id=HJD60594.1;transl_table=11 DYDR01000001.1 tpg gene 16395 16610 . - . ID=gene-LFV90_00120;Name=LFV90_00120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_00120 DYDR01000001.1 Protein Homology CDS 16395 16610 . - 0 ID=cds-HJD60595.1;Parent=gene-LFV90_00120;Dbxref=NCBI_GP:HJD60595.1;Name=HJD60595.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016926564.1;locus_tag=LFV90_00120;product=hypothetical protein;protein_id=HJD60595.1;transl_table=11 DYDR01000001.1 tpg gene 16750 17289 . - . ID=gene-LFV90_00125;Name=LFV90_00125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_00125 DYDR01000001.1 GeneMarkS-2+ CDS 16750 17289 . - 0 ID=cds-HJD60596.1;Parent=gene-LFV90_00125;Dbxref=NCBI_GP:HJD60596.1;Name=HJD60596.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_00125;product=hypothetical protein;protein_id=HJD60596.1;transl_table=11 DYDR01000001.1 tpg gene 17358 18593 . - . ID=gene-LFV90_00130;Name=LFV90_00130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_00130 DYDR01000001.1 Protein Homology CDS 17358 18593 . - 0 ID=cds-HJD60597.1;Parent=gene-LFV90_00130;Dbxref=NCBI_GP:HJD60597.1;Name=HJD60597.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017442619.1;locus_tag=LFV90_00130;product=MFS transporter;protein_id=HJD60597.1;transl_table=11 DYDR01000001.1 tpg gene 18950 19267 . - . ID=gene-LFV90_00135;Name=LFV90_00135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_00135 DYDR01000001.1 Protein Homology CDS 18950 19267 . - 0 ID=cds-HJD60598.1;Parent=gene-LFV90_00135;Dbxref=NCBI_GP:HJD60598.1;Name=HJD60598.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004596991.1;locus_tag=LFV90_00135;product=cell division protein ZapA;protein_id=HJD60598.1;transl_table=11 DYDR01000001.1 tpg gene 19270 19473 . - . ID=gene-LFV90_00140;Name=LFV90_00140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_00140 DYDR01000001.1 Protein Homology CDS 19270 19473 . - 0 ID=cds-HJD60599.1;Parent=gene-LFV90_00140;Dbxref=NCBI_GP:HJD60599.1;Name=HJD60599.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011271513.1;locus_tag=LFV90_00140;product=hypothetical protein;protein_id=HJD60599.1;transl_table=11 DYDR01000001.1 tpg pseudogene 19477 19832 . - . ID=gene-LFV90_00145;Name=LFV90_00145;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LFV90_00145;pseudo=true DYDR01000001.1 Protein Homology CDS 19477 19832 . - 0 ID=cds-LFV90_00145;Parent=gene-LFV90_00145;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012720012.1;locus_tag=LFV90_00145;product=helix-turn-helix domain-containing protein;pseudo=true;transl_table=11 DYDR01000001.1 tpg gene 19835 24586 . - . ID=gene-LFV90_00150;Name=LFV90_00150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_00150 DYDR01000001.1 Protein Homology CDS 19835 24586 . - 0 ID=cds-HJD60600.1;Parent=gene-LFV90_00150;Dbxref=NCBI_GP:HJD60600.1;Name=HJD60600.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014411050.1;locus_tag=LFV90_00150;product=NAD-glutamate dehydrogenase;protein_id=HJD60600.1;transl_table=11 DYDR01000001.1 tpg gene 24723 26060 . + . ID=gene-LFV90_00155;Name=mnmE;gbkey=Gene;gene=mnmE;gene_biotype=protein_coding;locus_tag=LFV90_00155 DYDR01000001.1 Protein Homology CDS 24723 26060 . + 0 ID=cds-HJD60601.1;Parent=gene-LFV90_00155;Dbxref=NCBI_GP:HJD60601.1;Name=HJD60601.1;gbkey=CDS;gene=mnmE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011476733.1;locus_tag=LFV90_00155;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE;protein_id=HJD60601.1;transl_table=11 DYDR01000001.1 tpg gene 26149 27084 . + . ID=gene-LFV90_00160;Name=LFV90_00160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_00160 DYDR01000001.1 GeneMarkS-2+ CDS 26149 27084 . + 0 ID=cds-HJD60602.1;Parent=gene-LFV90_00160;Dbxref=NCBI_GP:HJD60602.1;Name=HJD60602.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_00160;product=hypothetical protein;protein_id=HJD60602.1;transl_table=11 DYDR01000001.1 tpg gene 27290 27478 . + . ID=gene-LFV90_00165;Name=LFV90_00165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_00165 DYDR01000001.1 GeneMarkS-2+ CDS 27290 27478 . + 0 ID=cds-HJD60603.1;Parent=gene-LFV90_00165;Dbxref=NCBI_GP:HJD60603.1;Name=HJD60603.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_00165;product=hypothetical protein;protein_id=HJD60603.1;transl_table=11 DYDR01000001.1 tpg gene 27501 27644 . + . ID=gene-LFV90_00170;Name=LFV90_00170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_00170 DYDR01000001.1 GeneMarkS-2+ CDS 27501 27644 . + 0 ID=cds-HJD60604.1;Parent=gene-LFV90_00170;Dbxref=NCBI_GP:HJD60604.1;Name=HJD60604.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_00170;product=hypothetical protein;protein_id=HJD60604.1;transl_table=11 DYDR01000001.1 tpg gene 27952 29106 . - . ID=gene-LFV90_00175;Name=LFV90_00175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_00175 DYDR01000001.1 GeneMarkS-2+ CDS 27952 29106 . - 0 ID=cds-HJD60605.1;Parent=gene-LFV90_00175;Dbxref=NCBI_GP:HJD60605.1;Name=HJD60605.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_00175;product=hypothetical protein;protein_id=HJD60605.1;transl_table=11 DYDR01000001.1 tpg gene 29457 30539 . - . ID=gene-LFV90_00180;Name=recF;gbkey=Gene;gene=recF;gene_biotype=protein_coding;locus_tag=LFV90_00180 DYDR01000001.1 Protein Homology CDS 29457 30539 . - 0 ID=cds-HJD60606.1;Parent=gene-LFV90_00180;Dbxref=NCBI_GP:HJD60606.1;Name=HJD60606.1;gbkey=CDS;gene=recF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012151492.1;locus_tag=LFV90_00180;product=DNA replication/repair protein RecF;protein_id=HJD60606.1;transl_table=11 DYDR01000001.1 tpg gene 30551 31204 . - . ID=gene-LFV90_00185;Name=LFV90_00185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_00185 DYDR01000001.1 Protein Homology CDS 30551 31204 . - 0 ID=cds-HJD60607.1;Parent=gene-LFV90_00185;Dbxref=NCBI_GP:HJD60607.1;Name=HJD60607.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008581168.1;locus_tag=LFV90_00185;product=CADD family putative folate metabolism protein;protein_id=HJD60607.1;transl_table=11 DYDR01000001.1 tpg gene 31222 31689 . - . ID=gene-LFV90_00190;Name=LFV90_00190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_00190 DYDR01000001.1 Protein Homology CDS 31222 31689 . - 0 ID=cds-HJD60608.1;Parent=gene-LFV90_00190;Dbxref=NCBI_GP:HJD60608.1;Name=HJD60608.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014013756.1;locus_tag=LFV90_00190;product=dihydrofolate reductase;protein_id=HJD60608.1;transl_table=11 DYDR01000001.1 tpg gene 31758 33077 . - . ID=gene-LFV90_00195;Name=folP;gbkey=Gene;gene=folP;gene_biotype=protein_coding;locus_tag=LFV90_00195 DYDR01000001.1 Protein Homology CDS 31758 33077 . - 0 ID=cds-HJD60609.1;Parent=gene-LFV90_00195;Dbxref=NCBI_GP:HJD60609.1;Name=HJD60609.1;gbkey=CDS;gene=folP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017532183.1;locus_tag=LFV90_00195;product=dihydropteroate synthase;protein_id=HJD60609.1;transl_table=11 DYDR01000001.1 tpg gene 33074 33439 . - . ID=gene-LFV90_00200;Name=LFV90_00200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_00200 DYDR01000001.1 Protein Homology CDS 33074 33439 . - 0 ID=cds-HJD60610.1;Parent=gene-LFV90_00200;Dbxref=NCBI_GP:HJD60610.1;Name=HJD60610.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR00526.1;locus_tag=LFV90_00200;product=dihydroneopterin aldolase;protein_id=HJD60610.1;transl_table=11 DYDR01000001.1 tpg gene 33538 34206 . - . ID=gene-LFV90_00205;Name=LFV90_00205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_00205 DYDR01000001.1 Protein Homology CDS 33538 34206 . - 0 ID=cds-HJD60611.1;Parent=gene-LFV90_00205;Dbxref=NCBI_GP:HJD60611.1;Name=HJD60611.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010976726.1;locus_tag=LFV90_00205;product=DUF5394 family protein;protein_id=HJD60611.1;transl_table=11 DYDR01000001.1 tpg gene 34286 34672 . - . ID=gene-LFV90_00210;Name=LFV90_00210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_00210 DYDR01000001.1 GeneMarkS-2+ CDS 34286 34672 . - 0 ID=cds-HJD60612.1;Parent=gene-LFV90_00210;Dbxref=NCBI_GP:HJD60612.1;Name=HJD60612.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_00210;product=hypothetical protein;protein_id=HJD60612.1;transl_table=11 DYDR01000001.1 tpg gene 35102 35992 . - . ID=gene-LFV90_00215;Name=LFV90_00215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_00215 DYDR01000001.1 GeneMarkS-2+ CDS 35102 35992 . - 0 ID=cds-HJD60613.1;Parent=gene-LFV90_00215;Dbxref=NCBI_GP:HJD60613.1;Name=HJD60613.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_00215;product=hypothetical protein;protein_id=HJD60613.1;transl_table=11 DYDR01000001.1 tpg gene 36047 36280 . - . ID=gene-LFV90_00220;Name=LFV90_00220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_00220 DYDR01000001.1 Protein Homology CDS 36047 36280 . - 0 ID=cds-HJD60614.1;Parent=gene-LFV90_00220;Dbxref=NCBI_GP:HJD60614.1;Name=HJD60614.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012150270.1;locus_tag=LFV90_00220;product=hypothetical protein;protein_id=HJD60614.1;transl_table=11 DYDR01000001.1 tpg gene 36253 36633 . - . ID=gene-LFV90_00225;Name=LFV90_00225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_00225 DYDR01000001.1 GeneMarkS-2+ CDS 36253 36633 . - 0 ID=cds-HJD60615.1;Parent=gene-LFV90_00225;Dbxref=NCBI_GP:HJD60615.1;Name=HJD60615.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_00225;product=hypothetical protein;protein_id=HJD60615.1;transl_table=11 DYDR01000001.1 tpg gene 36894 37493 . + . ID=gene-LFV90_00230;Name=LFV90_00230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_00230 DYDR01000001.1 Protein Homology CDS 36894 37493 . + 0 ID=cds-HJD60616.1;Parent=gene-LFV90_00230;Dbxref=NCBI_GP:HJD60616.1;Name=HJD60616.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011476725.1;locus_tag=LFV90_00230;product=SCO family protein;protein_id=HJD60616.1;transl_table=11 DYDR01000001.1 tpg gene 37611 38522 . - . ID=gene-LFV90_00235;Name=ftsY;gbkey=Gene;gene=ftsY;gene_biotype=protein_coding;locus_tag=LFV90_00235 DYDR01000001.1 Protein Homology CDS 37611 38522 . - 0 ID=cds-HJD60617.1;Parent=gene-LFV90_00235;Dbxref=NCBI_GP:HJD60617.1;Name=HJD60617.1;gbkey=CDS;gene=ftsY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011191193.1;locus_tag=LFV90_00235;product=signal recognition particle-docking protein FtsY;protein_id=HJD60617.1;transl_table=11 DYDR01000001.1 tpg gene 38656 39225 . - . ID=gene-LFV90_00240;Name=LFV90_00240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_00240 DYDR01000001.1 Protein Homology CDS 38656 39225 . - 0 ID=cds-HJD60618.1;Parent=gene-LFV90_00240;Dbxref=NCBI_GP:HJD60618.1;Name=HJD60618.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012150274.1;locus_tag=LFV90_00240;product=YqgE/AlgH family protein;protein_id=HJD60618.1;transl_table=11 DYDR01000001.1 tpg gene 39299 39973 . + . ID=gene-LFV90_00245;Name=LFV90_00245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_00245 DYDR01000001.1 Protein Homology CDS 39299 39973 . + 0 ID=cds-HJD60619.1;Parent=gene-LFV90_00245;Dbxref=NCBI_GP:HJD60619.1;Name=HJD60619.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011476722.1;locus_tag=LFV90_00245;product=CvpA family protein;protein_id=HJD60619.1;transl_table=11 DYDR01000001.1 tpg gene 40131 40700 . - . ID=gene-LFV90_00250;Name=LFV90_00250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_00250 DYDR01000001.1 Protein Homology CDS 40131 40700 . - 0 ID=cds-HJD60620.1;Parent=gene-LFV90_00250;Dbxref=NCBI_GP:HJD60620.1;Name=HJD60620.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011476721.1;locus_tag=LFV90_00250;product=DUF1013 domain-containing protein;protein_id=HJD60620.1;transl_table=11 DYDR01000001.1 tpg gene 40831 42228 . - . ID=gene-LFV90_00255;Name=LFV90_00255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_00255 DYDR01000001.1 Protein Homology CDS 40831 42228 . - 0 ID=cds-HJD60621.1;Parent=gene-LFV90_00255;Dbxref=NCBI_GP:HJD60621.1;Name=HJD60621.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017443409.1;locus_tag=LFV90_00255;product=NAD(P)(+) transhydrogenase (Re/Si-specific) subunit beta;protein_id=HJD60621.1;transl_table=11 DYDR01000001.1 tpg gene 42625 43362 . - . ID=gene-LFV90_00260;Name=LFV90_00260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_00260 DYDR01000001.1 Protein Homology CDS 42625 43362 . - 0 ID=cds-HJD60622.1;Parent=gene-LFV90_00260;Dbxref=NCBI_GP:HJD60622.1;Name=HJD60622.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011270415.1;locus_tag=LFV90_00260;product=outer membrane beta-barrel protein;protein_id=HJD60622.1;transl_table=11 DYDR01000001.1 tpg gene 43513 44388 . + . ID=gene-LFV90_00265;Name=LFV90_00265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_00265 DYDR01000001.1 Protein Homology CDS 43513 44388 . + 0 ID=cds-HJD60623.1;Parent=gene-LFV90_00265;Dbxref=NCBI_GP:HJD60623.1;Name=HJD60623.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011476717.1;locus_tag=LFV90_00265;product=DMT family transporter;protein_id=HJD60623.1;transl_table=11 DYDR01000001.1 tpg gene 44385 45629 . + . ID=gene-LFV90_00270;Name=LFV90_00270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_00270 DYDR01000001.1 Protein Homology CDS 44385 45629 . + 0 ID=cds-HJD60624.1;Parent=gene-LFV90_00270;Dbxref=NCBI_GP:HJD60624.1;Name=HJD60624.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012151486.1;locus_tag=LFV90_00270;product=MFS transporter;protein_id=HJD60624.1;transl_table=11 DYDR01000001.1 tpg gene 45885 45959 . + . ID=gene-LFV90_00275;Name=LFV90_00275;gbkey=Gene;gene_biotype=tRNA;locus_tag=LFV90_00275 DYDR01000001.1 tRNAscan-SE tRNA 45885 45959 . + . ID=rna-LFV90_00275;Parent=gene-LFV90_00275;anticodon=(pos:45917..45919);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=LFV90_00275;product=tRNA-Thr DYDR01000001.1 tRNAscan-SE exon 45885 45959 . + . ID=exon-LFV90_00275-1;Parent=rna-LFV90_00275;anticodon=(pos:45917..45919);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=LFV90_00275;product=tRNA-Thr DYDR01000001.1 tpg gene 45983 46213 . - . ID=gene-LFV90_00280;Name=LFV90_00280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_00280 DYDR01000001.1 Protein Homology CDS 45983 46213 . - 0 ID=cds-HJD60625.1;Parent=gene-LFV90_00280;Dbxref=NCBI_GP:HJD60625.1;Name=HJD60625.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011476715.1;locus_tag=LFV90_00280;product=BolA family transcriptional regulator;protein_id=HJD60625.1;transl_table=11 DYDR01000001.1 tpg gene 46333 46659 . + . ID=gene-LFV90_00285;Name=rsfS;gbkey=Gene;gene=rsfS;gene_biotype=protein_coding;locus_tag=LFV90_00285 DYDR01000001.1 Protein Homology CDS 46333 46659 . + 0 ID=cds-HJD60626.1;Parent=gene-LFV90_00285;Dbxref=NCBI_GP:HJD60626.1;Name=HJD60626.1;gbkey=CDS;gene=rsfS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014412251.1;locus_tag=LFV90_00285;product=ribosome silencing factor;protein_id=HJD60626.1;transl_table=11 DYDR01000001.1 tpg gene 46678 48405 . + . ID=gene-LFV90_00290;Name=LFV90_00290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_00290 DYDR01000001.1 Protein Homology CDS 46678 48405 . + 0 ID=cds-HJD60627.1;Parent=gene-LFV90_00290;Dbxref=NCBI_GP:HJD60627.1;Name=HJD60627.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014364245.1;locus_tag=LFV90_00290;product=monovalent cation:proton antiporter-2 (CPA2) family protein;protein_id=HJD60627.1;transl_table=11 DYDR01000001.1 tpg gene 48398 48877 . + . ID=gene-LFV90_00295;Name=LFV90_00295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_00295 DYDR01000001.1 Protein Homology CDS 48398 48877 . + 0 ID=cds-HJD60628.1;Parent=gene-LFV90_00295;Dbxref=NCBI_GP:HJD60628.1;Name=HJD60628.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014392828.1;locus_tag=LFV90_00295;product=SH3 domain-containing protein;protein_id=HJD60628.1;transl_table=11 DYDR01000001.1 tpg gene 49141 50244 . - . ID=gene-LFV90_00300;Name=LFV90_00300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_00300 DYDR01000001.1 Protein Homology CDS 49141 50244 . - 0 ID=cds-HJD60629.1;Parent=gene-LFV90_00300;Dbxref=NCBI_GP:HJD60629.1;Name=HJD60629.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011476711.1;locus_tag=LFV90_00300;product=class I SAM-dependent methyltransferase;protein_id=HJD60629.1;transl_table=11 DYDR01000001.1 tpg gene 50223 51014 . - . ID=gene-LFV90_00305;Name=lgt;gbkey=Gene;gene=lgt;gene_biotype=protein_coding;locus_tag=LFV90_00305 DYDR01000001.1 Protein Homology CDS 50223 51014 . - 0 ID=cds-HJD60630.1;Parent=gene-LFV90_00305;Dbxref=NCBI_GP:HJD60630.1;Name=HJD60630.1;gbkey=CDS;gene=lgt;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011476710.1;locus_tag=LFV90_00305;product=prolipoprotein diacylglyceryl transferase;protein_id=HJD60630.1;transl_table=11 DYDR01000001.1 tpg gene 51125 52291 . + . ID=gene-LFV90_00310;Name=LFV90_00310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_00310 DYDR01000001.1 Protein Homology CDS 51125 52291 . + 0 ID=cds-HJD60631.1;Parent=gene-LFV90_00310;Dbxref=NCBI_GP:HJD60631.1;Name=HJD60631.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017443543.1;locus_tag=LFV90_00310;product=mechanosensitive ion channel family protein;protein_id=HJD60631.1;transl_table=11 DYDR01000001.1 tpg gene 52584 54263 . + . ID=gene-LFV90_00315;Name=yidC;gbkey=Gene;gene=yidC;gene_biotype=protein_coding;locus_tag=LFV90_00315 DYDR01000001.1 Protein Homology CDS 52584 54263 . + 0 ID=cds-HJD60632.1;Parent=gene-LFV90_00315;Dbxref=NCBI_GP:HJD60632.1;Name=HJD60632.1;gbkey=CDS;gene=yidC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011476707.1;locus_tag=LFV90_00315;product=membrane protein insertase YidC;protein_id=HJD60632.1;transl_table=11 DYDR01000001.1 tpg gene 54287 54832 . + . ID=gene-LFV90_00320;Name=pgsA;gbkey=Gene;gene=pgsA;gene_biotype=protein_coding;locus_tag=LFV90_00320 DYDR01000001.1 Protein Homology CDS 54287 54832 . + 0 ID=cds-HJD60633.1;Parent=gene-LFV90_00320;Dbxref=NCBI_GP:HJD60633.1;Name=HJD60633.1;gbkey=CDS;gene=pgsA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011476706.1;locus_tag=LFV90_00320;product=CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase;protein_id=HJD60633.1;transl_table=11 DYDR01000001.1 tpg gene 54851 55345 . + . ID=gene-LFV90_00325;Name=LFV90_00325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_00325 DYDR01000001.1 Protein Homology CDS 54851 55345 . + 0 ID=cds-HJD60634.1;Parent=gene-LFV90_00325;Dbxref=NCBI_GP:HJD60634.1;Name=HJD60634.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011476705.1;locus_tag=LFV90_00325;product=hypothetical protein;protein_id=HJD60634.1;transl_table=11 DYDR01000001.1 tpg pseudogene 55633 56653 . + . ID=gene-LFV90_00330;Name=LFV90_00330;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LFV90_00330;pseudo=true DYDR01000001.1 Protein Homology CDS 55633 56653 . + 0 ID=cds-LFV90_00330;Parent=gene-LFV90_00330;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013884.2;locus_tag=LFV90_00330;product=acyltransferase;pseudo=true;transl_table=11 DYDR01000001.1 tpg gene 56831 57022 . - . ID=gene-LFV90_00335;Name=LFV90_00335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_00335 DYDR01000001.1 Protein Homology CDS 56831 57022 . - 0 ID=cds-HJD60635.1;Parent=gene-LFV90_00335;Dbxref=NCBI_GP:HJD60635.1;Name=HJD60635.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016876.2;locus_tag=LFV90_00335;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=HJD60635.1;transl_table=11 DYDR01000001.1 tpg gene 57156 57404 . - . ID=gene-LFV90_00340;Name=LFV90_00340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_00340 DYDR01000001.1 Protein Homology CDS 57156 57404 . - 0 ID=cds-HJD60636.1;Parent=gene-LFV90_00340;Dbxref=NCBI_GP:HJD60636.1;Name=HJD60636.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002057569.1;locus_tag=LFV90_00340;product=type II toxin-antitoxin system Phd/YefM family antitoxin;protein_id=HJD60636.1;transl_table=11 DYDR01000001.1 tpg gene 57596 57931 . + . ID=gene-LFV90_00345;Name=umuD;gbkey=Gene;gene=umuD;gene_biotype=protein_coding;locus_tag=LFV90_00345 DYDR01000001.1 Protein Homology CDS 57596 57931 . + 0 ID=cds-HJD60637.1;Parent=gene-LFV90_00345;Dbxref=NCBI_GP:HJD60637.1;Name=HJD60637.1;gbkey=CDS;gene=umuD;inference=COORDINATES: protein motif:HMM:NF007621.2;locus_tag=LFV90_00345;product=translesion error-prone DNA polymerase V autoproteolytic subunit;protein_id=HJD60637.1;transl_table=11 DYDR01000001.1 tpg gene 57954 61082 . - . ID=gene-LFV90_00350;Name=LFV90_00350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_00350 DYDR01000001.1 Protein Homology CDS 57954 61082 . - 0 ID=cds-HJD60638.1;Parent=gene-LFV90_00350;Dbxref=NCBI_GP:HJD60638.1;Name=HJD60638.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011476701.1;locus_tag=LFV90_00350;product=FAD-dependent oxidoreductase;protein_id=HJD60638.1;transl_table=11 DYDR01000001.1 tpg gene 61079 61855 . - . ID=gene-LFV90_00355;Name=LFV90_00355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_00355 DYDR01000001.1 Protein Homology CDS 61079 61855 . - 0 ID=cds-HJD60639.1;Parent=gene-LFV90_00355;Dbxref=NCBI_GP:HJD60639.1;Name=HJD60639.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012736333.1;locus_tag=LFV90_00355;product=ABC transporter permease;protein_id=HJD60639.1;transl_table=11 DYDR01000001.1 tpg gene 61852 62598 . - . ID=gene-LFV90_00360;Name=LFV90_00360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_00360 DYDR01000001.1 Protein Homology CDS 61852 62598 . - 0 ID=cds-HJD60640.1;Parent=gene-LFV90_00360;Dbxref=NCBI_GP:HJD60640.1;Name=HJD60640.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004596706.1;locus_tag=LFV90_00360;product=ABC transporter ATP-binding protein;protein_id=HJD60640.1;transl_table=11 DYDR01000001.1 tpg gene 62610 62927 . - . ID=gene-LFV90_00365;Name=trxA;gbkey=Gene;gene=trxA;gene_biotype=protein_coding;locus_tag=LFV90_00365 DYDR01000001.1 Protein Homology CDS 62610 62927 . - 0 ID=cds-HJD60641.1;Parent=gene-LFV90_00365;Dbxref=NCBI_GP:HJD60641.1;Name=HJD60641.1;gbkey=CDS;gene=trxA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004997015.1;locus_tag=LFV90_00365;product=thioredoxin;protein_id=HJD60641.1;transl_table=11 DYDR01000001.1 tpg gene 62996 63823 . - . ID=gene-LFV90_00370;Name=LFV90_00370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_00370 DYDR01000001.1 Protein Homology CDS 62996 63823 . - 0 ID=cds-HJD60642.1;Parent=gene-LFV90_00370;Dbxref=NCBI_GP:HJD60642.1;Name=HJD60642.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014363489.1;locus_tag=LFV90_00370;product=kinase/pyrophosphorylase;protein_id=HJD60642.1;transl_table=11 DYDR01000001.1 tpg gene 64223 65245 . + . ID=gene-LFV90_00375;Name=hemE;gbkey=Gene;gene=hemE;gene_biotype=protein_coding;locus_tag=LFV90_00375 DYDR01000001.1 Protein Homology CDS 64223 65245 . + 0 ID=cds-HJD60643.1;Parent=gene-LFV90_00375;Dbxref=NCBI_GP:HJD60643.1;Name=HJD60643.1;gbkey=CDS;gene=hemE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012152318.1;locus_tag=LFV90_00375;product=uroporphyrinogen decarboxylase;protein_id=HJD60643.1;transl_table=11 DYDR01000001.1 tpg gene 65232 66296 . + . ID=gene-LFV90_00380;Name=hemH;gbkey=Gene;gene=hemH;gene_biotype=protein_coding;locus_tag=LFV90_00380 DYDR01000001.1 Protein Homology CDS 65232 66296 . + 0 ID=cds-HJD60644.1;Parent=gene-LFV90_00380;Dbxref=NCBI_GP:HJD60644.1;Name=HJD60644.1;gbkey=CDS;gene=hemH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011478078.1;locus_tag=LFV90_00380;product=ferrochelatase;protein_id=HJD60644.1;transl_table=11 DYDR01000001.1 tpg gene 66322 66759 . + . ID=gene-LFV90_00385;Name=hemJ;gbkey=Gene;gene=hemJ;gene_biotype=protein_coding;locus_tag=LFV90_00385 DYDR01000001.1 Protein Homology CDS 66322 66759 . + 0 ID=cds-HJD60645.1;Parent=gene-LFV90_00385;Dbxref=NCBI_GP:HJD60645.1;Name=HJD60645.1;gbkey=CDS;gene=hemJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017442793.1;locus_tag=LFV90_00385;product=protoporphyrinogen oxidase HemJ;protein_id=HJD60645.1;transl_table=11 DYDR01000001.1 tpg gene 66801 67256 . - . ID=gene-LFV90_00390;Name=LFV90_00390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_00390 DYDR01000001.1 Protein Homology CDS 66801 67256 . - 0 ID=cds-HJD60646.1;Parent=gene-LFV90_00390;Dbxref=NCBI_GP:HJD60646.1;Name=HJD60646.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011478076.1;locus_tag=LFV90_00390;product=nucleoside deaminase;protein_id=HJD60646.1;transl_table=11 DYDR01000001.1 tpg gene 67253 68158 . - . ID=gene-LFV90_00395;Name=LFV90_00395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_00395 DYDR01000001.1 Protein Homology CDS 67253 68158 . - 0 ID=cds-HJD60647.1;Parent=gene-LFV90_00395;Dbxref=NCBI_GP:HJD60647.1;Name=HJD60647.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004596826.1;locus_tag=LFV90_00395;product=cation diffusion facilitator family transporter;protein_id=HJD60647.1;transl_table=11 DYDR01000001.1 tpg gene 68419 68898 . + . ID=gene-LFV90_00400;Name=LFV90_00400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_00400 DYDR01000001.1 Protein Homology CDS 68419 68898 . + 0 ID=cds-HJD60648.1;Parent=gene-LFV90_00400;Dbxref=NCBI_GP:HJD60648.1;Name=HJD60648.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011478074.1;locus_tag=LFV90_00400;product=glycine zipper 2TM domain-containing protein;protein_id=HJD60648.1;transl_table=11 DYDR01000001.1 tpg gene 68907 69059 . - . ID=gene-LFV90_00405;Name=LFV90_00405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_00405 DYDR01000001.1 Protein Homology CDS 68907 69059 . - 0 ID=cds-HJD60649.1;Parent=gene-LFV90_00405;Dbxref=NCBI_GP:HJD60649.1;Name=HJD60649.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR03777.1;locus_tag=LFV90_00405;product=palindromic element RPE4 domain-containing protein;protein_id=HJD60649.1;transl_table=11 DYDR01000001.1 tpg gene 69084 69548 . + . ID=gene-LFV90_00410;Name=LFV90_00410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_00410 DYDR01000001.1 Protein Homology CDS 69084 69548 . + 0 ID=cds-HJD60650.1;Parent=gene-LFV90_00410;Dbxref=NCBI_GP:HJD60650.1;Name=HJD60650.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010977848.1;locus_tag=LFV90_00410;product=YbhB/YbcL family Raf kinase inhibitor-like protein;protein_id=HJD60650.1;transl_table=11 DYDR01000001.1 tpg gene 69548 69715 . + . ID=gene-LFV90_00415;Name=LFV90_00415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_00415 DYDR01000001.1 GeneMarkS-2+ CDS 69548 69715 . + 0 ID=cds-HJD60651.1;Parent=gene-LFV90_00415;Dbxref=NCBI_GP:HJD60651.1;Name=HJD60651.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_00415;product=hypothetical protein;protein_id=HJD60651.1;transl_table=11 DYDR01000001.1 tpg gene 69719 70420 . + . ID=gene-LFV90_00420;Name=LFV90_00420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_00420 DYDR01000001.1 Protein Homology CDS 69719 70420 . + 0 ID=cds-HJD60652.1;Parent=gene-LFV90_00420;Dbxref=NCBI_GP:HJD60652.1;Name=HJD60652.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011478072.1;locus_tag=LFV90_00420;product=metal ABC transporter ATP-binding protein;protein_id=HJD60652.1;transl_table=11 DYDR01000001.1 tpg gene 70454 70918 . - . ID=gene-LFV90_00425;Name=LFV90_00425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_00425 DYDR01000001.1 Protein Homology CDS 70454 70918 . - 0 ID=cds-HJD60653.1;Parent=gene-LFV90_00425;Dbxref=NCBI_GP:HJD60653.1;Name=HJD60653.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014409737.1;locus_tag=LFV90_00425;product=DNA polymerase III subunit chi;protein_id=HJD60653.1;transl_table=11 DYDR01000001.1 tpg gene 70957 71041 . - . ID=gene-LFV90_00430;Name=LFV90_00430;gbkey=Gene;gene_biotype=tRNA;locus_tag=LFV90_00430 DYDR01000001.1 tRNAscan-SE tRNA 70957 71041 . - . ID=rna-LFV90_00430;Parent=gene-LFV90_00430;anticodon=(pos:complement(71005..71007));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=LFV90_00430;product=tRNA-Leu DYDR01000001.1 tRNAscan-SE exon 70957 71041 . - . ID=exon-LFV90_00430-1;Parent=rna-LFV90_00430;anticodon=(pos:complement(71005..71007));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=LFV90_00430;product=tRNA-Leu DYDR01000001.1 tpg gene 71242 72378 . - . ID=gene-LFV90_00435;Name=dapE;gbkey=Gene;gene=dapE;gene_biotype=protein_coding;locus_tag=LFV90_00435 DYDR01000001.1 Protein Homology CDS 71242 72378 . - 0 ID=cds-HJD60654.1;Parent=gene-LFV90_00435;Dbxref=NCBI_GP:HJD60654.1;Name=HJD60654.1;gbkey=CDS;gene=dapE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004596737.1;locus_tag=LFV90_00435;product=succinyl-diaminopimelate desuccinylase;protein_id=HJD60654.1;transl_table=11 DYDR01000001.1 tpg gene 72419 72565 . - . ID=gene-LFV90_00440;Name=LFV90_00440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_00440 DYDR01000001.1 GeneMarkS-2+ CDS 72419 72565 . - 0 ID=cds-HJD60655.1;Parent=gene-LFV90_00440;Dbxref=NCBI_GP:HJD60655.1;Name=HJD60655.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_00440;product=hypothetical protein;protein_id=HJD60655.1;transl_table=11 DYDR01000001.1 tpg pseudogene 72643 73334 . - . ID=gene-LFV90_00445;Name=LFV90_00445;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LFV90_00445;pseudo=true DYDR01000001.1 Protein Homology CDS 72643 73334 . - 0 ID=cds-LFV90_00445;Parent=gene-LFV90_00445;Note=frameshifted;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014442.2;locus_tag=LFV90_00445;product=N-6 DNA methylase;pseudo=true;transl_table=11 DYDR01000001.1 tpg gene 73507 74160 . - . ID=gene-LFV90_00450;Name=LFV90_00450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_00450 DYDR01000001.1 Protein Homology CDS 73507 74160 . - 0 ID=cds-HJD60656.1;Parent=gene-LFV90_00450;Dbxref=NCBI_GP:HJD60656.1;Name=HJD60656.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024976.2;locus_tag=LFV90_00450;product=type I restriction enzyme HsdR N-terminal domain-containing protein;protein_id=HJD60656.1;transl_table=11 DYDR01000001.1 tpg gene 74364 75530 . + . ID=gene-LFV90_00455;Name=nhaA;gbkey=Gene;gene=nhaA;gene_biotype=protein_coding;locus_tag=LFV90_00455 DYDR01000001.1 Protein Homology CDS 74364 75530 . + 0 ID=cds-HJD60657.1;Parent=gene-LFV90_00455;Dbxref=NCBI_GP:HJD60657.1;Name=HJD60657.1;gbkey=CDS;gene=nhaA;inference=COORDINATES: protein motif:HMM:NF018648.2;locus_tag=LFV90_00455;product=Na+/H+ antiporter NhaA;protein_id=HJD60657.1;transl_table=11 DYDR01000001.1 tpg gene 75613 75810 . + . ID=gene-LFV90_00460;Name=LFV90_00460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_00460 DYDR01000001.1 Protein Homology CDS 75613 75810 . + 0 ID=cds-HJD60658.1;Parent=gene-LFV90_00460;Dbxref=NCBI_GP:HJD60658.1;Name=HJD60658.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014409024.1;locus_tag=LFV90_00460;product=entericidin A/B family lipoprotein;protein_id=HJD60658.1;transl_table=11 DYDR01000001.1 tpg gene 75868 76317 . - . ID=gene-LFV90_00465;Name=LFV90_00465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_00465 DYDR01000001.1 Protein Homology CDS 75868 76317 . - 0 ID=cds-HJD60659.1;Parent=gene-LFV90_00465;Dbxref=NCBI_GP:HJD60659.1;Name=HJD60659.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012593.2;locus_tag=LFV90_00465;product=dicarboxylate/amino acid:cation symporter;protein_id=HJD60659.1;transl_table=11 DYDR01000001.1 tpg gene 77161 77322 . - . ID=gene-LFV90_00470;Name=LFV90_00470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_00470 DYDR01000001.1 GeneMarkS-2+ CDS 77161 77322 . - 0 ID=cds-HJD60660.1;Parent=gene-LFV90_00470;Dbxref=NCBI_GP:HJD60660.1;Name=HJD60660.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_00470;product=hypothetical protein;protein_id=HJD60660.1;transl_table=11 DYDR01000001.1 tpg gene 77325 77594 . - . ID=gene-LFV90_00475;Name=LFV90_00475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_00475 DYDR01000001.1 Protein Homology CDS 77325 77594 . - 0 ID=cds-HJD60661.1;Parent=gene-LFV90_00475;Dbxref=NCBI_GP:HJD60661.1;Name=HJD60661.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024194.2;locus_tag=LFV90_00475;product=Rpn family recombination-promoting nuclease/putative transposase;protein_id=HJD60661.1;transl_table=11 DYDR01000001.1 tpg gene 77659 78501 . - . ID=gene-LFV90_00480;Name=rsmI;gbkey=Gene;gene=rsmI;gene_biotype=protein_coding;locus_tag=LFV90_00480 DYDR01000001.1 Protein Homology CDS 77659 78501 . - 0 ID=cds-HJD60662.1;Parent=gene-LFV90_00480;Dbxref=NCBI_GP:HJD60662.1;Name=HJD60662.1;gbkey=CDS;gene=rsmI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014412348.1;locus_tag=LFV90_00480;product=16S rRNA (cytidine(1402)-2'-O)-methyltransferase;protein_id=HJD60662.1;transl_table=11 DYDR01000001.1 tpg gene 78527 79645 . + . ID=gene-LFV90_00485;Name=LFV90_00485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_00485 DYDR01000001.1 Protein Homology CDS 78527 79645 . + 0 ID=cds-HJD60663.1;Parent=gene-LFV90_00485;Dbxref=NCBI_GP:HJD60663.1;Name=HJD60663.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014014756.1;locus_tag=LFV90_00485;product=penicillin-binding protein activator;protein_id=HJD60663.1;transl_table=11 DYDR01000001.1 tpg pseudogene 79724 79801 . - . ID=gene-LFV90_00490;Name=LFV90_00490;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LFV90_00490;pseudo=true DYDR01000001.1 Protein Homology CDS 79724 79801 . - 0 ID=cds-LFV90_00490;Parent=gene-LFV90_00490;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR03777.1;locus_tag=LFV90_00490;product=palindromic element RPE4 domain-containing protein;pseudo=true;transl_table=11 ##sequence-region DYDR01000002.1 1 7445 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2866300 DYDR01000002.1 tpg region 1 7445 . + . ID=DYDR01000002.1:1..7445;Dbxref=taxon:2866300;collection-date=2001-12-01;country=Madagascar: Toliara;environmental-sample=true;gbkey=Src;isolate=Choog2;isolation-source=Insect;metagenome-source=insect metagenome;metagenomic=true;mol_type=genomic DNA;nat-host=Columbicola hoogstraali DYDR01000002.1 tpg gene 285 341 . - . ID=gene-LFV90_00495;Name=LFV90_00495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_00495 DYDR01000002.1 Protein Homology CDS 285 341 . - 0 ID=cds-HJD60664.1;Parent=gene-LFV90_00495;Dbxref=NCBI_GP:HJD60664.1;Name=HJD60664.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR03776.1;locus_tag=LFV90_00495;product=hypothetical protein;protein_id=HJD60664.1;transl_table=11 DYDR01000002.1 tpg pseudogene 544 726 . - . ID=gene-LFV90_00500;Name=LFV90_00500;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LFV90_00500;pseudo=true DYDR01000002.1 Protein Homology CDS 544 726 . - 0 ID=cds-LFV90_00500;Parent=gene-LFV90_00500;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477182.1;locus_tag=LFV90_00500;product=Rpn family recombination-promoting nuclease/putative transposase;pseudo=true;transl_table=11 DYDR01000002.1 tpg gene 828 1418 . - . ID=gene-LFV90_00505;Name=LFV90_00505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_00505 DYDR01000002.1 Protein Homology CDS 828 1418 . - 0 ID=cds-HJD60665.1;Parent=gene-LFV90_00505;Dbxref=NCBI_GP:HJD60665.1;Name=HJD60665.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477183.1;locus_tag=LFV90_00505;product=ribonuclease HII;protein_id=HJD60665.1;transl_table=11 DYDR01000002.1 tpg gene 1476 1976 . + . ID=gene-LFV90_00510;Name=hscB;gbkey=Gene;gene=hscB;gene_biotype=protein_coding;locus_tag=LFV90_00510 DYDR01000002.1 Protein Homology CDS 1476 1976 . + 0 ID=cds-HJD60666.1;Parent=gene-LFV90_00510;Dbxref=NCBI_GP:HJD60666.1;Name=HJD60666.1;gbkey=CDS;gene=hscB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011190662.1;locus_tag=LFV90_00510;product=co-chaperone HscB;protein_id=HJD60666.1;transl_table=11 DYDR01000002.1 tpg gene 1967 3754 . + . ID=gene-LFV90_00515;Name=hscA;gbkey=Gene;gene=hscA;gene_biotype=protein_coding;locus_tag=LFV90_00515 DYDR01000002.1 Protein Homology CDS 1967 3754 . + 0 ID=cds-HJD60667.1;Parent=gene-LFV90_00515;Dbxref=NCBI_GP:HJD60667.1;Name=HJD60667.1;gbkey=CDS;gene=hscA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010886232.1;locus_tag=LFV90_00515;product=Fe-S protein assembly chaperone HscA;protein_id=HJD60667.1;transl_table=11 DYDR01000002.1 tpg gene 3742 3840 . - . ID=gene-LFV90_00520;Name=LFV90_00520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_00520 DYDR01000002.1 Protein Homology CDS 3742 3840 . - 0 ID=cds-HJD60668.1;Parent=gene-LFV90_00520;Dbxref=NCBI_GP:HJD60668.1;Name=HJD60668.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR01045.1;locus_tag=LFV90_00520;product=palindromic element RPE1 domain-containing protein;protein_id=HJD60668.1;transl_table=11 DYDR01000002.1 tpg gene 3893 4228 . + . ID=gene-LFV90_00525;Name=LFV90_00525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_00525 DYDR01000002.1 Protein Homology CDS 3893 4228 . + 0 ID=cds-HJD60669.1;Parent=gene-LFV90_00525;Dbxref=NCBI_GP:HJD60669.1;Name=HJD60669.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477186.1;locus_tag=LFV90_00525;product=ferredoxin family 2Fe-2S iron-sulfur cluster binding protein;protein_id=HJD60669.1;transl_table=11 DYDR01000002.1 tpg gene 4239 5321 . + . ID=gene-LFV90_00530;Name=LFV90_00530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_00530 DYDR01000002.1 Protein Homology CDS 4239 5321 . + 0 ID=cds-HJD60670.1;Parent=gene-LFV90_00530;Dbxref=NCBI_GP:HJD60670.1;Name=HJD60670.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012150477.1;locus_tag=LFV90_00530;product=hypothetical protein;protein_id=HJD60670.1;transl_table=11 DYDR01000002.1 tpg gene 5326 6282 . + . ID=gene-LFV90_00535;Name=LFV90_00535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_00535 DYDR01000002.1 Protein Homology CDS 5326 6282 . + 0 ID=cds-HJD60671.1;Parent=gene-LFV90_00535;Dbxref=NCBI_GP:HJD60671.1;Name=HJD60671.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477188.1;locus_tag=LFV90_00535;product=TAXI family TRAP transporter solute-binding subunit;protein_id=HJD60671.1;transl_table=11 DYDR01000002.1 tpg gene 6313 6744 . + . ID=gene-LFV90_00540;Name=LFV90_00540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_00540 DYDR01000002.1 Protein Homology CDS 6313 6744 . + 0 ID=cds-HJD60672.1;Parent=gene-LFV90_00540;Dbxref=NCBI_GP:HJD60672.1;Name=HJD60672.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012151759.1;locus_tag=LFV90_00540;product=universal stress protein;protein_id=HJD60672.1;transl_table=11 ##sequence-region DYDR01000003.1 1 259305 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2866300 DYDR01000003.1 tpg region 1 259305 . + . ID=DYDR01000003.1:1..259305;Dbxref=taxon:2866300;collection-date=2001-12-01;country=Madagascar: Toliara;environmental-sample=true;gbkey=Src;isolate=Choog2;isolation-source=Insect;metagenome-source=insect metagenome;metagenomic=true;mol_type=genomic DNA;nat-host=Columbicola hoogstraali DYDR01000003.1 tpg pseudogene 62 142 . - . ID=gene-LFV90_00545;Name=LFV90_00545;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LFV90_00545;pseudo=true DYDR01000003.1 Protein Homology CDS 62 142 . - 0 ID=cds-LFV90_00545;Parent=gene-LFV90_00545;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012152151.1;locus_tag=LFV90_00545;product=nucleotidyltransferase;pseudo=true;transl_table=11 DYDR01000003.1 tpg gene 165 524 . - . ID=gene-LFV90_00550;Name=LFV90_00550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_00550 DYDR01000003.1 Protein Homology CDS 165 524 . - 0 ID=cds-HJD60673.1;Parent=gene-LFV90_00550;Dbxref=NCBI_GP:HJD60673.1;Name=HJD60673.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010420663.1;locus_tag=LFV90_00550;product=type II toxin-antitoxin system PemK/MazF family toxin;protein_id=HJD60673.1;transl_table=11 DYDR01000003.1 tpg gene 500 805 . - . ID=gene-LFV90_00555;Name=LFV90_00555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_00555 DYDR01000003.1 Protein Homology CDS 500 805 . - 0 ID=cds-HJD60674.1;Parent=gene-LFV90_00555;Dbxref=NCBI_GP:HJD60674.1;Name=HJD60674.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010420659.1;locus_tag=LFV90_00555;product=ribbon-helix-helix domain-containing protein;protein_id=HJD60674.1;transl_table=11 DYDR01000003.1 tpg gene 806 961 . - . ID=gene-LFV90_00560;Name=LFV90_00560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_00560 DYDR01000003.1 Protein Homology CDS 806 961 . - 0 ID=cds-HJD60675.1;Parent=gene-LFV90_00560;Dbxref=NCBI_GP:HJD60675.1;Name=HJD60675.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011478060.1;locus_tag=LFV90_00560;product=Sec-independent protein translocase subunit TatA;protein_id=HJD60675.1;transl_table=11 DYDR01000003.1 tpg gene 1029 1628 . + . ID=gene-LFV90_00565;Name=LFV90_00565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_00565 DYDR01000003.1 Protein Homology CDS 1029 1628 . + 0 ID=cds-HJD60676.1;Parent=gene-LFV90_00565;Dbxref=NCBI_GP:HJD60676.1;Name=HJD60676.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011478059.1;locus_tag=LFV90_00565;product=phosphatidylglycerophosphatase A;protein_id=HJD60676.1;transl_table=11 DYDR01000003.1 tpg pseudogene 2144 2851 . + . ID=gene-LFV90_00570;Name=LFV90_00570;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LFV90_00570;pseudo=true DYDR01000003.1 Protein Homology CDS 2144 2851 . + 0 ID=cds-LFV90_00570;Parent=gene-LFV90_00570;Note=internal stop;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012571.2;locus_tag=LFV90_00570;product=phenylalanine 4-monooxygenase;pseudo=true;transl_table=11 DYDR01000003.1 tpg pseudogene 2880 3221 . + . ID=gene-LFV90_00575;Name=LFV90_00575;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LFV90_00575;pseudo=true DYDR01000003.1 Protein Homology CDS 2880 3221 . + 0 ID=cds-LFV90_00575;Parent=gene-LFV90_00575;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014364507.1;locus_tag=LFV90_00575;product=4a-hydroxytetrahydrobiopterin dehydratase;pseudo=true;transl_table=11 DYDR01000003.1 tpg gene 3484 3801 . + . ID=gene-LFV90_00580;Name=rplU;gbkey=Gene;gene=rplU;gene_biotype=protein_coding;locus_tag=LFV90_00580 DYDR01000003.1 Protein Homology CDS 3484 3801 . + 0 ID=cds-HJD60677.1;Parent=gene-LFV90_00580;Dbxref=NCBI_GP:HJD60677.1;Name=HJD60677.1;gbkey=CDS;gene=rplU;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014365432.1;locus_tag=LFV90_00580;product=50S ribosomal protein L21;protein_id=HJD60677.1;transl_table=11 DYDR01000003.1 tpg gene 3841 4101 . + . ID=gene-LFV90_00585;Name=rpmA;gbkey=Gene;gene=rpmA;gene_biotype=protein_coding;locus_tag=LFV90_00585 DYDR01000003.1 Protein Homology CDS 3841 4101 . + 0 ID=cds-HJD60678.1;Parent=gene-LFV90_00585;Dbxref=NCBI_GP:HJD60678.1;Name=HJD60678.1;gbkey=CDS;gene=rpmA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014364190.1;locus_tag=LFV90_00585;product=50S ribosomal protein L27;protein_id=HJD60678.1;transl_table=11 DYDR01000003.1 tpg gene 4577 5797 . + . ID=gene-LFV90_00590;Name=LFV90_00590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_00590 DYDR01000003.1 Protein Homology CDS 4577 5797 . + 0 ID=cds-HJD60679.1;Parent=gene-LFV90_00590;Dbxref=NCBI_GP:HJD60679.1;Name=HJD60679.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012152307.1;locus_tag=LFV90_00590;product=aspartate kinase;protein_id=HJD60679.1;transl_table=11 DYDR01000003.1 tpg gene 6034 6516 . + . ID=gene-LFV90_00595;Name=LFV90_00595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_00595 DYDR01000003.1 Protein Homology CDS 6034 6516 . + 0 ID=cds-HJD60680.1;Parent=gene-LFV90_00595;Dbxref=NCBI_GP:HJD60680.1;Name=HJD60680.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011478053.1;locus_tag=LFV90_00595;product=hypothetical protein;protein_id=HJD60680.1;transl_table=11 DYDR01000003.1 tpg gene 6526 6747 . + . ID=gene-LFV90_00600;Name=LFV90_00600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_00600 DYDR01000003.1 Protein Homology CDS 6526 6747 . + 0 ID=cds-HJD60681.1;Parent=gene-LFV90_00600;Dbxref=NCBI_GP:HJD60681.1;Name=HJD60681.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014392760.1;locus_tag=LFV90_00600;product=hypothetical protein;protein_id=HJD60681.1;transl_table=11 DYDR01000003.1 tpg gene 6805 6984 . + . ID=gene-LFV90_00605;Name=LFV90_00605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_00605 DYDR01000003.1 Protein Homology CDS 6805 6984 . + 0 ID=cds-HJD60682.1;Parent=gene-LFV90_00605;Dbxref=NCBI_GP:HJD60682.1;Name=HJD60682.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024118.2;locus_tag=LFV90_00605;product=MBL fold metallo-hydrolase;protein_id=HJD60682.1;transl_table=11 DYDR01000003.1 tpg gene 7033 7461 . + . ID=gene-LFV90_00610;Name=LFV90_00610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_00610 DYDR01000003.1 Protein Homology CDS 7033 7461 . + 0 ID=cds-HJD60683.1;Parent=gene-LFV90_00610;Dbxref=NCBI_GP:HJD60683.1;Name=HJD60683.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024118.2;locus_tag=LFV90_00610;product=hydrolase;protein_id=HJD60683.1;transl_table=11 DYDR01000003.1 tpg gene 7578 8081 . + . ID=gene-LFV90_00615;Name=LFV90_00615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_00615 DYDR01000003.1 GeneMarkS-2+ CDS 7578 8081 . + 0 ID=cds-HJD60684.1;Parent=gene-LFV90_00615;Dbxref=NCBI_GP:HJD60684.1;Name=HJD60684.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_00615;product=hypothetical protein;protein_id=HJD60684.1;transl_table=11 DYDR01000003.1 tpg gene 8593 8778 . + . ID=gene-LFV90_00620;Name=LFV90_00620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_00620 DYDR01000003.1 GeneMarkS-2+ CDS 8593 8778 . + 0 ID=cds-HJD60685.1;Parent=gene-LFV90_00620;Dbxref=NCBI_GP:HJD60685.1;Name=HJD60685.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_00620;product=hypothetical protein;protein_id=HJD60685.1;transl_table=11 DYDR01000003.1 tpg gene 8941 9393 . + . ID=gene-LFV90_00625;Name=LFV90_00625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_00625 DYDR01000003.1 Protein Homology CDS 8941 9393 . + 0 ID=cds-HJD60686.1;Parent=gene-LFV90_00625;Dbxref=NCBI_GP:HJD60686.1;Name=HJD60686.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016703.2;locus_tag=LFV90_00625;product=DUF637 domain-containing protein;protein_id=HJD60686.1;transl_table=11 DYDR01000003.1 tpg gene 9592 10884 . + . ID=gene-LFV90_00630;Name=tilS;gbkey=Gene;gene=tilS;gene_biotype=protein_coding;locus_tag=LFV90_00630 DYDR01000003.1 Protein Homology CDS 9592 10884 . + 0 ID=cds-HJD60687.1;Parent=gene-LFV90_00630;Dbxref=NCBI_GP:HJD60687.1;Name=HJD60687.1;gbkey=CDS;gene=tilS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011478044.1;locus_tag=LFV90_00630;product=tRNA lysidine(34) synthetase TilS;protein_id=HJD60687.1;transl_table=11 DYDR01000003.1 tpg gene 10952 12868 . + . ID=gene-LFV90_00635;Name=ftsH;gbkey=Gene;gene=ftsH;gene_biotype=protein_coding;locus_tag=LFV90_00635 DYDR01000003.1 Protein Homology CDS 10952 12868 . + 0 ID=cds-HJD60688.1;Parent=gene-LFV90_00635;Dbxref=NCBI_GP:HJD60688.1;Name=HJD60688.1;gbkey=CDS;gene=ftsH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011478043.1;locus_tag=LFV90_00635;product=ATP-dependent zinc metalloprotease FtsH;protein_id=HJD60688.1;transl_table=11 DYDR01000003.1 tpg pseudogene 12892 13106 . + . ID=gene-LFV90_00640;Name=LFV90_00640;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LFV90_00640;pseudo=true DYDR01000003.1 Protein Homology CDS 12892 13106 . + 0 ID=cds-LFV90_00640;Parent=gene-LFV90_00640;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012372.2;locus_tag=LFV90_00640;product=DNA cytosine methyltransferase;pseudo=true;transl_table=11 DYDR01000003.1 tpg gene 13173 13490 . + . ID=gene-LFV90_00645;Name=LFV90_00645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_00645 DYDR01000003.1 Protein Homology CDS 13173 13490 . + 0 ID=cds-HJD60689.1;Parent=gene-LFV90_00645;Dbxref=NCBI_GP:HJD60689.1;Name=HJD60689.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012372.2;locus_tag=LFV90_00645;product=DNA cytosine methyltransferase;protein_id=HJD60689.1;transl_table=11 DYDR01000003.1 tpg gene 13471 13788 . + . ID=gene-LFV90_00650;Name=LFV90_00650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_00650 DYDR01000003.1 Protein Homology CDS 13471 13788 . + 0 ID=cds-HJD60690.1;Parent=gene-LFV90_00650;Dbxref=NCBI_GP:HJD60690.1;Name=HJD60690.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011478041.1;locus_tag=LFV90_00650;product=hypothetical protein;protein_id=HJD60690.1;transl_table=11 DYDR01000003.1 tpg gene 14121 14906 . + . ID=gene-LFV90_00655;Name=LFV90_00655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_00655 DYDR01000003.1 Protein Homology CDS 14121 14906 . + 0 ID=cds-HJD60691.1;Parent=gene-LFV90_00655;Dbxref=NCBI_GP:HJD60691.1;Name=HJD60691.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011190559.1;locus_tag=LFV90_00655;product=succinate dehydrogenase iron-sulfur subunit;protein_id=HJD60691.1;transl_table=11 DYDR01000003.1 tpg gene 15248 15442 . - . ID=gene-LFV90_00660;Name=LFV90_00660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_00660 DYDR01000003.1 GeneMarkS-2+ CDS 15248 15442 . - 0 ID=cds-HJD60692.1;Parent=gene-LFV90_00660;Dbxref=NCBI_GP:HJD60692.1;Name=HJD60692.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_00660;product=hypothetical protein;protein_id=HJD60692.1;transl_table=11 DYDR01000003.1 tpg gene 15874 16299 . + . ID=gene-LFV90_00665;Name=LFV90_00665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_00665 DYDR01000003.1 Protein Homology CDS 15874 16299 . + 0 ID=cds-HJD60693.1;Parent=gene-LFV90_00665;Dbxref=NCBI_GP:HJD60693.1;Name=HJD60693.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014643.2;locus_tag=LFV90_00665;product=type II toxin-antitoxin system Phd/YefM family antitoxin;protein_id=HJD60693.1;transl_table=11 DYDR01000003.1 tpg gene 16480 18315 . - . ID=gene-LFV90_00670;Name=mutL;gbkey=Gene;gene=mutL;gene_biotype=protein_coding;locus_tag=LFV90_00670 DYDR01000003.1 Protein Homology CDS 16480 18315 . - 0 ID=cds-HJD60694.1;Parent=gene-LFV90_00670;Dbxref=NCBI_GP:HJD60694.1;Name=HJD60694.1;gbkey=CDS;gene=mutL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011478037.1;locus_tag=LFV90_00670;product=DNA mismatch repair endonuclease MutL;protein_id=HJD60694.1;transl_table=11 DYDR01000003.1 tpg gene 18312 18467 . - . ID=gene-LFV90_00675;Name=LFV90_00675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_00675 DYDR01000003.1 Protein Homology CDS 18312 18467 . - 0 ID=cds-HJD60695.1;Parent=gene-LFV90_00675;Dbxref=NCBI_GP:HJD60695.1;Name=HJD60695.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011191297.1;locus_tag=LFV90_00675;product=zinc-finger domain-containing protein;protein_id=HJD60695.1;transl_table=11 DYDR01000003.1 tpg gene 18778 19113 . + . ID=gene-LFV90_00680;Name=LFV90_00680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_00680 DYDR01000003.1 Protein Homology CDS 18778 19113 . + 0 ID=cds-HJD60696.1;Parent=gene-LFV90_00680;Dbxref=NCBI_GP:HJD60696.1;Name=HJD60696.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020243.2;locus_tag=LFV90_00680;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=HJD60696.1;transl_table=11 DYDR01000003.1 tpg gene 19120 19557 . + . ID=gene-LFV90_00685;Name=LFV90_00685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_00685 DYDR01000003.1 Protein Homology CDS 19120 19557 . + 0 ID=cds-HJD60697.1;Parent=gene-LFV90_00685;Dbxref=NCBI_GP:HJD60697.1;Name=HJD60697.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024950.2;locus_tag=LFV90_00685;product=SDR family oxidoreductase;protein_id=HJD60697.1;transl_table=11 DYDR01000003.1 tpg gene 19677 20600 . + . ID=gene-LFV90_00690;Name=LFV90_00690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_00690 DYDR01000003.1 Protein Homology CDS 19677 20600 . + 0 ID=cds-HJD60698.1;Parent=gene-LFV90_00690;Dbxref=NCBI_GP:HJD60698.1;Name=HJD60698.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011478034.1;locus_tag=LFV90_00690;product=hypothetical protein;protein_id=HJD60698.1;transl_table=11 DYDR01000003.1 tpg gene 20925 21698 . + . ID=gene-LFV90_00695;Name=LFV90_00695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_00695 DYDR01000003.1 GeneMarkS-2+ CDS 20925 21698 . + 0 ID=cds-HJD60699.1;Parent=gene-LFV90_00695;Dbxref=NCBI_GP:HJD60699.1;Name=HJD60699.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_00695;product=hypothetical protein;protein_id=HJD60699.1;transl_table=11 DYDR01000003.1 tpg gene 21881 23152 . + . ID=gene-LFV90_00700;Name=LFV90_00700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_00700 DYDR01000003.1 Protein Homology CDS 21881 23152 . + 0 ID=cds-HJD60700.1;Parent=gene-LFV90_00700;Dbxref=NCBI_GP:HJD60700.1;Name=HJD60700.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014408111.1;locus_tag=LFV90_00700;product=MFS transporter;protein_id=HJD60700.1;transl_table=11 DYDR01000003.1 tpg gene 23136 23975 . + . ID=gene-LFV90_00705;Name=hemF;gbkey=Gene;gene=hemF;gene_biotype=protein_coding;locus_tag=LFV90_00705 DYDR01000003.1 Protein Homology CDS 23136 23975 . + 0 ID=cds-HJD60701.1;Parent=gene-LFV90_00705;Dbxref=NCBI_GP:HJD60701.1;Name=HJD60701.1;gbkey=CDS;gene=hemF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011271693.1;locus_tag=LFV90_00705;product=oxygen-dependent coproporphyrinogen oxidase;protein_id=HJD60701.1;transl_table=11 DYDR01000003.1 tpg gene 24077 24247 . + . ID=gene-LFV90_00710;Name=rpmG;gbkey=Gene;gene=rpmG;gene_biotype=protein_coding;locus_tag=LFV90_00710 DYDR01000003.1 Protein Homology CDS 24077 24247 . + 0 ID=cds-HJD60702.1;Parent=gene-LFV90_00710;Dbxref=NCBI_GP:HJD60702.1;Name=HJD60702.1;gbkey=CDS;gene=rpmG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011256695.1;locus_tag=LFV90_00710;product=50S ribosomal protein L33;protein_id=HJD60702.1;transl_table=11 DYDR01000003.1 tpg gene 24260 24595 . + . ID=gene-LFV90_00715;Name=rpsP;gbkey=Gene;gene=rpsP;gene_biotype=protein_coding;locus_tag=LFV90_00715 DYDR01000003.1 Protein Homology CDS 24260 24595 . + 0 ID=cds-HJD60703.1;Parent=gene-LFV90_00715;Dbxref=NCBI_GP:HJD60703.1;Name=HJD60703.1;gbkey=CDS;gene=rpsP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004997078.1;locus_tag=LFV90_00715;product=30S ribosomal protein S16;protein_id=HJD60703.1;transl_table=11 DYDR01000003.1 tpg gene 24907 24981 . + . ID=gene-LFV90_00720;Name=LFV90_00720;gbkey=Gene;gene_biotype=tRNA;locus_tag=LFV90_00720 DYDR01000003.1 tRNAscan-SE tRNA 24907 24981 . + . ID=rna-LFV90_00720;Parent=gene-LFV90_00720;anticodon=(pos:24939..24941);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=LFV90_00720;product=tRNA-Thr DYDR01000003.1 tRNAscan-SE exon 24907 24981 . + . ID=exon-LFV90_00720-1;Parent=rna-LFV90_00720;anticodon=(pos:24939..24941);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=LFV90_00720;product=tRNA-Thr DYDR01000003.1 tpg gene 25177 25356 . - . ID=gene-LFV90_00725;Name=LFV90_00725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_00725 DYDR01000003.1 GeneMarkS-2+ CDS 25177 25356 . - 0 ID=cds-HJD60704.1;Parent=gene-LFV90_00725;Dbxref=NCBI_GP:HJD60704.1;Name=HJD60704.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_00725;product=hypothetical protein;protein_id=HJD60704.1;transl_table=11 DYDR01000003.1 tpg gene 25403 25479 . + . ID=gene-LFV90_00730;Name=LFV90_00730;gbkey=Gene;gene_biotype=tRNA;locus_tag=LFV90_00730 DYDR01000003.1 tRNAscan-SE tRNA 25403 25479 . + . ID=rna-LFV90_00730;Parent=gene-LFV90_00730;anticodon=(pos:25437..25439);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=LFV90_00730;product=tRNA-Arg DYDR01000003.1 tRNAscan-SE exon 25403 25479 . + . ID=exon-LFV90_00730-1;Parent=rna-LFV90_00730;anticodon=(pos:25437..25439);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=LFV90_00730;product=tRNA-Arg DYDR01000003.1 tpg pseudogene 25608 26285 . + . ID=gene-LFV90_00735;Name=LFV90_00735;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LFV90_00735;pseudo=true DYDR01000003.1 Protein Homology CDS 25608 26285 . + 0 ID=cds-LFV90_00735;Parent=gene-LFV90_00735;Note=internal stop;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025217.2;locus_tag=LFV90_00735;product=class I SAM-dependent methyltransferase;pseudo=true;transl_table=11 DYDR01000003.1 tpg gene 26391 26558 . - . ID=gene-LFV90_00740;Name=LFV90_00740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_00740 DYDR01000003.1 Protein Homology CDS 26391 26558 . - 0 ID=cds-HJD60705.1;Parent=gene-LFV90_00740;Dbxref=NCBI_GP:HJD60705.1;Name=HJD60705.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024252.2;locus_tag=LFV90_00740;product=helix-turn-helix transcriptional regulator;protein_id=HJD60705.1;transl_table=11 DYDR01000003.1 tpg gene 26704 26922 . - . ID=gene-LFV90_00745;Name=LFV90_00745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_00745 DYDR01000003.1 GeneMarkS-2+ CDS 26704 26922 . - 0 ID=cds-HJD60706.1;Parent=gene-LFV90_00745;Dbxref=NCBI_GP:HJD60706.1;Name=HJD60706.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_00745;product=hypothetical protein;protein_id=HJD60706.1;transl_table=11 DYDR01000003.1 tpg gene 27643 27813 . - . ID=gene-LFV90_00750;Name=LFV90_00750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_00750 DYDR01000003.1 GeneMarkS-2+ CDS 27643 27813 . - 0 ID=cds-HJD60707.1;Parent=gene-LFV90_00750;Dbxref=NCBI_GP:HJD60707.1;Name=HJD60707.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_00750;product=hypothetical protein;protein_id=HJD60707.1;transl_table=11 DYDR01000003.1 tpg gene 27810 27974 . - . ID=gene-LFV90_00755;Name=LFV90_00755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_00755 DYDR01000003.1 GeneMarkS-2+ CDS 27810 27974 . - 0 ID=cds-HJD60708.1;Parent=gene-LFV90_00755;Dbxref=NCBI_GP:HJD60708.1;Name=HJD60708.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_00755;product=hypothetical protein;protein_id=HJD60708.1;transl_table=11 DYDR01000003.1 tpg gene 28045 28275 . - . ID=gene-LFV90_00760;Name=LFV90_00760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_00760 DYDR01000003.1 GeneMarkS-2+ CDS 28045 28275 . - 0 ID=cds-HJD60709.1;Parent=gene-LFV90_00760;Dbxref=NCBI_GP:HJD60709.1;Name=HJD60709.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_00760;product=hypothetical protein;protein_id=HJD60709.1;transl_table=11 DYDR01000003.1 tpg gene 28517 28840 . - . ID=gene-LFV90_00765;Name=LFV90_00765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_00765 DYDR01000003.1 Protein Homology CDS 28517 28840 . - 0 ID=cds-HJD60710.1;Parent=gene-LFV90_00765;Dbxref=NCBI_GP:HJD60710.1;Name=HJD60710.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024206.2;locus_tag=LFV90_00765;product=ankyrin repeat domain-containing protein;protein_id=HJD60710.1;transl_table=11 DYDR01000003.1 tpg gene 29019 31595 . - . ID=gene-LFV90_00770;Name=clpB;gbkey=Gene;gene=clpB;gene_biotype=protein_coding;locus_tag=LFV90_00770 DYDR01000003.1 Protein Homology CDS 29019 31595 . - 0 ID=cds-HJD60711.1;Parent=gene-LFV90_00770;Dbxref=NCBI_GP:HJD60711.1;Name=HJD60711.1;gbkey=CDS;gene=clpB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011478022.1;locus_tag=LFV90_00770;product=ATP-dependent chaperone ClpB;protein_id=HJD60711.1;transl_table=11 DYDR01000003.1 tpg gene 31974 34067 . + . ID=gene-LFV90_00775;Name=LFV90_00775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_00775 DYDR01000003.1 Protein Homology CDS 31974 34067 . + 0 ID=cds-HJD60712.1;Parent=gene-LFV90_00775;Dbxref=NCBI_GP:HJD60712.1;Name=HJD60712.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011478021.1;locus_tag=LFV90_00775;product=hypothetical protein;protein_id=HJD60712.1;transl_table=11 DYDR01000003.1 tpg pseudogene 34070 34795 . + . ID=gene-LFV90_00780;Name=LFV90_00780;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LFV90_00780;pseudo=true DYDR01000003.1 Protein Homology CDS 34070 34795 . + 0 ID=cds-LFV90_00780;Parent=gene-LFV90_00780;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011190568.1;locus_tag=LFV90_00780;product=SDR family oxidoreductase;pseudo=true;transl_table=11 DYDR01000003.1 tpg gene 34816 35811 . + . ID=gene-LFV90_00785;Name=LFV90_00785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_00785 DYDR01000003.1 GeneMarkS-2+ CDS 34816 35811 . + 0 ID=cds-HJD60713.1;Parent=gene-LFV90_00785;Dbxref=NCBI_GP:HJD60713.1;Name=HJD60713.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_00785;product=hypothetical protein;protein_id=HJD60713.1;transl_table=11 DYDR01000003.1 tpg gene 35808 36017 . + . ID=gene-LFV90_00790;Name=LFV90_00790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_00790 DYDR01000003.1 GeneMarkS-2+ CDS 35808 36017 . + 0 ID=cds-HJD60714.1;Parent=gene-LFV90_00790;Dbxref=NCBI_GP:HJD60714.1;Name=HJD60714.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_00790;product=hypothetical protein;protein_id=HJD60714.1;transl_table=11 DYDR01000003.1 tpg gene 36147 36923 . + . ID=gene-LFV90_00795;Name=LFV90_00795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_00795 DYDR01000003.1 GeneMarkS-2+ CDS 36147 36923 . + 0 ID=cds-HJD60715.1;Parent=gene-LFV90_00795;Dbxref=NCBI_GP:HJD60715.1;Name=HJD60715.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_00795;product=hypothetical protein;protein_id=HJD60715.1;transl_table=11 DYDR01000003.1 tpg gene 36926 38248 . + . ID=gene-LFV90_00800;Name=LFV90_00800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_00800 DYDR01000003.1 Protein Homology CDS 36926 38248 . + 0 ID=cds-HJD60716.1;Parent=gene-LFV90_00800;Dbxref=NCBI_GP:HJD60716.1;Name=HJD60716.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010976735.1;locus_tag=LFV90_00800;product=DUF2748 family protein;protein_id=HJD60716.1;transl_table=11 DYDR01000003.1 tpg gene 38546 38746 . + . ID=gene-LFV90_00805;Name=LFV90_00805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_00805 DYDR01000003.1 GeneMarkS-2+ CDS 38546 38746 . + 0 ID=cds-HJD60717.1;Parent=gene-LFV90_00805;Dbxref=NCBI_GP:HJD60717.1;Name=HJD60717.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_00805;product=transposase;protein_id=HJD60717.1;transl_table=11 DYDR01000003.1 tpg gene 38760 42278 . - . ID=gene-LFV90_00810;Name=dnaE;gbkey=Gene;gene=dnaE;gene_biotype=protein_coding;locus_tag=LFV90_00810 DYDR01000003.1 Protein Homology CDS 38760 42278 . - 0 ID=cds-HJD60718.1;Parent=gene-LFV90_00810;Dbxref=NCBI_GP:HJD60718.1;Name=HJD60718.1;gbkey=CDS;gene=dnaE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012152276.1;locus_tag=LFV90_00810;product=DNA polymerase III subunit alpha;protein_id=HJD60718.1;transl_table=11 DYDR01000003.1 tpg gene 42476 43786 . - . ID=gene-LFV90_00815;Name=LFV90_00815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_00815 DYDR01000003.1 Protein Homology CDS 42476 43786 . - 0 ID=cds-HJD60719.1;Parent=gene-LFV90_00815;Dbxref=NCBI_GP:HJD60719.1;Name=HJD60719.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011476771.1;locus_tag=LFV90_00815;product=UDP-glucose/GDP-mannose dehydrogenase family protein;protein_id=HJD60719.1;transl_table=11 DYDR01000003.1 tpg gene 43881 46415 . + . ID=gene-LFV90_00820;Name=LFV90_00820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_00820 DYDR01000003.1 Protein Homology CDS 43881 46415 . + 0 ID=cds-HJD60720.1;Parent=gene-LFV90_00820;Dbxref=NCBI_GP:HJD60720.1;Name=HJD60720.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004599649.1;locus_tag=LFV90_00820;product=AsmA-like C-terminal region-containing protein;protein_id=HJD60720.1;transl_table=11 DYDR01000003.1 tpg gene 46417 47676 . + . ID=gene-LFV90_00825;Name=LFV90_00825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_00825 DYDR01000003.1 Protein Homology CDS 46417 47676 . + 0 ID=cds-HJD60721.1;Parent=gene-LFV90_00825;Dbxref=NCBI_GP:HJD60721.1;Name=HJD60721.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011271547.1;locus_tag=LFV90_00825;product=AmpG family muropeptide MFS transporter;protein_id=HJD60721.1;transl_table=11 DYDR01000003.1 tpg gene 47823 48077 . - . ID=gene-LFV90_00830;Name=LFV90_00830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_00830 DYDR01000003.1 GeneMarkS-2+ CDS 47823 48077 . - 0 ID=cds-HJD60722.1;Parent=gene-LFV90_00830;Dbxref=NCBI_GP:HJD60722.1;Name=HJD60722.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_00830;product=hypothetical protein;protein_id=HJD60722.1;transl_table=11 DYDR01000003.1 tpg gene 48090 48230 . - . ID=gene-LFV90_00835;Name=LFV90_00835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_00835 DYDR01000003.1 GeneMarkS-2+ CDS 48090 48230 . - 0 ID=cds-HJD60723.1;Parent=gene-LFV90_00835;Dbxref=NCBI_GP:HJD60723.1;Name=HJD60723.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_00835;product=hypothetical protein;protein_id=HJD60723.1;transl_table=11 DYDR01000003.1 tpg gene 48289 48456 . - . ID=gene-LFV90_00840;Name=LFV90_00840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_00840 DYDR01000003.1 GeneMarkS-2+ CDS 48289 48456 . - 0 ID=cds-HJD60724.1;Parent=gene-LFV90_00840;Dbxref=NCBI_GP:HJD60724.1;Name=HJD60724.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_00840;product=hypothetical protein;protein_id=HJD60724.1;transl_table=11 DYDR01000003.1 tpg gene 48490 48669 . - . ID=gene-LFV90_00845;Name=LFV90_00845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_00845 DYDR01000003.1 GeneMarkS-2+ CDS 48490 48669 . - 0 ID=cds-HJD60725.1;Parent=gene-LFV90_00845;Dbxref=NCBI_GP:HJD60725.1;Name=HJD60725.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_00845;product=hypothetical protein;protein_id=HJD60725.1;transl_table=11 DYDR01000003.1 tpg gene 48866 49612 . + . ID=gene-LFV90_00850;Name=tatC;gbkey=Gene;gene=tatC;gene_biotype=protein_coding;locus_tag=LFV90_00850 DYDR01000003.1 Protein Homology CDS 48866 49612 . + 0 ID=cds-HJD60726.1;Parent=gene-LFV90_00850;Dbxref=NCBI_GP:HJD60726.1;Name=HJD60726.1;gbkey=CDS;gene=tatC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012152272.1;locus_tag=LFV90_00850;product=twin-arginine translocase subunit TatC;protein_id=HJD60726.1;transl_table=11 DYDR01000003.1 tpg gene 49599 50882 . + . ID=gene-LFV90_00855;Name=serS;gbkey=Gene;gene=serS;gene_biotype=protein_coding;locus_tag=LFV90_00855 DYDR01000003.1 Protein Homology CDS 49599 50882 . + 0 ID=cds-HJD60727.1;Parent=gene-LFV90_00855;Dbxref=NCBI_GP:HJD60727.1;Name=HJD60727.1;gbkey=CDS;gene=serS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011271549.1;locus_tag=LFV90_00855;product=serine--tRNA ligase;protein_id=HJD60727.1;transl_table=11 DYDR01000003.1 tpg gene 51184 53616 . + . ID=gene-LFV90_00860;Name=LFV90_00860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_00860 DYDR01000003.1 Protein Homology CDS 51184 53616 . + 0 ID=cds-HJD60728.1;Parent=gene-LFV90_00860;Dbxref=NCBI_GP:HJD60728.1;Name=HJD60728.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011271550.1;locus_tag=LFV90_00860;product=VirB4 family type IV secretion/conjugal transfer ATPase;protein_id=HJD60728.1;transl_table=11 DYDR01000003.1 tpg gene 53771 57241 . + . ID=gene-LFV90_00865;Name=LFV90_00865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_00865 DYDR01000003.1 Protein Homology CDS 53771 57241 . + 0 ID=cds-HJD60729.1;Parent=gene-LFV90_00865;Dbxref=NCBI_GP:HJD60729.1;Name=HJD60729.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014409628.1;locus_tag=LFV90_00865;product=hypothetical protein;protein_id=HJD60729.1;transl_table=11 DYDR01000003.1 tpg gene 57245 58153 . + . ID=gene-LFV90_00870;Name=LFV90_00870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_00870 DYDR01000003.1 Protein Homology CDS 57245 58153 . + 0 ID=cds-HJD60730.1;Parent=gene-LFV90_00870;Dbxref=NCBI_GP:HJD60730.1;Name=HJD60730.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011191205.1;locus_tag=LFV90_00870;product=TerC/Alx family metal homeostasis membrane protein;protein_id=HJD60730.1;transl_table=11 DYDR01000003.1 tpg gene 58198 58929 . + . ID=gene-LFV90_00875;Name=LFV90_00875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_00875 DYDR01000003.1 Protein Homology CDS 58198 58929 . + 0 ID=cds-HJD60731.1;Parent=gene-LFV90_00875;Dbxref=NCBI_GP:HJD60731.1;Name=HJD60731.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017442657.1;locus_tag=LFV90_00875;product=outer membrane beta-barrel protein;protein_id=HJD60731.1;transl_table=11 DYDR01000003.1 tpg gene 59083 60744 . + . ID=gene-LFV90_00880;Name=LFV90_00880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_00880 DYDR01000003.1 Protein Homology CDS 59083 60744 . + 0 ID=cds-HJD60732.1;Parent=gene-LFV90_00880;Dbxref=NCBI_GP:HJD60732.1;Name=HJD60732.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010886371.1;locus_tag=LFV90_00880;product=class I SAM-dependent methyltransferase;protein_id=HJD60732.1;transl_table=11 DYDR01000003.1 tpg gene 60975 61592 . + . ID=gene-LFV90_00885;Name=LFV90_00885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_00885 DYDR01000003.1 Protein Homology CDS 60975 61592 . + 0 ID=cds-HJD60733.1;Parent=gene-LFV90_00885;Dbxref=NCBI_GP:HJD60733.1;Name=HJD60733.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011476781.1;locus_tag=LFV90_00885;product=NADH-quinone oxidoreductase subunit J;protein_id=HJD60733.1;transl_table=11 DYDR01000003.1 tpg gene 61585 61899 . + . ID=gene-LFV90_00890;Name=nuoK;gbkey=Gene;gene=nuoK;gene_biotype=protein_coding;locus_tag=LFV90_00890 DYDR01000003.1 Protein Homology CDS 61585 61899 . + 0 ID=cds-HJD60734.1;Parent=gene-LFV90_00890;Dbxref=NCBI_GP:HJD60734.1;Name=HJD60734.1;gbkey=CDS;gene=nuoK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012151334.1;locus_tag=LFV90_00890;product=NADH-quinone oxidoreductase subunit NuoK;protein_id=HJD60734.1;transl_table=11 DYDR01000003.1 tpg gene 61902 63824 . + . ID=gene-LFV90_00895;Name=nuoL;gbkey=Gene;gene=nuoL;gene_biotype=protein_coding;locus_tag=LFV90_00895 DYDR01000003.1 Protein Homology CDS 61902 63824 . + 0 ID=cds-HJD60735.1;Parent=gene-LFV90_00895;Dbxref=NCBI_GP:HJD60735.1;Name=HJD60735.1;gbkey=CDS;gene=nuoL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014364223.1;locus_tag=LFV90_00895;product=NADH-quinone oxidoreductase subunit L;protein_id=HJD60735.1;transl_table=11 DYDR01000003.1 tpg gene 64056 65540 . + . ID=gene-LFV90_00900;Name=LFV90_00900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_00900 DYDR01000003.1 Protein Homology CDS 64056 65540 . + 0 ID=cds-HJD60736.1;Parent=gene-LFV90_00900;Dbxref=NCBI_GP:HJD60736.1;Name=HJD60736.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011476784.1;locus_tag=LFV90_00900;product=NADH-quinone oxidoreductase subunit M;protein_id=HJD60736.1;transl_table=11 DYDR01000003.1 tpg gene 65598 65840 . + . ID=gene-LFV90_00905;Name=LFV90_00905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_00905 DYDR01000003.1 Protein Homology CDS 65598 65840 . + 0 ID=cds-HJD60737.1;Parent=gene-LFV90_00905;Dbxref=NCBI_GP:HJD60737.1;Name=HJD60737.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012152263.1;locus_tag=LFV90_00905;product=hypothetical protein;protein_id=HJD60737.1;transl_table=11 DYDR01000003.1 tpg gene 65837 66022 . + . ID=gene-LFV90_00910;Name=LFV90_00910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_00910 DYDR01000003.1 GeneMarkS-2+ CDS 65837 66022 . + 0 ID=cds-HJD60738.1;Parent=gene-LFV90_00910;Dbxref=NCBI_GP:HJD60738.1;Name=HJD60738.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_00910;product=hypothetical protein;protein_id=HJD60738.1;transl_table=11 DYDR01000003.1 tpg gene 66024 66614 . + . ID=gene-LFV90_00915;Name=ccmA;gbkey=Gene;gene=ccmA;gene_biotype=protein_coding;locus_tag=LFV90_00915 DYDR01000003.1 Protein Homology CDS 66024 66614 . + 0 ID=cds-HJD60739.1;Parent=gene-LFV90_00915;Dbxref=NCBI_GP:HJD60739.1;Name=HJD60739.1;gbkey=CDS;gene=ccmA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012152261.1;locus_tag=LFV90_00915;product=heme ABC exporter ATP-binding protein CcmA;protein_id=HJD60739.1;transl_table=11 DYDR01000003.1 tpg pseudogene 66678 67100 . + . ID=gene-LFV90_00920;Name=LFV90_00920;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LFV90_00920;pseudo=true DYDR01000003.1 Protein Homology CDS 66678 67100 . + 0 ID=cds-LFV90_00920;Parent=gene-LFV90_00920;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012151348.1;locus_tag=LFV90_00920;product=DNA starvation/stationary phase protection protein;pseudo=true;transl_table=11 DYDR01000003.1 tpg gene 67160 68539 . + . ID=gene-LFV90_00925;Name=lpdA;gbkey=Gene;gene=lpdA;gene_biotype=protein_coding;locus_tag=LFV90_00925 DYDR01000003.1 Protein Homology CDS 67160 68539 . + 0 ID=cds-HJD60740.1;Parent=gene-LFV90_00925;Dbxref=NCBI_GP:HJD60740.1;Name=HJD60740.1;gbkey=CDS;gene=lpdA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017442678.1;locus_tag=LFV90_00925;product=dihydrolipoyl dehydrogenase;protein_id=HJD60740.1;transl_table=11 DYDR01000003.1 tpg gene 68549 69718 . + . ID=gene-LFV90_00930;Name=LFV90_00930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_00930 DYDR01000003.1 GeneMarkS-2+ CDS 68549 69718 . + 0 ID=cds-HJD60741.1;Parent=gene-LFV90_00930;Dbxref=NCBI_GP:HJD60741.1;Name=HJD60741.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_00930;product=hypothetical protein;protein_id=HJD60741.1;transl_table=11 DYDR01000003.1 tpg gene 69760 70281 . + . ID=gene-LFV90_00935;Name=LFV90_00935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_00935 DYDR01000003.1 GeneMarkS-2+ CDS 69760 70281 . + 0 ID=cds-HJD60742.1;Parent=gene-LFV90_00935;Dbxref=NCBI_GP:HJD60742.1;Name=HJD60742.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_00935;product=hypothetical protein;protein_id=HJD60742.1;transl_table=11 DYDR01000003.1 tpg gene 70285 70839 . + . ID=gene-LFV90_00940;Name=LFV90_00940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_00940 DYDR01000003.1 Protein Homology CDS 70285 70839 . + 0 ID=cds-HJD60743.1;Parent=gene-LFV90_00940;Dbxref=NCBI_GP:HJD60743.1;Name=HJD60743.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011271569.1;locus_tag=LFV90_00940;product=F0F1 ATP synthase subunit delta;protein_id=HJD60743.1;transl_table=11 DYDR01000003.1 tpg gene 70900 71019 . + . ID=gene-LFV90_00945;Name=LFV90_00945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_00945 DYDR01000003.1 Protein Homology CDS 70900 71019 . + 0 ID=cds-HJD60744.1;Parent=gene-LFV90_00945;Dbxref=NCBI_GP:HJD60744.1;Name=HJD60744.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR03777.1;locus_tag=LFV90_00945;product=palindromic element RPE4 domain-containing protein;protein_id=HJD60744.1;transl_table=11 DYDR01000003.1 tpg gene 71042 72580 . + . ID=gene-LFV90_00950;Name=atpA;gbkey=Gene;gene=atpA;gene_biotype=protein_coding;locus_tag=LFV90_00950 DYDR01000003.1 Protein Homology CDS 71042 72580 . + 0 ID=cds-HJD60745.1;Parent=gene-LFV90_00950;Dbxref=NCBI_GP:HJD60745.1;Name=HJD60745.1;gbkey=CDS;gene=atpA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012152258.1;locus_tag=LFV90_00950;product=F0F1 ATP synthase subunit alpha;protein_id=HJD60745.1;transl_table=11 DYDR01000003.1 tpg gene 72729 73601 . + . ID=gene-LFV90_00955;Name=LFV90_00955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_00955 DYDR01000003.1 Protein Homology CDS 72729 73601 . + 0 ID=cds-HJD60746.1;Parent=gene-LFV90_00955;Dbxref=NCBI_GP:HJD60746.1;Name=HJD60746.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004596901.1;locus_tag=LFV90_00955;product=F0F1 ATP synthase subunit gamma;protein_id=HJD60746.1;transl_table=11 DYDR01000003.1 tpg gene 73652 73723 . - . ID=gene-LFV90_00960;Name=LFV90_00960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_00960 DYDR01000003.1 Protein Homology CDS 73652 73723 . - 0 ID=cds-HJD60747.1;Parent=gene-LFV90_00960;Dbxref=NCBI_GP:HJD60747.1;Name=HJD60747.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR03776.1;locus_tag=LFV90_00960;product=palindromic element RPE5 domain-containing protein;protein_id=HJD60747.1;transl_table=11 DYDR01000003.1 tpg gene 73772 75193 . + . ID=gene-LFV90_00965;Name=atpD;gbkey=Gene;gene=atpD;gene_biotype=protein_coding;locus_tag=LFV90_00965 DYDR01000003.1 Protein Homology CDS 73772 75193 . + 0 ID=cds-HJD60748.1;Parent=gene-LFV90_00965;Dbxref=NCBI_GP:HJD60748.1;Name=HJD60748.1;gbkey=CDS;gene=atpD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011476792.1;locus_tag=LFV90_00965;product=F0F1 ATP synthase subunit beta;protein_id=HJD60748.1;transl_table=11 DYDR01000003.1 tpg gene 75303 75629 . + . ID=gene-LFV90_00970;Name=LFV90_00970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_00970 DYDR01000003.1 Protein Homology CDS 75303 75629 . + 0 ID=cds-HJD60749.1;Parent=gene-LFV90_00970;Dbxref=NCBI_GP:HJD60749.1;Name=HJD60749.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011476793.1;locus_tag=LFV90_00970;product=F0F1 ATP synthase subunit epsilon;protein_id=HJD60749.1;transl_table=11 DYDR01000003.1 tpg gene 75917 78562 . + . ID=gene-LFV90_00975;Name=acnA;gbkey=Gene;gene=acnA;gene_biotype=protein_coding;locus_tag=LFV90_00975 DYDR01000003.1 Protein Homology CDS 75917 78562 . + 0 ID=cds-HJD60750.1;Parent=gene-LFV90_00975;Dbxref=NCBI_GP:HJD60750.1;Name=HJD60750.1;gbkey=CDS;gene=acnA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012149130.1;locus_tag=LFV90_00975;product=aconitate hydratase AcnA;protein_id=HJD60750.1;transl_table=11 DYDR01000003.1 tpg gene 78564 79145 . + . ID=gene-LFV90_00980;Name=LFV90_00980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_00980 DYDR01000003.1 Protein Homology CDS 78564 79145 . + 0 ID=cds-HJD60751.1;Parent=gene-LFV90_00980;Dbxref=NCBI_GP:HJD60751.1;Name=HJD60751.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024194.2;locus_tag=LFV90_00980;product=Rpn family recombination-promoting nuclease/putative transposase;protein_id=HJD60751.1;transl_table=11 DYDR01000003.1 tpg gene 79152 79403 . + . ID=gene-LFV90_00985;Name=LFV90_00985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_00985 DYDR01000003.1 Protein Homology CDS 79152 79403 . + 0 ID=cds-HJD60752.1;Parent=gene-LFV90_00985;Dbxref=NCBI_GP:HJD60752.1;Name=HJD60752.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014363254.1;locus_tag=LFV90_00985;product=hypothetical protein;protein_id=HJD60752.1;transl_table=11 DYDR01000003.1 tpg gene 79415 79771 . + . ID=gene-LFV90_00990;Name=LFV90_00990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_00990 DYDR01000003.1 Protein Homology CDS 79415 79771 . + 0 ID=cds-HJD60753.1;Parent=gene-LFV90_00990;Dbxref=NCBI_GP:HJD60753.1;Name=HJD60753.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012150093.1;locus_tag=LFV90_00990;product=DUF4870 family protein;protein_id=HJD60753.1;transl_table=11 DYDR01000003.1 tpg gene 79912 81933 . + . ID=gene-LFV90_00995;Name=nuoG;gbkey=Gene;gene=nuoG;gene_biotype=protein_coding;locus_tag=LFV90_00995 DYDR01000003.1 Protein Homology CDS 79912 81933 . + 0 ID=cds-HJD60754.1;Parent=gene-LFV90_00995;Dbxref=NCBI_GP:HJD60754.1;Name=HJD60754.1;gbkey=CDS;gene=nuoG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011271562.1;locus_tag=LFV90_00995;product=NADH-quinone oxidoreductase subunit NuoG;protein_id=HJD60754.1;transl_table=11 DYDR01000003.1 tpg pseudogene 82061 82326 . + . ID=gene-LFV90_01000;Name=LFV90_01000;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LFV90_01000;pseudo=true DYDR01000003.1 Protein Homology CDS 82061 82326 . + 0 ID=cds-LFV90_01000;Parent=gene-LFV90_01000;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007549156.1;locus_tag=LFV90_01000;product=GIY-YIG nuclease family protein;pseudo=true;transl_table=11 DYDR01000003.1 tpg gene 82469 83488 . + . ID=gene-LFV90_01005;Name=nuoH;gbkey=Gene;gene=nuoH;gene_biotype=protein_coding;locus_tag=LFV90_01005 DYDR01000003.1 Protein Homology CDS 82469 83488 . + 0 ID=cds-HJD60755.1;Parent=gene-LFV90_01005;Dbxref=NCBI_GP:HJD60755.1;Name=HJD60755.1;gbkey=CDS;gene=nuoH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011476798.1;locus_tag=LFV90_01005;product=NADH-quinone oxidoreductase subunit NuoH;protein_id=HJD60755.1;transl_table=11 DYDR01000003.1 tpg gene 83614 84093 . + . ID=gene-LFV90_01010;Name=nuoI;gbkey=Gene;gene=nuoI;gene_biotype=protein_coding;locus_tag=LFV90_01010 DYDR01000003.1 Protein Homology CDS 83614 84093 . + 0 ID=cds-HJD60756.1;Parent=gene-LFV90_01010;Dbxref=NCBI_GP:HJD60756.1;Name=HJD60756.1;gbkey=CDS;gene=nuoI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010977794.1;locus_tag=LFV90_01010;product=NADH-quinone oxidoreductase subunit NuoI;protein_id=HJD60756.1;transl_table=11 DYDR01000003.1 tpg gene 84317 84562 . + . ID=gene-LFV90_01015;Name=LFV90_01015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_01015 DYDR01000003.1 GeneMarkS-2+ CDS 84317 84562 . + 0 ID=cds-HJD60757.1;Parent=gene-LFV90_01015;Dbxref=NCBI_GP:HJD60757.1;Name=HJD60757.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_01015;product=hypothetical protein;protein_id=HJD60757.1;transl_table=11 DYDR01000003.1 tpg gene 84745 85740 . - . ID=gene-LFV90_01020;Name=LFV90_01020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_01020 DYDR01000003.1 Protein Homology CDS 84745 85740 . - 0 ID=cds-HJD60758.1;Parent=gene-LFV90_01020;Dbxref=NCBI_GP:HJD60758.1;Name=HJD60758.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025019.2;locus_tag=LFV90_01020;product=ATP-binding protein;protein_id=HJD60758.1;transl_table=11 DYDR01000003.1 tpg gene 86137 86757 . - . ID=gene-LFV90_01025;Name=LFV90_01025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_01025 DYDR01000003.1 Protein Homology CDS 86137 86757 . - 0 ID=cds-HJD60759.1;Parent=gene-LFV90_01025;Dbxref=NCBI_GP:HJD60759.1;Name=HJD60759.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013100.2;locus_tag=LFV90_01025;product=class D beta-lactamase;protein_id=HJD60759.1;transl_table=11 DYDR01000003.1 tpg gene 86943 89318 . - . ID=gene-LFV90_01030;Name=LFV90_01030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_01030 DYDR01000003.1 Protein Homology CDS 86943 89318 . - 0 ID=cds-HJD60760.1;Parent=gene-LFV90_01030;Dbxref=NCBI_GP:HJD60760.1;Name=HJD60760.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011476804.1;locus_tag=LFV90_01030;product=penicillin-binding protein 1A;protein_id=HJD60760.1;transl_table=11 DYDR01000003.1 tpg gene 89473 89988 . - . ID=gene-LFV90_01035;Name=LFV90_01035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_01035 DYDR01000003.1 GeneMarkS-2+ CDS 89473 89988 . - 0 ID=cds-HJD60761.1;Parent=gene-LFV90_01035;Dbxref=NCBI_GP:HJD60761.1;Name=HJD60761.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_01035;product=hypothetical protein;protein_id=HJD60761.1;transl_table=11 DYDR01000003.1 tpg gene 90319 90834 . - . ID=gene-LFV90_01040;Name=LFV90_01040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_01040 DYDR01000003.1 GeneMarkS-2+ CDS 90319 90834 . - 0 ID=cds-HJD60762.1;Parent=gene-LFV90_01040;Dbxref=NCBI_GP:HJD60762.1;Name=HJD60762.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_01040;product=hypothetical protein;protein_id=HJD60762.1;transl_table=11 DYDR01000003.1 tpg gene 91008 91463 . - . ID=gene-LFV90_01045;Name=LFV90_01045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_01045 DYDR01000003.1 GeneMarkS-2+ CDS 91008 91463 . - 0 ID=cds-HJD60763.1;Parent=gene-LFV90_01045;Dbxref=NCBI_GP:HJD60763.1;Name=HJD60763.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_01045;product=hypothetical protein;protein_id=HJD60763.1;transl_table=11 DYDR01000003.1 tpg gene 91817 93157 . - . ID=gene-LFV90_01050;Name=miaB;gbkey=Gene;gene=miaB;gene_biotype=protein_coding;locus_tag=LFV90_01050 DYDR01000003.1 Protein Homology CDS 91817 93157 . - 0 ID=cds-HJD60764.1;Parent=gene-LFV90_01050;Dbxref=NCBI_GP:HJD60764.1;Name=HJD60764.1;gbkey=CDS;gene=miaB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012152246.1;locus_tag=LFV90_01050;product=tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB;protein_id=HJD60764.1;transl_table=11 DYDR01000003.1 tpg gene 93339 93572 . - . ID=gene-LFV90_01055;Name=LFV90_01055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_01055 DYDR01000003.1 GeneMarkS-2+ CDS 93339 93572 . - 0 ID=cds-HJD60765.1;Parent=gene-LFV90_01055;Dbxref=NCBI_GP:HJD60765.1;Name=HJD60765.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_01055;product=hypothetical protein;protein_id=HJD60765.1;transl_table=11 DYDR01000003.1 tpg gene 93623 94675 . - . ID=gene-LFV90_01060;Name=LFV90_01060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_01060 DYDR01000003.1 Protein Homology CDS 93623 94675 . - 0 ID=cds-HJD60766.1;Parent=gene-LFV90_01060;Dbxref=NCBI_GP:HJD60766.1;Name=HJD60766.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011476808.1;locus_tag=LFV90_01060;product=hypothetical protein;protein_id=HJD60766.1;transl_table=11 DYDR01000003.1 tpg gene 94764 96539 . - . ID=gene-LFV90_01065;Name=LFV90_01065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_01065 DYDR01000003.1 Protein Homology CDS 94764 96539 . - 0 ID=cds-HJD60767.1;Parent=gene-LFV90_01065;Dbxref=NCBI_GP:HJD60767.1;Name=HJD60767.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014365008.1;locus_tag=LFV90_01065;product=ABC-F family ATP-binding cassette domain-containing protein;protein_id=HJD60767.1;transl_table=11 DYDR01000003.1 tpg gene 96764 98044 . - . ID=gene-LFV90_01070;Name=fabF;gbkey=Gene;gene=fabF;gene_biotype=protein_coding;locus_tag=LFV90_01070 DYDR01000003.1 Protein Homology CDS 96764 98044 . - 0 ID=cds-HJD60768.1;Parent=gene-LFV90_01070;Dbxref=NCBI_GP:HJD60768.1;Name=HJD60768.1;gbkey=CDS;gene=fabF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012149092.1;locus_tag=LFV90_01070;product=beta-ketoacyl-ACP synthase II;protein_id=HJD60768.1;transl_table=11 DYDR01000003.1 tpg gene 98083 98343 . - . ID=gene-LFV90_01075;Name=acpP;gbkey=Gene;gene=acpP;gene_biotype=protein_coding;locus_tag=LFV90_01075 DYDR01000003.1 Protein Homology CDS 98083 98343 . - 0 ID=cds-HJD60769.1;Parent=gene-LFV90_01075;Dbxref=NCBI_GP:HJD60769.1;Name=HJD60769.1;gbkey=CDS;gene=acpP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008579292.1;locus_tag=LFV90_01075;product=acyl carrier protein;protein_id=HJD60769.1;transl_table=11 DYDR01000003.1 tpg gene 98462 99187 . - . ID=gene-LFV90_01080;Name=fabG;gbkey=Gene;gene=fabG;gene_biotype=protein_coding;locus_tag=LFV90_01080 DYDR01000003.1 Protein Homology CDS 98462 99187 . - 0 ID=cds-HJD60770.1;Parent=gene-LFV90_01080;Dbxref=NCBI_GP:HJD60770.1;Name=HJD60770.1;gbkey=CDS;gene=fabG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017442627.1;locus_tag=LFV90_01080;product=3-oxoacyl-ACP reductase FabG;protein_id=HJD60770.1;transl_table=11 DYDR01000003.1 tpg gene 99180 100211 . - . ID=gene-LFV90_01085;Name=recA;gbkey=Gene;gene=recA;gene_biotype=protein_coding;locus_tag=LFV90_01085 DYDR01000003.1 Protein Homology CDS 99180 100211 . - 0 ID=cds-HJD60771.1;Parent=gene-LFV90_01085;Dbxref=NCBI_GP:HJD60771.1;Name=HJD60771.1;gbkey=CDS;gene=recA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011271523.1;locus_tag=LFV90_01085;product=recombinase RecA;protein_id=HJD60771.1;transl_table=11 DYDR01000003.1 tpg gene 100368 101411 . + . ID=gene-LFV90_01090;Name=LFV90_01090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_01090 DYDR01000003.1 Protein Homology CDS 100368 101411 . + 0 ID=cds-HJD60772.1;Parent=gene-LFV90_01090;Dbxref=NCBI_GP:HJD60772.1;Name=HJD60772.