##gff-version 3 #!gff-spec-version 1.21 #!processor NCBI annotwriter #!genome-build ASM73853v1 #!genome-build-accession NCBI_Assembly:GCF_000738535.1 #!annotation-date 01/03/2026 09:21:37 #!annotation-source NCBI RefSeq GCF_000738535.1-RS_2026_01_03 ##sequence-region NZ_JPQY01000001.1 1 33065 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=615 NZ_JPQY01000001.1 RefSeq region 1 33065 . + . ID=NZ_JPQY01000001.1:1..33065;Dbxref=taxon:615;collected-by=Mahloro H. Serepa%3B Vincent M. Gray;collection-date=2013-04-11;country=South Africa: North West Province;gbkey=Src;genome=genomic;identified-by=Mahloro H. Serepa%3B Vincent M. Gray;isolation-source=entomopathogenic nematode Oscheius sp. MCB living in soil;mol_type=genomic DNA;nat-host=Oscheius sp. MCB;strain=MCB NZ_JPQY01000001.1 RefSeq gene 289 468 . - . ID=gene-IY40_RS00005;Name=IY40_RS00005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS00005;old_locus_tag=IY40_00010 NZ_JPQY01000001.1 GeneMarkS-2+ CDS 289 468 . - 0 ID=cds-WP_043135380.1;Parent=gene-IY40_RS00005;Dbxref=GenBank:WP_043135380.1;Name=WP_043135380.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IY40_RS00005;product=hypothetical protein;protein_id=WP_043135380.1;transl_table=11 NZ_JPQY01000001.1 RefSeq gene 512 1018 . - . ID=gene-IY40_RS00010;Name=IY40_RS00010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS00010;old_locus_tag=IY40_00015 NZ_JPQY01000001.1 Protein Homology CDS 512 1018 . - 0 ID=cds-WP_152561282.1;Parent=gene-IY40_RS00010;Dbxref=GenBank:WP_152561282.1;Name=WP_152561282.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000108571.1;locus_tag=IY40_RS00010;product=antirestriction protein ArdA;protein_id=WP_152561282.1;transl_table=11 NZ_JPQY01000001.1 RefSeq gene 1409 2188 . - . ID=gene-IY40_RS25845;Name=IY40_RS25845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS25845 NZ_JPQY01000001.1 GeneMarkS-2+ CDS 1409 2188 . - 0 ID=cds-WP_152561280.1;Parent=gene-IY40_RS25845;Dbxref=GenBank:WP_152561280.1;Name=WP_152561280.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IY40_RS25845;product=hypothetical protein;protein_id=WP_152561280.1;transl_table=11 NZ_JPQY01000001.1 RefSeq gene 2725 3090 . + . ID=gene-IY40_RS00020;Name=IY40_RS00020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS00020;old_locus_tag=IY40_00025 NZ_JPQY01000001.1 GeneMarkS-2+ CDS 2725 3090 . + 0 ID=cds-WP_043135387.1;Parent=gene-IY40_RS00020;Dbxref=GenBank:WP_043135387.1;Name=WP_043135387.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IY40_RS00020;product=hypothetical protein;protein_id=WP_043135387.1;transl_table=11 NZ_JPQY01000001.1 RefSeq gene 3160 3501 . - . ID=gene-IY40_RS00025;Name=IY40_RS00025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS00025;old_locus_tag=IY40_00030 NZ_JPQY01000001.1 Protein Homology CDS 3160 3501 . - 0 ID=cds-WP_043135390.1;Parent=gene-IY40_RS00025;Dbxref=GenBank:WP_043135390.1;Name=WP_043135390.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000131023.1;locus_tag=IY40_RS00025;product=hypothetical protein;protein_id=WP_043135390.1;transl_table=11 NZ_JPQY01000001.1 RefSeq gene 3494 3889 . - . ID=gene-IY40_RS00030;Name=IY40_RS00030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS00030;old_locus_tag=IY40_00035 NZ_JPQY01000001.1 Protein Homology CDS 3494 3889 . - 0 ID=cds-WP_043135394.1;Parent=gene-IY40_RS00030;Dbxref=GenBank:WP_043135394.1;Name=WP_043135394.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008322837.1;locus_tag=IY40_RS00030;product=plasmid partitioning/stability family protein;protein_id=WP_043135394.1;transl_table=11 NZ_JPQY01000001.1 RefSeq gene 3895 4851 . - . ID=gene-IY40_RS00035;Name=IY40_RS00035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS00035;old_locus_tag=IY40_00040 NZ_JPQY01000001.1 Protein Homology CDS 3895 4851 . - 0 ID=cds-WP_043135399.1;Parent=gene-IY40_RS00035;Dbxref=GenBank:WP_043135399.1;Name=WP_043135399.1;Ontology_term=GO:0030541,GO:0000166;gbkey=CDS;go_function=nucleotide binding|0000166||IEA;go_process=plasmid partitioning|0030541||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004146678.1;locus_tag=IY40_RS00035;product=plasmid segregation protein ParM;protein_id=WP_043135399.1;transl_table=11 NZ_JPQY01000001.1 RefSeq gene 5197 5586 . + . ID=gene-IY40_RS00040;Name=umuD;gbkey=Gene;gene=umuD;gene_biotype=protein_coding;locus_tag=IY40_RS00040;old_locus_tag=IY40_00045 NZ_JPQY01000001.1 Protein Homology CDS 5197 5586 . + 0 ID=cds-WP_113228135.1;Parent=gene-IY40_RS00040;Dbxref=GenBank:WP_113228135.1;Name=WP_113228135.1;Ontology_term=GO:0003677;gbkey=CDS;gene=umuD;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016495512.1;locus_tag=IY40_RS00040;product=translesion error-prone DNA polymerase V autoproteolytic subunit;protein_id=WP_113228135.1;transl_table=11 NZ_JPQY01000001.1 RefSeq gene 5586 6857 . + . ID=gene-IY40_RS00045;Name=IY40_RS00045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS00045;old_locus_tag=IY40_00050 NZ_JPQY01000001.1 Protein Homology CDS 5586 6857 . + 0 ID=cds-WP_043135402.1;Parent=gene-IY40_RS00045;Dbxref=GenBank:WP_043135402.1;Name=WP_043135402.1;Ontology_term=GO:0006974,GO:0009432,GO:0019985,GO:0042276,GO:0003684,GO:0003887;gbkey=CDS;go_function=damaged DNA binding|0003684||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA damage response|0006974||IEA,SOS response|0009432||IEA,translesion synthesis|0019985||IEA,error-prone translesion synthesis|0042276||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004197744.1;locus_tag=IY40_RS00045;product=Y-family DNA polymerase;protein_id=WP_043135402.1;transl_table=11 NZ_JPQY01000001.1 RefSeq gene 7202 8068 . + . ID=gene-IY40_RS00050;Name=IY40_RS00050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS00050;old_locus_tag=IY40_00055 NZ_JPQY01000001.1 Protein Homology CDS 7202 8068 . + 0 ID=cds-WP_043135404.1;Parent=gene-IY40_RS00050;Dbxref=GenBank:WP_043135404.1;Name=WP_043135404.1;Ontology_term=GO:0006270,GO:0003677,GO:0003887;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication initiation|0006270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004118283.1;locus_tag=IY40_RS00050;product=replication initiation protein;protein_id=WP_043135404.1;transl_table=11 NZ_JPQY01000001.1 RefSeq gene 9000 9341 . - . ID=gene-IY40_RS00055;Name=IY40_RS00055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS00055;old_locus_tag=IY40_00060 NZ_JPQY01000001.1 Protein Homology CDS 9000 9341 . - 0 ID=cds-WP_043135407.1;Parent=gene-IY40_RS00055;Dbxref=GenBank:WP_043135407.1;Name=WP_043135407.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012908944.1;locus_tag=IY40_RS00055;product=hypothetical protein;protein_id=WP_043135407.1;transl_table=11 NZ_JPQY01000001.1 RefSeq gene 9433 10074 . - . ID=gene-IY40_RS00060;Name=IY40_RS00060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS00060;old_locus_tag=IY40_00065 NZ_JPQY01000001.1 Protein Homology CDS 9433 10074 . - 0 ID=cds-WP_043135409.1;Parent=gene-IY40_RS00060;Dbxref=GenBank:WP_043135409.1;Name=WP_043135409.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012908943.1;locus_tag=IY40_RS00060;product=ParA family protein;protein_id=WP_043135409.1;transl_table=11 NZ_JPQY01000001.1 RefSeq gene 10340 11119 . - . ID=gene-IY40_RS00065;Name=IY40_RS00065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS00065;old_locus_tag=IY40_00070 NZ_JPQY01000001.1 Protein Homology CDS 10340 11119 . - 0 ID=cds-WP_043135411.1;Parent=gene-IY40_RS00065;Dbxref=GenBank:WP_043135411.1;Name=WP_043135411.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004152340.1;locus_tag=IY40_RS00065;product=site-specific integrase;protein_id=WP_043135411.1;transl_table=11 NZ_JPQY01000001.1 RefSeq gene 11116 11451 . - . ID=gene-IY40_RS00070;Name=IY40_RS00070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS00070;old_locus_tag=IY40_00075 NZ_JPQY01000001.1 Protein Homology CDS 11116 11451 . - 0 ID=cds-WP_043135413.1;Parent=gene-IY40_RS00070;Dbxref=GenBank:WP_043135413.1;Name=WP_043135413.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017694190.1;locus_tag=IY40_RS00070;product=hypothetical protein;protein_id=WP_043135413.1;transl_table=11 NZ_JPQY01000001.1 RefSeq gene 11458 11856 . - . ID=gene-IY40_RS00075;Name=IY40_RS00075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS00075;old_locus_tag=IY40_00080 NZ_JPQY01000001.1 Protein Homology CDS 11458 11856 . - 0 ID=cds-WP_161781778.1;Parent=gene-IY40_RS00075;Dbxref=GenBank:WP_161781778.1;Name=WP_161781778.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017694189.1;locus_tag=IY40_RS00075;product=hypothetical protein;protein_id=WP_161781778.1;transl_table=11 NZ_JPQY01000001.1 RefSeq gene 11904 12233 . - . ID=gene-IY40_RS00080;Name=IY40_RS00080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS00080;old_locus_tag=IY40_00085 NZ_JPQY01000001.1 Protein Homology CDS 11904 12233 . - 0 ID=cds-WP_043135415.1;Parent=gene-IY40_RS00080;Dbxref=GenBank:WP_043135415.1;Name=WP_043135415.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004152337.1;locus_tag=IY40_RS00080;product=hypothetical protein;protein_id=WP_043135415.1;transl_table=11 NZ_JPQY01000001.1 RefSeq gene 12267 12626 . - . ID=gene-IY40_RS00085;Name=IY40_RS00085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS00085;old_locus_tag=IY40_00090 NZ_JPQY01000001.1 Protein Homology CDS 12267 12626 . - 0 ID=cds-WP_043135417.1;Parent=gene-IY40_RS00085;Dbxref=GenBank:WP_043135417.1;Name=WP_043135417.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014172329.1;locus_tag=IY40_RS00085;product=hypothetical protein;protein_id=WP_043135417.1;transl_table=11 NZ_JPQY01000001.1 RefSeq gene 13182 13793 . + . ID=gene-IY40_RS00090;Name=IY40_RS00090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS00090;old_locus_tag=IY40_00095 NZ_JPQY01000001.1 Protein Homology CDS 13182 13793 . + 0 ID=cds-WP_043135419.1;Parent=gene-IY40_RS00090;Dbxref=GenBank:WP_043135419.1;Name=WP_043135419.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000209846.1;locus_tag=IY40_RS00090;product=DNA-binding protein;protein_id=WP_043135419.1;transl_table=11 NZ_JPQY01000001.1 RefSeq gene 13790 14596 . + . ID=gene-IY40_RS26440;Name=IY40_RS26440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS26440 NZ_JPQY01000001.1 GeneMarkS-2+ CDS 13790 14596 . + 0 ID=cds-WP_050505114.1;Parent=gene-IY40_RS26440;Dbxref=GenBank:WP_050505114.1;Name=WP_050505114.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IY40_RS26440;product=hypothetical protein;protein_id=WP_050505114.1;transl_table=11 NZ_JPQY01000001.1 RefSeq gene 14990 15199 . - . ID=gene-IY40_RS00105;Name=IY40_RS00105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS00105;old_locus_tag=IY40_00110 NZ_JPQY01000001.1 GeneMarkS-2+ CDS 14990 15199 . - 0 ID=cds-WP_043135425.1;Parent=gene-IY40_RS00105;Dbxref=GenBank:WP_043135425.1;Name=WP_043135425.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IY40_RS00105;product=hypothetical protein;protein_id=WP_043135425.1;transl_table=11 NZ_JPQY01000001.1 RefSeq gene 15433 15678 . + . ID=gene-IY40_RS00110;Name=IY40_RS00110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS00110;old_locus_tag=IY40_00115 NZ_JPQY01000001.1 Protein Homology CDS 15433 15678 . + 0 ID=cds-WP_043135428.1;Parent=gene-IY40_RS00110;Dbxref=GenBank:WP_043135428.1;Name=WP_043135428.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017891073.1;locus_tag=IY40_RS00110;product=hypothetical protein;protein_id=WP_043135428.1;transl_table=11 NZ_JPQY01000001.1 RefSeq gene 15683 16657 . + . ID=gene-IY40_RS00115;Name=IY40_RS00115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS00115 NZ_JPQY01000001.1 Protein Homology CDS 15683 16657 . + 0 ID=cds-WP_050505115.1;Parent=gene-IY40_RS00115;Dbxref=GenBank:WP_050505115.1;Name=WP_050505115.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000145248.1;locus_tag=IY40_RS00115;product=hypothetical protein;protein_id=WP_050505115.1;transl_table=11 NZ_JPQY01000001.1 RefSeq gene 16654 16959 . + . ID=gene-IY40_RS00120;Name=IY40_RS00120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS00120;old_locus_tag=IY40_00125 NZ_JPQY01000001.1 GeneMarkS-2+ CDS 16654 16959 . + 0 ID=cds-WP_043135431.1;Parent=gene-IY40_RS00120;Dbxref=GenBank:WP_043135431.1;Name=WP_043135431.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IY40_RS00120;product=hypothetical protein;protein_id=WP_043135431.1;transl_table=11 NZ_JPQY01000001.1 RefSeq gene 17009 17662 . + . ID=gene-IY40_RS25855;Name=IY40_RS25855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS25855;old_locus_tag=IY40_00130 NZ_JPQY01000001.1 Protein Homology CDS 17009 17662 . + 0 ID=cds-WP_043135433.1;Parent=gene-IY40_RS25855;Dbxref=GenBank:WP_043135433.1;Name=WP_043135433.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009653216.1;locus_tag=IY40_RS25855;product=DUF6884 domain-containing protein;protein_id=WP_043135433.1;transl_table=11 NZ_JPQY01000001.1 RefSeq gene 17677 18168 . - . ID=gene-IY40_RS00130;Name=IY40_RS00130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS00130;old_locus_tag=IY40_00135 NZ_JPQY01000001.1 Protein Homology CDS 17677 18168 . - 0 ID=cds-WP_043135434.1;Parent=gene-IY40_RS00130;Dbxref=GenBank:WP_043135434.1;Name=WP_043135434.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016255.6;locus_tag=IY40_RS00130;product=ProQ/FINO family protein;protein_id=WP_043135434.1;transl_table=11 NZ_JPQY01000001.1 RefSeq gene 18383 18883 . + . ID=gene-IY40_RS00135;Name=IY40_RS00135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS00135;old_locus_tag=IY40_00140 NZ_JPQY01000001.1 GeneMarkS-2+ CDS 18383 18883 . + 0 ID=cds-WP_043135436.1;Parent=gene-IY40_RS00135;Dbxref=GenBank:WP_043135436.1;Name=WP_043135436.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IY40_RS00135;product=hypothetical protein;protein_id=WP_043135436.1;transl_table=11 NZ_JPQY01000001.1 RefSeq gene 19764 20624 . - . ID=gene-IY40_RS00140;Name=repA;gbkey=Gene;gene=repA;gene_biotype=protein_coding;locus_tag=IY40_RS00140;old_locus_tag=IY40_00145 NZ_JPQY01000001.1 Protein Homology CDS 19764 20624 . - 0 ID=cds-WP_043135439.1;Parent=gene-IY40_RS00140;Dbxref=GenBank:WP_043135439.1;Name=WP_043135439.1;Ontology_term=GO:0006276;gbkey=CDS;gene=repA;go_process=plasmid maintenance|0006276||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490498.3;locus_tag=IY40_RS00140;product=incFII family plasmid replication initiator RepA;protein_id=WP_043135439.1;transl_table=11 NZ_JPQY01000001.1 RefSeq gene 21411 21965 . + . ID=gene-IY40_RS24950;Name=IY40_RS24950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS24950 NZ_JPQY01000001.1 Protein Homology CDS 21411 21965 . + 0 ID=cds-WP_052977955.1;Parent=gene-IY40_RS24950;Dbxref=GenBank:WP_052977955.1;Name=WP_052977955.1;Ontology_term=GO:0006354,GO:0006355,GO:0140673;gbkey=CDS;go_process=DNA-templated transcription elongation|0006354||IEA,regulation of DNA-templated transcription|0006355||IEA,transcription elongation-coupled chromatin remodeling|0140673||IEA;inference=COORDINATES: protein motif:HMM:NF014417.6;locus_tag=IY40_RS24950;product=transcription termination/antitermination NusG family protein;protein_id=WP_052977955.1;transl_table=11 NZ_JPQY01000001.1 RefSeq gene 21952 22164 . + . ID=gene-IY40_RS24955;Name=IY40_RS24955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS24955;old_locus_tag=IY40_00150 NZ_JPQY01000001.1 Protein Homology CDS 21952 22164 . + 0 ID=cds-WP_043135443.1;Parent=gene-IY40_RS24955;Dbxref=GenBank:WP_043135443.1;Name=WP_043135443.1;Ontology_term=GO:0008270;gbkey=CDS;go_function=zinc ion binding|0008270||IEA;inference=COORDINATES: protein motif:HMM:NF013427.6;locus_tag=IY40_RS24955;product=TraR/DksA C4-type zinc finger protein;protein_id=WP_043135443.1;transl_table=11 NZ_JPQY01000001.1 RefSeq gene 22279 22521 . + . ID=gene-IY40_RS25860;Name=IY40_RS25860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS25860 NZ_JPQY01000001.1 GeneMarkS-2+ CDS 22279 22521 . + 0 ID=cds-WP_152561281.1;Parent=gene-IY40_RS25860;Dbxref=GenBank:WP_152561281.1;Name=WP_152561281.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IY40_RS25860;product=hypothetical protein;protein_id=WP_152561281.1;transl_table=11 NZ_JPQY01000001.1 RefSeq gene 22518 23558 . + . ID=gene-IY40_RS24960;Name=IY40_RS24960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS24960 NZ_JPQY01000001.1 Protein Homology CDS 22518 23558 . + 0 ID=cds-WP_072008217.1;Parent=gene-IY40_RS24960;Dbxref=GenBank:WP_072008217.1;Name=WP_072008217.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022136.6;locus_tag=IY40_RS24960;product=TcpQ domain-containing protein;protein_id=WP_072008217.1;transl_table=11 NZ_JPQY01000001.1 RefSeq gene 23568 23996 . + . ID=gene-IY40_RS24790;Name=pilM;gbkey=Gene;gene=pilM;gene_biotype=protein_coding;locus_tag=IY40_RS24790 NZ_JPQY01000001.1 Protein Homology CDS 23568 23996 . + 0 ID=cds-WP_050505117.1;Parent=gene-IY40_RS24790;Dbxref=GenBank:WP_050505117.1;Name=WP_050505117.1;gbkey=CDS;gene=pilM;inference=COORDINATES: protein motif:HMM:NF019064.6;locus_tag=IY40_RS24790;product=type IV pilus biogenesis protein PilM;protein_id=WP_050505117.1;transl_table=11 NZ_JPQY01000001.1 RefSeq gene 24047 25660 . + . ID=gene-IY40_RS00155;Name=pilN;gbkey=Gene;gene=pilN;gene_biotype=protein_coding;locus_tag=IY40_RS00155;old_locus_tag=IY40_00165 NZ_JPQY01000001.1 Protein Homology CDS 24047 25660 . + 0 ID=cds-WP_043135446.1;Parent=gene-IY40_RS00155;Dbxref=GenBank:WP_043135446.1;Name=WP_043135446.1;Ontology_term=GO:0009297,GO:0009306,GO:0019867;gbkey=CDS;gene=pilN;go_component=outer membrane|0019867||IEA;go_process=pilus assembly|0009297||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000984842.1;locus_tag=IY40_RS00155;product=PilN family type IVB pilus formation outer membrane protein;protein_id=WP_043135446.1;transl_table=11 NZ_JPQY01000001.1 RefSeq gene 25664 26941 . + . ID=gene-IY40_RS00160;Name=pilO2;gbkey=Gene;gene=pilO2;gene_biotype=protein_coding;locus_tag=IY40_RS00160;old_locus_tag=IY40_00170 NZ_JPQY01000001.1 Protein Homology CDS 25664 26941 . + 0 ID=cds-WP_043135447.1;Parent=gene-IY40_RS00160;Dbxref=GenBank:WP_043135447.1;Name=WP_043135447.1;gbkey=CDS;gene=pilO2;inference=COORDINATES: protein motif:HMM:NF018562.6;locus_tag=IY40_RS00160;product=type 4b pilus protein PilO2;protein_id=WP_043135447.1;transl_table=11 NZ_JPQY01000001.1 RefSeq gene 26928 27437 . + . ID=gene-IY40_RS24965;Name=pilP;gbkey=Gene;gene=pilP;gene_biotype=protein_coding;locus_tag=IY40_RS24965 NZ_JPQY01000001.1 Protein Homology CDS 26928 27437 . + 0 ID=cds-WP_072008219.1;Parent=gene-IY40_RS24965;Dbxref=GenBank:WP_072008219.1;Name=WP_072008219.1;Ontology_term=GO:0009297;gbkey=CDS;gene=pilP;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: protein motif:HMM:TIGR03021.1;locus_tag=IY40_RS24965;product=type IV pilus biogenesis protein PilP;protein_id=WP_072008219.1;transl_table=11 NZ_JPQY01000001.1 RefSeq gene 27442 28962 . + . ID=gene-IY40_RS00165;Name=IY40_RS00165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS00165;old_locus_tag=IY40_00175 NZ_JPQY01000001.1 Protein Homology CDS 27442 28962 . + 0 ID=cds-WP_050505118.1;Parent=gene-IY40_RS00165;Dbxref=GenBank:WP_050505118.1;Name=WP_050505118.1;Ontology_term=GO:0009306,GO:0005524,GO:0016887,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017374638.1;locus_tag=IY40_RS00165;product=GspE/PulE family protein;protein_id=WP_050505118.1;transl_table=11 NZ_JPQY01000001.1 RefSeq gene 28952 30103 . + . ID=gene-IY40_RS00170;Name=IY40_RS00170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS00170;old_locus_tag=IY40_00180 NZ_JPQY01000001.1 Protein Homology CDS 28952 30103 . + 0 ID=cds-WP_072008220.1;Parent=gene-IY40_RS00170;Dbxref=GenBank:WP_072008220.1;Name=WP_072008220.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017374637.1;locus_tag=IY40_RS00170;product=type II secretion system F family protein;protein_id=WP_072008220.1;transl_table=11 NZ_JPQY01000001.1 RefSeq gene 30195 30776 . + . ID=gene-IY40_RS00175;Name=IY40_RS00175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS00175;old_locus_tag=IY40_00185 NZ_JPQY01000001.1 Protein Homology CDS 30195 30776 . + 0 ID=cds-WP_043135452.1;Parent=gene-IY40_RS00175;Dbxref=GenBank:WP_043135452.1;Name=WP_043135452.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017374636.1;locus_tag=IY40_RS00175;product=type 4 pilus major pilin;protein_id=WP_043135452.1;transl_table=11 NZ_JPQY01000001.1 RefSeq gene 30825 31304 . + . ID=gene-IY40_RS00180;Name=IY40_RS00180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS00180;old_locus_tag=IY40_00190 NZ_JPQY01000001.1 Protein Homology CDS 30825 31304 . + 0 ID=cds-WP_043135455.1;Parent=gene-IY40_RS00180;Dbxref=GenBank:WP_043135455.1;Name=WP_043135455.1;Ontology_term=GO:0000270,GO:0071555,GO:0008933;gbkey=CDS;go_function=peptidoglycan lytic transglycosylase activity|0008933||IEA;go_process=peptidoglycan metabolic process|0000270||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017374635.1;locus_tag=IY40_RS00180;product=lytic transglycosylase domain-containing protein;protein_id=WP_043135455.1;transl_table=11 NZ_JPQY01000001.1 RefSeq gene 31305 31949 . + . ID=gene-IY40_RS00185;Name=IY40_RS00185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS00185;old_locus_tag=IY40_00195 NZ_JPQY01000001.1 Protein Homology CDS 31305 31949 . + 0 ID=cds-WP_043135458.1;Parent=gene-IY40_RS00185;Dbxref=GenBank:WP_043135458.1;Name=WP_043135458.1;Ontology_term=GO:0004190,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=aspartic-type endopeptidase activity|0004190||IEA;inference=COORDINATES: protein motif:HMM:NF013632.6;locus_tag=IY40_RS00185;product=prepilin peptidase;protein_id=WP_043135458.1;transl_table=11 NZ_JPQY01000001.1 RefSeq gene 31946 33065 . + . ID=gene-IY40_RS00190;Name=pilV;end_range=33065,.;gbkey=Gene;gene=pilV;gene_biotype=protein_coding;locus_tag=IY40_RS00190;old_locus_tag=IY40_00200;partial=true NZ_JPQY01000001.1 Protein Homology CDS 31946 33065 . + 0 ID=cds-WP_043135461.1;Parent=gene-IY40_RS00190;Dbxref=GenBank:WP_043135461.1;Name=WP_043135461.1;end_range=33065,.;gbkey=CDS;gene=pilV;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017374632.1;locus_tag=IY40_RS00190;partial=true;product=shufflon system plasmid conjugative transfer pilus tip adhesin PilV;protein_id=WP_043135461.1;transl_table=11 ##sequence-region NZ_JPQY01000002.1 1 294980 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=615 NZ_JPQY01000002.1 RefSeq region 1 294980 . + . ID=NZ_JPQY01000002.1:1..294980;Dbxref=taxon:615;collected-by=Mahloro H. Serepa%3B Vincent M. Gray;collection-date=2013-04-11;country=South Africa: North West Province;gbkey=Src;genome=genomic;identified-by=Mahloro H. Serepa%3B Vincent M. Gray;isolation-source=entomopathogenic nematode Oscheius sp. MCB living in soil;mol_type=genomic DNA;nat-host=Oscheius sp. MCB;strain=MCB NZ_JPQY01000002.1 RefSeq gene 83 198 . + . ID=gene-IY40_RS00195;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=IY40_RS00195;old_locus_tag=IY40_00205 NZ_JPQY01000002.1 cmsearch rRNA 83 198 . + . ID=rna-IY40_RS00195;Parent=gene-IY40_RS00195;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=IY40_RS00195;product=5S ribosomal RNA NZ_JPQY01000002.1 cmsearch exon 83 198 . + . ID=exon-IY40_RS00195-1;Parent=rna-IY40_RS00195;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=IY40_RS00195;product=5S ribosomal RNA NZ_JPQY01000002.1 RefSeq gene 293 369 . + . ID=gene-IY40_RS00200;Name=IY40_RS00200;gbkey=Gene;gene_biotype=tRNA;locus_tag=IY40_RS00200;old_locus_tag=IY40_00210 NZ_JPQY01000002.1 tRNAscan-SE tRNA 293 369 . + . ID=rna-IY40_RS00200;Parent=gene-IY40_RS00200;anticodon=(pos:327..329);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=IY40_RS00200;product=tRNA-Asp NZ_JPQY01000002.1 tRNAscan-SE exon 293 369 . + . ID=exon-IY40_RS00200-1;Parent=rna-IY40_RS00200;anticodon=(pos:327..329);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=IY40_RS00200;product=tRNA-Asp NZ_JPQY01000002.1 RefSeq gene 582 1385 . + . ID=gene-IY40_RS00205;Name=dkgB;gbkey=Gene;gene=dkgB;gene_biotype=protein_coding;locus_tag=IY40_RS00205;old_locus_tag=IY40_00215 NZ_JPQY01000002.1 Protein Homology CDS 582 1385 . + 0 ID=cds-WP_043135486.1;Parent=gene-IY40_RS00205;Dbxref=GenBank:WP_043135486.1;Name=WP_043135486.1;Ontology_term=GO:0047834;gbkey=CDS;gene=dkgB;go_function=D-threo-aldose 1-dehydrogenase activity|0047834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015376713.1;locus_tag=IY40_RS00205;product=2%2C5-didehydrogluconate reductase DkgB;protein_id=WP_043135486.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 1433 2320 . - . ID=gene-IY40_RS00210;Name=yafC;gbkey=Gene;gene=yafC;gene_biotype=protein_coding;locus_tag=IY40_RS00210;old_locus_tag=IY40_00220 NZ_JPQY01000002.1 Protein Homology CDS 1433 2320 . - 0 ID=cds-WP_025301648.1;Parent=gene-IY40_RS00210;Dbxref=GenBank:WP_025301648.1;Name=WP_025301648.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=yafC;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004930183.1;locus_tag=IY40_RS00210;product=DNA-binding transcriptional regulator YafC;protein_id=WP_025301648.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 2426 3601 . + . ID=gene-IY40_RS00215;Name=IY40_RS00215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS00215;old_locus_tag=IY40_00225 NZ_JPQY01000002.1 Protein Homology CDS 2426 3601 . + 0 ID=cds-WP_043135492.1;Parent=gene-IY40_RS00215;Dbxref=GenBank:WP_043135492.1;Name=WP_043135492.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006322416.1;locus_tag=IY40_RS00215;product=MFS transporter;protein_id=WP_043135492.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 3843 4637 . + . ID=gene-IY40_RS00220;Name=IY40_RS00220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS00220;old_locus_tag=IY40_00230 NZ_JPQY01000002.1 Protein Homology CDS 3843 4637 . + 0 ID=cds-WP_025160092.1;Parent=gene-IY40_RS00220;Dbxref=GenBank:WP_025160092.1;Name=WP_025160092.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013811593.1;locus_tag=IY40_RS00220;product=endonuclease/exonuclease/phosphatase family protein;protein_id=WP_025160092.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 4690 6072 . - . ID=gene-IY40_RS00225;Name=mltD;gbkey=Gene;gene=mltD;gene_biotype=protein_coding;locus_tag=IY40_RS00225;old_locus_tag=IY40_00235 NZ_JPQY01000002.1 Protein Homology CDS 4690 6072 . - 0 ID=cds-WP_089181660.1;Parent=gene-IY40_RS00225;Dbxref=GenBank:WP_089181660.1;Name=WP_089181660.1;Ontology_term=GO:0000270,GO:0008933,GO:0016020;gbkey=CDS;gene=mltD;go_component=membrane|0016020||IEA;go_function=peptidoglycan lytic transglycosylase activity|0008933||IEA;go_process=peptidoglycan metabolic process|0000270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004930188.1;locus_tag=IY40_RS00225;product=murein transglycosylase D;protein_id=WP_089181660.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 6144 6899 . - . ID=gene-IY40_RS00230;Name=gloB;gbkey=Gene;gene=gloB;gene_biotype=protein_coding;locus_tag=IY40_RS00230;old_locus_tag=IY40_00240 NZ_JPQY01000002.1 Protein Homology CDS 6144 6899 . - 0 ID=cds-WP_043135494.1;Parent=gene-IY40_RS00230;Dbxref=GenBank:WP_043135494.1;Name=WP_043135494.1;Ontology_term=GO:0019243,GO:0004416;gbkey=CDS;gene=gloB;go_function=hydroxyacylglutathione hydrolase activity|0004416||IEA;go_process=methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione|0019243||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012005354.1;locus_tag=IY40_RS00230;product=hydroxyacylglutathione hydrolase;protein_id=WP_043135494.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 6944 7663 . + . ID=gene-IY40_RS00235;Name=IY40_RS00235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS00235;old_locus_tag=IY40_00245 NZ_JPQY01000002.1 Protein Homology CDS 6944 7663 . + 0 ID=cds-WP_025301652.1;Parent=gene-IY40_RS00235;Dbxref=GenBank:WP_025301652.1;Name=WP_025301652.1;Ontology_term=GO:0008168,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004390358.1;locus_tag=IY40_RS00235;product=class I SAM-dependent methyltransferase;protein_id=WP_025301652.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 7660 8127 . - . ID=gene-IY40_RS00240;Name=rnhA;gbkey=Gene;gene=rnhA;gene_biotype=protein_coding;locus_tag=IY40_RS00240;old_locus_tag=IY40_00250 NZ_JPQY01000002.1 Protein Homology CDS 7660 8127 . - 0 ID=cds-WP_033649910.1;Parent=gene-IY40_RS00240;Dbxref=GenBank:WP_033649910.1;Name=WP_033649910.1;Ontology_term=GO:0003676,GO:0004523;gbkey=CDS;gene=rnhA;go_function=nucleic acid binding|0003676||IEA,RNA-DNA hybrid ribonuclease activity|0004523||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013507980.1;locus_tag=IY40_RS00240;product=ribonuclease HI;protein_id=WP_033649910.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 8200 8943 . + . ID=gene-IY40_RS00245;Name=dnaQ;gbkey=Gene;gene=dnaQ;gene_biotype=protein_coding;locus_tag=IY40_RS00245;old_locus_tag=IY40_00255 NZ_JPQY01000002.1 Protein Homology CDS 8200 8943 . + 0 ID=cds-WP_038871384.1;Parent=gene-IY40_RS00245;Dbxref=GenBank:WP_038871384.1;Name=WP_038871384.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887;gbkey=CDS;gene=dnaQ;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004930195.1;locus_tag=IY40_RS00245;product=DNA polymerase III subunit epsilon;protein_id=WP_038871384.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 9089 9165 . + . ID=gene-IY40_RS00250;Name=IY40_RS00250;gbkey=Gene;gene_biotype=tRNA;locus_tag=IY40_RS00250;old_locus_tag=IY40_00260 NZ_JPQY01000002.1 tRNAscan-SE tRNA 9089 9165 . + . ID=rna-IY40_RS00250;Parent=gene-IY40_RS00250;anticodon=(pos:9123..9125);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=IY40_RS00250;product=tRNA-Asp NZ_JPQY01000002.1 tRNAscan-SE exon 9089 9165 . + . ID=exon-IY40_RS00250-1;Parent=rna-IY40_RS00250;anticodon=(pos:9123..9125);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=IY40_RS00250;product=tRNA-Asp NZ_JPQY01000002.1 RefSeq gene 9272 11512 . - . ID=gene-IY40_RS00255;Name=IY40_RS00255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS00255;old_locus_tag=IY40_00265 NZ_JPQY01000002.1 Protein Homology CDS 9272 11512 . - 0 ID=cds-WP_043135504.1;Parent=gene-IY40_RS00255;Dbxref=GenBank:WP_043135504.1;Name=WP_043135504.1;Ontology_term=GO:0015891,GO:0015343,GO:0038023,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=siderophore-iron transmembrane transporter activity|0015343||IEA,signaling receptor activity|0038023||IEA;go_process=siderophore transport|0015891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211646.1;locus_tag=IY40_RS00255;product=TonB-dependent siderophore receptor;protein_id=WP_043135504.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 11741 12619 . + . ID=gene-IY40_RS00260;Name=IY40_RS00260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS00260;old_locus_tag=IY40_00270 NZ_JPQY01000002.1 Protein Homology CDS 11741 12619 . + 0 ID=cds-WP_043135506.1;Parent=gene-IY40_RS00260;Dbxref=GenBank:WP_043135506.1;Name=WP_043135506.1;Ontology_term=GO:0015891,GO:0071949;gbkey=CDS;go_function=FAD binding|0071949||IEA;go_process=siderophore transport|0015891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015376718.1;locus_tag=IY40_RS00260;product=siderophore-interacting protein;protein_id=WP_043135506.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 12708 13481 . - . ID=gene-IY40_RS00265;Name=IY40_RS00265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS00265;old_locus_tag=IY40_00275 NZ_JPQY01000002.1 Protein Homology CDS 12708 13481 . - 0 ID=cds-WP_043135508.1;Parent=gene-IY40_RS00265;Dbxref=GenBank:WP_043135508.1;Name=WP_043135508.1;Ontology_term=GO:0008152;gbkey=CDS;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017891729.1;locus_tag=IY40_RS00265;product=amidohydrolase;protein_id=WP_043135508.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 13469 14629 . - . ID=gene-IY40_RS00270;Name=IY40_RS00270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS00270;old_locus_tag=IY40_00280 NZ_JPQY01000002.1 Protein Homology CDS 13469 14629 . - 0 ID=cds-WP_043135510.1;Parent=gene-IY40_RS00270;Dbxref=GenBank:WP_043135510.1;Name=WP_043135510.1;Ontology_term=GO:0008483,GO:0016740;gbkey=CDS;go_function=transaminase activity|0008483||IEA,transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105603.1;locus_tag=IY40_RS00270;product=pyridoxal phosphate-dependent aminotransferase;protein_id=WP_043135510.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 14794 15408 . + . ID=gene-IY40_RS00275;Name=IY40_RS00275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS00275;old_locus_tag=IY40_00285 NZ_JPQY01000002.1 Protein Homology CDS 14794 15408 . + 0 ID=cds-WP_043135512.1;Parent=gene-IY40_RS00275;Dbxref=GenBank:WP_043135512.1;Name=WP_043135512.1;Ontology_term=GO:0019509,GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;go_process=L-methionine salvage from methylthioadenosine|0019509||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041418881.1;locus_tag=IY40_RS00275;product=methylthioribulose 1-phosphate dehydratase;protein_id=WP_043135512.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 15405 16094 . + . ID=gene-IY40_RS00280;Name=mtnC;gbkey=Gene;gene=mtnC;gene_biotype=protein_coding;locus_tag=IY40_RS00280;old_locus_tag=IY40_00290 NZ_JPQY01000002.1 Protein Homology CDS 15405 16094 . + 0 ID=cds-WP_043135516.1;Parent=gene-IY40_RS00280;Dbxref=GenBank:WP_043135516.1;Name=WP_043135516.1;Ontology_term=GO:0019509,GO:0000287,GO:0043874;gbkey=CDS;gene=mtnC;go_function=magnesium ion binding|0000287||IEA,acireductone synthase activity|0043874||IEA;go_process=L-methionine salvage from methylthioadenosine|0019509||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013811624.1;locus_tag=IY40_RS00280;product=acireductone synthase;protein_id=WP_043135516.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 16091 16633 . + . ID=gene-IY40_RS00285;Name=IY40_RS00285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS00285;old_locus_tag=IY40_00295 NZ_JPQY01000002.1 Protein Homology CDS 16091 16633 . + 0 ID=cds-WP_043135518.1;Parent=gene-IY40_RS00285;Dbxref=GenBank:WP_043135518.1;Name=WP_043135518.1;Ontology_term=GO:0019509,GO:0005506,GO:0010308,GO:0010309,GO:0016151;gbkey=CDS;go_function=iron ion binding|0005506||IEA,acireductone dioxygenase (Ni2+-requiring) activity|0010308||IEA,acireductone dioxygenase [iron(II)-requiring] activity|0010309||IEA,nickel cation binding|0016151||IEA;go_process=L-methionine salvage from methylthioadenosine|0019509||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004949046.1;locus_tag=IY40_RS00285;product=1%2C2-dihydroxy-3-keto-5-methylthiopentene dioxygenase;protein_id=WP_043135518.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 16651 17679 . - . ID=gene-IY40_RS00290;Name=mtnA;gbkey=Gene;gene=mtnA;gene_biotype=protein_coding;locus_tag=IY40_RS00290;old_locus_tag=IY40_00300 NZ_JPQY01000002.1 Protein Homology CDS 16651 17679 . - 0 ID=cds-WP_025301662.1;Parent=gene-IY40_RS00290;Dbxref=GenBank:WP_025301662.1;Name=WP_025301662.1;Ontology_term=GO:0019509,GO:0046523;gbkey=CDS;gene=mtnA;go_function=S-methyl-5-thioribose-1-phosphate isomerase activity|0046523||IEA;go_process=L-methionine salvage from methylthioadenosine|0019509||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016928996.1;locus_tag=IY40_RS00290;product=S-methyl-5-thioribose-1-phosphate isomerase;protein_id=WP_025301662.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 17825 19024 . + . ID=gene-IY40_RS00295;Name=mtnK;gbkey=Gene;gene=mtnK;gene_biotype=protein_coding;locus_tag=IY40_RS00295;old_locus_tag=IY40_00305 NZ_JPQY01000002.1 Protein Homology CDS 17825 19024 . + 0 ID=cds-WP_025301663.1;Parent=gene-IY40_RS00295;Dbxref=GenBank:WP_025301663.1;Name=WP_025301663.1;Ontology_term=GO:0009086,GO:0046522;gbkey=CDS;gene=mtnK;go_function=S-methyl-5-thioribose kinase activity|0046522||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013649402.1;locus_tag=IY40_RS00295;product=S-methyl-5-thioribose kinase;protein_id=WP_025301663.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 19098 19250 . - . ID=gene-IY40_RS00300;Name=IY40_RS00300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS00300;old_locus_tag=IY40_00310 NZ_JPQY01000002.1 Protein Homology CDS 19098 19250 . - 0 ID=cds-WP_043135520.1;Parent=gene-IY40_RS00300;Dbxref=GenBank:WP_043135520.1;Name=WP_043135520.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019454312.1;locus_tag=IY40_RS00300;product=Hok/Gef family protein;protein_id=WP_043135520.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 19541 21997 . - . ID=gene-IY40_RS00305;Name=fadE;gbkey=Gene;gene=fadE;gene_biotype=protein_coding;locus_tag=IY40_RS00305;old_locus_tag=IY40_00315 NZ_JPQY01000002.1 Protein Homology CDS 19541 21997 . - 0 ID=cds-WP_025301664.1;Parent=gene-IY40_RS00305;Dbxref=GenBank:WP_025301664.1;Name=WP_025301664.1;Ontology_term=GO:0033539,GO:0003995,GO:0050660;gbkey=CDS;gene=fadE;go_function=acyl-CoA dehydrogenase activity|0003995||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=fatty acid beta-oxidation using acyl-CoA dehydrogenase|0033539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225261.1;locus_tag=IY40_RS00305;product=acyl-CoA dehydrogenase FadE;protein_id=WP_025301664.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 22244 22825 . + . ID=gene-IY40_RS00310;Name=lpcA;gbkey=Gene;gene=lpcA;gene_biotype=protein_coding;locus_tag=IY40_RS00310;old_locus_tag=IY40_00320 NZ_JPQY01000002.1 Protein Homology CDS 22244 22825 . + 0 ID=cds-WP_004930220.1;Parent=gene-IY40_RS00310;Dbxref=GenBank:WP_004930220.1;Name=WP_004930220.1;Ontology_term=GO:1901135,GO:0008968;gbkey=CDS;gene=lpcA;go_function=D-sedoheptulose 7-phosphate isomerase activity|0008968||IEA;go_process=carbohydrate derivative metabolic process|1901135||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010981422.1;locus_tag=IY40_RS00310;product=D-sedoheptulose 7-phosphate isomerase;protein_id=WP_004930220.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 22929 23732 . + . ID=gene-IY40_RS00315;Name=IY40_RS00315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS00315;old_locus_tag=IY40_00325 NZ_JPQY01000002.1 Protein Homology CDS 22929 23732 . + 0 ID=cds-WP_043135522.1;Parent=gene-IY40_RS00315;Dbxref=GenBank:WP_043135522.1;Name=WP_043135522.1;Ontology_term=GO:0006541,GO:0016740;gbkey=CDS;go_function=transferase activity|0016740||IEA;go_process=glutamine metabolic process|0006541||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019454310.1;locus_tag=IY40_RS00315;product=class II glutamine amidotransferase;protein_id=WP_043135522.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 23667 24434 . - . ID=gene-IY40_RS00320;Name=dpaA;gbkey=Gene;gene=dpaA;gene_biotype=protein_coding;locus_tag=IY40_RS00320;old_locus_tag=IY40_00330 NZ_JPQY01000002.1 Protein Homology CDS 23667 24434 . - 0 ID=cds-WP_025301666.1;Parent=gene-IY40_RS00320;Dbxref=GenBank:WP_025301666.1;Name=WP_025301666.1;gbkey=CDS;gene=dpaA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013811632.1;locus_tag=IY40_RS00320;product=peptidoglycan meso-diaminopimelic acid protein amidase;protein_id=WP_025301666.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 24989 26338 . + . ID=gene-IY40_RS00325;Name=IY40_RS00325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS00325;old_locus_tag=IY40_00335 NZ_JPQY01000002.1 Protein Homology CDS 24989 26338 . + 0 ID=cds-WP_043135525.1;Parent=gene-IY40_RS00325;Dbxref=GenBank:WP_043135525.1;Name=WP_043135525.1;Ontology_term=GO:0006814,GO:0016655;gbkey=CDS;go_function=oxidoreductase activity%2C acting on NAD(P)H%2C quinone or similar compound as acceptor|0016655||IEA;go_process=sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019082505.1;locus_tag=IY40_RS00325;product=Na(+)-translocating NADH-quinone reductase subunit A;protein_id=WP_043135525.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 26342 27583 . + . ID=gene-IY40_RS00330;Name=IY40_RS00330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS00330;old_locus_tag=IY40_00340 NZ_JPQY01000002.1 Protein Homology CDS 26342 27583 . + 0 ID=cds-WP_016928991.1;Parent=gene-IY40_RS00330;Dbxref=GenBank:WP_016928991.1;Name=WP_016928991.1;Ontology_term=GO:0022904,GO:0055085,GO:0010181,GO:0016655,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=FMN binding|0010181||IEA,oxidoreductase activity%2C acting on NAD(P)H%2C quinone or similar compound as acceptor|0016655||IEA;go_process=respiratory electron transport chain|0022904||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004704034.1;locus_tag=IY40_RS00330;product=NADH:ubiquinone reductase (Na(+)-transporting) subunit B;protein_id=WP_016928991.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 27573 28367 . + . ID=gene-IY40_RS00335;Name=IY40_RS00335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS00335;old_locus_tag=IY40_00345 NZ_JPQY01000002.1 Protein Homology CDS 27573 28367 . + 0 ID=cds-WP_043135528.1;Parent=gene-IY40_RS00335;Dbxref=GenBank:WP_043135528.1;Name=WP_043135528.1;Ontology_term=GO:0006814,GO:0016655,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=oxidoreductase activity%2C acting on NAD(P)H%2C quinone or similar compound as acceptor|0016655||IEA;go_process=sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015376731.1;locus_tag=IY40_RS00335;product=Na(+)-translocating NADH-quinone reductase subunit C;protein_id=WP_043135528.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 28360 28989 . + . ID=gene-IY40_RS00340;Name=IY40_RS00340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS00340;old_locus_tag=IY40_00350 NZ_JPQY01000002.1 Protein Homology CDS 28360 28989 . + 0 ID=cds-WP_043135530.1;Parent=gene-IY40_RS00340;Dbxref=GenBank:WP_043135530.1;Name=WP_043135530.1;Ontology_term=GO:0016655,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=oxidoreductase activity%2C acting on NAD(P)H%2C quinone or similar compound as acceptor|0016655||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006323797.1;locus_tag=IY40_RS00340;product=NADH:ubiquinone reductase (Na(+)-transporting) subunit D;protein_id=WP_043135530.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 28996 29592 . + . ID=gene-IY40_RS00345;Name=nqrE;gbkey=Gene;gene=nqrE;gene_biotype=protein_coding;locus_tag=IY40_RS00345;old_locus_tag=IY40_00355 NZ_JPQY01000002.1 Protein Homology CDS 28996 29592 . + 0 ID=cds-WP_004930235.1;Parent=gene-IY40_RS00345;Dbxref=GenBank:WP_004930235.1;Name=WP_004930235.1;Ontology_term=GO:0006814,GO:0016655;gbkey=CDS;gene=nqrE;go_function=oxidoreductase activity%2C acting on NAD(P)H%2C quinone or similar compound as acceptor|0016655||IEA;go_process=sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225269.1;locus_tag=IY40_RS00345;product=NADH:ubiquinone reductase (Na(+)-transporting) subunit E;protein_id=WP_004930235.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 29608 30831 . + . ID=gene-IY40_RS00350;Name=nqrF;gbkey=Gene;gene=nqrF;gene_biotype=protein_coding;locus_tag=IY40_RS00350;old_locus_tag=IY40_00360 NZ_JPQY01000002.1 Protein Homology CDS 29608 30831 . + 0 ID=cds-WP_043135532.1;Parent=gene-IY40_RS00350;Dbxref=GenBank:WP_043135532.1;Name=WP_043135532.1;Ontology_term=GO:0006814,GO:0016655,GO:0051537,GO:0016020;gbkey=CDS;gene=nqrF;go_component=membrane|0016020||IEA;go_function=oxidoreductase activity%2C acting on NAD(P)H%2C quinone or similar compound as acceptor|0016655||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;go_process=sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225270.1;locus_tag=IY40_RS00350;product=NADH:ubiquinone reductase (Na(+)-transporting) subunit F;protein_id=WP_043135532.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 30815 31864 . + . ID=gene-IY40_RS00355;Name=IY40_RS00355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS00355;old_locus_tag=IY40_00365 NZ_JPQY01000002.1 Protein Homology CDS 30815 31864 . + 0 ID=cds-WP_043135534.1;Parent=gene-IY40_RS00355;Dbxref=GenBank:WP_043135534.1;Name=WP_043135534.1;Ontology_term=GO:0017013,GO:0016740,GO:0046872,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=transferase activity|0016740||IEA,metal ion binding|0046872||IEA;go_process=protein flavinylation|0017013||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004930242.1;locus_tag=IY40_RS00355;product=FAD:protein FMN transferase;protein_id=WP_043135534.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 31872 32099 . + . ID=gene-IY40_RS00360;Name=nqrM;gbkey=Gene;gene=nqrM;gene_biotype=protein_coding;locus_tag=IY40_RS00360;old_locus_tag=IY40_00370 NZ_JPQY01000002.1 Protein Homology CDS 31872 32099 . + 0 ID=cds-WP_016928987.1;Parent=gene-IY40_RS00360;Dbxref=GenBank:WP_016928987.1;Name=WP_016928987.1;gbkey=CDS;gene=nqrM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002214684.1;locus_tag=IY40_RS00360;product=(Na+)-NQR maturation NqrM;protein_id=WP_016928987.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 32126 33022 . - . ID=gene-IY40_RS00365;Name=IY40_RS00365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS00365;old_locus_tag=IY40_00375 NZ_JPQY01000002.1 Protein Homology CDS 32126 33022 . - 0 ID=cds-WP_043135535.1;Parent=gene-IY40_RS00365;Dbxref=GenBank:WP_043135535.1;Name=WP_043135535.1;Ontology_term=GO:0006629,GO:0008081;gbkey=CDS;go_function=phosphoric diester hydrolase activity|0008081||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006323800.1;locus_tag=IY40_RS00365;product=glycerophosphodiester phosphodiesterase family protein;protein_id=WP_043135535.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 33206 34267 . + . ID=gene-IY40_RS00370;Name=dinB;gbkey=Gene;gene=dinB;gene_biotype=protein_coding;locus_tag=IY40_RS00370;old_locus_tag=IY40_00380 NZ_JPQY01000002.1 Protein Homology CDS 33206 34267 . + 0 ID=cds-WP_043135537.1;Parent=gene-IY40_RS00370;Dbxref=GenBank:WP_043135537.1;Name=WP_043135537.1;Ontology_term=GO:0006281,GO:0003684,GO:0003887;gbkey=CDS;gene=dinB;go_function=damaged DNA binding|0003684||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005274935.1;locus_tag=IY40_RS00370;product=DNA polymerase IV;protein_id=WP_043135537.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 34309 35769 . - . ID=gene-IY40_RS00375;Name=pepD;gbkey=Gene;gene=pepD;gene_biotype=protein_coding;locus_tag=IY40_RS00375;old_locus_tag=IY40_00385 NZ_JPQY01000002.1 Protein Homology CDS 34309 35769 . - 0 ID=cds-WP_025301673.1;Parent=gene-IY40_RS00375;Dbxref=GenBank:WP_025301673.1;Name=WP_025301673.1;Ontology_term=GO:0006508,GO:0016787;gbkey=CDS;gene=pepD;go_function=hydrolase activity|0016787||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005167527.1;locus_tag=IY40_RS00375;product=beta-Ala-His dipeptidase;protein_id=WP_025301673.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 36107 36565 . + . ID=gene-IY40_RS00380;Name=gpt;gbkey=Gene;gene=gpt;gene_biotype=protein_coding;locus_tag=IY40_RS00380;old_locus_tag=IY40_00390 NZ_JPQY01000002.1 Protein Homology CDS 36107 36565 . + 0 ID=cds-WP_025301674.1;Parent=gene-IY40_RS00380;Dbxref=GenBank:WP_025301674.1;Name=WP_025301674.1;Ontology_term=GO:0009116,GO:0000310;gbkey=CDS;gene=gpt;go_function=xanthine phosphoribosyltransferase activity|0000310||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225276.1;locus_tag=IY40_RS00380;product=xanthine phosphoribosyltransferase;protein_id=WP_025301674.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 36707 37954 . + . ID=gene-IY40_RS00385;Name=frsA;gbkey=Gene;gene=frsA;gene_biotype=protein_coding;locus_tag=IY40_RS00385;old_locus_tag=IY40_00395 NZ_JPQY01000002.1 Protein Homology CDS 36707 37954 . + 0 ID=cds-WP_021504999.1;Parent=gene-IY40_RS00385;Dbxref=GenBank:WP_021504999.1;Name=WP_021504999.1;Ontology_term=GO:0016788;gbkey=CDS;gene=frsA;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005167532.1;locus_tag=IY40_RS00385;product=esterase FrsA;protein_id=WP_021504999.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 38015 38416 . + . ID=gene-IY40_RS00390;Name=crl;gbkey=Gene;gene=crl;gene_biotype=protein_coding;locus_tag=IY40_RS00390;old_locus_tag=IY40_00400 NZ_JPQY01000002.1 Protein Homology CDS 38015 38416 . + 0 ID=cds-WP_004930258.1;Parent=gene-IY40_RS00390;Dbxref=GenBank:WP_004930258.1;Name=WP_004930258.1;Ontology_term=GO:0045893;gbkey=CDS;gene=crl;go_process=positive regulation of DNA-templated transcription|0045893||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000174676.1;locus_tag=IY40_RS00390;product=sigma factor-binding protein Crl;protein_id=WP_004930258.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 38533 39636 . + . ID=gene-IY40_RS00395;Name=proB;gbkey=Gene;gene=proB;gene_biotype=protein_coding;locus_tag=IY40_RS00395;old_locus_tag=IY40_00405 NZ_JPQY01000002.1 Protein Homology CDS 38533 39636 . + 0 ID=cds-WP_015376738.1;Parent=gene-IY40_RS00395;Dbxref=GenBank:WP_015376738.1;Name=WP_015376738.1;Ontology_term=GO:0055129,GO:0004349,GO:0005737;gbkey=CDS;gene=proB;go_component=cytoplasm|0005737||IEA;go_function=glutamate 5-kinase activity|0004349||IEA;go_process=L-proline biosynthetic process|0055129||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006118057.1;locus_tag=IY40_RS00395;product=glutamate 5-kinase;protein_id=WP_015376738.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 39646 40899 . + . ID=gene-IY40_RS00400;Name=proA;gbkey=Gene;gene=proA;gene_biotype=protein_coding;locus_tag=IY40_RS00400;old_locus_tag=IY40_00410 NZ_JPQY01000002.1 Protein Homology CDS 39646 40899 . + 0 ID=cds-WP_015376739.1;Parent=gene-IY40_RS00400;Dbxref=GenBank:WP_015376739.1;Name=WP_015376739.1;Ontology_term=GO:0055129,GO:0004350;gbkey=CDS;gene=proA;go_function=glutamate-5-semialdehyde dehydrogenase activity|0004350||IEA;go_process=L-proline biosynthetic process|0055129||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015376739.1;locus_tag=IY40_RS00400;product=glutamate-5-semialdehyde dehydrogenase;protein_id=WP_015376739.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 41090 41165 . + . ID=gene-IY40_RS00405;Name=IY40_RS00405;gbkey=Gene;gene_biotype=tRNA;locus_tag=IY40_RS00405;old_locus_tag=IY40_00415 NZ_JPQY01000002.1 tRNAscan-SE tRNA 41090 41165 . + . ID=rna-IY40_RS00405;Parent=gene-IY40_RS00405;anticodon=(pos:41123..41125);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=IY40_RS00405;product=tRNA-Thr NZ_JPQY01000002.1 tRNAscan-SE exon 41090 41165 . + . ID=exon-IY40_RS00405-1;Parent=rna-IY40_RS00405;anticodon=(pos:41123..41125);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=IY40_RS00405;product=tRNA-Thr NZ_JPQY01000002.1 RefSeq gene 41360 41578 . + . ID=gene-IY40_RS00410;Name=IY40_RS00410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS00410;old_locus_tag=IY40_00420 NZ_JPQY01000002.1 Protein Homology CDS 41360 41578 . + 0 ID=cds-WP_015376761.1;Parent=gene-IY40_RS00410;Dbxref=GenBank:WP_015376761.1;Name=WP_015376761.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004930265.1;locus_tag=IY40_RS00410;product=TM2 domain-containing protein;protein_id=WP_015376761.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 41630 42163 . - . ID=gene-IY40_RS00415;Name=IY40_RS00415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS00415;old_locus_tag=IY40_00425 NZ_JPQY01000002.1 Protein Homology CDS 41630 42163 . - 0 ID=cds-WP_043135545.1;Parent=gene-IY40_RS00415;Dbxref=GenBank:WP_043135545.1;Name=WP_043135545.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004930267.1;locus_tag=IY40_RS00415;product=hypothetical protein;protein_id=WP_043135545.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 42650 43765 . + . ID=gene-IY40_RS00420;Name=IY40_RS00420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS00420;old_locus_tag=IY40_00430 NZ_JPQY01000002.1 Protein Homology CDS 42650 43765 . + 0 ID=cds-WP_235211355.1;Parent=gene-IY40_RS00420;Dbxref=GenBank:WP_235211355.1;Name=WP_235211355.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016928947.1;locus_tag=IY40_RS00420;product=hypothetical protein;protein_id=WP_235211355.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 43769 44473 . - . ID=gene-IY40_RS00425;Name=IY40_RS00425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS00425;old_locus_tag=IY40_00435 NZ_JPQY01000002.1 Protein Homology CDS 43769 44473 . - 0 ID=cds-WP_043135546.1;Parent=gene-IY40_RS00425;Dbxref=GenBank:WP_043135546.1;Name=WP_043135546.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016928946.1;locus_tag=IY40_RS00425;product=hypothetical protein;protein_id=WP_043135546.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 44490 45665 . - . ID=gene-IY40_RS00430;Name=IY40_RS00430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS00430;old_locus_tag=IY40_00440 NZ_JPQY01000002.1 Protein Homology CDS 44490 45665 . - 0 ID=cds-WP_043135547.1;Parent=gene-IY40_RS00430;Dbxref=GenBank:WP_043135547.1;Name=WP_043135547.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016928945.1;locus_tag=IY40_RS00430;product=hypothetical protein;protein_id=WP_043135547.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 45662 46948 . - . ID=gene-IY40_RS00435;Name=IY40_RS00435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS00435;old_locus_tag=IY40_00445 NZ_JPQY01000002.1 Protein Homology CDS 45662 46948 . - 0 ID=cds-WP_025301680.1;Parent=gene-IY40_RS00435;Dbxref=GenBank:WP_025301680.1;Name=WP_025301680.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016928944.1;locus_tag=IY40_RS00435;product=hypothetical protein;protein_id=WP_025301680.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 46960 47526 . - . ID=gene-IY40_RS00440;Name=cybB;gbkey=Gene;gene=cybB;gene_biotype=protein_coding;locus_tag=IY40_RS00440 NZ_JPQY01000002.1 Protein Homology CDS 46960 47526 . - 0 ID=cds-WP_072008221.1;Parent=gene-IY40_RS00440;Dbxref=GenBank:WP_072008221.1;Name=WP_072008221.1;Ontology_term=GO:0022904,GO:0009055,GO:0016020;gbkey=CDS;gene=cybB;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA;go_process=respiratory electron transport chain|0022904||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010244777.1;locus_tag=IY40_RS00440;product=cytochrome b561;protein_id=WP_072008221.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 47795 49396 . - . ID=gene-IY40_RS00445;Name=IY40_RS00445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS00445;old_locus_tag=IY40_00455 NZ_JPQY01000002.1 Protein Homology CDS 47795 49396 . - 0 ID=cds-WP_025301682.1;Parent=gene-IY40_RS00445;Dbxref=GenBank:WP_025301682.1;Name=WP_025301682.1;Ontology_term=GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015376775.1;locus_tag=IY40_RS00445;product=ABC transporter substrate-binding protein;protein_id=WP_025301682.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 49571 50152 . + . ID=gene-IY40_RS00450;Name=IY40_RS00450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS00450;old_locus_tag=IY40_00460 NZ_JPQY01000002.1 Protein Homology CDS 49571 50152 . + 0 ID=cds-WP_043135548.1;Parent=gene-IY40_RS00450;Dbxref=GenBank:WP_043135548.1;Name=WP_043135548.1;Ontology_term=GO:0010181,GO:0016491;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004940648.1;locus_tag=IY40_RS00450;product=flavin reductase family protein;protein_id=WP_043135548.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 50149 50529 . - . ID=gene-IY40_RS00455;Name=IY40_RS00455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS00455;old_locus_tag=IY40_00465 NZ_JPQY01000002.1 Protein Homology CDS 50149 50529 . - 0 ID=cds-WP_025301684.1;Parent=gene-IY40_RS00455;Dbxref=GenBank:WP_025301684.1;Name=WP_025301684.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016928940.1;locus_tag=IY40_RS00455;product=winged helix-turn-helix transcriptional regulator;protein_id=WP_025301684.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 50614 51381 . + . ID=gene-IY40_RS00460;Name=IY40_RS00460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS00460;old_locus_tag=IY40_00470 NZ_JPQY01000002.1 Protein Homology CDS 50614 51381 . + 0 ID=cds-WP_043135549.1;Parent=gene-IY40_RS00460;Dbxref=GenBank:WP_043135549.1;Name=WP_043135549.1;Ontology_term=GO:0008753,GO:0009055,GO:0010181,GO:0050136;gbkey=CDS;go_function=NADPH dehydrogenase (quinone) activity|0008753||IEA,electron transfer activity|0009055||IEA,FMN binding|0010181||IEA,NADH dehydrogenase (quinone) (non-electrogenic) activity|0050136||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019454279.1;locus_tag=IY40_RS00460;product=NAD(P)H-dependent oxidoreductase;protein_id=WP_043135549.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 51378 51626 . - . ID=gene-IY40_RS00465;Name=IY40_RS00465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS00465;old_locus_tag=IY40_00475 NZ_JPQY01000002.1 Protein Homology CDS 51378 51626 . - 0 ID=cds-WP_019454278.1;Parent=gene-IY40_RS00465;Dbxref=GenBank:WP_019454278.1;Name=WP_019454278.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019454278.1;locus_tag=IY40_RS00465;product=hypothetical protein;protein_id=WP_019454278.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 51820 52224 . + . ID=gene-IY40_RS00470;Name=IY40_RS00470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS00470;old_locus_tag=IY40_00480 NZ_JPQY01000002.1 Protein Homology CDS 51820 52224 . + 0 ID=cds-WP_043135551.1;Parent=gene-IY40_RS00470;Dbxref=GenBank:WP_043135551.1;Name=WP_043135551.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019454277.1;locus_tag=IY40_RS00470;product=Exc2 family lipoprotein;protein_id=WP_043135551.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 52333 52974 . + . ID=gene-IY40_RS00475;Name=IY40_RS00475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS00475;old_locus_tag=IY40_00485 NZ_JPQY01000002.1 Protein Homology CDS 52333 52974 . + 0 ID=cds-WP_043135553.1;Parent=gene-IY40_RS00475;Dbxref=GenBank:WP_043135553.1;Name=WP_043135553.1;Ontology_term=GO:0015035;gbkey=CDS;go_function=protein-disulfide reductase activity|0015035||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015376779.1;locus_tag=IY40_RS00475;product=DsbA family protein;protein_id=WP_043135553.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 53010 53732 . - . ID=gene-IY40_RS00480;Name=IY40_RS00480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS00480;old_locus_tag=IY40_00490 NZ_JPQY01000002.1 Protein Homology CDS 53010 53732 . - 0 ID=cds-WP_043135555.1;Parent=gene-IY40_RS00480;Dbxref=GenBank:WP_043135555.1;Name=WP_043135555.1;Ontology_term=GO:0016311,GO:0003993;gbkey=CDS;go_function=acid phosphatase activity|0003993||IEA;go_process=dephosphorylation|0016311||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019454275.1;locus_tag=IY40_RS00480;product=acid phosphatase;protein_id=WP_043135555.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 53955 54854 . + . ID=gene-IY40_RS00485;Name=feaR;gbkey=Gene;gene=feaR;gene_biotype=protein_coding;locus_tag=IY40_RS00485;old_locus_tag=IY40_00495 NZ_JPQY01000002.1 Protein Homology CDS 53955 54854 . + 0 ID=cds-WP_043135557.1;Parent=gene-IY40_RS00485;Dbxref=GenBank:WP_043135557.1;Name=WP_043135557.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;gene=feaR;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016928935.1;locus_tag=IY40_RS00485;product=transcriptional regulator FeaR;protein_id=WP_043135557.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 54888 56387 . - . ID=gene-IY40_RS00490;Name=IY40_RS00490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS00490;old_locus_tag=IY40_00500 NZ_JPQY01000002.1 Protein Homology CDS 54888 56387 . - 0 ID=cds-WP_025301690.1;Parent=gene-IY40_RS00490;Dbxref=GenBank:WP_025301690.1;Name=WP_025301690.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415903.4;locus_tag=IY40_RS00490;product=aldehyde dehydrogenase family protein;protein_id=WP_025301690.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 56547 57185 . - . ID=gene-IY40_RS00495;Name=leuE;gbkey=Gene;gene=leuE;gene_biotype=protein_coding;locus_tag=IY40_RS00495;old_locus_tag=IY40_00505 NZ_JPQY01000002.1 Protein Homology CDS 56547 57185 . - 0 ID=cds-WP_004940625.1;Parent=gene-IY40_RS00495;Dbxref=GenBank:WP_004940625.1;Name=WP_004940625.1;Ontology_term=GO:0006865;gbkey=CDS;gene=leuE;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006321256.1;locus_tag=IY40_RS00495;product=leucine efflux protein LeuE;protein_id=WP_004940625.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 57423 58478 . + . ID=gene-IY40_RS00500;Name=ada;gbkey=Gene;gene=ada;gene_biotype=protein_coding;locus_tag=IY40_RS00500;old_locus_tag=IY40_00510 NZ_JPQY01000002.1 Protein Homology CDS 57423 58478 . + 0 ID=cds-WP_025301691.1;Parent=gene-IY40_RS00500;Dbxref=GenBank:WP_025301691.1;Name=WP_025301691.1;Ontology_term=GO:0006281,GO:0006355,GO:0003700;gbkey=CDS;gene=ada;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=DNA repair|0006281||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016928932.1;locus_tag=IY40_RS00500;product=bifunctional DNA-binding transcriptional regulator/O6-methylguanine-DNA methyltransferase Ada;protein_id=WP_025301691.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 58475 59188 . + . ID=gene-IY40_RS00505;Name=IY40_RS00505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS00505;old_locus_tag=IY40_00515 NZ_JPQY01000002.1 Protein Homology CDS 58475 59188 . + 0 ID=cds-WP_043135561.1;Parent=gene-IY40_RS00505;Dbxref=GenBank:WP_043135561.1;Name=WP_043135561.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004940618.1;locus_tag=IY40_RS00505;product=2OG-Fe(II) oxygenase;protein_id=WP_043135561.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 59183 60046 . - . ID=gene-IY40_RS00510;Name=tehB;gbkey=Gene;gene=tehB;gene_biotype=protein_coding;locus_tag=IY40_RS00510;old_locus_tag=IY40_00520 NZ_JPQY01000002.1 Protein Homology CDS 59183 60046 . - 0 ID=cds-WP_043135563.1;Parent=gene-IY40_RS00510;Dbxref=GenBank:WP_043135563.1;Name=WP_043135563.1;Ontology_term=GO:0046690,GO:0008757;gbkey=CDS;gene=tehB;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=response to tellurium ion|0046690||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004940615.1;locus_tag=IY40_RS00510;product=SAM-dependent methyltransferase TehB;protein_id=WP_043135563.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 60147 60605 . - . ID=gene-IY40_RS00515;Name=IY40_RS00515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS00515;old_locus_tag=IY40_00525 NZ_JPQY01000002.1 Protein Homology CDS 60147 60605 . - 0 ID=cds-WP_043135565.1;Parent=gene-IY40_RS00515;Dbxref=GenBank:WP_043135565.1;Name=WP_043135565.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006323844.1;locus_tag=IY40_RS00515;product=GNAT family N-acetyltransferase;protein_id=WP_043135565.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 60735 61838 . + . ID=gene-IY40_RS00520;Name=IY40_RS00520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS00520;old_locus_tag=IY40_00530 NZ_JPQY01000002.1 Protein Homology CDS 60735 61838 . + 0 ID=cds-WP_050505120.1;Parent=gene-IY40_RS00520;Dbxref=GenBank:WP_050505120.1;Name=WP_050505120.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004940610.1;locus_tag=IY40_RS00520;product=DUF1615 domain-containing protein;protein_id=WP_050505120.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 61891 63570 . - . ID=gene-IY40_RS00525;Name=IY40_RS00525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS00525;old_locus_tag=IY40_00535 NZ_JPQY01000002.1 Protein Homology CDS 61891 63570 . - 0 ID=cds-WP_043135568.1;Parent=gene-IY40_RS00525;Dbxref=GenBank:WP_043135568.1;Name=WP_043135568.1;Ontology_term=GO:0016831,GO:0030976,GO:0046872;gbkey=CDS;go_function=carboxy-lyase activity|0016831||IEA,thiamine pyrophosphate binding|0030976||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004940608.1;locus_tag=IY40_RS00525;product=alpha-keto acid decarboxylase family protein;protein_id=WP_043135568.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 64245 64673 . + . ID=gene-IY40_RS00530;Name=IY40_RS00530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS00530;old_locus_tag=IY40_00540 NZ_JPQY01000002.1 Protein Homology CDS 64245 64673 . + 0 ID=cds-WP_025301697.1;Parent=gene-IY40_RS00530;Dbxref=GenBank:WP_025301697.1;Name=WP_025301697.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019454264.1;locus_tag=IY40_RS00530;product=adenine nucleotide alpha hydrolase family protein;protein_id=WP_025301697.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 64882 65472 . + . ID=gene-IY40_RS00535;Name=pagP;gbkey=Gene;gene=pagP;gene_biotype=protein_coding;locus_tag=IY40_RS00535;old_locus_tag=IY40_00545 NZ_JPQY01000002.1 Protein Homology CDS 64882 65472 . + 0 ID=cds-WP_025301698.1;Parent=gene-IY40_RS00535;Dbxref=GenBank:WP_025301698.1;Name=WP_025301698.1;gbkey=CDS;gene=pagP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013811669.1;locus_tag=IY40_RS00535;product=lipid IV(A) palmitoyltransferase PagP;protein_id=WP_025301698.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 65599 66087 . + . ID=gene-IY40_RS00540;Name=IY40_RS00540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS00540;old_locus_tag=IY40_00550 NZ_JPQY01000002.1 Protein Homology CDS 65599 66087 . + 0 ID=cds-WP_043135570.1;Parent=gene-IY40_RS00540;Dbxref=GenBank:WP_043135570.1;Name=WP_043135570.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004949137.1;locus_tag=IY40_RS00540;product=DUF2501 domain-containing protein;protein_id=WP_043135570.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 66138 66401 . + . ID=gene-IY40_RS00545;Name=IY40_RS00545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS00545;old_locus_tag=IY40_00555 NZ_JPQY01000002.1 Protein Homology CDS 66138 66401 . + 0 ID=cds-WP_043135572.1;Parent=gene-IY40_RS00545;Dbxref=GenBank:WP_043135572.1;Name=WP_043135572.