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006379608.1;locus_tag=LFV90_01090;product=PDDEXK nuclease domain-containing protein;protein_id=HJD60772.1;transl_table=11 DYDR01000003.1 tpg gene 102099 102620 . - . ID=gene-LFV90_01095;Name=rplI;gbkey=Gene;gene=rplI;gene_biotype=protein_coding;locus_tag=LFV90_01095 DYDR01000003.1 Protein Homology CDS 102099 102620 . - 0 ID=cds-HJD60773.1;Parent=gene-LFV90_01095;Dbxref=NCBI_GP:HJD60773.1;Name=HJD60773.1;gbkey=CDS;gene=rplI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012719335.1;locus_tag=LFV90_01095;product=50S ribosomal protein L9;protein_id=HJD60773.1;transl_table=11 DYDR01000003.1 tpg gene 102636 102920 . - . ID=gene-LFV90_01100;Name=rpsR;gbkey=Gene;gene=rpsR;gene_biotype=protein_coding;locus_tag=LFV90_01100 DYDR01000003.1 Protein Homology CDS 102636 102920 . - 0 ID=cds-HJD60774.1;Parent=gene-LFV90_01100;Dbxref=NCBI_GP:HJD60774.1;Name=HJD60774.1;gbkey=CDS;gene=rpsR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011476817.1;locus_tag=LFV90_01100;product=30S ribosomal protein S18;protein_id=HJD60774.1;transl_table=11 DYDR01000003.1 tpg gene 102959 103321 . - . ID=gene-LFV90_01105;Name=rpsF;gbkey=Gene;gene=rpsF;gene_biotype=protein_coding;locus_tag=LFV90_01105 DYDR01000003.1 Protein Homology CDS 102959 103321 . - 0 ID=cds-HJD60775.1;Parent=gene-LFV90_01105;Dbxref=NCBI_GP:HJD60775.1;Name=HJD60775.1;gbkey=CDS;gene=rpsF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012152237.1;locus_tag=LFV90_01105;product=30S ribosomal protein S6;protein_id=HJD60775.1;transl_table=11 DYDR01000003.1 tpg gene 104007 104222 . + . ID=gene-LFV90_01110;Name=LFV90_01110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_01110 DYDR01000003.1 Protein Homology CDS 104007 104222 . + 0 ID=cds-HJD60776.1;Parent=gene-LFV90_01110;Dbxref=NCBI_GP:HJD60776.1;Name=HJD60776.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012698.2;locus_tag=LFV90_01110;product=winged helix-turn-helix domain-containing protein;protein_id=HJD60776.1;transl_table=11 DYDR01000003.1 tpg gene 104327 105520 . + . ID=gene-LFV90_01115;Name=LFV90_01115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_01115 DYDR01000003.1 Protein Homology CDS 104327 105520 . + 0 ID=cds-HJD60777.1;Parent=gene-LFV90_01115;Dbxref=NCBI_GP:HJD60777.1;Name=HJD60777.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014273121.1;locus_tag=LFV90_01115;product=fatty acid desaturase;protein_id=HJD60777.1;transl_table=11 DYDR01000003.1 tpg gene 105914 106189 . + . ID=gene-LFV90_01120;Name=LFV90_01120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_01120 DYDR01000003.1 GeneMarkS-2+ CDS 105914 106189 . + 0 ID=cds-HJD60778.1;Parent=gene-LFV90_01120;Dbxref=NCBI_GP:HJD60778.1;Name=HJD60778.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_01120;product=hypothetical protein;protein_id=HJD60778.1;transl_table=11 DYDR01000003.1 tpg gene 106524 106664 . + . ID=gene-LFV90_01125;Name=LFV90_01125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_01125 DYDR01000003.1 GeneMarkS-2+ CDS 106524 106664 . + 0 ID=cds-HJD60779.1;Parent=gene-LFV90_01125;Dbxref=NCBI_GP:HJD60779.1;Name=HJD60779.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_01125;product=hypothetical protein;protein_id=HJD60779.1;transl_table=11 DYDR01000003.1 tpg gene 107165 107329 . + . ID=gene-LFV90_01130;Name=LFV90_01130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_01130 DYDR01000003.1 GeneMarkS-2+ CDS 107165 107329 . + 0 ID=cds-HJD60780.1;Parent=gene-LFV90_01130;Dbxref=NCBI_GP:HJD60780.1;Name=HJD60780.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_01130;product=hypothetical protein;protein_id=HJD60780.1;transl_table=11 DYDR01000003.1 tpg gene 107571 108044 . - . ID=gene-LFV90_01135;Name=LFV90_01135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_01135 DYDR01000003.1 Protein Homology CDS 107571 108044 . - 0 ID=cds-HJD60781.1;Parent=gene-LFV90_01135;Dbxref=NCBI_GP:HJD60781.1;Name=HJD60781.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017442640.1;locus_tag=LFV90_01135;product=outer membrane protein assembly factor BamE;protein_id=HJD60781.1;transl_table=11 DYDR01000003.1 tpg gene 108133 108333 . + . ID=gene-LFV90_01140;Name=rpmF;gbkey=Gene;gene=rpmF;gene_biotype=protein_coding;locus_tag=LFV90_01140 DYDR01000003.1 Protein Homology CDS 108133 108333 . + 0 ID=cds-HJD60782.1;Parent=gene-LFV90_01140;Dbxref=NCBI_GP:HJD60782.1;Name=HJD60782.1;gbkey=CDS;gene=rpmF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017442639.1;locus_tag=LFV90_01140;product=50S ribosomal protein L32;protein_id=HJD60782.1;transl_table=11 DYDR01000003.1 tpg gene 108346 109299 . + . ID=gene-LFV90_01145;Name=LFV90_01145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_01145 DYDR01000003.1 Protein Homology CDS 108346 109299 . + 0 ID=cds-HJD60783.1;Parent=gene-LFV90_01145;Dbxref=NCBI_GP:HJD60783.1;Name=HJD60783.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011271536.1;locus_tag=LFV90_01145;product=ketoacyl-ACP synthase III;protein_id=HJD60783.1;transl_table=11 DYDR01000003.1 tpg gene 109361 109525 . + . ID=gene-LFV90_01150;Name=LFV90_01150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_01150 DYDR01000003.1 GeneMarkS-2+ CDS 109361 109525 . + 0 ID=cds-HJD60784.1;Parent=gene-LFV90_01150;Dbxref=NCBI_GP:HJD60784.1;Name=HJD60784.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_01150;product=hypothetical protein;protein_id=HJD60784.1;transl_table=11 DYDR01000003.1 tpg gene 109650 110117 . + . ID=gene-LFV90_01155;Name=pal;gbkey=Gene;gene=pal;gene_biotype=protein_coding;locus_tag=LFV90_01155 DYDR01000003.1 Protein Homology CDS 109650 110117 . + 0 ID=cds-HJD60785.1;Parent=gene-LFV90_01155;Dbxref=NCBI_GP:HJD60785.1;Name=HJD60785.1;gbkey=CDS;gene=pal;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017442637.1;locus_tag=LFV90_01155;product=peptidoglycan-associated lipoprotein Pal;protein_id=HJD60785.1;transl_table=11 DYDR01000003.1 tpg gene 110458 110534 . + . ID=gene-LFV90_01160;Name=LFV90_01160;gbkey=Gene;gene_biotype=tRNA;locus_tag=LFV90_01160 DYDR01000003.1 tRNAscan-SE tRNA 110458 110534 . + . ID=rna-LFV90_01160;Parent=gene-LFV90_01160;anticodon=(pos:110492..110494);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=LFV90_01160;product=tRNA-Ile DYDR01000003.1 tRNAscan-SE exon 110458 110534 . + . ID=exon-LFV90_01160-1;Parent=rna-LFV90_01160;anticodon=(pos:110492..110494);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=LFV90_01160;product=tRNA-Ile DYDR01000003.1 tpg gene 110683 111771 . + . ID=gene-LFV90_01165;Name=LFV90_01165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_01165 DYDR01000003.1 Protein Homology CDS 110683 111771 . + 0 ID=cds-HJD60786.1;Parent=gene-LFV90_01165;Dbxref=NCBI_GP:HJD60786.1;Name=HJD60786.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014409610.1;locus_tag=LFV90_01165;product=LptF/LptG family permease;protein_id=HJD60786.1;transl_table=11 DYDR01000003.1 tpg gene 111948 112988 . + . ID=gene-LFV90_01170;Name=LFV90_01170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_01170 DYDR01000003.1 Protein Homology CDS 111948 112988 . + 0 ID=cds-HJD60787.1;Parent=gene-LFV90_01170;Dbxref=NCBI_GP:HJD60787.1;Name=HJD60787.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017442635.1;locus_tag=LFV90_01170;product=rod shape-determining protein;protein_id=HJD60787.1;transl_table=11 DYDR01000003.1 tpg gene 112991 113833 . + . ID=gene-LFV90_01175;Name=mreC;gbkey=Gene;gene=mreC;gene_biotype=protein_coding;locus_tag=LFV90_01175 DYDR01000003.1 Protein Homology CDS 112991 113833 . + 0 ID=cds-HJD60788.1;Parent=gene-LFV90_01175;Dbxref=NCBI_GP:HJD60788.1;Name=HJD60788.1;gbkey=CDS;gene=mreC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017442634.1;locus_tag=LFV90_01175;product=rod shape-determining protein MreC;protein_id=HJD60788.1;transl_table=11 DYDR01000003.1 tpg gene 113916 114311 . + . ID=gene-LFV90_01180;Name=LFV90_01180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_01180 DYDR01000003.1 Protein Homology CDS 113916 114311 . + 0 ID=cds-HJD60789.1;Parent=gene-LFV90_01180;Dbxref=NCBI_GP:HJD60789.1;Name=HJD60789.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008579282.1;locus_tag=LFV90_01180;product=YraN family protein;protein_id=HJD60789.1;transl_table=11 DYDR01000003.1 tpg gene 114598 114837 . + . ID=gene-LFV90_01185;Name=LFV90_01185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_01185 DYDR01000003.1 Protein Homology CDS 114598 114837 . + 0 ID=cds-HJD60790.1;Parent=gene-LFV90_01185;Dbxref=NCBI_GP:HJD60790.1;Name=HJD60790.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011476829.1;locus_tag=LFV90_01185;product=helix-turn-helix transcriptional regulator;protein_id=HJD60790.1;transl_table=11 DYDR01000003.1 tpg gene 114843 115418 . + . ID=gene-LFV90_01190;Name=gmk;gbkey=Gene;gene=gmk;gene_biotype=protein_coding;locus_tag=LFV90_01190 DYDR01000003.1 Protein Homology CDS 114843 115418 . + 0 ID=cds-HJD60791.1;Parent=gene-LFV90_01190;Dbxref=NCBI_GP:HJD60791.1;Name=HJD60791.1;gbkey=CDS;gene=gmk;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012152229.1;locus_tag=LFV90_01190;product=guanylate kinase;protein_id=HJD60791.1;transl_table=11 DYDR01000003.1 tpg gene 115580 115918 . - . ID=gene-LFV90_01195;Name=LFV90_01195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_01195 DYDR01000003.1 Protein Homology CDS 115580 115918 . - 0 ID=cds-HJD60792.1;Parent=gene-LFV90_01195;Dbxref=NCBI_GP:HJD60792.1;Name=HJD60792.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010977695.1;locus_tag=LFV90_01195;product=AAA domain-containing protein;protein_id=HJD60792.1;transl_table=11 DYDR01000003.1 tpg gene 115943 116242 . - . ID=gene-LFV90_01200;Name=LFV90_01200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_01200 DYDR01000003.1 GeneMarkS-2+ CDS 115943 116242 . - 0 ID=cds-HJD60793.1;Parent=gene-LFV90_01200;Dbxref=NCBI_GP:HJD60793.1;Name=HJD60793.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_01200;product=hypothetical protein;protein_id=HJD60793.1;transl_table=11 DYDR01000003.1 tpg gene 116261 116641 . - . ID=gene-LFV90_01205;Name=LFV90_01205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_01205 DYDR01000003.1 GeneMarkS-2+ CDS 116261 116641 . - 0 ID=cds-HJD60794.1;Parent=gene-LFV90_01205;Dbxref=NCBI_GP:HJD60794.1;Name=HJD60794.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_01205;product=hypothetical protein;protein_id=HJD60794.1;transl_table=11 DYDR01000003.1 tpg gene 117124 117351 . - . ID=gene-LFV90_01210;Name=LFV90_01210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_01210 DYDR01000003.1 Protein Homology CDS 117124 117351 . - 0 ID=cds-HJD60795.1;Parent=gene-LFV90_01210;Dbxref=NCBI_GP:HJD60795.1;Name=HJD60795.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016926542.1;locus_tag=LFV90_01210;product=hypothetical protein;protein_id=HJD60795.1;transl_table=11 DYDR01000003.1 tpg gene 117400 118407 . - . ID=gene-LFV90_01215;Name=LFV90_01215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_01215 DYDR01000003.1 GeneMarkS-2+ CDS 117400 118407 . - 0 ID=cds-HJD60796.1;Parent=gene-LFV90_01215;Dbxref=NCBI_GP:HJD60796.1;Name=HJD60796.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_01215;product=DNA helicase;protein_id=HJD60796.1;transl_table=11 DYDR01000003.1 tpg gene 118319 118843 . - . ID=gene-LFV90_01220;Name=LFV90_01220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_01220 DYDR01000003.1 GeneMarkS-2+ CDS 118319 118843 . - 0 ID=cds-HJD60797.1;Parent=gene-LFV90_01220;Dbxref=NCBI_GP:HJD60797.1;Name=HJD60797.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_01220;product=hypothetical protein;protein_id=HJD60797.1;transl_table=11 DYDR01000003.1 tpg gene 119447 119620 . - . ID=gene-LFV90_01225;Name=LFV90_01225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_01225 DYDR01000003.1 GeneMarkS-2+ CDS 119447 119620 . - 0 ID=cds-HJD60798.1;Parent=gene-LFV90_01225;Dbxref=NCBI_GP:HJD60798.1;Name=HJD60798.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_01225;product=hypothetical protein;protein_id=HJD60798.1;transl_table=11 DYDR01000003.1 tpg gene 119641 120822 . - . ID=gene-LFV90_01230;Name=LFV90_01230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_01230 DYDR01000003.1 Protein Homology CDS 119641 120822 . - 0 ID=cds-HJD60799.1;Parent=gene-LFV90_01230;Dbxref=NCBI_GP:HJD60799.1;Name=HJD60799.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016917183.1;locus_tag=LFV90_01230;product=acetyl-CoA C-acetyltransferase;protein_id=HJD60799.1;transl_table=11 DYDR01000003.1 tpg pseudogene 120885 120965 . - . ID=gene-LFV90_01235;Name=LFV90_01235;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LFV90_01235;pseudo=true DYDR01000003.1 Protein Homology CDS 120885 120965 . - 0 ID=cds-LFV90_01235;Parent=gene-LFV90_01235;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR03777.1;locus_tag=LFV90_01235;product=palindromic element RPE4 domain-containing protein;pseudo=true;transl_table=11 DYDR01000003.1 tpg gene 121015 121254 . - . ID=gene-LFV90_01240;Name=LFV90_01240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_01240 DYDR01000003.1 Protein Homology CDS 121015 121254 . - 0 ID=cds-HJD60800.1;Parent=gene-LFV90_01240;Dbxref=NCBI_GP:HJD60800.1;Name=HJD60800.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012770.2;locus_tag=LFV90_01240;product=alpha/beta fold hydrolase;protein_id=HJD60800.1;transl_table=11 DYDR01000003.1 tpg gene 121346 121960 . - . ID=gene-LFV90_01245;Name=LFV90_01245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_01245 DYDR01000003.1 GeneMarkS-2+ CDS 121346 121960 . - 0 ID=cds-HJD60801.1;Parent=gene-LFV90_01245;Dbxref=NCBI_GP:HJD60801.1;Name=HJD60801.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_01245;product=alpha/beta hydrolase;protein_id=HJD60801.1;transl_table=11 DYDR01000003.1 tpg gene 122232 123734 . + . ID=gene-LFV90_01250;Name=tlc5;gbkey=Gene;gene=tlc5;gene_biotype=protein_coding;locus_tag=LFV90_01250 DYDR01000003.1 Protein Homology CDS 122232 123734 . + 0 ID=cds-HJD60802.1;Parent=gene-LFV90_01250;Dbxref=NCBI_GP:HJD60802.1;Name=HJD60802.1;gbkey=CDS;gene=tlc5;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011476837.1;locus_tag=LFV90_01250;product=GTP/GDP exchange transporter Tlc5;protein_id=HJD60802.1;transl_table=11 DYDR01000003.1 tpg gene 124235 124528 . + . ID=gene-LFV90_01255;Name=LFV90_01255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_01255 DYDR01000003.1 GeneMarkS-2+ CDS 124235 124528 . + 0 ID=cds-HJD60803.1;Parent=gene-LFV90_01255;Dbxref=NCBI_GP:HJD60803.1;Name=HJD60803.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_01255;product=hypothetical protein;protein_id=HJD60803.1;transl_table=11 DYDR01000003.1 tpg gene 124922 125530 . - . ID=gene-LFV90_01260;Name=LFV90_01260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_01260 DYDR01000003.1 Protein Homology CDS 124922 125530 . - 0 ID=cds-HJD60804.1;Parent=gene-LFV90_01260;Dbxref=NCBI_GP:HJD60804.1;Name=HJD60804.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011476839.1;locus_tag=LFV90_01260;product=Maf family nucleotide pyrophosphatase;protein_id=HJD60804.1;transl_table=11 DYDR01000003.1 tpg gene 125533 125754 . - . ID=gene-LFV90_01265;Name=infA;gbkey=Gene;gene=infA;gene_biotype=protein_coding;locus_tag=LFV90_01265 DYDR01000003.1 Protein Homology CDS 125533 125754 . - 0 ID=cds-HJD60805.1;Parent=gene-LFV90_01265;Dbxref=NCBI_GP:HJD60805.1;Name=HJD60805.1;gbkey=CDS;gene=infA;inference=COORDINATES: protein motif:HMM:TIGR00008.1;locus_tag=LFV90_01265;product=translation initiation factor IF-1;protein_id=HJD60805.1;transl_table=11 DYDR01000003.1 tpg gene 125772 125848 . - . ID=gene-LFV90_01270;Name=LFV90_01270;gbkey=Gene;gene_biotype=tRNA;locus_tag=LFV90_01270 DYDR01000003.1 tRNAscan-SE tRNA 125772 125848 . - . ID=rna-LFV90_01270;Parent=gene-LFV90_01270;anticodon=(pos:complement(125812..125814));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=LFV90_01270;product=tRNA-Pro DYDR01000003.1 tRNAscan-SE exon 125772 125848 . - . ID=exon-LFV90_01270-1;Parent=rna-LFV90_01270;anticodon=(pos:complement(125812..125814));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=LFV90_01270;product=tRNA-Pro DYDR01000003.1 tpg gene 126631 127152 . + . ID=gene-LFV90_01275;Name=LFV90_01275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_01275 DYDR01000003.1 GeneMarkS-2+ CDS 126631 127152 . + 0 ID=cds-HJD60806.1;Parent=gene-LFV90_01275;Dbxref=NCBI_GP:HJD60806.1;Name=HJD60806.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_01275;product=hypothetical protein;protein_id=HJD60806.1;transl_table=11 DYDR01000003.1 tpg gene 127159 127692 . + . ID=gene-LFV90_01280;Name=LFV90_01280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_01280 DYDR01000003.1 GeneMarkS-2+ CDS 127159 127692 . + 0 ID=cds-HJD60807.1;Parent=gene-LFV90_01280;Dbxref=NCBI_GP:HJD60807.1;Name=HJD60807.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_01280;product=hypothetical protein;protein_id=HJD60807.1;transl_table=11 DYDR01000003.1 tpg gene 127755 128813 . + . ID=gene-LFV90_01285;Name=LFV90_01285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_01285 DYDR01000003.1 GeneMarkS-2+ CDS 127755 128813 . + 0 ID=cds-HJD60808.1;Parent=gene-LFV90_01285;Dbxref=NCBI_GP:HJD60808.1;Name=HJD60808.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_01285;product=hypothetical protein;protein_id=HJD60808.1;transl_table=11 DYDR01000003.1 tpg gene 128911 129237 . - . ID=gene-LFV90_01290;Name=LFV90_01290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_01290 DYDR01000003.1 GeneMarkS-2+ CDS 128911 129237 . - 0 ID=cds-HJD60809.1;Parent=gene-LFV90_01290;Dbxref=NCBI_GP:HJD60809.1;Name=HJD60809.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_01290;product=hypothetical protein;protein_id=HJD60809.1;transl_table=11 DYDR01000003.1 tpg gene 129299 130243 . + . ID=gene-LFV90_01295;Name=LFV90_01295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_01295 DYDR01000003.1 GeneMarkS-2+ CDS 129299 130243 . + 0 ID=cds-HJD60810.1;Parent=gene-LFV90_01295;Dbxref=NCBI_GP:HJD60810.1;Name=HJD60810.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_01295;product=hypothetical protein;protein_id=HJD60810.1;transl_table=11 DYDR01000003.1 tpg gene 131129 131356 . + . ID=gene-LFV90_01300;Name=LFV90_01300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_01300 DYDR01000003.1 GeneMarkS-2+ CDS 131129 131356 . + 0 ID=cds-HJD60811.1;Parent=gene-LFV90_01300;Dbxref=NCBI_GP:HJD60811.1;Name=HJD60811.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_01300;product=hypothetical protein;protein_id=HJD60811.1;transl_table=11 DYDR01000003.1 tpg pseudogene 131423 131883 . + . ID=gene-LFV90_01305;Name=LFV90_01305;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LFV90_01305;pseudo=true DYDR01000003.1 Protein Homology CDS 131423 131883 . + 0 ID=cds-LFV90_01305;Parent=gene-LFV90_01305;Note=frameshifted;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015737.2;locus_tag=LFV90_01305;product=autotransporter outer membrane beta-barrel domain-containing protein;pseudo=true;transl_table=11 DYDR01000003.1 tpg gene 131895 132116 . + . ID=gene-LFV90_01310;Name=LFV90_01310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_01310 DYDR01000003.1 GeneMarkS-2+ CDS 131895 132116 . + 0 ID=cds-HJD60812.1;Parent=gene-LFV90_01310;Dbxref=NCBI_GP:HJD60812.1;Name=HJD60812.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_01310;product=hypothetical protein;protein_id=HJD60812.1;transl_table=11 DYDR01000003.1 tpg gene 132188 132745 . - . ID=gene-LFV90_01315;Name=LFV90_01315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_01315 DYDR01000003.1 Protein Homology CDS 132188 132745 . - 0 ID=cds-HJD60813.1;Parent=gene-LFV90_01315;Dbxref=NCBI_GP:HJD60813.1;Name=HJD60813.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011476846.1;locus_tag=LFV90_01315;product=ankyrin repeat domain-containing protein;protein_id=HJD60813.1;transl_table=11 DYDR01000003.1 tpg pseudogene 132794 133397 . - . ID=gene-LFV90_01320;Name=LFV90_01320;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LFV90_01320;pseudo=true DYDR01000003.1 Protein Homology CDS 132794 133397 . - 0 ID=cds-LFV90_01320;Parent=gene-LFV90_01320;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011476847.1;locus_tag=LFV90_01320;product=ankyrin repeat domain-containing protein;pseudo=true;transl_table=11 DYDR01000003.1 tpg gene 133691 133912 . + . ID=gene-LFV90_01325;Name=LFV90_01325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_01325 DYDR01000003.1 Protein Homology CDS 133691 133912 . + 0 ID=cds-HJD60814.1;Parent=gene-LFV90_01325;Dbxref=NCBI_GP:HJD60814.1;Name=HJD60814.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013089.2;locus_tag=LFV90_01325;product=multidrug efflux SMR transporter;protein_id=HJD60814.1;transl_table=11 DYDR01000003.1 tpg gene 134034 135899 . - . ID=gene-LFV90_01330;Name=LFV90_01330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_01330 DYDR01000003.1 Protein Homology CDS 134034 135899 . - 0 ID=cds-HJD60815.1;Parent=gene-LFV90_01330;Dbxref=NCBI_GP:HJD60815.1;Name=HJD60815.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011476849.1;locus_tag=LFV90_01330;product=sulfatase-like hydrolase/transferase;protein_id=HJD60815.1;transl_table=11 DYDR01000003.1 tpg gene 136177 138426 . - . ID=gene-LFV90_01335;Name=LFV90_01335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_01335 DYDR01000003.1 Protein Homology CDS 136177 138426 . - 0 ID=cds-HJD60816.1;Parent=gene-LFV90_01335;Dbxref=NCBI_GP:HJD60816.1;Name=HJD60816.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011476850.1;locus_tag=LFV90_01335;product=DNA translocase FtsK 4TM domain-containing protein;protein_id=HJD60816.1;transl_table=11 DYDR01000003.1 tpg gene 138574 138762 . - . ID=gene-LFV90_01340;Name=LFV90_01340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_01340 DYDR01000003.1 Protein Homology CDS 138574 138762 . - 0 ID=cds-HJD60817.1;Parent=gene-LFV90_01340;Dbxref=NCBI_GP:HJD60817.1;Name=HJD60817.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR03777.1;locus_tag=LFV90_01340;product=palindromic element RPE4 domain-containing protein;protein_id=HJD60817.1;transl_table=11 DYDR01000003.1 tpg gene 138798 139040 . + . ID=gene-LFV90_01345;Name=LFV90_01345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_01345 DYDR01000003.1 Protein Homology CDS 138798 139040 . + 0 ID=cds-HJD60818.1;Parent=gene-LFV90_01345;Dbxref=NCBI_GP:HJD60818.1;Name=HJD60818.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011271214.1;locus_tag=LFV90_01345;product=DUF2442 domain-containing protein;protein_id=HJD60818.1;transl_table=11 DYDR01000003.1 tpg gene 139106 139894 . + . ID=gene-LFV90_01350;Name=map;gbkey=Gene;gene=map;gene_biotype=protein_coding;locus_tag=LFV90_01350 DYDR01000003.1 Protein Homology CDS 139106 139894 . + 0 ID=cds-HJD60819.1;Parent=gene-LFV90_01350;Dbxref=NCBI_GP:HJD60819.1;Name=HJD60819.1;gbkey=CDS;gene=map;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012152215.1;locus_tag=LFV90_01350;product=type I methionyl aminopeptidase;protein_id=HJD60819.1;transl_table=11 DYDR01000003.1 tpg gene 139899 140273 . + . ID=gene-LFV90_01355;Name=LFV90_01355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_01355 DYDR01000003.1 Protein Homology CDS 139899 140273 . + 0 ID=cds-HJD60820.1;Parent=gene-LFV90_01355;Dbxref=NCBI_GP:HJD60820.1;Name=HJD60820.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014409673.1;locus_tag=LFV90_01355;product=DNA repair protein;protein_id=HJD60820.1;transl_table=11 DYDR01000003.1 tpg gene 140339 140629 . + . ID=gene-LFV90_01360;Name=LFV90_01360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_01360 DYDR01000003.1 Protein Homology CDS 140339 140629 . + 0 ID=cds-HJD60821.1;Parent=gene-LFV90_01360;Dbxref=NCBI_GP:HJD60821.1;Name=HJD60821.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015935.2;locus_tag=LFV90_01360;product=DNA repair protein RadC;protein_id=HJD60821.1;transl_table=11 DYDR01000003.1 tpg gene 140626 141627 . + . ID=gene-LFV90_01365;Name=LFV90_01365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_01365 DYDR01000003.1 Protein Homology CDS 140626 141627 . + 0 ID=cds-HJD60822.1;Parent=gene-LFV90_01365;Dbxref=NCBI_GP:HJD60822.1;Name=HJD60822.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017442717.1;locus_tag=LFV90_01365;product=glycosyltransferase family 4 protein;protein_id=HJD60822.1;transl_table=11 DYDR01000003.1 tpg gene 141624 141938 . + . ID=gene-LFV90_01370;Name=LFV90_01370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_01370 DYDR01000003.1 Protein Homology CDS 141624 141938 . + 0 ID=cds-HJD60823.1;Parent=gene-LFV90_01370;Dbxref=NCBI_GP:HJD60823.1;Name=HJD60823.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011476854.1;locus_tag=LFV90_01370;product=DUF721 domain-containing protein;protein_id=HJD60823.1;transl_table=11 DYDR01000003.1 tpg gene 142163 142990 . - . ID=gene-LFV90_01375;Name=LFV90_01375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_01375 DYDR01000003.1 Protein Homology CDS 142163 142990 . - 0 ID=cds-HJD60824.1;Parent=gene-LFV90_01375;Dbxref=NCBI_GP:HJD60824.1;Name=HJD60824.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014014872.1;locus_tag=LFV90_01375;product=alpha/beta hydrolase;protein_id=HJD60824.1;transl_table=11 DYDR01000003.1 tpg pseudogene 143027 143077 . - . ID=gene-LFV90_01380;Name=LFV90_01380;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LFV90_01380;pseudo=true DYDR01000003.1 Protein Homology CDS 143027 143077 . - 0 ID=cds-LFV90_01380;Parent=gene-LFV90_01380;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR03777.1;locus_tag=LFV90_01380;product=palindromic element RPE4 domain-containing protein;pseudo=true;transl_table=11 DYDR01000003.1 tpg gene 143194 143646 . - . ID=gene-LFV90_01385;Name=ssb;gbkey=Gene;gene=ssb;gene_biotype=protein_coding;locus_tag=LFV90_01385 DYDR01000003.1 Protein Homology CDS 143194 143646 . - 0 ID=cds-HJD60825.1;Parent=gene-LFV90_01385;Dbxref=NCBI_GP:HJD60825.1;Name=HJD60825.1;gbkey=CDS;gene=ssb;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011271625.1;locus_tag=LFV90_01385;product=single-stranded DNA-binding protein;protein_id=HJD60825.1;transl_table=11 DYDR01000003.1 tpg gene 143750 146611 . + . ID=gene-LFV90_01390;Name=uvrA;gbkey=Gene;gene=uvrA;gene_biotype=protein_coding;locus_tag=LFV90_01390 DYDR01000003.1 Protein Homology CDS 143750 146611 . + 0 ID=cds-HJD60826.1;Parent=gene-LFV90_01390;Dbxref=NCBI_GP:HJD60826.1;Name=HJD60826.1;gbkey=CDS;gene=uvrA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010420990.1;locus_tag=LFV90_01390;product=excinuclease ABC subunit UvrA;protein_id=HJD60826.1;transl_table=11 DYDR01000003.1 tpg gene 146678 147823 . - . ID=gene-LFV90_01395;Name=LFV90_01395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_01395 DYDR01000003.1 Protein Homology CDS 146678 147823 . - 0 ID=cds-HJD60827.1;Parent=gene-LFV90_01395;Dbxref=NCBI_GP:HJD60827.1;Name=HJD60827.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011476858.1;locus_tag=LFV90_01395;product=ATP-binding protein;protein_id=HJD60827.1;transl_table=11 DYDR01000003.1 tpg gene 147928 148728 . - . ID=gene-LFV90_01400;Name=LFV90_01400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_01400 DYDR01000003.1 Protein Homology CDS 147928 148728 . - 0 ID=cds-HJD60828.1;Parent=gene-LFV90_01400;Dbxref=NCBI_GP:HJD60828.1;Name=HJD60828.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016830586.1;locus_tag=LFV90_01400;product=metal ABC transporter substrate-binding protein;protein_id=HJD60828.1;transl_table=11 DYDR01000003.1 tpg gene 148831 150036 . - . ID=gene-LFV90_01405;Name=LFV90_01405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_01405 DYDR01000003.1 Protein Homology CDS 148831 150036 . - 0 ID=cds-HJD60829.1;Parent=gene-LFV90_01405;Dbxref=NCBI_GP:HJD60829.1;Name=HJD60829.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011476860.1;locus_tag=LFV90_01405;product=CCA tRNA nucleotidyltransferase;protein_id=HJD60829.1;transl_table=11 DYDR01000003.1 tpg gene 150020 150352 . - . ID=gene-LFV90_01410;Name=LFV90_01410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_01410 DYDR01000003.1 GeneMarkS-2+ CDS 150020 150352 . - 0 ID=cds-HJD60830.1;Parent=gene-LFV90_01410;Dbxref=NCBI_GP:HJD60830.1;Name=HJD60830.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_01410;product=hypothetical protein;protein_id=HJD60830.1;transl_table=11 DYDR01000003.1 tpg pseudogene 150587 151413 . - . ID=gene-LFV90_01415;Name=LFV90_01415;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LFV90_01415;pseudo=true DYDR01000003.1 Protein Homology CDS 150587 151413 . - 0 ID=cds-LFV90_01415;Parent=gene-LFV90_01415;Note=frameshifted;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015714.2;locus_tag=LFV90_01415;product=ComEC/Rec2 family competence protein;pseudo=true;transl_table=11 DYDR01000003.1 tpg gene 151545 151973 . - . ID=gene-LFV90_01420;Name=LFV90_01420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_01420 DYDR01000003.1 GeneMarkS-2+ CDS 151545 151973 . - 0 ID=cds-HJD60831.1;Parent=gene-LFV90_01420;Dbxref=NCBI_GP:HJD60831.1;Name=HJD60831.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_01420;product=hypothetical protein;protein_id=HJD60831.1;transl_table=11 DYDR01000003.1 tpg gene 152139 156428 . + . ID=gene-LFV90_01425;Name=LFV90_01425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_01425 DYDR01000003.1 Protein Homology CDS 152139 156428 . + 0 ID=cds-HJD60832.1;Parent=gene-LFV90_01425;Dbxref=NCBI_GP:HJD60832.1;Name=HJD60832.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014365146.1;locus_tag=LFV90_01425;product=autotransporter domain-containing protein;protein_id=HJD60832.1;transl_table=11 DYDR01000003.1 tpg gene 156567 156641 . + . ID=gene-LFV90_01430;Name=LFV90_01430;gbkey=Gene;gene_biotype=tRNA;locus_tag=LFV90_01430 DYDR01000003.1 tRNAscan-SE tRNA 156567 156641 . + . ID=rna-LFV90_01430;Parent=gene-LFV90_01430;anticodon=(pos:156600..156602);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=LFV90_01430;product=tRNA-Glu DYDR01000003.1 tRNAscan-SE exon 156567 156641 . + . ID=exon-LFV90_01430-1;Parent=rna-LFV90_01430;anticodon=(pos:156600..156602);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=LFV90_01430;product=tRNA-Glu DYDR01000003.1 tpg gene 156995 158554 . + . ID=gene-LFV90_01435;Name=LFV90_01435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_01435 DYDR01000003.1 Protein Homology CDS 156995 158554 . + 0 ID=cds-HJD60833.1;Parent=gene-LFV90_01435;Dbxref=NCBI_GP:HJD60833.1;Name=HJD60833.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011476866.1;locus_tag=LFV90_01435;product=SurA N-terminal domain-containing protein;protein_id=HJD60833.1;transl_table=11 DYDR01000003.1 tpg gene 158668 160155 . + . ID=gene-LFV90_01440;Name=LFV90_01440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_01440 DYDR01000003.1 Protein Homology CDS 158668 160155 . + 0 ID=cds-HJD60834.1;Parent=gene-LFV90_01440;Dbxref=NCBI_GP:HJD60834.1;Name=HJD60834.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014409666.1;locus_tag=LFV90_01440;product=UbiD family decarboxylase;protein_id=HJD60834.1;transl_table=11 DYDR01000003.1 tpg gene 160198 160281 . - . ID=gene-LFV90_01445;Name=LFV90_01445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_01445 DYDR01000003.1 Protein Homology CDS 160198 160281 . - 0 ID=cds-HJD60835.1;Parent=gene-LFV90_01445;Dbxref=NCBI_GP:HJD60835.1;Name=HJD60835.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR03776.1;locus_tag=LFV90_01445;product=palindromic element RPE5 domain-containing protein;protein_id=HJD60835.1;transl_table=11 DYDR01000003.1 tpg gene 160308 160514 . + . ID=gene-LFV90_01450;Name=LFV90_01450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_01450 DYDR01000003.1 GeneMarkS-2+ CDS 160308 160514 . + 0 ID=cds-HJD60836.1;Parent=gene-LFV90_01450;Dbxref=NCBI_GP:HJD60836.1;Name=HJD60836.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_01450;product=hypothetical protein;protein_id=HJD60836.1;transl_table=11 DYDR01000003.1 tpg gene 160546 161421 . + . ID=gene-LFV90_01455;Name=LFV90_01455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_01455 DYDR01000003.1 Protein Homology CDS 160546 161421 . + 0 ID=cds-HJD60837.1;Parent=gene-LFV90_01455;Dbxref=NCBI_GP:HJD60837.1;Name=HJD60837.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018827.2;locus_tag=LFV90_01455;product=hypothetical protein;protein_id=HJD60837.1;transl_table=11 DYDR01000003.1 tpg gene 161418 161936 . + . ID=gene-LFV90_01460;Name=LFV90_01460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_01460 DYDR01000003.1 Protein Homology CDS 161418 161936 . + 0 ID=cds-HJD60838.1;Parent=gene-LFV90_01460;Dbxref=NCBI_GP:HJD60838.1;Name=HJD60838.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012770.2;locus_tag=LFV90_01460;product=alpha/beta fold hydrolase;protein_id=HJD60838.1;transl_table=11 DYDR01000003.1 tpg gene 162069 162674 . + . ID=gene-LFV90_01465;Name=LFV90_01465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_01465 DYDR01000003.1 Protein Homology CDS 162069 162674 . + 0 ID=cds-HJD60839.1;Parent=gene-LFV90_01465;Dbxref=NCBI_GP:HJD60839.1;Name=HJD60839.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011476870.1;locus_tag=LFV90_01465;product=phospholipase D family protein;protein_id=HJD60839.1;transl_table=11 DYDR01000003.1 tpg gene 162894 163160 . - . ID=gene-LFV90_01470;Name=LFV90_01470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_01470 DYDR01000003.1 Protein Homology CDS 162894 163160 . - 0 ID=cds-HJD60840.1;Parent=gene-LFV90_01470;Dbxref=NCBI_GP:HJD60840.1;Name=HJD60840.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020918.2;locus_tag=LFV90_01470;product=phasin family protein;protein_id=HJD60840.1;transl_table=11 DYDR01000003.1 tpg gene 163552 164469 . + . ID=gene-LFV90_01475;Name=LFV90_01475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_01475 DYDR01000003.1 Protein Homology CDS 163552 164469 . + 0 ID=cds-HJD60841.1;Parent=gene-LFV90_01475;Dbxref=NCBI_GP:HJD60841.1;Name=HJD60841.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012150119.1;locus_tag=LFV90_01475;product=tyrosine recombinase XerC;protein_id=HJD60841.1;transl_table=11 DYDR01000003.1 tpg gene 164580 165011 . + . ID=gene-LFV90_01480;Name=dksA;gbkey=Gene;gene=dksA;gene_biotype=protein_coding;locus_tag=LFV90_01480 DYDR01000003.1 Protein Homology CDS 164580 165011 . + 0 ID=cds-HJD60842.1;Parent=gene-LFV90_01480;Dbxref=NCBI_GP:HJD60842.1;Name=HJD60842.1;gbkey=CDS;gene=dksA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011476873.1;locus_tag=LFV90_01480;product=RNA polymerase-binding protein DksA;protein_id=HJD60842.1;transl_table=11 DYDR01000003.1 tpg gene 165080 165547 . - . ID=gene-LFV90_01485;Name=LFV90_01485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_01485 DYDR01000003.1 Protein Homology CDS 165080 165547 . - 0 ID=cds-HJD60843.1;Parent=gene-LFV90_01485;Dbxref=NCBI_GP:HJD60843.1;Name=HJD60843.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011476874.1;locus_tag=LFV90_01485;product=peroxiredoxin;protein_id=HJD60843.1;transl_table=11 DYDR01000003.1 tpg gene 165772 166197 . + . ID=gene-LFV90_01490;Name=LFV90_01490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_01490 DYDR01000003.1 Protein Homology CDS 165772 166197 . + 0 ID=cds-HJD60844.1;Parent=gene-LFV90_01490;Dbxref=NCBI_GP:HJD60844.1;Name=HJD60844.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017442562.1;locus_tag=LFV90_01490;product=hypothetical protein;protein_id=HJD60844.1;transl_table=11 DYDR01000003.1 tpg gene 166548 166832 . + . ID=gene-LFV90_01495;Name=LFV90_01495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_01495 DYDR01000003.1 Protein Homology CDS 166548 166832 . + 0 ID=cds-HJD60845.1;Parent=gene-LFV90_01495;Dbxref=NCBI_GP:HJD60845.1;Name=HJD60845.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011270553.1;locus_tag=LFV90_01495;product=HU family DNA-binding protein;protein_id=HJD60845.1;transl_table=11 DYDR01000003.1 tpg gene 166819 167127 . + . ID=gene-LFV90_01500;Name=LFV90_01500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_01500 DYDR01000003.1 Protein Homology CDS 166819 167127 . + 0 ID=cds-HJD60846.1;Parent=gene-LFV90_01500;Dbxref=NCBI_GP:HJD60846.1;Name=HJD60846.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012151222.1;locus_tag=LFV90_01500;product=hypothetical protein;protein_id=HJD60846.1;transl_table=11 DYDR01000003.1 tpg pseudogene 167160 168135 . + . ID=gene-LFV90_01505;Name=LFV90_01505;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LFV90_01505;pseudo=true DYDR01000003.1 Protein Homology CDS 167160 168135 . + 0 ID=cds-LFV90_01505;Parent=gene-LFV90_01505;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011476877.1;locus_tag=LFV90_01505;product=glycoside hydrolase family 3 protein;pseudo=true;transl_table=11 DYDR01000003.1 tpg gene 168403 169008 . + . ID=gene-LFV90_01510;Name=LFV90_01510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_01510 DYDR01000003.1 Protein Homology CDS 168403 169008 . + 0 ID=cds-HJD60847.1;Parent=gene-LFV90_01510;Dbxref=NCBI_GP:HJD60847.1;Name=HJD60847.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012151220.1;locus_tag=LFV90_01510;product=bifunctional (p)ppGpp synthetase/guanosine-3'%2C5'-bis(diphosphate) 3'-pyrophosphohydrolase;protein_id=HJD60847.1;transl_table=11 DYDR01000003.1 tpg gene 169575 170825 . + . ID=gene-LFV90_01515;Name=LFV90_01515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_01515 DYDR01000003.1 GeneMarkS-2+ CDS 169575 170825 . + 0 ID=cds-HJD60848.1;Parent=gene-LFV90_01515;Dbxref=NCBI_GP:HJD60848.1;Name=HJD60848.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_01515;product=hypothetical protein;protein_id=HJD60848.1;transl_table=11 DYDR01000003.1 tpg gene 171038 171280 . - . ID=gene-LFV90_01520;Name=LFV90_01520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_01520 DYDR01000003.1 GeneMarkS-2+ CDS 171038 171280 . - 0 ID=cds-HJD60849.1;Parent=gene-LFV90_01520;Dbxref=NCBI_GP:HJD60849.1;Name=HJD60849.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_01520;product=hypothetical protein;protein_id=HJD60849.1;transl_table=11 DYDR01000003.1 tpg gene 171270 172664 . + . ID=gene-LFV90_01525;Name=LFV90_01525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_01525 DYDR01000003.1 Protein Homology CDS 171270 172664 . + 0 ID=cds-HJD60850.1;Parent=gene-LFV90_01525;Dbxref=NCBI_GP:HJD60850.1;Name=HJD60850.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR01414.1;locus_tag=LFV90_01525;product=autotransporter outer membrane beta-barrel domain-containing protein;protein_id=HJD60850.1;transl_table=11 DYDR01000003.1 tpg gene 172930 173895 . + . ID=gene-LFV90_01530;Name=lpxK;gbkey=Gene;gene=lpxK;gene_biotype=protein_coding;locus_tag=LFV90_01530 DYDR01000003.1 Protein Homology CDS 172930 173895 . + 0 ID=cds-HJD60851.1;Parent=gene-LFV90_01530;Dbxref=NCBI_GP:HJD60851.1;Name=HJD60851.1;gbkey=CDS;gene=lpxK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012152196.1;locus_tag=LFV90_01530;product=tetraacyldisaccharide 4'-kinase;protein_id=HJD60851.1;transl_table=11 DYDR01000003.1 tpg gene 173870 174745 . + . ID=gene-LFV90_01535;Name=LFV90_01535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_01535 DYDR01000003.1 Protein Homology CDS 173870 174745 . + 0 ID=cds-HJD60852.1;Parent=gene-LFV90_01535;Dbxref=NCBI_GP:HJD60852.1;Name=HJD60852.1;Note=Acylates the intermediate (KDO)2-lipid IVA to form (KDO)2-(lauroyl)-lipid IVA;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011476881.1;locus_tag=LFV90_01535;product=lipid A biosynthesis lauroyl acyltransferase;protein_id=HJD60852.1;transl_table=11 DYDR01000003.1 tpg gene 174949 175416 . - . ID=gene-LFV90_01540;Name=LFV90_01540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_01540 DYDR01000003.1 GeneMarkS-2+ CDS 174949 175416 . - 0 ID=cds-HJD60853.1;Parent=gene-LFV90_01540;Dbxref=NCBI_GP:HJD60853.1;Name=HJD60853.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_01540;product=hypothetical protein;protein_id=HJD60853.1;transl_table=11 DYDR01000003.1 tpg gene 175470 175664 . - . ID=gene-LFV90_01545;Name=LFV90_01545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_01545 DYDR01000003.1 GeneMarkS-2+ CDS 175470 175664 . - 0 ID=cds-HJD60854.1;Parent=gene-LFV90_01545;Dbxref=NCBI_GP:HJD60854.1;Name=HJD60854.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_01545;product=hypothetical protein;protein_id=HJD60854.1;transl_table=11 DYDR01000003.1 tpg gene 175742 175894 . - . ID=gene-LFV90_01550;Name=LFV90_01550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_01550 DYDR01000003.1 GeneMarkS-2+ CDS 175742 175894 . - 0 ID=cds-HJD60855.1;Parent=gene-LFV90_01550;Dbxref=NCBI_GP:HJD60855.1;Name=HJD60855.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_01550;product=hypothetical protein;protein_id=HJD60855.1;transl_table=11 DYDR01000003.1 tpg gene 175934 176332 . - . ID=gene-LFV90_01555;Name=LFV90_01555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_01555 DYDR01000003.1 GeneMarkS-2+ CDS 175934 176332 . - 0 ID=cds-HJD60856.1;Parent=gene-LFV90_01555;Dbxref=NCBI_GP:HJD60856.1;Name=HJD60856.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_01555;product=hypothetical protein;protein_id=HJD60856.1;transl_table=11 DYDR01000003.1 tpg gene 176425 177120 . - . ID=gene-LFV90_01560;Name=LFV90_01560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_01560 DYDR01000003.1 Protein Homology CDS 176425 177120 . - 0 ID=cds-HJD60857.1;Parent=gene-LFV90_01560;Dbxref=NCBI_GP:HJD60857.1;Name=HJD60857.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016917368.1;locus_tag=LFV90_01560;product=hypothetical protein;protein_id=HJD60857.1;transl_table=11 DYDR01000003.1 tpg pseudogene 177224 178086 . - . ID=gene-LFV90_01565;Name=LFV90_01565;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LFV90_01565;pseudo=true DYDR01000003.1 Protein Homology CDS 177224 178086 . - 0 ID=cds-LFV90_01565;Parent=gene-LFV90_01565;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014365479.1;locus_tag=LFV90_01565;product=M23 family metallopeptidase;pseudo=true;transl_table=11 DYDR01000003.1 tpg pseudogene 178076 178864 . - . ID=gene-LFV90_01570;Name=rlmJ;gbkey=Gene;gene=rlmJ;gene_biotype=pseudogene;locus_tag=LFV90_01570;pseudo=true DYDR01000003.1 Protein Homology CDS 178076 178864 . - 0 ID=cds-LFV90_01570;Parent=gene-LFV90_01570;Note=internal stop;gbkey=CDS;gene=rlmJ;inference=COORDINATES: protein motif:HMM:NF016278.2;locus_tag=LFV90_01570;product=23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ;pseudo=true;transl_table=11 DYDR01000003.1 tpg gene 178864 179124 . - . ID=gene-LFV90_01575;Name=LFV90_01575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_01575 DYDR01000003.1 Protein Homology CDS 178864 179124 . - 0 ID=cds-HJD60858.1;Parent=gene-LFV90_01575;Dbxref=NCBI_GP:HJD60858.1;Name=HJD60858.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR02385.1;locus_tag=LFV90_01575;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=HJD60858.1;transl_table=11 DYDR01000003.1 tpg gene 179486 179752 . + . ID=gene-LFV90_01580;Name=LFV90_01580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_01580 DYDR01000003.1 GeneMarkS-2+ CDS 179486 179752 . + 0 ID=cds-HJD60859.1;Parent=gene-LFV90_01580;Dbxref=NCBI_GP:HJD60859.1;Name=HJD60859.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_01580;product=hypothetical protein;protein_id=HJD60859.1;transl_table=11 DYDR01000003.1 tpg gene 180293 180976 . + . ID=gene-LFV90_01585;Name=LFV90_01585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_01585 DYDR01000003.1 GeneMarkS-2+ CDS 180293 180976 . + 0 ID=cds-HJD60860.1;Parent=gene-LFV90_01585;Dbxref=NCBI_GP:HJD60860.1;Name=HJD60860.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_01585;product=hypothetical protein;protein_id=HJD60860.1;transl_table=11 DYDR01000003.1 tpg gene 181241 181615 . + . ID=gene-LFV90_01590;Name=LFV90_01590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_01590 DYDR01000003.1 GeneMarkS-2+ CDS 181241 181615 . + 0 ID=cds-HJD60861.1;Parent=gene-LFV90_01590;Dbxref=NCBI_GP:HJD60861.1;Name=HJD60861.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_01590;product=hypothetical protein;protein_id=HJD60861.1;transl_table=11 DYDR01000003.1 tpg gene 181785 183866 . - . ID=gene-LFV90_01595;Name=ligA;gbkey=Gene;gene=ligA;gene_biotype=protein_coding;locus_tag=LFV90_01595 DYDR01000003.1 Protein Homology CDS 181785 183866 . - 0 ID=cds-HJD60862.1;Parent=gene-LFV90_01595;Dbxref=NCBI_GP:HJD60862.1;Name=HJD60862.1;gbkey=CDS;gene=ligA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010977672.1;locus_tag=LFV90_01595;product=NAD-dependent DNA ligase LigA;protein_id=HJD60862.1;transl_table=11 DYDR01000003.1 tpg gene 184497 186593 . - . ID=gene-LFV90_01600;Name=LFV90_01600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_01600 DYDR01000003.1 Protein Homology CDS 184497 186593 . - 0 ID=cds-HJD60863.1;Parent=gene-LFV90_01600;Dbxref=NCBI_GP:HJD60863.1;Name=HJD60863.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011191134.1;locus_tag=LFV90_01600;product=heme lyase CcmF/NrfE family subunit;protein_id=HJD60863.1;transl_table=11 DYDR01000003.1 tpg gene 186586 187860 . - . ID=gene-LFV90_01605;Name=LFV90_01605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_01605 DYDR01000003.1 Protein Homology CDS 186586 187860 . - 0 ID=cds-HJD60864.1;Parent=gene-LFV90_01605;Dbxref=NCBI_GP:HJD60864.1;Name=HJD60864.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017442551.1;locus_tag=LFV90_01605;product=HlyC/CorC family transporter;protein_id=HJD60864.1;transl_table=11 DYDR01000003.1 tpg gene 187987 189339 . - . ID=gene-LFV90_01610;Name=LFV90_01610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_01610 DYDR01000003.1 Protein Homology CDS 187987 189339 . - 0 ID=cds-HJD60865.1;Parent=gene-LFV90_01610;Dbxref=NCBI_GP:HJD60865.1;Name=HJD60865.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012719961.1;locus_tag=LFV90_01610;product=hypothetical protein;protein_id=HJD60865.1;transl_table=11 DYDR01000003.1 tpg gene 189398 190063 . - . ID=gene-LFV90_01615;Name=LFV90_01615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_01615 DYDR01000003.1 Protein Homology CDS 189398 190063 . - 0 ID=cds-HJD60866.1;Parent=gene-LFV90_01615;Dbxref=NCBI_GP:HJD60866.1;Name=HJD60866.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011191131.1;locus_tag=LFV90_01615;product=ABC transporter ATP-binding protein;protein_id=HJD60866.1;transl_table=11 DYDR01000003.1 tpg gene 190056 191303 . - . ID=gene-LFV90_01620;Name=LFV90_01620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_01620 DYDR01000003.1 Protein Homology CDS 190056 191303 . - 0 ID=cds-HJD60867.1;Parent=gene-LFV90_01620;Dbxref=NCBI_GP:HJD60867.1;Name=HJD60867.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014392687.1;locus_tag=LFV90_01620;product=lipoprotein-releasing ABC transporter permease subunit;protein_id=HJD60867.1;transl_table=11 DYDR01000003.1 tpg pseudogene 191421 192598 . - . ID=gene-LFV90_01625;Name=LFV90_01625;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LFV90_01625;pseudo=true DYDR01000003.1 Protein Homology CDS 191421 192598 . - 0 ID=cds-LFV90_01625;Parent=gene-LFV90_01625;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014410992.1;locus_tag=LFV90_01625;product=multidrug effflux MFS transporter;pseudo=true;transl_table=11 DYDR01000003.1 tpg gene 192787 193077 . - . ID=gene-LFV90_01630;Name=LFV90_01630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_01630 DYDR01000003.1 Protein Homology CDS 192787 193077 . - 0 ID=cds-HJD60868.1;Parent=gene-LFV90_01630;Dbxref=NCBI_GP:HJD60868.1;Name=HJD60868.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011476897.1;locus_tag=LFV90_01630;product=DUF2673 domain-containing protein;protein_id=HJD60868.1;transl_table=11 DYDR01000003.1 tpg gene 193262 194068 . - . ID=gene-LFV90_01635;Name=rsmA;gbkey=Gene;gene=rsmA;gene_biotype=protein_coding;locus_tag=LFV90_01635 DYDR01000003.1 Protein Homology CDS 193262 194068 . - 0 ID=cds-HJD60869.1;Parent=gene-LFV90_01635;Dbxref=NCBI_GP:HJD60869.1;Name=HJD60869.1;gbkey=CDS;gene=rsmA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012152186.1;locus_tag=LFV90_01635;product=16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA;protein_id=HJD60869.1;transl_table=11 DYDR01000003.1 tpg gene 194259 195047 . - . ID=gene-LFV90_01640;Name=xth;gbkey=Gene;gene=xth;gene_biotype=protein_coding;locus_tag=LFV90_01640 DYDR01000003.1 Protein Homology CDS 194259 195047 . - 0 ID=cds-HJD60870.1;Parent=gene-LFV90_01640;Dbxref=NCBI_GP:HJD60870.1;Name=HJD60870.1;gbkey=CDS;gene=xth;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012149928.1;locus_tag=LFV90_01640;product=exodeoxyribonuclease III;protein_id=HJD60870.1;transl_table=11 DYDR01000003.1 tpg gene 195108 196691 . - . ID=gene-LFV90_01645;Name=LFV90_01645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_01645 DYDR01000003.1 Protein Homology CDS 195108 196691 . - 0 ID=cds-HJD60871.1;Parent=gene-LFV90_01645;Dbxref=NCBI_GP:HJD60871.1;Name=HJD60871.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010421581.1;locus_tag=LFV90_01645;product=transporter substrate-binding domain-containing protein;protein_id=HJD60871.1;transl_table=11 DYDR01000003.1 tpg gene 196716 198044 . - . ID=gene-LFV90_01650;Name=xseA;gbkey=Gene;gene=xseA;gene_biotype=protein_coding;locus_tag=LFV90_01650 DYDR01000003.1 Protein Homology CDS 196716 198044 . - 0 ID=cds-HJD60872.1;Parent=gene-LFV90_01650;Dbxref=NCBI_GP:HJD60872.1;Name=HJD60872.1;gbkey=CDS;gene=xseA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011476902.1;locus_tag=LFV90_01650;product=exodeoxyribonuclease VII large subunit;protein_id=HJD60872.1;transl_table=11 DYDR01000003.1 tpg gene 198383 200521 . + . ID=gene-LFV90_01655;Name=LFV90_01655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_01655 DYDR01000003.1 Protein Homology CDS 198383 200521 . + 0 ID=cds-HJD60873.1;Parent=gene-LFV90_01655;Dbxref=NCBI_GP:HJD60873.1;Name=HJD60873.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012152183.1;locus_tag=LFV90_01655;product=LPS-assembly protein LptD;protein_id=HJD60873.1;transl_table=11 DYDR01000003.1 tpg gene 200719 201603 . + . ID=gene-LFV90_01660;Name=LFV90_01660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_01660 DYDR01000003.1 Protein Homology CDS 200719 201603 . + 0 ID=cds-HJD60874.1;Parent=gene-LFV90_01660;Dbxref=NCBI_GP:HJD60874.1;Name=HJD60874.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011191104.1;locus_tag=LFV90_01660;product=SurA N-terminal domain-containing protein;protein_id=HJD60874.1;transl_table=11 DYDR01000003.1 tpg gene 201709 201975 . + . ID=gene-LFV90_01665;Name=LFV90_01665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_01665 DYDR01000003.1 Protein Homology CDS 201709 201975 . + 0 ID=cds-HJD60875.1;Parent=gene-LFV90_01665;Dbxref=NCBI_GP:HJD60875.1;Name=HJD60875.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017442511.1;locus_tag=LFV90_01665;product=SemiSWEET family sugar transporter;protein_id=HJD60875.1;transl_table=11 DYDR01000003.1 tpg gene 201981 203324 . + . ID=gene-LFV90_01670;Name=der;gbkey=Gene;gene=der;gene_biotype=protein_coding;locus_tag=LFV90_01670 DYDR01000003.1 Protein Homology CDS 201981 203324 . + 0 ID=cds-HJD60876.1;Parent=gene-LFV90_01670;Dbxref=NCBI_GP:HJD60876.1;Name=HJD60876.1;gbkey=CDS;gene=der;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012149930.1;locus_tag=LFV90_01670;product=ribosome biogenesis GTPase Der;protein_id=HJD60876.1;transl_table=11 DYDR01000003.1 tpg gene 203615 204805 . - . ID=gene-LFV90_01675;Name=LFV90_01675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_01675 DYDR01000003.1 Protein Homology CDS 203615 204805 . - 0 ID=cds-HJD60877.1;Parent=gene-LFV90_01675;Dbxref=NCBI_GP:HJD60877.1;Name=HJD60877.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477073.1;locus_tag=LFV90_01675;product=DUF4143 domain-containing protein;protein_id=HJD60877.1;transl_table=11 DYDR01000003.1 tpg gene 204906 205202 . + . ID=gene-LFV90_01680;Name=LFV90_01680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_01680 DYDR01000003.1 Protein Homology CDS 204906 205202 . + 0 ID=cds-HJD60878.1;Parent=gene-LFV90_01680;Dbxref=NCBI_GP:HJD60878.1;Name=HJD60878.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010421575.1;locus_tag=LFV90_01680;product=type II toxin-antitoxin system HigB family toxin;protein_id=HJD60878.1;transl_table=11 DYDR01000003.1 tpg gene 205203 205577 . + . ID=gene-LFV90_01685;Name=LFV90_01685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_01685 DYDR01000003.1 Protein Homology CDS 205203 205577 . + 0 ID=cds-HJD60879.1;Parent=gene-LFV90_01685;Dbxref=NCBI_GP:HJD60879.1;Name=HJD60879.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010421572.1;locus_tag=LFV90_01685;product=helix-turn-helix domain-containing protein;protein_id=HJD60879.1;transl_table=11 DYDR01000003.1 tpg gene 205662 206102 . - . ID=gene-LFV90_01690;Name=LFV90_01690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_01690 DYDR01000003.1 GeneMarkS-2+ CDS 205662 206102 . - 0 ID=cds-HJD60880.1;Parent=gene-LFV90_01690;Dbxref=NCBI_GP:HJD60880.1;Name=HJD60880.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_01690;product=hypothetical protein;protein_id=HJD60880.1;transl_table=11 DYDR01000003.1 tpg gene 206110 206436 . - . ID=gene-LFV90_01695;Name=LFV90_01695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_01695 DYDR01000003.1 GeneMarkS-2+ CDS 206110 206436 . - 0 ID=cds-HJD60881.1;Parent=gene-LFV90_01695;Dbxref=NCBI_GP:HJD60881.1;Name=HJD60881.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_01695;product=hypothetical protein;protein_id=HJD60881.1;transl_table=11 DYDR01000003.1 tpg gene 206963 207295 . - . ID=gene-LFV90_01700;Name=LFV90_01700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_01700 DYDR01000003.1 GeneMarkS-2+ CDS 206963 207295 . - 0 ID=cds-HJD60882.1;Parent=gene-LFV90_01700;Dbxref=NCBI_GP:HJD60882.1;Name=HJD60882.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_01700;product=hypothetical protein;protein_id=HJD60882.1;transl_table=11 DYDR01000003.1 tpg gene 207417 208907 . - . ID=gene-LFV90_01705;Name=ubiB;gbkey=Gene;gene=ubiB;gene_biotype=protein_coding;locus_tag=LFV90_01705 DYDR01000003.1 Protein Homology CDS 207417 208907 . - 0 ID=cds-HJD60883.1;Parent=gene-LFV90_01705;Dbxref=NCBI_GP:HJD60883.1;Name=HJD60883.1;gbkey=CDS;gene=ubiB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017442518.1;locus_tag=LFV90_01705;product=2-polyprenylphenol 6-hydroxylase;protein_id=HJD60883.1;transl_table=11 DYDR01000003.1 tpg gene 208904 209650 . - . ID=gene-LFV90_01710;Name=ubiE;gbkey=Gene;gene=ubiE;gene_biotype=protein_coding;locus_tag=LFV90_01710 DYDR01000003.1 Protein Homology CDS 208904 209650 . - 0 ID=cds-HJD60884.1;Parent=gene-LFV90_01710;Dbxref=NCBI_GP:HJD60884.1;Name=HJD60884.1;gbkey=CDS;gene=ubiE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011476942.1;locus_tag=LFV90_01710;product=bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1%2C4-benzoquinol methylase UbiE;protein_id=HJD60884.1;transl_table=11 DYDR01000003.1 tpg gene 209656 210018 . - . ID=gene-LFV90_01715;Name=LFV90_01715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_01715 DYDR01000003.1 Protein Homology CDS 209656 210018 . - 0 ID=cds-HJD60885.1;Parent=gene-LFV90_01715;Dbxref=NCBI_GP:HJD60885.1;Name=HJD60885.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013970.2;locus_tag=LFV90_01715;product=type II toxin-antitoxin system VapC family toxin;protein_id=HJD60885.1;transl_table=11 DYDR01000003.1 tpg gene 210313 211134 . + . ID=gene-LFV90_01720;Name=mutM;gbkey=Gene;gene=mutM;gene_biotype=protein_coding;locus_tag=LFV90_01720 DYDR01000003.1 Protein Homology CDS 210313 211134 . + 0 ID=cds-HJD60886.1;Parent=gene-LFV90_01720;Dbxref=NCBI_GP:HJD60886.1;Name=HJD60886.1;gbkey=CDS;gene=mutM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011476941.1;locus_tag=LFV90_01720;product=bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase;protein_id=HJD60886.1;transl_table=11 DYDR01000003.1 tpg pseudogene 211223 211858 . + . ID=gene-LFV90_01725;Name=LFV90_01725;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LFV90_01725;pseudo=true DYDR01000003.1 Protein Homology CDS 211223 211858 . + 0 ID=cds-LFV90_01725;Parent=gene-LFV90_01725;Note=internal stop;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012695.2;locus_tag=LFV90_01725;product=hypothetical protein;pseudo=true;transl_table=11 DYDR01000003.1 tpg gene 211988 212239 . + . ID=gene-LFV90_01730;Name=LFV90_01730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_01730 DYDR01000003.1 GeneMarkS-2+ CDS 211988 212239 . + 0 ID=cds-HJD60887.1;Parent=gene-LFV90_01730;Dbxref=NCBI_GP:HJD60887.1;Name=HJD60887.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_01730;product=hypothetical protein;protein_id=HJD60887.1;transl_table=11 DYDR01000003.1 tpg gene 212241 212843 . + . ID=gene-LFV90_01735;Name=LFV90_01735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_01735 DYDR01000003.1 Protein Homology CDS 212241 212843 . + 0 ID=cds-HJD60888.1;Parent=gene-LFV90_01735;Dbxref=NCBI_GP:HJD60888.1;Name=HJD60888.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012152174.1;locus_tag=LFV90_01735;product=hypothetical protein;protein_id=HJD60888.1;transl_table=11 DYDR01000003.1 tpg gene 213163 213417 . + . ID=gene-LFV90_01740;Name=LFV90_01740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_01740 DYDR01000003.1 Protein Homology CDS 213163 213417 . + 0 ID=cds-HJD60889.1;Parent=gene-LFV90_01740;Dbxref=NCBI_GP:HJD60889.1;Name=HJD60889.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011476937.1;locus_tag=LFV90_01740;product=hypothetical protein;protein_id=HJD60889.1;transl_table=11 DYDR01000003.1 tpg gene 213666 214082 . - . ID=gene-LFV90_01745;Name=LFV90_01745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_01745 DYDR01000003.1 Protein Homology CDS 213666 214082 . - 0 ID=cds-HJD60890.1;Parent=gene-LFV90_01745;Dbxref=NCBI_GP:HJD60890.1;Name=HJD60890.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011478039.1;locus_tag=LFV90_01745;product=hypothetical protein;protein_id=HJD60890.1;transl_table=11 DYDR01000003.1 tpg gene 214684 215268 . - . ID=gene-LFV90_01750;Name=LFV90_01750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_01750 DYDR01000003.1 Protein Homology CDS 214684 215268 . - 0 ID=cds-HJD60891.1;Parent=gene-LFV90_01750;Dbxref=NCBI_GP:HJD60891.1;Name=HJD60891.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017208620.1;locus_tag=LFV90_01750;product=hypothetical protein;protein_id=HJD60891.1;transl_table=11 DYDR01000003.1 tpg gene 215370 215675 . - . ID=gene-LFV90_01755;Name=LFV90_01755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_01755 DYDR01000003.1 GeneMarkS-2+ CDS 215370 215675 . - 0 ID=cds-HJD60892.1;Parent=gene-LFV90_01755;Dbxref=NCBI_GP:HJD60892.1;Name=HJD60892.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_01755;product=hypothetical protein;protein_id=HJD60892.1;transl_table=11 DYDR01000003.1 tpg gene 215767 216636 . - . ID=gene-LFV90_01760;Name=LFV90_01760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_01760 DYDR01000003.1 Protein Homology CDS 215767 216636 . - 0 ID=cds-HJD60893.1;Parent=gene-LFV90_01760;Dbxref=NCBI_GP:HJD60893.1;Name=HJD60893.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014362521.1;locus_tag=LFV90_01760;product=TatD family hydrolase;protein_id=HJD60893.1;transl_table=11 DYDR01000003.1 tpg gene 216795 218336 . - . ID=gene-LFV90_01765;Name=metG;gbkey=Gene;gene=metG;gene_biotype=protein_coding;locus_tag=LFV90_01765 DYDR01000003.1 Protein Homology CDS 216795 218336 . - 0 ID=cds-HJD60894.1;Parent=gene-LFV90_01765;Dbxref=NCBI_GP:HJD60894.1;Name=HJD60894.1;gbkey=CDS;gene=metG;inference=COORDINATES: protein motif:HMM:NF008900.0;locus_tag=LFV90_01765;product=methionine--tRNA ligase;protein_id=HJD60894.1;transl_table=11 DYDR01000003.1 tpg gene 218333 218953 . - . ID=gene-LFV90_01770;Name=tmk;gbkey=Gene;gene=tmk;gene_biotype=protein_coding;locus_tag=LFV90_01770 DYDR01000003.1 Protein Homology CDS 218333 218953 . - 0 ID=cds-HJD60895.1;Parent=gene-LFV90_01770;Dbxref=NCBI_GP:HJD60895.1;Name=HJD60895.1;gbkey=CDS;gene=tmk;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012152168.1;locus_tag=LFV90_01770;product=dTMP kinase;protein_id=HJD60895.1;transl_table=11 DYDR01000003.1 tpg gene 219093 219491 . - . ID=gene-LFV90_01775;Name=LFV90_01775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_01775 DYDR01000003.1 Protein Homology CDS 219093 219491 . - 0 ID=cds-HJD60896.1;Parent=gene-LFV90_01775;Dbxref=NCBI_GP:HJD60896.1;Name=HJD60896.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011476930.1;locus_tag=LFV90_01775;product=DUF2660 domain-containing protein;protein_id=HJD60896.1;transl_table=11 DYDR01000003.1 tpg gene 219484 220734 . - . ID=gene-LFV90_01780;Name=LFV90_01780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_01780 DYDR01000003.1 Protein Homology CDS 219484 220734 . - 0 ID=cds-HJD60897.1;Parent=gene-LFV90_01780;Dbxref=NCBI_GP:HJD60897.1;Name=HJD60897.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011476929.1;locus_tag=LFV90_01780;product=hypothetical protein;protein_id=HJD60897.1;transl_table=11 DYDR01000003.1 tpg gene 220957 222318 . + . ID=gene-LFV90_01785;Name=LFV90_01785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_01785 DYDR01000003.1 Protein Homology CDS 220957 222318 . + 0 ID=cds-HJD60898.1;Parent=gene-LFV90_01785;Dbxref=NCBI_GP:HJD60898.1;Name=HJD60898.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012719488.1;locus_tag=LFV90_01785;product=TolC family protein;protein_id=HJD60898.1;transl_table=11 DYDR01000003.1 tpg gene 222319 222702 . + . ID=gene-LFV90_01790;Name=LFV90_01790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_01790 DYDR01000003.1 Protein Homology CDS 222319 222702 . + 0 ID=cds-HJD60899.1;Parent=gene-LFV90_01790;Dbxref=NCBI_GP:HJD60899.1;Name=HJD60899.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014362832.1;locus_tag=LFV90_01790;product=PopZ family protein;protein_id=HJD60899.1;transl_table=11 DYDR01000003.1 tpg gene 222961 224736 . + . ID=gene-LFV90_01795;Name=LFV90_01795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_01795 DYDR01000003.1 Protein Homology CDS 222961 224736 . + 0 ID=cds-HJD60900.1;Parent=gene-LFV90_01795;Dbxref=NCBI_GP:HJD60900.1;Name=HJD60900.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012736497.1;locus_tag=LFV90_01795;product=ankyrin repeat domain-containing protein;protein_id=HJD60900.1;transl_table=11 DYDR01000003.1 tpg gene 224855 226843 . + . ID=gene-LFV90_01800;Name=parE;gbkey=Gene;gene=parE;gene_biotype=protein_coding;locus_tag=LFV90_01800 DYDR01000003.1 Protein Homology CDS 224855 226843 . + 0 ID=cds-HJD60901.1;Parent=gene-LFV90_01800;Dbxref=NCBI_GP:HJD60901.1;Name=HJD60901.1;gbkey=CDS;gene=parE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011190687.1;locus_tag=LFV90_01800;product=DNA topoisomerase IV subunit B;protein_id=HJD60901.1;transl_table=11 DYDR01000003.1 tpg gene 227038 228399 . + . ID=gene-LFV90_01805;Name=LFV90_01805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_01805 DYDR01000003.1 Protein Homology CDS 227038 228399 . + 0 ID=cds-HJD60902.1;Parent=gene-LFV90_01805;Dbxref=NCBI_GP:HJD60902.1;Name=HJD60902.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011476923.1;locus_tag=LFV90_01805;product=S41 family peptidase;protein_id=HJD60902.1;transl_table=11 DYDR01000003.1 tpg gene 228463 228546 . + . ID=gene-LFV90_01810;Name=LFV90_01810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_01810 DYDR01000003.1 Protein Homology CDS 228463 228546 . + 0 ID=cds-HJD60903.1;Parent=gene-LFV90_01810;Dbxref=NCBI_GP:HJD60903.1;Name=HJD60903.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR03777.1;locus_tag=LFV90_01810;product=palindromic element RPE4 domain-containing protein;protein_id=HJD60903.1;transl_table=11 DYDR01000003.1 tpg gene 228708 230204 . + . ID=gene-LFV90_01815;Name=LFV90_01815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_01815 DYDR01000003.1 Protein Homology CDS 228708 230204 . + 0 ID=cds-HJD60904.1;Parent=gene-LFV90_01815;Dbxref=NCBI_GP:HJD60904.1;Name=HJD60904.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016728138.1;locus_tag=LFV90_01815;product=HAMP domain-containing histidine kinase;protein_id=HJD60904.1;transl_table=11 DYDR01000003.1 tpg gene 230525 231274 . + . ID=gene-LFV90_01820;Name=ybgF;gbkey=Gene;gene=ybgF;gene_biotype=protein_coding;locus_tag=LFV90_01820 DYDR01000003.1 Protein Homology CDS 230525 231274 . + 0 ID=cds-HJD60905.1;Parent=gene-LFV90_01820;Dbxref=NCBI_GP:HJD60905.1;Name=HJD60905.1;gbkey=CDS;gene=ybgF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012152161.1;locus_tag=LFV90_01820;product=tol-pal system protein YbgF;protein_id=HJD60905.1;transl_table=11 DYDR01000003.1 tpg gene 231280 231948 . + . ID=gene-LFV90_01825;Name=LFV90_01825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_01825 DYDR01000003.1 Protein Homology CDS 231280 231948 . + 0 ID=cds-HJD60906.1;Parent=gene-LFV90_01825;Dbxref=NCBI_GP:HJD60906.1;Name=HJD60906.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011476920.1;locus_tag=LFV90_01825;product=DUF2659 family protein;protein_id=HJD60906.1;transl_table=11 DYDR01000003.1 tpg gene 231967 233211 . + . ID=gene-LFV90_01830;Name=LFV90_01830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_01830 DYDR01000003.1 Protein Homology CDS 231967 233211 . + 0 ID=cds-HJD60907.1;Parent=gene-LFV90_01830;Dbxref=NCBI_GP:HJD60907.1;Name=HJD60907.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017443269.1;locus_tag=LFV90_01830;product=PQQ-binding-like beta-propeller repeat protein;protein_id=HJD60907.1;transl_table=11 DYDR01000003.1 tpg gene 233304 233771 . + . ID=gene-LFV90_01835;Name=rplM;gbkey=Gene;gene=rplM;gene_biotype=protein_coding;locus_tag=LFV90_01835 DYDR01000003.1 Protein Homology CDS 233304 233771 . + 0 ID=cds-HJD60908.1;Parent=gene-LFV90_01835;Dbxref=NCBI_GP:HJD60908.1;Name=HJD60908.1;gbkey=CDS;gene=rplM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011256772.1;locus_tag=LFV90_01835;product=50S ribosomal protein L13;protein_id=HJD60908.1;transl_table=11 DYDR01000003.1 tpg gene 233778 234272 . + . ID=gene-LFV90_01840;Name=rpsI;gbkey=Gene;gene=rpsI;gene_biotype=protein_coding;locus_tag=LFV90_01840 DYDR01000003.1 Protein Homology CDS 233778 234272 . + 0 ID=cds-HJD60909.1;Parent=gene-LFV90_01840;Dbxref=NCBI_GP:HJD60909.1;Name=HJD60909.1;gbkey=CDS;gene=rpsI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011476917.1;locus_tag=LFV90_01840;product=30S ribosomal protein S9;protein_id=HJD60909.1;transl_table=11 DYDR01000003.1 tpg gene 234595 234671 . + . ID=gene-LFV90_01845;Name=LFV90_01845;gbkey=Gene;gene_biotype=tRNA;locus_tag=LFV90_01845 DYDR01000003.1 tRNAscan-SE tRNA 234595 234671 . + . ID=rna-LFV90_01845;Parent=gene-LFV90_01845;anticodon=(pos:234629..234631);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=LFV90_01845;product=tRNA-Met DYDR01000003.1 tRNAscan-SE exon 234595 234671 . + . ID=exon-LFV90_01845-1;Parent=rna-LFV90_01845;anticodon=(pos:234629..234631);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=LFV90_01845;product=tRNA-Met DYDR01000003.1 tpg gene 235026 235415 . - . ID=gene-LFV90_01850;Name=LFV90_01850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_01850 DYDR01000003.1 GeneMarkS-2+ CDS 235026 235415 . - 0 ID=cds-HJD60910.1;Parent=gene-LFV90_01850;Dbxref=NCBI_GP:HJD60910.1;Name=HJD60910.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_01850;product=hypothetical protein;protein_id=HJD60910.1;transl_table=11 DYDR01000003.1 tpg gene 235625 235936 . + . ID=gene-LFV90_01855;Name=LFV90_01855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_01855 DYDR01000003.1 GeneMarkS-2+ CDS 235625 235936 . + 0 ID=cds-HJD60911.1;Parent=gene-LFV90_01855;Dbxref=NCBI_GP:HJD60911.1;Name=HJD60911.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_01855;product=hypothetical protein;protein_id=HJD60911.1;transl_table=11 DYDR01000003.1 tpg gene 235940 236131 . + . ID=gene-LFV90_01860;Name=LFV90_01860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_01860 DYDR01000003.1 GeneMarkS-2+ CDS 235940 236131 . + 0 ID=cds-HJD60912.1;Parent=gene-LFV90_01860;Dbxref=NCBI_GP:HJD60912.1;Name=HJD60912.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_01860;product=hypothetical protein;protein_id=HJD60912.1;transl_table=11 DYDR01000003.1 tpg gene 236721 236918 . - . ID=gene-LFV90_01865;Name=LFV90_01865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_01865 DYDR01000003.1 GeneMarkS-2+ CDS 236721 236918 . - 0 ID=cds-HJD60913.1;Parent=gene-LFV90_01865;Dbxref=NCBI_GP:HJD60913.1;Name=HJD60913.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_01865;product=hypothetical protein;protein_id=HJD60913.1;transl_table=11 DYDR01000003.1 tpg pseudogene 236915 237805 . - . ID=gene-LFV90_01870;Name=LFV90_01870;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LFV90_01870;pseudo=true DYDR01000003.1 Protein Homology CDS 236915 237805 . - 0 ID=cds-LFV90_01870;Parent=gene-LFV90_01870;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012253.2;locus_tag=LFV90_01870;product=ankyrin repeat domain-containing protein;pseudo=true;transl_table=11 DYDR01000003.1 tpg gene 237815 238264 . - . ID=gene-LFV90_01875;Name=LFV90_01875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_01875 DYDR01000003.1 GeneMarkS-2+ CDS 237815 238264 . - 0 ID=cds-HJD60914.1;Parent=gene-LFV90_01875;Dbxref=NCBI_GP:HJD60914.1;Name=HJD60914.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_01875;product=hypothetical protein;protein_id=HJD60914.1;transl_table=11 DYDR01000003.1 tpg gene 238396 238782 . - . ID=gene-LFV90_01880;Name=LFV90_01880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_01880 DYDR01000003.1 GeneMarkS-2+ CDS 238396 238782 . - 0 ID=cds-HJD60915.1;Parent=gene-LFV90_01880;Dbxref=NCBI_GP:HJD60915.1;Name=HJD60915.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_01880;product=hypothetical protein;protein_id=HJD60915.1;transl_table=11 DYDR01000003.1 tpg gene 238990 239232 . + . ID=gene-LFV90_01885;Name=LFV90_01885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_01885 DYDR01000003.1 GeneMarkS-2+ CDS 238990 239232 . + 0 ID=cds-HJD60916.1;Parent=gene-LFV90_01885;Dbxref=NCBI_GP:HJD60916.1;Name=HJD60916.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_01885;product=hypothetical protein;protein_id=HJD60916.1;transl_table=11 DYDR01000003.1 tpg gene 239356 240642 . - . ID=gene-LFV90_01890;Name=LFV90_01890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_01890 DYDR01000003.1 Protein Homology CDS 239356 240642 . - 0 ID=cds-HJD60917.1;Parent=gene-LFV90_01890;Dbxref=NCBI_GP:HJD60917.1;Name=HJD60917.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011476912.1;locus_tag=LFV90_01890;product=MFS transporter;protein_id=HJD60917.1;transl_table=11 DYDR01000003.1 tpg gene 240783 241931 . - . ID=gene-LFV90_01895;Name=LFV90_01895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_01895 DYDR01000003.1 Protein Homology CDS 240783 241931 . - 0 ID=cds-HJD60918.1;Parent=gene-LFV90_01895;Dbxref=NCBI_GP:HJD60918.1;Name=HJD60918.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016917046.1;locus_tag=LFV90_01895;product=hypothetical protein;protein_id=HJD60918.1;transl_table=11 DYDR01000003.1 tpg gene 242339 244420 . + . ID=gene-LFV90_01900;Name=LFV90_01900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_01900 DYDR01000003.1 Protein Homology CDS 242339 244420 . + 0 ID=cds-HJD60919.1;Parent=gene-LFV90_01900;Dbxref=NCBI_GP:HJD60919.1;Name=HJD60919.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011476910.1;locus_tag=LFV90_01900;product=Rne/Rng family ribonuclease;protein_id=HJD60919.1;transl_table=11 DYDR01000003.1 tpg gene 244557 244955 . + . ID=gene-LFV90_01905;Name=LFV90_01905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_01905 DYDR01000003.1 Protein Homology CDS 244557 244955 . + 0 ID=cds-HJD60920.1;Parent=gene-LFV90_01905;Dbxref=NCBI_GP:HJD60920.1;Name=HJD60920.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014021.2;locus_tag=LFV90_01905;product=nucleotidyltransferase domain-containing protein;protein_id=HJD60920.1;transl_table=11 DYDR01000003.1 tpg gene 244948 245286 . + . ID=gene-LFV90_01910;Name=LFV90_01910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_01910 DYDR01000003.1 GeneMarkS-2+ CDS 244948 245286 . + 0 ID=cds-HJD60921.1;Parent=gene-LFV90_01910;Dbxref=NCBI_GP:HJD60921.1;Name=HJD60921.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_01910;product=nucleotidyltransferase;protein_id=HJD60921.1;transl_table=11 DYDR01000003.1 tpg gene 245601 246653 . + . ID=gene-LFV90_01915;Name=LFV90_01915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_01915 DYDR01000003.1 Protein Homology CDS 245601 246653 . + 0 ID=cds-HJD60922.1;Parent=gene-LFV90_01915;Dbxref=NCBI_GP:HJD60922.1;Name=HJD60922.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041808456.1;locus_tag=LFV90_01915;product=COX15/CtaA family protein;protein_id=HJD60922.1;transl_table=11 DYDR01000003.1 tpg gene 246653 247558 . + . ID=gene-LFV90_01920;Name=LFV90_01920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_01920 DYDR01000003.1 Protein Homology CDS 246653 247558 . + 0 ID=cds-HJD60923.1;Parent=gene-LFV90_01920;Dbxref=NCBI_GP:HJD60923.1;Name=HJD60923.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011476949.1;locus_tag=LFV90_01920;product=RluA family pseudouridine synthase;protein_id=HJD60923.1;transl_table=11 DYDR01000003.1 tpg gene 247588 248778 . + . ID=gene-LFV90_01925;Name=LFV90_01925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_01925 DYDR01000003.1 Protein Homology CDS 247588 248778 . + 0 ID=cds-HJD60924.1;Parent=gene-LFV90_01925;Dbxref=NCBI_GP:HJD60924.1;Name=HJD60924.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011476950.1;locus_tag=LFV90_01925;product=beta-lactamase family protein;protein_id=HJD60924.1;transl_table=11 DYDR01000003.1 tpg gene 248779 249576 . + . ID=gene-LFV90_01930;Name=xth;gbkey=Gene;gene=xth;gene_biotype=protein_coding;locus_tag=LFV90_01930 DYDR01000003.1 Protein Homology CDS 248779 249576 . + 0 ID=cds-HJD60925.1;Parent=gene-LFV90_01930;Dbxref=NCBI_GP:HJD60925.1;Name=HJD60925.1;gbkey=CDS;gene=xth;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011476951.1;locus_tag=LFV90_01930;product=exodeoxyribonuclease III;protein_id=HJD60925.1;transl_table=11 DYDR01000003.1 tpg gene 249794 250774 . + . ID=gene-LFV90_01935;Name=pdhA;gbkey=Gene;gene=pdhA;gene_biotype=protein_coding;locus_tag=LFV90_01935 DYDR01000003.1 Protein Homology CDS 249794 250774 . + 0 ID=cds-HJD60926.1;Parent=gene-LFV90_01935;Dbxref=NCBI_GP:HJD60926.1;Name=HJD60926.1;gbkey=CDS;gene=pdhA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011476952.1;locus_tag=LFV90_01935;product=pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha;protein_id=HJD60926.1;transl_table=11 DYDR01000003.1 tpg gene 250988 251962 . + . ID=gene-LFV90_01940;Name=LFV90_01940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_01940 DYDR01000003.1 Protein Homology CDS 250988 251962 . + 0 ID=cds-HJD60927.1;Parent=gene-LFV90_01940;Dbxref=NCBI_GP:HJD60927.1;Name=HJD60927.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011476953.1;locus_tag=LFV90_01940;product=pyruvate dehydrogenase complex E1 component subunit beta;protein_id=HJD60927.1;transl_table=11 DYDR01000003.1 tpg gene 251980 252858 . + . ID=gene-LFV90_01945;Name=LFV90_01945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_01945 DYDR01000003.1 Protein Homology CDS 251980 252858 . + 0 ID=cds-HJD60928.1;Parent=gene-LFV90_01945;Dbxref=NCBI_GP:HJD60928.1;Name=HJD60928.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013884.2;locus_tag=LFV90_01945;product=acyltransferase;protein_id=HJD60928.1;transl_table=11 DYDR01000003.1 tpg gene 253306 253554 . - . ID=gene-LFV90_01950;Name=LFV90_01950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_01950 DYDR01000003.1 GeneMarkS-2+ CDS 253306 253554 . - 0 ID=cds-HJD60929.1;Parent=gene-LFV90_01950;Dbxref=NCBI_GP:HJD60929.1;Name=HJD60929.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_01950;product=hypothetical protein;protein_id=HJD60929.1;transl_table=11 DYDR01000003.1 tpg gene 253756 253974 . - . ID=gene-LFV90_01955;Name=LFV90_01955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_01955 DYDR01000003.1 GeneMarkS-2+ CDS 253756 253974 . - 0 ID=cds-HJD60930.1;Parent=gene-LFV90_01955;Dbxref=NCBI_GP:HJD60930.1;Name=HJD60930.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_01955;product=hypothetical protein;protein_id=HJD60930.1;transl_table=11 DYDR01000003.1 tpg gene 254101 255120 . + . ID=gene-LFV90_01960;Name=cydB;gbkey=Gene;gene=cydB;gene_biotype=protein_coding;locus_tag=LFV90_01960 DYDR01000003.1 Protein Homology CDS 254101 255120 . + 0 ID=cds-HJD60931.1;Parent=gene-LFV90_01960;Dbxref=NCBI_GP:HJD60931.1;Name=HJD60931.1;gbkey=CDS;gene=cydB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010423624.1;locus_tag=LFV90_01960;product=cytochrome d ubiquinol oxidase subunit II;protein_id=HJD60931.1;transl_table=11 DYDR01000003.1 tpg gene 255398 255727 . + . ID=gene-LFV90_01965;Name=LFV90_01965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_01965 DYDR01000003.1 GeneMarkS-2+ CDS 255398 255727 . + 0 ID=cds-HJD60932.1;Parent=gene-LFV90_01965;Dbxref=NCBI_GP:HJD60932.1;Name=HJD60932.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_01965;product=hypothetical protein;protein_id=HJD60932.1;transl_table=11 DYDR01000003.1 tpg gene 255775 256026 . + . ID=gene-LFV90_01970;Name=LFV90_01970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_01970 DYDR01000003.1 GeneMarkS-2+ CDS 255775 256026 . + 0 ID=cds-HJD60933.1;Parent=gene-LFV90_01970;Dbxref=NCBI_GP:HJD60933.1;Name=HJD60933.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_01970;product=hypothetical protein;protein_id=HJD60933.1;transl_table=11 DYDR01000003.1 tpg gene 256261 256875 . - . ID=gene-LFV90_01975;Name=LFV90_01975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_01975 DYDR01000003.1 Protein Homology CDS 256261 256875 . - 0 ID=cds-HJD60934.1;Parent=gene-LFV90_01975;Dbxref=NCBI_GP:HJD60934.1;Name=HJD60934.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025019.2;locus_tag=LFV90_01975;product=DUF4143 domain-containing protein;protein_id=HJD60934.1;transl_table=11 DYDR01000003.1 tpg pseudogene 257022 257415 . - . ID=gene-LFV90_01980;Name=LFV90_01980;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LFV90_01980;pseudo=true DYDR01000003.1 Protein Homology CDS 257022 257415 . - 0 ID=cds-LFV90_01980;Parent=gene-LFV90_01980;Note=frameshifted;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024571.2;locus_tag=LFV90_01980;product=AAA family ATPase;pseudo=true;transl_table=11 DYDR01000003.1 tpg gene 257684 258409 . + . ID=gene-LFV90_01985;Name=tolQ;gbkey=Gene;gene=tolQ;gene_biotype=protein_coding;locus_tag=LFV90_01985 DYDR01000003.1 Protein Homology CDS 257684 258409 . + 0 ID=cds-HJD60935.1;Parent=gene-LFV90_01985;Dbxref=NCBI_GP:HJD60935.1;Name=HJD60935.1;gbkey=CDS;gene=tolQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017443126.1;locus_tag=LFV90_01985;product=protein TolQ;protein_id=HJD60935.1;transl_table=11 DYDR01000003.1 tpg gene 258409 258840 . + . ID=gene-LFV90_01990;Name=tolR;gbkey=Gene;gene=tolR;gene_biotype=protein_coding;locus_tag=LFV90_01990 DYDR01000003.1 Protein Homology CDS 258409 258840 . + 0 ID=cds-HJD60936.1;Parent=gene-LFV90_01990;Dbxref=NCBI_GP:HJD60936.1;Name=HJD60936.1;gbkey=CDS;gene=tolR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004996134.1;locus_tag=LFV90_01990;product=protein TolR;protein_id=HJD60936.1;transl_table=11 DYDR01000003.1 tpg gene 258830 259305 . + . ID=gene-LFV90_01995;Name=LFV90_01995;end_range=259305,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_01995;partial=true DYDR01000003.1 Protein Homology CDS 258830 259305 . + 0 ID=cds-HJD60937.1;Parent=gene-LFV90_01995;Dbxref=NCBI_GP:HJD60937.1;Name=HJD60937.1;end_range=259305,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012150630.1;locus_tag=LFV90_01995;partial=true;product=energy transducer TonB;protein_id=HJD60937.1;transl_table=11 ##sequence-region DYDR01000004.1 1 67488 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2866300 DYDR01000004.1 tpg region 1 67488 . + . ID=DYDR01000004.1:1..67488;Dbxref=taxon:2866300;collection-date=2001-12-01;country=Madagascar: Toliara;environmental-sample=true;gbkey=Src;isolate=Choog2;isolation-source=Insect;metagenome-source=insect metagenome;metagenomic=true;mol_type=genomic DNA;nat-host=Columbicola hoogstraali DYDR01000004.1 tpg gene 250 2688 . + . ID=gene-LFV90_02000;Name=LFV90_02000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_02000 DYDR01000004.1 Protein Homology CDS 250 2688 . + 0 ID=cds-HJD60938.1;Parent=gene-LFV90_02000;Dbxref=NCBI_GP:HJD60938.1;Name=HJD60938.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012151755.1;locus_tag=LFV90_02000;product=valine--tRNA ligase;protein_id=HJD60938.1;transl_table=11 DYDR01000004.1 tpg gene 2657 3406 . + . ID=gene-LFV90_02005;Name=LFV90_02005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_02005 DYDR01000004.1 Protein Homology CDS 2657 3406 . + 0 ID=cds-HJD60939.1;Parent=gene-LFV90_02005;Dbxref=NCBI_GP:HJD60939.1;Name=HJD60939.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477180.1;locus_tag=LFV90_02005;product=LicD family protein;protein_id=HJD60939.1;transl_table=11 DYDR01000004.1 tpg gene 3672 4271 . + . ID=gene-LFV90_02010;Name=LFV90_02010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_02010 DYDR01000004.1 GeneMarkS-2+ CDS 3672 4271 . + 0 ID=cds-HJD60940.1;Parent=gene-LFV90_02010;Dbxref=NCBI_GP:HJD60940.1;Name=HJD60940.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_02010;product=hypothetical protein;protein_id=HJD60940.1;transl_table=11 DYDR01000004.1 tpg gene 4488 4979 . + . ID=gene-LFV90_02015;Name=LFV90_02015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_02015 DYDR01000004.1 GeneMarkS-2+ CDS 4488 4979 . + 0 ID=cds-HJD60941.1;Parent=gene-LFV90_02015;Dbxref=NCBI_GP:HJD60941.1;Name=HJD60941.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_02015;product=hypothetical protein;protein_id=HJD60941.1;transl_table=11 DYDR01000004.1 tpg gene 5107 5583 . + . ID=gene-LFV90_02020;Name=LFV90_02020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_02020 DYDR01000004.1 Protein Homology CDS 5107 5583 . + 0 ID=cds-HJD60942.1;Parent=gene-LFV90_02020;Dbxref=NCBI_GP:HJD60942.1;Name=HJD60942.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016917390.1;locus_tag=LFV90_02020;product=hypothetical protein;protein_id=HJD60942.1;transl_table=11 DYDR01000004.1 tpg gene 5697 5963 . + . ID=gene-LFV90_02025;Name=LFV90_02025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_02025 DYDR01000004.1 GeneMarkS-2+ CDS 5697 5963 . + 0 ID=cds-HJD60943.1;Parent=gene-LFV90_02025;Dbxref=NCBI_GP:HJD60943.1;Name=HJD60943.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_02025;product=hypothetical protein;protein_id=HJD60943.1;transl_table=11 DYDR01000004.1 tpg pseudogene 6323 7086 . + . ID=gene-LFV90_02030;Name=LFV90_02030;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LFV90_02030;pseudo=true DYDR01000004.1 Protein Homology CDS 6323 7086 . + 0 ID=cds-LFV90_02030;Parent=gene-LFV90_02030;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018549.2;locus_tag=LFV90_02030;product=hypothetical protein;pseudo=true;transl_table=11 DYDR01000004.1 tpg gene 7054 7917 . - . ID=gene-LFV90_02035;Name=LFV90_02035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_02035 DYDR01000004.1 Protein Homology CDS 7054 7917 . - 0 ID=cds-HJD60944.1;Parent=gene-LFV90_02035;Dbxref=NCBI_GP:HJD60944.1;Name=HJD60944.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477176.1;locus_tag=LFV90_02035;product=glycosyltransferase family 25 protein;protein_id=HJD60944.1;transl_table=11 DYDR01000004.1 tpg gene 7928 8611 . - . ID=gene-LFV90_02040;Name=LFV90_02040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_02040 DYDR01000004.1 Protein Homology CDS 7928 8611 . - 0 ID=cds-HJD60945.1;Parent=gene-LFV90_02040;Dbxref=NCBI_GP:HJD60945.1;Name=HJD60945.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013048.2;locus_tag=LFV90_02040;product=glycosyltransferase family 10;protein_id=HJD60945.1;transl_table=11 DYDR01000004.1 tpg gene 8563 8766 . - . ID=gene-LFV90_02045;Name=LFV90_02045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_02045 DYDR01000004.1 GeneMarkS-2+ CDS 8563 8766 . - 0 ID=cds-HJD60946.1;Parent=gene-LFV90_02045;Dbxref=NCBI_GP:HJD60946.1;Name=HJD60946.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_02045;product=hypothetical protein;protein_id=HJD60946.1;transl_table=11 DYDR01000004.1 tpg gene 8898 10184 . - . ID=gene-LFV90_02050;Name=LFV90_02050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_02050 DYDR01000004.1 Protein Homology CDS 8898 10184 . - 0 ID=cds-HJD60947.1;Parent=gene-LFV90_02050;Dbxref=NCBI_GP:HJD60947.1;Name=HJD60947.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477174.1;locus_tag=LFV90_02050;product=DNA recombination protein RmuC;protein_id=HJD60947.1;transl_table=11 DYDR01000004.1 tpg gene 10379 11662 . - . ID=gene-LFV90_02055;Name=clpX;gbkey=Gene;gene=clpX;gene_biotype=protein_coding;locus_tag=LFV90_02055 DYDR01000004.1 Protein Homology CDS 10379 11662 . - 0 ID=cds-HJD60948.1;Parent=gene-LFV90_02055;Dbxref=NCBI_GP:HJD60948.1;Name=HJD60948.1;gbkey=CDS;gene=clpX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012151748.1;locus_tag=LFV90_02055;product=ATP-dependent Clp protease ATP-binding subunit ClpX;protein_id=HJD60948.1;transl_table=11 DYDR01000004.1 tpg gene 11930 12481 . - . ID=gene-LFV90_02060;Name=LFV90_02060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_02060 DYDR01000004.1 Protein Homology CDS 11930 12481 . - 0 ID=cds-HJD60949.1;Parent=gene-LFV90_02060;Dbxref=NCBI_GP:HJD60949.1;Name=HJD60949.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017442542.1;locus_tag=LFV90_02060;product=GNAT family N-acetyltransferase;protein_id=HJD60949.1;transl_table=11 DYDR01000004.1 tpg gene 12630 13307 . - . ID=gene-LFV90_02065;Name=queC;gbkey=Gene;gene=queC;gene_biotype=protein_coding;locus_tag=LFV90_02065 DYDR01000004.1 Protein Homology CDS 12630 13307 . - 0 ID=cds-HJD60950.1;Parent=gene-LFV90_02065;Dbxref=NCBI_GP:HJD60950.1;Name=HJD60950.1;gbkey=CDS;gene=queC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477168.1;locus_tag=LFV90_02065;product=7-cyano-7-deazaguanine synthase QueC;protein_id=HJD60950.1;transl_table=11 DYDR01000004.1 tpg gene 13375 13551 . + . ID=gene-LFV90_02070;Name=LFV90_02070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_02070 DYDR01000004.1 Protein Homology CDS 13375 13551 . + 0 ID=cds-HJD60951.1;Parent=gene-LFV90_02070;Dbxref=NCBI_GP:HJD60951.1;Name=HJD60951.