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012005436.1;locus_tag=IY40_RS00545;product=putative hemolysin;protein_id=WP_043135572.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 66439 67056 . - . ID=gene-IY40_RS00550;Name=IY40_RS00550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS00550;old_locus_tag=IY40_00560 NZ_JPQY01000002.1 Protein Homology CDS 66439 67056 . - 0 ID=cds-WP_025301700.1;Parent=gene-IY40_RS00550;Dbxref=GenBank:WP_025301700.1;Name=WP_025301700.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015376791.1;locus_tag=IY40_RS00550;product=hypothetical protein;protein_id=WP_025301700.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 67163 67852 . - . ID=gene-IY40_RS00555;Name=IY40_RS00555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS00555;old_locus_tag=IY40_00565 NZ_JPQY01000002.1 Protein Homology CDS 67163 67852 . - 0 ID=cds-WP_043135573.1;Parent=gene-IY40_RS00555;Dbxref=GenBank:WP_043135573.1;Name=WP_043135573.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019454259.1;locus_tag=IY40_RS00555;product=ZIP family metal transporter;protein_id=WP_043135573.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 67991 68773 . + . ID=gene-IY40_RS00560;Name=IY40_RS00560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS00560;old_locus_tag=IY40_00570 NZ_JPQY01000002.1 Protein Homology CDS 67991 68773 . + 0 ID=cds-WP_043135576.1;Parent=gene-IY40_RS00560;Dbxref=GenBank:WP_043135576.1;Name=WP_043135576.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004949141.1;locus_tag=IY40_RS00560;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_043135576.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 68776 69159 . + . ID=gene-IY40_RS00565;Name=IY40_RS00565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS00565;old_locus_tag=IY40_00575 NZ_JPQY01000002.1 Protein Homology CDS 68776 69159 . + 0 ID=cds-WP_025301702.1;Parent=gene-IY40_RS00565;Dbxref=GenBank:WP_025301702.1;Name=WP_025301702.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013811674.1;locus_tag=IY40_RS00565;product=VOC family protein;protein_id=WP_025301702.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 69160 70068 . - . ID=gene-IY40_RS00570;Name=IY40_RS00570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS00570;old_locus_tag=IY40_00580 NZ_JPQY01000002.1 Protein Homology CDS 69160 70068 . - 0 ID=cds-WP_043135578.1;Parent=gene-IY40_RS00570;Dbxref=GenBank:WP_043135578.1;Name=WP_043135578.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013811675.1;locus_tag=IY40_RS00570;product=LysR family transcriptional regulator;protein_id=WP_043135578.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 70194 71075 . + . ID=gene-IY40_RS00575;Name=IY40_RS00575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS00575;old_locus_tag=IY40_00585 NZ_JPQY01000002.1 Protein Homology CDS 70194 71075 . + 0 ID=cds-WP_016928920.1;Parent=gene-IY40_RS00575;Dbxref=GenBank:WP_016928920.1;Name=WP_016928920.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015376795.1;locus_tag=IY40_RS00575;product=pirin family protein;protein_id=WP_016928920.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 71192 71818 . + . ID=gene-IY40_RS00580;Name=ycaC;gbkey=Gene;gene=ycaC;gene_biotype=protein_coding;locus_tag=IY40_RS00580;old_locus_tag=IY40_00590 NZ_JPQY01000002.1 Protein Homology CDS 71192 71818 . + 0 ID=cds-WP_025301704.1;Parent=gene-IY40_RS00580;Dbxref=GenBank:WP_025301704.1;Name=WP_025301704.1;Ontology_term=GO:0016787;gbkey=CDS;gene=ycaC;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309009.1;locus_tag=IY40_RS00580;product=isochorismate family cysteine hydrolase YcaC;protein_id=WP_025301704.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 72131 73306 . + . ID=gene-IY40_RS00585;Name=IY40_RS00585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS00585;old_locus_tag=IY40_00595 NZ_JPQY01000002.1 Protein Homology CDS 72131 73306 . + 0 ID=cds-WP_043135580.1;Parent=gene-IY40_RS00585;Dbxref=GenBank:WP_043135580.1;Name=WP_043135580.1;Ontology_term=GO:0006304,GO:0003677,GO:0004519;gbkey=CDS;go_function=DNA binding|0003677||IEA,endonuclease activity|0004519||IEA;go_process=DNA modification|0006304||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016928919.1;locus_tag=IY40_RS00585;product=type I restriction endonuclease;protein_id=WP_043135580.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 73546 73875 . + . ID=gene-IY40_RS00590;Name=IY40_RS00590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS00590;old_locus_tag=IY40_00600 NZ_JPQY01000002.1 Protein Homology CDS 73546 73875 . + 0 ID=cds-WP_043135582.1;Parent=gene-IY40_RS00590;Dbxref=GenBank:WP_043135582.1;Name=WP_043135582.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019454254.1;locus_tag=IY40_RS00590;product=hypothetical protein;protein_id=WP_043135582.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 73951 74403 . + . ID=gene-IY40_RS00595;Name=IY40_RS00595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS00595;old_locus_tag=IY40_00605 NZ_JPQY01000002.1 Protein Homology CDS 73951 74403 . + 0 ID=cds-WP_025301706.1;Parent=gene-IY40_RS00595;Dbxref=GenBank:WP_025301706.1;Name=WP_025301706.1;Ontology_term=GO:0015035;gbkey=CDS;go_function=protein-disulfide reductase activity|0015035||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019454253.1;locus_tag=IY40_RS00595;product=thiol-disulfide oxidoreductase DCC family protein;protein_id=WP_025301706.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 74490 74741 . + . ID=gene-IY40_RS00600;Name=IY40_RS00600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS00600;old_locus_tag=IY40_00610 NZ_JPQY01000002.1 Protein Homology CDS 74490 74741 . + 0 ID=cds-WP_025301707.1;Parent=gene-IY40_RS00600;Dbxref=GenBank:WP_025301707.1;Name=WP_025301707.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019454252.1;locus_tag=IY40_RS00600;product=hypothetical protein;protein_id=WP_025301707.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 74732 75280 . - . ID=gene-IY40_RS00605;Name=IY40_RS00605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS00605;old_locus_tag=IY40_00615 NZ_JPQY01000002.1 Protein Homology CDS 74732 75280 . - 0 ID=cds-WP_043135584.1;Parent=gene-IY40_RS00605;Dbxref=GenBank:WP_043135584.1;Name=WP_043135584.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015376798.1;locus_tag=IY40_RS00605;product=GNAT family N-acetyltransferase;protein_id=WP_043135584.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 75375 76106 . - . ID=gene-IY40_RS00610;Name=IY40_RS00610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS00610;old_locus_tag=IY40_00620 NZ_JPQY01000002.1 Protein Homology CDS 75375 76106 . - 0 ID=cds-WP_025301709.1;Parent=gene-IY40_RS00610;Dbxref=GenBank:WP_025301709.1;Name=WP_025301709.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013811682.1;locus_tag=IY40_RS00610;product=DUF2076 domain-containing protein;protein_id=WP_025301709.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 76214 77017 . - . ID=gene-IY40_RS00615;Name=IY40_RS00615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS00615;old_locus_tag=IY40_00625 NZ_JPQY01000002.1 Protein Homology CDS 76214 77017 . - 0 ID=cds-WP_025301710.1;Parent=gene-IY40_RS00615;Dbxref=GenBank:WP_025301710.1;Name=WP_025301710.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004928458.1;locus_tag=IY40_RS00615;product=helix-turn-helix transcriptional regulator;protein_id=WP_025301710.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 77136 77906 . + . ID=gene-IY40_RS00620;Name=IY40_RS00620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS00620;old_locus_tag=IY40_00630 NZ_JPQY01000002.1 Protein Homology CDS 77136 77906 . + 0 ID=cds-WP_025301711.1;Parent=gene-IY40_RS00620;Dbxref=GenBank:WP_025301711.1;Name=WP_025301711.1;Ontology_term=GO:0008168,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016928913.1;locus_tag=IY40_RS00620;product=class I SAM-dependent methyltransferase;protein_id=WP_025301711.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 77964 78659 . - . ID=gene-IY40_RS00625;Name=aqpZ;gbkey=Gene;gene=aqpZ;gene_biotype=protein_coding;locus_tag=IY40_RS00625;old_locus_tag=IY40_00635 NZ_JPQY01000002.1 Protein Homology CDS 77964 78659 . - 0 ID=cds-WP_025301712.1;Parent=gene-IY40_RS00625;Dbxref=GenBank:WP_025301712.1;Name=WP_025301712.1;Ontology_term=GO:0006833,GO:0015250;gbkey=CDS;gene=aqpZ;go_function=water channel activity|0015250||IEA;go_process=water transport|0006833||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004940529.1;locus_tag=IY40_RS00625;product=aquaporin Z;protein_id=WP_025301712.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 79086 80447 . + . ID=gene-IY40_RS00630;Name=IY40_RS00630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS00630;old_locus_tag=IY40_00640 NZ_JPQY01000002.1 Protein Homology CDS 79086 80447 . + 0 ID=cds-WP_043135586.1;Parent=gene-IY40_RS00630;Dbxref=GenBank:WP_043135586.1;Name=WP_043135586.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006321230.1;locus_tag=IY40_RS00630;product=esterase-like activity of phytase family protein;protein_id=WP_043135586.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 80648 81823 . - . ID=gene-IY40_RS00635;Name=IY40_RS00635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS00635;old_locus_tag=IY40_00645 NZ_JPQY01000002.1 Protein Homology CDS 80648 81823 . - 0 ID=cds-WP_043135588.1;Parent=gene-IY40_RS00635;Dbxref=GenBank:WP_043135588.1;Name=WP_043135588.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016928910.1;locus_tag=IY40_RS00635;product=low temperature requirement protein A;protein_id=WP_043135588.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 82133 82417 . + . ID=gene-IY40_RS00640;Name=IY40_RS00640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS00640;old_locus_tag=IY40_00650 NZ_JPQY01000002.1 Protein Homology CDS 82133 82417 . + 0 ID=cds-WP_004940519.1;Parent=gene-IY40_RS00640;Dbxref=GenBank:WP_004940519.1;Name=WP_004940519.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013811688.1;locus_tag=IY40_RS00640;product=YdgH/BhsA/McbA-like domain containing protein;protein_id=WP_004940519.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 82658 83215 . + . ID=gene-IY40_RS00645;Name=IY40_RS00645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS00645;old_locus_tag=IY40_00655 NZ_JPQY01000002.1 Protein Homology CDS 82658 83215 . + 0 ID=cds-WP_025301715.1;Parent=gene-IY40_RS00645;Dbxref=GenBank:WP_025301715.1;Name=WP_025301715.1;Ontology_term=GO:0032259,GO:0008168,GO:0008757,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015376804.1;locus_tag=IY40_RS00645;product=class I SAM-dependent methyltransferase;protein_id=WP_025301715.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 83216 83677 . - . ID=gene-IY40_RS00650;Name=IY40_RS00650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS00650;old_locus_tag=IY40_00660 NZ_JPQY01000002.1 Protein Homology CDS 83216 83677 . - 0 ID=cds-WP_043135591.1;Parent=gene-IY40_RS00650;Dbxref=GenBank:WP_043135591.1;Name=WP_043135591.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016928908.1;locus_tag=IY40_RS00650;product=GNAT family N-acetyltransferase;protein_id=WP_043135591.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 83895 85010 . + . ID=gene-IY40_RS00655;Name=IY40_RS00655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS00655;old_locus_tag=IY40_00665 NZ_JPQY01000002.1 Protein Homology CDS 83895 85010 . + 0 ID=cds-WP_043135593.1;Parent=gene-IY40_RS00655;Dbxref=GenBank:WP_043135593.1;Name=WP_043135593.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013811691.1;locus_tag=IY40_RS00655;product=ABC transporter substrate-binding protein;protein_id=WP_043135593.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 85003 87126 . + . ID=gene-IY40_RS00660;Name=IY40_RS00660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS00660;old_locus_tag=IY40_00670 NZ_JPQY01000002.1 Protein Homology CDS 85003 87126 . + 0 ID=cds-WP_043135595.1;Parent=gene-IY40_RS00660;Dbxref=GenBank:WP_043135595.1;Name=WP_043135595.1;Ontology_term=GO:0015891,GO:0055085,GO:0015267,GO:0046872,GO:0009279,GO:0016020;gbkey=CDS;go_component=cell outer membrane|0009279||IEA,membrane|0016020||IEA;go_function=channel activity|0015267||IEA,metal ion binding|0046872||IEA;go_process=siderophore transport|0015891||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012005457.1;locus_tag=IY40_RS00660;product=TonB-dependent siderophore receptor;protein_id=WP_043135595.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 87180 87698 . + . ID=gene-IY40_RS00665;Name=IY40_RS00665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS00665;old_locus_tag=IY40_00675 NZ_JPQY01000002.1 Protein Homology CDS 87180 87698 . + 0 ID=cds-WP_043135598.1;Parent=gene-IY40_RS00665;Dbxref=GenBank:WP_043135598.1;Name=WP_043135598.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004940503.1;locus_tag=IY40_RS00665;product=GNAT family N-acetyltransferase;protein_id=WP_043135598.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 87808 88332 . + . ID=gene-IY40_RS00670;Name=aroL;gbkey=Gene;gene=aroL;gene_biotype=protein_coding;locus_tag=IY40_RS00670;old_locus_tag=IY40_00680 NZ_JPQY01000002.1 Protein Homology CDS 87808 88332 . + 0 ID=cds-WP_025301720.1;Parent=gene-IY40_RS00670;Dbxref=GenBank:WP_025301720.1;Name=WP_025301720.1;Ontology_term=GO:0009073,GO:0004765;gbkey=CDS;gene=aroL;go_function=shikimate kinase activity|0004765||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208693.1;locus_tag=IY40_RS00670;product=shikimate kinase AroL;protein_id=WP_025301720.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 88369 89112 . - . ID=gene-IY40_RS00675;Name=IY40_RS00675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS00675;old_locus_tag=IY40_00685 NZ_JPQY01000002.1 Protein Homology CDS 88369 89112 . - 0 ID=cds-WP_043135599.1;Parent=gene-IY40_RS00675;Dbxref=GenBank:WP_043135599.1;Name=WP_043135599.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015376808.1;locus_tag=IY40_RS00675;product=helix-turn-helix domain-containing protein;protein_id=WP_043135599.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 89209 89613 . + . ID=gene-IY40_RS00680;Name=IY40_RS00680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS00680;old_locus_tag=IY40_00690 NZ_JPQY01000002.1 Protein Homology CDS 89209 89613 . + 0 ID=cds-WP_043135601.1;Parent=gene-IY40_RS00680;Dbxref=GenBank:WP_043135601.1;Name=WP_043135601.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004940493.1;locus_tag=IY40_RS00680;product=nuclear transport factor 2 family protein;protein_id=WP_043135601.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 89661 89861 . + . ID=gene-IY40_RS00685;Name=IY40_RS00685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS00685;old_locus_tag=IY40_00695 NZ_JPQY01000002.1 Protein Homology CDS 89661 89861 . + 0 ID=cds-WP_004940491.1;Parent=gene-IY40_RS00685;Dbxref=GenBank:WP_004940491.1;Name=WP_004940491.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013811697.1;locus_tag=IY40_RS00685;product=YaiA family protein;protein_id=WP_004940491.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 90008 90508 . + . ID=gene-IY40_RS00690;Name=IY40_RS00690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS00690;old_locus_tag=IY40_00700 NZ_JPQY01000002.1 Protein Homology CDS 90008 90508 . + 0 ID=cds-WP_025301723.1;Parent=gene-IY40_RS00690;Dbxref=GenBank:WP_025301723.1;Name=WP_025301723.1;Ontology_term=GO:0006352,GO:0003677,GO:0016987;gbkey=CDS;go_function=DNA binding|0003677||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004940490.1;locus_tag=IY40_RS00690;product=RNA polymerase sigma factor;protein_id=WP_025301723.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 90585 91538 . + . ID=gene-IY40_RS00695;Name=IY40_RS00695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS00695;old_locus_tag=IY40_00705 NZ_JPQY01000002.1 Protein Homology CDS 90585 91538 . + 0 ID=cds-WP_043135603.1;Parent=gene-IY40_RS00695;Dbxref=GenBank:WP_043135603.1;Name=WP_043135603.1;Ontology_term=GO:0006811,GO:0004888,GO:0016989;gbkey=CDS;go_function=transmembrane signaling receptor activity|0004888||IEA,sigma factor antagonist activity|0016989||IEA;go_process=monoatomic ion transport|0006811||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016928900.1;locus_tag=IY40_RS00695;product=FecR family protein;protein_id=WP_043135603.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 91696 94395 . + . ID=gene-IY40_RS00700;Name=IY40_RS00700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS00700;old_locus_tag=IY40_00710 NZ_JPQY01000002.1 Protein Homology CDS 91696 94395 . + 0 ID=cds-WP_043135605.1;Parent=gene-IY40_RS00700;Dbxref=GenBank:WP_043135605.1;Name=WP_043135605.1;Ontology_term=GO:0055085,GO:0022857,GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004940484.1;locus_tag=IY40_RS00700;product=TonB-dependent receptor;protein_id=WP_043135605.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 94474 95040 . + . ID=gene-IY40_RS00705;Name=IY40_RS00705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS00705;old_locus_tag=IY40_00715 NZ_JPQY01000002.1 Protein Homology CDS 94474 95040 . + 0 ID=cds-WP_033642038.1;Parent=gene-IY40_RS00705;Dbxref=GenBank:WP_033642038.1;Name=WP_033642038.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004940479.1;locus_tag=IY40_RS00705;product=heme acquisition protein HasA;protein_id=WP_033642038.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 95113 96891 . + . ID=gene-IY40_RS00710;Name=IY40_RS00710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS00710;old_locus_tag=IY40_00720 NZ_JPQY01000002.1 Protein Homology CDS 95113 96891 . + 0 ID=cds-WP_043135608.1;Parent=gene-IY40_RS00710;Dbxref=GenBank:WP_043135608.1;Name=WP_043135608.1;Ontology_term=GO:0030253,GO:0005524,GO:0016887,GO:0034040,GO:0140359,GO:0030256;gbkey=CDS;go_component=type I protein secretion system complex|0030256||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled lipid transmembrane transporter activity|0034040||IEA,ABC-type transporter activity|0140359||IEA;go_process=protein secretion by the type I secretion system|0030253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004940477.1;locus_tag=IY40_RS00710;product=type I secretion system permease/ATPase;protein_id=WP_043135608.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 96888 98219 . + . ID=gene-IY40_RS00715;Name=IY40_RS00715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS00715;old_locus_tag=IY40_00725 NZ_JPQY01000002.1 Protein Homology CDS 96888 98219 . + 0 ID=cds-WP_025301728.1;Parent=gene-IY40_RS00715;Dbxref=GenBank:WP_025301728.1;Name=WP_025301728.1;Ontology_term=GO:0015031,GO:0030253,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=protein transport|0015031||IEA,protein secretion by the type I secretion system|0030253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015376814.1;locus_tag=IY40_RS00715;product=HlyD family type I secretion periplasmic adaptor subunit;protein_id=WP_025301728.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 98222 99013 . + . ID=gene-IY40_RS00720;Name=IY40_RS00720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS00720;old_locus_tag=IY40_00730 NZ_JPQY01000002.1 Protein Homology CDS 98222 99013 . + 0 ID=cds-WP_043135609.1;Parent=gene-IY40_RS00720;Dbxref=GenBank:WP_043135609.1;Name=WP_043135609.1;Ontology_term=GO:0015031,GO:0015891,GO:0055085,GO:0031992,GO:0030288;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=energy transducer activity|0031992||IEA;go_process=protein transport|0015031||IEA,siderophore transport|0015891||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015376815.1;locus_tag=IY40_RS00720;product=energy transducer TonB;protein_id=WP_043135609.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 99267 100040 . + . ID=gene-IY40_RS00725;Name=IY40_RS00725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS00725;old_locus_tag=IY40_00735 NZ_JPQY01000002.1 Protein Homology CDS 99267 100040 . + 0 ID=cds-WP_043135612.1;Parent=gene-IY40_RS00725;Dbxref=GenBank:WP_043135612.1;Name=WP_043135612.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015376816.1;locus_tag=IY40_RS00725;product=IclR family transcriptional regulator;protein_id=WP_043135612.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 100260 101816 . + . ID=gene-IY40_RS00730;Name=IY40_RS00730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS00730;old_locus_tag=IY40_00740 NZ_JPQY01000002.1 Protein Homology CDS 100260 101816 . + 0 ID=cds-WP_043135614.1;Parent=gene-IY40_RS00730;Dbxref=GenBank:WP_043135614.1;Name=WP_043135614.1;Ontology_term=GO:0055085,GO:0035673;gbkey=CDS;go_function=oligopeptide transmembrane transporter activity|0035673||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004940470.1;locus_tag=IY40_RS00730;product=OPT/YSL family transporter;protein_id=WP_043135614.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 101851 102780 . + . ID=gene-IY40_RS00735;Name=IY40_RS00735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS00735;old_locus_tag=IY40_00745 NZ_JPQY01000002.1 Protein Homology CDS 101851 102780 . + 0 ID=cds-WP_043135616.1;Parent=gene-IY40_RS00735;Dbxref=GenBank:WP_043135616.1;Name=WP_043135616.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015698363.1;locus_tag=IY40_RS00735;product=DUF1177 domain-containing protein;protein_id=WP_043135616.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 102785 103462 . + . ID=gene-IY40_RS00740;Name=IY40_RS00740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS00740;old_locus_tag=IY40_00750 NZ_JPQY01000002.1 Protein Homology CDS 102785 103462 . + 0 ID=cds-WP_043135618.1;Parent=gene-IY40_RS00740;Dbxref=GenBank:WP_043135618.1;Name=WP_043135618.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004940465.1;locus_tag=IY40_RS00740;product=AroM family protein;protein_id=WP_043135618.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 103674 103964 . + . ID=gene-IY40_RS00745;Name=ppnP;gbkey=Gene;gene=ppnP;gene_biotype=protein_coding;locus_tag=IY40_RS00745;old_locus_tag=IY40_00755 NZ_JPQY01000002.1 Protein Homology CDS 103674 103964 . + 0 ID=cds-WP_004940463.1;Parent=gene-IY40_RS00745;Dbxref=GenBank:WP_004940463.1;Name=WP_004940463.1;gbkey=CDS;gene=ppnP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012005467.1;locus_tag=IY40_RS00745;product=pyrimidine/purine nucleoside phosphorylase;protein_id=WP_004940463.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 104030 104941 . - . ID=gene-IY40_RS00750;Name=rdgC;gbkey=Gene;gene=rdgC;gene_biotype=protein_coding;locus_tag=IY40_RS00750;old_locus_tag=IY40_00760 NZ_JPQY01000002.1 Protein Homology CDS 104030 104941 . - 0 ID=cds-WP_004940461.1;Parent=gene-IY40_RS00750;Dbxref=GenBank:WP_004940461.1;Name=WP_004940461.1;Ontology_term=GO:0006310;gbkey=CDS;gene=rdgC;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004873494.1;locus_tag=IY40_RS00750;product=recombination-associated protein RdgC;protein_id=WP_004940461.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 105158 106072 . + . ID=gene-IY40_RS00755;Name=mak;gbkey=Gene;gene=mak;gene_biotype=protein_coding;locus_tag=IY40_RS00755;old_locus_tag=IY40_00765 NZ_JPQY01000002.1 Protein Homology CDS 105158 106072 . + 0 ID=cds-WP_043135620.1;Parent=gene-IY40_RS00755;Dbxref=GenBank:WP_043135620.1;Name=WP_043135620.1;gbkey=CDS;gene=mak;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004940458.1;locus_tag=IY40_RS00755;product=fructokinase;protein_id=WP_043135620.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 106175 106408 . + . ID=gene-IY40_RS00760;Name=IY40_RS00760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS00760;old_locus_tag=IY40_00770 NZ_JPQY01000002.1 Protein Homology CDS 106175 106408 . + 0 ID=cds-WP_025301735.1;Parent=gene-IY40_RS00760;Dbxref=GenBank:WP_025301735.1;Name=WP_025301735.1;Ontology_term=GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004940455.1;locus_tag=IY40_RS00760;product=type II toxin-antitoxin system Phd/YefM family antitoxin;protein_id=WP_025301735.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 106405 106791 . + . ID=gene-IY40_RS00765;Name=IY40_RS00765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS00765;old_locus_tag=IY40_00775 NZ_JPQY01000002.1 Protein Homology CDS 106405 106791 . + 0 ID=cds-WP_025301736.1;Parent=gene-IY40_RS00765;Dbxref=GenBank:WP_025301736.1;Name=WP_025301736.1;Ontology_term=GO:0004540,GO:0090729,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=RNA nuclease activity|0004540||IEA,toxin activity|0090729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016928892.1;locus_tag=IY40_RS00765;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_025301736.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 106788 107636 . - . ID=gene-IY40_RS00770;Name=licT;gbkey=Gene;gene=licT;gene_biotype=protein_coding;locus_tag=IY40_RS00770;old_locus_tag=IY40_00780 NZ_JPQY01000002.1 Protein Homology CDS 106788 107636 . - 0 ID=cds-WP_043135622.1;Parent=gene-IY40_RS00770;Dbxref=GenBank:WP_043135622.1;Name=WP_043135622.1;Ontology_term=GO:0006355,GO:0003723;gbkey=CDS;gene=licT;go_function=RNA binding|0003723||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016928891.1;locus_tag=IY40_RS00770;product=BglG family transcription antiterminator LicT;protein_id=WP_043135622.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 107869 111120 . - . ID=gene-IY40_RS00775;Name=sbcC;gbkey=Gene;gene=sbcC;gene_biotype=protein_coding;locus_tag=IY40_RS00775;old_locus_tag=IY40_00785 NZ_JPQY01000002.1 Protein Homology CDS 107869 111120 . - 0 ID=cds-WP_043135623.1;Parent=gene-IY40_RS00775;Dbxref=GenBank:WP_043135623.1;Name=WP_043135623.1;Ontology_term=GO:0006260,GO:0004527;gbkey=CDS;gene=sbcC;go_function=exonuclease activity|0004527||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004940444.1;locus_tag=IY40_RS00775;product=exonuclease subunit SbcC;protein_id=WP_043135623.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 111117 112349 . - . ID=gene-IY40_RS00780;Name=sbcD;gbkey=Gene;gene=sbcD;gene_biotype=protein_coding;locus_tag=IY40_RS00780;old_locus_tag=IY40_00790 NZ_JPQY01000002.1 Protein Homology CDS 111117 112349 . - 0 ID=cds-WP_025301739.1;Parent=gene-IY40_RS00780;Dbxref=GenBank:WP_025301739.1;Name=WP_025301739.1;Ontology_term=GO:0006260,GO:0006310,GO:0004527;gbkey=CDS;gene=sbcD;go_function=exonuclease activity|0004527||IEA;go_process=DNA replication|0006260||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015376823.1;locus_tag=IY40_RS00780;product=exonuclease subunit SbcD;protein_id=WP_025301739.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 112565 113254 . + . ID=gene-IY40_RS00785;Name=phoB;gbkey=Gene;gene=phoB;gene_biotype=protein_coding;locus_tag=IY40_RS00785;old_locus_tag=IY40_00795 NZ_JPQY01000002.1 Protein Homology CDS 112565 113254 . + 0 ID=cds-WP_004940438.1;Parent=gene-IY40_RS00785;Dbxref=GenBank:WP_004940438.1;Name=WP_004940438.1;gbkey=CDS;gene=phoB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000113934.1;locus_tag=IY40_RS00785;product=phosphate response regulator transcription factor PhoB;protein_id=WP_004940438.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 113279 114595 . + . ID=gene-IY40_RS00790;Name=phoR;gbkey=Gene;gene=phoR;gene_biotype=protein_coding;locus_tag=IY40_RS00790;old_locus_tag=IY40_00800 NZ_JPQY01000002.1 Protein Homology CDS 113279 114595 . + 0 ID=cds-WP_043135624.1;Parent=gene-IY40_RS00790;Dbxref=GenBank:WP_043135624.1;Name=WP_043135624.1;Ontology_term=GO:0000160,GO:0006355,GO:0016310,GO:0000155,GO:0004721,GO:0016020;gbkey=CDS;gene=phoR;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,phosphoprotein phosphatase activity|0004721||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019082524.1;locus_tag=IY40_RS00790;product=phosphate regulon sensor histidine kinase PhoR;protein_id=WP_043135624.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 114610 115572 . + . ID=gene-IY40_RS00795;Name=IY40_RS00795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS00795;old_locus_tag=IY40_00805 NZ_JPQY01000002.1 Protein Homology CDS 114610 115572 . + 0 ID=cds-WP_025301741.1;Parent=gene-IY40_RS00795;Dbxref=GenBank:WP_025301741.1;Name=WP_025301741.1;Ontology_term=GO:0006817,GO:0022857,GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=transmembrane transporter activity|0022857||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=phosphate ion transport|0006817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004940432.1;locus_tag=IY40_RS00795;product=PstS family phosphate ABC transporter substrate-binding protein;protein_id=WP_025301741.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 116057 117373 . + . ID=gene-IY40_RS00800;Name=brnQ;gbkey=Gene;gene=brnQ;gene_biotype=protein_coding;locus_tag=IY40_RS00800;old_locus_tag=IY40_00810 NZ_JPQY01000002.1 Protein Homology CDS 116057 117373 . + 0 ID=cds-WP_025301742.1;Parent=gene-IY40_RS00800;Dbxref=GenBank:WP_025301742.1;Name=WP_025301742.1;Ontology_term=GO:0015803,GO:0015658,GO:0016020;gbkey=CDS;gene=brnQ;go_component=membrane|0016020||IEA;go_function=branched-chain amino acid transmembrane transporter activity|0015658||IEA;go_process=branched-chain amino acid transport|0015803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015376824.1;locus_tag=IY40_RS00800;product=branched-chain amino acid transport system II carrier protein;protein_id=WP_025301742.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 117447 118853 . + . ID=gene-IY40_RS00805;Name=proY;gbkey=Gene;gene=proY;gene_biotype=protein_coding;locus_tag=IY40_RS00805;old_locus_tag=IY40_00815 NZ_JPQY01000002.1 Protein Homology CDS 117447 118853 . + 0 ID=cds-WP_025301743.1;Parent=gene-IY40_RS00805;Dbxref=GenBank:WP_025301743.1;Name=WP_025301743.1;Ontology_term=GO:0006865,GO:0055085,GO:0016020;gbkey=CDS;gene=proY;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013811718.1;locus_tag=IY40_RS00805;product=proline-specific permease ProY;protein_id=WP_025301743.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 118886 119149 . - . ID=gene-IY40_RS00810;Name=IY40_RS00810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS00810;old_locus_tag=IY40_00820 NZ_JPQY01000002.1 Protein Homology CDS 118886 119149 . - 0 ID=cds-WP_025301744.1;Parent=gene-IY40_RS00810;Dbxref=GenBank:WP_025301744.1;Name=WP_025301744.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013811719.1;locus_tag=IY40_RS00810;product=hypothetical protein;protein_id=WP_025301744.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 119282 120538 . - . ID=gene-IY40_RS00815;Name=IY40_RS00815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS00815;old_locus_tag=IY40_00825 NZ_JPQY01000002.1 Protein Homology CDS 119282 120538 . - 0 ID=cds-WP_025301745.1;Parent=gene-IY40_RS00815;Dbxref=GenBank:WP_025301745.1;Name=WP_025301745.1;Ontology_term=GO:0055085,GO:0008381,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=mechanosensitive monoatomic ion channel activity|0008381||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004940416.1;locus_tag=IY40_RS00815;product=mechanosensitive ion channel family protein;protein_id=WP_025301745.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 120786 122609 . + . ID=gene-IY40_RS00820;Name=malZ;gbkey=Gene;gene=malZ;gene_biotype=protein_coding;locus_tag=IY40_RS00820;old_locus_tag=IY40_00830 NZ_JPQY01000002.1 Protein Homology CDS 120786 122609 . + 0 ID=cds-WP_043135626.1;Parent=gene-IY40_RS00820;Dbxref=GenBank:WP_043135626.1;Name=WP_043135626.1;Ontology_term=GO:0005975,GO:0004558;gbkey=CDS;gene=malZ;go_function=alpha-1%2C4-glucosidase activity|0004558||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016928881.1;locus_tag=IY40_RS00820;product=maltodextrin glucosidase;protein_id=WP_043135626.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 122663 124426 . - . ID=gene-IY40_RS00825;Name=ggt;gbkey=Gene;gene=ggt;gene_biotype=protein_coding;locus_tag=IY40_RS00825;old_locus_tag=IY40_00835 NZ_JPQY01000002.1 Protein Homology CDS 122663 124426 . - 0 ID=cds-WP_043135628.1;Parent=gene-IY40_RS00825;Dbxref=GenBank:WP_043135628.1;Name=WP_043135628.1;Ontology_term=GO:0006750,GO:0006751,GO:0036374;gbkey=CDS;gene=ggt;go_function=glutathione hydrolase activity|0036374||IEA;go_process=glutathione biosynthetic process|0006750||IEA,glutathione catabolic process|0006751||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013811722.1;locus_tag=IY40_RS00825;product=gamma-glutamyltransferase;protein_id=WP_043135628.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 124661 125263 . - . ID=gene-IY40_RS00830;Name=IY40_RS00830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS00830;old_locus_tag=IY40_00840 NZ_JPQY01000002.1 Protein Homology CDS 124661 125263 . - 0 ID=cds-WP_004940403.1;Parent=gene-IY40_RS00830;Dbxref=GenBank:WP_004940403.1;Name=WP_004940403.1;Ontology_term=GO:0051920;gbkey=CDS;go_function=peroxiredoxin activity|0051920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005160596.1;locus_tag=IY40_RS00830;product=peroxiredoxin C;protein_id=WP_004940403.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 125493 126074 . - . ID=gene-IY40_RS00835;Name=IY40_RS00835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS00835;old_locus_tag=IY40_00845 NZ_JPQY01000002.1 Protein Homology CDS 125493 126074 . - 0 ID=cds-WP_025301748.1;Parent=gene-IY40_RS00835;Dbxref=GenBank:WP_025301748.1;Name=WP_025301748.1;Ontology_term=GO:0006633,GO:0008770;gbkey=CDS;go_function=[acyl-carrier-protein] phosphodiesterase activity|0008770||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004940396.1;locus_tag=IY40_RS00835;product=ACP phosphodiesterase;protein_id=WP_025301748.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 126195 127265 . + . ID=gene-IY40_RS00840;Name=queA;gbkey=Gene;gene=queA;gene_biotype=protein_coding;locus_tag=IY40_RS00840;old_locus_tag=IY40_00850 NZ_JPQY01000002.1 Protein Homology CDS 126195 127265 . + 0 ID=cds-WP_033651079.1;Parent=gene-IY40_RS00840;Dbxref=GenBank:WP_033651079.1;Name=WP_033651079.1;Ontology_term=GO:0006400,GO:0008616,GO:0051075,GO:0005737;gbkey=CDS;gene=queA;go_component=cytoplasm|0005737||IEA;go_function=S-adenosylmethionine:tRNA ribosyltransferase-isomerase activity|0051075||IEA;go_process=tRNA modification|0006400||IEA,tRNA queuosine(34) biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016928878.1;locus_tag=IY40_RS00840;product=tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA;protein_id=WP_033651079.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 127338 128462 . + . ID=gene-IY40_RS00845;Name=tgt;gbkey=Gene;gene=tgt;gene_biotype=protein_coding;locus_tag=IY40_RS00845;old_locus_tag=IY40_00855 NZ_JPQY01000002.1 Protein Homology CDS 127338 128462 . + 0 ID=cds-WP_016928877.1;Parent=gene-IY40_RS00845;Dbxref=GenBank:WP_016928877.1;Name=WP_016928877.1;Ontology_term=GO:0006400,GO:0008479,GO:0005737;gbkey=CDS;gene=tgt;go_component=cytoplasm|0005737||IEA;go_function=tRNA-guanosine(34) queuine transglycosylase activity|0008479||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004949244.1;locus_tag=IY40_RS00845;product=tRNA guanosine(34) transglycosylase Tgt;protein_id=WP_016928877.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 128496 128828 . + . ID=gene-IY40_RS00850;Name=yajC;gbkey=Gene;gene=yajC;gene_biotype=protein_coding;locus_tag=IY40_RS00850;old_locus_tag=IY40_00860 NZ_JPQY01000002.1 Protein Homology CDS 128496 128828 . + 0 ID=cds-WP_004940391.1;Parent=gene-IY40_RS00850;Dbxref=GenBank:WP_004940391.1;Name=WP_004940391.1;Ontology_term=GO:0009306,GO:0015450,GO:0005886;gbkey=CDS;gene=yajC;go_component=plasma membrane|0005886||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000007628.1;locus_tag=IY40_RS00850;product=preprotein translocase subunit YajC;protein_id=WP_004940391.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 128853 130700 . + . ID=gene-IY40_RS00855;Name=secD;gbkey=Gene;gene=secD;gene_biotype=protein_coding;locus_tag=IY40_RS00855;old_locus_tag=IY40_00865 NZ_JPQY01000002.1 Protein Homology CDS 128853 130700 . + 0 ID=cds-WP_004940390.1;Parent=gene-IY40_RS00855;Dbxref=GenBank:WP_004940390.1;Name=WP_004940390.1;Ontology_term=GO:0006886,GO:0043952,GO:0015450,GO:0031522;gbkey=CDS;gene=secD;go_component=cell envelope Sec protein transport complex|0031522||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=intracellular protein transport|0006886||IEA,protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005125127.1;locus_tag=IY40_RS00855;product=protein translocase subunit SecD;protein_id=WP_004940390.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 130711 131679 . + . ID=gene-IY40_RS00860;Name=secF;gbkey=Gene;gene=secF;gene_biotype=protein_coding;locus_tag=IY40_RS00860;old_locus_tag=IY40_00870 NZ_JPQY01000002.1 Protein Homology CDS 130711 131679 . + 0 ID=cds-WP_004940389.1;Parent=gene-IY40_RS00860;Dbxref=GenBank:WP_004940389.1;Name=WP_004940389.1;Ontology_term=GO:0006886,GO:0043952,GO:0015450,GO:0031522;gbkey=CDS;gene=secF;go_component=cell envelope Sec protein transport complex|0031522||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=intracellular protein transport|0006886||IEA,protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013649437.1;locus_tag=IY40_RS00860;product=protein translocase subunit SecF;protein_id=WP_004940389.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 131744 132304 . - . ID=gene-IY40_RS00865;Name=IY40_RS00865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS00865;old_locus_tag=IY40_00875 NZ_JPQY01000002.1 Protein Homology CDS 131744 132304 . - 0 ID=cds-WP_025301749.1;Parent=gene-IY40_RS00865;Dbxref=GenBank:WP_025301749.1;Name=WP_025301749.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016928875.1;locus_tag=IY40_RS00865;product=SadB/YajI family lipoprotein;protein_id=WP_025301749.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 132481 132930 . + . ID=gene-IY40_RS00870;Name=nrdR;gbkey=Gene;gene=nrdR;gene_biotype=protein_coding;locus_tag=IY40_RS00870;old_locus_tag=IY40_00880 NZ_JPQY01000002.1 Protein Homology CDS 132481 132930 . + 0 ID=cds-WP_004940387.1;Parent=gene-IY40_RS00870;Dbxref=GenBank:WP_004940387.1;Name=WP_004940387.1;Ontology_term=GO:0006355,GO:0008270,GO:0140110;gbkey=CDS;gene=nrdR;go_function=zinc ion binding|0008270||IEA,transcription regulator activity|0140110||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017458860.1;locus_tag=IY40_RS00870;product=transcriptional regulator NrdR;protein_id=WP_004940387.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 132941 134050 . + . ID=gene-IY40_RS00875;Name=ribD;gbkey=Gene;gene=ribD;gene_biotype=protein_coding;locus_tag=IY40_RS00875;old_locus_tag=IY40_00885 NZ_JPQY01000002.1 Protein Homology CDS 132941 134050 . + 0 ID=cds-WP_025301750.1;Parent=gene-IY40_RS00875;Dbxref=GenBank:WP_025301750.1;Name=WP_025301750.1;Ontology_term=GO:0008270,GO:0008703,GO:0008835,GO:0050661;gbkey=CDS;gene=ribD;go_function=zinc ion binding|0008270||IEA,5-amino-6-(5-phosphoribosylamino)uracil reductase activity|0008703||IEA,diaminohydroxyphosphoribosylaminopyrimidine deaminase activity|0008835||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006319757.1;locus_tag=IY40_RS00875;product=bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD;protein_id=WP_025301750.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 134158 134628 . + . ID=gene-IY40_RS00880;Name=ribH;gbkey=Gene;gene=ribH;gene_biotype=protein_coding;locus_tag=IY40_RS00880;old_locus_tag=IY40_00890 NZ_JPQY01000002.1 Protein Homology CDS 134158 134628 . + 0 ID=cds-WP_004940385.1;Parent=gene-IY40_RS00880;Dbxref=GenBank:WP_004940385.1;Name=WP_004940385.1;Ontology_term=GO:0000906,GO:0009349;gbkey=CDS;gene=ribH;go_component=riboflavin synthase complex|0009349||IEA;go_function=6%2C7-dimethyl-8-ribityllumazine synthase activity|0000906||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308495.1;locus_tag=IY40_RS00880;product=6%2C7-dimethyl-8-ribityllumazine synthase;protein_id=WP_004940385.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 134649 135065 . + . ID=gene-IY40_RS00885;Name=nusB;gbkey=Gene;gene=nusB;gene_biotype=protein_coding;locus_tag=IY40_RS00885;old_locus_tag=IY40_00895 NZ_JPQY01000002.1 Protein Homology CDS 134649 135065 . + 0 ID=cds-WP_004940384.1;Parent=gene-IY40_RS00885;Dbxref=GenBank:WP_004940384.1;Name=WP_004940384.1;Ontology_term=GO:0006353;gbkey=CDS;gene=nusB;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004393185.1;locus_tag=IY40_RS00885;product=transcription antitermination factor NusB;protein_id=WP_004940384.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 135117 136109 . + . ID=gene-IY40_RS00890;Name=thiL;gbkey=Gene;gene=thiL;gene_biotype=protein_coding;locus_tag=IY40_RS00890;old_locus_tag=IY40_00900 NZ_JPQY01000002.1 Protein Homology CDS 135117 136109 . + 0 ID=cds-WP_043135634.1;Parent=gene-IY40_RS00890;Dbxref=GenBank:WP_043135634.1;Name=WP_043135634.1;Ontology_term=GO:0009228,GO:0009030;gbkey=CDS;gene=thiL;go_function=thiamine-phosphate kinase activity|0009030||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016928872.1;locus_tag=IY40_RS00890;product=thiamine-phosphate kinase;protein_id=WP_043135634.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 136102 136596 . + . ID=gene-IY40_RS00895;Name=pgpA;gbkey=Gene;gene=pgpA;gene_biotype=protein_coding;locus_tag=IY40_RS00895;old_locus_tag=IY40_00905 NZ_JPQY01000002.1 Protein Homology CDS 136102 136596 . + 0 ID=cds-WP_004940382.1;Parent=gene-IY40_RS00895;Dbxref=GenBank:WP_004940382.1;Name=WP_004940382.1;Ontology_term=GO:0006629,GO:0008962;gbkey=CDS;gene=pgpA;go_function=phosphatidylglycerophosphatase activity|0008962||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012005516.1;locus_tag=IY40_RS00895;product=phosphatidylglycerophosphatase A;protein_id=WP_004940382.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 136630 137604 . - . ID=gene-IY40_RS00900;Name=IY40_RS00900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS00900;old_locus_tag=IY40_00910 NZ_JPQY01000002.1 Protein Homology CDS 136630 137604 . - 0 ID=cds-WP_043135637.1;Parent=gene-IY40_RS00900;Dbxref=GenBank:WP_043135637.1;Name=WP_043135637.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012005517.1;locus_tag=IY40_RS00900;product=aldo/keto reductase;protein_id=WP_043135637.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 137712 139577 . - . ID=gene-IY40_RS00905;Name=dxs;gbkey=Gene;gene=dxs;gene_biotype=protein_coding;locus_tag=IY40_RS00905;old_locus_tag=IY40_00915 NZ_JPQY01000002.1 Protein Homology CDS 137712 139577 . - 0 ID=cds-WP_025301753.1;Parent=gene-IY40_RS00905;Dbxref=GenBank:WP_025301753.1;Name=WP_025301753.1;Ontology_term=GO:0008615,GO:0009228,GO:0009240,GO:0008661,GO:0005737;gbkey=CDS;gene=dxs;go_component=cytoplasm|0005737||IEA;go_function=1-deoxy-D-xylulose-5-phosphate synthase activity|0008661||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA,thiamine biosynthetic process|0009228||IEA,isopentenyl diphosphate biosynthetic process|0009240||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017891827.1;locus_tag=IY40_RS00905;product=1-deoxy-D-xylulose-5-phosphate synthase;protein_id=WP_025301753.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 139612 140532 . - . ID=gene-IY40_RS00910;Name=ispA;gbkey=Gene;gene=ispA;gene_biotype=protein_coding;locus_tag=IY40_RS00910;old_locus_tag=IY40_00920 NZ_JPQY01000002.1 Protein Homology CDS 139612 140532 . - 0 ID=cds-WP_043135638.1;Parent=gene-IY40_RS00910;Dbxref=GenBank:WP_043135638.1;Name=WP_043135638.1;Ontology_term=GO:0008299;gbkey=CDS;gene=ispA;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006319763.1;locus_tag=IY40_RS00910;product=(2E%2C6E)-farnesyl diphosphate synthase;protein_id=WP_043135638.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 140538 140801 . - . ID=gene-IY40_RS00915;Name=xseB;gbkey=Gene;gene=xseB;gene_biotype=protein_coding;locus_tag=IY40_RS00915;old_locus_tag=IY40_00925 NZ_JPQY01000002.1 Protein Homology CDS 140538 140801 . - 0 ID=cds-WP_025301755.1;Parent=gene-IY40_RS00915;Dbxref=GenBank:WP_025301755.1;Name=WP_025301755.1;gbkey=CDS;gene=xseB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308503.1;locus_tag=IY40_RS00915;product=exodeoxyribonuclease VII small subunit;protein_id=WP_025301755.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 140962 142410 . + . ID=gene-IY40_RS00920;Name=thiI;gbkey=Gene;gene=thiI;gene_biotype=protein_coding;locus_tag=IY40_RS00920;old_locus_tag=IY40_00930 NZ_JPQY01000002.1 Protein Homology CDS 140962 142410 . + 0 ID=cds-WP_043135640.1;Parent=gene-IY40_RS00920;Dbxref=GenBank:WP_043135640.1;Name=WP_043135640.1;Ontology_term=GO:0006400,GO:0009228,GO:0140741;gbkey=CDS;gene=thiI;go_function=tRNA-uracil-4 sulfurtransferase activity|0140741||IEA;go_process=tRNA modification|0006400||IEA,thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014168857.1;locus_tag=IY40_RS00920;product=tRNA uracil 4-sulfurtransferase ThiI;protein_id=WP_043135640.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 142477 143067 . - . ID=gene-IY40_RS00925;Name=yajL;gbkey=Gene;gene=yajL;gene_biotype=protein_coding;locus_tag=IY40_RS00925;old_locus_tag=IY40_00935 NZ_JPQY01000002.1 Protein Homology CDS 142477 143067 . - 0 ID=cds-WP_043135643.1;Parent=gene-IY40_RS00925;Dbxref=GenBank:WP_043135643.1;Name=WP_043135643.1;gbkey=CDS;gene=yajL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006323929.1;locus_tag=IY40_RS00925;product=protein deglycase YajL;protein_id=WP_043135643.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 143030 143941 . - . ID=gene-IY40_RS00930;Name=panE;gbkey=Gene;gene=panE;gene_biotype=protein_coding;locus_tag=IY40_RS00930;old_locus_tag=IY40_00940 NZ_JPQY01000002.1 Protein Homology CDS 143030 143941 . - 0 ID=cds-WP_025301758.1;Parent=gene-IY40_RS00930;Dbxref=GenBank:WP_025301758.1;Name=WP_025301758.1;Ontology_term=GO:0015940,GO:0008677;gbkey=CDS;gene=panE;go_function=2-dehydropantoate 2-reductase activity|0008677||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208656.1;locus_tag=IY40_RS00930;product=2-dehydropantoate 2-reductase;protein_id=WP_025301758.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 144124 144615 . + . ID=gene-IY40_RS00935;Name=IY40_RS00935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS00935;old_locus_tag=IY40_00945 NZ_JPQY01000002.1 Protein Homology CDS 144124 144615 . + 0 ID=cds-WP_025301759.1;Parent=gene-IY40_RS00935;Dbxref=GenBank:WP_025301759.1;Name=WP_025301759.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019082537.1;locus_tag=IY40_RS00935;product=YajQ family cyclic di-GMP-binding protein;protein_id=WP_025301759.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 144650 146014 . - . ID=gene-IY40_RS00940;Name=IY40_RS00940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS00940;old_locus_tag=IY40_00950 NZ_JPQY01000002.1 Protein Homology CDS 144650 146014 . - 0 ID=cds-WP_025301760.1;Parent=gene-IY40_RS00940;Dbxref=GenBank:WP_025301760.1;Name=WP_025301760.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012005525.1;locus_tag=IY40_RS00940;product=MFS transporter;protein_id=WP_025301760.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 146213 147103 . - . ID=gene-IY40_RS00945;Name=cyoE;gbkey=Gene;gene=cyoE;gene_biotype=protein_coding;locus_tag=IY40_RS00945;old_locus_tag=IY40_00955 NZ_JPQY01000002.1 Protein Homology CDS 146213 147103 . - 0 ID=cds-WP_025301761.1;Parent=gene-IY40_RS00945;Dbxref=GenBank:WP_025301761.1;Name=WP_025301761.1;Ontology_term=GO:0048034,GO:0008495,GO:0016020;gbkey=CDS;gene=cyoE;go_component=membrane|0016020||IEA;go_function=protoheme IX farnesyltransferase activity|0008495||IEA;go_process=heme O biosynthetic process|0048034||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007705361.1;locus_tag=IY40_RS00945;product=heme o synthase;protein_id=WP_025301761.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 147121 147459 . - . ID=gene-IY40_RS00950;Name=IY40_RS00950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS00950;old_locus_tag=IY40_00960 NZ_JPQY01000002.1 Protein Homology CDS 147121 147459 . - 0 ID=cds-WP_016928864.1;Parent=gene-IY40_RS00950;Dbxref=GenBank:WP_016928864.1;Name=WP_016928864.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208652.1;locus_tag=IY40_RS00950;product=cytochrome o ubiquinol oxidase subunit IV;protein_id=WP_016928864.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 147459 148073 . - . ID=gene-IY40_RS00955;Name=IY40_RS00955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS00955;old_locus_tag=IY40_00965 NZ_JPQY01000002.1 Protein Homology CDS 147459 148073 . - 0 ID=cds-WP_004940367.1;Parent=gene-IY40_RS00955;Dbxref=GenBank:WP_004940367.1;Name=WP_004940367.1;Ontology_term=GO:0022904,GO:0004129;gbkey=CDS;go_function=cytochrome-c oxidase activity|0004129||IEA;go_process=respiratory electron transport chain|0022904||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005163525.1;locus_tag=IY40_RS00955;product=cytochrome o ubiquinol oxidase subunit III;protein_id=WP_004940367.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 148063 150054 . - . ID=gene-IY40_RS00960;Name=cyoB;gbkey=Gene;gene=cyoB;gene_biotype=protein_coding;locus_tag=IY40_RS00960;old_locus_tag=IY40_00970 NZ_JPQY01000002.1 Protein Homology CDS 148063 150054 . - 0 ID=cds-WP_025301762.1;Parent=gene-IY40_RS00960;Dbxref=GenBank:WP_025301762.1;Name=WP_025301762.1;Ontology_term=GO:0004129;gbkey=CDS;gene=cyoB;go_function=cytochrome-c oxidase activity|0004129||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208650.1;locus_tag=IY40_RS00960;product=cytochrome o ubiquinol oxidase subunit I;protein_id=WP_025301762.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 150058 151008 . - . ID=gene-IY40_RS00965;Name=cyoA;gbkey=Gene;gene=cyoA;gene_biotype=protein_coding;locus_tag=IY40_RS00965;old_locus_tag=IY40_00975 NZ_JPQY01000002.1 Protein Homology CDS 150058 151008 . - 0 ID=cds-WP_025301763.1;Parent=gene-IY40_RS00965;Dbxref=GenBank:WP_025301763.1;Name=WP_025301763.1;Ontology_term=GO:0022900,GO:0004129;gbkey=CDS;gene=cyoA;go_function=cytochrome-c oxidase activity|0004129||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005167626.1;locus_tag=IY40_RS00965;product=cytochrome o ubiquinol oxidase subunit II;protein_id=WP_025301763.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 151449 152927 . - . ID=gene-IY40_RS00970;Name=ampG;gbkey=Gene;gene=ampG;gene_biotype=protein_coding;locus_tag=IY40_RS00970;old_locus_tag=IY40_00980 NZ_JPQY01000002.1 Protein Homology CDS 151449 152927 . - 0 ID=cds-WP_025301764.1;Parent=gene-IY40_RS00970;Dbxref=GenBank:WP_025301764.1;Name=WP_025301764.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=ampG;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006319784.1;locus_tag=IY40_RS00970;product=muropeptide MFS transporter AmpG;protein_id=WP_025301764.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 152979 153557 . - . ID=gene-IY40_RS00975;Name=IY40_RS00975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS00975;old_locus_tag=IY40_00985 NZ_JPQY01000002.1 Protein Homology CDS 152979 153557 . - 0 ID=cds-WP_033634001.1;Parent=gene-IY40_RS00975;Dbxref=GenBank:WP_033634001.1;Name=WP_033634001.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208646.1;locus_tag=IY40_RS00975;product=lipoprotein;protein_id=WP_033634001.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 153872 154186 . + . ID=gene-IY40_RS00980;Name=bolA;gbkey=Gene;gene=bolA;gene_biotype=protein_coding;locus_tag=IY40_RS00980;old_locus_tag=IY40_00990 NZ_JPQY01000002.1 Protein Homology CDS 153872 154186 . + 0 ID=cds-WP_004940361.1;Parent=gene-IY40_RS00980;Dbxref=GenBank:WP_004940361.1;Name=WP_004940361.1;gbkey=CDS;gene=bolA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004949296.1;locus_tag=IY40_RS00980;product=transcriptional regulator BolA;protein_id=WP_004940361.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 154554 155858 . + . ID=gene-IY40_RS00985;Name=tig;gbkey=Gene;gene=tig;gene_biotype=protein_coding;locus_tag=IY40_RS00985;old_locus_tag=IY40_00995 NZ_JPQY01000002.1 Protein Homology CDS 154554 155858 . + 0 ID=cds-WP_004940358.1;Parent=gene-IY40_RS00985;Dbxref=GenBank:WP_004940358.1;Name=WP_004940358.1;Ontology_term=GO:0015031,GO:0051083,GO:0003755,GO:0051082,GO:0005854;gbkey=CDS;gene=tig;go_component=nascent polypeptide-associated complex|0005854||IEA;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA,unfolded protein binding|0051082||IEA;go_process=protein transport|0015031||IEA,'de novo' cotranslational protein folding|0051083||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004703366.1;locus_tag=IY40_RS00985;product=trigger factor;protein_id=WP_004940358.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 156297 156920 . + . ID=gene-IY40_RS00990;Name=clpP;gbkey=Gene;gene=clpP;gene_biotype=protein_coding;locus_tag=IY40_RS00990;old_locus_tag=IY40_01000 NZ_JPQY01000002.1 Protein Homology CDS 156297 156920 . + 0 ID=cds-WP_004940356.1;Parent=gene-IY40_RS00990;Dbxref=GenBank:WP_004940356.1;Name=WP_004940356.1;Ontology_term=GO:0006508,GO:0004176,GO:0004252,GO:0009368;gbkey=CDS;gene=clpP;go_component=endopeptidase Clp complex|0009368||IEA;go_function=ATP-dependent peptidase activity|0004176||IEA,serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006809880.1;locus_tag=IY40_RS00990;product=ATP-dependent Clp endopeptidase proteolytic subunit ClpP;protein_id=WP_004940356.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 157064 158335 . + . ID=gene-IY40_RS00995;Name=clpX;gbkey=Gene;gene=clpX;gene_biotype=protein_coding;locus_tag=IY40_RS00995;old_locus_tag=IY40_01005 NZ_JPQY01000002.1 Protein Homology CDS 157064 158335 . + 0 ID=cds-WP_004940354.1;Parent=gene-IY40_RS00995;Dbxref=GenBank:WP_004940354.1;Name=WP_004940354.1;Ontology_term=GO:0005524,GO:0051082,GO:0140662,GO:0009368;gbkey=CDS;gene=clpX;go_component=endopeptidase Clp complex|0009368||IEA;go_function=ATP binding|0005524||IEA,unfolded protein binding|0051082||IEA,ATP-dependent protein folding chaperone|0140662||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001396736.1;locus_tag=IY40_RS00995;product=ATP-dependent protease ATP-binding subunit ClpX;protein_id=WP_004940354.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 158530 160884 . + . ID=gene-IY40_RS01000;Name=lon;gbkey=Gene;gene=lon;gene_biotype=protein_coding;locus_tag=IY40_RS01000;old_locus_tag=IY40_01010 NZ_JPQY01000002.1 Protein Homology CDS 158530 160884 . + 0 ID=cds-WP_025301766.1;Parent=gene-IY40_RS01000;Dbxref=GenBank:WP_025301766.1;Name=WP_025301766.1;Ontology_term=GO:0006508,GO:0004176,GO:0004252,GO:0016887,GO:0043565;gbkey=CDS;gene=lon;go_function=ATP-dependent peptidase activity|0004176||IEA,serine-type endopeptidase activity|0004252||IEA,ATP hydrolysis activity|0016887||IEA,sequence-specific DNA binding|0043565||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414973.1;locus_tag=IY40_RS01000;product=endopeptidase La;protein_id=WP_025301766.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 161101 161373 . + . ID=gene-IY40_RS01005;Name=hupB;gbkey=Gene;gene=hupB;gene_biotype=protein_coding;locus_tag=IY40_RS01005;old_locus_tag=IY40_01015 NZ_JPQY01000002.1 Protein Homology CDS 161101 161373 . + 0 ID=cds-WP_004940351.1;Parent=gene-IY40_RS01005;Dbxref=GenBank:WP_004940351.1;Name=WP_004940351.1;gbkey=CDS;gene=hupB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016535194.1;locus_tag=IY40_RS01005;product=nucleoid-associated protein HU-beta;protein_id=WP_004940351.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 161552 163435 . + . ID=gene-IY40_RS01010;Name=ppiD;gbkey=Gene;gene=ppiD;gene_biotype=protein_coding;locus_tag=IY40_RS01010;old_locus_tag=IY40_01020 NZ_JPQY01000002.1 Protein Homology CDS 161552 163435 . + 0 ID=cds-WP_043135648.1;Parent=gene-IY40_RS01010;Dbxref=GenBank:WP_043135648.1;Name=WP_043135648.1;Ontology_term=GO:0003755;gbkey=CDS;gene=ppiD;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208638.1;locus_tag=IY40_RS01010;product=peptidylprolyl isomerase;protein_id=WP_043135648.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 163574 163954 . + . ID=gene-IY40_RS01015;Name=IY40_RS01015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS01015;old_locus_tag=IY40_01025 NZ_JPQY01000002.1 Protein Homology CDS 163574 163954 . + 0 ID=cds-WP_043135650.1;Parent=gene-IY40_RS01015;Dbxref=GenBank:WP_043135650.1;Name=WP_043135650.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016928856.1;locus_tag=IY40_RS01015;product=ComEA family DNA-binding protein;protein_id=WP_043135650.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 164109 164522 . + . ID=gene-IY40_RS01020;Name=IY40_RS01020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS01020;old_locus_tag=IY40_01030 NZ_JPQY01000002.1 Protein Homology CDS 164109 164522 . + 0 ID=cds-WP_025301769.1;Parent=gene-IY40_RS01020;Dbxref=GenBank:WP_025301769.1;Name=WP_025301769.1;Ontology_term=GO:0016787,GO:0016790;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,thiolester hydrolase activity|0016790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004940344.1;locus_tag=IY40_RS01020;product=acyl-CoA thioesterase;protein_id=WP_025301769.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 164558 165256 . - . ID=gene-IY40_RS01025;Name=queC;gbkey=Gene;gene=queC;gene_biotype=protein_coding;locus_tag=IY40_RS01025;old_locus_tag=IY40_01035 NZ_JPQY01000002.1 Protein Homology CDS 164558 165256 . - 0 ID=cds-WP_025301770.1;Parent=gene-IY40_RS01025;Dbxref=GenBank:WP_025301770.1;Name=WP_025301770.1;gbkey=CDS;gene=queC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006709516.1;locus_tag=IY40_RS01025;product=7-cyano-7-deazaguanine synthase QueC;protein_id=WP_025301770.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 165372 167087 . - . ID=gene-IY40_RS01030;Name=IY40_RS01030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS01030;old_locus_tag=IY40_01040 NZ_JPQY01000002.1 Protein Homology CDS 165372 167087 . - 0 ID=cds-WP_043135653.1;Parent=gene-IY40_RS01030;Dbxref=GenBank:WP_043135653.1;Name=WP_043135653.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004940342.1;locus_tag=IY40_RS01030;product=SgrR family transcriptional regulator;protein_id=WP_043135653.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 167191 168015 . + . ID=gene-IY40_RS01035;Name=cof;gbkey=Gene;gene=cof;gene_biotype=protein_coding;locus_tag=IY40_RS01035;old_locus_tag=IY40_01045 NZ_JPQY01000002.1 Protein Homology CDS 167191 168015 . + 0 ID=cds-WP_025301772.1;Parent=gene-IY40_RS01035;Dbxref=GenBank:WP_025301772.1;Name=WP_025301772.1;Ontology_term=GO:0016818;gbkey=CDS;gene=cof;go_function=hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015376850.1;locus_tag=IY40_RS01035;product=HMP-PP phosphatase;protein_id=WP_025301772.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 168077 169117 . - . ID=gene-IY40_RS01040;Name=IY40_RS01040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS01040;old_locus_tag=IY40_01050 NZ_JPQY01000002.1 Protein Homology CDS 168077 169117 . - 0 ID=cds-WP_043135655.1;Parent=gene-IY40_RS01040;Dbxref=GenBank:WP_043135655.1;Name=WP_043135655.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004392656.1;locus_tag=IY40_RS01040;product=PLP-dependent cysteine synthase family protein;protein_id=WP_043135655.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 169240 169701 . + . ID=gene-IY40_RS01045;Name=IY40_RS01045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS01045;old_locus_tag=IY40_01055 NZ_JPQY01000002.1 Protein Homology CDS 169240 169701 . + 0 ID=cds-WP_004940330.1;Parent=gene-IY40_RS01045;Dbxref=GenBank:WP_004940330.1;Name=WP_004940330.1;Ontology_term=GO:0043565;gbkey=CDS;go_function=sequence-specific DNA binding|0043565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208630.1;locus_tag=IY40_RS01045;product=Lrp/AsnC family transcriptional regulator;protein_id=WP_004940330.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 169794 171569 . + . ID=gene-IY40_RS01050;Name=smdA;gbkey=Gene;gene=smdA;gene_biotype=protein_coding;locus_tag=IY40_RS01050;old_locus_tag=IY40_01060 NZ_JPQY01000002.1 Protein Homology CDS 169794 171569 . + 0 ID=cds-WP_043135657.1;Parent=gene-IY40_RS01050;Dbxref=GenBank:WP_043135657.1;Name=WP_043135657.1;gbkey=CDS;gene=smdA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_114508865.1;locus_tag=IY40_RS01050;product=multidrug efflux ABC transporter permease/ATP-binding subunit SmdA;protein_id=WP_043135657.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 171562 173340 . + . ID=gene-IY40_RS01055;Name=smdB;gbkey=Gene;gene=smdB;gene_biotype=protein_coding;locus_tag=IY40_RS01055;old_locus_tag=IY40_01065 NZ_JPQY01000002.1 Protein Homology CDS 171562 173340 . + 0 ID=cds-WP_043135659.1;Parent=gene-IY40_RS01055;Dbxref=GenBank:WP_043135659.1;Name=WP_043135659.1;gbkey=CDS;gene=smdB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013811752.1;locus_tag=IY40_RS01055;product=multidrug efflux ABC transporter permease/ATP-binding subunit SmdB;protein_id=WP_043135659.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 173620 173958 . + . ID=gene-IY40_RS01060;Name=glnK;gbkey=Gene;gene=glnK;gene_biotype=protein_coding;locus_tag=IY40_RS01060;old_locus_tag=IY40_01070 NZ_JPQY01000002.1 Protein Homology CDS 173620 173958 . + 0 ID=cds-WP_004940327.1;Parent=gene-IY40_RS01060;Dbxref=GenBank:WP_004940327.1;Name=WP_004940327.1;Ontology_term=GO:0006808,GO:0030234;gbkey=CDS;gene=glnK;go_function=enzyme regulator activity|0030234||IEA;go_process=regulation of nitrogen utilization|0006808||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015367937.1;locus_tag=IY40_RS01060;product=P-II family nitrogen regulator;protein_id=WP_004940327.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 173995 175281 . + . ID=gene-IY40_RS01065;Name=amtB;gbkey=Gene;gene=amtB;gene_biotype=protein_coding;locus_tag=IY40_RS01065;old_locus_tag=IY40_01075 NZ_JPQY01000002.1 Protein Homology CDS 173995 175281 . + 0 ID=cds-WP_038628958.1;Parent=gene-IY40_RS01065;Dbxref=GenBank:WP_038628958.1;Name=WP_038628958.1;Ontology_term=GO:0072488,GO:0008519,GO:0005886;gbkey=CDS;gene=amtB;go_component=plasma membrane|0005886||IEA;go_function=ammonium channel activity|0008519||IEA;go_process=ammonium transmembrane transport|0072488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004718723.1;locus_tag=IY40_RS01065;product=ammonium transporter AmtB;protein_id=WP_038628958.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 175372 176235 . - . ID=gene-IY40_RS01070;Name=tesB;gbkey=Gene;gene=tesB;gene_biotype=protein_coding;locus_tag=IY40_RS01070;old_locus_tag=IY40_01080 NZ_JPQY01000002.1 Protein Homology CDS 175372 176235 . - 0 ID=cds-WP_016928847.1;Parent=gene-IY40_RS01070;Dbxref=GenBank:WP_016928847.1;Name=WP_016928847.1;gbkey=CDS;gene=tesB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019454178.1;locus_tag=IY40_RS01070;product=acyl-CoA thioesterase II;protein_id=WP_016928847.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 176467 176958 . + . ID=gene-IY40_RS01075;Name=IY40_RS01075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS01075;old_locus_tag=IY40_01085 NZ_JPQY01000002.1 Protein Homology CDS 176467 176958 . + 0 ID=cds-WP_025301777.1;Parent=gene-IY40_RS01075;Dbxref=GenBank:WP_025301777.1;Name=WP_025301777.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004940318.1;locus_tag=IY40_RS01075;product=YbaY family lipoprotein;protein_id=WP_025301777.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 177023 177337 . - . ID=gene-IY40_RS01080;Name=IY40_RS01080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS01080;old_locus_tag=IY40_01090 NZ_JPQY01000002.1 Protein Homology CDS 177023 177337 . - 0 ID=cds-WP_025301778.1;Parent=gene-IY40_RS01080;Dbxref=GenBank:WP_025301778.1;Name=WP_025301778.1;Ontology_term=GO:0006281,GO:0003677,GO:0003824,GO:0003908;gbkey=CDS;go_function=DNA binding|0003677||IEA,catalytic activity|0003824||IEA,methylated-DNA-[protein]-cysteine S-methyltransferase activity|0003908||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017891845.1;locus_tag=IY40_RS01080;product=MGMT family protein;protein_id=WP_025301778.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 177494 177590 . + . ID=gene-IY40_RS24970;Name=ffs;gbkey=Gene;gene=ffs;gene_biotype=SRP_RNA;locus_tag=IY40_RS24970 NZ_JPQY01000002.1 cmsearch SRP_RNA 177494 177590 . + . ID=rna-IY40_RS24970;Parent=gene-IY40_RS24970;Dbxref=RFAM:RF00169;gbkey=ncRNA;gene=ffs;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=IY40_RS24970;product=signal recognition particle sRNA small type NZ_JPQY01000002.1 cmsearch exon 177494 177590 . + . ID=exon-IY40_RS24970-1;Parent=rna-IY40_RS24970;Dbxref=RFAM:RF00169;gbkey=ncRNA;gene=ffs;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=IY40_RS24970;product=signal recognition particle sRNA small type NZ_JPQY01000002.1 RefSeq gene 177921 178124 . - . ID=gene-IY40_RS01085;Name=IY40_RS01085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS01085;old_locus_tag=IY40_01095 NZ_JPQY01000002.1 Protein Homology CDS 177921 178124 . - 0 ID=cds-WP_004940313.1;Parent=gene-IY40_RS01085;Dbxref=GenBank:WP_004940313.1;Name=WP_004940313.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208622.1;locus_tag=IY40_RS01085;product=HHA domain-containing protein;protein_id=WP_004940313.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 178175 178543 . - . ID=gene-IY40_RS01090;Name=tomB;gbkey=Gene;gene=tomB;gene_biotype=protein_coding;locus_tag=IY40_RS01090;old_locus_tag=IY40_01100 NZ_JPQY01000002.1 Protein Homology CDS 178175 178543 . - 0 ID=cds-WP_004940312.1;Parent=gene-IY40_RS01090;Dbxref=GenBank:WP_004940312.1;Name=WP_004940312.1;gbkey=CDS;gene=tomB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004703332.1;locus_tag=IY40_RS01090;product=Hha toxicity modulator TomB;protein_id=WP_004940312.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 178702 179055 . - . ID=gene-IY40_RS01095;Name=IY40_RS01095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS01095;old_locus_tag=IY40_01105 NZ_JPQY01000002.1 Protein Homology CDS 178702 179055 . - 0 ID=cds-WP_025301779.1;Parent=gene-IY40_RS01095;Dbxref=GenBank:WP_025301779.1;Name=WP_025301779.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016928845.1;locus_tag=IY40_RS01095;product=hypothetical protein;protein_id=WP_025301779.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 179464 180177 . + . ID=gene-IY40_RS01100;Name=IY40_RS01100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS01100;old_locus_tag=IY40_01115 NZ_JPQY01000002.1 Protein Homology CDS 179464 180177 . + 0 ID=cds-WP_043135662.1;Parent=gene-IY40_RS01100;Dbxref=GenBank:WP_043135662.1;Name=WP_043135662.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006323974.1;locus_tag=IY40_RS01100;product=metal ABC transporter ATP-binding protein;protein_id=WP_043135662.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 180174 181031 . + . ID=gene-IY40_RS01105;Name=IY40_RS01105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS01105;old_locus_tag=IY40_01120 NZ_JPQY01000002.1 Protein Homology CDS 180174 181031 . + 0 ID=cds-WP_043135664.1;Parent=gene-IY40_RS01105;Dbxref=GenBank:WP_043135664.1;Name=WP_043135664.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004949351.1;locus_tag=IY40_RS01105;product=metal ABC transporter permease;protein_id=WP_043135664.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 181057 181935 . + . ID=gene-IY40_RS01110;Name=IY40_RS01110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS01110;old_locus_tag=IY40_01125 NZ_JPQY01000002.1 Protein Homology CDS 181057 181935 . + 0 ID=cds-WP_043135666.1;Parent=gene-IY40_RS01110;Dbxref=GenBank:WP_043135666.1;Name=WP_043135666.1;Ontology_term=GO:0030001,GO:0005524,GO:0042626,GO:0046872,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,metal ion binding|0046872||IEA,ABC-type transporter activity|0140359||IEA;go_process=metal ion transport|0030001||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019081287.1;locus_tag=IY40_RS01110;product=metal ABC transporter substrate-binding protein;protein_id=WP_043135666.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 182044 182184 . - . ID=gene-IY40_RS01115;Name=ykgO;gbkey=Gene;gene=ykgO;gene_biotype=protein_coding;locus_tag=IY40_RS01115;old_locus_tag=IY40_01130 NZ_JPQY01000002.1 Protein Homology CDS 182044 182184 . - 0 ID=cds-WP_004940304.1;Parent=gene-IY40_RS01115;Dbxref=GenBank:WP_004940304.1;Name=WP_004940304.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=ykgO;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020079454.1;locus_tag=IY40_RS01115;product=type B 50S ribosomal protein L36;protein_id=WP_004940304.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 182197 182451 . - . ID=gene-IY40_RS01120;Name=IY40_RS01120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS01120;old_locus_tag=IY40_01135 NZ_JPQY01000002.1 Protein Homology CDS 182197 182451 . - 0 ID=cds-WP_004940303.1;Parent=gene-IY40_RS01120;Dbxref=GenBank:WP_004940303.1;Name=WP_004940303.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012005564.1;locus_tag=IY40_RS01120;product=type B 50S ribosomal protein L31;protein_id=WP_004940303.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 182638 185784 . - . ID=gene-IY40_RS01125;Name=sdeY;gbkey=Gene;gene=sdeY;gene_biotype=protein_coding;locus_tag=IY40_RS01125;old_locus_tag=IY40_01140 NZ_JPQY01000002.1 Protein Homology CDS 182638 185784 . - 0 ID=cds-WP_025301783.1;Parent=gene-IY40_RS01125;Dbxref=GenBank:WP_025301783.1;Name=WP_025301783.1;gbkey=CDS;gene=sdeY;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225488.1;locus_tag=IY40_RS01125;product=multidrug efflux RND transporter permease subunit SdeY;protein_id=WP_025301783.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 185802 186989 . - . ID=gene-IY40_RS01130;Name=sdeX;gbkey=Gene;gene=sdeX;gene_biotype=protein_coding;locus_tag=IY40_RS01130;old_locus_tag=IY40_01145 NZ_JPQY01000002.1 Protein Homology CDS 185802 186989 . - 0 ID=cds-WP_025301784.1;Parent=gene-IY40_RS01130;Dbxref=GenBank:WP_025301784.1;Name=WP_025301784.1;gbkey=CDS;gene=sdeX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_115586223.1;locus_tag=IY40_RS01130;product=multidrug efflux RND transporter periplasmic adaptor subunit SdeX;protein_id=WP_025301784.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 187132 187806 . + . ID=gene-IY40_RS01135;Name=acrR;gbkey=Gene;gene=acrR;gene_biotype=protein_coding;locus_tag=IY40_RS01135;old_locus_tag=IY40_01150 NZ_JPQY01000002.1 Protein Homology CDS 187132 187806 . + 0 ID=cds-WP_043135668.1;Parent=gene-IY40_RS01135;Dbxref=GenBank:WP_043135668.1;Name=WP_043135668.1;gbkey=CDS;gene=acrR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017891858.1;locus_tag=IY40_RS01135;product=multidrug efflux transporter transcriptional repressor AcrR;protein_id=WP_043135668.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 187818 188171 . + . ID=gene-IY40_RS01140;Name=IY40_RS01140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS01140;old_locus_tag=IY40_01155 NZ_JPQY01000002.1 Protein Homology CDS 187818 188171 . + 0 ID=cds-WP_004940282.1;Parent=gene-IY40_RS01140;Dbxref=GenBank:WP_004940282.1;Name=WP_004940282.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304498.1;locus_tag=IY40_RS01140;product=DsrE/DsrF/TusD sulfur relay family protein;protein_id=WP_004940282.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 188272 191655 . + . ID=gene-IY40_RS01145;Name=mscK;gbkey=Gene;gene=mscK;gene_biotype=protein_coding;locus_tag=IY40_RS01145;old_locus_tag=IY40_01160 NZ_JPQY01000002.1 Protein Homology CDS 188272 191655 . + 0 ID=cds-WP_043135671.1;Parent=gene-IY40_RS01145;Dbxref=GenBank:WP_043135671.1;Name=WP_043135671.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=mscK;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015376863.1;locus_tag=IY40_RS01145;product=mechanosensitive channel MscK;protein_id=WP_043135671.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 191696 191875 . - . ID=gene-IY40_RS01150;Name=rsmS;gbkey=Gene;gene=rsmS;gene_biotype=protein_coding;locus_tag=IY40_RS01150;old_locus_tag=IY40_01165 NZ_JPQY01000002.1 Protein Homology CDS 191696 191875 . - 0 ID=cds-WP_016928837.1;Parent=gene-IY40_RS01150;Dbxref=GenBank:WP_016928837.1;Name=WP_016928837.1;gbkey=CDS;gene=rsmS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016928837.1;locus_tag=IY40_RS01150;product=pleiotropic regulatory protein RsmS;protein_id=WP_016928837.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 191982 192518 . - . ID=gene-IY40_RS01155;Name=priC;gbkey=Gene;gene=priC;gene_biotype=protein_coding;locus_tag=IY40_RS01155;old_locus_tag=IY40_01170 NZ_JPQY01000002.1 Protein Homology CDS 191982 192518 . - 0 ID=cds-WP_025301787.1;Parent=gene-IY40_RS01155;Dbxref=GenBank:WP_025301787.1;Name=WP_025301787.1;gbkey=CDS;gene=priC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011191876.1;locus_tag=IY40_RS01155;product=primosomal replication protein PriC;protein_id=WP_025301787.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 192653 193033 . + . ID=gene-IY40_RS01160;Name=IY40_RS01160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS01160;old_locus_tag=IY40_01175 NZ_JPQY01000002.1 Protein Homology CDS 192653 193033 . + 0 ID=cds-WP_043135674.1;Parent=gene-IY40_RS01160;Dbxref=GenBank:WP_043135674.1;Name=WP_043135674.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012005572.1;locus_tag=IY40_RS01160;product=DUF454 family protein;protein_id=WP_043135674.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 193187 193738 . + . ID=gene-IY40_RS01165;Name=apt;gbkey=Gene;gene=apt;gene_biotype=protein_coding;locus_tag=IY40_RS01165;old_locus_tag=IY40_01180 NZ_JPQY01000002.1 Protein Homology CDS 193187 193738 . + 0 ID=cds-WP_019454166.1;Parent=gene-IY40_RS01165;Dbxref=GenBank:WP_019454166.1;Name=WP_019454166.1;Ontology_term=GO:0006168,GO:0003999;gbkey=CDS;gene=apt;go_function=adenine phosphoribosyltransferase activity|0003999||IEA;go_process=adenine salvage|0006168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008805445.1;locus_tag=IY40_RS01165;product=adenine phosphoribosyltransferase;protein_id=WP_019454166.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 193831 195789 . + . ID=gene-IY40_RS01170;Name=dnaX;gbkey=Gene;gene=dnaX;gene_biotype=protein_coding;locus_tag=IY40_RS01170;old_locus_tag=IY40_01185 NZ_JPQY01000002.1 Protein Homology CDS 193831 195789 . + 0 ID=cds-WP_043135676.1;Parent=gene-IY40_RS01170;Dbxref=GenBank:WP_043135676.1;Name=WP_043135676.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887,GO:0005524,GO:0009360;gbkey=CDS;gene=dnaX;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013811788.1;locus_tag=IY40_RS01170;product=DNA polymerase III subunit gamma/tau;protein_id=WP_043135676.1;transl_table=11 NZ_JPQY01000002.1 cmsearch sequence_feature 195122 195186 . + . ID=id-IY40_RS01170;Dbxref=RFAM:RF00382;Note=DnaX frameshifting element;gbkey=misc_feature;gene=dnaX;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=IY40_RS01170 NZ_JPQY01000002.1 RefSeq gene 195831 196160 . + . ID=gene-IY40_RS01175;Name=IY40_RS01175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS01175;old_locus_tag=IY40_01190 NZ_JPQY01000002.1 Protein Homology CDS 195831 196160 . + 0 ID=cds-WP_025301790.1;Parent=gene-IY40_RS01175;Dbxref=GenBank:WP_025301790.1;Name=WP_025301790.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001364632.1;locus_tag=IY40_RS01175;product=YbaB/EbfC family nucleoid-associated protein;protein_id=WP_025301790.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 196160 196765 . + . ID=gene-IY40_RS01180;Name=recR;gbkey=Gene;gene=recR;gene_biotype=protein_coding;locus_tag=IY40_RS01180;old_locus_tag=IY40_01195 NZ_JPQY01000002.1 Protein Homology CDS 196160 196765 . + 0 ID=cds-WP_025301791.1;Parent=gene-IY40_RS01180;Dbxref=GenBank:WP_025301791.1;Name=WP_025301791.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677,GO:0046872;gbkey=CDS;gene=recR;go_function=DNA binding|0003677||IEA,metal ion binding|0046872||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012005576.1;locus_tag=IY40_RS01180;product=recombination mediator RecR;protein_id=WP_025301791.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 196910 198775 . + . ID=gene-IY40_RS01185;Name=htpG;gbkey=Gene;gene=htpG;gene_biotype=protein_coding;locus_tag=IY40_RS01185;old_locus_tag=IY40_01200 NZ_JPQY01000002.1 Protein Homology CDS 196910 198775 . + 0 ID=cds-WP_038628970.1;Parent=gene-IY40_RS01185;Dbxref=GenBank:WP_038628970.1;Name=WP_038628970.1;Ontology_term=GO:0006457,GO:0005524,GO:0016887,GO:0051082;gbkey=CDS;gene=htpG;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013649462.1;locus_tag=IY40_RS01185;product=molecular chaperone HtpG;protein_id=WP_038628970.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 198979 199623 . + . ID=gene-IY40_RS01190;Name=adk;gbkey=Gene;gene=adk;gene_biotype=protein_coding;locus_tag=IY40_RS01190;old_locus_tag=IY40_01205 NZ_JPQY01000002.1 Protein Homology CDS 198979 199623 . + 0 ID=cds-WP_025301793.1;Parent=gene-IY40_RS01190;Dbxref=GenBank:WP_025301793.1;Name=WP_025301793.1;Ontology_term=GO:0006139,GO:0004017,GO:0005524;gbkey=CDS;gene=adk;go_function=AMP kinase activity|0004017||IEA,ATP binding|0005524||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415007.1;locus_tag=IY40_RS01190;product=adenylate kinase;protein_id=WP_025301793.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 199790 200923 . + . ID=gene-IY40_RS01195;Name=IY40_RS01195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS01195;old_locus_tag=IY40_01210 NZ_JPQY01000002.1 Protein Homology CDS 199790 200923 . + 0 ID=cds-WP_043135679.1;Parent=gene-IY40_RS01195;Dbxref=GenBank:WP_043135679.1;Name=WP_043135679.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019454162.1;locus_tag=IY40_RS01195;product=sugar diacid recognition domain-containing protein;protein_id=WP_043135679.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 201043 202308 . + . ID=gene-IY40_RS01200;Name=IY40_RS01200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS01200;old_locus_tag=IY40_01215 NZ_JPQY01000002.1 Protein Homology CDS 201043 202308 . + 0 ID=cds-WP_043135681.1;Parent=gene-IY40_RS01200;Dbxref=GenBank:WP_043135681.1;Name=WP_043135681.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000200871.1;locus_tag=IY40_RS01200;product=GntP family permease;protein_id=WP_043135681.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 202318 203481 . + . ID=gene-IY40_RS01205;Name=IY40_RS01205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS01205;old_locus_tag=IY40_01220 NZ_JPQY01000002.1 Protein Homology CDS 202318 203481 . + 0 ID=cds-WP_043135683.1;Parent=gene-IY40_RS01205;Dbxref=GenBank:WP_043135683.1;Name=WP_043135683.1;Ontology_term=GO:0005524,GO:0008887;gbkey=CDS;go_function=ATP binding|0005524||IEA,glycerate kinase activity|0008887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004940256.1;locus_tag=IY40_RS01205;product=glycerate kinase;protein_id=WP_043135683.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 203601 204563 . + . ID=gene-IY40_RS01210;Name=hemH;gbkey=Gene;gene=hemH;gene_biotype=protein_coding;locus_tag=IY40_RS01210;old_locus_tag=IY40_01225 NZ_JPQY01000002.1 Protein Homology CDS 203601 204563 . + 0 ID=cds-WP_004940253.1;Parent=gene-IY40_RS01210;Dbxref=GenBank:WP_004940253.1;Name=WP_004940253.1;Ontology_term=GO:0006779,GO:0004325;gbkey=CDS;gene=hemH;go_function=ferrochelatase activity|0004325||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208599.1;locus_tag=IY40_RS01210;product=ferrochelatase;protein_id=WP_004940253.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 204654 205958 . + . ID=gene-IY40_RS01215;Name=IY40_RS01215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS01215;old_locus_tag=IY40_01230 NZ_JPQY01000002.1 Protein Homology CDS 204654 205958 . + 0 ID=cds-WP_025301797.1;Parent=gene-IY40_RS01215;Dbxref=GenBank:WP_025301797.1;Name=WP_025301797.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308557.1;locus_tag=IY40_RS01215;product=inosine/guanosine kinase;protein_id=WP_025301797.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 206017 207708 . - . ID=gene-IY40_RS01220;Name=ybaL;gbkey=Gene;gene=ybaL;gene_biotype=protein_coding;locus_tag=IY40_RS01220;old_locus_tag=IY40_01235 NZ_JPQY01000002.1 Protein Homology CDS 206017 207708 . - 0 ID=cds-WP_025301798.1;Parent=gene-IY40_RS01220;Dbxref=GenBank:WP_025301798.1;Name=WP_025301798.1;Ontology_term=GO:0006813,GO:0008324,GO:0051139,GO:0016020;gbkey=CDS;gene=ybaL;go_component=membrane|0016020||IEA;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA,metal cation:proton antiporter activity|0051139||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015683715.1;locus_tag=IY40_RS01220;product=YbaL family putative K(+) efflux transporter;protein_id=WP_025301798.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 207954 209174 . - . ID=gene-IY40_RS01225;Name=IY40_RS01225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS01225;old_locus_tag=IY40_01240 NZ_JPQY01000002.1 Protein Homology CDS 207954 209174 . - 0 ID=cds-WP_043135686.1;Parent=gene-IY40_RS01225;Dbxref=GenBank:WP_043135686.1;Name=WP_043135686.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004949392.1;locus_tag=IY40_RS01225;product=MFS transporter;protein_id=WP_043135686.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 209353 211005 . + . ID=gene-IY40_RS01230;Name=ushA;gbkey=Gene;gene=ushA;gene_biotype=protein_coding;locus_tag=IY40_RS01230;old_locus_tag=IY40_01245 NZ_JPQY01000002.1 Protein Homology CDS 209353 211005 . + 0 ID=cds-WP_025301800.1;Parent=gene-IY40_RS01230;Dbxref=GenBank:WP_025301800.1;Name=WP_025301800.1;Ontology_term=GO:0009166,GO:0000166,GO:0016787,GO:0046872;gbkey=CDS;gene=ushA;go_function=nucleotide binding|0000166||IEA,hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;go_process=nucleotide catabolic process|0009166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005167760.1;locus_tag=IY40_RS01230;product=bifunctional UDP-sugar hydrolase/5'-nucleotidase UshA;protein_id=WP_025301800.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 211114 211881 . - . ID=gene-IY40_RS01235;Name=IY40_RS01235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS01235;old_locus_tag=IY40_01250 NZ_JPQY01000002.1 Protein Homology CDS 211114 211881 . - 0 ID=cds-WP_043135689.1;Parent=gene-IY40_RS01235;Dbxref=GenBank:WP_043135689.1;Name=WP_043135689.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004953082.1;locus_tag=IY40_RS01235;product=AraC family transcriptional regulator;protein_id=WP_043135689.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 211982 213145 . + . ID=gene-IY40_RS01240;Name=IY40_RS01240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS01240;old_locus_tag=IY40_01255 NZ_JPQY01000002.1 Protein Homology CDS 211982 213145 . + 0 ID=cds-WP_043135691.1;Parent=gene-IY40_RS01240;Dbxref=GenBank:WP_043135691.1;Name=WP_043135691.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019454154.1;locus_tag=IY40_RS01240;product=multidrug effflux MFS transporter;protein_id=WP_043135691.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 213238 214704 . + . ID=gene-IY40_RS01245;Name=dacB;gbkey=Gene;gene=dacB;gene_biotype=protein_coding;locus_tag=IY40_RS01245;old_locus_tag=IY40_01260 NZ_JPQY01000002.1 Protein Homology CDS 213238 214704 . + 0 ID=cds-WP_043135694.1;Parent=gene-IY40_RS01245;Dbxref=GenBank:WP_043135694.1;Name=WP_043135694.1;Ontology_term=GO:0009252,GO:0004175,GO:0009002;gbkey=CDS;gene=dacB;go_function=endopeptidase activity|0004175||IEA,serine-type D-Ala-D-Ala carboxypeptidase activity|0009002||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019454153.1;locus_tag=IY40_RS01245;product=D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine endopeptidase;protein_id=WP_043135694.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 214715 215194 . - . ID=gene-IY40_RS01250;Name=ybaK;gbkey=Gene;gene=ybaK;gene_biotype=protein_coding;locus_tag=IY40_RS01250;old_locus_tag=IY40_01265 NZ_JPQY01000002.1 Protein Homology CDS 214715 215194 . - 0 ID=cds-WP_004940240.1;Parent=gene-IY40_RS01250;Dbxref=GenBank:WP_004940240.1;Name=WP_004940240.1;Ontology_term=GO:0002161;gbkey=CDS;gene=ybaK;go_function=aminoacyl-tRNA deacylase activity|0002161||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225510.1;locus_tag=IY40_RS01250;product=Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK;protein_id=WP_004940240.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 215423 216229 . - . ID=gene-IY40_RS01255;Name=IY40_RS01255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS01255;old_locus_tag=IY40_01270 NZ_JPQY01000002.1 Protein Homology CDS 215423 216229 . - 0 ID=cds-WP_025301805.1;Parent=gene-IY40_RS01255;Dbxref=GenBank:WP_025301805.1;Name=WP_025301805.1;Ontology_term=GO:0008233;gbkey=CDS;go_function=peptidase activity|0008233||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019454151.1;locus_tag=IY40_RS01255;product=TraB/GumN family protein;protein_id=WP_025301805.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 216363 219074 . - . ID=gene-IY40_RS01260;Name=copA;gbkey=Gene;gene=copA;gene_biotype=protein_coding;locus_tag=IY40_RS01260;old_locus_tag=IY40_01275 NZ_JPQY01000002.1 Protein Homology CDS 216363 219074 . - 0 ID=cds-WP_043135703.1;Parent=gene-IY40_RS01260;Dbxref=GenBank:WP_043135703.1;Name=WP_043135703.1;Ontology_term=GO:0006812,GO:0019829;gbkey=CDS;gene=copA;go_function=ATPase-coupled monoatomic cation transmembrane transporter activity|0019829||IEA;go_process=monoatomic cation transport|0006812||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012413530.1;locus_tag=IY40_RS01260;product=copper-exporting P-type ATPase CopA;protein_id=WP_043135703.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 219182 219583 . + . ID=gene-IY40_RS01265;Name=cueR;gbkey=Gene;gene=cueR;gene_biotype=protein_coding;locus_tag=IY40_RS01265;old_locus_tag=IY40_01280 NZ_JPQY01000002.1 Protein Homology CDS 219182 219583 . + 0 ID=cds-WP_025301807.1;Parent=gene-IY40_RS01265;Dbxref=GenBank:WP_025301807.1;Name=WP_025301807.1;Ontology_term=GO:0045893,GO:0046688,GO:0003677,GO:0003700,GO:0005507;gbkey=CDS;gene=cueR;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,copper ion binding|0005507||IEA;go_process=positive regulation of DNA-templated transcription|0045893||IEA,response to copper ion|0046688||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019454137.1;locus_tag=IY40_RS01265;product=Cu(I)-responsive transcriptional regulator;protein_id=WP_025301807.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 219580 220041 . - . ID=gene-IY40_RS01270;Name=IY40_RS01270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS01270;old_locus_tag=IY40_01285 NZ_JPQY01000002.1 Protein Homology CDS 219580 220041 . - 0 ID=cds-WP_025301808.1;Parent=gene-IY40_RS01270;Dbxref=GenBank:WP_025301808.1;Name=WP_025301808.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016928811.1;locus_tag=IY40_RS01270;product=NfeD family protein;protein_id=WP_025301808.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 220044 220949 . - . ID=gene-IY40_RS01275;Name=IY40_RS01275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS01275;old_locus_tag=IY40_01290 NZ_JPQY01000002.1 Protein Homology CDS 220044 220949 . - 0 ID=cds-WP_004940203.1;Parent=gene-IY40_RS01275;Dbxref=GenBank:WP_004940203.1;Name=WP_004940203.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017891872.1;locus_tag=IY40_RS01275;product=SPFH domain-containing protein;protein_id=WP_004940203.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 221270 222421 . + . ID=gene-IY40_RS01280;Name=cfa;gbkey=Gene;gene=cfa;gene_biotype=protein_coding;locus_tag=IY40_RS01280;old_locus_tag=IY40_01295 NZ_JPQY01000002.1 Protein Homology CDS 221270 222421 . + 0 ID=cds-WP_043135706.1;Parent=gene-IY40_RS01280;Dbxref=GenBank:WP_043135706.1;Name=WP_043135706.1;gbkey=CDS;gene=cfa;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013811805.1;locus_tag=IY40_RS01280;product=cyclopropane fatty acyl phospholipid synthase;protein_id=WP_043135706.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 222534 223388 . - . ID=gene-IY40_RS01285;Name=IY40_RS01285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS01285;old_locus_tag=IY40_01300 NZ_JPQY01000002.1 Protein Homology CDS 222534 223388 . - 0 ID=cds-WP_025301810.1;Parent=gene-IY40_RS01285;Dbxref=GenBank:WP_025301810.1;Name=WP_025301810.1;Ontology_term=GO:0006457,GO:0034599,GO:0005515,GO:0051082;gbkey=CDS;go_function=protein binding|0005515||IEA,unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA,cellular response to oxidative stress|0034599||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006322321.1;locus_tag=IY40_RS01285;product=co-chaperone YbbN;protein_id=WP_025301810.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 223466 224242 . - . ID=gene-IY40_RS01290;Name=IY40_RS01290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS01290;old_locus_tag=IY40_01305 NZ_JPQY01000002.1 Protein Homology CDS 223466 224242 . - 0 ID=cds-WP_004940195.1;Parent=gene-IY40_RS01290;Dbxref=GenBank:WP_004940195.1;Name=WP_004940195.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019081255.1;locus_tag=IY40_RS01290;product=SDR family oxidoreductase;protein_id=WP_004940195.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 224269 224907 . - . ID=gene-IY40_RS01295;Name=tesA;gbkey=Gene;gene=tesA;gene_biotype=protein_coding;locus_tag=IY40_RS01295;old_locus_tag=IY40_01310 NZ_JPQY01000002.1 Protein Homology CDS 224269 224907 . - 0 ID=cds-WP_161781779.1;Parent=gene-IY40_RS01295;Dbxref=GenBank:WP_161781779.1;Name=WP_161781779.1;Ontology_term=GO:0006629,GO:0016298;gbkey=CDS;gene=tesA;go_function=lipase activity|0016298||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004940194.1;locus_tag=IY40_RS01295;product=multifunctional acyl-CoA thioesterase I/protease I/lysophospholipase L1;protein_id=WP_161781779.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 224878 225564 . + . ID=gene-IY40_RS01300;Name=ybbA;gbkey=Gene;gene=ybbA;gene_biotype=protein_coding;locus_tag=IY40_RS01300;old_locus_tag=IY40_01315 NZ_JPQY01000002.1 Protein Homology CDS 224878 225564 . + 0 ID=cds-WP_025301812.1;Parent=gene-IY40_RS01300;Dbxref=GenBank:WP_025301812.1;Name=WP_025301812.1;gbkey=CDS;gene=ybbA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013508191.1;locus_tag=IY40_RS01300;product=putative ABC transporter ATP-binding protein YbbA;protein_id=WP_025301812.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 225561 227993 . + . ID=gene-IY40_RS01305;Name=ybbP;gbkey=Gene;gene=ybbP;gene_biotype=protein_coding;locus_tag=IY40_RS01305;old_locus_tag=IY40_01320 NZ_JPQY01000002.1 Protein Homology CDS 225561 227993 . + 0 ID=cds-WP_043135711.1;Parent=gene-IY40_RS01305;Dbxref=GenBank:WP_043135711.1;Name=WP_043135711.1;gbkey=CDS;gene=ybbP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013811809.1;locus_tag=IY40_RS01305;product=putative ABC transporter permease subunit YbbP;protein_id=WP_043135711.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 228351 229757 . + . ID=gene-IY40_RS01310;Name=IY40_RS01310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS01310;old_locus_tag=IY40_01330 NZ_JPQY01000002.1 Protein Homology CDS 228351 229757 . + 0 ID=cds-WP_043135713.1;Parent=gene-IY40_RS01310;Dbxref=GenBank:WP_043135713.1;Name=WP_043135713.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004846806.1;locus_tag=IY40_RS01310;product=sugar porter family MFS transporter;protein_id=WP_043135713.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 229821 230888 . - . ID=gene-IY40_RS01315;Name=purK;gbkey=Gene;gene=purK;gene_biotype=protein_coding;locus_tag=IY40_RS01315;old_locus_tag=IY40_01335 NZ_JPQY01000002.1 Protein Homology CDS 229821 230888 . - 0 ID=cds-WP_043135716.1;Parent=gene-IY40_RS01315;Dbxref=GenBank:WP_043135716.1;Name=WP_043135716.1;Ontology_term=GO:0006189,GO:0004638,GO:0005524,GO:0046872;gbkey=CDS;gene=purK;go_function=phosphoribosylaminoimidazole carboxylase activity|0004638||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015376911.1;locus_tag=IY40_RS01315;product=5-(carboxyamino)imidazole ribonucleotide synthase;protein_id=WP_043135716.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 230885 231409 . - . ID=gene-IY40_RS01320;Name=purE;gbkey=Gene;gene=purE;gene_biotype=protein_coding;locus_tag=IY40_RS01320;old_locus_tag=IY40_01340 NZ_JPQY01000002.1 Protein Homology CDS 230885 231409 . - 0 ID=cds-WP_016928802.1;Parent=gene-IY40_RS01320;Dbxref=GenBank:WP_016928802.1;Name=WP_016928802.1;Ontology_term=GO:0006189,GO:0009152,GO:0004638,GO:0009320;gbkey=CDS;gene=purE;go_component=phosphoribosylaminoimidazole carboxylase complex|0009320||IEA;go_function=phosphoribosylaminoimidazole carboxylase activity|0004638||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA,purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208569.1;locus_tag=IY40_RS01320;product=5-(carboxyamino)imidazole ribonucleotide mutase;protein_id=WP_016928802.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 231559 232281 . - . ID=gene-IY40_RS01325;Name=IY40_RS01325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS01325;old_locus_tag=IY40_01345 NZ_JPQY01000002.1 Protein Homology CDS 231559 232281 . - 0 ID=cds-WP_043135719.1;Parent=gene-IY40_RS01325;Dbxref=GenBank:WP_043135719.1;Name=WP_043135719.1;Ontology_term=GO:0009245,GO:0016462;gbkey=CDS;go_function=pyrophosphatase activity|0016462||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012005603.1;locus_tag=IY40_RS01325;product=UDP-2%2C3-diacylglucosamine diphosphatase;protein_id=WP_043135719.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 232292 232786 . - . ID=gene-IY40_RS01330;Name=ppiB;gbkey=Gene;gene=ppiB;gene_biotype=protein_coding;locus_tag=IY40_RS01330;old_locus_tag=IY40_01350 NZ_JPQY01000002.1 Protein Homology CDS 232292 232786 . - 0 ID=cds-WP_025301816.1;Parent=gene-IY40_RS01330;Dbxref=GenBank:WP_025301816.1;Name=WP_025301816.1;gbkey=CDS;gene=ppiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308614.1;locus_tag=IY40_RS01330;product=peptidylprolyl isomerase B;protein_id=WP_025301816.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 233095 234480 . + . ID=gene-IY40_RS01335;Name=cysS;gbkey=Gene;gene=cysS;gene_biotype=protein_coding;locus_tag=IY40_RS01335;old_locus_tag=IY40_01355 NZ_JPQY01000002.1 Protein Homology CDS 233095 234480 . + 0 ID=cds-WP_033637393.1;Parent=gene-IY40_RS01335;Dbxref=GenBank:WP_033637393.1;Name=WP_033637393.1;Ontology_term=GO:0006423,GO:0004817,GO:0005524,GO:0005737;gbkey=CDS;gene=cysS;go_component=cytoplasm|0005737||IEA;go_function=cysteine-tRNA ligase activity|0004817||IEA,ATP binding|0005524||IEA;go_process=cysteinyl-tRNA aminoacylation|0006423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005125243.1;locus_tag=IY40_RS01335;product=cysteine--tRNA ligase;protein_id=WP_033637393.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 234542 234754 . - . ID=gene-IY40_RS01340;Name=ybcJ;gbkey=Gene;gene=ybcJ;gene_biotype=protein_coding;locus_tag=IY40_RS01340;old_locus_tag=IY40_01360 NZ_JPQY01000002.1 Protein Homology CDS 234542 234754 . - 0 ID=cds-WP_043135722.1;Parent=gene-IY40_RS01340;Dbxref=GenBank:WP_043135722.1;Name=WP_043135722.1;gbkey=CDS;gene=ybcJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006322341.1;locus_tag=IY40_RS01340;product=ribosome-associated protein YbcJ;protein_id=WP_043135722.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 234765 235631 . - . ID=gene-IY40_RS01345;Name=folD;gbkey=Gene;gene=folD;gene_biotype=protein_coding;locus_tag=IY40_RS01345;old_locus_tag=IY40_01365 NZ_JPQY01000002.1 Protein Homology CDS 234765 235631 . - 0 ID=cds-WP_016928798.1;Parent=gene-IY40_RS01345;Dbxref=GenBank:WP_016928798.1;Name=WP_016928798.1;Ontology_term=GO:0004488;gbkey=CDS;gene=folD;go_function=methylenetetrahydrofolate dehydrogenase (NADP+) activity|0004488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004954407.1;locus_tag=IY40_RS01345;product=bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD;protein_id=WP_016928798.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 235837 236046 . + . ID=gene-IY40_RS01350;Name=IY40_RS01350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS01350;old_locus_tag=IY40_01370 NZ_JPQY01000002.1 Protein Homology CDS 235837 236046 . + 0 ID=cds-WP_025301819.1;Parent=gene-IY40_RS01350;Dbxref=GenBank:WP_025301819.1;Name=WP_025301819.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006322345.1;locus_tag=IY40_RS01350;product=hypothetical protein;protein_id=WP_025301819.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 236043 236339 . + . ID=gene-IY40_RS01355;Name=IY40_RS01355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS01355;old_locus_tag=IY40_01375 NZ_JPQY01000002.1 GeneMarkS-2+ CDS 236043 236339 . + 0 ID=cds-WP_043135724.1;Parent=gene-IY40_RS01355;Dbxref=GenBank:WP_043135724.1;Name=WP_043135724.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IY40_RS01355;product=hypothetical protein;protein_id=WP_043135724.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 236436 236512 . + . ID=gene-IY40_RS01360;Name=IY40_RS01360;gbkey=Gene;gene_biotype=tRNA;locus_tag=IY40_RS01360;old_locus_tag=IY40_01380 NZ_JPQY01000002.1 tRNAscan-SE tRNA 236436 236512 . + . ID=rna-IY40_RS01360;Parent=gene-IY40_RS01360;anticodon=(pos:236470..236472);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=IY40_RS01360;product=tRNA-Arg NZ_JPQY01000002.1 tRNAscan-SE exon 236436 236512 . + . ID=exon-IY40_RS01360-1;Parent=rna-IY40_RS01360;anticodon=(pos:236470..236472);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=IY40_RS01360;product=tRNA-Arg NZ_JPQY01000002.1 RefSeq gene 236646 236972 . + . ID=gene-IY40_RS01365;Name=IY40_RS01365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS01365;old_locus_tag=IY40_01385 NZ_JPQY01000002.1 Protein Homology CDS 236646 236972 . + 0 ID=cds-WP_025301820.1;Parent=gene-IY40_RS01365;Dbxref=GenBank:WP_025301820.1;Name=WP_025301820.1;Ontology_term=GO:0061929;gbkey=CDS;go_function=gamma-glutamylaminecyclotransferase activity|0061929||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010671873.1;locus_tag=IY40_RS01365;product=gamma-glutamylcyclotransferase family protein;protein_id=WP_025301820.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 237082 237225 . + . ID=gene-IY40_RS26335;Name=IY40_RS26335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS26335 NZ_JPQY01000002.1 Protein Homology CDS 237082 237225 . + 0 ID=cds-WP_016928795.1;Parent=gene-IY40_RS26335;Dbxref=GenBank:WP_016928795.1;Name=WP_016928795.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015376917.1;locus_tag=IY40_RS26335;product=hypothetical protein;protein_id=WP_016928795.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 237351 238883 . + . ID=gene-IY40_RS01370;Name=IY40_RS01370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS01370;old_locus_tag=IY40_01395 NZ_JPQY01000002.1 Protein Homology CDS 237351 238883 . + 0 ID=cds-WP_043135729.1;Parent=gene-IY40_RS01370;Dbxref=GenBank:WP_043135729.1;Name=WP_043135729.1;Ontology_term=GO:0009101,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=glycoprotein biosynthetic process|0009101||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016928794.1;locus_tag=IY40_RS01370;product=glycosyltransferase family 39 protein;protein_id=WP_043135729.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 239211 239762 . + . ID=gene-IY40_RS01375;Name=IY40_RS01375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS01375;old_locus_tag=IY40_01400 NZ_JPQY01000002.1 Protein Homology CDS 239211 239762 . + 0 ID=cds-WP_004940045.1;Parent=gene-IY40_RS01375;Dbxref=GenBank:WP_004940045.1;Name=WP_004940045.1;Ontology_term=GO:0009055,GO:0010181;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012005619.1;locus_tag=IY40_RS01375;product=flavodoxin family protein;protein_id=WP_004940045.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 240393 241841 . + . ID=gene-IY40_RS01380;Name=IY40_RS01380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS01380;old_locus_tag=IY40_01405 NZ_JPQY01000002.1 Protein Homology CDS 240393 241841 . + 0 ID=cds-WP_038628979.1;Parent=gene-IY40_RS01380;Dbxref=GenBank:WP_038628979.1;Name=WP_038628979.1;Ontology_term=GO:0009966,GO:0009975;gbkey=CDS;go_function=cyclase activity|0009975||IEA;go_process=regulation of signal transduction|0009966||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004949533.1;locus_tag=IY40_RS01380;product=GGDEF domain-containing protein;protein_id=WP_038628979.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 241848 242009 . - . ID=gene-IY40_RS26445;Name=IY40_RS26445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS26445 NZ_JPQY01000002.1 Protein Homology CDS 241848 242009 . - 0 ID=cds-WP_015376921.1;Parent=gene-IY40_RS26445;Dbxref=GenBank:WP_015376921.1;Name=WP_015376921.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF038384.1;locus_tag=IY40_RS26445;product=YnfU family zinc-binding protein;protein_id=WP_015376921.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 242091 242570 . - . ID=gene-IY40_RS01385;Name=IY40_RS01385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS01385;old_locus_tag=IY40_01410 NZ_JPQY01000002.1 Protein Homology CDS 242091 242570 . - 0 ID=cds-WP_025301823.1;Parent=gene-IY40_RS01385;Dbxref=GenBank:WP_025301823.1;Name=WP_025301823.1;Ontology_term=GO:0003676;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004700830.1;locus_tag=IY40_RS01385;product=cold-shock protein;protein_id=WP_025301823.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 242737 243246 . + . ID=gene-IY40_RS01390;Name=IY40_RS01390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS01390;old_locus_tag=IY40_01415 NZ_JPQY01000002.1 Protein Homology CDS 242737 243246 . + 0 ID=cds-WP_043135732.1;Parent=gene-IY40_RS01390;Dbxref=GenBank:WP_043135732.1;Name=WP_043135732.1;Ontology_term=GO:0003824,GO:0046872;gbkey=CDS;go_function=catalytic activity|0003824||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004940041.1;locus_tag=IY40_RS01390;product=VOC family protein;protein_id=WP_043135732.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 243283 244110 . - . ID=gene-IY40_RS01395;Name=IY40_RS01395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS01395;old_locus_tag=IY40_01420 NZ_JPQY01000002.1 Protein Homology CDS 243283 244110 . - 0 ID=cds-WP_025301825.1;Parent=gene-IY40_RS01395;Dbxref=GenBank:WP_025301825.1;Name=WP_025301825.1;Ontology_term=GO:0005524,GO:0015424,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ABC-type amino acid transporter activity|0015424||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015376924.1;locus_tag=IY40_RS01395;product=amino acid ABC transporter ATP-binding protein;protein_id=WP_025301825.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 244120 245007 . - . ID=gene-IY40_RS01400;Name=IY40_RS01400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS01400;old_locus_tag=IY40_01425 NZ_JPQY01000002.1 Protein Homology CDS 244120 245007 . - 0 ID=cds-WP_019454099.1;Parent=gene-IY40_RS01400;Dbxref=GenBank:WP_019454099.1;Name=WP_019454099.1;Ontology_term=GO:0006865,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004940038.1;locus_tag=IY40_RS01400;product=amino acid ABC transporter permease;protein_id=WP_019454099.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 245038 245565 . - . ID=gene-IY40_RS01405;Name=IY40_RS01405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS01405;old_locus_tag=IY40_01430 NZ_JPQY01000002.1 Protein Homology CDS 245038 245565 . - 0 ID=cds-WP_043135734.1;Parent=gene-IY40_RS01405;Dbxref=GenBank:WP_043135734.1;Name=WP_043135734.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013811859.1;locus_tag=IY40_RS01405;product=GNAT family N-acetyltransferase;protein_id=WP_043135734.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 245575 246495 . - . ID=gene-IY40_RS01410;Name=IY40_RS01410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS01410;old_locus_tag=IY40_01435 NZ_JPQY01000002.1 Protein Homology CDS 245575 246495 . - 0 ID=cds-WP_043135736.1;Parent=gene-IY40_RS01410;Dbxref=GenBank:WP_043135736.1;Name=WP_043135736.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019454097.1;locus_tag=IY40_RS01410;product=ABC transporter substrate-binding protein;protein_id=WP_043135736.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 246522 247847 . - . ID=gene-IY40_RS01415;Name=IY40_RS01415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS01415;old_locus_tag=IY40_01440 NZ_JPQY01000002.1 Protein Homology CDS 246522 247847 . - 0 ID=cds-WP_043135739.1;Parent=gene-IY40_RS01415;Dbxref=GenBank:WP_043135739.1;Name=WP_043135739.1;Ontology_term=GO:0010181,GO:0016491;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004949549.1;locus_tag=IY40_RS01415;product=LLM class flavin-dependent oxidoreductase;protein_id=WP_043135739.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 248037 249200 . - . ID=gene-IY40_RS01420;Name=IY40_RS01420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS01420;old_locus_tag=IY40_01445 NZ_JPQY01000002.1 Protein Homology CDS 248037 249200 . - 0 ID=cds-WP_043135741.1;Parent=gene-IY40_RS01420;Dbxref=GenBank:WP_043135741.1;Name=WP_043135741.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006324065.1;locus_tag=IY40_RS01420;product=M20 peptidase aminoacylase family protein;protein_id=WP_043135741.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 249547 249756 . + . ID=gene-IY40_RS01425;Name=cspE;gbkey=Gene;gene=cspE;gene_biotype=protein_coding;gene_synonym=gicA,msmC;locus_tag=IY40_RS01425;old_locus_tag=IY40_01450 NZ_JPQY01000002.1 Protein Homology CDS 249547 249756 . + 0 ID=cds-WP_004940030.1;Parent=gene-IY40_RS01425;Dbxref=GenBank:WP_004940030.1;Name=WP_004940030.1;Ontology_term=GO:0031564,GO:0001072,GO:0003697,GO:0003723;gbkey=CDS;gene=cspE;go_function=transcription antitermination factor activity%2C RNA binding|0001072||IEA,single-stranded DNA binding|0003697||IEA,RNA binding|0003723||IEA;go_process=transcription antitermination|0031564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459621.1;locus_tag=IY40_RS01425;product=transcription antiterminator/RNA stability regulator CspE;protein_id=WP_004940030.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 249814 251004 . - . ID=gene-IY40_RS01430;Name=IY40_RS01430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS01430;old_locus_tag=IY40_01455 NZ_JPQY01000002.1 Protein Homology CDS 249814 251004 . - 0 ID=cds-WP_043135743.1;Parent=gene-IY40_RS01430;Dbxref=GenBank:WP_043135743.1;Name=WP_043135743.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016928785.1;locus_tag=IY40_RS01430;product=multidrug effflux MFS transporter;protein_id=WP_043135743.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 251011 251607 . - . ID=gene-IY40_RS01435;Name=IY40_RS01435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS01435;old_locus_tag=IY40_01460 NZ_JPQY01000002.1 Protein Homology CDS 251011 251607 . - 0 ID=cds-WP_025301831.1;Parent=gene-IY40_RS01435;Dbxref=GenBank:WP_025301831.1;Name=WP_025301831.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004940026.1;locus_tag=IY40_RS01435;product=TetR/AcrR family transcriptional regulator;protein_id=WP_025301831.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 251896 252279 . - . ID=gene-IY40_RS01440;Name=crcB;gbkey=Gene;gene=crcB;gene_biotype=protein_coding;locus_tag=IY40_RS01440;old_locus_tag=IY40_01470 NZ_JPQY01000002.1 Protein Homology CDS 251896 252279 . - 0 ID=cds-WP_016928782.1;Parent=gene-IY40_RS01440;Dbxref=GenBank:WP_016928782.1;Name=WP_016928782.1;Ontology_term=GO:0016020;gbkey=CDS;gene=crcB;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013811865.1;locus_tag=IY40_RS01440;product=fluoride efflux transporter CrcB;protein_id=WP_016928782.1;transl_table=11 NZ_JPQY01000002.1 cmsearch riboswitch 252359 252421 . - . ID=id-NZ_JPQY01000002.1:252359..252421;Dbxref=RFAM:RF01734;Note=Fluoride riboswitches increase expression of downstream genes that help mitigate the toxic effects of very high levels of fluoride%3B They are found in a wide variety of bacteria and archaea;bound_moiety=fluoride;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_JPQY01000002.1 RefSeq gene 252504 252932 . + . ID=gene-IY40_RS01445;Name=IY40_RS01445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS01445;old_locus_tag=IY40_01475 NZ_JPQY01000002.1 Protein Homology CDS 252504 252932 . + 0 ID=cds-WP_025301832.1;Parent=gene-IY40_RS01445;Dbxref=GenBank:WP_025301832.1;Name=WP_025301832.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015376931.1;locus_tag=IY40_RS01445;product=GNAT family N-acetyltransferase;protein_id=WP_025301832.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 252934 254001 . - . ID=gene-IY40_RS01450;Name=IY40_RS01450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS01450;old_locus_tag=IY40_01480 NZ_JPQY01000002.1 Protein Homology CDS 252934 254001 . - 0 ID=cds-WP_043135746.1;Parent=gene-IY40_RS01450;Dbxref=GenBank:WP_043135746.1;Name=WP_043135746.1;Ontology_term=GO:0009966,GO:0009975;gbkey=CDS;go_function=cyclase activity|0009975||IEA;go_process=regulation of signal transduction|0009966||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016928780.1;locus_tag=IY40_RS01450;product=diguanylate cyclase;protein_id=WP_043135746.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 254220 254435 . + . ID=gene-IY40_RS01455;Name=tatA;gbkey=Gene;gene=tatA;gene_biotype=protein_coding;locus_tag=IY40_RS01455;old_locus_tag=IY40_01485 NZ_JPQY01000002.1 Protein Homology CDS 254220 254435 . + 0 ID=cds-WP_025301834.1;Parent=gene-IY40_RS01455;Dbxref=GenBank:WP_025301834.1;Name=WP_025301834.1;gbkey=CDS;gene=tatA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012005633.1;locus_tag=IY40_RS01455;product=Sec-independent protein translocase subunit TatA;protein_id=WP_025301834.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 254529 255494 . - . ID=gene-IY40_RS01460;Name=lipA;gbkey=Gene;gene=lipA;gene_biotype=protein_coding;locus_tag=IY40_RS01460;old_locus_tag=IY40_01490 NZ_JPQY01000002.1 Protein Homology CDS 254529 255494 . - 0 ID=cds-WP_025301835.1;Parent=gene-IY40_RS01460;Dbxref=GenBank:WP_025301835.1;Name=WP_025301835.1;Ontology_term=GO:0009107,GO:0016992,GO:0051539,GO:1904047;gbkey=CDS;gene=lipA;go_function=lipoate synthase activity|0016992||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=lipoate biosynthetic process|0009107||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012904980.1;locus_tag=IY40_RS01460;product=lipoyl synthase;protein_id=WP_025301835.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 255487 256155 . - . ID=gene-IY40_RS01465;Name=lipB;gbkey=Gene;gene=lipB;gene_biotype=protein_coding;locus_tag=IY40_RS01465;old_locus_tag=IY40_01495 NZ_JPQY01000002.1 Protein Homology CDS 255487 256155 . - 0 ID=cds-WP_043135750.1;Parent=gene-IY40_RS01465;Dbxref=GenBank:WP_043135750.1;Name=WP_043135750.1;Ontology_term=GO:0009249,GO:0033819;gbkey=CDS;gene=lipB;go_function=lipoyl(octanoyl) transferase activity|0033819||IEA;go_process=protein lipoylation|0009249||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015376934.1;locus_tag=IY40_RS01465;product=lipoyl(octanoyl) transferase LipB;protein_id=WP_043135750.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 256290 256556 . - . ID=gene-IY40_RS01470;Name=ybeD;gbkey=Gene;gene=ybeD;gene_biotype=protein_coding;locus_tag=IY40_RS01470;old_locus_tag=IY40_01500 NZ_JPQY01000002.1 Protein Homology CDS 256290 256556 . - 0 ID=cds-WP_004940012.1;Parent=gene-IY40_RS01470;Dbxref=GenBank:WP_004940012.1;Name=WP_004940012.1;gbkey=CDS;gene=ybeD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015671288.1;locus_tag=IY40_RS01470;product=DUF493 family protein YbeD;protein_id=WP_004940012.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 256661 257872 . - . ID=gene-IY40_RS01475;Name=dacA;gbkey=Gene;gene=dacA;gene_biotype=protein_coding;locus_tag=IY40_RS01475;old_locus_tag=IY40_01505 NZ_JPQY01000002.1 Protein Homology CDS 256661 257872 . - 0 ID=cds-WP_004940010.1;Parent=gene-IY40_RS01475;Dbxref=GenBank:WP_004940010.1;Name=WP_004940010.1;Ontology_term=GO:0006508,GO:0009002;gbkey=CDS;gene=dacA;go_function=serine-type D-Ala-D-Ala carboxypeptidase activity|0009002||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005182716.1;locus_tag=IY40_RS01475;product=D-alanyl-D-alanine carboxypeptidase DacA;protein_id=WP_004940010.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 258053 259138 . - . ID=gene-IY40_RS01480;Name=rlpA;gbkey=Gene;gene=rlpA;gene_biotype=protein_coding;locus_tag=IY40_RS01480;old_locus_tag=IY40_01510 NZ_JPQY01000002.1 Protein Homology CDS 258053 259138 . - 0 ID=cds-WP_025301837.1;Parent=gene-IY40_RS01480;Dbxref=GenBank:WP_025301837.1;Name=WP_025301837.1;Ontology_term=GO:0042834;gbkey=CDS;gene=rlpA;go_function=peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012005637.1;locus_tag=IY40_RS01480;product=endolytic peptidoglycan transglycosylase RlpA;protein_id=WP_025301837.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 259149 260261 . - . ID=gene-IY40_RS01485;Name=mrdB;gbkey=Gene;gene=mrdB;gene_biotype=protein_coding;gene_synonym=rodA;locus_tag=IY40_RS01485;old_locus_tag=IY40_01515 NZ_JPQY01000002.1 Protein Homology CDS 259149 260261 . - 0 ID=cds-WP_004940006.1;Parent=gene-IY40_RS01485;Dbxref=GenBank:WP_004940006.1;Name=WP_004940006.1;Note=rod shape-determining protein RodA;gbkey=CDS;gene=mrdB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004716309.1;locus_tag=IY40_RS01485;product=peptidoglycan glycosyltransferase MrdB;protein_id=WP_004940006.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 260270 262165 . - . ID=gene-IY40_RS01490;Name=mrdA;gbkey=Gene;gene=mrdA;gene_biotype=protein_coding;locus_tag=IY40_RS01490;old_locus_tag=IY40_01520 NZ_JPQY01000002.1 Protein Homology CDS 260270 262165 . - 0 ID=cds-WP_025301838.1;Parent=gene-IY40_RS01490;Dbxref=GenBank:WP_025301838.1;Name=WP_025301838.1;Ontology_term=GO:0009252,GO:0008658,GO:0009002,GO:0016020;gbkey=CDS;gene=mrdA;go_component=membrane|0016020||IEA;go_function=penicillin binding|0008658||IEA,serine-type D-Ala-D-Ala carboxypeptidase activity|0009002||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015683709.1;locus_tag=IY40_RS01490;product=peptidoglycan DD-transpeptidase MrdA;protein_id=WP_025301838.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 262204 262674 . - . ID=gene-IY40_RS01495;Name=rlmH;gbkey=Gene;gene=rlmH;gene_biotype=protein_coding;locus_tag=IY40_RS01495;old_locus_tag=IY40_01525 NZ_JPQY01000002.1 Protein Homology CDS 262204 262674 . - 0 ID=cds-WP_004940002.1;Parent=gene-IY40_RS01495;Dbxref=GenBank:WP_004940002.1;Name=WP_004940002.1;Ontology_term=GO:0006364,GO:0008168;gbkey=CDS;gene=rlmH;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016245807.1;locus_tag=IY40_RS01495;product=23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH;protein_id=WP_004940002.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 262678 262995 . - . ID=gene-IY40_RS01500;Name=rsfS;gbkey=Gene;gene=rsfS;gene_biotype=protein_coding;locus_tag=IY40_RS01500;old_locus_tag=IY40_01530 NZ_JPQY01000002.1 Protein Homology CDS 262678 262995 . - 0 ID=cds-WP_025301839.1;Parent=gene-IY40_RS01500;Dbxref=GenBank:WP_025301839.1;Name=WP_025301839.1;Ontology_term=GO:0017148,GO:0043022;gbkey=CDS;gene=rsfS;go_function=ribosome binding|0043022||IEA;go_process=negative regulation of translation|0017148||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007373852.1;locus_tag=IY40_RS01500;product=ribosome silencing factor;protein_id=WP_025301839.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 263190 263852 . - . ID=gene-IY40_RS01505;Name=nadD;gbkey=Gene;gene=nadD;gene_biotype=protein_coding;locus_tag=IY40_RS01505;old_locus_tag=IY40_01535 NZ_JPQY01000002.1 Protein Homology CDS 263190 263852 . - 0 ID=cds-WP_025301840.1;Parent=gene-IY40_RS01505;Dbxref=GenBank:WP_025301840.1;Name=WP_025301840.1;Ontology_term=GO:0009435,GO:0016779;gbkey=CDS;gene=nadD;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=NAD+ biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017891910.1;locus_tag=IY40_RS01505;product=nicotinate-nucleotide adenylyltransferase;protein_id=WP_025301840.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 263842 264876 . - . ID=gene-IY40_RS01510;Name=holA;gbkey=Gene;gene=holA;gene_biotype=protein_coding;locus_tag=IY40_RS01510;old_locus_tag=IY40_01540 NZ_JPQY01000002.1 Protein Homology CDS 263842 264876 . - 0 ID=cds-WP_043135753.1;Parent=gene-IY40_RS01510;Dbxref=GenBank:WP_043135753.1;Name=WP_043135753.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887;gbkey=CDS;gene=holA;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210331.1;locus_tag=IY40_RS01510;product=DNA polymerase III subunit delta;protein_id=WP_043135753.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 264873 265433 . - . ID=gene-IY40_RS01515;Name=lptE;gbkey=Gene;gene=lptE;gene_biotype=protein_coding;locus_tag=IY40_RS01515;old_locus_tag=IY40_01545 NZ_JPQY01000002.1 Protein Homology CDS 264873 265433 . - 0 ID=cds-WP_043135755.1;Parent=gene-IY40_RS01515;Dbxref=GenBank:WP_043135755.1;Name=WP_043135755.1;Ontology_term=GO:0043165,GO:0019867;gbkey=CDS;gene=lptE;go_component=outer membrane|0019867||IEA;go_process=Gram-negative-bacterium-type cell outer membrane assembly|0043165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012005643.1;locus_tag=IY40_RS01515;product=LPS assembly lipoprotein LptE;protein_id=WP_043135755.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 265448 268030 . - . ID=gene-IY40_RS01520;Name=leuS;gbkey=Gene;gene=leuS;gene_biotype=protein_coding;locus_tag=IY40_RS01520;old_locus_tag=IY40_01550 NZ_JPQY01000002.1 Protein Homology CDS 265448 268030 . - 0 ID=cds-WP_043135757.1;Parent=gene-IY40_RS01520;Dbxref=GenBank:WP_043135757.1;Name=WP_043135757.1;Ontology_term=GO:0006429,GO:0000166,GO:0004823,GO:0005524;gbkey=CDS;gene=leuS;go_function=nucleotide binding|0000166||IEA,leucine-tRNA ligase activity|0004823||IEA,ATP binding|0005524||IEA;go_process=leucyl-tRNA aminoacylation|0006429||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008456064.1;locus_tag=IY40_RS01520;product=leucine--tRNA ligase;protein_id=WP_043135757.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 268316 268798 . + . ID=gene-IY40_RS01525;Name=IY40_RS01525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS01525;old_locus_tag=IY40_01555 NZ_JPQY01000002.1 Protein Homology CDS 268316 268798 . + 0 ID=cds-WP_025301844.1;Parent=gene-IY40_RS01525;Dbxref=GenBank:WP_025301844.1;Name=WP_025301844.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459645.1;locus_tag=IY40_RS01525;product=zinc ribbon-containing protein;protein_id=WP_025301844.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 268839 269543 . - . ID=gene-IY40_RS01530;Name=IY40_RS01530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS01530;old_locus_tag=IY40_01560 NZ_JPQY01000002.1 Protein Homology CDS 268839 269543 . - 0 ID=cds-WP_043135759.1;Parent=gene-IY40_RS01530;Dbxref=GenBank:WP_043135759.1;Name=WP_043135759.1;Ontology_term=GO:0009055,GO:0010181,GO:0016491,GO:0050446;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA,azobenzene reductase (NADP+) activity|0050446||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015376942.1;locus_tag=IY40_RS01530;product=FMN-dependent NADH-azoreductase;protein_id=WP_043135759.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 269692 270624 . - . ID=gene-IY40_RS01535;Name=rihA;gbkey=Gene;gene=rihA;gene_biotype=protein_coding;locus_tag=IY40_RS01535;old_locus_tag=IY40_01565 NZ_JPQY01000002.1 Protein Homology CDS 269692 270624 . - 0 ID=cds-WP_043135761.1;Parent=gene-IY40_RS01535;Dbxref=GenBank:WP_043135761.1;Name=WP_043135761.1;Ontology_term=GO:0006206,GO:0050263;gbkey=CDS;gene=rihA;go_function=ribosylpyrimidine nucleosidase activity|0050263||IEA;go_process=pyrimidine nucleobase metabolic process|0006206||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016928768.1;locus_tag=IY40_RS01535;product=pyrimidine-specific ribonucleoside hydrolase RihA;protein_id=WP_043135761.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 270740 271465 . - . ID=gene-IY40_RS01540;Name=IY40_RS01540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS01540;old_locus_tag=IY40_01570 NZ_JPQY01000002.1 Protein Homology CDS 270740 271465 . - 0 ID=cds-WP_025301847.1;Parent=gene-IY40_RS01540;Dbxref=GenBank:WP_025301847.1;Name=WP_025301847.1;Ontology_term=GO:0005524,GO:0015424,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ABC-type amino acid transporter activity|0015424||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459654.1;locus_tag=IY40_RS01540;product=amino acid ABC transporter ATP-binding protein;protein_id=WP_025301847.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 271465 272139 . - . ID=gene-IY40_RS01545;Name=gltK;gbkey=Gene;gene=gltK;gene_biotype=protein_coding;locus_tag=IY40_RS01545;old_locus_tag=IY40_01575 NZ_JPQY01000002.1 Protein Homology CDS 271465 272139 . - 0 ID=cds-WP_025301848.1;Parent=gene-IY40_RS01545;Dbxref=GenBank:WP_025301848.1;Name=WP_025301848.1;gbkey=CDS;gene=gltK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459655.1;locus_tag=IY40_RS01545;product=glutamate/aspartate ABC transporter permease GltK;protein_id=WP_025301848.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 272139 272879 . - . ID=gene-IY40_RS01550;Name=IY40_RS01550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS01550;old_locus_tag=IY40_01580 NZ_JPQY01000002.1 Protein Homology CDS 272139 272879 . - 0 ID=cds-WP_019454074.1;Parent=gene-IY40_RS01550;Dbxref=GenBank:WP_019454074.1;Name=WP_019454074.1;Ontology_term=GO:0006865,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015698156.1;locus_tag=IY40_RS01550;product=amino acid ABC transporter permease;protein_id=WP_019454074.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 273093 273989 . - . ID=gene-IY40_RS01555;Name=IY40_RS01555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS01555;old_locus_tag=IY40_01585 NZ_JPQY01000002.1 Protein Homology CDS 273093 273989 . - 0 ID=cds-WP_025301849.1;Parent=gene-IY40_RS01555;Dbxref=GenBank:WP_025301849.1;Name=WP_025301849.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013811881.1;locus_tag=IY40_RS01555;product=amino acid ABC transporter substrate-binding protein;protein_id=WP_025301849.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 274382 275911 . - . ID=gene-IY40_RS01560;Name=lnt;gbkey=Gene;gene=lnt;gene_biotype=protein_coding;locus_tag=IY40_RS01560;old_locus_tag=IY40_01590 NZ_JPQY01000002.1 Protein Homology CDS 274382 275911 . - 0 ID=cds-WP_043135765.1;Parent=gene-IY40_RS01560;Dbxref=GenBank:WP_043135765.1;Name=WP_043135765.1;Ontology_term=GO:0042158,GO:0016410,GO:0016020;gbkey=CDS;gene=lnt;go_component=membrane|0016020||IEA;go_function=N-acyltransferase activity|0016410||IEA;go_process=lipoprotein biosynthetic process|0042158||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016928767.1;locus_tag=IY40_RS01560;product=apolipoprotein N-acyltransferase;protein_id=WP_043135765.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 275919 276797 . - . ID=gene-IY40_RS01565;Name=corC;gbkey=Gene;gene=corC;gene_biotype=protein_coding;locus_tag=IY40_RS01565;old_locus_tag=IY40_01595 NZ_JPQY01000002.1 Protein Homology CDS 275919 276797 . - 0 ID=cds-WP_025301851.1;Parent=gene-IY40_RS01565;Dbxref=GenBank:WP_025301851.1;Name=WP_025301851.1;Note=CorC(YbeX) belongs to the Cyclin M Mg2+ Exporter (CNNM) family%2C and was characterized as belonging to a set of three proteins%2C at least one of which must be present for CorA to function.;Ontology_term=GO:0050660;gbkey=CDS;gene=corC;go_function=flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210342.1;locus_tag=IY40_RS01565;product=CNNM family magnesium/cobalt transport protein CorC;protein_id=WP_025301851.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 276883 277356 . - . ID=gene-IY40_RS01570;Name=ybeY;gbkey=Gene;gene=ybeY;gene_biotype=protein_coding;locus_tag=IY40_RS01570;old_locus_tag=IY40_01600 NZ_JPQY01000002.1 Protein Homology CDS 276883 277356 . - 0 ID=cds-WP_016928766.1;Parent=gene-IY40_RS01570;Dbxref=GenBank:WP_016928766.1;Name=WP_016928766.1;Ontology_term=GO:0042254,GO:0004540,GO:0046872;gbkey=CDS;gene=ybeY;go_function=RNA nuclease activity|0004540||IEA,metal ion binding|0046872||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012005654.1;locus_tag=IY40_RS01570;product=rRNA maturation RNase YbeY;protein_id=WP_016928766.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 277353 278408 . - . ID=gene-IY40_RS01575;Name=IY40_RS01575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS01575;old_locus_tag=IY40_01605 NZ_JPQY01000002.1 Protein Homology CDS 277353 278408 . - 0 ID=cds-WP_025301852.1;Parent=gene-IY40_RS01575;Dbxref=GenBank:WP_025301852.1;Name=WP_025301852.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005158426.1;locus_tag=IY40_RS01575;product=PhoH family protein;protein_id=WP_025301852.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 278643 278978 . - . ID=gene-IY40_RS01580;Name=IY40_RS01580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS01580;old_locus_tag=IY40_01610 NZ_JPQY01000002.1 Protein Homology CDS 278643 278978 . - 0 ID=cds-WP_004939967.1;Parent=gene-IY40_RS01580;Dbxref=GenBank:WP_004939967.1;Name=WP_004939967.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313117.1;locus_tag=IY40_RS01580;product=zinc ribbon domain-containing protein YjdM;protein_id=WP_004939967.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 279098 280522 . - . ID=gene-IY40_RS01585;Name=miaB;gbkey=Gene;gene=miaB;gene_biotype=protein_coding;locus_tag=IY40_RS01585;old_locus_tag=IY40_01615 NZ_JPQY01000002.1 Protein Homology CDS 279098 280522 . - 0 ID=cds-WP_025301853.1;Parent=gene-IY40_RS01585;Dbxref=GenBank:WP_025301853.1;Name=WP_025301853.1;Ontology_term=GO:0006400,GO:0016782,GO:0051539,GO:1904047;gbkey=CDS;gene=miaB;go_function=transferase activity%2C transferring sulphur-containing groups|0016782||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015683707.1;locus_tag=IY40_RS01585;product=tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB;protein_id=WP_025301853.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 280720 281901 . + . ID=gene-IY40_RS01590;Name=ubiF;gbkey=Gene;gene=ubiF;gene_biotype=protein_coding;locus_tag=IY40_RS01590;old_locus_tag=IY40_01620 NZ_JPQY01000002.1 Protein Homology CDS 280720 281901 . + 0 ID=cds-WP_043135767.1;Parent=gene-IY40_RS01590;Dbxref=GenBank:WP_043135767.1;Name=WP_043135767.1;Ontology_term=GO:0006744,GO:0016709;gbkey=CDS;gene=ubiF;go_function=oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C NAD(P)H as one donor%2C and incorporation of one atom of oxygen|0016709||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016928763.1;locus_tag=IY40_RS01590;product=3-demethoxyubiquinol 3-hydroxylase;protein_id=WP_043135767.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 281989 282063 . - . ID=gene-IY40_RS01595;Name=IY40_RS01595;gbkey=Gene;gene_biotype=tRNA;locus_tag=IY40_RS01595;old_locus_tag=IY40_01625 NZ_JPQY01000002.1 tRNAscan-SE tRNA 281989 282063 . - . ID=rna-IY40_RS01595;Parent=gene-IY40_RS01595;anticodon=(pos:complement(282029..282031));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=IY40_RS01595;product=tRNA-Gln NZ_JPQY01000002.1 tRNAscan-SE exon 281989 282063 . - . ID=exon-IY40_RS01595-1;Parent=rna-IY40_RS01595;anticodon=(pos:complement(282029..282031));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=IY40_RS01595;product=tRNA-Gln NZ_JPQY01000002.1 RefSeq gene 282068 282144 . - . ID=gene-IY40_RS01600;Name=IY40_RS01600;gbkey=Gene;gene_biotype=tRNA;locus_tag=IY40_RS01600;old_locus_tag=IY40_01630 NZ_JPQY01000002.1 tRNAscan-SE tRNA 282068 282144 . - . ID=rna-IY40_RS01600;Parent=gene-IY40_RS01600;anticodon=(pos:complement(282108..282110));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=IY40_RS01600;product=tRNA-Met NZ_JPQY01000002.1 tRNAscan-SE exon 282068 282144 . - . ID=exon-IY40_RS01600-1;Parent=rna-IY40_RS01600;anticodon=(pos:complement(282108..282110));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=IY40_RS01600;product=tRNA-Met NZ_JPQY01000002.1 RefSeq gene 282186 282260 . - . ID=gene-IY40_RS01605;Name=IY40_RS01605;gbkey=Gene;gene_biotype=tRNA;locus_tag=IY40_RS01605;old_locus_tag=IY40_01635 NZ_JPQY01000002.1 tRNAscan-SE tRNA 282186 282260 . - . ID=rna-IY40_RS01605;Parent=gene-IY40_RS01605;anticodon=(pos:complement(282226..282228));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=IY40_RS01605;product=tRNA-Gln NZ_JPQY01000002.1 tRNAscan-SE exon 282186 282260 . - . ID=exon-IY40_RS01605-1;Parent=rna-IY40_RS01605;anticodon=(pos:complement(282226..282228));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=IY40_RS01605;product=tRNA-Gln NZ_JPQY01000002.1 RefSeq gene 282305 282379 . - . ID=gene-IY40_RS01610;Name=IY40_RS01610;gbkey=Gene;gene_biotype=tRNA;locus_tag=IY40_RS01610;old_locus_tag=IY40_01640 NZ_JPQY01000002.1 tRNAscan-SE tRNA 282305 282379 . - . ID=rna-IY40_RS01610;Parent=gene-IY40_RS01610;anticodon=(pos:complement(282345..282347));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=IY40_RS01610;product=tRNA-Gln NZ_JPQY01000002.1 tRNAscan-SE exon 282305 282379 . - . ID=exon-IY40_RS01610-1;Parent=rna-IY40_RS01610;anticodon=(pos:complement(282345..282347));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=IY40_RS01610;product=tRNA-Gln NZ_JPQY01000002.1 RefSeq gene 282410 282494 . - . ID=gene-IY40_RS01615;Name=IY40_RS01615;gbkey=Gene;gene_biotype=tRNA;locus_tag=IY40_RS01615;old_locus_tag=IY40_01645 NZ_JPQY01000002.1 tRNAscan-SE tRNA 282410 282494 . - . ID=rna-IY40_RS01615;Parent=gene-IY40_RS01615;anticodon=(pos:complement(282458..282460));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=IY40_RS01615;product=tRNA-Leu NZ_JPQY01000002.1 tRNAscan-SE exon 282410 282494 . - . ID=exon-IY40_RS01615-1;Parent=rna-IY40_RS01615;anticodon=(pos:complement(282458..282460));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=IY40_RS01615;product=tRNA-Leu NZ_JPQY01000002.1 RefSeq gene 282511 282587 . - . ID=gene-IY40_RS01620;Name=IY40_RS01620;gbkey=Gene;gene_biotype=tRNA;locus_tag=IY40_RS01620;old_locus_tag=IY40_01650 NZ_JPQY01000002.1 tRNAscan-SE tRNA 282511 282587 . - . ID=rna-IY40_RS01620;Parent=gene-IY40_RS01620;anticodon=(pos:complement(282551..282553));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=IY40_RS01620;product=tRNA-Met NZ_JPQY01000002.1 tRNAscan-SE exon 282511 282587 . - . ID=exon-IY40_RS01620-1;Parent=rna-IY40_RS01620;anticodon=(pos:complement(282551..282553));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=IY40_RS01620;product=tRNA-Met NZ_JPQY01000002.1 RefSeq gene 282806 284470 . - . ID=gene-IY40_RS01625;Name=asnB;gbkey=Gene;gene=asnB;gene_biotype=protein_coding;locus_tag=IY40_RS01625;old_locus_tag=IY40_01655 NZ_JPQY01000002.1 Protein Homology CDS 282806 284470 . - 0 ID=cds-WP_004939961.1;Parent=gene-IY40_RS01625;Dbxref=GenBank:WP_004939961.1;Name=WP_004939961.1;Ontology_term=GO:0070981,GO:0004066;gbkey=CDS;gene=asnB;go_function=asparagine synthase (glutamine-hydrolyzing) activity|0004066||IEA;go_process=L-asparagine biosynthetic process|0070981||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001724523.1;locus_tag=IY40_RS01625;product=asparagine synthase B;protein_id=WP_004939961.