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012151747.1;locus_tag=LFV90_02070;product=hypothetical protein;protein_id=HJD60951.1;transl_table=11 DYDR01000004.1 tpg gene 13612 13688 . + . ID=gene-LFV90_02075;Name=LFV90_02075;gbkey=Gene;gene_biotype=tRNA;locus_tag=LFV90_02075 DYDR01000004.1 tRNAscan-SE tRNA 13612 13688 . + . ID=rna-LFV90_02075;Parent=gene-LFV90_02075;anticodon=(pos:13646..13648);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=LFV90_02075;product=tRNA-His DYDR01000004.1 tRNAscan-SE exon 13612 13688 . + . ID=exon-LFV90_02075-1;Parent=rna-LFV90_02075;anticodon=(pos:13646..13648);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=LFV90_02075;product=tRNA-His DYDR01000004.1 tpg gene 13888 15747 . + . ID=gene-LFV90_02080;Name=LFV90_02080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_02080 DYDR01000004.1 Protein Homology CDS 13888 15747 . + 0 ID=cds-HJD60952.1;Parent=gene-LFV90_02080;Dbxref=NCBI_GP:HJD60952.1;Name=HJD60952.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477164.1;locus_tag=LFV90_02080;product=ATP-binding cassette domain-containing protein;protein_id=HJD60952.1;transl_table=11 DYDR01000004.1 tpg pseudogene 15832 16244 . + . ID=gene-LFV90_02085;Name=LFV90_02085;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LFV90_02085;pseudo=true DYDR01000004.1 Protein Homology CDS 15832 16244 . + 0 ID=cds-LFV90_02085;Parent=gene-LFV90_02085;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020947.2;locus_tag=LFV90_02085;product=DUF2000 domain-containing protein;pseudo=true;transl_table=11 DYDR01000004.1 tpg pseudogene 16259 16585 . + . ID=gene-LFV90_02090;Name=LFV90_02090;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LFV90_02090;pseudo=true DYDR01000004.1 Protein Homology CDS 16259 16585 . + 0 ID=cds-LFV90_02090;Parent=gene-LFV90_02090;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017442994.1;locus_tag=LFV90_02090;product=NUDIX hydrolase;pseudo=true;transl_table=11 DYDR01000004.1 tpg gene 16688 16975 . - . ID=gene-LFV90_02095;Name=LFV90_02095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_02095 DYDR01000004.1 Protein Homology CDS 16688 16975 . - 0 ID=cds-HJD60953.1;Parent=gene-LFV90_02095;Dbxref=NCBI_GP:HJD60953.1;Name=HJD60953.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014408524.1;locus_tag=LFV90_02095;product=hypothetical protein;protein_id=HJD60953.1;transl_table=11 DYDR01000004.1 tpg gene 17037 17417 . - . ID=gene-LFV90_02100;Name=LFV90_02100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_02100 DYDR01000004.1 Protein Homology CDS 17037 17417 . - 0 ID=cds-HJD60954.1;Parent=gene-LFV90_02100;Dbxref=NCBI_GP:HJD60954.1;Name=HJD60954.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477160.1;locus_tag=LFV90_02100;product=nucleotide pyrophosphohydrolase;protein_id=HJD60954.1;transl_table=11 DYDR01000004.1 tpg gene 17430 17645 . - . ID=gene-LFV90_02105;Name=LFV90_02105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_02105 DYDR01000004.1 GeneMarkS-2+ CDS 17430 17645 . - 0 ID=cds-HJD60955.1;Parent=gene-LFV90_02105;Dbxref=NCBI_GP:HJD60955.1;Name=HJD60955.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_02105;product=hypothetical protein;protein_id=HJD60955.1;transl_table=11 DYDR01000004.1 tpg gene 17736 18065 . + . ID=gene-LFV90_02110;Name=LFV90_02110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_02110 DYDR01000004.1 Protein Homology CDS 17736 18065 . + 0 ID=cds-HJD60956.1;Parent=gene-LFV90_02110;Dbxref=NCBI_GP:HJD60956.1;Name=HJD60956.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018184.2;locus_tag=LFV90_02110;product=effector binding domain-containing protein;protein_id=HJD60956.1;transl_table=11 DYDR01000004.1 tpg pseudogene 18052 18603 . + . ID=gene-LFV90_02115;Name=LFV90_02115;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LFV90_02115;pseudo=true DYDR01000004.1 Protein Homology CDS 18052 18603 . + 0 ID=cds-LFV90_02115;Parent=gene-LFV90_02115;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002075262.1;locus_tag=LFV90_02115;product=CatB-related O-acetyltransferase;pseudo=true;transl_table=11 DYDR01000004.1 tpg gene 18752 19012 . + . ID=gene-LFV90_02120;Name=LFV90_02120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_02120 DYDR01000004.1 Protein Homology CDS 18752 19012 . + 0 ID=cds-HJD60957.1;Parent=gene-LFV90_02120;Dbxref=NCBI_GP:HJD60957.1;Name=HJD60957.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477154.1;locus_tag=LFV90_02120;product=type II toxin-antitoxin system prevent-host-death family antitoxin;protein_id=HJD60957.1;transl_table=11 DYDR01000004.1 tpg gene 19079 19834 . + . ID=gene-LFV90_02125;Name=LFV90_02125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_02125 DYDR01000004.1 Protein Homology CDS 19079 19834 . + 0 ID=cds-HJD60958.1;Parent=gene-LFV90_02125;Dbxref=NCBI_GP:HJD60958.1;Name=HJD60958.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022472.2;locus_tag=LFV90_02125;product=DUF2608 domain-containing protein;protein_id=HJD60958.1;transl_table=11 DYDR01000004.1 tpg gene 19873 20439 . + . ID=gene-LFV90_02130;Name=LFV90_02130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_02130 DYDR01000004.1 Protein Homology CDS 19873 20439 . + 0 ID=cds-HJD60959.1;Parent=gene-LFV90_02130;Dbxref=NCBI_GP:HJD60959.1;Name=HJD60959.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024635.2;locus_tag=LFV90_02130;product=ATP-binding protein;protein_id=HJD60959.1;transl_table=11 DYDR01000004.1 tpg pseudogene 20491 20614 . + . ID=gene-LFV90_02135;Name=LFV90_02135;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LFV90_02135;pseudo=true DYDR01000004.1 Protein Homology CDS 20491 20614 . + 0 ID=cds-LFV90_02135;Parent=gene-LFV90_02135;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477080.1;locus_tag=LFV90_02135;product=palindromic element RPE5 domain-containing protein;pseudo=true;transl_table=11 DYDR01000004.1 tpg pseudogene 20963 21837 . - . ID=gene-LFV90_02140;Name=LFV90_02140;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LFV90_02140;pseudo=true DYDR01000004.1 Protein Homology CDS 20963 21837 . - 0 ID=cds-LFV90_02140;Parent=gene-LFV90_02140;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024579.2;locus_tag=LFV90_02140;product=tetratricopeptide repeat protein;pseudo=true;transl_table=11 DYDR01000004.1 tpg gene 21845 21991 . - . ID=gene-LFV90_02145;Name=LFV90_02145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_02145 DYDR01000004.1 GeneMarkS-2+ CDS 21845 21991 . - 0 ID=cds-HJD60960.1;Parent=gene-LFV90_02145;Dbxref=NCBI_GP:HJD60960.1;Name=HJD60960.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_02145;product=hypothetical protein;protein_id=HJD60960.1;transl_table=11 DYDR01000004.1 tpg gene 22192 22449 . - . ID=gene-LFV90_02150;Name=LFV90_02150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_02150 DYDR01000004.1 Protein Homology CDS 22192 22449 . - 0 ID=cds-HJD60961.1;Parent=gene-LFV90_02150;Dbxref=NCBI_GP:HJD60961.1;Name=HJD60961.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014698.2;locus_tag=LFV90_02150;product=TauD/TfdA family dioxygenase;protein_id=HJD60961.1;transl_table=11 DYDR01000004.1 tpg pseudogene 22672 24439 . - . ID=gene-LFV90_02155;Name=LFV90_02155;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LFV90_02155;pseudo=true DYDR01000004.1 Protein Homology CDS 22672 24439 . - 0 ID=cds-LFV90_02155;Parent=gene-LFV90_02155;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015508568.1;locus_tag=LFV90_02155;product=prolyl oligopeptidase family serine peptidase;pseudo=true;transl_table=11 DYDR01000004.1 tpg gene 24485 24724 . - . ID=gene-LFV90_02160;Name=LFV90_02160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_02160 DYDR01000004.1 GeneMarkS-2+ CDS 24485 24724 . - 0 ID=cds-HJD60962.1;Parent=gene-LFV90_02160;Dbxref=NCBI_GP:HJD60962.1;Name=HJD60962.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_02160;product=hypothetical protein;protein_id=HJD60962.1;transl_table=11 DYDR01000004.1 tpg gene 25018 25437 . + . ID=gene-LFV90_02165;Name=LFV90_02165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_02165 DYDR01000004.1 GeneMarkS-2+ CDS 25018 25437 . + 0 ID=cds-HJD60963.1;Parent=gene-LFV90_02165;Dbxref=NCBI_GP:HJD60963.1;Name=HJD60963.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_02165;product=hypothetical protein;protein_id=HJD60963.1;transl_table=11 DYDR01000004.1 tpg gene 25498 25647 . - . ID=gene-LFV90_02170;Name=LFV90_02170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_02170 DYDR01000004.1 Protein Homology CDS 25498 25647 . - 0 ID=cds-HJD60964.1;Parent=gene-LFV90_02170;Dbxref=NCBI_GP:HJD60964.1;Name=HJD60964.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004596300.1;locus_tag=LFV90_02170;product=hypothetical protein;protein_id=HJD60964.1;transl_table=11 DYDR01000004.1 tpg gene 25858 26085 . + . ID=gene-LFV90_02175;Name=LFV90_02175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_02175 DYDR01000004.1 GeneMarkS-2+ CDS 25858 26085 . + 0 ID=cds-HJD60965.1;Parent=gene-LFV90_02175;Dbxref=NCBI_GP:HJD60965.1;Name=HJD60965.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_02175;product=hypothetical protein;protein_id=HJD60965.1;transl_table=11 DYDR01000004.1 tpg pseudogene 26237 26395 . + . ID=gene-LFV90_02180;Name=LFV90_02180;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LFV90_02180;pseudo=true DYDR01000004.1 Protein Homology CDS 26237 26395 . + 0 ID=cds-LFV90_02180;Parent=gene-LFV90_02180;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025569.2;locus_tag=LFV90_02180;product=hypothetical protein;pseudo=true;transl_table=11 DYDR01000004.1 tpg gene 26620 28118 . - . ID=gene-LFV90_02185;Name=LFV90_02185;gbkey=Gene;gene_biotype=rRNA;locus_tag=LFV90_02185 DYDR01000004.1 cmsearch rRNA 26620 28118 . - . ID=rna-LFV90_02185;Parent=gene-LFV90_02185;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LFV90_02185;product=16S ribosomal RNA DYDR01000004.1 cmsearch exon 26620 28118 . - . ID=exon-LFV90_02185-1;Parent=rna-LFV90_02185;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LFV90_02185;product=16S ribosomal RNA DYDR01000004.1 tpg gene 28556 28927 . - . ID=gene-LFV90_02190;Name=LFV90_02190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_02190 DYDR01000004.1 GeneMarkS-2+ CDS 28556 28927 . - 0 ID=cds-HJD60966.1;Parent=gene-LFV90_02190;Dbxref=NCBI_GP:HJD60966.1;Name=HJD60966.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_02190;product=hypothetical protein;protein_id=HJD60966.1;transl_table=11 DYDR01000004.1 tpg gene 29139 30971 . - . ID=gene-LFV90_02195;Name=LFV90_02195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_02195 DYDR01000004.1 Protein Homology CDS 29139 30971 . - 0 ID=cds-HJD60967.1;Parent=gene-LFV90_02195;Dbxref=NCBI_GP:HJD60967.1;Name=HJD60967.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477144.1;locus_tag=LFV90_02195;product=PAS domain-containing sensor histidine kinase;protein_id=HJD60967.1;transl_table=11 DYDR01000004.1 tpg gene 31243 33240 . - . ID=gene-LFV90_02200;Name=LFV90_02200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_02200 DYDR01000004.1 Protein Homology CDS 31243 33240 . - 0 ID=cds-HJD60968.1;Parent=gene-LFV90_02200;Dbxref=NCBI_GP:HJD60968.1;Name=HJD60968.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477143.1;locus_tag=LFV90_02200;product=acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha;protein_id=HJD60968.1;transl_table=11 DYDR01000004.1 tpg gene 33394 34938 . - . ID=gene-LFV90_02205;Name=LFV90_02205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_02205 DYDR01000004.1 Protein Homology CDS 33394 34938 . - 0 ID=cds-HJD60969.1;Parent=gene-LFV90_02205;Dbxref=NCBI_GP:HJD60969.1;Name=HJD60969.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017442440.1;locus_tag=LFV90_02205;product=acyl-CoA carboxylase subunit beta;protein_id=HJD60969.1;transl_table=11 DYDR01000004.1 tpg gene 35013 35150 . + . ID=gene-LFV90_02210;Name=LFV90_02210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_02210 DYDR01000004.1 Protein Homology CDS 35013 35150 . + 0 ID=cds-HJD60970.1;Parent=gene-LFV90_02210;Dbxref=NCBI_GP:HJD60970.1;Name=HJD60970.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012152025.1;locus_tag=LFV90_02210;product=hypothetical protein;protein_id=HJD60970.1;transl_table=11 DYDR01000004.1 tpg gene 35248 35787 . + . ID=gene-LFV90_02215;Name=LFV90_02215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_02215 DYDR01000004.1 Protein Homology CDS 35248 35787 . + 0 ID=cds-HJD60971.1;Parent=gene-LFV90_02215;Dbxref=NCBI_GP:HJD60971.1;Name=HJD60971.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF037547.2;locus_tag=LFV90_02215;product=DUF5410 domain-containing protein;protein_id=HJD60971.1;transl_table=11 DYDR01000004.1 tpg gene 35795 36088 . + . ID=gene-LFV90_02220;Name=LFV90_02220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_02220 DYDR01000004.1 GeneMarkS-2+ CDS 35795 36088 . + 0 ID=cds-HJD60972.1;Parent=gene-LFV90_02220;Dbxref=NCBI_GP:HJD60972.1;Name=HJD60972.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_02220;product=hypothetical protein;protein_id=HJD60972.1;transl_table=11 DYDR01000004.1 tpg gene 36328 36468 . + . ID=gene-LFV90_02225;Name=LFV90_02225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_02225 DYDR01000004.1 GeneMarkS-2+ CDS 36328 36468 . + 0 ID=cds-HJD60973.1;Parent=gene-LFV90_02225;Dbxref=NCBI_GP:HJD60973.1;Name=HJD60973.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_02225;product=hypothetical protein;protein_id=HJD60973.1;transl_table=11 DYDR01000004.1 tpg gene 36724 36981 . + . ID=gene-LFV90_02230;Name=LFV90_02230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_02230 DYDR01000004.1 Protein Homology CDS 36724 36981 . + 0 ID=cds-HJD60974.1;Parent=gene-LFV90_02230;Dbxref=NCBI_GP:HJD60974.1;Name=HJD60974.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010977557.1;locus_tag=LFV90_02230;product=AbrB/MazE/SpoVT family DNA-binding domain-containing protein;protein_id=HJD60974.1;transl_table=11 DYDR01000004.1 tpg gene 37035 37364 . + . ID=gene-LFV90_02235;Name=LFV90_02235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_02235 DYDR01000004.1 GeneMarkS-2+ CDS 37035 37364 . + 0 ID=cds-HJD60975.1;Parent=gene-LFV90_02235;Dbxref=NCBI_GP:HJD60975.1;Name=HJD60975.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_02235;product=PIN domain-containing protein;protein_id=HJD60975.1;transl_table=11 DYDR01000004.1 tpg gene 37385 40819 . + . ID=gene-LFV90_02240;Name=LFV90_02240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_02240 DYDR01000004.1 Protein Homology CDS 37385 40819 . + 0 ID=cds-HJD60976.1;Parent=gene-LFV90_02240;Dbxref=NCBI_GP:HJD60976.1;Name=HJD60976.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477139.1;locus_tag=LFV90_02240;product=acyl-[ACP]--phospholipid O-acyltransferase;protein_id=HJD60976.1;transl_table=11 DYDR01000004.1 tpg gene 41308 41616 . - . ID=gene-LFV90_02245;Name=LFV90_02245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_02245 DYDR01000004.1 Protein Homology CDS 41308 41616 . - 0 ID=cds-HJD60977.1;Parent=gene-LFV90_02245;Dbxref=NCBI_GP:HJD60977.1;Name=HJD60977.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012792.2;locus_tag=LFV90_02245;product=acetyltransferase;protein_id=HJD60977.1;transl_table=11 DYDR01000004.1 tpg gene 41666 41824 . - . ID=gene-LFV90_02250;Name=LFV90_02250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_02250 DYDR01000004.1 Protein Homology CDS 41666 41824 . - 0 ID=cds-HJD60978.1;Parent=gene-LFV90_02250;Dbxref=NCBI_GP:HJD60978.1;Name=HJD60978.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014410765.1;locus_tag=LFV90_02250;product=hypothetical protein;protein_id=HJD60978.1;transl_table=11 DYDR01000004.1 tpg gene 41899 42195 . - . ID=gene-LFV90_02255;Name=LFV90_02255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_02255 DYDR01000004.1 GeneMarkS-2+ CDS 41899 42195 . - 0 ID=cds-HJD60979.1;Parent=gene-LFV90_02255;Dbxref=NCBI_GP:HJD60979.1;Name=HJD60979.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_02255;product=hypothetical protein;protein_id=HJD60979.1;transl_table=11 DYDR01000004.1 tpg gene 42223 42639 . - . ID=gene-LFV90_02260;Name=LFV90_02260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_02260 DYDR01000004.1 GeneMarkS-2+ CDS 42223 42639 . - 0 ID=cds-HJD60980.1;Parent=gene-LFV90_02260;Dbxref=NCBI_GP:HJD60980.1;Name=HJD60980.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_02260;product=hypothetical protein;protein_id=HJD60980.1;transl_table=11 DYDR01000004.1 tpg gene 42694 42930 . - . ID=gene-LFV90_02265;Name=LFV90_02265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_02265 DYDR01000004.1 Protein Homology CDS 42694 42930 . - 0 ID=cds-HJD60981.1;Parent=gene-LFV90_02265;Dbxref=NCBI_GP:HJD60981.1;Name=HJD60981.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014364764.1;locus_tag=LFV90_02265;product=hypothetical protein;protein_id=HJD60981.1;transl_table=11 DYDR01000004.1 tpg gene 43014 43373 . - . ID=gene-LFV90_02270;Name=LFV90_02270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_02270 DYDR01000004.1 Protein Homology CDS 43014 43373 . - 0 ID=cds-HJD60982.1;Parent=gene-LFV90_02270;Dbxref=NCBI_GP:HJD60982.1;Name=HJD60982.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014408697.1;locus_tag=LFV90_02270;product=GNAT family N-acetyltransferase;protein_id=HJD60982.1;transl_table=11 DYDR01000004.1 tpg gene 43370 43813 . - . ID=gene-LFV90_02275;Name=LFV90_02275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_02275 DYDR01000004.1 Protein Homology CDS 43370 43813 . - 0 ID=cds-HJD60983.1;Parent=gene-LFV90_02275;Dbxref=NCBI_GP:HJD60983.1;Name=HJD60983.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012514.2;locus_tag=LFV90_02275;product=NUDIX domain-containing protein;protein_id=HJD60983.1;transl_table=11 DYDR01000004.1 tpg pseudogene 43878 44414 . - . ID=gene-LFV90_02280;Name=LFV90_02280;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LFV90_02280;pseudo=true DYDR01000004.1 Protein Homology CDS 43878 44414 . - 0 ID=cds-LFV90_02280;Parent=gene-LFV90_02280;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017442447.1;locus_tag=LFV90_02280;product=invasion associated locus B family protein;pseudo=true;transl_table=11 DYDR01000004.1 tpg gene 44411 45805 . - . ID=gene-LFV90_02285;Name=gltX;gbkey=Gene;gene=gltX;gene_biotype=protein_coding;locus_tag=LFV90_02285 DYDR01000004.1 Protein Homology CDS 44411 45805 . - 0 ID=cds-HJD60984.1;Parent=gene-LFV90_02285;Dbxref=NCBI_GP:HJD60984.1;Name=HJD60984.1;gbkey=CDS;gene=gltX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477131.1;locus_tag=LFV90_02285;product=glutamate--tRNA ligase;protein_id=HJD60984.1;transl_table=11 DYDR01000004.1 tpg gene 45956 46660 . - . ID=gene-LFV90_02290;Name=ubiG;gbkey=Gene;gene=ubiG;gene_biotype=protein_coding;locus_tag=LFV90_02290 DYDR01000004.1 Protein Homology CDS 45956 46660 . - 0 ID=cds-HJD60985.1;Parent=gene-LFV90_02290;Dbxref=NCBI_GP:HJD60985.1;Name=HJD60985.1;gbkey=CDS;gene=ubiG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004596275.1;locus_tag=LFV90_02290;product=bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG;protein_id=HJD60985.1;transl_table=11 DYDR01000004.1 tpg gene 46678 47457 . + . ID=gene-LFV90_02295;Name=LFV90_02295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_02295 DYDR01000004.1 Protein Homology CDS 46678 47457 . + 0 ID=cds-HJD60986.1;Parent=gene-LFV90_02295;Dbxref=NCBI_GP:HJD60986.1;Name=HJD60986.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477129.1;locus_tag=LFV90_02295;product=metal ABC transporter permease;protein_id=HJD60986.1;transl_table=11 DYDR01000004.1 tpg gene 47699 47899 . - . ID=gene-LFV90_02300;Name=rpsU;gbkey=Gene;gene=rpsU;gene_biotype=protein_coding;locus_tag=LFV90_02300 DYDR01000004.1 Protein Homology CDS 47699 47899 . - 0 ID=cds-HJD60987.1;Parent=gene-LFV90_02300;Dbxref=NCBI_GP:HJD60987.1;Name=HJD60987.1;gbkey=CDS;gene=rpsU;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004997902.1;locus_tag=LFV90_02300;product=30S ribosomal protein S21;protein_id=HJD60987.1;transl_table=11 DYDR01000004.1 tpg gene 47984 48595 . + . ID=gene-LFV90_02305;Name=LFV90_02305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_02305 DYDR01000004.1 Protein Homology CDS 47984 48595 . + 0 ID=cds-HJD60988.1;Parent=gene-LFV90_02305;Dbxref=NCBI_GP:HJD60988.1;Name=HJD60988.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017442434.1;locus_tag=LFV90_02305;product=COQ9 family protein;protein_id=HJD60988.1;transl_table=11 DYDR01000004.1 tpg gene 49046 49240 . + . ID=gene-LFV90_02310;Name=LFV90_02310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_02310 DYDR01000004.1 GeneMarkS-2+ CDS 49046 49240 . + 0 ID=cds-HJD60989.1;Parent=gene-LFV90_02310;Dbxref=NCBI_GP:HJD60989.1;Name=HJD60989.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_02310;product=hypothetical protein;protein_id=HJD60989.1;transl_table=11 DYDR01000004.1 tpg gene 49279 49641 . - . ID=gene-LFV90_02315;Name=LFV90_02315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_02315 DYDR01000004.1 GeneMarkS-2+ CDS 49279 49641 . - 0 ID=cds-HJD60990.1;Parent=gene-LFV90_02315;Dbxref=NCBI_GP:HJD60990.1;Name=HJD60990.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_02315;product=hypothetical protein;protein_id=HJD60990.1;transl_table=11 DYDR01000004.1 tpg gene 49880 49956 . + . ID=gene-LFV90_02320;Name=LFV90_02320;gbkey=Gene;gene_biotype=tRNA;locus_tag=LFV90_02320 DYDR01000004.1 tRNAscan-SE tRNA 49880 49956 . + . ID=rna-LFV90_02320;Parent=gene-LFV90_02320;anticodon=(pos:49914..49916);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=LFV90_02320;product=tRNA-Arg DYDR01000004.1 tRNAscan-SE exon 49880 49956 . + . ID=exon-LFV90_02320-1;Parent=rna-LFV90_02320;anticodon=(pos:49914..49916);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=LFV90_02320;product=tRNA-Arg DYDR01000004.1 tpg gene 50077 50316 . - . ID=gene-LFV90_02325;Name=LFV90_02325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_02325 DYDR01000004.1 GeneMarkS-2+ CDS 50077 50316 . - 0 ID=cds-HJD60991.1;Parent=gene-LFV90_02325;Dbxref=NCBI_GP:HJD60991.1;Name=HJD60991.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_02325;product=hypothetical protein;protein_id=HJD60991.1;transl_table=11 DYDR01000004.1 tpg gene 50393 50614 . - . ID=gene-LFV90_02330;Name=LFV90_02330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_02330 DYDR01000004.1 Protein Homology CDS 50393 50614 . - 0 ID=cds-HJD60992.1;Parent=gene-LFV90_02330;Dbxref=NCBI_GP:HJD60992.1;Name=HJD60992.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012152035.1;locus_tag=LFV90_02330;product=hypothetical protein;protein_id=HJD60992.1;transl_table=11 DYDR01000004.1 tpg gene 50659 51408 . - . ID=gene-LFV90_02335;Name=LFV90_02335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_02335 DYDR01000004.1 Protein Homology CDS 50659 51408 . - 0 ID=cds-HJD60993.1;Parent=gene-LFV90_02335;Dbxref=NCBI_GP:HJD60993.1;Name=HJD60993.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021354.2;locus_tag=LFV90_02335;product=biotin--protein ligase;protein_id=HJD60993.1;transl_table=11 DYDR01000004.1 tpg gene 51846 52340 . + . ID=gene-LFV90_02340;Name=LFV90_02340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_02340 DYDR01000004.1 Protein Homology CDS 51846 52340 . + 0 ID=cds-HJD60994.1;Parent=gene-LFV90_02340;Dbxref=NCBI_GP:HJD60994.1;Name=HJD60994.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024206.2;locus_tag=LFV90_02340;product=ankyrin repeat domain-containing protein;protein_id=HJD60994.1;transl_table=11 DYDR01000004.1 tpg gene 52486 52587 . + . ID=gene-LFV90_02345;Name=LFV90_02345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_02345 DYDR01000004.1 Protein Homology CDS 52486 52587 . + 0 ID=cds-HJD60995.1;Parent=gene-LFV90_02345;Dbxref=NCBI_GP:HJD60995.1;Name=HJD60995.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024206.2;locus_tag=LFV90_02345;product=ankyrin repeat domain-containing protein;protein_id=HJD60995.1;transl_table=11 DYDR01000004.1 tpg gene 52814 53296 . + . ID=gene-LFV90_02350;Name=LFV90_02350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_02350 DYDR01000004.1 Protein Homology CDS 52814 53296 . + 0 ID=cds-HJD60996.1;Parent=gene-LFV90_02350;Dbxref=NCBI_GP:HJD60996.1;Name=HJD60996.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024206.2;locus_tag=LFV90_02350;product=ankyrin repeat domain-containing protein;protein_id=HJD60996.1;transl_table=11 DYDR01000004.1 tpg gene 53691 54434 . + . ID=gene-LFV90_02355;Name=LFV90_02355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_02355 DYDR01000004.1 GeneMarkS-2+ CDS 53691 54434 . + 0 ID=cds-HJD60997.1;Parent=gene-LFV90_02355;Dbxref=NCBI_GP:HJD60997.1;Name=HJD60997.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_02355;product=hypothetical protein;protein_id=HJD60997.1;transl_table=11 DYDR01000004.1 tpg gene 54576 54854 . - . ID=gene-LFV90_02360;Name=LFV90_02360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_02360 DYDR01000004.1 GeneMarkS-2+ CDS 54576 54854 . - 0 ID=cds-HJD60998.1;Parent=gene-LFV90_02360;Dbxref=NCBI_GP:HJD60998.1;Name=HJD60998.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_02360;product=hypothetical protein;protein_id=HJD60998.1;transl_table=11 DYDR01000004.1 tpg gene 54857 55036 . - . ID=gene-LFV90_02365;Name=LFV90_02365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_02365 DYDR01000004.1 GeneMarkS-2+ CDS 54857 55036 . - 0 ID=cds-HJD60999.1;Parent=gene-LFV90_02365;Dbxref=NCBI_GP:HJD60999.1;Name=HJD60999.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_02365;product=hypothetical protein;protein_id=HJD60999.1;transl_table=11 DYDR01000004.1 tpg gene 55408 55797 . + . ID=gene-LFV90_02370;Name=LFV90_02370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_02370 DYDR01000004.1 Protein Homology CDS 55408 55797 . + 0 ID=cds-HJD61000.1;Parent=gene-LFV90_02370;Dbxref=NCBI_GP:HJD61000.1;Name=HJD61000.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015786.2;locus_tag=LFV90_02370;product=methyltransferase domain-containing protein;protein_id=HJD61000.1;transl_table=11 DYDR01000004.1 tpg gene 55791 55937 . - . ID=gene-LFV90_02375;Name=LFV90_02375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_02375 DYDR01000004.1 GeneMarkS-2+ CDS 55791 55937 . - 0 ID=cds-HJD61001.1;Parent=gene-LFV90_02375;Dbxref=NCBI_GP:HJD61001.1;Name=HJD61001.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_02375;product=hypothetical protein;protein_id=HJD61001.1;transl_table=11 DYDR01000004.1 tpg gene 55971 56264 . + . ID=gene-LFV90_02380;Name=LFV90_02380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_02380 DYDR01000004.1 GeneMarkS-2+ CDS 55971 56264 . + 0 ID=cds-HJD61002.1;Parent=gene-LFV90_02380;Dbxref=NCBI_GP:HJD61002.1;Name=HJD61002.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_02380;product=hypothetical protein;protein_id=HJD61002.1;transl_table=11 DYDR01000004.1 tpg gene 56606 57538 . - . ID=gene-LFV90_02385;Name=trxB;gbkey=Gene;gene=trxB;gene_biotype=protein_coding;locus_tag=LFV90_02385 DYDR01000004.1 Protein Homology CDS 56606 57538 . - 0 ID=cds-HJD61003.1;Parent=gene-LFV90_02385;Dbxref=NCBI_GP:HJD61003.1;Name=HJD61003.1;gbkey=CDS;gene=trxB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017442962.1;locus_tag=LFV90_02385;product=thioredoxin-disulfide reductase;protein_id=HJD61003.1;transl_table=11 DYDR01000004.1 tpg gene 57558 58427 . - . ID=gene-LFV90_02390;Name=LFV90_02390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_02390 DYDR01000004.1 Protein Homology CDS 57558 58427 . - 0 ID=cds-HJD61004.1;Parent=gene-LFV90_02390;Dbxref=NCBI_GP:HJD61004.1;Name=HJD61004.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012152039.1;locus_tag=LFV90_02390;product=alpha/beta hydrolase;protein_id=HJD61004.1;transl_table=11 DYDR01000004.1 tpg gene 58437 59366 . - . ID=gene-LFV90_02395;Name=LFV90_02395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_02395 DYDR01000004.1 Protein Homology CDS 58437 59366 . - 0 ID=cds-HJD61005.1;Parent=gene-LFV90_02395;Dbxref=NCBI_GP:HJD61005.1;Name=HJD61005.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016916771.1;locus_tag=LFV90_02395;product=AEC family transporter;protein_id=HJD61005.1;transl_table=11 DYDR01000004.1 tpg gene 59577 60083 . + . ID=gene-LFV90_02400;Name=LFV90_02400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_02400 DYDR01000004.1 Protein Homology CDS 59577 60083 . + 0 ID=cds-HJD61006.1;Parent=gene-LFV90_02400;Dbxref=NCBI_GP:HJD61006.1;Name=HJD61006.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011271008.1;locus_tag=LFV90_02400;product=hypothetical protein;protein_id=HJD61006.1;transl_table=11 DYDR01000004.1 tpg gene 60354 60770 . - . ID=gene-LFV90_02405;Name=LFV90_02405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_02405 DYDR01000004.1 GeneMarkS-2+ CDS 60354 60770 . - 0 ID=cds-HJD61007.1;Parent=gene-LFV90_02405;Dbxref=NCBI_GP:HJD61007.1;Name=HJD61007.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_02405;product=hypothetical protein;protein_id=HJD61007.1;transl_table=11 DYDR01000004.1 tpg gene 61194 61637 . - . ID=gene-LFV90_02410;Name=LFV90_02410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_02410 DYDR01000004.1 Protein Homology CDS 61194 61637 . - 0 ID=cds-HJD61008.1;Parent=gene-LFV90_02410;Dbxref=NCBI_GP:HJD61008.1;Name=HJD61008.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024906.2;locus_tag=LFV90_02410;product=hypothetical protein;protein_id=HJD61008.1;transl_table=11 DYDR01000004.1 tpg gene 61752 61970 . - . ID=gene-LFV90_02415;Name=LFV90_02415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_02415 DYDR01000004.1 GeneMarkS-2+ CDS 61752 61970 . - 0 ID=cds-HJD61009.1;Parent=gene-LFV90_02415;Dbxref=NCBI_GP:HJD61009.1;Name=HJD61009.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_02415;product=hypothetical protein;protein_id=HJD61009.1;transl_table=11 DYDR01000004.1 tpg gene 62213 62464 . - . ID=gene-LFV90_02420;Name=LFV90_02420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_02420 DYDR01000004.1 Protein Homology CDS 62213 62464 . - 0 ID=cds-HJD61010.1;Parent=gene-LFV90_02420;Dbxref=NCBI_GP:HJD61010.1;Name=HJD61010.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013152.2;locus_tag=LFV90_02420;product=glycoside hydrolase family protein;protein_id=HJD61010.1;transl_table=11 DYDR01000004.1 tpg gene 62606 62681 . - . ID=gene-LFV90_02425;Name=LFV90_02425;gbkey=Gene;gene_biotype=tRNA;locus_tag=LFV90_02425 DYDR01000004.1 tRNAscan-SE tRNA 62606 62681 . - . ID=rna-LFV90_02425;Parent=gene-LFV90_02425;anticodon=(pos:complement(62646..62648));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=LFV90_02425;product=tRNA-Ala DYDR01000004.1 tRNAscan-SE exon 62606 62681 . - . ID=exon-LFV90_02425-1;Parent=rna-LFV90_02425;anticodon=(pos:complement(62646..62648));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=LFV90_02425;product=tRNA-Ala DYDR01000004.1 tpg gene 63242 63850 . - . ID=gene-LFV90_02430;Name=clpP;gbkey=Gene;gene=clpP;gene_biotype=protein_coding;locus_tag=LFV90_02430 DYDR01000004.1 Protein Homology CDS 63242 63850 . - 0 ID=cds-HJD61011.1;Parent=gene-LFV90_02430;Dbxref=NCBI_GP:HJD61011.1;Name=HJD61011.1;gbkey=CDS;gene=clpP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014869237.1;locus_tag=LFV90_02430;product=ATP-dependent Clp endopeptidase proteolytic subunit ClpP;protein_id=HJD61011.1;transl_table=11 DYDR01000004.1 tpg gene 64104 65822 . - . ID=gene-LFV90_02435;Name=LFV90_02435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_02435 DYDR01000004.1 Protein Homology CDS 64104 65822 . - 0 ID=cds-HJD61012.1;Parent=gene-LFV90_02435;Dbxref=NCBI_GP:HJD61012.1;Name=HJD61012.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477102.1;locus_tag=LFV90_02435;product=30S ribosomal protein S1;protein_id=HJD61012.1;transl_table=11 DYDR01000004.1 tpg gene 66177 66830 . - . ID=gene-LFV90_02440;Name=cmk;gbkey=Gene;gene=cmk;gene_biotype=protein_coding;locus_tag=LFV90_02440 DYDR01000004.1 Protein Homology CDS 66177 66830 . - 0 ID=cds-HJD61013.1;Parent=gene-LFV90_02440;Dbxref=NCBI_GP:HJD61013.1;Name=HJD61013.1;gbkey=CDS;gene=cmk;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477103.1;locus_tag=LFV90_02440;product=(d)CMP kinase;protein_id=HJD61013.1;transl_table=11 DYDR01000004.1 tpg gene 66930 67006 . + . ID=gene-LFV90_02445;Name=LFV90_02445;gbkey=Gene;gene_biotype=tRNA;locus_tag=LFV90_02445 DYDR01000004.1 tRNAscan-SE tRNA 66930 67006 . + . ID=rna-LFV90_02445;Parent=gene-LFV90_02445;anticodon=(pos:66964..66966);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=LFV90_02445;product=tRNA-Val DYDR01000004.1 tRNAscan-SE exon 66930 67006 . + . ID=exon-LFV90_02445-1;Parent=rna-LFV90_02445;anticodon=(pos:66964..66966);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=LFV90_02445;product=tRNA-Val ##sequence-region DYDR01000005.1 1 341790 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2866300 DYDR01000005.1 tpg region 1 341790 . + . ID=DYDR01000005.1:1..341790;Dbxref=taxon:2866300;collection-date=2001-12-01;country=Madagascar: Toliara;environmental-sample=true;gbkey=Src;isolate=Choog2;isolation-source=Insect;metagenome-source=insect metagenome;metagenomic=true;mol_type=genomic DNA;nat-host=Columbicola hoogstraali DYDR01000005.1 tpg gene 244 390 . + . ID=gene-LFV90_02450;Name=LFV90_02450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_02450 DYDR01000005.1 Protein Homology CDS 244 390 . + 0 ID=cds-HJD61014.1;Parent=gene-LFV90_02450;Dbxref=NCBI_GP:HJD61014.1;Name=HJD61014.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR03777.1;locus_tag=LFV90_02450;product=hypothetical protein;protein_id=HJD61014.1;transl_table=11 DYDR01000005.1 tpg gene 722 1261 . + . ID=gene-LFV90_02455;Name=LFV90_02455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_02455 DYDR01000005.1 Protein Homology CDS 722 1261 . + 0 ID=cds-HJD61015.1;Parent=gene-LFV90_02455;Dbxref=NCBI_GP:HJD61015.1;Name=HJD61015.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477562.1;locus_tag=LFV90_02455;product=hypothetical protein;protein_id=HJD61015.1;transl_table=11 DYDR01000005.1 tpg gene 1609 2583 . - . ID=gene-LFV90_02460;Name=LFV90_02460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_02460 DYDR01000005.1 Protein Homology CDS 1609 2583 . - 0 ID=cds-HJD61016.1;Parent=gene-LFV90_02460;Dbxref=NCBI_GP:HJD61016.1;Name=HJD61016.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011271608.1;locus_tag=LFV90_02460;product=Fic family protein;protein_id=HJD61016.1;transl_table=11 DYDR01000005.1 tpg gene 2869 5601 . - . ID=gene-LFV90_02465;Name=secA;gbkey=Gene;gene=secA;gene_biotype=protein_coding;locus_tag=LFV90_02465 DYDR01000005.1 Protein Homology CDS 2869 5601 . - 0 ID=cds-HJD61017.1;Parent=gene-LFV90_02465;Dbxref=NCBI_GP:HJD61017.1;Name=HJD61017.1;gbkey=CDS;gene=secA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012151700.1;locus_tag=LFV90_02465;product=preprotein translocase subunit SecA;protein_id=HJD61017.1;transl_table=11 DYDR01000005.1 tpg gene 5805 6659 . + . ID=gene-LFV90_02470;Name=LFV90_02470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_02470 DYDR01000005.1 Protein Homology CDS 5805 6659 . + 0 ID=cds-HJD61018.1;Parent=gene-LFV90_02470;Dbxref=NCBI_GP:HJD61018.1;Name=HJD61018.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477564.1;locus_tag=LFV90_02470;product=peptidylprolyl isomerase;protein_id=HJD61018.1;transl_table=11 DYDR01000005.1 tpg gene 6829 7041 . + . ID=gene-LFV90_02475;Name=LFV90_02475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_02475 DYDR01000005.1 Protein Homology CDS 6829 7041 . + 0 ID=cds-HJD61019.1;Parent=gene-LFV90_02475;Dbxref=NCBI_GP:HJD61019.1;Name=HJD61019.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004998070.1;locus_tag=LFV90_02475;product=hypothetical protein;protein_id=HJD61019.1;transl_table=11 DYDR01000005.1 tpg gene 7107 7181 . + . ID=gene-LFV90_02480;Name=LFV90_02480;gbkey=Gene;gene_biotype=tRNA;locus_tag=LFV90_02480 DYDR01000005.1 tRNAscan-SE tRNA 7107 7181 . + . ID=rna-LFV90_02480;Parent=gene-LFV90_02480;anticodon=(pos:7139..7141);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=LFV90_02480;product=tRNA-Ala DYDR01000005.1 tRNAscan-SE exon 7107 7181 . + . ID=exon-LFV90_02480-1;Parent=rna-LFV90_02480;anticodon=(pos:7139..7141);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=LFV90_02480;product=tRNA-Ala DYDR01000005.1 tpg gene 7679 7936 . + . ID=gene-LFV90_02485;Name=LFV90_02485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_02485 DYDR01000005.1 Protein Homology CDS 7679 7936 . + 0 ID=cds-HJD61020.1;Parent=gene-LFV90_02485;Dbxref=NCBI_GP:HJD61020.1;Name=HJD61020.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014391616.1;locus_tag=LFV90_02485;product=hypothetical protein;protein_id=HJD61020.1;transl_table=11 DYDR01000005.1 tpg gene 8194 8616 . + . ID=gene-LFV90_02490;Name=LFV90_02490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_02490 DYDR01000005.1 GeneMarkS-2+ CDS 8194 8616 . + 0 ID=cds-HJD61021.1;Parent=gene-LFV90_02490;Dbxref=NCBI_GP:HJD61021.1;Name=HJD61021.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_02490;product=ankyrin repeat domain-containing protein;protein_id=HJD61021.1;transl_table=11 DYDR01000005.1 tpg gene 9197 10360 . + . ID=gene-LFV90_02495;Name=queA;gbkey=Gene;gene=queA;gene_biotype=protein_coding;locus_tag=LFV90_02495 DYDR01000005.1 Protein Homology CDS 9197 10360 . + 0 ID=cds-HJD61022.1;Parent=gene-LFV90_02495;Dbxref=NCBI_GP:HJD61022.1;Name=HJD61022.1;gbkey=CDS;gene=queA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011190672.1;locus_tag=LFV90_02495;product=tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA;protein_id=HJD61022.1;transl_table=11 DYDR01000005.1 tpg gene 10363 11826 . - . ID=gene-LFV90_02500;Name=LFV90_02500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_02500 DYDR01000005.1 Protein Homology CDS 10363 11826 . - 0 ID=cds-HJD61023.1;Parent=gene-LFV90_02500;Dbxref=NCBI_GP:HJD61023.1;Name=HJD61023.1;Note=subunit D of antiporter complex involved in resistance to high concentrations of Na+%2C K+%2C Li+ and/or alkali%3B contains an oxidoreductase domain%3B catalyzes the transfer of electrons from NADH to ubiquinone;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477569.1;locus_tag=LFV90_02500;product=cation:proton antiporter;protein_id=HJD61023.1;transl_table=11 DYDR01000005.1 tpg gene 11844 12248 . - . ID=gene-LFV90_02505;Name=LFV90_02505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_02505 DYDR01000005.1 Protein Homology CDS 11844 12248 . - 0 ID=cds-HJD61024.1;Parent=gene-LFV90_02505;Dbxref=NCBI_GP:HJD61024.1;Name=HJD61024.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017442941.1;locus_tag=LFV90_02505;product=type II toxin-antitoxin system VapC family toxin;protein_id=HJD61024.1;transl_table=11 DYDR01000005.1 tpg gene 12251 12505 . - . ID=gene-LFV90_02510;Name=LFV90_02510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_02510 DYDR01000005.1 Protein Homology CDS 12251 12505 . - 0 ID=cds-HJD61025.1;Parent=gene-LFV90_02510;Dbxref=NCBI_GP:HJD61025.1;Name=HJD61025.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016945705.1;locus_tag=LFV90_02510;product=type II toxin-antitoxin system Phd/YefM family antitoxin;protein_id=HJD61025.1;transl_table=11 DYDR01000005.1 tpg gene 12573 13859 . - . ID=gene-LFV90_02515;Name=LFV90_02515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_02515 DYDR01000005.1 Protein Homology CDS 12573 13859 . - 0 ID=cds-HJD61026.1;Parent=gene-LFV90_02515;Dbxref=NCBI_GP:HJD61026.1;Name=HJD61026.1;Note=subunit D of antiporter complex involved in resistance to high concentrations of Na+%2C K+%2C Li+ and/or alkali%3B contains an oxidoreductase domain%3B catalyzes the transfer of electrons from NADH to ubiquinone;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014412981.1;locus_tag=LFV90_02515;product=cation:proton antiporter;protein_id=HJD61026.1;transl_table=11 DYDR01000005.1 tpg gene 13906 13983 . - . ID=gene-LFV90_02520;Name=LFV90_02520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_02520 DYDR01000005.1 Protein Homology CDS 13906 13983 . - 0 ID=cds-HJD61027.1;Parent=gene-LFV90_02520;Dbxref=NCBI_GP:HJD61027.1;Name=HJD61027.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR03777.1;locus_tag=LFV90_02520;product=palindromic element RPE4 domain-containing protein;protein_id=HJD61027.1;transl_table=11 DYDR01000005.1 tpg gene 14011 14346 . - . ID=gene-LFV90_02525;Name=LFV90_02525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_02525 DYDR01000005.1 Protein Homology CDS 14011 14346 . - 0 ID=cds-HJD61028.1;Parent=gene-LFV90_02525;Dbxref=NCBI_GP:HJD61028.1;Name=HJD61028.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016945571.1;locus_tag=LFV90_02525;product=Na+/H+ antiporter subunit C;protein_id=HJD61028.1;transl_table=11 DYDR01000005.1 tpg gene 14495 15247 . - . ID=gene-LFV90_02530;Name=virB9;gbkey=Gene;gene=virB9;gene_biotype=protein_coding;locus_tag=LFV90_02530 DYDR01000005.1 Protein Homology CDS 14495 15247 . - 0 ID=cds-HJD61029.1;Parent=gene-LFV90_02530;Dbxref=NCBI_GP:HJD61029.1;Name=HJD61029.1;gbkey=CDS;gene=virB9;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012150596.1;locus_tag=LFV90_02530;product=P-type conjugative transfer protein VirB9;protein_id=HJD61029.1;transl_table=11 DYDR01000005.1 tpg gene 15249 15947 . - . ID=gene-LFV90_02535;Name=LFV90_02535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_02535 DYDR01000005.1 Protein Homology CDS 15249 15947 . - 0 ID=cds-HJD61030.1;Parent=gene-LFV90_02535;Dbxref=NCBI_GP:HJD61030.1;Name=HJD61030.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017443174.1;locus_tag=LFV90_02535;product=virB8 family protein;protein_id=HJD61030.1;transl_table=11 DYDR01000005.1 tpg gene 16308 16490 . + . ID=gene-LFV90_02540;Name=LFV90_02540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_02540 DYDR01000005.1 Protein Homology CDS 16308 16490 . + 0 ID=cds-HJD61031.1;Parent=gene-LFV90_02540;Dbxref=NCBI_GP:HJD61031.1;Name=HJD61031.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010423481.1;locus_tag=LFV90_02540;product=DUF2706 domain-containing protein;protein_id=HJD61031.1;transl_table=11 DYDR01000005.1 tpg gene 16544 17263 . + . ID=gene-LFV90_02545;Name=LFV90_02545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_02545 DYDR01000005.1 Protein Homology CDS 16544 17263 . + 0 ID=cds-HJD61032.1;Parent=gene-LFV90_02545;Dbxref=NCBI_GP:HJD61032.1;Name=HJD61032.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477673.1;locus_tag=LFV90_02545;product=virB8 family protein;protein_id=HJD61032.1;transl_table=11 DYDR01000005.1 tpg gene 17250 17735 . + . ID=gene-LFV90_02550;Name=LFV90_02550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_02550 DYDR01000005.1 Protein Homology CDS 17250 17735 . + 0 ID=cds-HJD61033.1;Parent=gene-LFV90_02550;Dbxref=NCBI_GP:HJD61033.1;Name=HJD61033.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004996190.1;locus_tag=LFV90_02550;product=TrbG/VirB9 family P-type conjugative transfer protein;protein_id=HJD61033.1;transl_table=11 DYDR01000005.1 tpg gene 17800 19242 . + . ID=gene-LFV90_02555;Name=LFV90_02555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_02555 DYDR01000005.1 Protein Homology CDS 17800 19242 . + 0 ID=cds-HJD61034.1;Parent=gene-LFV90_02555;Dbxref=NCBI_GP:HJD61034.1;Name=HJD61034.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014273331.1;locus_tag=LFV90_02555;product=hypothetical protein;protein_id=HJD61034.1;transl_table=11 DYDR01000005.1 tpg gene 19239 20243 . + . ID=gene-LFV90_02560;Name=virB11;gbkey=Gene;gene=virB11;gene_biotype=protein_coding;locus_tag=LFV90_02560 DYDR01000005.1 Protein Homology CDS 19239 20243 . + 0 ID=cds-HJD61035.1;Parent=gene-LFV90_02560;Dbxref=NCBI_GP:HJD61035.1;Name=HJD61035.1;gbkey=CDS;gene=virB11;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014273332.1;locus_tag=LFV90_02560;product=P-type DNA transfer ATPase VirB11;protein_id=HJD61035.1;transl_table=11 DYDR01000005.1 tpg gene 20316 22094 . + . ID=gene-LFV90_02565;Name=LFV90_02565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_02565 DYDR01000005.1 Protein Homology CDS 20316 22094 . + 0 ID=cds-HJD61036.1;Parent=gene-LFV90_02565;Dbxref=NCBI_GP:HJD61036.1;Name=HJD61036.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017443180.1;locus_tag=LFV90_02565;product=type IV secretory system conjugative DNA transfer family protein;protein_id=HJD61036.1;transl_table=11 DYDR01000005.1 tpg gene 22157 23587 . + . ID=gene-LFV90_02570;Name=LFV90_02570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_02570 DYDR01000005.1 Protein Homology CDS 22157 23587 . + 0 ID=cds-HJD61037.1;Parent=gene-LFV90_02570;Dbxref=NCBI_GP:HJD61037.1;Name=HJD61037.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014408412.1;locus_tag=LFV90_02570;product=Ppx/GppA family phosphatase;protein_id=HJD61037.1;transl_table=11 DYDR01000005.1 tpg gene 23755 24030 . + . ID=gene-LFV90_02575;Name=LFV90_02575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_02575 DYDR01000005.1 Protein Homology CDS 23755 24030 . + 0 ID=cds-HJD61038.1;Parent=gene-LFV90_02575;Dbxref=NCBI_GP:HJD61038.1;Name=HJD61038.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014410083.1;locus_tag=LFV90_02575;product=antitoxin;protein_id=HJD61038.1;transl_table=11 DYDR01000005.1 tpg gene 24021 24425 . + . ID=gene-LFV90_02580;Name=LFV90_02580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_02580 DYDR01000005.1 Protein Homology CDS 24021 24425 . + 0 ID=cds-HJD61039.1;Parent=gene-LFV90_02580;Dbxref=NCBI_GP:HJD61039.1;Name=HJD61039.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016728116.1;locus_tag=LFV90_02580;product=PIN domain-containing protein;protein_id=HJD61039.1;transl_table=11 DYDR01000005.1 tpg gene 24427 25947 . + . ID=gene-LFV90_02585;Name=LFV90_02585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_02585 DYDR01000005.1 Protein Homology CDS 24427 25947 . + 0 ID=cds-HJD61040.1;Parent=gene-LFV90_02585;Dbxref=NCBI_GP:HJD61040.1;Name=HJD61040.1;Note=subunit D of antiporter complex involved in resistance to high concentrations of Na+%2C K+%2C Li+ and/or alkali%3B contains an oxidoreductase domain%3B catalyzes the transfer of electrons from NADH to ubiquinone;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477681.1;locus_tag=LFV90_02585;product=cation:proton antiporter;protein_id=HJD61040.1;transl_table=11 DYDR01000005.1 tpg pseudogene 25890 26046 . - . ID=gene-LFV90_02590;Name=LFV90_02590;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LFV90_02590;pseudo=true DYDR01000005.1 Protein Homology CDS 25890 26046 . - 0 ID=cds-LFV90_02590;Parent=gene-LFV90_02590;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR03777.1;locus_tag=LFV90_02590;product=palindromic element RPE4 domain-containing protein;pseudo=true;transl_table=11 DYDR01000005.1 tpg gene 26087 28111 . + . ID=gene-LFV90_02595;Name=LFV90_02595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_02595 DYDR01000005.1 Protein Homology CDS 26087 28111 . + 0 ID=cds-HJD61041.1;Parent=gene-LFV90_02595;Dbxref=NCBI_GP:HJD61041.1;Name=HJD61041.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010977032.1;locus_tag=LFV90_02595;product=S9 family peptidase;protein_id=HJD61041.1;transl_table=11 DYDR01000005.1 tpg pseudogene 28341 29018 . + . ID=gene-LFV90_02600;Name=LFV90_02600;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LFV90_02600;pseudo=true DYDR01000005.1 Protein Homology CDS 28341 29018 . + 0 ID=cds-LFV90_02600;Parent=gene-LFV90_02600;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477684.1;locus_tag=LFV90_02600;product=ankyrin repeat domain-containing protein;pseudo=true;transl_table=11 DYDR01000005.1 tpg gene 29011 30117 . + . ID=gene-LFV90_02605;Name=rodA;gbkey=Gene;gene=rodA;gene_biotype=protein_coding;locus_tag=LFV90_02605 DYDR01000005.1 Protein Homology CDS 29011 30117 . + 0 ID=cds-HJD61042.1;Parent=gene-LFV90_02605;Dbxref=NCBI_GP:HJD61042.1;Name=HJD61042.1;gbkey=CDS;gene=rodA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477685.1;locus_tag=LFV90_02605;product=rod shape-determining protein RodA;protein_id=HJD61042.1;transl_table=11 DYDR01000005.1 tpg gene 30209 31168 . - . ID=gene-LFV90_02610;Name=LFV90_02610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_02610 DYDR01000005.1 Protein Homology CDS 30209 31168 . - 0 ID=cds-HJD61043.1;Parent=gene-LFV90_02610;Dbxref=NCBI_GP:HJD61043.1;Name=HJD61043.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017442428.1;locus_tag=LFV90_02610;product=magnesium transporter CorA family protein;protein_id=HJD61043.1;transl_table=11 DYDR01000005.1 tpg gene 31881 32582 . + . ID=gene-LFV90_02615;Name=LFV90_02615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_02615 DYDR01000005.1 Protein Homology CDS 31881 32582 . + 0 ID=cds-HJD61044.1;Parent=gene-LFV90_02615;Dbxref=NCBI_GP:HJD61044.1;Name=HJD61044.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014548.2;locus_tag=LFV90_02615;product=Bro-N domain-containing protein;protein_id=HJD61044.1;transl_table=11 DYDR01000005.1 tpg gene 32811 33641 . - . ID=gene-LFV90_02620;Name=LFV90_02620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_02620 DYDR01000005.1 GeneMarkS-2+ CDS 32811 33641 . - 0 ID=cds-HJD61045.1;Parent=gene-LFV90_02620;Dbxref=NCBI_GP:HJD61045.1;Name=HJD61045.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_02620;product=hypothetical protein;protein_id=HJD61045.1;transl_table=11 DYDR01000005.1 tpg gene 33750 34385 . - . ID=gene-LFV90_02625;Name=LFV90_02625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_02625 DYDR01000005.1 GeneMarkS-2+ CDS 33750 34385 . - 0 ID=cds-HJD61046.1;Parent=gene-LFV90_02625;Dbxref=NCBI_GP:HJD61046.1;Name=HJD61046.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_02625;product=hypothetical protein;protein_id=HJD61046.1;transl_table=11 DYDR01000005.1 tpg gene 34804 35400 . - . ID=gene-LFV90_02630;Name=LFV90_02630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_02630 DYDR01000005.1 GeneMarkS-2+ CDS 34804 35400 . - 0 ID=cds-HJD61047.1;Parent=gene-LFV90_02630;Dbxref=NCBI_GP:HJD61047.1;Name=HJD61047.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_02630;product=hypothetical protein;protein_id=HJD61047.1;transl_table=11 DYDR01000005.1 tpg gene 35465 36034 . - . ID=gene-LFV90_02635;Name=LFV90_02635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_02635 DYDR01000005.1 GeneMarkS-2+ CDS 35465 36034 . - 0 ID=cds-HJD61048.1;Parent=gene-LFV90_02635;Dbxref=NCBI_GP:HJD61048.1;Name=HJD61048.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_02635;product=hypothetical protein;protein_id=HJD61048.1;transl_table=11 DYDR01000005.1 tpg gene 36001 36228 . - . ID=gene-LFV90_02640;Name=LFV90_02640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_02640 DYDR01000005.1 GeneMarkS-2+ CDS 36001 36228 . - 0 ID=cds-HJD61049.1;Parent=gene-LFV90_02640;Dbxref=NCBI_GP:HJD61049.1;Name=HJD61049.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_02640;product=hypothetical protein;protein_id=HJD61049.1;transl_table=11 DYDR01000005.1 tpg gene 36949 37024 . - . ID=gene-LFV90_02645;Name=LFV90_02645;gbkey=Gene;gene_biotype=tRNA;locus_tag=LFV90_02645 DYDR01000005.1 tRNAscan-SE tRNA 36949 37024 . - . ID=rna-LFV90_02645;Parent=gene-LFV90_02645;anticodon=(pos:complement(36989..36991));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=LFV90_02645;product=tRNA-Val DYDR01000005.1 tRNAscan-SE exon 36949 37024 . - . ID=exon-LFV90_02645-1;Parent=rna-LFV90_02645;anticodon=(pos:complement(36989..36991));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=LFV90_02645;product=tRNA-Val DYDR01000005.1 tpg gene 37125 37388 . - . ID=gene-LFV90_02650;Name=rpsT;gbkey=Gene;gene=rpsT;gene_biotype=protein_coding;locus_tag=LFV90_02650 DYDR01000005.1 Protein Homology CDS 37125 37388 . - 0 ID=cds-HJD61050.1;Parent=gene-LFV90_02650;Dbxref=NCBI_GP:HJD61050.1;Name=HJD61050.1;gbkey=CDS;gene=rpsT;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477695.1;locus_tag=LFV90_02650;product=30S ribosomal protein S20;protein_id=HJD61050.1;transl_table=11 DYDR01000005.1 tpg gene 37388 37816 . - . ID=gene-LFV90_02655;Name=rplQ;gbkey=Gene;gene=rplQ;gene_biotype=protein_coding;locus_tag=LFV90_02655 DYDR01000005.1 Protein Homology CDS 37388 37816 . - 0 ID=cds-HJD61051.1;Parent=gene-LFV90_02655;Dbxref=NCBI_GP:HJD61051.1;Name=HJD61051.1;gbkey=CDS;gene=rplQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477696.1;locus_tag=LFV90_02655;product=50S ribosomal protein L17;protein_id=HJD61051.1;transl_table=11 DYDR01000005.1 tpg gene 37828 38853 . - . ID=gene-LFV90_02660;Name=LFV90_02660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_02660 DYDR01000005.1 Protein Homology CDS 37828 38853 . - 0 ID=cds-HJD61052.1;Parent=gene-LFV90_02660;Dbxref=NCBI_GP:HJD61052.1;Name=HJD61052.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477697.1;locus_tag=LFV90_02660;product=DNA-directed RNA polymerase subunit alpha;protein_id=HJD61052.1;transl_table=11 DYDR01000005.1 tpg gene 38870 39253 . - . ID=gene-LFV90_02665;Name=rpsK;gbkey=Gene;gene=rpsK;gene_biotype=protein_coding;locus_tag=LFV90_02665 DYDR01000005.1 Protein Homology CDS 38870 39253 . - 0 ID=cds-HJD61053.1;Parent=gene-LFV90_02665;Dbxref=NCBI_GP:HJD61053.1;Name=HJD61053.1;gbkey=CDS;gene=rpsK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003130556.1;locus_tag=LFV90_02665;product=30S ribosomal protein S11;protein_id=HJD61053.1;transl_table=11 DYDR01000005.1 tpg gene 39278 39655 . - . ID=gene-LFV90_02670;Name=rpsM;gbkey=Gene;gene=rpsM;gene_biotype=protein_coding;locus_tag=LFV90_02670 DYDR01000005.1 Protein Homology CDS 39278 39655 . - 0 ID=cds-HJD61054.1;Parent=gene-LFV90_02670;Dbxref=NCBI_GP:HJD61054.1;Name=HJD61054.1;gbkey=CDS;gene=rpsM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012153027.1;locus_tag=LFV90_02670;product=30S ribosomal protein S13;protein_id=HJD61054.1;transl_table=11 DYDR01000005.1 tpg gene 39714 40352 . - . ID=gene-LFV90_02675;Name=LFV90_02675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_02675 DYDR01000005.1 Protein Homology CDS 39714 40352 . - 0 ID=cds-HJD61055.1;Parent=gene-LFV90_02675;Dbxref=NCBI_GP:HJD61055.1;Name=HJD61055.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011191072.1;locus_tag=LFV90_02675;product=adenylate kinase;protein_id=HJD61055.1;transl_table=11 DYDR01000005.1 tpg gene 40366 41667 . - . ID=gene-LFV90_02680;Name=secY;gbkey=Gene;gene=secY;gene_biotype=protein_coding;locus_tag=LFV90_02680 DYDR01000005.1 Protein Homology CDS 40366 41667 . - 0 ID=cds-HJD61056.1;Parent=gene-LFV90_02680;Dbxref=NCBI_GP:HJD61056.1;Name=HJD61056.1;gbkey=CDS;gene=secY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477701.1;locus_tag=LFV90_02680;product=preprotein translocase subunit SecY;protein_id=HJD61056.1;transl_table=11 DYDR01000005.1 tpg gene 41671 42129 . - . ID=gene-LFV90_02685;Name=rplO;gbkey=Gene;gene=rplO;gene_biotype=protein_coding;locus_tag=LFV90_02685 DYDR01000005.1 Protein Homology CDS 41671 42129 . - 0 ID=cds-HJD61057.1;Parent=gene-LFV90_02685;Dbxref=NCBI_GP:HJD61057.1;Name=HJD61057.1;gbkey=CDS;gene=rplO;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011191074.1;locus_tag=LFV90_02685;product=50S ribosomal protein L15;protein_id=HJD61057.1;transl_table=11 DYDR01000005.1 tpg gene 42143 42340 . - . ID=gene-LFV90_02690;Name=rpmD;gbkey=Gene;gene=rpmD;gene_biotype=protein_coding;locus_tag=LFV90_02690 DYDR01000005.1 Protein Homology CDS 42143 42340 . - 0 ID=cds-HJD61058.1;Parent=gene-LFV90_02690;Dbxref=NCBI_GP:HJD61058.1;Name=HJD61058.1;gbkey=CDS;gene=rpmD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477703.1;locus_tag=LFV90_02690;product=50S ribosomal protein L30;protein_id=HJD61058.1;transl_table=11 DYDR01000005.1 tpg gene 42366 42896 . - . ID=gene-LFV90_02695;Name=rpsE;gbkey=Gene;gene=rpsE;gene_biotype=protein_coding;locus_tag=LFV90_02695 DYDR01000005.1 Protein Homology CDS 42366 42896 . - 0 ID=cds-HJD61059.1;Parent=gene-LFV90_02695;Dbxref=NCBI_GP:HJD61059.1;Name=HJD61059.1;gbkey=CDS;gene=rpsE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004596227.1;locus_tag=LFV90_02695;product=30S ribosomal protein S5;protein_id=HJD61059.1;transl_table=11 DYDR01000005.1 tpg gene 42912 43268 . - . ID=gene-LFV90_02700;Name=rplR;gbkey=Gene;gene=rplR;gene_biotype=protein_coding;locus_tag=LFV90_02700 DYDR01000005.1 Protein Homology CDS 42912 43268 . - 0 ID=cds-HJD61060.1;Parent=gene-LFV90_02700;Dbxref=NCBI_GP:HJD61060.1;Name=HJD61060.1;gbkey=CDS;gene=rplR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477705.1;locus_tag=LFV90_02700;product=50S ribosomal protein L18;protein_id=HJD61060.1;transl_table=11 DYDR01000005.1 tpg gene 43283 43816 . - . ID=gene-LFV90_02705;Name=rplF;gbkey=Gene;gene=rplF;gene_biotype=protein_coding;locus_tag=LFV90_02705 DYDR01000005.1 Protein Homology CDS 43283 43816 . - 0 ID=cds-HJD61061.1;Parent=gene-LFV90_02705;Dbxref=NCBI_GP:HJD61061.1;Name=HJD61061.1;gbkey=CDS;gene=rplF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477706.1;locus_tag=LFV90_02705;product=50S ribosomal protein L6;protein_id=HJD61061.1;transl_table=11 DYDR01000005.1 tpg gene 43827 44225 . - . ID=gene-LFV90_02710;Name=rpsH;gbkey=Gene;gene=rpsH;gene_biotype=protein_coding;locus_tag=LFV90_02710 DYDR01000005.1 Protein Homology CDS 43827 44225 . - 0 ID=cds-HJD61062.1;Parent=gene-LFV90_02710;Dbxref=NCBI_GP:HJD61062.1;Name=HJD61062.1;gbkey=CDS;gene=rpsH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012153035.1;locus_tag=LFV90_02710;product=30S ribosomal protein S8;protein_id=HJD61062.1;transl_table=11 DYDR01000005.1 tpg gene 44245 44550 . - . ID=gene-LFV90_02715;Name=rpsN;gbkey=Gene;gene=rpsN;gene_biotype=protein_coding;locus_tag=LFV90_02715 DYDR01000005.1 Protein Homology CDS 44245 44550 . - 0 ID=cds-HJD61063.1;Parent=gene-LFV90_02715;Dbxref=NCBI_GP:HJD61063.1;Name=HJD61063.1;gbkey=CDS;gene=rpsN;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005599304.1;locus_tag=LFV90_02715;product=30S ribosomal protein S14;protein_id=HJD61063.1;transl_table=11 DYDR01000005.1 tpg gene 44565 45104 . - . ID=gene-LFV90_02720;Name=rplE;gbkey=Gene;gene=rplE;gene_biotype=protein_coding;locus_tag=LFV90_02720 DYDR01000005.1 Protein Homology CDS 44565 45104 . - 0 ID=cds-HJD61064.1;Parent=gene-LFV90_02720;Dbxref=NCBI_GP:HJD61064.1;Name=HJD61064.1;gbkey=CDS;gene=rplE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008580949.1;locus_tag=LFV90_02720;product=50S ribosomal protein L5;protein_id=HJD61064.1;transl_table=11 DYDR01000005.1 tpg gene 45104 45433 . - . ID=gene-LFV90_02725;Name=rplX;gbkey=Gene;gene=rplX;gene_biotype=protein_coding;locus_tag=LFV90_02725 DYDR01000005.1 Protein Homology CDS 45104 45433 . - 0 ID=cds-HJD61065.1;Parent=gene-LFV90_02725;Dbxref=NCBI_GP:HJD61065.1;Name=HJD61065.1;gbkey=CDS;gene=rplX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012153038.1;locus_tag=LFV90_02725;product=50S ribosomal protein L24;protein_id=HJD61065.1;transl_table=11 DYDR01000005.1 tpg gene 45434 45802 . - . ID=gene-LFV90_02730;Name=rplN;gbkey=Gene;gene=rplN;gene_biotype=protein_coding;locus_tag=LFV90_02730 DYDR01000005.1 Protein Homology CDS 45434 45802 . - 0 ID=cds-HJD61066.1;Parent=gene-LFV90_02730;Dbxref=NCBI_GP:HJD61066.1;Name=HJD61066.1;gbkey=CDS;gene=rplN;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004145357.1;locus_tag=LFV90_02730;product=50S ribosomal protein L14;protein_id=HJD61066.1;transl_table=11 DYDR01000005.1 tpg gene 45874 46107 . - . ID=gene-LFV90_02735;Name=rpsQ;gbkey=Gene;gene=rpsQ;gene_biotype=protein_coding;locus_tag=LFV90_02735 DYDR01000005.1 Protein Homology CDS 45874 46107 . - 0 ID=cds-HJD61067.1;Parent=gene-LFV90_02735;Dbxref=NCBI_GP:HJD61067.1;Name=HJD61067.1;gbkey=CDS;gene=rpsQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477712.1;locus_tag=LFV90_02735;product=30S ribosomal protein S17;protein_id=HJD61067.1;transl_table=11 DYDR01000005.1 tpg gene 46113 46325 . - . ID=gene-LFV90_02740;Name=rpmC;gbkey=Gene;gene=rpmC;gene_biotype=protein_coding;locus_tag=LFV90_02740 DYDR01000005.1 Protein Homology CDS 46113 46325 . - 0 ID=cds-HJD61068.1;Parent=gene-LFV90_02740;Dbxref=NCBI_GP:HJD61068.1;Name=HJD61068.1;gbkey=CDS;gene=rpmC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477713.1;locus_tag=LFV90_02740;product=50S ribosomal protein L29;protein_id=HJD61068.1;transl_table=11 DYDR01000005.1 tpg gene 46318 46728 . - . ID=gene-LFV90_02745;Name=rplP;gbkey=Gene;gene=rplP;gene_biotype=protein_coding;locus_tag=LFV90_02745 DYDR01000005.1 Protein Homology CDS 46318 46728 . - 0 ID=cds-HJD61069.1;Parent=gene-LFV90_02745;Dbxref=NCBI_GP:HJD61069.1;Name=HJD61069.1;gbkey=CDS;gene=rplP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477714.1;locus_tag=LFV90_02745;product=50S ribosomal protein L16;protein_id=HJD61069.1;transl_table=11 DYDR01000005.1 tpg gene 46744 47397 . - . ID=gene-LFV90_02750;Name=rpsC;gbkey=Gene;gene=rpsC;gene_biotype=protein_coding;locus_tag=LFV90_02750 DYDR01000005.1 Protein Homology CDS 46744 47397 . - 0 ID=cds-HJD61070.1;Parent=gene-LFV90_02750;Dbxref=NCBI_GP:HJD61070.1;Name=HJD61070.1;gbkey=CDS;gene=rpsC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010977584.1;locus_tag=LFV90_02750;product=30S ribosomal protein S3;protein_id=HJD61070.1;transl_table=11 DYDR01000005.1 tpg gene 47399 47758 . - . ID=gene-LFV90_02755;Name=rplV;gbkey=Gene;gene=rplV;gene_biotype=protein_coding;locus_tag=LFV90_02755 DYDR01000005.1 Protein Homology CDS 47399 47758 . - 0 ID=cds-HJD61071.1;Parent=gene-LFV90_02755;Dbxref=NCBI_GP:HJD61071.1;Name=HJD61071.1;gbkey=CDS;gene=rplV;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010977585.1;locus_tag=LFV90_02755;product=50S ribosomal protein L22;protein_id=HJD61071.1;transl_table=11 DYDR01000005.1 tpg gene 47765 48043 . - . ID=gene-LFV90_02760;Name=rpsS;gbkey=Gene;gene=rpsS;gene_biotype=protein_coding;locus_tag=LFV90_02760 DYDR01000005.1 Protein Homology CDS 47765 48043 . - 0 ID=cds-HJD61072.1;Parent=gene-LFV90_02760;Dbxref=NCBI_GP:HJD61072.1;Name=HJD61072.1;gbkey=CDS;gene=rpsS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477717.1;locus_tag=LFV90_02760;product=30S ribosomal protein S19;protein_id=HJD61072.1;transl_table=11 DYDR01000005.1 tpg gene 48070 48891 . - . ID=gene-LFV90_02765;Name=rplB;gbkey=Gene;gene=rplB;gene_biotype=protein_coding;locus_tag=LFV90_02765 DYDR01000005.1 Protein Homology CDS 48070 48891 . - 0 ID=cds-HJD61073.1;Parent=gene-LFV90_02765;Dbxref=NCBI_GP:HJD61073.1;Name=HJD61073.1;gbkey=CDS;gene=rplB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017442486.1;locus_tag=LFV90_02765;product=50S ribosomal protein L2;protein_id=HJD61073.1;transl_table=11 DYDR01000005.1 tpg gene 48892 49188 . - . ID=gene-LFV90_02770;Name=rplW;gbkey=Gene;gene=rplW;gene_biotype=protein_coding;locus_tag=LFV90_02770 DYDR01000005.1 Protein Homology CDS 48892 49188 . - 0 ID=cds-HJD61074.1;Parent=gene-LFV90_02770;Dbxref=NCBI_GP:HJD61074.1;Name=HJD61074.1;gbkey=CDS;gene=rplW;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004596201.1;locus_tag=LFV90_02770;product=50S ribosomal protein L23;protein_id=HJD61074.1;transl_table=11 DYDR01000005.1 tpg gene 49185 49808 . - . ID=gene-LFV90_02775;Name=rplD;gbkey=Gene;gene=rplD;gene_biotype=protein_coding;locus_tag=LFV90_02775 DYDR01000005.1 Protein Homology CDS 49185 49808 . - 0 ID=cds-HJD61075.1;Parent=gene-LFV90_02775;Dbxref=NCBI_GP:HJD61075.1;Name=HJD61075.1;gbkey=CDS;gene=rplD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477720.1;locus_tag=LFV90_02775;product=50S ribosomal protein L4;protein_id=HJD61075.1;transl_table=11 DYDR01000005.1 tpg gene 49861 50508 . - . ID=gene-LFV90_02780;Name=rplC;gbkey=Gene;gene=rplC;gene_biotype=protein_coding;locus_tag=LFV90_02780 DYDR01000005.1 Protein Homology CDS 49861 50508 . - 0 ID=cds-HJD61076.1;Parent=gene-LFV90_02780;Dbxref=NCBI_GP:HJD61076.1;Name=HJD61076.1;gbkey=CDS;gene=rplC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477721.1;locus_tag=LFV90_02780;product=50S ribosomal protein L3;protein_id=HJD61076.1;transl_table=11 DYDR01000005.1 tpg gene 50508 50825 . - . ID=gene-LFV90_02785;Name=rpsJ;gbkey=Gene;gene=rpsJ;gene_biotype=protein_coding;locus_tag=LFV90_02785 DYDR01000005.1 Protein Homology CDS 50508 50825 . - 0 ID=cds-HJD61077.1;Parent=gene-LFV90_02785;Dbxref=NCBI_GP:HJD61077.1;Name=HJD61077.1;gbkey=CDS;gene=rpsJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012736947.1;locus_tag=LFV90_02785;product=30S ribosomal protein S10;protein_id=HJD61077.1;transl_table=11 DYDR01000005.1 tpg gene 50917 52104 . - . ID=gene-LFV90_02790;Name=tuf;gbkey=Gene;gene=tuf;gene_biotype=protein_coding;locus_tag=LFV90_02790 DYDR01000005.1 Protein Homology CDS 50917 52104 . - 0 ID=cds-HJD61078.1;Parent=gene-LFV90_02790;Dbxref=NCBI_GP:HJD61078.1;Name=HJD61078.1;gbkey=CDS;gene=tuf;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312930.1;locus_tag=LFV90_02790;product=elongation factor Tu;protein_id=HJD61078.1;transl_table=11 DYDR01000005.1 tpg gene 52194 52267 . - . ID=gene-LFV90_02795;Name=LFV90_02795;gbkey=Gene;gene_biotype=tRNA;locus_tag=LFV90_02795 DYDR01000005.1 tRNAscan-SE tRNA 52194 52267 . - . ID=rna-LFV90_02795;Parent=gene-LFV90_02795;anticodon=(pos:complement(52233..52235));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=LFV90_02795;product=tRNA-Gly DYDR01000005.1 tRNAscan-SE exon 52194 52267 . - . ID=exon-LFV90_02795-1;Parent=rna-LFV90_02795;anticodon=(pos:complement(52233..52235));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=LFV90_02795;product=tRNA-Gly DYDR01000005.1 tpg gene 52387 52472 . - . ID=gene-LFV90_02800;Name=LFV90_02800;gbkey=Gene;gene_biotype=tRNA;locus_tag=LFV90_02800 DYDR01000005.1 tRNAscan-SE tRNA 52387 52472 . - . ID=rna-LFV90_02800;Parent=gene-LFV90_02800;anticodon=(pos:complement(52436..52438));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=LFV90_02800;product=tRNA-Tyr DYDR01000005.1 tRNAscan-SE exon 52387 52472 . - . ID=exon-LFV90_02800-1;Parent=rna-LFV90_02800;anticodon=(pos:complement(52436..52438));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=LFV90_02800;product=tRNA-Tyr DYDR01000005.1 tpg gene 52663 53388 . + . ID=gene-LFV90_02805;Name=rlmB;gbkey=Gene;gene=rlmB;gene_biotype=protein_coding;locus_tag=LFV90_02805 DYDR01000005.1 Protein Homology CDS 52663 53388 . + 0 ID=cds-HJD61079.1;Parent=gene-LFV90_02805;Dbxref=NCBI_GP:HJD61079.1;Name=HJD61079.1;gbkey=CDS;gene=rlmB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477724.1;locus_tag=LFV90_02805;product=23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB;protein_id=HJD61079.1;transl_table=11 DYDR01000005.1 tpg pseudogene 53589 54046 . + . ID=gene-LFV90_02810;Name=LFV90_02810;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LFV90_02810;pseudo=true DYDR01000005.1 Protein Homology CDS 53589 54046 . + 0 ID=cds-LFV90_02810;Parent=gene-LFV90_02810;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012151671.1;locus_tag=LFV90_02810;product=hypothetical protein;pseudo=true;transl_table=11 DYDR01000005.1 tpg gene 54043 55434 . + . ID=gene-LFV90_02815;Name=fumC;gbkey=Gene;gene=fumC;gene_biotype=protein_coding;locus_tag=LFV90_02815 DYDR01000005.1 Protein Homology CDS 54043 55434 . + 0 ID=cds-HJD61080.1;Parent=gene-LFV90_02815;Dbxref=NCBI_GP:HJD61080.1;Name=HJD61080.1;gbkey=CDS;gene=fumC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012151157.1;locus_tag=LFV90_02815;product=class II fumarate hydratase;protein_id=HJD61080.1;transl_table=11 DYDR01000005.1 tpg pseudogene 55531 55605 . + . ID=gene-LFV90_02820;Name=LFV90_02820;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LFV90_02820;pseudo=true DYDR01000005.1 Protein Homology CDS 55531 55605 . + 0 ID=cds-LFV90_02820;Parent=gene-LFV90_02820;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012151158.1;locus_tag=LFV90_02820;product=type II toxin-antitoxin system Phd/YefM family antitoxin;pseudo=true;transl_table=11 DYDR01000005.1 tpg gene 56624 57229 . + . ID=gene-LFV90_02825;Name=LFV90_02825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_02825 DYDR01000005.1 GeneMarkS-2+ CDS 56624 57229 . + 0 ID=cds-HJD61081.1;Parent=gene-LFV90_02825;Dbxref=NCBI_GP:HJD61081.1;Name=HJD61081.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_02825;product=hypothetical protein;protein_id=HJD61081.1;transl_table=11 DYDR01000005.1 tpg gene 57315 58694 . + . ID=gene-LFV90_02830;Name=ftsZ;gbkey=Gene;gene=ftsZ;gene_biotype=protein_coding;locus_tag=LFV90_02830 DYDR01000005.1 Protein Homology CDS 57315 58694 . + 0 ID=cds-HJD61082.1;Parent=gene-LFV90_02830;Dbxref=NCBI_GP:HJD61082.1;Name=HJD61082.1;gbkey=CDS;gene=ftsZ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012151668.1;locus_tag=LFV90_02830;product=cell division protein FtsZ;protein_id=HJD61082.1;transl_table=11 DYDR01000005.1 tpg gene 58964 59446 . + . ID=gene-LFV90_02835;Name=eco;gbkey=Gene;gene=eco;gene_biotype=protein_coding;locus_tag=LFV90_02835 DYDR01000005.1 Protein Homology CDS 58964 59446 . + 0 ID=cds-HJD61083.1;Parent=gene-LFV90_02835;Dbxref=NCBI_GP:HJD61083.1;Name=HJD61083.1;gbkey=CDS;gene=eco;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016917428.1;locus_tag=LFV90_02835;product=serine protease inhibitor ecotin;protein_id=HJD61083.1;transl_table=11 DYDR01000005.1 tpg gene 59937 60191 . - . ID=gene-LFV90_02840;Name=LFV90_02840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_02840 DYDR01000005.1 Protein Homology CDS 59937 60191 . - 0 ID=cds-HJD61084.1;Parent=gene-LFV90_02840;Dbxref=NCBI_GP:HJD61084.1;Name=HJD61084.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024206.2;locus_tag=LFV90_02840;product=ankyrin repeat domain-containing protein;protein_id=HJD61084.1;transl_table=11 DYDR01000005.1 tpg gene 60231 60797 . - . ID=gene-LFV90_02845;Name=LFV90_02845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_02845 DYDR01000005.1 Protein Homology CDS 60231 60797 . - 0 ID=cds-HJD61085.1;Parent=gene-LFV90_02845;Dbxref=NCBI_GP:HJD61085.1;Name=HJD61085.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004997765.1;locus_tag=LFV90_02845;product=NifU family protein;protein_id=HJD61085.1;transl_table=11 DYDR01000005.1 tpg gene 61013 62227 . - . ID=gene-LFV90_02850;Name=LFV90_02850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_02850 DYDR01000005.1 Protein Homology CDS 61013 62227 . - 0 ID=cds-HJD61086.1;Parent=gene-LFV90_02850;Dbxref=NCBI_GP:HJD61086.1;Name=HJD61086.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014412436.1;locus_tag=LFV90_02850;product=MFS transporter;protein_id=HJD61086.1;transl_table=11 DYDR01000005.1 tpg gene 62352 63587 . - . ID=gene-LFV90_02855;Name=LFV90_02855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_02855 DYDR01000005.1 Protein Homology CDS 62352 63587 . - 0 ID=cds-HJD61087.1;Parent=gene-LFV90_02855;Dbxref=NCBI_GP:HJD61087.1;Name=HJD61087.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016945870.1;locus_tag=LFV90_02855;product=DEAD/DEAH box helicase;protein_id=HJD61087.1;transl_table=11 DYDR01000005.1 tpg gene 64006 64218 . - . ID=gene-LFV90_02860;Name=LFV90_02860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_02860 DYDR01000005.1 Protein Homology CDS 64006 64218 . - 0 ID=cds-HJD61088.1;Parent=gene-LFV90_02860;Dbxref=NCBI_GP:HJD61088.1;Name=HJD61088.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004596176.1;locus_tag=LFV90_02860;product=cold-shock protein;protein_id=HJD61088.1;transl_table=11 DYDR01000005.1 tpg gene 64568 64653 . + . ID=gene-LFV90_02865;Name=LFV90_02865;gbkey=Gene;gene_biotype=tRNA;locus_tag=LFV90_02865 DYDR01000005.1 tRNAscan-SE tRNA 64568 64653 . + . ID=rna-LFV90_02865;Parent=gene-LFV90_02865;anticodon=(pos:64601..64603);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=LFV90_02865;product=tRNA-Leu DYDR01000005.1 tRNAscan-SE exon 64568 64653 . + . ID=exon-LFV90_02865-1;Parent=rna-LFV90_02865;anticodon=(pos:64601..64603);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=LFV90_02865;product=tRNA-Leu DYDR01000005.1 tpg gene 64936 65160 . + . ID=gene-LFV90_02870;Name=LFV90_02870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_02870 DYDR01000005.1 GeneMarkS-2+ CDS 64936 65160 . + 0 ID=cds-HJD61089.1;Parent=gene-LFV90_02870;Dbxref=NCBI_GP:HJD61089.1;Name=HJD61089.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_02870;product=hypothetical protein;protein_id=HJD61089.1;transl_table=11 DYDR01000005.1 tpg gene 65648 65815 . - . ID=gene-LFV90_02875;Name=LFV90_02875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_02875 DYDR01000005.1 GeneMarkS-2+ CDS 65648 65815 . - 0 ID=cds-HJD61090.1;Parent=gene-LFV90_02875;Dbxref=NCBI_GP:HJD61090.1;Name=HJD61090.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_02875;product=hypothetical protein;protein_id=HJD61090.1;transl_table=11 DYDR01000005.1 tpg gene 66166 66552 . + . ID=gene-LFV90_02880;Name=LFV90_02880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_02880 DYDR01000005.1 Protein Homology CDS 66166 66552 . + 0 ID=cds-HJD61091.1;Parent=gene-LFV90_02880;Dbxref=NCBI_GP:HJD61091.1;Name=HJD61091.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477740.1;locus_tag=LFV90_02880;product=hypothetical protein;protein_id=HJD61091.1;transl_table=11 DYDR01000005.1 tpg pseudogene 66568 67221 . + . ID=gene-LFV90_02885;Name=LFV90_02885;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LFV90_02885;pseudo=true DYDR01000005.1 Protein Homology CDS 66568 67221 . + 0 ID=cds-LFV90_02885;Parent=gene-LFV90_02885;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004996828.1;locus_tag=LFV90_02885;product=peptide deformylase;pseudo=true;transl_table=11 DYDR01000005.1 tpg gene 67243 67725 . - . ID=gene-LFV90_02890;Name=LFV90_02890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_02890 DYDR01000005.1 Protein Homology CDS 67243 67725 . - 0 ID=cds-HJD61092.1;Parent=gene-LFV90_02890;Dbxref=NCBI_GP:HJD61092.1;Name=HJD61092.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012514.2;locus_tag=LFV90_02890;product=NUDIX hydrolase;protein_id=HJD61092.1;transl_table=11 DYDR01000005.1 tpg gene 67653 68111 . - . ID=gene-LFV90_02895;Name=LFV90_02895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_02895 DYDR01000005.1 GeneMarkS-2+ CDS 67653 68111 . - 0 ID=cds-HJD61093.1;Parent=gene-LFV90_02895;Dbxref=NCBI_GP:HJD61093.1;Name=HJD61093.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_02895;product=hypothetical protein;protein_id=HJD61093.1;transl_table=11 DYDR01000005.1 tpg gene 68258 68470 . - . ID=gene-LFV90_02900;Name=LFV90_02900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_02900 DYDR01000005.1 GeneMarkS-2+ CDS 68258 68470 . - 0 ID=cds-HJD61094.1;Parent=gene-LFV90_02900;Dbxref=NCBI_GP:HJD61094.1;Name=HJD61094.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_02900;product=hypothetical protein;protein_id=HJD61094.1;transl_table=11 DYDR01000005.1 tpg gene 68500 68847 . - . ID=gene-LFV90_02905;Name=LFV90_02905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_02905 DYDR01000005.1 GeneMarkS-2+ CDS 68500 68847 . - 0 ID=cds-HJD61095.1;Parent=gene-LFV90_02905;Dbxref=NCBI_GP:HJD61095.1;Name=HJD61095.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_02905;product=class I SAM-dependent methyltransferase;protein_id=HJD61095.1;transl_table=11 DYDR01000005.1 tpg gene 69077 69451 . + . ID=gene-LFV90_02910;Name=LFV90_02910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_02910 DYDR01000005.1 Protein Homology CDS 69077 69451 . + 0 ID=cds-HJD61096.1;Parent=gene-LFV90_02910;Dbxref=NCBI_GP:HJD61096.1;Name=HJD61096.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013152.2;locus_tag=LFV90_02910;product=lysozyme;protein_id=HJD61096.1;transl_table=11 DYDR01000005.1 tpg gene 69607 69846 . + . ID=gene-LFV90_02915;Name=LFV90_02915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_02915 DYDR01000005.1 Protein Homology CDS 69607 69846 . + 0 ID=cds-HJD61097.1;Parent=gene-LFV90_02915;Dbxref=NCBI_GP:HJD61097.1;Name=HJD61097.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477745.1;locus_tag=LFV90_02915;product=hypothetical protein;protein_id=HJD61097.1;transl_table=11 DYDR01000005.1 tpg gene 70180 70434 . - . ID=gene-LFV90_02920;Name=LFV90_02920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_02920 DYDR01000005.1 GeneMarkS-2+ CDS 70180 70434 . - 0 ID=cds-HJD61098.1;Parent=gene-LFV90_02920;Dbxref=NCBI_GP:HJD61098.1;Name=HJD61098.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_02920;product=hypothetical protein;protein_id=HJD61098.1;transl_table=11 DYDR01000005.1 tpg gene 71362 71730 . + . ID=gene-LFV90_02925;Name=LFV90_02925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_02925 DYDR01000005.1 GeneMarkS-2+ CDS 71362 71730 . + 0 ID=cds-HJD61099.1;Parent=gene-LFV90_02925;Dbxref=NCBI_GP:HJD61099.1;Name=HJD61099.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_02925;product=hypothetical protein;protein_id=HJD61099.1;transl_table=11 DYDR01000005.1 tpg pseudogene 71838 73333 . - . ID=gene-LFV90_02930;Name=pbpC;gbkey=Gene;gene=pbpC;gene_biotype=pseudogene;locus_tag=LFV90_02930;pseudo=true DYDR01000005.1 Protein Homology CDS 71838 73333 . - 0 ID=cds-LFV90_02930;Parent=gene-LFV90_02930;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;gene=pbpC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016769943.1;locus_tag=LFV90_02930;product=penicillin-binding protein 1C;pseudo=true;transl_table=11 DYDR01000005.1 tpg gene 73605 73784 . - . ID=gene-LFV90_02935;Name=LFV90_02935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_02935 DYDR01000005.1 Protein Homology CDS 73605 73784 . - 0 ID=cds-HJD61100.1;Parent=gene-LFV90_02935;Dbxref=NCBI_GP:HJD61100.1;Name=HJD61100.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012151659.1;locus_tag=LFV90_02935;product=hypothetical protein;protein_id=HJD61100.1;transl_table=11 DYDR01000005.1 tpg gene 74402 76165 . - . ID=gene-LFV90_02940;Name=LFV90_02940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_02940 DYDR01000005.1 Protein Homology CDS 74402 76165 . - 0 ID=cds-HJD61101.1;Parent=gene-LFV90_02940;Dbxref=NCBI_GP:HJD61101.1;Name=HJD61101.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014413089.1;locus_tag=LFV90_02940;product=ABC transporter ATP-binding protein/permease;protein_id=HJD61101.1;transl_table=11 DYDR01000005.1 tpg gene 76239 76541 . - . ID=gene-LFV90_02945;Name=LFV90_02945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_02945 DYDR01000005.1 Protein Homology CDS 76239 76541 . - 0 ID=cds-HJD61102.1;Parent=gene-LFV90_02945;Dbxref=NCBI_GP:HJD61102.1;Name=HJD61102.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011271370.1;locus_tag=LFV90_02945;product=GIY-YIG nuclease family protein;protein_id=HJD61102.1;transl_table=11 DYDR01000005.1 tpg gene 76795 77109 . - . ID=gene-LFV90_02950;Name=grxC;gbkey=Gene;gene=grxC;gene_biotype=protein_coding;locus_tag=LFV90_02950 DYDR01000005.1 Protein Homology CDS 76795 77109 . - 0 ID=cds-HJD61103.1;Parent=gene-LFV90_02950;Dbxref=NCBI_GP:HJD61103.1;Name=HJD61103.1;gbkey=CDS;gene=grxC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011190665.1;locus_tag=LFV90_02950;product=glutaredoxin 3;protein_id=HJD61103.1;transl_table=11 DYDR01000005.1 tpg gene 77180 79165 . + . ID=gene-LFV90_02955;Name=uvrB;gbkey=Gene;gene=uvrB;gene_biotype=protein_coding;locus_tag=LFV90_02955 DYDR01000005.1 Protein Homology CDS 77180 79165 . + 0 ID=cds-HJD61104.1;Parent=gene-LFV90_02955;Dbxref=NCBI_GP:HJD61104.1;Name=HJD61104.1;gbkey=CDS;gene=uvrB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477753.1;locus_tag=LFV90_02955;product=excinuclease ABC subunit UvrB;protein_id=HJD61104.1;transl_table=11 DYDR01000005.1 tpg gene 79168 80373 . - . ID=gene-LFV90_02960;Name=LFV90_02960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_02960 DYDR01000005.1 Protein Homology CDS 79168 80373 . - 0 ID=cds-HJD61105.1;Parent=gene-LFV90_02960;Dbxref=NCBI_GP:HJD61105.1;Name=HJD61105.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017443325.1;locus_tag=LFV90_02960;product=dicarboxylate/amino acid:cation symporter;protein_id=HJD61105.1;transl_table=11 DYDR01000005.1 tpg gene 80430 80744 . - . ID=gene-LFV90_02965;Name=cutA;gbkey=Gene;gene=cutA;gene_biotype=protein_coding;locus_tag=LFV90_02965 DYDR01000005.1 Protein Homology CDS 80430 80744 . - 0 ID=cds-HJD61106.1;Parent=gene-LFV90_02965;Dbxref=NCBI_GP:HJD61106.1;Name=HJD61106.1;gbkey=CDS;gene=cutA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014365304.1;locus_tag=LFV90_02965;product=divalent cation tolerance protein CutA;protein_id=HJD61106.1;transl_table=11 DYDR01000005.1 tpg gene 80747 81163 . - . ID=gene-LFV90_02970;Name=LFV90_02970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_02970 DYDR01000005.1 Protein Homology CDS 80747 81163 . - 0 ID=cds-HJD61107.1;Parent=gene-LFV90_02970;Dbxref=NCBI_GP:HJD61107.1;Name=HJD61107.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477756.1;locus_tag=LFV90_02970;product=6-pyruvoyl tetrahydropterin synthase family protein;protein_id=HJD61107.1;transl_table=11 DYDR01000005.1 tpg gene 81184 82380 . - . ID=gene-LFV90_02975;Name=odhB;gbkey=Gene;gene=odhB;gene_biotype=protein_coding;locus_tag=LFV90_02975 DYDR01000005.1 Protein Homology CDS 81184 82380 . - 0 ID=cds-HJD61108.1;Parent=gene-LFV90_02975;Dbxref=NCBI_GP:HJD61108.1;Name=HJD61108.1;gbkey=CDS;gene=odhB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011271404.1;locus_tag=LFV90_02975;product=2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase;protein_id=HJD61108.1;transl_table=11 DYDR01000005.1 tpg gene 82659 85436 . - . ID=gene-LFV90_02980;Name=LFV90_02980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_02980 DYDR01000005.1 Protein Homology CDS 82659 85436 . - 0 ID=cds-HJD61109.1;Parent=gene-LFV90_02980;Dbxref=NCBI_GP:HJD61109.1;Name=HJD61109.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF006914.0;locus_tag=LFV90_02980;product=2-oxoglutarate dehydrogenase E1 component;protein_id=HJD61109.1;transl_table=11 DYDR01000005.1 tpg gene 85503 86990 . - . ID=gene-LFV90_02985;Name=LFV90_02985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_02985 DYDR01000005.1 Protein Homology CDS 85503 86990 . - 0 ID=cds-HJD61110.1;Parent=gene-LFV90_02985;Dbxref=NCBI_GP:HJD61110.1;Name=HJD61110.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014411961.1;locus_tag=LFV90_02985;product=carboxypeptidase M32;protein_id=HJD61110.1;transl_table=11 DYDR01000005.1 tpg gene 87056 87358 . - . ID=gene-LFV90_02990;Name=LFV90_02990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_02990 DYDR01000005.1 Protein Homology CDS 87056 87358 . - 0 ID=cds-HJD61111.1;Parent=gene-LFV90_02990;Dbxref=NCBI_GP:HJD61111.1;Name=HJD61111.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011271370.1;locus_tag=LFV90_02990;product=GIY-YIG nuclease family protein;protein_id=HJD61111.1;transl_table=11 DYDR01000005.1 tpg gene 87472 89115 . - . ID=gene-LFV90_02995;Name=recN;gbkey=Gene;gene=recN;gene_biotype=protein_coding;locus_tag=LFV90_02995 DYDR01000005.1 Protein Homology CDS 87472 89115 . - 0 ID=cds-HJD61112.1;Parent=gene-LFV90_02995;Dbxref=NCBI_GP:HJD61112.1;Name=HJD61112.1;gbkey=CDS;gene=recN;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011271400.1;locus_tag=LFV90_02995;product=DNA repair protein RecN;protein_id=HJD61112.1;transl_table=11 DYDR01000005.1 tpg gene 89251 90012 . - . ID=gene-LFV90_03000;Name=LFV90_03000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_03000 DYDR01000005.1 Protein Homology CDS 89251 90012 . - 0 ID=cds-HJD61113.1;Parent=gene-LFV90_03000;Dbxref=NCBI_GP:HJD61113.1;Name=HJD61113.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477761.1;locus_tag=LFV90_03000;product=outer membrane protein assembly factor BamD;protein_id=HJD61113.1;transl_table=11 DYDR01000005.1 tpg gene 90255 90620 . - . ID=gene-LFV90_03005;Name=LFV90_03005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_03005 DYDR01000005.1 Protein Homology CDS 90255 90620 . - 0 ID=cds-HJD61114.1;Parent=gene-LFV90_03005;Dbxref=NCBI_GP:HJD61114.1;Name=HJD61114.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012151654.1;locus_tag=LFV90_03005;product=TrbC/VirB2 family protein;protein_id=HJD61114.1;transl_table=11 DYDR01000005.1 tpg gene 90786 91619 . - . ID=gene-LFV90_03010;Name=LFV90_03010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_03010 DYDR01000005.1 Protein Homology CDS 90786 91619 . - 0 ID=cds-HJD61115.1;Parent=gene-LFV90_03010;Dbxref=NCBI_GP:HJD61115.1;Name=HJD61115.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011271387.1;locus_tag=LFV90_03010;product=cytochrome c oxidase subunit 3;protein_id=HJD61115.1;transl_table=11 DYDR01000005.1 tpg gene 91984 92280 . + . ID=gene-LFV90_03015;Name=LFV90_03015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_03015 DYDR01000005.1 Protein Homology CDS 91984 92280 . + 0 ID=cds-HJD61116.1;Parent=gene-LFV90_03015;Dbxref=NCBI_GP:HJD61116.1;Name=HJD61116.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024579.2;locus_tag=LFV90_03015;product=hypothetical protein;protein_id=HJD61116.1;transl_table=11 DYDR01000005.1 tpg gene 92277 92816 . - . ID=gene-LFV90_03020;Name=LFV90_03020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_03020 DYDR01000005.1 Protein Homology CDS 92277 92816 . - 0 ID=cds-HJD61117.1;Parent=gene-LFV90_03020;Dbxref=NCBI_GP:HJD61117.1;Name=HJD61117.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014362795.1;locus_tag=LFV90_03020;product=demethoxyubiquinone hydroxylase family protein;protein_id=HJD61117.1;transl_table=11 DYDR01000005.1 tpg gene 92803 93000 . - . ID=gene-LFV90_03025;Name=LFV90_03025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_03025 DYDR01000005.1 GeneMarkS-2+ CDS 92803 93000 . - 0 ID=cds-HJD61118.1;Parent=gene-LFV90_03025;Dbxref=NCBI_GP:HJD61118.1;Name=HJD61118.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_03025;product=toxin-antitoxin system subunit antitoxin;protein_id=HJD61118.1;transl_table=11 DYDR01000005.1 tpg gene 92981 93982 . - . ID=gene-LFV90_03030;Name=LFV90_03030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_03030 DYDR01000005.1 Protein Homology CDS 92981 93982 . - 0 ID=cds-HJD61119.1;Parent=gene-LFV90_03030;Dbxref=NCBI_GP:HJD61119.1;Name=HJD61119.