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 284754 286196 . - . ID=gene-IY40_RS01630;Name=IY40_RS01630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS01630;old_locus_tag=IY40_01660 NZ_JPQY01000002.1 Protein Homology CDS 284754 286196 . - 0 ID=cds-WP_043135770.1;Parent=gene-IY40_RS01630;Dbxref=GenBank:WP_043135770.1;Name=WP_043135770.1;Ontology_term=GO:0005975,GO:0004553,GO:0030246,GO:0005576;gbkey=CDS;go_component=extracellular region|0005576||IEA;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA,carbohydrate binding|0030246||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016928761.1;locus_tag=IY40_RS01630;product=carbohydrate-binding protein;protein_id=WP_043135770.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 286387 287139 . - . ID=gene-IY40_RS01635;Name=IY40_RS01635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS01635;old_locus_tag=IY40_01665 NZ_JPQY01000002.1 Protein Homology CDS 286387 287139 . - 0 ID=cds-WP_004939957.1;Parent=gene-IY40_RS01635;Dbxref=GenBank:WP_004939957.1;Name=WP_004939957.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004949656.1;locus_tag=IY40_RS01635;product=HAD-IIA family hydrolase;protein_id=WP_004939957.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 287207 288427 . - . ID=gene-IY40_RS01640;Name=nagC;gbkey=Gene;gene=nagC;gene_biotype=protein_coding;gene_synonym=nagR;locus_tag=IY40_RS01640;old_locus_tag=IY40_01670 NZ_JPQY01000002.1 Protein Homology CDS 287207 288427 . - 0 ID=cds-WP_043135773.1;Parent=gene-IY40_RS01640;Dbxref=GenBank:WP_043135773.1;Name=WP_043135773.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;gene=nagC;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012005662.1;locus_tag=IY40_RS01640;product=DNA-binding transcriptional regulator NagC;protein_id=WP_043135773.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 288455 289594 . - . ID=gene-IY40_RS01645;Name=nagA;gbkey=Gene;gene=nagA;gene_biotype=protein_coding;locus_tag=IY40_RS01645;old_locus_tag=IY40_01675 NZ_JPQY01000002.1 Protein Homology CDS 288455 289594 . - 0 ID=cds-WP_025301856.1;Parent=gene-IY40_RS01645;Dbxref=GenBank:WP_025301856.1;Name=WP_025301856.1;Ontology_term=GO:0006044,GO:0008448;gbkey=CDS;gene=nagA;go_function=N-acetylglucosamine-6-phosphate deacetylase activity|0008448||IEA;go_process=N-acetylglucosamine metabolic process|0006044||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015376951.1;locus_tag=IY40_RS01645;product=N-acetylglucosamine-6-phosphate deacetylase;protein_id=WP_025301856.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 289613 290413 . - . ID=gene-IY40_RS01650;Name=nagB;gbkey=Gene;gene=nagB;gene_biotype=protein_coding;locus_tag=IY40_RS01650;old_locus_tag=IY40_01680 NZ_JPQY01000002.1 Protein Homology CDS 289613 290413 . - 0 ID=cds-WP_004939952.1;Parent=gene-IY40_RS01650;Dbxref=GenBank:WP_004939952.1;Name=WP_004939952.1;Ontology_term=GO:0006044,GO:0004342;gbkey=CDS;gene=nagB;go_function=glucosamine-6-phosphate deaminase activity|0004342||IEA;go_process=N-acetylglucosamine metabolic process|0006044||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011171793.1;locus_tag=IY40_RS01650;product=glucosamine-6-phosphate deaminase;protein_id=WP_004939952.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 290748 292784 . + . ID=gene-IY40_RS01655;Name=nagE;gbkey=Gene;gene=nagE;gene_biotype=protein_coding;locus_tag=IY40_RS01655;old_locus_tag=IY40_01685 NZ_JPQY01000002.1 Protein Homology CDS 290748 292784 . + 0 ID=cds-WP_025301857.1;Parent=gene-IY40_RS01655;Dbxref=GenBank:WP_025301857.1;Name=WP_025301857.1;Ontology_term=GO:0009401,GO:0008982,GO:0015572,GO:0016020;gbkey=CDS;gene=nagE;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA,N-acetylglucosamine transmembrane transporter activity|0015572||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006324090.1;locus_tag=IY40_RS01655;product=N-acetylglucosamine-specific PTS transporter subunit IIBC;protein_id=WP_025301857.1;transl_table=11 NZ_JPQY01000002.1 RefSeq gene 293025 294689 . + . ID=gene-IY40_RS01660;Name=glnS;gbkey=Gene;gene=glnS;gene_biotype=protein_coding;locus_tag=IY40_RS01660;old_locus_tag=IY40_01690 NZ_JPQY01000002.1 Protein Homology CDS 293025 294689 . + 0 ID=cds-WP_043135776.1;Parent=gene-IY40_RS01660;Dbxref=GenBank:WP_043135776.1;Name=WP_043135776.1;Ontology_term=GO:0006425,GO:0000166,GO:0004819,GO:0005524,GO:0005737;gbkey=CDS;gene=glnS;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,glutamine-tRNA ligase activity|0004819||IEA,ATP binding|0005524||IEA;go_process=glutaminyl-tRNA aminoacylation|0006425||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015376953.1;locus_tag=IY40_RS01660;product=glutamine--tRNA ligase;protein_id=WP_043135776.1;transl_table=11 ##sequence-region NZ_JPQY01000003.1 1 316294 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=615 NZ_JPQY01000003.1 RefSeq region 1 316294 . + . ID=NZ_JPQY01000003.1:1..316294;Dbxref=taxon:615;collected-by=Mahloro H. Serepa%3B Vincent M. Gray;collection-date=2013-04-11;country=South Africa: North West Province;gbkey=Src;genome=genomic;identified-by=Mahloro H. Serepa%3B Vincent M. Gray;isolation-source=entomopathogenic nematode Oscheius sp. MCB living in soil;mol_type=genomic DNA;nat-host=Oscheius sp. MCB;strain=MCB NZ_JPQY01000003.1 RefSeq gene 23 115 . - . ID=gene-IY40_RS01665;Name=IY40_RS01665;gbkey=Gene;gene_biotype=tRNA;locus_tag=IY40_RS01665;old_locus_tag=IY40_01695 NZ_JPQY01000003.1 tRNAscan-SE tRNA 23 115 . - . ID=rna-IY40_RS01665;Parent=gene-IY40_RS01665;anticodon=(pos:complement(79..81));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=IY40_RS01665;product=tRNA-Ser NZ_JPQY01000003.1 tRNAscan-SE exon 23 115 . - . ID=exon-IY40_RS01665-1;Parent=rna-IY40_RS01665;anticodon=(pos:complement(79..81));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=IY40_RS01665;product=tRNA-Ser NZ_JPQY01000003.1 RefSeq gene 426 611 . - . ID=gene-IY40_RS01670;Name=csrA;gbkey=Gene;gene=csrA;gene_biotype=protein_coding;locus_tag=IY40_RS01670;old_locus_tag=IY40_01700 NZ_JPQY01000003.1 Protein Homology CDS 426 611 . - 0 ID=cds-WP_004091602.1;Parent=gene-IY40_RS01670;Dbxref=GenBank:WP_004091602.1;Name=WP_004091602.1;gbkey=CDS;gene=csrA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004155916.1;locus_tag=IY40_RS01670;product=carbon storage regulator CsrA;protein_id=WP_004091602.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 864 3491 . - . ID=gene-IY40_RS01675;Name=alaS;gbkey=Gene;gene=alaS;gene_biotype=protein_coding;locus_tag=IY40_RS01675;old_locus_tag=IY40_01705 NZ_JPQY01000003.1 Protein Homology CDS 864 3491 . - 0 ID=cds-WP_043135799.1;Parent=gene-IY40_RS01675;Dbxref=GenBank:WP_043135799.1;Name=WP_043135799.1;Ontology_term=GO:0006419,GO:0000166,GO:0004813,GO:0005737;gbkey=CDS;gene=alaS;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,alanine-tRNA ligase activity|0004813||IEA;go_process=alanyl-tRNA aminoacylation|0006419||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209448.1;locus_tag=IY40_RS01675;product=alanine--tRNA ligase;protein_id=WP_043135799.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 3441 3584 . + . ID=gene-IY40_RS26300;Name=IY40_RS26300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS26300 NZ_JPQY01000003.1 GeneMarkS-2+ CDS 3441 3584 . + 0 ID=cds-WP_162180460.1;Parent=gene-IY40_RS26300;Dbxref=GenBank:WP_162180460.1;Name=WP_162180460.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IY40_RS26300;product=hypothetical protein;protein_id=WP_162180460.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 3625 4137 . - . ID=gene-IY40_RS01680;Name=recX;gbkey=Gene;gene=recX;gene_biotype=protein_coding;locus_tag=IY40_RS01680;old_locus_tag=IY40_01710 NZ_JPQY01000003.1 Protein Homology CDS 3625 4137 . - 0 ID=cds-WP_043135802.1;Parent=gene-IY40_RS01680;Dbxref=GenBank:WP_043135802.1;Name=WP_043135802.1;gbkey=CDS;gene=recX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004950322.1;locus_tag=IY40_RS01680;product=recombination regulator RecX;protein_id=WP_043135802.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 4198 5262 . - . ID=gene-IY40_RS01685;Name=recA;gbkey=Gene;gene=recA;gene_biotype=protein_coding;locus_tag=IY40_RS01685;old_locus_tag=IY40_01715 NZ_JPQY01000003.1 Protein Homology CDS 4198 5262 . - 0 ID=cds-WP_004932541.1;Parent=gene-IY40_RS01685;Dbxref=GenBank:WP_004932541.1;Name=WP_004932541.1;Ontology_term=GO:0006281,GO:0003677,GO:0003697,GO:0005524,GO:0008094;gbkey=CDS;gene=recA;go_function=DNA binding|0003677||IEA,single-stranded DNA binding|0003697||IEA,ATP binding|0005524||IEA,ATP-dependent activity%2C acting on DNA|0008094||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209446.1;locus_tag=IY40_RS01685;product=recombinase RecA;protein_id=WP_004932541.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 5374 5862 . - . ID=gene-IY40_RS01690;Name=pncC;gbkey=Gene;gene=pncC;gene_biotype=protein_coding;locus_tag=IY40_RS01690;old_locus_tag=IY40_01720 NZ_JPQY01000003.1 Protein Homology CDS 5374 5862 . - 0 ID=cds-WP_025301633.1;Parent=gene-IY40_RS01690;Dbxref=GenBank:WP_025301633.1;Name=WP_025301633.1;gbkey=CDS;gene=pncC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019083876.1;locus_tag=IY40_RS01690;product=nicotinamide-nucleotide amidase;protein_id=WP_025301633.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 6106 7485 . + . ID=gene-IY40_RS01695;Name=IY40_RS01695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS01695;old_locus_tag=IY40_01725 NZ_JPQY01000003.1 Protein Homology CDS 6106 7485 . + 0 ID=cds-WP_043135805.1;Parent=gene-IY40_RS01695;Dbxref=GenBank:WP_043135805.1;Name=WP_043135805.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016929030.1;locus_tag=IY40_RS01695;product=MFS transporter;protein_id=WP_043135805.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 7495 8256 . - . ID=gene-IY40_RS01700;Name=chbG;gbkey=Gene;gene=chbG;gene_biotype=protein_coding;locus_tag=IY40_RS01700;old_locus_tag=IY40_01730 NZ_JPQY01000003.1 Protein Homology CDS 7495 8256 . - 0 ID=cds-WP_043135808.1;Parent=gene-IY40_RS01700;Dbxref=GenBank:WP_043135808.1;Name=WP_043135808.1;Ontology_term=GO:0000272,GO:0016811;gbkey=CDS;gene=chbG;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds%2C in linear amides|0016811||IEA;go_process=polysaccharide catabolic process|0000272||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004932547.1;locus_tag=IY40_RS01700;product=chitin disaccharide deacetylase;protein_id=WP_043135808.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 8405 9253 . - . ID=gene-IY40_RS01705;Name=chbR;gbkey=Gene;gene=chbR;gene_biotype=protein_coding;locus_tag=IY40_RS01705;old_locus_tag=IY40_01735 NZ_JPQY01000003.1 Protein Homology CDS 8405 9253 . - 0 ID=cds-WP_043135810.1;Parent=gene-IY40_RS01705;Dbxref=GenBank:WP_043135810.1;Name=WP_043135810.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=chbR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015376697.1;locus_tag=IY40_RS01705;product=transcriptional regulator ChbR;protein_id=WP_043135810.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 9269 10654 . - . ID=gene-IY40_RS01710;Name=IY40_RS01710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS01710;old_locus_tag=IY40_01740 NZ_JPQY01000003.1 Protein Homology CDS 9269 10654 . - 0 ID=cds-WP_043135812.1;Parent=gene-IY40_RS01710;Dbxref=GenBank:WP_043135812.1;Name=WP_043135812.1;Ontology_term=GO:0005975,GO:0016798;gbkey=CDS;go_function=hydrolase activity%2C acting on glycosyl bonds|0016798||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004950306.1;locus_tag=IY40_RS01710;product=glycoside hydrolase family 1 protein;protein_id=WP_043135812.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 10698 12059 . - . ID=gene-IY40_RS01715;Name=chbC;gbkey=Gene;gene=chbC;gene_biotype=protein_coding;locus_tag=IY40_RS01715;old_locus_tag=IY40_01745 NZ_JPQY01000003.1 Protein Homology CDS 10698 12059 . - 0 ID=cds-WP_016929034.1;Parent=gene-IY40_RS01715;Dbxref=GenBank:WP_016929034.1;Name=WP_016929034.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;gene=chbC;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310470.1;locus_tag=IY40_RS01715;product=PTS N%2CN'-diacetylchitobiose transporter subunit IIC;protein_id=WP_016929034.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 12072 12389 . - . ID=gene-IY40_RS01720;Name=IY40_RS01720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS01720;old_locus_tag=IY40_01750 NZ_JPQY01000003.1 Protein Homology CDS 12072 12389 . - 0 ID=cds-WP_004932561.1;Parent=gene-IY40_RS01720;Dbxref=GenBank:WP_004932561.1;Name=WP_004932561.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212240.1;locus_tag=IY40_RS01720;product=PTS sugar transporter subunit IIB;protein_id=WP_004932561.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 12810 13703 . - . ID=gene-IY40_RS01725;Name=IY40_RS01725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS01725;old_locus_tag=IY40_01755 NZ_JPQY01000003.1 Protein Homology CDS 12810 13703 . - 0 ID=cds-WP_043135815.1;Parent=gene-IY40_RS01725;Dbxref=GenBank:WP_043135815.1;Name=WP_043135815.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004932564.1;locus_tag=IY40_RS01725;product=LysR family transcriptional regulator;protein_id=WP_043135815.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 13810 14610 . + . ID=gene-IY40_RS01730;Name=IY40_RS01730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS01730;old_locus_tag=IY40_01760 NZ_JPQY01000003.1 Protein Homology CDS 13810 14610 . + 0 ID=cds-WP_049294839.1;Parent=gene-IY40_RS01730;Dbxref=GenBank:WP_049294839.1;Name=WP_049294839.1;Ontology_term=GO:0016491,GO:0070403;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015376694.1;locus_tag=IY40_RS01730;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_049294839.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 14623 15594 . + . ID=gene-IY40_RS01735;Name=IY40_RS01735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS01735;old_locus_tag=IY40_01765 NZ_JPQY01000003.1 Protein Homology CDS 14623 15594 . + 0 ID=cds-WP_043135818.1;Parent=gene-IY40_RS01735;Dbxref=GenBank:WP_043135818.1;Name=WP_043135818.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015376693.1;locus_tag=IY40_RS01735;product=aldo/keto reductase;protein_id=WP_043135818.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 15625 16617 . + . ID=gene-IY40_RS01740;Name=IY40_RS01740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS01740;old_locus_tag=IY40_01770 NZ_JPQY01000003.1 Protein Homology CDS 15625 16617 . + 0 ID=cds-WP_233494376.1;Parent=gene-IY40_RS01740;Dbxref=GenBank:WP_233494376.1;Name=WP_233494376.1;Ontology_term=GO:0000287,GO:0005515,GO:0016835;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,protein binding|0005515||IEA,carbon-oxygen lyase activity|0016835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004950293.1;locus_tag=IY40_RS01740;product=Vgb family protein;protein_id=WP_233494376.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 16811 17428 . + . ID=gene-IY40_RS01745;Name=IY40_RS01745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS01745;old_locus_tag=IY40_01775 NZ_JPQY01000003.1 Protein Homology CDS 16811 17428 . + 0 ID=cds-WP_025301624.1;Parent=gene-IY40_RS01745;Dbxref=GenBank:WP_025301624.1;Name=WP_025301624.1;Ontology_term=GO:0018117,GO:0005524,GO:0070733;gbkey=CDS;go_function=ATP binding|0005524||IEA,AMPylase activity|0070733||IEA;go_process=protein adenylylation|0018117||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000092746.1;locus_tag=IY40_RS01745;product=Fic/DOC family protein;protein_id=WP_025301624.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 17425 17592 . - . ID=gene-IY40_RS26340;Name=IY40_RS26340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS26340 NZ_JPQY01000003.1 Protein Homology CDS 17425 17592 . - 0 ID=cds-WP_162882342.1;Parent=gene-IY40_RS26340;Dbxref=GenBank:WP_162882342.1;Name=WP_162882342.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000069461.1;locus_tag=IY40_RS26340;product=hypothetical protein;protein_id=WP_162882342.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 17990 20545 . + . ID=gene-IY40_RS01750;Name=mutS;gbkey=Gene;gene=mutS;gene_biotype=protein_coding;locus_tag=IY40_RS01750;old_locus_tag=IY40_01780 NZ_JPQY01000003.1 Protein Homology CDS 17990 20545 . + 0 ID=cds-WP_043136296.1;Parent=gene-IY40_RS01750;Dbxref=GenBank:WP_043136296.1;Name=WP_043136296.1;Ontology_term=GO:0006298,GO:0005524,GO:0030983;gbkey=CDS;gene=mutS;go_function=ATP binding|0005524||IEA,mismatched DNA binding|0030983||IEA;go_process=mismatch repair|0006298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011815614.1;locus_tag=IY40_RS01750;product=DNA mismatch repair protein MutS;protein_id=WP_043136296.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 20625 21623 . - . ID=gene-IY40_RS01755;Name=rpoS;gbkey=Gene;gene=rpoS;gene_biotype=protein_coding;locus_tag=IY40_RS01755;old_locus_tag=IY40_01785 NZ_JPQY01000003.1 Protein Homology CDS 20625 21623 . - 0 ID=cds-WP_004932578.1;Parent=gene-IY40_RS01755;Dbxref=GenBank:WP_004932578.1;Name=WP_004932578.1;Ontology_term=GO:0006352,GO:0006355,GO:0003677,GO:0003700,GO:0016987;gbkey=CDS;gene=rpoS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000081498.1;locus_tag=IY40_RS01755;product=RNA polymerase sigma factor RpoS;protein_id=WP_004932578.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 21678 22673 . - . ID=gene-IY40_RS01760;Name=nlpD;gbkey=Gene;gene=nlpD;gene_biotype=protein_coding;locus_tag=IY40_RS01760;old_locus_tag=IY40_01790 NZ_JPQY01000003.1 Protein Homology CDS 21678 22673 . - 0 ID=cds-WP_025301622.1;Parent=gene-IY40_RS01760;Dbxref=GenBank:WP_025301622.1;Name=WP_025301622.1;gbkey=CDS;gene=nlpD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304557.1;locus_tag=IY40_RS01760;product=murein hydrolase activator NlpD;protein_id=WP_025301622.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 22999 23625 . - . ID=gene-IY40_RS01765;Name=IY40_RS01765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS01765;old_locus_tag=IY40_01795 NZ_JPQY01000003.1 Protein Homology CDS 22999 23625 . - 0 ID=cds-WP_004932585.1;Parent=gene-IY40_RS01765;Dbxref=GenBank:WP_004932585.1;Name=WP_004932585.1;Ontology_term=GO:0036211,GO:0004719;gbkey=CDS;go_function=protein-L-isoaspartate (D-aspartate) O-methyltransferase activity|0004719||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130872.1;locus_tag=IY40_RS01765;product=protein-L-isoaspartate(D-aspartate) O-methyltransferase;protein_id=WP_004932585.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 23619 24380 . - . ID=gene-IY40_RS01770;Name=surE;gbkey=Gene;gene=surE;gene_biotype=protein_coding;locus_tag=IY40_RS01770;old_locus_tag=IY40_01800 NZ_JPQY01000003.1 Protein Homology CDS 23619 24380 . - 0 ID=cds-WP_043135825.1;Parent=gene-IY40_RS01770;Dbxref=GenBank:WP_043135825.1;Name=WP_043135825.1;Ontology_term=GO:0008252;gbkey=CDS;gene=surE;go_function=nucleotidase activity|0008252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012005277.1;locus_tag=IY40_RS01770;product=5'/3'-nucleotidase SurE;protein_id=WP_043135825.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 24361 25407 . - . ID=gene-IY40_RS01775;Name=truD;gbkey=Gene;gene=truD;gene_biotype=protein_coding;locus_tag=IY40_RS01775;old_locus_tag=IY40_01805 NZ_JPQY01000003.1 Protein Homology CDS 24361 25407 . - 0 ID=cds-WP_043135828.1;Parent=gene-IY40_RS01775;Dbxref=GenBank:WP_043135828.1;Name=WP_043135828.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;gene=truD;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011815611.1;locus_tag=IY40_RS01775;product=tRNA pseudouridine(13) synthase TruD;protein_id=WP_043135828.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 25412 25885 . - . ID=gene-IY40_RS01780;Name=ispF;gbkey=Gene;gene=ispF;gene_biotype=protein_coding;locus_tag=IY40_RS01780;old_locus_tag=IY40_01810 NZ_JPQY01000003.1 Protein Homology CDS 25412 25885 . - 0 ID=cds-WP_004932594.1;Parent=gene-IY40_RS01780;Dbxref=GenBank:WP_004932594.1;Name=WP_004932594.1;Ontology_term=GO:0019288,GO:0008685;gbkey=CDS;gene=ispF;go_function=2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase activity|0008685||IEA;go_process=isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008815142.1;locus_tag=IY40_RS01780;product=2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase;protein_id=WP_004932594.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 25896 26603 . - . ID=gene-IY40_RS01785;Name=ispD;gbkey=Gene;gene=ispD;gene_biotype=protein_coding;locus_tag=IY40_RS01785;old_locus_tag=IY40_01815 NZ_JPQY01000003.1 Protein Homology CDS 25896 26603 . - 0 ID=cds-WP_043135831.1;Parent=gene-IY40_RS01785;Dbxref=GenBank:WP_043135831.1;Name=WP_043135831.1;Ontology_term=GO:0008299,GO:0019288,GO:0050518;gbkey=CDS;gene=ispD;go_function=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity|0050518||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA,isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012005274.1;locus_tag=IY40_RS01785;product=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase;protein_id=WP_043135831.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 26607 26927 . - . ID=gene-IY40_RS01790;Name=ftsB;gbkey=Gene;gene=ftsB;gene_biotype=protein_coding;locus_tag=IY40_RS01790;old_locus_tag=IY40_01820 NZ_JPQY01000003.1 Protein Homology CDS 26607 26927 . - 0 ID=cds-WP_021505314.1;Parent=gene-IY40_RS01790;Dbxref=GenBank:WP_021505314.1;Name=WP_021505314.1;gbkey=CDS;gene=ftsB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012005273.1;locus_tag=IY40_RS01790;product=cell division protein FtsB;protein_id=WP_021505314.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 27331 28101 . + . ID=gene-IY40_RS01795;Name=IY40_RS01795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS01795;old_locus_tag=IY40_01825 NZ_JPQY01000003.1 Protein Homology CDS 27331 28101 . + 0 ID=cds-WP_025301618.1;Parent=gene-IY40_RS01795;Dbxref=GenBank:WP_025301618.1;Name=WP_025301618.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004932602.1;locus_tag=IY40_RS01795;product=basic amino acid ABC transporter substrate-binding protein;protein_id=WP_025301618.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 28123 28935 . + . ID=gene-IY40_RS01800;Name=IY40_RS01800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS01800;old_locus_tag=IY40_01830 NZ_JPQY01000003.1 Protein Homology CDS 28123 28935 . + 0 ID=cds-WP_049204754.1;Parent=gene-IY40_RS01800;Dbxref=GenBank:WP_049204754.1;Name=WP_049204754.1;Ontology_term=GO:0006865,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012005271.1;locus_tag=IY40_RS01800;product=amino acid ABC transporter permease;protein_id=WP_049204754.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 28919 29641 . + . ID=gene-IY40_RS01805;Name=IY40_RS01805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS01805;old_locus_tag=IY40_01835 NZ_JPQY01000003.1 Protein Homology CDS 28919 29641 . + 0 ID=cds-WP_043135839.1;Parent=gene-IY40_RS01805;Dbxref=GenBank:WP_043135839.1;Name=WP_043135839.1;Ontology_term=GO:0005524,GO:0015424,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ABC-type amino acid transporter activity|0015424||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015670978.1;locus_tag=IY40_RS01805;product=amino acid ABC transporter ATP-binding protein;protein_id=WP_043135839.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 29694 30020 . - . ID=gene-IY40_RS01810;Name=IY40_RS01810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS01810;old_locus_tag=IY40_01840 NZ_JPQY01000003.1 Protein Homology CDS 29694 30020 . - 0 ID=cds-WP_025301616.1;Parent=gene-IY40_RS01810;Dbxref=GenBank:WP_025301616.1;Name=WP_025301616.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015683729.1;locus_tag=IY40_RS01810;product=DUF3561 family protein;protein_id=WP_025301616.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 30105 30794 . - . ID=gene-IY40_RS01815;Name=cysC;gbkey=Gene;gene=cysC;gene_biotype=protein_coding;locus_tag=IY40_RS01815;old_locus_tag=IY40_01845 NZ_JPQY01000003.1 Protein Homology CDS 30105 30794 . - 0 ID=cds-WP_080287102.1;Parent=gene-IY40_RS01815;Dbxref=GenBank:WP_080287102.1;Name=WP_080287102.1;Ontology_term=GO:0000103,GO:0004020,GO:0005524;gbkey=CDS;gene=cysC;go_function=adenylylsulfate kinase activity|0004020||IEA,ATP binding|0005524||IEA;go_process=sulfate assimilation|0000103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014539367.1;locus_tag=IY40_RS01815;product=adenylyl-sulfate kinase;protein_id=WP_080287102.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 30733 32160 . - . ID=gene-IY40_RS01820;Name=cysN;gbkey=Gene;gene=cysN;gene_biotype=protein_coding;locus_tag=IY40_RS01820;old_locus_tag=IY40_01850 NZ_JPQY01000003.1 Protein Homology CDS 30733 32160 . - 0 ID=cds-WP_043135846.1;Parent=gene-IY40_RS01820;Dbxref=GenBank:WP_043135846.1;Name=WP_043135846.1;Ontology_term=GO:0006790,GO:0003924,GO:0005525;gbkey=CDS;gene=cysN;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=sulfur compound metabolic process|0006790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016929049.1;locus_tag=IY40_RS01820;product=sulfate adenylyltransferase subunit CysN;protein_id=WP_043135846.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 32172 33080 . - . ID=gene-IY40_RS01825;Name=cysD;gbkey=Gene;gene=cysD;gene_biotype=protein_coding;locus_tag=IY40_RS01825;old_locus_tag=IY40_01855 NZ_JPQY01000003.1 Protein Homology CDS 32172 33080 . - 0 ID=cds-WP_004932620.1;Parent=gene-IY40_RS01825;Dbxref=GenBank:WP_004932620.1;Name=WP_004932620.1;Ontology_term=GO:0000103,GO:0004781;gbkey=CDS;gene=cysD;go_function=sulfate adenylyltransferase (ATP) activity|0004781||IEA;go_process=sulfate assimilation|0000103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130891.1;locus_tag=IY40_RS01825;product=sulfate adenylyltransferase subunit CysD;protein_id=WP_004932620.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 33103 34533 . - . ID=gene-IY40_RS01830;Name=cysG;gbkey=Gene;gene=cysG;gene_biotype=protein_coding;locus_tag=IY40_RS01830;old_locus_tag=IY40_01860 NZ_JPQY01000003.1 Protein Homology CDS 33103 34533 . - 0 ID=cds-WP_043135853.1;Parent=gene-IY40_RS01830;Dbxref=GenBank:WP_043135853.1;Name=WP_043135853.1;Ontology_term=GO:0019354,GO:0004851,GO:0043115,GO:0051266,GO:0051287;gbkey=CDS;gene=cysG;go_function=uroporphyrin-III C-methyltransferase activity|0004851||IEA,precorrin-2 dehydrogenase activity|0043115||IEA,sirohydrochlorin ferrochelatase activity|0051266||IEA,NAD binding|0051287||IEA;go_process=siroheme biosynthetic process|0019354||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209385.1;locus_tag=IY40_RS01830;product=siroheme synthase CysG;protein_id=WP_043135853.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 34795 35865 . + . ID=gene-IY40_RS01835;Name=IY40_RS01835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS01835;old_locus_tag=IY40_01865 NZ_JPQY01000003.1 Protein Homology CDS 34795 35865 . + 0 ID=cds-WP_025301612.1;Parent=gene-IY40_RS01835;Dbxref=GenBank:WP_025301612.1;Name=WP_025301612.1;Ontology_term=GO:0008235;gbkey=CDS;go_function=metalloexopeptidase activity|0008235||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015376682.1;locus_tag=IY40_RS01835;product=aminopeptidase;protein_id=WP_025301612.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 35921 36655 . - . ID=gene-IY40_RS01840;Name=IY40_RS01840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS01840;old_locus_tag=IY40_01870 NZ_JPQY01000003.1 Protein Homology CDS 35921 36655 . - 0 ID=cds-WP_016929052.1;Parent=gene-IY40_RS01840;Dbxref=GenBank:WP_016929052.1;Name=WP_016929052.1;Ontology_term=GO:0019379,GO:0003824,GO:0004604;gbkey=CDS;go_function=catalytic activity|0003824||IEA,phosphoadenylyl-sulfate reductase (thioredoxin) activity|0004604||IEA;go_process=sulfate assimilation%2C phosphoadenylyl sulfate reduction by phosphoadenylyl-sulfate reductase (thioredoxin)|0019379||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006317694.1;locus_tag=IY40_RS01840;product=phosphoadenylyl-sulfate reductase;protein_id=WP_016929052.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 36717 38432 . - . ID=gene-IY40_RS01845;Name=cysI;gbkey=Gene;gene=cysI;gene_biotype=protein_coding;locus_tag=IY40_RS01845;old_locus_tag=IY40_01875 NZ_JPQY01000003.1 Protein Homology CDS 36717 38432 . - 0 ID=cds-WP_043135856.1;Parent=gene-IY40_RS01845;Dbxref=GenBank:WP_043135856.1;Name=WP_043135856.1;Ontology_term=GO:0000103,GO:0008652,GO:0004783,GO:0050661,GO:0051539,GO:0009337;gbkey=CDS;gene=cysI;go_component=sulfite reductase complex (NADPH)|0009337||IEA;go_function=sulfite reductase (NADPH) activity|0004783||IEA,NADP binding|0050661||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=sulfate assimilation|0000103||IEA,amino acid biosynthetic process|0008652||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015670969.1;locus_tag=IY40_RS01845;product=assimilatory sulfite reductase (NADPH) hemoprotein subunit;protein_id=WP_043135856.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 38432 40234 . - . ID=gene-IY40_RS01850;Name=cysJ;gbkey=Gene;gene=cysJ;gene_biotype=protein_coding;locus_tag=IY40_RS01850;old_locus_tag=IY40_01880 NZ_JPQY01000003.1 Protein Homology CDS 38432 40234 . - 0 ID=cds-WP_043135857.1;Parent=gene-IY40_RS01850;Dbxref=GenBank:WP_043135857.1;Name=WP_043135857.1;Ontology_term=GO:0000103,GO:0019344,GO:0004783,GO:0010181,GO:0050660;gbkey=CDS;gene=cysJ;go_function=sulfite reductase (NADPH) activity|0004783||IEA,FMN binding|0010181||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=sulfate assimilation|0000103||IEA,cysteine biosynthetic process|0019344||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209381.1;locus_tag=IY40_RS01850;product=NADPH-dependent assimilatory sulfite reductase flavoprotein subunit;protein_id=WP_043135857.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 40671 41030 . + . ID=gene-IY40_RS01855;Name=queD;gbkey=Gene;gene=queD;gene_biotype=protein_coding;locus_tag=IY40_RS01855;old_locus_tag=IY40_01885 NZ_JPQY01000003.1 Protein Homology CDS 40671 41030 . + 0 ID=cds-WP_025301608.1;Parent=gene-IY40_RS01855;Dbxref=GenBank:WP_025301608.1;Name=WP_025301608.1;Ontology_term=GO:0008616,GO:0003824;gbkey=CDS;gene=queD;go_function=catalytic activity|0003824||IEA;go_process=tRNA queuosine(34) biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304561.1;locus_tag=IY40_RS01855;product=6-carboxytetrahydropterin synthase QueD;protein_id=WP_025301608.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 41057 41566 . - . ID=gene-IY40_RS01860;Name=IY40_RS01860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS01860;old_locus_tag=IY40_01890 NZ_JPQY01000003.1 Protein Homology CDS 41057 41566 . - 0 ID=cds-WP_050505121.1;Parent=gene-IY40_RS01860;Dbxref=GenBank:WP_050505121.1;Name=WP_050505121.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024917.6;locus_tag=IY40_RS01860;product=GNAT family N-acetyltransferase;protein_id=WP_050505121.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 41610 42281 . - . ID=gene-IY40_RS01865;Name=queE;gbkey=Gene;gene=queE;gene_biotype=protein_coding;locus_tag=IY40_RS01865;old_locus_tag=IY40_01895 NZ_JPQY01000003.1 Protein Homology CDS 41610 42281 . - 0 ID=cds-WP_004932641.1;Parent=gene-IY40_RS01865;Dbxref=GenBank:WP_004932641.1;Name=WP_004932641.1;Ontology_term=GO:0006400,GO:0051539,GO:1904047;gbkey=CDS;gene=queE;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209379.1;locus_tag=IY40_RS01865;product=7-carboxy-7-deazaguanine synthase QueE;protein_id=WP_004932641.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 42605 43945 . + . ID=gene-IY40_RS01870;Name=IY40_RS01870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS01870;old_locus_tag=IY40_01900 NZ_JPQY01000003.1 Protein Homology CDS 42605 43945 . + 0 ID=cds-WP_025301605.1;Parent=gene-IY40_RS01870;Dbxref=GenBank:WP_025301605.1;Name=WP_025301605.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019455103.1;locus_tag=IY40_RS01870;product=MFS transporter;protein_id=WP_025301605.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 44321 46012 . + . ID=gene-IY40_RS01875;Name=hutU;gbkey=Gene;gene=hutU;gene_biotype=protein_coding;locus_tag=IY40_RS01875;old_locus_tag=IY40_01905 NZ_JPQY01000003.1 Protein Homology CDS 44321 46012 . + 0 ID=cds-WP_025159649.1;Parent=gene-IY40_RS01875;Dbxref=GenBank:WP_025159649.1;Name=WP_025159649.1;Ontology_term=GO:0006548,GO:0016153;gbkey=CDS;gene=hutU;go_function=urocanate hydratase activity|0016153||IEA;go_process=L-histidine catabolic process|0006548||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017891637.1;locus_tag=IY40_RS01875;product=urocanate hydratase;protein_id=WP_025159649.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 46009 47544 . + . ID=gene-IY40_RS01880;Name=hutH;gbkey=Gene;gene=hutH;gene_biotype=protein_coding;locus_tag=IY40_RS01880;old_locus_tag=IY40_01910 NZ_JPQY01000003.1 Protein Homology CDS 46009 47544 . + 0 ID=cds-WP_043135860.1;Parent=gene-IY40_RS01880;Dbxref=GenBank:WP_043135860.1;Name=WP_043135860.1;Ontology_term=GO:0006548,GO:0004397,GO:0005737;gbkey=CDS;gene=hutH;go_component=cytoplasm|0005737||IEA;go_function=histidine ammonia-lyase activity|0004397||IEA;go_process=L-histidine catabolic process|0006548||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012005252.1;locus_tag=IY40_RS01880;product=histidine ammonia-lyase;protein_id=WP_043135860.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 47647 49017 . + . ID=gene-IY40_RS01885;Name=IY40_RS01885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS01885;old_locus_tag=IY40_01915 NZ_JPQY01000003.1 Protein Homology CDS 47647 49017 . + 0 ID=cds-WP_043135863.1;Parent=gene-IY40_RS01885;Dbxref=GenBank:WP_043135863.1;Name=WP_043135863.1;Ontology_term=GO:0006865,GO:0055085,GO:0015171,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015670962.1;locus_tag=IY40_RS01885;product=amino acid permease;protein_id=WP_043135863.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 49078 50274 . - . ID=gene-IY40_RS01890;Name=IY40_RS01890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS01890;old_locus_tag=IY40_01920 NZ_JPQY01000003.1 Protein Homology CDS 49078 50274 . - 0 ID=cds-WP_043135867.1;Parent=gene-IY40_RS01890;Dbxref=GenBank:WP_043135867.1;Name=WP_043135867.1;Ontology_term=GO:0019346,GO:0018826,GO:0030170;gbkey=CDS;go_function=methionine gamma-lyase activity|0018826||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=transsulfuration|0019346||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015376674.1;locus_tag=IY40_RS01890;product=methionine gamma-lyase;protein_id=WP_043135867.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 50305 50709 . - . ID=gene-IY40_RS01895;Name=IY40_RS01895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS01895;old_locus_tag=IY40_01925 NZ_JPQY01000003.1 Protein Homology CDS 50305 50709 . - 0 ID=cds-WP_080271238.1;Parent=gene-IY40_RS01895;Dbxref=GenBank:WP_080271238.1;Name=WP_080271238.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015376673.1;locus_tag=IY40_RS01895;product=hypothetical protein;protein_id=WP_080271238.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 50706 51896 . - . ID=gene-IY40_RS01900;Name=IY40_RS01900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS01900;old_locus_tag=IY40_01930 NZ_JPQY01000003.1 Protein Homology CDS 50706 51896 . - 0 ID=cds-WP_025301600.1;Parent=gene-IY40_RS01900;Dbxref=GenBank:WP_025301600.1;Name=WP_025301600.1;Ontology_term=GO:0000166,GO:0016491;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013811523.1;locus_tag=IY40_RS01900;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_025301600.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 52183 53478 . - . ID=gene-IY40_RS01905;Name=eno;gbkey=Gene;gene=eno;gene_biotype=protein_coding;locus_tag=IY40_RS01905;old_locus_tag=IY40_01935 NZ_JPQY01000003.1 Protein Homology CDS 52183 53478 . - 0 ID=cds-WP_025301599.1;Parent=gene-IY40_RS01905;Dbxref=GenBank:WP_025301599.1;Name=WP_025301599.1;Ontology_term=GO:0006096,GO:0000287,GO:0004634,GO:0000015;gbkey=CDS;gene=eno;go_component=phosphopyruvate hydratase complex|0000015||IEA;go_function=magnesium ion binding|0000287||IEA,phosphopyruvate hydratase activity|0004634||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012005243.1;locus_tag=IY40_RS01905;product=phosphopyruvate hydratase;protein_id=WP_025301599.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 53560 55197 . - . ID=gene-IY40_RS01910;Name=pyrG;gbkey=Gene;gene=pyrG;gene_biotype=protein_coding;locus_tag=IY40_RS01910;old_locus_tag=IY40_01940 NZ_JPQY01000003.1 Protein Homology CDS 53560 55197 . - 0 ID=cds-WP_004932674.1;Parent=gene-IY40_RS01910;Dbxref=GenBank:WP_004932674.1;Name=WP_004932674.1;Ontology_term=GO:0006221,GO:0003883;gbkey=CDS;gene=pyrG;go_function=CTP synthase activity|0003883||IEA;go_process=pyrimidine nucleotide biosynthetic process|0006221||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130912.1;locus_tag=IY40_RS01910;product=glutamine hydrolyzing CTP synthase;protein_id=WP_004932674.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 55549 56343 . - . ID=gene-IY40_RS01915;Name=mazG;gbkey=Gene;gene=mazG;gene_biotype=protein_coding;locus_tag=IY40_RS01915;old_locus_tag=IY40_01945 NZ_JPQY01000003.1 Protein Homology CDS 55549 56343 . - 0 ID=cds-WP_025301598.1;Parent=gene-IY40_RS01915;Dbxref=GenBank:WP_025301598.1;Name=WP_025301598.1;gbkey=CDS;gene=mazG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013811520.1;locus_tag=IY40_RS01915;product=nucleoside triphosphate pyrophosphohydrolase;protein_id=WP_025301598.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 56446 58677 . - . ID=gene-IY40_RS01920;Name=relA;gbkey=Gene;gene=relA;gene_biotype=protein_coding;locus_tag=IY40_RS01920;old_locus_tag=IY40_01950 NZ_JPQY01000003.1 Protein Homology CDS 56446 58677 . - 0 ID=cds-WP_025301597.1;Parent=gene-IY40_RS01920;Dbxref=GenBank:WP_025301597.1;Name=WP_025301597.1;Ontology_term=GO:0015969;gbkey=CDS;gene=relA;go_process=guanosine tetraphosphate metabolic process|0015969||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209373.1;locus_tag=IY40_RS01920;product=GTP diphosphokinase;protein_id=WP_025301597.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 58687 60036 . - . ID=gene-IY40_RS01925;Name=rlmD;gbkey=Gene;gene=rlmD;gene_biotype=protein_coding;locus_tag=IY40_RS01925;old_locus_tag=IY40_01955 NZ_JPQY01000003.1 Protein Homology CDS 58687 60036 . - 0 ID=cds-WP_043135872.1;Parent=gene-IY40_RS01925;Dbxref=GenBank:WP_043135872.1;Name=WP_043135872.1;Ontology_term=GO:0006396,GO:0008173;gbkey=CDS;gene=rlmD;go_function=RNA methyltransferase activity|0008173||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015376669.1;locus_tag=IY40_RS01925;product=23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD;protein_id=WP_043135872.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 60103 62829 . + . ID=gene-IY40_RS01930;Name=barA;gbkey=Gene;gene=barA;gene_biotype=protein_coding;locus_tag=IY40_RS01930;old_locus_tag=IY40_01960 NZ_JPQY01000003.1 Protein Homology CDS 60103 62829 . + 0 ID=cds-WP_025301595.1;Parent=gene-IY40_RS01930;Dbxref=GenBank:WP_025301595.1;Name=WP_025301595.1;Ontology_term=GO:0000160,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=barA;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015376668.1;locus_tag=IY40_RS01930;product=two-component sensor histidine kinase BarA;protein_id=WP_025301595.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 62898 64337 . - . ID=gene-IY40_RS01935;Name=degP;gbkey=Gene;gene=degP;gene_biotype=protein_coding;locus_tag=IY40_RS01935;old_locus_tag=IY40_01965 NZ_JPQY01000003.1 Protein Homology CDS 62898 64337 . - 0 ID=cds-WP_043135875.1;Parent=gene-IY40_RS01935;Dbxref=GenBank:WP_043135875.1;Name=WP_043135875.1;gbkey=CDS;gene=degP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013649325.1;locus_tag=IY40_RS01935;product=serine endoprotease DegP;protein_id=WP_043135875.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 64518 66035 . - . ID=gene-IY40_RS01940;Name=dgt;gbkey=Gene;gene=dgt;gene_biotype=protein_coding;locus_tag=IY40_RS01940;old_locus_tag=IY40_01970 NZ_JPQY01000003.1 Protein Homology CDS 64518 66035 . - 0 ID=cds-WP_043135878.1;Parent=gene-IY40_RS01940;Dbxref=GenBank:WP_043135878.1;Name=WP_043135878.1;Ontology_term=GO:0006203,GO:0000287,GO:0008832;gbkey=CDS;gene=dgt;go_function=magnesium ion binding|0000287||IEA,dGTPase activity|0008832||IEA;go_process=dGTP catabolic process|0006203||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304564.1;locus_tag=IY40_RS01940;product=dGTPase;protein_id=WP_043135878.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 66165 66866 . + . ID=gene-IY40_RS01945;Name=mtnN;gbkey=Gene;gene=mtnN;gene_biotype=protein_coding;locus_tag=IY40_RS01945;old_locus_tag=IY40_01975 NZ_JPQY01000003.1 Protein Homology CDS 66165 66866 . + 0 ID=cds-WP_043135881.1;Parent=gene-IY40_RS01945;Dbxref=GenBank:WP_043135881.1;Name=WP_043135881.1;Ontology_term=GO:0009164,GO:0019509,GO:0008782,GO:0008930;gbkey=CDS;gene=mtnN;go_function=adenosylhomocysteine nucleosidase activity|0008782||IEA,methylthioadenosine nucleosidase activity|0008930||IEA;go_process=nucleoside catabolic process|0009164||IEA,L-methionine salvage from methylthioadenosine|0019509||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004932702.1;locus_tag=IY40_RS01945;product=5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase;protein_id=WP_043135881.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 66889 67674 . + . ID=gene-IY40_RS01950;Name=btuF;gbkey=Gene;gene=btuF;gene_biotype=protein_coding;locus_tag=IY40_RS01950;old_locus_tag=IY40_01980 NZ_JPQY01000003.1 Protein Homology CDS 66889 67674 . + 0 ID=cds-WP_043136301.1;Parent=gene-IY40_RS01950;Dbxref=GenBank:WP_043136301.1;Name=WP_043136301.1;Ontology_term=GO:0005524,GO:0031419;gbkey=CDS;gene=btuF;go_function=ATP binding|0005524||IEA,cobalamin binding|0031419||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019455093.1;locus_tag=IY40_RS01950;product=vitamin B12 ABC transporter substrate-binding protein BtuF;protein_id=WP_043136301.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 67674 68288 . + . ID=gene-IY40_RS01955;Name=IY40_RS01955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS01955;old_locus_tag=IY40_01985 NZ_JPQY01000003.1 Protein Homology CDS 67674 68288 . + 0 ID=cds-WP_038873529.1;Parent=gene-IY40_RS01955;Dbxref=GenBank:WP_038873529.1;Name=WP_038873529.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015376663.1;locus_tag=IY40_RS01955;product=TRIC cation channel family protein;protein_id=WP_038873529.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 68489 68737 . + . ID=gene-IY40_RS01960;Name=IY40_RS01960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS01960;old_locus_tag=IY40_01990 NZ_JPQY01000003.1 GeneMarkS-2+ CDS 68489 68737 . + 0 ID=cds-WP_025301589.1;Parent=gene-IY40_RS01960;Dbxref=GenBank:WP_025301589.1;Name=WP_025301589.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IY40_RS01960;product=hypothetical protein;protein_id=WP_025301589.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 68794 69138 . - . ID=gene-IY40_RS01965;Name=erpA;gbkey=Gene;gene=erpA;gene_biotype=protein_coding;locus_tag=IY40_RS01965;old_locus_tag=IY40_01995 NZ_JPQY01000003.1 Protein Homology CDS 68794 69138 . - 0 ID=cds-WP_004932708.1;Parent=gene-IY40_RS01965;Dbxref=GenBank:WP_004932708.1;Name=WP_004932708.1;Ontology_term=GO:0016226,GO:0051536;gbkey=CDS;gene=erpA;go_function=iron-sulfur cluster binding|0051536||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001295564.1;locus_tag=IY40_RS01965;product=iron-sulfur cluster insertion protein ErpA;protein_id=WP_004932708.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 69228 70667 . - . ID=gene-IY40_RS01970;Name=clcA;gbkey=Gene;gene=clcA;gene_biotype=protein_coding;locus_tag=IY40_RS01970;old_locus_tag=IY40_02000 NZ_JPQY01000003.1 Protein Homology CDS 69228 70667 . - 0 ID=cds-WP_025301588.1;Parent=gene-IY40_RS01970;Dbxref=GenBank:WP_025301588.1;Name=WP_025301588.1;Ontology_term=GO:0006821,GO:0055085,GO:0005247,GO:0005886;gbkey=CDS;gene=clcA;go_component=plasma membrane|0005886||IEA;go_function=voltage-gated chloride channel activity|0005247||IEA;go_process=chloride transport|0006821||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015670938.1;locus_tag=IY40_RS01970;product=H(+)/Cl(-) exchange transporter ClcA;protein_id=WP_025301588.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 70842 72131 . + . ID=gene-IY40_RS01975;Name=hemL;gbkey=Gene;gene=hemL;gene_biotype=protein_coding;locus_tag=IY40_RS01975;old_locus_tag=IY40_02005 NZ_JPQY01000003.1 Protein Homology CDS 70842 72131 . + 0 ID=cds-WP_043135898.1;Parent=gene-IY40_RS01975;Dbxref=GenBank:WP_043135898.1;Name=WP_043135898.1;Ontology_term=GO:0033014,GO:0042286;gbkey=CDS;gene=hemL;go_function=glutamate-1-semialdehyde 2%2C1-aminomutase activity|0042286||IEA;go_process=tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012005229.1;locus_tag=IY40_RS01975;product=glutamate-1-semialdehyde 2%2C1-aminomutase;protein_id=WP_043135898.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 72192 73046 . - . ID=gene-IY40_RS01980;Name=ampE;gbkey=Gene;gene=ampE;gene_biotype=protein_coding;locus_tag=IY40_RS01980;old_locus_tag=IY40_02010 NZ_JPQY01000003.1 Protein Homology CDS 72192 73046 . - 0 ID=cds-WP_043135900.1;Parent=gene-IY40_RS01980;Dbxref=GenBank:WP_043135900.1;Name=WP_043135900.1;gbkey=CDS;gene=ampE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209326.1;locus_tag=IY40_RS01980;product=beta-lactamase regulator AmpE;protein_id=WP_043135900.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 73046 73642 . - . ID=gene-IY40_RS01985;Name=ampD;gbkey=Gene;gene=ampD;gene_biotype=protein_coding;locus_tag=IY40_RS01985;old_locus_tag=IY40_02015 NZ_JPQY01000003.1 Protein Homology CDS 73046 73642 . - 0 ID=cds-WP_025301585.1;Parent=gene-IY40_RS01985;Dbxref=GenBank:WP_025301585.1;Name=WP_025301585.1;Ontology_term=GO:0009253,GO:0008745;gbkey=CDS;gene=ampD;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004932715.1;locus_tag=IY40_RS01985;product=1%2C6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD;protein_id=WP_025301585.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 73727 74617 . + . ID=gene-IY40_RS01990;Name=nadC;gbkey=Gene;gene=nadC;gene_biotype=protein_coding;locus_tag=IY40_RS01990;old_locus_tag=IY40_02020 NZ_JPQY01000003.1 Protein Homology CDS 73727 74617 . + 0 ID=cds-WP_025301584.1;Parent=gene-IY40_RS01990;Dbxref=GenBank:WP_025301584.1;Name=WP_025301584.1;Ontology_term=GO:0009435,GO:0004514;gbkey=CDS;gene=nadC;go_function=nicotinate-nucleotide diphosphorylase (carboxylating) activity|0004514||IEA;go_process=NAD+ biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209324.1;locus_tag=IY40_RS01990;product=carboxylating nicotinate-nucleotide diphosphorylase;protein_id=WP_025301584.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 74807 75244 . + . ID=gene-IY40_RS01995;Name=ppdD;gbkey=Gene;gene=ppdD;gene_biotype=protein_coding;locus_tag=IY40_RS01995;old_locus_tag=IY40_02025 NZ_JPQY01000003.1 Protein Homology CDS 74807 75244 . + 0 ID=cds-WP_043135904.1;Parent=gene-IY40_RS01995;Dbxref=GenBank:WP_043135904.1;Name=WP_043135904.1;gbkey=CDS;gene=ppdD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004932719.1;locus_tag=IY40_RS01995;product=prepilin peptidase-dependent pilin;protein_id=WP_043135904.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 75250 76692 . + . ID=gene-IY40_RS02000;Name=gspE;gbkey=Gene;gene=gspE;gene_biotype=protein_coding;locus_tag=IY40_RS02000;old_locus_tag=IY40_02030 NZ_JPQY01000003.1 Protein Homology CDS 75250 76692 . + 0 ID=cds-WP_025301582.1;Parent=gene-IY40_RS02000;Dbxref=GenBank:WP_025301582.1;Name=WP_025301582.1;gbkey=CDS;gene=gspE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015376658.1;locus_tag=IY40_RS02000;product=type II secretion system protein GspE;protein_id=WP_025301582.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 76689 77888 . + . ID=gene-IY40_RS02005;Name=hofC;gbkey=Gene;gene=hofC;gene_biotype=protein_coding;locus_tag=IY40_RS02005;old_locus_tag=IY40_02035 NZ_JPQY01000003.1 Protein Homology CDS 76689 77888 . + 0 ID=cds-WP_043135909.1;Parent=gene-IY40_RS02005;Dbxref=GenBank:WP_043135909.1;Name=WP_043135909.1;Ontology_term=GO:0004827;gbkey=CDS;gene=hofC;go_function=proline-tRNA ligase activity|0004827||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006323600.1;locus_tag=IY40_RS02005;product=protein transport protein HofC;protein_id=WP_043135909.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 77943 78986 . - . ID=gene-IY40_RS02010;Name=IY40_RS02010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS02010;old_locus_tag=IY40_02040 NZ_JPQY01000003.1 Protein Homology CDS 77943 78986 . - 0 ID=cds-WP_043135912.1;Parent=gene-IY40_RS02010;Dbxref=GenBank:WP_043135912.1;Name=WP_043135912.1;Ontology_term=GO:0009117,GO:0003920;gbkey=CDS;go_function=GMP reductase activity|0003920||IEA;go_process=nucleotide metabolic process|0009117||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004932727.1;locus_tag=IY40_RS02010;product=GMP reductase;protein_id=WP_043135912.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 79349 79963 . + . ID=gene-IY40_RS02015;Name=coaE;gbkey=Gene;gene=coaE;gene_biotype=protein_coding;locus_tag=IY40_RS02015;old_locus_tag=IY40_02045 NZ_JPQY01000003.1 Protein Homology CDS 79349 79963 . + 0 ID=cds-WP_043135914.1;Parent=gene-IY40_RS02015;Dbxref=GenBank:WP_043135914.1;Name=WP_043135914.1;Note=Dephospho-CoA kinase (CoaE) performs the final step in coenzyme A biosynthesis.;Ontology_term=GO:0015937,GO:0004140,GO:0005524,GO:0005737;gbkey=CDS;gene=coaE;go_component=cytoplasm|0005737||IEA;go_function=dephospho-CoA kinase activity|0004140||IEA,ATP binding|0005524||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017891611.1;locus_tag=IY40_RS02015;product=dephospho-CoA kinase;protein_id=WP_043135914.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 79969 80721 . + . ID=gene-IY40_RS02020;Name=zapD;gbkey=Gene;gene=zapD;gene_biotype=protein_coding;locus_tag=IY40_RS02020;old_locus_tag=IY40_02050 NZ_JPQY01000003.1 Protein Homology CDS 79969 80721 . + 0 ID=cds-WP_025301579.1;Parent=gene-IY40_RS02020;Dbxref=GenBank:WP_025301579.1;Name=WP_025301579.1;gbkey=CDS;gene=zapD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019080502.1;locus_tag=IY40_RS02020;product=cell division protein ZapD;protein_id=WP_025301579.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 80773 80964 . + . ID=gene-IY40_RS02025;Name=yacG;gbkey=Gene;gene=yacG;gene_biotype=protein_coding;locus_tag=IY40_RS02025;old_locus_tag=IY40_02055 NZ_JPQY01000003.1 Protein Homology CDS 80773 80964 . + 0 ID=cds-WP_025301578.1;Parent=gene-IY40_RS02025;Dbxref=GenBank:WP_025301578.1;Name=WP_025301578.1;Ontology_term=GO:0006355,GO:0008270;gbkey=CDS;gene=yacG;go_function=zinc ion binding|0008270||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013811502.1;locus_tag=IY40_RS02025;product=DNA gyrase inhibitor YacG;protein_id=WP_025301578.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 81004 81408 . - . ID=gene-IY40_RS02030;Name=mutT;gbkey=Gene;gene=mutT;gene_biotype=protein_coding;locus_tag=IY40_RS02030;old_locus_tag=IY40_02060 NZ_JPQY01000003.1 Protein Homology CDS 81004 81408 . - 0 ID=cds-WP_025301577.1;Parent=gene-IY40_RS02030;Dbxref=GenBank:WP_025301577.1;Name=WP_025301577.1;Ontology_term=GO:0006281,GO:0008413;gbkey=CDS;gene=mutT;go_function=8-oxo-7%2C8-dihydroguanosine triphosphate pyrophosphatase activity|0008413||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006323599.1;locus_tag=IY40_RS02030;product=8-oxo-dGTP diphosphatase MutT;protein_id=WP_025301577.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 81489 84197 . - . ID=gene-IY40_RS02035;Name=secA;gbkey=Gene;gene=secA;gene_biotype=protein_coding;locus_tag=IY40_RS02035;old_locus_tag=IY40_02065 NZ_JPQY01000003.1 Protein Homology CDS 81489 84197 . - 0 ID=cds-WP_025301576.1;Parent=gene-IY40_RS02035;Dbxref=GenBank:WP_025301576.1;Name=WP_025301576.1;Ontology_term=GO:0006605,GO:0006886,GO:0017038,GO:0005524;gbkey=CDS;gene=secA;go_function=ATP binding|0005524||IEA;go_process=protein targeting|0006605||IEA,intracellular protein transport|0006886||IEA,protein import|0017038||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005167086.1;locus_tag=IY40_RS02035;product=preprotein translocase subunit SecA;protein_id=WP_025301576.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 84280 84810 . - . ID=gene-IY40_RS02040;Name=secM;gbkey=Gene;gene=secM;gene_biotype=protein_coding;locus_tag=IY40_RS02040;old_locus_tag=IY40_02070 NZ_JPQY01000003.1 Protein Homology CDS 84280 84810 . - 0 ID=cds-WP_043135919.1;Parent=gene-IY40_RS02040;Dbxref=GenBank:WP_043135919.1;Name=WP_043135919.1;Ontology_term=GO:0045182;gbkey=CDS;gene=secM;go_function=translation regulator activity|0045182||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019083972.1;locus_tag=IY40_RS02040;product=secA translation cis-regulator SecM;protein_id=WP_043135919.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 84837 85352 . + . ID=gene-IY40_RS02045;Name=IY40_RS02045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS02045;old_locus_tag=IY40_02075 NZ_JPQY01000003.1 Protein Homology CDS 84837 85352 . + 0 ID=cds-WP_025301574.1;Parent=gene-IY40_RS02045;Dbxref=GenBank:WP_025301574.1;Name=WP_025301574.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210428.1;locus_tag=IY40_RS02045;product=DUF721 domain-containing protein;protein_id=WP_025301574.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 85467 86384 . - . ID=gene-IY40_RS02050;Name=lpxC;gbkey=Gene;gene=lpxC;gene_biotype=protein_coding;locus_tag=IY40_RS02050;old_locus_tag=IY40_02080 NZ_JPQY01000003.1 Protein Homology CDS 85467 86384 . - 0 ID=cds-WP_004932754.1;Parent=gene-IY40_RS02050;Dbxref=GenBank:WP_004932754.1;Name=WP_004932754.1;Ontology_term=GO:0009245,GO:0103117;gbkey=CDS;gene=lpxC;go_function=UDP-3-O-acyl-N-acetylglucosamine deacetylase activity|0103117||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459139.1;locus_tag=IY40_RS02050;product=UDP-3-O-acyl-N-acetylglucosamine deacetylase;protein_id=WP_004932754.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 86488 87642 . - . ID=gene-IY40_RS02055;Name=ftsZ;gbkey=Gene;gene=ftsZ;gene_biotype=protein_coding;locus_tag=IY40_RS02055;old_locus_tag=IY40_02085 NZ_JPQY01000003.1 Protein Homology CDS 86488 87642 . - 0 ID=cds-WP_004932757.1;Parent=gene-IY40_RS02055;Dbxref=GenBank:WP_004932757.1;Name=WP_004932757.1;Ontology_term=GO:0000910,GO:0003924,GO:0005525;gbkey=CDS;gene=ftsZ;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015965916.1;locus_tag=IY40_RS02055;product=cell division protein FtsZ;protein_id=WP_004932757.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 87717 88973 . - . ID=gene-IY40_RS02060;Name=ftsA;gbkey=Gene;gene=ftsA;gene_biotype=protein_coding;locus_tag=IY40_RS02060;old_locus_tag=IY40_02090 NZ_JPQY01000003.1 Protein Homology CDS 87717 88973 . - 0 ID=cds-WP_004932758.1;Parent=gene-IY40_RS02060;Dbxref=GenBank:WP_004932758.1;Name=WP_004932758.1;Ontology_term=GO:0051301,GO:0005515;gbkey=CDS;gene=ftsA;go_function=protein binding|0005515||IEA;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225115.1;locus_tag=IY40_RS02060;product=cell division protein FtsA;protein_id=WP_004932758.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 88970 89821 . - . ID=gene-IY40_RS02065;Name=ftsQ;gbkey=Gene;gene=ftsQ;gene_biotype=protein_coding;locus_tag=IY40_RS02065;old_locus_tag=IY40_02095 NZ_JPQY01000003.1 Protein Homology CDS 88970 89821 . - 0 ID=cds-WP_004932761.1;Parent=gene-IY40_RS02065;Dbxref=GenBank:WP_004932761.1;Name=WP_004932761.1;Ontology_term=GO:0090529;gbkey=CDS;gene=ftsQ;go_process=cell septum assembly|0090529||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004389002.1;locus_tag=IY40_RS02065;product=cell division protein FtsQ;protein_id=WP_004932761.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 89823 90743 . - . ID=gene-IY40_RS02070;Name=IY40_RS02070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS02070;old_locus_tag=IY40_02100 NZ_JPQY01000003.1 Protein Homology CDS 89823 90743 . - 0 ID=cds-WP_043135922.1;Parent=gene-IY40_RS02070;Dbxref=GenBank:WP_043135922.1;Name=WP_043135922.1;Ontology_term=GO:0009252,GO:0005524,GO:0008716,GO:0046872;gbkey=CDS;go_function=ATP binding|0005524||IEA,D-alanine-D-alanine ligase activity|0008716||IEA,metal ion binding|0046872||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210432.1;locus_tag=IY40_RS02070;product=D-alanine--D-alanine ligase;protein_id=WP_043135922.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 90736 92211 . - . ID=gene-IY40_RS02075;Name=murC;gbkey=Gene;gene=murC;gene_biotype=protein_coding;locus_tag=IY40_RS02075;old_locus_tag=IY40_02105 NZ_JPQY01000003.1 Protein Homology CDS 90736 92211 . - 0 ID=cds-WP_025301571.1;Parent=gene-IY40_RS02075;Dbxref=GenBank:WP_025301571.1;Name=WP_025301571.1;Ontology_term=GO:0009252,GO:0008763;gbkey=CDS;gene=murC;go_function=UDP-N-acetylmuramate-L-alanine ligase activity|0008763||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004932766.1;locus_tag=IY40_RS02075;product=UDP-N-acetylmuramate--L-alanine ligase;protein_id=WP_025301571.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 92296 93360 . - . ID=gene-IY40_RS02080;Name=murG;gbkey=Gene;gene=murG;gene_biotype=protein_coding;locus_tag=IY40_RS02080;old_locus_tag=IY40_02110 NZ_JPQY01000003.1 Protein Homology CDS 92296 93360 . - 0 ID=cds-WP_004932773.1;Parent=gene-IY40_RS02080;Dbxref=GenBank:WP_004932773.1;Name=WP_004932773.1;Ontology_term=GO:0009252,GO:0050511;gbkey=CDS;gene=murG;go_function=undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase activity|0050511||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004955375.1;locus_tag=IY40_RS02080;product=undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase;protein_id=WP_004932773.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 93364 94566 . - . ID=gene-IY40_RS02085;Name=ftsW;gbkey=Gene;gene=ftsW;gene_biotype=protein_coding;locus_tag=IY40_RS02085;old_locus_tag=IY40_02115 NZ_JPQY01000003.1 Protein Homology CDS 93364 94566 . - 0 ID=cds-WP_025301570.1;Parent=gene-IY40_RS02085;Dbxref=GenBank:WP_025301570.1;Name=WP_025301570.1;Ontology_term=GO:0051301;gbkey=CDS;gene=ftsW;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006317607.1;locus_tag=IY40_RS02085;product=cell division protein FtsW;protein_id=WP_025301570.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 94563 95882 . - . ID=gene-IY40_RS02090;Name=murD;gbkey=Gene;gene=murD;gene_biotype=protein_coding;locus_tag=IY40_RS02090;old_locus_tag=IY40_02120 NZ_JPQY01000003.1 Protein Homology CDS 94563 95882 . - 0 ID=cds-WP_025301569.1;Parent=gene-IY40_RS02090;Dbxref=GenBank:WP_025301569.1;Name=WP_025301569.1;Ontology_term=GO:0008360,GO:0009252,GO:0051301,GO:0005524,GO:0008764,GO:0005737;gbkey=CDS;gene=murD;go_component=cytoplasm|0005737||IEA;go_function=ATP binding|0005524||IEA,UDP-N-acetylmuramoylalanine-D-glutamate ligase activity|0008764||IEA;go_process=regulation of cell shape|0008360||IEA,peptidoglycan biosynthetic process|0009252||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015670915.1;locus_tag=IY40_RS02090;product=UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase;protein_id=WP_025301569.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 95885 96967 . - . ID=gene-IY40_RS02095;Name=mraY;gbkey=Gene;gene=mraY;gene_biotype=protein_coding;locus_tag=IY40_RS02095;old_locus_tag=IY40_02125 NZ_JPQY01000003.1 Protein Homology CDS 95885 96967 . - 0 ID=cds-WP_004932782.1;Parent=gene-IY40_RS02095;Dbxref=GenBank:WP_004932782.1;Name=WP_004932782.1;Ontology_term=GO:0009252,GO:0008963,GO:0016020;gbkey=CDS;gene=mraY;go_component=membrane|0016020||IEA;go_function=phospho-N-acetylmuramoyl-pentapeptide-transferase activity|0008963||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124610.1;locus_tag=IY40_RS02095;product=phospho-N-acetylmuramoyl-pentapeptide-transferase;protein_id=WP_004932782.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 96961 98322 . - . ID=gene-IY40_RS02100;Name=murF;gbkey=Gene;gene=murF;gene_biotype=protein_coding;locus_tag=IY40_RS02100;old_locus_tag=IY40_02130 NZ_JPQY01000003.1 Protein Homology CDS 96961 98322 . - 0 ID=cds-WP_043135927.1;Parent=gene-IY40_RS02100;Dbxref=GenBank:WP_043135927.1;Name=WP_043135927.1;Ontology_term=GO:0009058,GO:0071555,GO:0005524,GO:0047480;gbkey=CDS;gene=murF;go_function=ATP binding|0005524||IEA,UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity|0047480||IEA;go_process=biosynthetic process|0009058||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011191733.1;locus_tag=IY40_RS02100;product=UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase;protein_id=WP_043135927.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 98319 99806 . - . ID=gene-IY40_RS02105;Name=murE;gbkey=Gene;gene=murE;gene_biotype=protein_coding;locus_tag=IY40_RS02105;old_locus_tag=IY40_02135 NZ_JPQY01000003.1 Protein Homology CDS 98319 99806 . - 0 ID=cds-WP_043135929.1;Parent=gene-IY40_RS02105;Dbxref=GenBank:WP_043135929.1;Name=WP_043135929.1;Ontology_term=GO:0008360,GO:0009058,GO:0051301,GO:0005524,GO:0016881;gbkey=CDS;gene=murE;go_function=ATP binding|0005524||IEA,acid-amino acid ligase activity|0016881||IEA;go_process=regulation of cell shape|0008360||IEA,biosynthetic process|0009058||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014916653.1;locus_tag=IY40_RS02105;product=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2%2C6-diaminopimelate ligase;protein_id=WP_043135929.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 99793 101556 . - . ID=gene-IY40_RS02110;Name=IY40_RS02110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS02110;old_locus_tag=IY40_02140 NZ_JPQY01000003.1 Protein Homology CDS 99793 101556 . - 0 ID=cds-WP_004932790.1;Parent=gene-IY40_RS02110;Dbxref=GenBank:WP_004932790.1;Name=WP_004932790.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000642196.1;locus_tag=IY40_RS02110;product=peptidoglycan glycosyltransferase FtsI;protein_id=WP_004932790.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 101599 101919 . - . ID=gene-IY40_RS02115;Name=ftsL;gbkey=Gene;gene=ftsL;gene_biotype=protein_coding;locus_tag=IY40_RS02115;old_locus_tag=IY40_02145 NZ_JPQY01000003.1 Protein Homology CDS 101599 101919 . - 0 ID=cds-WP_025301566.1;Parent=gene-IY40_RS02115;Dbxref=GenBank:WP_025301566.1;Name=WP_025301566.1;gbkey=CDS;gene=ftsL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006709583.1;locus_tag=IY40_RS02115;product=cell division protein FtsL;protein_id=WP_025301566.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 101916 102857 . - . ID=gene-IY40_RS02120;Name=rsmH;gbkey=Gene;gene=rsmH;gene_biotype=protein_coding;locus_tag=IY40_RS02120;old_locus_tag=IY40_02150 NZ_JPQY01000003.1 Protein Homology CDS 101916 102857 . - 0 ID=cds-WP_025301565.1;Parent=gene-IY40_RS02120;Dbxref=GenBank:WP_025301565.1;Name=WP_025301565.1;Ontology_term=GO:0000154,GO:0016434;gbkey=CDS;gene=rsmH;go_function=rRNA (cytosine) methyltransferase activity|0016434||IEA;go_process=rRNA modification|0000154||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016929092.1;locus_tag=IY40_RS02120;product=16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH;protein_id=WP_025301565.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 102860 103318 . - . ID=gene-IY40_RS02125;Name=mraZ;gbkey=Gene;gene=mraZ;gene_biotype=protein_coding;locus_tag=IY40_RS02125;old_locus_tag=IY40_02155 NZ_JPQY01000003.1 Protein Homology CDS 102860 103318 . - 0 ID=cds-WP_025159638.1;Parent=gene-IY40_RS02125;Dbxref=GenBank:WP_025159638.1;Name=WP_025159638.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=mraZ;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005167064.1;locus_tag=IY40_RS02125;product=division/cell wall cluster transcriptional repressor MraZ;protein_id=WP_025159638.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 104184 104624 . + . ID=gene-IY40_RS02130;Name=IY40_RS02130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS02130;old_locus_tag=IY40_02160 NZ_JPQY01000003.1 Protein Homology CDS 104184 104624 . + 0 ID=cds-WP_025301564.1;Parent=gene-IY40_RS02130;Dbxref=GenBank:WP_025301564.1;Name=WP_025301564.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210446.1;locus_tag=IY40_RS02130;product=L-alanine exporter AlaE;protein_id=WP_025301564.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 104662 105666 . - . ID=gene-IY40_RS02135;Name=cra;gbkey=Gene;gene=cra;gene_biotype=protein_coding;locus_tag=IY40_RS02135;old_locus_tag=IY40_02165 NZ_JPQY01000003.1 Protein Homology CDS 104662 105666 . - 0 ID=cds-WP_025301563.1;Parent=gene-IY40_RS02135;Dbxref=GenBank:WP_025301563.1;Name=WP_025301563.1;Ontology_term=GO:0006355,GO:0009750,GO:0003677;gbkey=CDS;gene=cra;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,response to fructose|0009750||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459123.1;locus_tag=IY40_RS02135;product=catabolite repressor/activator;protein_id=WP_025301563.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 105885 106376 . - . ID=gene-IY40_RS02140;Name=ilvN;gbkey=Gene;gene=ilvN;gene_biotype=protein_coding;locus_tag=IY40_RS02140;old_locus_tag=IY40_02170 NZ_JPQY01000003.1 Protein Homology CDS 105885 106376 . - 0 ID=cds-WP_004932806.1;Parent=gene-IY40_RS02140;Dbxref=GenBank:WP_004932806.1;Name=WP_004932806.1;Ontology_term=GO:0009082,GO:1990610;gbkey=CDS;gene=ilvN;go_function=acetolactate synthase regulator activity|1990610||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001563086.1;locus_tag=IY40_RS02140;product=acetolactate synthase small subunit;protein_id=WP_004932806.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 106379 108097 . - . ID=gene-IY40_RS02145;Name=ilvI;gbkey=Gene;gene=ilvI;gene_biotype=protein_coding;locus_tag=IY40_RS02145;old_locus_tag=IY40_02175 NZ_JPQY01000003.1 Protein Homology CDS 106379 108097 . - 0 ID=cds-WP_043135936.1;Parent=gene-IY40_RS02145;Dbxref=GenBank:WP_043135936.1;Name=WP_043135936.1;Ontology_term=GO:0009082,GO:0000287,GO:0003984,GO:0030976,GO:0050660;gbkey=CDS;gene=ilvI;go_function=magnesium ion binding|0000287||IEA,acetolactate synthase activity|0003984||IEA,thiamine pyrophosphate binding|0030976||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_025294.2;locus_tag=IY40_RS02145;product=acetolactate synthase 3 large subunit;protein_id=WP_043135936.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 108414 110222 . - . ID=gene-IY40_RS02150;Name=IY40_RS02150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS02150;old_locus_tag=IY40_02180 NZ_JPQY01000003.1 Protein Homology CDS 108414 110222 . - 0 ID=cds-WP_043135941.1;Parent=gene-IY40_RS02150;Dbxref=GenBank:WP_043135941.1;Name=WP_043135941.1;Ontology_term=GO:0005524,GO:0015645;gbkey=CDS;go_function=ATP binding|0005524||IEA,fatty acid ligase activity|0015645||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004950117.1;locus_tag=IY40_RS02150;product=AMP-dependent synthetase/ligase;protein_id=WP_043135941.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 110688 111635 . - . ID=gene-IY40_RS02155;Name=leuO;gbkey=Gene;gene=leuO;gene_biotype=protein_coding;locus_tag=IY40_RS02155;old_locus_tag=IY40_02185 NZ_JPQY01000003.1 Protein Homology CDS 110688 111635 . - 0 ID=cds-WP_043135943.1;Parent=gene-IY40_RS02155;Dbxref=GenBank:WP_043135943.1;Name=WP_043135943.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=leuO;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004950115.1;locus_tag=IY40_RS02155;product=transcriptional regulator LeuO;protein_id=WP_043135943.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 112508 114082 . + . ID=gene-IY40_RS02160;Name=leuA;gbkey=Gene;gene=leuA;gene_biotype=protein_coding;locus_tag=IY40_RS02160;old_locus_tag=IY40_02190 NZ_JPQY01000003.1 Protein Homology CDS 112508 114082 . + 0 ID=cds-WP_033641848.1;Parent=gene-IY40_RS02160;Dbxref=GenBank:WP_033641848.1;Name=WP_033641848.1;Ontology_term=GO:0019752,GO:0003852;gbkey=CDS;gene=leuA;go_function=2-isopropylmalate synthase activity|0003852||IEA;go_process=carboxylic acid metabolic process|0019752||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016831521.1;locus_tag=IY40_RS02160;product=2-isopropylmalate synthase;protein_id=WP_033641848.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 114085 115176 . + . ID=gene-IY40_RS02165;Name=leuB;gbkey=Gene;gene=leuB;gene_biotype=protein_coding;locus_tag=IY40_RS02165;old_locus_tag=IY40_02195 NZ_JPQY01000003.1 Protein Homology CDS 114085 115176 . + 0 ID=cds-WP_025159635.1;Parent=gene-IY40_RS02165;Dbxref=GenBank:WP_025159635.1;Name=WP_025159635.1;Ontology_term=GO:0009098,GO:0003862;gbkey=CDS;gene=leuB;go_function=3-isopropylmalate dehydrogenase activity|0003862||IEA;go_process=L-leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010298064.1;locus_tag=IY40_RS02165;product=3-isopropylmalate dehydrogenase;protein_id=WP_025159635.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 115178 116578 . + . ID=gene-IY40_RS02170;Name=leuC;gbkey=Gene;gene=leuC;gene_biotype=protein_coding;locus_tag=IY40_RS02170;old_locus_tag=IY40_02200 NZ_JPQY01000003.1 Protein Homology CDS 115178 116578 . + 0 ID=cds-WP_025301558.1;Parent=gene-IY40_RS02170;Dbxref=GenBank:WP_025301558.1;Name=WP_025301558.1;Ontology_term=GO:0009098,GO:0003861,GO:0051539,GO:0009316;gbkey=CDS;gene=leuC;go_component=3-isopropylmalate dehydratase complex|0009316||IEA;go_function=3-isopropylmalate dehydratase activity|0003861||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=L-leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012005194.1;locus_tag=IY40_RS02170;product=3-isopropylmalate dehydratase large subunit;protein_id=WP_025301558.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 116588 117190 . + . ID=gene-IY40_RS02175;Name=leuD;gbkey=Gene;gene=leuD;gene_biotype=protein_coding;locus_tag=IY40_RS02175;old_locus_tag=IY40_02205 NZ_JPQY01000003.1 Protein Homology CDS 116588 117190 . + 0 ID=cds-WP_043135950.1;Parent=gene-IY40_RS02175;Dbxref=GenBank:WP_043135950.1;Name=WP_043135950.1;Ontology_term=GO:0009098,GO:0003861,GO:0009316;gbkey=CDS;gene=leuD;go_component=3-isopropylmalate dehydratase complex|0009316||IEA;go_function=3-isopropylmalate dehydratase activity|0003861||IEA;go_process=L-leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012005193.1;locus_tag=IY40_RS02175;product=3-isopropylmalate dehydratase small subunit;protein_id=WP_043135950.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 117228 118700 . - . ID=gene-IY40_RS02180;Name=IY40_RS02180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS02180;old_locus_tag=IY40_02210 NZ_JPQY01000003.1 Protein Homology CDS 117228 118700 . - 0 ID=cds-WP_025301557.1;Parent=gene-IY40_RS02180;Dbxref=GenBank:WP_025301557.1;Name=WP_025301557.1;Ontology_term=GO:0006820,GO:0008509,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=monoatomic anion transmembrane transporter activity|0008509||IEA;go_process=monoatomic anion transport|0006820||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004950104.1;locus_tag=IY40_RS02180;product=DASS family sodium-coupled anion symporter;protein_id=WP_025301557.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 118845 120041 . - . ID=gene-IY40_RS02185;Name=IY40_RS02185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS02185;old_locus_tag=IY40_02215 NZ_JPQY01000003.1 Protein Homology CDS 118845 120041 . - 0 ID=cds-WP_025301556.1;Parent=gene-IY40_RS02185;Dbxref=GenBank:WP_025301556.1;Name=WP_025301556.1;Ontology_term=GO:0008643,GO:0005351,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=carbohydrate:proton symporter activity|0005351||IEA;go_process=carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016929103.1;locus_tag=IY40_RS02185;product=sugar efflux transporter;protein_id=WP_025301556.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 120196 120369 . - . ID=gene-IY40_RS24985;Name=sgrT;gbkey=Gene;gene=sgrT;gene_biotype=protein_coding;locus_tag=IY40_RS24985 NZ_JPQY01000003.1 Protein Homology CDS 120196 120369 . - 0 ID=cds-WP_071826098.1;Parent=gene-IY40_RS24985;Dbxref=GenBank:WP_071826098.1;Name=WP_071826098.1;Ontology_term=GO:0046325;gbkey=CDS;gene=sgrT;go_process=negative regulation of D-glucose import|0046325||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016929104.1;locus_tag=IY40_RS24985;product=glucose uptake inhibitor SgrT;protein_id=WP_071826098.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 120460 122121 . + . ID=gene-IY40_RS02190;Name=sgrR;gbkey=Gene;gene=sgrR;gene_biotype=protein_coding;locus_tag=IY40_RS02190;old_locus_tag=IY40_02225 NZ_JPQY01000003.1 Protein Homology CDS 120460 122121 . + 0 ID=cds-WP_043135953.1;Parent=gene-IY40_RS02190;Dbxref=GenBank:WP_043135953.1;Name=WP_043135953.1;gbkey=CDS;gene=sgrR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011191725.1;locus_tag=IY40_RS02190;product=HTH-type transcriptional regulator SgrR;protein_id=WP_043135953.1;transl_table=11 NZ_JPQY01000003.1 cmsearch riboswitch 122159 122278 . + . ID=id-NZ_JPQY01000003.1:122159..122278;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_JPQY01000003.1 RefSeq gene 122336 123322 . + . ID=gene-IY40_RS02195;Name=thiB;gbkey=Gene;gene=thiB;gene_biotype=protein_coding;locus_tag=IY40_RS02195;old_locus_tag=IY40_02230 NZ_JPQY01000003.1 Protein Homology CDS 122336 123322 . + 0 ID=cds-WP_043135956.1;Parent=gene-IY40_RS02195;Dbxref=GenBank:WP_043135956.1;Name=WP_043135956.1;Ontology_term=GO:0015888,GO:0030975,GO:0048502,GO:0030288,GO:0055052;gbkey=CDS;gene=thiB;go_component=outer membrane-bounded periplasmic space|0030288||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=thiamine binding|0030975||IEA,ABC-type thiamine transporter activity|0048502||IEA;go_process=thiamine transport|0015888||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414610.1;locus_tag=IY40_RS02195;product=thiamine ABC transporter substrate binding subunit;protein_id=WP_043135956.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 123298 124905 . + . ID=gene-IY40_RS02200;Name=thiP;gbkey=Gene;gene=thiP;gene_biotype=protein_coding;locus_tag=IY40_RS02200;old_locus_tag=IY40_02235 NZ_JPQY01000003.1 Protein Homology CDS 123298 124905 . + 0 ID=cds-WP_043135960.1;Parent=gene-IY40_RS02200;Dbxref=GenBank:WP_043135960.1;Name=WP_043135960.1;Ontology_term=GO:0015888,GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=thiP;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=thiamine transport|0015888||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002214276.1;locus_tag=IY40_RS02200;product=thiamine/thiamine pyrophosphate ABC transporter permease ThiP;protein_id=WP_043135960.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 124892 125596 . + . ID=gene-IY40_RS02205;Name=thiQ;gbkey=Gene;gene=thiQ;gene_biotype=protein_coding;locus_tag=IY40_RS02205;old_locus_tag=IY40_02240 NZ_JPQY01000003.1 Protein Homology CDS 124892 125596 . + 0 ID=cds-WP_025301552.1;Parent=gene-IY40_RS02205;Dbxref=GenBank:WP_025301552.1;Name=WP_025301552.1;gbkey=CDS;gene=thiQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004932851.1;locus_tag=IY40_RS02205;product=thiamine ABC transporter ATP-binding protein ThiQ;protein_id=WP_025301552.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 125685 125798 . + . ID=gene-IY40_RS25870;Name=ivbL;gbkey=Gene;gene=ivbL;gene_biotype=protein_coding;locus_tag=IY40_RS25870 NZ_JPQY01000003.1 Protein Homology CDS 125685 125798 . + 0 ID=cds-WP_154747116.1;Parent=gene-IY40_RS25870;Dbxref=GenBank:WP_154747116.1;Name=WP_154747116.1;gbkey=CDS;gene=ivbL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004855642.1;locus_tag=IY40_RS25870;product=ilvB operon leader peptide IvbL;protein_id=WP_154747116.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 125910 127604 . + . ID=gene-IY40_RS02210;Name=ilvB;gbkey=Gene;gene=ilvB;gene_biotype=protein_coding;locus_tag=IY40_RS02210;old_locus_tag=IY40_02245 NZ_JPQY01000003.1 Protein Homology CDS 125910 127604 . + 0 ID=cds-WP_033651682.1;Parent=gene-IY40_RS02210;Dbxref=GenBank:WP_033651682.1;Name=WP_033651682.1;Ontology_term=GO:0009082,GO:0000287,GO:0003984,GO:0030976,GO:0050660;gbkey=CDS;gene=ilvB;go_function=magnesium ion binding|0000287||IEA,acetolactate synthase activity|0003984||IEA,thiamine pyrophosphate binding|0030976||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013811477.1;locus_tag=IY40_RS02210;product=acetolactate synthase large subunit;protein_id=WP_033651682.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 127608 127901 . + . ID=gene-IY40_RS02215;Name=ilvN;gbkey=Gene;gene=ilvN;gene_biotype=protein_coding;locus_tag=IY40_RS02215;old_locus_tag=IY40_02250 NZ_JPQY01000003.1 Protein Homology CDS 127608 127901 . + 0 ID=cds-WP_016929110.1;Parent=gene-IY40_RS02215;Dbxref=GenBank:WP_016929110.1;Name=WP_016929110.1;gbkey=CDS;gene=ilvN;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004932856.1;locus_tag=IY40_RS02215;product=acetolactate synthase small subunit;protein_id=WP_016929110.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 127928 128698 . - . ID=gene-IY40_RS02220;Name=IY40_RS02220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS02220;old_locus_tag=IY40_02255 NZ_JPQY01000003.1 Protein Homology CDS 127928 128698 . - 0 ID=cds-WP_043135969.1;Parent=gene-IY40_RS02220;Dbxref=GenBank:WP_043135969.1;Name=WP_043135969.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015376631.1;locus_tag=IY40_RS02220;product=DedA family protein;protein_id=WP_043135969.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 128913 131279 . + . ID=gene-IY40_RS02225;Name=IY40_RS02225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS02225;old_locus_tag=IY40_02260 NZ_JPQY01000003.1 Protein Homology CDS 128913 131279 . + 0 ID=cds-WP_043135972.1;Parent=gene-IY40_RS02225;Dbxref=GenBank:WP_043135972.1;Name=WP_043135972.1;Ontology_term=GO:0000166,GO:0003676,GO:0003887;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,nucleic acid binding|0003676||IEA,DNA-directed DNA polymerase activity|0003887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005156939.1;locus_tag=IY40_RS02225;product=DNA polymerase II;protein_id=WP_043135972.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 131527 134433 . + . ID=gene-IY40_RS02230;Name=rapA;gbkey=Gene;gene=rapA;gene_biotype=protein_coding;locus_tag=IY40_RS02230;old_locus_tag=IY40_02265 NZ_JPQY01000003.1 Protein Homology CDS 131527 134433 . + 0 ID=cds-WP_043135975.1;Parent=gene-IY40_RS02230;Dbxref=GenBank:WP_043135975.1;Name=WP_043135975.1;Ontology_term=GO:0006355,GO:0005524,GO:0016817,GO:0140658;gbkey=CDS;gene=rapA;go_function=ATP binding|0005524||IEA,hydrolase activity%2C acting on acid anhydrides|0016817||IEA,ATP-dependent chromatin remodeler activity|0140658||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001117023.1;locus_tag=IY40_RS02230;product=RNA polymerase-associated protein RapA;protein_id=WP_043135975.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 134491 135141 . + . ID=gene-IY40_RS02235;Name=rluA;gbkey=Gene;gene=rluA;gene_biotype=protein_coding;locus_tag=IY40_RS02235;old_locus_tag=IY40_02270 NZ_JPQY01000003.1 Protein Homology CDS 134491 135141 . + 0 ID=cds-WP_043135978.1;Parent=gene-IY40_RS02235;Dbxref=GenBank:WP_043135978.1;Name=WP_043135978.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;gene=rluA;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004932866.1;locus_tag=IY40_RS02235;product=bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA;protein_id=WP_043135978.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 135187 136008 . - . ID=gene-IY40_RS02240;Name=djlA;gbkey=Gene;gene=djlA;gene_biotype=protein_coding;locus_tag=IY40_RS02240;old_locus_tag=IY40_02275 NZ_JPQY01000003.1 Protein Homology CDS 135187 136008 . - 0 ID=cds-WP_025301546.1;Parent=gene-IY40_RS02240;Dbxref=GenBank:WP_025301546.1;Name=WP_025301546.1;Ontology_term=GO:0051087;gbkey=CDS;gene=djlA;go_function=protein-folding chaperone binding|0051087||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013649226.1;locus_tag=IY40_RS02240;product=co-chaperone DjlA;protein_id=WP_025301546.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 136237 138597 . + . ID=gene-IY40_RS02245;Name=lptD;gbkey=Gene;gene=lptD;gene_biotype=protein_coding;locus_tag=IY40_RS02245;old_locus_tag=IY40_02280 NZ_JPQY01000003.1 Protein Homology CDS 136237 138597 . + 0 ID=cds-WP_043135981.1;Parent=gene-IY40_RS02245;Dbxref=GenBank:WP_043135981.1;Name=WP_043135981.1;Ontology_term=GO:0015920,GO:0043165,GO:0019867;gbkey=CDS;gene=lptD;go_component=outer membrane|0019867||IEA;go_process=lipopolysaccharide transport|0015920||IEA,Gram-negative-bacterium-type cell outer membrane assembly|0043165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012005178.1;locus_tag=IY40_RS02245;product=LPS assembly protein LptD;protein_id=WP_043135981.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 138663 139964 . + . ID=gene-IY40_RS02250;Name=surA;gbkey=Gene;gene=surA;gene_biotype=protein_coding;locus_tag=IY40_RS02250;old_locus_tag=IY40_02285 NZ_JPQY01000003.1 Protein Homology CDS 138663 139964 . + 0 ID=cds-WP_025301544.1;Parent=gene-IY40_RS02250;Dbxref=GenBank:WP_025301544.1;Name=WP_025301544.1;Ontology_term=GO:0006457,GO:0043165,GO:0050821,GO:0003755,GO:0042277,GO:0051082,GO:0030288;gbkey=CDS;gene=surA;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA,peptide binding|0042277||IEA,unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA,Gram-negative-bacterium-type cell outer membrane assembly|0043165||IEA,protein stabilization|0050821||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004932876.1;locus_tag=IY40_RS02250;product=peptidylprolyl isomerase SurA;protein_id=WP_025301544.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 139951 140943 . + . ID=gene-IY40_RS02255;Name=pdxA;gbkey=Gene;gene=pdxA;gene_biotype=protein_coding;locus_tag=IY40_RS02255;old_locus_tag=IY40_02290 NZ_JPQY01000003.1 Protein Homology CDS 139951 140943 . + 0 ID=cds-WP_043136304.1;Parent=gene-IY40_RS02255;Dbxref=GenBank:WP_043136304.1;Name=WP_043136304.1;Ontology_term=GO:0008615,GO:0050570;gbkey=CDS;gene=pdxA;go_function=4-hydroxythreonine-4-phosphate dehydrogenase activity|0050570||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA;inference=COORDINATES: protein motif:HMM:TIGR00557.1;locus_tag=IY40_RS02255;product=4-hydroxythreonine-4-phosphate dehydrogenase PdxA;protein_id=WP_043136304.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 140936 141754 . + . ID=gene-IY40_RS02260;Name=rsmA;gbkey=Gene;gene=rsmA;gene_biotype=protein_coding;locus_tag=IY40_RS02260;old_locus_tag=IY40_02295 NZ_JPQY01000003.1 Protein Homology CDS 140936 141754 . + 0 ID=cds-WP_025301542.1;Parent=gene-IY40_RS02260;Dbxref=GenBank:WP_025301542.1;Name=WP_025301542.1;Ontology_term=GO:0000154,GO:0006364,GO:0000179;gbkey=CDS;gene=rsmA;go_function=rRNA (adenine-N6%2CN6-)-dimethyltransferase activity|0000179||IEA;go_process=rRNA modification|0000154||IEA,rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012005175.1;locus_tag=IY40_RS02260;product=16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA;protein_id=WP_025301542.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 141767 142144 . + . ID=gene-IY40_RS02265;Name=apaG;gbkey=Gene;gene=apaG;gene_biotype=protein_coding;locus_tag=IY40_RS02265;old_locus_tag=IY40_02300 NZ_JPQY01000003.1 Protein Homology CDS 141767 142144 . + 0 ID=cds-WP_016929119.1;Parent=gene-IY40_RS02265;Dbxref=GenBank:WP_016929119.1;Name=WP_016929119.1;gbkey=CDS;gene=apaG;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225059.1;locus_tag=IY40_RS02265;product=Co2+/Mg2+ efflux protein ApaG;protein_id=WP_016929119.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 142147 142998 . + . ID=gene-IY40_RS02270;Name=apaH;gbkey=Gene;gene=apaH;gene_biotype=protein_coding;locus_tag=IY40_RS02270;old_locus_tag=IY40_02305 NZ_JPQY01000003.1 Protein Homology CDS 142147 142998 . + 0 ID=cds-WP_043135986.1;Parent=gene-IY40_RS02270;Dbxref=GenBank:WP_043135986.1;Name=WP_043135986.1;Ontology_term=GO:0008803;gbkey=CDS;gene=apaH;go_function=bis(5'-nucleosyl)-tetraphosphatase (symmetrical) activity|0008803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012005173.1;locus_tag=IY40_RS02270;product=bis(5'-nucleosyl)-tetraphosphatase (symmetrical) ApaH;protein_id=WP_043135986.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 143049 144938 . - . ID=gene-IY40_RS02275;Name=IY40_RS02275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS02275;old_locus_tag=IY40_02310 NZ_JPQY01000003.1 Protein Homology CDS 143049 144938 . - 0 ID=cds-WP_043135988.1;Parent=gene-IY40_RS02275;Dbxref=GenBank:WP_043135988.1;Name=WP_043135988.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012005172.1;locus_tag=IY40_RS02275;product=PhoX family protein;protein_id=WP_043135988.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 145119 145601 . - . ID=gene-IY40_RS02280;Name=folA;gbkey=Gene;gene=folA;gene_biotype=protein_coding;locus_tag=IY40_RS02280;old_locus_tag=IY40_02315 NZ_JPQY01000003.1 Protein Homology CDS 145119 145601 . - 0 ID=cds-WP_025301539.1;Parent=gene-IY40_RS02280;Dbxref=GenBank:WP_025301539.1;Name=WP_025301539.1;Ontology_term=GO:0046654,GO:0004146;gbkey=CDS;gene=folA;go_function=dihydrofolate reductase activity|0004146||IEA;go_process=tetrahydrofolate biosynthetic process|0046654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005270605.1;locus_tag=IY40_RS02280;product=type 3 dihydrofolate reductase;protein_id=WP_025301539.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 145745 146209 . - . ID=gene-IY40_RS02285;Name=IY40_RS02285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS02285;old_locus_tag=IY40_02320 NZ_JPQY01000003.1 Protein Homology CDS 145745 146209 . - 0 ID=cds-WP_015376621.1;Parent=gene-IY40_RS02285;Dbxref=GenBank:WP_015376621.1;Name=WP_015376621.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210498.1;locus_tag=IY40_RS02285;product=threonine/serine exporter;protein_id=WP_015376621.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 146206 147006 . - . ID=gene-IY40_RS02290;Name=IY40_RS02290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS02290;old_locus_tag=IY40_02325 NZ_JPQY01000003.1 Protein Homology CDS 146206 147006 . - 0 ID=cds-WP_043135990.1;Parent=gene-IY40_RS02290;Dbxref=GenBank:WP_043135990.1;Name=WP_043135990.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004950061.1;locus_tag=IY40_RS02290;product=threonine/serine exporter family protein;protein_id=WP_043135990.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 147134 147748 . + . ID=gene-IY40_RS02295;Name=IY40_RS02295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS02295;old_locus_tag=IY40_02330 NZ_JPQY01000003.1 Protein Homology CDS 147134 147748 . + 0 ID=cds-WP_025301536.1;Parent=gene-IY40_RS02295;Dbxref=GenBank:WP_025301536.1;Name=WP_025301536.1;Ontology_term=GO:0006865,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012005168.1;locus_tag=IY40_RS02295;product=LysE family translocator;protein_id=WP_025301536.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 147785 149638 . - . ID=gene-IY40_RS02300;Name=kefC;gbkey=Gene;gene=kefC;gene_biotype=protein_coding;locus_tag=IY40_RS02300;old_locus_tag=IY40_02335 NZ_JPQY01000003.1 Protein Homology CDS 147785 149638 . - 0 ID=cds-WP_025301535.1;Parent=gene-IY40_RS02300;Dbxref=GenBank:WP_025301535.1;Name=WP_025301535.1;Ontology_term=GO:0006813,GO:0015503;gbkey=CDS;gene=kefC;go_function=glutathione-regulated potassium exporter activity|0015503||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016929125.1;locus_tag=IY40_RS02300;product=glutathione-regulated potassium-efflux system protein KefC;protein_id=WP_025301535.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 149631 150188 . - . ID=gene-IY40_RS02305;Name=kefF;gbkey=Gene;gene=kefF;gene_biotype=protein_coding;locus_tag=IY40_RS02305;old_locus_tag=IY40_02340 NZ_JPQY01000003.1 Protein Homology CDS 149631 150188 . - 0 ID=cds-WP_025301534.1;Parent=gene-IY40_RS02305;Dbxref=GenBank:WP_025301534.1;Name=WP_025301534.1;Ontology_term=GO:0006813;gbkey=CDS;gene=kefF;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006323558.1;locus_tag=IY40_RS02305;product=glutathione-regulated potassium-efflux system oxidoreductase KefF;protein_id=WP_025301534.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 150360 153584 . - . ID=gene-IY40_RS02310;Name=carB;gbkey=Gene;gene=carB;gene_biotype=protein_coding;locus_tag=IY40_RS02310;old_locus_tag=IY40_02345 NZ_JPQY01000003.1 Protein Homology CDS 150360 153584 . - 0 ID=cds-WP_025301533.1;Parent=gene-IY40_RS02310;Dbxref=GenBank:WP_025301533.1;Name=WP_025301533.1;Ontology_term=GO:0008152,GO:0005524,GO:0046872;gbkey=CDS;gene=carB;go_function=ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225053.1;locus_tag=IY40_RS02310;product=carbamoyl-phosphate synthase large subunit;protein_id=WP_025301533.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 153601 154749 . - . ID=gene-IY40_RS02315;Name=carA;gbkey=Gene;gene=carA;gene_biotype=protein_coding;locus_tag=IY40_RS02315;old_locus_tag=IY40_02350 NZ_JPQY01000003.1 Protein Homology CDS 153601 154749 . - 0 ID=cds-WP_071826157.1;Parent=gene-IY40_RS02315;Dbxref=GenBank:WP_071826157.1;Name=WP_071826157.1;Ontology_term=GO:0006207,GO:0006541,GO:0004088;gbkey=CDS;gene=carA;go_function=carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity|0004088||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA,glutamine metabolic process|0006541||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010616648.1;locus_tag=IY40_RS02315;product=glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit;protein_id=WP_071826157.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 155220 156041 . - . ID=gene-IY40_RS02320;Name=dapB;gbkey=Gene;gene=dapB;gene_biotype=protein_coding;locus_tag=IY40_RS02320;old_locus_tag=IY40_02355 NZ_JPQY01000003.1 Protein Homology CDS 155220 156041 . - 0 ID=cds-WP_043135993.1;Parent=gene-IY40_RS02320;Dbxref=GenBank:WP_043135993.1;Name=WP_043135993.1;Ontology_term=GO:0009089,GO:0008839;gbkey=CDS;gene=dapB;go_function=4-hydroxy-tetrahydrodipicolinate reductase|0008839||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012005163.1;locus_tag=IY40_RS02320;product=4-hydroxy-tetrahydrodipicolinate reductase;protein_id=WP_043135993.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 156305 157564 . - . ID=gene-IY40_RS02325;Name=IY40_RS02325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS02325;old_locus_tag=IY40_02360 NZ_JPQY01000003.1 Protein Homology CDS 156305 157564 . - 0 ID=cds-WP_025301530.1;Parent=gene-IY40_RS02325;Dbxref=GenBank:WP_025301530.1;Name=WP_025301530.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004932926.1;locus_tag=IY40_RS02325;product=glycosyltransferase;protein_id=WP_025301530.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 157589 158452 . - . ID=gene-IY40_RS02330;Name=IY40_RS02330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS02330;old_locus_tag=IY40_02365 NZ_JPQY01000003.1 Protein Homology CDS 157589 158452 . - 0 ID=cds-WP_025301529.1;Parent=gene-IY40_RS02330;Dbxref=GenBank:WP_025301529.1;Name=WP_025301529.1;Ontology_term=GO:0016491,GO:0046872;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013811455.1;locus_tag=IY40_RS02330;product=TauD/TfdA dioxygenase family protein;protein_id=WP_025301529.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 158548 159513 . - . ID=gene-IY40_RS02335;Name=pvcA;gbkey=Gene;gene=pvcA;gene_biotype=protein_coding;locus_tag=IY40_RS02335;old_locus_tag=IY40_02370 NZ_JPQY01000003.1 Protein Homology CDS 158548 159513 . - 0 ID=cds-WP_025301528.1;Parent=gene-IY40_RS02335;Dbxref=GenBank:WP_025301528.1;Name=WP_025301528.1;Ontology_term=GO:0016829;gbkey=CDS;gene=pvcA;go_function=lyase activity|0016829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017891565.1;locus_tag=IY40_RS02335;product=L-tyrosine isonitrile synthase;protein_id=WP_025301528.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 159705 160631 . + . ID=gene-IY40_RS02340;Name=IY40_RS02340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS02340;old_locus_tag=IY40_02375 NZ_JPQY01000003.1 Protein Homology CDS 159705 160631 . + 0 ID=cds-WP_043135997.1;Parent=gene-IY40_RS02340;Dbxref=GenBank:WP_043135997.1;Name=WP_043135997.1;Ontology_term=GO:0006355,GO:0001216,GO:0032993;gbkey=CDS;go_component=protein-DNA complex|0032993||IEA;go_function=DNA-binding transcription activator activity|0001216||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004932941.1;locus_tag=IY40_RS02340;product=LysR family transcriptional regulator;protein_id=WP_043135997.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 160904 161857 . - . ID=gene-IY40_RS02345;Name=ispH;gbkey=Gene;gene=ispH;gene_biotype=protein_coding;gene_synonym=lytB;locus_tag=IY40_RS02345;old_locus_tag=IY40_02380 NZ_JPQY01000003.1 Protein Homology CDS 160904 161857 . - 0 ID=cds-WP_043136000.1;Parent=gene-IY40_RS02345;Dbxref=GenBank:WP_043136000.1;Name=WP_043136000.1;Ontology_term=GO:0019288,GO:0050992,GO:0046872,GO:0051745;gbkey=CDS;gene=ispH;go_function=metal ion binding|0046872||IEA,4-hydroxy-3-methylbut-2-enyl diphosphate reductase activity|0051745||IEA;go_process=isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA,dimethylallyl diphosphate biosynthetic process|0050992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005166985.1;locus_tag=IY40_RS02345;product=4-hydroxy-3-methylbut-2-enyl diphosphate reductase;protein_id=WP_043136000.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 161838 162308 . - . ID=gene-IY40_RS02350;Name=fkpB;gbkey=Gene;gene=fkpB;gene_biotype=protein_coding;locus_tag=IY40_RS02350;old_locus_tag=IY40_02385 NZ_JPQY01000003.1 Protein Homology CDS 161838 162308 . - 0 ID=cds-WP_038628869.1;Parent=gene-IY40_RS02350;Dbxref=GenBank:WP_038628869.1;Name=WP_038628869.1;Ontology_term=GO:0003755;gbkey=CDS;gene=fkpB;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012005151.1;locus_tag=IY40_RS02350;product=FKBP-type peptidyl-prolyl cis-trans isomerase;protein_id=WP_038628869.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 162310 162819 . - . ID=gene-IY40_RS02355;Name=lspA;gbkey=Gene;gene=lspA;gene_biotype=protein_coding;locus_tag=IY40_RS02355;old_locus_tag=IY40_02390 NZ_JPQY01000003.1 Protein Homology CDS 162310 162819 . - 0 ID=cds-WP_025301524.1;Parent=gene-IY40_RS02355;Dbxref=GenBank:WP_025301524.1;Name=WP_025301524.1;Ontology_term=GO:0006508,GO:0009306,GO:0004190,GO:0005886;gbkey=CDS;gene=lspA;go_component=plasma membrane|0005886||IEA;go_function=aspartic-type endopeptidase activity|0004190||IEA;go_process=proteolysis|0006508||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012005150.1;locus_tag=IY40_RS02355;product=signal peptidase II;protein_id=WP_025301524.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 162833 165649 . - . ID=gene-IY40_RS02360;Name=ileS;gbkey=Gene;gene=ileS;gene_biotype=protein_coding;locus_tag=IY40_RS02360;old_locus_tag=IY40_02395 NZ_JPQY01000003.1 Protein Homology CDS 162833 165649 . - 0 ID=cds-WP_025301523.1;Parent=gene-IY40_RS02360;Dbxref=GenBank:WP_025301523.1;Name=WP_025301523.1;Ontology_term=GO:0006428,GO:0000166,GO:0004822,GO:0005524;gbkey=CDS;gene=ileS;go_function=nucleotide binding|0000166||IEA,isoleucine-tRNA ligase activity|0004822||IEA,ATP binding|0005524||IEA;go_process=isoleucyl-tRNA aminoacylation|0006428||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_705981.1;locus_tag=IY40_RS02360;product=isoleucine--tRNA ligase;protein_id=WP_025301523.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 165682 166620 . - . ID=gene-IY40_RS02365;Name=ribF;gbkey=Gene;gene=ribF;gene_biotype=protein_coding;locus_tag=IY40_RS02365;old_locus_tag=IY40_02400 NZ_JPQY01000003.1 Protein Homology CDS 165682 166620 . - 0 ID=cds-WP_025301522.1;Parent=gene-IY40_RS02365;Dbxref=GenBank:WP_025301522.1;Name=WP_025301522.1;Ontology_term=GO:0003919;gbkey=CDS;gene=ribF;go_function=FMN adenylyltransferase activity|0003919||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005166981.1;locus_tag=IY40_RS02365;product=bifunctional riboflavin kinase/FAD synthetase;protein_id=WP_025301522.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 167011 167274 . + . ID=gene-IY40_RS02370;Name=rpsT;gbkey=Gene;gene=rpsT;gene_biotype=protein_coding;locus_tag=IY40_RS02370;old_locus_tag=IY40_02405 NZ_JPQY01000003.1 Protein Homology CDS 167011 167274 . + 0 ID=cds-WP_004932960.1;Parent=gene-IY40_RS02370;Dbxref=GenBank:WP_004932960.1;Name=WP_004932960.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsT;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019080555.1;locus_tag=IY40_RS02370;product=30S ribosomal protein S20;protein_id=WP_004932960.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 167346 168245 . - . ID=gene-IY40_RS02375;Name=nhaR;gbkey=Gene;gene=nhaR;gene_biotype=protein_coding;locus_tag=IY40_RS02375;old_locus_tag=IY40_02410 NZ_JPQY01000003.1 Protein Homology CDS 167346 168245 . - 0 ID=cds-WP_004932962.1;Parent=gene-IY40_RS02375;Dbxref=GenBank:WP_004932962.1;Name=WP_004932962.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=nhaR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004932962.1;locus_tag=IY40_RS02375;product=transcriptional activator NhaR;protein_id=WP_004932962.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 168438 169604 . - . ID=gene-IY40_RS02380;Name=nhaA;gbkey=Gene;gene=nhaA;gene_biotype=protein_coding;locus_tag=IY40_RS02380;old_locus_tag=IY40_02415 NZ_JPQY01000003.1 Protein Homology CDS 168438 169604 . - 0 ID=cds-WP_025301521.1;Parent=gene-IY40_RS02380;Dbxref=GenBank:WP_025301521.1;Name=WP_025301521.1;Ontology_term=GO:0006814,GO:0006885,GO:0015385,GO:0016020;gbkey=CDS;gene=nhaA;go_component=membrane|0016020||IEA;go_function=sodium:proton antiporter activity|0015385||IEA;go_process=sodium ion transport|0006814||IEA,regulation of pH|0006885||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041418458.1;locus_tag=IY40_RS02380;product=Na+/H+ antiporter NhaA;protein_id=WP_025301521.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 169840 170964 . - . ID=gene-IY40_RS02385;Name=dnaJ;gbkey=Gene;gene=dnaJ;gene_biotype=protein_coding;locus_tag=IY40_RS02385;old_locus_tag=IY40_02420 NZ_JPQY01000003.1 Protein Homology CDS 169840 170964 . - 0 ID=cds-WP_004932969.1;Parent=gene-IY40_RS02385;Dbxref=GenBank:WP_004932969.1;Name=WP_004932969.1;Ontology_term=GO:0006457,GO:0009408,GO:0005515,GO:0005524;gbkey=CDS;gene=dnaJ;go_function=protein binding|0005515||IEA,ATP binding|0005524||IEA;go_process=protein folding|0006457||IEA,response to heat|0009408||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308042.1;locus_tag=IY40_RS02385;product=molecular chaperone DnaJ;protein_id=WP_004932969.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 171071 172984 . - . ID=gene-IY40_RS02390;Name=dnaK;gbkey=Gene;gene=dnaK;gene_biotype=protein_coding;locus_tag=IY40_RS02390;old_locus_tag=IY40_02425 NZ_JPQY01000003.1 Protein Homology CDS 171071 172984 . - 0 ID=cds-WP_004932972.1;Parent=gene-IY40_RS02390;Dbxref=GenBank:WP_004932972.1;Name=WP_004932972.1;Ontology_term=GO:0006457,GO:0005524,GO:0016887;gbkey=CDS;gene=dnaK;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001737966.1;locus_tag=IY40_RS02390;product=molecular chaperone DnaK;protein_id=WP_004932972.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 173309 173908 . + . ID=gene-IY40_RS02395;Name=satP;gbkey=Gene;gene=satP;gene_biotype=protein_coding;locus_tag=IY40_RS02395;old_locus_tag=IY40_02430 NZ_JPQY01000003.1 Protein Homology CDS 173309 173908 . + 0 ID=cds-WP_043136308.1;Parent=gene-IY40_RS02395;Dbxref=GenBank:WP_043136308.1;Name=WP_043136308.1;Ontology_term=GO:0016020;gbkey=CDS;gene=satP;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013811445.1;locus_tag=IY40_RS02395;product=acetate uptake transporter;protein_id=WP_043136308.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 173953 175260 . - . ID=gene-IY40_RS02400;Name=IY40_RS02400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS02400;old_locus_tag=IY40_02435 NZ_JPQY01000003.1 Protein Homology CDS 173953 175260 . - 0 ID=cds-WP_043136005.1;Parent=gene-IY40_RS02400;Dbxref=GenBank:WP_043136005.1;Name=WP_043136005.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006323540.1;locus_tag=IY40_RS02400;product=MFS transporter;protein_id=WP_043136005.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 175385 175972 . - . ID=gene-IY40_RS02405;Name=mog;gbkey=Gene;gene=mog;gene_biotype=protein_coding;locus_tag=IY40_RS02405;old_locus_tag=IY40_02440 NZ_JPQY01000003.1 Protein Homology CDS 175385 175972 . - 0 ID=cds-WP_015376607.1;Parent=gene-IY40_RS02405;Dbxref=GenBank:WP_015376607.1;Name=WP_015376607.1;Ontology_term=GO:0006777;gbkey=CDS;gene=mog;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017891557.1;locus_tag=IY40_RS02405;product=molybdopterin adenylyltransferase;protein_id=WP_015376607.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 176124 177077 . - . ID=gene-IY40_RS02410;Name=tal;gbkey=Gene;gene=tal;gene_biotype=protein_coding;locus_tag=IY40_RS02410;old_locus_tag=IY40_02445 NZ_JPQY01000003.1 Protein Homology CDS 176124 177077 . - 0 ID=cds-WP_004932982.1;Parent=gene-IY40_RS02410;Dbxref=GenBank:WP_004932982.1;Name=WP_004932982.1;Ontology_term=GO:0006098,GO:0004801,GO:0005737;gbkey=CDS;gene=tal;go_component=cytoplasm|0005737||IEA;go_function=transaldolase activity|0004801||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308035.1;locus_tag=IY40_RS02410;product=transaldolase;protein_id=WP_004932982.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 177461 178897 . + . ID=gene-IY40_RS02415;Name=IY40_RS02415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS02415;old_locus_tag=IY40_02450 NZ_JPQY01000003.1 Protein Homology CDS 177461 178897 . + 0 ID=cds-WP_025301518.1;Parent=gene-IY40_RS02415;Dbxref=GenBank:WP_025301518.1;Name=WP_025301518.1;Ontology_term=GO:0006814,GO:0006865,GO:0005283,GO:0015293,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid:sodium symporter activity|0005283||IEA,symporter activity|0015293||IEA;go_process=sodium ion transport|0006814||IEA,amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004932985.1;locus_tag=IY40_RS02415;product=alanine/glycine:cation symporter family protein;protein_id=WP_025301518.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 179004 179780 . + . ID=gene-IY40_RS02420;Name=yaaA;gbkey=Gene;gene=yaaA;gene_biotype=protein_coding;locus_tag=IY40_RS02420;old_locus_tag=IY40_02455 NZ_JPQY01000003.1 Protein Homology CDS 179004 179780 . + 0 ID=cds-WP_043136008.1;Parent=gene-IY40_RS02420;Dbxref=GenBank:WP_043136008.1;Name=WP_043136008.1;gbkey=CDS;gene=yaaA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004932988.1;locus_tag=IY40_RS02420;product=peroxide stress protein YaaA;protein_id=WP_043136008.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 179827 181116 . - . ID=gene-IY40_RS02425;Name=thrC;gbkey=Gene;gene=thrC;gene_biotype=protein_coding;locus_tag=IY40_RS02425;old_locus_tag=IY40_02460 NZ_JPQY01000003.1 Protein Homology CDS 179827 181116 . - 0 ID=cds-WP_043136010.1;Parent=gene-IY40_RS02425;Dbxref=GenBank:WP_043136010.1;Name=WP_043136010.1;Ontology_term=GO:0009088,GO:0004795;gbkey=CDS;gene=thrC;go_function=threonine synthase activity|0004795||IEA;go_process=threonine biosynthetic process|0009088||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006320064.1;locus_tag=IY40_RS02425;product=threonine synthase;protein_id=WP_043136010.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 181120 182049 . - . ID=gene-IY40_RS02430;Name=thrB;gbkey=Gene;gene=thrB;gene_biotype=protein_coding;locus_tag=IY40_RS02430;old_locus_tag=IY40_02465 NZ_JPQY01000003.1 Protein Homology CDS 181120 182049 . - 0 ID=cds-WP_043136013.1;Parent=gene-IY40_RS02430;Dbxref=GenBank:WP_043136013.1;Name=WP_043136013.1;Ontology_term=GO:0009088,GO:0004413,GO:0005524;gbkey=CDS;gene=thrB;go_function=homoserine kinase activity|0004413||IEA,ATP binding|0005524||IEA;go_process=threonine biosynthetic process|0009088||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004715920.1;locus_tag=IY40_RS02430;product=homoserine kinase;protein_id=WP_043136013.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 182051 184510 . - . ID=gene-IY40_RS02435;Name=thrA;gbkey=Gene;gene=thrA;gene_biotype=protein_coding;locus_tag=IY40_RS02435;old_locus_tag=IY40_02470 NZ_JPQY01000003.1 Protein Homology CDS 182051 184510 . - 0 ID=cds-WP_043136016.1;Parent=gene-IY40_RS02435;Dbxref=GenBank:WP_043136016.1;Name=WP_043136016.1;Ontology_term=GO:0008652,GO:0009067,GO:0004072,GO:0004412,GO:0050661;gbkey=CDS;gene=thrA;go_function=aspartate kinase activity|0004072||IEA,homoserine dehydrogenase activity|0004412||IEA,NADP binding|0050661||IEA;go_process=amino acid biosynthetic process|0008652||IEA,aspartate family amino acid biosynthetic process|0009067||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_033641811.1;locus_tag=IY40_RS02435;product=bifunctional aspartate kinase/homoserine dehydrogenase I;protein_id=WP_043136016.1;transl_table=11 NZ_JPQY01000003.1 cmsearch sequence_feature 184535 184652 . - . ID=id-NZ_JPQY01000003.1:184535..184652;Dbxref=RFAM:RF00506;Note=Thr leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.5 NZ_JPQY01000003.1 RefSeq gene 184591 184677 . - . ID=gene-IY40_RS25000;Name=thrL;gbkey=Gene;gene=thrL;gene_biotype=protein_coding;locus_tag=IY40_RS25000 NZ_JPQY01000003.1 Protein Homology CDS 184591 184677 . - 0 ID=cds-WP_071525951.1;Parent=gene-IY40_RS25000;Dbxref=GenBank:WP_071525951.1;Name=WP_071525951.1;Ontology_term=GO:0009088,GO:0031554,GO:0031556;gbkey=CDS;gene=thrL;go_process=threonine biosynthetic process|0009088||IEA,regulation of termination of DNA-templated transcription|0031554||IEA,transcriptional attenuation by ribosome|0031556||IEA;inference=COORDINATES: protein motif:HMM:TIGR02077.1;locus_tag=IY40_RS25000;product=thr operon leader peptide;protein_id=WP_071525951.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 184872 185558 . - . ID=gene-IY40_RS02440;Name=IY40_RS02440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS02440;old_locus_tag=IY40_02475 NZ_JPQY01000003.1 Protein Homology CDS 184872 185558 . - 0 ID=cds-WP_043136020.1;Parent=gene-IY40_RS02440;Dbxref=GenBank:WP_043136020.1;Name=WP_043136020.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012005134.1;locus_tag=IY40_RS02440;product=tRNA/rRNA methyltransferase;protein_id=WP_043136020.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 186188 186904 . + . ID=gene-IY40_RS02445;Name=arcA;gbkey=Gene;gene=arcA;gene_biotype=protein_coding;locus_tag=IY40_RS02445;old_locus_tag=IY40_02480 NZ_JPQY01000003.1 Protein Homology CDS 186188 186904 . + 0 ID=cds-WP_025305229.1;Parent=gene-IY40_RS02445;Dbxref=GenBank:WP_025305229.1;Name=WP_025305229.1;gbkey=CDS;gene=arcA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225009.1;locus_tag=IY40_RS02445;product=two-component system response regulator ArcA;protein_id=WP_025305229.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 186957 187436 . - . ID=gene-IY40_RS02450;Name=creA;gbkey=Gene;gene=creA;gene_biotype=protein_coding;locus_tag=IY40_RS02450;old_locus_tag=IY40_02485 NZ_JPQY01000003.1 Protein Homology CDS 186957 187436 . - 0 ID=cds-WP_004933005.1;Parent=gene-IY40_RS02450;Dbxref=GenBank:WP_004933005.1;Name=WP_004933005.1;gbkey=CDS;gene=creA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006320058.1;locus_tag=IY40_RS02450;product=protein CreA;protein_id=WP_004933005.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 187779 188648 . + . ID=gene-IY40_RS02455;Name=robA;gbkey=Gene;gene=robA;gene_biotype=protein_coding;locus_tag=IY40_RS02455;old_locus_tag=IY40_02490 NZ_JPQY01000003.1 Protein Homology CDS 187779 188648 . + 0 ID=cds-WP_025305228.1;Parent=gene-IY40_RS02455;Dbxref=GenBank:WP_025305228.1;Name=WP_025305228.1;gbkey=CDS;gene=robA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019080567.1;locus_tag=IY40_RS02455;product=MDR efflux pump AcrAB transcriptional activator RobA;protein_id=WP_025305228.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 188645 189292 . - . ID=gene-IY40_RS02460;Name=gpmB;gbkey=Gene;gene=gpmB;gene_biotype=protein_coding;locus_tag=IY40_RS02460;old_locus_tag=IY40_02495 NZ_JPQY01000003.1 Protein Homology CDS 188645 189292 . - 0 ID=cds-WP_025305227.1;Parent=gene-IY40_RS02460;Dbxref=GenBank:WP_025305227.1;Name=WP_025305227.1;Ontology_term=GO:0006096,GO:0004619;gbkey=CDS;gene=gpmB;go_function=phosphoglycerate mutase activity|0004619||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225003.1;locus_tag=IY40_RS02460;product=2%2C3-diphosphoglycerate-dependent phosphoglycerate mutase GpmB;protein_id=WP_025305227.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 189394 189912 . + . ID=gene-IY40_RS02465;Name=yjjX;gbkey=Gene;gene=yjjX;gene_biotype=protein_coding;locus_tag=IY40_RS02465;old_locus_tag=IY40_02500 NZ_JPQY01000003.1 Protein Homology CDS 189394 189912 . + 0 ID=cds-WP_004933015.1;Parent=gene-IY40_RS02465;Dbxref=GenBank:WP_004933015.1;Name=WP_004933015.1;gbkey=CDS;gene=yjjX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004933015.1;locus_tag=IY40_RS02465;product=inosine/xanthosine triphosphatase;protein_id=WP_004933015.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 189924 190253 . - . ID=gene-IY40_RS02470;Name=trpR;gbkey=Gene;gene=trpR;gene_biotype=protein_coding;locus_tag=IY40_RS02470;old_locus_tag=IY40_02505 NZ_JPQY01000003.1 Protein Homology CDS 189924 190253 . - 0 ID=cds-WP_016929152.1;Parent=gene-IY40_RS02470;Dbxref=GenBank:WP_016929152.1;Name=WP_016929152.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;gene=trpR;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004933017.1;locus_tag=IY40_RS02470;product=trp operon repressor;protein_id=WP_016929152.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 190308 192236 . - . ID=gene-IY40_RS02475;Name=sltY;gbkey=Gene;gene=sltY;gene_biotype=protein_coding;locus_tag=IY40_RS02475;old_locus_tag=IY40_02510 NZ_JPQY01000003.1 Protein Homology CDS 190308 192236 . - 0 ID=cds-WP_038630194.1;Parent=gene-IY40_RS02475;Dbxref=GenBank:WP_038630194.1;Name=WP_038630194.1;Ontology_term=GO:0000270,GO:0004553,GO:0008933,GO:0016020,GO:0042597;gbkey=CDS;gene=sltY;go_component=membrane|0016020||IEA,periplasmic space|0042597||IEA;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA,peptidoglycan lytic transglycosylase activity|0008933||IEA;go_process=peptidoglycan metabolic process|0000270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019455006.1;locus_tag=IY40_RS02475;product=murein transglycosylase;protein_id=WP_038630194.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 192870 193481 . + . ID=gene-IY40_RS02480;Name=IY40_RS02480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS02480;old_locus_tag=IY40_02515 NZ_JPQY01000003.1 Protein Homology CDS 192870 193481 . + 0 ID=cds-WP_025305224.1;Parent=gene-IY40_RS02480;Dbxref=GenBank:WP_025305224.1;Name=WP_025305224.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006323520.1;locus_tag=IY40_RS02480;product=YfiR family protein;protein_id=WP_025305224.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 193478 194725 . + . ID=gene-IY40_RS02485;Name=IY40_RS02485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS02485;old_locus_tag=IY40_02520 NZ_JPQY01000003.1 Protein Homology CDS 193478 194725 . + 0 ID=cds-WP_025305223.1;Parent=gene-IY40_RS02485;Dbxref=GenBank:WP_025305223.1;Name=WP_025305223.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019455004.1;locus_tag=IY40_RS02485;product=diguanylate cyclase domain-containing protein;protein_id=WP_025305223.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 194764 195261 . + . ID=gene-IY40_RS02490;Name=IY40_RS02490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS02490;old_locus_tag=IY40_02525 NZ_JPQY01000003.1 Protein Homology CDS 194764 195261 . + 0 ID=cds-WP_016929155.1;Parent=gene-IY40_RS02490;Dbxref=GenBank:WP_016929155.1;Name=WP_016929155.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019455003.1;locus_tag=IY40_RS02490;product=OmpA family protein;protein_id=WP_016929155.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 195404 197071 . + . ID=gene-IY40_RS02495;Name=ettA;gbkey=Gene;gene=ettA;gene_biotype=protein_coding;locus_tag=IY40_RS02495;old_locus_tag=IY40_02530 NZ_JPQY01000003.1 Protein Homology CDS 195404 197071 . + 0 ID=cds-WP_025159620.1;Parent=gene-IY40_RS02495;Dbxref=GenBank:WP_025159620.1;Name=WP_025159620.1;Ontology_term=GO:0045900,GO:0005524;gbkey=CDS;gene=ettA;go_function=ATP binding|0005524||IEA;go_process=negative regulation of translational elongation|0045900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313376.1;locus_tag=IY40_RS02495;product=energy-dependent translational throttle protein EttA;protein_id=WP_025159620.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 197103 198014 . - . ID=gene-IY40_RS02500;Name=IY40_RS02500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS02500;old_locus_tag=IY40_02535 NZ_JPQY01000003.1 Protein Homology CDS 197103 198014 . - 0 ID=cds-WP_025305222.1;Parent=gene-IY40_RS02500;Dbxref=GenBank:WP_025305222.1;Name=WP_025305222.1;Ontology_term=GO:0006355,GO:0001216,GO:0032993;gbkey=CDS;go_component=protein-DNA complex|0032993||IEA;go_function=DNA-binding transcription activator activity|0001216||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015376599.1;locus_tag=IY40_RS02500;product=LysR family transcriptional regulator;protein_id=WP_025305222.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 198112 199113 . + . ID=gene-IY40_RS02505;Name=IY40_RS02505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS02505;old_locus_tag=IY40_02540 NZ_JPQY01000003.1 Protein Homology CDS 198112 199113 . + 0 ID=cds-WP_043136037.1;Parent=gene-IY40_RS02505;Dbxref=GenBank:WP_043136037.1;Name=WP_043136037.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011815524.1;locus_tag=IY40_RS02505;product=zinc-binding alcohol dehydrogenase family protein;protein_id=WP_043136037.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 199145 200578 . - . ID=gene-IY40_RS02510;Name=IY40_RS02510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS02510;old_locus_tag=IY40_02545 NZ_JPQY01000003.1 Protein Homology CDS 199145 200578 . - 0 ID=cds-WP_043136041.1;Parent=gene-IY40_RS02510;Dbxref=GenBank:WP_043136041.1;Name=WP_043136041.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004933042.1;locus_tag=IY40_RS02510;product=glycosyltransferase family 39 protein;protein_id=WP_043136041.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 200713 201987 . - . ID=gene-IY40_RS02515;Name=nadR;gbkey=Gene;gene=nadR;gene_biotype=protein_coding;locus_tag=IY40_RS02515;old_locus_tag=IY40_02550 NZ_JPQY01000003.1 Protein Homology CDS 200713 201987 . - 0 ID=cds-WP_025305219.1;Parent=gene-IY40_RS02515;Dbxref=GenBank:WP_025305219.1;Name=WP_025305219.1;Ontology_term=GO:0009058,GO:0000309,GO:0003677,GO:0050262;gbkey=CDS;gene=nadR;go_function=nicotinamide-nucleotide adenylyltransferase activity|0000309||IEA,DNA binding|0003677||IEA,ribosylnicotinamide kinase activity|0050262||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016929160.1;locus_tag=IY40_RS02515;product=multifunctional transcriptional regulator/nicotinamide-nucleotide adenylyltransferase/ribosylnicotinamide kinase NadR;protein_id=WP_025305219.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 202046 203431 . - . ID=gene-IY40_RS02520;Name=radA;gbkey=Gene;gene=radA;gene_biotype=protein_coding;locus_tag=IY40_RS02520;old_locus_tag=IY40_02555 NZ_JPQY01000003.1 Protein Homology CDS 202046 203431 . - 0 ID=cds-WP_025159617.1;Parent=gene-IY40_RS02520;Dbxref=GenBank:WP_025159617.1;Name=WP_025159617.1;Ontology_term=GO:0006281,GO:0003684,GO:0005524;gbkey=CDS;gene=radA;go_function=damaged DNA binding|0003684||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012005120.1;locus_tag=IY40_RS02520;product=DNA repair protein RadA;protein_id=WP_025159617.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 203451 204428 . - . ID=gene-IY40_RS02525;Name=serB;gbkey=Gene;gene=serB;gene_biotype=protein_coding;locus_tag=IY40_RS02525;old_locus_tag=IY40_02560 NZ_JPQY01000003.1 Protein Homology CDS 203451 204428 . - 0 ID=cds-WP_025305218.1;Parent=gene-IY40_RS02525;Dbxref=GenBank:WP_025305218.1;Name=WP_025305218.1;Ontology_term=GO:0006564,GO:0036424;gbkey=CDS;gene=serB;go_function=L-phosphoserine phosphatase activity|0036424||IEA;go_process=L-serine biosynthetic process|0006564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012005119.1;locus_tag=IY40_RS02525;product=phosphoserine phosphatase;protein_id=WP_025305218.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 204539 205222 . + . ID=gene-IY40_RS02530;Name=IY40_RS02530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS02530;old_locus_tag=IY40_02565 NZ_JPQY01000003.1 Protein Homology CDS 204539 205222 . + 0 ID=cds-WP_025305217.1;Parent=gene-IY40_RS02530;Dbxref=GenBank:WP_025305217.1;Name=WP_025305217.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019454993.1;locus_tag=IY40_RS02530;product=YtjB family periplasmic protein;protein_id=WP_025305217.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 205392 206123 . - . ID=gene-IY40_RS02535;Name=deoD;gbkey=Gene;gene=deoD;gene_biotype=protein_coding;locus_tag=IY40_RS02535;old_locus_tag=IY40_02570 NZ_JPQY01000003.1 Protein Homology CDS 205392 206123 . - 0 ID=cds-WP_004933059.1;Parent=gene-IY40_RS02535;Dbxref=GenBank:WP_004933059.1;Name=WP_004933059.1;Ontology_term=GO:0006139,GO:0004731;gbkey=CDS;gene=deoD;go_function=purine-nucleoside phosphorylase activity|0004731||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004170775.1;locus_tag=IY40_RS02535;product=purine-nucleoside phosphorylase;protein_id=WP_004933059.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 206290 207513 . - . ID=gene-IY40_RS02540;Name=deoB;gbkey=Gene;gene=deoB;gene_biotype=protein_coding;locus_tag=IY40_RS02540;old_locus_tag=IY40_02575 NZ_JPQY01000003.1 Protein Homology CDS 206290 207513 . - 0 ID=cds-WP_043136044.1;Parent=gene-IY40_RS02540;Dbxref=GenBank:WP_043136044.1;Name=WP_043136044.1;Ontology_term=GO:0009117,GO:0043094,GO:0000287,GO:0008973,GO:0005737;gbkey=CDS;gene=deoB;go_component=cytoplasm|0005737||IEA;go_function=magnesium ion binding|0000287||IEA,phosphopentomutase activity|0008973||IEA;go_process=nucleotide metabolic process|0009117||IEA,metabolic compound salvage|0043094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012005115.1;locus_tag=IY40_RS02540;product=phosphopentomutase;protein_id=WP_043136044.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 207584 208906 . - . ID=gene-IY40_RS02545;Name=deoA;gbkey=Gene;gene=deoA;gene_biotype=protein_coding;locus_tag=IY40_RS02545;old_locus_tag=IY40_02580 NZ_JPQY01000003.1 Protein Homology CDS 207584 208906 . - 0 ID=cds-WP_043136047.1;Parent=gene-IY40_RS02545;Dbxref=GenBank:WP_043136047.1;Name=WP_043136047.1;Ontology_term=GO:0006213,GO:0009032;gbkey=CDS;gene=deoA;go_function=thymidine phosphorylase activity|0009032||IEA;go_process=pyrimidine nucleoside metabolic process|0006213||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019454991.1;locus_tag=IY40_RS02545;product=thymidine phosphorylase;protein_id=WP_043136047.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 208973 209758 . - . ID=gene-IY40_RS02550;Name=deoC;gbkey=Gene;gene=deoC;gene_biotype=protein_coding;locus_tag=IY40_RS02550;old_locus_tag=IY40_02585 NZ_JPQY01000003.1 Protein Homology CDS 208973 209758 . - 0 ID=cds-WP_043136051.1;Parent=gene-IY40_RS02550;Dbxref=GenBank:WP_043136051.1;Name=WP_043136051.1;Ontology_term=GO:0009264,GO:0004139,GO:0005737;gbkey=CDS;gene=deoC;go_component=cytoplasm|0005737||IEA;go_function=deoxyribose-phosphate aldolase activity|0004139||IEA;go_process=deoxyribonucleotide catabolic process|0009264||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006320020.1;locus_tag=IY40_RS02550;product=deoxyribose-phosphate aldolase;protein_id=WP_043136051.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 210129 211406 . - . ID=gene-IY40_RS02555;Name=IY40_RS02555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS02555;old_locus_tag=IY40_02590 NZ_JPQY01000003.1 Protein Homology CDS 210129 211406 . - 0 ID=cds-WP_038630188.1;Parent=gene-IY40_RS02555;Dbxref=GenBank:WP_038630188.1;Name=WP_038630188.1;Ontology_term=GO:1901642,GO:0005337,GO:0015293,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=nucleoside transmembrane transporter activity|0005337||IEA,symporter activity|0015293||IEA;go_process=nucleoside transmembrane transport|1901642||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012005112.1;locus_tag=IY40_RS02555;product=NupC/NupG family nucleoside CNT transporter;protein_id=WP_038630188.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 211590 212372 . - . ID=gene-IY40_RS02560;Name=IY40_RS02560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS02560;old_locus_tag=IY40_02595 NZ_JPQY01000003.1 Protein Homology CDS 211590 212372 . - 0 ID=cds-WP_043136054.1;Parent=gene-IY40_RS02560;Dbxref=GenBank:WP_043136054.1;Name=WP_043136054.1;Ontology_term=GO:0016788;gbkey=CDS;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004933080.1;locus_tag=IY40_RS02560;product=TatD family hydrolase;protein_id=WP_043136054.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 212369 213487 . - . ID=gene-IY40_RS02565;Name=IY40_RS02565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS02565;old_locus_tag=IY40_02600 NZ_JPQY01000003.1 Protein Homology CDS 212369 213487 . - 0 ID=cds-WP_025305211.1;Parent=gene-IY40_RS02565;Dbxref=GenBank:WP_025305211.1;Name=WP_025305211.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006323494.1;locus_tag=IY40_RS02565;product=patatin-like phospholipase family protein;protein_id=WP_025305211.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 213498 213683 . - . ID=gene-IY40_RS02570;Name=IY40_RS02570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS02570;old_locus_tag=IY40_02605 NZ_JPQY01000003.1 Protein Homology CDS 213498 213683 . - 0 ID=cds-WP_025305210.1;Parent=gene-IY40_RS02570;Dbxref=GenBank:WP_025305210.1;Name=WP_025305210.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013811420.1;locus_tag=IY40_RS02570;product=CsbD family protein;protein_id=WP_025305210.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 213752 213913 . - . ID=gene-IY40_RS25005;Name=IY40_RS25005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS25005 NZ_JPQY01000003.1 Protein Homology CDS 213752 213913 . - 0 ID=cds-WP_004857650.1;Parent=gene-IY40_RS25005;Dbxref=GenBank:WP_004857650.1;Name=WP_004857650.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002887716.1;locus_tag=IY40_RS25005;product=DUF1328 domain-containing protein;protein_id=WP_004857650.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 214075 214689 . - . ID=gene-IY40_RS02575;Name=osmY;gbkey=Gene;gene=osmY;gene_biotype=protein_coding;locus_tag=IY40_RS02575;old_locus_tag=IY40_02615 NZ_JPQY01000003.1 Protein Homology CDS 214075 214689 . - 0 ID=cds-WP_025305209.1;Parent=gene-IY40_RS02575;Dbxref=GenBank:WP_025305209.1;Name=WP_025305209.1;gbkey=CDS;gene=osmY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004846732.1;locus_tag=IY40_RS02575;product=molecular chaperone OsmY;protein_id=WP_025305209.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 215207 216796 . - . ID=gene-IY40_RS02580;Name=prfC;gbkey=Gene;gene=prfC;gene_biotype=protein_coding;locus_tag=IY40_RS02580;old_locus_tag=IY40_02620 NZ_JPQY01000003.1 Protein Homology CDS 215207 216796 . - 0 ID=cds-WP_025305208.1;Parent=gene-IY40_RS02580;Dbxref=GenBank:WP_025305208.1;Name=WP_025305208.1;Ontology_term=GO:0006415,GO:0003747,GO:0003924,GO:0005525;gbkey=CDS;gene=prfC;go_function=translation release factor activity|0003747||IEA,GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019080589.1;locus_tag=IY40_RS02580;product=peptide chain release factor 3;protein_id=WP_025305208.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 216943 218208 . - . ID=gene-IY40_RS02585;Name=IY40_RS02585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS02585;old_locus_tag=IY40_02625 NZ_JPQY01000003.1 Protein Homology CDS 216943 218208 . - 0 ID=cds-WP_043136059.1;Parent=gene-IY40_RS02585;Dbxref=GenBank:WP_043136059.1;Name=WP_043136059.1;Ontology_term=GO:0016310,GO:0004674,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=protein serine/threonine kinase activity|0004674||IEA;go_process=phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006323492.1;locus_tag=IY40_RS02585;product=type II toxin-antitoxin system HipA family toxin;protein_id=WP_043136059.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 218212 218517 . - . ID=gene-IY40_RS02590;Name=IY40_RS02590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS02590;old_locus_tag=IY40_02630 NZ_JPQY01000003.1 Protein Homology CDS 218212 218517 . - 0 ID=cds-WP_043136062.1;Parent=gene-IY40_RS02590;Dbxref=GenBank:WP_043136062.1;Name=WP_043136062.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006320004.1;locus_tag=IY40_RS02590;product=helix-turn-helix domain-containing protein;protein_id=WP_043136062.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 218672 219115 . - . ID=gene-IY40_RS02595;Name=rimI;gbkey=Gene;gene=rimI;gene_biotype=protein_coding;locus_tag=IY40_RS02595;old_locus_tag=IY40_02635 NZ_JPQY01000003.1 Protein Homology CDS 218672 219115 . - 0 ID=cds-WP_043136064.1;Parent=gene-IY40_RS02595;Dbxref=GenBank:WP_043136064.1;Name=WP_043136064.1;Ontology_term=GO:0006474,GO:0008080;gbkey=CDS;gene=rimI;go_function=N-acetyltransferase activity|0008080||IEA;go_process=N-terminal protein amino acid acetylation|0006474||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003856565.1;locus_tag=IY40_RS02595;product=ribosomal protein S18-alanine N-acetyltransferase;protein_id=WP_043136064.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 219060 219497 . - . ID=gene-IY40_RS02600;Name=IY40_RS02600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS02600;old_locus_tag=IY40_02640 NZ_JPQY01000003.1 Protein Homology CDS 219060 219497 . - 0 ID=cds-WP_043136067.1;Parent=gene-IY40_RS02600;Dbxref=GenBank:WP_043136067.1;Name=WP_043136067.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019454981.1;locus_tag=IY40_RS02600;product=DNA polymerase III subunit psi;protein_id=WP_043136067.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 219644 220684 . + . ID=gene-IY40_RS02605;Name=rsmC;gbkey=Gene;gene=rsmC;gene_biotype=protein_coding;locus_tag=IY40_RS02605;old_locus_tag=IY40_02645 NZ_JPQY01000003.1 Protein Homology CDS 219644 220684 . + 0 ID=cds-WP_025305205.1;Parent=gene-IY40_RS02605;Dbxref=GenBank:WP_025305205.1;Name=WP_025305205.1;Ontology_term=GO:0006364,GO:0003676,GO:0008990;gbkey=CDS;gene=rsmC;go_function=nucleic acid binding|0003676||IEA,rRNA (guanine-N2-)-methyltransferase activity|0008990||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015376586.1;locus_tag=IY40_RS02605;product=16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC;protein_id=WP_025305205.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 220734 221726 . - . ID=gene-IY40_RS02610;Name=IY40_RS02610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS02610;old_locus_tag=IY40_02650 NZ_JPQY01000003.1 Protein Homology CDS 220734 221726 . - 0 ID=cds-WP_025305204.1;Parent=gene-IY40_RS02610;Dbxref=GenBank:WP_025305204.1;Name=WP_025305204.1;Ontology_term=GO:0016616;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013811415.1;locus_tag=IY40_RS02610;product=aldo/keto reductase;protein_id=WP_025305204.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 221845 222789 . + . ID=gene-IY40_RS02615;Name=IY40_RS02615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS02615;old_locus_tag=IY40_02655 NZ_JPQY01000003.1 Protein Homology CDS 221845 222789 . + 0 ID=cds-WP_043136071.1;Parent=gene-IY40_RS02615;Dbxref=GenBank:WP_043136071.1;Name=WP_043136071.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006323485.1;locus_tag=IY40_RS02615;product=LysR family transcriptional regulator;protein_id=WP_043136071.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 222862 222948 . + . ID=gene-IY40_RS02620;Name=IY40_RS02620;gbkey=Gene;gene_biotype=tRNA;locus_tag=IY40_RS02620;old_locus_tag=IY40_02660 NZ_JPQY01000003.1 tRNAscan-SE tRNA 222862 222948 . + . ID=rna-IY40_RS02620;Parent=gene-IY40_RS02620;anticodon=(pos:222896..222898);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=IY40_RS02620;product=tRNA-Leu NZ_JPQY01000003.1 tRNAscan-SE exon 222862 222948 . + . ID=exon-IY40_RS02620-1;Parent=rna-IY40_RS02620;anticodon=(pos:222896..222898);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=IY40_RS02620;product=tRNA-Leu NZ_JPQY01000003.1 RefSeq gene 222985 223071 . + . ID=gene-IY40_RS02625;Name=IY40_RS02625;gbkey=Gene;gene_biotype=tRNA;locus_tag=IY40_RS02625;old_locus_tag=IY40_02665 NZ_JPQY01000003.1 tRNAscan-SE tRNA 222985 223071 . + . ID=rna-IY40_RS02625;Parent=gene-IY40_RS02625;anticodon=(pos:223019..223021);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=IY40_RS02625;product=tRNA-Leu NZ_JPQY01000003.1 tRNAscan-SE exon 222985 223071 . + . ID=exon-IY40_RS02625-1;Parent=rna-IY40_RS02625;anticodon=(pos:223019..223021);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=IY40_RS02625;product=tRNA-Leu NZ_JPQY01000003.1 RefSeq gene 223114 223200 . + . ID=gene-IY40_RS02630;Name=IY40_RS02630;gbkey=Gene;gene_biotype=tRNA;locus_tag=IY40_RS02630;old_locus_tag=IY40_02670 NZ_JPQY01000003.1 tRNAscan-SE tRNA 223114 223200 . + . ID=rna-IY40_RS02630;Parent=gene-IY40_RS02630;anticodon=(pos:223148..223150);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=IY40_RS02630;product=tRNA-Leu NZ_JPQY01000003.1 tRNAscan-SE exon 223114 223200 . + . ID=exon-IY40_RS02630-1;Parent=rna-IY40_RS02630;anticodon=(pos:223148..223150);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=IY40_RS02630;product=tRNA-Leu NZ_JPQY01000003.1 RefSeq gene 223290 223574 . - . ID=gene-IY40_RS02635;Name=IY40_RS02635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS02635;old_locus_tag=IY40_02675 NZ_JPQY01000003.1 Protein Homology CDS 223290 223574 . - 0 ID=cds-WP_004933115.1;Parent=gene-IY40_RS02635;Dbxref=GenBank:WP_004933115.1;Name=WP_004933115.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013811413.1;locus_tag=IY40_RS02635;product=DUF1435 domain-containing protein;protein_id=WP_004933115.