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012013459.1;locus_tag=LFV90_03030;product=DNA polymerase III subunit delta;protein_id=HJD61119.1;transl_table=11 DYDR01000005.1 tpg gene 93979 94470 . - . ID=gene-LFV90_03035;Name=LFV90_03035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_03035 DYDR01000005.1 Protein Homology CDS 93979 94470 . - 0 ID=cds-HJD61120.1;Parent=gene-LFV90_03035;Dbxref=NCBI_GP:HJD61120.1;Name=HJD61120.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477766.1;locus_tag=LFV90_03035;product=hypothetical protein;protein_id=HJD61120.1;transl_table=11 DYDR01000005.1 tpg gene 95065 95364 . + . ID=gene-LFV90_03040;Name=LFV90_03040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_03040 DYDR01000005.1 GeneMarkS-2+ CDS 95065 95364 . + 0 ID=cds-HJD61121.1;Parent=gene-LFV90_03040;Dbxref=NCBI_GP:HJD61121.1;Name=HJD61121.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_03040;product=hypothetical protein;protein_id=HJD61121.1;transl_table=11 DYDR01000005.1 tpg gene 95423 95644 . - . ID=gene-LFV90_03045;Name=LFV90_03045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_03045 DYDR01000005.1 GeneMarkS-2+ CDS 95423 95644 . - 0 ID=cds-HJD61122.1;Parent=gene-LFV90_03045;Dbxref=NCBI_GP:HJD61122.1;Name=HJD61122.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_03045;product=hypothetical protein;protein_id=HJD61122.1;transl_table=11 DYDR01000005.1 tpg gene 95726 96142 . - . ID=gene-LFV90_03050;Name=LFV90_03050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_03050 DYDR01000005.1 GeneMarkS-2+ CDS 95726 96142 . - 0 ID=cds-HJD61123.1;Parent=gene-LFV90_03050;Dbxref=NCBI_GP:HJD61123.1;Name=HJD61123.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_03050;product=ankyrin repeat domain-containing protein;protein_id=HJD61123.1;transl_table=11 DYDR01000005.1 tpg gene 96149 96553 . - . ID=gene-LFV90_03055;Name=LFV90_03055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_03055 DYDR01000005.1 GeneMarkS-2+ CDS 96149 96553 . - 0 ID=cds-HJD61124.1;Parent=gene-LFV90_03055;Dbxref=NCBI_GP:HJD61124.1;Name=HJD61124.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_03055;product=hypothetical protein;protein_id=HJD61124.1;transl_table=11 DYDR01000005.1 tpg gene 96968 97279 . - . ID=gene-LFV90_03060;Name=LFV90_03060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_03060 DYDR01000005.1 Protein Homology CDS 96968 97279 . - 0 ID=cds-HJD61125.1;Parent=gene-LFV90_03060;Dbxref=NCBI_GP:HJD61125.1;Name=HJD61125.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477770.1;locus_tag=LFV90_03060;product=hypothetical protein;protein_id=HJD61125.1;transl_table=11 DYDR01000005.1 tpg gene 97417 98910 . - . ID=gene-LFV90_03065;Name=LFV90_03065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_03065 DYDR01000005.1 Protein Homology CDS 97417 98910 . - 0 ID=cds-HJD61126.1;Parent=gene-LFV90_03065;Dbxref=NCBI_GP:HJD61126.1;Name=HJD61126.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004996538.1;locus_tag=LFV90_03065;product=S1C family serine protease;protein_id=HJD61126.1;transl_table=11 DYDR01000005.1 tpg gene 98971 100866 . + . ID=gene-LFV90_03070;Name=dnaK;gbkey=Gene;gene=dnaK;gene_biotype=protein_coding;locus_tag=LFV90_03070 DYDR01000005.1 Protein Homology CDS 98971 100866 . + 0 ID=cds-HJD61127.1;Parent=gene-LFV90_03070;Dbxref=NCBI_GP:HJD61127.1;Name=HJD61127.1;gbkey=CDS;gene=dnaK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004595925.1;locus_tag=LFV90_03070;product=molecular chaperone DnaK;protein_id=HJD61127.1;transl_table=11 DYDR01000005.1 tpg gene 101127 102257 . + . ID=gene-LFV90_03075;Name=dnaJ;gbkey=Gene;gene=dnaJ;gene_biotype=protein_coding;locus_tag=LFV90_03075 DYDR01000005.1 Protein Homology CDS 101127 102257 . + 0 ID=cds-HJD61128.1;Parent=gene-LFV90_03075;Dbxref=NCBI_GP:HJD61128.1;Name=HJD61128.1;gbkey=CDS;gene=dnaJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004996543.1;locus_tag=LFV90_03075;product=molecular chaperone DnaJ;protein_id=HJD61128.1;transl_table=11 DYDR01000005.1 tpg gene 102337 102534 . + . ID=gene-LFV90_03080;Name=LFV90_03080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_03080 DYDR01000005.1 Protein Homology CDS 102337 102534 . + 0 ID=cds-HJD61129.1;Parent=gene-LFV90_03080;Dbxref=NCBI_GP:HJD61129.1;Name=HJD61129.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012013452.1;locus_tag=LFV90_03080;product=ChaB family protein;protein_id=HJD61129.1;transl_table=11 DYDR01000005.1 tpg gene 102594 102794 . + . ID=gene-LFV90_03085;Name=LFV90_03085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_03085 DYDR01000005.1 GeneMarkS-2+ CDS 102594 102794 . + 0 ID=cds-HJD61130.1;Parent=gene-LFV90_03085;Dbxref=NCBI_GP:HJD61130.1;Name=HJD61130.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_03085;product=hypothetical protein;protein_id=HJD61130.1;transl_table=11 DYDR01000005.1 tpg gene 103174 103246 . - . ID=gene-LFV90_03090;Name=LFV90_03090;gbkey=Gene;gene_biotype=tRNA;locus_tag=LFV90_03090 DYDR01000005.1 tRNAscan-SE tRNA 103174 103246 . - . ID=rna-LFV90_03090;Parent=gene-LFV90_03090;anticodon=(pos:complement(103211..103213));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=LFV90_03090;product=tRNA-Thr DYDR01000005.1 tRNAscan-SE exon 103174 103246 . - . ID=exon-LFV90_03090-1;Parent=rna-LFV90_03090;anticodon=(pos:complement(103211..103213));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=LFV90_03090;product=tRNA-Thr DYDR01000005.1 tpg gene 103739 106045 . - . ID=gene-LFV90_03095;Name=bamA;gbkey=Gene;gene=bamA;gene_biotype=protein_coding;locus_tag=LFV90_03095 DYDR01000005.1 Protein Homology CDS 103739 106045 . - 0 ID=cds-HJD61131.1;Parent=gene-LFV90_03095;Dbxref=NCBI_GP:HJD61131.1;Name=HJD61131.1;gbkey=CDS;gene=bamA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017443377.1;locus_tag=LFV90_03095;product=outer membrane protein assembly factor BamA;protein_id=HJD61131.1;transl_table=11 DYDR01000005.1 tpg gene 106137 107195 . - . ID=gene-LFV90_03100;Name=rseP;gbkey=Gene;gene=rseP;gene_biotype=protein_coding;locus_tag=LFV90_03100 DYDR01000005.1 Protein Homology CDS 106137 107195 . - 0 ID=cds-HJD61132.1;Parent=gene-LFV90_03100;Dbxref=NCBI_GP:HJD61132.1;Name=HJD61132.1;gbkey=CDS;gene=rseP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017443378.1;locus_tag=LFV90_03100;product=RIP metalloprotease RseP;protein_id=HJD61132.1;transl_table=11 DYDR01000005.1 tpg gene 107405 107875 . + . ID=gene-LFV90_03105;Name=nusB;gbkey=Gene;gene=nusB;gene_biotype=protein_coding;locus_tag=LFV90_03105 DYDR01000005.1 Protein Homology CDS 107405 107875 . + 0 ID=cds-HJD61133.1;Parent=gene-LFV90_03105;Dbxref=NCBI_GP:HJD61133.1;Name=HJD61133.1;gbkey=CDS;gene=nusB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477778.1;locus_tag=LFV90_03105;product=transcription antitermination factor NusB;protein_id=HJD61133.1;transl_table=11 DYDR01000005.1 tpg gene 107865 108548 . + . ID=gene-LFV90_03110;Name=LFV90_03110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_03110 DYDR01000005.1 Protein Homology CDS 107865 108548 . + 0 ID=cds-HJD61134.1;Parent=gene-LFV90_03110;Dbxref=NCBI_GP:HJD61134.1;Name=HJD61134.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477779.1;locus_tag=LFV90_03110;product=RlmE family RNA methyltransferase;protein_id=HJD61134.1;transl_table=11 DYDR01000005.1 tpg gene 108887 109327 . - . ID=gene-LFV90_03115;Name=LFV90_03115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_03115 DYDR01000005.1 Protein Homology CDS 108887 109327 . - 0 ID=cds-HJD61135.1;Parent=gene-LFV90_03115;Dbxref=NCBI_GP:HJD61135.1;Name=HJD61135.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016945467.1;locus_tag=LFV90_03115;product=ubiquinone-binding protein;protein_id=HJD61135.1;transl_table=11 DYDR01000005.1 tpg gene 109423 109629 . - . ID=gene-LFV90_03120;Name=LFV90_03120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_03120 DYDR01000005.1 Protein Homology CDS 109423 109629 . - 0 ID=cds-HJD61136.1;Parent=gene-LFV90_03120;Dbxref=NCBI_GP:HJD61136.1;Name=HJD61136.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004595874.1;locus_tag=LFV90_03120;product=DUF2674 domain-containing protein;protein_id=HJD61136.1;transl_table=11 DYDR01000005.1 tpg gene 109911 110825 . + . ID=gene-LFV90_03125;Name=LFV90_03125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_03125 DYDR01000005.1 Protein Homology CDS 109911 110825 . + 0 ID=cds-HJD61137.1;Parent=gene-LFV90_03125;Dbxref=NCBI_GP:HJD61137.1;Name=HJD61137.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004997612.1;locus_tag=LFV90_03125;product=hypothetical protein;protein_id=HJD61137.1;transl_table=11 DYDR01000005.1 tpg gene 110810 111490 . + . ID=gene-LFV90_03130;Name=LFV90_03130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_03130 DYDR01000005.1 GeneMarkS-2+ CDS 110810 111490 . + 0 ID=cds-HJD61138.1;Parent=gene-LFV90_03130;Dbxref=NCBI_GP:HJD61138.1;Name=HJD61138.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_03130;product=tetratricopeptide repeat protein;protein_id=HJD61138.1;transl_table=11 DYDR01000005.1 tpg gene 111633 112112 . + . ID=gene-LFV90_03135;Name=LFV90_03135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_03135 DYDR01000005.1 GeneMarkS-2+ CDS 111633 112112 . + 0 ID=cds-HJD61139.1;Parent=gene-LFV90_03135;Dbxref=NCBI_GP:HJD61139.1;Name=HJD61139.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_03135;product=hypothetical protein;protein_id=HJD61139.1;transl_table=11 DYDR01000005.1 tpg gene 113604 113789 . - . ID=gene-LFV90_03140;Name=LFV90_03140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_03140 DYDR01000005.1 GeneMarkS-2+ CDS 113604 113789 . - 0 ID=cds-HJD61140.1;Parent=gene-LFV90_03140;Dbxref=NCBI_GP:HJD61140.1;Name=HJD61140.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_03140;product=hypothetical protein;protein_id=HJD61140.1;transl_table=11 DYDR01000005.1 tpg gene 114003 114377 . + . ID=gene-LFV90_03145;Name=LFV90_03145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_03145 DYDR01000005.1 GeneMarkS-2+ CDS 114003 114377 . + 0 ID=cds-HJD61141.1;Parent=gene-LFV90_03145;Dbxref=NCBI_GP:HJD61141.1;Name=HJD61141.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_03145;product=hypothetical protein;protein_id=HJD61141.1;transl_table=11 DYDR01000005.1 tpg gene 114371 114805 . + . ID=gene-LFV90_03150;Name=LFV90_03150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_03150 DYDR01000005.1 GeneMarkS-2+ CDS 114371 114805 . + 0 ID=cds-HJD61142.1;Parent=gene-LFV90_03150;Dbxref=NCBI_GP:HJD61142.1;Name=HJD61142.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_03150;product=hypothetical protein;protein_id=HJD61142.1;transl_table=11 DYDR01000005.1 tpg gene 114809 114985 . - . ID=gene-LFV90_03155;Name=LFV90_03155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_03155 DYDR01000005.1 GeneMarkS-2+ CDS 114809 114985 . - 0 ID=cds-HJD61143.1;Parent=gene-LFV90_03155;Dbxref=NCBI_GP:HJD61143.1;Name=HJD61143.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_03155;product=hypothetical protein;protein_id=HJD61143.1;transl_table=11 DYDR01000005.1 tpg gene 115091 115246 . - . ID=gene-LFV90_03160;Name=LFV90_03160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_03160 DYDR01000005.1 Protein Homology CDS 115091 115246 . - 0 ID=cds-HJD61144.1;Parent=gene-LFV90_03160;Dbxref=NCBI_GP:HJD61144.1;Name=HJD61144.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024835.2;locus_tag=LFV90_03160;product=helix-turn-helix transcriptional regulator;protein_id=HJD61144.1;transl_table=11 DYDR01000005.1 tpg gene 115762 115968 . + . ID=gene-LFV90_03165;Name=LFV90_03165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_03165 DYDR01000005.1 GeneMarkS-2+ CDS 115762 115968 . + 0 ID=cds-HJD61145.1;Parent=gene-LFV90_03165;Dbxref=NCBI_GP:HJD61145.1;Name=HJD61145.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_03165;product=hypothetical protein;protein_id=HJD61145.1;transl_table=11 DYDR01000005.1 tpg gene 116083 117645 . + . ID=gene-LFV90_03170;Name=LFV90_03170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_03170 DYDR01000005.1 Protein Homology CDS 116083 117645 . + 0 ID=cds-HJD61146.1;Parent=gene-LFV90_03170;Dbxref=NCBI_GP:HJD61146.1;Name=HJD61146.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017443375.1;locus_tag=LFV90_03170;product=DHA2 family efflux MFS transporter permease subunit;protein_id=HJD61146.1;transl_table=11 DYDR01000005.1 tpg gene 117629 117949 . + . ID=gene-LFV90_03175;Name=LFV90_03175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_03175 DYDR01000005.1 Protein Homology CDS 117629 117949 . + 0 ID=cds-HJD61147.1;Parent=gene-LFV90_03175;Dbxref=NCBI_GP:HJD61147.1;Name=HJD61147.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF005131.0;locus_tag=LFV90_03175;product=monovalent cation/H+ antiporter subunit E;protein_id=HJD61147.1;transl_table=11 DYDR01000005.1 tpg gene 117946 118686 . + . ID=gene-LFV90_03180;Name=pyrH;gbkey=Gene;gene=pyrH;gene_biotype=protein_coding;locus_tag=LFV90_03180 DYDR01000005.1 Protein Homology CDS 117946 118686 . + 0 ID=cds-HJD61148.1;Parent=gene-LFV90_03180;Dbxref=NCBI_GP:HJD61148.1;Name=HJD61148.1;gbkey=CDS;gene=pyrH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012151637.1;locus_tag=LFV90_03180;product=UMP kinase;protein_id=HJD61148.1;transl_table=11 DYDR01000005.1 tpg gene 118825 119385 . + . ID=gene-LFV90_03185;Name=frr;gbkey=Gene;gene=frr;gene_biotype=protein_coding;locus_tag=LFV90_03185 DYDR01000005.1 Protein Homology CDS 118825 119385 . + 0 ID=cds-HJD61149.1;Parent=gene-LFV90_03185;Dbxref=NCBI_GP:HJD61149.1;Name=HJD61149.1;gbkey=CDS;gene=frr;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010976866.1;locus_tag=LFV90_03185;product=ribosome recycling factor;protein_id=HJD61149.1;transl_table=11 DYDR01000005.1 tpg gene 119551 119853 . + . ID=gene-LFV90_03190;Name=gatC;gbkey=Gene;gene=gatC;gene_biotype=protein_coding;locus_tag=LFV90_03190 DYDR01000005.1 Protein Homology CDS 119551 119853 . + 0 ID=cds-HJD61150.1;Parent=gene-LFV90_03190;Dbxref=NCBI_GP:HJD61150.1;Name=HJD61150.1;gbkey=CDS;gene=gatC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012148306.1;locus_tag=LFV90_03190;product=Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC;protein_id=HJD61150.1;transl_table=11 DYDR01000005.1 tpg gene 119855 121336 . + . ID=gene-LFV90_03195;Name=gatA;gbkey=Gene;gene=gatA;gene_biotype=protein_coding;locus_tag=LFV90_03195 DYDR01000005.1 Protein Homology CDS 119855 121336 . + 0 ID=cds-HJD61151.1;Parent=gene-LFV90_03195;Dbxref=NCBI_GP:HJD61151.1;Name=HJD61151.1;gbkey=CDS;gene=gatA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004597217.1;locus_tag=LFV90_03195;product=Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA;protein_id=HJD61151.1;transl_table=11 DYDR01000005.1 tpg gene 121339 122790 . + . ID=gene-LFV90_03200;Name=gatB;gbkey=Gene;gene=gatB;gene_biotype=protein_coding;locus_tag=LFV90_03200 DYDR01000005.1 Protein Homology CDS 121339 122790 . + 0 ID=cds-HJD61152.1;Parent=gene-LFV90_03200;Dbxref=NCBI_GP:HJD61152.1;Name=HJD61152.1;gbkey=CDS;gene=gatB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011190612.1;locus_tag=LFV90_03200;product=Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB;protein_id=HJD61152.1;transl_table=11 DYDR01000005.1 tpg gene 122914 123639 . + . ID=gene-LFV90_03205;Name=LFV90_03205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_03205 DYDR01000005.1 Protein Homology CDS 122914 123639 . + 0 ID=cds-HJD61153.1;Parent=gene-LFV90_03205;Dbxref=NCBI_GP:HJD61153.1;Name=HJD61153.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014273202.1;locus_tag=LFV90_03205;product=ABC transporter substrate-binding protein;protein_id=HJD61153.1;transl_table=11 DYDR01000005.1 tpg gene 123624 124106 . + . ID=gene-LFV90_03210;Name=LFV90_03210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_03210 DYDR01000005.1 Protein Homology CDS 123624 124106 . + 0 ID=cds-HJD61154.1;Parent=gene-LFV90_03210;Dbxref=NCBI_GP:HJD61154.1;Name=HJD61154.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477796.1;locus_tag=LFV90_03210;product=flavin reductase family protein;protein_id=HJD61154.1;transl_table=11 DYDR01000005.1 tpg gene 124106 124855 . + . ID=gene-LFV90_03215;Name=dapB;gbkey=Gene;gene=dapB;gene_biotype=protein_coding;locus_tag=LFV90_03215 DYDR01000005.1 Protein Homology CDS 124106 124855 . + 0 ID=cds-HJD61155.1;Parent=gene-LFV90_03215;Dbxref=NCBI_GP:HJD61155.1;Name=HJD61155.1;gbkey=CDS;gene=dapB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012013411.1;locus_tag=LFV90_03215;product=4-hydroxy-tetrahydrodipicolinate reductase;protein_id=HJD61155.1;transl_table=11 DYDR01000005.1 tpg gene 124899 125612 . + . ID=gene-LFV90_03220;Name=LFV90_03220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_03220 DYDR01000005.1 Protein Homology CDS 124899 125612 . + 0 ID=cds-HJD61156.1;Parent=gene-LFV90_03220;Dbxref=NCBI_GP:HJD61156.1;Name=HJD61156.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014408234.1;locus_tag=LFV90_03220;product=Bax inhibitor-1/YccA family protein;protein_id=HJD61156.1;transl_table=11 DYDR01000005.1 tpg pseudogene 125744 125869 . - . ID=gene-LFV90_03225;Name=LFV90_03225;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LFV90_03225;pseudo=true DYDR01000005.1 Protein Homology CDS 125744 125869 . - 0 ID=cds-LFV90_03225;Parent=gene-LFV90_03225;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017443384.1;locus_tag=LFV90_03225;product=DUF1674 domain-containing protein;pseudo=true;transl_table=11 DYDR01000005.1 tpg gene 125899 126612 . + . ID=gene-LFV90_03230;Name=LFV90_03230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_03230 DYDR01000005.1 Protein Homology CDS 125899 126612 . + 0 ID=cds-HJD61157.1;Parent=gene-LFV90_03230;Dbxref=NCBI_GP:HJD61157.1;Name=HJD61157.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477800.1;locus_tag=LFV90_03230;product=16S rRNA (uracil(1498)-N(3))-methyltransferase;protein_id=HJD61157.1;transl_table=11 DYDR01000005.1 tpg gene 126747 127388 . - . ID=gene-LFV90_03235;Name=LFV90_03235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_03235 DYDR01000005.1 Protein Homology CDS 126747 127388 . - 0 ID=cds-HJD61158.1;Parent=gene-LFV90_03235;Dbxref=NCBI_GP:HJD61158.1;Name=HJD61158.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004595951.1;locus_tag=LFV90_03235;product=zinc-ribbon domain-containing protein;protein_id=HJD61158.1;transl_table=11 DYDR01000005.1 tpg gene 127461 128288 . + . ID=gene-LFV90_03240;Name=dapD;gbkey=Gene;gene=dapD;gene_biotype=protein_coding;locus_tag=LFV90_03240 DYDR01000005.1 Protein Homology CDS 127461 128288 . + 0 ID=cds-HJD61159.1;Parent=gene-LFV90_03240;Dbxref=NCBI_GP:HJD61159.1;Name=HJD61159.1;gbkey=CDS;gene=dapD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477802.1;locus_tag=LFV90_03240;product=2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxylate N-succinyltransferase;protein_id=HJD61159.1;transl_table=11 DYDR01000005.1 tpg gene 128543 128857 . + . ID=gene-LFV90_03245;Name=LFV90_03245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_03245 DYDR01000005.1 GeneMarkS-2+ CDS 128543 128857 . + 0 ID=cds-HJD61160.1;Parent=gene-LFV90_03245;Dbxref=NCBI_GP:HJD61160.1;Name=HJD61160.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_03245;product=hypothetical protein;protein_id=HJD61160.1;transl_table=11 DYDR01000005.1 tpg gene 128971 130143 . - . ID=gene-LFV90_03250;Name=hemW;gbkey=Gene;gene=hemW;gene_biotype=protein_coding;locus_tag=LFV90_03250 DYDR01000005.1 Protein Homology CDS 128971 130143 . - 0 ID=cds-HJD61161.1;Parent=gene-LFV90_03250;Dbxref=NCBI_GP:HJD61161.1;Name=HJD61161.1;gbkey=CDS;gene=hemW;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004996567.1;locus_tag=LFV90_03250;product=radical SAM family heme chaperone HemW;protein_id=HJD61161.1;transl_table=11 DYDR01000005.1 tpg gene 130923 132272 . - . ID=gene-LFV90_03255;Name=ffh;gbkey=Gene;gene=ffh;gene_biotype=protein_coding;locus_tag=LFV90_03255 DYDR01000005.1 Protein Homology CDS 130923 132272 . - 0 ID=cds-HJD61162.1;Parent=gene-LFV90_03255;Dbxref=NCBI_GP:HJD61162.1;Name=HJD61162.1;gbkey=CDS;gene=ffh;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017443311.1;locus_tag=LFV90_03255;product=signal recognition particle protein;protein_id=HJD61162.1;transl_table=11 DYDR01000005.1 tpg gene 133344 134150 . - . ID=gene-LFV90_03260;Name=LFV90_03260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_03260 DYDR01000005.1 Protein Homology CDS 133344 134150 . - 0 ID=cds-HJD61163.1;Parent=gene-LFV90_03260;Dbxref=NCBI_GP:HJD61163.1;Name=HJD61163.1;Note=catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand%3B the delta' subunit seems to interact with the gamma subunit to transfer the beta subunit on the DNA;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017443310.1;locus_tag=LFV90_03260;product=DNA polymerase III subunit delta';protein_id=HJD61163.1;transl_table=11 DYDR01000005.1 tpg gene 134284 134589 . - . ID=gene-LFV90_03265;Name=LFV90_03265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_03265 DYDR01000005.1 Protein Homology CDS 134284 134589 . - 0 ID=cds-HJD61164.1;Parent=gene-LFV90_03265;Dbxref=NCBI_GP:HJD61164.1;Name=HJD61164.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477808.1;locus_tag=LFV90_03265;product=HU family DNA-binding protein;protein_id=HJD61164.1;transl_table=11 DYDR01000005.1 tpg gene 134906 137932 . + . ID=gene-LFV90_03270;Name=LFV90_03270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_03270 DYDR01000005.1 Protein Homology CDS 134906 137932 . + 0 ID=cds-HJD61165.1;Parent=gene-LFV90_03270;Dbxref=NCBI_GP:HJD61165.1;Name=HJD61165.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011271419.1;locus_tag=LFV90_03270;product=efflux RND transporter permease subunit;protein_id=HJD61165.1;transl_table=11 DYDR01000005.1 tpg gene 138065 138301 . + . ID=gene-LFV90_03275;Name=LFV90_03275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_03275 DYDR01000005.1 Protein Homology CDS 138065 138301 . + 0 ID=cds-HJD61166.1;Parent=gene-LFV90_03275;Dbxref=NCBI_GP:HJD61166.1;Name=HJD61166.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012150427.1;locus_tag=LFV90_03275;product=DUF378 domain-containing protein;protein_id=HJD61166.1;transl_table=11 DYDR01000005.1 tpg gene 138451 142569 . - . ID=gene-LFV90_03280;Name=rpoC;gbkey=Gene;gene=rpoC;gene_biotype=protein_coding;locus_tag=LFV90_03280 DYDR01000005.1 Protein Homology CDS 138451 142569 . - 0 ID=cds-HJD61167.1;Parent=gene-LFV90_03280;Dbxref=NCBI_GP:HJD61167.1;Name=HJD61167.1;gbkey=CDS;gene=rpoC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041808483.1;locus_tag=LFV90_03280;product=DNA-directed RNA polymerase subunit beta';protein_id=HJD61167.1;transl_table=11 DYDR01000005.1 tpg gene 142798 146916 . - . ID=gene-LFV90_03285;Name=rpoB;gbkey=Gene;gene=rpoB;gene_biotype=protein_coding;locus_tag=LFV90_03285 DYDR01000005.1 Protein Homology CDS 142798 146916 . - 0 ID=cds-HJD61168.1;Parent=gene-LFV90_03285;Dbxref=NCBI_GP:HJD61168.1;Name=HJD61168.1;gbkey=CDS;gene=rpoB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477812.1;locus_tag=LFV90_03285;product=DNA-directed RNA polymerase subunit beta;protein_id=HJD61168.1;transl_table=11 DYDR01000005.1 tpg gene 147534 147905 . - . ID=gene-LFV90_03290;Name=rplL;gbkey=Gene;gene=rplL;gene_biotype=protein_coding;locus_tag=LFV90_03290 DYDR01000005.1 Protein Homology CDS 147534 147905 . - 0 ID=cds-HJD61169.1;Parent=gene-LFV90_03290;Dbxref=NCBI_GP:HJD61169.1;Name=HJD61169.1;gbkey=CDS;gene=rplL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004597183.1;locus_tag=LFV90_03290;product=50S ribosomal protein L7/L12;protein_id=HJD61169.1;transl_table=11 DYDR01000005.1 tpg gene 147944 148453 . - . ID=gene-LFV90_03295;Name=rplJ;gbkey=Gene;gene=rplJ;gene_biotype=protein_coding;locus_tag=LFV90_03295 DYDR01000005.1 Protein Homology CDS 147944 148453 . - 0 ID=cds-HJD61170.1;Parent=gene-LFV90_03295;Dbxref=NCBI_GP:HJD61170.1;Name=HJD61170.1;gbkey=CDS;gene=rplJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477814.1;locus_tag=LFV90_03295;product=50S ribosomal protein L10;protein_id=HJD61170.1;transl_table=11 DYDR01000005.1 tpg gene 148705 149424 . - . ID=gene-LFV90_03300;Name=rplA;gbkey=Gene;gene=rplA;gene_biotype=protein_coding;locus_tag=LFV90_03300 DYDR01000005.1 Protein Homology CDS 148705 149424 . - 0 ID=cds-HJD61171.1;Parent=gene-LFV90_03300;Dbxref=NCBI_GP:HJD61171.1;Name=HJD61171.1;gbkey=CDS;gene=rplA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477815.1;locus_tag=LFV90_03300;product=50S ribosomal protein L1;protein_id=HJD61171.1;transl_table=11 DYDR01000005.1 tpg gene 149430 149864 . - . ID=gene-LFV90_03305;Name=rplK;gbkey=Gene;gene=rplK;gene_biotype=protein_coding;locus_tag=LFV90_03305 DYDR01000005.1 Protein Homology CDS 149430 149864 . - 0 ID=cds-HJD61172.1;Parent=gene-LFV90_03305;Dbxref=NCBI_GP:HJD61172.1;Name=HJD61172.1;gbkey=CDS;gene=rplK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477816.1;locus_tag=LFV90_03305;product=50S ribosomal protein L11;protein_id=HJD61172.1;transl_table=11 DYDR01000005.1 tpg gene 149958 150530 . - . ID=gene-LFV90_03310;Name=nusG;gbkey=Gene;gene=nusG;gene_biotype=protein_coding;locus_tag=LFV90_03310 DYDR01000005.1 Protein Homology CDS 149958 150530 . - 0 ID=cds-HJD61173.1;Parent=gene-LFV90_03310;Dbxref=NCBI_GP:HJD61173.1;Name=HJD61173.1;gbkey=CDS;gene=nusG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477817.1;locus_tag=LFV90_03310;product=transcription termination/antitermination protein NusG;protein_id=HJD61173.1;transl_table=11 DYDR01000005.1 tpg gene 150549 150749 . - . ID=gene-LFV90_03315;Name=secE;gbkey=Gene;gene=secE;gene_biotype=protein_coding;locus_tag=LFV90_03315 DYDR01000005.1 Protein Homology CDS 150549 150749 . - 0 ID=cds-HJD61174.1;Parent=gene-LFV90_03315;Dbxref=NCBI_GP:HJD61174.1;Name=HJD61174.1;gbkey=CDS;gene=secE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011190595.1;locus_tag=LFV90_03315;product=preprotein translocase subunit SecE;protein_id=HJD61174.1;transl_table=11 DYDR01000005.1 tpg gene 150791 150866 . - . ID=gene-LFV90_03320;Name=LFV90_03320;gbkey=Gene;gene_biotype=tRNA;locus_tag=LFV90_03320 DYDR01000005.1 tRNAscan-SE tRNA 150791 150866 . - . ID=rna-LFV90_03320;Parent=gene-LFV90_03320;anticodon=(pos:complement(150831..150833));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=LFV90_03320;product=tRNA-Trp DYDR01000005.1 tRNAscan-SE exon 150791 150866 . - . ID=exon-LFV90_03320-1;Parent=rna-LFV90_03320;anticodon=(pos:complement(150831..150833));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=LFV90_03320;product=tRNA-Trp DYDR01000005.1 tpg gene 150966 153059 . - . ID=gene-LFV90_03325;Name=fusA;gbkey=Gene;gene=fusA;gene_biotype=protein_coding;locus_tag=LFV90_03325 DYDR01000005.1 Protein Homology CDS 150966 153059 . - 0 ID=cds-HJD61175.1;Parent=gene-LFV90_03325;Dbxref=NCBI_GP:HJD61175.1;Name=HJD61175.1;gbkey=CDS;gene=fusA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010423925.1;locus_tag=LFV90_03325;product=elongation factor G;protein_id=HJD61175.1;transl_table=11 DYDR01000005.1 tpg gene 153062 153553 . - . ID=gene-LFV90_03330;Name=rpsG;gbkey=Gene;gene=rpsG;gene_biotype=protein_coding;locus_tag=LFV90_03330 DYDR01000005.1 Protein Homology CDS 153062 153553 . - 0 ID=cds-HJD61176.1;Parent=gene-LFV90_03330;Dbxref=NCBI_GP:HJD61176.1;Name=HJD61176.1;gbkey=CDS;gene=rpsG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477820.1;locus_tag=LFV90_03330;product=30S ribosomal protein S7;protein_id=HJD61176.1;transl_table=11 DYDR01000005.1 tpg gene 153579 153968 . - . ID=gene-LFV90_03335;Name=rpsL;gbkey=Gene;gene=rpsL;gene_biotype=protein_coding;locus_tag=LFV90_03335 DYDR01000005.1 Protein Homology CDS 153579 153968 . - 0 ID=cds-HJD61177.1;Parent=gene-LFV90_03335;Dbxref=NCBI_GP:HJD61177.1;Name=HJD61177.1;gbkey=CDS;gene=rpsL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004597174.1;locus_tag=LFV90_03335;product=30S ribosomal protein S12;protein_id=HJD61177.1;transl_table=11 DYDR01000005.1 tpg pseudogene 153993 154119 . + . ID=gene-LFV90_03340;Name=LFV90_03340;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LFV90_03340;pseudo=true DYDR01000005.1 Protein Homology CDS 153993 154119 . + 0 ID=cds-LFV90_03340;Parent=gene-LFV90_03340;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477080.1;locus_tag=LFV90_03340;product=palindromic element RPE5 domain-containing protein;pseudo=true;transl_table=11 DYDR01000005.1 tpg gene 154263 154919 . - . ID=gene-LFV90_03345;Name=LFV90_03345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_03345 DYDR01000005.1 Protein Homology CDS 154263 154919 . - 0 ID=cds-HJD61178.1;Parent=gene-LFV90_03345;Dbxref=NCBI_GP:HJD61178.1;Name=HJD61178.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011190591.1;locus_tag=LFV90_03345;product=amino acid ABC transporter permease;protein_id=HJD61178.1;transl_table=11 DYDR01000005.1 tpg gene 155034 155096 . - . ID=gene-LFV90_03350;Name=LFV90_03350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_03350 DYDR01000005.1 Protein Homology CDS 155034 155096 . - 0 ID=cds-HJD61179.1;Parent=gene-LFV90_03350;Dbxref=NCBI_GP:HJD61179.1;Name=HJD61179.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR03777.1;locus_tag=LFV90_03350;product=palindromic element RPE4 domain-containing protein;protein_id=HJD61179.1;transl_table=11 DYDR01000005.1 tpg gene 155211 157001 . - . ID=gene-LFV90_03355;Name=sdhA;gbkey=Gene;gene=sdhA;gene_biotype=protein_coding;locus_tag=LFV90_03355 DYDR01000005.1 Protein Homology CDS 155211 157001 . - 0 ID=cds-HJD61180.1;Parent=gene-LFV90_03355;Dbxref=NCBI_GP:HJD61180.1;Name=HJD61180.1;gbkey=CDS;gene=sdhA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011190590.1;locus_tag=LFV90_03355;product=succinate dehydrogenase flavoprotein subunit;protein_id=HJD61180.1;transl_table=11 DYDR01000005.1 tpg gene 157162 157539 . - . ID=gene-LFV90_03360;Name=sdhD;gbkey=Gene;gene=sdhD;gene_biotype=protein_coding;locus_tag=LFV90_03360 DYDR01000005.1 Protein Homology CDS 157162 157539 . - 0 ID=cds-HJD61181.1;Parent=gene-LFV90_03360;Dbxref=NCBI_GP:HJD61181.1;Name=HJD61181.1;gbkey=CDS;gene=sdhD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477826.1;locus_tag=LFV90_03360;product=succinate dehydrogenase%2C hydrophobic membrane anchor protein;protein_id=HJD61181.1;transl_table=11 DYDR01000005.1 tpg gene 157792 158169 . - . ID=gene-LFV90_03365;Name=sdhC;gbkey=Gene;gene=sdhC;gene_biotype=protein_coding;locus_tag=LFV90_03365 DYDR01000005.1 Protein Homology CDS 157792 158169 . - 0 ID=cds-HJD61182.1;Parent=gene-LFV90_03365;Dbxref=NCBI_GP:HJD61182.1;Name=HJD61182.1;gbkey=CDS;gene=sdhC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477827.1;locus_tag=LFV90_03365;product=succinate dehydrogenase%2C cytochrome b556 subunit;protein_id=HJD61182.1;transl_table=11 DYDR01000005.1 tpg gene 158322 159068 . - . ID=gene-LFV90_03370;Name=LFV90_03370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_03370 DYDR01000005.1 Protein Homology CDS 158322 159068 . - 0 ID=cds-HJD61183.1;Parent=gene-LFV90_03370;Dbxref=NCBI_GP:HJD61183.1;Name=HJD61183.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012151616.1;locus_tag=LFV90_03370;product=rhodanese domain-containing protein;protein_id=HJD61183.1;transl_table=11 DYDR01000005.1 tpg gene 159247 160791 . - . ID=gene-LFV90_03375;Name=LFV90_03375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_03375 DYDR01000005.1 Protein Homology CDS 159247 160791 . - 0 ID=cds-HJD61184.1;Parent=gene-LFV90_03375;Dbxref=NCBI_GP:HJD61184.1;Name=HJD61184.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477829.1;locus_tag=LFV90_03375;product=Do family serine endopeptidase;protein_id=HJD61184.1;transl_table=11 DYDR01000005.1 tpg gene 160795 161652 . - . ID=gene-LFV90_03380;Name=hflC;gbkey=Gene;gene=hflC;gene_biotype=protein_coding;locus_tag=LFV90_03380 DYDR01000005.1 Protein Homology CDS 160795 161652 . - 0 ID=cds-HJD61185.1;Parent=gene-LFV90_03380;Dbxref=NCBI_GP:HJD61185.1;Name=HJD61185.1;gbkey=CDS;gene=hflC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012152445.1;locus_tag=LFV90_03380;product=protease modulator HflC;protein_id=HJD61185.1;transl_table=11 DYDR01000005.1 tpg gene 161895 162932 . - . ID=gene-LFV90_03385;Name=hflK;gbkey=Gene;gene=hflK;gene_biotype=protein_coding;locus_tag=LFV90_03385 DYDR01000005.1 Protein Homology CDS 161895 162932 . - 0 ID=cds-HJD61186.1;Parent=gene-LFV90_03385;Dbxref=NCBI_GP:HJD61186.1;Name=HJD61186.1;gbkey=CDS;gene=hflK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004996655.1;locus_tag=LFV90_03385;product=FtsH protease activity modulator HflK;protein_id=HJD61186.1;transl_table=11 DYDR01000005.1 tpg gene 163040 163996 . + . ID=gene-LFV90_03390;Name=LFV90_03390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_03390 DYDR01000005.1 Protein Homology CDS 163040 163996 . + 0 ID=cds-HJD61187.1;Parent=gene-LFV90_03390;Dbxref=NCBI_GP:HJD61187.1;Name=HJD61187.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477832.1;locus_tag=LFV90_03390;product=Mrp/NBP35 family ATP-binding protein;protein_id=HJD61187.1;transl_table=11 DYDR01000005.1 tpg gene 163993 165093 . + . ID=gene-LFV90_03395;Name=LFV90_03395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_03395 DYDR01000005.1 Protein Homology CDS 163993 165093 . + 0 ID=cds-HJD61188.1;Parent=gene-LFV90_03395;Dbxref=NCBI_GP:HJD61188.1;Name=HJD61188.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014363573.1;locus_tag=LFV90_03395;product=mitochondrial fission ELM1 family protein;protein_id=HJD61188.1;transl_table=11 DYDR01000005.1 tpg gene 165108 165413 . + . ID=gene-LFV90_03400;Name=LFV90_03400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_03400 DYDR01000005.1 Protein Homology CDS 165108 165413 . + 0 ID=cds-HJD61189.1;Parent=gene-LFV90_03400;Dbxref=NCBI_GP:HJD61189.1;Name=HJD61189.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF037100.2;locus_tag=LFV90_03400;product=nucleotidyltransferase domain-containing protein;protein_id=HJD61189.1;transl_table=11 DYDR01000005.1 tpg gene 165394 165795 . + . ID=gene-LFV90_03405;Name=LFV90_03405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_03405 DYDR01000005.1 Protein Homology CDS 165394 165795 . + 0 ID=cds-HJD61190.1;Parent=gene-LFV90_03405;Dbxref=NCBI_GP:HJD61190.1;Name=HJD61190.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014409893.1;locus_tag=LFV90_03405;product=HI0074 family nucleotidyltransferase substrate-binding subunit;protein_id=HJD61190.1;transl_table=11 DYDR01000005.1 tpg gene 165773 166465 . - . ID=gene-LFV90_03410;Name=LFV90_03410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_03410 DYDR01000005.1 Protein Homology CDS 165773 166465 . - 0 ID=cds-HJD61191.1;Parent=gene-LFV90_03410;Dbxref=NCBI_GP:HJD61191.1;Name=HJD61191.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012150377.1;locus_tag=LFV90_03410;product=RNA methyltransferase;protein_id=HJD61191.1;transl_table=11 DYDR01000005.1 tpg gene 166467 166940 . - . ID=gene-LFV90_03415;Name=ruvC;gbkey=Gene;gene=ruvC;gene_biotype=protein_coding;locus_tag=LFV90_03415 DYDR01000005.1 Protein Homology CDS 166467 166940 . - 0 ID=cds-HJD61192.1;Parent=gene-LFV90_03415;Dbxref=NCBI_GP:HJD61192.1;Name=HJD61192.1;gbkey=CDS;gene=ruvC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004597152.1;locus_tag=LFV90_03415;product=crossover junction endodeoxyribonuclease RuvC;protein_id=HJD61192.1;transl_table=11 DYDR01000005.1 tpg gene 167104 167982 . - . ID=gene-LFV90_03420;Name=era;gbkey=Gene;gene=era;gene_biotype=protein_coding;locus_tag=LFV90_03420 DYDR01000005.1 Protein Homology CDS 167104 167982 . - 0 ID=cds-HJD61193.1;Parent=gene-LFV90_03420;Dbxref=NCBI_GP:HJD61193.1;Name=HJD61193.1;gbkey=CDS;gene=era;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014413205.1;locus_tag=LFV90_03420;product=GTPase Era;protein_id=HJD61193.1;transl_table=11 DYDR01000005.1 tpg gene 167975 168658 . - . ID=gene-LFV90_03425;Name=rnc;gbkey=Gene;gene=rnc;gene_biotype=protein_coding;locus_tag=LFV90_03425 DYDR01000005.1 Protein Homology CDS 167975 168658 . - 0 ID=cds-HJD61194.1;Parent=gene-LFV90_03425;Dbxref=NCBI_GP:HJD61194.1;Name=HJD61194.1;gbkey=CDS;gene=rnc;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012148267.1;locus_tag=LFV90_03425;product=ribonuclease III;protein_id=HJD61194.1;transl_table=11 DYDR01000005.1 tpg gene 168658 169455 . - . ID=gene-LFV90_03430;Name=lepB;gbkey=Gene;gene=lepB;gene_biotype=protein_coding;locus_tag=LFV90_03430 DYDR01000005.1 Protein Homology CDS 168658 169455 . - 0 ID=cds-HJD61195.1;Parent=gene-LFV90_03430;Dbxref=NCBI_GP:HJD61195.1;Name=HJD61195.1;gbkey=CDS;gene=lepB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008581015.1;locus_tag=LFV90_03430;product=signal peptidase I;protein_id=HJD61195.1;transl_table=11 DYDR01000005.1 tpg gene 169681 170937 . - . ID=gene-LFV90_03435;Name=nuoF;gbkey=Gene;gene=nuoF;gene_biotype=protein_coding;locus_tag=LFV90_03435 DYDR01000005.1 Protein Homology CDS 169681 170937 . - 0 ID=cds-HJD61196.1;Parent=gene-LFV90_03435;Dbxref=NCBI_GP:HJD61196.1;Name=HJD61196.1;gbkey=CDS;gene=nuoF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014409887.1;locus_tag=LFV90_03435;product=NADH-quinone oxidoreductase subunit NuoF;protein_id=HJD61196.1;transl_table=11 DYDR01000005.1 tpg gene 171021 171146 . + . ID=gene-LFV90_03440;Name=LFV90_03440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_03440 DYDR01000005.1 Protein Homology CDS 171021 171146 . + 0 ID=cds-HJD61197.1;Parent=gene-LFV90_03440;Dbxref=NCBI_GP:HJD61197.1;Name=HJD61197.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR03777.1;locus_tag=LFV90_03440;product=palindromic element RPE4 domain-containing protein;protein_id=HJD61197.1;transl_table=11 DYDR01000005.1 tpg gene 171109 172023 . - . ID=gene-LFV90_03445;Name=secF;gbkey=Gene;gene=secF;gene_biotype=protein_coding;locus_tag=LFV90_03445 DYDR01000005.1 Protein Homology CDS 171109 172023 . - 0 ID=cds-HJD61198.1;Parent=gene-LFV90_03445;Dbxref=NCBI_GP:HJD61198.1;Name=HJD61198.1;gbkey=CDS;gene=secF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014363568.1;locus_tag=LFV90_03445;product=protein translocase subunit SecF;protein_id=HJD61198.1;transl_table=11 DYDR01000005.1 tpg gene 172095 172331 . + . ID=gene-LFV90_03450;Name=LFV90_03450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_03450 DYDR01000005.1 Protein Homology CDS 172095 172331 . + 0 ID=cds-HJD61199.1;Parent=gene-LFV90_03450;Dbxref=NCBI_GP:HJD61199.1;Name=HJD61199.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004597146.1;locus_tag=LFV90_03450;product=DUF2312 domain-containing protein;protein_id=HJD61199.1;transl_table=11 DYDR01000005.1 tpg gene 172384 173178 . - . ID=gene-LFV90_03455;Name=lpxA;gbkey=Gene;gene=lpxA;gene_biotype=protein_coding;locus_tag=LFV90_03455 DYDR01000005.1 Protein Homology CDS 172384 173178 . - 0 ID=cds-HJD61200.1;Parent=gene-LFV90_03455;Dbxref=NCBI_GP:HJD61200.1;Name=HJD61200.1;gbkey=CDS;gene=lpxA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004596702.1;locus_tag=LFV90_03455;product=acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase;protein_id=HJD61200.1;transl_table=11 DYDR01000005.1 tpg gene 173189 173626 . - . ID=gene-LFV90_03460;Name=fabZ;gbkey=Gene;gene=fabZ;gene_biotype=protein_coding;locus_tag=LFV90_03460 DYDR01000005.1 Protein Homology CDS 173189 173626 . - 0 ID=cds-HJD61201.1;Parent=gene-LFV90_03460;Dbxref=NCBI_GP:HJD61201.1;Name=HJD61201.1;gbkey=CDS;gene=fabZ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477847.1;locus_tag=LFV90_03460;product=3-hydroxyacyl-ACP dehydratase FabZ;protein_id=HJD61201.1;transl_table=11 DYDR01000005.1 tpg gene 173627 174655 . - . ID=gene-LFV90_03465;Name=lpxD;gbkey=Gene;gene=lpxD;gene_biotype=protein_coding;locus_tag=LFV90_03465 DYDR01000005.1 Protein Homology CDS 173627 174655 . - 0 ID=cds-HJD61202.1;Parent=gene-LFV90_03465;Dbxref=NCBI_GP:HJD61202.1;Name=HJD61202.1;gbkey=CDS;gene=lpxD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014363494.1;locus_tag=LFV90_03465;product=UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase;protein_id=HJD61202.1;transl_table=11 DYDR01000005.1 tpg gene 174965 175174 . + . ID=gene-LFV90_03470;Name=LFV90_03470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_03470 DYDR01000005.1 GeneMarkS-2+ CDS 174965 175174 . + 0 ID=cds-HJD61203.1;Parent=gene-LFV90_03470;Dbxref=NCBI_GP:HJD61203.1;Name=HJD61203.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_03470;product=hypothetical protein;protein_id=HJD61203.1;transl_table=11 DYDR01000005.1 tpg gene 175183 176946 . - . ID=gene-LFV90_03475;Name=LFV90_03475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_03475 DYDR01000005.1 Protein Homology CDS 175183 176946 . - 0 ID=cds-HJD61204.1;Parent=gene-LFV90_03475;Dbxref=NCBI_GP:HJD61204.1;Name=HJD61204.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012151602.1;locus_tag=LFV90_03475;product=patatin-like phospholipase family protein;protein_id=HJD61204.1;transl_table=11 DYDR01000005.1 tpg gene 176956 177585 . - . ID=gene-LFV90_03480;Name=LFV90_03480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_03480 DYDR01000005.1 Protein Homology CDS 176956 177585 . - 0 ID=cds-HJD61205.1;Parent=gene-LFV90_03480;Dbxref=NCBI_GP:HJD61205.1;Name=HJD61205.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004599063.1;locus_tag=LFV90_03480;product=superoxide dismutase;protein_id=HJD61205.1;transl_table=11 DYDR01000005.1 tpg gene 178402 179709 . + . ID=gene-LFV90_03485;Name=LFV90_03485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_03485 DYDR01000005.1 Protein Homology CDS 178402 179709 . + 0 ID=cds-HJD61206.1;Parent=gene-LFV90_03485;Dbxref=NCBI_GP:HJD61206.1;Name=HJD61206.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF036939.2;locus_tag=LFV90_03485;product=DUF5460 family protein;protein_id=HJD61206.1;transl_table=11 DYDR01000005.1 tpg gene 179991 180929 . - . ID=gene-LFV90_03490;Name=LFV90_03490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_03490 DYDR01000005.1 Protein Homology CDS 179991 180929 . - 0 ID=cds-HJD61207.1;Parent=gene-LFV90_03490;Dbxref=NCBI_GP:HJD61207.1;Name=HJD61207.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477857.1;locus_tag=LFV90_03490;product=hypothetical protein;protein_id=HJD61207.1;transl_table=11 DYDR01000005.1 tpg gene 180929 181909 . - . ID=gene-LFV90_03495;Name=dusB;gbkey=Gene;gene=dusB;gene_biotype=protein_coding;locus_tag=LFV90_03495 DYDR01000005.1 Protein Homology CDS 180929 181909 . - 0 ID=cds-HJD61208.1;Parent=gene-LFV90_03495;Dbxref=NCBI_GP:HJD61208.1;Name=HJD61208.1;gbkey=CDS;gene=dusB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477858.1;locus_tag=LFV90_03495;product=tRNA dihydrouridine synthase DusB;protein_id=HJD61208.1;transl_table=11 DYDR01000005.1 tpg gene 182301 182376 . + . ID=gene-LFV90_03500;Name=LFV90_03500;gbkey=Gene;gene_biotype=tRNA;locus_tag=LFV90_03500 DYDR01000005.1 tRNAscan-SE tRNA 182301 182376 . + . ID=rna-LFV90_03500;Parent=gene-LFV90_03500;anticodon=(pos:182334..182336);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=LFV90_03500;product=tRNA-Phe DYDR01000005.1 tRNAscan-SE exon 182301 182376 . + . ID=exon-LFV90_03500-1;Parent=rna-LFV90_03500;anticodon=(pos:182334..182336);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=LFV90_03500;product=tRNA-Phe DYDR01000005.1 tpg gene 182636 182896 . + . ID=gene-LFV90_03505;Name=LFV90_03505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_03505 DYDR01000005.1 Protein Homology CDS 182636 182896 . + 0 ID=cds-HJD61209.1;Parent=gene-LFV90_03505;Dbxref=NCBI_GP:HJD61209.1;Name=HJD61209.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024098.2;locus_tag=LFV90_03505;product=DUF3800 domain-containing protein;protein_id=HJD61209.1;transl_table=11 DYDR01000005.1 tpg gene 182905 183234 . + . ID=gene-LFV90_03510;Name=LFV90_03510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_03510 DYDR01000005.1 GeneMarkS-2+ CDS 182905 183234 . + 0 ID=cds-HJD61210.1;Parent=gene-LFV90_03510;Dbxref=NCBI_GP:HJD61210.1;Name=HJD61210.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_03510;product=hypothetical protein;protein_id=HJD61210.1;transl_table=11 DYDR01000005.1 tpg gene 183222 183365 . + . ID=gene-LFV90_03515;Name=LFV90_03515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_03515 DYDR01000005.1 GeneMarkS-2+ CDS 183222 183365 . + 0 ID=cds-HJD61211.1;Parent=gene-LFV90_03515;Dbxref=NCBI_GP:HJD61211.1;Name=HJD61211.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_03515;product=hypothetical protein;protein_id=HJD61211.1;transl_table=11 DYDR01000005.1 tpg gene 183653 183829 . - . ID=gene-LFV90_03520;Name=LFV90_03520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_03520 DYDR01000005.1 Protein Homology CDS 183653 183829 . - 0 ID=cds-HJD61212.1;Parent=gene-LFV90_03520;Dbxref=NCBI_GP:HJD61212.1;Name=HJD61212.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014409764.1;locus_tag=LFV90_03520;product=hypothetical protein;protein_id=HJD61212.1;transl_table=11 DYDR01000005.1 tpg gene 183957 185252 . - . ID=gene-LFV90_03525;Name=LFV90_03525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_03525 DYDR01000005.1 Protein Homology CDS 183957 185252 . - 0 ID=cds-HJD61213.1;Parent=gene-LFV90_03525;Dbxref=NCBI_GP:HJD61213.1;Name=HJD61213.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014412718.1;locus_tag=LFV90_03525;product=bifunctional folylpolyglutamate synthase/dihydrofolate synthase;protein_id=HJD61213.1;transl_table=11 DYDR01000005.1 tpg gene 185446 185997 . - . ID=gene-LFV90_03530;Name=LFV90_03530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_03530 DYDR01000005.1 Protein Homology CDS 185446 185997 . - 0 ID=cds-HJD61214.1;Parent=gene-LFV90_03530;Dbxref=NCBI_GP:HJD61214.1;Name=HJD61214.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012151598.1;locus_tag=LFV90_03530;product=biotin transporter BioY;protein_id=HJD61214.1;transl_table=11 DYDR01000005.1 tpg gene 186124 186792 . - . ID=gene-LFV90_03535;Name=LFV90_03535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_03535 DYDR01000005.1 Protein Homology CDS 186124 186792 . - 0 ID=cds-HJD61215.1;Parent=gene-LFV90_03535;Dbxref=NCBI_GP:HJD61215.1;Name=HJD61215.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017442945.1;locus_tag=LFV90_03535;product=glutathione S-transferase family protein;protein_id=HJD61215.1;transl_table=11 DYDR01000005.1 tpg gene 186852 187371 . - . ID=gene-LFV90_03540;Name=rnpB;gbkey=Gene;gene=rnpB;gene_biotype=RNase_P_RNA;locus_tag=LFV90_03540 DYDR01000005.1 cmsearch RNase_P_RNA 186852 187371 . - . ID=rna-LFV90_03540;Parent=gene-LFV90_03540;Dbxref=RFAM:RF00010;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LFV90_03540;product=RNase P RNA component class A DYDR01000005.1 cmsearch exon 186852 187371 . - . ID=exon-LFV90_03540-1;Parent=rna-LFV90_03540;Dbxref=RFAM:RF00010;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LFV90_03540;product=RNase P RNA component class A DYDR01000005.1 tpg pseudogene 187485 187621 . + . ID=gene-LFV90_03545;Name=LFV90_03545;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LFV90_03545;pseudo=true DYDR01000005.1 Protein Homology CDS 187485 187621 . + 0 ID=cds-LFV90_03545;Parent=gene-LFV90_03545;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004995672.1;locus_tag=LFV90_03545;product=palindromic element RPE1 domain-containing protein;pseudo=true;transl_table=11 DYDR01000005.1 tpg gene 187654 190290 . + . ID=gene-LFV90_03550;Name=ppdK;gbkey=Gene;gene=ppdK;gene_biotype=protein_coding;locus_tag=LFV90_03550 DYDR01000005.1 Protein Homology CDS 187654 190290 . + 0 ID=cds-HJD61216.1;Parent=gene-LFV90_03550;Dbxref=NCBI_GP:HJD61216.1;Name=HJD61216.1;gbkey=CDS;gene=ppdK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017442944.1;locus_tag=LFV90_03550;product=pyruvate%2C phosphate dikinase;protein_id=HJD61216.1;transl_table=11 DYDR01000005.1 tpg gene 190415 193018 . - . ID=gene-LFV90_03555;Name=polA;gbkey=Gene;gene=polA;gene_biotype=protein_coding;locus_tag=LFV90_03555 DYDR01000005.1 Protein Homology CDS 190415 193018 . - 0 ID=cds-HJD61217.1;Parent=gene-LFV90_03555;Dbxref=NCBI_GP:HJD61217.1;Name=HJD61217.1;gbkey=CDS;gene=polA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477866.1;locus_tag=LFV90_03555;product=DNA polymerase I;protein_id=HJD61217.1;transl_table=11 DYDR01000005.1 tpg gene 193156 193293 . - . ID=gene-LFV90_03560;Name=LFV90_03560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_03560 DYDR01000005.1 Protein Homology CDS 193156 193293 . - 0 ID=cds-HJD61218.1;Parent=gene-LFV90_03560;Dbxref=NCBI_GP:HJD61218.1;Name=HJD61218.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR03777.1;locus_tag=LFV90_03560;product=palindromic element RPE4 domain-containing protein;protein_id=HJD61218.1;transl_table=11 DYDR01000005.1 tpg gene 193402 194094 . + . ID=gene-LFV90_03565;Name=LFV90_03565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_03565 DYDR01000005.1 Protein Homology CDS 193402 194094 . + 0 ID=cds-HJD61219.1;Parent=gene-LFV90_03565;Dbxref=NCBI_GP:HJD61219.1;Name=HJD61219.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012151393.1;locus_tag=LFV90_03565;product=heme ABC transporter permease;protein_id=HJD61219.1;transl_table=11 DYDR01000005.1 tpg gene 194099 194422 . + . ID=gene-LFV90_03570;Name=LFV90_03570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_03570 DYDR01000005.1 Protein Homology CDS 194099 194422 . + 0 ID=cds-HJD61220.1;Parent=gene-LFV90_03570;Dbxref=NCBI_GP:HJD61220.1;Name=HJD61220.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477924.1;locus_tag=LFV90_03570;product=ferredoxin family protein;protein_id=HJD61220.1;transl_table=11 DYDR01000005.1 tpg gene 194588 195265 . + . ID=gene-LFV90_03575;Name=LFV90_03575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_03575 DYDR01000005.1 Protein Homology CDS 194588 195265 . + 0 ID=cds-HJD61221.1;Parent=gene-LFV90_03575;Dbxref=NCBI_GP:HJD61221.1;Name=HJD61221.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012736854.1;locus_tag=LFV90_03575;product=porin family protein;protein_id=HJD61221.1;transl_table=11 DYDR01000005.1 tpg gene 195411 196169 . + . ID=gene-LFV90_03580;Name=LFV90_03580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_03580 DYDR01000005.1 Protein Homology CDS 195411 196169 . + 0 ID=cds-HJD61222.1;Parent=gene-LFV90_03580;Dbxref=NCBI_GP:HJD61222.1;Name=HJD61222.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004997220.1;locus_tag=LFV90_03580;product=porin family protein;protein_id=HJD61222.1;transl_table=11 DYDR01000005.1 tpg gene 196489 196629 . + . ID=gene-LFV90_03585;Name=LFV90_03585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_03585 DYDR01000005.1 Protein Homology CDS 196489 196629 . + 0 ID=cds-HJD61223.1;Parent=gene-LFV90_03585;Dbxref=NCBI_GP:HJD61223.1;Name=HJD61223.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR03777.1;locus_tag=LFV90_03585;product=palindromic element RPE4 domain-containing protein;protein_id=HJD61223.1;transl_table=11 DYDR01000005.1 tpg gene 197010 197546 . + . ID=gene-LFV90_03590;Name=LFV90_03590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_03590 DYDR01000005.1 Protein Homology CDS 197010 197546 . + 0 ID=cds-HJD61224.1;Parent=gene-LFV90_03590;Dbxref=NCBI_GP:HJD61224.1;Name=HJD61224.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012151592.1;locus_tag=LFV90_03590;product=hypothetical protein;protein_id=HJD61224.1;transl_table=11 DYDR01000005.1 tpg gene 197521 199311 . + . ID=gene-LFV90_03595;Name=mrdA;gbkey=Gene;gene=mrdA;gene_biotype=protein_coding;locus_tag=LFV90_03595 DYDR01000005.1 Protein Homology CDS 197521 199311 . + 0 ID=cds-HJD61225.1;Parent=gene-LFV90_03595;Dbxref=NCBI_GP:HJD61225.1;Name=HJD61225.1;gbkey=CDS;gene=mrdA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012149779.1;locus_tag=LFV90_03595;product=penicillin-binding protein 2;protein_id=HJD61225.1;transl_table=11 DYDR01000005.1 tpg gene 199806 200729 . + . ID=gene-LFV90_03600;Name=LFV90_03600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_03600 DYDR01000005.1 Protein Homology CDS 199806 200729 . + 0 ID=cds-HJD61226.1;Parent=gene-LFV90_03600;Dbxref=NCBI_GP:HJD61226.1;Name=HJD61226.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477878.1;locus_tag=LFV90_03600;product=hypothetical protein;protein_id=HJD61226.1;transl_table=11 DYDR01000005.1 tpg gene 200945 201373 . - . ID=gene-LFV90_03605;Name=rplS;gbkey=Gene;gene=rplS;gene_biotype=protein_coding;locus_tag=LFV90_03605 DYDR01000005.1 Protein Homology CDS 200945 201373 . - 0 ID=cds-HJD61227.1;Parent=gene-LFV90_03605;Dbxref=NCBI_GP:HJD61227.1;Name=HJD61227.1;gbkey=CDS;gene=rplS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477875.1;locus_tag=LFV90_03605;product=50S ribosomal protein L19;protein_id=HJD61227.1;transl_table=11 DYDR01000005.1 tpg gene 201396 202100 . - . ID=gene-LFV90_03610;Name=trmD;gbkey=Gene;gene=trmD;gene_biotype=protein_coding;locus_tag=LFV90_03610 DYDR01000005.1 Protein Homology CDS 201396 202100 . - 0 ID=cds-HJD61228.1;Parent=gene-LFV90_03610;Dbxref=NCBI_GP:HJD61228.1;Name=HJD61228.1;gbkey=CDS;gene=trmD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017443444.1;locus_tag=LFV90_03610;product=tRNA (guanosine(37)-N1)-methyltransferase TrmD;protein_id=HJD61228.1;transl_table=11 DYDR01000005.1 tpg gene 202197 202358 . - . ID=gene-LFV90_03615;Name=LFV90_03615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_03615 DYDR01000005.1 Protein Homology CDS 202197 202358 . - 0 ID=cds-HJD61229.1;Parent=gene-LFV90_03615;Dbxref=NCBI_GP:HJD61229.1;Name=HJD61229.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014412866.1;locus_tag=LFV90_03615;product=AbrB/MazE/SpoVT family DNA-binding domain-containing protein;protein_id=HJD61229.1;transl_table=11 DYDR01000005.1 tpg pseudogene 202444 203598 . - . ID=gene-LFV90_03620;Name=LFV90_03620;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LFV90_03620;pseudo=true DYDR01000005.1 Protein Homology CDS 202444 203598 . - 0 ID=cds-LFV90_03620;Parent=gene-LFV90_03620;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004597143.1;locus_tag=LFV90_03620;product=acetate/propionate family kinase;pseudo=true;transl_table=11 DYDR01000005.1 tpg pseudogene 203609 204653 . - . ID=gene-LFV90_03625;Name=LFV90_03625;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LFV90_03625;pseudo=true DYDR01000005.1 Protein Homology CDS 203609 204653 . - 0 ID=cds-LFV90_03625;Parent=gene-LFV90_03625;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012151581.1;locus_tag=LFV90_03625;product=phosphate acetyltransferase;pseudo=true;transl_table=11 DYDR01000005.1 tpg gene 205060 205935 . - . ID=gene-LFV90_03630;Name=sucD;gbkey=Gene;gene=sucD;gene_biotype=protein_coding;locus_tag=LFV90_03630 DYDR01000005.1 Protein Homology CDS 205060 205935 . - 0 ID=cds-HJD61230.1;Parent=gene-LFV90_03630;Dbxref=NCBI_GP:HJD61230.1;Name=HJD61230.1;gbkey=CDS;gene=sucD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477883.1;locus_tag=LFV90_03630;product=succinate--CoA ligase subunit alpha;protein_id=HJD61230.1;transl_table=11 DYDR01000005.1 tpg gene 206192 207352 . - . ID=gene-LFV90_03635;Name=sucC;gbkey=Gene;gene=sucC;gene_biotype=protein_coding;locus_tag=LFV90_03635 DYDR01000005.1 Protein Homology CDS 206192 207352 . - 0 ID=cds-HJD61231.1;Parent=gene-LFV90_03635;Dbxref=NCBI_GP:HJD61231.1;Name=HJD61231.1;gbkey=CDS;gene=sucC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012148767.1;locus_tag=LFV90_03635;product=ADP-forming succinate--CoA ligase subunit beta;protein_id=HJD61231.1;transl_table=11 DYDR01000005.1 tpg gene 207394 207813 . - . ID=gene-LFV90_03640;Name=LFV90_03640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_03640 DYDR01000005.1 Protein Homology CDS 207394 207813 . - 0 ID=cds-HJD61232.1;Parent=gene-LFV90_03640;Dbxref=NCBI_GP:HJD61232.1;Name=HJD61232.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012719688.1;locus_tag=LFV90_03640;product=PIN domain-containing protein;protein_id=HJD61232.1;transl_table=11 DYDR01000005.1 tpg gene 207770 208024 . - . ID=gene-LFV90_03645;Name=LFV90_03645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_03645 DYDR01000005.1 Protein Homology CDS 207770 208024 . - 0 ID=cds-HJD61233.1;Parent=gene-LFV90_03645;Dbxref=NCBI_GP:HJD61233.1;Name=HJD61233.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017443055.1;locus_tag=LFV90_03645;product=AbrB/MazE/SpoVT family DNA-binding domain-containing protein;protein_id=HJD61233.1;transl_table=11 DYDR01000005.1 tpg gene 208104 208574 . - . ID=gene-LFV90_03650;Name=LFV90_03650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_03650 DYDR01000005.1 Protein Homology CDS 208104 208574 . - 0 ID=cds-HJD61234.1;Parent=gene-LFV90_03650;Dbxref=NCBI_GP:HJD61234.1;Name=HJD61234.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013460.2;locus_tag=LFV90_03650;product=cytochrome b;protein_id=HJD61234.1;transl_table=11 DYDR01000005.1 tpg gene 208803 210842 . - . ID=gene-LFV90_03655;Name=LFV90_03655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_03655 DYDR01000005.1 Protein Homology CDS 208803 210842 . - 0 ID=cds-HJD61235.1;Parent=gene-LFV90_03655;Dbxref=NCBI_GP:HJD61235.1;Name=HJD61235.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004995742.1;locus_tag=LFV90_03655;product=S9 family peptidase;protein_id=HJD61235.1;transl_table=11 DYDR01000005.1 tpg gene 210966 211601 . - . ID=gene-LFV90_03660;Name=LFV90_03660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_03660 DYDR01000005.1 Protein Homology CDS 210966 211601 . - 0 ID=cds-HJD61236.1;Parent=gene-LFV90_03660;Dbxref=NCBI_GP:HJD61236.1;Name=HJD61236.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004599471.1;locus_tag=LFV90_03660;product=Tim44 domain-containing protein;protein_id=HJD61236.1;transl_table=11 DYDR01000005.1 tpg gene 212007 212378 . - . ID=gene-LFV90_03665;Name=rbfA;gbkey=Gene;gene=rbfA;gene_biotype=protein_coding;locus_tag=LFV90_03665 DYDR01000005.1 Protein Homology CDS 212007 212378 . - 0 ID=cds-HJD61237.1;Parent=gene-LFV90_03665;Dbxref=NCBI_GP:HJD61237.1;Name=HJD61237.1;gbkey=CDS;gene=rbfA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477891.1;locus_tag=LFV90_03665;product=30S ribosome-binding factor RbfA;protein_id=HJD61237.1;transl_table=11 DYDR01000005.1 tpg gene 212386 212811 . - . ID=gene-LFV90_03670;Name=LFV90_03670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_03670 DYDR01000005.1 Protein Homology CDS 212386 212811 . - 0 ID=cds-HJD61238.1;Parent=gene-LFV90_03670;Dbxref=NCBI_GP:HJD61238.1;Name=HJD61238.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477892.1;locus_tag=LFV90_03670;product=DedA family protein;protein_id=HJD61238.1;transl_table=11 DYDR01000005.1 tpg gene 212870 213391 . + . ID=gene-LFV90_03675;Name=LFV90_03675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_03675 DYDR01000005.1 Protein Homology CDS 212870 213391 . + 0 ID=cds-HJD61239.1;Parent=gene-LFV90_03675;Dbxref=NCBI_GP:HJD61239.1;Name=HJD61239.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017443061.1;locus_tag=LFV90_03675;product=RDD family protein;protein_id=HJD61239.1;transl_table=11 DYDR01000005.1 tpg gene 213393 213995 . + . ID=gene-LFV90_03680;Name=recR;gbkey=Gene;gene=recR;gene_biotype=protein_coding;locus_tag=LFV90_03680 DYDR01000005.1 Protein Homology CDS 213393 213995 . + 0 ID=cds-HJD61240.1;Parent=gene-LFV90_03680;Dbxref=NCBI_GP:HJD61240.1;Name=HJD61240.1;gbkey=CDS;gene=recR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041404668.1;locus_tag=LFV90_03680;product=recombination mediator RecR;protein_id=HJD61240.1;transl_table=11 DYDR01000005.1 tpg gene 214686 215570 . - . ID=gene-LFV90_03685;Name=LFV90_03685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_03685 DYDR01000005.1 GeneMarkS-2+ CDS 214686 215570 . - 0 ID=cds-HJD61241.1;Parent=gene-LFV90_03685;Dbxref=NCBI_GP:HJD61241.1;Name=HJD61241.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_03685;product=hypothetical protein;protein_id=HJD61241.1;transl_table=11 DYDR01000005.1 tpg gene 215574 215756 . - . ID=gene-LFV90_03690;Name=LFV90_03690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_03690 DYDR01000005.1 GeneMarkS-2+ CDS 215574 215756 . - 0 ID=cds-HJD61242.1;Parent=gene-LFV90_03690;Dbxref=NCBI_GP:HJD61242.1;Name=HJD61242.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_03690;product=hypothetical protein;protein_id=HJD61242.1;transl_table=11 DYDR01000005.1 tpg gene 215804 216058 . - . ID=gene-LFV90_03695;Name=LFV90_03695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_03695 DYDR01000005.1 GeneMarkS-2+ CDS 215804 216058 . - 0 ID=cds-HJD61243.1;Parent=gene-LFV90_03695;Dbxref=NCBI_GP:HJD61243.1;Name=HJD61243.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_03695;product=hypothetical protein;protein_id=HJD61243.1;transl_table=11 DYDR01000005.1 tpg gene 216513 216983 . + . ID=gene-LFV90_03700;Name=LFV90_03700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_03700 DYDR01000005.1 Protein Homology CDS 216513 216983 . + 0 ID=cds-HJD61244.1;Parent=gene-LFV90_03700;Dbxref=NCBI_GP:HJD61244.1;Name=HJD61244.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013625.2;locus_tag=LFV90_03700;product=peptidoglycan-binding protein;protein_id=HJD61244.1;transl_table=11 DYDR01000005.1 tpg gene 217016 217783 . - . ID=gene-LFV90_03705;Name=LFV90_03705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_03705 DYDR01000005.1 Protein Homology CDS 217016 217783 . - 0 ID=cds-HJD61245.1;Parent=gene-LFV90_03705;Dbxref=NCBI_GP:HJD61245.1;Name=HJD61245.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016926245.1;locus_tag=LFV90_03705;product=NAD kinase;protein_id=HJD61245.1;transl_table=11 DYDR01000005.1 tpg gene 217879 219561 . + . ID=gene-LFV90_03710;Name=LFV90_03710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_03710 DYDR01000005.1 Protein Homology CDS 217879 219561 . + 0 ID=cds-HJD61246.1;Parent=gene-LFV90_03710;Dbxref=NCBI_GP:HJD61246.1;Name=HJD61246.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010977243.1;locus_tag=LFV90_03710;product=ribonuclease J;protein_id=HJD61246.1;transl_table=11 DYDR01000005.1 tpg gene 219716 220504 . - . ID=gene-LFV90_03715;Name=fabI;gbkey=Gene;gene=fabI;gene_biotype=protein_coding;locus_tag=LFV90_03715 DYDR01000005.1 Protein Homology CDS 219716 220504 . - 0 ID=cds-HJD61247.1;Parent=gene-LFV90_03715;Dbxref=NCBI_GP:HJD61247.1;Name=HJD61247.1;gbkey=CDS;gene=fabI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477908.1;locus_tag=LFV90_03715;product=enoyl-ACP reductase FabI;protein_id=HJD61247.1;transl_table=11 DYDR01000005.1 tpg gene 220743 222242 . + . ID=gene-LFV90_03720;Name=lnt;gbkey=Gene;gene=lnt;gene_biotype=protein_coding;locus_tag=LFV90_03720 DYDR01000005.1 Protein Homology CDS 220743 222242 . + 0 ID=cds-HJD61248.1;Parent=gene-LFV90_03720;Dbxref=NCBI_GP:HJD61248.1;Name=HJD61248.1;gbkey=CDS;gene=lnt;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477909.1;locus_tag=LFV90_03720;product=apolipoprotein N-acyltransferase;protein_id=HJD61248.1;transl_table=11 DYDR01000005.1 tpg gene 222366 222662 . + . ID=gene-LFV90_03725;Name=LFV90_03725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_03725 DYDR01000005.1 Protein Homology CDS 222366 222662 . + 0 ID=cds-HJD61249.1;Parent=gene-LFV90_03725;Dbxref=NCBI_GP:HJD61249.1;Name=HJD61249.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024252.2;locus_tag=LFV90_03725;product=helix-turn-helix domain-containing protein;protein_id=HJD61249.1;transl_table=11 DYDR01000005.1 tpg gene 222683 222856 . + . ID=gene-LFV90_03730;Name=LFV90_03730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_03730 DYDR01000005.1 GeneMarkS-2+ CDS 222683 222856 . + 0 ID=cds-HJD61250.1;Parent=gene-LFV90_03730;Dbxref=NCBI_GP:HJD61250.1;Name=HJD61250.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_03730;product=hypothetical protein;protein_id=HJD61250.1;transl_table=11 DYDR01000005.1 tpg gene 223251 224336 . + . ID=gene-LFV90_03735;Name=tgt;gbkey=Gene;gene=tgt;gene_biotype=protein_coding;locus_tag=LFV90_03735 DYDR01000005.1 Protein Homology CDS 223251 224336 . + 0 ID=cds-HJD61251.1;Parent=gene-LFV90_03735;Dbxref=NCBI_GP:HJD61251.1;Name=HJD61251.1;gbkey=CDS;gene=tgt;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012149065.1;locus_tag=LFV90_03735;product=tRNA guanosine(34) transglycosylase Tgt;protein_id=HJD61251.1;transl_table=11 DYDR01000005.1 tpg gene 224472 224630 . + . ID=gene-LFV90_03740;Name=LFV90_03740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_03740 DYDR01000005.1 Protein Homology CDS 224472 224630 . + 0 ID=cds-HJD61252.1;Parent=gene-LFV90_03740;Dbxref=NCBI_GP:HJD61252.1;Name=HJD61252.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014412368.1;locus_tag=LFV90_03740;product=hypothetical protein;protein_id=HJD61252.1;transl_table=11 DYDR01000005.1 tpg gene 224627 225652 . + . ID=gene-LFV90_03745;Name=tsaD;gbkey=Gene;gene=tsaD;gene_biotype=protein_coding;locus_tag=LFV90_03745 DYDR01000005.1 Protein Homology CDS 224627 225652 . + 0 ID=cds-HJD61253.1;Parent=gene-LFV90_03745;Dbxref=NCBI_GP:HJD61253.1;Name=HJD61253.1;gbkey=CDS;gene=tsaD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004596647.1;locus_tag=LFV90_03745;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD;protein_id=HJD61253.1;transl_table=11 DYDR01000005.1 tpg gene 225945 229418 . - . ID=gene-LFV90_03750;Name=LFV90_03750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_03750 DYDR01000005.1 Protein Homology CDS 225945 229418 . - 0 ID=cds-HJD61254.1;Parent=gene-LFV90_03750;Dbxref=NCBI_GP:HJD61254.1;Name=HJD61254.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477914.1;locus_tag=LFV90_03750;product=type IV secretion system protein;protein_id=HJD61254.1;transl_table=11 DYDR01000005.1 tpg gene 229588 232248 . - . ID=gene-LFV90_03755;Name=LFV90_03755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_03755 DYDR01000005.1 Protein Homology CDS 229588 232248 . - 0 ID=cds-HJD61255.1;Parent=gene-LFV90_03755;Dbxref=NCBI_GP:HJD61255.1;Name=HJD61255.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014408200.1;locus_tag=LFV90_03755;product=type IV secretion system protein;protein_id=HJD61255.1;transl_table=11 DYDR01000005.1 tpg gene 232255 235122 . - . ID=gene-LFV90_03760;Name=LFV90_03760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_03760 DYDR01000005.1 Protein Homology CDS 232255 235122 . - 0 ID=cds-HJD61256.1;Parent=gene-LFV90_03760;Dbxref=NCBI_GP:HJD61256.1;Name=HJD61256.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477916.1;locus_tag=LFV90_03760;product=type IV secretion system protein;protein_id=HJD61256.1;transl_table=11 DYDR01000005.1 tpg gene 235129 237159 . - . ID=gene-LFV90_03765;Name=LFV90_03765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_03765 DYDR01000005.1 Protein Homology CDS 235129 237159 . - 0 ID=cds-HJD61257.1;Parent=gene-LFV90_03765;Dbxref=NCBI_GP:HJD61257.1;Name=HJD61257.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477917.1;locus_tag=LFV90_03765;product=type IV secretion system protein;protein_id=HJD61257.1;transl_table=11 DYDR01000005.1 tpg gene 237146 240265 . - . ID=gene-LFV90_03770;Name=LFV90_03770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_03770 DYDR01000005.1 Protein Homology CDS 237146 240265 . - 0 ID=cds-HJD61258.1;Parent=gene-LFV90_03770;Dbxref=NCBI_GP:HJD61258.1;Name=HJD61258.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012151563.1;locus_tag=LFV90_03770;product=type IV secretion system protein;protein_id=HJD61258.1;transl_table=11 DYDR01000005.1 tpg gene 240459 242876 . - . ID=gene-LFV90_03775;Name=LFV90_03775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_03775 DYDR01000005.1 Protein Homology CDS 240459 242876 . - 0 ID=cds-HJD61259.1;Parent=gene-LFV90_03775;Dbxref=NCBI_GP:HJD61259.1;Name=HJD61259.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014391789.1;locus_tag=LFV90_03775;product=VirB4 family type IV secretion/conjugal transfer ATPase;protein_id=HJD61259.1;transl_table=11 DYDR01000005.1 tpg gene 242974 243114 . + . ID=gene-LFV90_03780;Name=LFV90_03780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_03780 DYDR01000005.1 Protein Homology CDS 242974 243114 . + 0 ID=cds-HJD61260.1;Parent=gene-LFV90_03780;Dbxref=NCBI_GP:HJD61260.1;Name=HJD61260.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR03777.1;locus_tag=LFV90_03780;product=palindromic element RPE4 domain-containing protein;protein_id=HJD61260.1;transl_table=11 DYDR01000005.1 tpg gene 243163 243450 . - . ID=gene-LFV90_03785;Name=LFV90_03785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_03785 DYDR01000005.1 Protein Homology CDS 243163 243450 . - 0 ID=cds-HJD61261.1;Parent=gene-LFV90_03785;Dbxref=NCBI_GP:HJD61261.1;Name=HJD61261.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008579695.1;locus_tag=LFV90_03785;product=type IV secretion system protein VirB3;protein_id=HJD61261.1;transl_table=11 DYDR01000005.1 tpg gene 243506 244438 . - . ID=gene-LFV90_03790;Name=LFV90_03790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_03790 DYDR01000005.1 Protein Homology CDS 243506 244438 . - 0 ID=cds-HJD61262.1;Parent=gene-LFV90_03790;Dbxref=NCBI_GP:HJD61262.1;Name=HJD61262.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477927.1;locus_tag=LFV90_03790;product=acetylglutamate kinase;protein_id=HJD61262.1;transl_table=11 DYDR01000005.1 tpg gene 244386 245024 . - . ID=gene-LFV90_03795;Name=yihA;gbkey=Gene;gene=yihA;gene_biotype=protein_coding;locus_tag=LFV90_03795 DYDR01000005.1 Protein Homology CDS 244386 245024 . - 0 ID=cds-HJD61263.1;Parent=gene-LFV90_03795;Dbxref=NCBI_GP:HJD61263.1;Name=HJD61263.1;gbkey=CDS;gene=yihA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477928.1;locus_tag=LFV90_03795;product=ribosome biogenesis GTP-binding protein YihA/YsxC;protein_id=HJD61263.1;transl_table=11 DYDR01000005.1 tpg gene 245294 245370 . - . ID=gene-LFV90_03800;Name=LFV90_03800;gbkey=Gene;gene_biotype=tRNA;locus_tag=LFV90_03800 DYDR01000005.1 tRNAscan-SE tRNA 245294 245370 . - . ID=rna-LFV90_03800;Parent=gene-LFV90_03800;anticodon=(pos:complement(245334..245336));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=LFV90_03800;product=tRNA-Met DYDR01000005.1 tRNAscan-SE exon 245294 245370 . - . ID=exon-LFV90_03800-1;Parent=rna-LFV90_03800;anticodon=(pos:complement(245334..245336));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=LFV90_03800;product=tRNA-Met DYDR01000005.1 tpg gene 245554 245793 . - . ID=gene-LFV90_03805;Name=LFV90_03805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_03805 DYDR01000005.1 Protein Homology CDS 245554 245793 . - 0 ID=cds-HJD61264.1;Parent=gene-LFV90_03805;Dbxref=NCBI_GP:HJD61264.1;Name=HJD61264.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004596473.1;locus_tag=LFV90_03805;product=50S ribosomal protein L31;protein_id=HJD61264.1;transl_table=11 DYDR01000005.1 tpg gene 245790 246083 . - . ID=gene-LFV90_03810;Name=rpmB;gbkey=Gene;gene=rpmB;gene_biotype=protein_coding;locus_tag=LFV90_03810 DYDR01000005.1 Protein Homology CDS 245790 246083 . - 0 ID=cds-HJD61265.1;Parent=gene-LFV90_03810;Dbxref=NCBI_GP:HJD61265.1;Name=HJD61265.1;gbkey=CDS;gene=rpmB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004996729.1;locus_tag=LFV90_03810;product=50S ribosomal protein L28;protein_id=HJD61265.1;transl_table=11 DYDR01000005.1 tpg pseudogene 246231 247142 . - . ID=gene-LFV90_03815;Name=LFV90_03815;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LFV90_03815;pseudo=true DYDR01000005.1 Protein Homology CDS 246231 247142 . - 0 ID=cds-LFV90_03815;Parent=gene-LFV90_03815;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010976791.1;locus_tag=LFV90_03815;product=autotransporter outer membrane beta-barrel domain-containing protein;pseudo=true;transl_table=11 DYDR01000005.1 tpg gene 249136 250515 . + . ID=gene-LFV90_03820;Name=cysS;gbkey=Gene;gene=cysS;gene_biotype=protein_coding;locus_tag=LFV90_03820 DYDR01000005.1 Protein Homology CDS 249136 250515 . + 0 ID=cds-HJD61266.1;Parent=gene-LFV90_03820;Dbxref=NCBI_GP:HJD61266.1;Name=HJD61266.1;gbkey=CDS;gene=cysS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477932.1;locus_tag=LFV90_03820;product=cysteine--tRNA ligase;protein_id=HJD61266.1;transl_table=11 DYDR01000005.1 tpg gene 250802 251677 . + . ID=gene-LFV90_03825;Name=rpsB;gbkey=Gene;gene=rpsB;gene_biotype=protein_coding;locus_tag=LFV90_03825 DYDR01000005.1 Protein Homology CDS 250802 251677 . + 0 ID=cds-HJD61267.1;Parent=gene-LFV90_03825;Dbxref=NCBI_GP:HJD61267.1;Name=HJD61267.1;gbkey=CDS;gene=rpsB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477933.1;locus_tag=LFV90_03825;product=30S ribosomal protein S2;protein_id=HJD61267.1;transl_table=11 DYDR01000005.1 tpg gene 251720 252649 . + . ID=gene-LFV90_03830;Name=tsf;gbkey=Gene;gene=tsf;gene_biotype=protein_coding;locus_tag=LFV90_03830 DYDR01000005.1 Protein Homology CDS 251720 252649 . + 0 ID=cds-HJD61268.1;Parent=gene-LFV90_03830;Dbxref=NCBI_GP:HJD61268.1;Name=HJD61268.1;gbkey=CDS;gene=tsf;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477934.1;locus_tag=LFV90_03830;product=translation elongation factor Ts;protein_id=HJD61268.1;transl_table=11 DYDR01000005.1 tpg gene 253176 253277 . + . ID=gene-LFV90_03835;Name=LFV90_03835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_03835 DYDR01000005.1 Protein Homology CDS 253176 253277 . + 0 ID=cds-HJD61269.1;Parent=gene-LFV90_03835;Dbxref=NCBI_GP:HJD61269.1;Name=HJD61269.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR03776.1;locus_tag=LFV90_03835;product=hypothetical protein;protein_id=HJD61269.1;transl_table=11 DYDR01000005.1 tpg gene 253257 253679 . - . ID=gene-LFV90_03840;Name=tsaE;gbkey=Gene;gene=tsaE;gene_biotype=protein_coding;locus_tag=LFV90_03840 DYDR01000005.1 Protein Homology CDS 253257 253679 . - 0 ID=cds-HJD61270.1;Parent=gene-LFV90_03840;Dbxref=NCBI_GP:HJD61270.1;Name=HJD61270.1;gbkey=CDS;gene=tsaE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011270374.1;locus_tag=LFV90_03840;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE;protein_id=HJD61270.1;transl_table=11 DYDR01000005.1 tpg gene 254030 254566 . - . ID=gene-LFV90_03845;Name=LFV90_03845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_03845 DYDR01000005.1 Protein Homology CDS 254030 254566 . - 0 ID=cds-HJD61271.1;Parent=gene-LFV90_03845;Dbxref=NCBI_GP:HJD61271.1;Name=HJD61271.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014273107.1;locus_tag=LFV90_03845;product=CarD family transcriptional regulator;protein_id=HJD61271.1;transl_table=11 DYDR01000005.1 tpg gene 254753 255475 . + . ID=gene-LFV90_03850;Name=LFV90_03850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_03850 DYDR01000005.1 Protein Homology CDS 254753 255475 . + 0 ID=cds-HJD61272.1;Parent=gene-LFV90_03850;Dbxref=NCBI_GP:HJD61272.1;Name=HJD61272.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014408084.1;locus_tag=LFV90_03850;product=DsbA family protein;protein_id=HJD61272.1;transl_table=11 DYDR01000005.1 tpg gene 255475 255738 . + . ID=gene-LFV90_03855;Name=LFV90_03855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_03855 DYDR01000005.1 Protein Homology CDS 255475 255738 . + 0 ID=cds-HJD61273.1;Parent=gene-LFV90_03855;Dbxref=NCBI_GP:HJD61273.1;Name=HJD61273.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014391724.1;locus_tag=LFV90_03855;product=AtpZ/AtpI family protein;protein_id=HJD61273.1;transl_table=11 DYDR01000005.1 tpg gene 255743 256471 . + . ID=gene-LFV90_03860;Name=LFV90_03860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_03860 DYDR01000005.1 Protein Homology CDS 255743 256471 . + 0 ID=cds-HJD61274.1;Parent=gene-LFV90_03860;Dbxref=NCBI_GP:HJD61274.1;Name=HJD61274.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004596667.1;locus_tag=LFV90_03860;product=F0F1 ATP synthase subunit A;protein_id=HJD61274.1;transl_table=11 DYDR01000005.1 tpg gene 256504 256728 . + . ID=gene-LFV90_03865;Name=LFV90_03865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_03865 DYDR01000005.1 Protein Homology CDS 256504 256728 . + 0 ID=cds-HJD61275.1;Parent=gene-LFV90_03865;Dbxref=NCBI_GP:HJD61275.1;Name=HJD61275.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010420727.1;locus_tag=LFV90_03865;product=F0F1 ATP synthase subunit C;protein_id=HJD61275.1;transl_table=11 DYDR01000005.1 tpg gene 256747 257220 . + . ID=gene-LFV90_03870;Name=LFV90_03870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_03870 DYDR01000005.1 Protein Homology CDS 256747 257220 . + 0 ID=cds-HJD61276.1;Parent=gene-LFV90_03870;Dbxref=NCBI_GP:HJD61276.1;Name=HJD61276.1;Note=Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit B' is part of the membrane proton channel.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017443497.1;locus_tag=LFV90_03870;product=ATP F0F1 synthase subunit B';protein_id=HJD61276.1;transl_table=11 DYDR01000005.1 tpg gene 257223 257696 . + . ID=gene-LFV90_03875;Name=LFV90_03875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_03875 DYDR01000005.1 Protein Homology CDS 257223 257696 . + 0 ID=cds-HJD61277.1;Parent=gene-LFV90_03875;Dbxref=NCBI_GP:HJD61277.1;Name=HJD61277.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477944.1;locus_tag=LFV90_03875;product=F0F1 ATP synthase subunit B;protein_id=HJD61277.1;transl_table=11 DYDR01000005.1 tpg gene 257987 258808 . - . ID=gene-LFV90_03880;Name=queF;gbkey=Gene;gene=queF;gene_biotype=protein_coding;locus_tag=LFV90_03880 DYDR01000005.1 Protein Homology CDS 257987 258808 . - 0 ID=cds-HJD61278.1;Parent=gene-LFV90_03880;Dbxref=NCBI_GP:HJD61278.1;Name=HJD61278.1;Note=Catalyzes the NADPH-dependent reduction of 7-cyano-7-deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) in queuosine biosynthesis;gbkey=CDS;gene=queF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477945.1;locus_tag=LFV90_03880;product=NADPH-dependent 7-cyano-7-deazaguanine reductase QueF;protein_id=HJD61278.1;transl_table=11 DYDR01000005.1 tpg gene 258981 259694 . - . ID=gene-LFV90_03885;Name=LFV90_03885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_03885 DYDR01000005.1 Protein Homology CDS 258981 259694 . - 0 ID=cds-HJD61279.1;Parent=gene-LFV90_03885;Dbxref=NCBI_GP:HJD61279.1;Name=HJD61279.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477946.1;locus_tag=LFV90_03885;product=response regulator transcription factor;protein_id=HJD61279.1;transl_table=11 DYDR01000005.1 tpg gene 259926 260384 . - . ID=gene-LFV90_03890;Name=secB;gbkey=Gene;gene=secB;gene_biotype=protein_coding;locus_tag=LFV90_03890 DYDR01000005.1 Protein Homology CDS 259926 260384 . - 0 ID=cds-HJD61280.1;Parent=gene-LFV90_03890;Dbxref=NCBI_GP:HJD61280.1;Name=HJD61280.1;gbkey=CDS;gene=secB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017443406.1;locus_tag=LFV90_03890;product=protein-export chaperone SecB;protein_id=HJD61280.1;transl_table=11 DYDR01000005.1 tpg gene 260518 261084 . - . ID=gene-LFV90_03895;Name=dcd;gbkey=Gene;gene=dcd;gene_biotype=protein_coding;locus_tag=LFV90_03895 DYDR01000005.1 Protein Homology CDS 260518 261084 . - 0 ID=cds-HJD61281.1;Parent=gene-LFV90_03895;Dbxref=NCBI_GP:HJD61281.1;Name=HJD61281.1;gbkey=CDS;gene=dcd;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000985727.1;locus_tag=LFV90_03895;product=dCTP deaminase;protein_id=HJD61281.1;transl_table=11 DYDR01000005.1 tpg gene 261379 262689 . + . ID=gene-LFV90_03900;Name=LFV90_03900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_03900 DYDR01000005.1 Protein Homology CDS 261379 262689 . + 0 ID=cds-HJD61282.1;Parent=gene-LFV90_03900;Dbxref=NCBI_GP:HJD61282.1;Name=HJD61282.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004599726.1;locus_tag=LFV90_03900;product=porin;protein_id=HJD61282.1;transl_table=11 DYDR01000005.1 tpg gene 262826 263158 . - . ID=gene-LFV90_03905;Name=LFV90_03905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_03905 DYDR01000005.1 Protein Homology CDS 262826 263158 . - 0 ID=cds-HJD61283.1;Parent=gene-LFV90_03905;Dbxref=NCBI_GP:HJD61283.1;Name=HJD61283.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012013302.1;locus_tag=LFV90_03905;product=iron-sulfur cluster assembly accessory protein;protein_id=HJD61283.1;transl_table=11 DYDR01000005.1 tpg gene 263502 264653 . + . ID=gene-LFV90_03910;Name=LFV90_03910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_03910 DYDR01000005.1 Protein Homology CDS 263502 264653 . + 0 ID=cds-HJD61284.1;Parent=gene-LFV90_03910;Dbxref=NCBI_GP:HJD61284.1;Name=HJD61284.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012151513.1;locus_tag=LFV90_03910;product=deoxyguanosinetriphosphate triphosphohydrolase;protein_id=HJD61284.1;transl_table=11 DYDR01000005.1 tpg gene 264663 266393 . + . ID=gene-LFV90_03915;Name=argS;gbkey=Gene;gene=argS;gene_biotype=protein_coding;locus_tag=LFV90_03915 DYDR01000005.1 Protein Homology CDS 264663 266393 . + 0 ID=cds-HJD61285.1;Parent=gene-LFV90_03915;Dbxref=NCBI_GP:HJD61285.1;Name=HJD61285.1;gbkey=CDS;gene=argS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012013304.1;locus_tag=LFV90_03915;product=arginine--tRNA ligase;protein_id=HJD61285.1;transl_table=11 DYDR01000005.1 tpg gene 266555 267241 . + . ID=gene-LFV90_03920;Name=LFV90_03920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_03920 DYDR01000005.1 Protein Homology CDS 266555 267241 . + 0 ID=cds-HJD61286.1;Parent=gene-LFV90_03920;Dbxref=NCBI_GP:HJD61286.1;Name=HJD61286.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014409838.1;locus_tag=LFV90_03920;product=SPOR domain-containing protein;protein_id=HJD61286.1;transl_table=11 DYDR01000005.1 tpg gene 267290 267571 . + . ID=gene-LFV90_03925;Name=LFV90_03925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_03925 DYDR01000005.1 Protein Homology CDS 267290 267571 . + 0 ID=cds-HJD61287.1;Parent=gene-LFV90_03925;Dbxref=NCBI_GP:HJD61287.1;Name=HJD61287.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477955.1;locus_tag=LFV90_03925;product=hypothetical protein;protein_id=HJD61287.1;transl_table=11 DYDR01000005.1 tpg gene 267599 269809 . + . ID=gene-LFV90_03930;Name=parC;gbkey=Gene;gene=parC;gene_biotype=protein_coding;locus_tag=LFV90_03930 DYDR01000005.1 Protein Homology CDS 267599 269809 . + 0 ID=cds-HJD61288.1;Parent=gene-LFV90_03930;Dbxref=NCBI_GP:HJD61288.1;Name=HJD61288.1;gbkey=CDS;gene=parC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477956.1;locus_tag=LFV90_03930;product=DNA topoisomerase IV subunit A;protein_id=HJD61288.1;transl_table=11 DYDR01000005.1 tpg gene 269820 270455 . - . ID=gene-LFV90_03935;Name=nth;gbkey=Gene;gene=nth;gene_biotype=protein_coding;locus_tag=LFV90_03935 DYDR01000005.1 Protein Homology CDS 269820 270455 . - 0 ID=cds-HJD61289.1;Parent=gene-LFV90_03935;Dbxref=NCBI_GP:HJD61289.1;Name=HJD61289.1;gbkey=CDS;gene=nth;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014412344.1;locus_tag=LFV90_03935;product=endonuclease III;protein_id=HJD61289.1;transl_table=11 DYDR01000005.1 tpg gene 270499 270813 . + . ID=gene-LFV90_03940;Name=grxD;gbkey=Gene;gene=grxD;gene_biotype=protein_coding;locus_tag=LFV90_03940 DYDR01000005.1 Protein Homology CDS 270499 270813 . + 0 ID=cds-HJD61290.1;Parent=gene-LFV90_03940;Dbxref=NCBI_GP:HJD61290.1;Name=HJD61290.1;gbkey=CDS;gene=grxD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014409020.1;locus_tag=LFV90_03940;product=Grx4 family monothiol glutaredoxin;protein_id=HJD61290.1;transl_table=11 DYDR01000005.1 tpg gene 271048 271689 . + . ID=gene-LFV90_03945;Name=LFV90_03945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_03945 DYDR01000005.1 Protein Homology CDS 271048 271689 . + 0 ID=cds-HJD61291.1;Parent=gene-LFV90_03945;Dbxref=NCBI_GP:HJD61291.1;Name=HJD61291.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014412342.1;locus_tag=LFV90_03945;product=dienelactone hydrolase family protein;protein_id=HJD61291.1;transl_table=11 DYDR01000005.1 tpg gene 271843 272484 . + . ID=gene-LFV90_03950;Name=LFV90_03950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_03950 DYDR01000005.1 Protein Homology CDS 271843 272484 . + 0 ID=cds-HJD61292.1;Parent=gene-LFV90_03950;Dbxref=NCBI_GP:HJD61292.1;Name=HJD61292.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013704.2;locus_tag=LFV90_03950;product=site-specific DNA-methyltransferase;protein_id=HJD61292.1;transl_table=11 DYDR01000005.1 tpg pseudogene 272499 273288 . + . ID=gene-LFV90_03955;Name=LFV90_03955;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LFV90_03955;pseudo=true DYDR01000005.1 Protein Homology CDS 272499 273288 . + 0 ID=cds-LFV90_03955;Parent=gene-LFV90_03955;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF026853.2;locus_tag=LFV90_03955;product=MvaI/BcnI family restriction endonuclease;pseudo=true;transl_table=11 DYDR01000005.1 tpg gene 273332 274594 . + . ID=gene-LFV90_03960;Name=LFV90_03960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_03960 DYDR01000005.1 Protein Homology CDS 273332 274594 . + 0 ID=cds-HJD61293.1;Parent=gene-LFV90_03960;Dbxref=NCBI_GP:HJD61293.1;Name=HJD61293.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012151264.1;locus_tag=LFV90_03960;product=serine hydroxymethyltransferase;protein_id=HJD61293.1;transl_table=11 DYDR01000005.1 tpg gene 274587 275483 . + . ID=gene-LFV90_03965;Name=lipA;gbkey=Gene;gene=lipA;gene_biotype=protein_coding;locus_tag=LFV90_03965 DYDR01000005.1 Protein Homology CDS 274587 275483 . + 0 ID=cds-HJD61294.1;Parent=gene-LFV90_03965;Dbxref=NCBI_GP:HJD61294.1;Name=HJD61294.1;gbkey=CDS;gene=lipA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012150019.1;locus_tag=LFV90_03965;product=lipoyl synthase;protein_id=HJD61294.1;transl_table=11 DYDR01000005.1 tpg gene 276360 276911 . + . ID=gene-LFV90_03970;Name=ybeY;gbkey=Gene;gene=ybeY;gene_biotype=protein_coding;locus_tag=LFV90_03970 DYDR01000005.1 Protein Homology CDS 276360 276911 . + 0 ID=cds-HJD61295.1;Parent=gene-LFV90_03970;Dbxref=NCBI_GP:HJD61295.1;Name=HJD61295.1;gbkey=CDS;gene=ybeY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012151506.1;locus_tag=LFV90_03970;product=rRNA maturation RNase YbeY;protein_id=HJD61295.1;transl_table=11 DYDR01000005.1 tpg gene 276920 277825 . + . ID=gene-LFV90_03975;Name=LFV90_03975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_03975 DYDR01000005.1 Protein Homology CDS 276920 277825 . + 0 ID=cds-HJD61296.1;Parent=gene-LFV90_03975;Dbxref=NCBI_GP:HJD61296.1;Name=HJD61296.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012151505.1;locus_tag=LFV90_03975;product=hemolysin family protein;protein_id=HJD61296.1;transl_table=11 DYDR01000005.1 tpg gene 277809 278093 . + . ID=gene-LFV90_03980;Name=LFV90_03980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_03980 DYDR01000005.1 Protein Homology CDS 277809 278093 . + 0 ID=cds-HJD61297.1;Parent=gene-LFV90_03980;Dbxref=NCBI_GP:HJD61297.1;Name=HJD61297.