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 223834 224913 . + . ID=gene-IY40_RS02640;Name=IY40_RS02640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS02640;old_locus_tag=IY40_02680 NZ_JPQY01000003.1 Protein Homology CDS 223834 224913 . + 0 ID=cds-WP_025305202.1;Parent=gene-IY40_RS02640;Dbxref=GenBank:WP_025305202.1;Name=WP_025305202.1;Ontology_term=GO:0007165,GO:0005525,GO:0046872,GO:0052621,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=GTP binding|0005525||IEA,metal ion binding|0046872||IEA,diguanylate cyclase activity|0052621||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015376552.1;locus_tag=IY40_RS02640;product=GGDEF domain-containing protein;protein_id=WP_025305202.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 224959 225555 . - . ID=gene-IY40_RS02645;Name=IY40_RS02645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS02645;old_locus_tag=IY40_02685 NZ_JPQY01000003.1 Protein Homology CDS 224959 225555 . - 0 ID=cds-WP_043136074.1;Parent=gene-IY40_RS02645;Dbxref=GenBank:WP_043136074.1;Name=WP_043136074.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016929176.1;locus_tag=IY40_RS02645;product=TetR/AcrR family transcriptional regulator;protein_id=WP_043136074.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 225692 226888 . + . ID=gene-IY40_RS02650;Name=IY40_RS02650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS02650;old_locus_tag=IY40_02690 NZ_JPQY01000003.1 Protein Homology CDS 225692 226888 . + 0 ID=cds-WP_043136077.1;Parent=gene-IY40_RS02650;Dbxref=GenBank:WP_043136077.1;Name=WP_043136077.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015376550.1;locus_tag=IY40_RS02650;product=MFS transporter;protein_id=WP_043136077.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 226899 227810 . - . ID=gene-IY40_RS02655;Name=IY40_RS02655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS02655;old_locus_tag=IY40_02695 NZ_JPQY01000003.1 Protein Homology CDS 226899 227810 . - 0 ID=cds-WP_025305199.1;Parent=gene-IY40_RS02655;Dbxref=GenBank:WP_025305199.1;Name=WP_025305199.1;Ontology_term=GO:0006355,GO:0001216,GO:0032993;gbkey=CDS;go_component=protein-DNA complex|0032993||IEA;go_function=DNA-binding transcription activator activity|0001216||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016929178.1;locus_tag=IY40_RS02655;product=LysR family transcriptional regulator;protein_id=WP_025305199.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 227919 229121 . + . ID=gene-IY40_RS02660;Name=IY40_RS02660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS02660;old_locus_tag=IY40_02700 NZ_JPQY01000003.1 Protein Homology CDS 227919 229121 . + 0 ID=cds-WP_043136085.1;Parent=gene-IY40_RS02660;Dbxref=GenBank:WP_043136085.1;Name=WP_043136085.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016929179.1;locus_tag=IY40_RS02660;product=MFS transporter;protein_id=WP_043136085.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 229123 230352 . - . ID=gene-IY40_RS02665;Name=fucP;gbkey=Gene;gene=fucP;gene_biotype=protein_coding;locus_tag=IY40_RS02665;old_locus_tag=IY40_02705 NZ_JPQY01000003.1 Protein Homology CDS 229123 230352 . - 0 ID=cds-WP_043136088.1;Parent=gene-IY40_RS02665;Dbxref=GenBank:WP_043136088.1;Name=WP_043136088.1;Ontology_term=GO:0015756,GO:0015150,GO:0015535;gbkey=CDS;gene=fucP;go_function=fucose transmembrane transporter activity|0015150||IEA,fucose:proton symporter activity|0015535||IEA;go_process=fucose transmembrane transport|0015756||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019454971.1;locus_tag=IY40_RS02665;product=L-fucose:H+ symporter permease;protein_id=WP_043136088.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 230393 230752 . - . ID=gene-IY40_RS02670;Name=IY40_RS02670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS02670;old_locus_tag=IY40_02710 NZ_JPQY01000003.1 Protein Homology CDS 230393 230752 . - 0 ID=cds-WP_043136092.1;Parent=gene-IY40_RS02670;Dbxref=GenBank:WP_043136092.1;Name=WP_043136092.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006320091.1;locus_tag=IY40_RS02670;product=L-rhamnose mutarotase;protein_id=WP_043136092.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 230749 231525 . - . ID=gene-IY40_RS02675;Name=IY40_RS02675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS02675;old_locus_tag=IY40_02715 NZ_JPQY01000003.1 Protein Homology CDS 230749 231525 . - 0 ID=cds-WP_043136096.1;Parent=gene-IY40_RS02675;Dbxref=GenBank:WP_043136096.1;Name=WP_043136096.1;Ontology_term=GO:0019317,GO:0000166,GO:0004316;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity|0004316||IEA;go_process=fucose catabolic process|0019317||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004933138.1;locus_tag=IY40_RS02675;product=L-fucose dehydrogenase;protein_id=WP_043136096.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 231503 232366 . - . ID=gene-IY40_RS02680;Name=IY40_RS02680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS02680;old_locus_tag=IY40_02720 NZ_JPQY01000003.1 Protein Homology CDS 231503 232366 . - 0 ID=cds-WP_043136099.1;Parent=gene-IY40_RS02680;Dbxref=GenBank:WP_043136099.1;Name=WP_043136099.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004933141.1;locus_tag=IY40_RS02680;product=amidohydrolase family protein;protein_id=WP_043136099.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 232381 233658 . - . ID=gene-IY40_RS02685;Name=IY40_RS02685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS02685;old_locus_tag=IY40_02725 NZ_JPQY01000003.1 Protein Homology CDS 232381 233658 . - 0 ID=cds-WP_025305193.1;Parent=gene-IY40_RS02685;Dbxref=GenBank:WP_025305193.1;Name=WP_025305193.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004949881.1;locus_tag=IY40_RS02685;product=L-fuconate dehydratase;protein_id=WP_025305193.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 233673 234518 . - . ID=gene-IY40_RS02690;Name=IY40_RS02690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS02690;old_locus_tag=IY40_02730 NZ_JPQY01000003.1 Protein Homology CDS 233673 234518 . - 0 ID=cds-WP_043136103.1;Parent=gene-IY40_RS02690;Dbxref=GenBank:WP_043136103.1;Name=WP_043136103.1;Ontology_term=GO:0003824,GO:0016787;gbkey=CDS;go_function=catalytic activity|0003824||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192131.1;locus_tag=IY40_RS02690;product=fumarylacetoacetate hydrolase family protein;protein_id=WP_043136103.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 234544 235284 . - . ID=gene-IY40_RS02695;Name=IY40_RS02695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS02695;old_locus_tag=IY40_02735 NZ_JPQY01000003.1 Protein Homology CDS 234544 235284 . - 0 ID=cds-WP_043136107.1;Parent=gene-IY40_RS02695;Dbxref=GenBank:WP_043136107.1;Name=WP_043136107.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002216393.1;locus_tag=IY40_RS02695;product=SDR family oxidoreductase;protein_id=WP_043136107.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 235521 236279 . + . ID=gene-IY40_RS02700;Name=IY40_RS02700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS02700;old_locus_tag=IY40_02740 NZ_JPQY01000003.1 Protein Homology CDS 235521 236279 . + 0 ID=cds-WP_025305190.1;Parent=gene-IY40_RS02700;Dbxref=GenBank:WP_025305190.1;Name=WP_025305190.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004949875.1;locus_tag=IY40_RS02700;product=FadR/GntR family transcriptional regulator;protein_id=WP_025305190.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 236406 237548 . + . ID=gene-IY40_RS02705;Name=ampH;gbkey=Gene;gene=ampH;gene_biotype=protein_coding;locus_tag=IY40_RS02705;old_locus_tag=IY40_02745 NZ_JPQY01000003.1 Protein Homology CDS 236406 237548 . + 0 ID=cds-WP_025305189.1;Parent=gene-IY40_RS02705;Dbxref=GenBank:WP_025305189.1;Name=WP_025305189.1;gbkey=CDS;gene=ampH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012005089.1;locus_tag=IY40_RS02705;product=D-alanyl-D-alanine-carboxypeptidase/endopeptidase AmpH;protein_id=WP_025305189.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 237582 238097 . - . ID=gene-IY40_RS02710;Name=hpaC;gbkey=Gene;gene=hpaC;gene_biotype=protein_coding;locus_tag=IY40_RS02710;old_locus_tag=IY40_02750 NZ_JPQY01000003.1 Protein Homology CDS 237582 238097 . - 0 ID=cds-WP_025305188.1;Parent=gene-IY40_RS02710;Dbxref=GenBank:WP_025305188.1;Name=WP_025305188.1;Ontology_term=GO:0042537,GO:0016651,GO:0051287;gbkey=CDS;gene=hpaC;go_function=oxidoreductase activity%2C acting on NAD(P)H|0016651||IEA,NAD binding|0051287||IEA;go_process=benzene-containing compound metabolic process|0042537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004933156.1;locus_tag=IY40_RS02710;product=4-hydroxyphenylacetate 3-monooxygenase%2C reductase component;protein_id=WP_025305188.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 238114 239676 . - . ID=gene-IY40_RS02715;Name=hpaB;gbkey=Gene;gene=hpaB;gene_biotype=protein_coding;locus_tag=IY40_RS02715;old_locus_tag=IY40_02755 NZ_JPQY01000003.1 Protein Homology CDS 238114 239676 . - 0 ID=cds-WP_043136111.1;Parent=gene-IY40_RS02715;Dbxref=GenBank:WP_043136111.1;Name=WP_043136111.1;Ontology_term=GO:0010124,GO:0016712,GO:0050660;gbkey=CDS;gene=hpaB;go_function=oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C reduced flavin or flavoprotein as one donor%2C and incorporation of one atom of oxygen|0016712||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=phenylacetate catabolic process|0010124||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000801462.1;locus_tag=IY40_RS02715;product=4-hydroxyphenylacetate 3-monooxygenase%2C oxygenase component;protein_id=WP_043136111.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 239855 240751 . - . ID=gene-IY40_RS02720;Name=hpaA;gbkey=Gene;gene=hpaA;gene_biotype=protein_coding;locus_tag=IY40_RS02720;old_locus_tag=IY40_02760 NZ_JPQY01000003.1 Protein Homology CDS 239855 240751 . - 0 ID=cds-WP_004933161.1;Parent=gene-IY40_RS02720;Dbxref=GenBank:WP_004933161.1;Name=WP_004933161.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;gene=hpaA;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013811398.1;locus_tag=IY40_RS02720;product=4-hydroxyphenylacetate catabolism regulatory protein HpaA;protein_id=WP_004933161.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 240786 242156 . - . ID=gene-IY40_RS02725;Name=hpaX;gbkey=Gene;gene=hpaX;gene_biotype=protein_coding;locus_tag=IY40_RS02725;old_locus_tag=IY40_02765 NZ_JPQY01000003.1 Protein Homology CDS 240786 242156 . - 0 ID=cds-WP_043136113.1;Parent=gene-IY40_RS02725;Dbxref=GenBank:WP_043136113.1;Name=WP_043136113.1;Ontology_term=GO:1900754,GO:1901241;gbkey=CDS;gene=hpaX;go_function=4-hydroxyphenylacetate transmembrane transporter activity|1901241||IEA;go_process=4-hydroxyphenylacetate transport|1900754||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460080.1;locus_tag=IY40_RS02725;product=4-hydroxyphenylacetate permease;protein_id=WP_043136113.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 242160 242954 . - . ID=gene-IY40_RS02730;Name=hpaI;gbkey=Gene;gene=hpaI;gene_biotype=protein_coding;locus_tag=IY40_RS02730;old_locus_tag=IY40_02770 NZ_JPQY01000003.1 Protein Homology CDS 242160 242954 . - 0 ID=cds-WP_033631724.1;Parent=gene-IY40_RS02730;Dbxref=GenBank:WP_033631724.1;Name=WP_033631724.1;Ontology_term=GO:0010124;gbkey=CDS;gene=hpaI;go_process=phenylacetate catabolic process|0010124||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004955633.1;locus_tag=IY40_RS02730;product=4-hydroxy-2-oxoheptanedioate aldolase;protein_id=WP_033631724.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 243031 243834 . - . ID=gene-IY40_RS02735;Name=hpaH;gbkey=Gene;gene=hpaH;gene_biotype=protein_coding;locus_tag=IY40_RS02735;old_locus_tag=IY40_02775 NZ_JPQY01000003.1 Protein Homology CDS 243031 243834 . - 0 ID=cds-WP_043136119.1;Parent=gene-IY40_RS02735;Dbxref=GenBank:WP_043136119.1;Name=WP_043136119.1;Ontology_term=GO:0009056,GO:0018817;gbkey=CDS;gene=hpaH;go_function=2-oxo-hept-3-ene-1%2C7-dioate hydratase activity|0018817||IEA;go_process=catabolic process|0009056||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012005083.1;locus_tag=IY40_RS02735;product=2-oxo-hept-4-ene-1%2C7-dioate hydratase;protein_id=WP_043136119.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 243849 244235 . - . ID=gene-IY40_RS02740;Name=IY40_RS02740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS02740;old_locus_tag=IY40_02780 NZ_JPQY01000003.1 Protein Homology CDS 243849 244235 . - 0 ID=cds-WP_004933172.1;Parent=gene-IY40_RS02740;Dbxref=GenBank:WP_004933172.1;Name=WP_004933172.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004933172.1;locus_tag=IY40_RS02740;product=5-carboxymethyl-2-hydroxymuconate Delta-isomerase;protein_id=WP_004933172.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 244286 245359 . - . ID=gene-IY40_RS02745;Name=hpaD;gbkey=Gene;gene=hpaD;gene_biotype=protein_coding;locus_tag=IY40_RS02745;old_locus_tag=IY40_02785 NZ_JPQY01000003.1 Protein Homology CDS 244286 245359 . - 0 ID=cds-WP_089180517.1;Parent=gene-IY40_RS02745;Dbxref=GenBank:WP_089180517.1;Name=WP_089180517.1;Ontology_term=GO:0008687;gbkey=CDS;gene=hpaD;go_function=3%2C4-dihydroxyphenylacetate 2%2C3-dioxygenase activity|0008687||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013811393.1;locus_tag=IY40_RS02745;product=3%2C4-dihydroxyphenylacetate 2%2C3-dioxygenase;protein_id=WP_089180517.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 245397 246851 . - . ID=gene-IY40_RS02750;Name=hpaE;gbkey=Gene;gene=hpaE;gene_biotype=protein_coding;locus_tag=IY40_RS02750;old_locus_tag=IY40_02790 NZ_JPQY01000003.1 Protein Homology CDS 245397 246851 . - 0 ID=cds-WP_043136128.1;Parent=gene-IY40_RS02750;Dbxref=GenBank:WP_043136128.1;Name=WP_043136128.1;Ontology_term=GO:1901023,GO:0018480;gbkey=CDS;gene=hpaE;go_function=5-carboxymethyl-2-hydroxymuconic-semialdehyde dehydrogenase activity|0018480||IEA;go_process=4-hydroxyphenylacetate catabolic process|1901023||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224933.1;locus_tag=IY40_RS02750;product=5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase;protein_id=WP_043136128.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 246848 247612 . - . ID=gene-IY40_RS02755;Name=IY40_RS02755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS02755;old_locus_tag=IY40_02795 NZ_JPQY01000003.1 Protein Homology CDS 246848 247612 . - 0 ID=cds-WP_043136132.1;Parent=gene-IY40_RS02755;Dbxref=GenBank:WP_043136132.1;Name=WP_043136132.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004933177.1;locus_tag=IY40_RS02755;product=fumarylacetoacetate hydrolase family protein;protein_id=WP_043136132.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 247609 248241 . - . ID=gene-IY40_RS02760;Name=IY40_RS02760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS02760;old_locus_tag=IY40_02800 NZ_JPQY01000003.1 Protein Homology CDS 247609 248241 . - 0 ID=cds-WP_043136135.1;Parent=gene-IY40_RS02760;Dbxref=GenBank:WP_043136135.1;Name=WP_043136135.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015376535.1;locus_tag=IY40_RS02760;product=fumarylacetoacetate hydrolase family protein;protein_id=WP_043136135.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 248568 249020 . + . ID=gene-IY40_RS02765;Name=hpaR;gbkey=Gene;gene=hpaR;gene_biotype=protein_coding;locus_tag=IY40_RS02765;old_locus_tag=IY40_02805 NZ_JPQY01000003.1 Protein Homology CDS 248568 249020 . + 0 ID=cds-WP_004933183.1;Parent=gene-IY40_RS02765;Dbxref=GenBank:WP_004933183.1;Name=WP_004933183.1;Ontology_term=GO:0045892,GO:0003677,GO:0003700;gbkey=CDS;gene=hpaR;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019454952.1;locus_tag=IY40_RS02765;product=homoprotocatechuate degradation operon regulator HpaR;protein_id=WP_004933183.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 249077 249868 . - . ID=gene-IY40_RS02770;Name=IY40_RS02770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS02770;old_locus_tag=IY40_02810 NZ_JPQY01000003.1 Protein Homology CDS 249077 249868 . - 0 ID=cds-WP_043136140.1;Parent=gene-IY40_RS02770;Dbxref=GenBank:WP_043136140.1;Name=WP_043136140.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013811388.1;locus_tag=IY40_RS02770;product=SDR family oxidoreductase;protein_id=WP_043136140.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 249873 250670 . - . ID=gene-IY40_RS02775;Name=IY40_RS02775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS02775;old_locus_tag=IY40_02815 NZ_JPQY01000003.1 Protein Homology CDS 249873 250670 . - 0 ID=cds-WP_043136144.1;Parent=gene-IY40_RS02775;Dbxref=GenBank:WP_043136144.1;Name=WP_043136144.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004949855.1;locus_tag=IY40_RS02775;product=MoaF C-terminal domain-containing protein;protein_id=WP_043136144.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 250682 251464 . - . ID=gene-IY40_RS02780;Name=IY40_RS02780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS02780;old_locus_tag=IY40_02820 NZ_JPQY01000003.1 Protein Homology CDS 250682 251464 . - 0 ID=cds-WP_043136148.1;Parent=gene-IY40_RS02780;Dbxref=GenBank:WP_043136148.1;Name=WP_043136148.1;Ontology_term=GO:0016491,GO:0070403;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006323456.1;locus_tag=IY40_RS02780;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_043136148.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 251457 252047 . - . ID=gene-IY40_RS02785;Name=IY40_RS02785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS02785;old_locus_tag=IY40_02825 NZ_JPQY01000003.1 Protein Homology CDS 251457 252047 . - 0 ID=cds-WP_043136151.1;Parent=gene-IY40_RS02785;Dbxref=GenBank:WP_043136151.1;Name=WP_043136151.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019454949.1;locus_tag=IY40_RS02785;product=DUF3156 family protein;protein_id=WP_043136151.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 252022 253515 . - . ID=gene-IY40_RS02790;Name=IY40_RS02790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS02790;old_locus_tag=IY40_02830 NZ_JPQY01000003.1 Protein Homology CDS 252022 253515 . - 0 ID=cds-WP_043136156.1;Parent=gene-IY40_RS02790;Dbxref=GenBank:WP_043136156.1;Name=WP_043136156.1;Ontology_term=GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006323453.1;locus_tag=IY40_RS02790;product=APC family permease;protein_id=WP_043136156.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 253645 254829 . - . ID=gene-IY40_RS02795;Name=IY40_RS02795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS02795;old_locus_tag=IY40_02835 NZ_JPQY01000003.1 Protein Homology CDS 253645 254829 . - 0 ID=cds-WP_043136159.1;Parent=gene-IY40_RS02795;Dbxref=GenBank:WP_043136159.1;Name=WP_043136159.1;Ontology_term=GO:0018209,GO:0046500,GO:0016491,GO:0051539;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=peptidyl-serine modification|0018209||IEA,S-adenosylmethionine metabolic process|0046500||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016929199.1;locus_tag=IY40_RS02795;product=anaerobic sulfatase maturase;protein_id=WP_043136159.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 254826 256538 . - . ID=gene-IY40_RS02800;Name=IY40_RS02800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS02800;old_locus_tag=IY40_02840 NZ_JPQY01000003.1 Protein Homology CDS 254826 256538 . - 0 ID=cds-WP_043136161.1;Parent=gene-IY40_RS02800;Dbxref=GenBank:WP_043136161.1;Name=WP_043136161.1;Ontology_term=GO:0004065,GO:0008081,GO:0046872;gbkey=CDS;go_function=arylsulfatase activity|0004065||IEA,phosphoric diester hydrolase activity|0008081||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016929200.1;locus_tag=IY40_RS02800;product=arylsulfatase;protein_id=WP_043136161.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 257020 257667 . + . ID=gene-IY40_RS02805;Name=IY40_RS02805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS02805;old_locus_tag=IY40_02845 NZ_JPQY01000003.1 Protein Homology CDS 257020 257667 . + 0 ID=cds-WP_043136164.1;Parent=gene-IY40_RS02805;Dbxref=GenBank:WP_043136164.1;Name=WP_043136164.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004933198.1;locus_tag=IY40_RS02805;product=helix-turn-helix transcriptional regulator;protein_id=WP_043136164.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 257807 258994 . + . ID=gene-IY40_RS02810;Name=IY40_RS02810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS02810;old_locus_tag=IY40_02850 NZ_JPQY01000003.1 Protein Homology CDS 257807 258994 . + 0 ID=cds-WP_043136167.1;Parent=gene-IY40_RS02810;Dbxref=GenBank:WP_043136167.1;Name=WP_043136167.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004933201.1;locus_tag=IY40_RS02810;product=MFS transporter;protein_id=WP_043136167.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 258991 260103 . + . ID=gene-IY40_RS02815;Name=IY40_RS02815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS02815;old_locus_tag=IY40_02855 NZ_JPQY01000003.1 Protein Homology CDS 258991 260103 . + 0 ID=cds-WP_043136170.1;Parent=gene-IY40_RS02815;Dbxref=GenBank:WP_043136170.1;Name=WP_043136170.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004949846.1;locus_tag=IY40_RS02815;product=class II histone deacetylase;protein_id=WP_043136170.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 260198 261004 . + . ID=gene-IY40_RS02820;Name=IY40_RS02820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS02820;old_locus_tag=IY40_02860 NZ_JPQY01000003.1 Protein Homology CDS 260198 261004 . + 0 ID=cds-WP_043136174.1;Parent=gene-IY40_RS02820;Dbxref=GenBank:WP_043136174.1;Name=WP_043136174.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017891517.1;locus_tag=IY40_RS02820;product=alpha/beta hydrolase;protein_id=WP_043136174.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 261051 261416 . - . ID=gene-IY40_RS02825;Name=IY40_RS02825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS02825;old_locus_tag=IY40_02865 NZ_JPQY01000003.1 Protein Homology CDS 261051 261416 . - 0 ID=cds-WP_015376517.1;Parent=gene-IY40_RS02825;Dbxref=GenBank:WP_015376517.1;Name=WP_015376517.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019454941.1;locus_tag=IY40_RS02825;product=cupin domain-containing protein;protein_id=WP_015376517.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 261435 262736 . - . ID=gene-IY40_RS02830;Name=IY40_RS02830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS02830;old_locus_tag=IY40_02870 NZ_JPQY01000003.1 Protein Homology CDS 261435 262736 . - 0 ID=cds-WP_033636959.1;Parent=gene-IY40_RS02830;Dbxref=GenBank:WP_033636959.1;Name=WP_033636959.1;Ontology_term=GO:0016491,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015376516.1;locus_tag=IY40_RS02830;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_033636959.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 262838 263596 . - . ID=gene-IY40_RS02835;Name=IY40_RS02835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS02835;old_locus_tag=IY40_02875 NZ_JPQY01000003.1 Protein Homology CDS 262838 263596 . - 0 ID=cds-WP_043136182.1;Parent=gene-IY40_RS02835;Dbxref=GenBank:WP_043136182.1;Name=WP_043136182.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012005065.1;locus_tag=IY40_RS02835;product=helix-turn-helix transcriptional regulator;protein_id=WP_043136182.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 263826 264953 . + . ID=gene-IY40_RS02840;Name=IY40_RS02840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS02840;old_locus_tag=IY40_02880 NZ_JPQY01000003.1 Protein Homology CDS 263826 264953 . + 0 ID=cds-WP_043136185.1;Parent=gene-IY40_RS02840;Dbxref=GenBank:WP_043136185.1;Name=WP_043136185.1;Ontology_term=GO:0016491,GO:0046872;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004949837.1;locus_tag=IY40_RS02840;product=iron-containing alcohol dehydrogenase;protein_id=WP_043136185.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 265089 266018 . - . ID=gene-IY40_RS02845;Name=IY40_RS02845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS02845;old_locus_tag=IY40_02890 NZ_JPQY01000003.1 Protein Homology CDS 265089 266018 . - 0 ID=cds-WP_025305173.1;Parent=gene-IY40_RS02845;Dbxref=GenBank:WP_025305173.1;Name=WP_025305173.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017891511.1;locus_tag=IY40_RS02845;product=LysR family transcriptional regulator;protein_id=WP_025305173.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 266154 267494 . + . ID=gene-IY40_RS02850;Name=IY40_RS02850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS02850;old_locus_tag=IY40_02895 NZ_JPQY01000003.1 Protein Homology CDS 266154 267494 . + 0 ID=cds-WP_025305172.1;Parent=gene-IY40_RS02850;Dbxref=GenBank:WP_025305172.1;Name=WP_025305172.1;Ontology_term=GO:0008483,GO:0030170;gbkey=CDS;go_function=transaminase activity|0008483||IEA,pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015376513.1;locus_tag=IY40_RS02850;product=omega-aminotransferase AptA;protein_id=WP_025305172.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 267505 269013 . + . ID=gene-IY40_RS02855;Name=IY40_RS02855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS02855;old_locus_tag=IY40_02900 NZ_JPQY01000003.1 Protein Homology CDS 267505 269013 . + 0 ID=cds-WP_043136191.1;Parent=gene-IY40_RS02855;Dbxref=GenBank:WP_043136191.1;Name=WP_043136191.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019454935.1;locus_tag=IY40_RS02855;product=CoA-acylating methylmalonate-semialdehyde dehydrogenase;protein_id=WP_043136191.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 269140 270516 . + . ID=gene-IY40_RS02860;Name=IY40_RS02860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS02860;old_locus_tag=IY40_02905 NZ_JPQY01000003.1 Protein Homology CDS 269140 270516 . + 0 ID=cds-WP_025305170.1;Parent=gene-IY40_RS02860;Dbxref=GenBank:WP_025305170.1;Name=WP_025305170.1;Ontology_term=GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019454934.1;locus_tag=IY40_RS02860;product=APC family permease;protein_id=WP_025305170.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 270519 271628 . + . ID=gene-IY40_RS02865;Name=IY40_RS02865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS02865;old_locus_tag=IY40_02910 NZ_JPQY01000003.1 Protein Homology CDS 270519 271628 . + 0 ID=cds-WP_043136194.1;Parent=gene-IY40_RS02865;Dbxref=GenBank:WP_043136194.1;Name=WP_043136194.1;Ontology_term=GO:0006508,GO:0004177;gbkey=CDS;go_function=aminopeptidase activity|0004177||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019454933.1;locus_tag=IY40_RS02865;product=DmpA family aminopeptidase;protein_id=WP_043136194.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 271663 272913 . - . ID=gene-IY40_RS02870;Name=IY40_RS02870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS02870;old_locus_tag=IY40_02915 NZ_JPQY01000003.1 Protein Homology CDS 271663 272913 . - 0 ID=cds-WP_043136199.1;Parent=gene-IY40_RS02870;Dbxref=GenBank:WP_043136199.1;Name=WP_043136199.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020453687.1;locus_tag=IY40_RS02870;product=phospholipase D-like domain-containing protein;protein_id=WP_043136199.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 272906 273556 . - . ID=gene-IY40_RS02875;Name=IY40_RS02875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS02875;old_locus_tag=IY40_02920 NZ_JPQY01000003.1 Protein Homology CDS 272906 273556 . - 0 ID=cds-WP_025305167.1;Parent=gene-IY40_RS02875;Dbxref=GenBank:WP_025305167.1;Name=WP_025305167.1;Ontology_term=GO:0015031,GO:0015252,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=proton channel activity|0015252||IEA;go_process=protein transport|0015031||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004949824.1;locus_tag=IY40_RS02875;product=MotA/TolQ/ExbB proton channel family protein;protein_id=WP_025305167.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 273603 275846 . - . ID=gene-IY40_RS02880;Name=IY40_RS02880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS02880;old_locus_tag=IY40_02925 NZ_JPQY01000003.1 Protein Homology CDS 273603 275846 . - 0 ID=cds-WP_043136202.1;Parent=gene-IY40_RS02880;Dbxref=GenBank:WP_043136202.1;Name=WP_043136202.1;Ontology_term=GO:0015891,GO:0015343,GO:0038023,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=siderophore-iron transmembrane transporter activity|0015343||IEA,signaling receptor activity|0038023||IEA;go_process=siderophore transport|0015891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006323436.1;locus_tag=IY40_RS02880;product=TonB-dependent receptor family protein;protein_id=WP_043136202.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 275886 276632 . - . ID=gene-IY40_RS02885;Name=IY40_RS02885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS02885;old_locus_tag=IY40_02930 NZ_JPQY01000003.1 Protein Homology CDS 275886 276632 . - 0 ID=cds-WP_043136207.1;Parent=gene-IY40_RS02885;Dbxref=GenBank:WP_043136207.1;Name=WP_043136207.1;Ontology_term=GO:0031992,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=energy transducer activity|0031992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004933242.1;locus_tag=IY40_RS02885;product=energy transducer TonB family protein;protein_id=WP_043136207.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 276634 277044 . - . ID=gene-IY40_RS02890;Name=IY40_RS02890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS02890;old_locus_tag=IY40_02935 NZ_JPQY01000003.1 Protein Homology CDS 276634 277044 . - 0 ID=cds-WP_025305164.1;Parent=gene-IY40_RS02890;Dbxref=GenBank:WP_025305164.1;Name=WP_025305164.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012005055.1;locus_tag=IY40_RS02890;product=ExbD/TolR family protein;protein_id=WP_025305164.1;transl_table=11 NZ_JPQY01000003.1 RefSeq pseudogene 277289 277474 . - . ID=gene-IY40_RS02895;Name=IY40_RS02895;end_range=277474,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IY40_RS02895;partial=true;pseudo=true NZ_JPQY01000003.1 Protein Homology CDS 277289 277474 . - 0 ID=cds-IY40_RS02895;Parent=gene-IY40_RS02895;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0003677;end_range=277474,.;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312625.1;locus_tag=IY40_RS02895;partial=true;product=helix-turn-helix domain-containing protein;pseudo=true;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 277594 278241 . + . ID=gene-IY40_RS02900;Name=IY40_RS02900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS02900;old_locus_tag=IY40_02945 NZ_JPQY01000003.1 Protein Homology CDS 277594 278241 . + 0 ID=cds-WP_038630178.1;Parent=gene-IY40_RS02900;Dbxref=GenBank:WP_038630178.1;Name=WP_038630178.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017802301.1;locus_tag=IY40_RS02900;product=hypothetical protein;protein_id=WP_038630178.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 278561 279481 . - . ID=gene-IY40_RS02910;Name=IY40_RS02910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS02910;old_locus_tag=IY40_02955 NZ_JPQY01000003.1 Protein Homology CDS 278561 279481 . - 0 ID=cds-WP_043136210.1;Parent=gene-IY40_RS02910;Dbxref=GenBank:WP_043136210.1;Name=WP_043136210.1;Ontology_term=GO:0016740;gbkey=CDS;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004933258.1;locus_tag=IY40_RS02910;product=L%2CD-transpeptidase family protein;protein_id=WP_043136210.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 279714 280589 . - . ID=gene-IY40_RS02915;Name=IY40_RS02915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS02915;old_locus_tag=IY40_02960 NZ_JPQY01000003.1 Protein Homology CDS 279714 280589 . - 0 ID=cds-WP_043136214.1;Parent=gene-IY40_RS02915;Dbxref=GenBank:WP_043136214.1;Name=WP_043136214.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015376503.1;locus_tag=IY40_RS02915;product=helix-turn-helix domain-containing protein;protein_id=WP_043136214.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 280600 280977 . - . ID=gene-IY40_RS02920;Name=IY40_RS02920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS02920;old_locus_tag=IY40_02965 NZ_JPQY01000003.1 Protein Homology CDS 280600 280977 . - 0 ID=cds-WP_043136216.1;Parent=gene-IY40_RS02920;Dbxref=GenBank:WP_043136216.1;Name=WP_043136216.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004933264.1;locus_tag=IY40_RS02920;product=hypothetical protein;protein_id=WP_043136216.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 281099 281920 . + . ID=gene-IY40_RS02925;Name=IY40_RS02925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS02925;old_locus_tag=IY40_02970 NZ_JPQY01000003.1 Protein Homology CDS 281099 281920 . + 0 ID=cds-WP_025305157.1;Parent=gene-IY40_RS02925;Dbxref=GenBank:WP_025305157.1;Name=WP_025305157.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019453262.1;locus_tag=IY40_RS02925;product=AraC family transcriptional regulator;protein_id=WP_025305157.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 281955 283091 . - . ID=gene-IY40_RS02930;Name=IY40_RS02930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS02930;old_locus_tag=IY40_02975 NZ_JPQY01000003.1 Protein Homology CDS 281955 283091 . - 0 ID=cds-WP_025305156.1;Parent=gene-IY40_RS02930;Dbxref=GenBank:WP_025305156.1;Name=WP_025305156.1;Ontology_term=GO:0015288,GO:0009279,GO:0016020;gbkey=CDS;go_component=cell outer membrane|0009279||IEA,membrane|0016020||IEA;go_function=porin activity|0015288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004933268.1;locus_tag=IY40_RS02930;product=porin;protein_id=WP_025305156.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 283463 284233 . - . ID=gene-IY40_RS02935;Name=IY40_RS02935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS02935;old_locus_tag=IY40_02980 NZ_JPQY01000003.1 Protein Homology CDS 283463 284233 . - 0 ID=cds-WP_043136221.1;Parent=gene-IY40_RS02935;Dbxref=GenBank:WP_043136221.1;Name=WP_043136221.1;Ontology_term=GO:0003858;gbkey=CDS;go_function=3-hydroxybutyrate dehydrogenase activity|0003858||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227337.1;locus_tag=IY40_RS02935;product=3-hydroxybutyrate dehydrogenase;protein_id=WP_043136221.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 284246 285637 . - . ID=gene-IY40_RS02940;Name=IY40_RS02940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS02940;old_locus_tag=IY40_02985 NZ_JPQY01000003.1 Protein Homology CDS 284246 285637 . - 0 ID=cds-WP_043136224.1;Parent=gene-IY40_RS02940;Dbxref=GenBank:WP_043136224.1;Name=WP_043136224.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000114546.1;locus_tag=IY40_RS02940;product=GntP family permease;protein_id=WP_043136224.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 285683 286606 . - . ID=gene-IY40_RS02945;Name=IY40_RS02945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS02945;old_locus_tag=IY40_02990 NZ_JPQY01000003.1 Protein Homology CDS 285683 286606 . - 0 ID=cds-WP_043136227.1;Parent=gene-IY40_RS02945;Dbxref=GenBank:WP_043136227.1;Name=WP_043136227.1;Ontology_term=GO:0006635,GO:0003857,GO:0070403;gbkey=CDS;go_function=(3S)-3-hydroxyacyl-CoA dehydrogenase (NAD+) activity|0003857||IEA,NAD+ binding|0070403||IEA;go_process=fatty acid beta-oxidation|0006635||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004933274.1;locus_tag=IY40_RS02945;product=3-hydroxyacyl-CoA dehydrogenase family protein;protein_id=WP_043136227.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 286625 287809 . - . ID=gene-IY40_RS02950;Name=IY40_RS02950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS02950;old_locus_tag=IY40_02995 NZ_JPQY01000003.1 Protein Homology CDS 286625 287809 . - 0 ID=cds-WP_043136230.1;Parent=gene-IY40_RS02950;Dbxref=GenBank:WP_043136230.1;Name=WP_043136230.1;Ontology_term=GO:0003985;gbkey=CDS;go_function=acetyl-CoA C-acetyltransferase activity|0003985||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019453267.1;locus_tag=IY40_RS02950;product=acetyl-CoA C-acetyltransferase;protein_id=WP_043136230.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 287824 288477 . - . ID=gene-IY40_RS02955;Name=IY40_RS02955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS02955;old_locus_tag=IY40_03000 NZ_JPQY01000003.1 Protein Homology CDS 287824 288477 . - 0 ID=cds-WP_043136232.1;Parent=gene-IY40_RS02955;Dbxref=GenBank:WP_043136232.1;Name=WP_043136232.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012005046.1;locus_tag=IY40_RS02955;product=CoA transferase subunit B;protein_id=WP_043136232.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 288489 289187 . - . ID=gene-IY40_RS02960;Name=IY40_RS02960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS02960;old_locus_tag=IY40_03005 NZ_JPQY01000003.1 Protein Homology CDS 288489 289187 . - 0 ID=cds-WP_004933280.1;Parent=gene-IY40_RS02960;Dbxref=GenBank:WP_004933280.1;Name=WP_004933280.1;Ontology_term=GO:0008410;gbkey=CDS;go_function=CoA-transferase activity|0008410||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004933280.1;locus_tag=IY40_RS02960;product=CoA transferase subunit A;protein_id=WP_004933280.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 289356 290273 . + . ID=gene-IY40_RS02965;Name=IY40_RS02965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS02965;old_locus_tag=IY40_03010 NZ_JPQY01000003.1 Protein Homology CDS 289356 290273 . + 0 ID=cds-WP_043136234.1;Parent=gene-IY40_RS02965;Dbxref=GenBank:WP_043136234.1;Name=WP_043136234.1;Ontology_term=GO:0003677,GO:0003700,GO:0005829;gbkey=CDS;go_component=cytosol|0005829||IEA;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016929229.1;locus_tag=IY40_RS02965;product=LysR family transcriptional regulator;protein_id=WP_043136234.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 290245 290445 . + . ID=gene-IY40_RS26345;Name=IY40_RS26345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS26345 NZ_JPQY01000003.1 GeneMarkS-2+ CDS 290245 290445 . + 0 ID=cds-WP_193389596.1;Parent=gene-IY40_RS26345;Dbxref=GenBank:WP_193389596.1;Name=WP_193389596.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IY40_RS26345;product=hypothetical protein;protein_id=WP_193389596.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 290442 290843 . + . ID=gene-IY40_RS02970;Name=IY40_RS02970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS02970;old_locus_tag=IY40_03015 NZ_JPQY01000003.1 Protein Homology CDS 290442 290843 . + 0 ID=cds-WP_043136237.1;Parent=gene-IY40_RS02970;Dbxref=GenBank:WP_043136237.1;Name=WP_043136237.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF045617.1;locus_tag=IY40_RS02970;product=putative T6SS immunity periplasmic lipoprotein;protein_id=WP_043136237.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 290859 291158 . - . ID=gene-IY40_RS02975;Name=IY40_RS02975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS02975;old_locus_tag=IY40_03020 NZ_JPQY01000003.1 Protein Homology CDS 290859 291158 . - 0 ID=cds-WP_060440840.1;Parent=gene-IY40_RS02975;Dbxref=GenBank:WP_060440840.1;Name=WP_060440840.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016929234.1;locus_tag=IY40_RS02975;product=hypothetical protein;protein_id=WP_060440840.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 291404 292774 . + . ID=gene-IY40_RS02980;Name=IY40_RS02980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS02980;old_locus_tag=IY40_03025 NZ_JPQY01000003.1 Protein Homology CDS 291404 292774 . + 0 ID=cds-WP_043136241.1;Parent=gene-IY40_RS02980;Dbxref=GenBank:WP_043136241.1;Name=WP_043136241.1;Ontology_term=GO:0006542,GO:0004356,GO:0005524,GO:0046872;gbkey=CDS;go_function=glutamine synthetase activity|0004356||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=glutamine biosynthetic process|0006542||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013811353.1;locus_tag=IY40_RS02980;product=glutamine synthetase family protein;protein_id=WP_043136241.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 292807 293217 . + . ID=gene-IY40_RS02985;Name=IY40_RS02985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS02985;old_locus_tag=IY40_03030 NZ_JPQY01000003.1 Protein Homology CDS 292807 293217 . + 0 ID=cds-WP_043136244.1;Parent=gene-IY40_RS02985;Dbxref=GenBank:WP_043136244.1;Name=WP_043136244.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016929236.1;locus_tag=IY40_RS02985;product=GNAT family N-acetyltransferase;protein_id=WP_043136244.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 293231 293920 . + . ID=gene-IY40_RS02990;Name=IY40_RS02990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS02990;old_locus_tag=IY40_03035 NZ_JPQY01000003.1 Protein Homology CDS 293231 293920 . + 0 ID=cds-WP_025305142.1;Parent=gene-IY40_RS02990;Dbxref=GenBank:WP_025305142.1;Name=WP_025305142.1;Ontology_term=GO:0005992,GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;go_process=trehalose biosynthetic process|0005992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016929237.1;locus_tag=IY40_RS02990;product=trehalose-6-phosphate synthase;protein_id=WP_025305142.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 294405 296126 . + . ID=gene-IY40_RS02995;Name=IY40_RS02995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS02995;old_locus_tag=IY40_03045 NZ_JPQY01000003.1 Protein Homology CDS 294405 296126 . + 0 ID=cds-WP_043136248.1;Parent=gene-IY40_RS02995;Dbxref=GenBank:WP_043136248.1;Name=WP_043136248.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016535261.1;locus_tag=IY40_RS02995;product=ABC transporter permease;protein_id=WP_043136248.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 296142 296933 . + . ID=gene-IY40_RS03000;Name=IY40_RS03000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS03000;old_locus_tag=IY40_03050 NZ_JPQY01000003.1 Protein Homology CDS 296142 296933 . + 0 ID=cds-WP_043136251.1;Parent=gene-IY40_RS03000;Dbxref=GenBank:WP_043136251.1;Name=WP_043136251.1;Ontology_term=GO:0006810,GO:0005215,GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=transporter activity|0005215||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019453279.1;locus_tag=IY40_RS03000;product=ABC transporter ATP-binding protein;protein_id=WP_043136251.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 296966 298048 . + . ID=gene-IY40_RS03005;Name=IY40_RS03005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS03005;old_locus_tag=IY40_03055 NZ_JPQY01000003.1 Protein Homology CDS 296966 298048 . + 0 ID=cds-WP_043136253.1;Parent=gene-IY40_RS03005;Dbxref=GenBank:WP_043136253.1;Name=WP_043136253.1;Ontology_term=GO:0015288,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=porin activity|0015288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017892288.1;locus_tag=IY40_RS03005;product=porin;protein_id=WP_043136253.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 298634 299413 . + . ID=gene-IY40_RS03010;Name=IY40_RS03010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS03010;old_locus_tag=IY40_03060 NZ_JPQY01000003.1 Protein Homology CDS 298634 299413 . + 0 ID=cds-WP_043136255.1;Parent=gene-IY40_RS03010;Dbxref=GenBank:WP_043136255.1;Name=WP_043136255.1;Ontology_term=GO:0006810,GO:0005215,GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=transporter activity|0005215||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019453281.1;locus_tag=IY40_RS03010;product=ABC transporter ATP-binding protein;protein_id=WP_043136255.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 299545 300237 . + . ID=gene-IY40_RS03015;Name=IY40_RS03015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS03015;old_locus_tag=IY40_03065 NZ_JPQY01000003.1 Protein Homology CDS 299545 300237 . + 0 ID=cds-WP_019453282.1;Parent=gene-IY40_RS03015;Dbxref=GenBank:WP_019453282.1;Name=WP_019453282.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019453282.1;locus_tag=IY40_RS03015;product=MgtC/SapB family protein;protein_id=WP_019453282.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 300265 301149 . + . ID=gene-IY40_RS03020;Name=IY40_RS03020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS03020;old_locus_tag=IY40_03070 NZ_JPQY01000003.1 Protein Homology CDS 300265 301149 . + 0 ID=cds-WP_043136258.1;Parent=gene-IY40_RS03020;Dbxref=GenBank:WP_043136258.1;Name=WP_043136258.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:NF015431.6;locus_tag=IY40_RS03020;product=LysR family transcriptional regulator;protein_id=WP_043136258.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 301154 302248 . - . ID=gene-IY40_RS03025;Name=sfnG;gbkey=Gene;gene=sfnG;gene_biotype=protein_coding;locus_tag=IY40_RS03025;old_locus_tag=IY40_03075 NZ_JPQY01000003.1 Protein Homology CDS 301154 302248 . - 0 ID=cds-WP_025305137.1;Parent=gene-IY40_RS03025;Dbxref=GenBank:WP_025305137.1;Name=WP_025305137.1;Ontology_term=GO:0006790,GO:0004497,GO:0010181;gbkey=CDS;gene=sfnG;go_function=monooxygenase activity|0004497||IEA,FMN binding|0010181||IEA;go_process=sulfur compound metabolic process|0006790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004949798.1;locus_tag=IY40_RS03025;product=dimethylsulfone monooxygenase SfnG;protein_id=WP_025305137.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 302685 304865 . + . ID=gene-IY40_RS03030;Name=IY40_RS03030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS03030;old_locus_tag=IY40_03080 NZ_JPQY01000003.1 Protein Homology CDS 302685 304865 . + 0 ID=cds-WP_043136262.1;Parent=gene-IY40_RS03030;Dbxref=GenBank:WP_043136262.1;Name=WP_043136262.1;Ontology_term=GO:0009267,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=cellular response to starvation|0009267||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015839379.1;locus_tag=IY40_RS03030;product=carbon starvation CstA family protein;protein_id=WP_043136262.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 305084 305287 . + . ID=gene-IY40_RS03035;Name=IY40_RS03035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS03035;old_locus_tag=IY40_03085 NZ_JPQY01000003.1 Protein Homology CDS 305084 305287 . + 0 ID=cds-WP_004953088.1;Parent=gene-IY40_RS03035;Dbxref=GenBank:WP_004953088.1;Name=WP_004953088.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313339.1;locus_tag=IY40_RS03035;product=YbdD/YjiX family protein;protein_id=WP_004953088.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 305309 306271 . + . ID=gene-IY40_RS03040;Name=yjiA;gbkey=Gene;gene=yjiA;gene_biotype=protein_coding;locus_tag=IY40_RS03040;old_locus_tag=IY40_03090 NZ_JPQY01000003.1 Protein Homology CDS 305309 306271 . + 0 ID=cds-WP_043136266.1;Parent=gene-IY40_RS03040;Dbxref=GenBank:WP_043136266.1;Name=WP_043136266.1;gbkey=CDS;gene=yjiA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013811349.1;locus_tag=IY40_RS03040;product=GTPase;protein_id=WP_043136266.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 306328 306750 . + . ID=gene-IY40_RS03045;Name=IY40_RS03045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS03045;old_locus_tag=IY40_03095 NZ_JPQY01000003.1 Protein Homology CDS 306328 306750 . + 0 ID=cds-WP_043136269.1;Parent=gene-IY40_RS03045;Dbxref=GenBank:WP_043136269.1;Name=WP_043136269.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019453286.1;locus_tag=IY40_RS03045;product=hypothetical protein;protein_id=WP_043136269.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 306901 307701 . - . ID=gene-IY40_RS03050;Name=IY40_RS03050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS03050;old_locus_tag=IY40_03100 NZ_JPQY01000003.1 Protein Homology CDS 306901 307701 . - 0 ID=cds-WP_043136314.1;Parent=gene-IY40_RS03050;Dbxref=GenBank:WP_043136314.1;Name=WP_043136314.1;Ontology_term=GO:0003677,GO:0004519,GO:0008270;gbkey=CDS;go_function=DNA binding|0003677||IEA,endonuclease activity|0004519||IEA,zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019453287.1;locus_tag=IY40_RS03050;product=HNH endonuclease;protein_id=WP_043136314.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 307932 308852 . - . ID=gene-IY40_RS03055;Name=IY40_RS03055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS03055;old_locus_tag=IY40_03105 NZ_JPQY01000003.1 Protein Homology CDS 307932 308852 . - 0 ID=cds-WP_043136272.1;Parent=gene-IY40_RS03055;Dbxref=GenBank:WP_043136272.1;Name=WP_043136272.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019453288.1;locus_tag=IY40_RS03055;product=WYL domain-containing protein;protein_id=WP_043136272.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 309150 310061 . + . ID=gene-IY40_RS03060;Name=IY40_RS03060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS03060;old_locus_tag=IY40_03110 NZ_JPQY01000003.1 Protein Homology CDS 309150 310061 . + 0 ID=cds-WP_043136275.1;Parent=gene-IY40_RS03060;Dbxref=GenBank:WP_043136275.1;Name=WP_043136275.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017628223.1;locus_tag=IY40_RS03060;product=hypothetical protein;protein_id=WP_043136275.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 310147 310320 . - . ID=gene-IY40_RS26215;Name=IY40_RS26215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS26215 NZ_JPQY01000003.1 GeneMarkS-2+ CDS 310147 310320 . - 0 ID=cds-WP_154618042.1;Parent=gene-IY40_RS26215;Dbxref=GenBank:WP_154618042.1;Name=WP_154618042.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IY40_RS26215;product=hypothetical protein;protein_id=WP_154618042.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 310596 311057 . - . ID=gene-IY40_RS03065;Name=IY40_RS03065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS03065;old_locus_tag=IY40_03120 NZ_JPQY01000003.1 GeneMarkS-2+ CDS 310596 311057 . - 0 ID=cds-WP_142590963.1;Parent=gene-IY40_RS03065;Dbxref=GenBank:WP_142590963.1;Name=WP_142590963.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IY40_RS03065;product=hypothetical protein;protein_id=WP_142590963.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 311434 311518 . - . ID=gene-IY40_RS03070;Name=IY40_RS03070;gbkey=Gene;gene_biotype=tRNA;locus_tag=IY40_RS03070;old_locus_tag=IY40_03125 NZ_JPQY01000003.1 tRNAscan-SE tRNA 311434 311518 . - . ID=rna-IY40_RS03070;Parent=gene-IY40_RS03070;anticodon=(pos:complement(311482..311484));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=IY40_RS03070;product=tRNA-Leu NZ_JPQY01000003.1 tRNAscan-SE exon 311434 311518 . - . ID=exon-IY40_RS03070-1;Parent=rna-IY40_RS03070;anticodon=(pos:complement(311482..311484));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=IY40_RS03070;product=tRNA-Leu NZ_JPQY01000003.1 RefSeq gene 311798 312511 . + . ID=gene-IY40_RS03075;Name=deoC;gbkey=Gene;gene=deoC;gene_biotype=protein_coding;locus_tag=IY40_RS03075;old_locus_tag=IY40_03130 NZ_JPQY01000003.1 Protein Homology CDS 311798 312511 . + 0 ID=cds-WP_212637134.1;Parent=gene-IY40_RS03075;Dbxref=GenBank:WP_212637134.1;Name=WP_212637134.1;Ontology_term=GO:0009264,GO:0004139,GO:0005737;gbkey=CDS;gene=deoC;go_component=cytoplasm|0005737||IEA;go_function=deoxyribose-phosphate aldolase activity|0004139||IEA;go_process=deoxyribonucleotide catabolic process|0009264||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004933338.1;locus_tag=IY40_RS03075;product=deoxyribose-phosphate aldolase;protein_id=WP_212637134.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 312577 314103 . + . ID=gene-IY40_RS03080;Name=IY40_RS03080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS03080;old_locus_tag=IY40_03135 NZ_JPQY01000003.1 Protein Homology CDS 312577 314103 . + 0 ID=cds-WP_043136284.1;Parent=gene-IY40_RS03080;Dbxref=GenBank:WP_043136284.1;Name=WP_043136284.1;Ontology_term=GO:0005998,GO:0042732,GO:0004856,GO:0005524;gbkey=CDS;go_function=D-xylulokinase activity|0004856||IEA,ATP binding|0005524||IEA;go_process=xylulose catabolic process|0005998||IEA,D-xylose metabolic process|0042732||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004933339.1;locus_tag=IY40_RS03080;product=xylulokinase;protein_id=WP_043136284.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 314103 315434 . + . ID=gene-IY40_RS03085;Name=fucP;gbkey=Gene;gene=fucP;gene_biotype=protein_coding;locus_tag=IY40_RS03085;old_locus_tag=IY40_03140 NZ_JPQY01000003.1 Protein Homology CDS 314103 315434 . + 0 ID=cds-WP_043136287.1;Parent=gene-IY40_RS03085;Dbxref=GenBank:WP_043136287.1;Name=WP_043136287.1;Ontology_term=GO:0015756,GO:0015150,GO:0015535;gbkey=CDS;gene=fucP;go_function=fucose transmembrane transporter activity|0015150||IEA,fucose:proton symporter activity|0015535||IEA;go_process=fucose transmembrane transport|0015756||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004933342.1;locus_tag=IY40_RS03085;product=L-fucose:H+ symporter permease;protein_id=WP_043136287.1;transl_table=11 NZ_JPQY01000003.1 RefSeq gene 315436 315828 . + . ID=gene-IY40_RS03090;Name=IY40_RS03090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS03090;old_locus_tag=IY40_03145 NZ_JPQY01000003.1 Protein Homology CDS 315436 315828 . + 0 ID=cds-WP_043136290.1;Parent=gene-IY40_RS03090;Dbxref=GenBank:WP_043136290.1;Name=WP_043136290.1;Ontology_term=GO:0003824,GO:0046872;gbkey=CDS;go_function=catalytic activity|0003824||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: protein motif:HMM:NF013098.6;locus_tag=IY40_RS03090;product=VOC family protein;protein_id=WP_043136290.1;transl_table=11 ##sequence-region NZ_JPQY01000004.1 1 125903 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=615 NZ_JPQY01000004.1 RefSeq region 1 125903 . + . ID=NZ_JPQY01000004.1:1..125903;Dbxref=taxon:615;collected-by=Mahloro H. Serepa%3B Vincent M. Gray;collection-date=2013-04-11;country=South Africa: North West Province;gbkey=Src;genome=genomic;identified-by=Mahloro H. Serepa%3B Vincent M. Gray;isolation-source=entomopathogenic nematode Oscheius sp. MCB living in soil;mol_type=genomic DNA;nat-host=Oscheius sp. MCB;strain=MCB NZ_JPQY01000004.1 RefSeq gene 79 1083 . + . ID=gene-IY40_RS03095;Name=IY40_RS03095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS03095;old_locus_tag=IY40_03150 NZ_JPQY01000004.1 Protein Homology CDS 79 1083 . + 0 ID=cds-WP_043136352.1;Parent=gene-IY40_RS03095;Dbxref=GenBank:WP_043136352.1;Name=WP_043136352.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210220.1;locus_tag=IY40_RS03095;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_043136352.1;transl_table=11 NZ_JPQY01000004.1 RefSeq gene 1090 1782 . - . ID=gene-IY40_RS03100;Name=araD;gbkey=Gene;gene=araD;gene_biotype=protein_coding;locus_tag=IY40_RS03100;old_locus_tag=IY40_03155 NZ_JPQY01000004.1 Protein Homology CDS 1090 1782 . - 0 ID=cds-WP_033632583.1;Parent=gene-IY40_RS03100;Dbxref=GenBank:WP_033632583.1;Name=WP_033632583.1;Ontology_term=GO:0019568,GO:0008270,GO:0008742;gbkey=CDS;gene=araD;go_function=zinc ion binding|0008270||IEA,L-ribulose-phosphate 4-epimerase activity|0008742||IEA;go_process=arabinose catabolic process|0019568||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004955548.1;locus_tag=IY40_RS03100;product=L-ribulose-5-phosphate 4-epimerase;protein_id=WP_033632583.1;transl_table=11 NZ_JPQY01000004.1 RefSeq gene 1776 2645 . - . ID=gene-IY40_RS03105;Name=IY40_RS03105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS03105;old_locus_tag=IY40_03160 NZ_JPQY01000004.1 Protein Homology CDS 1776 2645 . - 0 ID=cds-WP_043136356.1;Parent=gene-IY40_RS03105;Dbxref=GenBank:WP_043136356.1;Name=WP_043136356.1;Ontology_term=GO:0005975,GO:0016861;gbkey=CDS;go_function=intramolecular oxidoreductase activity%2C interconverting aldoses and ketoses|0016861||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019453587.1;locus_tag=IY40_RS03105;product=L-ribulose-5-phosphate 3-epimerase;protein_id=WP_043136356.1;transl_table=11 NZ_JPQY01000004.1 RefSeq gene 2632 4119 . - . ID=gene-IY40_RS03110;Name=IY40_RS03110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS03110;old_locus_tag=IY40_03165 NZ_JPQY01000004.1 Protein Homology CDS 2632 4119 . - 0 ID=cds-WP_043136360.1;Parent=gene-IY40_RS03110;Dbxref=GenBank:WP_043136360.1;Name=WP_043136360.1;Ontology_term=GO:0016310,GO:0005524,GO:0019200;gbkey=CDS;go_function=ATP binding|0005524||IEA,carbohydrate kinase activity|0019200||IEA;go_process=phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015378499.1;locus_tag=IY40_RS03110;product=FGGY-family carbohydrate kinase;protein_id=WP_043136360.1;transl_table=11 NZ_JPQY01000004.1 RefSeq gene 4128 5117 . - . ID=gene-IY40_RS03115;Name=IY40_RS03115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS03115;old_locus_tag=IY40_03170 NZ_JPQY01000004.1 Protein Homology CDS 4128 5117 . - 0 ID=cds-WP_043136365.1;Parent=gene-IY40_RS03115;Dbxref=GenBank:WP_043136365.1;Name=WP_043136365.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015378500.1;locus_tag=IY40_RS03115;product=ABC transporter permease;protein_id=WP_043136365.1;transl_table=11 NZ_JPQY01000004.1 RefSeq gene 5114 6604 . - . ID=gene-IY40_RS03120;Name=IY40_RS03120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS03120;old_locus_tag=IY40_03175 NZ_JPQY01000004.1 Protein Homology CDS 5114 6604 . - 0 ID=cds-WP_043136367.1;Parent=gene-IY40_RS03120;Dbxref=GenBank:WP_043136367.1;Name=WP_043136367.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192642.1;locus_tag=IY40_RS03120;product=sugar ABC transporter ATP-binding protein;protein_id=WP_043136367.1;transl_table=11 NZ_JPQY01000004.1 RefSeq gene 6659 7576 . - . ID=gene-IY40_RS03125;Name=IY40_RS03125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS03125;old_locus_tag=IY40_03180 NZ_JPQY01000004.1 Protein Homology CDS 6659 7576 . - 0 ID=cds-WP_015378502.1;Parent=gene-IY40_RS03125;Dbxref=GenBank:WP_015378502.1;Name=WP_015378502.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192643.1;locus_tag=IY40_RS03125;product=ABC transporter substrate-binding protein;protein_id=WP_015378502.1;transl_table=11 NZ_JPQY01000004.1 RefSeq gene 7712 8779 . - . ID=gene-IY40_RS03130;Name=IY40_RS03130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS03130;old_locus_tag=IY40_03185 NZ_JPQY01000004.1 Protein Homology CDS 7712 8779 . - 0 ID=cds-WP_043136369.1;Parent=gene-IY40_RS03130;Dbxref=GenBank:WP_043136369.1;Name=WP_043136369.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004955566.1;locus_tag=IY40_RS03130;product=zinc-binding dehydrogenase;protein_id=WP_043136369.1;transl_table=11 NZ_JPQY01000004.1 RefSeq gene 9134 9451 . - . ID=gene-IY40_RS03135;Name=tmaR;gbkey=Gene;gene=tmaR;gene_biotype=protein_coding;locus_tag=IY40_RS03135;old_locus_tag=IY40_03190 NZ_JPQY01000004.1 Protein Homology CDS 9134 9451 . - 0 ID=cds-WP_004935612.1;Parent=gene-IY40_RS03135;Dbxref=GenBank:WP_004935612.1;Name=WP_004935612.1;gbkey=CDS;gene=tmaR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006318052.1;locus_tag=IY40_RS03135;product=PTS system regulator TmaR;protein_id=WP_004935612.1;transl_table=11 NZ_JPQY01000004.1 RefSeq gene 9612 10679 . - . ID=gene-IY40_RS03140;Name=IY40_RS03140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS03140;old_locus_tag=IY40_03195 NZ_JPQY01000004.1 Protein Homology CDS 9612 10679 . - 0 ID=cds-WP_043136371.1;Parent=gene-IY40_RS03140;Dbxref=GenBank:WP_043136371.1;Name=WP_043136371.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016927008.1;locus_tag=IY40_RS03140;product=FUSC family protein;protein_id=WP_043136371.1;transl_table=11 NZ_JPQY01000004.1 RefSeq gene 10774 11541 . - . ID=gene-IY40_RS03145;Name=IY40_RS03145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS03145;old_locus_tag=IY40_03200 NZ_JPQY01000004.1 Protein Homology CDS 10774 11541 . - 0 ID=cds-WP_043136373.1;Parent=gene-IY40_RS03145;Dbxref=GenBank:WP_043136373.1;Name=WP_043136373.1;Ontology_term=GO:0071555,GO:0008270,GO:0008745,GO:0042834,GO:0046872;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA,peptidoglycan binding|0042834||IEA,metal ion binding|0046872||IEA;go_process=cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004946968.1;locus_tag=IY40_RS03145;product=N-acetylmuramoyl-L-alanine amidase;protein_id=WP_043136373.1;transl_table=11 NZ_JPQY01000004.1 RefSeq gene 11718 12464 . + . ID=gene-IY40_RS03150;Name=IY40_RS03150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS03150;old_locus_tag=IY40_03205 NZ_JPQY01000004.1 Protein Homology CDS 11718 12464 . + 0 ID=cds-WP_033643785.1;Parent=gene-IY40_RS03150;Dbxref=GenBank:WP_033643785.1;Name=WP_033643785.1;Ontology_term=GO:0006508,GO:0008236;gbkey=CDS;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006326620.1;locus_tag=IY40_RS03150;product=S24 family peptidase;protein_id=WP_033643785.1;transl_table=11 NZ_JPQY01000004.1 RefSeq gene 12499 13608 . - . ID=gene-IY40_RS03155;Name=IY40_RS03155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS03155;old_locus_tag=IY40_03210 NZ_JPQY01000004.1 Protein Homology CDS 12499 13608 . - 0 ID=cds-WP_025303522.1;Parent=gene-IY40_RS03155;Dbxref=GenBank:WP_025303522.1;Name=WP_025303522.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006326621.1;locus_tag=IY40_RS03155;product=SDR family oxidoreductase;protein_id=WP_025303522.1;transl_table=11 NZ_JPQY01000004.1 RefSeq gene 13867 14073 . + . ID=gene-IY40_RS03160;Name=IY40_RS03160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS03160;old_locus_tag=IY40_03215 NZ_JPQY01000004.1 Protein Homology CDS 13867 14073 . + 0 ID=cds-WP_043136378.1;Parent=gene-IY40_RS03160;Dbxref=GenBank:WP_043136378.1;Name=WP_043136378.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016927004.1;locus_tag=IY40_RS03160;product=hypothetical protein;protein_id=WP_043136378.1;transl_table=11 NZ_JPQY01000004.1 RefSeq gene 14128 14316 . + . ID=gene-IY40_RS03165;Name=IY40_RS03165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS03165;old_locus_tag=IY40_03220 NZ_JPQY01000004.1 Protein Homology CDS 14128 14316 . + 0 ID=cds-WP_025303524.1;Parent=gene-IY40_RS03165;Dbxref=GenBank:WP_025303524.1;Name=WP_025303524.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013813758.1;locus_tag=IY40_RS03165;product=DNA polymerase III subunit theta;protein_id=WP_025303524.1;transl_table=11 NZ_JPQY01000004.1 RefSeq gene 14407 15834 . + . ID=gene-IY40_RS03170;Name=sbcB;gbkey=Gene;gene=sbcB;gene_biotype=protein_coding;locus_tag=IY40_RS03170;old_locus_tag=IY40_03225 NZ_JPQY01000004.1 Protein Homology CDS 14407 15834 . + 0 ID=cds-WP_025303525.1;Parent=gene-IY40_RS03170;Dbxref=GenBank:WP_025303525.1;Name=WP_025303525.1;Ontology_term=GO:0006281,GO:0000175,GO:0003676,GO:0008310;gbkey=CDS;gene=sbcB;go_function=3'-5'-RNA exonuclease activity|0000175||IEA,nucleic acid binding|0003676||IEA,single-stranded DNA 3'-5' DNA exonuclease activity|0008310||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012145930.1;locus_tag=IY40_RS03170;product=exodeoxyribonuclease I;protein_id=WP_025303525.1;transl_table=11 NZ_JPQY01000004.1 RefSeq gene 15906 17273 . - . ID=gene-IY40_RS03175;Name=IY40_RS03175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS03175;old_locus_tag=IY40_03230 NZ_JPQY01000004.1 Protein Homology CDS 15906 17273 . - 0 ID=cds-WP_025303526.1;Parent=gene-IY40_RS03175;Dbxref=GenBank:WP_025303526.1;Name=WP_025303526.1;Ontology_term=GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006318060.1;locus_tag=IY40_RS03175;product=APC family permease;protein_id=WP_025303526.1;transl_table=11 NZ_JPQY01000004.1 RefSeq gene 17809 19227 . - . ID=gene-IY40_RS03180;Name=IY40_RS03180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS03180;old_locus_tag=IY40_03235 NZ_JPQY01000004.1 Protein Homology CDS 17809 19227 . - 0 ID=cds-WP_043136386.1;Parent=gene-IY40_RS03180;Dbxref=GenBank:WP_043136386.1;Name=WP_043136386.1;Ontology_term=GO:0006542,GO:0004356,GO:0005524,GO:0046872;gbkey=CDS;go_function=glutamine synthetase activity|0004356||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=glutamine biosynthetic process|0006542||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415813.4;locus_tag=IY40_RS03180;product=glutamine synthetase family protein;protein_id=WP_043136386.1;transl_table=11 NZ_JPQY01000004.1 RefSeq gene 19623 20180 . + . ID=gene-IY40_RS03185;Name=puuR;gbkey=Gene;gene=puuR;gene_biotype=protein_coding;locus_tag=IY40_RS03185;old_locus_tag=IY40_03240 NZ_JPQY01000004.1 Protein Homology CDS 19623 20180 . + 0 ID=cds-WP_025303528.1;Parent=gene-IY40_RS03185;Dbxref=GenBank:WP_025303528.1;Name=WP_025303528.1;gbkey=CDS;gene=puuR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001464354.1;locus_tag=IY40_RS03185;product=HTH-type transcriptional regulator PuuR;protein_id=WP_025303528.1;transl_table=11 NZ_JPQY01000004.1 RefSeq gene 20336 21847 . + . ID=gene-IY40_RS03190;Name=IY40_RS03190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS03190;old_locus_tag=IY40_03245 NZ_JPQY01000004.1 Protein Homology CDS 20336 21847 . + 0 ID=cds-WP_043136388.1;Parent=gene-IY40_RS03190;Dbxref=GenBank:WP_043136388.1;Name=WP_043136388.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013813765.1;locus_tag=IY40_RS03190;product=sugar ABC transporter ATP-binding protein;protein_id=WP_043136388.1;transl_table=11 NZ_JPQY01000004.1 RefSeq gene 21844 22839 . + . ID=gene-IY40_RS03195;Name=IY40_RS03195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS03195;old_locus_tag=IY40_03250 NZ_JPQY01000004.1 Protein Homology CDS 21844 22839 . + 0 ID=cds-WP_016926998.1;Parent=gene-IY40_RS03195;Dbxref=GenBank:WP_016926998.1;Name=WP_016926998.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012145935.1;locus_tag=IY40_RS03195;product=ABC transporter permease;protein_id=WP_016926998.1;transl_table=11 NZ_JPQY01000004.1 RefSeq gene 23084 25072 . + . ID=gene-IY40_RS03200;Name=IY40_RS03200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS03200;old_locus_tag=IY40_03255 NZ_JPQY01000004.1 Protein Homology CDS 23084 25072 . + 0 ID=cds-WP_043136393.1;Parent=gene-IY40_RS03200;Dbxref=GenBank:WP_043136393.1;Name=WP_043136393.