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR03775.1;locus_tag=LFV90_03980;product=palindromic element RPE3 domain-containing protein;protein_id=HJD61297.1;transl_table=11 DYDR01000005.1 tpg gene 278053 278490 . + . ID=gene-LFV90_03985;Name=LFV90_03985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_03985 DYDR01000005.1 Protein Homology CDS 278053 278490 . + 0 ID=cds-HJD61298.1;Parent=gene-LFV90_03985;Dbxref=NCBI_GP:HJD61298.1;Name=HJD61298.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012153120.1;locus_tag=LFV90_03985;product=NUDIX hydrolase;protein_id=HJD61298.1;transl_table=11 DYDR01000005.1 tpg gene 278590 278781 . + . ID=gene-LFV90_03990;Name=LFV90_03990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_03990 DYDR01000005.1 GeneMarkS-2+ CDS 278590 278781 . + 0 ID=cds-HJD61299.1;Parent=gene-LFV90_03990;Dbxref=NCBI_GP:HJD61299.1;Name=HJD61299.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_03990;product=hypothetical protein;protein_id=HJD61299.1;transl_table=11 DYDR01000005.1 tpg gene 278864 279328 . - . ID=gene-LFV90_03995;Name=LFV90_03995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_03995 DYDR01000005.1 Protein Homology CDS 278864 279328 . - 0 ID=cds-HJD61300.1;Parent=gene-LFV90_03995;Dbxref=NCBI_GP:HJD61300.1;Name=HJD61300.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477964.1;locus_tag=LFV90_03995;product=DUF2269 domain-containing protein;protein_id=HJD61300.1;transl_table=11 DYDR01000005.1 tpg gene 279328 279822 . - . ID=gene-LFV90_04000;Name=LFV90_04000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_04000 DYDR01000005.1 Protein Homology CDS 279328 279822 . - 0 ID=cds-HJD61301.1;Parent=gene-LFV90_04000;Dbxref=NCBI_GP:HJD61301.1;Name=HJD61301.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014273741.1;locus_tag=LFV90_04000;product=DoxX-like family protein;protein_id=HJD61301.1;transl_table=11 DYDR01000005.1 tpg gene 280096 280485 . - . ID=gene-LFV90_04005;Name=LFV90_04005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_04005 DYDR01000005.1 Protein Homology CDS 280096 280485 . - 0 ID=cds-HJD61302.1;Parent=gene-LFV90_04005;Dbxref=NCBI_GP:HJD61302.1;Name=HJD61302.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024852.2;locus_tag=LFV90_04005;product=NAD(P)H-binding protein;protein_id=HJD61302.1;transl_table=11 DYDR01000005.1 tpg gene 280437 280619 . - . ID=gene-LFV90_04010;Name=LFV90_04010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_04010 DYDR01000005.1 Protein Homology CDS 280437 280619 . - 0 ID=cds-HJD61303.1;Parent=gene-LFV90_04010;Dbxref=NCBI_GP:HJD61303.1;Name=HJD61303.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017206.2;locus_tag=LFV90_04010;product=NAD-dependent epimerase/dehydratase family protein;protein_id=HJD61303.1;transl_table=11 DYDR01000005.1 tpg gene 280724 281419 . - . ID=gene-LFV90_04015;Name=LFV90_04015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_04015 DYDR01000005.1 Protein Homology CDS 280724 281419 . - 0 ID=cds-HJD61304.1;Parent=gene-LFV90_04015;Dbxref=NCBI_GP:HJD61304.1;Name=HJD61304.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004596749.1;locus_tag=LFV90_04015;product=TIGR02281 family clan AA aspartic protease;protein_id=HJD61304.1;transl_table=11 DYDR01000005.1 tpg gene 281521 282243 . - . ID=gene-LFV90_04020;Name=LFV90_04020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_04020 DYDR01000005.1 Protein Homology CDS 281521 282243 . - 0 ID=cds-HJD61305.1;Parent=gene-LFV90_04020;Dbxref=NCBI_GP:HJD61305.1;Name=HJD61305.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012153256.1;locus_tag=LFV90_04020;product=amino acid ABC transporter ATP-binding protein;protein_id=HJD61305.1;transl_table=11 DYDR01000005.1 tpg gene 282240 283004 . - . ID=gene-LFV90_04025;Name=LFV90_04025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_04025 DYDR01000005.1 Protein Homology CDS 282240 283004 . - 0 ID=cds-HJD61306.1;Parent=gene-LFV90_04025;Dbxref=NCBI_GP:HJD61306.1;Name=HJD61306.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017442768.1;locus_tag=LFV90_04025;product=MBL fold metallo-hydrolase;protein_id=HJD61306.1;transl_table=11 DYDR01000005.1 tpg gene 283019 283696 . + . ID=gene-LFV90_04030;Name=LFV90_04030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_04030 DYDR01000005.1 Protein Homology CDS 283019 283696 . + 0 ID=cds-HJD61307.1;Parent=gene-LFV90_04030;Dbxref=NCBI_GP:HJD61307.1;Name=HJD61307.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014364302.1;locus_tag=LFV90_04030;product=phosphatase PAP2 family protein;protein_id=HJD61307.1;transl_table=11 DYDR01000005.1 tpg gene 283816 284898 . + . ID=gene-LFV90_04035;Name=LFV90_04035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_04035 DYDR01000005.1 Protein Homology CDS 283816 284898 . + 0 ID=cds-HJD61308.1;Parent=gene-LFV90_04035;Dbxref=NCBI_GP:HJD61308.1;Name=HJD61308.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004596741.1;locus_tag=LFV90_04035;product=LptF/LptG family permease;protein_id=HJD61308.1;transl_table=11 DYDR01000005.1 tpg gene 285156 285599 . - . ID=gene-LFV90_04040;Name=LFV90_04040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_04040 DYDR01000005.1 GeneMarkS-2+ CDS 285156 285599 . - 0 ID=cds-HJD61309.1;Parent=gene-LFV90_04040;Dbxref=NCBI_GP:HJD61309.1;Name=HJD61309.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_04040;product=hypothetical protein;protein_id=HJD61309.1;transl_table=11 DYDR01000005.1 tpg gene 285758 286114 . - . ID=gene-LFV90_04045;Name=LFV90_04045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_04045 DYDR01000005.1 GeneMarkS-2+ CDS 285758 286114 . - 0 ID=cds-HJD61310.1;Parent=gene-LFV90_04045;Dbxref=NCBI_GP:HJD61310.1;Name=HJD61310.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_04045;product=hypothetical protein;protein_id=HJD61310.1;transl_table=11 DYDR01000005.1 tpg gene 286303 286683 . - . ID=gene-LFV90_04050;Name=LFV90_04050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_04050 DYDR01000005.1 GeneMarkS-2+ CDS 286303 286683 . - 0 ID=cds-HJD61311.1;Parent=gene-LFV90_04050;Dbxref=NCBI_GP:HJD61311.1;Name=HJD61311.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_04050;product=hypothetical protein;protein_id=HJD61311.1;transl_table=11 DYDR01000005.1 tpg gene 286740 287012 . - . ID=gene-LFV90_04055;Name=LFV90_04055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_04055 DYDR01000005.1 GeneMarkS-2+ CDS 286740 287012 . - 0 ID=cds-HJD61312.1;Parent=gene-LFV90_04055;Dbxref=NCBI_GP:HJD61312.1;Name=HJD61312.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_04055;product=hypothetical protein;protein_id=HJD61312.1;transl_table=11 DYDR01000005.1 tpg gene 287146 287631 . - . ID=gene-LFV90_04060;Name=LFV90_04060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_04060 DYDR01000005.1 GeneMarkS-2+ CDS 287146 287631 . - 0 ID=cds-HJD61313.1;Parent=gene-LFV90_04060;Dbxref=NCBI_GP:HJD61313.1;Name=HJD61313.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_04060;product=hypothetical protein;protein_id=HJD61313.1;transl_table=11 DYDR01000005.1 tpg gene 287647 288117 . - . ID=gene-LFV90_04065;Name=LFV90_04065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_04065 DYDR01000005.1 GeneMarkS-2+ CDS 287647 288117 . - 0 ID=cds-HJD61314.1;Parent=gene-LFV90_04065;Dbxref=NCBI_GP:HJD61314.1;Name=HJD61314.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_04065;product=hypothetical protein;protein_id=HJD61314.1;transl_table=11 DYDR01000005.1 tpg gene 288501 288662 . - . ID=gene-LFV90_04070;Name=LFV90_04070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_04070 DYDR01000005.1 GeneMarkS-2+ CDS 288501 288662 . - 0 ID=cds-HJD61315.1;Parent=gene-LFV90_04070;Dbxref=NCBI_GP:HJD61315.1;Name=HJD61315.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_04070;product=hypothetical protein;protein_id=HJD61315.1;transl_table=11 DYDR01000005.1 tpg gene 288711 289697 . - . ID=gene-LFV90_04075;Name=obgE;gbkey=Gene;gene=obgE;gene_biotype=protein_coding;locus_tag=LFV90_04075 DYDR01000005.1 Protein Homology CDS 288711 289697 . - 0 ID=cds-HJD61316.1;Parent=gene-LFV90_04075;Dbxref=NCBI_GP:HJD61316.1;Name=HJD61316.1;gbkey=CDS;gene=obgE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477975.1;locus_tag=LFV90_04075;product=GTPase ObgE;protein_id=HJD61316.1;transl_table=11 DYDR01000005.1 tpg gene 289809 291116 . - . ID=gene-LFV90_04080;Name=LFV90_04080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_04080 DYDR01000005.1 Protein Homology CDS 289809 291116 . - 0 ID=cds-HJD61317.1;Parent=gene-LFV90_04080;Dbxref=NCBI_GP:HJD61317.1;Name=HJD61317.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014409697.1;locus_tag=LFV90_04080;product=citrate synthase;protein_id=HJD61317.1;transl_table=11 DYDR01000005.1 tpg gene 291336 291677 . - . ID=gene-LFV90_04085;Name=LFV90_04085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_04085 DYDR01000005.1 Protein Homology CDS 291336 291677 . - 0 ID=cds-HJD61318.1;Parent=gene-LFV90_04085;Dbxref=NCBI_GP:HJD61318.1;Name=HJD61318.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477978.1;locus_tag=LFV90_04085;product=type II toxin-antitoxin system HicB family antitoxin;protein_id=HJD61318.1;transl_table=11 DYDR01000005.1 tpg gene 291674 291931 . - . ID=gene-LFV90_04090;Name=LFV90_04090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_04090 DYDR01000005.1 Protein Homology CDS 291674 291931 . - 0 ID=cds-HJD61319.1;Parent=gene-LFV90_04090;Dbxref=NCBI_GP:HJD61319.1;Name=HJD61319.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019540.2;locus_tag=LFV90_04090;product=type II toxin-antitoxin system HicA family toxin;protein_id=HJD61319.1;transl_table=11 DYDR01000005.1 tpg gene 292024 292812 . - . ID=gene-LFV90_04095;Name=LFV90_04095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_04095 DYDR01000005.1 Protein Homology CDS 292024 292812 . - 0 ID=cds-HJD61320.1;Parent=gene-LFV90_04095;Dbxref=NCBI_GP:HJD61320.1;Name=HJD61320.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477902.1;locus_tag=LFV90_04095;product=uracil-DNA glycosylase;protein_id=HJD61320.1;transl_table=11 DYDR01000005.1 tpg gene 292827 293810 . + . ID=gene-LFV90_04100;Name=LFV90_04100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_04100 DYDR01000005.1 Protein Homology CDS 292827 293810 . + 0 ID=cds-HJD61321.1;Parent=gene-LFV90_04100;Dbxref=NCBI_GP:HJD61321.1;Name=HJD61321.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012149196.1;locus_tag=LFV90_04100;product=RluA family pseudouridine synthase;protein_id=HJD61321.1;transl_table=11 DYDR01000005.1 tpg gene 293919 295481 . + . ID=gene-LFV90_04105;Name=trmB;gbkey=Gene;gene=trmB;gene_biotype=protein_coding;locus_tag=LFV90_04105 DYDR01000005.1 Protein Homology CDS 293919 295481 . + 0 ID=cds-HJD61322.1;Parent=gene-LFV90_04105;Dbxref=NCBI_GP:HJD61322.1;Name=HJD61322.1;gbkey=CDS;gene=trmB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011191264.1;locus_tag=LFV90_04105;product=bifunctional peptide chain release factor N(5)-glutamine methyltransferase PrmC/tRNA (guanosine(46)-N7)-methyltransferase TrmB;protein_id=HJD61322.1;transl_table=11 DYDR01000005.1 tpg gene 295563 296147 . - . ID=gene-LFV90_04110;Name=LFV90_04110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_04110 DYDR01000005.1 Protein Homology CDS 295563 296147 . - 0 ID=cds-HJD61323.1;Parent=gene-LFV90_04110;Dbxref=NCBI_GP:HJD61323.1;Name=HJD61323.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017443424.1;locus_tag=LFV90_04110;product=ABC transporter substrate-binding protein;protein_id=HJD61323.1;transl_table=11 DYDR01000005.1 tpg gene 296159 296926 . - . ID=gene-LFV90_04115;Name=LFV90_04115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_04115 DYDR01000005.1 Protein Homology CDS 296159 296926 . - 0 ID=cds-HJD61324.1;Parent=gene-LFV90_04115;Dbxref=NCBI_GP:HJD61324.1;Name=HJD61324.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477981.1;locus_tag=LFV90_04115;product=MlaA family lipoprotein;protein_id=HJD61324.1;transl_table=11 DYDR01000005.1 tpg gene 296923 297936 . - . ID=gene-LFV90_04120;Name=LFV90_04120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_04120 DYDR01000005.1 Protein Homology CDS 296923 297936 . - 0 ID=cds-HJD61325.1;Parent=gene-LFV90_04120;Dbxref=NCBI_GP:HJD61325.1;Name=HJD61325.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477982.1;locus_tag=LFV90_04120;product=methyltransferase domain-containing protein;protein_id=HJD61325.1;transl_table=11 DYDR01000005.1 tpg gene 298086 298337 . + . ID=gene-LFV90_04125;Name=LFV90_04125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_04125 DYDR01000005.1 Protein Homology CDS 298086 298337 . + 0 ID=cds-HJD61326.1;Parent=gene-LFV90_04125;Dbxref=NCBI_GP:HJD61326.1;Name=HJD61326.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014391803.1;locus_tag=LFV90_04125;product=type II toxin-antitoxin system Phd/YefM family antitoxin;protein_id=HJD61326.1;transl_table=11 DYDR01000005.1 tpg gene 298330 298593 . + . ID=gene-LFV90_04130;Name=LFV90_04130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_04130 DYDR01000005.1 Protein Homology CDS 298330 298593 . + 0 ID=cds-HJD61327.1;Parent=gene-LFV90_04130;Dbxref=NCBI_GP:HJD61327.1;Name=HJD61327.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014408181.1;locus_tag=LFV90_04130;product=Txe/YoeB family addiction module toxin;protein_id=HJD61327.1;transl_table=11 DYDR01000005.1 tpg gene 298822 300021 . + . ID=gene-LFV90_04135;Name=LFV90_04135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_04135 DYDR01000005.1 Protein Homology CDS 298822 300021 . + 0 ID=cds-HJD61328.1;Parent=gene-LFV90_04135;Dbxref=NCBI_GP:HJD61328.1;Name=HJD61328.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012151557.1;locus_tag=LFV90_04135;product=pyridoxal phosphate-dependent aminotransferase;protein_id=HJD61328.1;transl_table=11 DYDR01000005.1 tpg gene 299963 300124 . - . ID=gene-LFV90_04140;Name=LFV90_04140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_04140 DYDR01000005.1 Protein Homology CDS 299963 300124 . - 0 ID=cds-HJD61329.1;Parent=gene-LFV90_04140;Dbxref=NCBI_GP:HJD61329.1;Name=HJD61329.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR03777.1;locus_tag=LFV90_04140;product=palindromic element RPE4 domain-containing protein;protein_id=HJD61329.1;transl_table=11 DYDR01000005.1 tpg gene 300164 300820 . + . ID=gene-LFV90_04145;Name=LFV90_04145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_04145 DYDR01000005.1 Protein Homology CDS 300164 300820 . + 0 ID=cds-HJD61330.1;Parent=gene-LFV90_04145;Dbxref=NCBI_GP:HJD61330.1;Name=HJD61330.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017443420.1;locus_tag=LFV90_04145;product=lysophospholipid acyltransferase family protein;protein_id=HJD61330.1;transl_table=11 DYDR01000005.1 tpg gene 300817 302073 . + . ID=gene-LFV90_04150;Name=waaA;gbkey=Gene;gene=waaA;gene_biotype=protein_coding;locus_tag=LFV90_04150 DYDR01000005.1 Protein Homology CDS 300817 302073 . + 0 ID=cds-HJD61331.1;Parent=gene-LFV90_04150;Dbxref=NCBI_GP:HJD61331.1;Name=HJD61331.1;gbkey=CDS;gene=waaA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477985.1;locus_tag=LFV90_04150;product=lipid IV(A) 3-deoxy-D-manno-octulosonic acid transferase;protein_id=HJD61331.1;transl_table=11 DYDR01000005.1 tpg gene 302185 302589 . + . ID=gene-LFV90_04155;Name=LFV90_04155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_04155 DYDR01000005.1 GeneMarkS-2+ CDS 302185 302589 . + 0 ID=cds-HJD61332.1;Parent=gene-LFV90_04155;Dbxref=NCBI_GP:HJD61332.1;Name=HJD61332.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_04155;product=hypothetical protein;protein_id=HJD61332.1;transl_table=11 DYDR01000005.1 tpg gene 302667 303008 . + . ID=gene-LFV90_04160;Name=LFV90_04160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_04160 DYDR01000005.1 GeneMarkS-2+ CDS 302667 303008 . + 0 ID=cds-HJD61333.1;Parent=gene-LFV90_04160;Dbxref=NCBI_GP:HJD61333.1;Name=HJD61333.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_04160;product=hypothetical protein;protein_id=HJD61333.1;transl_table=11 DYDR01000005.1 tpg gene 303459 303749 . + . ID=gene-LFV90_04165;Name=LFV90_04165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_04165 DYDR01000005.1 Protein Homology CDS 303459 303749 . + 0 ID=cds-HJD61334.1;Parent=gene-LFV90_04165;Dbxref=NCBI_GP:HJD61334.1;Name=HJD61334.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025165.2;locus_tag=LFV90_04165;product=ribose-phosphate pyrophosphokinase-like domain-containing protein;protein_id=HJD61334.1;transl_table=11 DYDR01000005.1 tpg gene 303769 304227 . + . ID=gene-LFV90_04170;Name=LFV90_04170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_04170 DYDR01000005.1 Protein Homology CDS 303769 304227 . + 0 ID=cds-HJD61335.1;Parent=gene-LFV90_04170;Dbxref=NCBI_GP:HJD61335.1;Name=HJD61335.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR01251.1;locus_tag=LFV90_04170;product=hypothetical protein;protein_id=HJD61335.1;transl_table=11 DYDR01000005.1 tpg gene 304224 305309 . + . ID=gene-LFV90_04175;Name=LFV90_04175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_04175 DYDR01000005.1 Protein Homology CDS 304224 305309 . + 0 ID=cds-HJD61336.1;Parent=gene-LFV90_04175;Dbxref=NCBI_GP:HJD61336.1;Name=HJD61336.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477989.1;locus_tag=LFV90_04175;product=alanine racemase;protein_id=HJD61336.1;transl_table=11 DYDR01000005.1 tpg gene 305449 306228 . + . ID=gene-LFV90_04180;Name=LFV90_04180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_04180 DYDR01000005.1 Protein Homology CDS 305449 306228 . + 0 ID=cds-HJD61337.1;Parent=gene-LFV90_04180;Dbxref=NCBI_GP:HJD61337.1;Name=HJD61337.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011190515.1;locus_tag=LFV90_04180;product=ABC transporter permease;protein_id=HJD61337.1;transl_table=11 DYDR01000005.1 tpg gene 306236 306991 . + . ID=gene-LFV90_04185;Name=LFV90_04185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_04185 DYDR01000005.1 Protein Homology CDS 306236 306991 . + 0 ID=cds-HJD61338.1;Parent=gene-LFV90_04185;Dbxref=NCBI_GP:HJD61338.1;Name=HJD61338.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017443428.1;locus_tag=LFV90_04185;product=ABC transporter ATP-binding protein;protein_id=HJD61338.1;transl_table=11 DYDR01000005.1 tpg gene 306993 307241 . + . ID=gene-LFV90_04190;Name=LFV90_04190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_04190 DYDR01000005.1 Protein Homology CDS 306993 307241 . + 0 ID=cds-HJD61339.1;Parent=gene-LFV90_04190;Dbxref=NCBI_GP:HJD61339.1;Name=HJD61339.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017443429.1;locus_tag=LFV90_04190;product=DUF5510 family protein;protein_id=HJD61339.1;transl_table=11 DYDR01000005.1 tpg gene 307865 308203 . - . ID=gene-LFV90_04195;Name=LFV90_04195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_04195 DYDR01000005.1 Protein Homology CDS 307865 308203 . - 0 ID=cds-HJD61340.1;Parent=gene-LFV90_04195;Dbxref=NCBI_GP:HJD61340.1;Name=HJD61340.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF007495.0;locus_tag=LFV90_04195;product=tRNA-binding protein;protein_id=HJD61340.1;transl_table=11 DYDR01000005.1 tpg gene 308206 309030 . - . ID=gene-LFV90_04200;Name=kdsA;gbkey=Gene;gene=kdsA;gene_biotype=protein_coding;locus_tag=LFV90_04200 DYDR01000005.1 Protein Homology CDS 308206 309030 . - 0 ID=cds-HJD61341.1;Parent=gene-LFV90_04200;Dbxref=NCBI_GP:HJD61341.1;Name=HJD61341.1;gbkey=CDS;gene=kdsA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477995.1;locus_tag=LFV90_04200;product=3-deoxy-8-phosphooctulonate synthase;protein_id=HJD61341.1;transl_table=11 DYDR01000005.1 tpg gene 309047 309349 . - . ID=gene-LFV90_04205;Name=secG;gbkey=Gene;gene=secG;gene_biotype=protein_coding;locus_tag=LFV90_04205 DYDR01000005.1 Protein Homology CDS 309047 309349 . - 0 ID=cds-HJD61342.1;Parent=gene-LFV90_04205;Dbxref=NCBI_GP:HJD61342.1;Name=HJD61342.1;gbkey=CDS;gene=secG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477996.1;locus_tag=LFV90_04205;product=preprotein translocase subunit SecG;protein_id=HJD61342.1;transl_table=11 DYDR01000005.1 tpg gene 309460 309735 . - . ID=gene-LFV90_04210;Name=LFV90_04210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_04210 DYDR01000005.1 Protein Homology CDS 309460 309735 . - 0 ID=cds-HJD61343.1;Parent=gene-LFV90_04210;Dbxref=NCBI_GP:HJD61343.1;Name=HJD61343.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477997.1;locus_tag=LFV90_04210;product=DUF2672 domain-containing protein;protein_id=HJD61343.1;transl_table=11 DYDR01000005.1 tpg gene 309738 311405 . - . ID=gene-LFV90_04215;Name=ettA;gbkey=Gene;gene=ettA;gene_biotype=protein_coding;locus_tag=LFV90_04215 DYDR01000005.1 Protein Homology CDS 309738 311405 . - 0 ID=cds-HJD61344.1;Parent=gene-LFV90_04215;Dbxref=NCBI_GP:HJD61344.1;Name=HJD61344.1;gbkey=CDS;gene=ettA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017443392.1;locus_tag=LFV90_04215;product=energy-dependent translational throttle protein EttA;protein_id=HJD61344.1;transl_table=11 DYDR01000005.1 tpg gene 311426 312292 . - . ID=gene-LFV90_04220;Name=LFV90_04220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_04220 DYDR01000005.1 Protein Homology CDS 311426 312292 . - 0 ID=cds-HJD61345.1;Parent=gene-LFV90_04220;Dbxref=NCBI_GP:HJD61345.1;Name=HJD61345.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011190546.1;locus_tag=LFV90_04220;product=ParB/RepB/Spo0J family partition protein;protein_id=HJD61345.1;transl_table=11 DYDR01000005.1 tpg gene 312279 313052 . - . ID=gene-LFV90_04225;Name=LFV90_04225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_04225 DYDR01000005.1 Protein Homology CDS 312279 313052 . - 0 ID=cds-HJD61346.1;Parent=gene-LFV90_04225;Dbxref=NCBI_GP:HJD61346.1;Name=HJD61346.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011478000.1;locus_tag=LFV90_04225;product=AAA family ATPase;protein_id=HJD61346.1;transl_table=11 DYDR01000005.1 tpg gene 313049 313627 . - . ID=gene-LFV90_04230;Name=rsmG;gbkey=Gene;gene=rsmG;gene_biotype=protein_coding;locus_tag=LFV90_04230 DYDR01000005.1 Protein Homology CDS 313049 313627 . - 0 ID=cds-HJD61347.1;Parent=gene-LFV90_04230;Dbxref=NCBI_GP:HJD61347.1;Name=HJD61347.1;gbkey=CDS;gene=rsmG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012262197.1;locus_tag=LFV90_04230;product=16S rRNA (guanine(527)-N(7))-methyltransferase RsmG;protein_id=HJD61347.1;transl_table=11 DYDR01000005.1 tpg gene 313608 315473 . - . ID=gene-LFV90_04235;Name=mnmG;gbkey=Gene;gene=mnmG;gene_biotype=protein_coding;locus_tag=LFV90_04235 DYDR01000005.1 Protein Homology CDS 313608 315473 . - 0 ID=cds-HJD61348.1;Parent=gene-LFV90_04235;Dbxref=NCBI_GP:HJD61348.1;Name=HJD61348.1;gbkey=CDS;gene=mnmG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011190549.1;locus_tag=LFV90_04235;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG;protein_id=HJD61348.1;transl_table=11 DYDR01000005.1 tpg gene 315477 315899 . - . ID=gene-LFV90_04240;Name=ndk;gbkey=Gene;gene=ndk;gene_biotype=protein_coding;locus_tag=LFV90_04240 DYDR01000005.1 Protein Homology CDS 315477 315899 . - 0 ID=cds-HJD61349.1;Parent=gene-LFV90_04240;Dbxref=NCBI_GP:HJD61349.1;Name=HJD61349.1;gbkey=CDS;gene=ndk;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012013293.1;locus_tag=LFV90_04240;product=nucleoside-diphosphate kinase;protein_id=HJD61349.1;transl_table=11 DYDR01000005.1 tpg gene 315928 317217 . - . ID=gene-LFV90_04245;Name=LFV90_04245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_04245 DYDR01000005.1 Protein Homology CDS 315928 317217 . - 0 ID=cds-HJD61350.1;Parent=gene-LFV90_04245;Dbxref=NCBI_GP:HJD61350.1;Name=HJD61350.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017443387.1;locus_tag=LFV90_04245;product=MFS transporter;protein_id=HJD61350.1;transl_table=11 DYDR01000005.1 tpg gene 317280 318776 . - . ID=gene-LFV90_04250;Name=tlc1;gbkey=Gene;gene=tlc1;gene_biotype=protein_coding;locus_tag=LFV90_04250 DYDR01000005.1 Protein Homology CDS 317280 318776 . - 0 ID=cds-HJD61351.1;Parent=gene-LFV90_04250;Dbxref=NCBI_GP:HJD61351.1;Name=HJD61351.1;gbkey=CDS;gene=tlc1;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004599717.1;locus_tag=LFV90_04250;product=ATP/ADP exchange transporter Tlc1;protein_id=HJD61351.1;transl_table=11 DYDR01000005.1 tpg gene 318849 319766 . - . ID=gene-LFV90_04255;Name=LFV90_04255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_04255 DYDR01000005.1 Protein Homology CDS 318849 319766 . - 0 ID=cds-HJD61352.1;Parent=gene-LFV90_04255;Dbxref=NCBI_GP:HJD61352.1;Name=HJD61352.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011478006.1;locus_tag=LFV90_04255;product=50S ribosomal protein L11 methyltransferase;protein_id=HJD61352.1;transl_table=11 DYDR01000005.1 tpg gene 319803 320153 . + . ID=gene-LFV90_04260;Name=LFV90_04260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_04260 DYDR01000005.1 Protein Homology CDS 319803 320153 . + 0 ID=cds-HJD61353.1;Parent=gene-LFV90_04260;Dbxref=NCBI_GP:HJD61353.1;Name=HJD61353.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014363522.1;locus_tag=LFV90_04260;product=hypothetical protein;protein_id=HJD61353.1;transl_table=11 DYDR01000005.1 tpg gene 320154 321092 . - . ID=gene-LFV90_04265;Name=LFV90_04265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_04265 DYDR01000005.1 Protein Homology CDS 320154 321092 . - 0 ID=cds-HJD61354.1;Parent=gene-LFV90_04265;Dbxref=NCBI_GP:HJD61354.1;Name=HJD61354.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016917245.1;locus_tag=LFV90_04265;product=threonylcarbamoyl-AMP synthase;protein_id=HJD61354.1;transl_table=11 DYDR01000005.1 tpg gene 321089 323071 . - . ID=gene-LFV90_04270;Name=glyS;gbkey=Gene;gene=glyS;gene_biotype=protein_coding;locus_tag=LFV90_04270 DYDR01000005.1 Protein Homology CDS 321089 323071 . - 0 ID=cds-HJD61355.1;Parent=gene-LFV90_04270;Dbxref=NCBI_GP:HJD61355.1;Name=HJD61355.1;gbkey=CDS;gene=glyS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012720092.1;locus_tag=LFV90_04270;product=glycine--tRNA ligase subunit beta;protein_id=HJD61355.1;transl_table=11 DYDR01000005.1 tpg gene 323064 323933 . - . ID=gene-LFV90_04275;Name=LFV90_04275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_04275 DYDR01000005.1 Protein Homology CDS 323064 323933 . - 0 ID=cds-HJD61356.1;Parent=gene-LFV90_04275;Dbxref=NCBI_GP:HJD61356.1;Name=HJD61356.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004596781.1;locus_tag=LFV90_04275;product=glycine--tRNA ligase subunit alpha;protein_id=HJD61356.1;transl_table=11 DYDR01000005.1 tpg gene 323965 324372 . - . ID=gene-LFV90_04280;Name=LFV90_04280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_04280 DYDR01000005.1 Protein Homology CDS 323965 324372 . - 0 ID=cds-HJD61357.1;Parent=gene-LFV90_04280;Dbxref=NCBI_GP:HJD61357.1;Name=HJD61357.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014409707.1;locus_tag=LFV90_04280;product=type II toxin-antitoxin system VapC family toxin;protein_id=HJD61357.1;transl_table=11 DYDR01000005.1 tpg gene 324369 324614 . - . ID=gene-LFV90_04285;Name=LFV90_04285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_04285 DYDR01000005.1 Protein Homology CDS 324369 324614 . - 0 ID=cds-HJD61358.1;Parent=gene-LFV90_04285;Dbxref=NCBI_GP:HJD61358.1;Name=HJD61358.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014366170.1;locus_tag=LFV90_04285;product=type II toxin-antitoxin system Phd/YefM family antitoxin;protein_id=HJD61358.1;transl_table=11 DYDR01000005.1 tpg gene 324784 326121 . - . ID=gene-LFV90_04290;Name=tig;gbkey=Gene;gene=tig;gene_biotype=protein_coding;locus_tag=LFV90_04290 DYDR01000005.1 Protein Homology CDS 324784 326121 . - 0 ID=cds-HJD61359.1;Parent=gene-LFV90_04290;Dbxref=NCBI_GP:HJD61359.1;Name=HJD61359.1;gbkey=CDS;gene=tig;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011478013.1;locus_tag=LFV90_04290;product=trigger factor;protein_id=HJD61359.1;transl_table=11 DYDR01000005.1 tpg gene 326361 326570 . + . ID=gene-LFV90_04295;Name=LFV90_04295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_04295 DYDR01000005.1 GeneMarkS-2+ CDS 326361 326570 . + 0 ID=cds-HJD61360.1;Parent=gene-LFV90_04295;Dbxref=NCBI_GP:HJD61360.1;Name=HJD61360.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_04295;product=hypothetical protein;protein_id=HJD61360.1;transl_table=11 DYDR01000005.1 tpg gene 326533 326970 . + . ID=gene-LFV90_04300;Name=LFV90_04300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_04300 DYDR01000005.1 Protein Homology CDS 326533 326970 . + 0 ID=cds-HJD61361.1;Parent=gene-LFV90_04300;Dbxref=NCBI_GP:HJD61361.1;Name=HJD61361.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017539.2;locus_tag=LFV90_04300;product=NACHT domain-containing protein;protein_id=HJD61361.1;transl_table=11 DYDR01000005.1 tpg gene 326991 328238 . + . ID=gene-LFV90_04305;Name=LFV90_04305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_04305 DYDR01000005.1 GeneMarkS-2+ CDS 326991 328238 . + 0 ID=cds-HJD61362.1;Parent=gene-LFV90_04305;Dbxref=NCBI_GP:HJD61362.1;Name=HJD61362.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_04305;product=hypothetical protein;protein_id=HJD61362.1;transl_table=11 DYDR01000005.1 tpg gene 328309 328605 . + . ID=gene-LFV90_04310;Name=LFV90_04310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_04310 DYDR01000005.1 GeneMarkS-2+ CDS 328309 328605 . + 0 ID=cds-HJD61363.1;Parent=gene-LFV90_04310;Dbxref=NCBI_GP:HJD61363.1;Name=HJD61363.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_04310;product=hypothetical protein;protein_id=HJD61363.1;transl_table=11 DYDR01000005.1 tpg gene 328789 329532 . + . ID=gene-LFV90_04315;Name=LFV90_04315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_04315 DYDR01000005.1 Protein Homology CDS 328789 329532 . + 0 ID=cds-HJD61364.1;Parent=gene-LFV90_04315;Dbxref=NCBI_GP:HJD61364.1;Name=HJD61364.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013747.2;locus_tag=LFV90_04315;product=hypothetical protein;protein_id=HJD61364.1;transl_table=11 DYDR01000005.1 tpg gene 329565 329927 . + . ID=gene-LFV90_04320;Name=LFV90_04320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_04320 DYDR01000005.1 GeneMarkS-2+ CDS 329565 329927 . + 0 ID=cds-HJD61365.1;Parent=gene-LFV90_04320;Dbxref=NCBI_GP:HJD61365.1;Name=HJD61365.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_04320;product=hypothetical protein;protein_id=HJD61365.1;transl_table=11 DYDR01000005.1 tpg gene 330422 330838 . + . ID=gene-LFV90_04325;Name=LFV90_04325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_04325 DYDR01000005.1 GeneMarkS-2+ CDS 330422 330838 . + 0 ID=cds-HJD61366.1;Parent=gene-LFV90_04325;Dbxref=NCBI_GP:HJD61366.1;Name=HJD61366.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_04325;product=hypothetical protein;protein_id=HJD61366.1;transl_table=11 DYDR01000005.1 tpg gene 330910 331134 . + . ID=gene-LFV90_04330;Name=LFV90_04330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_04330 DYDR01000005.1 GeneMarkS-2+ CDS 330910 331134 . + 0 ID=cds-HJD61367.1;Parent=gene-LFV90_04330;Dbxref=NCBI_GP:HJD61367.1;Name=HJD61367.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_04330;product=hypothetical protein;protein_id=HJD61367.1;transl_table=11 DYDR01000005.1 tpg gene 331125 331286 . + . ID=gene-LFV90_04335;Name=LFV90_04335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_04335 DYDR01000005.1 GeneMarkS-2+ CDS 331125 331286 . + 0 ID=cds-HJD61368.1;Parent=gene-LFV90_04335;Dbxref=NCBI_GP:HJD61368.1;Name=HJD61368.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_04335;product=hypothetical protein;protein_id=HJD61368.1;transl_table=11 DYDR01000005.1 tpg gene 331337 331480 . - . ID=gene-LFV90_04340;Name=LFV90_04340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_04340 DYDR01000005.1 GeneMarkS-2+ CDS 331337 331480 . - 0 ID=cds-HJD61369.1;Parent=gene-LFV90_04340;Dbxref=NCBI_GP:HJD61369.1;Name=HJD61369.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_04340;product=hypothetical protein;protein_id=HJD61369.1;transl_table=11 DYDR01000005.1 tpg gene 331489 332211 . - . ID=gene-LFV90_04345;Name=LFV90_04345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_04345 DYDR01000005.1 Protein Homology CDS 331489 332211 . - 0 ID=cds-HJD61370.1;Parent=gene-LFV90_04345;Dbxref=NCBI_GP:HJD61370.1;Name=HJD61370.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016629.2;locus_tag=LFV90_04345;product=Rpn family recombination-promoting nuclease/putative transposase;protein_id=HJD61370.1;transl_table=11 DYDR01000005.1 tpg gene 332429 335062 . - . ID=gene-LFV90_04350;Name=alaS;gbkey=Gene;gene=alaS;gene_biotype=protein_coding;locus_tag=LFV90_04350 DYDR01000005.1 Protein Homology CDS 332429 335062 . - 0 ID=cds-HJD61371.1;Parent=gene-LFV90_04350;Dbxref=NCBI_GP:HJD61371.1;Name=HJD61371.1;gbkey=CDS;gene=alaS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011476767.1;locus_tag=LFV90_04350;product=alanine--tRNA ligase;protein_id=HJD61371.1;transl_table=11 DYDR01000005.1 tpg gene 335141 336652 . + . ID=gene-LFV90_04355;Name=LFV90_04355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_04355 DYDR01000005.1 Protein Homology CDS 335141 336652 . + 0 ID=cds-HJD61372.1;Parent=gene-LFV90_04355;Dbxref=NCBI_GP:HJD61372.1;Name=HJD61372.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004596770.1;locus_tag=LFV90_04355;product=hypothetical protein;protein_id=HJD61372.1;transl_table=11 DYDR01000005.1 tpg gene 336671 337300 . + . ID=gene-LFV90_04360;Name=LFV90_04360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_04360 DYDR01000005.1 Protein Homology CDS 336671 337300 . + 0 ID=cds-HJD61373.1;Parent=gene-LFV90_04360;Dbxref=NCBI_GP:HJD61373.1;Name=HJD61373.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012151529.1;locus_tag=LFV90_04360;product=hypothetical protein;protein_id=HJD61373.1;transl_table=11 DYDR01000005.1 tpg gene 337273 338223 . + . ID=gene-LFV90_04365;Name=LFV90_04365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_04365 DYDR01000005.1 Protein Homology CDS 337273 338223 . + 0 ID=cds-HJD61374.1;Parent=gene-LFV90_04365;Dbxref=NCBI_GP:HJD61374.1;Name=HJD61374.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017442750.1;locus_tag=LFV90_04365;product=RP853 family protein;protein_id=HJD61374.1;transl_table=11 DYDR01000005.1 tpg gene 338269 338430 . - . ID=gene-LFV90_04370;Name=LFV90_04370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_04370 DYDR01000005.1 GeneMarkS-2+ CDS 338269 338430 . - 0 ID=cds-HJD61375.1;Parent=gene-LFV90_04370;Dbxref=NCBI_GP:HJD61375.1;Name=HJD61375.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_04370;product=hypothetical protein;protein_id=HJD61375.1;transl_table=11 DYDR01000005.1 tpg gene 338557 338850 . - . ID=gene-LFV90_04375;Name=LFV90_04375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_04375 DYDR01000005.1 GeneMarkS-2+ CDS 338557 338850 . - 0 ID=cds-HJD61376.1;Parent=gene-LFV90_04375;Dbxref=NCBI_GP:HJD61376.1;Name=HJD61376.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_04375;product=NlpC/P60 family protein;protein_id=HJD61376.1;transl_table=11 DYDR01000005.1 tpg gene 339046 339297 . - . ID=gene-LFV90_04380;Name=LFV90_04380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_04380 DYDR01000005.1 Protein Homology CDS 339046 339297 . - 0 ID=cds-HJD61377.1;Parent=gene-LFV90_04380;Dbxref=NCBI_GP:HJD61377.1;Name=HJD61377.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024315.2;locus_tag=LFV90_04380;product=SH3 domain-containing protein;protein_id=HJD61377.1;transl_table=11 DYDR01000005.1 tpg pseudogene 339280 339474 . - . ID=gene-LFV90_04385;Name=LFV90_04385;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LFV90_04385;pseudo=true DYDR01000005.1 Protein Homology CDS 339280 339474 . - 0 ID=cds-LFV90_04385;Parent=gene-LFV90_04385;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024314.2;locus_tag=LFV90_04385;product=NlpC-P60 family protein;pseudo=true;transl_table=11 DYDR01000005.1 tpg gene 339543 339680 . - . ID=gene-LFV90_04390;Name=LFV90_04390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_04390 DYDR01000005.1 GeneMarkS-2+ CDS 339543 339680 . - 0 ID=cds-HJD61378.1;Parent=gene-LFV90_04390;Dbxref=NCBI_GP:HJD61378.1;Name=HJD61378.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_04390;product=hypothetical protein;protein_id=HJD61378.1;transl_table=11 DYDR01000005.1 tpg gene 339930 341177 . + . ID=gene-LFV90_04395;Name=LFV90_04395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_04395 DYDR01000005.1 Protein Homology CDS 339930 341177 . + 0 ID=cds-HJD61379.1;Parent=gene-LFV90_04395;Dbxref=NCBI_GP:HJD61379.1;Name=HJD61379.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017442749.1;locus_tag=LFV90_04395;product=metabolite/H+ symporter;protein_id=HJD61379.1;transl_table=11 DYDR01000005.1 tpg gene 341464 341790 . + . ID=gene-LFV90_04400;Name=LFV90_04400;end_range=341790,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_04400;partial=true DYDR01000005.1 Protein Homology CDS 341464 341790 . + 0 ID=cds-HJD61380.1;Parent=gene-LFV90_04400;Dbxref=NCBI_GP:HJD61380.1;Name=HJD61380.1;end_range=341790,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477659.1;locus_tag=LFV90_04400;partial=true;product=Rpn family recombination-promoting nuclease/putative transposase;protein_id=HJD61380.1;transl_table=11 ##sequence-region DYDR01000006.1 1 250958 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2866300 DYDR01000006.1 tpg region 1 250958 . + . ID=DYDR01000006.1:1..250958;Dbxref=taxon:2866300;collection-date=2001-12-01;country=Madagascar: Toliara;environmental-sample=true;gbkey=Src;isolate=Choog2;isolation-source=Insect;metagenome-source=insect metagenome;metagenomic=true;mol_type=genomic DNA;nat-host=Columbicola hoogstraali DYDR01000006.1 tpg gene 91 426 . - . ID=gene-LFV90_04405;Name=LFV90_04405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_04405 DYDR01000006.1 GeneMarkS-2+ CDS 91 426 . - 0 ID=cds-HJD61381.1;Parent=gene-LFV90_04405;Dbxref=NCBI_GP:HJD61381.1;Name=HJD61381.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_04405;product=hypothetical protein;protein_id=HJD61381.1;transl_table=11 DYDR01000006.1 tpg gene 530 1279 . - . ID=gene-LFV90_04410;Name=LFV90_04410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_04410 DYDR01000006.1 Protein Homology CDS 530 1279 . - 0 ID=cds-HJD61382.1;Parent=gene-LFV90_04410;Dbxref=NCBI_GP:HJD61382.1;Name=HJD61382.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477560.1;locus_tag=LFV90_04410;product=gamma-glutamyl-gamma-aminobutyrate hydrolase family protein;protein_id=HJD61382.1;transl_table=11 DYDR01000006.1 tpg gene 1285 1806 . - . ID=gene-LFV90_04415;Name=LFV90_04415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_04415 DYDR01000006.1 Protein Homology CDS 1285 1806 . - 0 ID=cds-HJD61383.1;Parent=gene-LFV90_04415;Dbxref=NCBI_GP:HJD61383.1;Name=HJD61383.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004998253.1;locus_tag=LFV90_04415;product=5-formyltetrahydrofolate cyclo-ligase;protein_id=HJD61383.1;transl_table=11 DYDR01000006.1 tpg gene 1806 2180 . - . ID=gene-LFV90_04420;Name=LFV90_04420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_04420 DYDR01000006.1 Protein Homology CDS 1806 2180 . - 0 ID=cds-HJD61384.1;Parent=gene-LFV90_04420;Dbxref=NCBI_GP:HJD61384.1;Name=HJD61384.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477558.1;locus_tag=LFV90_04420;product=RDD family protein;protein_id=HJD61384.1;transl_table=11 DYDR01000006.1 tpg gene 2184 3782 . - . ID=gene-LFV90_04425;Name=ctaD;gbkey=Gene;gene=ctaD;gene_biotype=protein_coding;locus_tag=LFV90_04425 DYDR01000006.1 Protein Homology CDS 2184 3782 . - 0 ID=cds-HJD61385.1;Parent=gene-LFV90_04425;Dbxref=NCBI_GP:HJD61385.1;Name=HJD61385.1;gbkey=CDS;gene=ctaD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477557.1;locus_tag=LFV90_04425;product=cytochrome c oxidase subunit I;protein_id=HJD61385.1;transl_table=11 DYDR01000006.1 tpg gene 3978 4922 . - . ID=gene-LFV90_04430;Name=LFV90_04430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_04430 DYDR01000006.1 GeneMarkS-2+ CDS 3978 4922 . - 0 ID=cds-HJD61386.1;Parent=gene-LFV90_04430;Dbxref=NCBI_GP:HJD61386.1;Name=HJD61386.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_04430;product=hypothetical protein;protein_id=HJD61386.1;transl_table=11 DYDR01000006.1 tpg gene 4938 5747 . - . ID=gene-LFV90_04435;Name=coxB;gbkey=Gene;gene=coxB;gene_biotype=protein_coding;locus_tag=LFV90_04435 DYDR01000006.1 Protein Homology CDS 4938 5747 . - 0 ID=cds-HJD61387.1;Parent=gene-LFV90_04435;Dbxref=NCBI_GP:HJD61387.1;Name=HJD61387.1;gbkey=CDS;gene=coxB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477555.1;locus_tag=LFV90_04435;product=cytochrome c oxidase subunit II;protein_id=HJD61387.1;transl_table=11 DYDR01000006.1 tpg gene 5824 6378 . - . ID=gene-LFV90_04440;Name=LFV90_04440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_04440 DYDR01000006.1 Protein Homology CDS 5824 6378 . - 0 ID=cds-HJD61388.1;Parent=gene-LFV90_04440;Dbxref=NCBI_GP:HJD61388.1;Name=HJD61388.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014412823.1;locus_tag=LFV90_04440;product=FAD synthase;protein_id=HJD61388.1;transl_table=11 DYDR01000006.1 tpg gene 6560 7927 . + . ID=gene-LFV90_04445;Name=LFV90_04445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_04445 DYDR01000006.1 Protein Homology CDS 6560 7927 . + 0 ID=cds-HJD61389.1;Parent=gene-LFV90_04445;Dbxref=NCBI_GP:HJD61389.1;Name=HJD61389.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017443023.1;locus_tag=LFV90_04445;product=peptidoglycan DD-metalloendopeptidase family protein;protein_id=HJD61389.1;transl_table=11 DYDR01000006.1 tpg gene 8351 8941 . + . ID=gene-LFV90_04450;Name=lspA;gbkey=Gene;gene=lspA;gene_biotype=protein_coding;locus_tag=LFV90_04450 DYDR01000006.1 Protein Homology CDS 8351 8941 . + 0 ID=cds-HJD61390.1;Parent=gene-LFV90_04450;Dbxref=NCBI_GP:HJD61390.1;Name=HJD61390.1;gbkey=CDS;gene=lspA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477552.1;locus_tag=LFV90_04450;product=signal peptidase II;protein_id=HJD61390.1;transl_table=11 DYDR01000006.1 tpg gene 8967 9215 . + . ID=gene-LFV90_04455;Name=LFV90_04455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_04455 DYDR01000006.1 Protein Homology CDS 8967 9215 . + 0 ID=cds-HJD61391.1;Parent=gene-LFV90_04455;Dbxref=NCBI_GP:HJD61391.1;Name=HJD61391.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004597596.1;locus_tag=LFV90_04455;product=DUF3035 domain-containing protein;protein_id=HJD61391.1;transl_table=11 DYDR01000006.1 tpg gene 9386 10762 . + . ID=gene-LFV90_04460;Name=murD;gbkey=Gene;gene=murD;gene_biotype=protein_coding;locus_tag=LFV90_04460 DYDR01000006.1 Protein Homology CDS 9386 10762 . + 0 ID=cds-HJD61392.1;Parent=gene-LFV90_04460;Dbxref=NCBI_GP:HJD61392.1;Name=HJD61392.1;gbkey=CDS;gene=murD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012151707.1;locus_tag=LFV90_04460;product=UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase;protein_id=HJD61392.1;transl_table=11 DYDR01000006.1 tpg gene 10891 11076 . + . ID=gene-LFV90_04465;Name=LFV90_04465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_04465 DYDR01000006.1 GeneMarkS-2+ CDS 10891 11076 . + 0 ID=cds-HJD61393.1;Parent=gene-LFV90_04465;Dbxref=NCBI_GP:HJD61393.1;Name=HJD61393.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_04465;product=hypothetical protein;protein_id=HJD61393.1;transl_table=11 DYDR01000006.1 tpg gene 11139 11327 . + . ID=gene-LFV90_04470;Name=LFV90_04470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_04470 DYDR01000006.1 GeneMarkS-2+ CDS 11139 11327 . + 0 ID=cds-HJD61394.1;Parent=gene-LFV90_04470;Dbxref=NCBI_GP:HJD61394.1;Name=HJD61394.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_04470;product=hypothetical protein;protein_id=HJD61394.1;transl_table=11 DYDR01000006.1 tpg gene 11551 12684 . + . ID=gene-LFV90_04475;Name=ftsW;gbkey=Gene;gene=ftsW;gene_biotype=protein_coding;locus_tag=LFV90_04475 DYDR01000006.1 Protein Homology CDS 11551 12684 . + 0 ID=cds-HJD61395.1;Parent=gene-LFV90_04475;Dbxref=NCBI_GP:HJD61395.1;Name=HJD61395.1;gbkey=CDS;gene=ftsW;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016916728.1;locus_tag=LFV90_04475;product=putative lipid II flippase FtsW;protein_id=HJD61395.1;transl_table=11 DYDR01000006.1 tpg gene 12681 13751 . + . ID=gene-LFV90_04480;Name=murG;gbkey=Gene;gene=murG;gene_biotype=protein_coding;locus_tag=LFV90_04480 DYDR01000006.1 Protein Homology CDS 12681 13751 . + 0 ID=cds-HJD61396.1;Parent=gene-LFV90_04480;Dbxref=NCBI_GP:HJD61396.1;Name=HJD61396.1;gbkey=CDS;gene=murG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477544.1;locus_tag=LFV90_04480;product=undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase;protein_id=HJD61396.1;transl_table=11 DYDR01000006.1 tpg gene 13888 14532 . + . ID=gene-LFV90_04485;Name=LFV90_04485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_04485 DYDR01000006.1 Protein Homology CDS 13888 14532 . + 0 ID=cds-HJD61397.1;Parent=gene-LFV90_04485;Dbxref=NCBI_GP:HJD61397.1;Name=HJD61397.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011270967.1;locus_tag=LFV90_04485;product=hypothetical protein;protein_id=HJD61397.1;transl_table=11 DYDR01000006.1 tpg pseudogene 14587 14646 . - . ID=gene-LFV90_04490;Name=LFV90_04490;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LFV90_04490;pseudo=true DYDR01000006.1 Protein Homology CDS 14587 14646 . - 0 ID=cds-LFV90_04490;Parent=gene-LFV90_04490;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR03777.1;locus_tag=LFV90_04490;product=palindromic element RPE4 domain-containing protein;pseudo=true;transl_table=11 DYDR01000006.1 tpg gene 15045 15224 . + . ID=gene-LFV90_04495;Name=LFV90_04495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_04495 DYDR01000006.1 Protein Homology CDS 15045 15224 . + 0 ID=cds-HJD61398.1;Parent=gene-LFV90_04495;Dbxref=NCBI_GP:HJD61398.1;Name=HJD61398.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012151659.1;locus_tag=LFV90_04495;product=hypothetical protein;protein_id=HJD61398.1;transl_table=11 DYDR01000006.1 tpg gene 15311 16057 . - . ID=gene-LFV90_04500;Name=LFV90_04500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_04500 DYDR01000006.1 Protein Homology CDS 15311 16057 . - 0 ID=cds-HJD61399.1;Parent=gene-LFV90_04500;Dbxref=NCBI_GP:HJD61399.1;Name=HJD61399.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477542.1;locus_tag=LFV90_04500;product=YaaA family protein;protein_id=HJD61399.1;transl_table=11 DYDR01000006.1 tpg gene 16058 16249 . - . ID=gene-LFV90_04505;Name=LFV90_04505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_04505 DYDR01000006.1 Protein Homology CDS 16058 16249 . - 0 ID=cds-HJD61400.1;Parent=gene-LFV90_04505;Dbxref=NCBI_GP:HJD61400.1;Name=HJD61400.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012150887.1;locus_tag=LFV90_04505;product=hypothetical protein;protein_id=HJD61400.1;transl_table=11 DYDR01000006.1 tpg gene 16513 16665 . + . ID=gene-LFV90_04510;Name=LFV90_04510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_04510 DYDR01000006.1 GeneMarkS-2+ CDS 16513 16665 . + 0 ID=cds-HJD61401.1;Parent=gene-LFV90_04510;Dbxref=NCBI_GP:HJD61401.1;Name=HJD61401.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_04510;product=hypothetical protein;protein_id=HJD61401.1;transl_table=11 DYDR01000006.1 tpg pseudogene 16673 17067 . + . ID=gene-LFV90_04515;Name=LFV90_04515;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LFV90_04515;pseudo=true DYDR01000006.1 Protein Homology CDS 16673 17067 . + 0 ID=cds-LFV90_04515;Parent=gene-LFV90_04515;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011190818.1;locus_tag=LFV90_04515;product=ABC transporter substrate-binding protein;pseudo=true;transl_table=11 DYDR01000006.1 tpg gene 17072 17857 . + . ID=gene-LFV90_04520;Name=LFV90_04520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_04520 DYDR01000006.1 Protein Homology CDS 17072 17857 . + 0 ID=cds-HJD61402.1;Parent=gene-LFV90_04520;Dbxref=NCBI_GP:HJD61402.1;Name=HJD61402.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016926171.1;locus_tag=LFV90_04520;product=ABC transporter permease;protein_id=HJD61402.1;transl_table=11 DYDR01000006.1 tpg pseudogene 17854 18582 . + . ID=gene-LFV90_04525;Name=LFV90_04525;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LFV90_04525;pseudo=true DYDR01000006.1 Protein Homology CDS 17854 18582 . + 0 ID=cds-LFV90_04525;Parent=gene-LFV90_04525;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477539.1;locus_tag=LFV90_04525;product=ATP-binding cassette domain-containing protein;pseudo=true;transl_table=11 DYDR01000006.1 tpg gene 18587 19108 . - . ID=gene-LFV90_04530;Name=LFV90_04530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_04530 DYDR01000006.1 Protein Homology CDS 18587 19108 . - 0 ID=cds-HJD61403.1;Parent=gene-LFV90_04530;Dbxref=NCBI_GP:HJD61403.1;Name=HJD61403.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477538.1;locus_tag=LFV90_04530;product=disulfide bond formation protein B;protein_id=HJD61403.1;transl_table=11 DYDR01000006.1 tpg gene 19343 20911 . + . ID=gene-LFV90_04535;Name=LFV90_04535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_04535 DYDR01000006.1 Protein Homology CDS 19343 20911 . + 0 ID=cds-HJD61404.1;Parent=gene-LFV90_04535;Dbxref=NCBI_GP:HJD61404.1;Name=HJD61404.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041471717.1;locus_tag=LFV90_04535;product=lysine--tRNA ligase;protein_id=HJD61404.1;transl_table=11 DYDR01000006.1 tpg gene 21007 21939 . + . ID=gene-LFV90_04540;Name=LFV90_04540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_04540 DYDR01000006.1 Protein Homology CDS 21007 21939 . + 0 ID=cds-HJD61405.1;Parent=gene-LFV90_04540;Dbxref=NCBI_GP:HJD61405.1;Name=HJD61405.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012736931.1;locus_tag=LFV90_04540;product=AEC family transporter;protein_id=HJD61405.1;transl_table=11 DYDR01000006.1 tpg gene 22059 24356 . + . ID=gene-LFV90_04545;Name=LFV90_04545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_04545 DYDR01000006.1 Protein Homology CDS 22059 24356 . + 0 ID=cds-HJD61406.1;Parent=gene-LFV90_04545;Dbxref=NCBI_GP:HJD61406.1;Name=HJD61406.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477535.1;locus_tag=LFV90_04545;product=NADP-dependent malic enzyme;protein_id=HJD61406.1;transl_table=11 DYDR01000006.1 tpg gene 24399 26414 . + . ID=gene-LFV90_04550;Name=ralF;gbkey=Gene;gene=ralF;gene_biotype=protein_coding;locus_tag=LFV90_04550 DYDR01000006.1 Protein Homology CDS 24399 26414 . + 0 ID=cds-HJD61407.1;Parent=gene-LFV90_04550;Dbxref=NCBI_GP:HJD61407.1;Name=HJD61407.1;Note=RalF%2C a virulence factor secreted by type IV secretion systems (T4SS)%2C is a guanine nucleotide exchange factor that acts on host cell ADP-ribosylation factors.;gbkey=CDS;gene=ralF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477534.1;locus_tag=LFV90_04550;product=T4SS guanine nucleotide exchange effector RalF;protein_id=HJD61407.1;transl_table=11 DYDR01000006.1 tpg gene 27031 27393 . - . ID=gene-LFV90_04555;Name=rnpA;gbkey=Gene;gene=rnpA;gene_biotype=protein_coding;locus_tag=LFV90_04555 DYDR01000006.1 Protein Homology CDS 27031 27393 . - 0 ID=cds-HJD61408.1;Parent=gene-LFV90_04555;Dbxref=NCBI_GP:HJD61408.1;Name=HJD61408.1;gbkey=CDS;gene=rnpA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477533.1;locus_tag=LFV90_04555;product=ribonuclease P protein component;protein_id=HJD61408.1;transl_table=11 DYDR01000006.1 tpg gene 27415 27549 . - . ID=gene-LFV90_04560;Name=rpmH;gbkey=Gene;gene=rpmH;gene_biotype=protein_coding;locus_tag=LFV90_04560 DYDR01000006.1 Protein Homology CDS 27415 27549 . - 0 ID=cds-HJD61409.1;Parent=gene-LFV90_04560;Dbxref=NCBI_GP:HJD61409.1;Name=HJD61409.1;gbkey=CDS;gene=rpmH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011508608.1;locus_tag=LFV90_04560;product=50S ribosomal protein L34;protein_id=HJD61409.1;transl_table=11 DYDR01000006.1 tpg gene 27695 28048 . - . ID=gene-LFV90_04565;Name=rplT;gbkey=Gene;gene=rplT;gene_biotype=protein_coding;locus_tag=LFV90_04565 DYDR01000006.1 Protein Homology CDS 27695 28048 . - 0 ID=cds-HJD61410.1;Parent=gene-LFV90_04565;Dbxref=NCBI_GP:HJD61410.1;Name=HJD61410.1;gbkey=CDS;gene=rplT;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011191043.1;locus_tag=LFV90_04565;product=50S ribosomal protein L20;protein_id=HJD61410.1;transl_table=11 DYDR01000006.1 tpg gene 28064 28270 . - . ID=gene-LFV90_04570;Name=rpmI;gbkey=Gene;gene=rpmI;gene_biotype=protein_coding;locus_tag=LFV90_04570 DYDR01000006.1 Protein Homology CDS 28064 28270 . - 0 ID=cds-HJD61411.1;Parent=gene-LFV90_04570;Dbxref=NCBI_GP:HJD61411.1;Name=HJD61411.1;gbkey=CDS;gene=rpmI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477530.1;locus_tag=LFV90_04570;product=50S ribosomal protein L35;protein_id=HJD61411.1;transl_table=11 DYDR01000006.1 tpg gene 28439 29116 . + . ID=gene-LFV90_04575;Name=LFV90_04575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_04575 DYDR01000006.1 Protein Homology CDS 28439 29116 . + 0 ID=cds-HJD61412.1;Parent=gene-LFV90_04575;Dbxref=NCBI_GP:HJD61412.1;Name=HJD61412.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004597956.1;locus_tag=LFV90_04575;product=7-carboxy-7-deazaguanine synthase QueE;protein_id=HJD61412.1;transl_table=11 DYDR01000006.1 tpg gene 29191 29799 . + . ID=gene-LFV90_04580;Name=LFV90_04580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_04580 DYDR01000006.1 Protein Homology CDS 29191 29799 . + 0 ID=cds-HJD61413.1;Parent=gene-LFV90_04580;Dbxref=NCBI_GP:HJD61413.1;Name=HJD61413.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477528.1;locus_tag=LFV90_04580;product=50S ribosomal protein L25/general stress protein Ctc;protein_id=HJD61413.1;transl_table=11 DYDR01000006.1 tpg gene 30270 30827 . + . ID=gene-LFV90_04585;Name=pth;gbkey=Gene;gene=pth;gene_biotype=protein_coding;locus_tag=LFV90_04585 DYDR01000006.1 Protein Homology CDS 30270 30827 . + 0 ID=cds-HJD61414.1;Parent=gene-LFV90_04585;Dbxref=NCBI_GP:HJD61414.1;Name=HJD61414.1;gbkey=CDS;gene=pth;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477527.1;locus_tag=LFV90_04585;product=aminoacyl-tRNA hydrolase;protein_id=HJD61414.1;transl_table=11 DYDR01000006.1 tpg gene 31172 31426 . + . ID=gene-LFV90_04590;Name=LFV90_04590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_04590 DYDR01000006.1 Protein Homology CDS 31172 31426 . + 0 ID=cds-HJD61415.1;Parent=gene-LFV90_04590;Dbxref=NCBI_GP:HJD61415.1;Name=HJD61415.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025054.2;locus_tag=LFV90_04590;product=GNAT family N-acetyltransferase;protein_id=HJD61415.1;transl_table=11 DYDR01000006.1 tpg gene 31437 32534 . + . ID=gene-LFV90_04595;Name=ychF;gbkey=Gene;gene=ychF;gene_biotype=protein_coding;locus_tag=LFV90_04595 DYDR01000006.1 Protein Homology CDS 31437 32534 . + 0 ID=cds-HJD61416.1;Parent=gene-LFV90_04595;Dbxref=NCBI_GP:HJD61416.1;Name=HJD61416.1;gbkey=CDS;gene=ychF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017442415.1;locus_tag=LFV90_04595;product=redox-regulated ATPase YchF;protein_id=HJD61416.1;transl_table=11 DYDR01000006.1 tpg pseudogene 32571 32639 . - . ID=gene-LFV90_04600;Name=LFV90_04600;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LFV90_04600;pseudo=true DYDR01000006.1 Protein Homology CDS 32571 32639 . - 0 ID=cds-LFV90_04600;Parent=gene-LFV90_04600;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR03777.1;locus_tag=LFV90_04600;product=palindromic element RPE4 domain-containing protein;pseudo=true;transl_table=11 DYDR01000006.1 tpg pseudogene 32735 33947 . + . ID=gene-LFV90_04605;Name=LFV90_04605;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LFV90_04605;pseudo=true DYDR01000006.1 Protein Homology CDS 32735 33947 . + 0 ID=cds-LFV90_04605;Parent=gene-LFV90_04605;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011191037.1;locus_tag=LFV90_04605;product=Bcr/CflA family efflux MFS transporter;pseudo=true;transl_table=11 DYDR01000006.1 tpg gene 34104 34367 . + . ID=gene-LFV90_04610;Name=LFV90_04610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_04610 DYDR01000006.1 Protein Homology CDS 34104 34367 . + 0 ID=cds-HJD61417.1;Parent=gene-LFV90_04610;Dbxref=NCBI_GP:HJD61417.1;Name=HJD61417.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014392447.1;locus_tag=LFV90_04610;product=type II toxin-antitoxin system RelB/DinJ family antitoxin;protein_id=HJD61417.1;transl_table=11 DYDR01000006.1 tpg pseudogene 34372 34626 . + . ID=gene-LFV90_04615;Name=LFV90_04615;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LFV90_04615;pseudo=true DYDR01000006.1 Protein Homology CDS 34372 34626 . + 0 ID=cds-LFV90_04615;Parent=gene-LFV90_04615;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013904578.1;locus_tag=LFV90_04615;product=type II toxin-antitoxin system YafQ family toxin;pseudo=true;transl_table=11 DYDR01000006.1 tpg gene 34704 36266 . - . ID=gene-LFV90_04620;Name=LFV90_04620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_04620 DYDR01000006.1 Protein Homology CDS 34704 36266 . - 0 ID=cds-HJD61418.1;Parent=gene-LFV90_04620;Dbxref=NCBI_GP:HJD61418.1;Name=HJD61418.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477521.1;locus_tag=LFV90_04620;product=Arp2/3 complex-activating protein rickA;protein_id=HJD61418.1;transl_table=11 DYDR01000006.1 tpg gene 36362 37447 . - . ID=gene-LFV90_04625;Name=mraY;gbkey=Gene;gene=mraY;gene_biotype=protein_coding;locus_tag=LFV90_04625 DYDR01000006.1 Protein Homology CDS 36362 37447 . - 0 ID=cds-HJD61419.1;Parent=gene-LFV90_04625;Dbxref=NCBI_GP:HJD61419.1;Name=HJD61419.1;gbkey=CDS;gene=mraY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017442402.1;locus_tag=LFV90_04625;product=phospho-N-acetylmuramoyl-pentapeptide-transferase;protein_id=HJD61419.1;transl_table=11 DYDR01000006.1 tpg gene 37480 38832 . - . ID=gene-LFV90_04630;Name=LFV90_04630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_04630 DYDR01000006.1 Protein Homology CDS 37480 38832 . - 0 ID=cds-HJD61420.1;Parent=gene-LFV90_04630;Dbxref=NCBI_GP:HJD61420.1;Name=HJD61420.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012151726.1;locus_tag=LFV90_04630;product=UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase;protein_id=HJD61420.1;transl_table=11 DYDR01000006.1 tpg gene 38993 40417 . - . ID=gene-LFV90_04635;Name=LFV90_04635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_04635 DYDR01000006.1 Protein Homology CDS 38993 40417 . - 0 ID=cds-HJD61421.1;Parent=gene-LFV90_04635;Dbxref=NCBI_GP:HJD61421.1;Name=HJD61421.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477518.1;locus_tag=LFV90_04635;product=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2%2C6-diaminopimelate ligase;protein_id=HJD61421.1;transl_table=11 DYDR01000006.1 tpg gene 40543 43920 . - . ID=gene-LFV90_04640;Name=mfd;gbkey=Gene;gene=mfd;gene_biotype=protein_coding;locus_tag=LFV90_04640 DYDR01000006.1 Protein Homology CDS 40543 43920 . - 0 ID=cds-HJD61422.1;Parent=gene-LFV90_04640;Dbxref=NCBI_GP:HJD61422.1;Name=HJD61422.1;gbkey=CDS;gene=mfd;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012719885.1;locus_tag=LFV90_04640;product=transcription-repair coupling factor;protein_id=HJD61422.1;transl_table=11 DYDR01000006.1 tpg gene 43934 44197 . - . ID=gene-LFV90_04645;Name=LFV90_04645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_04645 DYDR01000006.1 Protein Homology CDS 43934 44197 . - 0 ID=cds-HJD61423.1;Parent=gene-LFV90_04645;Dbxref=NCBI_GP:HJD61423.1;Name=HJD61423.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017442407.1;locus_tag=LFV90_04645;product=succinate dehydrogenase assembly factor 2;protein_id=HJD61423.1;transl_table=11 DYDR01000006.1 tpg pseudogene 44386 44769 . + . ID=gene-LFV90_04650;Name=LFV90_04650;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LFV90_04650;pseudo=true DYDR01000006.1 Protein Homology CDS 44386 44769 . + 0 ID=cds-LFV90_04650;Parent=gene-LFV90_04650;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016917638.1;locus_tag=LFV90_04650;product=rhodanese-like domain-containing protein;pseudo=true;transl_table=11 DYDR01000006.1 tpg gene 44770 46161 . + . ID=gene-LFV90_04655;Name=dnaA;gbkey=Gene;gene=dnaA;gene_biotype=protein_coding;locus_tag=LFV90_04655 DYDR01000006.1 Protein Homology CDS 44770 46161 . + 0 ID=cds-HJD61424.1;Parent=gene-LFV90_04655;Dbxref=NCBI_GP:HJD61424.1;Name=HJD61424.1;gbkey=CDS;gene=dnaA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012151731.1;locus_tag=LFV90_04655;product=chromosomal replication initiator protein DnaA;protein_id=HJD61424.1;transl_table=11 DYDR01000006.1 tpg gene 47506 47826 . - . ID=gene-LFV90_04660;Name=LFV90_04660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_04660 DYDR01000006.1 GeneMarkS-2+ CDS 47506 47826 . - 0 ID=cds-HJD61425.1;Parent=gene-LFV90_04660;Dbxref=NCBI_GP:HJD61425.1;Name=HJD61425.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_04660;product=hypothetical protein;protein_id=HJD61425.1;transl_table=11 DYDR01000006.1 tpg gene 48056 48508 . - . ID=gene-LFV90_04665;Name=LFV90_04665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_04665 DYDR01000006.1 GeneMarkS-2+ CDS 48056 48508 . - 0 ID=cds-HJD61426.1;Parent=gene-LFV90_04665;Dbxref=NCBI_GP:HJD61426.1;Name=HJD61426.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_04665;product=hypothetical protein;protein_id=HJD61426.1;transl_table=11 DYDR01000006.1 tpg gene 48661 48846 . - . ID=gene-LFV90_04670;Name=LFV90_04670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_04670 DYDR01000006.1 GeneMarkS-2+ CDS 48661 48846 . - 0 ID=cds-HJD61427.1;Parent=gene-LFV90_04670;Dbxref=NCBI_GP:HJD61427.1;Name=HJD61427.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_04670;product=hypothetical protein;protein_id=HJD61427.1;transl_table=11 DYDR01000006.1 tpg gene 49040 50548 . + . ID=gene-LFV90_04675;Name=LFV90_04675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_04675 DYDR01000006.1 Protein Homology CDS 49040 50548 . + 0 ID=cds-HJD61428.1;Parent=gene-LFV90_04675;Dbxref=NCBI_GP:HJD61428.1;Name=HJD61428.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012151734.1;locus_tag=LFV90_04675;product=patatin-like phospholipase family protein;protein_id=HJD61428.1;transl_table=11 DYDR01000006.1 tpg gene 51219 51839 . - . ID=gene-LFV90_04680;Name=rpsD;gbkey=Gene;gene=rpsD;gene_biotype=protein_coding;locus_tag=LFV90_04680 DYDR01000006.1 Protein Homology CDS 51219 51839 . - 0 ID=cds-HJD61429.1;Parent=gene-LFV90_04680;Dbxref=NCBI_GP:HJD61429.1;Name=HJD61429.1;gbkey=CDS;gene=rpsD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011190799.1;locus_tag=LFV90_04680;product=30S ribosomal protein S4;protein_id=HJD61429.1;transl_table=11 DYDR01000006.1 tpg gene 51957 52859 . + . ID=gene-LFV90_04685;Name=cyoE;gbkey=Gene;gene=cyoE;gene_biotype=protein_coding;locus_tag=LFV90_04685 DYDR01000006.1 Protein Homology CDS 51957 52859 . + 0 ID=cds-HJD61430.1;Parent=gene-LFV90_04685;Dbxref=NCBI_GP:HJD61430.1;Name=HJD61430.1;gbkey=CDS;gene=cyoE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014120700.1;locus_tag=LFV90_04685;product=heme o synthase;protein_id=HJD61430.1;transl_table=11 DYDR01000006.1 tpg gene 52957 53553 . + . ID=gene-LFV90_04690;Name=LFV90_04690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_04690 DYDR01000006.1 GeneMarkS-2+ CDS 52957 53553 . + 0 ID=cds-HJD61431.1;Parent=gene-LFV90_04690;Dbxref=NCBI_GP:HJD61431.1;Name=HJD61431.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_04690;product=hypothetical protein;protein_id=HJD61431.1;transl_table=11 DYDR01000006.1 tpg pseudogene 53801 54060 . - . ID=gene-LFV90_04695;Name=LFV90_04695;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LFV90_04695;pseudo=true DYDR01000006.1 Protein Homology CDS 53801 54060 . - 0 ID=cds-LFV90_04695;Parent=gene-LFV90_04695;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018476.2;locus_tag=LFV90_04695;product=Txe/YoeB family addiction module toxin;pseudo=true;transl_table=11 DYDR01000006.1 tpg gene 54098 54589 . - . ID=gene-LFV90_04700;Name=LFV90_04700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_04700 DYDR01000006.1 Protein Homology CDS 54098 54589 . - 0 ID=cds-HJD61432.1;Parent=gene-LFV90_04700;Dbxref=NCBI_GP:HJD61432.1;Name=HJD61432.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024671.2;locus_tag=LFV90_04700;product=DUF4065 domain-containing protein;protein_id=HJD61432.1;transl_table=11 DYDR01000006.1 tpg gene 54741 57266 . - . ID=gene-LFV90_04705;Name=LFV90_04705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_04705 DYDR01000006.1 Protein Homology CDS 54741 57266 . - 0 ID=cds-HJD61433.1;Parent=gene-LFV90_04705;Dbxref=NCBI_GP:HJD61433.1;Name=HJD61433.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012150675.1;locus_tag=LFV90_04705;product=AsmA family protein;protein_id=HJD61433.1;transl_table=11 DYDR01000006.1 tpg gene 57294 57791 . - . ID=gene-LFV90_04710;Name=LFV90_04710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_04710 DYDR01000006.1 Protein Homology CDS 57294 57791 . - 0 ID=cds-HJD61434.1;Parent=gene-LFV90_04710;Dbxref=NCBI_GP:HJD61434.1;Name=HJD61434.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004599375.1;locus_tag=LFV90_04710;product=Hsp20/alpha crystallin family protein;protein_id=HJD61434.1;transl_table=11 DYDR01000006.1 tpg gene 58140 58448 . - . ID=gene-LFV90_04715;Name=LFV90_04715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_04715 DYDR01000006.1 Protein Homology CDS 58140 58448 . - 0 ID=cds-HJD61435.1;Parent=gene-LFV90_04715;Dbxref=NCBI_GP:HJD61435.1;Name=HJD61435.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014366049.1;locus_tag=LFV90_04715;product=hypothetical protein;protein_id=HJD61435.1;transl_table=11 DYDR01000006.1 tpg gene 58879 59631 . + . ID=gene-LFV90_04720;Name=LFV90_04720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_04720 DYDR01000006.1 Protein Homology CDS 58879 59631 . + 0 ID=cds-HJD61436.1;Parent=gene-LFV90_04720;Dbxref=NCBI_GP:HJD61436.1;Name=HJD61436.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF037547.2;locus_tag=LFV90_04720;product=DUF5410 domain-containing protein;protein_id=HJD61436.1;transl_table=11 DYDR01000006.1 tpg gene 59685 60110 . + . ID=gene-LFV90_04725;Name=LFV90_04725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_04725 DYDR01000006.1 GeneMarkS-2+ CDS 59685 60110 . + 0 ID=cds-HJD61437.1;Parent=gene-LFV90_04725;Dbxref=NCBI_GP:HJD61437.1;Name=HJD61437.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_04725;product=hypothetical protein;protein_id=HJD61437.1;transl_table=11 DYDR01000006.1 tpg gene 60424 61179 . - . ID=gene-LFV90_04730;Name=LFV90_04730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_04730 DYDR01000006.1 Protein Homology CDS 60424 61179 . - 0 ID=cds-HJD61438.1;Parent=gene-LFV90_04730;Dbxref=NCBI_GP:HJD61438.1;Name=HJD61438.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012719530.1;locus_tag=LFV90_04730;product=cytochrome c1;protein_id=HJD61438.1;transl_table=11 DYDR01000006.1 tpg gene 61211 61288 . - . ID=gene-LFV90_04735;Name=LFV90_04735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_04735 DYDR01000006.1 Protein Homology CDS 61211 61288 . - 0 ID=cds-HJD61439.1;Parent=gene-LFV90_04735;Dbxref=NCBI_GP:HJD61439.1;Name=HJD61439.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR03777.1;locus_tag=LFV90_04735;product=hypothetical protein;protein_id=HJD61439.1;transl_table=11 DYDR01000006.1 tpg gene 61494 62696 . - . ID=gene-LFV90_04740;Name=LFV90_04740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_04740 DYDR01000006.1 Protein Homology CDS 61494 62696 . - 0 ID=cds-HJD61440.1;Parent=gene-LFV90_04740;Dbxref=NCBI_GP:HJD61440.1;Name=HJD61440.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016945555.1;locus_tag=LFV90_04740;product=cytochrome b/b6;protein_id=HJD61440.1;transl_table=11 DYDR01000006.1 tpg gene 62703 63263 . - . ID=gene-LFV90_04745;Name=petA;gbkey=Gene;gene=petA;gene_biotype=protein_coding;locus_tag=LFV90_04745 DYDR01000006.1 Protein Homology CDS 62703 63263 . - 0 ID=cds-HJD61441.1;Parent=gene-LFV90_04745;Dbxref=NCBI_GP:HJD61441.1;Name=HJD61441.1;gbkey=CDS;gene=petA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012152012.1;locus_tag=LFV90_04745;product=ubiquinol-cytochrome c reductase iron-sulfur subunit;protein_id=HJD61441.1;transl_table=11 DYDR01000006.1 tpg gene 63266 63709 . - . ID=gene-LFV90_04750;Name=LFV90_04750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_04750 DYDR01000006.1 Protein Homology CDS 63266 63709 . - 0 ID=cds-HJD61442.1;Parent=gene-LFV90_04750;Dbxref=NCBI_GP:HJD61442.1;Name=HJD61442.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012152011.1;locus_tag=LFV90_04750;product=DUF2670 domain-containing protein;protein_id=HJD61442.1;transl_table=11 DYDR01000006.1 tpg gene 63777 64424 . - . ID=gene-LFV90_04755;Name=LFV90_04755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_04755 DYDR01000006.1 Protein Homology CDS 63777 64424 . - 0 ID=cds-HJD61443.1;Parent=gene-LFV90_04755;Dbxref=NCBI_GP:HJD61443.1;Name=HJD61443.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004996266.1;locus_tag=LFV90_04755;product=heme exporter protein CcmB;protein_id=HJD61443.1;transl_table=11 DYDR01000006.1 tpg gene 64417 65457 . - . ID=gene-LFV90_04760;Name=LFV90_04760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_04760 DYDR01000006.1 Protein Homology CDS 64417 65457 . - 0 ID=cds-HJD61444.1;Parent=gene-LFV90_04760;Dbxref=NCBI_GP:HJD61444.1;Name=HJD61444.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012152009.1;locus_tag=LFV90_04760;product=DUF4040 domain-containing protein;protein_id=HJD61444.1;transl_table=11 DYDR01000006.1 tpg gene 65468 65779 . - . ID=gene-LFV90_04765;Name=LFV90_04765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_04765 DYDR01000006.1 Protein Homology CDS 65468 65779 . - 0 ID=cds-HJD61445.1;Parent=gene-LFV90_04765;Dbxref=NCBI_GP:HJD61445.1;Name=HJD61445.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477492.1;locus_tag=LFV90_04765;product=Na+/H+ antiporter subunit G;protein_id=HJD61445.1;transl_table=11 DYDR01000006.1 tpg gene 66088 67620 . - . ID=gene-LFV90_04770;Name=LFV90_04770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_04770 DYDR01000006.1 Protein Homology CDS 66088 67620 . - 0 ID=cds-HJD61446.1;Parent=gene-LFV90_04770;Dbxref=NCBI_GP:HJD61446.1;Name=HJD61446.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016926135.1;locus_tag=LFV90_04770;product=HlyD family type I secretion periplasmic adaptor subunit;protein_id=HJD61446.1;transl_table=11 DYDR01000006.1 tpg gene 67753 69510 . - . ID=gene-LFV90_04775;Name=LFV90_04775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_04775 DYDR01000006.1 Protein Homology CDS 67753 69510 . - 0 ID=cds-HJD61447.1;Parent=gene-LFV90_04775;Dbxref=NCBI_GP:HJD61447.1;Name=HJD61447.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012152005.1;locus_tag=LFV90_04775;product=type I secretion system permease/ATPase;protein_id=HJD61447.1;transl_table=11 DYDR01000006.1 tpg gene 69521 70537 . - . ID=gene-LFV90_04780;Name=asd;gbkey=Gene;gene=asd;gene_biotype=protein_coding;locus_tag=LFV90_04780 DYDR01000006.1 Protein Homology CDS 69521 70537 . - 0 ID=cds-HJD61448.1;Parent=gene-LFV90_04780;Dbxref=NCBI_GP:HJD61448.1;Name=HJD61448.1;gbkey=CDS;gene=asd;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017443133.1;locus_tag=LFV90_04780;product=aspartate-semialdehyde dehydrogenase;protein_id=HJD61448.1;transl_table=11 DYDR01000006.1 tpg gene 70540 70893 . - . ID=gene-LFV90_04785;Name=LFV90_04785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_04785 DYDR01000006.1 Protein Homology CDS 70540 70893 . - 0 ID=cds-HJD61449.1;Parent=gene-LFV90_04785;Dbxref=NCBI_GP:HJD61449.1;Name=HJD61449.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477487.1;locus_tag=LFV90_04785;product=HIT domain-containing protein;protein_id=HJD61449.1;transl_table=11 DYDR01000006.1 tpg gene 70883 71239 . - . ID=gene-LFV90_04790;Name=LFV90_04790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_04790 DYDR01000006.1 Protein Homology CDS 70883 71239 . - 0 ID=cds-HJD61450.1;Parent=gene-LFV90_04790;Dbxref=NCBI_GP:HJD61450.1;Name=HJD61450.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477486.1;locus_tag=LFV90_04790;product=DUF2628 domain-containing protein;protein_id=HJD61450.1;transl_table=11 DYDR01000006.1 tpg gene 71375 71923 . + . ID=gene-LFV90_04795;Name=hslV;gbkey=Gene;gene=hslV;gene_biotype=protein_coding;locus_tag=LFV90_04795 DYDR01000006.1 Protein Homology CDS 71375 71923 . + 0 ID=cds-HJD61451.1;Parent=gene-LFV90_04795;Dbxref=NCBI_GP:HJD61451.1;Name=HJD61451.1;gbkey=CDS;gene=hslV;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017443137.1;locus_tag=LFV90_04795;product=ATP-dependent protease subunit HslV;protein_id=HJD61451.1;transl_table=11 DYDR01000006.1 tpg gene 71920 73278 . + . ID=gene-LFV90_04800;Name=hslU;gbkey=Gene;gene=hslU;gene_biotype=protein_coding;locus_tag=LFV90_04800 DYDR01000006.1 Protein Homology CDS 71920 73278 . + 0 ID=cds-HJD61452.1;Parent=gene-LFV90_04800;Dbxref=NCBI_GP:HJD61452.1;Name=HJD61452.1;gbkey=CDS;gene=hslU;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011190774.1;locus_tag=LFV90_04800;product=ATP-dependent protease ATPase subunit HslU;protein_id=HJD61452.1;transl_table=11 DYDR01000006.1 tpg pseudogene 73314 74829 . + . ID=gene-LFV90_04805;Name=LFV90_04805;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LFV90_04805;pseudo=true DYDR01000006.1 Protein Homology CDS 73314 74829 . + 0 ID=cds-LFV90_04805;Parent=gene-LFV90_04805;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477483.1;locus_tag=LFV90_04805;product=YifB family Mg chelatase-like AAA ATPase;pseudo=true;transl_table=11 DYDR01000006.1 tpg pseudogene 74976 75776 . + . ID=gene-LFV90_04810;Name=LFV90_04810;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LFV90_04810;pseudo=true DYDR01000006.1 Protein Homology CDS 74976 75776 . + 0 ID=cds-LFV90_04810;Parent=gene-LFV90_04810;Note=internal stop;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024194.2;locus_tag=LFV90_04810;product=Rpn family recombination-promoting nuclease/putative transposase;pseudo=true;transl_table=11 DYDR01000006.1 tpg gene 75796 76938 . + . ID=gene-LFV90_04815;Name=lpxB;gbkey=Gene;gene=lpxB;gene_biotype=protein_coding;locus_tag=LFV90_04815 DYDR01000006.1 Protein Homology CDS 75796 76938 . + 0 ID=cds-HJD61453.1;Parent=gene-LFV90_04815;Dbxref=NCBI_GP:HJD61453.1;Name=HJD61453.1;gbkey=CDS;gene=lpxB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477480.1;locus_tag=LFV90_04815;product=lipid-A-disaccharide synthase;protein_id=HJD61453.1;transl_table=11 DYDR01000006.1 tpg gene 76930 77223 . - . ID=gene-LFV90_04820;Name=LFV90_04820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_04820 DYDR01000006.1 Protein Homology CDS 76930 77223 . - 0 ID=cds-HJD61454.1;Parent=gene-LFV90_04820;Dbxref=NCBI_GP:HJD61454.1;Name=HJD61454.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477479.1;locus_tag=LFV90_04820;product=hypothetical protein;protein_id=HJD61454.1;transl_table=11 DYDR01000006.1 tpg gene 77651 78667 . + . ID=gene-LFV90_04825;Name=mltG;gbkey=Gene;gene=mltG;gene_biotype=protein_coding;locus_tag=LFV90_04825 DYDR01000006.1 Protein Homology CDS 77651 78667 . + 0 ID=cds-HJD61455.1;Parent=gene-LFV90_04825;Dbxref=NCBI_GP:HJD61455.1;Name=HJD61455.1;gbkey=CDS;gene=mltG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012151999.1;locus_tag=LFV90_04825;product=endolytic transglycosylase MltG;protein_id=HJD61455.1;transl_table=11 DYDR01000006.1 tpg gene 78664 78954 . + . ID=gene-LFV90_04830;Name=cyaY;gbkey=Gene;gene=cyaY;gene_biotype=protein_coding;locus_tag=LFV90_04830 DYDR01000006.1 Protein Homology CDS 78664 78954 . + 0 ID=cds-HJD61456.1;Parent=gene-LFV90_04830;Dbxref=NCBI_GP:HJD61456.1;Name=HJD61456.1;gbkey=CDS;gene=cyaY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477477.1;locus_tag=LFV90_04830;product=iron donor protein CyaY;protein_id=HJD61456.1;transl_table=11 DYDR01000006.1 tpg gene 78959 80527 . - . ID=gene-LFV90_04835;Name=LFV90_04835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_04835 DYDR01000006.1 Protein Homology CDS 78959 80527 . - 0 ID=cds-HJD61457.1;Parent=gene-LFV90_04835;Dbxref=NCBI_GP:HJD61457.1;Name=HJD61457.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017443153.1;locus_tag=LFV90_04835;product=phosphoethanolamine transferase;protein_id=HJD61457.1;transl_table=11 DYDR01000006.1 tpg gene 80569 81033 . + . ID=gene-LFV90_04840;Name=ruvX;gbkey=Gene;gene=ruvX;gene_biotype=protein_coding;locus_tag=LFV90_04840 DYDR01000006.1 Protein Homology CDS 80569 81033 . + 0 ID=cds-HJD61458.1;Parent=gene-LFV90_04840;Dbxref=NCBI_GP:HJD61458.1;Name=HJD61458.1;gbkey=CDS;gene=ruvX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012149427.1;locus_tag=LFV90_04840;product=Holliday junction resolvase RuvX;protein_id=HJD61458.1;transl_table=11 DYDR01000006.1 tpg gene 81122 81763 . + . ID=gene-LFV90_04845;Name=LFV90_04845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_04845 DYDR01000006.1 Protein Homology CDS 81122 81763 . + 0 ID=cds-HJD61459.1;Parent=gene-LFV90_04845;Dbxref=NCBI_GP:HJD61459.1;Name=HJD61459.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012151998.1;locus_tag=LFV90_04845;product=HD domain-containing protein;protein_id=HJD61459.1;transl_table=11 DYDR01000006.1 tpg gene 81765 83072 . - . ID=gene-LFV90_04850;Name=LFV90_04850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_04850 DYDR01000006.1 Protein Homology CDS 81765 83072 . - 0 ID=cds-HJD61460.1;Parent=gene-LFV90_04850;Dbxref=NCBI_GP:HJD61460.1;Name=HJD61460.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477473.1;locus_tag=LFV90_04850;product=MFS transporter;protein_id=HJD61460.1;transl_table=11 DYDR01000006.1 tpg gene 83140 84432 . - . ID=gene-LFV90_04855;Name=LFV90_04855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_04855 DYDR01000006.1 Protein Homology CDS 83140 84432 . - 0 ID=cds-HJD61461.1;Parent=gene-LFV90_04855;Dbxref=NCBI_GP:HJD61461.1;Name=HJD61461.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477472.1;locus_tag=LFV90_04855;product=proline--tRNA ligase;protein_id=HJD61461.1;transl_table=11 DYDR01000006.1 tpg gene 84559 85137 . - . ID=gene-LFV90_04860;Name=folE;gbkey=Gene;gene=folE;gene_biotype=protein_coding;locus_tag=LFV90_04860 DYDR01000006.1 Protein Homology CDS 84559 85137 . - 0 ID=cds-HJD61462.1;Parent=gene-LFV90_04860;Dbxref=NCBI_GP:HJD61462.1;Name=HJD61462.1;gbkey=CDS;gene=folE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477471.1;locus_tag=LFV90_04860;product=GTP cyclohydrolase I FolE;protein_id=HJD61462.1;transl_table=11 DYDR01000006.1 tpg gene 85127 86635 . - . ID=gene-LFV90_04865;Name=LFV90_04865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_04865 DYDR01000006.1 Protein Homology CDS 85127 86635 . - 0 ID=cds-HJD61463.1;Parent=gene-LFV90_04865;Dbxref=NCBI_GP:HJD61463.1;Name=HJD61463.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011270928.1;locus_tag=LFV90_04865;product=hypothetical protein;protein_id=HJD61463.1;transl_table=11 DYDR01000006.1 tpg gene 87174 88175 . - . ID=gene-LFV90_04870;Name=LFV90_04870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_04870 DYDR01000006.1 Protein Homology CDS 87174 88175 . - 0 ID=cds-HJD61464.1;Parent=gene-LFV90_04870;Dbxref=NCBI_GP:HJD61464.1;Name=HJD61464.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012151993.1;locus_tag=LFV90_04870;product=serine/threonine dehydratase;protein_id=HJD61464.1;transl_table=11 DYDR01000006.1 tpg gene 88255 90582 . + . ID=gene-LFV90_04875;Name=lon;gbkey=Gene;gene=lon;gene_biotype=protein_coding;locus_tag=LFV90_04875 DYDR01000006.1 Protein Homology CDS 88255 90582 . + 0 ID=cds-HJD61465.1;Parent=gene-LFV90_04875;Dbxref=NCBI_GP:HJD61465.1;Name=HJD61465.1;gbkey=CDS;gene=lon;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012151992.1;locus_tag=LFV90_04875;product=endopeptidase La;protein_id=HJD61465.1;transl_table=11 DYDR01000006.1 tpg gene 91387 94086 . + . ID=gene-LFV90_04880;Name=gyrA;gbkey=Gene;gene=gyrA;gene_biotype=protein_coding;locus_tag=LFV90_04880 DYDR01000006.1 Protein Homology CDS 91387 94086 . + 0 ID=cds-HJD61466.1;Parent=gene-LFV90_04880;Dbxref=NCBI_GP:HJD61466.1;Name=HJD61466.1;gbkey=CDS;gene=gyrA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477462.1;locus_tag=LFV90_04880;product=DNA topoisomerase (ATP-hydrolyzing) subunit A;protein_id=HJD61466.1;transl_table=11 DYDR01000006.1 tpg gene 94615 94905 . + . ID=gene-LFV90_04885;Name=LFV90_04885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_04885 DYDR01000006.1 GeneMarkS-2+ CDS 94615 94905 . + 0 ID=cds-HJD61467.1;Parent=gene-LFV90_04885;Dbxref=NCBI_GP:HJD61467.1;Name=HJD61467.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_04885;product=hypothetical protein;protein_id=HJD61467.1;transl_table=11 DYDR01000006.1 tpg gene 95025 95264 . + . ID=gene-LFV90_04890;Name=LFV90_04890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_04890 DYDR01000006.1 GeneMarkS-2+ CDS 95025 95264 . + 0 ID=cds-HJD61468.1;Parent=gene-LFV90_04890;Dbxref=NCBI_GP:HJD61468.1;Name=HJD61468.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_04890;product=hypothetical protein;protein_id=HJD61468.1;transl_table=11 DYDR01000006.1 tpg gene 95261 95641 . + . ID=gene-LFV90_04895;Name=LFV90_04895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_04895 DYDR01000006.1 GeneMarkS-2+ CDS 95261 95641 . + 0 ID=cds-HJD61469.1;Parent=gene-LFV90_04895;Dbxref=NCBI_GP:HJD61469.1;Name=HJD61469.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_04895;product=hypothetical protein;protein_id=HJD61469.1;transl_table=11 DYDR01000006.1 tpg gene 95952 96170 . + . ID=gene-LFV90_04900;Name=LFV90_04900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_04900 DYDR01000006.1 GeneMarkS-2+ CDS 95952 96170 . + 0 ID=cds-HJD61470.1;Parent=gene-LFV90_04900;Dbxref=NCBI_GP:HJD61470.1;Name=HJD61470.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_04900;product=hypothetical protein;protein_id=HJD61470.1;transl_table=11 DYDR01000006.1 tpg gene 96273 96428 . + . ID=gene-LFV90_04905;Name=LFV90_04905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_04905 DYDR01000006.1 GeneMarkS-2+ CDS 96273 96428 . + 0 ID=cds-HJD61471.1;Parent=gene-LFV90_04905;Dbxref=NCBI_GP:HJD61471.1;Name=HJD61471.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_04905;product=hypothetical protein;protein_id=HJD61471.1;transl_table=11 DYDR01000006.1 tpg gene 96539 97030 . + . ID=gene-LFV90_04910;Name=LFV90_04910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_04910 DYDR01000006.1 GeneMarkS-2+ CDS 96539 97030 . + 0 ID=cds-HJD61472.1;Parent=gene-LFV90_04910;Dbxref=NCBI_GP:HJD61472.1;Name=HJD61472.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_04910;product=hypothetical protein;protein_id=HJD61472.1;transl_table=11 DYDR01000006.1 tpg gene 97034 97762 . + . ID=gene-LFV90_04915;Name=LFV90_04915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_04915 DYDR01000006.1 GeneMarkS-2+ CDS 97034 97762 . + 0 ID=cds-HJD61473.1;Parent=gene-LFV90_04915;Dbxref=NCBI_GP:HJD61473.1;Name=HJD61473.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_04915;product=tetratricopeptide repeat protein;protein_id=HJD61473.1;transl_table=11 DYDR01000006.1 tpg gene 97749 98045 . + . ID=gene-LFV90_04920;Name=LFV90_04920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_04920 DYDR01000006.1 GeneMarkS-2+ CDS 97749 98045 . + 0 ID=cds-HJD61474.1;Parent=gene-LFV90_04920;Dbxref=NCBI_GP:HJD61474.1;Name=HJD61474.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_04920;product=hypothetical protein;protein_id=HJD61474.1;transl_table=11 DYDR01000006.1 tpg gene 98150 99208 . - . ID=gene-LFV90_04925;Name=LFV90_04925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_04925 DYDR01000006.1 Protein Homology CDS 98150 99208 . - 0 ID=cds-HJD61475.1;Parent=gene-LFV90_04925;Dbxref=NCBI_GP:HJD61475.1;Name=HJD61475.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF039471.1;locus_tag=LFV90_04925;product=DUF6492 family protein;protein_id=HJD61475.1;transl_table=11 DYDR01000006.1 tpg gene 99205 100209 . - . ID=gene-LFV90_04930;Name=LFV90_04930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_04930 DYDR01000006.1 Protein Homology CDS 99205 100209 . - 0 ID=cds-HJD61476.1;Parent=gene-LFV90_04930;Dbxref=NCBI_GP:HJD61476.1;Name=HJD61476.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013048.2;locus_tag=LFV90_04930;product=glycosyltransferase family 10;protein_id=HJD61476.1;transl_table=11 DYDR01000006.1 tpg gene 100241 101350 . - . ID=gene-LFV90_04935;Name=LFV90_04935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_04935 DYDR01000006.1 Protein Homology CDS 100241 101350 . - 0 ID=cds-HJD61477.1;Parent=gene-LFV90_04935;Dbxref=NCBI_GP:HJD61477.1;Name=HJD61477.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013227.2;locus_tag=LFV90_04935;product=DegT/DnrJ/EryC1/StrS family aminotransferase;protein_id=HJD61477.1;transl_table=11 DYDR01000006.1 tpg gene 101332 101733 . - . ID=gene-LFV90_04940;Name=LFV90_04940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_04940 DYDR01000006.1 Protein Homology CDS 101332 101733 . - 0 ID=cds-HJD61478.1;Parent=gene-LFV90_04940;Dbxref=NCBI_GP:HJD61478.1;Name=HJD61478.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017345.2;locus_tag=LFV90_04940;product=FdtA/QdtA family cupin domain-containing protein;protein_id=HJD61478.1;transl_table=11 DYDR01000006.1 tpg gene 101708 102724 . - . ID=gene-LFV90_04945;Name=rfbB;gbkey=Gene;gene=rfbB;gene_biotype=protein_coding;locus_tag=LFV90_04945 DYDR01000006.1 Protein Homology CDS 101708 102724 . - 0 ID=cds-HJD61479.1;Parent=gene-LFV90_04945;Dbxref=NCBI_GP:HJD61479.1;Name=HJD61479.1;gbkey=CDS;gene=rfbB;inference=COORDINATES: protein motif:HMM:TIGR01181.1;locus_tag=LFV90_04945;product=dTDP-glucose 4%2C6-dehydratase;protein_id=HJD61479.1;transl_table=11 DYDR01000006.1 tpg gene 102753 103652 . - . ID=gene-LFV90_04950;Name=rfbA;gbkey=Gene;gene=rfbA;gene_biotype=protein_coding;locus_tag=LFV90_04950 DYDR01000006.1 Protein Homology CDS 102753 103652 . - 0 ID=cds-HJD61480.1;Parent=gene-LFV90_04950;Dbxref=NCBI_GP:HJD61480.1;Name=HJD61480.1;gbkey=CDS;gene=rfbA;inference=COORDINATES: protein motif:HMM:TIGR01207.1;locus_tag=LFV90_04950;product=glucose-1-phosphate thymidylyltransferase RfbA;protein_id=HJD61480.1;transl_table=11 DYDR01000006.1 tpg gene 103725 105251 . - . ID=gene-LFV90_04955;Name=LFV90_04955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_04955 DYDR01000006.1 Protein Homology CDS 103725 105251 . - 0 ID=cds-HJD61481.1;Parent=gene-LFV90_04955;Dbxref=NCBI_GP:HJD61481.1;Name=HJD61481.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016464.2;locus_tag=LFV90_04955;product=glycosyltransferase family 61 protein;protein_id=HJD61481.1;transl_table=11 DYDR01000006.1 tpg gene 105573 106130 . + . ID=gene-LFV90_04960;Name=LFV90_04960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_04960 DYDR01000006.1 Protein Homology CDS 105573 106130 . + 0 ID=cds-HJD61482.1;Parent=gene-LFV90_04960;Dbxref=NCBI_GP:HJD61482.1;Name=HJD61482.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024698.2;locus_tag=LFV90_04960;product=GNAT family N-acetyltransferase;protein_id=HJD61482.1;transl_table=11 DYDR01000006.1 tpg gene 106213 106302 . - . ID=gene-LFV90_04965;Name=LFV90_04965;gbkey=Gene;gene_biotype=tRNA;locus_tag=LFV90_04965 DYDR01000006.1 tRNAscan-SE tRNA 106213 106302 . - . ID=rna-LFV90_04965;Parent=gene-LFV90_04965;anticodon=(pos:complement(106266..106268));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=LFV90_04965;product=tRNA-Ser DYDR01000006.1 tRNAscan-SE exon 106213 106302 . - . ID=exon-LFV90_04965-1;Parent=rna-LFV90_04965;anticodon=(pos:complement(106266..106268));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=LFV90_04965;product=tRNA-Ser DYDR01000006.1 tpg gene 106563 107555 . - . ID=gene-LFV90_04970;Name=trpS;gbkey=Gene;gene=trpS;gene_biotype=protein_coding;locus_tag=LFV90_04970 DYDR01000006.1 Protein Homology CDS 106563 107555 . - 0 ID=cds-HJD61483.1;Parent=gene-LFV90_04970;Dbxref=NCBI_GP:HJD61483.1;Name=HJD61483.1;gbkey=CDS;gene=trpS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011190913.1;locus_tag=LFV90_04970;product=tryptophan--tRNA ligase;protein_id=HJD61483.1;transl_table=11 DYDR01000006.1 tpg gene 107754 108479 . + . ID=gene-LFV90_04975;Name=LFV90_04975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_04975 DYDR01000006.1 Protein Homology CDS 107754 108479 . + 0 ID=cds-HJD61484.1;Parent=gene-LFV90_04975;Dbxref=NCBI_GP:HJD61484.1;Name=HJD61484.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017442879.1;locus_tag=LFV90_04975;product=1-acyl-sn-glycerol-3-phosphate acyltransferase;protein_id=HJD61484.1;transl_table=11 DYDR01000006.1 tpg gene 108593 109033 . + . ID=gene-LFV90_04980;Name=LFV90_04980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_04980 DYDR01000006.1 Protein Homology CDS 108593 109033 . + 0 ID=cds-HJD61485.1;Parent=gene-LFV90_04980;Dbxref=NCBI_GP:HJD61485.1;Name=HJD61485.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014412664.1;locus_tag=LFV90_04980;product=host attachment protein;protein_id=HJD61485.1;transl_table=11 DYDR01000006.1 tpg gene 109245 109952 . + . ID=gene-LFV90_04985;Name=LFV90_04985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_04985 DYDR01000006.1 Protein Homology CDS 109245 109952 . + 0 ID=cds-HJD61486.1;Parent=gene-LFV90_04985;Dbxref=NCBI_GP:HJD61486.1;Name=HJD61486.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014120860.1;locus_tag=LFV90_04985;product=alpha/beta hydrolase;protein_id=HJD61486.1;transl_table=11 DYDR01000006.1 tpg gene 110089 110703 . - . ID=gene-LFV90_04990;Name=LFV90_04990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_04990 DYDR01000006.1 GeneMarkS-2+ CDS 110089 110703 . - 0 ID=cds-HJD61487.1;Parent=gene-LFV90_04990;Dbxref=NCBI_GP:HJD61487.1;Name=HJD61487.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_04990;product=hypothetical protein;protein_id=HJD61487.1;transl_table=11 DYDR01000006.1 tpg gene 111028 111195 . - . ID=gene-LFV90_04995;Name=LFV90_04995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_04995 DYDR01000006.1 GeneMarkS-2+ CDS 111028 111195 . - 0 ID=cds-HJD61488.1;Parent=gene-LFV90_04995;Dbxref=NCBI_GP:HJD61488.1;Name=HJD61488.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_04995;product=hypothetical protein;protein_id=HJD61488.1;transl_table=11 DYDR01000006.1 tpg gene 111752 111889 . + . ID=gene-LFV90_05000;Name=LFV90_05000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_05000 DYDR01000006.1 GeneMarkS-2+ CDS 111752 111889 . + 0 ID=cds-HJD61489.1;Parent=gene-LFV90_05000;Dbxref=NCBI_GP:HJD61489.1;Name=HJD61489.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_05000;product=hypothetical protein;protein_id=HJD61489.1;transl_table=11 DYDR01000006.1 tpg gene 112152 112571 . - . ID=gene-LFV90_05005;Name=LFV90_05005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_05005 DYDR01000006.1 GeneMarkS-2+ CDS 112152 112571 . - 0 ID=cds-HJD61490.1;Parent=gene-LFV90_05005;Dbxref=NCBI_GP:HJD61490.1;Name=HJD61490.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_05005;product=hypothetical protein;protein_id=HJD61490.1;transl_table=11 DYDR01000006.1 tpg gene 112593 112871 . - . ID=gene-LFV90_05010;Name=LFV90_05010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_05010 DYDR01000006.1 GeneMarkS-2+ CDS 112593 112871 . - 0 ID=cds-HJD61491.1;Parent=gene-LFV90_05010;Dbxref=NCBI_GP:HJD61491.1;Name=HJD61491.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_05010;product=hypothetical protein;protein_id=HJD61491.1;transl_table=11 DYDR01000006.1 tpg gene 112885 113328 . - . ID=gene-LFV90_05015;Name=LFV90_05015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_05015 DYDR01000006.1 GeneMarkS-2+ CDS 112885 113328 . - 0 ID=cds-HJD61492.1;Parent=gene-LFV90_05015;Dbxref=NCBI_GP:HJD61492.1;Name=HJD61492.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_05015;product=hypothetical protein;protein_id=HJD61492.1;transl_table=11 DYDR01000006.1 tpg gene 113378 113605 . - . ID=gene-LFV90_05020;Name=LFV90_05020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_05020 DYDR01000006.1 GeneMarkS-2+ CDS 113378 113605 . - 0 ID=cds-HJD61493.1;Parent=gene-LFV90_05020;Dbxref=NCBI_GP:HJD61493.1;Name=HJD61493.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_05020;product=hypothetical protein;protein_id=HJD61493.1;transl_table=11 DYDR01000006.1 tpg gene 113918 114748 . - . ID=gene-LFV90_05025;Name=LFV90_05025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_05025 DYDR01000006.1 Protein Homology CDS 113918 114748 . - 0 ID=cds-HJD61494.1;Parent=gene-LFV90_05025;Dbxref=NCBI_GP:HJD61494.1;Name=HJD61494.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012151983.1;locus_tag=LFV90_05025;product=biotin--[acetyl-CoA-carboxylase] ligase;protein_id=HJD61494.1;transl_table=11 DYDR01000006.1 tpg gene 114755 116137 . - . ID=gene-LFV90_05030;Name=nuoN;gbkey=Gene;gene=nuoN;gene_biotype=protein_coding;locus_tag=LFV90_05030 DYDR01000006.1 Protein Homology CDS 114755 116137 . - 0 ID=cds-HJD61495.1;Parent=gene-LFV90_05030;Dbxref=NCBI_GP:HJD61495.1;Name=HJD61495.1;gbkey=CDS;gene=nuoN;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477449.1;locus_tag=LFV90_05030;product=NADH-quinone oxidoreductase subunit NuoN;protein_id=HJD61495.1;transl_table=11 DYDR01000006.1 tpg gene 116299 117174 . + . ID=gene-LFV90_05035;Name=LFV90_05035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_05035 DYDR01000006.1 Protein Homology CDS 116299 117174 . + 0 ID=cds-HJD61496.1;Parent=gene-LFV90_05035;Dbxref=NCBI_GP:HJD61496.1;Name=HJD61496.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008579848.1;locus_tag=LFV90_05035;product=DUF1189 domain-containing protein;protein_id=HJD61496.1;transl_table=11 DYDR01000006.1 tpg gene 117118 118065 . - . ID=gene-LFV90_05040;Name=miaA;gbkey=Gene;gene=miaA;gene_biotype=protein_coding;locus_tag=LFV90_05040 DYDR01000006.1 Protein Homology CDS 117118 118065 . - 0 ID=cds-HJD61497.1;Parent=gene-LFV90_05040;Dbxref=NCBI_GP:HJD61497.1;Name=HJD61497.1;gbkey=CDS;gene=miaA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012151982.1;locus_tag=LFV90_05040;product=tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA;protein_id=HJD61497.1;transl_table=11 DYDR01000006.1 tpg gene 118066 119442 . - . ID=gene-LFV90_05045;Name=LFV90_05045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_05045 DYDR01000006.1 Protein Homology CDS 118066 119442 . - 0 ID=cds-HJD61498.1;Parent=gene-LFV90_05045;Dbxref=NCBI_GP:HJD61498.1;Name=HJD61498.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012151981.1;locus_tag=LFV90_05045;product=phosphomannomutase/phosphoglucomutase;protein_id=HJD61498.1;transl_table=11 DYDR01000006.1 tpg gene 119598 120320 . - . ID=gene-LFV90_05050;Name=lptB;gbkey=Gene;gene=lptB;gene_biotype=protein_coding;locus_tag=LFV90_05050 DYDR01000006.1 Protein Homology CDS 119598 120320 . - 0 ID=cds-HJD61499.1;Parent=gene-LFV90_05050;Dbxref=NCBI_GP:HJD61499.1;Name=HJD61499.1;gbkey=CDS;gene=lptB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477445.1;locus_tag=LFV90_05050;product=LPS export ABC transporter ATP-binding protein;protein_id=HJD61499.1;transl_table=11 DYDR01000006.1 tpg gene 120321 120776 . - . ID=gene-LFV90_05055;Name=LFV90_05055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_05055 DYDR01000006.1 Protein Homology CDS 120321 120776 . - 0 ID=cds-HJD61500.1;Parent=gene-LFV90_05055;Dbxref=NCBI_GP:HJD61500.1;Name=HJD61500.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477444.1;locus_tag=LFV90_05055;product=LptA/OstA family protein;protein_id=HJD61500.1;transl_table=11 DYDR01000006.1 tpg gene 120742 121335 . - . ID=gene-LFV90_05060;Name=lptC;gbkey=Gene;gene=lptC;gene_biotype=protein_coding;locus_tag=LFV90_05060 DYDR01000006.1 Protein Homology CDS 120742 121335 . - 0 ID=cds-HJD61501.1;Parent=gene-LFV90_05060;Dbxref=NCBI_GP:HJD61501.1;Name=HJD61501.1;gbkey=CDS;gene=lptC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010886310.1;locus_tag=LFV90_05060;product=LPS export ABC transporter periplasmic protein LptC;protein_id=HJD61501.1;transl_table=11 DYDR01000006.1 tpg gene 121339 122298 . - . ID=gene-LFV90_05065;Name=LFV90_05065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_05065 DYDR01000006.1 Protein Homology CDS 121339 122298 . - 0 ID=cds-HJD61502.1;Parent=gene-LFV90_05065;Dbxref=NCBI_GP:HJD61502.1;Name=HJD61502.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004597752.1;locus_tag=LFV90_05065;product=KpsF/GutQ family sugar-phosphate isomerase;protein_id=HJD61502.1;transl_table=11 DYDR01000006.1 tpg gene 122562 124796 . - . ID=gene-LFV90_05070;Name=pnp;gbkey=Gene;gene=pnp;gene_biotype=protein_coding;locus_tag=LFV90_05070 DYDR01000006.1 Protein Homology CDS 122562 124796 . - 0 ID=cds-HJD61503.1;Parent=gene-LFV90_05070;Dbxref=NCBI_GP:HJD61503.1;Name=HJD61503.1;gbkey=CDS;gene=pnp;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010886309.1;locus_tag=LFV90_05070;product=polyribonucleotide nucleotidyltransferase;protein_id=HJD61503.1;transl_table=11 DYDR01000006.1 tpg gene 124990 125265 . - . ID=gene-LFV90_05075;Name=rpsO;gbkey=Gene;gene=rpsO;gene_biotype=protein_coding;locus_tag=LFV90_05075 DYDR01000006.1 Protein Homology CDS 124990 125265 . - 0 ID=cds-HJD61504.1;Parent=gene-LFV90_05075;Dbxref=NCBI_GP:HJD61504.1;Name=HJD61504.1;gbkey=CDS;gene=rpsO;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012736361.1;locus_tag=LFV90_05075;product=30S ribosomal protein S15;protein_id=HJD61504.1;transl_table=11 DYDR01000006.1 tpg gene 125287 126168 . - . ID=gene-LFV90_05080;Name=truB;gbkey=Gene;gene=truB;gene_biotype=protein_coding;locus_tag=LFV90_05080 DYDR01000006.1 Protein Homology CDS 125287 126168 . - 0 ID=cds-HJD61505.1;Parent=gene-LFV90_05080;Dbxref=NCBI_GP:HJD61505.1;Name=HJD61505.1;gbkey=CDS;gene=truB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477439.1;locus_tag=LFV90_05080;product=tRNA pseudouridine(55) synthase TruB;protein_id=HJD61505.1;transl_table=11 DYDR01000006.1 tpg gene 126388 127950 . + . ID=gene-LFV90_05085;Name=tlc4;gbkey=Gene;gene=tlc4;gene_biotype=protein_coding;locus_tag=LFV90_05085 DYDR01000006.1 Protein Homology CDS 126388 127950 . + 0 ID=cds-HJD61506.1;Parent=gene-LFV90_05085;Dbxref=NCBI_GP:HJD61506.1;Name=HJD61506.1;gbkey=CDS;gene=tlc4;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477438.1;locus_tag=LFV90_05085;product=NTP/NDP exchange transporter Tlc4;protein_id=HJD61506.1;transl_table=11 DYDR01000006.1 tpg gene 128028 131423 . + . ID=gene-LFV90_05090;Name=LFV90_05090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_05090 DYDR01000006.1 Protein Homology CDS 128028 131423 . + 0 ID=cds-HJD61507.1;Parent=gene-LFV90_05090;Dbxref=NCBI_GP:HJD61507.1;Name=HJD61507.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477437.1;locus_tag=LFV90_05090;product=Sca4 family spreading effector;protein_id=HJD61507.1;transl_table=11 DYDR01000006.1 tpg gene 131666 132163 . - . ID=gene-LFV90_05095;Name=rimM;gbkey=Gene;gene=rimM;gene_biotype=protein_coding;locus_tag=LFV90_05095 DYDR01000006.1 Protein Homology CDS 131666 132163 . - 0 ID=cds-HJD61508.1;Parent=gene-LFV90_05095;Dbxref=NCBI_GP:HJD61508.1;Name=HJD61508.1;Note=Essential for efficient processing of 16S rRNA;gbkey=CDS;gene=rimM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477436.1;locus_tag=LFV90_05095;product=ribosome maturation factor RimM;protein_id=HJD61508.1;transl_table=11 DYDR01000006.1 tpg gene 132380 135016 . + . ID=gene-LFV90_05100;Name=LFV90_05100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_05100 DYDR01000006.1 Protein Homology CDS 132380 135016 . + 0 ID=cds-HJD61509.1;Parent=gene-LFV90_05100;Dbxref=NCBI_GP:HJD61509.1;Name=HJD61509.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014364034.1;locus_tag=LFV90_05100;product=exodeoxyribonuclease 7 small subunit;protein_id=HJD61509.1;transl_table=11 DYDR01000006.1 tpg gene 135029 135271 . + . ID=gene-LFV90_05105;Name=LFV90_05105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_05105 DYDR01000006.1 Protein Homology CDS 135029 135271 . + 0 ID=cds-HJD61510.1;Parent=gene-LFV90_05105;Dbxref=NCBI_GP:HJD61510.1;Name=HJD61510.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011270889.1;locus_tag=LFV90_05105;product=exodeoxyribonuclease VII small subunit;protein_id=HJD61510.1;transl_table=11 DYDR01000006.1 tpg gene 135473 135613 . + . ID=gene-LFV90_05110;Name=LFV90_05110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_05110 DYDR01000006.1 GeneMarkS-2+ CDS 135473 135613 . + 0 ID=cds-HJD61511.1;Parent=gene-LFV90_05110;Dbxref=NCBI_GP:HJD61511.1;Name=HJD61511.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_05110;product=hypothetical protein;protein_id=HJD61511.1;transl_table=11 DYDR01000006.1 tpg gene 136021 136434 . + . ID=gene-LFV90_05115;Name=LFV90_05115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_05115 DYDR01000006.1 Protein Homology CDS 136021 136434 . + 0 ID=cds-HJD61512.1;Parent=gene-LFV90_05115;Dbxref=NCBI_GP:HJD61512.1;Name=HJD61512.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025389.2;locus_tag=LFV90_05115;product=DUF4239 domain-containing protein;protein_id=HJD61512.1;transl_table=11 DYDR01000006.1 tpg pseudogene 136409 136548 . - . ID=gene-LFV90_05120;Name=LFV90_05120;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LFV90_05120;pseudo=true DYDR01000006.1 Protein Homology CDS 136409 136548 . - 0 ID=cds-LFV90_05120;Parent=gene-LFV90_05120;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010423685.1;locus_tag=LFV90_05120;product=palindromic element RPE5 domain-containing protein;pseudo=true;transl_table=11 DYDR01000006.1 tpg gene 136844 137395 . + . ID=gene-LFV90_05125;Name=LFV90_05125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_05125 DYDR01000006.1 Protein Homology CDS 136844 137395 . + 0 ID=cds-HJD61513.1;Parent=gene-LFV90_05125;Dbxref=NCBI_GP:HJD61513.1;Name=HJD61513.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012738.2;locus_tag=LFV90_05125;product=ABC transporter permease subunit;protein_id=HJD61513.1;transl_table=11 DYDR01000006.1 tpg gene 137370 137852 . + . ID=gene-LFV90_05130;Name=LFV90_05130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_05130 DYDR01000006.1 GeneMarkS-2+ CDS 137370 137852 . + 0 ID=cds-HJD61514.1;Parent=gene-LFV90_05130;Dbxref=NCBI_GP:HJD61514.1;Name=HJD61514.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_05130;product=hypothetical protein;protein_id=HJD61514.1;transl_table=11 DYDR01000006.1 tpg gene 137819 138124 . + . ID=gene-LFV90_05135;Name=LFV90_05135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_05135 DYDR01000006.1 Protein Homology CDS 137819 138124 . + 0 ID=cds-HJD61515.1;Parent=gene-LFV90_05135;Dbxref=NCBI_GP:HJD61515.1;Name=HJD61515.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012738.2;locus_tag=LFV90_05135;product=ABC transporter permease subunit;protein_id=HJD61515.1;transl_table=11 DYDR01000006.1 tpg pseudogene 138489 139071 . + . ID=gene-LFV90_05140;Name=LFV90_05140;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LFV90_05140;pseudo=true DYDR01000006.1 Protein Homology CDS 138489 139071 . + 0 ID=cds-LFV90_05140;Parent=gene-LFV90_05140;Note=frameshifted;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012235.2;locus_tag=LFV90_05140;product=ATP-binding cassette domain-containing protein;pseudo=true;transl_table=11 DYDR01000006.1 tpg gene 139041 139337 . + . ID=gene-LFV90_05145;Name=LFV90_05145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_05145 DYDR01000006.1 GeneMarkS-2+ CDS 139041 139337 . + 0 ID=cds-HJD61516.1;Parent=gene-LFV90_05145;Dbxref=NCBI_GP:HJD61516.1;Name=HJD61516.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_05145;product=hypothetical protein;protein_id=HJD61516.1;transl_table=11 DYDR01000006.1 tpg gene 139324 139725 . + . ID=gene-LFV90_05150;Name=LFV90_05150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_05150 DYDR01000006.1 Protein Homology CDS 139324 139725 . + 0 ID=cds-HJD61517.1;Parent=gene-LFV90_05150;Dbxref=NCBI_GP:HJD61517.1;Name=HJD61517.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021350.2;locus_tag=LFV90_05150;product=AAA-associated domain-containing protein;protein_id=HJD61517.1;transl_table=11 DYDR01000006.1 tpg gene 139768 140295 . - . ID=gene-LFV90_05155;Name=LFV90_05155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_05155 DYDR01000006.1 Protein Homology CDS 139768 140295 . - 0 ID=cds-HJD61518.1;Parent=gene-LFV90_05155;Dbxref=NCBI_GP:HJD61518.1;Name=HJD61518.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014691.2;locus_tag=LFV90_05155;product=Fic family protein;protein_id=HJD61518.1;transl_table=11 DYDR01000006.1 tpg gene 140308 140697 . - . ID=gene-LFV90_05160;Name=LFV90_05160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_05160 DYDR01000006.1 GeneMarkS-2+ CDS 140308 140697 . - 0 ID=cds-HJD61519.1;Parent=gene-LFV90_05160;Dbxref=NCBI_GP:HJD61519.1;Name=HJD61519.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_05160;product=hypothetical protein;protein_id=HJD61519.1;transl_table=11 DYDR01000006.1 tpg pseudogene 140882 141279 . + . ID=gene-LFV90_05165;Name=LFV90_05165;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LFV90_05165;pseudo=true DYDR01000006.1 Protein Homology CDS 140882 141279 . + 0 ID=cds-LFV90_05165;Parent=gene-LFV90_05165;Note=frameshifted;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025149.2;locus_tag=LFV90_05165;product=DUF4172 domain-containing protein;pseudo=true;transl_table=11 DYDR01000006.1 tpg gene 141315 141569 . + . ID=gene-LFV90_05170;Name=LFV90_05170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_05170 DYDR01000006.1 Protein Homology CDS 141315 141569 . + 0 ID=cds-HJD61520.1;Parent=gene-LFV90_05170;Dbxref=NCBI_GP:HJD61520.1;Name=HJD61520.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014691.2;locus_tag=LFV90_05170;product=Fic family protein;protein_id=HJD61520.1;transl_table=11 DYDR01000006.1 tpg gene 141542 141973 . + . ID=gene-LFV90_05175;Name=LFV90_05175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_05175 DYDR01000006.1 GeneMarkS-2+ CDS 141542 141973 . + 0 ID=cds-HJD61521.1;Parent=gene-LFV90_05175;Dbxref=NCBI_GP:HJD61521.1;Name=HJD61521.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_05175;product=hypothetical protein;protein_id=HJD61521.1;transl_table=11 DYDR01000006.1 tpg gene 142178 142453 . + . ID=gene-LFV90_05180;Name=LFV90_05180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_05180 DYDR01000006.1 Protein Homology CDS 142178 142453 . + 0 ID=cds-HJD61522.1;Parent=gene-LFV90_05180;Dbxref=NCBI_GP:HJD61522.1;Name=HJD61522.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025157.2;locus_tag=LFV90_05180;product=hypothetical protein;protein_id=HJD61522.1;transl_table=11 DYDR01000006.1 tpg gene 142481 143146 . + . ID=gene-LFV90_05185;Name=LFV90_05185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_05185 DYDR01000006.1 Protein Homology CDS 142481 143146 . + 0 ID=cds-HJD61523.1;Parent=gene-LFV90_05185;Dbxref=NCBI_GP:HJD61523.1;Name=HJD61523.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014691.2;locus_tag=LFV90_05185;product=Fic family protein;protein_id=HJD61523.1;transl_table=11 DYDR01000006.1 tpg gene 143290 144669 . - . ID=gene-LFV90_05190;Name=LFV90_05190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_05190 DYDR01000006.1 Protein Homology CDS 143290 144669 . - 0 ID=cds-HJD61524.1;Parent=gene-LFV90_05190;Dbxref=NCBI_GP:HJD61524.1;Name=HJD61524.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011271232.1;locus_tag=LFV90_05190;product=sodium:solute symporter family protein;protein_id=HJD61524.1;transl_table=11 DYDR01000006.1 tpg gene 145233 145844 . - . ID=gene-LFV90_05195;Name=LFV90_05195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_05195 DYDR01000006.1 Protein Homology CDS 145233 145844 . - 0 ID=cds-HJD61525.1;Parent=gene-LFV90_05195;Dbxref=NCBI_GP:HJD61525.1;Name=HJD61525.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014392207.1;locus_tag=LFV90_05195;product=ribonuclease D;protein_id=HJD61525.1;transl_table=11 DYDR01000006.1 tpg gene 145884 146210 . - . ID=gene-LFV90_05200;Name=LFV90_05200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_05200 DYDR01000006.1 Protein Homology CDS 145884 146210 . - 0 ID=cds-HJD61526.1;Parent=gene-LFV90_05200;Dbxref=NCBI_GP:HJD61526.1;Name=HJD61526.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477415.1;locus_tag=LFV90_05200;product=septum formation initiator family protein;protein_id=HJD61526.1;transl_table=11 DYDR01000006.1 tpg gene 146207 146902 . - . ID=gene-LFV90_05205;Name=LFV90_05205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_05205 DYDR01000006.1 Protein Homology CDS 146207 146902 . - 0 ID=cds-HJD61527.1;Parent=gene-LFV90_05205;Dbxref=NCBI_GP:HJD61527.1;Name=HJD61527.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017443045.1;locus_tag=LFV90_05205;product=phosphatidate cytidylyltransferase;protein_id=HJD61527.1;transl_table=11 DYDR01000006.1 tpg gene 146862 147542 . - . ID=gene-LFV90_05210;Name=uppS;gbkey=Gene;gene=uppS;gene_biotype=protein_coding;locus_tag=LFV90_05210 DYDR01000006.1 Protein Homology CDS 146862 147542 . - 0 ID=cds-HJD61528.1;Parent=gene-LFV90_05210;Dbxref=NCBI_GP:HJD61528.1;Name=HJD61528.1;gbkey=CDS;gene=uppS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004597627.1;locus_tag=LFV90_05210;product=di-trans%2Cpoly-cis-decaprenylcistransferase;protein_id=HJD61528.1;transl_table=11 DYDR01000006.1 tpg gene 147572 147787 . + . ID=gene-LFV90_05215;Name=LFV90_05215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_05215 DYDR01000006.1 GeneMarkS-2+ CDS 147572 147787 . + 0 ID=cds-HJD61529.1;Parent=gene-LFV90_05215;Dbxref=NCBI_GP:HJD61529.1;Name=HJD61529.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_05215;product=hypothetical protein;protein_id=HJD61529.1;transl_table=11 DYDR01000006.1 tpg gene 147771 149090 . - . ID=gene-LFV90_05220;Name=LFV90_05220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_05220 DYDR01000006.1 Protein Homology CDS 147771 149090 . - 0 ID=cds-HJD61530.1;Parent=gene-LFV90_05220;Dbxref=NCBI_GP:HJD61530.1;Name=HJD61530.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012151962.1;locus_tag=LFV90_05220;product=ATP-binding protein;protein_id=HJD61530.1;transl_table=11 DYDR01000006.1 tpg gene 149074 149754 . - . ID=gene-LFV90_05225;Name=LFV90_05225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_05225 DYDR01000006.1 Protein Homology CDS 149074 149754 . - 0 ID=cds-HJD61531.1;Parent=gene-LFV90_05225;Dbxref=NCBI_GP:HJD61531.1;Name=HJD61531.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014409137.1;locus_tag=LFV90_05225;product=response regulator transcription factor;protein_id=HJD61531.1;transl_table=11 DYDR01000006.1 tpg gene 149955 150824 . + . ID=gene-LFV90_05230;Name=LFV90_05230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_05230 DYDR01000006.1 Protein Homology CDS 149955 150824 . + 0 ID=cds-HJD61532.1;Parent=gene-LFV90_05230;Dbxref=NCBI_GP:HJD61532.1;Name=HJD61532.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012151960.1;locus_tag=LFV90_05230;product=branched-chain amino acid transaminase;protein_id=HJD61532.1;transl_table=11 DYDR01000006.1 tpg gene 150983 151867 . + . ID=gene-LFV90_05235;Name=dapA;gbkey=Gene;gene=dapA;gene_biotype=protein_coding;locus_tag=LFV90_05235 DYDR01000006.1 Protein Homology CDS 150983 151867 . + 0 ID=cds-HJD61533.1;Parent=gene-LFV90_05235;Dbxref=NCBI_GP:HJD61533.1;Name=HJD61533.1;gbkey=CDS;gene=dapA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004597637.1;locus_tag=LFV90_05235;product=4-hydroxy-tetrahydrodipicolinate synthase;protein_id=HJD61533.1;transl_table=11 DYDR01000006.1 tpg gene 151864 152319 . + . ID=gene-LFV90_05240;Name=smpB;gbkey=Gene;gene=smpB;gene_biotype=protein_coding;locus_tag=LFV90_05240 DYDR01000006.1 Protein Homology CDS 151864 152319 . + 0 ID=cds-HJD61534.1;Parent=gene-LFV90_05240;Dbxref=NCBI_GP:HJD61534.1;Name=HJD61534.1;gbkey=CDS;gene=smpB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012148772.1;locus_tag=LFV90_05240;product=SsrA-binding protein SmpB;protein_id=HJD61534.1;transl_table=11 DYDR01000006.1 tpg gene 152330 152470 . - . ID=gene-LFV90_05245;Name=LFV90_05245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_05245 DYDR01000006.1 Protein Homology CDS 152330 152470 . - 0 ID=cds-HJD61535.1;Parent=gene-LFV90_05245;Dbxref=NCBI_GP:HJD61535.1;Name=HJD61535.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR03777.1;locus_tag=LFV90_05245;product=palindromic element RPE4 domain-containing protein;protein_id=HJD61535.1;transl_table=11 DYDR01000006.1 tpg pseudogene 152418 152585 . + . ID=gene-LFV90_05250;Name=LFV90_05250;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LFV90_05250;pseudo=true DYDR01000006.1 Protein Homology CDS 152418 152585 . + 0 ID=cds-LFV90_05250;Parent=gene-LFV90_05250;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR03777.1;locus_tag=LFV90_05250;product=hypothetical protein;pseudo=true;transl_table=11 DYDR01000006.1 tpg gene 152518 153306 . + . ID=gene-LFV90_05255;Name=LFV90_05255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_05255 DYDR01000006.1 Protein Homology CDS 152518 153306 . + 0 ID=cds-HJD61536.1;Parent=gene-LFV90_05255;Dbxref=NCBI_GP:HJD61536.1;Name=HJD61536.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016770142.1;locus_tag=LFV90_05255;product=DsbA family protein;protein_id=HJD61536.1;transl_table=11 DYDR01000006.1 tpg gene 153582 154340 . + . ID=gene-LFV90_05260;Name=LFV90_05260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_05260 DYDR01000006.1 Protein Homology CDS 153582 154340 . + 0 ID=cds-HJD61537.1;Parent=gene-LFV90_05260;Dbxref=NCBI_GP:HJD61537.1;Name=HJD61537.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024206.2;locus_tag=LFV90_05260;product=ankyrin repeat domain-containing protein;protein_id=HJD61537.1;transl_table=11 DYDR01000006.1 tpg gene 154748 156097 . + . ID=gene-LFV90_05265;Name=rho;gbkey=Gene;gene=rho;gene_biotype=protein_coding;locus_tag=LFV90_05265 DYDR01000006.1 Protein Homology CDS 154748 156097 . + 0 ID=cds-HJD61538.1;Parent=gene-LFV90_05265;Dbxref=NCBI_GP:HJD61538.1;Name=HJD61538.1;gbkey=CDS;gene=rho;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477405.1;locus_tag=LFV90_05265;product=transcription termination factor Rho;protein_id=HJD61538.1;transl_table=11 DYDR01000006.1 tpg gene 156307 157230 . + . ID=gene-LFV90_05270;Name=sppA;gbkey=Gene;gene=sppA;gene_biotype=protein_coding;locus_tag=LFV90_05270 DYDR01000006.1 Protein Homology CDS 156307 157230 . + 0 ID=cds-HJD61539.1;Parent=gene-LFV90_05270;Dbxref=NCBI_GP:HJD61539.1;Name=HJD61539.1;gbkey=CDS;gene=sppA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477404.1;locus_tag=LFV90_05270;product=signal peptide peptidase SppA;protein_id=HJD61539.1;transl_table=11 DYDR01000006.1 tpg gene 157220 157462 . + . ID=gene-LFV90_05275;Name=LFV90_05275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_05275 DYDR01000006.1 Protein Homology CDS 157220 157462 . + 0 ID=cds-HJD61540.1;Parent=gene-LFV90_05275;Dbxref=NCBI_GP:HJD61540.1;Name=HJD61540.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012150884.1;locus_tag=LFV90_05275;product=HU family DNA-binding protein;protein_id=HJD61540.1;transl_table=11 DYDR01000006.1 tpg gene 157532 158008 . + . ID=gene-LFV90_05280;Name=LFV90_05280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_05280 DYDR01000006.1 GeneMarkS-2+ CDS 157532 158008 . + 0 ID=cds-HJD61541.1;Parent=gene-LFV90_05280;Dbxref=NCBI_GP:HJD61541.1;Name=HJD61541.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_05280;product=hypothetical protein;protein_id=HJD61541.1;transl_table=11 DYDR01000006.1 tpg gene 158364 160187 . + . ID=gene-LFV90_05285;Name=LFV90_05285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_05285 DYDR01000006.1 Protein Homology CDS 158364 160187 . + 0 ID=cds-HJD61542.1;Parent=gene-LFV90_05285;Dbxref=NCBI_GP:HJD61542.1;Name=HJD61542.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017442983.1;locus_tag=LFV90_05285;product=ribonucleoside-diphosphate reductase subunit alpha;protein_id=HJD61542.1;transl_table=11 DYDR01000006.1 tpg gene 160373 161347 . + . ID=gene-LFV90_05290;Name=LFV90_05290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_05290 DYDR01000006.1 Protein Homology CDS 160373 161347 . + 0 ID=cds-HJD61543.1;Parent=gene-LFV90_05290;Dbxref=NCBI_GP:HJD61543.1;Name=HJD61543.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004599080.1;locus_tag=LFV90_05290;product=ribonucleotide-diphosphate reductase subunit beta;protein_id=HJD61543.1;transl_table=11 DYDR01000006.1 tpg gene 161528 162559 . + . ID=gene-LFV90_05295;Name=fni;gbkey=Gene;gene=fni;gene_biotype=protein_coding;locus_tag=LFV90_05295 DYDR01000006.1 Protein Homology CDS 161528 162559 . + 0 ID=cds-HJD61544.1;Parent=gene-LFV90_05295;Dbxref=NCBI_GP:HJD61544.1;Name=HJD61544.1;gbkey=CDS;gene=fni;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011190900.1;locus_tag=LFV90_05295;product=type 2 isopentenyl-diphosphate Delta-isomerase;protein_id=HJD61544.1;transl_table=11 DYDR01000006.1 tpg gene 162832 163803 . - . ID=gene-LFV90_05300;Name=LFV90_05300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_05300 DYDR01000006.1 Protein Homology CDS 162832 163803 . - 0 ID=cds-HJD61545.1;Parent=gene-LFV90_05300;Dbxref=NCBI_GP:HJD61545.1;Name=HJD61545.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010886302.1;locus_tag=LFV90_05300;product=hypothetical protein;protein_id=HJD61545.1;transl_table=11 DYDR01000006.1 tpg gene 163796 164470 . - . ID=gene-LFV90_05305;Name=LFV90_05305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_05305 DYDR01000006.1 Protein Homology CDS 163796 164470 . - 0 ID=cds-HJD61546.1;Parent=gene-LFV90_05305;Dbxref=NCBI_GP:HJD61546.1;Name=HJD61546.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014273547.1;locus_tag=LFV90_05305;product=hypothetical protein;protein_id=HJD61546.1;transl_table=11 DYDR01000006.1 tpg gene 164454 165188 . - . ID=gene-LFV90_05310;Name=LFV90_05310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_05310 DYDR01000006.1 Protein Homology CDS 164454 165188 . - 0 ID=cds-HJD61547.1;Parent=gene-LFV90_05310;Dbxref=NCBI_GP:HJD61547.1;Name=HJD61547.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012150901.1;locus_tag=LFV90_05310;product=uroporphyrinogen-III synthase;protein_id=HJD61547.1;transl_table=11 DYDR01000006.1 tpg pseudogene 165223 165804 . - . ID=gene-LFV90_05315;Name=LFV90_05315;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LFV90_05315;pseudo=true DYDR01000006.1 Protein Homology CDS 165223 165804 . - 0 ID=cds-LFV90_05315;Parent=gene-LFV90_05315;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014409294.1;locus_tag=LFV90_05315;product=LysE/ArgO family amino acid transporter;pseudo=true;transl_table=11 DYDR01000006.1 tpg gene 166434 167666 . - . ID=gene-LFV90_05320;Name=LFV90_05320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_05320 DYDR01000006.1 Protein Homology CDS 166434 167666 . - 0 ID=cds-HJD61548.1;Parent=gene-LFV90_05320;Dbxref=NCBI_GP:HJD61548.1;Name=HJD61548.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477391.1;locus_tag=LFV90_05320;product=AmpG family muropeptide MFS transporter;protein_id=HJD61548.1;transl_table=11 DYDR01000006.1 tpg gene 167800 169392 . + . ID=gene-LFV90_05325;Name=LFV90_05325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_05325 DYDR01000006.1 Protein Homology CDS 167800 169392 . + 0 ID=cds-HJD61549.1;Parent=gene-LFV90_05325;Dbxref=NCBI_GP:HJD61549.1;Name=HJD61549.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012151947.1;locus_tag=LFV90_05325;product=glycosyltransferase family 8 protein;protein_id=HJD61549.1;transl_table=11 DYDR01000006.1 tpg gene 169483 170997 . + . ID=gene-LFV90_05330;Name=tlc3;gbkey=Gene;gene=tlc3;gene_biotype=protein_coding;locus_tag=LFV90_05330 DYDR01000006.1 Protein Homology CDS 169483 170997 . + 0 ID=cds-HJD61550.1;Parent=gene-LFV90_05330;Dbxref=NCBI_GP:HJD61550.1;Name=HJD61550.1;gbkey=CDS;gene=tlc3;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004599498.1;locus_tag=LFV90_05330;product=nucleotide exchange transporter Tlc3;protein_id=HJD61550.1;transl_table=11 DYDR01000006.1 tpg gene 171016 171072 . - . ID=gene-LFV90_05335;Name=LFV90_05335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_05335 DYDR01000006.1 Protein Homology CDS 171016 171072 . - 0 ID=cds-HJD61551.1;Parent=gene-LFV90_05335;Dbxref=NCBI_GP:HJD61551.1;Name=HJD61551.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR03777.1;locus_tag=LFV90_05335;product=hypothetical protein;protein_id=HJD61551.1;transl_table=11 DYDR01000006.1 tpg gene 171190 171540 . + . ID=gene-LFV90_05340;Name=LFV90_05340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_05340 DYDR01000006.1 Protein Homology CDS 171190 171540 . + 0 ID=cds-HJD61552.1;Parent=gene-LFV90_05340;Dbxref=NCBI_GP:HJD61552.1;Name=HJD61552.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012151946.1;locus_tag=LFV90_05340;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=HJD61552.1;transl_table=11 DYDR01000006.1 tpg gene 171537 171827 . + . ID=gene-LFV90_05345;Name=LFV90_05345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_05345 DYDR01000006.1 Protein Homology CDS 171537 171827 . + 0 ID=cds-HJD61553.1;Parent=gene-LFV90_05345;Dbxref=NCBI_GP:HJD61553.1;Name=HJD61553.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012151945.1;locus_tag=LFV90_05345;product=helix-turn-helix domain-containing protein;protein_id=HJD61553.1;transl_table=11 DYDR01000006.1 tpg gene 171838 173508 . + . ID=gene-LFV90_05350;Name=LFV90_05350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_05350 DYDR01000006.1 Protein Homology CDS 171838 173508 . + 0 ID=cds-HJD61554.1;Parent=gene-LFV90_05350;Dbxref=NCBI_GP:HJD61554.1;Name=HJD61554.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477386.1;locus_tag=LFV90_05350;product=hypothetical protein;protein_id=HJD61554.1;transl_table=11 DYDR01000006.1 tpg gene 173508 174491 . + . ID=gene-LFV90_05355;Name=LFV90_05355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_05355 DYDR01000006.1 Protein Homology CDS 173508 174491 . + 0 ID=cds-HJD61555.1;Parent=gene-LFV90_05355;Dbxref=NCBI_GP:HJD61555.1;Name=HJD61555.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004998315.1;locus_tag=LFV90_05355;product=polyprenyl synthetase family protein;protein_id=HJD61555.1;transl_table=11 DYDR01000006.1 tpg gene 174651 175586 . + . ID=gene-LFV90_05360;Name=LFV90_05360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_05360 DYDR01000006.1 Protein Homology CDS 174651 175586 . + 0 ID=cds-HJD61556.1;Parent=gene-LFV90_05360;Dbxref=NCBI_GP:HJD61556.1;Name=HJD61556.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010423399.1;locus_tag=LFV90_05360;product=paraslipin;protein_id=HJD61556.1;transl_table=11 DYDR01000006.1 tpg gene 175695 176297 . + . ID=gene-LFV90_05365;Name=LFV90_05365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_05365 DYDR01000006.1 Protein Homology CDS 175695 176297 . + 0 ID=cds-HJD61557.1;Parent=gene-LFV90_05365;Dbxref=NCBI_GP:HJD61557.1;Name=HJD61557.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014410575.1;locus_tag=LFV90_05365;product=peroxiredoxin;protein_id=HJD61557.1;transl_table=11 DYDR01000006.1 tpg pseudogene 176508 177532 . + . ID=gene-LFV90_05370;Name=dprA;gbkey=Gene;gene=dprA;gene_biotype=pseudogene;locus_tag=LFV90_05370;pseudo=true DYDR01000006.1 Protein Homology CDS 176508 177532 . + 0 ID=cds-LFV90_05370;Parent=gene-LFV90_05370;Note=frameshifted%3B internal stop;gbkey=CDS;gene=dprA;inference=COORDINATES: protein motif:HMM:NF014533.2;locus_tag=LFV90_05370;product=DNA-processing protein DprA;pseudo=true;transl_table=11 DYDR01000006.1 tpg gene 177554 179956 . + . ID=gene-LFV90_05375;Name=topA;gbkey=Gene;gene=topA;gene_biotype=protein_coding;locus_tag=LFV90_05375 DYDR01000006.1 Protein Homology CDS 177554 179956 . + 0 ID=cds-HJD61558.1;Parent=gene-LFV90_05375;Dbxref=NCBI_GP:HJD61558.1;Name=HJD61558.1;gbkey=CDS;gene=topA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477380.1;locus_tag=LFV90_05375;product=type I DNA topoisomerase;protein_id=HJD61558.1;transl_table=11 DYDR01000006.1 tpg gene 179963 181324 . + . ID=gene-LFV90_05380;Name=gltX;gbkey=Gene;gene=gltX;gene_biotype=protein_coding;locus_tag=LFV90_05380 DYDR01000006.1 Protein Homology CDS 179963 181324 . + 0 ID=cds-HJD61559.1;Parent=gene-LFV90_05380;Dbxref=NCBI_GP:HJD61559.1;Name=HJD61559.1;gbkey=CDS;gene=gltX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017443148.1;locus_tag=LFV90_05380;product=glutamate--tRNA ligase;protein_id=HJD61559.1;transl_table=11 DYDR01000006.1 tpg gene 181475 182329 . + . ID=gene-LFV90_05385;Name=LFV90_05385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_05385 DYDR01000006.1 Protein Homology CDS 181475 182329 . + 0 ID=cds-HJD61560.1;Parent=gene-LFV90_05385;Dbxref=NCBI_GP:HJD61560.1;Name=HJD61560.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012149429.1;locus_tag=LFV90_05385;product=SDR family oxidoreductase;protein_id=HJD61560.1;transl_table=11 DYDR01000006.1 tpg gene 182537 183562 . + . ID=gene-LFV90_05390;Name=LFV90_05390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_05390 DYDR01000006.1 Protein Homology CDS 182537 183562 . + 0 ID=cds-HJD61561.1;Parent=gene-LFV90_05390;Dbxref=NCBI_GP:HJD61561.1;Name=HJD61561.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011270871.1;locus_tag=LFV90_05390;product=polysaccharide biosynthesis protein;protein_id=HJD61561.1;transl_table=11 DYDR01000006.1 tpg gene 183555 184685 . + . ID=gene-LFV90_05395;Name=wecB;gbkey=Gene;gene=wecB;gene_biotype=protein_coding;locus_tag=LFV90_05395 DYDR01000006.1 Protein Homology CDS 183555 184685 . + 0 ID=cds-HJD61562.1;Parent=gene-LFV90_05395;Dbxref=NCBI_GP:HJD61562.1;Name=HJD61562.1;gbkey=CDS;gene=wecB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004597460.1;locus_tag=LFV90_05395;product=UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing);protein_id=HJD61562.1;transl_table=11 DYDR01000006.1 tpg gene 184866 185657 . + . ID=gene-LFV90_05400;Name=LFV90_05400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_05400 DYDR01000006.1 Protein Homology CDS 184866 185657 . + 0 ID=cds-HJD61563.1;Parent=gene-LFV90_05400;Dbxref=NCBI_GP:HJD61563.1;Name=HJD61563.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025024.2;locus_tag=LFV90_05400;product=2OG-Fe(II) oxygenase;protein_id=HJD61563.1;transl_table=11 DYDR01000006.1 tpg gene 185676 186890 . + . ID=gene-LFV90_05405;Name=LFV90_05405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_05405 DYDR01000006.1 Protein Homology CDS 185676 186890 . + 0 ID=cds-HJD61564.1;Parent=gene-LFV90_05405;Dbxref=NCBI_GP:HJD61564.1;Name=HJD61564.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011190790.1;locus_tag=LFV90_05405;product=glycosyltransferase family 4 protein;protein_id=HJD61564.1;transl_table=11 DYDR01000006.1 tpg gene 186887 188086 . + . ID=gene-LFV90_05410;Name=LFV90_05410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_05410 DYDR01000006.1 Protein Homology CDS 186887 188086 . + 0 ID=cds-HJD61565.1;Parent=gene-LFV90_05410;Dbxref=NCBI_GP:HJD61565.1;Name=HJD61565.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012148883.1;locus_tag=LFV90_05410;product=glycosyltransferase;protein_id=HJD61565.1;transl_table=11 DYDR01000006.1 tpg gene 188093 189871 . + . ID=gene-LFV90_05415;Name=LFV90_05415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_05415 DYDR01000006.1 Protein Homology CDS 188093 189871 . + 0 ID=cds-HJD61566.1;Parent=gene-LFV90_05415;Dbxref=NCBI_GP:HJD61566.1;Name=HJD61566.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008580058.1;locus_tag=LFV90_05415;product=glycosyltransferase;protein_id=HJD61566.1;transl_table=11 DYDR01000006.1 tpg gene 189873 190871 . - . ID=gene-LFV90_05420;Name=LFV90_05420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_05420 DYDR01000006.1 Protein Homology CDS 189873 190871 . - 0 ID=cds-HJD61567.1;Parent=gene-LFV90_05420;Dbxref=NCBI_GP:HJD61567.1;Name=HJD61567.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014363048.1;locus_tag=LFV90_05420;product=efflux RND transporter periplasmic adaptor subunit;protein_id=HJD61567.1;transl_table=11 DYDR01000006.1 tpg gene 190877 191641 . - . ID=gene-LFV90_05425;Name=LFV90_05425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_05425 DYDR01000006.1 Protein Homology CDS 190877 191641 . - 0 ID=cds-HJD61568.1;Parent=gene-LFV90_05425;Dbxref=NCBI_GP:HJD61568.1;Name=HJD61568.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014364041.1;locus_tag=LFV90_05425;product=DUF2608 domain-containing protein;protein_id=HJD61568.1;transl_table=11 DYDR01000006.1 tpg gene 191773 192540 . - . ID=gene-LFV90_05430;Name=LFV90_05430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_05430 DYDR01000006.1 Protein Homology CDS 191773 192540 . - 0 ID=cds-HJD61569.1;Parent=gene-LFV90_05430;Dbxref=NCBI_GP:HJD61569.1;Name=HJD61569.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014410155.1;locus_tag=LFV90_05430;product=alpha/beta hydrolase;protein_id=HJD61569.1;transl_table=11 DYDR01000006.1 tpg gene 192573 193760 . + . ID=gene-LFV90_05435;Name=LFV90_05435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_05435 DYDR01000006.1 Protein Homology CDS 192573 193760 . + 0 ID=cds-HJD61570.1;Parent=gene-LFV90_05435;Dbxref=NCBI_GP:HJD61570.1;Name=HJD61570.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477370.1;locus_tag=LFV90_05435;product=glycosyltransferase family 4 protein;protein_id=HJD61570.1;transl_table=11 DYDR01000006.1 tpg gene 193930 194370 . + . ID=gene-LFV90_05440;Name=yajC;gbkey=Gene;gene=yajC;gene_biotype=protein_coding;locus_tag=LFV90_05440 DYDR01000006.1 Protein Homology CDS 193930 194370 . + 0 ID=cds-HJD61571.1;Parent=gene-LFV90_05440;Dbxref=NCBI_GP:HJD61571.1;Name=HJD61571.1;gbkey=CDS;gene=yajC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014392334.1;locus_tag=LFV90_05440;product=preprotein translocase subunit YajC;protein_id=HJD61571.1;transl_table=11 DYDR01000006.1 tpg gene 194354 195898 . + . ID=gene-LFV90_05445;Name=secD;gbkey=Gene;gene=secD;gene_biotype=protein_coding;locus_tag=LFV90_05445 DYDR01000006.1 Protein Homology CDS 194354 195898 . + 0 ID=cds-HJD61572.1;Parent=gene-LFV90_05445;Dbxref=NCBI_GP:HJD61572.1;Name=HJD61572.1;gbkey=CDS;gene=secD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477368.1;locus_tag=LFV90_05445;product=protein translocase subunit SecD;protein_id=HJD61572.1;transl_table=11 DYDR01000006.1 tpg gene 195917 196531 . + . ID=gene-LFV90_05450;Name=LFV90_05450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_05450 DYDR01000006.1 Protein Homology CDS 195917 196531 . + 0 ID=cds-HJD61573.1;Parent=gene-LFV90_05450;Dbxref=NCBI_GP:HJD61573.1;Name=HJD61573.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012151932.1;locus_tag=LFV90_05450;product=SCO family protein;protein_id=HJD61573.1;transl_table=11 DYDR01000006.1 tpg gene 196634 197047 . + . ID=gene-LFV90_05455;Name=ccmE;gbkey=Gene;gene=ccmE;gene_biotype=protein_coding;locus_tag=LFV90_05455 DYDR01000006.1 Protein Homology CDS 196634 197047 . + 0 ID=cds-HJD61574.1;Parent=gene-LFV90_05455;Dbxref=NCBI_GP:HJD61574.1;Name=HJD61574.1;gbkey=CDS;gene=ccmE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477366.1;locus_tag=LFV90_05455;product=cytochrome c maturation protein CcmE;protein_id=HJD61574.1;transl_table=11 DYDR01000006.1 tpg gene 197226 197750 . + . ID=gene-LFV90_05460;Name=ppa;gbkey=Gene;gene=ppa;gene_biotype=protein_coding;locus_tag=LFV90_05460 DYDR01000006.1 Protein Homology CDS 197226 197750 . + 0 ID=cds-HJD61575.1;Parent=gene-LFV90_05460;Dbxref=NCBI_GP:HJD61575.1;Name=HJD61575.1;gbkey=CDS;gene=ppa;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019230634.1;locus_tag=LFV90_05460;product=inorganic diphosphatase;protein_id=HJD61575.1;transl_table=11 DYDR01000006.1 tpg gene 198048 199565 . + . ID=gene-LFV90_05465;Name=murJ;gbkey=Gene;gene=murJ;gene_biotype=protein_coding;locus_tag=LFV90_05465 DYDR01000006.1 Protein Homology CDS 198048 199565 . + 0 ID=cds-HJD61576.1;Parent=gene-LFV90_05465;Dbxref=NCBI_GP:HJD61576.1;Name=HJD61576.1;gbkey=CDS;gene=murJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477364.1;locus_tag=LFV90_05465;product=murein biosynthesis integral membrane protein MurJ;protein_id=HJD61576.1;transl_table=11 DYDR01000006.1 tpg gene 199552 200301 . + . ID=gene-LFV90_05470;Name=LFV90_05470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_05470 DYDR01000006.1 Protein Homology CDS 199552 200301 . + 0 ID=cds-HJD61577.1;Parent=gene-LFV90_05470;Dbxref=NCBI_GP:HJD61577.1;Name=HJD61577.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012152979.1;locus_tag=LFV90_05470;product=conjugal transfer protein TraX;protein_id=HJD61577.1;transl_table=11 DYDR01000006.1 tpg gene 200380 200985 . + . ID=gene-LFV90_05475;Name=LFV90_05475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_05475 DYDR01000006.1 Protein Homology CDS 200380 200985 . + 0 ID=cds-HJD61578.1;Parent=gene-LFV90_05475;Dbxref=NCBI_GP:HJD61578.1;Name=HJD61578.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014120977.1;locus_tag=LFV90_05475;product=hypothetical protein;protein_id=HJD61578.1;transl_table=11 DYDR01000006.1 tpg pseudogene 201425 201904 . + . ID=gene-LFV90_05480;Name=LFV90_05480;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LFV90_05480;pseudo=true DYDR01000006.1 Protein Homology CDS 201425 201904 . + 0 ID=cds-LFV90_05480;Parent=gene-LFV90_05480;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016945812.1;locus_tag=LFV90_05480;product=methylated-DNA--[protein]-cysteine S-methyltransferase;pseudo=true;transl_table=11 DYDR01000006.1 tpg pseudogene 201920 202431 . + . ID=gene-LFV90_05485;Name=LFV90_05485;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LFV90_05485;pseudo=true DYDR01000006.1 Protein Homology CDS 201920 202431 . + 0 ID=cds-LFV90_05485;Parent=gene-LFV90_05485;Note=frameshifted;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020296.2;locus_tag=LFV90_05485;product=DNA alkylation repair protein;pseudo=true;transl_table=11 DYDR01000006.1 tpg gene 202485 203012 . + . ID=gene-LFV90_05490;Name=LFV90_05490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_05490 DYDR01000006.1 Protein Homology CDS 202485 203012 . + 0 ID=cds-HJD61579.1;Parent=gene-LFV90_05490;Dbxref=NCBI_GP:HJD61579.1;Name=HJD61579.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477359.1;locus_tag=LFV90_05490;product=copper chaperone PCu(A)C;protein_id=HJD61579.1;transl_table=11 DYDR01000006.1 tpg gene 203225 204085 . - . ID=gene-LFV90_05495;Name=LFV90_05495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_05495 DYDR01000006.1 Protein Homology CDS 203225 204085 . - 0 ID=cds-HJD61580.1;Parent=gene-LFV90_05495;Dbxref=NCBI_GP:HJD61580.1;Name=HJD61580.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477358.1;locus_tag=LFV90_05495;product=ribonuclease D;protein_id=HJD61580.1;transl_table=11 DYDR01000006.1 tpg gene 204098 204889 . - . ID=gene-LFV90_05500;Name=LFV90_05500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_05500 DYDR01000006.1 Protein Homology CDS 204098 204889 . - 0 ID=cds-HJD61581.1;Parent=gene-LFV90_05500;Dbxref=NCBI_GP:HJD61581.1;Name=HJD61581.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004998262.1;locus_tag=LFV90_05500;product=RMD1 family protein;protein_id=HJD61581.1;transl_table=11 DYDR01000006.1 tpg gene 205003 205812 . + . ID=gene-LFV90_05505;Name=LFV90_05505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_05505 DYDR01000006.1 Protein Homology CDS 205003 205812 . + 0 ID=cds-HJD61582.1;Parent=gene-LFV90_05505;Dbxref=NCBI_GP:HJD61582.1;Name=HJD61582.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477356.1;locus_tag=LFV90_05505;product=folate-binding protein;protein_id=HJD61582.1;transl_table=11 DYDR01000006.1 tpg gene 206001 206846 . + . ID=gene-LFV90_05510;Name=LFV90_05510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_05510 DYDR01000006.1 Protein Homology CDS 206001 206846 . + 0 ID=cds-HJD61583.1;Parent=gene-LFV90_05510;Dbxref=NCBI_GP:HJD61583.1;Name=HJD61583.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012150816.1;locus_tag=LFV90_05510;product=glycosyltransferase;protein_id=HJD61583.1;transl_table=11 DYDR01000006.1 tpg gene 207094 209055 . + . ID=gene-LFV90_05515;Name=pcrA;gbkey=Gene;gene=pcrA;gene_biotype=protein_coding;locus_tag=LFV90_05515 DYDR01000006.1 Protein Homology CDS 207094 209055 . + 0 ID=cds-HJD61584.1;Parent=gene-LFV90_05515;Dbxref=NCBI_GP:HJD61584.1;Name=HJD61584.1;gbkey=CDS;gene=pcrA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016770129.1;locus_tag=LFV90_05515;product=DNA helicase PcrA;protein_id=HJD61584.1;transl_table=11 DYDR01000006.1 tpg gene 209142 209801 . + . ID=gene-LFV90_05520;Name=LFV90_05520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_05520 DYDR01000006.1 GeneMarkS-2+ CDS 209142 209801 . + 0 ID=cds-HJD61585.1;Parent=gene-LFV90_05520;Dbxref=NCBI_GP:HJD61585.1;Name=HJD61585.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_05520;product=hypothetical protein;protein_id=HJD61585.1;transl_table=11 DYDR01000006.1 tpg gene 209900 210325 . + . ID=gene-LFV90_05525;Name=LFV90_05525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_05525 DYDR01000006.1 GeneMarkS-2+ CDS 209900 210325 . + 0 ID=cds-HJD61586.1;Parent=gene-LFV90_05525;Dbxref=NCBI_GP:HJD61586.1;Name=HJD61586.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_05525;product=hypothetical protein;protein_id=HJD61586.1;transl_table=11 DYDR01000006.1 tpg gene 210309 210494 . + . ID=gene-LFV90_05530;Name=LFV90_05530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_05530 DYDR01000006.1 GeneMarkS-2+ CDS 210309 210494 . + 0 ID=cds-HJD61587.1;Parent=gene-LFV90_05530;Dbxref=NCBI_GP:HJD61587.1;Name=HJD61587.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_05530;product=hypothetical protein;protein_id=HJD61587.1;transl_table=11 DYDR01000006.1 tpg gene 211042 211230 . + . ID=gene-LFV90_05535;Name=LFV90_05535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_05535 DYDR01000006.1 GeneMarkS-2+ CDS 211042 211230 . + 0 ID=cds-HJD61588.1;Parent=gene-LFV90_05535;Dbxref=NCBI_GP:HJD61588.1;Name=HJD61588.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_05535;product=hypothetical protein;protein_id=HJD61588.1;transl_table=11 DYDR01000006.1 tpg gene 211246 211776 . + . ID=gene-LFV90_05540;Name=LFV90_05540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_05540 DYDR01000006.1 GeneMarkS-2+ CDS 211246 211776 . + 0 ID=cds-HJD61589.1;Parent=gene-LFV90_05540;Dbxref=NCBI_GP:HJD61589.1;Name=HJD61589.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_05540;product=hypothetical protein;protein_id=HJD61589.1;transl_table=11 DYDR01000006.1 tpg gene 212264 212479 . - . ID=gene-LFV90_05545;Name=LFV90_05545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_05545 DYDR01000006.1 GeneMarkS-2+ CDS 212264 212479 . - 0 ID=cds-HJD61590.1;Parent=gene-LFV90_05545;Dbxref=NCBI_GP:HJD61590.1;Name=HJD61590.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_05545;product=hypothetical protein;protein_id=HJD61590.1;transl_table=11 DYDR01000006.1 tpg gene 213047 213382 . - . ID=gene-LFV90_05550;Name=LFV90_05550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_05550 DYDR01000006.1 GeneMarkS-2+ CDS 213047 213382 . - 0 ID=cds-HJD61591.1;Parent=gene-LFV90_05550;Dbxref=NCBI_GP:HJD61591.1;Name=HJD61591.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_05550;product=hypothetical protein;protein_id=HJD61591.1;transl_table=11 DYDR01000006.1 tpg gene 213667 213864 . - . ID=gene-LFV90_05555;Name=LFV90_05555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_05555 DYDR01000006.1 GeneMarkS-2+ CDS 213667 213864 . - 0 ID=cds-HJD61592.1;Parent=gene-LFV90_05555;Dbxref=NCBI_GP:HJD61592.1;Name=HJD61592.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_05555;product=hypothetical protein;protein_id=HJD61592.1;transl_table=11 DYDR01000006.1 tpg pseudogene 214041 214590 . - . ID=gene-LFV90_05560;Name=def;gbkey=Gene;gene=def;gene_biotype=pseudogene;locus_tag=LFV90_05560;pseudo=true DYDR01000006.1 Protein Homology CDS 214041 214590 . - 0 ID=cds-LFV90_05560;Parent=gene-LFV90_05560;Note=frameshifted%3B internal stop;gbkey=CDS;gene=def;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016926285.1;locus_tag=LFV90_05560;product=peptide deformylase;pseudo=true;transl_table=11 DYDR01000006.1 tpg gene 214602 215333 . - . ID=gene-LFV90_05565;Name=pgeF;gbkey=Gene;gene=pgeF;gene_biotype=protein_coding;locus_tag=LFV90_05565 DYDR01000006.1 Protein Homology CDS 214602 215333 . - 0 ID=cds-HJD61593.1;Parent=gene-LFV90_05565;Dbxref=NCBI_GP:HJD61593.1;Name=HJD61593.1;gbkey=CDS;gene=pgeF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004597737.1;locus_tag=LFV90_05565;product=peptidoglycan editing factor PgeF;protein_id=HJD61593.1;transl_table=11 DYDR01000006.1 tpg gene 215332 216153 . + . ID=gene-LFV90_05570;Name=LFV90_05570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_05570 DYDR01000006.1 Protein Homology CDS 215332 216153 . + 0 ID=cds-HJD61594.1;Parent=gene-LFV90_05570;Dbxref=NCBI_GP:HJD61594.1;Name=HJD61594.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016916815.1;locus_tag=LFV90_05570;product=glutamine synthetase;protein_id=HJD61594.1;transl_table=11 DYDR01000006.1 tpg gene 216228 216740 . - . ID=gene-LFV90_05575;Name=LFV90_05575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_05575 DYDR01000006.1 Protein Homology CDS 216228 216740 . - 0 ID=cds-HJD61595.1;Parent=gene-LFV90_05575;Dbxref=NCBI_GP:HJD61595.1;Name=HJD61595.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012151920.1;locus_tag=LFV90_05575;product=gamma carbonic anhydrase family protein;protein_id=HJD61595.1;transl_table=11 DYDR01000006.1 tpg gene 216740 217318 . - . ID=gene-LFV90_05580;Name=raiA;gbkey=Gene;gene=raiA;gene_biotype=protein_coding;locus_tag=LFV90_05580 DYDR01000006.1 Protein Homology CDS 216740 217318 . - 0 ID=cds-HJD61596.1;Parent=gene-LFV90_05580;Dbxref=NCBI_GP:HJD61596.1;Name=HJD61596.1;gbkey=CDS;gene=raiA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017442976.1;locus_tag=LFV90_05580;product=ribosome-associated translation inhibitor RaiA;protein_id=HJD61596.1;transl_table=11 DYDR01000006.1 tpg gene 218140 218216 . + . ID=gene-LFV90_05585;Name=LFV90_05585;gbkey=Gene;gene_biotype=tRNA;locus_tag=LFV90_05585 DYDR01000006.1 tRNAscan-SE tRNA 218140 218216 . + . ID=rna-LFV90_05585;Parent=gene-LFV90_05585;anticodon=(pos:218174..218176);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=LFV90_05585;product=tRNA-Asp DYDR01000006.1 tRNAscan-SE exon 218140 218216 . + . ID=exon-LFV90_05585-1;Parent=rna-LFV90_05585;anticodon=(pos:218174..218176);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=LFV90_05585;product=tRNA-Asp DYDR01000006.1 tpg gene 218990 219151 . - . ID=gene-LFV90_05590;Name=LFV90_05590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_05590 DYDR01000006.1 GeneMarkS-2+ CDS 218990 219151 . - 0 ID=cds-HJD61597.1;Parent=gene-LFV90_05590;Dbxref=NCBI_GP:HJD61597.1;Name=HJD61597.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_05590;product=ankyrin repeat domain-containing protein;protein_id=HJD61597.1;transl_table=11 DYDR01000006.1 tpg gene 219129 219362 . - . ID=gene-LFV90_05595;Name=LFV90_05595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_05595 DYDR01000006.1 GeneMarkS-2+ CDS 219129 219362 . - 0 ID=cds-HJD61598.1;Parent=gene-LFV90_05595;Dbxref=NCBI_GP:HJD61598.1;Name=HJD61598.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_05595;product=hypothetical protein;protein_id=HJD61598.1;transl_table=11 DYDR01000006.1 tpg gene 219788 220054 . + . ID=gene-LFV90_05600;Name=LFV90_05600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_05600 DYDR01000006.1 Protein Homology CDS 219788 220054 . + 0 ID=cds-HJD61599.1;Parent=gene-LFV90_05600;Dbxref=NCBI_GP:HJD61599.1;Name=HJD61599.1;Note=subunit F of antiporter complex involved in resistance to high concentrations of Na+%2C K+%2C Li+ and/or alkali;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014409358.1;locus_tag=LFV90_05600;product=cation:proton antiporter;protein_id=HJD61599.1;transl_table=11 DYDR01000006.1 tpg gene 220026 221168 . + . ID=gene-LFV90_05605;Name=ubiH;gbkey=Gene;gene=ubiH;gene_biotype=protein_coding;locus_tag=LFV90_05605 DYDR01000006.1 Protein Homology CDS 220026 221168 . + 0 ID=cds-HJD61600.1;Parent=gene-LFV90_05605;Dbxref=NCBI_GP:HJD61600.1;Name=HJD61600.1;gbkey=CDS;gene=ubiH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014362591.1;locus_tag=LFV90_05605;product=2-octaprenyl-6-methoxyphenyl hydroxylase;protein_id=HJD61600.1;transl_table=11 DYDR01000006.1 tpg gene 221225 221287 . - . ID=gene-LFV90_05610;Name=LFV90_05610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_05610 DYDR01000006.1 Protein Homology CDS 221225 221287 . - 0 ID=cds-HJD61601.1;Parent=gene-LFV90_05610;Dbxref=NCBI_GP:HJD61601.1;Name=HJD61601.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR03776.1;locus_tag=LFV90_05610;product=hypothetical protein;protein_id=HJD61601.1;transl_table=11 DYDR01000006.1 tpg gene 221572 221997 . + . ID=gene-LFV90_05615;Name=LFV90_05615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_05615 DYDR01000006.1 GeneMarkS-2+ CDS 221572 221997 . + 0 ID=cds-HJD61602.1;Parent=gene-LFV90_05615;Dbxref=NCBI_GP:HJD61602.1;Name=HJD61602.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_05615;product=hypothetical protein;protein_id=HJD61602.1;transl_table=11 DYDR01000006.1 tpg gene 222266 222433 . + . ID=gene-LFV90_05620;Name=LFV90_05620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_05620 DYDR01000006.1 GeneMarkS-2+ CDS 222266 222433 . + 0 ID=cds-HJD61603.1;Parent=gene-LFV90_05620;Dbxref=NCBI_GP:HJD61603.1;Name=HJD61603.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_05620;product=hypothetical protein;protein_id=HJD61603.1;transl_table=11 DYDR01000006.1 tpg gene 222520 222951 . + . ID=gene-LFV90_05625;Name=LFV90_05625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_05625 DYDR01000006.1 Protein Homology CDS 222520 222951 . + 0 ID=cds-HJD61604.1;Parent=gene-LFV90_05625;Dbxref=NCBI_GP:HJD61604.1;Name=HJD61604.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477296.1;locus_tag=LFV90_05625;product=hypothetical protein;protein_id=HJD61604.1;transl_table=11 DYDR01000006.1 tpg gene 222952 223032 . + . ID=gene-LFV90_05630;Name=LFV90_05630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_05630 DYDR01000006.1 Protein Homology CDS 222952 223032 . + 0 ID=cds-HJD61605.1;Parent=gene-LFV90_05630;Dbxref=NCBI_GP:HJD61605.1;Name=HJD61605.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR03775.1;locus_tag=LFV90_05630;product=palindromic element RPE3 domain-containing protein;protein_id=HJD61605.1;transl_table=11 DYDR01000006.1 tpg gene 223073 223684 . + . ID=gene-LFV90_05635;Name=LFV90_05635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_05635 DYDR01000006.1 Protein Homology CDS 223073 223684 . + 0 ID=cds-HJD61606.1;Parent=gene-LFV90_05635;Dbxref=NCBI_GP:HJD61606.1;Name=HJD61606.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF039185.1;locus_tag=LFV90_05635;product=double zinc ribbon domain-containing protein;protein_id=HJD61606.1;transl_table=11 DYDR01000006.1 tpg gene 223684 223788 . + . ID=gene-LFV90_05640;Name=LFV90_05640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_05640 DYDR01000006.1 Protein Homology CDS 223684 223788 . + 0 ID=cds-HJD61607.1;Parent=gene-LFV90_05640;Dbxref=NCBI_GP:HJD61607.1;Name=HJD61607.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012383.2;locus_tag=LFV90_05640;product=amidophosphoribosyltransferase;protein_id=HJD61607.1;transl_table=11 DYDR01000006.1 tpg pseudogene 224040 224460 . + . ID=gene-LFV90_05645;Name=LFV90_05645;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LFV90_05645;pseudo=true DYDR01000006.1 Protein Homology CDS 224040 224460 . + 0 ID=cds-LFV90_05645;Parent=gene-LFV90_05645;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014757.2;locus_tag=LFV90_05645;product=3-hydroxyacyl-CoA dehydrogenase family protein;pseudo=true;transl_table=11 DYDR01000006.1 tpg gene 224464 225228 . + . ID=gene-LFV90_05650;Name=LFV90_05650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_05650 DYDR01000006.1 Protein Homology CDS 224464 225228 . + 0 ID=cds-HJD61608.1;Parent=gene-LFV90_05650;Dbxref=NCBI_GP:HJD61608.1;Name=HJD61608.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012928.2;locus_tag=LFV90_05650;product=3-hydroxyacyl-CoA dehydrogenase family protein;protein_id=HJD61608.1;transl_table=11 DYDR01000006.1 tpg gene 225306 225608 . + . ID=gene-LFV90_05655;Name=LFV90_05655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_05655 DYDR01000006.1 GeneMarkS-2+ CDS 225306 225608 . + 0 ID=cds-HJD61609.1;Parent=gene-LFV90_05655;Dbxref=NCBI_GP:HJD61609.1;Name=HJD61609.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_05655;product=hypothetical protein;protein_id=HJD61609.1;transl_table=11 DYDR01000006.1 tpg gene 225571 226158 . + . ID=gene-LFV90_05660;Name=LFV90_05660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_05660 DYDR01000006.1 GeneMarkS-2+ CDS 225571 226158 . + 0 ID=cds-HJD61610.1;Parent=gene-LFV90_05660;Dbxref=NCBI_GP:HJD61610.1;Name=HJD61610.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_05660;product=hypothetical protein;protein_id=HJD61610.1;transl_table=11 DYDR01000006.1 tpg gene 226445 226669 . - . ID=gene-LFV90_05665;Name=LFV90_05665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_05665 DYDR01000006.1 GeneMarkS-2+ CDS 226445 226669 . - 0 ID=cds-HJD61611.1;Parent=gene-LFV90_05665;Dbxref=NCBI_GP:HJD61611.1;Name=HJD61611.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_05665;product=hypothetical protein;protein_id=HJD61611.1;transl_table=11 DYDR01000006.1 tpg gene 227441 228202 . - . ID=gene-LFV90_05670;Name=LFV90_05670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_05670 DYDR01000006.1 GeneMarkS-2+ CDS 227441 228202 . - 0 ID=cds-HJD61612.1;Parent=gene-LFV90_05670;Dbxref=NCBI_GP:HJD61612.1;Name=HJD61612.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_05670;product=GNAT family N-acetyltransferase;protein_id=HJD61612.1;transl_table=11 DYDR01000006.1 tpg gene 228340 228777 . - . ID=gene-LFV90_05675;Name=LFV90_05675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_05675 DYDR01000006.1 Protein Homology CDS 228340 228777 . - 0 ID=cds-HJD61613.1;Parent=gene-LFV90_05675;Dbxref=NCBI_GP:HJD61613.1;Name=HJD61613.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013382.2;locus_tag=LFV90_05675;product=class I SAM-dependent methyltransferase;protein_id=HJD61613.1;transl_table=11 DYDR01000006.1 tpg gene 228882 229055 . - . ID=gene-LFV90_05680;Name=LFV90_05680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_05680 DYDR01000006.1 GeneMarkS-2+ CDS 228882 229055 . - 0 ID=cds-HJD61614.1;Parent=gene-LFV90_05680;Dbxref=NCBI_GP:HJD61614.1;Name=HJD61614.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_05680;product=hypothetical protein;protein_id=HJD61614.1;transl_table=11 DYDR01000006.1 tpg gene 229205 229897 . - . ID=gene-LFV90_05685;Name=LFV90_05685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_05685 DYDR01000006.1 GeneMarkS-2+ CDS 229205 229897 . - 0 ID=cds-HJD61615.1;Parent=gene-LFV90_05685;Dbxref=NCBI_GP:HJD61615.1;Name=HJD61615.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_05685;product=hypothetical protein;protein_id=HJD61615.1;transl_table=11 DYDR01000006.1 tpg gene 230155 231399 . - . ID=gene-LFV90_05690;Name=hemA;gbkey=Gene;gene=hemA;gene_biotype=protein_coding;locus_tag=LFV90_05690 DYDR01000006.1 Protein Homology CDS 230155 231399 . - 0 ID=cds-HJD61616.1;Parent=gene-LFV90_05690;Dbxref=NCBI_GP:HJD61616.1;Name=HJD61616.1;gbkey=CDS;gene=hemA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011271634.1;locus_tag=LFV90_05690;product=5-aminolevulinate synthase;protein_id=HJD61616.1;transl_table=11 DYDR01000006.1 tpg gene 231596 233461 . - . ID=gene-LFV90_05695;Name=htpG;gbkey=Gene;gene=htpG;gene_biotype=protein_coding;locus_tag=LFV90_05695 DYDR01000006.1 Protein Homology CDS 231596 233461 . - 0 ID=cds-HJD61617.1;Parent=gene-LFV90_05695;Dbxref=NCBI_GP:HJD61617.1;Name=HJD61617.1;gbkey=CDS;gene=htpG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012151911.1;locus_tag=LFV90_05695;product=molecular chaperone HtpG;protein_id=HJD61617.1;transl_table=11 DYDR01000006.1 tpg gene 233609 233923 . - . ID=gene-LFV90_05700;Name=LFV90_05700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_05700 DYDR01000006.1 Protein Homology CDS 233609 233923 . - 0 ID=cds-HJD61618.1;Parent=gene-LFV90_05700;Dbxref=NCBI_GP:HJD61618.1;Name=HJD61618.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477302.1;locus_tag=LFV90_05700;product=DUF167 domain-containing protein;protein_id=HJD61618.1;transl_table=11 DYDR01000006.1 tpg gene 234273 234632 . + . ID=gene-LFV90_05705;Name=LFV90_05705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_05705 DYDR01000006.1 GeneMarkS-2+ CDS 234273 234632 . + 0 ID=cds-HJD61619.1;Parent=gene-LFV90_05705;Dbxref=NCBI_GP:HJD61619.1;Name=HJD61619.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_05705;product=hypothetical protein;protein_id=HJD61619.1;transl_table=11 DYDR01000006.1 tpg gene 234637 235320 . + . ID=gene-LFV90_05710;Name=LFV90_05710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_05710 DYDR01000006.1 GeneMarkS-2+ CDS 234637 235320 . + 0 ID=cds-HJD61620.1;Parent=gene-LFV90_05710;Dbxref=NCBI_GP:HJD61620.1;Name=HJD61620.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_05710;product=hypothetical protein;protein_id=HJD61620.1;transl_table=11 DYDR01000006.1 tpg gene 235877 237751 . + . ID=gene-LFV90_05715;Name=LFV90_05715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_05715 DYDR01000006.1 Protein Homology CDS 235877 237751 . + 0 ID=cds-HJD61621.1;Parent=gene-LFV90_05715;Dbxref=NCBI_GP:HJD61621.1;Name=HJD61621.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024816.2;locus_tag=LFV90_05715;product=tetratricopeptide repeat protein;protein_id=HJD61621.1;transl_table=11 DYDR01000006.1 tpg gene 237817 238611 . - . ID=gene-LFV90_05720;Name=LFV90_05720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_05720 DYDR01000006.1 GeneMarkS-2+ CDS 237817 238611 . - 0 ID=cds-HJD61622.1;Parent=gene-LFV90_05720;Dbxref=NCBI_GP:HJD61622.1;Name=HJD61622.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_05720;product=hypothetical protein;protein_id=HJD61622.1;transl_table=11 DYDR01000006.1 tpg gene 238692 239414 . - . ID=gene-LFV90_05725;Name=LFV90_05725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_05725 DYDR01000006.1 Protein Homology CDS 238692 239414 . - 0 ID=cds-HJD61623.1;Parent=gene-LFV90_05725;Dbxref=NCBI_GP:HJD61623.1;Name=HJD61623.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024574.2;locus_tag=LFV90_05725;product=tetratricopeptide repeat protein;protein_id=HJD61623.1;transl_table=11 DYDR01000006.1 tpg gene 239740 240027 . - . ID=gene-LFV90_05730;Name=LFV90_05730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_05730 DYDR01000006.1 Protein Homology CDS 239740 240027 . - 0 ID=cds-HJD61624.1;Parent=gene-LFV90_05730;Dbxref=NCBI_GP:HJD61624.1;Name=HJD61624.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014412967.1;locus_tag=LFV90_05730;product=hypothetical protein;protein_id=HJD61624.1;transl_table=11 DYDR01000006.1 tpg gene 240230 241846 . - . ID=gene-LFV90_05735;Name=LFV90_05735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_05735 DYDR01000006.1 Protein Homology CDS 240230 241846 . - 0 ID=cds-HJD61625.1;Parent=gene-LFV90_05735;Dbxref=NCBI_GP:HJD61625.1;Name=HJD61625.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024936.2;locus_tag=LFV90_05735;product=glycoside hydrolase TIM-barrel-like domain-containing protein;protein_id=HJD61625.1;transl_table=11 DYDR01000006.1 tpg gene 242043 242762 . - . ID=gene-LFV90_05740;Name=LFV90_05740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_05740 DYDR01000006.1 GeneMarkS-2+ CDS 242043 242762 . - 0 ID=cds-HJD61626.1;Parent=gene-LFV90_05740;Dbxref=NCBI_GP:HJD61626.1;Name=HJD61626.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_05740;product=hypothetical protein;protein_id=HJD61626.1;transl_table=11 DYDR01000006.1 tpg gene 242853 242969 . - . ID=gene-LFV90_05745;Name=LFV90_05745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_05745 DYDR01000006.1 Protein Homology CDS 242853 242969 . - 0 ID=cds-HJD61627.1;Parent=gene-LFV90_05745;Dbxref=NCBI_GP:HJD61627.1;Name=HJD61627.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010423469.1;locus_tag=LFV90_05745;product=host specificity protein;protein_id=HJD61627.1;transl_table=11 DYDR01000006.1 tpg gene 243260 244138 . + . ID=gene-LFV90_05750;Name=LFV90_05750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_05750 DYDR01000006.1 Protein Homology CDS 243260 244138 . + 0 ID=cds-HJD61628.1;Parent=gene-LFV90_05750;Dbxref=NCBI_GP:HJD61628.1;Name=HJD61628.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008580402.1;locus_tag=LFV90_05750;product=DUF2608 domain-containing protein;protein_id=HJD61628.1;transl_table=11 DYDR01000006.1 tpg gene 244101 244949 . + . ID=gene-LFV90_05755;Name=LFV90_05755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_05755 DYDR01000006.1 Protein Homology CDS 244101 244949 . + 0 ID=cds-HJD61629.1;Parent=gene-LFV90_05755;Dbxref=NCBI_GP:HJD61629.1;Name=HJD61629.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017443108.1;locus_tag=LFV90_05755;product=DUF2608 domain-containing protein;protein_id=HJD61629.1;transl_table=11 DYDR01000006.1 tpg gene 244951 245712 . + . ID=gene-LFV90_05760;Name=LFV90_05760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_05760 DYDR01000006.1 Protein Homology CDS 244951 245712 . + 0 ID=cds-HJD61630.1;Parent=gene-LFV90_05760;Dbxref=NCBI_GP:HJD61630.1;Name=HJD61630.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477308.1;locus_tag=LFV90_05760;product=3'(2')%2C5'-bisphosphate nucleotidase CysQ;protein_id=HJD61630.1;transl_table=11 DYDR01000006.1 tpg gene 245796 245951 . + . ID=gene-LFV90_05765;Name=LFV90_05765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_05765 DYDR01000006.1 Protein Homology CDS 245796 245951 . + 0 ID=cds-HJD61631.1;Parent=gene-LFV90_05765;Dbxref=NCBI_GP:HJD61631.1;Name=HJD61631.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR03777.1;locus_tag=LFV90_05765;product=hypothetical protein;protein_id=HJD61631.1;transl_table=11 DYDR01000006.1 tpg gene 246319 246567 . - . ID=gene-LFV90_05770;Name=LFV90_05770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_05770 DYDR01000006.1 GeneMarkS-2+ CDS 246319 246567 . - 0 ID=cds-HJD61632.1;Parent=gene-LFV90_05770;Dbxref=NCBI_GP:HJD61632.1;Name=HJD61632.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_05770;product=hypothetical protein;protein_id=HJD61632.1;transl_table=11 DYDR01000006.1 tpg gene 246518 246970 . - . ID=gene-LFV90_05775;Name=LFV90_05775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_05775 DYDR01000006.1 GeneMarkS-2+ CDS 246518 246970 . - 0 ID=cds-HJD61633.1;Parent=gene-LFV90_05775;Dbxref=NCBI_GP:HJD61633.1;Name=HJD61633.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_05775;product=hypothetical protein;protein_id=HJD61633.1;transl_table=11 DYDR01000006.1 tpg gene 246894 247094 . - . ID=gene-LFV90_05780;Name=LFV90_05780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_05780 DYDR01000006.1 GeneMarkS-2+ CDS 246894 247094 . - 0 ID=cds-HJD61634.1;Parent=gene-LFV90_05780;Dbxref=NCBI_GP:HJD61634.1;Name=HJD61634.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_05780;product=hypothetical protein;protein_id=HJD61634.1;transl_table=11 DYDR01000006.1 tpg gene 247273 247551 . + . ID=gene-LFV90_05785;Name=LFV90_05785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_05785 DYDR01000006.1 Protein Homology CDS 247273 247551 . + 0 ID=cds-HJD61635.1;Parent=gene-LFV90_05785;Dbxref=NCBI_GP:HJD61635.1;Name=HJD61635.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477310.1;locus_tag=LFV90_05785;product=hypothetical protein;protein_id=HJD61635.1;transl_table=11 DYDR01000006.1 tpg pseudogene 247621 248656 . + . ID=gene-LFV90_05790;Name=LFV90_05790;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LFV90_05790;pseudo=true DYDR01000006.1 Protein Homology CDS 247621 248656 . + 0 ID=cds-LFV90_05790;Parent=gene-LFV90_05790;Note=frameshifted;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF037547.2;locus_tag=LFV90_05790;product=DUF5410 domain-containing protein;pseudo=true;transl_table=11 DYDR01000006.1 tpg gene 248858 250228 . - . ID=gene-LFV90_05795;Name=mgtE;gbkey=Gene;gene=mgtE;gene_biotype=protein_coding;locus_tag=LFV90_05795 DYDR01000006.1 Protein Homology CDS 248858 250228 . - 0 ID=cds-HJD61636.1;Parent=gene-LFV90_05795;Dbxref=NCBI_GP:HJD61636.1;Name=HJD61636.1;gbkey=CDS;gene=mgtE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014412558.1;locus_tag=LFV90_05795;product=magnesium transporter;protein_id=HJD61636.1;transl_table=11 DYDR01000006.1 tpg gene 250578 250958 . + . ID=gene-LFV90_05800;Name=LFV90_05800;end_range=250958,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_05800;partial=true DYDR01000006.1 Protein Homology CDS 250578 250958 . + 0 ID=cds-HJD61637.1;Parent=gene-LFV90_05800;Dbxref=NCBI_GP:HJD61637.1;Name=HJD61637.1;end_range=250958,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011476761.1;locus_tag=LFV90_05800;partial=true;product=Rpn family recombination-promoting nuclease/putative transposase;protein_id=HJD61637.1;transl_table=11 ##sequence-region DYDR01000007.1 1 212864 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2866300 DYDR01000007.1 tpg region 1 212864 . + . ID=DYDR01000007.1:1..212864;Dbxref=taxon:2866300;collection-date=2001-12-01;country=Madagascar: Toliara;environmental-sample=true;gbkey=Src;isolate=Choog2;isolation-source=Insect;metagenome-source=insect metagenome;metagenomic=true;mol_type=genomic DNA;nat-host=Columbicola hoogstraali DYDR01000007.1 tpg pseudogene 369 1136 . + . ID=gene-LFV90_05805;Name=LFV90_05805;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LFV90_05805;pseudo=true DYDR01000007.1 Protein Homology CDS 369 1136 . + 0 ID=cds-LFV90_05805;Parent=gene-LFV90_05805;Note=internal stop;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024194.2;locus_tag=LFV90_05805;product=Rpn family recombination-promoting nuclease/putative transposase;pseudo=true;transl_table=11 DYDR01000007.1 tpg gene 1119 2480 . - . ID=gene-LFV90_05810;Name=LFV90_05810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_05810 DYDR01000007.1 Protein Homology CDS 1119 2480 . - 0 ID=cds-HJD61638.1;Parent=gene-LFV90_05810;Dbxref=NCBI_GP:HJD61638.1;Name=HJD61638.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477191.1;locus_tag=LFV90_05810;product=cytochrome ubiquinol oxidase subunit I;protein_id=HJD61638.1;transl_table=11 DYDR01000007.1 tpg gene 2524 2796 . - . ID=gene-LFV90_05815;Name=LFV90_05815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_05815 DYDR01000007.1 Protein Homology CDS 2524 2796 . - 0 ID=cds-HJD61639.1;Parent=gene-LFV90_05815;Dbxref=NCBI_GP:HJD61639.1;Name=HJD61639.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004596007.1;locus_tag=LFV90_05815;product=DUF2671 domain-containing protein;protein_id=HJD61639.1;transl_table=11 DYDR01000007.1 tpg gene 2948 4717 . + . ID=gene-LFV90_05820;Name=LFV90_05820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_05820 DYDR01000007.1 Protein Homology CDS 2948 4717 . + 0 ID=cds-HJD61640.1;Parent=gene-LFV90_05820;Dbxref=NCBI_GP:HJD61640.1;Name=HJD61640.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012151763.1;locus_tag=LFV90_05820;product=ABC transporter ATP-binding protein/permease;protein_id=HJD61640.1;transl_table=11 DYDR01000007.1 tpg gene 5058 6296 . - . ID=gene-LFV90_05825;Name=LFV90_05825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_05825 DYDR01000007.1 Protein Homology CDS 5058 6296 . - 0 ID=cds-HJD61641.1;Parent=gene-LFV90_05825;Dbxref=NCBI_GP:HJD61641.1;Name=HJD61641.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004596018.1;locus_tag=LFV90_05825;product=insulinase family protein;protein_id=HJD61641.1;transl_table=11 DYDR01000007.1 tpg gene 6323 7192 . - . ID=gene-LFV90_05830;Name=LFV90_05830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_05830 DYDR01000007.1 Protein Homology CDS 6323 7192 . - 0 ID=cds-HJD61642.1;Parent=gene-LFV90_05830;Dbxref=NCBI_GP:HJD61642.1;Name=HJD61642.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477195.1;locus_tag=LFV90_05830;product=glycosyltransferase family 2 protein;protein_id=HJD61642.1;transl_table=11 DYDR01000007.1 tpg gene 7249 7536 . - . ID=gene-LFV90_05835;Name=LFV90_05835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_05835 DYDR01000007.1 Protein Homology CDS 7249 7536 . - 0 ID=cds-HJD61643.1;Parent=gene-LFV90_05835;Dbxref=NCBI_GP:HJD61643.1;Name=HJD61643.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010423511.1;locus_tag=LFV90_05835;product=GIY-YIG nuclease family protein;protein_id=HJD61643.1;transl_table=11 DYDR01000007.1 tpg gene 7830 8729 . - . ID=gene-LFV90_05840;Name=rpoH;gbkey=Gene;gene=rpoH;gene_biotype=protein_coding;locus_tag=LFV90_05840 DYDR01000007.1 Protein Homology CDS 7830 8729 . - 0 ID=cds-HJD61644.1;Parent=gene-LFV90_05840;Dbxref=NCBI_GP:HJD61644.1;Name=HJD61644.1;gbkey=CDS;gene=rpoH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004996153.1;locus_tag=LFV90_05840;product=RNA polymerase sigma factor RpoH;protein_id=HJD61644.1;transl_table=11 DYDR01000007.1 tpg gene 8820 9362 . + . ID=gene-LFV90_05845;Name=LFV90_05845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_05845 DYDR01000007.1 Protein Homology CDS 8820 9362 . + 0 ID=cds-HJD61645.1;Parent=gene-LFV90_05845;Dbxref=NCBI_GP:HJD61645.1;Name=HJD61645.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477199.1;locus_tag=LFV90_05845;product=cytochrome c oxidase assembly protein;protein_id=HJD61645.1;transl_table=11 DYDR01000007.1 tpg gene 9442 9621 . + . ID=gene-LFV90_05850;Name=LFV90_05850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_05850 DYDR01000007.1 GeneMarkS-2+ CDS 9442 9621 . + 0 ID=cds-HJD61646.1;Parent=gene-LFV90_05850;Dbxref=NCBI_GP:HJD61646.1;Name=HJD61646.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_05850;product=AbrB/MazE/SpoVT family DNA-binding domain-containing protein;protein_id=HJD61646.1;transl_table=11 DYDR01000007.1 tpg gene 9823 10821 . - . ID=gene-LFV90_05855;Name=LFV90_05855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_05855 DYDR01000007.1 Protein Homology CDS 9823 10821 . - 0 ID=cds-HJD61647.1;Parent=gene-LFV90_05855;Dbxref=NCBI_GP:HJD61647.1;Name=HJD61647.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477202.1;locus_tag=LFV90_05855;product=hypothetical protein;protein_id=HJD61647.1;transl_table=11 DYDR01000007.1 tpg pseudogene 10985 12076 . + . ID=gene-LFV90_05860;Name=mnmA;gbkey=Gene;gene=mnmA;gene_biotype=pseudogene;locus_tag=LFV90_05860;pseudo=true DYDR01000007.1 Protein Homology CDS 10985 12076 . + 0 ID=cds-LFV90_05860;Parent=gene-LFV90_05860;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;gene=mnmA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477203.1;locus_tag=LFV90_05860;product=tRNA 2-thiouridine(34) synthase MnmA;pseudo=true;transl_table=11 DYDR01000007.1 tpg gene 12066 12152 . - . ID=gene-LFV90_05865;Name=LFV90_05865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_05865 DYDR01000007.1 Protein Homology CDS 12066 12152 . - 0 ID=cds-HJD61648.1;Parent=gene-LFV90_05865;Dbxref=NCBI_GP:HJD61648.1;Name=HJD61648.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR03777.1;locus_tag=LFV90_05865;product=palindromic element RPE4 domain-containing protein;protein_id=HJD61648.1;transl_table=11 DYDR01000007.1 tpg pseudogene 12121 12189 . + . ID=gene-LFV90_05870;Name=LFV90_05870;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LFV90_05870;pseudo=true DYDR01000007.1 Protein Homology CDS 12121 12189 . + 0 ID=cds-LFV90_05870;Parent=gene-LFV90_05870;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR03777.1;locus_tag=LFV90_05870;product=hypothetical protein;pseudo=true;transl_table=11 DYDR01000007.1 tpg gene 12229 13623 . + . ID=gene-LFV90_05875;Name=LFV90_05875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_05875 DYDR01000007.1 Protein Homology CDS 12229 13623 . + 0 ID=cds-HJD61649.1;Parent=gene-LFV90_05875;Dbxref=NCBI_GP:HJD61649.1;Name=HJD61649.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012151766.1;locus_tag=LFV90_05875;product=amino acid permease;protein_id=HJD61649.1;transl_table=11 DYDR01000007.1 tpg gene 13779 15026 . + . ID=gene-LFV90_05880;Name=hisS;gbkey=Gene;gene=hisS;gene_biotype=protein_coding;locus_tag=LFV90_05880 DYDR01000007.1 Protein Homology CDS 13779 15026 . + 0 ID=cds-HJD61650.1;Parent=gene-LFV90_05880;Dbxref=NCBI_GP:HJD61650.1;Name=HJD61650.1;gbkey=CDS;gene=hisS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477205.1;locus_tag=LFV90_05880;product=histidine--tRNA ligase;protein_id=HJD61650.1;transl_table=11 DYDR01000007.1 tpg gene 15216 15926 . + . ID=gene-LFV90_05885;Name=LFV90_05885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_05885 DYDR01000007.1 Protein Homology CDS 15216 15926 . + 0 ID=cds-HJD61651.1;Parent=gene-LFV90_05885;Dbxref=NCBI_GP:HJD61651.1;Name=HJD61651.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477206.1;locus_tag=LFV90_05885;product=phosphoribosylaminoimidazolesuccinocarboxamide synthase;protein_id=HJD61651.1;transl_table=11 DYDR01000007.1 tpg gene 15940 17847 . + . ID=gene-LFV90_05890;Name=thrS;gbkey=Gene;gene=thrS;gene_biotype=protein_coding;locus_tag=LFV90_05890 DYDR01000007.1 Protein Homology CDS 15940 17847 . + 0 ID=cds-HJD61652.1;Parent=gene-LFV90_05890;Dbxref=NCBI_GP:HJD61652.1;Name=HJD61652.1;gbkey=CDS;gene=thrS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010976955.1;locus_tag=LFV90_05890;product=threonine--tRNA ligase;protein_id=HJD61652.1;transl_table=11 DYDR01000007.1 tpg gene 17848 17946 . + . ID=gene-LFV90_05895;Name=LFV90_05895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_05895 DYDR01000007.1 Protein Homology CDS 17848 17946 . + 0 ID=cds-HJD61653.1;Parent=gene-LFV90_05895;Dbxref=NCBI_GP:HJD61653.1;Name=HJD61653.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR03777.1;locus_tag=LFV90_05895;product=palindromic element RPE4 domain-containing protein;protein_id=HJD61653.1;transl_table=11 DYDR01000007.1 tpg gene 17989 18651 . + . ID=gene-LFV90_05900;Name=LFV90_05900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_05900 DYDR01000007.1 Protein Homology CDS 17989 18651 . + 0 ID=cds-HJD61654.1;Parent=gene-LFV90_05900;Dbxref=NCBI_GP:HJD61654.1;Name=HJD61654.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477208.1;locus_tag=LFV90_05900;product=hypothetical protein;protein_id=HJD61654.1;transl_table=11 DYDR01000007.1 tpg gene 18726 19196 . + . ID=gene-LFV90_05905;Name=LFV90_05905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_05905 DYDR01000007.1 Protein Homology CDS 18726 19196 . + 0 ID=cds-HJD61655.1;Parent=gene-LFV90_05905;Dbxref=NCBI_GP:HJD61655.1;Name=HJD61655.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012312.2;locus_tag=LFV90_05905;product=MFS transporter;protein_id=HJD61655.1;transl_table=11 DYDR01000007.1 tpg gene 19178 19564 . + . ID=gene-LFV90_05910;Name=LFV90_05910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_05910 DYDR01000007.1 GeneMarkS-2+ CDS 19178 19564 . + 0 ID=cds-HJD61656.1;Parent=gene-LFV90_05910;Dbxref=NCBI_GP:HJD61656.1;Name=HJD61656.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_05910;product=hypothetical protein;protein_id=HJD61656.1;transl_table=11 DYDR01000007.1 tpg gene 19722 20039 . + . ID=gene-LFV90_05915;Name=LFV90_05915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_05915 DYDR01000007.1 GeneMarkS-2+ CDS 19722 20039 . + 0 ID=cds-HJD61657.1;Parent=gene-LFV90_05915;Dbxref=NCBI_GP:HJD61657.1;Name=HJD61657.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_05915;product=hypothetical protein;protein_id=HJD61657.1;transl_table=11 DYDR01000007.1 tpg gene 20060 20623 . - . ID=gene-LFV90_05920;Name=LFV90_05920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_05920 DYDR01000007.1 Protein Homology CDS 20060 20623 . - 0 ID=cds-HJD61658.1;Parent=gene-LFV90_05920;Dbxref=NCBI_GP:HJD61658.1;Name=HJD61658.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013703.2;locus_tag=LFV90_05920;product=hypothetical protein;protein_id=HJD61658.1;transl_table=11 DYDR01000007.1 tpg gene 20624 21349 . - . ID=gene-LFV90_05925;Name=LFV90_05925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_05925 DYDR01000007.1 Protein Homology CDS 20624 21349 . - 0 ID=cds-HJD61659.1;Parent=gene-LFV90_05925;Dbxref=NCBI_GP:HJD61659.1;Name=HJD61659.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013703.2;locus_tag=LFV90_05925;product=hypothetical protein;protein_id=HJD61659.1;transl_table=11 DYDR01000007.1 tpg gene 21355 21618 . - . ID=gene-LFV90_05930;Name=LFV90_05930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_05930 DYDR01000007.1 GeneMarkS-2+ CDS 21355 21618 . - 0 ID=cds-HJD61660.1;Parent=gene-LFV90_05930;Dbxref=NCBI_GP:HJD61660.1;Name=HJD61660.