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016926997.1;locus_tag=IY40_RS03200;product=ligand-gated channel protein;protein_id=WP_043136393.1;transl_table=11 NZ_JPQY01000004.1 RefSeq gene 25128 26081 . + . ID=gene-IY40_RS03205;Name=IY40_RS03205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS03205;old_locus_tag=IY40_03260 NZ_JPQY01000004.1 Protein Homology CDS 25128 26081 . + 0 ID=cds-WP_043136395.1;Parent=gene-IY40_RS03205;Dbxref=GenBank:WP_043136395.1;Name=WP_043136395.1;Ontology_term=GO:0005524,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019453609.1;locus_tag=IY40_RS03205;product=siderophore ABC transporter substrate-binding protein;protein_id=WP_043136395.1;transl_table=11 NZ_JPQY01000004.1 RefSeq gene 26115 26903 . - . ID=gene-IY40_RS03210;Name=IY40_RS03210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS03210;old_locus_tag=IY40_03265 NZ_JPQY01000004.1 Protein Homology CDS 26115 26903 . - 0 ID=cds-WP_004935663.1;Parent=gene-IY40_RS03210;Dbxref=GenBank:WP_004935663.1;Name=WP_004935663.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208783.1;locus_tag=IY40_RS03210;product=ABC transporter ATP-binding protein;protein_id=WP_004935663.1;transl_table=11 NZ_JPQY01000004.1 RefSeq gene 26900 27982 . - . ID=gene-IY40_RS03215;Name=IY40_RS03215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS03215;old_locus_tag=IY40_03270 NZ_JPQY01000004.1 Protein Homology CDS 26900 27982 . - 0 ID=cds-WP_025303533.1;Parent=gene-IY40_RS03215;Dbxref=GenBank:WP_025303533.1;Name=WP_025303533.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015673046.1;locus_tag=IY40_RS03215;product=FecCD family ABC transporter permease;protein_id=WP_025303533.1;transl_table=11 NZ_JPQY01000004.1 RefSeq gene 28347 29447 . + . ID=gene-IY40_RS03220;Name=IY40_RS03220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS03220;old_locus_tag=IY40_03275 NZ_JPQY01000004.1 Protein Homology CDS 28347 29447 . + 0 ID=cds-WP_043136398.1;Parent=gene-IY40_RS03220;Dbxref=GenBank:WP_043136398.1;Name=WP_043136398.1;Ontology_term=GO:0005525,GO:0046872,GO:0052621,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=GTP binding|0005525||IEA,metal ion binding|0046872||IEA,diguanylate cyclase activity|0052621||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015378516.1;locus_tag=IY40_RS03220;product=GGDEF domain-containing protein;protein_id=WP_043136398.1;transl_table=11 NZ_JPQY01000004.1 RefSeq gene 29493 30971 . - . ID=gene-IY40_RS03225;Name=IY40_RS03225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS03225;old_locus_tag=IY40_03280 NZ_JPQY01000004.1 Protein Homology CDS 29493 30971 . - 0 ID=cds-WP_025303535.1;Parent=gene-IY40_RS03225;Dbxref=GenBank:WP_025303535.1;Name=WP_025303535.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013813770.1;locus_tag=IY40_RS03225;product=amino acid permease;protein_id=WP_025303535.1;transl_table=11 NZ_JPQY01000004.1 RefSeq gene 31190 32056 . - . ID=gene-IY40_RS03230;Name=yieE;gbkey=Gene;gene=yieE;gene_biotype=protein_coding;locus_tag=IY40_RS03230;old_locus_tag=IY40_03285 NZ_JPQY01000004.1 Protein Homology CDS 31190 32056 . - 0 ID=cds-WP_025303536.1;Parent=gene-IY40_RS03230;Dbxref=GenBank:WP_025303536.1;Name=WP_025303536.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=yieE;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015378518.1;locus_tag=IY40_RS03230;product=DNA-binding transcriptional regulator YeiE;protein_id=WP_025303536.1;transl_table=11 NZ_JPQY01000004.1 RefSeq gene 32154 32351 . - . ID=gene-IY40_RS03235;Name=IY40_RS03235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS03235;old_locus_tag=IY40_03290 NZ_JPQY01000004.1 Protein Homology CDS 32154 32351 . - 0 ID=cds-WP_043136401.1;Parent=gene-IY40_RS03235;Dbxref=GenBank:WP_043136401.1;Name=WP_043136401.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016926990.1;locus_tag=IY40_RS03235;product=hypothetical protein;protein_id=WP_043136401.1;transl_table=11 NZ_JPQY01000004.1 RefSeq gene 32544 33617 . + . ID=gene-IY40_RS03240;Name=IY40_RS03240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS03240;old_locus_tag=IY40_03295 NZ_JPQY01000004.1 Protein Homology CDS 32544 33617 . + 0 ID=cds-WP_043136403.1;Parent=gene-IY40_RS03240;Dbxref=GenBank:WP_043136403.1;Name=WP_043136403.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016926989.1;locus_tag=IY40_RS03240;product=YeiH family putative sulfate export transporter;protein_id=WP_043136403.1;transl_table=11 NZ_JPQY01000004.1 RefSeq gene 33716 34555 . + . ID=gene-IY40_RS03245;Name=nfo;gbkey=Gene;gene=nfo;gene_biotype=protein_coding;locus_tag=IY40_RS03245;old_locus_tag=IY40_03300 NZ_JPQY01000004.1 Protein Homology CDS 33716 34555 . + 0 ID=cds-WP_043136405.1;Parent=gene-IY40_RS03245;Dbxref=GenBank:WP_043136405.1;Name=WP_043136405.1;Ontology_term=GO:0006281,GO:0003677,GO:0008270;gbkey=CDS;gene=nfo;go_function=DNA binding|0003677||IEA,zinc ion binding|0008270||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016926988.1;locus_tag=IY40_RS03245;product=deoxyribonuclease IV;protein_id=WP_043136405.1;transl_table=11 NZ_JPQY01000004.1 RefSeq gene 34575 35168 . - . ID=gene-IY40_RS03250;Name=IY40_RS03250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS03250;old_locus_tag=IY40_03305 NZ_JPQY01000004.1 Protein Homology CDS 34575 35168 . - 0 ID=cds-WP_080287108.1;Parent=gene-IY40_RS03250;Dbxref=GenBank:WP_080287108.1;Name=WP_080287108.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015378521.1;locus_tag=IY40_RS03250;product=DJ-1/PfpI family protein;protein_id=WP_080287108.1;transl_table=11 NZ_JPQY01000004.1 RefSeq gene 35329 37014 . - . ID=gene-IY40_RS03255;Name=fruA;gbkey=Gene;gene=fruA;gene_biotype=protein_coding;locus_tag=IY40_RS03255;old_locus_tag=IY40_03310 NZ_JPQY01000004.1 Protein Homology CDS 35329 37014 . - 0 ID=cds-WP_043136414.1;Parent=gene-IY40_RS03255;Dbxref=GenBank:WP_043136414.1;Name=WP_043136414.1;Ontology_term=GO:0009401,GO:0008982,GO:0022877;gbkey=CDS;gene=fruA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA,protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity|0022877||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019079940.1;locus_tag=IY40_RS03255;product=PTS fructose transporter subunit IIBC;protein_id=WP_043136414.1;transl_table=11 NZ_JPQY01000004.1 RefSeq gene 37026 37967 . - . ID=gene-IY40_RS03260;Name=fruK;gbkey=Gene;gene=fruK;gene_biotype=protein_coding;locus_tag=IY40_RS03260;old_locus_tag=IY40_03315 NZ_JPQY01000004.1 Protein Homology CDS 37026 37967 . - 0 ID=cds-WP_043136417.1;Parent=gene-IY40_RS03260;Dbxref=GenBank:WP_043136417.1;Name=WP_043136417.1;Ontology_term=GO:0008662,GO:0016773;gbkey=CDS;gene=fruK;go_function=1-phosphofructokinase activity|0008662||IEA,phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004935702.1;locus_tag=IY40_RS03260;product=1-phosphofructokinase;protein_id=WP_043136417.1;transl_table=11 NZ_JPQY01000004.1 RefSeq gene 37964 39097 . - . ID=gene-IY40_RS03265;Name=fruB;gbkey=Gene;gene=fruB;gene_biotype=protein_coding;locus_tag=IY40_RS03265;old_locus_tag=IY40_03320 NZ_JPQY01000004.1 Protein Homology CDS 37964 39097 . - 0 ID=cds-WP_025303543.1;Parent=gene-IY40_RS03265;Dbxref=GenBank:WP_025303543.1;Name=WP_025303543.1;gbkey=CDS;gene=fruB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019079941.1;locus_tag=IY40_RS03265;product=fused PTS fructose transporter subunit IIA/HPr protein;protein_id=WP_025303543.1;transl_table=11 NZ_JPQY01000004.1 RefSeq gene 39345 39767 . + . ID=gene-IY40_RS03270;Name=IY40_RS03270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS03270;old_locus_tag=IY40_03325 NZ_JPQY01000004.1 Protein Homology CDS 39345 39767 . + 0 ID=cds-WP_043136420.1;Parent=gene-IY40_RS03270;Dbxref=GenBank:WP_043136420.1;Name=WP_043136420.1;Ontology_term=GO:0006203,GO:0009132,GO:0042262,GO:0017110,GO:0046872,GO:0047429;gbkey=CDS;go_function=nucleoside diphosphate phosphatase activity|0017110||IEA,metal ion binding|0046872||IEA,nucleoside triphosphate diphosphatase activity|0047429||IEA;go_process=dGTP catabolic process|0006203||IEA,nucleoside diphosphate metabolic process|0009132||IEA,DNA protection|0042262||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004935707.1;locus_tag=IY40_RS03270;product=nucleotide triphosphate diphosphatase NUDT15;protein_id=WP_043136420.1;transl_table=11 NZ_JPQY01000004.1 RefSeq gene 39983 41143 . + . ID=gene-IY40_RS03275;Name=IY40_RS03275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS03275;old_locus_tag=IY40_03330 NZ_JPQY01000004.1 Protein Homology CDS 39983 41143 . + 0 ID=cds-WP_043136424.1;Parent=gene-IY40_RS03275;Dbxref=GenBank:WP_043136424.1;Name=WP_043136424.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013813778.1;locus_tag=IY40_RS03275;product=NapC/NirT family cytochrome c;protein_id=WP_043136424.1;transl_table=11 NZ_JPQY01000004.1 RefSeq gene 41156 43630 . + . ID=gene-IY40_RS03280;Name=torA;gbkey=Gene;gene=torA;gene_biotype=protein_coding;locus_tag=IY40_RS03280;old_locus_tag=IY40_03335 NZ_JPQY01000004.1 Protein Homology CDS 41156 43630 . + 0 ID=cds-WP_025303546.1;Parent=gene-IY40_RS03280;Dbxref=GenBank:WP_025303546.1;Name=WP_025303546.1;Ontology_term=GO:0030151,GO:0043546,GO:0050626,GO:0042597;gbkey=CDS;gene=torA;go_component=periplasmic space|0042597||IEA;go_function=molybdenum ion binding|0030151||IEA,molybdopterin cofactor binding|0043546||IEA,trimethylamine-N-oxide reductase (cytochrome c) activity|0050626||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015378526.1;locus_tag=IY40_RS03280;product=trimethylamine-N-oxide reductase TorA;protein_id=WP_025303546.1;transl_table=11 NZ_JPQY01000004.1 RefSeq gene 43785 44960 . + . ID=gene-IY40_RS03285;Name=IY40_RS03285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS03285;old_locus_tag=IY40_03340 NZ_JPQY01000004.1 Protein Homology CDS 43785 44960 . + 0 ID=cds-WP_043136428.1;Parent=gene-IY40_RS03285;Dbxref=GenBank:WP_043136428.1;Name=WP_043136428.1;Ontology_term=GO:0008643,GO:0005351,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=carbohydrate:proton symporter activity|0005351||IEA;go_process=carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013317622.1;locus_tag=IY40_RS03285;product=sugar efflux transporter;protein_id=WP_043136428.1;transl_table=11 NZ_JPQY01000004.1 RefSeq gene 44957 45211 . - . ID=gene-IY40_RS03290;Name=IY40_RS03290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS03290;old_locus_tag=IY40_03345 NZ_JPQY01000004.1 Protein Homology CDS 44957 45211 . - 0 ID=cds-WP_019453627.1;Parent=gene-IY40_RS03290;Dbxref=GenBank:WP_019453627.1;Name=WP_019453627.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208811.1;locus_tag=IY40_RS03290;product=YkgJ family cysteine cluster protein;protein_id=WP_019453627.1;transl_table=11 NZ_JPQY01000004.1 RefSeq gene 45483 46727 . + . ID=gene-IY40_RS03295;Name=mtr;gbkey=Gene;gene=mtr;gene_biotype=protein_coding;locus_tag=IY40_RS03295;old_locus_tag=IY40_03350 NZ_JPQY01000004.1 Protein Homology CDS 45483 46727 . + 0 ID=cds-WP_025303548.1;Parent=gene-IY40_RS03295;Dbxref=GenBank:WP_025303548.1;Name=WP_025303548.1;Ontology_term=GO:0015801,GO:0015173,GO:0005886;gbkey=CDS;gene=mtr;go_component=plasma membrane|0005886||IEA;go_function=aromatic amino acid transmembrane transporter activity|0015173||IEA;go_process=aromatic amino acid transport|0015801||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004947054.1;locus_tag=IY40_RS03295;product=tryptophan permease;protein_id=WP_025303548.1;transl_table=11 NZ_JPQY01000004.1 RefSeq gene 46854 47426 . + . ID=gene-IY40_RS03300;Name=yeiP;gbkey=Gene;gene=yeiP;gene_biotype=protein_coding;locus_tag=IY40_RS03300;old_locus_tag=IY40_03355 NZ_JPQY01000004.1 Protein Homology CDS 46854 47426 . + 0 ID=cds-WP_004935725.1;Parent=gene-IY40_RS03300;Dbxref=GenBank:WP_004935725.1;Name=WP_004935725.1;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=yeiP;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010277377.1;locus_tag=IY40_RS03300;product=elongation factor P-like protein YeiP;protein_id=WP_004935725.1;transl_table=11 NZ_JPQY01000004.1 RefSeq gene 47469 48659 . - . ID=gene-IY40_RS03305;Name=uxuA;gbkey=Gene;gene=uxuA;gene_biotype=protein_coding;locus_tag=IY40_RS03305;old_locus_tag=IY40_03360 NZ_JPQY01000004.1 Protein Homology CDS 47469 48659 . - 0 ID=cds-WP_025303549.1;Parent=gene-IY40_RS03305;Dbxref=GenBank:WP_025303549.1;Name=WP_025303549.1;Ontology_term=GO:0006064,GO:0008927;gbkey=CDS;gene=uxuA;go_function=mannonate dehydratase activity|0008927||IEA;go_process=glucuronate catabolic process|0006064||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015378529.1;locus_tag=IY40_RS03305;product=mannonate dehydratase;protein_id=WP_025303549.1;transl_table=11 NZ_JPQY01000004.1 RefSeq gene 48953 50425 . + . ID=gene-IY40_RS03310;Name=IY40_RS03310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS03310;old_locus_tag=IY40_03365 NZ_JPQY01000004.1 Protein Homology CDS 48953 50425 . + 0 ID=cds-WP_043136433.1;Parent=gene-IY40_RS03310;Dbxref=GenBank:WP_043136433.1;Name=WP_043136433.1;Ontology_term=GO:0016616;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019453630.1;locus_tag=IY40_RS03310;product=mannitol dehydrogenase family protein;protein_id=WP_043136433.1;transl_table=11 NZ_JPQY01000004.1 RefSeq gene 50487 50795 . - . ID=gene-IY40_RS03315;Name=IY40_RS03315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS03315;old_locus_tag=IY40_03370 NZ_JPQY01000004.1 Protein Homology CDS 50487 50795 . - 0 ID=cds-WP_004935734.1;Parent=gene-IY40_RS03315;Dbxref=GenBank:WP_004935734.1;Name=WP_004935734.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013813785.1;locus_tag=IY40_RS03315;product=type 1 fimbrial protein;protein_id=WP_004935734.1;transl_table=11 NZ_JPQY01000004.1 RefSeq gene 51114 52088 . + . ID=gene-IY40_RS03320;Name=IY40_RS03320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS03320;old_locus_tag=IY40_03375 NZ_JPQY01000004.1 Protein Homology CDS 51114 52088 . + 0 ID=cds-WP_025303551.1;Parent=gene-IY40_RS03320;Dbxref=GenBank:WP_025303551.1;Name=WP_025303551.1;Ontology_term=GO:0003924,GO:0005525,GO:0046872;gbkey=CDS;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019453632.1;locus_tag=IY40_RS03320;product=CobW family GTP-binding protein;protein_id=WP_025303551.1;transl_table=11 NZ_JPQY01000004.1 RefSeq gene 52167 52877 . + . ID=gene-IY40_RS03325;Name=IY40_RS03325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS03325;old_locus_tag=IY40_03380 NZ_JPQY01000004.1 Protein Homology CDS 52167 52877 . + 0 ID=cds-WP_025303552.1;Parent=gene-IY40_RS03325;Dbxref=GenBank:WP_025303552.1;Name=WP_025303552.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004935741.1;locus_tag=IY40_RS03325;product=phosphatase PAP2 family protein;protein_id=WP_025303552.1;transl_table=11 NZ_JPQY01000004.1 RefSeq gene 53288 53863 . + . ID=gene-IY40_RS03330;Name=mepS;gbkey=Gene;gene=mepS;gene_biotype=protein_coding;locus_tag=IY40_RS03330;old_locus_tag=IY40_03385 NZ_JPQY01000004.1 Protein Homology CDS 53288 53863 . + 0 ID=cds-WP_025303553.1;Parent=gene-IY40_RS03330;Dbxref=GenBank:WP_025303553.1;Name=WP_025303553.1;gbkey=CDS;gene=mepS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013574652.1;locus_tag=IY40_RS03330;product=bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase;protein_id=WP_025303553.1;transl_table=11 NZ_JPQY01000004.1 RefSeq gene 54276 55862 . + . ID=gene-IY40_RS03335;Name=IY40_RS03335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS03335;old_locus_tag=IY40_03390 NZ_JPQY01000004.1 Protein Homology CDS 54276 55862 . + 0 ID=cds-WP_025303554.1;Parent=gene-IY40_RS03335;Dbxref=GenBank:WP_025303554.1;Name=WP_025303554.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019453636.1;locus_tag=IY40_RS03335;product=cyclic di-GMP phosphodiesterase;protein_id=WP_025303554.1;transl_table=11 NZ_JPQY01000004.1 RefSeq gene 55952 57760 . + . ID=gene-IY40_RS03340;Name=IY40_RS03340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS03340;old_locus_tag=IY40_03395 NZ_JPQY01000004.1 Protein Homology CDS 55952 57760 . + 0 ID=cds-WP_043136440.1;Parent=gene-IY40_RS03340;Dbxref=GenBank:WP_043136440.1;Name=WP_043136440.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016926974.1;locus_tag=IY40_RS03340;product=extracellular solute-binding protein;protein_id=WP_043136440.1;transl_table=11 NZ_JPQY01000004.1 RefSeq gene 57770 58861 . + . ID=gene-IY40_RS03345;Name=IY40_RS03345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS03345;old_locus_tag=IY40_03400 NZ_JPQY01000004.1 Protein Homology CDS 57770 58861 . + 0 ID=cds-WP_025303556.1;Parent=gene-IY40_RS03345;Dbxref=GenBank:WP_025303556.1;Name=WP_025303556.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019083498.1;locus_tag=IY40_RS03345;product=microcin C ABC transporter permease YejB;protein_id=WP_025303556.1;transl_table=11 NZ_JPQY01000004.1 RefSeq gene 58858 59883 . + . ID=gene-IY40_RS03350;Name=IY40_RS03350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS03350;old_locus_tag=IY40_03405 NZ_JPQY01000004.1 Protein Homology CDS 58858 59883 . + 0 ID=cds-WP_025303557.1;Parent=gene-IY40_RS03350;Dbxref=GenBank:WP_025303557.1;Name=WP_025303557.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002353954.1;locus_tag=IY40_RS03350;product=ABC transporter permease;protein_id=WP_025303557.1;transl_table=11 NZ_JPQY01000004.1 RefSeq gene 59885 61495 . + . ID=gene-IY40_RS03355;Name=yejF;gbkey=Gene;gene=yejF;gene_biotype=protein_coding;locus_tag=IY40_RS03355;old_locus_tag=IY40_03410 NZ_JPQY01000004.1 Protein Homology CDS 59885 61495 . + 0 ID=cds-WP_043136443.1;Parent=gene-IY40_RS03355;Dbxref=GenBank:WP_043136443.1;Name=WP_043136443.1;Ontology_term=GO:0006810,GO:0000166,GO:0005524;gbkey=CDS;gene=yejF;go_function=nucleotide binding|0000166||IEA,ATP binding|0005524||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105426.1;locus_tag=IY40_RS03355;product=microcin C ABC transporter ATP-binding protein YejF;protein_id=WP_043136443.1;transl_table=11 NZ_JPQY01000004.1 RefSeq gene 61504 61848 . - . ID=gene-IY40_RS03360;Name=IY40_RS03360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS03360;old_locus_tag=IY40_03415 NZ_JPQY01000004.1 Protein Homology CDS 61504 61848 . - 0 ID=cds-WP_004935763.1;Parent=gene-IY40_RS03360;Dbxref=GenBank:WP_004935763.1;Name=WP_004935763.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004715524.1;locus_tag=IY40_RS03360;product=YejG family protein;protein_id=WP_004935763.1;transl_table=11 NZ_JPQY01000004.1 RefSeq gene 62443 63639 . - . ID=gene-IY40_RS03365;Name=IY40_RS03365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS03365;old_locus_tag=IY40_03420 NZ_JPQY01000004.1 Protein Homology CDS 62443 63639 . - 0 ID=cds-WP_025303559.1;Parent=gene-IY40_RS03365;Dbxref=GenBank:WP_025303559.1;Name=WP_025303559.1;Ontology_term=GO:0042908,GO:1990961,GO:0042910,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=xenobiotic transmembrane transporter activity|0042910||IEA;go_process=xenobiotic transport|0042908||IEA,xenobiotic detoxification by transmembrane export across the plasma membrane|1990961||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004935766.1;locus_tag=IY40_RS03365;product=Bcr/CflA family multidrug efflux MFS transporter;protein_id=WP_025303559.1;transl_table=11 NZ_JPQY01000004.1 RefSeq gene 63681 64394 . - . ID=gene-IY40_RS03370;Name=rsuA;gbkey=Gene;gene=rsuA;gene_biotype=protein_coding;locus_tag=IY40_RS03370;old_locus_tag=IY40_03425 NZ_JPQY01000004.1 Protein Homology CDS 63681 64394 . - 0 ID=cds-WP_025303560.1;Parent=gene-IY40_RS03370;Dbxref=GenBank:WP_025303560.1;Name=WP_025303560.1;gbkey=CDS;gene=rsuA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004947102.1;locus_tag=IY40_RS03370;product=16S rRNA pseudouridine(516) synthase RsuA;protein_id=WP_025303560.1;transl_table=11 NZ_JPQY01000004.1 RefSeq gene 64713 66470 . + . ID=gene-IY40_RS03375;Name=IY40_RS03375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS03375;old_locus_tag=IY40_03430 NZ_JPQY01000004.1 Protein Homology CDS 64713 66470 . + 0 ID=cds-WP_043136446.1;Parent=gene-IY40_RS03375;Dbxref=GenBank:WP_043136446.1;Name=WP_043136446.1;Ontology_term=GO:0003676,GO:0004386,GO:0005524,GO:0016887;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,helicase activity|0004386||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208833.1;locus_tag=IY40_RS03375;product=DEAD/DEAH box helicase;protein_id=WP_043136446.1;transl_table=11 NZ_JPQY01000004.1 RefSeq gene 66633 66917 . + . ID=gene-IY40_RS03380;Name=rplY;gbkey=Gene;gene=rplY;gene_biotype=protein_coding;locus_tag=IY40_RS03380;old_locus_tag=IY40_03435 NZ_JPQY01000004.1 Protein Homology CDS 66633 66917 . + 0 ID=cds-WP_019453645.1;Parent=gene-IY40_RS03380;Dbxref=GenBank:WP_019453645.1;Name=WP_019453645.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplY;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208834.1;locus_tag=IY40_RS03380;product=50S ribosomal protein L25;protein_id=WP_019453645.1;transl_table=11 NZ_JPQY01000004.1 RefSeq gene 67002 68009 . - . ID=gene-IY40_RS03385;Name=yejK;gbkey=Gene;gene=yejK;gene_biotype=protein_coding;locus_tag=IY40_RS03385;old_locus_tag=IY40_03440 NZ_JPQY01000004.1 Protein Homology CDS 67002 68009 . - 0 ID=cds-WP_025303563.1;Parent=gene-IY40_RS03385;Dbxref=GenBank:WP_025303563.1;Name=WP_025303563.1;Ontology_term=GO:0009295;gbkey=CDS;gene=yejK;go_component=nucleoid|0009295||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016926967.1;locus_tag=IY40_RS03385;product=nucleoid-associated protein YejK;protein_id=WP_025303563.1;transl_table=11 NZ_JPQY01000004.1 RefSeq gene 68220 68447 . + . ID=gene-IY40_RS03390;Name=IY40_RS03390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS03390;old_locus_tag=IY40_03445 NZ_JPQY01000004.1 Protein Homology CDS 68220 68447 . + 0 ID=cds-WP_004935782.1;Parent=gene-IY40_RS03390;Dbxref=GenBank:WP_004935782.1;Name=WP_004935782.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004700534.1;locus_tag=IY40_RS03390;product=YejL family protein;protein_id=WP_004935782.1;transl_table=11 NZ_JPQY01000004.1 RefSeq gene 68457 70238 . + . ID=gene-IY40_RS03395;Name=yejM;gbkey=Gene;gene=yejM;gene_biotype=protein_coding;locus_tag=IY40_RS03395;old_locus_tag=IY40_03450 NZ_JPQY01000004.1 Protein Homology CDS 68457 70238 . + 0 ID=cds-WP_043136449.1;Parent=gene-IY40_RS03395;Dbxref=GenBank:WP_043136449.1;Name=WP_043136449.1;Ontology_term=GO:0008484;gbkey=CDS;gene=yejM;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004935784.1;locus_tag=IY40_RS03395;product=LPS biosynthesis-modulating metalloenzyme YejM;protein_id=WP_043136449.1;transl_table=11 NZ_JPQY01000004.1 RefSeq gene 70317 70393 . + . ID=gene-IY40_RS03400;Name=IY40_RS03400;gbkey=Gene;gene_biotype=tRNA;locus_tag=IY40_RS03400;old_locus_tag=IY40_03455 NZ_JPQY01000004.1 tRNAscan-SE tRNA 70317 70393 . + . ID=rna-IY40_RS03400;Parent=gene-IY40_RS03400;anticodon=(pos:70351..70353);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=IY40_RS03400;product=tRNA-Pro NZ_JPQY01000004.1 tRNAscan-SE exon 70317 70393 . + . ID=exon-IY40_RS03400-1;Parent=rna-IY40_RS03400;anticodon=(pos:70351..70353);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=IY40_RS03400;product=tRNA-Pro NZ_JPQY01000004.1 RefSeq gene 70428 70557 . + . ID=gene-IY40_RS25025;Name=IY40_RS25025;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IY40_RS25025;old_locus_tag=IY40_03710 NZ_JPQY01000004.1 cmsearch ncRNA 70428 70557 . + . ID=rna-IY40_RS25025;Parent=gene-IY40_RS25025;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=IY40_RS25025;product=RtT sRNA NZ_JPQY01000004.1 cmsearch exon 70428 70557 . + . ID=exon-IY40_RS25025-1;Parent=rna-IY40_RS25025;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=IY40_RS25025;product=RtT sRNA NZ_JPQY01000004.1 RefSeq gene 70667 71860 . - . ID=gene-IY40_RS03405;Name=IY40_RS03405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS03405;old_locus_tag=IY40_03460 NZ_JPQY01000004.1 Protein Homology CDS 70667 71860 . - 0 ID=cds-WP_043136451.1;Parent=gene-IY40_RS03405;Dbxref=GenBank:WP_043136451.1;Name=WP_043136451.1;Ontology_term=GO:0071949;gbkey=CDS;go_function=FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461120.1;locus_tag=IY40_RS03405;product=3-hydroxybenzoate 6-monooxygenase;protein_id=WP_043136451.1;transl_table=11 NZ_JPQY01000004.1 RefSeq gene 71880 72524 . - . ID=gene-IY40_RS03410;Name=maiA;gbkey=Gene;gene=maiA;gene_biotype=protein_coding;locus_tag=IY40_RS03410;old_locus_tag=IY40_03465 NZ_JPQY01000004.1 Protein Homology CDS 71880 72524 . - 0 ID=cds-WP_043136544.1;Parent=gene-IY40_RS03410;Dbxref=GenBank:WP_043136544.1;Name=WP_043136544.1;Ontology_term=GO:0006559,GO:0006572,GO:0016034,GO:0005737;gbkey=CDS;gene=maiA;go_component=cytoplasm|0005737||IEA;go_function=maleylacetoacetate isomerase activity|0016034||IEA;go_process=L-phenylalanine catabolic process|0006559||IEA,L-tyrosine catabolic process|0006572||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461121.1;locus_tag=IY40_RS03410;product=maleylacetoacetate isomerase;protein_id=WP_043136544.1;transl_table=11 NZ_JPQY01000004.1 RefSeq gene 72544 73245 . - . ID=gene-IY40_RS03415;Name=IY40_RS03415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS03415;old_locus_tag=IY40_03470 NZ_JPQY01000004.1 Protein Homology CDS 72544 73245 . - 0 ID=cds-WP_025303616.1;Parent=gene-IY40_RS03415;Dbxref=GenBank:WP_025303616.1;Name=WP_025303616.1;Ontology_term=GO:0003824,GO:0016787;gbkey=CDS;go_function=catalytic activity|0003824||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311056.1;locus_tag=IY40_RS03415;product=fumarylacetoacetate hydrolase family protein;protein_id=WP_025303616.1;transl_table=11 NZ_JPQY01000004.1 RefSeq gene 73261 74298 . - . ID=gene-IY40_RS03420;Name=gtdA;gbkey=Gene;gene=gtdA;gene_biotype=protein_coding;locus_tag=IY40_RS03420;old_locus_tag=IY40_03475 NZ_JPQY01000004.1 Protein Homology CDS 73261 74298 . - 0 ID=cds-WP_043136456.1;Parent=gene-IY40_RS03420;Dbxref=GenBank:WP_043136456.1;Name=WP_043136456.1;Ontology_term=GO:0047922;gbkey=CDS;gene=gtdA;go_function=gentisate 1%2C2-dioxygenase activity|0047922||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461123.1;locus_tag=IY40_RS03420;product=gentisate 1%2C2-dioxygenase;protein_id=WP_043136456.1;transl_table=11 NZ_JPQY01000004.1 RefSeq gene 74317 75666 . - . ID=gene-IY40_RS03425;Name=mhbT;gbkey=Gene;gene=mhbT;gene_biotype=protein_coding;locus_tag=IY40_RS03425;old_locus_tag=IY40_03480 NZ_JPQY01000004.1 Protein Homology CDS 74317 75666 . - 0 ID=cds-WP_025303618.1;Parent=gene-IY40_RS03425;Dbxref=GenBank:WP_025303618.1;Name=WP_025303618.1;gbkey=CDS;gene=mhbT;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016926962.1;locus_tag=IY40_RS03425;product=3-hydroxybenzoate transporter MhbT;protein_id=WP_025303618.1;transl_table=11 NZ_JPQY01000004.1 RefSeq gene 75792 76700 . + . ID=gene-IY40_RS03430;Name=IY40_RS03430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS03430;old_locus_tag=IY40_03485 NZ_JPQY01000004.1 Protein Homology CDS 75792 76700 . + 0 ID=cds-WP_043136460.1;Parent=gene-IY40_RS03430;Dbxref=GenBank:WP_043136460.1;Name=WP_043136460.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016926961.1;locus_tag=IY40_RS03430;product=LysR family transcriptional regulator;protein_id=WP_043136460.1;transl_table=11 NZ_JPQY01000004.1 RefSeq gene 76739 79810 . - . ID=gene-IY40_RS03435;Name=ttrA;gbkey=Gene;gene=ttrA;gene_biotype=protein_coding;locus_tag=IY40_RS03435;old_locus_tag=IY40_03490 NZ_JPQY01000004.1 Protein Homology CDS 76739 79810 . - 0 ID=cds-WP_043136464.1;Parent=gene-IY40_RS03435;Dbxref=GenBank:WP_043136464.1;Name=WP_043136464.1;Ontology_term=GO:0016491,GO:0043546;gbkey=CDS;gene=ttrA;go_function=oxidoreductase activity|0016491||IEA,molybdopterin cofactor binding|0043546||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015378543.1;locus_tag=IY40_RS03435;product=tetrathionate reductase subunit TtrA;protein_id=WP_043136464.1;transl_table=11 NZ_JPQY01000004.1 RefSeq gene 79803 80828 . - . ID=gene-IY40_RS03440;Name=ttrC;gbkey=Gene;gene=ttrC;gene_biotype=protein_coding;locus_tag=IY40_RS03440;old_locus_tag=IY40_03495 NZ_JPQY01000004.1 Protein Homology CDS 79803 80828 . - 0 ID=cds-WP_043136468.1;Parent=gene-IY40_RS03440;Dbxref=GenBank:WP_043136468.1;Name=WP_043136468.1;gbkey=CDS;gene=ttrC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017441011.1;locus_tag=IY40_RS03440;product=tetrathionate reductase subunit TtrC;protein_id=WP_043136468.1;transl_table=11 NZ_JPQY01000004.1 RefSeq gene 80825 81562 . - . ID=gene-IY40_RS03445;Name=ttrB;gbkey=Gene;gene=ttrB;gene_biotype=protein_coding;locus_tag=IY40_RS03445;old_locus_tag=IY40_03500 NZ_JPQY01000004.1 Protein Homology CDS 80825 81562 . - 0 ID=cds-WP_043136471.1;Parent=gene-IY40_RS03445;Dbxref=GenBank:WP_043136471.1;Name=WP_043136471.1;gbkey=CDS;gene=ttrB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015378545.1;locus_tag=IY40_RS03445;product=tetrathionate reductase subunit TtrB;protein_id=WP_043136471.1;transl_table=11 NZ_JPQY01000004.1 RefSeq gene 81791 83512 . + . ID=gene-IY40_RS03450;Name=ttrS;gbkey=Gene;gene=ttrS;gene_biotype=protein_coding;locus_tag=IY40_RS03450 NZ_JPQY01000004.1 Protein Homology CDS 81791 83512 . + 0 ID=cds-WP_212637192.1;Parent=gene-IY40_RS03450;Dbxref=GenBank:WP_212637192.1;Name=WP_212637192.1;gbkey=CDS;gene=ttrS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016926957.1;locus_tag=IY40_RS03450;product=tetrathionate respiration histidine kinase TtrS;protein_id=WP_212637192.1;transl_table=11 NZ_JPQY01000004.1 RefSeq gene 83484 84083 . + . ID=gene-IY40_RS03455;Name=ttrR;gbkey=Gene;gene=ttrR;gene_biotype=protein_coding;locus_tag=IY40_RS03455;old_locus_tag=IY40_03510 NZ_JPQY01000004.1 Protein Homology CDS 83484 84083 . + 0 ID=cds-WP_043136478.1;Parent=gene-IY40_RS03455;Dbxref=GenBank:WP_043136478.1;Name=WP_043136478.1;gbkey=CDS;gene=ttrR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004935800.1;locus_tag=IY40_RS03455;product=tetrathionate respiration response regulator TtrR;protein_id=WP_043136478.1;transl_table=11 NZ_JPQY01000004.1 RefSeq gene 84424 85086 . + . ID=gene-IY40_RS03460;Name=IY40_RS03460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS03460;old_locus_tag=IY40_03515 NZ_JPQY01000004.1 Protein Homology CDS 84424 85086 . + 0 ID=cds-WP_043136482.1;Parent=gene-IY40_RS03460;Dbxref=GenBank:WP_043136482.1;Name=WP_043136482.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012987515.1;locus_tag=IY40_RS03460;product=VUT family protein;protein_id=WP_043136482.1;transl_table=11 NZ_JPQY01000004.1 RefSeq gene 85104 85835 . + . ID=gene-IY40_RS03465;Name=IY40_RS03465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS03465;old_locus_tag=IY40_03520 NZ_JPQY01000004.1 Protein Homology CDS 85104 85835 . + 0 ID=cds-WP_043136485.1;Parent=gene-IY40_RS03465;Dbxref=GenBank:WP_043136485.1;Name=WP_043136485.1;Ontology_term=GO:0016787,GO:0042578,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,phosphoric ester hydrolase activity|0042578||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: protein motif:HMM:NF024258.6;locus_tag=IY40_RS03465;product=metallophosphoesterase family protein;protein_id=WP_043136485.1;transl_table=11 NZ_JPQY01000004.1 RefSeq gene 85828 86316 . - . ID=gene-IY40_RS03470;Name=IY40_RS03470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS03470;old_locus_tag=IY40_03525 NZ_JPQY01000004.1 GeneMarkS-2+ CDS 85828 86316 . - 0 ID=cds-WP_043136490.1;Parent=gene-IY40_RS03470;Dbxref=GenBank:WP_043136490.1;Name=WP_043136490.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IY40_RS03470;product=ATP synthase subunit B family protein;protein_id=WP_043136490.1;transl_table=11 NZ_JPQY01000004.1 RefSeq gene 86317 86970 . - . ID=gene-IY40_RS03475;Name=IY40_RS03475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS03475;old_locus_tag=IY40_03530 NZ_JPQY01000004.1 Protein Homology CDS 86317 86970 . - 0 ID=cds-WP_043136493.1;Parent=gene-IY40_RS03475;Dbxref=GenBank:WP_043136493.1;Name=WP_043136493.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012920.6;locus_tag=IY40_RS03475;product=helix-turn-helix domain-containing protein;protein_id=WP_043136493.1;transl_table=11 NZ_JPQY01000004.1 RefSeq gene 87842 88084 . + . ID=gene-IY40_RS03480;Name=IY40_RS03480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS03480;old_locus_tag=IY40_03535 NZ_JPQY01000004.1 Protein Homology CDS 87842 88084 . + 0 ID=cds-WP_025303629.1;Parent=gene-IY40_RS03480;Dbxref=GenBank:WP_025303629.1;Name=WP_025303629.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019453660.1;locus_tag=IY40_RS03480;product=DinI family protein;protein_id=WP_025303629.1;transl_table=11 NZ_JPQY01000004.1 RefSeq gene 88310 88385 . - . ID=gene-IY40_RS03485;Name=IY40_RS03485;gbkey=Gene;gene_biotype=tRNA;locus_tag=IY40_RS03485;old_locus_tag=IY40_03540 NZ_JPQY01000004.1 tRNAscan-SE tRNA 88310 88385 . - . ID=rna-IY40_RS03485;Parent=gene-IY40_RS03485;anticodon=(pos:complement(88350..88352));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=IY40_RS03485;product=tRNA-Thr NZ_JPQY01000004.1 tRNAscan-SE exon 88310 88385 . - . ID=exon-IY40_RS03485-1;Parent=rna-IY40_RS03485;anticodon=(pos:complement(88350..88352));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=IY40_RS03485;product=tRNA-Thr NZ_JPQY01000004.1 RefSeq gene 88392 88479 . - . ID=gene-IY40_RS03490;Name=IY40_RS03490;gbkey=Gene;gene_biotype=tRNA;locus_tag=IY40_RS03490;old_locus_tag=IY40_03545 NZ_JPQY01000004.1 tRNAscan-SE tRNA 88392 88479 . - . ID=rna-IY40_RS03490;Parent=gene-IY40_RS03490;anticodon=(pos:complement(88443..88445));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=IY40_RS03490;product=tRNA-Ser NZ_JPQY01000004.1 tRNAscan-SE exon 88392 88479 . - . ID=exon-IY40_RS03490-1;Parent=rna-IY40_RS03490;anticodon=(pos:complement(88443..88445));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=IY40_RS03490;product=tRNA-Ser NZ_JPQY01000004.1 RefSeq gene 88637 88966 . - . ID=gene-IY40_RS03495;Name=osmE;gbkey=Gene;gene=osmE;gene_biotype=protein_coding;locus_tag=IY40_RS03495;old_locus_tag=IY40_03550 NZ_JPQY01000004.1 Protein Homology CDS 88637 88966 . - 0 ID=cds-WP_025303630.1;Parent=gene-IY40_RS03495;Dbxref=GenBank:WP_025303630.1;Name=WP_025303630.1;Ontology_term=GO:0019867;gbkey=CDS;gene=osmE;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017893458.1;locus_tag=IY40_RS03495;product=osmotically-inducible lipoprotein OsmE;protein_id=WP_025303630.1;transl_table=11 NZ_JPQY01000004.1 RefSeq gene 89094 89561 . - . ID=gene-IY40_RS03500;Name=IY40_RS03500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS03500;old_locus_tag=IY40_03555 NZ_JPQY01000004.1 Protein Homology CDS 89094 89561 . - 0 ID=cds-WP_025303631.1;Parent=gene-IY40_RS03500;Dbxref=GenBank:WP_025303631.1;Name=WP_025303631.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019453682.1;locus_tag=IY40_RS03500;product=nuclear transport factor 2 family protein;protein_id=WP_025303631.1;transl_table=11 NZ_JPQY01000004.1 RefSeq gene 89669 90247 . + . ID=gene-IY40_RS03505;Name=IY40_RS03505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS03505;old_locus_tag=IY40_03560 NZ_JPQY01000004.1 Protein Homology CDS 89669 90247 . + 0 ID=cds-WP_043136496.1;Parent=gene-IY40_RS03505;Dbxref=GenBank:WP_043136496.1;Name=WP_043136496.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004935885.1;locus_tag=IY40_RS03505;product=TetR/AcrR family transcriptional regulator;protein_id=WP_043136496.1;transl_table=11 NZ_JPQY01000004.1 RefSeq gene 90241 90657 . - . ID=gene-IY40_RS03510;Name=IY40_RS03510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS03510;old_locus_tag=IY40_03565 NZ_JPQY01000004.1 Protein Homology CDS 90241 90657 . - 0 ID=cds-WP_025303633.1;Parent=gene-IY40_RS03510;Dbxref=GenBank:WP_025303633.1;Name=WP_025303633.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004935886.1;locus_tag=IY40_RS03510;product=VOC family protein;protein_id=WP_025303633.1;transl_table=11 NZ_JPQY01000004.1 RefSeq gene 90816 91946 . - . ID=gene-IY40_RS03515;Name=ompC;gbkey=Gene;gene=ompC;gene_biotype=protein_coding;locus_tag=IY40_RS03515;old_locus_tag=IY40_03570 NZ_JPQY01000004.1 Protein Homology CDS 90816 91946 . - 0 ID=cds-WP_025303634.1;Parent=gene-IY40_RS03515;Dbxref=GenBank:WP_025303634.1;Name=WP_025303634.1;Ontology_term=GO:0034220,GO:0015288;gbkey=CDS;gene=ompC;go_function=porin activity|0015288||IEA;go_process=monoatomic ion transmembrane transport|0034220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005171545.1;locus_tag=IY40_RS03515;product=porin OmpC;protein_id=WP_025303634.1;transl_table=11 NZ_JPQY01000004.1 RefSeq gene 92649 93056 . + . ID=gene-IY40_RS03520;Name=IY40_RS03520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS03520;old_locus_tag=IY40_03575 NZ_JPQY01000004.1 Protein Homology CDS 92649 93056 . + 0 ID=cds-WP_089180481.1;Parent=gene-IY40_RS03520;Dbxref=GenBank:WP_089180481.1;Name=WP_089180481.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015378553.1;locus_tag=IY40_RS03520;product=DUF4186 domain-containing protein;protein_id=WP_089180481.1;transl_table=11 NZ_JPQY01000004.1 RefSeq gene 93111 94265 . + . ID=gene-IY40_RS03525;Name=IY40_RS03525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS03525;old_locus_tag=IY40_03580 NZ_JPQY01000004.1 Protein Homology CDS 93111 94265 . + 0 ID=cds-WP_043136500.1;Parent=gene-IY40_RS03525;Dbxref=GenBank:WP_043136500.1;Name=WP_043136500.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004389435.1;locus_tag=IY40_RS03525;product=MFS transporter;protein_id=WP_043136500.1;transl_table=11 NZ_JPQY01000004.1 RefSeq gene 94286 96988 . + . ID=gene-IY40_RS03530;Name=rcsD;gbkey=Gene;gene=rcsD;gene_biotype=protein_coding;locus_tag=IY40_RS03530;old_locus_tag=IY40_03585 NZ_JPQY01000004.1 Protein Homology CDS 94286 96988 . + 0 ID=cds-WP_043136503.1;Parent=gene-IY40_RS03530;Dbxref=GenBank:WP_043136503.1;Name=WP_043136503.1;Ontology_term=GO:0000160,GO:0009927,GO:0005886;gbkey=CDS;gene=rcsD;go_component=plasma membrane|0005886||IEA;go_function=histidine phosphotransfer kinase activity|0009927||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019453688.1;locus_tag=IY40_RS03530;product=phosphotransferase RcsD;protein_id=WP_043136503.1;transl_table=11 NZ_JPQY01000004.1 RefSeq gene 96981 97631 . + . ID=gene-IY40_RS03535;Name=rcsB;gbkey=Gene;gene=rcsB;gene_biotype=protein_coding;locus_tag=IY40_RS03535;old_locus_tag=IY40_03590 NZ_JPQY01000004.1 Protein Homology CDS 96981 97631 . + 0 ID=cds-WP_004935900.1;Parent=gene-IY40_RS03535;Dbxref=GenBank:WP_004935900.1;Name=WP_004935900.1;gbkey=CDS;gene=rcsB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019453689.1;locus_tag=IY40_RS03535;product=response regulator transcription factor RcsB;protein_id=WP_004935900.1;transl_table=11 NZ_JPQY01000004.1 RefSeq gene 97693 100554 . - . ID=gene-IY40_RS03540;Name=rcsC;gbkey=Gene;gene=rcsC;gene_biotype=protein_coding;locus_tag=IY40_RS03540;old_locus_tag=IY40_03595 NZ_JPQY01000004.1 Protein Homology CDS 97693 100554 . - 0 ID=cds-WP_025303638.1;Parent=gene-IY40_RS03540;Dbxref=GenBank:WP_025303638.1;Name=WP_025303638.1;Ontology_term=GO:0000160,GO:0006355,GO:0018106,GO:0000155,GO:0005524,GO:0016020;gbkey=CDS;gene=rcsC;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,ATP binding|0005524||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA,peptidyl-histidine phosphorylation|0018106||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006326776.1;locus_tag=IY40_RS03540;product=two-component system sensor histidine kinase RcsC;protein_id=WP_025303638.1;transl_table=11 NZ_JPQY01000004.1 RefSeq gene 100722 103364 . - . ID=gene-IY40_RS03545;Name=gyrA;gbkey=Gene;gene=gyrA;gene_biotype=protein_coding;locus_tag=IY40_RS03545;old_locus_tag=IY40_03600 NZ_JPQY01000004.1 Protein Homology CDS 100722 103364 . - 0 ID=cds-WP_043136507.1;Parent=gene-IY40_RS03545;Dbxref=GenBank:WP_043136507.1;Name=WP_043136507.1;Ontology_term=GO:0006265,GO:0003916,GO:0003918,GO:0009330;gbkey=CDS;gene=gyrA;go_component=DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) complex|0009330||IEA;go_function=DNA topoisomerase activity|0003916||IEA,DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004708706.1;locus_tag=IY40_RS03545;product=DNA topoisomerase (ATP-hydrolyzing) subunit A;protein_id=WP_043136507.1;transl_table=11 NZ_JPQY01000004.1 RefSeq gene 103577 104302 . + . ID=gene-IY40_RS03550;Name=ubiG;gbkey=Gene;gene=ubiG;gene_biotype=protein_coding;locus_tag=IY40_RS03550;old_locus_tag=IY40_03605 NZ_JPQY01000004.1 Protein Homology CDS 103577 104302 . + 0 ID=cds-WP_043136511.1;Parent=gene-IY40_RS03550;Dbxref=GenBank:WP_043136511.1;Name=WP_043136511.1;Ontology_term=GO:0006744,GO:0061542;gbkey=CDS;gene=ubiG;go_function=3-demethylubiquinol 3-O-methyltransferase activity|0061542||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019453692.1;locus_tag=IY40_RS03550;product=bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG;protein_id=WP_043136511.1;transl_table=11 NZ_JPQY01000004.1 RefSeq gene 104741 107029 . + . ID=gene-IY40_RS03555;Name=nrdA;gbkey=Gene;gene=nrdA;gene_biotype=protein_coding;locus_tag=IY40_RS03555;old_locus_tag=IY40_03610 NZ_JPQY01000004.1 Protein Homology CDS 104741 107029 . + 0 ID=cds-WP_025303641.1;Parent=gene-IY40_RS03555;Dbxref=GenBank:WP_025303641.1;Name=WP_025303641.1;Ontology_term=GO:0006260,GO:0004748,GO:0005524;gbkey=CDS;gene=nrdA;go_function=ribonucleoside-diphosphate reductase activity%2C thioredoxin disulfide as acceptor|0004748||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311144.1;locus_tag=IY40_RS03555;product=class 1a ribonucleoside-diphosphate reductase subunit alpha;protein_id=WP_025303641.1;transl_table=11 NZ_JPQY01000004.1 RefSeq gene 107097 108227 . + . ID=gene-IY40_RS03560;Name=nrdB;gbkey=Gene;gene=nrdB;gene_biotype=protein_coding;locus_tag=IY40_RS03560;old_locus_tag=IY40_03615 NZ_JPQY01000004.1 Protein Homology CDS 107097 108227 . + 0 ID=cds-WP_019453694.1;Parent=gene-IY40_RS03560;Dbxref=GenBank:WP_019453694.1;Name=WP_019453694.1;Ontology_term=GO:0009263,GO:0016491;gbkey=CDS;gene=nrdB;go_function=oxidoreductase activity|0016491||IEA;go_process=deoxyribonucleotide biosynthetic process|0009263||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228009.1;locus_tag=IY40_RS03560;product=class Ia ribonucleoside-diphosphate reductase subunit beta;protein_id=WP_019453694.1;transl_table=11 NZ_JPQY01000004.1 RefSeq gene 108231 108491 . + . ID=gene-IY40_RS03565;Name=yfaE;gbkey=Gene;gene=yfaE;gene_biotype=protein_coding;locus_tag=IY40_RS03565;old_locus_tag=IY40_03620 NZ_JPQY01000004.1 Protein Homology CDS 108231 108491 . + 0 ID=cds-WP_025303642.1;Parent=gene-IY40_RS03565;Dbxref=GenBank:WP_025303642.1;Name=WP_025303642.1;Ontology_term=GO:0051537;gbkey=CDS;gene=yfaE;go_function=2 iron%2C 2 sulfur cluster binding|0051537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013813864.1;locus_tag=IY40_RS03565;product=class I ribonucleotide reductase maintenance protein YfaE;protein_id=WP_025303642.1;transl_table=11 NZ_JPQY01000004.1 RefSeq gene 108551 108703 . - . ID=gene-IY40_RS26615;Name=IY40_RS26615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS26615;old_locus_tag=IY40_03625 NZ_JPQY01000004.1 Protein Homology CDS 108551 108703 . - 0 ID=cds-WP_004935921.1;Parent=gene-IY40_RS26615;Dbxref=GenBank:WP_004935921.1;Name=WP_004935921.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006317937.1;locus_tag=IY40_RS26615;product=Hok/Gef family protein;protein_id=WP_004935921.1;transl_table=11 NZ_JPQY01000004.1 RefSeq gene 108934 109755 . - . ID=gene-IY40_RS03575;Name=IY40_RS03575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS03575;old_locus_tag=IY40_03630 NZ_JPQY01000004.1 Protein Homology CDS 108934 109755 . - 0 ID=cds-WP_043136550.1;Parent=gene-IY40_RS03575;Dbxref=GenBank:WP_043136550.1;Name=WP_043136550.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019453696.1;locus_tag=IY40_RS03575;product=AraC family transcriptional regulator;protein_id=WP_043136550.1;transl_table=11 NZ_JPQY01000004.1 RefSeq gene 109872 111080 . + . ID=gene-IY40_RS03580;Name=IY40_RS03580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS03580;old_locus_tag=IY40_03635 NZ_JPQY01000004.1 Protein Homology CDS 109872 111080 . + 0 ID=cds-WP_230203399.1;Parent=gene-IY40_RS03580;Dbxref=GenBank:WP_230203399.1;Name=WP_230203399.1;Ontology_term=GO:0016491,GO:0071949;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004935927.1;locus_tag=IY40_RS03580;product=FAD-dependent oxidoreductase;protein_id=WP_230203399.1;transl_table=11 NZ_JPQY01000004.1 RefSeq gene 111084 112280 . - . ID=gene-IY40_RS03585;Name=IY40_RS03585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS03585;old_locus_tag=IY40_03640 NZ_JPQY01000004.1 Protein Homology CDS 111084 112280 . - 0 ID=cds-WP_043136517.1;Parent=gene-IY40_RS03585;Dbxref=GenBank:WP_043136517.1;Name=WP_043136517.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013813866.1;locus_tag=IY40_RS03585;product=nicotinamide mononucleotide deamidase-related protein YfaY;protein_id=WP_043136517.1;transl_table=11 NZ_JPQY01000004.1 RefSeq gene 112526 113734 . + . ID=gene-IY40_RS03590;Name=tyrP;gbkey=Gene;gene=tyrP;gene_biotype=protein_coding;locus_tag=IY40_RS03590;old_locus_tag=IY40_03645 NZ_JPQY01000004.1 Protein Homology CDS 112526 113734 . + 0 ID=cds-WP_004935940.1;Parent=gene-IY40_RS03590;Dbxref=GenBank:WP_004935940.1;Name=WP_004935940.1;Ontology_term=GO:0015801,GO:0015173,GO:0005886;gbkey=CDS;gene=tyrP;go_component=plasma membrane|0005886||IEA;go_function=aromatic amino acid transmembrane transporter activity|0015173||IEA;go_process=aromatic amino acid transport|0015801||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002221775.1;locus_tag=IY40_RS03590;product=tyrosine transporter TyrP;protein_id=WP_004935940.1;transl_table=11 NZ_JPQY01000004.1 RefSeq gene 113796 114335 . - . ID=gene-IY40_RS03595;Name=IY40_RS03595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS03595;old_locus_tag=IY40_03650 NZ_JPQY01000004.1 Protein Homology CDS 113796 114335 . - 0 ID=cds-WP_038876374.1;Parent=gene-IY40_RS03595;Dbxref=GenBank:WP_038876374.1;Name=WP_038876374.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210812.1;locus_tag=IY40_RS03595;product=YfaZ family outer membrane protein;protein_id=WP_038876374.1;transl_table=11 NZ_JPQY01000004.1 RefSeq gene 114674 116110 . + . ID=gene-IY40_RS03600;Name=katA;gbkey=Gene;gene=katA;gene_biotype=protein_coding;locus_tag=IY40_RS03600;old_locus_tag=IY40_03655 NZ_JPQY01000004.1 Protein Homology CDS 114674 116110 . + 0 ID=cds-WP_043136519.1;Parent=gene-IY40_RS03600;Dbxref=GenBank:WP_043136519.1;Name=WP_043136519.1;gbkey=CDS;gene=katA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015378563.1;locus_tag=IY40_RS03600;product=catalase KatA;protein_id=WP_043136519.1;transl_table=11 NZ_JPQY01000004.1 RefSeq gene 116154 117539 . - . ID=gene-IY40_RS03605;Name=menE;gbkey=Gene;gene=menE;gene_biotype=protein_coding;locus_tag=IY40_RS03605;old_locus_tag=IY40_03660 NZ_JPQY01000004.1 Protein Homology CDS 116154 117539 . - 0 ID=cds-WP_043136524.1;Parent=gene-IY40_RS03605;Dbxref=GenBank:WP_043136524.1;Name=WP_043136524.1;Ontology_term=GO:0009234,GO:0005524,GO:0008756;gbkey=CDS;gene=menE;go_function=ATP binding|0005524||IEA,o-succinylbenzoate-CoA ligase activity|0008756||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013813870.1;locus_tag=IY40_RS03605;product=o-succinylbenzoate--CoA ligase;protein_id=WP_043136524.1;transl_table=11 NZ_JPQY01000004.1 RefSeq gene 117527 118510 . - . ID=gene-IY40_RS03610;Name=menC;gbkey=Gene;gene=menC;gene_biotype=protein_coding;locus_tag=IY40_RS03610;old_locus_tag=IY40_03665 NZ_JPQY01000004.1 Protein Homology CDS 117527 118510 . - 0 ID=cds-WP_043136527.1;Parent=gene-IY40_RS03610;Dbxref=GenBank:WP_043136527.1;Name=WP_043136527.1;Ontology_term=GO:0009234,GO:0000287,GO:0016836;gbkey=CDS;gene=menC;go_function=magnesium ion binding|0000287||IEA,hydro-lyase activity|0016836||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015378565.1;locus_tag=IY40_RS03610;product=o-succinylbenzoate synthase;protein_id=WP_043136527.1;transl_table=11 NZ_JPQY01000004.1 RefSeq gene 118510 119367 . - . ID=gene-IY40_RS03615;Name=menB;gbkey=Gene;gene=menB;gene_biotype=protein_coding;locus_tag=IY40_RS03615;old_locus_tag=IY40_03670 NZ_JPQY01000004.1 Protein Homology CDS 118510 119367 . - 0 ID=cds-WP_043136531.1;Parent=gene-IY40_RS03615;Dbxref=GenBank:WP_043136531.1;Name=WP_043136531.1;Ontology_term=GO:0009234,GO:0008935;gbkey=CDS;gene=menB;go_function=1%2C4-dihydroxy-2-naphthoyl-CoA synthase activity|0008935||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001641973.1;locus_tag=IY40_RS03615;product=1%2C4-dihydroxy-2-naphthoyl-CoA synthase;protein_id=WP_043136531.1;transl_table=11 NZ_JPQY01000004.1 RefSeq gene 119379 120149 . - . ID=gene-IY40_RS03620;Name=menH;gbkey=Gene;gene=menH;gene_biotype=protein_coding;locus_tag=IY40_RS03620;old_locus_tag=IY40_03675 NZ_JPQY01000004.1 Protein Homology CDS 119379 120149 . - 0 ID=cds-WP_043136534.1;Parent=gene-IY40_RS03620;Dbxref=GenBank:WP_043136534.1;Name=WP_043136534.1;Ontology_term=GO:0009234,GO:0070205;gbkey=CDS;gene=menH;go_function=2-succinyl-6-hydroxy-2%2C4-cyclohexadiene-1-carboxylate synthase activity|0070205||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016926919.1;locus_tag=IY40_RS03620;product=2-succinyl-6-hydroxy-2%2C4-cyclohexadiene-1-carboxylate synthase;protein_id=WP_043136534.1;transl_table=11 NZ_JPQY01000004.1 RefSeq gene 120146 121822 . - . ID=gene-IY40_RS03625;Name=menD;gbkey=Gene;gene=menD;gene_biotype=protein_coding;locus_tag=IY40_RS03625;old_locus_tag=IY40_03680 NZ_JPQY01000004.1 Protein Homology CDS 120146 121822 . - 0 ID=cds-WP_025303652.1;Parent=gene-IY40_RS03625;Dbxref=GenBank:WP_025303652.1;Name=WP_025303652.1;Ontology_term=GO:0009234,GO:0030976,GO:0070204;gbkey=CDS;gene=menD;go_function=thiamine pyrophosphate binding|0030976||IEA,2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase activity|0070204||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013813874.1;locus_tag=IY40_RS03625;product=2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase;protein_id=WP_025303652.1;transl_table=11 NZ_JPQY01000004.1 RefSeq gene 122203 122514 . - . ID=gene-IY40_RS03630;Name=elaB;gbkey=Gene;gene=elaB;gene_biotype=protein_coding;locus_tag=IY40_RS03630;old_locus_tag=IY40_03685 NZ_JPQY01000004.1 Protein Homology CDS 122203 122514 . - 0 ID=cds-WP_025303653.1;Parent=gene-IY40_RS03630;Dbxref=GenBank:WP_025303653.1;Name=WP_025303653.1;gbkey=CDS;gene=elaB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013813877.1;locus_tag=IY40_RS03630;product=stress response protein ElaB;protein_id=WP_025303653.1;transl_table=11 NZ_JPQY01000004.1 RefSeq gene 122596 123627 . - . ID=gene-IY40_RS03635;Name=idnD;gbkey=Gene;gene=idnD;gene_biotype=protein_coding;locus_tag=IY40_RS03635;old_locus_tag=IY40_03690 NZ_JPQY01000004.1 Protein Homology CDS 122596 123627 . - 0 ID=cds-WP_043136539.1;Parent=gene-IY40_RS03635;Dbxref=GenBank:WP_043136539.1;Name=WP_043136539.1;gbkey=CDS;gene=idnD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019453710.1;locus_tag=IY40_RS03635;product=L-idonate 5-dehydrogenase;protein_id=WP_043136539.1;transl_table=11 NZ_JPQY01000004.1 RefSeq gene 123650 124414 . - . ID=gene-IY40_RS03640;Name=idnO;gbkey=Gene;gene=idnO;gene_biotype=protein_coding;locus_tag=IY40_RS03640;old_locus_tag=IY40_03695 NZ_JPQY01000004.1 Protein Homology CDS 123650 124414 . - 0 ID=cds-WP_025303655.1;Parent=gene-IY40_RS03640;Dbxref=GenBank:WP_025303655.1;Name=WP_025303655.1;gbkey=CDS;gene=idnO;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019083539.1;locus_tag=IY40_RS03640;product=gluconate 5-dehydrogenase;protein_id=WP_025303655.1;transl_table=11 NZ_JPQY01000004.1 RefSeq gene 124654 125163 . - . ID=gene-IY40_RS03645;Name=IY40_RS03645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS03645;old_locus_tag=IY40_03700 NZ_JPQY01000004.1 Protein Homology CDS 124654 125163 . - 0 ID=cds-WP_025303656.1;Parent=gene-IY40_RS03645;Dbxref=GenBank:WP_025303656.1;Name=WP_025303656.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013813880.1;locus_tag=IY40_RS03645;product=DUF1097 domain-containing protein;protein_id=WP_025303656.1;transl_table=11 NZ_JPQY01000004.1 RefSeq pseudogene 125294 125903 . - . ID=gene-IY40_RS03650;Name=IY40_RS03650;end_range=125903,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IY40_RS03650;old_locus_tag=IY40_03705;partial=true;pseudo=true NZ_JPQY01000004.1 Protein Homology CDS 125294 125903 . - 1 ID=cds-IY40_RS03650;Parent=gene-IY40_RS03650;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=125903,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004960576.1;locus_tag=IY40_RS03650;partial=true;product=MFS transporter;pseudo=true;transl_table=11 ##sequence-region NZ_JPQY01000005.1 1 326804 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=615 NZ_JPQY01000005.1 RefSeq region 1 326804 . + . ID=NZ_JPQY01000005.1:1..326804;Dbxref=taxon:615;collected-by=Mahloro H. Serepa%3B Vincent M. Gray;collection-date=2013-04-11;country=South Africa: North West Province;gbkey=Src;genome=genomic;identified-by=Mahloro H. Serepa%3B Vincent M. Gray;isolation-source=entomopathogenic nematode Oscheius sp. MCB living in soil;mol_type=genomic DNA;nat-host=Oscheius sp. MCB;strain=MCB NZ_JPQY01000005.1 RefSeq gene 338 1741 . + . ID=gene-IY40_RS03660;Name=chiP;gbkey=Gene;gene=chiP;gene_biotype=protein_coding;locus_tag=IY40_RS03660;old_locus_tag=IY40_03715 NZ_JPQY01000005.1 Protein Homology CDS 338 1741 . + 0 ID=cds-WP_025301859.1;Parent=gene-IY40_RS03660;Dbxref=GenBank:WP_025301859.1;Name=WP_025301859.1;Ontology_term=GO:0015774,GO:0052778,GO:0015288;gbkey=CDS;gene=chiP;go_function=porin activity|0015288||IEA;go_process=polysaccharide transport|0015774||IEA,diacetylchitobiose metabolic process|0052778||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015376954.1;locus_tag=IY40_RS03660;product=chitoporin ChiP;protein_id=WP_025301859.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 1787 2113 . + . ID=gene-IY40_RS03665;Name=chiQ;gbkey=Gene;gene=chiQ;gene_biotype=protein_coding;locus_tag=IY40_RS03665;old_locus_tag=IY40_03720 NZ_JPQY01000005.1 Protein Homology CDS 1787 2113 . + 0 ID=cds-WP_025301860.1;Parent=gene-IY40_RS03665;Dbxref=GenBank:WP_025301860.1;Name=WP_025301860.1;gbkey=CDS;gene=chiQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012005668.1;locus_tag=IY40_RS03665;product=ChiQ/YbfN family lipoprotein;protein_id=WP_025301860.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 2127 4784 . + . ID=gene-IY40_RS03670;Name=IY40_RS03670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS03670;old_locus_tag=IY40_03725 NZ_JPQY01000005.1 Protein Homology CDS 2127 4784 . + 0 ID=cds-WP_043136567.1;Parent=gene-IY40_RS03670;Dbxref=GenBank:WP_043136567.1;Name=WP_043136567.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017891926.1;locus_tag=IY40_RS03670;product=beta-N-acetylhexosaminidase;protein_id=WP_043136567.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 5031 5477 . - . ID=gene-IY40_RS03675;Name=fur;gbkey=Gene;gene=fur;gene_biotype=protein_coding;locus_tag=IY40_RS03675;old_locus_tag=IY40_03730 NZ_JPQY01000005.1 Protein Homology CDS 5031 5477 . - 0 ID=cds-WP_019454058.1;Parent=gene-IY40_RS03675;Dbxref=GenBank:WP_019454058.1;Name=WP_019454058.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=fur;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019454058.1;locus_tag=IY40_RS03675;product=ferric iron uptake transcriptional regulator;protein_id=WP_019454058.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 5807 6346 . - . ID=gene-IY40_RS03680;Name=fldA;gbkey=Gene;gene=fldA;gene_biotype=protein_coding;locus_tag=IY40_RS03680;old_locus_tag=IY40_03735 NZ_JPQY01000005.1 Protein Homology CDS 5807 6346 . - 0 ID=cds-WP_025301862.1;Parent=gene-IY40_RS03680;Dbxref=GenBank:WP_025301862.1;Name=WP_025301862.1;gbkey=CDS;gene=fldA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002215386.1;locus_tag=IY40_RS03680;product=flavodoxin FldA;protein_id=WP_025301862.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 6611 6898 . - . ID=gene-IY40_RS03685;Name=ybfE;gbkey=Gene;gene=ybfE;gene_biotype=protein_coding;locus_tag=IY40_RS03685;old_locus_tag=IY40_03740 NZ_JPQY01000005.1 Protein Homology CDS 6611 6898 . - 0 ID=cds-WP_004939936.1;Parent=gene-IY40_RS03685;Dbxref=GenBank:WP_004939936.1;Name=WP_004939936.1;gbkey=CDS;gene=ybfE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004939936.1;locus_tag=IY40_RS03685;product=LexA regulated protein;protein_id=WP_004939936.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 7155 7928 . - . ID=gene-IY40_RS03690;Name=ybfF;gbkey=Gene;gene=ybfF;gene_biotype=protein_coding;locus_tag=IY40_RS03690;old_locus_tag=IY40_03745 NZ_JPQY01000005.1 Protein Homology CDS 7155 7928 . - 0 ID=cds-WP_025301863.1;Parent=gene-IY40_RS03690;Dbxref=GenBank:WP_025301863.1;Name=WP_025301863.1;gbkey=CDS;gene=ybfF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017891930.1;locus_tag=IY40_RS03690;product=esterase;protein_id=WP_025301863.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 8153 8695 . + . ID=gene-IY40_RS03695;Name=seqA;gbkey=Gene;gene=seqA;gene_biotype=protein_coding;locus_tag=IY40_RS03695;old_locus_tag=IY40_03750 NZ_JPQY01000005.1 Protein Homology CDS 8153 8695 . + 0 ID=cds-WP_025301864.1;Parent=gene-IY40_RS03695;Dbxref=GenBank:WP_025301864.1;Name=WP_025301864.1;Ontology_term=GO:0032297,GO:0003677;gbkey=CDS;gene=seqA;go_function=DNA binding|0003677||IEA;go_process=negative regulation of DNA-templated DNA replication initiation|0032297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017891931.1;locus_tag=IY40_RS03695;product=replication initiation negative regulator SeqA;protein_id=WP_025301864.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 8773 10416 . + . ID=gene-IY40_RS03700;Name=pgm;gbkey=Gene;gene=pgm;gene_biotype=protein_coding;locus_tag=IY40_RS03700;old_locus_tag=IY40_03755 NZ_JPQY01000005.1 Protein Homology CDS 8773 10416 . + 0 ID=cds-WP_016928750.1;Parent=gene-IY40_RS03700;Dbxref=GenBank:WP_016928750.1;Name=WP_016928750.1;Ontology_term=GO:0005975,GO:0004614;gbkey=CDS;gene=pgm;go_function=phosphoglucomutase activity|0004614||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012005678.1;locus_tag=IY40_RS03700;product=phosphoglucomutase (alpha-D-glucose-1%2C6-bisphosphate-dependent);protein_id=WP_016928750.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 10608 11249 . + . ID=gene-IY40_RS03705;Name=IY40_RS03705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS03705;old_locus_tag=IY40_03760 NZ_JPQY01000005.1 Protein Homology CDS 10608 11249 . + 0 ID=cds-WP_025301865.1;Parent=gene-IY40_RS03705;Dbxref=GenBank:WP_025301865.1;Name=WP_025301865.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192909.1;locus_tag=IY40_RS03705;product=PadR family transcriptional regulator;protein_id=WP_025301865.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 11249 11548 . + . ID=gene-IY40_RS03710;Name=IY40_RS03710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS03710;old_locus_tag=IY40_03765 NZ_JPQY01000005.1 Protein Homology CDS 11249 11548 . + 0 ID=cds-WP_004939927.1;Parent=gene-IY40_RS03710;Dbxref=GenBank:WP_004939927.1;Name=WP_004939927.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019454052.1;locus_tag=IY40_RS03710;product=DUF3861 domain-containing protein;protein_id=WP_004939927.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 11576 12265 . - . ID=gene-IY40_RS03715;Name=kdpE;gbkey=Gene;gene=kdpE;gene_biotype=protein_coding;locus_tag=IY40_RS03715;old_locus_tag=IY40_03770 NZ_JPQY01000005.1 Protein Homology CDS 11576 12265 . - 0 ID=cds-WP_016928747.1;Parent=gene-IY40_RS03715;Dbxref=GenBank:WP_016928747.1;Name=WP_016928747.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=kdpE;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006319970.1;locus_tag=IY40_RS03715;product=two-component system response regulator KdpE;protein_id=WP_016928747.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 12282 14978 . - . ID=gene-IY40_RS03720;Name=kdpD;gbkey=Gene;gene=kdpD;gene_biotype=protein_coding;locus_tag=IY40_RS03720;old_locus_tag=IY40_03775 NZ_JPQY01000005.1 Protein Homology CDS 12282 14978 . - 0 ID=cds-WP_043136571.1;Parent=gene-IY40_RS03720;Dbxref=GenBank:WP_043136571.1;Name=WP_043136571.1;Ontology_term=GO:0000160,GO:0000155;gbkey=CDS;gene=kdpD;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013811906.1;locus_tag=IY40_RS03720;product=two-component system sensor histidine kinase KdpD;protein_id=WP_043136571.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 15052 15621 . - . ID=gene-IY40_RS03725;Name=kdpC;gbkey=Gene;gene=kdpC;gene_biotype=protein_coding;locus_tag=IY40_RS03725;old_locus_tag=IY40_03780 NZ_JPQY01000005.1 Protein Homology CDS 15052 15621 . - 0 ID=cds-WP_025301867.1;Parent=gene-IY40_RS03725;Dbxref=GenBank:WP_025301867.1;Name=WP_025301867.1;Ontology_term=GO:0006813,GO:0008556,GO:0016020;gbkey=CDS;gene=kdpC;go_component=membrane|0016020||IEA;go_function=P-type potassium transmembrane transporter activity|0008556||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006319975.1;locus_tag=IY40_RS03725;product=potassium-transporting ATPase subunit KdpC;protein_id=WP_025301867.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 15640 17709 . - . ID=gene-IY40_RS03730;Name=kdpB;gbkey=Gene;gene=kdpB;gene_biotype=protein_coding;locus_tag=IY40_RS03730;old_locus_tag=IY40_03785 NZ_JPQY01000005.1 Protein Homology CDS 15640 17709 . - 0 ID=cds-WP_025301868.1;Parent=gene-IY40_RS03730;Dbxref=GenBank:WP_025301868.1;Name=WP_025301868.1;Ontology_term=GO:0006813,GO:0005524,GO:0008556,GO:0016020,GO:0031004;gbkey=CDS;gene=kdpB;go_component=membrane|0016020||IEA,potassium ion-transporting ATPase complex|0031004||IEA;go_function=ATP binding|0005524||IEA,P-type potassium transmembrane transporter activity|0008556||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006319977.1;locus_tag=IY40_RS03730;product=potassium-transporting ATPase subunit KdpB;protein_id=WP_025301868.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 17736 19424 . - . ID=gene-IY40_RS03735;Name=kdpA;gbkey=Gene;gene=kdpA;gene_biotype=protein_coding;locus_tag=IY40_RS03735;old_locus_tag=IY40_03790 NZ_JPQY01000005.1 Protein Homology CDS 17736 19424 . - 0 ID=cds-WP_043136574.1;Parent=gene-IY40_RS03735;Dbxref=GenBank:WP_043136574.1;Name=WP_043136574.1;Ontology_term=GO:0006813,GO:0008556,GO:0031004;gbkey=CDS;gene=kdpA;go_component=potassium ion-transporting ATPase complex|0031004||IEA;go_function=P-type potassium transmembrane transporter activity|0008556||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011816819.1;locus_tag=IY40_RS03735;product=potassium-transporting ATPase subunit KdpA;protein_id=WP_043136574.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 19424 19513 . - . ID=gene-IY40_RS03740;Name=IY40_RS03740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS03740 NZ_JPQY01000005.1 Protein Homology CDS 19424 19513 . - 0 ID=cds-WP_016928742.1;Parent=gene-IY40_RS03740;Dbxref=GenBank:WP_016928742.1;Name=WP_016928742.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017492611.1;locus_tag=IY40_RS03740;product=K(+)-transporting ATPase subunit F;protein_id=WP_016928742.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 19954 20163 . + . ID=gene-IY40_RS03745;Name=IY40_RS03745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS03745;old_locus_tag=IY40_03800 NZ_JPQY01000005.1 Protein Homology CDS 19954 20163 . + 0 ID=cds-WP_004939916.1;Parent=gene-IY40_RS03745;Dbxref=GenBank:WP_004939916.1;Name=WP_004939916.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004939916.1;locus_tag=IY40_RS03745;product=YbfA family protein;protein_id=WP_004939916.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 20306 21262 . + . ID=gene-IY40_RS03750;Name=IY40_RS03750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS03750;old_locus_tag=IY40_03805 NZ_JPQY01000005.1 Protein Homology CDS 20306 21262 . + 0 ID=cds-WP_043136577.1;Parent=gene-IY40_RS03750;Dbxref=GenBank:WP_043136577.1;Name=WP_043136577.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019454046.1;locus_tag=IY40_RS03750;product=YbgA family protein;protein_id=WP_043136577.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 21278 22708 . + . ID=gene-IY40_RS03755;Name=phrB;gbkey=Gene;gene=phrB;gene_biotype=protein_coding;locus_tag=IY40_RS03755;old_locus_tag=IY40_03810 NZ_JPQY01000005.1 Protein Homology CDS 21278 22708 . + 0 ID=cds-WP_043136580.1;Parent=gene-IY40_RS03755;Dbxref=GenBank:WP_043136580.1;Name=WP_043136580.1;gbkey=CDS;gene=phrB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015376966.1;locus_tag=IY40_RS03755;product=deoxyribodipyrimidine photo-lyase;protein_id=WP_043136580.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 22731 23711 . + . ID=gene-IY40_RS03760;Name=IY40_RS03760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS03760;old_locus_tag=IY40_03815 NZ_JPQY01000005.1 Protein Homology CDS 22731 23711 . + 0 ID=cds-WP_043136583.1;Parent=gene-IY40_RS03760;Dbxref=GenBank:WP_043136583.1;Name=WP_043136583.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016928739.1;locus_tag=IY40_RS03760;product=MBL fold metallo-hydrolase;protein_id=WP_043136583.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 23730 24473 . + . ID=gene-IY40_RS03765;Name=IY40_RS03765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS03765;old_locus_tag=IY40_03820 NZ_JPQY01000005.1 Protein Homology CDS 23730 24473 . + 0 ID=cds-WP_025301873.1;Parent=gene-IY40_RS03765;Dbxref=GenBank:WP_025301873.1;Name=WP_025301873.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006319989.1;locus_tag=IY40_RS03765;product=type 2 GTP cyclohydrolase I;protein_id=WP_025301873.