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_05930;product=hypothetical protein;protein_id=HJD61660.1;transl_table=11 DYDR01000007.1 tpg gene 21915 22052 . - . ID=gene-LFV90_05935;Name=LFV90_05935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_05935 DYDR01000007.1 GeneMarkS-2+ CDS 21915 22052 . - 0 ID=cds-HJD61661.1;Parent=gene-LFV90_05935;Dbxref=NCBI_GP:HJD61661.1;Name=HJD61661.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_05935;product=hypothetical protein;protein_id=HJD61661.1;transl_table=11 DYDR01000007.1 tpg gene 22342 22509 . - . ID=gene-LFV90_05940;Name=LFV90_05940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_05940 DYDR01000007.1 GeneMarkS-2+ CDS 22342 22509 . - 0 ID=cds-HJD61662.1;Parent=gene-LFV90_05940;Dbxref=NCBI_GP:HJD61662.1;Name=HJD61662.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_05940;product=hypothetical protein;protein_id=HJD61662.1;transl_table=11 DYDR01000007.1 tpg gene 22648 22977 . - . ID=gene-LFV90_05945;Name=LFV90_05945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_05945 DYDR01000007.1 GeneMarkS-2+ CDS 22648 22977 . - 0 ID=cds-HJD61663.1;Parent=gene-LFV90_05945;Dbxref=NCBI_GP:HJD61663.1;Name=HJD61663.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_05945;product=hypothetical protein;protein_id=HJD61663.1;transl_table=11 DYDR01000007.1 tpg gene 23632 24087 . + . ID=gene-LFV90_05950;Name=mraZ;gbkey=Gene;gene=mraZ;gene_biotype=protein_coding;locus_tag=LFV90_05950 DYDR01000007.1 Protein Homology CDS 23632 24087 . + 0 ID=cds-HJD61664.1;Parent=gene-LFV90_05950;Dbxref=NCBI_GP:HJD61664.1;Name=HJD61664.1;gbkey=CDS;gene=mraZ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477211.1;locus_tag=LFV90_05950;product=division/cell wall cluster transcriptional repressor MraZ;protein_id=HJD61664.1;transl_table=11 DYDR01000007.1 tpg gene 24084 25001 . + . ID=gene-LFV90_05955;Name=rsmH;gbkey=Gene;gene=rsmH;gene_biotype=protein_coding;locus_tag=LFV90_05955 DYDR01000007.1 Protein Homology CDS 24084 25001 . + 0 ID=cds-HJD61665.1;Parent=gene-LFV90_05955;Dbxref=NCBI_GP:HJD61665.1;Name=HJD61665.1;gbkey=CDS;gene=rsmH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012151769.1;locus_tag=LFV90_05955;product=16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH;protein_id=HJD61665.1;transl_table=11 DYDR01000007.1 tpg gene 25004 25399 . + . ID=gene-LFV90_05960;Name=LFV90_05960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_05960 DYDR01000007.1 Protein Homology CDS 25004 25399 . + 0 ID=cds-HJD61666.1;Parent=gene-LFV90_05960;Dbxref=NCBI_GP:HJD61666.1;Name=HJD61666.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477213.1;locus_tag=LFV90_05960;product=hypothetical protein;protein_id=HJD61666.1;transl_table=11 DYDR01000007.1 tpg gene 25532 27217 . + . ID=gene-LFV90_05965;Name=LFV90_05965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_05965 DYDR01000007.1 Protein Homology CDS 25532 27217 . + 0 ID=cds-HJD61667.1;Parent=gene-LFV90_05965;Dbxref=NCBI_GP:HJD61667.1;Name=HJD61667.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477214.1;locus_tag=LFV90_05965;product=penicillin-binding protein 2;protein_id=HJD61667.1;transl_table=11 DYDR01000007.1 tpg gene 27421 28833 . + . ID=gene-LFV90_05970;Name=LFV90_05970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_05970 DYDR01000007.1 GeneMarkS-2+ CDS 27421 28833 . + 0 ID=cds-HJD61668.1;Parent=gene-LFV90_05970;Dbxref=NCBI_GP:HJD61668.1;Name=HJD61668.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_05970;product=hypothetical protein;protein_id=HJD61668.1;transl_table=11 DYDR01000007.1 tpg gene 28830 30152 . + . ID=gene-LFV90_05975;Name=LFV90_05975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_05975 DYDR01000007.1 GeneMarkS-2+ CDS 28830 30152 . + 0 ID=cds-HJD61669.1;Parent=gene-LFV90_05975;Dbxref=NCBI_GP:HJD61669.1;Name=HJD61669.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_05975;product=hypothetical protein;protein_id=HJD61669.1;transl_table=11 DYDR01000007.1 tpg pseudogene 30364 30477 . + . ID=gene-LFV90_05980;Name=LFV90_05980;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LFV90_05980;pseudo=true DYDR01000007.1 Protein Homology CDS 30364 30477 . + 0 ID=cds-LFV90_05980;Parent=gene-LFV90_05980;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR03777.1;locus_tag=LFV90_05980;product=palindromic element RPE4 domain-containing protein;pseudo=true;transl_table=11 DYDR01000007.1 tpg pseudogene 30748 32057 . + . ID=gene-LFV90_05985;Name=LFV90_05985;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LFV90_05985;pseudo=true DYDR01000007.1 Protein Homology CDS 30748 32057 . + 0 ID=cds-LFV90_05985;Parent=gene-LFV90_05985;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477223.1;locus_tag=LFV90_05985;product=MFS transporter;pseudo=true;transl_table=11 DYDR01000007.1 tpg pseudogene 32020 32709 . - . ID=gene-LFV90_05990;Name=LFV90_05990;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LFV90_05990;pseudo=true DYDR01000007.1 Protein Homology CDS 32020 32709 . - 0 ID=cds-LFV90_05990;Parent=gene-LFV90_05990;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011271276.1;locus_tag=LFV90_05990;product=HD domain-containing protein;pseudo=true;transl_table=11 DYDR01000007.1 tpg gene 33225 34751 . + . ID=gene-LFV90_05995;Name=LFV90_05995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_05995 DYDR01000007.1 GeneMarkS-2+ CDS 33225 34751 . + 0 ID=cds-HJD61670.1;Parent=gene-LFV90_05995;Dbxref=NCBI_GP:HJD61670.1;Name=HJD61670.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_05995;product=tetratricopeptide repeat protein;protein_id=HJD61670.1;transl_table=11 DYDR01000007.1 tpg pseudogene 34860 34937 . + . ID=gene-LFV90_06000;Name=LFV90_06000;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LFV90_06000;pseudo=true DYDR01000007.1 Protein Homology CDS 34860 34937 . + 0 ID=cds-LFV90_06000;Parent=gene-LFV90_06000;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024579.2;locus_tag=LFV90_06000;product=hypothetical protein;pseudo=true;transl_table=11 DYDR01000007.1 tpg gene 34950 35318 . + . ID=gene-LFV90_06005;Name=LFV90_06005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_06005 DYDR01000007.1 GeneMarkS-2+ CDS 34950 35318 . + 0 ID=cds-HJD61671.1;Parent=gene-LFV90_06005;Dbxref=NCBI_GP:HJD61671.1;Name=HJD61671.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_06005;product=hypothetical protein;protein_id=HJD61671.1;transl_table=11 DYDR01000007.1 tpg gene 35371 35805 . - . ID=gene-LFV90_06010;Name=LFV90_06010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_06010 DYDR01000007.1 Protein Homology CDS 35371 35805 . - 0 ID=cds-HJD61672.1;Parent=gene-LFV90_06010;Dbxref=NCBI_GP:HJD61672.1;Name=HJD61672.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477225.1;locus_tag=LFV90_06010;product=ankyrin repeat domain-containing protein;protein_id=HJD61672.1;transl_table=11 DYDR01000007.1 tpg gene 36959 37393 . - . ID=gene-LFV90_06015;Name=LFV90_06015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_06015 DYDR01000007.1 Protein Homology CDS 36959 37393 . - 0 ID=cds-HJD61673.1;Parent=gene-LFV90_06015;Dbxref=NCBI_GP:HJD61673.1;Name=HJD61673.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477227.1;locus_tag=LFV90_06015;product=helix-turn-helix transcriptional regulator;protein_id=HJD61673.1;transl_table=11 DYDR01000007.1 tpg gene 37807 37968 . + . ID=gene-LFV90_06020;Name=LFV90_06020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_06020 DYDR01000007.1 GeneMarkS-2+ CDS 37807 37968 . + 0 ID=cds-HJD61674.1;Parent=gene-LFV90_06020;Dbxref=NCBI_GP:HJD61674.1;Name=HJD61674.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_06020;product=hypothetical protein;protein_id=HJD61674.1;transl_table=11 DYDR01000007.1 tpg gene 38057 38242 . + . ID=gene-LFV90_06025;Name=LFV90_06025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_06025 DYDR01000007.1 Protein Homology CDS 38057 38242 . + 0 ID=cds-HJD61675.1;Parent=gene-LFV90_06025;Dbxref=NCBI_GP:HJD61675.1;Name=HJD61675.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477228.1;locus_tag=LFV90_06025;product=twin transmembrane helix small protein;protein_id=HJD61675.1;transl_table=11 DYDR01000007.1 tpg gene 38267 38464 . - . ID=gene-LFV90_06030;Name=LFV90_06030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_06030 DYDR01000007.1 Protein Homology CDS 38267 38464 . - 0 ID=cds-HJD61676.1;Parent=gene-LFV90_06030;Dbxref=NCBI_GP:HJD61676.1;Name=HJD61676.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016284.2;locus_tag=LFV90_06030;product=Fe-S cluster assembly protein IscX;protein_id=HJD61676.1;transl_table=11 DYDR01000007.1 tpg gene 38835 39362 . + . ID=gene-LFV90_06035;Name=def;gbkey=Gene;gene=def;gene_biotype=protein_coding;locus_tag=LFV90_06035 DYDR01000007.1 Protein Homology CDS 38835 39362 . + 0 ID=cds-HJD61677.1;Parent=gene-LFV90_06035;Dbxref=NCBI_GP:HJD61677.1;Name=HJD61677.1;gbkey=CDS;gene=def;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012150494.1;locus_tag=LFV90_06035;product=peptide deformylase;protein_id=HJD61677.1;transl_table=11 DYDR01000007.1 tpg gene 39359 40273 . + . ID=gene-LFV90_06040;Name=fmt;gbkey=Gene;gene=fmt;gene_biotype=protein_coding;locus_tag=LFV90_06040 DYDR01000007.1 Protein Homology CDS 39359 40273 . + 0 ID=cds-HJD61678.1;Parent=gene-LFV90_06040;Dbxref=NCBI_GP:HJD61678.1;Name=HJD61678.1;gbkey=CDS;gene=fmt;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477231.1;locus_tag=LFV90_06040;product=methionyl-tRNA formyltransferase;protein_id=HJD61678.1;transl_table=11 DYDR01000007.1 tpg gene 40551 40856 . + . ID=gene-LFV90_06045;Name=LFV90_06045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_06045 DYDR01000007.1 GeneMarkS-2+ CDS 40551 40856 . + 0 ID=cds-HJD61679.1;Parent=gene-LFV90_06045;Dbxref=NCBI_GP:HJD61679.1;Name=HJD61679.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_06045;product=hypothetical protein;protein_id=HJD61679.1;transl_table=11 DYDR01000007.1 tpg pseudogene 40814 41337 . + . ID=gene-LFV90_06050;Name=LFV90_06050;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LFV90_06050;pseudo=true DYDR01000007.1 Protein Homology CDS 40814 41337 . + 0 ID=cds-LFV90_06050;Parent=gene-LFV90_06050;Note=frameshifted;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016464.2;locus_tag=LFV90_06050;product=glycosyltransferase 61 family protein;pseudo=true;transl_table=11 DYDR01000007.1 tpg gene 41348 42406 . - . ID=gene-LFV90_06055;Name=LFV90_06055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_06055 DYDR01000007.1 Protein Homology CDS 41348 42406 . - 0 ID=cds-HJD61680.1;Parent=gene-LFV90_06055;Dbxref=NCBI_GP:HJD61680.1;Name=HJD61680.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477233.1;locus_tag=LFV90_06055;product=cell division protein ZapE;protein_id=HJD61680.1;transl_table=11 DYDR01000007.1 tpg pseudogene 42909 43475 . + . ID=gene-LFV90_06060;Name=LFV90_06060;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LFV90_06060;pseudo=true DYDR01000007.1 Protein Homology CDS 42909 43475 . + 0 ID=cds-LFV90_06060;Parent=gene-LFV90_06060;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024724.2;locus_tag=LFV90_06060;product=HD domain-containing protein;pseudo=true;transl_table=11 DYDR01000007.1 tpg gene 43537 44892 . - . ID=gene-LFV90_06065;Name=LFV90_06065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_06065 DYDR01000007.1 Protein Homology CDS 43537 44892 . - 0 ID=cds-HJD61681.1;Parent=gene-LFV90_06065;Dbxref=NCBI_GP:HJD61681.1;Name=HJD61681.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014412214.1;locus_tag=LFV90_06065;product=MFS transporter;protein_id=HJD61681.1;transl_table=11 DYDR01000007.1 tpg gene 45128 45215 . - . ID=gene-LFV90_06070;Name=LFV90_06070;gbkey=Gene;gene_biotype=tRNA;locus_tag=LFV90_06070 DYDR01000007.1 tRNAscan-SE tRNA 45128 45215 . - . ID=rna-LFV90_06070;Parent=gene-LFV90_06070;anticodon=(pos:complement(45179..45181));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=LFV90_06070;product=tRNA-Ser DYDR01000007.1 tRNAscan-SE exon 45128 45215 . - . ID=exon-LFV90_06070-1;Parent=rna-LFV90_06070;anticodon=(pos:complement(45179..45181));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=LFV90_06070;product=tRNA-Ser DYDR01000007.1 tpg gene 45232 45990 . - . ID=gene-LFV90_06075;Name=LFV90_06075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_06075 DYDR01000007.1 Protein Homology CDS 45232 45990 . - 0 ID=cds-HJD61682.1;Parent=gene-LFV90_06075;Dbxref=NCBI_GP:HJD61682.1;Name=HJD61682.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012151783.1;locus_tag=LFV90_06075;product=NTP transferase domain-containing protein;protein_id=HJD61682.1;transl_table=11 DYDR01000007.1 tpg gene 45992 46753 . - . ID=gene-LFV90_06080;Name=LFV90_06080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_06080 DYDR01000007.1 Protein Homology CDS 45992 46753 . - 0 ID=cds-HJD61683.1;Parent=gene-LFV90_06080;Dbxref=NCBI_GP:HJD61683.1;Name=HJD61683.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477238.1;locus_tag=LFV90_06080;product=YebC/PmpR family DNA-binding transcriptional regulator;protein_id=HJD61683.1;transl_table=11 DYDR01000007.1 tpg gene 46776 46901 . - . ID=gene-LFV90_06085;Name=ykgO;gbkey=Gene;gene=ykgO;gene_biotype=protein_coding;locus_tag=LFV90_06085 DYDR01000007.1 Protein Homology CDS 46776 46901 . - 0 ID=cds-HJD61684.1;Parent=gene-LFV90_06085;Dbxref=NCBI_GP:HJD61684.1;Name=HJD61684.1;gbkey=CDS;gene=ykgO;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012177066.1;locus_tag=LFV90_06085;product=type B 50S ribosomal protein L36;protein_id=HJD61684.1;transl_table=11 DYDR01000007.1 tpg gene 47696 47839 . - . ID=gene-LFV90_06090;Name=LFV90_06090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_06090 DYDR01000007.1 GeneMarkS-2+ CDS 47696 47839 . - 0 ID=cds-HJD61685.1;Parent=gene-LFV90_06090;Dbxref=NCBI_GP:HJD61685.1;Name=HJD61685.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_06090;product=hypothetical protein;protein_id=HJD61685.1;transl_table=11 DYDR01000007.1 tpg gene 47922 48203 . - . ID=gene-LFV90_06095;Name=LFV90_06095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_06095 DYDR01000007.1 GeneMarkS-2+ CDS 47922 48203 . - 0 ID=cds-HJD61686.1;Parent=gene-LFV90_06095;Dbxref=NCBI_GP:HJD61686.1;Name=HJD61686.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_06095;product=hypothetical protein;protein_id=HJD61686.1;transl_table=11 DYDR01000007.1 tpg gene 48213 48389 . - . ID=gene-LFV90_06100;Name=LFV90_06100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_06100 DYDR01000007.1 GeneMarkS-2+ CDS 48213 48389 . - 0 ID=cds-HJD61687.1;Parent=gene-LFV90_06100;Dbxref=NCBI_GP:HJD61687.1;Name=HJD61687.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_06100;product=hypothetical protein;protein_id=HJD61687.1;transl_table=11 DYDR01000007.1 tpg gene 48396 48725 . - . ID=gene-LFV90_06105;Name=LFV90_06105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_06105 DYDR01000007.1 GeneMarkS-2+ CDS 48396 48725 . - 0 ID=cds-HJD61688.1;Parent=gene-LFV90_06105;Dbxref=NCBI_GP:HJD61688.1;Name=HJD61688.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_06105;product=hypothetical protein;protein_id=HJD61688.1;transl_table=11 DYDR01000007.1 tpg gene 48744 48926 . - . ID=gene-LFV90_06110;Name=LFV90_06110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_06110 DYDR01000007.1 GeneMarkS-2+ CDS 48744 48926 . - 0 ID=cds-HJD61689.1;Parent=gene-LFV90_06110;Dbxref=NCBI_GP:HJD61689.1;Name=HJD61689.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_06110;product=hypothetical protein;protein_id=HJD61689.1;transl_table=11 DYDR01000007.1 tpg gene 48964 49233 . - . ID=gene-LFV90_06115;Name=LFV90_06115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_06115 DYDR01000007.1 GeneMarkS-2+ CDS 48964 49233 . - 0 ID=cds-HJD61690.1;Parent=gene-LFV90_06115;Dbxref=NCBI_GP:HJD61690.1;Name=HJD61690.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_06115;product=hypothetical protein;protein_id=HJD61690.1;transl_table=11 DYDR01000007.1 tpg gene 49404 49901 . + . ID=gene-LFV90_06120;Name=LFV90_06120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_06120 DYDR01000007.1 GeneMarkS-2+ CDS 49404 49901 . + 0 ID=cds-HJD61691.1;Parent=gene-LFV90_06120;Dbxref=NCBI_GP:HJD61691.1;Name=HJD61691.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_06120;product=hypothetical protein;protein_id=HJD61691.1;transl_table=11 DYDR01000007.1 tpg gene 49941 50567 . + . ID=gene-LFV90_06125;Name=LFV90_06125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_06125 DYDR01000007.1 Protein Homology CDS 49941 50567 . + 0 ID=cds-HJD61692.1;Parent=gene-LFV90_06125;Dbxref=NCBI_GP:HJD61692.1;Name=HJD61692.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012151787.1;locus_tag=LFV90_06125;product=hypothetical protein;protein_id=HJD61692.1;transl_table=11 DYDR01000007.1 tpg gene 51422 52123 . + . ID=gene-LFV90_06130;Name=LFV90_06130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_06130 DYDR01000007.1 Protein Homology CDS 51422 52123 . + 0 ID=cds-HJD61693.1;Parent=gene-LFV90_06130;Dbxref=NCBI_GP:HJD61693.1;Name=HJD61693.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477242.1;locus_tag=LFV90_06130;product=lytic transglycosylase domain-containing protein;protein_id=HJD61693.1;transl_table=11 DYDR01000007.1 tpg gene 52128 52631 . + . ID=gene-LFV90_06135;Name=LFV90_06135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_06135 DYDR01000007.1 Protein Homology CDS 52128 52631 . + 0 ID=cds-HJD61694.1;Parent=gene-LFV90_06135;Dbxref=NCBI_GP:HJD61694.1;Name=HJD61694.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012151790.1;locus_tag=LFV90_06135;product=DUF2532 domain-containing protein;protein_id=HJD61694.1;transl_table=11 DYDR01000007.1 tpg gene 52705 52905 . + . ID=gene-LFV90_06140;Name=LFV90_06140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_06140 DYDR01000007.1 GeneMarkS-2+ CDS 52705 52905 . + 0 ID=cds-HJD61695.1;Parent=gene-LFV90_06140;Dbxref=NCBI_GP:HJD61695.1;Name=HJD61695.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_06140;product=hypothetical protein;protein_id=HJD61695.1;transl_table=11 DYDR01000007.1 tpg gene 53107 53895 . + . ID=gene-LFV90_06145;Name=LFV90_06145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_06145 DYDR01000007.1 Protein Homology CDS 53107 53895 . + 0 ID=cds-HJD61696.1;Parent=gene-LFV90_06145;Dbxref=NCBI_GP:HJD61696.1;Name=HJD61696.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004597689.1;locus_tag=LFV90_06145;product=class I SAM-dependent methyltransferase;protein_id=HJD61696.1;transl_table=11 DYDR01000007.1 tpg gene 54076 55455 . + . ID=gene-LFV90_06150;Name=lpdA;gbkey=Gene;gene=lpdA;gene_biotype=protein_coding;locus_tag=LFV90_06150 DYDR01000007.1 Protein Homology CDS 54076 55455 . + 0 ID=cds-HJD61697.1;Parent=gene-LFV90_06150;Dbxref=NCBI_GP:HJD61697.1;Name=HJD61697.1;gbkey=CDS;gene=lpdA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017442860.1;locus_tag=LFV90_06150;product=dihydrolipoyl dehydrogenase;protein_id=HJD61697.1;transl_table=11 DYDR01000007.1 tpg gene 55782 57743 . + . ID=gene-LFV90_06155;Name=LFV90_06155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_06155 DYDR01000007.1 Protein Homology CDS 55782 57743 . + 0 ID=cds-HJD61698.1;Parent=gene-LFV90_06155;Dbxref=NCBI_GP:HJD61698.1;Name=HJD61698.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012719653.1;locus_tag=LFV90_06155;product=transglycosylase SLT domain-containing protein;protein_id=HJD61698.1;transl_table=11 DYDR01000007.1 tpg gene 57825 58082 . + . ID=gene-LFV90_06160;Name=LFV90_06160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_06160 DYDR01000007.1 GeneMarkS-2+ CDS 57825 58082 . + 0 ID=cds-HJD61699.1;Parent=gene-LFV90_06160;Dbxref=NCBI_GP:HJD61699.1;Name=HJD61699.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_06160;product=hypothetical protein;protein_id=HJD61699.1;transl_table=11 DYDR01000007.1 tpg gene 58119 58529 . + . ID=gene-LFV90_06165;Name=LFV90_06165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_06165 DYDR01000007.1 GeneMarkS-2+ CDS 58119 58529 . + 0 ID=cds-HJD61700.1;Parent=gene-LFV90_06165;Dbxref=NCBI_GP:HJD61700.1;Name=HJD61700.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_06165;product=hypothetical protein;protein_id=HJD61700.1;transl_table=11 DYDR01000007.1 tpg gene 58812 59771 . + . ID=gene-LFV90_06170;Name=LFV90_06170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_06170 DYDR01000007.1 Protein Homology CDS 58812 59771 . + 0 ID=cds-HJD61701.1;Parent=gene-LFV90_06170;Dbxref=NCBI_GP:HJD61701.1;Name=HJD61701.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004599449.1;locus_tag=LFV90_06170;product=LD-carboxypeptidase;protein_id=HJD61701.1;transl_table=11 DYDR01000007.1 tpg gene 60058 62535 . - . ID=gene-LFV90_06175;Name=LFV90_06175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_06175 DYDR01000007.1 Protein Homology CDS 60058 62535 . - 0 ID=cds-HJD61702.1;Parent=gene-LFV90_06175;Dbxref=NCBI_GP:HJD61702.1;Name=HJD61702.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477253.1;locus_tag=LFV90_06175;product=PD-(D/E)XK nuclease family protein;protein_id=HJD61702.1;transl_table=11 DYDR01000007.1 tpg gene 62634 64382 . + . ID=gene-LFV90_06180;Name=LFV90_06180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_06180 DYDR01000007.1 Protein Homology CDS 62634 64382 . + 0 ID=cds-HJD61703.1;Parent=gene-LFV90_06180;Dbxref=NCBI_GP:HJD61703.1;Name=HJD61703.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004598912.1;locus_tag=LFV90_06180;product=ankyrin repeat domain-containing protein;protein_id=HJD61703.1;transl_table=11 DYDR01000007.1 tpg gene 64557 65168 . - . ID=gene-LFV90_06185;Name=LFV90_06185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_06185 DYDR01000007.1 Protein Homology CDS 64557 65168 . - 0 ID=cds-HJD61704.1;Parent=gene-LFV90_06185;Dbxref=NCBI_GP:HJD61704.1;Name=HJD61704.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012151798.1;locus_tag=LFV90_06185;product=hypothetical protein;protein_id=HJD61704.1;transl_table=11 DYDR01000007.1 tpg gene 65307 65573 . - . ID=gene-LFV90_06190;Name=LFV90_06190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_06190 DYDR01000007.1 Protein Homology CDS 65307 65573 . - 0 ID=cds-HJD61705.1;Parent=gene-LFV90_06190;Dbxref=NCBI_GP:HJD61705.1;Name=HJD61705.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016728273.1;locus_tag=LFV90_06190;product=hypothetical protein;protein_id=HJD61705.1;transl_table=11 DYDR01000007.1 tpg gene 65789 66010 . - . ID=gene-LFV90_06195;Name=LFV90_06195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_06195 DYDR01000007.1 GeneMarkS-2+ CDS 65789 66010 . - 0 ID=cds-HJD61706.1;Parent=gene-LFV90_06195;Dbxref=NCBI_GP:HJD61706.1;Name=HJD61706.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_06195;product=hypothetical protein;protein_id=HJD61706.1;transl_table=11 DYDR01000007.1 tpg gene 66010 66279 . - . ID=gene-LFV90_06200;Name=LFV90_06200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_06200 DYDR01000007.1 GeneMarkS-2+ CDS 66010 66279 . - 0 ID=cds-HJD61707.1;Parent=gene-LFV90_06200;Dbxref=NCBI_GP:HJD61707.1;Name=HJD61707.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_06200;product=hypothetical protein;protein_id=HJD61707.1;transl_table=11 DYDR01000007.1 tpg gene 66590 67165 . - . ID=gene-LFV90_06205;Name=LFV90_06205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_06205 DYDR01000007.1 GeneMarkS-2+ CDS 66590 67165 . - 0 ID=cds-HJD61708.1;Parent=gene-LFV90_06205;Dbxref=NCBI_GP:HJD61708.1;Name=HJD61708.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_06205;product=hypothetical protein;protein_id=HJD61708.1;transl_table=11 DYDR01000007.1 tpg gene 67287 67484 . - . ID=gene-LFV90_06210;Name=LFV90_06210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_06210 DYDR01000007.1 GeneMarkS-2+ CDS 67287 67484 . - 0 ID=cds-HJD61709.1;Parent=gene-LFV90_06210;Dbxref=NCBI_GP:HJD61709.1;Name=HJD61709.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_06210;product=hypothetical protein;protein_id=HJD61709.1;transl_table=11 DYDR01000007.1 tpg gene 68034 69686 . - . ID=gene-LFV90_06215;Name=groL;gbkey=Gene;gene=groL;gene_biotype=protein_coding;locus_tag=LFV90_06215 DYDR01000007.1 Protein Homology CDS 68034 69686 . - 0 ID=cds-HJD61710.1;Parent=gene-LFV90_06215;Dbxref=NCBI_GP:HJD61710.1;Name=HJD61710.1;Note=60 kDa chaperone family%3B promotes refolding of misfolded polypeptides especially under stressful conditions%3B forms two stacked rings of heptamers to form a barrel-shaped 14mer%3B ends can be capped by GroES%3B misfolded proteins enter the barrel where they are refolded when GroES binds;gbkey=CDS;gene=groL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004596265.1;locus_tag=LFV90_06215;product=chaperonin GroEL;protein_id=HJD61710.1;transl_table=11 DYDR01000007.1 tpg gene 69713 70000 . - . ID=gene-LFV90_06220;Name=LFV90_06220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_06220 DYDR01000007.1 Protein Homology CDS 69713 70000 . - 0 ID=cds-HJD61711.1;Parent=gene-LFV90_06220;Dbxref=NCBI_GP:HJD61711.1;Name=HJD61711.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017442455.1;locus_tag=LFV90_06220;product=co-chaperone GroES;protein_id=HJD61711.1;transl_table=11 DYDR01000007.1 tpg gene 70292 70681 . + . ID=gene-LFV90_06225;Name=LFV90_06225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_06225 DYDR01000007.1 Protein Homology CDS 70292 70681 . + 0 ID=cds-HJD61712.1;Parent=gene-LFV90_06225;Dbxref=NCBI_GP:HJD61712.1;Name=HJD61712.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012151800.1;locus_tag=LFV90_06225;product=bifunctional (p)ppGpp synthetase/guanosine-3'%2C5'-bis(diphosphate) 3'-pyrophosphohydrolase;protein_id=HJD61712.1;transl_table=11 DYDR01000007.1 tpg gene 70956 71405 . - . ID=gene-LFV90_06230;Name=LFV90_06230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_06230 DYDR01000007.1 Protein Homology CDS 70956 71405 . - 0 ID=cds-HJD61713.1;Parent=gene-LFV90_06230;Dbxref=NCBI_GP:HJD61713.1;Name=HJD61713.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477262.1;locus_tag=LFV90_06230;product=HD domain-containing protein;protein_id=HJD61713.1;transl_table=11 DYDR01000007.1 tpg gene 71938 73623 . + . ID=gene-LFV90_06235;Name=LFV90_06235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_06235 DYDR01000007.1 Protein Homology CDS 71938 73623 . + 0 ID=cds-HJD61714.1;Parent=gene-LFV90_06235;Dbxref=NCBI_GP:HJD61714.1;Name=HJD61714.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012271.2;locus_tag=LFV90_06235;product=fibronectin type III domain-containing protein;protein_id=HJD61714.1;transl_table=11 DYDR01000007.1 tpg gene 74138 74455 . + . ID=gene-LFV90_06240;Name=LFV90_06240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_06240 DYDR01000007.1 Protein Homology CDS 74138 74455 . + 0 ID=cds-HJD61715.1;Parent=gene-LFV90_06240;Dbxref=NCBI_GP:HJD61715.1;Name=HJD61715.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477265.1;locus_tag=LFV90_06240;product=hypothetical protein;protein_id=HJD61715.1;transl_table=11 DYDR01000007.1 tpg gene 75352 75579 . - . ID=gene-LFV90_06245;Name=LFV90_06245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_06245 DYDR01000007.1 GeneMarkS-2+ CDS 75352 75579 . - 0 ID=cds-HJD61716.1;Parent=gene-LFV90_06245;Dbxref=NCBI_GP:HJD61716.1;Name=HJD61716.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_06245;product=hypothetical protein;protein_id=HJD61716.1;transl_table=11 DYDR01000007.1 tpg pseudogene 75932 76000 . - . ID=gene-LFV90_06250;Name=LFV90_06250;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LFV90_06250;pseudo=true DYDR01000007.1 Protein Homology CDS 75932 76000 . - 0 ID=cds-LFV90_06250;Parent=gene-LFV90_06250;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR03777.1;locus_tag=LFV90_06250;product=palindromic element RPE4 domain-containing protein;pseudo=true;transl_table=11 DYDR01000007.1 tpg gene 76078 77185 . - . ID=gene-LFV90_06255;Name=prfB;gbkey=Gene;gene=prfB;gene_biotype=protein_coding;locus_tag=LFV90_06255 DYDR01000007.1 Protein Homology CDS 77117 77185 . - 0 ID=cds-HJD61717.1;Parent=gene-LFV90_06255;Dbxref=NCBI_GP:HJD61717.1;Name=HJD61717.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;gene=prfB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477267.1;locus_tag=LFV90_06255;product=peptide chain release factor 2;protein_id=HJD61717.1;transl_table=11 DYDR01000007.1 Protein Homology CDS 76078 77115 . - 0 ID=cds-HJD61717.1;Parent=gene-LFV90_06255;Dbxref=NCBI_GP:HJD61717.1;Name=HJD61717.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;gene=prfB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477267.1;locus_tag=LFV90_06255;product=peptide chain release factor 2;protein_id=HJD61717.1;transl_table=11 DYDR01000007.1 tpg gene 77350 79152 . + . ID=gene-LFV90_06260;Name=lepA;gbkey=Gene;gene=lepA;gene_biotype=protein_coding;locus_tag=LFV90_06260 DYDR01000007.1 Protein Homology CDS 77350 79152 . + 0 ID=cds-HJD61718.1;Parent=gene-LFV90_06260;Dbxref=NCBI_GP:HJD61718.1;Name=HJD61718.1;gbkey=CDS;gene=lepA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011271316.1;locus_tag=LFV90_06260;product=translation elongation factor 4;protein_id=HJD61718.1;transl_table=11 DYDR01000007.1 tpg gene 79398 79733 . - . ID=gene-LFV90_06265;Name=LFV90_06265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_06265 DYDR01000007.1 GeneMarkS-2+ CDS 79398 79733 . - 0 ID=cds-HJD61719.1;Parent=gene-LFV90_06265;Dbxref=NCBI_GP:HJD61719.1;Name=HJD61719.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_06265;product=hypothetical protein;protein_id=HJD61719.1;transl_table=11 DYDR01000007.1 tpg gene 79910 80077 . - . ID=gene-LFV90_06270;Name=LFV90_06270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_06270 DYDR01000007.1 GeneMarkS-2+ CDS 79910 80077 . - 0 ID=cds-HJD61720.1;Parent=gene-LFV90_06270;Dbxref=NCBI_GP:HJD61720.1;Name=HJD61720.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_06270;product=hypothetical protein;protein_id=HJD61720.1;transl_table=11 DYDR01000007.1 tpg gene 80593 83880 . - . ID=gene-LFV90_06275;Name=ileS;gbkey=Gene;gene=ileS;gene_biotype=protein_coding;locus_tag=LFV90_06275 DYDR01000007.1 Protein Homology CDS 80593 83880 . - 0 ID=cds-HJD61721.1;Parent=gene-LFV90_06275;Dbxref=NCBI_GP:HJD61721.1;Name=HJD61721.1;gbkey=CDS;gene=ileS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477271.1;locus_tag=LFV90_06275;product=isoleucine--tRNA ligase;protein_id=HJD61721.1;transl_table=11 DYDR01000007.1 tpg gene 83954 84667 . + . ID=gene-LFV90_06280;Name=LFV90_06280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_06280 DYDR01000007.1 Protein Homology CDS 83954 84667 . + 0 ID=cds-HJD61722.1;Parent=gene-LFV90_06280;Dbxref=NCBI_GP:HJD61722.1;Name=HJD61722.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477272.1;locus_tag=LFV90_06280;product=queuosine precursor transporter;protein_id=HJD61722.1;transl_table=11 DYDR01000007.1 tpg gene 84953 86008 . - . ID=gene-LFV90_06285;Name=LFV90_06285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_06285 DYDR01000007.1 Protein Homology CDS 84953 86008 . - 0 ID=cds-HJD61723.1;Parent=gene-LFV90_06285;Dbxref=NCBI_GP:HJD61723.1;Name=HJD61723.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017442465.1;locus_tag=LFV90_06285;product=AI-2E family transporter;protein_id=HJD61723.1;transl_table=11 DYDR01000007.1 tpg gene 86028 86567 . - . ID=gene-LFV90_06290;Name=grpE;gbkey=Gene;gene=grpE;gene_biotype=protein_coding;locus_tag=LFV90_06290 DYDR01000007.1 Protein Homology CDS 86028 86567 . - 0 ID=cds-HJD61724.1;Parent=gene-LFV90_06290;Dbxref=NCBI_GP:HJD61724.1;Name=HJD61724.1;gbkey=CDS;gene=grpE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477275.1;locus_tag=LFV90_06290;product=nucleotide exchange factor GrpE;protein_id=HJD61724.1;transl_table=11 DYDR01000007.1 tpg gene 86716 87438 . + . ID=gene-LFV90_06295;Name=rph;gbkey=Gene;gene=rph;gene_biotype=protein_coding;locus_tag=LFV90_06295 DYDR01000007.1 Protein Homology CDS 86716 87438 . + 0 ID=cds-HJD61725.1;Parent=gene-LFV90_06295;Dbxref=NCBI_GP:HJD61725.1;Name=HJD61725.1;gbkey=CDS;gene=rph;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004596258.1;locus_tag=LFV90_06295;product=ribonuclease PH;protein_id=HJD61725.1;transl_table=11 DYDR01000007.1 tpg gene 87435 88184 . + . ID=gene-LFV90_06300;Name=LFV90_06300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_06300 DYDR01000007.1 Protein Homology CDS 87435 88184 . + 0 ID=cds-HJD61726.1;Parent=gene-LFV90_06300;Dbxref=NCBI_GP:HJD61726.1;Name=HJD61726.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012151814.1;locus_tag=LFV90_06300;product=TlyA family RNA methyltransferase;protein_id=HJD61726.1;transl_table=11 DYDR01000007.1 tpg gene 88181 88588 . - . ID=gene-LFV90_06305;Name=LFV90_06305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_06305 DYDR01000007.1 Protein Homology CDS 88181 88588 . - 0 ID=cds-HJD61727.1;Parent=gene-LFV90_06305;Dbxref=NCBI_GP:HJD61727.1;Name=HJD61727.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477278.1;locus_tag=LFV90_06305;product=Rrf2 family transcriptional regulator;protein_id=HJD61727.1;transl_table=11 DYDR01000007.1 tpg gene 88927 89208 . - . ID=gene-LFV90_06310;Name=LFV90_06310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_06310 DYDR01000007.1 GeneMarkS-2+ CDS 88927 89208 . - 0 ID=cds-HJD61728.1;Parent=gene-LFV90_06310;Dbxref=NCBI_GP:HJD61728.1;Name=HJD61728.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_06310;product=hypothetical protein;protein_id=HJD61728.1;transl_table=11 DYDR01000007.1 tpg gene 89375 89701 . + . ID=gene-LFV90_06315;Name=LFV90_06315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_06315 DYDR01000007.1 GeneMarkS-2+ CDS 89375 89701 . + 0 ID=cds-HJD61729.1;Parent=gene-LFV90_06315;Dbxref=NCBI_GP:HJD61729.1;Name=HJD61729.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_06315;product=hypothetical protein;protein_id=HJD61729.1;transl_table=11 DYDR01000007.1 tpg gene 89698 89835 . + . ID=gene-LFV90_06320;Name=LFV90_06320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_06320 DYDR01000007.1 GeneMarkS-2+ CDS 89698 89835 . + 0 ID=cds-HJD61730.1;Parent=gene-LFV90_06320;Dbxref=NCBI_GP:HJD61730.1;Name=HJD61730.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_06320;product=hypothetical protein;protein_id=HJD61730.1;transl_table=11 DYDR01000007.1 tpg gene 90032 90538 . + . ID=gene-LFV90_06325;Name=LFV90_06325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_06325 DYDR01000007.1 Protein Homology CDS 90032 90538 . + 0 ID=cds-HJD61731.1;Parent=gene-LFV90_06325;Dbxref=NCBI_GP:HJD61731.1;Name=HJD61731.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041804650.1;locus_tag=LFV90_06325;product=ribosome maturation factor RimP;protein_id=HJD61731.1;transl_table=11 DYDR01000007.1 tpg gene 90547 92049 . + . ID=gene-LFV90_06330;Name=nusA;gbkey=Gene;gene=nusA;gene_biotype=protein_coding;locus_tag=LFV90_06330 DYDR01000007.1 Protein Homology CDS 90547 92049 . + 0 ID=cds-HJD61732.1;Parent=gene-LFV90_06330;Dbxref=NCBI_GP:HJD61732.1;Name=HJD61732.1;gbkey=CDS;gene=nusA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012151817.1;locus_tag=LFV90_06330;product=transcription termination factor NusA;protein_id=HJD61732.1;transl_table=11 DYDR01000007.1 tpg gene 92234 94720 . + . ID=gene-LFV90_06335;Name=infB;gbkey=Gene;gene=infB;gene_biotype=protein_coding;locus_tag=LFV90_06335 DYDR01000007.1 Protein Homology CDS 92234 94720 . + 0 ID=cds-HJD61733.1;Parent=gene-LFV90_06335;Dbxref=NCBI_GP:HJD61733.1;Name=HJD61733.1;gbkey=CDS;gene=infB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012151818.1;locus_tag=LFV90_06335;product=translation initiation factor IF-2;protein_id=HJD61733.1;transl_table=11 DYDR01000007.1 tpg gene 94930 96849 . + . ID=gene-LFV90_06340;Name=uvrC;gbkey=Gene;gene=uvrC;gene_biotype=protein_coding;locus_tag=LFV90_06340 DYDR01000007.1 Protein Homology CDS 94930 96849 . + 0 ID=cds-HJD61734.1;Parent=gene-LFV90_06340;Dbxref=NCBI_GP:HJD61734.1;Name=HJD61734.1;gbkey=CDS;gene=uvrC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017442351.1;locus_tag=LFV90_06340;product=excinuclease ABC subunit UvrC;protein_id=HJD61734.1;transl_table=11 DYDR01000007.1 tpg gene 96854 97042 . - . ID=gene-LFV90_06345;Name=LFV90_06345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_06345 DYDR01000007.1 GeneMarkS-2+ CDS 96854 97042 . - 0 ID=cds-HJD61735.1;Parent=gene-LFV90_06345;Dbxref=NCBI_GP:HJD61735.1;Name=HJD61735.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_06345;product=hypothetical protein;protein_id=HJD61735.1;transl_table=11 DYDR01000007.1 tpg gene 97365 97532 . - . ID=gene-LFV90_06350;Name=LFV90_06350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_06350 DYDR01000007.1 GeneMarkS-2+ CDS 97365 97532 . - 0 ID=cds-HJD61736.1;Parent=gene-LFV90_06350;Dbxref=NCBI_GP:HJD61736.1;Name=HJD61736.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_06350;product=hypothetical protein;protein_id=HJD61736.1;transl_table=11 DYDR01000007.1 tpg gene 97579 98367 . - . ID=gene-LFV90_06355;Name=LFV90_06355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_06355 DYDR01000007.1 GeneMarkS-2+ CDS 97579 98367 . - 0 ID=cds-HJD61737.1;Parent=gene-LFV90_06355;Dbxref=NCBI_GP:HJD61737.1;Name=HJD61737.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_06355;product=hypothetical protein;protein_id=HJD61737.1;transl_table=11 DYDR01000007.1 tpg gene 98908 99075 . + . ID=gene-LFV90_06360;Name=LFV90_06360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_06360 DYDR01000007.1 GeneMarkS-2+ CDS 98908 99075 . + 0 ID=cds-HJD61738.1;Parent=gene-LFV90_06360;Dbxref=NCBI_GP:HJD61738.1;Name=HJD61738.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_06360;product=hypothetical protein;protein_id=HJD61738.1;transl_table=11 DYDR01000007.1 tpg gene 99273 100508 . - . ID=gene-LFV90_06365;Name=tyrS;gbkey=Gene;gene=tyrS;gene_biotype=protein_coding;locus_tag=LFV90_06365 DYDR01000007.1 Protein Homology CDS 99273 100508 . - 0 ID=cds-HJD61739.1;Parent=gene-LFV90_06365;Dbxref=NCBI_GP:HJD61739.1;Name=HJD61739.1;gbkey=CDS;gene=tyrS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011190994.1;locus_tag=LFV90_06365;product=tyrosine--tRNA ligase;protein_id=HJD61739.1;transl_table=11 DYDR01000007.1 tpg gene 100794 101330 . + . ID=gene-LFV90_06370;Name=LFV90_06370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_06370 DYDR01000007.1 GeneMarkS-2+ CDS 100794 101330 . + 0 ID=cds-HJD61740.1;Parent=gene-LFV90_06370;Dbxref=NCBI_GP:HJD61740.1;Name=HJD61740.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_06370;product=hypothetical protein;protein_id=HJD61740.1;transl_table=11 DYDR01000007.1 tpg gene 101312 101734 . + . ID=gene-LFV90_06375;Name=LFV90_06375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_06375 DYDR01000007.1 GeneMarkS-2+ CDS 101312 101734 . + 0 ID=cds-HJD61741.1;Parent=gene-LFV90_06375;Dbxref=NCBI_GP:HJD61741.1;Name=HJD61741.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_06375;product=hypothetical protein;protein_id=HJD61741.1;transl_table=11 DYDR01000007.1 tpg gene 102227 102799 . + . ID=gene-LFV90_06380;Name=LFV90_06380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_06380 DYDR01000007.1 GeneMarkS-2+ CDS 102227 102799 . + 0 ID=cds-HJD61742.1;Parent=gene-LFV90_06380;Dbxref=NCBI_GP:HJD61742.1;Name=HJD61742.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_06380;product=hypothetical protein;protein_id=HJD61742.1;transl_table=11 DYDR01000007.1 tpg gene 103011 103571 . - . ID=gene-LFV90_06385;Name=LFV90_06385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_06385 DYDR01000007.1 Protein Homology CDS 103011 103571 . - 0 ID=cds-HJD61743.1;Parent=gene-LFV90_06385;Dbxref=NCBI_GP:HJD61743.1;Name=HJD61743.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015325.2;locus_tag=LFV90_06385;product=flavodoxin family protein;protein_id=HJD61743.1;transl_table=11 DYDR01000007.1 tpg gene 103716 103793 . - . ID=gene-LFV90_06390;Name=LFV90_06390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_06390 DYDR01000007.1 Protein Homology CDS 103716 103793 . - 0 ID=cds-HJD61744.1;Parent=gene-LFV90_06390;Dbxref=NCBI_GP:HJD61744.1;Name=HJD61744.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR03777.1;locus_tag=LFV90_06390;product=hypothetical protein;protein_id=HJD61744.1;transl_table=11 DYDR01000007.1 tpg pseudogene 103771 103827 . + . ID=gene-LFV90_06395;Name=LFV90_06395;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LFV90_06395;pseudo=true DYDR01000007.1 Protein Homology CDS 103771 103827 . + 0 ID=cds-LFV90_06395;Parent=gene-LFV90_06395;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR03777.1;locus_tag=LFV90_06395;product=hypothetical protein;pseudo=true;transl_table=11 DYDR01000007.1 tpg pseudogene 103884 104522 . - . ID=gene-LFV90_06400;Name=LFV90_06400;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LFV90_06400;pseudo=true DYDR01000007.1 Protein Homology CDS 103884 104522 . - 0 ID=cds-LFV90_06400;Parent=gene-LFV90_06400;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017442398.1;locus_tag=LFV90_06400;product=3-oxoacid CoA-transferase subunit B;pseudo=true;transl_table=11 DYDR01000007.1 tpg pseudogene 104523 105222 . - . ID=gene-LFV90_06405;Name=LFV90_06405;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LFV90_06405;pseudo=true DYDR01000007.1 Protein Homology CDS 104523 105222 . - 0 ID=cds-LFV90_06405;Parent=gene-LFV90_06405;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014409397.1;locus_tag=LFV90_06405;product=CoA transferase subunit A;pseudo=true;transl_table=11 DYDR01000007.1 tpg gene 105506 106567 . + . ID=gene-LFV90_06410;Name=LFV90_06410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_06410 DYDR01000007.1 Protein Homology CDS 105506 106567 . + 0 ID=cds-HJD61745.1;Parent=gene-LFV90_06410;Dbxref=NCBI_GP:HJD61745.1;Name=HJD61745.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477665.1;locus_tag=LFV90_06410;product=hypothetical protein;protein_id=HJD61745.1;transl_table=11 DYDR01000007.1 tpg gene 106694 108934 . + . ID=gene-LFV90_06415;Name=LFV90_06415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_06415 DYDR01000007.1 Protein Homology CDS 106694 108934 . + 0 ID=cds-HJD61746.1;Parent=gene-LFV90_06415;Dbxref=NCBI_GP:HJD61746.1;Name=HJD61746.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017442396.1;locus_tag=LFV90_06415;product=ATP-dependent DNA helicase RecG;protein_id=HJD61746.1;transl_table=11 DYDR01000007.1 tpg gene 109074 109148 . + . ID=gene-LFV90_06420;Name=LFV90_06420;gbkey=Gene;gene_biotype=tRNA;locus_tag=LFV90_06420 DYDR01000007.1 tRNAscan-SE tRNA 109074 109148 . + . ID=rna-LFV90_06420;Parent=gene-LFV90_06420;anticodon=(pos:109106..109108);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=LFV90_06420;product=tRNA-Cys DYDR01000007.1 tRNAscan-SE exon 109074 109148 . + . ID=exon-LFV90_06420-1;Parent=rna-LFV90_06420;anticodon=(pos:109106..109108);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=LFV90_06420;product=tRNA-Cys DYDR01000007.1 tpg gene 109167 110084 . + . ID=gene-LFV90_06425;Name=LFV90_06425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_06425 DYDR01000007.1 Protein Homology CDS 109167 110084 . + 0 ID=cds-HJD61747.1;Parent=gene-LFV90_06425;Dbxref=NCBI_GP:HJD61747.1;Name=HJD61747.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477663.1;locus_tag=LFV90_06425;product=site-specific tyrosine recombinase XerD;protein_id=HJD61747.1;transl_table=11 DYDR01000007.1 tpg gene 110167 111009 . + . ID=gene-LFV90_06430;Name=LFV90_06430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_06430 DYDR01000007.1 Protein Homology CDS 110167 111009 . + 0 ID=cds-HJD61748.1;Parent=gene-LFV90_06430;Dbxref=NCBI_GP:HJD61748.1;Name=HJD61748.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012151837.1;locus_tag=LFV90_06430;product=DUF5410 domain-containing protein;protein_id=HJD61748.1;transl_table=11 DYDR01000007.1 tpg pseudogene 111068 111477 . - . ID=gene-LFV90_06435;Name=LFV90_06435;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LFV90_06435;pseudo=true DYDR01000007.1 Protein Homology CDS 111068 111477 . - 0 ID=cds-LFV90_06435;Parent=gene-LFV90_06435;Note=frameshifted;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018684.2;locus_tag=LFV90_06435;product=lysozyme inhibitor LprI family protein;pseudo=true;transl_table=11 DYDR01000007.1 tpg gene 111526 111849 . - . ID=gene-LFV90_06440;Name=LFV90_06440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_06440 DYDR01000007.1 GeneMarkS-2+ CDS 111526 111849 . - 0 ID=cds-HJD61749.1;Parent=gene-LFV90_06440;Dbxref=NCBI_GP:HJD61749.1;Name=HJD61749.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_06440;product=hypothetical protein;protein_id=HJD61749.1;transl_table=11 DYDR01000007.1 tpg gene 111789 112538 . - . ID=gene-LFV90_06445;Name=LFV90_06445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_06445 DYDR01000007.1 GeneMarkS-2+ CDS 111789 112538 . - 0 ID=cds-HJD61750.1;Parent=gene-LFV90_06445;Dbxref=NCBI_GP:HJD61750.1;Name=HJD61750.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_06445;product=hypothetical protein;protein_id=HJD61750.1;transl_table=11 DYDR01000007.1 tpg gene 112802 113746 . - . ID=gene-LFV90_06450;Name=mdh;gbkey=Gene;gene=mdh;gene_biotype=protein_coding;locus_tag=LFV90_06450 DYDR01000007.1 Protein Homology CDS 112802 113746 . - 0 ID=cds-HJD61751.1;Parent=gene-LFV90_06450;Dbxref=NCBI_GP:HJD61751.1;Name=HJD61751.1;gbkey=CDS;gene=mdh;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477313.1;locus_tag=LFV90_06450;product=malate dehydrogenase;protein_id=HJD61751.1;transl_table=11 DYDR01000007.1 tpg gene 113887 114039 . - . ID=gene-LFV90_06455;Name=LFV90_06455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_06455 DYDR01000007.1 GeneMarkS-2+ CDS 113887 114039 . - 0 ID=cds-HJD61752.1;Parent=gene-LFV90_06455;Dbxref=NCBI_GP:HJD61752.1;Name=HJD61752.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_06455;product=hypothetical protein;protein_id=HJD61752.1;transl_table=11 DYDR01000007.1 tpg pseudogene 114093 114599 . - . ID=gene-LFV90_06460;Name=LFV90_06460;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LFV90_06460;pseudo=true DYDR01000007.1 Protein Homology CDS 114093 114599 . - 0 ID=cds-LFV90_06460;Parent=gene-LFV90_06460;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012151902.1;locus_tag=LFV90_06460;product=efflux RND transporter permease subunit;pseudo=true;transl_table=11 DYDR01000007.1 tpg gene 114874 115566 . - . ID=gene-LFV90_06465;Name=LFV90_06465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_06465 DYDR01000007.1 Protein Homology CDS 114874 115566 . - 0 ID=cds-HJD61753.1;Parent=gene-LFV90_06465;Dbxref=NCBI_GP:HJD61753.1;Name=HJD61753.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR01730.1;locus_tag=LFV90_06465;product=efflux RND transporter periplasmic adaptor subunit;protein_id=HJD61753.1;transl_table=11 DYDR01000007.1 tpg gene 115823 116293 . - . ID=gene-LFV90_06470;Name=LFV90_06470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_06470 DYDR01000007.1 Protein Homology CDS 115823 116293 . - 0 ID=cds-HJD61754.1;Parent=gene-LFV90_06470;Dbxref=NCBI_GP:HJD61754.1;Name=HJD61754.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014385.2;locus_tag=LFV90_06470;product=TolC family protein;protein_id=HJD61754.1;transl_table=11 DYDR01000007.1 tpg gene 116272 116919 . - . ID=gene-LFV90_06475;Name=LFV90_06475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_06475 DYDR01000007.1 Protein Homology CDS 116272 116919 . - 0 ID=cds-HJD61755.1;Parent=gene-LFV90_06475;Dbxref=NCBI_GP:HJD61755.1;Name=HJD61755.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014385.2;locus_tag=LFV90_06475;product=TolC family protein;protein_id=HJD61755.1;transl_table=11 DYDR01000007.1 tpg gene 117208 118230 . - . ID=gene-LFV90_06480;Name=LFV90_06480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_06480 DYDR01000007.1 Protein Homology CDS 117208 118230 . - 0 ID=cds-HJD61756.1;Parent=gene-LFV90_06480;Dbxref=NCBI_GP:HJD61756.1;Name=HJD61756.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477320.1;locus_tag=LFV90_06480;product=glycosyltransferase family 4 protein;protein_id=HJD61756.1;transl_table=11 DYDR01000007.1 tpg pseudogene 118292 119157 . - . ID=gene-LFV90_06485;Name=LFV90_06485;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LFV90_06485;pseudo=true DYDR01000007.1 Protein Homology CDS 118292 119157 . - 0 ID=cds-LFV90_06485;Parent=gene-LFV90_06485;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012462293.1;locus_tag=LFV90_06485;product=Rpn family recombination-promoting nuclease/putative transposase;pseudo=true;transl_table=11 DYDR01000007.1 tpg gene 119246 120055 . + . ID=gene-LFV90_06490;Name=dapF;gbkey=Gene;gene=dapF;gene_biotype=protein_coding;locus_tag=LFV90_06490 DYDR01000007.1 Protein Homology CDS 119246 120055 . + 0 ID=cds-HJD61757.1;Parent=gene-LFV90_06490;Dbxref=NCBI_GP:HJD61757.1;Name=HJD61757.1;gbkey=CDS;gene=dapF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477321.1;locus_tag=LFV90_06490;product=diaminopimelate epimerase;protein_id=HJD61757.1;transl_table=11 DYDR01000007.1 tpg gene 120045 121295 . + . ID=gene-LFV90_06495;Name=mtaB;gbkey=Gene;gene=mtaB;gene_biotype=protein_coding;locus_tag=LFV90_06495 DYDR01000007.1 Protein Homology CDS 120045 121295 . + 0 ID=cds-HJD61758.1;Parent=gene-LFV90_06495;Dbxref=NCBI_GP:HJD61758.1;Name=HJD61758.1;gbkey=CDS;gene=mtaB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004995780.1;locus_tag=LFV90_06495;product=tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase MtaB;protein_id=HJD61758.1;transl_table=11 DYDR01000007.1 tpg gene 121519 122568 . + . ID=gene-LFV90_06500;Name=pheS;gbkey=Gene;gene=pheS;gene_biotype=protein_coding;locus_tag=LFV90_06500 DYDR01000007.1 Protein Homology CDS 121519 122568 . + 0 ID=cds-HJD61759.1;Parent=gene-LFV90_06500;Dbxref=NCBI_GP:HJD61759.1;Name=HJD61759.1;gbkey=CDS;gene=pheS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477323.1;locus_tag=LFV90_06500;product=phenylalanine--tRNA ligase subunit alpha;protein_id=HJD61759.1;transl_table=11 DYDR01000007.1 tpg gene 122565 125054 . + . ID=gene-LFV90_06505;Name=pheT;gbkey=Gene;gene=pheT;gene_biotype=protein_coding;locus_tag=LFV90_06505 DYDR01000007.1 Protein Homology CDS 122565 125054 . + 0 ID=cds-HJD61760.1;Parent=gene-LFV90_06505;Dbxref=NCBI_GP:HJD61760.1;Name=HJD61760.1;gbkey=CDS;gene=pheT;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477324.1;locus_tag=LFV90_06505;product=phenylalanine--tRNA ligase subunit beta;protein_id=HJD61760.1;transl_table=11 DYDR01000007.1 tpg gene 125059 126198 . + . ID=gene-LFV90_06510;Name=dnaN;gbkey=Gene;gene=dnaN;gene_biotype=protein_coding;locus_tag=LFV90_06510 DYDR01000007.1 Protein Homology CDS 125059 126198 . + 0 ID=cds-HJD61761.1;Parent=gene-LFV90_06510;Dbxref=NCBI_GP:HJD61761.1;Name=HJD61761.1;gbkey=CDS;gene=dnaN;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011190866.1;locus_tag=LFV90_06510;product=DNA polymerase III subunit beta;protein_id=HJD61761.1;transl_table=11 DYDR01000007.1 tpg gene 127211 127738 . - . ID=gene-LFV90_06515;Name=LFV90_06515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_06515 DYDR01000007.1 Protein Homology CDS 127211 127738 . - 0 ID=cds-HJD61762.1;Parent=gene-LFV90_06515;Dbxref=NCBI_GP:HJD61762.1;Name=HJD61762.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011271208.1;locus_tag=LFV90_06515;product=hypothetical protein;protein_id=HJD61762.1;transl_table=11 DYDR01000007.1 tpg pseudogene 127945 130090 . + . ID=gene-LFV90_06520;Name=LFV90_06520;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LFV90_06520;pseudo=true DYDR01000007.1 Protein Homology CDS 127945 130090 . + 0 ID=cds-LFV90_06520;Parent=gene-LFV90_06520;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014392383.1;locus_tag=LFV90_06520;product=alpha-2-macroglobulin family protein;pseudo=true;transl_table=11 DYDR01000007.1 tpg gene 130585 131862 . + . ID=gene-LFV90_06525;Name=LFV90_06525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_06525 DYDR01000007.1 Protein Homology CDS 130585 131862 . + 0 ID=cds-HJD61763.1;Parent=gene-LFV90_06525;Dbxref=NCBI_GP:HJD61763.1;Name=HJD61763.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477332.1;locus_tag=LFV90_06525;product=amino acid permease;protein_id=HJD61763.1;transl_table=11 DYDR01000007.1 tpg pseudogene 132161 133516 . + . ID=gene-LFV90_06530;Name=LFV90_06530;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LFV90_06530;pseudo=true DYDR01000007.1 Protein Homology CDS 132161 133516 . + 0 ID=cds-LFV90_06530;Parent=gene-LFV90_06530;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011270538.1;locus_tag=LFV90_06530;product=MFS transporter;pseudo=true;transl_table=11 DYDR01000007.1 tpg pseudogene 133476 133835 . - . ID=gene-LFV90_06535;Name=LFV90_06535;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LFV90_06535;pseudo=true DYDR01000007.1 Protein Homology CDS 133476 133835 . - 0 ID=cds-LFV90_06535;Parent=gene-LFV90_06535;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011270783.1;locus_tag=LFV90_06535;product=HD domain-containing protein;pseudo=true;transl_table=11 DYDR01000007.1 tpg gene 133877 133968 . - . ID=gene-LFV90_06540;Name=LFV90_06540;gbkey=Gene;gene_biotype=tRNA;locus_tag=LFV90_06540 DYDR01000007.1 tRNAscan-SE tRNA 133877 133968 . - . ID=rna-LFV90_06540;Parent=gene-LFV90_06540;anticodon=(pos:complement(133932..133934));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=LFV90_06540;product=tRNA-Ser DYDR01000007.1 tRNAscan-SE exon 133877 133968 . - . ID=exon-LFV90_06540-1;Parent=rna-LFV90_06540;anticodon=(pos:complement(133932..133934));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=LFV90_06540;product=tRNA-Ser DYDR01000007.1 tpg gene 134219 134563 . - . ID=gene-LFV90_06545;Name=LFV90_06545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_06545 DYDR01000007.1 GeneMarkS-2+ CDS 134219 134563 . - 0 ID=cds-HJD61764.1;Parent=gene-LFV90_06545;Dbxref=NCBI_GP:HJD61764.1;Name=HJD61764.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_06545;product=hypothetical protein;protein_id=HJD61764.1;transl_table=11 DYDR01000007.1 tpg gene 134570 134899 . - . ID=gene-LFV90_06550;Name=LFV90_06550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_06550 DYDR01000007.1 GeneMarkS-2+ CDS 134570 134899 . - 0 ID=cds-HJD61765.1;Parent=gene-LFV90_06550;Dbxref=NCBI_GP:HJD61765.1;Name=HJD61765.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_06550;product=hypothetical protein;protein_id=HJD61765.1;transl_table=11 DYDR01000007.1 tpg gene 135185 136123 . - . ID=gene-LFV90_06555;Name=fabD;gbkey=Gene;gene=fabD;gene_biotype=protein_coding;locus_tag=LFV90_06555 DYDR01000007.1 Protein Homology CDS 135185 136123 . - 0 ID=cds-HJD61766.1;Parent=gene-LFV90_06555;Dbxref=NCBI_GP:HJD61766.1;Name=HJD61766.1;gbkey=CDS;gene=fabD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477340.1;locus_tag=LFV90_06555;product=ACP S-malonyltransferase;protein_id=HJD61766.1;transl_table=11 DYDR01000007.1 tpg gene 136445 136966 . + . ID=gene-LFV90_06560;Name=LFV90_06560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_06560 DYDR01000007.1 GeneMarkS-2+ CDS 136445 136966 . + 0 ID=cds-HJD61767.1;Parent=gene-LFV90_06560;Dbxref=NCBI_GP:HJD61767.1;Name=HJD61767.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_06560;product=hypothetical protein;protein_id=HJD61767.1;transl_table=11 DYDR01000007.1 tpg gene 137294 138148 . - . ID=gene-LFV90_06565;Name=LFV90_06565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_06565 DYDR01000007.1 Protein Homology CDS 137294 138148 . - 0 ID=cds-HJD61768.1;Parent=gene-LFV90_06565;Dbxref=NCBI_GP:HJD61768.1;Name=HJD61768.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477344.1;locus_tag=LFV90_06565;product=YihY/virulence factor BrkB family protein;protein_id=HJD61768.1;transl_table=11 DYDR01000007.1 tpg gene 138545 138946 . + . ID=gene-LFV90_06570;Name=LFV90_06570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_06570 DYDR01000007.1 Protein Homology CDS 138545 138946 . + 0 ID=cds-HJD61769.1;Parent=gene-LFV90_06570;Dbxref=NCBI_GP:HJD61769.1;Name=HJD61769.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012149631.1;locus_tag=LFV90_06570;product=helix-turn-helix domain-containing protein;protein_id=HJD61769.1;transl_table=11 DYDR01000007.1 tpg gene 139113 139189 . + . ID=gene-LFV90_06575;Name=LFV90_06575;gbkey=Gene;gene_biotype=tRNA;locus_tag=LFV90_06575 DYDR01000007.1 tRNAscan-SE tRNA 139113 139189 . + . ID=rna-LFV90_06575;Parent=gene-LFV90_06575;anticodon=(pos:139147..139149);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=LFV90_06575;product=tRNA-Arg DYDR01000007.1 tRNAscan-SE exon 139113 139189 . + . ID=exon-LFV90_06575-1;Parent=rna-LFV90_06575;anticodon=(pos:139147..139149);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=LFV90_06575;product=tRNA-Arg DYDR01000007.1 tpg gene 139352 139426 . - . ID=gene-LFV90_06580;Name=LFV90_06580;gbkey=Gene;gene_biotype=tRNA;locus_tag=LFV90_06580 DYDR01000007.1 tRNAscan-SE tRNA 139352 139426 . - . ID=rna-LFV90_06580;Parent=gene-LFV90_06580;anticodon=(pos:complement(139392..139394));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=LFV90_06580;product=tRNA-Gln DYDR01000007.1 tRNAscan-SE exon 139352 139426 . - . ID=exon-LFV90_06580-1;Parent=rna-LFV90_06580;anticodon=(pos:complement(139392..139394));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=LFV90_06580;product=tRNA-Gln DYDR01000007.1 tpg gene 139609 141453 . - . ID=gene-LFV90_06585;Name=LFV90_06585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_06585 DYDR01000007.1 Protein Homology CDS 139609 141453 . - 0 ID=cds-HJD61770.1;Parent=gene-LFV90_06585;Dbxref=NCBI_GP:HJD61770.1;Name=HJD61770.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477579.1;locus_tag=LFV90_06585;product=aminopeptidase P family protein;protein_id=HJD61770.1;transl_table=11 DYDR01000007.1 tpg gene 141833 142165 . - . ID=gene-LFV90_06590;Name=LFV90_06590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_06590 DYDR01000007.1 Protein Homology CDS 141833 142165 . - 0 ID=cds-HJD61771.1;Parent=gene-LFV90_06590;Dbxref=NCBI_GP:HJD61771.1;Name=HJD61771.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR01414.1;locus_tag=LFV90_06590;product=autotransporter outer membrane beta-barrel domain-containing protein;protein_id=HJD61771.1;transl_table=11 DYDR01000007.1 tpg gene 142226 142711 . - . ID=gene-LFV90_06595;Name=LFV90_06595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_06595 DYDR01000007.1 GeneMarkS-2+ CDS 142226 142711 . - 0 ID=cds-HJD61772.1;Parent=gene-LFV90_06595;Dbxref=NCBI_GP:HJD61772.1;Name=HJD61772.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_06595;product=hypothetical protein;protein_id=HJD61772.1;transl_table=11 DYDR01000007.1 tpg gene 142790 142864 . - . ID=gene-LFV90_06600;Name=LFV90_06600;gbkey=Gene;gene_biotype=tRNA;locus_tag=LFV90_06600 DYDR01000007.1 tRNAscan-SE tRNA 142790 142864 . - . ID=rna-LFV90_06600;Parent=gene-LFV90_06600;anticodon=(pos:complement(142830..142832));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=LFV90_06600;product=tRNA-Asn DYDR01000007.1 tRNAscan-SE exon 142790 142864 . - . ID=exon-LFV90_06600-1;Parent=rna-LFV90_06600;anticodon=(pos:complement(142830..142832));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=LFV90_06600;product=tRNA-Asn DYDR01000007.1 tpg gene 143040 144509 . - . ID=gene-LFV90_06605;Name=LFV90_06605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_06605 DYDR01000007.1 Protein Homology CDS 143040 144509 . - 0 ID=cds-HJD61773.1;Parent=gene-LFV90_06605;Dbxref=NCBI_GP:HJD61773.1;Name=HJD61773.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477581.1;locus_tag=LFV90_06605;product=hypothetical protein;protein_id=HJD61773.1;transl_table=11 DYDR01000007.1 tpg gene 144530 145510 . - . ID=gene-LFV90_06610;Name=hemB;gbkey=Gene;gene=hemB;gene_biotype=protein_coding;locus_tag=LFV90_06610 DYDR01000007.1 Protein Homology CDS 144530 145510 . - 0 ID=cds-HJD61774.1;Parent=gene-LFV90_06610;Dbxref=NCBI_GP:HJD61774.1;Name=HJD61774.1;gbkey=CDS;gene=hemB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016917560.1;locus_tag=LFV90_06610;product=porphobilinogen synthase;protein_id=HJD61774.1;transl_table=11 DYDR01000007.1 tpg gene 146291 146944 . + . ID=gene-LFV90_06615;Name=LFV90_06615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_06615 DYDR01000007.1 GeneMarkS-2+ CDS 146291 146944 . + 0 ID=cds-HJD61775.1;Parent=gene-LFV90_06615;Dbxref=NCBI_GP:HJD61775.1;Name=HJD61775.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_06615;product=hypothetical protein;protein_id=HJD61775.1;transl_table=11 DYDR01000007.1 tpg gene 146941 148887 . - . ID=gene-LFV90_06620;Name=LFV90_06620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_06620 DYDR01000007.1 Protein Homology CDS 146941 148887 . - 0 ID=cds-HJD61776.1;Parent=gene-LFV90_06620;Dbxref=NCBI_GP:HJD61776.1;Name=HJD61776.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004597830.1;locus_tag=LFV90_06620;product=primosomal protein N';protein_id=HJD61776.1;transl_table=11 DYDR01000007.1 tpg gene 148951 149511 . + . ID=gene-LFV90_06625;Name=LFV90_06625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_06625 DYDR01000007.1 Protein Homology CDS 148951 149511 . + 0 ID=cds-HJD61777.1;Parent=gene-LFV90_06625;Dbxref=NCBI_GP:HJD61777.1;Name=HJD61777.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477588.1;locus_tag=LFV90_06625;product=UbiX family flavin prenyltransferase;protein_id=HJD61777.1;transl_table=11 DYDR01000007.1 tpg gene 149839 151335 . + . ID=gene-LFV90_06630;Name=LFV90_06630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_06630 DYDR01000007.1 Protein Homology CDS 149839 151335 . + 0 ID=cds-HJD61778.1;Parent=gene-LFV90_06630;Dbxref=NCBI_GP:HJD61778.1;Name=HJD61778.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477591.1;locus_tag=LFV90_06630;product=replicative DNA helicase;protein_id=HJD61778.1;transl_table=11 DYDR01000007.1 tpg gene 151533 151919 . - . ID=gene-LFV90_06635;Name=LFV90_06635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_06635 DYDR01000007.1 Protein Homology CDS 151533 151919 . - 0 ID=cds-HJD61779.1;Parent=gene-LFV90_06635;Dbxref=NCBI_GP:HJD61779.1;Name=HJD61779.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015197.2;locus_tag=LFV90_06635;product=hypothetical protein;protein_id=HJD61779.1;transl_table=11 DYDR01000007.1 tpg pseudogene 151948 152738 . - . ID=gene-LFV90_06640;Name=LFV90_06640;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LFV90_06640;pseudo=true DYDR01000007.1 Protein Homology CDS 151948 152738 . - 0 ID=cds-LFV90_06640;Parent=gene-LFV90_06640;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015197.2;locus_tag=LFV90_06640;product=amino acid permease;pseudo=true;transl_table=11 DYDR01000007.1 tpg gene 152970 153893 . - . ID=gene-LFV90_06645;Name=LFV90_06645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_06645 DYDR01000007.1 Protein Homology CDS 152970 153893 . - 0 ID=cds-HJD61780.1;Parent=gene-LFV90_06645;Dbxref=NCBI_GP:HJD61780.1;Name=HJD61780.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016926199.1;locus_tag=LFV90_06645;product=D-alanyl-D-alanine carboxypeptidase;protein_id=HJD61780.1;transl_table=11 DYDR01000007.1 tpg pseudogene 154125 155346 . - . ID=gene-LFV90_06650;Name=LFV90_06650;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LFV90_06650;pseudo=true DYDR01000007.1 Protein Homology CDS 154125 155346 . - 0 ID=cds-LFV90_06650;Parent=gene-LFV90_06650;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477594.1;locus_tag=LFV90_06650;product=MFS transporter;pseudo=true;transl_table=11 DYDR01000007.1 tpg gene 155449 157227 . - . ID=gene-LFV90_06655;Name=LFV90_06655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_06655 DYDR01000007.1 Protein Homology CDS 155449 157227 . - 0 ID=cds-HJD61781.1;Parent=gene-LFV90_06655;Dbxref=NCBI_GP:HJD61781.1;Name=HJD61781.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016916710.1;locus_tag=LFV90_06655;product=ABC transporter ATP-binding protein/permease;protein_id=HJD61781.1;transl_table=11 DYDR01000007.1 tpg gene 157220 158248 . - . ID=gene-LFV90_06660;Name=ruvB;gbkey=Gene;gene=ruvB;gene_biotype=protein_coding;locus_tag=LFV90_06660 DYDR01000007.1 Protein Homology CDS 157220 158248 . - 0 ID=cds-HJD61782.1;Parent=gene-LFV90_06660;Dbxref=NCBI_GP:HJD61782.1;Name=HJD61782.1;gbkey=CDS;gene=ruvB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477596.1;locus_tag=LFV90_06660;product=Holliday junction branch migration DNA helicase RuvB;protein_id=HJD61782.1;transl_table=11 DYDR01000007.1 tpg gene 158603 159400 . - . ID=gene-LFV90_06665;Name=LFV90_06665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_06665 DYDR01000007.1 GeneMarkS-2+ CDS 158603 159400 . - 0 ID=cds-HJD61783.1;Parent=gene-LFV90_06665;Dbxref=NCBI_GP:HJD61783.1;Name=HJD61783.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_06665;product=hypothetical protein;protein_id=HJD61783.1;transl_table=11 DYDR01000007.1 tpg gene 159542 160153 . - . ID=gene-LFV90_06670;Name=ruvA;gbkey=Gene;gene=ruvA;gene_biotype=protein_coding;locus_tag=LFV90_06670 DYDR01000007.1 Protein Homology CDS 159542 160153 . - 0 ID=cds-HJD61784.1;Parent=gene-LFV90_06670;Dbxref=NCBI_GP:HJD61784.1;Name=HJD61784.1;gbkey=CDS;gene=ruvA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010977169.1;locus_tag=LFV90_06670;product=Holliday junction branch migration protein RuvA;protein_id=HJD61784.1;transl_table=11 DYDR01000007.1 tpg gene 160155 160358 . - . ID=gene-LFV90_06675;Name=LFV90_06675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_06675 DYDR01000007.1 Protein Homology CDS 160155 160358 . - 0 ID=cds-HJD61785.1;Parent=gene-LFV90_06675;Dbxref=NCBI_GP:HJD61785.1;Name=HJD61785.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010423269.1;locus_tag=LFV90_06675;product=Holliday junction ATP-dependent DNA helicase RuvA;protein_id=HJD61785.1;transl_table=11 DYDR01000007.1 tpg gene 160473 161696 . + . ID=gene-LFV90_06680;Name=LFV90_06680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_06680 DYDR01000007.1 Protein Homology CDS 160473 161696 . + 0 ID=cds-HJD61786.1;Parent=gene-LFV90_06680;Dbxref=NCBI_GP:HJD61786.1;Name=HJD61786.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477602.1;locus_tag=LFV90_06680;product=MFS transporter;protein_id=HJD61786.1;transl_table=11 DYDR01000007.1 tpg gene 161956 162225 . - . ID=gene-LFV90_06685;Name=LFV90_06685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_06685 DYDR01000007.1 Protein Homology CDS 161956 162225 . - 0 ID=cds-HJD61787.1;Parent=gene-LFV90_06685;Dbxref=NCBI_GP:HJD61787.1;Name=HJD61787.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012151862.1;locus_tag=LFV90_06685;product=hypothetical protein;protein_id=HJD61787.1;transl_table=11 DYDR01000007.1 tpg gene 162290 162625 . - . ID=gene-LFV90_06690;Name=LFV90_06690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_06690 DYDR01000007.1 Protein Homology CDS 162290 162625 . - 0 ID=cds-HJD61788.1;Parent=gene-LFV90_06690;Dbxref=NCBI_GP:HJD61788.1;Name=HJD61788.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477607.1;locus_tag=LFV90_06690;product=iron-sulfur cluster assembly accessory protein;protein_id=HJD61788.1;transl_table=11 DYDR01000007.1 tpg gene 162629 163024 . - . ID=gene-LFV90_06695;Name=iscU;gbkey=Gene;gene=iscU;gene_biotype=protein_coding;locus_tag=LFV90_06695 DYDR01000007.1 Protein Homology CDS 162629 163024 . - 0 ID=cds-HJD61789.1;Parent=gene-LFV90_06695;Dbxref=NCBI_GP:HJD61789.1;Name=HJD61789.1;gbkey=CDS;gene=iscU;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004599506.1;locus_tag=LFV90_06695;product=Fe-S cluster assembly scaffold IscU;protein_id=HJD61789.1;transl_table=11 DYDR01000007.1 tpg gene 163135 164367 . - . ID=gene-LFV90_06700;Name=LFV90_06700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_06700 DYDR01000007.1 Protein Homology CDS 163135 164367 . - 0 ID=cds-HJD61790.1;Parent=gene-LFV90_06700;Dbxref=NCBI_GP:HJD61790.1;Name=HJD61790.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010977349.1;locus_tag=LFV90_06700;product=IscS subfamily cysteine desulfurase;protein_id=HJD61790.1;transl_table=11 DYDR01000007.1 tpg gene 164556 165671 . - . ID=gene-LFV90_06705;Name=LFV90_06705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_06705 DYDR01000007.1 Protein Homology CDS 164556 165671 . - 0 ID=cds-HJD61791.1;Parent=gene-LFV90_06705;Dbxref=NCBI_GP:HJD61791.1;Name=HJD61791.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012148608.1;locus_tag=LFV90_06705;product=cysteine desulfurase;protein_id=HJD61791.1;transl_table=11 DYDR01000007.1 tpg gene 165668 166087 . - . ID=gene-LFV90_06710;Name=LFV90_06710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_06710 DYDR01000007.1 Protein Homology CDS 165668 166087 . - 0 ID=cds-HJD61792.1;Parent=gene-LFV90_06710;Dbxref=NCBI_GP:HJD61792.1;Name=HJD61792.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017442813.1;locus_tag=LFV90_06710;product=Rrf2 family transcriptional regulator;protein_id=HJD61792.1;transl_table=11 DYDR01000007.1 tpg gene 166163 168571 . - . ID=gene-LFV90_06715;Name=LFV90_06715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_06715 DYDR01000007.1 Protein Homology CDS 166163 168571 . - 0 ID=cds-HJD61793.1;Parent=gene-LFV90_06715;Dbxref=NCBI_GP:HJD61793.1;Name=HJD61793.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477612.1;locus_tag=LFV90_06715;product=hypothetical protein;protein_id=HJD61793.1;transl_table=11 DYDR01000007.1 tpg gene 168721 170331 . + . ID=gene-LFV90_06720;Name=LFV90_06720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_06720 DYDR01000007.1 Protein Homology CDS 168721 170331 . + 0 ID=cds-HJD61794.1;Parent=gene-LFV90_06720;Dbxref=NCBI_GP:HJD61794.1;Name=HJD61794.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477613.1;locus_tag=LFV90_06720;product=hypothetical protein;protein_id=HJD61794.1;transl_table=11 DYDR01000007.1 tpg gene 170398 171108 . + . ID=gene-LFV90_06725;Name=LFV90_06725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_06725 DYDR01000007.1 Protein Homology CDS 170398 171108 . + 0 ID=cds-HJD61795.1;Parent=gene-LFV90_06725;Dbxref=NCBI_GP:HJD61795.1;Name=HJD61795.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477614.1;locus_tag=LFV90_06725;product=class II aldolase/adducin family protein;protein_id=HJD61795.1;transl_table=11 DYDR01000007.1 tpg pseudogene 171244 171602 . + . ID=gene-LFV90_06730;Name=LFV90_06730;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LFV90_06730;pseudo=true DYDR01000007.1 Protein Homology CDS 171244 171602 . + 0 ID=cds-LFV90_06730;Parent=gene-LFV90_06730;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024571.2;locus_tag=LFV90_06730;product=AAA family ATPase;pseudo=true;transl_table=11 DYDR01000007.1 tpg gene 171793 172122 . + . ID=gene-LFV90_06735;Name=LFV90_06735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_06735 DYDR01000007.1 Protein Homology CDS 171793 172122 . + 0 ID=cds-HJD61796.1;Parent=gene-LFV90_06735;Dbxref=NCBI_GP:HJD61796.1;Name=HJD61796.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025019.2;locus_tag=LFV90_06735;product=DUF4143 domain-containing protein;protein_id=HJD61796.1;transl_table=11 DYDR01000007.1 tpg gene 172478 173344 . + . ID=gene-LFV90_06740;Name=lpxC;gbkey=Gene;gene=lpxC;gene_biotype=protein_coding;locus_tag=LFV90_06740 DYDR01000007.1 Protein Homology CDS 172478 173344 . + 0 ID=cds-HJD61797.1;Parent=gene-LFV90_06740;Dbxref=NCBI_GP:HJD61797.1;Name=HJD61797.1;gbkey=CDS;gene=lpxC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477616.1;locus_tag=LFV90_06740;product=UDP-3-O-acyl-N-acetylglucosamine deacetylase;protein_id=HJD61797.1;transl_table=11 DYDR01000007.1 tpg gene 173331 174473 . - . ID=gene-LFV90_06745;Name=LFV90_06745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_06745 DYDR01000007.1 Protein Homology CDS 173331 174473 . - 0 ID=cds-HJD61798.1;Parent=gene-LFV90_06745;Dbxref=NCBI_GP:HJD61798.1;Name=HJD61798.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012151856.1;locus_tag=LFV90_06745;product=hypothetical protein;protein_id=HJD61798.1;transl_table=11 DYDR01000007.1 tpg gene 174545 175066 . + . ID=gene-LFV90_06750;Name=LFV90_06750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_06750 DYDR01000007.1 Protein Homology CDS 174545 175066 . + 0 ID=cds-HJD61799.1;Parent=gene-LFV90_06750;Dbxref=NCBI_GP:HJD61799.1;Name=HJD61799.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011271346.1;locus_tag=LFV90_06750;product=cytochrome c family protein;protein_id=HJD61799.1;transl_table=11 DYDR01000007.1 tpg gene 175050 175517 . + . ID=gene-LFV90_06755;Name=LFV90_06755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_06755 DYDR01000007.1 Protein Homology CDS 175050 175517 . + 0 ID=cds-HJD61800.1;Parent=gene-LFV90_06755;Dbxref=NCBI_GP:HJD61800.1;Name=HJD61800.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017443292.1;locus_tag=LFV90_06755;product=NfeD family protein;protein_id=HJD61800.1;transl_table=11 DYDR01000007.1 tpg gene 175514 176749 . - . ID=gene-LFV90_06760;Name=ftsA;gbkey=Gene;gene=ftsA;gene_biotype=protein_coding;locus_tag=LFV90_06760 DYDR01000007.1 Protein Homology CDS 175514 176749 . - 0 ID=cds-HJD61801.1;Parent=gene-LFV90_06760;Dbxref=NCBI_GP:HJD61801.1;Name=HJD61801.1;gbkey=CDS;gene=ftsA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010976990.1;locus_tag=LFV90_06760;product=cell division protein FtsA;protein_id=HJD61801.1;transl_table=11 DYDR01000007.1 tpg gene 176903 177706 . - . ID=gene-LFV90_06765;Name=LFV90_06765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_06765 DYDR01000007.1 Protein Homology CDS 176903 177706 . - 0 ID=cds-HJD61802.1;Parent=gene-LFV90_06765;Dbxref=NCBI_GP:HJD61802.1;Name=HJD61802.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011190708.1;locus_tag=LFV90_06765;product=cell division protein FtsQ/DivIB;protein_id=HJD61802.1;transl_table=11 DYDR01000007.1 tpg gene 177703 178668 . - . ID=gene-LFV90_06770;Name=LFV90_06770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_06770 DYDR01000007.1 Protein Homology CDS 177703 178668 . - 0 ID=cds-HJD61803.1;Parent=gene-LFV90_06770;Dbxref=NCBI_GP:HJD61803.1;Name=HJD61803.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010976988.1;locus_tag=LFV90_06770;product=D-alanine--D-alanine ligase;protein_id=HJD61803.1;transl_table=11 DYDR01000007.1 tpg gene 178844 179731 . - . ID=gene-LFV90_06775;Name=murB;gbkey=Gene;gene=murB;gene_biotype=protein_coding;locus_tag=LFV90_06775 DYDR01000007.1 Protein Homology CDS 178844 179731 . - 0 ID=cds-HJD61804.1;Parent=gene-LFV90_06775;Dbxref=NCBI_GP:HJD61804.1;Name=HJD61804.1;gbkey=CDS;gene=murB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012148429.1;locus_tag=LFV90_06775;product=UDP-N-acetylmuramate dehydrogenase;protein_id=HJD61804.1;transl_table=11 DYDR01000007.1 tpg gene 179728 181164 . - . ID=gene-LFV90_06780;Name=murC;gbkey=Gene;gene=murC;gene_biotype=protein_coding;locus_tag=LFV90_06780 DYDR01000007.1 Protein Homology CDS 179728 181164 . - 0 ID=cds-HJD61805.1;Parent=gene-LFV90_06780;Dbxref=NCBI_GP:HJD61805.1;Name=HJD61805.1;gbkey=CDS;gene=murC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012151851.1;locus_tag=LFV90_06780;product=UDP-N-acetylmuramate--L-alanine ligase;protein_id=HJD61805.1;transl_table=11 DYDR01000007.1 tpg gene 181363 182580 . - . ID=gene-LFV90_06785;Name=LFV90_06785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_06785 DYDR01000007.1 Protein Homology CDS 181363 182580 . - 0 ID=cds-HJD61806.1;Parent=gene-LFV90_06785;Dbxref=NCBI_GP:HJD61806.1;Name=HJD61806.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014413028.1;locus_tag=LFV90_06785;product=EAL domain-containing protein;protein_id=HJD61806.1;transl_table=11 DYDR01000007.1 tpg gene 182636 182878 . + . ID=gene-LFV90_06790;Name=LFV90_06790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_06790 DYDR01000007.1 Protein Homology CDS 182636 182878 . + 0 ID=cds-HJD61807.1;Parent=gene-LFV90_06790;Dbxref=NCBI_GP:HJD61807.1;Name=HJD61807.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010886244.1;locus_tag=LFV90_06790;product=BolA family transcriptional regulator;protein_id=HJD61807.1;transl_table=11 DYDR01000007.1 tpg gene 182880 183083 . + . ID=gene-LFV90_06795;Name=LFV90_06795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_06795 DYDR01000007.1 Protein Homology CDS 182880 183083 . + 0 ID=cds-HJD61808.1;Parent=gene-LFV90_06795;Dbxref=NCBI_GP:HJD61808.1;Name=HJD61808.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016917038.1;locus_tag=LFV90_06795;product=hypothetical protein;protein_id=HJD61808.1;transl_table=11 DYDR01000007.1 tpg gene 183128 183331 . - . ID=gene-LFV90_06800;Name=LFV90_06800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_06800 DYDR01000007.1 Protein Homology CDS 183128 183331 . - 0 ID=cds-HJD61809.1;Parent=gene-LFV90_06800;Dbxref=NCBI_GP:HJD61809.1;Name=HJD61809.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014391974.1;locus_tag=LFV90_06800;product=hypothetical protein;protein_id=HJD61809.1;transl_table=11 DYDR01000007.1 tpg pseudogene 183318 183959 . - . ID=gene-LFV90_06805;Name=LFV90_06805;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LFV90_06805;pseudo=true DYDR01000007.1 Protein Homology CDS 183318 183959 . - 0 ID=cds-LFV90_06805;Parent=gene-LFV90_06805;Note=internal stop;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024194.2;locus_tag=LFV90_06805;product=Rpn family recombination-promoting nuclease/putative transposase;pseudo=true;transl_table=11 DYDR01000007.1 tpg gene 184043 185095 . - . ID=gene-LFV90_06810;Name=LFV90_06810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_06810 DYDR01000007.1 Protein Homology CDS 184043 185095 . - 0 ID=cds-HJD61810.1;Parent=gene-LFV90_06810;Dbxref=NCBI_GP:HJD61810.1;Name=HJD61810.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012736484.1;locus_tag=LFV90_06810;product=HlyD family secretion protein;protein_id=HJD61810.1;transl_table=11 DYDR01000007.1 tpg gene 185098 185868 . - . ID=gene-LFV90_06815;Name=pssA;gbkey=Gene;gene=pssA;gene_biotype=protein_coding;locus_tag=LFV90_06815 DYDR01000007.1 Protein Homology CDS 185098 185868 . - 0 ID=cds-HJD61811.1;Parent=gene-LFV90_06815;Dbxref=NCBI_GP:HJD61811.1;Name=HJD61811.1;gbkey=CDS;gene=pssA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477629.1;locus_tag=LFV90_06815;product=CDP-diacylglycerol--serine O-phosphatidyltransferase;protein_id=HJD61811.1;transl_table=11 DYDR01000007.1 tpg gene 186010 186705 . - . ID=gene-LFV90_06820;Name=LFV90_06820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_06820 DYDR01000007.1 Protein Homology CDS 186010 186705 . - 0 ID=cds-HJD61812.1;Parent=gene-LFV90_06820;Dbxref=NCBI_GP:HJD61812.1;Name=HJD61812.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017443281.1;locus_tag=LFV90_06820;product=phosphatidylserine decarboxylase;protein_id=HJD61812.1;transl_table=11 DYDR01000007.1 tpg gene 186832 187155 . - . ID=gene-LFV90_06825;Name=LFV90_06825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_06825 DYDR01000007.1 Protein Homology CDS 186832 187155 . - 0 ID=cds-HJD61813.1;Parent=gene-LFV90_06825;Dbxref=NCBI_GP:HJD61813.1;Name=HJD61813.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477631.1;locus_tag=LFV90_06825;product=DUF2610 domain-containing protein;protein_id=HJD61813.1;transl_table=11 DYDR01000007.1 tpg gene 187235 187975 . - . ID=gene-LFV90_06830;Name=LFV90_06830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_06830 DYDR01000007.1 Protein Homology CDS 187235 187975 . - 0 ID=cds-HJD61814.1;Parent=gene-LFV90_06830;Dbxref=NCBI_GP:HJD61814.1;Name=HJD61814.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477632.1;locus_tag=LFV90_06830;product=inositol monophosphatase;protein_id=HJD61814.1;transl_table=11 DYDR01000007.1 tpg gene 188138 188704 . - . ID=gene-LFV90_06835;Name=efp;gbkey=Gene;gene=efp;gene_biotype=protein_coding;locus_tag=LFV90_06835 DYDR01000007.1 Protein Homology CDS 188138 188704 . - 0 ID=cds-HJD61815.1;Parent=gene-LFV90_06835;Dbxref=NCBI_GP:HJD61815.1;Name=HJD61815.1;gbkey=CDS;gene=efp;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477633.1;locus_tag=LFV90_06835;product=elongation factor P;protein_id=HJD61815.1;transl_table=11 DYDR01000007.1 tpg gene 188782 190155 . + . ID=gene-LFV90_06840;Name=LFV90_06840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_06840 DYDR01000007.1 Protein Homology CDS 188782 190155 . + 0 ID=cds-HJD61816.1;Parent=gene-LFV90_06840;Dbxref=NCBI_GP:HJD61816.1;Name=HJD61816.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012151848.1;locus_tag=LFV90_06840;product=PleD family two-component system response regulator;protein_id=HJD61816.1;transl_table=11 DYDR01000007.1 tpg gene 190158 190643 . + . ID=gene-LFV90_06845;Name=LFV90_06845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_06845 DYDR01000007.1 Protein Homology CDS 190158 190643 . + 0 ID=cds-HJD61817.1;Parent=gene-LFV90_06845;Dbxref=NCBI_GP:HJD61817.1;Name=HJD61817.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008580323.1;locus_tag=LFV90_06845;product=RNA pyrophosphohydrolase;protein_id=HJD61817.1;transl_table=11 DYDR01000007.1 tpg pseudogene 190798 191261 . - . ID=gene-LFV90_06850;Name=LFV90_06850;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LFV90_06850;pseudo=true DYDR01000007.1 Protein Homology CDS 190798 191261 . - 0 ID=cds-LFV90_06850;Parent=gene-LFV90_06850;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477637.1;locus_tag=LFV90_06850;product=spore coat U domain-containing protein;pseudo=true;transl_table=11 DYDR01000007.1 tpg gene 191252 191695 . - . ID=gene-LFV90_06855;Name=LFV90_06855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_06855 DYDR01000007.1 GeneMarkS-2+ CDS 191252 191695 . - 0 ID=cds-HJD61818.1;Parent=gene-LFV90_06855;Dbxref=NCBI_GP:HJD61818.1;Name=HJD61818.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_06855;product=hypothetical protein;protein_id=HJD61818.1;transl_table=11 DYDR01000007.1 tpg gene 191631 192521 . - . ID=gene-LFV90_06860;Name=LFV90_06860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_06860 DYDR01000007.1 Protein Homology CDS 191631 192521 . - 0 ID=cds-HJD61819.1;Parent=gene-LFV90_06860;Dbxref=NCBI_GP:HJD61819.1;Name=HJD61819.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012786.2;locus_tag=LFV90_06860;product=fimbria/pilus outer membrane usher protein;protein_id=HJD61819.1;transl_table=11 DYDR01000007.1 tpg gene 192539 192892 . - . ID=gene-LFV90_06865;Name=LFV90_06865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_06865 DYDR01000007.1 GeneMarkS-2+ CDS 192539 192892 . - 0 ID=cds-HJD61820.1;Parent=gene-LFV90_06865;Dbxref=NCBI_GP:HJD61820.1;Name=HJD61820.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_06865;product=hypothetical protein;protein_id=HJD61820.1;transl_table=11 DYDR01000007.1 tpg gene 192938 193591 . - . ID=gene-LFV90_06870;Name=LFV90_06870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_06870 DYDR01000007.1 GeneMarkS-2+ CDS 192938 193591 . - 0 ID=cds-HJD61821.1;Parent=gene-LFV90_06870;Dbxref=NCBI_GP:HJD61821.1;Name=HJD61821.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_06870;product=hypothetical protein;protein_id=HJD61821.1;transl_table=11 DYDR01000007.1 tpg gene 193718 194062 . - . ID=gene-LFV90_06875;Name=LFV90_06875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_06875 DYDR01000007.1 Protein Homology CDS 193718 194062 . - 0 ID=cds-HJD61822.1;Parent=gene-LFV90_06875;Dbxref=NCBI_GP:HJD61822.1;Name=HJD61822.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477639.1;locus_tag=LFV90_06875;product=fimbria/pilus periplasmic chaperone;protein_id=HJD61822.1;transl_table=11 DYDR01000007.1 tpg gene 194092 194595 . - . ID=gene-LFV90_06880;Name=LFV90_06880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_06880 DYDR01000007.1 Protein Homology CDS 194092 194595 . - 0 ID=cds-HJD61823.1;Parent=gene-LFV90_06880;Dbxref=NCBI_GP:HJD61823.1;Name=HJD61823.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477640.1;locus_tag=LFV90_06880;product=spore coat U domain-containing protein;protein_id=HJD61823.1;transl_table=11 DYDR01000007.1 tpg gene 194895 195776 . + . ID=gene-LFV90_06885;Name=LFV90_06885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_06885 DYDR01000007.1 Protein Homology CDS 194895 195776 . + 0 ID=cds-HJD61824.1;Parent=gene-LFV90_06885;Dbxref=NCBI_GP:HJD61824.1;Name=HJD61824.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011476761.1;locus_tag=LFV90_06885;product=Rpn family recombination-promoting nuclease/putative transposase;protein_id=HJD61824.1;transl_table=11 DYDR01000007.1 tpg gene 195851 196201 . + . ID=gene-LFV90_06890;Name=LFV90_06890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_06890 DYDR01000007.1 Protein Homology CDS 195851 196201 . + 0 ID=cds-HJD61825.1;Parent=gene-LFV90_06890;Dbxref=NCBI_GP:HJD61825.1;Name=HJD61825.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013970.2;locus_tag=LFV90_06890;product=type II toxin-antitoxin system VapC family toxin;protein_id=HJD61825.1;transl_table=11 DYDR01000007.1 tpg gene 196461 197459 . + . ID=gene-LFV90_06895;Name=LFV90_06895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_06895 DYDR01000007.1 Protein Homology CDS 196461 197459 . + 0 ID=cds-HJD61826.1;Parent=gene-LFV90_06895;Dbxref=NCBI_GP:HJD61826.1;Name=HJD61826.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012151843.1;locus_tag=LFV90_06895;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=HJD61826.1;transl_table=11 DYDR01000007.1 tpg gene 197629 198480 . + . ID=gene-LFV90_06900;Name=folD;gbkey=Gene;gene=folD;gene_biotype=protein_coding;locus_tag=LFV90_06900 DYDR01000007.1 Protein Homology CDS 197629 198480 . + 0 ID=cds-HJD61827.1;Parent=gene-LFV90_06900;Dbxref=NCBI_GP:HJD61827.1;Name=HJD61827.1;gbkey=CDS;gene=folD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477644.1;locus_tag=LFV90_06900;product=bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD;protein_id=HJD61827.1;transl_table=11 DYDR01000007.1 tpg gene 199015 199785 . - . ID=gene-LFV90_06905;Name=LFV90_06905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_06905 DYDR01000007.1 GeneMarkS-2+ CDS 199015 199785 . - 0 ID=cds-HJD61828.1;Parent=gene-LFV90_06905;Dbxref=NCBI_GP:HJD61828.1;Name=HJD61828.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_06905;product=ankyrin repeat domain-containing protein;protein_id=HJD61828.1;transl_table=11 DYDR01000007.1 tpg gene 200304 200561 . + . ID=gene-LFV90_06910;Name=LFV90_06910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_06910 DYDR01000007.1 GeneMarkS-2+ CDS 200304 200561 . + 0 ID=cds-HJD61829.1;Parent=gene-LFV90_06910;Dbxref=NCBI_GP:HJD61829.1;Name=HJD61829.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_06910;product=hypothetical protein;protein_id=HJD61829.1;transl_table=11 DYDR01000007.1 tpg gene 200913 200989 . - . ID=gene-LFV90_06915;Name=LFV90_06915;gbkey=Gene;gene_biotype=tRNA;locus_tag=LFV90_06915 DYDR01000007.1 tRNAscan-SE tRNA 200913 200989 . - . ID=rna-LFV90_06915;Parent=gene-LFV90_06915;anticodon=(pos:complement(200953..200955));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=LFV90_06915;product=tRNA-Ile DYDR01000007.1 tRNAscan-SE exon 200913 200989 . - . ID=exon-LFV90_06915-1;Parent=rna-LFV90_06915;anticodon=(pos:complement(200953..200955));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=LFV90_06915;product=tRNA-Ile DYDR01000007.1 tpg gene 201147 201222 . - . ID=gene-LFV90_06920;Name=LFV90_06920;gbkey=Gene;gene_biotype=tRNA;locus_tag=LFV90_06920 DYDR01000007.1 tRNAscan-SE tRNA 201147 201222 . - . ID=rna-LFV90_06920;Parent=gene-LFV90_06920;anticodon=(pos:complement(201187..201189));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=LFV90_06920;product=tRNA-Lys DYDR01000007.1 tRNAscan-SE exon 201147 201222 . - . ID=exon-LFV90_06920-1;Parent=rna-LFV90_06920;anticodon=(pos:complement(201187..201189));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=LFV90_06920;product=tRNA-Lys DYDR01000007.1 tpg gene 201478 202212 . + . ID=gene-LFV90_06925;Name=LFV90_06925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_06925 DYDR01000007.1 Protein Homology CDS 201478 202212 . + 0 ID=cds-HJD61830.1;Parent=gene-LFV90_06925;Dbxref=NCBI_GP:HJD61830.1;Name=HJD61830.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477649.1;locus_tag=LFV90_06925;product=3-deoxy-manno-octulosonate cytidylyltransferase;protein_id=HJD61830.1;transl_table=11 DYDR01000007.1 tpg pseudogene 202216 203841 . + . ID=gene-LFV90_06930;Name=LFV90_06930;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LFV90_06930;pseudo=true DYDR01000007.1 Protein Homology CDS 202216 203841 . + 0 ID=cds-LFV90_06930;Parent=gene-LFV90_06930;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477650.1;locus_tag=LFV90_06930;product=CTP synthase;pseudo=true;transl_table=11 DYDR01000007.1 tpg gene 203924 205447 . + . ID=gene-LFV90_06935;Name=tlc2;gbkey=Gene;gene=tlc2;gene_biotype=protein_coding;locus_tag=LFV90_06935 DYDR01000007.1 Protein Homology CDS 203924 205447 . + 0 ID=cds-HJD61831.1;Parent=gene-LFV90_06935;Dbxref=NCBI_GP:HJD61831.1;Name=HJD61831.1;gbkey=CDS;gene=tlc2;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004597535.1;locus_tag=LFV90_06935;product=nucleotide exchange transporter Tlc2;protein_id=HJD61831.1;transl_table=11 DYDR01000007.1 tpg gene 205478 205636 . - . ID=gene-LFV90_06940;Name=LFV90_06940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_06940 DYDR01000007.1 Protein Homology CDS 205478 205636 . - 0 ID=cds-HJD61832.1;Parent=gene-LFV90_06940;Dbxref=NCBI_GP:HJD61832.1;Name=HJD61832.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR03777.1;locus_tag=LFV90_06940;product=palindromic element RPE4 domain-containing protein;protein_id=HJD61832.1;transl_table=11 DYDR01000007.1 tpg pseudogene 206527 206589 . - . ID=gene-LFV90_06945;Name=LFV90_06945;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LFV90_06945;pseudo=true DYDR01000007.1 Protein Homology CDS 206527 206589 . - 0 ID=cds-LFV90_06945;Parent=gene-LFV90_06945;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR03775.1;locus_tag=LFV90_06945;product=palindromic element RPE3 domain-containing protein;pseudo=true;transl_table=11 DYDR01000007.1 tpg gene 206593 206976 . - . ID=gene-LFV90_06950;Name=acpS;gbkey=Gene;gene=acpS;gene_biotype=protein_coding;locus_tag=LFV90_06950 DYDR01000007.1 Protein Homology CDS 206593 206976 . - 0 ID=cds-HJD61833.1;Parent=gene-LFV90_06950;Dbxref=NCBI_GP:HJD61833.1;Name=HJD61833.1;gbkey=CDS;gene=acpS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477653.1;locus_tag=LFV90_06950;product=holo-ACP synthase;protein_id=HJD61833.1;transl_table=11 DYDR01000007.1 tpg gene 206977 207357 . - . ID=gene-LFV90_06955;Name=rpoZ;gbkey=Gene;gene=rpoZ;gene_biotype=protein_coding;locus_tag=LFV90_06955 DYDR01000007.1 Protein Homology CDS 206977 207357 . - 0 ID=cds-HJD61834.1;Parent=gene-LFV90_06955;Dbxref=NCBI_GP:HJD61834.1;Name=HJD61834.1;gbkey=CDS;gene=rpoZ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011271267.1;locus_tag=LFV90_06955;product=DNA-directed RNA polymerase subunit omega;protein_id=HJD61834.1;transl_table=11 DYDR01000007.1 tpg gene 207523 208782 . - . ID=gene-LFV90_06960;Name=murA;gbkey=Gene;gene=murA;gene_biotype=protein_coding;locus_tag=LFV90_06960 DYDR01000007.1 Protein Homology CDS 207523 208782 . - 0 ID=cds-HJD61835.1;Parent=gene-LFV90_06960;Dbxref=NCBI_GP:HJD61835.1;Name=HJD61835.1;gbkey=CDS;gene=murA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011191016.1;locus_tag=LFV90_06960;product=UDP-N-acetylglucosamine 1-carboxyvinyltransferase;protein_id=HJD61835.1;transl_table=11 DYDR01000007.1 tpg gene 208997 211423 . - . ID=gene-LFV90_06965;Name=gyrB;gbkey=Gene;gene=gyrB;gene_biotype=protein_coding;locus_tag=LFV90_06965 DYDR01000007.1 Protein Homology CDS 208997 211423 . - 0 ID=cds-HJD61836.1;Parent=gene-LFV90_06965;Dbxref=NCBI_GP:HJD61836.1;Name=HJD61836.1;gbkey=CDS;gene=gyrB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011271270.1;locus_tag=LFV90_06965;product=DNA topoisomerase (ATP-hydrolyzing) subunit B;protein_id=HJD61836.1;transl_table=11 DYDR01000007.1 tpg gene 211537 212397 . + . ID=gene-LFV90_06970;Name=LFV90_06970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_06970 DYDR01000007.1 Protein Homology CDS 211537 212397 . + 0 ID=cds-HJD61837.1;Parent=gene-LFV90_06970;Dbxref=NCBI_GP:HJD61837.1;Name=HJD61837.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012148536.1;locus_tag=LFV90_06970;product=TIGR01459 family HAD-type hydrolase;protein_id=HJD61837.1;transl_table=11 DYDR01000007.1 tpg gene 212615 212701 . + . ID=gene-LFV90_06975;Name=LFV90_06975;gbkey=Gene;gene_biotype=tRNA;locus_tag=LFV90_06975 DYDR01000007.1 tRNAscan-SE tRNA 212615 212701 . + . ID=rna-LFV90_06975;Parent=gene-LFV90_06975;anticodon=(pos:212649..212651);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=LFV90_06975;product=tRNA-Leu DYDR01000007.1 tRNAscan-SE exon 212615 212701 . + . ID=exon-LFV90_06975-1;Parent=rna-LFV90_06975;anticodon=(pos:212649..212651);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=LFV90_06975;product=tRNA-Leu ##sequence-region DYDR01000008.1 1 125112 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2866300 DYDR01000008.1 tpg region 1 125112 . + . ID=DYDR01000008.1:1..125112;Dbxref=taxon:2866300;collection-date=2001-12-01;country=Madagascar: Toliara;environmental-sample=true;gbkey=Src;isolate=Choog2;isolation-source=Insect;metagenome-source=insect metagenome;metagenomic=true;mol_type=genomic DNA;nat-host=Columbicola hoogstraali DYDR01000008.1 tpg gene 1 619 . + . ID=gene-LFV90_06980;Name=LFV90_06980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_06980;partial=true;start_range=.,1 DYDR01000008.1 Protein Homology CDS 1 619 . + 1 ID=cds-HJD61838.1;Parent=gene-LFV90_06980;Dbxref=NCBI_GP:HJD61838.1;Name=HJD61838.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012150630.1;locus_tag=LFV90_06980;partial=true;product=energy transducer TonB;protein_id=HJD61838.1;start_range=.,1;transl_table=11 DYDR01000008.1 tpg gene 770 2104 . + . ID=gene-LFV90_06985;Name=tolB;gbkey=Gene;gene=tolB;gene_biotype=protein_coding;locus_tag=LFV90_06985 DYDR01000008.1 Protein Homology CDS 770 2104 . + 0 ID=cds-HJD61839.1;Parent=gene-LFV90_06985;Dbxref=NCBI_GP:HJD61839.1;Name=HJD61839.1;gbkey=CDS;gene=tolB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011476961.1;locus_tag=LFV90_06985;product=Tol-Pal system beta propeller repeat protein TolB;protein_id=HJD61839.1;transl_table=11 DYDR01000008.1 tpg gene 2206 2619 . + . ID=gene-LFV90_06990;Name=LFV90_06990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_06990 DYDR01000008.1 Protein Homology CDS 2206 2619 . + 0 ID=cds-HJD61840.1;Parent=gene-LFV90_06990;Dbxref=NCBI_GP:HJD61840.1;Name=HJD61840.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012863.2;locus_tag=LFV90_06990;product=hypothetical protein;protein_id=HJD61840.1;transl_table=11 DYDR01000008.1 tpg gene 2779 3303 . + . ID=gene-LFV90_06995;Name=LFV90_06995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_06995 DYDR01000008.1 GeneMarkS-2+ CDS 2779 3303 . + 0 ID=cds-HJD61841.1;Parent=gene-LFV90_06995;Dbxref=NCBI_GP:HJD61841.1;Name=HJD61841.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_06995;product=hypothetical protein;protein_id=HJD61841.1;transl_table=11 DYDR01000008.1 tpg pseudogene 3318 4011 . + . ID=gene-LFV90_07000;Name=LFV90_07000;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LFV90_07000;pseudo=true DYDR01000008.1 Protein Homology CDS 3318 4011 . + 0 ID=cds-LFV90_07000;Parent=gene-LFV90_07000;Note=frameshifted;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015737.2;locus_tag=LFV90_07000;product=autotransporter outer membrane beta-barrel domain-containing protein;pseudo=true;transl_table=11 DYDR01000008.1 tpg gene 4592 4891 . - . ID=gene-LFV90_07005;Name=LFV90_07005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_07005 DYDR01000008.1 GeneMarkS-2+ CDS 4592 4891 . - 0 ID=cds-HJD61842.1;Parent=gene-LFV90_07005;Dbxref=NCBI_GP:HJD61842.1;Name=HJD61842.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_07005;product=hypothetical protein;protein_id=HJD61842.1;transl_table=11 DYDR01000008.1 tpg gene 5212 5925 . - . ID=gene-LFV90_07010;Name=LFV90_07010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_07010 DYDR01000008.1 Protein Homology CDS 5212 5925 . - 0 ID=cds-HJD61843.1;Parent=gene-LFV90_07010;Dbxref=NCBI_GP:HJD61843.1;Name=HJD61843.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018963.2;locus_tag=LFV90_07010;product=DUF1460 domain-containing protein;protein_id=HJD61843.1;transl_table=11 DYDR01000008.1 tpg gene 5952 6218 . - . ID=gene-LFV90_07015;Name=LFV90_07015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_07015 DYDR01000008.1 GeneMarkS-2+ CDS 5952 6218 . - 0 ID=cds-HJD61844.1;Parent=gene-LFV90_07015;Dbxref=NCBI_GP:HJD61844.1;Name=HJD61844.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_07015;product=hypothetical protein;protein_id=HJD61844.1;transl_table=11 DYDR01000008.1 tpg gene 6296 7180 . - . ID=gene-LFV90_07020;Name=thyX;gbkey=Gene;gene=thyX;gene_biotype=protein_coding;locus_tag=LFV90_07020 DYDR01000008.1 Protein Homology CDS 6296 7180 . - 0 ID=cds-HJD61845.1;Parent=gene-LFV90_07020;Dbxref=NCBI_GP:HJD61845.1;Name=HJD61845.1;gbkey=CDS;gene=thyX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004597389.1;locus_tag=LFV90_07020;product=FAD-dependent thymidylate synthase;protein_id=HJD61845.1;transl_table=11 DYDR01000008.1 tpg gene 7219 7356 . - . ID=gene-LFV90_07025;Name=LFV90_07025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_07025 DYDR01000008.1 Protein Homology CDS 7219 7356 . - 0 ID=cds-HJD61846.1;Parent=gene-LFV90_07025;Dbxref=NCBI_GP:HJD61846.1;Name=HJD61846.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR03777.1;locus_tag=LFV90_07025;product=hypothetical protein;protein_id=HJD61846.1;transl_table=11 DYDR01000008.1 tpg gene 7337 7414 . + . ID=gene-LFV90_07030;Name=LFV90_07030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_07030 DYDR01000008.1 Protein Homology CDS 7337 7414 . + 0 ID=cds-HJD61847.1;Parent=gene-LFV90_07030;Dbxref=NCBI_GP:HJD61847.1;Name=HJD61847.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR03777.1;locus_tag=LFV90_07030;product=hypothetical protein;protein_id=HJD61847.1;transl_table=11 DYDR01000008.1 tpg gene 7619 8308 . - . ID=gene-LFV90_07035;Name=LFV90_07035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_07035 DYDR01000008.1 Protein Homology CDS 7619 8308 . - 0 ID=cds-HJD61848.1;Parent=gene-LFV90_07035;Dbxref=NCBI_GP:HJD61848.1;Name=HJD61848.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011476969.1;locus_tag=LFV90_07035;product=M48 family metallopeptidase;protein_id=HJD61848.1;transl_table=11 DYDR01000008.1 tpg gene 8310 8933 . - . ID=gene-LFV90_07040;Name=LFV90_07040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_07040 DYDR01000008.1 Protein Homology CDS 8310 8933 . - 0 ID=cds-HJD61849.1;Parent=gene-LFV90_07040;Dbxref=NCBI_GP:HJD61849.1;Name=HJD61849.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014411673.1;locus_tag=LFV90_07040;product=M23 family metallopeptidase;protein_id=HJD61849.1;transl_table=11 DYDR01000008.1 tpg gene 9024 9458 . + . ID=gene-LFV90_07045;Name=rpiB;gbkey=Gene;gene=rpiB;gene_biotype=protein_coding;locus_tag=LFV90_07045 DYDR01000008.1 Protein Homology CDS 9024 9458 . + 0 ID=cds-HJD61850.1;Parent=gene-LFV90_07045;Dbxref=NCBI_GP:HJD61850.1;Name=HJD61850.1;gbkey=CDS;gene=rpiB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011476971.1;locus_tag=LFV90_07045;product=ribose 5-phosphate isomerase B;protein_id=HJD61850.1;transl_table=11 DYDR01000008.1 tpg gene 9930 10178 . - . ID=gene-LFV90_07050;Name=LFV90_07050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_07050 DYDR01000008.1 GeneMarkS-2+ CDS 9930 10178 . - 0 ID=cds-HJD61851.1;Parent=gene-LFV90_07050;Dbxref=NCBI_GP:HJD61851.1;Name=HJD61851.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_07050;product=hypothetical protein;protein_id=HJD61851.1;transl_table=11 DYDR01000008.1 tpg gene 10205 10513 . + . ID=gene-LFV90_07055;Name=LFV90_07055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_07055 DYDR01000008.1 Protein Homology CDS 10205 10513 . + 0 ID=cds-HJD61852.1;Parent=gene-LFV90_07055;Dbxref=NCBI_GP:HJD61852.1;Name=HJD61852.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014566.2;locus_tag=LFV90_07055;product=CPBP family intramembrane metalloprotease;protein_id=HJD61852.1;transl_table=11 DYDR01000008.1 tpg pseudogene 10612 12271 . + . ID=gene-LFV90_07060;Name=LFV90_07060;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LFV90_07060;pseudo=true DYDR01000008.1 Protein Homology CDS 10612 12271 . + 0 ID=cds-LFV90_07060;Parent=gene-LFV90_07060;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012235.2;locus_tag=LFV90_07060;product=ABC transporter ATP-binding protein/permease;pseudo=true;transl_table=11 DYDR01000008.1 tpg gene 12609 14444 . - . ID=gene-LFV90_07065;Name=typA;gbkey=Gene;gene=typA;gene_biotype=protein_coding;locus_tag=LFV90_07065 DYDR01000008.1 Protein Homology CDS 12609 14444 . - 0 ID=cds-HJD61853.1;Parent=gene-LFV90_07065;Dbxref=NCBI_GP:HJD61853.1;Name=HJD61853.1;gbkey=CDS;gene=typA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017443205.1;locus_tag=LFV90_07065;product=translational GTPase TypA;protein_id=HJD61853.1;transl_table=11 DYDR01000008.1 tpg gene 14727 14897 . + . ID=gene-LFV90_07070;Name=LFV90_07070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_07070 DYDR01000008.1 GeneMarkS-2+ CDS 14727 14897 . + 0 ID=cds-HJD61854.1;Parent=gene-LFV90_07070;Dbxref=NCBI_GP:HJD61854.1;Name=HJD61854.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_07070;product=hypothetical protein;protein_id=HJD61854.1;transl_table=11 DYDR01000008.1 tpg gene 14897 15301 . + . ID=gene-LFV90_07075;Name=LFV90_07075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_07075 DYDR01000008.1 GeneMarkS-2+ CDS 14897 15301 . + 0 ID=cds-HJD61855.1;Parent=gene-LFV90_07075;Dbxref=NCBI_GP:HJD61855.1;Name=HJD61855.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_07075;product=HAD-IA family hydrolase;protein_id=HJD61855.1;transl_table=11 DYDR01000008.1 tpg gene 15491 16045 . + . ID=gene-LFV90_07080;Name=LFV90_07080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_07080 DYDR01000008.1 Protein Homology CDS 15491 16045 . + 0 ID=cds-HJD61856.1;Parent=gene-LFV90_07080;Dbxref=NCBI_GP:HJD61856.1;Name=HJD61856.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011476980.1;locus_tag=LFV90_07080;product=OmpH family outer membrane protein;protein_id=HJD61856.1;transl_table=11 DYDR01000008.1 tpg gene 16057 17502 . + . ID=gene-LFV90_07085;Name=LFV90_07085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_07085 DYDR01000008.1 Protein Homology CDS 16057 17502 . + 0 ID=cds-HJD61857.1;Parent=gene-LFV90_07085;Dbxref=NCBI_GP:HJD61857.1;Name=HJD61857.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010886251.1;locus_tag=LFV90_07085;product=NADP-dependent isocitrate dehydrogenase;protein_id=HJD61857.1;transl_table=11 DYDR01000008.1 tpg gene 17540 17698 . - . ID=gene-LFV90_07090;Name=LFV90_07090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_07090 DYDR01000008.1 GeneMarkS-2+ CDS 17540 17698 . - 0 ID=cds-HJD61858.1;Parent=gene-LFV90_07090;Dbxref=NCBI_GP:HJD61858.1;Name=HJD61858.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_07090;product=hypothetical protein;protein_id=HJD61858.1;transl_table=11 DYDR01000008.1 tpg gene 17773 17934 . + . ID=gene-LFV90_07095;Name=LFV90_07095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_07095 DYDR01000008.1 GeneMarkS-2+ CDS 17773 17934 . + 0 ID=cds-HJD61859.1;Parent=gene-LFV90_07095;Dbxref=NCBI_GP:HJD61859.1;Name=HJD61859.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_07095;product=hypothetical protein;protein_id=HJD61859.1;transl_table=11 DYDR01000008.1 tpg gene 17931 18368 . + . ID=gene-LFV90_07100;Name=LFV90_07100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_07100 DYDR01000008.1 Protein Homology CDS 17931 18368 . + 0 ID=cds-HJD61860.1;Parent=gene-LFV90_07100;Dbxref=NCBI_GP:HJD61860.1;Name=HJD61860.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022472.2;locus_tag=LFV90_07100;product=DUF2608 domain-containing protein;protein_id=HJD61860.1;transl_table=11 DYDR01000008.1 tpg gene 18442 18801 . + . ID=gene-LFV90_07105;Name=LFV90_07105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_07105 DYDR01000008.1 Protein Homology CDS 18442 18801 . + 0 ID=cds-HJD61861.1;Parent=gene-LFV90_07105;Dbxref=NCBI_GP:HJD61861.1;Name=HJD61861.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010422187.1;locus_tag=LFV90_07105;product=hypothetical protein;protein_id=HJD61861.1;transl_table=11 DYDR01000008.1 tpg gene 18812 19537 . + . ID=gene-LFV90_07110;Name=recO;gbkey=Gene;gene=recO;gene_biotype=protein_coding;locus_tag=LFV90_07110 DYDR01000008.1 Protein Homology CDS 18812 19537 . + 0 ID=cds-HJD61862.1;Parent=gene-LFV90_07110;Dbxref=NCBI_GP:HJD61862.1;Name=HJD61862.1;gbkey=CDS;gene=recO;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011476984.1;locus_tag=LFV90_07110;product=DNA repair protein RecO;protein_id=HJD61862.1;transl_table=11 DYDR01000008.1 tpg gene 19736 20296 . - . ID=gene-LFV90_07115;Name=LFV90_07115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_07115 DYDR01000008.1 Protein Homology CDS 19736 20296 . - 0 ID=cds-HJD61863.1;Parent=gene-LFV90_07115;Dbxref=NCBI_GP:HJD61863.1;Name=HJD61863.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011476985.1;locus_tag=LFV90_07115;product=hypothetical protein;protein_id=HJD61863.1;transl_table=11 DYDR01000008.1 tpg gene 20360 21688 . - . ID=gene-LFV90_07120;Name=LFV90_07120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_07120 DYDR01000008.1 Protein Homology CDS 20360 21688 . - 0 ID=cds-HJD61864.1;Parent=gene-LFV90_07120;Dbxref=NCBI_GP:HJD61864.1;Name=HJD61864.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014607232.1;locus_tag=LFV90_07120;product=methyltransferase domain-containing protein;protein_id=HJD61864.1;transl_table=11 DYDR01000008.1 tpg gene 21700 23457 . - . ID=gene-LFV90_07125;Name=recJ;gbkey=Gene;gene=recJ;gene_biotype=protein_coding;locus_tag=LFV90_07125 DYDR01000008.1 Protein Homology CDS 21700 23457 . - 0 ID=cds-HJD61865.1;Parent=gene-LFV90_07125;Dbxref=NCBI_GP:HJD61865.1;Name=HJD61865.1;gbkey=CDS;gene=recJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011476987.1;locus_tag=LFV90_07125;product=single-stranded-DNA-specific exonuclease RecJ;protein_id=HJD61865.1;transl_table=11 DYDR01000008.1 tpg gene 23494 23835 . - . ID=gene-LFV90_07130;Name=LFV90_07130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_07130 DYDR01000008.1 Protein Homology CDS 23494 23835 . - 0 ID=cds-HJD61866.1;Parent=gene-LFV90_07130;Dbxref=NCBI_GP:HJD61866.1;Name=HJD61866.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012152129.1;locus_tag=LFV90_07130;product=hypothetical protein;protein_id=HJD61866.1;transl_table=11 DYDR01000008.1 tpg gene 23866 24618 . - . ID=gene-LFV90_07135;Name=LFV90_07135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_07135 DYDR01000008.1 Protein Homology CDS 23866 24618 . - 0 ID=cds-HJD61867.1;Parent=gene-LFV90_07135;Dbxref=NCBI_GP:HJD61867.1;Name=HJD61867.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012152128.1;locus_tag=LFV90_07135;product=hypothetical protein;protein_id=HJD61867.1;transl_table=11 DYDR01000008.1 tpg gene 24628 25701 . - . ID=gene-LFV90_07140;Name=prfA;gbkey=Gene;gene=prfA;gene_biotype=protein_coding;locus_tag=LFV90_07140 DYDR01000008.1 Protein Homology CDS 24628 25701 . - 0 ID=cds-HJD61868.1;Parent=gene-LFV90_07140;Dbxref=NCBI_GP:HJD61868.1;Name=HJD61868.1;gbkey=CDS;gene=prfA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012152127.1;locus_tag=LFV90_07140;product=peptide chain release factor 1;protein_id=HJD61868.1;transl_table=11 DYDR01000008.1 tpg gene 25833 27080 . - . ID=gene-LFV90_07145;Name=LFV90_07145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_07145 DYDR01000008.1 Protein Homology CDS 25833 27080 . - 0 ID=cds-HJD61869.1;Parent=gene-LFV90_07145;Dbxref=NCBI_GP:HJD61869.1;Name=HJD61869.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011190967.1;locus_tag=LFV90_07145;product=pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase;protein_id=HJD61869.1;transl_table=11 DYDR01000008.1 tpg gene 27213 27746 . - . ID=gene-LFV90_07150;Name=infC;gbkey=Gene;gene=infC;gene_biotype=protein_coding;locus_tag=LFV90_07150 DYDR01000008.1 Protein Homology CDS 27213 27746 . - 0 ID=cds-HJD61870.1;Parent=gene-LFV90_07150;Dbxref=NCBI_GP:HJD61870.1;Name=HJD61870.1;gbkey=CDS;gene=infC;inference=COORDINATES: protein motif:HMM:TIGR00168.2;locus_tag=LFV90_07150;product=translation initiation factor IF-3;protein_id=HJD61870.1;transl_table=11 DYDR01000008.1 tpg gene 27846 28193 . - . ID=gene-LFV90_07155;Name=LFV90_07155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_07155 DYDR01000008.1 Protein Homology CDS 27846 28193 . - 0 ID=cds-HJD61871.1;Parent=gene-LFV90_07155;Dbxref=NCBI_GP:HJD61871.1;Name=HJD61871.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011476994.1;locus_tag=LFV90_07155;product=DUF2335 domain-containing protein;protein_id=HJD61871.1;transl_table=11 DYDR01000008.1 tpg gene 28180 28350 . - . ID=gene-LFV90_07160;Name=LFV90_07160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_07160 DYDR01000008.1 Protein Homology CDS 28180 28350 . - 0 ID=cds-HJD61872.1;Parent=gene-LFV90_07160;Dbxref=NCBI_GP:HJD61872.1;Name=HJD61872.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012152124.1;locus_tag=LFV90_07160;product=hypothetical protein;protein_id=HJD61872.1;transl_table=11 DYDR01000008.1 tpg pseudogene 28350 28517 . - . ID=gene-LFV90_07165;Name=LFV90_07165;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LFV90_07165;pseudo=true DYDR01000008.1 Protein Homology CDS 28350 28517 . - 0 ID=cds-LFV90_07165;Parent=gene-LFV90_07165;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014410737.1;locus_tag=LFV90_07165;product=phage BR0599 family protein;pseudo=true;transl_table=11 DYDR01000008.1 tpg gene 28501 29208 . - . ID=gene-LFV90_07170;Name=LFV90_07170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_07170 DYDR01000008.1 Protein Homology CDS 28501 29208 . - 0 ID=cds-HJD61873.1;Parent=gene-LFV90_07170;Dbxref=NCBI_GP:HJD61873.1;Name=HJD61873.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014412711.1;locus_tag=LFV90_07170;product=head-tail adaptor protein;protein_id=HJD61873.1;transl_table=11 DYDR01000008.1 tpg gene 29220 29510 . - . ID=gene-LFV90_07175;Name=LFV90_07175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_07175 DYDR01000008.1 GeneMarkS-2+ CDS 29220 29510 . - 0 ID=cds-HJD61874.1;Parent=gene-LFV90_07175;Dbxref=NCBI_GP:HJD61874.1;Name=HJD61874.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_07175;product=hypothetical protein;protein_id=HJD61874.1;transl_table=11 DYDR01000008.1 tpg gene 29495 29740 . - . ID=gene-LFV90_07180;Name=LFV90_07180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_07180 DYDR01000008.1 Protein Homology CDS 29495 29740 . - 0 ID=cds-HJD61875.1;Parent=gene-LFV90_07180;Dbxref=NCBI_GP:HJD61875.1;Name=HJD61875.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016990.2;locus_tag=LFV90_07180;product=head-tail connector protein;protein_id=HJD61875.1;transl_table=11 DYDR01000008.1 tpg pseudogene 29847 30704 . - . ID=gene-LFV90_07185;Name=LFV90_07185;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LFV90_07185;pseudo=true DYDR01000008.1 Protein Homology CDS 29847 30704 . - 0 ID=cds-LFV90_07185;Parent=gene-LFV90_07185;Note=internal stop;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR01554.2;locus_tag=LFV90_07185;product=phage major capsid protein;pseudo=true;transl_table=11 DYDR01000008.1 tpg pseudogene 30650 31319 . - . ID=gene-LFV90_07190;Name=LFV90_07190;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LFV90_07190;pseudo=true DYDR01000008.1 Protein Homology CDS 30650 31319 . - 0 ID=cds-LFV90_07190;Parent=gene-LFV90_07190;Note=frameshifted;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016471.2;locus_tag=LFV90_07190;product=HK97 family phage prohead protease;pseudo=true;transl_table=11 DYDR01000008.1 tpg gene 31510 32022 . + . ID=gene-LFV90_07195;Name=LFV90_07195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_07195 DYDR01000008.1 Protein Homology CDS 31510 32022 . + 0 ID=cds-HJD61876.1;Parent=gene-LFV90_07195;Dbxref=NCBI_GP:HJD61876.1;Name=HJD61876.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012150777.1;locus_tag=LFV90_07195;product=DUF3576 domain-containing protein;protein_id=HJD61876.1;transl_table=11 DYDR01000008.1 tpg gene 32231 32458 . + . ID=gene-LFV90_07200;Name=LFV90_07200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_07200 DYDR01000008.1 GeneMarkS-2+ CDS 32231 32458 . + 0 ID=cds-HJD61877.1;Parent=gene-LFV90_07200;Dbxref=NCBI_GP:HJD61877.1;Name=HJD61877.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_07200;product=hypothetical protein;protein_id=HJD61877.1;transl_table=11 DYDR01000008.1 tpg gene 32518 32769 . + . ID=gene-LFV90_07205;Name=LFV90_07205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_07205 DYDR01000008.1 GeneMarkS-2+ CDS 32518 32769 . + 0 ID=cds-HJD61878.1;Parent=gene-LFV90_07205;Dbxref=NCBI_GP:HJD61878.1;Name=HJD61878.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_07205;product=hypothetical protein;protein_id=HJD61878.1;transl_table=11 DYDR01000008.1 tpg gene 32830 33000 . + . ID=gene-LFV90_07210;Name=LFV90_07210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_07210 DYDR01000008.1 GeneMarkS-2+ CDS 32830 33000 . + 0 ID=cds-HJD61879.1;Parent=gene-LFV90_07210;Dbxref=NCBI_GP:HJD61879.1;Name=HJD61879.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_07210;product=hypothetical protein;protein_id=HJD61879.1;transl_table=11 DYDR01000008.1 tpg gene 33055 34065 . + . ID=gene-LFV90_07215;Name=LFV90_07215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_07215 DYDR01000008.1 Protein Homology CDS 33055 34065 . + 0 ID=cds-HJD61880.1;Parent=gene-LFV90_07215;Dbxref=NCBI_GP:HJD61880.1;Name=HJD61880.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014442.2;locus_tag=LFV90_07215;product=SAM-dependent methyltransferase;protein_id=HJD61880.1;transl_table=11 DYDR01000008.1 tpg gene 34145 34552 . + . ID=gene-LFV90_07220;Name=LFV90_07220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_07220 DYDR01000008.1 Protein Homology CDS 34145 34552 . + 0 ID=cds-HJD61881.1;Parent=gene-LFV90_07220;Dbxref=NCBI_GP:HJD61881.1;Name=HJD61881.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013579.2;locus_tag=LFV90_07220;product=restriction endonuclease subunit S;protein_id=HJD61881.1;transl_table=11 DYDR01000008.1 tpg gene 34598 37096 . + . ID=gene-LFV90_07225;Name=leuS;gbkey=Gene;gene=leuS;gene_biotype=protein_coding;locus_tag=LFV90_07225 DYDR01000008.1 Protein Homology CDS 34598 37096 . + 0 ID=cds-HJD61882.1;Parent=gene-LFV90_07225;Dbxref=NCBI_GP:HJD61882.1;Name=HJD61882.1;gbkey=CDS;gene=leuS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477003.1;locus_tag=LFV90_07225;product=leucine--tRNA ligase;protein_id=HJD61882.1;transl_table=11 DYDR01000008.1 tpg gene 37344 38780 . + . ID=gene-LFV90_07230;Name=LFV90_07230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_07230 DYDR01000008.1 Protein Homology CDS 37344 38780 . + 0 ID=cds-HJD61883.1;Parent=gene-LFV90_07230;Dbxref=NCBI_GP:HJD61883.1;Name=HJD61883.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011190999.1;locus_tag=LFV90_07230;product=sigma-54 dependent transcriptional regulator;protein_id=HJD61883.1;transl_table=11 DYDR01000008.1 tpg gene 38761 40521 . + . ID=gene-LFV90_07235;Name=LFV90_07235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_07235 DYDR01000008.1 Protein Homology CDS 38761 40521 . + 0 ID=cds-HJD61884.1;Parent=gene-LFV90_07235;Dbxref=NCBI_GP:HJD61884.1;Name=HJD61884.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012152118.1;locus_tag=LFV90_07235;product=pentapeptide repeat-containing protein;protein_id=HJD61884.1;transl_table=11 DYDR01000008.1 tpg gene 40613 41134 . - . ID=gene-LFV90_07240;Name=LFV90_07240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_07240 DYDR01000008.1 GeneMarkS-2+ CDS 40613 41134 . - 0 ID=cds-HJD61885.1;Parent=gene-LFV90_07240;Dbxref=NCBI_GP:HJD61885.1;Name=HJD61885.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_07240;product=hypothetical protein;protein_id=HJD61885.1;transl_table=11 DYDR01000008.1 tpg gene 41521 42618 . - . ID=gene-LFV90_07245;Name=LFV90_07245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_07245 DYDR01000008.1 Protein Homology CDS 41521 42618 . - 0 ID=cds-HJD61886.1;Parent=gene-LFV90_07245;Dbxref=NCBI_GP:HJD61886.1;Name=HJD61886.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013592.2;locus_tag=LFV90_07245;product=M61 family peptidase;protein_id=HJD61886.1;transl_table=11 DYDR01000008.1 tpg gene 43066 44412 . - . ID=gene-LFV90_07250;Name=radA;gbkey=Gene;gene=radA;gene_biotype=protein_coding;locus_tag=LFV90_07250 DYDR01000008.1 Protein Homology CDS 43066 44412 . - 0 ID=cds-HJD61887.1;Parent=gene-LFV90_07250;Dbxref=NCBI_GP:HJD61887.1;Name=HJD61887.1;gbkey=CDS;gene=radA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477008.1;locus_tag=LFV90_07250;product=DNA repair protein RadA;protein_id=HJD61887.1;transl_table=11 DYDR01000008.1 tpg gene 44564 44725 . - . ID=gene-LFV90_07255;Name=LFV90_07255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_07255 DYDR01000008.1 GeneMarkS-2+ CDS 44564 44725 . - 0 ID=cds-HJD61888.1;Parent=gene-LFV90_07255;Dbxref=NCBI_GP:HJD61888.1;Name=HJD61888.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_07255;product=hypothetical protein;protein_id=HJD61888.1;transl_table=11 DYDR01000008.1 tpg gene 44752 45285 . - . ID=gene-LFV90_07260;Name=LFV90_07260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_07260 DYDR01000008.1 Protein Homology CDS 44752 45285 . - 0 ID=cds-HJD61889.1;Parent=gene-LFV90_07260;Dbxref=NCBI_GP:HJD61889.1;Name=HJD61889.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024206.2;locus_tag=LFV90_07260;product=ankyrin repeat domain-containing protein;protein_id=HJD61889.1;transl_table=11 DYDR01000008.1 tpg gene 45285 45845 . - . ID=gene-LFV90_07265;Name=LFV90_07265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_07265 DYDR01000008.1 GeneMarkS-2+ CDS 45285 45845 . - 0 ID=cds-HJD61890.1;Parent=gene-LFV90_07265;Dbxref=NCBI_GP:HJD61890.1;Name=HJD61890.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_07265;product=hypothetical protein;protein_id=HJD61890.1;transl_table=11 DYDR01000008.1 tpg gene 46735 46902 . - . ID=gene-LFV90_07270;Name=LFV90_07270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_07270 DYDR01000008.1 Protein Homology CDS 46735 46902 . - 0 ID=cds-HJD61891.1;Parent=gene-LFV90_07270;Dbxref=NCBI_GP:HJD61891.1;Name=HJD61891.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016876.2;locus_tag=LFV90_07270;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=HJD61891.1;transl_table=11 DYDR01000008.1 tpg gene 46895 47176 . - . ID=gene-LFV90_07275;Name=LFV90_07275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_07275 DYDR01000008.1 Protein Homology CDS 46895 47176 . - 0 ID=cds-HJD61892.1;Parent=gene-LFV90_07275;Dbxref=NCBI_GP:HJD61892.1;Name=HJD61892.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR02606.1;locus_tag=LFV90_07275;product=type II toxin-antitoxin system ParD family antitoxin;protein_id=HJD61892.1;transl_table=11 DYDR01000008.1 tpg gene 47240 47806 . - . ID=gene-LFV90_07280;Name=rsmD;gbkey=Gene;gene=rsmD;gene_biotype=protein_coding;locus_tag=LFV90_07280 DYDR01000008.1 Protein Homology CDS 47240 47806 . - 0 ID=cds-HJD61893.1;Parent=gene-LFV90_07280;Dbxref=NCBI_GP:HJD61893.1;Name=HJD61893.1;gbkey=CDS;gene=rsmD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477012.1;locus_tag=LFV90_07280;product=16S rRNA (guanine(966)-N(2))-methyltransferase RsmD;protein_id=HJD61893.1;transl_table=11 DYDR01000008.1 tpg gene 47800 48489 . - . ID=gene-LFV90_07285;Name=LFV90_07285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_07285 DYDR01000008.1 Protein Homology CDS 47800 48489 . - 0 ID=cds-HJD61894.1;Parent=gene-LFV90_07285;Dbxref=NCBI_GP:HJD61894.1;Name=HJD61894.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477013.1;locus_tag=LFV90_07285;product=rRNA pseudouridine synthase;protein_id=HJD61894.1;transl_table=11 DYDR01000008.1 tpg gene 48553 49233 . - . ID=gene-LFV90_07290;Name=LFV90_07290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_07290 DYDR01000008.1 Protein Homology CDS 48553 49233 . - 0 ID=cds-HJD61895.1;Parent=gene-LFV90_07290;Dbxref=NCBI_GP:HJD61895.1;Name=HJD61895.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012152113.1;locus_tag=LFV90_07290;product=septal ring lytic transglycosylase RlpA family protein;protein_id=HJD61895.1;transl_table=11 DYDR01000008.1 tpg gene 49223 49837 . - . ID=gene-LFV90_07295;Name=LFV90_07295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_07295 DYDR01000008.1 Protein Homology CDS 49223 49837 . - 0 ID=cds-HJD61896.1;Parent=gene-LFV90_07295;Dbxref=NCBI_GP:HJD61896.1;Name=HJD61896.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477015.1;locus_tag=LFV90_07295;product=BON domain-containing protein;protein_id=HJD61896.1;transl_table=11 DYDR01000008.1 tpg gene 50131 50673 . - . ID=gene-LFV90_07300;Name=LFV90_07300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_07300 DYDR01000008.1 Protein Homology CDS 50131 50673 . - 0 ID=cds-HJD61897.1;Parent=gene-LFV90_07300;Dbxref=NCBI_GP:HJD61897.1;Name=HJD61897.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010423250.1;locus_tag=LFV90_07300;product=septation protein A;protein_id=HJD61897.1;transl_table=11 DYDR01000008.1 tpg gene 50687 51544 . - . ID=gene-LFV90_07305;Name=LFV90_07305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_07305 DYDR01000008.1 Protein Homology CDS 50687 51544 . - 0 ID=cds-HJD61898.1;Parent=gene-LFV90_07305;Dbxref=NCBI_GP:HJD61898.1;Name=HJD61898.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477017.1;locus_tag=LFV90_07305;product=FTR1 family protein;protein_id=HJD61898.1;transl_table=11 DYDR01000008.1 tpg gene 51553 51939 . - . ID=gene-LFV90_07310;Name=LFV90_07310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_07310 DYDR01000008.1 Protein Homology CDS 51553 51939 . - 0 ID=cds-HJD61899.1;Parent=gene-LFV90_07310;Dbxref=NCBI_GP:HJD61899.1;Name=HJD61899.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004599447.1;locus_tag=LFV90_07310;product=cupredoxin domain-containing protein;protein_id=HJD61899.1;transl_table=11 DYDR01000008.1 tpg gene 52166 53152 . - . ID=gene-LFV90_07315;Name=LFV90_07315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_07315 DYDR01000008.1 Protein Homology CDS 52166 53152 . - 0 ID=cds-HJD61900.1;Parent=gene-LFV90_07315;Dbxref=NCBI_GP:HJD61900.1;Name=HJD61900.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477019.1;locus_tag=LFV90_07315;product=FKBP-type peptidyl-prolyl cis-trans isomerase;protein_id=HJD61900.1;transl_table=11 DYDR01000008.1 tpg gene 53508 54134 . + . ID=gene-LFV90_07320;Name=LFV90_07320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_07320 DYDR01000008.1 Protein Homology CDS 53508 54134 . + 0 ID=cds-HJD61901.1;Parent=gene-LFV90_07320;Dbxref=NCBI_GP:HJD61901.1;Name=HJD61901.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017443011.1;locus_tag=LFV90_07320;product=dioxygenase;protein_id=HJD61901.1;transl_table=11 DYDR01000008.1 tpg gene 54361 55056 . + . ID=gene-LFV90_07325;Name=LFV90_07325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_07325 DYDR01000008.1 Protein Homology CDS 54361 55056 . + 0 ID=cds-HJD61902.1;Parent=gene-LFV90_07325;Dbxref=NCBI_GP:HJD61902.1;Name=HJD61902.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014363987.1;locus_tag=LFV90_07325;product=TlpA family protein disulfide reductase;protein_id=HJD61902.1;transl_table=11 DYDR01000008.1 tpg gene 55040 55954 . + . ID=gene-LFV90_07330;Name=LFV90_07330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_07330 DYDR01000008.1 Protein Homology CDS 55040 55954 . + 0 ID=cds-HJD61903.1;Parent=gene-LFV90_07330;Dbxref=NCBI_GP:HJD61903.1;Name=HJD61903.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017443013.1;locus_tag=LFV90_07330;product=S49 family peptidase;protein_id=HJD61903.1;transl_table=11 DYDR01000008.1 tpg gene 55956 56402 . + . ID=gene-LFV90_07335;Name=dut;gbkey=Gene;gene=dut;gene_biotype=protein_coding;locus_tag=LFV90_07335 DYDR01000008.1 Protein Homology CDS 55956 56402 . + 0 ID=cds-HJD61904.1;Parent=gene-LFV90_07335;Dbxref=NCBI_GP:HJD61904.1;Name=HJD61904.1;gbkey=CDS;gene=dut;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012148808.1;locus_tag=LFV90_07335;product=dUTP diphosphatase;protein_id=HJD61904.1;transl_table=11 DYDR01000008.1 tpg gene 56421 57116 . + . ID=gene-LFV90_07340;Name=tsaB;gbkey=Gene;gene=tsaB;gene_biotype=protein_coding;locus_tag=LFV90_07340 DYDR01000008.1 Protein Homology CDS 56421 57116 . + 0 ID=cds-HJD61905.1;Parent=gene-LFV90_07340;Dbxref=NCBI_GP:HJD61905.1;Name=HJD61905.1;gbkey=CDS;gene=tsaB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477025.1;locus_tag=LFV90_07340;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB;protein_id=HJD61905.1;transl_table=11 DYDR01000008.1 tpg gene 57807 58433 . + . ID=gene-LFV90_07345;Name=LFV90_07345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_07345 DYDR01000008.1 GeneMarkS-2+ CDS 57807 58433 . + 0 ID=cds-HJD61906.1;Parent=gene-LFV90_07345;Dbxref=NCBI_GP:HJD61906.1;Name=HJD61906.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_07345;product=hypothetical protein;protein_id=HJD61906.1;transl_table=11 DYDR01000008.1 tpg gene 58509 58937 . + . ID=gene-LFV90_07350;Name=LFV90_07350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_07350 DYDR01000008.1 GeneMarkS-2+ CDS 58509 58937 . + 0 ID=cds-HJD61907.1;Parent=gene-LFV90_07350;Dbxref=NCBI_GP:HJD61907.1;Name=HJD61907.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_07350;product=hypothetical protein;protein_id=HJD61907.1;transl_table=11 DYDR01000008.1 tpg gene 59008 60438 . + . ID=gene-LFV90_07355;Name=LFV90_07355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_07355 DYDR01000008.1 Protein Homology CDS 59008 60438 . + 0 ID=cds-HJD61908.1;Parent=gene-LFV90_07355;Dbxref=NCBI_GP:HJD61908.1;Name=HJD61908.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010977250.1;locus_tag=LFV90_07355;product=NAD-dependent succinate-semialdehyde dehydrogenase;protein_id=HJD61908.1;transl_table=11 DYDR01000008.1 tpg gene 60451 60768 . + . ID=gene-LFV90_07360;Name=LFV90_07360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_07360 DYDR01000008.1 GeneMarkS-2+ CDS 60451 60768 . + 0 ID=cds-HJD61909.1;Parent=gene-LFV90_07360;Dbxref=NCBI_GP:HJD61909.1;Name=HJD61909.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_07360;product=hypothetical protein;protein_id=HJD61909.1;transl_table=11 DYDR01000008.1 tpg gene 60780 60968 . + . ID=gene-LFV90_07365;Name=LFV90_07365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_07365 DYDR01000008.1 GeneMarkS-2+ CDS 60780 60968 . + 0 ID=cds-HJD61910.1;Parent=gene-LFV90_07365;Dbxref=NCBI_GP:HJD61910.1;Name=HJD61910.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_07365;product=hypothetical protein;protein_id=HJD61910.1;transl_table=11 DYDR01000008.1 tpg gene 61168 61371 . + . ID=gene-LFV90_07370;Name=LFV90_07370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_07370 DYDR01000008.1 GeneMarkS-2+ CDS 61168 61371 . + 0 ID=cds-HJD61911.1;Parent=gene-LFV90_07370;Dbxref=NCBI_GP:HJD61911.1;Name=HJD61911.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_07370;product=hypothetical protein;protein_id=HJD61911.1;transl_table=11 DYDR01000008.1 tpg gene 61854 64607 . + . ID=gene-LFV90_07375;Name=LFV90_07375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_07375 DYDR01000008.1 Protein Homology CDS 61854 64607 . + 0 ID=cds-HJD61912.1;Parent=gene-LFV90_07375;Dbxref=NCBI_GP:HJD61912.1;Name=HJD61912.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012152098.1;locus_tag=LFV90_07375;product=alkaline phosphatase;protein_id=HJD61912.1;transl_table=11 DYDR01000008.1 tpg gene 64686 65078 . + . ID=gene-LFV90_07380;Name=LFV90_07380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_07380 DYDR01000008.1 GeneMarkS-2+ CDS 64686 65078 . + 0 ID=cds-HJD61913.1;Parent=gene-LFV90_07380;Dbxref=NCBI_GP:HJD61913.1;Name=HJD61913.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_07380;product=hypothetical protein;protein_id=HJD61913.1;transl_table=11 DYDR01000008.1 tpg gene 65185 65754 . + . ID=gene-LFV90_07385;Name=LFV90_07385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_07385 DYDR01000008.1 GeneMarkS-2+ CDS 65185 65754 . + 0 ID=cds-HJD61914.1;Parent=gene-LFV90_07385;Dbxref=NCBI_GP:HJD61914.1;Name=HJD61914.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_07385;product=hypothetical protein;protein_id=HJD61914.1;transl_table=11 DYDR01000008.1 tpg pseudogene 65770 66607 . + . ID=gene-LFV90_07390;Name=LFV90_07390;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LFV90_07390;pseudo=true DYDR01000008.1 Protein Homology CDS 65770 66607 . + 0 ID=cds-LFV90_07390;Parent=gene-LFV90_07390;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014409282.1;locus_tag=LFV90_07390;product=LD-carboxypeptidase;pseudo=true;transl_table=11 DYDR01000008.1 tpg gene 66846 67748 . + . ID=gene-LFV90_07395;Name=hemC;gbkey=Gene;gene=hemC;gene_biotype=protein_coding;locus_tag=LFV90_07395 DYDR01000008.1 Protein Homology CDS 66846 67748 . + 0 ID=cds-HJD61915.1;Parent=gene-LFV90_07395;Dbxref=NCBI_GP:HJD61915.1;Name=HJD61915.1;gbkey=CDS;gene=hemC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012149671.1;locus_tag=LFV90_07395;product=hydroxymethylbilane synthase;protein_id=HJD61915.1;transl_table=11 DYDR01000008.1 tpg gene 68039 69847 . - . ID=gene-LFV90_07400;Name=aspS;gbkey=Gene;gene=aspS;gene_biotype=protein_coding;locus_tag=LFV90_07400 DYDR01000008.1 Protein Homology CDS 68039 69847 . - 0 ID=cds-HJD61916.1;Parent=gene-LFV90_07400;Dbxref=NCBI_GP:HJD61916.1;Name=HJD61916.1;gbkey=CDS;gene=aspS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014419701.1;locus_tag=LFV90_07400;product=aspartate--tRNA ligase;protein_id=HJD61916.1;transl_table=11 DYDR01000008.1 tpg gene 70073 70861 . - . ID=gene-LFV90_07405;Name=LFV90_07405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_07405 DYDR01000008.1 Protein Homology CDS 70073 70861 . - 0 ID=cds-HJD61917.1;Parent=gene-LFV90_07405;Dbxref=NCBI_GP:HJD61917.1;Name=HJD61917.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477040.1;locus_tag=LFV90_07405;product=division plane positioning ATPase MipZ;protein_id=HJD61917.1;transl_table=11 DYDR01000008.1 tpg gene 70851 72359 . - . ID=gene-LFV90_07410;Name=LFV90_07410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_07410 DYDR01000008.1 Protein Homology CDS 70851 72359 . - 0 ID=cds-HJD61918.1;Parent=gene-LFV90_07410;Dbxref=NCBI_GP:HJD61918.1;Name=HJD61918.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477041.1;locus_tag=LFV90_07410;product=leucyl aminopeptidase;protein_id=HJD61918.1;transl_table=11 DYDR01000008.1 tpg gene 72529 73602 . + . ID=gene-LFV90_07415;Name=LFV90_07415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_07415 DYDR01000008.1 Protein Homology CDS 72529 73602 . + 0 ID=cds-HJD61919.1;Parent=gene-LFV90_07415;Dbxref=NCBI_GP:HJD61919.1;Name=HJD61919.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477042.1;locus_tag=LFV90_07415;product=hypothetical protein;protein_id=HJD61919.1;transl_table=11 DYDR01000008.1 tpg gene 74032 74766 . - . ID=gene-LFV90_07420;Name=LFV90_07420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_07420 DYDR01000008.1 Protein Homology CDS 74032 74766 . - 0 ID=cds-HJD61920.1;Parent=gene-LFV90_07420;Dbxref=NCBI_GP:HJD61920.1;Name=HJD61920.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR01414.1;locus_tag=LFV90_07420;product=autotransporter outer membrane beta-barrel domain-containing protein;protein_id=HJD61920.1;transl_table=11 DYDR01000008.1 tpg gene 74818 76149 . - . ID=gene-LFV90_07425;Name=LFV90_07425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_07425 DYDR01000008.1 GeneMarkS-2+ CDS 74818 76149 . - 0 ID=cds-HJD61921.1;Parent=gene-LFV90_07425;Dbxref=NCBI_GP:HJD61921.1;Name=HJD61921.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_07425;product=hypothetical protein;protein_id=HJD61921.1;transl_table=11 DYDR01000008.1 tpg gene 76322 76639 . - . ID=gene-LFV90_07430;Name=LFV90_07430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_07430 DYDR01000008.1 GeneMarkS-2+ CDS 76322 76639 . - 0 ID=cds-HJD61922.1;Parent=gene-LFV90_07430;Dbxref=NCBI_GP:HJD61922.1;Name=HJD61922.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_07430;product=hypothetical protein;protein_id=HJD61922.1;transl_table=11 DYDR01000008.1 tpg gene 76683 76898 . - . ID=gene-LFV90_07435;Name=LFV90_07435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_07435 DYDR01000008.1 Protein Homology CDS 76683 76898 . - 0 ID=cds-HJD61923.1;Parent=gene-LFV90_07435;Dbxref=NCBI_GP:HJD61923.1;Name=HJD61923.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012152090.1;locus_tag=LFV90_07435;product=hypothetical protein;protein_id=HJD61923.1;transl_table=11 DYDR01000008.1 tpg gene 77215 77319 . - . ID=gene-LFV90_07440;Name=LFV90_07440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_07440 DYDR01000008.1 Protein Homology CDS 77215 77319 . - 0 ID=cds-HJD61924.1;Parent=gene-LFV90_07440;Dbxref=NCBI_GP:HJD61924.1;Name=HJD61924.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR03777.1;locus_tag=LFV90_07440;product=palindromic element RPE4 domain-containing protein;protein_id=HJD61924.1;transl_table=11 DYDR01000008.1 tpg gene 77514 77768 . - . ID=gene-LFV90_07445;Name=LFV90_07445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_07445 DYDR01000008.1 Protein Homology CDS 77514 77768 . - 0 ID=cds-HJD61925.1;Parent=gene-LFV90_07445;Dbxref=NCBI_GP:HJD61925.1;Name=HJD61925.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024206.2;locus_tag=LFV90_07445;product=ankyrin repeat domain-containing protein;protein_id=HJD61925.1;transl_table=11 DYDR01000008.1 tpg gene 77865 80441 . - . ID=gene-LFV90_07450;Name=LFV90_07450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_07450 DYDR01000008.1 Protein Homology CDS 77865 80441 . - 0 ID=cds-HJD61926.1;Parent=gene-LFV90_07450;Dbxref=NCBI_GP:HJD61926.1;Name=HJD61926.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012789.2;locus_tag=LFV90_07450;product=UvrD-helicase domain-containing protein;protein_id=HJD61926.1;transl_table=11 DYDR01000008.1 tpg gene 80550 80624 . + . ID=gene-LFV90_07455;Name=LFV90_07455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_07455 DYDR01000008.1 Protein Homology CDS 80550 80624 . + 0 ID=cds-HJD61927.1;Parent=gene-LFV90_07455;Dbxref=NCBI_GP:HJD61927.1;Name=HJD61927.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR03777.1;locus_tag=LFV90_07455;product=palindromic element RPE4 domain-containing protein;protein_id=HJD61927.1;transl_table=11 DYDR01000008.1 tpg gene 80715 81392 . - . ID=gene-LFV90_07460;Name=LFV90_07460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_07460 DYDR01000008.1 Protein Homology CDS 80715 81392 . - 0 ID=cds-HJD61928.1;Parent=gene-LFV90_07460;Dbxref=NCBI_GP:HJD61928.1;Name=HJD61928.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477049.1;locus_tag=LFV90_07460;product=SURF1 family protein;protein_id=HJD61928.1;transl_table=11 DYDR01000008.1 tpg gene 81665 82357 . - . ID=gene-LFV90_07465;Name=dnaQ;gbkey=Gene;gene=dnaQ;gene_biotype=protein_coding;locus_tag=LFV90_07465 DYDR01000008.1 Protein Homology CDS 81665 82357 . - 0 ID=cds-HJD61929.1;Parent=gene-LFV90_07465;Dbxref=NCBI_GP:HJD61929.1;Name=HJD61929.1;gbkey=CDS;gene=dnaQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011191152.1;locus_tag=LFV90_07465;product=DNA polymerase III subunit epsilon;protein_id=HJD61929.1;transl_table=11 DYDR01000008.1 tpg gene 82345 82920 . - . ID=gene-LFV90_07470;Name=coaE;gbkey=Gene;gene=coaE;gene_biotype=protein_coding;locus_tag=LFV90_07470 DYDR01000008.1 Protein Homology CDS 82345 82920 . - 0 ID=cds-HJD61930.1;Parent=gene-LFV90_07470;Dbxref=NCBI_GP:HJD61930.1;Name=HJD61930.1;Note=Dephospho-CoA kinase (CoaE) performs the final step in coenzyme A biosynthesis.;gbkey=CDS;gene=coaE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011191151.1;locus_tag=LFV90_07470;product=dephospho-CoA kinase;protein_id=HJD61930.1;transl_table=11 DYDR01000008.1 tpg gene 82914 83726 . - . ID=gene-LFV90_07475;Name=LFV90_07475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_07475 DYDR01000008.1 Protein Homology CDS 82914 83726 . - 0 ID=cds-HJD61931.1;Parent=gene-LFV90_07475;Dbxref=NCBI_GP:HJD61931.1;Name=HJD61931.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016945911.1;locus_tag=LFV90_07475;product=LpxI family protein;protein_id=HJD61931.1;transl_table=11 DYDR01000008.1 tpg gene 83790 84378 . + . ID=gene-LFV90_07480;Name=ssrA;gbkey=Gene;gene=ssrA;gene_biotype=tmRNA;locus_tag=LFV90_07480 DYDR01000008.1 cmsearch tmRNA 83790 84378 . + . ID=rna-LFV90_07480;Parent=gene-LFV90_07480;Dbxref=RFAM:RF01849;Note=alphaproteobacterial-type;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LFV90_07480;product=transfer-messenger RNA DYDR01000008.1 cmsearch exon 83790 84378 . + . ID=exon-LFV90_07480-1;Parent=rna-LFV90_07480;Dbxref=RFAM:RF01849;Note=alphaproteobacterial-type;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LFV90_07480;product=transfer-messenger RNA DYDR01000008.1 tpg gene 84573 85082 . + . ID=gene-LFV90_07485;Name=LFV90_07485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_07485 DYDR01000008.1 Protein Homology CDS 84573 85082 . + 0 ID=cds-HJD61932.1;Parent=gene-LFV90_07485;Dbxref=NCBI_GP:HJD61932.1;Name=HJD61932.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477055.1;locus_tag=LFV90_07485;product=ClpXP protease specificity-enhancing factor SspB;protein_id=HJD61932.1;transl_table=11 DYDR01000008.1 tpg gene 85087 85554 . + . ID=gene-LFV90_07490;Name=rnhA;gbkey=Gene;gene=rnhA;gene_biotype=protein_coding;locus_tag=LFV90_07490 DYDR01000008.1 Protein Homology CDS 85087 85554 . + 0 ID=cds-HJD61933.1;Parent=gene-LFV90_07490;Dbxref=NCBI_GP:HJD61933.1;Name=HJD61933.1;gbkey=CDS;gene=rnhA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477056.1;locus_tag=LFV90_07490;product=ribonuclease HI;protein_id=HJD61933.1;transl_table=11 DYDR01000008.1 tpg gene 85542 85841 . + . ID=gene-LFV90_07495;Name=LFV90_07495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_07495 DYDR01000008.1 Protein Homology CDS 85542 85841 . + 0 ID=cds-HJD61934.1;Parent=gene-LFV90_07495;Dbxref=NCBI_GP:HJD61934.1;Name=HJD61934.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017442576.1;locus_tag=LFV90_07495;product=NADH-ubiquinone oxidoreductase subunit NDUFA12 family protein;protein_id=HJD61934.1;transl_table=11 DYDR01000008.1 tpg gene 85866 86315 . + . ID=gene-LFV90_07500;Name=mlaD;gbkey=Gene;gene=mlaD;gene_biotype=protein_coding;locus_tag=LFV90_07500 DYDR01000008.1 Protein Homology CDS 85866 86315 . + 0 ID=cds-HJD61935.1;Parent=gene-LFV90_07500;Dbxref=NCBI_GP:HJD61935.1;Name=HJD61935.1;gbkey=CDS;gene=mlaD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014392711.1;locus_tag=LFV90_07500;product=outer membrane lipid asymmetry maintenance protein MlaD;protein_id=HJD61935.1;transl_table=11 DYDR01000008.1 tpg gene 86436 86687 . + . ID=gene-LFV90_07505;Name=LFV90_07505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_07505 DYDR01000008.1 GeneMarkS-2+ CDS 86436 86687 . + 0 ID=cds-HJD61936.1;Parent=gene-LFV90_07505;Dbxref=NCBI_GP:HJD61936.1;Name=HJD61936.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_07505;product=hypothetical protein;protein_id=HJD61936.1;transl_table=11 DYDR01000008.1 tpg gene 86778 87287 . + . ID=gene-LFV90_07510;Name=LFV90_07510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_07510 DYDR01000008.1 Protein Homology CDS 86778 87287 . + 0 ID=cds-HJD61937.1;Parent=gene-LFV90_07510;Dbxref=NCBI_GP:HJD61937.1;Name=HJD61937.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012372.2;locus_tag=LFV90_07510;product=DNA cytosine methyltransferase;protein_id=HJD61937.1;transl_table=11 DYDR01000008.1 tpg pseudogene 87646 87927 . + . ID=gene-LFV90_07515;Name=LFV90_07515;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LFV90_07515;pseudo=true DYDR01000008.1 Protein Homology CDS 87646 87927 . + 0 ID=cds-LFV90_07515;Parent=gene-LFV90_07515;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019291.2;locus_tag=LFV90_07515;product=Eco57I restriction-modification methylase domain-containing protein;pseudo=true;transl_table=11 DYDR01000008.1 tpg gene 88093 88524 . + . ID=gene-LFV90_07520;Name=LFV90_07520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_07520 DYDR01000008.1 GeneMarkS-2+ CDS 88093 88524 . + 0 ID=cds-HJD61938.1;Parent=gene-LFV90_07520;Dbxref=NCBI_GP:HJD61938.1;Name=HJD61938.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_07520;product=hypothetical protein;protein_id=HJD61938.1;transl_table=11 DYDR01000008.1 tpg gene 88675 88851 . + . ID=gene-LFV90_07525;Name=LFV90_07525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_07525 DYDR01000008.1 GeneMarkS-2+ CDS 88675 88851 . + 0 ID=cds-HJD61939.1;Parent=gene-LFV90_07525;Dbxref=NCBI_GP:HJD61939.1;Name=HJD61939.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_07525;product=hypothetical protein;protein_id=HJD61939.1;transl_table=11 DYDR01000008.1 tpg gene 89373 89732 . + . ID=gene-LFV90_07530;Name=LFV90_07530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_07530 DYDR01000008.1 GeneMarkS-2+ CDS 89373 89732 . + 0 ID=cds-HJD61940.1;Parent=gene-LFV90_07530;Dbxref=NCBI_GP:HJD61940.1;Name=HJD61940.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_07530;product=hypothetical protein;protein_id=HJD61940.1;transl_table=11 DYDR01000008.1 tpg gene 90034 90444 . - . ID=gene-LFV90_07535;Name=LFV90_07535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_07535 DYDR01000008.1 Protein Homology CDS 90034 90444 . - 0 ID=cds-HJD61941.1;Parent=gene-LFV90_07535;Dbxref=NCBI_GP:HJD61941.1;Name=HJD61941.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014232.2;locus_tag=LFV90_07535;product=UvrB/UvrC motif-containing protein;protein_id=HJD61941.1;transl_table=11 DYDR01000008.1 tpg gene 90549 90857 . - . ID=gene-LFV90_07540;Name=LFV90_07540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_07540 DYDR01000008.1 Protein Homology CDS 90549 90857 . - 0 ID=cds-HJD61942.1;Parent=gene-LFV90_07540;Dbxref=NCBI_GP:HJD61942.1;Name=HJD61942.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013691.2;locus_tag=LFV90_07540;product=GIY-YIG nuclease family protein;protein_id=HJD61942.1;transl_table=11 DYDR01000008.1 tpg gene 90897 91376 . + . ID=gene-LFV90_07545;Name=LFV90_07545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_07545 DYDR01000008.1 Protein Homology CDS 90897 91376 . + 0 ID=cds-HJD61943.1;Parent=gene-LFV90_07545;Dbxref=NCBI_GP:HJD61943.1;Name=HJD61943.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010423365.1;locus_tag=LFV90_07545;product=DUF4385 domain-containing protein;protein_id=HJD61943.1;transl_table=11 DYDR01000008.1 tpg gene 91488 91772 . + . ID=gene-LFV90_07550;Name=LFV90_07550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_07550 DYDR01000008.1 Protein Homology CDS 91488 91772 . + 0 ID=cds-HJD61944.1;Parent=gene-LFV90_07550;Dbxref=NCBI_GP:HJD61944.1;Name=HJD61944.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477061.1;locus_tag=LFV90_07550;product=hypothetical protein;protein_id=HJD61944.1;transl_table=11 DYDR01000008.1 tpg gene 91781 92236 . + . ID=gene-LFV90_07555;Name=LFV90_07555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_07555 DYDR01000008.1 Protein Homology CDS 91781 92236 . + 0 ID=cds-HJD61945.1;Parent=gene-LFV90_07555;Dbxref=NCBI_GP:HJD61945.1;Name=HJD61945.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012152081.1;locus_tag=LFV90_07555;product=hypothetical protein;protein_id=HJD61945.1;transl_table=11 DYDR01000008.1 tpg gene 92287 92754 . - . ID=gene-LFV90_07560;Name=LFV90_07560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_07560 DYDR01000008.1 GeneMarkS-2+ CDS 92287 92754 . - 0 ID=cds-HJD61946.1;Parent=gene-LFV90_07560;Dbxref=NCBI_GP:HJD61946.1;Name=HJD61946.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_07560;product=hypothetical protein;protein_id=HJD61946.1;transl_table=11 DYDR01000008.1 tpg gene 92862 93221 . - . ID=gene-LFV90_07565;Name=LFV90_07565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_07565 DYDR01000008.1 GeneMarkS-2+ CDS 92862 93221 . - 0 ID=cds-HJD61947.1;Parent=gene-LFV90_07565;Dbxref=NCBI_GP:HJD61947.1;Name=HJD61947.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_07565;product=hypothetical protein;protein_id=HJD61947.1;transl_table=11 DYDR01000008.1 tpg gene 93975 96733 . + . ID=gene-LFV90_07570;Name=LFV90_07570;gbkey=Gene;gene_biotype=rRNA;locus_tag=LFV90_07570 DYDR01000008.1 cmsearch rRNA 93975 96733 . + . ID=rna-LFV90_07570;Parent=gene-LFV90_07570;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LFV90_07570;product=23S ribosomal RNA DYDR01000008.1 cmsearch exon 93975 96733 . + . ID=exon-LFV90_07570-1;Parent=rna-LFV90_07570;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LFV90_07570;product=23S ribosomal RNA DYDR01000008.1 tpg gene 97030 97144 . + . ID=gene-LFV90_07575;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=LFV90_07575 DYDR01000008.1 cmsearch rRNA 97030 97144 . + . ID=rna-LFV90_07575;Parent=gene-LFV90_07575;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LFV90_07575;product=5S ribosomal RNA DYDR01000008.1 cmsearch exon 97030 97144 . + . ID=exon-LFV90_07575-1;Parent=rna-LFV90_07575;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LFV90_07575;product=5S ribosomal RNA DYDR01000008.1 tpg gene 97940 98179 . - . ID=gene-LFV90_07580;Name=LFV90_07580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_07580 DYDR01000008.1 GeneMarkS-2+ CDS 97940 98179 . - 0 ID=cds-HJD61948.1;Parent=gene-LFV90_07580;Dbxref=NCBI_GP:HJD61948.1;Name=HJD61948.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_07580;product=hypothetical protein;protein_id=HJD61948.1;transl_table=11 DYDR01000008.1 tpg gene 98245 98562 . + . ID=gene-LFV90_07585;Name=LFV90_07585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_07585 DYDR01000008.1 GeneMarkS-2+ CDS 98245 98562 . + 0 ID=cds-HJD61949.1;Parent=gene-LFV90_07585;Dbxref=NCBI_GP:HJD61949.1;Name=HJD61949.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_07585;product=hypothetical protein;protein_id=HJD61949.1;transl_table=11 DYDR01000008.1 tpg gene 98592 99056 . + . ID=gene-LFV90_07590;Name=LFV90_07590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_07590 DYDR01000008.1 Protein Homology CDS 98592 99056 . + 0 ID=cds-HJD61950.1;Parent=gene-LFV90_07590;Dbxref=NCBI_GP:HJD61950.1;Name=HJD61950.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013775.2;locus_tag=LFV90_07590;product=phosphotransferase;protein_id=HJD61950.1;transl_table=11 DYDR01000008.1 tpg gene 99640 99924 . + . ID=gene-LFV90_07595;Name=LFV90_07595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_07595 DYDR01000008.1 GeneMarkS-2+ CDS 99640 99924 . + 0 ID=cds-HJD61951.1;Parent=gene-LFV90_07595;Dbxref=NCBI_GP:HJD61951.1;Name=HJD61951.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_07595;product=hypothetical protein;protein_id=HJD61951.1;transl_table=11 DYDR01000008.1 tpg gene 100071 100496 . + . ID=gene-LFV90_07600;Name=LFV90_07600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_07600 DYDR01000008.1 Protein Homology CDS 100071 100496 . + 0 ID=cds-HJD61952.1;Parent=gene-LFV90_07600;Dbxref=NCBI_GP:HJD61952.1;Name=HJD61952.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012422.2;locus_tag=LFV90_07600;product=helix-turn-helix transcriptional regulator;protein_id=HJD61952.1;transl_table=11 DYDR01000008.1 tpg gene 100562 100927 . + . ID=gene-LFV90_07605;Name=LFV90_07605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_07605 DYDR01000008.1 GeneMarkS-2+ CDS 100562 100927 . + 0 ID=cds-HJD61953.1;Parent=gene-LFV90_07605;Dbxref=NCBI_GP:HJD61953.1;Name=HJD61953.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_07605;product=ABC transporter ATP-binding protein;protein_id=HJD61953.1;transl_table=11 DYDR01000008.1 tpg gene 101016 102320 . + . ID=gene-LFV90_07610;Name=LFV90_07610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_07610 DYDR01000008.1 Protein Homology CDS 101016 102320 . + 0 ID=cds-HJD61954.1;Parent=gene-LFV90_07610;Dbxref=NCBI_GP:HJD61954.1;Name=HJD61954.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012235.2;locus_tag=LFV90_07610;product=ABC transporter ATP-binding protein/permease;protein_id=HJD61954.1;transl_table=11 DYDR01000008.1 tpg gene 102375 103244 . - . ID=gene-LFV90_07615;Name=LFV90_07615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_07615 DYDR01000008.1 Protein Homology CDS 102375 103244 . - 0 ID=cds-HJD61955.1;Parent=gene-LFV90_07615;Dbxref=NCBI_GP:HJD61955.1;Name=HJD61955.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012152071.1;locus_tag=LFV90_07615;product=mechanosensitive ion channel;protein_id=HJD61955.1;transl_table=11 DYDR01000008.1 tpg gene 103542 104243 . + . ID=gene-LFV90_07620;Name=LFV90_07620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_07620 DYDR01000008.1 Protein Homology CDS 103542 104243 . + 0 ID=cds-HJD61956.1;Parent=gene-LFV90_07620;Dbxref=NCBI_GP:HJD61956.1;Name=HJD61956.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477073.1;locus_tag=LFV90_07620;product=DUF4143 domain-containing protein;protein_id=HJD61956.1;transl_table=11 DYDR01000008.1 tpg gene 104671 105177 . - . ID=gene-LFV90_07625;Name=LFV90_07625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_07625 DYDR01000008.1 Protein Homology CDS 104671 105177 . - 0 ID=cds-HJD61957.1;Parent=gene-LFV90_07625;Dbxref=NCBI_GP:HJD61957.1;Name=HJD61957.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015737.2;locus_tag=LFV90_07625;product=autotransporter outer membrane beta-barrel domain-containing protein;protein_id=HJD61957.1;transl_table=11 DYDR01000008.1 tpg gene 105487 105729 . - . ID=gene-LFV90_07630;Name=LFV90_07630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_07630 DYDR01000008.1 Protein Homology CDS 105487 105729 . - 0 ID=cds-HJD61958.1;Parent=gene-LFV90_07630;Dbxref=NCBI_GP:HJD61958.1;Name=HJD61958.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477075.1;locus_tag=LFV90_07630;product=hypothetical protein;protein_id=HJD61958.1;transl_table=11 DYDR01000008.1 tpg gene 105922 106101 . + . ID=gene-LFV90_07635;Name=LFV90_07635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_07635 DYDR01000008.1 GeneMarkS-2+ CDS 105922 106101 . + 0 ID=cds-HJD61959.1;Parent=gene-LFV90_07635;Dbxref=NCBI_GP:HJD61959.1;Name=HJD61959.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_07635;product=ABC transporter ATP-binding protein;protein_id=HJD61959.1;transl_table=11 DYDR01000008.1 tpg gene 106112 106516 . + . ID=gene-LFV90_07640;Name=LFV90_07640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_07640 DYDR01000008.1 Protein Homology CDS 106112 106516 . + 0 ID=cds-HJD61960.1;Parent=gene-LFV90_07640;Dbxref=NCBI_GP:HJD61960.1;Name=HJD61960.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012149395.1;locus_tag=LFV90_07640;product=ATP-binding cassette domain-containing protein;protein_id=HJD61960.1;transl_table=11 DYDR01000008.1 tpg gene 106525 106644 . + . ID=gene-LFV90_07645;Name=LFV90_07645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_07645 DYDR01000008.1 Protein Homology CDS 106525 106644 . + 0 ID=cds-HJD61961.1;Parent=gene-LFV90_07645;Dbxref=NCBI_GP:HJD61961.1;Name=HJD61961.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024256.2;locus_tag=LFV90_07645;product=hypothetical protein;protein_id=HJD61961.1;transl_table=11 DYDR01000008.1 tpg gene 106666 107340 . + . ID=gene-LFV90_07650;Name=LFV90_07650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_07650 DYDR01000008.1 Protein Homology CDS 106666 107340 . + 0 ID=cds-HJD61962.1;Parent=gene-LFV90_07650;Dbxref=NCBI_GP:HJD61962.1;Name=HJD61962.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012235.2;locus_tag=LFV90_07650;product=ATP-binding cassette domain-containing protein;protein_id=HJD61962.1;transl_table=11 DYDR01000008.1 tpg gene 107418 110078 . + . ID=gene-LFV90_07655;Name=mutS;gbkey=Gene;gene=mutS;gene_biotype=protein_coding;locus_tag=LFV90_07655 DYDR01000008.1 Protein Homology CDS 107418 110078 . + 0 ID=cds-HJD61963.1;Parent=gene-LFV90_07655;Dbxref=NCBI_GP:HJD61963.1;Name=HJD61963.1;gbkey=CDS;gene=mutS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012152067.1;locus_tag=LFV90_07655;product=DNA mismatch repair protein MutS;protein_id=HJD61963.1;transl_table=11 DYDR01000008.1 tpg gene 110254 110328 . + . ID=gene-LFV90_07660;Name=LFV90_07660;gbkey=Gene;gene_biotype=tRNA;locus_tag=LFV90_07660 DYDR01000008.1 tRNAscan-SE tRNA 110254 110328 . + . ID=rna-LFV90_07660;Parent=gene-LFV90_07660;anticodon=(pos:110286..110288);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=LFV90_07660;product=tRNA-Gly DYDR01000008.1 tRNAscan-SE exon 110254 110328 . + . ID=exon-LFV90_07660-1;Parent=rna-LFV90_07660;anticodon=(pos:110286..110288);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=LFV90_07660;product=tRNA-Gly DYDR01000008.1 tpg gene 110358 110900 . - . ID=gene-LFV90_07665;Name=LFV90_07665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_07665 DYDR01000008.1 Protein Homology CDS 110358 110900 . - 0 ID=cds-HJD61964.1;Parent=gene-LFV90_07665;Dbxref=NCBI_GP:HJD61964.1;Name=HJD61964.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477080.1;locus_tag=LFV90_07665;product=DNA-3-methyladenine glycosylase;protein_id=HJD61964.1;transl_table=11 DYDR01000008.1 tpg gene 110893 111189 . - . ID=gene-LFV90_07670;Name=LFV90_07670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_07670 DYDR01000008.1 Protein Homology CDS 110893 111189 . - 0 ID=cds-HJD61965.1;Parent=gene-LFV90_07670;Dbxref=NCBI_GP:HJD61965.1;Name=HJD61965.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010423341.1;locus_tag=LFV90_07670;product=YciI family protein;protein_id=HJD61965.1;transl_table=11 DYDR01000008.1 tpg gene 111230 111532 . - . ID=gene-LFV90_07675;Name=LFV90_07675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_07675 DYDR01000008.1 GeneMarkS-2+ CDS 111230 111532 . - 0 ID=cds-HJD61966.1;Parent=gene-LFV90_07675;Dbxref=NCBI_GP:HJD61966.1;Name=HJD61966.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_07675;product=nucleoside triphosphate pyrophosphohydrolase;protein_id=HJD61966.1;transl_table=11 DYDR01000008.1 tpg gene 111568 111816 . - . ID=gene-LFV90_07680;Name=yidD;gbkey=Gene;gene=yidD;gene_biotype=protein_coding;locus_tag=LFV90_07680 DYDR01000008.1 Protein Homology CDS 111568 111816 . - 0 ID=cds-HJD61967.1;Parent=gene-LFV90_07680;Dbxref=NCBI_GP:HJD61967.1;Name=HJD61967.1;gbkey=CDS;gene=yidD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011270894.1;locus_tag=LFV90_07680;product=membrane protein insertion efficiency factor YidD;protein_id=HJD61967.1;transl_table=11 DYDR01000008.1 tpg gene 111809 112312 . - . ID=gene-LFV90_07685;Name=nuoE;gbkey=Gene;gene=nuoE;gene_biotype=protein_coding;locus_tag=LFV90_07685 DYDR01000008.1 Protein Homology CDS 111809 112312 . - 0 ID=cds-HJD61968.1;Parent=gene-LFV90_07685;Dbxref=NCBI_GP:HJD61968.1;Name=HJD61968.1;gbkey=CDS;gene=nuoE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477082.1;locus_tag=LFV90_07685;product=NADH-quinone oxidoreductase subunit NuoE;protein_id=HJD61968.1;transl_table=11 DYDR01000008.1 tpg gene 112480 112737 . - . ID=gene-LFV90_07690;Name=LFV90_07690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_07690 DYDR01000008.1 Protein Homology CDS 112480 112737 . - 0 ID=cds-HJD61969.1;Parent=gene-LFV90_07690;Dbxref=NCBI_GP:HJD61969.1;Name=HJD61969.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011270759.1;locus_tag=LFV90_07690;product=GIY-YIG nuclease family protein;protein_id=HJD61969.1;transl_table=11 DYDR01000008.1 tpg gene 112816 113991 . - . ID=gene-LFV90_07695;Name=nuoD;gbkey=Gene;gene=nuoD;gene_biotype=protein_coding;locus_tag=LFV90_07695 DYDR01000008.1 Protein Homology CDS 112816 113991 . - 0 ID=cds-HJD61970.1;Parent=gene-LFV90_07695;Dbxref=NCBI_GP:HJD61970.1;Name=HJD61970.1;gbkey=CDS;gene=nuoD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010886274.1;locus_tag=LFV90_07695;product=NADH dehydrogenase (quinone) subunit D;protein_id=HJD61970.1;transl_table=11 DYDR01000008.1 tpg gene 114145 114513 . + . ID=gene-LFV90_07700;Name=LFV90_07700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_07700 DYDR01000008.1 GeneMarkS-2+ CDS 114145 114513 . + 0 ID=cds-HJD61971.1;Parent=gene-LFV90_07700;Dbxref=NCBI_GP:HJD61971.1;Name=HJD61971.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_07700;product=hypothetical protein;protein_id=HJD61971.1;transl_table=11 DYDR01000008.1 tpg gene 114538 115161 . - . ID=gene-LFV90_07705;Name=LFV90_07705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_07705 DYDR01000008.1 Protein Homology CDS 114538 115161 . - 0 ID=cds-HJD61972.1;Parent=gene-LFV90_07705;Dbxref=NCBI_GP:HJD61972.1;Name=HJD61972.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017443080.1;locus_tag=LFV90_07705;product=NADH-quinone oxidoreductase subunit C;protein_id=HJD61972.1;transl_table=11 DYDR01000008.1 tpg gene 115139 115663 . - . ID=gene-LFV90_07710;Name=LFV90_07710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_07710 DYDR01000008.1 Protein Homology CDS 115139 115663 . - 0 ID=cds-HJD61973.1;Parent=gene-LFV90_07710;Dbxref=NCBI_GP:HJD61973.1;Name=HJD61973.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011270898.1;locus_tag=LFV90_07710;product=NADH-quinone oxidoreductase subunit B;protein_id=HJD61973.1;transl_table=11 DYDR01000008.1 tpg gene 115873 116244 . - . ID=gene-LFV90_07715;Name=LFV90_07715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_07715 DYDR01000008.1 Protein Homology CDS 115873 116244 . - 0 ID=cds-HJD61974.1;Parent=gene-LFV90_07715;Dbxref=NCBI_GP:HJD61974.1;Name=HJD61974.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014412885.1;locus_tag=LFV90_07715;product=NADH-quinone oxidoreductase subunit A;protein_id=HJD61974.1;transl_table=11 DYDR01000008.1 tpg gene 116376 117575 . - . ID=gene-LFV90_07720;Name=LFV90_07720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_07720 DYDR01000008.1 Protein Homology CDS 116376 117575 . - 0 ID=cds-HJD61975.1;Parent=gene-LFV90_07720;Dbxref=NCBI_GP:HJD61975.1;Name=HJD61975.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477089.1;locus_tag=LFV90_07720;product=O-antigen ligase family protein;protein_id=HJD61975.1;transl_table=11 DYDR01000008.1 tpg gene 117582 118058 . - . ID=gene-LFV90_07725;Name=LFV90_07725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_07725 DYDR01000008.1 Protein Homology CDS 117582 118058 . - 0 ID=cds-HJD61976.1;Parent=gene-LFV90_07725;Dbxref=NCBI_GP:HJD61976.1;Name=HJD61976.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004597499.1;locus_tag=LFV90_07725;product=DUF2155 domain-containing protein;protein_id=HJD61976.1;transl_table=11 DYDR01000008.1 tpg gene 118329 119150 . + . ID=gene-LFV90_07730;Name=LFV90_07730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_07730 DYDR01000008.1 GeneMarkS-2+ CDS 118329 119150 . + 0 ID=cds-HJD61977.1;Parent=gene-LFV90_07730;Dbxref=NCBI_GP:HJD61977.1;Name=HJD61977.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_07730;product=hypothetical protein;protein_id=HJD61977.1;transl_table=11 DYDR01000008.1 tpg gene 119254 119721 . + . ID=gene-LFV90_07735;Name=terL;gbkey=Gene;gene=terL;gene_biotype=protein_coding;locus_tag=LFV90_07735 DYDR01000008.1 Protein Homology CDS 119254 119721 . + 0 ID=cds-HJD61978.1;Parent=gene-LFV90_07735;Dbxref=NCBI_GP:HJD61978.1;Name=HJD61978.1;gbkey=CDS;gene=terL;inference=COORDINATES: protein motif:HMM:NF036421.2;locus_tag=LFV90_07735;product=phage terminase large subunit;protein_id=HJD61978.1;transl_table=11 DYDR01000008.1 tpg gene 119708 119854 . - . ID=gene-LFV90_07740;Name=LFV90_07740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_07740 DYDR01000008.1 Protein Homology CDS 119708 119854 . - 0 ID=cds-HJD61979.1;Parent=gene-LFV90_07740;Dbxref=NCBI_GP:HJD61979.1;Name=HJD61979.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014412574.1;locus_tag=LFV90_07740;product=hypothetical protein;protein_id=HJD61979.1;transl_table=11 DYDR01000008.1 tpg gene 119860 120654 . - . ID=gene-LFV90_07745;Name=LFV90_07745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_07745 DYDR01000008.1 GeneMarkS-2+ CDS 119860 120654 . - 0 ID=cds-HJD61980.1;Parent=gene-LFV90_07745;Dbxref=NCBI_GP:HJD61980.1;Name=HJD61980.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_07745;product=DUF3387 domain-containing protein;protein_id=HJD61980.1;transl_table=11 DYDR01000008.1 tpg gene 121133 121384 . - . ID=gene-LFV90_07750;Name=LFV90_07750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_07750 DYDR01000008.1 GeneMarkS-2+ CDS 121133 121384 . - 0 ID=cds-HJD61981.1;Parent=gene-LFV90_07750;Dbxref=NCBI_GP:HJD61981.1;Name=HJD61981.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_07750;product=hypothetical protein;protein_id=HJD61981.1;transl_table=11 DYDR01000008.1 tpg gene 121445 121537 . - . ID=gene-LFV90_07755;Name=LFV90_07755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_07755 DYDR01000008.1 Protein Homology CDS 121445 121537 . - 0 ID=cds-HJD61982.1;Parent=gene-LFV90_07755;Dbxref=NCBI_GP:HJD61982.1;Name=HJD61982.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013579.2;locus_tag=LFV90_07755;product=hypothetical protein;protein_id=HJD61982.1;transl_table=11 DYDR01000008.1 tpg gene 121534 121914 . - . ID=gene-LFV90_07760;Name=LFV90_07760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_07760 DYDR01000008.1 GeneMarkS-2+ CDS 121534 121914 . - 0 ID=cds-HJD61983.1;Parent=gene-LFV90_07760;Dbxref=NCBI_GP:HJD61983.1;Name=HJD61983.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_07760;product=hypothetical protein;protein_id=HJD61983.1;transl_table=11 DYDR01000008.1 tpg pseudogene 121911 123430 . - . ID=gene-LFV90_07765;Name=LFV90_07765;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LFV90_07765;pseudo=true DYDR01000008.1 Protein Homology CDS 121911 123430 . - 0 ID=cds-LFV90_07765;Parent=gene-LFV90_07765;Note=frameshifted;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014442.2;locus_tag=LFV90_07765;product=type I restriction-modification system subunit M;pseudo=true;transl_table=11 DYDR01000008.1 tpg gene 123614 124444 . - . ID=gene-LFV90_07770;Name=ubiA;gbkey=Gene;gene=ubiA;gene_biotype=protein_coding;locus_tag=LFV90_07770 DYDR01000008.1 Protein Homology CDS 123614 124444 . - 0 ID=cds-HJD61984.1;Parent=gene-LFV90_07770;Dbxref=NCBI_GP:HJD61984.1;Name=HJD61984.1;gbkey=CDS;gene=ubiA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012149031.1;locus_tag=LFV90_07770;product=4-hydroxybenzoate octaprenyltransferase;protein_id=HJD61984.1;transl_table=11 ##sequence-region DYDR01000009.1 1 2095 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2866300 DYDR01000009.1 tpg region 1 2095 . + . ID=DYDR01000009.1:1..2095;Dbxref=taxon:2866300;collection-date=2001-12-01;country=Madagascar: Toliara;environmental-sample=true;gbkey=Src;isolate=Choog2;isolation-source=Insect;metagenome-source=insect metagenome;metagenomic=true;mol_type=genomic DNA;nat-host=Columbicola hoogstraali DYDR01000009.1 tpg gene 1 218 . + . ID=gene-LFV90_07775;Name=LFV90_07775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_07775;partial=true;start_range=.,1 DYDR01000009.1 Protein Homology CDS 1 218 . + 2 ID=cds-HJD61985.1;Parent=gene-LFV90_07775;Dbxref=NCBI_GP:HJD61985.1;Name=HJD61985.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008581452.1;locus_tag=LFV90_07775;partial=true;product=transposase;protein_id=HJD61985.1;start_range=.,1;transl_table=11 DYDR01000009.1 tpg gene 890 1246 . + . ID=gene-LFV90_07780;Name=LFV90_07780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_07780 DYDR01000009.1 GeneMarkS-2+ CDS 890 1246 . + 0 ID=cds-HJD61986.1;Parent=gene-LFV90_07780;Dbxref=NCBI_GP:HJD61986.1;Name=HJD61986.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_07780;product=hypothetical protein;protein_id=HJD61986.1;transl_table=11 DYDR01000009.1 tpg gene 1372 1881 . - . ID=gene-LFV90_07785;Name=LFV90_07785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_07785 DYDR01000009.1 Protein Homology CDS 1372 1881 . - 0 ID=cds-HJD61987.1;Parent=gene-LFV90_07785;Dbxref=NCBI_GP:HJD61987.1;Name=HJD61987.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF033587.1;locus_tag=LFV90_07785;product=DDE-type integrase/transposase/recombinase;protein_id=HJD61987.1;transl_table=11 ##sequence-region DYDR01000010.1 1 1981 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2866300 DYDR01000010.1 tpg region 1 1981 . + . ID=DYDR01000010.1:1..1981;Dbxref=taxon:2866300;collection-date=2001-12-01;country=Madagascar: Toliara;environmental-sample=true;gbkey=Src;isolate=Choog2;isolation-source=Insect;metagenome-source=insect metagenome;metagenomic=true;mol_type=genomic DNA;nat-host=Columbicola hoogstraali DYDR01000010.1 tpg gene 152 1828 . + . ID=gene-LFV90_07790;Name=LFV90_07790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_07790 DYDR01000010.1 Protein Homology CDS 152 1828 . + 0 ID=cds-HJD61988.1;Parent=gene-LFV90_07790;Dbxref=NCBI_GP:HJD61988.1;Name=HJD61988.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015737.2;locus_tag=LFV90_07790;product=autotransporter outer membrane beta-barrel domain-containing protein;protein_id=HJD61988.1;transl_table=11 ##sequence-region DYDR01000011.1 1 1025 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2866300 DYDR01000011.1 tpg region 1 1025 . + . ID=DYDR01000011.1:1..1025;Dbxref=taxon:2866300;collection-date=2001-12-01;country=Madagascar: Toliara;environmental-sample=true;gbkey=Src;isolate=Choog2;isolation-source=Insect;metagenome-source=insect metagenome;metagenomic=true;mol_type=genomic DNA;nat-host=Columbicola hoogstraali DYDR01000011.1 tpg gene 1 237 . + . ID=gene-LFV90_07795;Name=LFV90_07795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_07795;partial=true;start_range=.,1 DYDR01000011.1 GeneMarkS-2+ CDS 1 237 . + 0 ID=cds-HJD61989.1;Parent=gene-LFV90_07795;Dbxref=NCBI_GP:HJD61989.1;Name=HJD61989.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_07795;partial=true;product=hypothetical protein;protein_id=HJD61989.1;start_range=.,1;transl_table=11 DYDR01000011.1 tpg gene 530 952 . + . ID=gene-LFV90_07800;Name=LFV90_07800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_07800 DYDR01000011.1 GeneMarkS-2+ CDS 530 952 . + 0 ID=cds-HJD61990.1;Parent=gene-LFV90_07800;Dbxref=NCBI_GP:HJD61990.1;Name=HJD61990.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LFV90_07800;product=hypothetical protein;protein_id=HJD61990.1;transl_table=11 ##sequence-region DYDR01000012.1 1 1545 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2866300 DYDR01000012.1 tpg region 1 1545 . + . ID=DYDR01000012.1:1..1545;Dbxref=taxon:2866300;collection-date=2001-12-01;country=Madagascar: Toliara;environmental-sample=true;gbkey=Src;isolate=Choog2;isolation-source=Insect;metagenome-source=insect metagenome;metagenomic=true;mol_type=genomic DNA;nat-host=Columbicola hoogstraali DYDR01000012.1 tpg gene 170 1545 . - . ID=gene-LFV90_07805;Name=LFV90_07805;end_range=1545,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=LFV90_07805;partial=true DYDR01000012.1 cmsearch rRNA 170 1545 . - . ID=rna-LFV90_07805;Parent=gene-LFV90_07805;Dbxref=RFAM:RF02541;end_range=1545,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LFV90_07805;partial=true;product=23S ribosomal RNA DYDR01000012.1 cmsearch exon 170 1545 . - . ID=exon-LFV90_07805-1;Parent=rna-LFV90_07805;Dbxref=RFAM:RF02541;end_range=1545,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LFV90_07805;partial=true;product=23S ribosomal RNA ##sequence-region DYDR01000013.1 1 2114 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2866300 DYDR01000013.1 tpg region 1 2114 . + . ID=DYDR01000013.1:1..2114;Dbxref=taxon:2866300;collection-date=2001-12-01;country=Madagascar: Toliara;environmental-sample=true;gbkey=Src;isolate=Choog2;isolation-source=Insect;metagenome-source=insect metagenome;metagenomic=true;mol_type=genomic DNA;nat-host=Columbicola hoogstraali DYDR01000013.1 tpg gene 1 96 . - . ID=gene-LFV90_07810;Name=LFV90_07810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_07810;partial=true;start_range=.,1 DYDR01000013.1 Protein Homology CDS 1 96 . - 0 ID=cds-HJD61991.1;Parent=gene-LFV90_07810;Dbxref=NCBI_GP:HJD61991.1;Name=HJD61991.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012152151.1;locus_tag=LFV90_07810;partial=true;product=nucleotidyltransferase;protein_id=HJD61991.1;start_range=.,1;transl_table=11 ##sequence-region DYDR01000014.1 1 1124 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2866300 DYDR01000014.1 tpg region 1 1124 . + . ID=DYDR01000014.1:1..1124;Dbxref=taxon:2866300;collection-date=2001-12-01;country=Madagascar: Toliara;environmental-sample=true;gbkey=Src;isolate=Choog2;isolation-source=Insect;metagenome-source=insect metagenome;metagenomic=true;mol_type=genomic DNA;nat-host=Columbicola hoogstraali DYDR01000014.1 tpg gene 374 1124 . + . ID=gene-LFV90_07815;Name=LFV90_07815;end_range=1124,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_07815;partial=true DYDR01000014.1 Protein Homology CDS 374 1124 . + 0 ID=cds-HJD61992.1;Parent=gene-LFV90_07815;Dbxref=NCBI_GP:HJD61992.1;Name=HJD61992.1;end_range=1124,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013752.2;locus_tag=LFV90_07815;partial=true;product=transposase;protein_id=HJD61992.1;transl_table=11 ##sequence-region DYDR01000015.1 1 1820 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2866300 DYDR01000015.1 tpg region 1 1820 . + . ID=DYDR01000015.1:1..1820;Dbxref=taxon:2866300;collection-date=2001-12-01;country=Madagascar: Toliara;environmental-sample=true;gbkey=Src;isolate=Choog2;isolation-source=Insect;metagenome-source=insect metagenome;metagenomic=true;mol_type=genomic DNA;nat-host=Columbicola hoogstraali DYDR01000015.1 tpg gene 139 666 . + . ID=gene-LFV90_07820;Name=LFV90_07820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_07820 DYDR01000015.1 Protein Homology CDS 139 666 . + 0 ID=cds-HJD61993.1;Parent=gene-LFV90_07820;Dbxref=NCBI_GP:HJD61993.1;Name=HJD61993.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017443566.1;locus_tag=LFV90_07820;product=Hsp20/alpha crystallin family protein;protein_id=HJD61993.1;transl_table=11 DYDR01000015.1 tpg gene 738 1202 . + . ID=gene-LFV90_07825;Name=LFV90_07825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_07825 DYDR01000015.1 Protein Homology CDS 738 1202 . + 0 ID=cds-HJD61994.1;Parent=gene-LFV90_07825;Dbxref=NCBI_GP:HJD61994.1;Name=HJD61994.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014386951.1;locus_tag=LFV90_07825;product=Hsp20/alpha crystallin family protein;protein_id=HJD61994.1;transl_table=11 DYDR01000015.1 tpg gene 1228 1797 . - . ID=gene-LFV90_07830;Name=LFV90_07830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_07830 DYDR01000015.1 Protein Homology CDS 1228 1797 . - 0 ID=cds-HJD61995.1;Parent=gene-LFV90_07830;Dbxref=NCBI_GP:HJD61995.1;Name=HJD61995.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001556711.1;locus_tag=LFV90_07830;product=recombinase family protein;protein_id=HJD61995.1;transl_table=11 ##sequence-region DYDR01000016.1 1 1130 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2866300 DYDR01000016.1 tpg region 1 1130 . + . ID=DYDR01000016.1:1..1130;Dbxref=taxon:2866300;collection-date=2001-12-01;country=Madagascar: Toliara;environmental-sample=true;gbkey=Src;isolate=Choog2;isolation-source=Insect;metagenome-source=insect metagenome;metagenomic=true;mol_type=genomic DNA;nat-host=Columbicola hoogstraali DYDR01000016.1 tpg pseudogene 62 142 . - . ID=gene-LFV90_07835;Name=LFV90_07835;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LFV90_07835;pseudo=true DYDR01000016.1 Protein Homology CDS 62 142 . - 0 ID=cds-LFV90_07835;Parent=gene-LFV90_07835;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012152151.1;locus_tag=LFV90_07835;product=nucleotidyltransferase;pseudo=true;transl_table=11 DYDR01000016.1 tpg gene 305 934 . - . ID=gene-LFV90_07840;Name=LFV90_07840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LFV90_07840 DYDR01000016.1 Protein Homology CDS 305 934 . - 0 ID=cds-HJD61996.1;Parent=gene-LFV90_07840;Dbxref=NCBI_GP:HJD61996.1;Name=HJD61996.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004997144.1;locus_tag=LFV90_07840;product=epoxyqueuosine reductase QueH;protein_id=HJD61996.1;transl_table=11 ###