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 24633 25289 . + . ID=gene-IY40_RS03770;Name=pxpB;gbkey=Gene;gene=pxpB;gene_biotype=protein_coding;locus_tag=IY40_RS03770;old_locus_tag=IY40_03825 NZ_JPQY01000005.1 Protein Homology CDS 24633 25289 . + 0 ID=cds-WP_025301874.1;Parent=gene-IY40_RS03770;Dbxref=GenBank:WP_025301874.1;Name=WP_025301874.1;Ontology_term=GO:0005975,GO:0008152,GO:0017168;gbkey=CDS;gene=pxpB;go_function=5-oxoprolinase (ATP-hydrolyzing) activity|0017168||IEA;go_process=carbohydrate metabolic process|0005975||IEA,metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192830.1;locus_tag=IY40_RS03770;product=5-oxoprolinase subunit PxpB;protein_id=WP_025301874.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 25283 26215 . + . ID=gene-IY40_RS03775;Name=pxpC;gbkey=Gene;gene=pxpC;gene_biotype=protein_coding;locus_tag=IY40_RS03775;old_locus_tag=IY40_03830 NZ_JPQY01000005.1 Protein Homology CDS 25283 26215 . + 0 ID=cds-WP_025301875.1;Parent=gene-IY40_RS03775;Dbxref=GenBank:WP_025301875.1;Name=WP_025301875.1;Ontology_term=GO:0005975,GO:0008152,GO:0017168;gbkey=CDS;gene=pxpC;go_function=5-oxoprolinase (ATP-hydrolyzing) activity|0017168||IEA;go_process=carbohydrate metabolic process|0005975||IEA,metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019454041.1;locus_tag=IY40_RS03775;product=5-oxoprolinase subunit PxpC;protein_id=WP_025301875.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 26205 26945 . + . ID=gene-IY40_RS03780;Name=pxpA;gbkey=Gene;gene=pxpA;gene_biotype=protein_coding;locus_tag=IY40_RS03780;old_locus_tag=IY40_03835 NZ_JPQY01000005.1 Protein Homology CDS 26205 26945 . + 0 ID=cds-WP_043136590.1;Parent=gene-IY40_RS03780;Dbxref=GenBank:WP_043136590.1;Name=WP_043136590.1;Ontology_term=GO:0005975,GO:0003824;gbkey=CDS;gene=pxpA;go_function=catalytic activity|0003824||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016928735.1;locus_tag=IY40_RS03780;product=5-oxoprolinase subunit PxpA;protein_id=WP_043136590.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 27008 27739 . + . ID=gene-IY40_RS03785;Name=IY40_RS03785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS03785;old_locus_tag=IY40_03840 NZ_JPQY01000005.1 Protein Homology CDS 27008 27739 . + 0 ID=cds-WP_016928734.1;Parent=gene-IY40_RS03785;Dbxref=GenBank:WP_016928734.1;Name=WP_016928734.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004715773.1;locus_tag=IY40_RS03785;product=DUF969 domain-containing protein;protein_id=WP_016928734.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 27736 28755 . + . ID=gene-IY40_RS03790;Name=IY40_RS03790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS03790;old_locus_tag=IY40_03845 NZ_JPQY01000005.1 Protein Homology CDS 27736 28755 . + 0 ID=cds-WP_043136594.1;Parent=gene-IY40_RS03790;Dbxref=GenBank:WP_043136594.1;Name=WP_043136594.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225859.1;locus_tag=IY40_RS03790;product=DUF979 domain-containing protein;protein_id=WP_043136594.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 28764 29408 . + . ID=gene-IY40_RS03795;Name=pcp;gbkey=Gene;gene=pcp;gene_biotype=protein_coding;locus_tag=IY40_RS03795;old_locus_tag=IY40_03850 NZ_JPQY01000005.1 Protein Homology CDS 28764 29408 . + 0 ID=cds-WP_016928732.1;Parent=gene-IY40_RS03795;Dbxref=GenBank:WP_016928732.1;Name=WP_016928732.1;Ontology_term=GO:0006508,GO:0008234,GO:0016920,GO:0005829;gbkey=CDS;gene=pcp;go_component=cytosol|0005829||IEA;go_function=cysteine-type peptidase activity|0008234||IEA,pyroglutamyl-peptidase activity|0016920||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209662.1;locus_tag=IY40_RS03795;product=pyroglutamyl-peptidase I;protein_id=WP_016928732.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 29463 30254 . + . ID=gene-IY40_RS03800;Name=nei;gbkey=Gene;gene=nei;gene_biotype=protein_coding;locus_tag=IY40_RS03800;old_locus_tag=IY40_03855 NZ_JPQY01000005.1 Protein Homology CDS 29463 30254 . + 0 ID=cds-WP_025301879.1;Parent=gene-IY40_RS03800;Dbxref=GenBank:WP_025301879.1;Name=WP_025301879.1;Ontology_term=GO:0006281,GO:0000703,GO:0003677,GO:0008270,GO:0140078;gbkey=CDS;gene=nei;go_function=oxidized pyrimidine nucleobase lesion DNA N-glycosylase activity|0000703||IEA,DNA binding|0003677||IEA,zinc ion binding|0008270||IEA,class I DNA-(apurinic or apyrimidinic site) endonuclease activity|0140078||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004949743.1;locus_tag=IY40_RS03800;product=endonuclease VIII;protein_id=WP_025301879.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 30315 31607 . - . ID=gene-IY40_RS03805;Name=IY40_RS03805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS03805;old_locus_tag=IY40_03860 NZ_JPQY01000005.1 Protein Homology CDS 30315 31607 . - 0 ID=cds-WP_016928730.1;Parent=gene-IY40_RS03805;Dbxref=GenBank:WP_016928730.1;Name=WP_016928730.1;Ontology_term=GO:0046912;gbkey=CDS;go_function=acyltransferase activity%2C acyl groups converted into alkyl on transfer|0046912||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013811919.1;locus_tag=IY40_RS03805;product=citrate synthase;protein_id=WP_016928730.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 32337 32726 . + . ID=gene-IY40_RS03810;Name=sdhC;gbkey=Gene;gene=sdhC;gene_biotype=protein_coding;gene_synonym=cybA,dhsC;locus_tag=IY40_RS03810;old_locus_tag=IY40_03865 NZ_JPQY01000005.1 Protein Homology CDS 32337 32726 . + 0 ID=cds-WP_004939893.1;Parent=gene-IY40_RS03810;Dbxref=GenBank:WP_004939893.1;Name=WP_004939893.1;Ontology_term=GO:0006099,GO:0000104,GO:0009055,GO:0016020,GO:0045273;gbkey=CDS;gene=sdhC;go_component=membrane|0016020||IEA,respiratory chain complex II (succinate dehydrogenase)|0045273||IEA;go_function=succinate dehydrogenase activity|0000104||IEA,electron transfer activity|0009055||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210722.1;locus_tag=IY40_RS03810;product=succinate dehydrogenase cytochrome b556 subunit;protein_id=WP_004939893.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 32720 33067 . + . ID=gene-IY40_RS03815;Name=sdhD;gbkey=Gene;gene=sdhD;gene_biotype=protein_coding;gene_synonym=cybS,dhsD;locus_tag=IY40_RS03815;old_locus_tag=IY40_03870 NZ_JPQY01000005.1 Protein Homology CDS 32720 33067 . + 0 ID=cds-WP_004939891.1;Parent=gene-IY40_RS03815;Dbxref=GenBank:WP_004939891.1;Name=WP_004939891.1;gbkey=CDS;gene=sdhD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019082678.1;locus_tag=IY40_RS03815;product=succinate dehydrogenase membrane anchor subunit;protein_id=WP_004939891.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 33068 34834 . + . ID=gene-IY40_RS03820;Name=sdhA;gbkey=Gene;gene=sdhA;gene_biotype=protein_coding;locus_tag=IY40_RS03820;old_locus_tag=IY40_03875 NZ_JPQY01000005.1 Protein Homology CDS 33068 34834 . + 0 ID=cds-WP_015376974.1;Parent=gene-IY40_RS03820;Dbxref=GenBank:WP_015376974.1;Name=WP_015376974.1;Ontology_term=GO:0006099,GO:0016627,GO:0050660;gbkey=CDS;gene=sdhA;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308775.1;locus_tag=IY40_RS03820;product=succinate dehydrogenase flavoprotein subunit;protein_id=WP_015376974.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 34851 35567 . + . ID=gene-IY40_RS03825;Name=IY40_RS03825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS03825;old_locus_tag=IY40_03880 NZ_JPQY01000005.1 Protein Homology CDS 34851 35567 . + 0 ID=cds-WP_043136598.1;Parent=gene-IY40_RS03825;Dbxref=GenBank:WP_043136598.1;Name=WP_043136598.1;Ontology_term=GO:0008177,GO:0046872;gbkey=CDS;go_function=succinate dehydrogenase (quinone) activity|0008177||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133276.1;locus_tag=IY40_RS03825;product=succinate dehydrogenase iron-sulfur subunit;protein_id=WP_043136598.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 35843 38650 . + . ID=gene-IY40_RS03830;Name=sucA;gbkey=Gene;gene=sucA;gene_biotype=protein_coding;locus_tag=IY40_RS03830;old_locus_tag=IY40_03885 NZ_JPQY01000005.1 Protein Homology CDS 35843 38650 . + 0 ID=cds-WP_043137179.1;Parent=gene-IY40_RS03830;Dbxref=GenBank:WP_043137179.1;Name=WP_043137179.1;Ontology_term=GO:0006099,GO:0004591,GO:0030976,GO:0045252;gbkey=CDS;gene=sucA;go_component=oxoglutarate dehydrogenase complex|0045252||IEA;go_function=oxoglutarate dehydrogenase (succinyl-transferring) activity|0004591||IEA,thiamine pyrophosphate binding|0030976||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210726.1;locus_tag=IY40_RS03830;product=2-oxoglutarate dehydrogenase E1 component;protein_id=WP_043137179.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 38714 39931 . + . ID=gene-IY40_RS03835;Name=odhB;gbkey=Gene;gene=odhB;gene_biotype=protein_coding;locus_tag=IY40_RS03835;old_locus_tag=IY40_03890 NZ_JPQY01000005.1 Protein Homology CDS 38714 39931 . + 0 ID=cds-WP_043136601.1;Parent=gene-IY40_RS03835;Dbxref=GenBank:WP_043136601.1;Name=WP_043136601.1;Ontology_term=GO:0006099,GO:0004149,GO:0045252;gbkey=CDS;gene=odhB;go_component=oxoglutarate dehydrogenase complex|0045252||IEA;go_function=dihydrolipoyllysine-residue succinyltransferase activity|0004149||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210727.1;locus_tag=IY40_RS03835;product=2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase;protein_id=WP_043136601.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 40054 41220 . + . ID=gene-IY40_RS03840;Name=sucC;gbkey=Gene;gene=sucC;gene_biotype=protein_coding;locus_tag=IY40_RS03840;old_locus_tag=IY40_03895 NZ_JPQY01000005.1 Protein Homology CDS 40054 41220 . + 0 ID=cds-WP_025301883.1;Parent=gene-IY40_RS03840;Dbxref=GenBank:WP_025301883.1;Name=WP_025301883.1;Ontology_term=GO:0006099,GO:0003824,GO:0005524,GO:0046872;gbkey=CDS;gene=sucC;go_function=catalytic activity|0003824||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133271.1;locus_tag=IY40_RS03840;product=ADP-forming succinate--CoA ligase subunit beta;protein_id=WP_025301883.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 41220 42092 . + . ID=gene-IY40_RS03845;Name=sucD;gbkey=Gene;gene=sucD;gene_biotype=protein_coding;locus_tag=IY40_RS03845;old_locus_tag=IY40_03900 NZ_JPQY01000005.1 Protein Homology CDS 41220 42092 . + 0 ID=cds-WP_004939878.1;Parent=gene-IY40_RS03845;Dbxref=GenBank:WP_004939878.1;Name=WP_004939878.1;Ontology_term=GO:0003824;gbkey=CDS;gene=sucD;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006660448.1;locus_tag=IY40_RS03845;product=succinate--CoA ligase subunit alpha;protein_id=WP_004939878.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 42165 44063 . - . ID=gene-IY40_RS03850;Name=IY40_RS03850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS03850;old_locus_tag=IY40_03905 NZ_JPQY01000005.1 Protein Homology CDS 42165 44063 . - 0 ID=cds-WP_043136603.1;Parent=gene-IY40_RS03850;Dbxref=GenBank:WP_043136603.1;Name=WP_043136603.1;Ontology_term=GO:0009166,GO:0000166,GO:0008253,GO:0042578,GO:0046872;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,5'-nucleotidase activity|0008253||IEA,phosphoric ester hydrolase activity|0042578||IEA,metal ion binding|0046872||IEA;go_process=nucleotide catabolic process|0009166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006324111.1;locus_tag=IY40_RS03850;product=bifunctional metallophosphatase/5'-nucleotidase;protein_id=WP_043136603.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 44747 46315 . + . ID=gene-IY40_RS03855;Name=cydA;gbkey=Gene;gene=cydA;gene_biotype=protein_coding;locus_tag=IY40_RS03855;old_locus_tag=IY40_03910 NZ_JPQY01000005.1 Protein Homology CDS 44747 46315 . + 0 ID=cds-WP_019454034.1;Parent=gene-IY40_RS03855;Dbxref=GenBank:WP_019454034.1;Name=WP_019454034.1;Ontology_term=GO:0019646,GO:0009055,GO:0070069;gbkey=CDS;gene=cydA;go_component=cytochrome complex|0070069||IEA;go_function=electron transfer activity|0009055||IEA;go_process=aerobic electron transport chain|0019646||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459725.1;locus_tag=IY40_RS03855;product=cytochrome ubiquinol oxidase subunit I;protein_id=WP_019454034.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 46330 47469 . + . ID=gene-IY40_RS03860;Name=cydB;gbkey=Gene;gene=cydB;gene_biotype=protein_coding;locus_tag=IY40_RS03860;old_locus_tag=IY40_03915 NZ_JPQY01000005.1 Protein Homology CDS 46330 47469 . + 0 ID=cds-WP_019454033.1;Parent=gene-IY40_RS03860;Dbxref=GenBank:WP_019454033.1;Name=WP_019454033.1;Ontology_term=GO:0016020;gbkey=CDS;gene=cydB;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004393310.1;locus_tag=IY40_RS03860;product=cytochrome d ubiquinol oxidase subunit II;protein_id=WP_019454033.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 47487 47600 . + . ID=gene-IY40_RS25030;Name=cydX;gbkey=Gene;gene=cydX;gene_biotype=protein_coding;gene_synonym=ybgT;locus_tag=IY40_RS25030 NZ_JPQY01000005.1 Protein Homology CDS 47487 47600 . + 0 ID=cds-WP_004939868.1;Parent=gene-IY40_RS25030;Dbxref=GenBank:WP_004939868.1;Name=WP_004939868.1;Ontology_term=GO:0016682;gbkey=CDS;gene=cydX;go_function=oxidoreductase activity%2C acting on diphenols and related substances as donors%2C oxygen as acceptor|0016682||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006324114.1;locus_tag=IY40_RS25030;product=cytochrome bd-I oxidase subunit CydX;protein_id=WP_004939868.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 47600 47896 . + . ID=gene-IY40_RS03865;Name=ybgE;gbkey=Gene;gene=ybgE;gene_biotype=protein_coding;locus_tag=IY40_RS03865;old_locus_tag=IY40_03925 NZ_JPQY01000005.1 Protein Homology CDS 47600 47896 . + 0 ID=cds-WP_025301885.1;Parent=gene-IY40_RS03865;Dbxref=GenBank:WP_025301885.1;Name=WP_025301885.1;gbkey=CDS;gene=ybgE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019454032.1;locus_tag=IY40_RS03865;product=cyd operon protein YbgE;protein_id=WP_025301885.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 48027 48431 . + . ID=gene-IY40_RS03870;Name=ybgC;gbkey=Gene;gene=ybgC;gene_biotype=protein_coding;locus_tag=IY40_RS03870;old_locus_tag=IY40_03930 NZ_JPQY01000005.1 Protein Homology CDS 48027 48431 . + 0 ID=cds-WP_004939863.1;Parent=gene-IY40_RS03870;Dbxref=GenBank:WP_004939863.1;Name=WP_004939863.1;gbkey=CDS;gene=ybgC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017494054.1;locus_tag=IY40_RS03870;product=tol-pal system-associated acyl-CoA thioesterase;protein_id=WP_004939863.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 48428 49111 . + . ID=gene-IY40_RS03875;Name=tolQ;gbkey=Gene;gene=tolQ;gene_biotype=protein_coding;locus_tag=IY40_RS03875;old_locus_tag=IY40_03935 NZ_JPQY01000005.1 Protein Homology CDS 48428 49111 . + 0 ID=cds-WP_004939862.1;Parent=gene-IY40_RS03875;Dbxref=GenBank:WP_004939862.1;Name=WP_004939862.1;gbkey=CDS;gene=tolQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015671365.1;locus_tag=IY40_RS03875;product=Tol-Pal system protein TolQ;protein_id=WP_004939862.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 49124 49552 . + . ID=gene-IY40_RS03880;Name=tolR;gbkey=Gene;gene=tolR;gene_biotype=protein_coding;locus_tag=IY40_RS03880;old_locus_tag=IY40_03940 NZ_JPQY01000005.1 Protein Homology CDS 49124 49552 . + 0 ID=cds-WP_004939859.1;Parent=gene-IY40_RS03880;Dbxref=GenBank:WP_004939859.1;Name=WP_004939859.1;gbkey=CDS;gene=tolR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015965300.1;locus_tag=IY40_RS03880;product=colicin uptake protein TolR;protein_id=WP_004939859.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 49634 50839 . + . ID=gene-IY40_RS03885;Name=tolA;gbkey=Gene;gene=tolA;gene_biotype=protein_coding;locus_tag=IY40_RS03885;old_locus_tag=IY40_03945 NZ_JPQY01000005.1 Protein Homology CDS 49634 50839 . + 0 ID=cds-WP_043136605.1;Parent=gene-IY40_RS03885;Dbxref=GenBank:WP_043136605.1;Name=WP_043136605.1;Ontology_term=GO:0043213,GO:0019534,GO:0016020;gbkey=CDS;gene=tolA;go_component=membrane|0016020||IEA;go_function=toxin transmembrane transporter activity|0019534||IEA;go_process=bacteriocin transport|0043213||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005165500.1;locus_tag=IY40_RS03885;product=cell envelope integrity protein TolA;protein_id=WP_043136605.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 50972 52264 . + . ID=gene-IY40_RS03890;Name=tolB;gbkey=Gene;gene=tolB;gene_biotype=protein_coding;locus_tag=IY40_RS03890;old_locus_tag=IY40_03950 NZ_JPQY01000005.1 Protein Homology CDS 50972 52264 . + 0 ID=cds-WP_025301887.1;Parent=gene-IY40_RS03890;Dbxref=GenBank:WP_025301887.1;Name=WP_025301887.1;Ontology_term=GO:0017038,GO:0005215,GO:0042597;gbkey=CDS;gene=tolB;go_component=periplasmic space|0042597||IEA;go_function=transporter activity|0005215||IEA;go_process=protein import|0017038||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005288883.1;locus_tag=IY40_RS03890;product=Tol-Pal system beta propeller repeat protein TolB;protein_id=WP_025301887.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 52309 52818 . + . ID=gene-IY40_RS03895;Name=pal;gbkey=Gene;gene=pal;gene_biotype=protein_coding;locus_tag=IY40_RS03895;old_locus_tag=IY40_03955 NZ_JPQY01000005.1 Protein Homology CDS 52309 52818 . + 0 ID=cds-WP_025160033.1;Parent=gene-IY40_RS03895;Dbxref=GenBank:WP_025160033.1;Name=WP_025160033.1;gbkey=CDS;gene=pal;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210739.1;locus_tag=IY40_RS03895;product=peptidoglycan-associated lipoprotein Pal;protein_id=WP_025160033.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 52828 53622 . + . ID=gene-IY40_RS03900;Name=cpoB;gbkey=Gene;gene=cpoB;gene_biotype=protein_coding;locus_tag=IY40_RS03900;old_locus_tag=IY40_03960 NZ_JPQY01000005.1 Protein Homology CDS 52828 53622 . + 0 ID=cds-WP_004939852.1;Parent=gene-IY40_RS03900;Dbxref=GenBank:WP_004939852.1;Name=WP_004939852.1;Ontology_term=GO:0051301,GO:0070206,GO:0005515;gbkey=CDS;gene=cpoB;go_function=protein binding|0005515||IEA;go_process=cell division|0051301||IEA,protein trimerization|0070206||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012005715.1;locus_tag=IY40_RS03900;product=cell division protein CpoB;protein_id=WP_004939852.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 53801 53876 . + . ID=gene-IY40_RS03905;Name=IY40_RS03905;gbkey=Gene;gene_biotype=tRNA;locus_tag=IY40_RS03905;old_locus_tag=IY40_03965 NZ_JPQY01000005.1 tRNAscan-SE tRNA 53801 53876 . + . ID=rna-IY40_RS03905;Parent=gene-IY40_RS03905;anticodon=(pos:53834..53836);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=IY40_RS03905;product=tRNA-Lys NZ_JPQY01000005.1 tRNAscan-SE exon 53801 53876 . + . ID=exon-IY40_RS03905-1;Parent=rna-IY40_RS03905;anticodon=(pos:53834..53836);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=IY40_RS03905;product=tRNA-Lys NZ_JPQY01000005.1 RefSeq gene 53906 53981 . + . ID=gene-IY40_RS03910;Name=IY40_RS03910;gbkey=Gene;gene_biotype=tRNA;locus_tag=IY40_RS03910;old_locus_tag=IY40_03970 NZ_JPQY01000005.1 tRNAscan-SE tRNA 53906 53981 . + . ID=rna-IY40_RS03910;Parent=gene-IY40_RS03910;anticodon=(pos:53939..53941);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=IY40_RS03910;product=tRNA-Val NZ_JPQY01000005.1 tRNAscan-SE exon 53906 53981 . + . ID=exon-IY40_RS03910-1;Parent=rna-IY40_RS03910;anticodon=(pos:53939..53941);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=IY40_RS03910;product=tRNA-Val NZ_JPQY01000005.1 RefSeq gene 53989 54064 . + . ID=gene-IY40_RS03915;Name=IY40_RS03915;gbkey=Gene;gene_biotype=tRNA;locus_tag=IY40_RS03915;old_locus_tag=IY40_03975 NZ_JPQY01000005.1 tRNAscan-SE tRNA 53989 54064 . + . ID=rna-IY40_RS03915;Parent=gene-IY40_RS03915;anticodon=(pos:54022..54024);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=IY40_RS03915;product=tRNA-Lys NZ_JPQY01000005.1 tRNAscan-SE exon 53989 54064 . + . ID=exon-IY40_RS03915-1;Parent=rna-IY40_RS03915;anticodon=(pos:54022..54024);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=IY40_RS03915;product=tRNA-Lys NZ_JPQY01000005.1 RefSeq gene 54216 54291 . + . ID=gene-IY40_RS03920;Name=IY40_RS03920;gbkey=Gene;gene_biotype=tRNA;locus_tag=IY40_RS03920;old_locus_tag=IY40_03980 NZ_JPQY01000005.1 tRNAscan-SE tRNA 54216 54291 . + . ID=rna-IY40_RS03920;Parent=gene-IY40_RS03920;anticodon=(pos:54249..54251);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=IY40_RS03920;product=tRNA-Lys NZ_JPQY01000005.1 tRNAscan-SE exon 54216 54291 . + . ID=exon-IY40_RS03920-1;Parent=rna-IY40_RS03920;anticodon=(pos:54249..54251);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=IY40_RS03920;product=tRNA-Lys NZ_JPQY01000005.1 RefSeq gene 54361 54497 . + . ID=gene-IY40_RS25035;Name=IY40_RS25035;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IY40_RS25035;old_locus_tag=IY40_05365 NZ_JPQY01000005.1 cmsearch ncRNA 54361 54497 . + . ID=rna-IY40_RS25035;Parent=gene-IY40_RS25035;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=IY40_RS25035;product=RtT sRNA NZ_JPQY01000005.1 cmsearch exon 54361 54497 . + . ID=exon-IY40_RS25035-1;Parent=rna-IY40_RS25035;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=IY40_RS25035;product=RtT sRNA NZ_JPQY01000005.1 RefSeq gene 54533 54608 . + . ID=gene-IY40_RS03925;Name=IY40_RS03925;gbkey=Gene;gene_biotype=tRNA;locus_tag=IY40_RS03925;old_locus_tag=IY40_03985 NZ_JPQY01000005.1 tRNAscan-SE tRNA 54533 54608 . + . ID=rna-IY40_RS03925;Parent=gene-IY40_RS03925;anticodon=(pos:54566..54568);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=IY40_RS03925;product=tRNA-Val NZ_JPQY01000005.1 tRNAscan-SE exon 54533 54608 . + . ID=exon-IY40_RS03925-1;Parent=rna-IY40_RS03925;anticodon=(pos:54566..54568);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=IY40_RS03925;product=tRNA-Val NZ_JPQY01000005.1 RefSeq gene 54615 54690 . + . ID=gene-IY40_RS03930;Name=IY40_RS03930;gbkey=Gene;gene_biotype=tRNA;locus_tag=IY40_RS03930;old_locus_tag=IY40_03990 NZ_JPQY01000005.1 tRNAscan-SE tRNA 54615 54690 . + . ID=rna-IY40_RS03930;Parent=gene-IY40_RS03930;anticodon=(pos:54648..54650);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=IY40_RS03930;product=tRNA-Lys NZ_JPQY01000005.1 tRNAscan-SE exon 54615 54690 . + . ID=exon-IY40_RS03930-1;Parent=rna-IY40_RS03930;anticodon=(pos:54648..54650);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=IY40_RS03930;product=tRNA-Lys NZ_JPQY01000005.1 RefSeq gene 54766 54890 . + . ID=gene-IY40_RS25040;Name=IY40_RS25040;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IY40_RS25040;old_locus_tag=IY40_05370 NZ_JPQY01000005.1 cmsearch ncRNA 54766 54890 . + . ID=rna-IY40_RS25040;Parent=gene-IY40_RS25040;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=IY40_RS25040;product=RtT sRNA NZ_JPQY01000005.1 cmsearch exon 54766 54890 . + . ID=exon-IY40_RS25040-1;Parent=rna-IY40_RS25040;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=IY40_RS25040;product=RtT sRNA NZ_JPQY01000005.1 RefSeq gene 55215 56276 . + . ID=gene-IY40_RS03935;Name=nadA;gbkey=Gene;gene=nadA;gene_biotype=protein_coding;locus_tag=IY40_RS03935;old_locus_tag=IY40_03995 NZ_JPQY01000005.1 Protein Homology CDS 55215 56276 . + 0 ID=cds-WP_015376982.1;Parent=gene-IY40_RS03935;Dbxref=GenBank:WP_015376982.1;Name=WP_015376982.1;Ontology_term=GO:0009435,GO:0008987,GO:0051539;gbkey=CDS;gene=nadA;go_function=quinolinate synthetase A activity|0008987||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=NAD+ biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019454028.1;locus_tag=IY40_RS03935;product=quinolinate synthase NadA;protein_id=WP_015376982.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 56297 57022 . + . ID=gene-IY40_RS03940;Name=pnuC;gbkey=Gene;gene=pnuC;gene_biotype=protein_coding;locus_tag=IY40_RS03940;old_locus_tag=IY40_04000 NZ_JPQY01000005.1 Protein Homology CDS 56297 57022 . + 0 ID=cds-WP_043136608.1;Parent=gene-IY40_RS03940;Dbxref=GenBank:WP_043136608.1;Name=WP_043136608.1;Ontology_term=GO:0015890,GO:0015663,GO:0016020;gbkey=CDS;gene=pnuC;go_component=membrane|0016020||IEA;go_function=nicotinamide mononucleotide transmembrane transporter activity|0015663||IEA;go_process=nicotinamide mononucleotide transport|0015890||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016928721.1;locus_tag=IY40_RS03940;product=nicotinamide riboside transporter PnuC;protein_id=WP_043136608.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 57058 58020 . - . ID=gene-IY40_RS03945;Name=zitB;gbkey=Gene;gene=zitB;gene_biotype=protein_coding;locus_tag=IY40_RS03945;old_locus_tag=IY40_04005 NZ_JPQY01000005.1 Protein Homology CDS 57058 58020 . - 0 ID=cds-WP_025301890.1;Parent=gene-IY40_RS03945;Dbxref=GenBank:WP_025301890.1;Name=WP_025301890.1;Ontology_term=GO:0006829,GO:0055085,GO:0005385,GO:0016020;gbkey=CDS;gene=zitB;go_component=membrane|0016020||IEA;go_function=zinc ion transmembrane transporter activity|0005385||IEA;go_process=zinc ion transport|0006829||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015376984.1;locus_tag=IY40_RS03945;product=CDF family zinc transporter ZitB;protein_id=WP_025301890.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 58020 61220 . - . ID=gene-IY40_RS03950;Name=IY40_RS03950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS03950;old_locus_tag=IY40_04010 NZ_JPQY01000005.1 Protein Homology CDS 58020 61220 . - 0 ID=cds-WP_025301891.1;Parent=gene-IY40_RS03950;Dbxref=GenBank:WP_025301891.1;Name=WP_025301891.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016928719.1;locus_tag=IY40_RS03950;product=ATP-binding protein;protein_id=WP_025301891.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 61217 61822 . - . ID=gene-IY40_RS03955;Name=IY40_RS03955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS03955;old_locus_tag=IY40_04015 NZ_JPQY01000005.1 Protein Homology CDS 61217 61822 . - 0 ID=cds-WP_025301892.1;Parent=gene-IY40_RS03955;Dbxref=GenBank:WP_025301892.1;Name=WP_025301892.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004941807.1;locus_tag=IY40_RS03955;product=response regulator transcription factor;protein_id=WP_025301892.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 62035 63087 . + . ID=gene-IY40_RS03960;Name=aroG;gbkey=Gene;gene=aroG;gene_biotype=protein_coding;locus_tag=IY40_RS03960;old_locus_tag=IY40_04020 NZ_JPQY01000005.1 Protein Homology CDS 62035 63087 . + 0 ID=cds-WP_025301893.1;Parent=gene-IY40_RS03960;Dbxref=GenBank:WP_025301893.1;Name=WP_025301893.1;gbkey=CDS;gene=aroG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001109196.1;locus_tag=IY40_RS03960;product=3-deoxy-7-phosphoheptulonate synthase AroG;protein_id=WP_025301893.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 63345 64535 . + . ID=gene-IY40_RS03965;Name=IY40_RS03965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS03965;old_locus_tag=IY40_04025 NZ_JPQY01000005.1 Protein Homology CDS 63345 64535 . + 0 ID=cds-WP_043137181.1;Parent=gene-IY40_RS03965;Dbxref=GenBank:WP_043137181.1;Name=WP_043137181.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016598657.1;locus_tag=IY40_RS03965;product=YjgN family protein;protein_id=WP_043137181.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 64543 65586 . + . ID=gene-IY40_RS03970;Name=IY40_RS03970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS03970;old_locus_tag=IY40_04030 NZ_JPQY01000005.1 Protein Homology CDS 64543 65586 . + 0 ID=cds-WP_043136611.1;Parent=gene-IY40_RS03970;Dbxref=GenBank:WP_043136611.1;Name=WP_043136611.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019454021.1;locus_tag=IY40_RS03970;product=M48 family metallopeptidase;protein_id=WP_043136611.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 65636 66388 . - . ID=gene-IY40_RS03975;Name=gpmA;gbkey=Gene;gene=gpmA;gene_biotype=protein_coding;locus_tag=IY40_RS03975;old_locus_tag=IY40_04035 NZ_JPQY01000005.1 Protein Homology CDS 65636 66388 . - 0 ID=cds-WP_004939834.1;Parent=gene-IY40_RS03975;Dbxref=GenBank:WP_004939834.1;Name=WP_004939834.1;Ontology_term=GO:0006096,GO:0004619;gbkey=CDS;gene=gpmA;go_function=phosphoglycerate mutase activity|0004619||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000301556.1;locus_tag=IY40_RS03975;product=2%2C3-diphosphoglycerate-dependent phosphoglycerate mutase;protein_id=WP_004939834.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 66604 66951 . - . ID=gene-IY40_RS03980;Name=IY40_RS03980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS03980;old_locus_tag=IY40_04040 NZ_JPQY01000005.1 Protein Homology CDS 66604 66951 . - 0 ID=cds-WP_033642211.1;Parent=gene-IY40_RS03980;Dbxref=GenBank:WP_033642211.1;Name=WP_033642211.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210747.1;locus_tag=IY40_RS03980;product=PsiF family protein;protein_id=WP_033642211.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 67149 68192 . - . ID=gene-IY40_RS03985;Name=galM;gbkey=Gene;gene=galM;gene_biotype=protein_coding;locus_tag=IY40_RS03985;old_locus_tag=IY40_04045 NZ_JPQY01000005.1 Protein Homology CDS 67149 68192 . - 0 ID=cds-WP_043136624.1;Parent=gene-IY40_RS03985;Dbxref=GenBank:WP_043136624.1;Name=WP_043136624.1;Ontology_term=GO:0006012,GO:0004034;gbkey=CDS;gene=galM;go_function=aldose 1-epimerase activity|0004034||IEA;go_process=galactose metabolic process|0006012||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019454018.1;locus_tag=IY40_RS03985;product=galactose-1-epimerase;protein_id=WP_043136624.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 68186 69337 . - . ID=gene-IY40_RS03990;Name=galK;gbkey=Gene;gene=galK;gene_biotype=protein_coding;locus_tag=IY40_RS03990;old_locus_tag=IY40_04050 NZ_JPQY01000005.1 Protein Homology CDS 68186 69337 . - 0 ID=cds-WP_025301898.1;Parent=gene-IY40_RS03990;Dbxref=GenBank:WP_025301898.1;Name=WP_025301898.1;Ontology_term=GO:0006012,GO:0046835,GO:0004335,GO:0005524;gbkey=CDS;gene=galK;go_function=galactokinase activity|0004335||IEA,ATP binding|0005524||IEA;go_process=galactose metabolic process|0006012||IEA,carbohydrate phosphorylation|0046835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004877276.1;locus_tag=IY40_RS03990;product=galactokinase;protein_id=WP_025301898.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 69334 70386 . - . ID=gene-IY40_RS03995;Name=galT;gbkey=Gene;gene=galT;gene_biotype=protein_coding;locus_tag=IY40_RS03995;old_locus_tag=IY40_04055 NZ_JPQY01000005.1 Protein Homology CDS 69334 70386 . - 0 ID=cds-WP_043136628.1;Parent=gene-IY40_RS03995;Dbxref=GenBank:WP_043136628.1;Name=WP_043136628.1;Ontology_term=GO:0006012,GO:0008108,GO:0008270;gbkey=CDS;gene=galT;go_function=UDP-glucose:hexose-1-phosphate uridylyltransferase activity|0008108||IEA,zinc ion binding|0008270||IEA;go_process=galactose metabolic process|0006012||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019454016.1;locus_tag=IY40_RS03995;product=galactose-1-phosphate uridylyltransferase;protein_id=WP_043136628.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 70670 71488 . - . ID=gene-IY40_RS04000;Name=IY40_RS04000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS04000;old_locus_tag=IY40_04060 NZ_JPQY01000005.1 Protein Homology CDS 70670 71488 . - 0 ID=cds-WP_025301900.1;Parent=gene-IY40_RS04000;Dbxref=GenBank:WP_025301900.1;Name=WP_025301900.1;Ontology_term=GO:0071586,GO:0004222,GO:0070007,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=metalloendopeptidase activity|0004222||IEA,glutamic-type endopeptidase activity|0070007||IEA;go_process=CAAX-box protein processing|0071586||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004939827.1;locus_tag=IY40_RS04000;product=CPBP family intramembrane glutamic endopeptidase;protein_id=WP_025301900.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 71656 72228 . - . ID=gene-IY40_RS04005;Name=IY40_RS04005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS04005;old_locus_tag=IY40_04065 NZ_JPQY01000005.1 Protein Homology CDS 71656 72228 . - 0 ID=cds-WP_043136632.1;Parent=gene-IY40_RS04005;Dbxref=GenBank:WP_043136632.1;Name=WP_043136632.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004941837.1;locus_tag=IY40_RS04005;product=cysteine hydrolase family protein;protein_id=WP_043136632.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 72324 73811 . - . ID=gene-IY40_RS04010;Name=modF;gbkey=Gene;gene=modF;gene_biotype=protein_coding;locus_tag=IY40_RS04010;old_locus_tag=IY40_04070 NZ_JPQY01000005.1 Protein Homology CDS 72324 73811 . - 0 ID=cds-WP_043137183.1;Parent=gene-IY40_RS04010;Dbxref=GenBank:WP_043137183.1;Name=WP_043137183.1;Ontology_term=GO:0005524;gbkey=CDS;gene=modF;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015376995.1;locus_tag=IY40_RS04010;product=molybdate ABC transporter ATP-binding protein ModF;protein_id=WP_043137183.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 73902 74693 . - . ID=gene-IY40_RS04015;Name=modE;gbkey=Gene;gene=modE;gene_biotype=protein_coding;locus_tag=IY40_RS04015;old_locus_tag=IY40_04075 NZ_JPQY01000005.1 Protein Homology CDS 73902 74693 . - 0 ID=cds-WP_043136636.1;Parent=gene-IY40_RS04015;Dbxref=GenBank:WP_043136636.1;Name=WP_043136636.1;Ontology_term=GO:0006355,GO:0015689,GO:0003700,GO:0030151;gbkey=CDS;gene=modE;go_function=DNA-binding transcription factor activity|0003700||IEA,molybdenum ion binding|0030151||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013649518.1;locus_tag=IY40_RS04015;product=molybdenum-dependent transcriptional regulator;protein_id=WP_043136636.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 74882 77044 . + . ID=gene-IY40_RS04020;Name=IY40_RS04020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS04020;old_locus_tag=IY40_04080 NZ_JPQY01000005.1 Protein Homology CDS 74882 77044 . + 0 ID=cds-WP_043136639.1;Parent=gene-IY40_RS04020;Dbxref=GenBank:WP_043136639.1;Name=WP_043136639.1;Ontology_term=GO:0015343,GO:0038023,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=siderophore-iron transmembrane transporter activity|0015343||IEA,signaling receptor activity|0038023||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004939820.1;locus_tag=IY40_RS04020;product=TonB-dependent receptor;protein_id=WP_043136639.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 77049 78044 . + . ID=gene-IY40_RS04025;Name=IY40_RS04025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS04025;old_locus_tag=IY40_04085 NZ_JPQY01000005.1 Protein Homology CDS 77049 78044 . + 0 ID=cds-WP_049295184.1;Parent=gene-IY40_RS04025;Dbxref=GenBank:WP_049295184.1;Name=WP_049295184.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016928704.1;locus_tag=IY40_RS04025;product=ABC transporter substrate-binding protein;protein_id=WP_049295184.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 78046 78801 . + . ID=gene-IY40_RS04030;Name=IY40_RS04030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS04030;old_locus_tag=IY40_04090 NZ_JPQY01000005.1 Protein Homology CDS 78046 78801 . + 0 ID=cds-WP_043136642.1;Parent=gene-IY40_RS04030;Dbxref=GenBank:WP_043136642.1;Name=WP_043136642.1;Ontology_term=GO:0032259,GO:0008168,GO:0008757,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015376999.1;locus_tag=IY40_RS04030;product=class I SAM-dependent methyltransferase;protein_id=WP_043136642.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 78803 79828 . + . ID=gene-IY40_RS04035;Name=IY40_RS04035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS04035;old_locus_tag=IY40_04095 NZ_JPQY01000005.1 Protein Homology CDS 78803 79828 . + 0 ID=cds-WP_043136646.1;Parent=gene-IY40_RS04035;Dbxref=GenBank:WP_043136646.1;Name=WP_043136646.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015377000.1;locus_tag=IY40_RS04035;product=FecCD family ABC transporter permease;protein_id=WP_043136646.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 79852 80613 . + . ID=gene-IY40_RS04040;Name=IY40_RS04040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS04040;old_locus_tag=IY40_04100 NZ_JPQY01000005.1 Protein Homology CDS 79852 80613 . + 0 ID=cds-WP_406675740.1;Parent=gene-IY40_RS04040;Dbxref=GenBank:WP_406675740.1;Name=WP_406675740.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: protein motif:HMM:NF012235.6;locus_tag=IY40_RS04040;product=ABC transporter ATP-binding protein;protein_id=WP_406675740.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 80760 80909 . + . ID=gene-IY40_RS25045;Name=IY40_RS25045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS25045;old_locus_tag=IY40_04105 NZ_JPQY01000005.1 Protein Homology CDS 80760 80909 . + 0 ID=cds-WP_004939813.1;Parent=gene-IY40_RS25045;Dbxref=GenBank:WP_004939813.1;Name=WP_004939813.1;Ontology_term=GO:1990961,GO:0042910,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=xenobiotic transmembrane transporter activity|0042910||IEA;go_process=xenobiotic detoxification by transmembrane export across the plasma membrane|1990961||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004939813.1;locus_tag=IY40_RS25045;product=AcrZ family multidrug efflux pump-associated protein;protein_id=WP_004939813.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 81068 81841 . + . ID=gene-IY40_RS04050;Name=modA;gbkey=Gene;gene=modA;gene_biotype=protein_coding;locus_tag=IY40_RS04050;old_locus_tag=IY40_04110 NZ_JPQY01000005.1 Protein Homology CDS 81068 81841 . + 0 ID=cds-WP_043136653.1;Parent=gene-IY40_RS04050;Dbxref=GenBank:WP_043136653.1;Name=WP_043136653.1;Ontology_term=GO:0015689;gbkey=CDS;gene=modA;go_process=molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017891963.1;locus_tag=IY40_RS04050;product=molybdate ABC transporter substrate-binding protein;protein_id=WP_043136653.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 81838 82527 . + . ID=gene-IY40_RS04055;Name=modB;gbkey=Gene;gene=modB;gene_biotype=protein_coding;locus_tag=IY40_RS04055;old_locus_tag=IY40_04115 NZ_JPQY01000005.1 Protein Homology CDS 81838 82527 . + 0 ID=cds-WP_043136657.1;Parent=gene-IY40_RS04055;Dbxref=GenBank:WP_043136657.1;Name=WP_043136657.1;Ontology_term=GO:0015689,GO:0015098,GO:0016020;gbkey=CDS;gene=modB;go_component=membrane|0016020||IEA;go_function=molybdate ion transmembrane transporter activity|0015098||IEA;go_process=molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015377003.1;locus_tag=IY40_RS04055;product=molybdate ABC transporter permease subunit;protein_id=WP_043136657.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 82528 83595 . + . ID=gene-IY40_RS04060;Name=modC;gbkey=Gene;gene=modC;gene_biotype=protein_coding;locus_tag=IY40_RS04060;old_locus_tag=IY40_04120 NZ_JPQY01000005.1 Protein Homology CDS 82528 83595 . + 0 ID=cds-WP_043136662.1;Parent=gene-IY40_RS04060;Dbxref=GenBank:WP_043136662.1;Name=WP_043136662.1;Ontology_term=GO:0015689,GO:0005524,GO:0015098,GO:0016020;gbkey=CDS;gene=modC;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,molybdate ion transmembrane transporter activity|0015098||IEA;go_process=molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006324148.1;locus_tag=IY40_RS04060;product=molybdenum ABC transporter ATP-binding protein ModC;protein_id=WP_043136662.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 83627 84445 . - . ID=gene-IY40_RS04065;Name=IY40_RS04065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS04065;old_locus_tag=IY40_04125 NZ_JPQY01000005.1 Protein Homology CDS 83627 84445 . - 0 ID=cds-WP_043137190.1;Parent=gene-IY40_RS04065;Dbxref=GenBank:WP_043137190.1;Name=WP_043137190.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004939809.1;locus_tag=IY40_RS04065;product=pyridoxal phosphatase;protein_id=WP_043137190.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 84624 85619 . + . ID=gene-IY40_RS04070;Name=pgl;gbkey=Gene;gene=pgl;gene_biotype=protein_coding;gene_synonym=ybhE;locus_tag=IY40_RS04070;old_locus_tag=IY40_04130 NZ_JPQY01000005.1 Protein Homology CDS 84624 85619 . + 0 ID=cds-WP_025301912.1;Parent=gene-IY40_RS04070;Dbxref=GenBank:WP_025301912.1;Name=WP_025301912.1;Ontology_term=GO:0017057;gbkey=CDS;gene=pgl;go_function=6-phosphogluconolactonase activity|0017057||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016928695.1;locus_tag=IY40_RS04070;product=6-phosphogluconolactonase;protein_id=WP_025301912.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 85687 86169 . - . ID=gene-IY40_RS04075;Name=IY40_RS04075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS04075;old_locus_tag=IY40_04135 NZ_JPQY01000005.1 Protein Homology CDS 85687 86169 . - 0 ID=cds-WP_025301913.1;Parent=gene-IY40_RS04075;Dbxref=GenBank:WP_025301913.1;Name=WP_025301913.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019454001.1;locus_tag=IY40_RS04075;product=kinase inhibitor;protein_id=WP_025301913.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 86202 87170 . - . ID=gene-IY40_RS04080;Name=dmeF;gbkey=Gene;gene=dmeF;gene_biotype=protein_coding;locus_tag=IY40_RS04080;old_locus_tag=IY40_04140 NZ_JPQY01000005.1 Protein Homology CDS 86202 87170 . - 0 ID=cds-WP_072008227.1;Parent=gene-IY40_RS04080;Dbxref=GenBank:WP_072008227.1;Name=WP_072008227.1;Ontology_term=GO:0006812,GO:0055085,GO:0008324,GO:0016020;gbkey=CDS;gene=dmeF;go_component=membrane|0016020||IEA;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA;go_process=monoatomic cation transport|0006812||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015377009.1;locus_tag=IY40_RS04080;product=CDF family Co(II)/Ni(II) efflux transporter DmeF;protein_id=WP_072008227.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 87249 87524 . + . ID=gene-IY40_RS04085;Name=IY40_RS04085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS04085;old_locus_tag=IY40_04145 NZ_JPQY01000005.1 Protein Homology CDS 87249 87524 . + 0 ID=cds-WP_043136668.1;Parent=gene-IY40_RS04085;Dbxref=GenBank:WP_043136668.1;Name=WP_043136668.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_025301915.1;locus_tag=IY40_RS04085;product=metal/formaldehyde-sensitive transcriptional repressor;protein_id=WP_043136668.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 87527 87928 . + . ID=gene-IY40_RS04090;Name=IY40_RS04090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS04090;old_locus_tag=IY40_04150 NZ_JPQY01000005.1 Protein Homology CDS 87527 87928 . + 0 ID=cds-WP_025301916.1;Parent=gene-IY40_RS04090;Dbxref=GenBank:WP_025301916.1;Name=WP_025301916.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019453998.1;locus_tag=IY40_RS04090;product=YkvA family protein;protein_id=WP_025301916.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 87933 89207 . - . ID=gene-IY40_RS04095;Name=bioA;gbkey=Gene;gene=bioA;gene_biotype=protein_coding;locus_tag=IY40_RS04095;old_locus_tag=IY40_04155 NZ_JPQY01000005.1 Protein Homology CDS 87933 89207 . - 0 ID=cds-WP_043136671.1;Parent=gene-IY40_RS04095;Dbxref=GenBank:WP_043136671.1;Name=WP_043136671.1;Ontology_term=GO:0009102,GO:0004015,GO:0030170;gbkey=CDS;gene=bioA;go_function=adenosylmethionine-8-amino-7-oxononanoate transaminase activity|0004015||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015377010.1;locus_tag=IY40_RS04095;product=adenosylmethionine--8-amino-7-oxononanoate transaminase;protein_id=WP_043136671.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 89296 90333 . + . ID=gene-IY40_RS04100;Name=bioB;gbkey=Gene;gene=bioB;gene_biotype=protein_coding;locus_tag=IY40_RS04100;old_locus_tag=IY40_04160 NZ_JPQY01000005.1 Protein Homology CDS 89296 90333 . + 0 ID=cds-WP_025301918.1;Parent=gene-IY40_RS04100;Dbxref=GenBank:WP_025301918.1;Name=WP_025301918.1;Ontology_term=GO:0009102,GO:0004076,GO:0051536,GO:1904047;gbkey=CDS;gene=bioB;go_function=biotin synthase activity|0004076||IEA,iron-sulfur cluster binding|0051536||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012005745.1;locus_tag=IY40_RS04100;product=biotin synthase BioB;protein_id=WP_025301918.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 90333 91484 . + . ID=gene-IY40_RS04105;Name=bioF;gbkey=Gene;gene=bioF;gene_biotype=protein_coding;locus_tag=IY40_RS04105;old_locus_tag=IY40_04165 NZ_JPQY01000005.1 Protein Homology CDS 90333 91484 . + 0 ID=cds-WP_043136675.1;Parent=gene-IY40_RS04105;Dbxref=GenBank:WP_043136675.1;Name=WP_043136675.1;Ontology_term=GO:0009102,GO:0008710;gbkey=CDS;gene=bioF;go_function=8-amino-7-oxononanoate synthase activity|0008710||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004939799.1;locus_tag=IY40_RS04105;product=8-amino-7-oxononanoate synthase;protein_id=WP_043136675.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 91468 92235 . + . ID=gene-IY40_RS04110;Name=bioC;gbkey=Gene;gene=bioC;gene_biotype=protein_coding;locus_tag=IY40_RS04110;old_locus_tag=IY40_04170 NZ_JPQY01000005.1 Protein Homology CDS 91468 92235 . + 0 ID=cds-WP_043136679.1;Parent=gene-IY40_RS04110;Dbxref=GenBank:WP_043136679.1;Name=WP_043136679.1;Ontology_term=GO:0009102,GO:0010340;gbkey=CDS;gene=bioC;go_function=carboxyl-O-methyltransferase activity|0010340||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015377013.1;locus_tag=IY40_RS04110;product=malonyl-ACP O-methyltransferase BioC;protein_id=WP_043136679.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 92228 92902 . + . ID=gene-IY40_RS04115;Name=bioD;gbkey=Gene;gene=bioD;gene_biotype=protein_coding;locus_tag=IY40_RS04115;old_locus_tag=IY40_04175 NZ_JPQY01000005.1 Protein Homology CDS 92228 92902 . + 0 ID=cds-WP_043136683.1;Parent=gene-IY40_RS04115;Dbxref=GenBank:WP_043136683.1;Name=WP_043136683.1;Ontology_term=GO:0009102,GO:0000287,GO:0004141,GO:0005524;gbkey=CDS;gene=bioD;go_function=magnesium ion binding|0000287||IEA,dethiobiotin synthase activity|0004141||IEA,ATP binding|0005524||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019453993.1;locus_tag=IY40_RS04115;product=dethiobiotin synthase;protein_id=WP_043136683.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 92929 93651 . - . ID=gene-IY40_RS04120;Name=IY40_RS04120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS04120;old_locus_tag=IY40_04180 NZ_JPQY01000005.1 Protein Homology CDS 92929 93651 . - 0 ID=cds-WP_043136687.1;Parent=gene-IY40_RS04120;Dbxref=GenBank:WP_043136687.1;Name=WP_043136687.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019453992.1;locus_tag=IY40_RS04120;product=ATP-binding cassette domain-containing protein;protein_id=WP_043136687.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 94110 94232 . + . ID=gene-IY40_RS26620;Name=IY40_RS26620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS26620 NZ_JPQY01000005.1 GeneMarkS-2+ CDS 94110 94232 . + 0 ID=cds-WP_255703093.1;Parent=gene-IY40_RS26620;Dbxref=GenBank:WP_255703093.1;Name=WP_255703093.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IY40_RS26620;product=hypothetical protein;protein_id=WP_255703093.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 94764 96776 . + . ID=gene-IY40_RS04130;Name=uvrB;gbkey=Gene;gene=uvrB;gene_biotype=protein_coding;locus_tag=IY40_RS04130;old_locus_tag=IY40_04190 NZ_JPQY01000005.1 Protein Homology CDS 94764 96776 . + 0 ID=cds-WP_043136693.1;Parent=gene-IY40_RS04130;Dbxref=GenBank:WP_043136693.1;Name=WP_043136693.1;Ontology_term=GO:0006289,GO:0003677,GO:0005524,GO:0016887,GO:0009380;gbkey=CDS;gene=uvrB;go_component=excinuclease repair complex|0009380||IEA;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012005751.1;locus_tag=IY40_RS04130;product=excinuclease ABC subunit UvrB;protein_id=WP_043136693.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 96877 97143 . + . ID=gene-IY40_RS04135;Name=IY40_RS04135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS04135;old_locus_tag=IY40_04195 NZ_JPQY01000005.1 Protein Homology CDS 96877 97143 . + 0 ID=cds-WP_043136696.1;Parent=gene-IY40_RS04135;Dbxref=GenBank:WP_043136696.1;Name=WP_043136696.1;Ontology_term=GO:0003677,GO:0003690;gbkey=CDS;go_function=DNA binding|0003677||IEA,double-stranded DNA binding|0003690||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004939783.1;locus_tag=IY40_RS04135;product=VF530 family protein;protein_id=WP_043136696.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 97150 98067 . - . ID=gene-IY40_RS04140;Name=IY40_RS04140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS04140;old_locus_tag=IY40_04200 NZ_JPQY01000005.1 Protein Homology CDS 97150 98067 . - 0 ID=cds-WP_025301926.1;Parent=gene-IY40_RS04140;Dbxref=GenBank:WP_025301926.1;Name=WP_025301926.1;Ontology_term=GO:0043743,GO:0051287;gbkey=CDS;go_function=LPPG:FO 2-phospho-L-lactate transferase activity|0043743||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004939781.1;locus_tag=IY40_RS04140;product=gluconeogenesis factor YvcK family protein;protein_id=WP_025301926.1;transl_table=11 NZ_JPQY01000005.1 cmsearch riboswitch 98328 98472 . + . ID=id-NZ_JPQY01000005.1:98328..98472;Dbxref=RFAM:RF01055;Note=molybdenum cofactor riboswitch;bound_moiety=molybdenum cofactor;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_JPQY01000005.1 RefSeq gene 98459 99445 . + . ID=gene-IY40_RS04145;Name=moaA;gbkey=Gene;gene=moaA;gene_biotype=protein_coding;locus_tag=IY40_RS04145;old_locus_tag=IY40_04205 NZ_JPQY01000005.1 Protein Homology CDS 98459 99445 . + 0 ID=cds-WP_004939778.1;Parent=gene-IY40_RS04145;Dbxref=GenBank:WP_004939778.1;Name=WP_004939778.1;Ontology_term=GO:0006777,GO:0046872,GO:0051539;gbkey=CDS;gene=moaA;go_function=metal ion binding|0046872||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011094351.1;locus_tag=IY40_RS04145;product=GTP 3'%2C8-cyclase MoaA;protein_id=WP_004939778.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 99470 99985 . + . ID=gene-IY40_RS04150;Name=moaB;gbkey=Gene;gene=moaB;gene_biotype=protein_coding;locus_tag=IY40_RS04150;old_locus_tag=IY40_04210 NZ_JPQY01000005.1 Protein Homology CDS 99470 99985 . + 0 ID=cds-WP_025301928.1;Parent=gene-IY40_RS04150;Dbxref=GenBank:WP_025301928.1;Name=WP_025301928.1;Ontology_term=GO:0006777,GO:0003824;gbkey=CDS;gene=moaB;go_function=catalytic activity|0003824||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019453987.1;locus_tag=IY40_RS04150;product=molybdenum cofactor biosynthesis protein B;protein_id=WP_025301928.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 99989 100468 . + . ID=gene-IY40_RS04155;Name=moaC;gbkey=Gene;gene=moaC;gene_biotype=protein_coding;locus_tag=IY40_RS04155;old_locus_tag=IY40_04215 NZ_JPQY01000005.1 Protein Homology CDS 99989 100468 . + 0 ID=cds-WP_004939770.1;Parent=gene-IY40_RS04155;Dbxref=GenBank:WP_004939770.1;Name=WP_004939770.1;Ontology_term=GO:0006777,GO:0061799;gbkey=CDS;gene=moaC;go_function=cyclic pyranopterin monophosphate synthase activity|0061799||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004939770.1;locus_tag=IY40_RS04155;product=cyclic pyranopterin monophosphate synthase MoaC;protein_id=WP_004939770.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 100465 100710 . + . ID=gene-IY40_RS04160;Name=moaD;gbkey=Gene;gene=moaD;gene_biotype=protein_coding;locus_tag=IY40_RS04160;old_locus_tag=IY40_04220 NZ_JPQY01000005.1 Protein Homology CDS 100465 100710 . + 0 ID=cds-WP_004939768.1;Parent=gene-IY40_RS04160;Dbxref=GenBank:WP_004939768.1;Name=WP_004939768.1;Ontology_term=GO:0006777;gbkey=CDS;gene=moaD;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706662.2;locus_tag=IY40_RS04160;product=molybdopterin synthase sulfur carrier subunit;protein_id=WP_004939768.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 100713 101180 . + . ID=gene-IY40_RS04165;Name=moaE;gbkey=Gene;gene=moaE;gene_biotype=protein_coding;locus_tag=IY40_RS04165;old_locus_tag=IY40_04225 NZ_JPQY01000005.1 Protein Homology CDS 100713 101180 . + 0 ID=cds-WP_004939764.1;Parent=gene-IY40_RS04165;Dbxref=GenBank:WP_004939764.1;Name=WP_004939764.1;Ontology_term=GO:0006777;gbkey=CDS;gene=moaE;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016928678.1;locus_tag=IY40_RS04165;product=molybdopterin synthase catalytic subunit MoaE;protein_id=WP_004939764.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 101311 102021 . + . ID=gene-IY40_RS04170;Name=IY40_RS04170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS04170;old_locus_tag=IY40_04230 NZ_JPQY01000005.1 Protein Homology CDS 101311 102021 . + 0 ID=cds-WP_033637508.1;Parent=gene-IY40_RS04170;Dbxref=GenBank:WP_033637508.1;Name=WP_033637508.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210775.1;locus_tag=IY40_RS04170;product=Bax inhibitor-1/YccA family protein;protein_id=WP_033637508.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 102092 103198 . - . ID=gene-IY40_RS04175;Name=IY40_RS04175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS04175;old_locus_tag=IY40_04235 NZ_JPQY01000005.1 Protein Homology CDS 102092 103198 . - 0 ID=cds-WP_043136705.1;Parent=gene-IY40_RS04175;Dbxref=GenBank:WP_043136705.1;Name=WP_043136705.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004713409.1;locus_tag=IY40_RS04175;product=ABC transporter permease;protein_id=WP_043136705.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 103211 104365 . - . ID=gene-IY40_RS04180;Name=IY40_RS04180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS04180;old_locus_tag=IY40_04240 NZ_JPQY01000005.1 Protein Homology CDS 103211 104365 . - 0 ID=cds-WP_043136708.1;Parent=gene-IY40_RS04180;Dbxref=GenBank:WP_043136708.1;Name=WP_043136708.1;Ontology_term=GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015377020.1;locus_tag=IY40_RS04180;product=ABC transporter permease;protein_id=WP_043136708.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 104362 106098 . - . ID=gene-IY40_RS04185;Name=IY40_RS04185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS04185;old_locus_tag=IY40_04245 NZ_JPQY01000005.1 Protein Homology CDS 104362 106098 . - 0 ID=cds-WP_043136711.1;Parent=gene-IY40_RS04185;Dbxref=GenBank:WP_043136711.1;Name=WP_043136711.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004939752.1;locus_tag=IY40_RS04185;product=ATP-binding cassette domain-containing protein;protein_id=WP_043136711.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 106107 107093 . - . ID=gene-IY40_RS04190;Name=hlyD;gbkey=Gene;gene=hlyD;gene_biotype=protein_coding;locus_tag=IY40_RS04190;old_locus_tag=IY40_04250 NZ_JPQY01000005.1 Protein Homology CDS 106107 107093 . - 0 ID=cds-WP_043136715.1;Parent=gene-IY40_RS04190;Dbxref=GenBank:WP_043136715.1;Name=WP_043136715.1;gbkey=CDS;gene=hlyD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016928674.1;locus_tag=IY40_RS04190;product=secretion protein HlyD;protein_id=WP_043136715.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 107112 107810 . - . ID=gene-IY40_RS04195;Name=cecR;gbkey=Gene;gene=cecR;gene_biotype=protein_coding;locus_tag=IY40_RS04195;old_locus_tag=IY40_04255 NZ_JPQY01000005.1 Protein Homology CDS 107112 107810 . - 0 ID=cds-WP_043136718.1;Parent=gene-IY40_RS04195;Dbxref=GenBank:WP_043136718.1;Name=WP_043136718.1;gbkey=CDS;gene=cecR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019453978.1;locus_tag=IY40_RS04195;product=transcriptional regulator CecR;protein_id=WP_043136718.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 108108 109487 . + . ID=gene-IY40_RS04200;Name=rhlE;gbkey=Gene;gene=rhlE;gene_biotype=protein_coding;locus_tag=IY40_RS04200;old_locus_tag=IY40_04260 NZ_JPQY01000005.1 Protein Homology CDS 108108 109487 . + 0 ID=cds-WP_025301932.1;Parent=gene-IY40_RS04200;Dbxref=GenBank:WP_025301932.1;Name=WP_025301932.1;Ontology_term=GO:0003724;gbkey=CDS;gene=rhlE;go_function=RNA helicase activity|0003724||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015377024.1;locus_tag=IY40_RS04200;product=ATP-dependent RNA helicase RhlE;protein_id=WP_025301932.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 109602 110561 . + . ID=gene-IY40_RS04205;Name=IY40_RS04205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS04205;old_locus_tag=IY40_04265 NZ_JPQY01000005.1 Protein Homology CDS 109602 110561 . + 0 ID=cds-WP_043136722.1;Parent=gene-IY40_RS04205;Dbxref=GenBank:WP_043136722.1;Name=WP_043136722.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015377025.1;locus_tag=IY40_RS04205;product=D-2-hydroxyacid dehydrogenase family protein;protein_id=WP_043136722.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 110646 111578 . + . ID=gene-IY40_RS04210;Name=dusC;gbkey=Gene;gene=dusC;gene_biotype=protein_coding;locus_tag=IY40_RS04210;old_locus_tag=IY40_04270 NZ_JPQY01000005.1 Protein Homology CDS 110646 111578 . + 0 ID=cds-WP_025301934.1;Parent=gene-IY40_RS04210;Dbxref=GenBank:WP_025301934.1;Name=WP_025301934.1;Ontology_term=GO:0002943,GO:0017150,GO:0050660;gbkey=CDS;gene=dusC;go_function=tRNA dihydrouridine synthase activity|0017150||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA dihydrouridine synthesis|0002943||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015377026.1;locus_tag=IY40_RS04210;product=tRNA dihydrouridine(16) synthase DusC;protein_id=WP_025301934.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 111620 111886 . - . ID=gene-IY40_RS04215;Name=IY40_RS04215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS04215;old_locus_tag=IY40_04275 NZ_JPQY01000005.1 Protein Homology CDS 111620 111886 . - 0 ID=cds-WP_004939738.1;Parent=gene-IY40_RS04215;Dbxref=GenBank:WP_004939738.1;Name=WP_004939738.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004939738.1;locus_tag=IY40_RS04215;product=hypothetical protein;protein_id=WP_004939738.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 112133 113179 . - . ID=gene-IY40_RS04220;Name=fbpC;gbkey=Gene;gene=fbpC;gene_biotype=protein_coding;locus_tag=IY40_RS04220;old_locus_tag=IY40_04280 NZ_JPQY01000005.1 Protein Homology CDS 112133 113179 . - 0 ID=cds-WP_043136726.1;Parent=gene-IY40_RS04220;Dbxref=GenBank:WP_043136726.1;Name=WP_043136726.1;Ontology_term=GO:0055085,GO:0005524,GO:0022857,GO:0016020,GO:0043190;gbkey=CDS;gene=fbpC;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308440.2;locus_tag=IY40_RS04220;product=ferric ABC transporter ATP-binding protein;protein_id=WP_043136726.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 113191 115269 . - . ID=gene-IY40_RS04225;Name=IY40_RS04225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS04225;old_locus_tag=IY40_04285 NZ_JPQY01000005.1 Protein Homology CDS 113191 115269 . - 0 ID=cds-WP_043136731.1;Parent=gene-IY40_RS04225;Dbxref=GenBank:WP_043136731.1;Name=WP_043136731.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308441.1;locus_tag=IY40_RS04225;product=ABC transporter permease;protein_id=WP_043136731.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 115337 116368 . - . ID=gene-IY40_RS04230;Name=IY40_RS04230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS04230;old_locus_tag=IY40_04290 NZ_JPQY01000005.1 Protein Homology CDS 115337 116368 . - 0 ID=cds-WP_043136733.1;Parent=gene-IY40_RS04230;Dbxref=GenBank:WP_043136733.1;Name=WP_043136733.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308442.1;locus_tag=IY40_RS04230;product=ABC transporter substrate-binding protein;protein_id=WP_043136733.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 116365 117693 . - . ID=gene-IY40_RS04235;Name=uhpC;gbkey=Gene;gene=uhpC;gene_biotype=protein_coding;locus_tag=IY40_RS04235;old_locus_tag=IY40_04295 NZ_JPQY01000005.1 Protein Homology CDS 116365 117693 . - 0 ID=cds-WP_227257841.1;Parent=gene-IY40_RS04235;Dbxref=GenBank:WP_227257841.1;Name=WP_227257841.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=uhpC;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001312597.1;locus_tag=IY40_RS04235;product=MFS transporter family glucose-6-phosphate receptor UhpC;protein_id=WP_227257841.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 117754 119295 . - . ID=gene-IY40_RS04240;Name=IY40_RS04240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS04240;old_locus_tag=IY40_04300 NZ_JPQY01000005.1 Protein Homology CDS 117754 119295 . - 0 ID=cds-WP_043136740.1;Parent=gene-IY40_RS04240;Dbxref=GenBank:WP_043136740.1;Name=WP_043136740.1;Ontology_term=GO:0007165,GO:0000155,GO:0004673,GO:0005524;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015377032.1;locus_tag=IY40_RS04240;product=MASE1 domain-containing sensor histidine kinase;protein_id=WP_043136740.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 119295 119924 . - . ID=gene-IY40_RS04245;Name=IY40_RS04245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS04245;old_locus_tag=IY40_04305 NZ_JPQY01000005.1 Protein Homology CDS 119295 119924 . - 0 ID=cds-WP_025301940.1;Parent=gene-IY40_RS04245;Dbxref=GenBank:WP_025301940.1;Name=WP_025301940.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308445.1;locus_tag=IY40_RS04245;product=response regulator transcription factor;protein_id=WP_025301940.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 120047 120811 . - . ID=gene-IY40_RS04250;Name=IY40_RS04250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS04250;old_locus_tag=IY40_04310 NZ_JPQY01000005.1 Protein Homology CDS 120047 120811 . - 0 ID=cds-WP_043136743.1;Parent=gene-IY40_RS04250;Dbxref=GenBank:WP_043136743.1;Name=WP_043136743.1;Ontology_term=GO:0016407;gbkey=CDS;go_function=acetyltransferase activity|0016407||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019453968.1;locus_tag=IY40_RS04250;product=arylamine N-acetyltransferase family protein;protein_id=WP_043136743.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 120970 121590 . + . ID=gene-IY40_RS04255;Name=IY40_RS04255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS04255;old_locus_tag=IY40_04315 NZ_JPQY01000005.1 Protein Homology CDS 120970 121590 . + 0 ID=cds-WP_043136747.1;Parent=gene-IY40_RS04255;Dbxref=GenBank:WP_043136747.1;Name=WP_043136747.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004939713.1;locus_tag=IY40_RS04255;product=HD domain-containing protein;protein_id=WP_043136747.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 121550 122434 . - . ID=gene-IY40_RS04260;Name=IY40_RS04260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS04260;old_locus_tag=IY40_04320 NZ_JPQY01000005.1 Protein Homology CDS 121550 122434 . - 0 ID=cds-WP_230203377.1;Parent=gene-IY40_RS04260;Dbxref=GenBank:WP_230203377.1;Name=WP_230203377.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004939710.1;locus_tag=IY40_RS04260;product=AEC family transporter;protein_id=WP_230203377.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 122490 123227 . - . ID=gene-IY40_RS04265;Name=IY40_RS04265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS04265;old_locus_tag=IY40_04325 NZ_JPQY01000005.1 Protein Homology CDS 122490 123227 . - 0 ID=cds-WP_230203376.1;Parent=gene-IY40_RS04265;Dbxref=GenBank:WP_230203376.1;Name=WP_230203376.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004939707.1;locus_tag=IY40_RS04265;product=TSUP family transporter;protein_id=WP_230203376.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 123224 124657 . - . ID=gene-IY40_RS04270;Name=pyk;gbkey=Gene;gene=pyk;gene_biotype=protein_coding;locus_tag=IY40_RS04270;old_locus_tag=IY40_04330 NZ_JPQY01000005.1 Protein Homology CDS 123224 124657 . - 0 ID=cds-WP_043136757.1;Parent=gene-IY40_RS04270;Dbxref=GenBank:WP_043136757.1;Name=WP_043136757.1;Ontology_term=GO:0006096,GO:0000287,GO:0004743,GO:0030955;gbkey=CDS;gene=pyk;go_function=magnesium ion binding|0000287||IEA,pyruvate kinase activity|0004743||IEA,potassium ion binding|0030955||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015377038.1;locus_tag=IY40_RS04270;product=pyruvate kinase;protein_id=WP_043136757.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 124961 125713 . + . ID=gene-IY40_RS04275;Name=IY40_RS04275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS04275;old_locus_tag=IY40_04335 NZ_JPQY01000005.1 Protein Homology CDS 124961 125713 . + 0 ID=cds-WP_043136760.1;Parent=gene-IY40_RS04275;Dbxref=GenBank:WP_043136760.1;Name=WP_043136760.1;Ontology_term=GO:0016491,GO:0070403;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004248416.1;locus_tag=IY40_RS04275;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_043136760.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 125746 127566 . - . ID=gene-IY40_RS04280;Name=IY40_RS04280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS04280;old_locus_tag=IY40_04340 NZ_JPQY01000005.1 Protein Homology CDS 125746 127566 . - 0 ID=cds-WP_043136763.1;Parent=gene-IY40_RS04280;Dbxref=GenBank:WP_043136763.1;Name=WP_043136763.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013811978.1;locus_tag=IY40_RS04280;product=hypothetical protein;protein_id=WP_043136763.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 127764 128663 . - . ID=gene-IY40_RS04285;Name=IY40_RS04285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS04285;old_locus_tag=IY40_04345 NZ_JPQY01000005.1 Protein Homology CDS 127764 128663 . - 0 ID=cds-WP_043136764.1;Parent=gene-IY40_RS04285;Dbxref=GenBank:WP_043136764.1;Name=WP_043136764.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013811981.1;locus_tag=IY40_RS04285;product=LysR substrate-binding domain-containing protein;protein_id=WP_043136764.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 128780 129559 . + . ID=gene-IY40_RS04290;Name=IY40_RS04290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS04290;old_locus_tag=IY40_04350 NZ_JPQY01000005.1 Protein Homology CDS 128780 129559 . + 0 ID=cds-WP_025301944.1;Parent=gene-IY40_RS04290;Dbxref=GenBank:WP_025301944.1;Name=WP_025301944.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004939699.1;locus_tag=IY40_RS04290;product=HalD/BesD family halogenase;protein_id=WP_025301944.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 129597 131063 . - . ID=gene-IY40_RS04295;Name=ansP;gbkey=Gene;gene=ansP;gene_biotype=protein_coding;locus_tag=IY40_RS04295;old_locus_tag=IY40_04355 NZ_JPQY01000005.1 Protein Homology CDS 129597 131063 . - 0 ID=cds-WP_025301945.1;Parent=gene-IY40_RS04295;Dbxref=GenBank:WP_025301945.1;Name=WP_025301945.1;Ontology_term=GO:0006865,GO:0016020;gbkey=CDS;gene=ansP;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004939697.1;locus_tag=IY40_RS04295;product=L-asparagine permease;protein_id=WP_025301945.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 131501 131938 . - . ID=gene-IY40_RS04300;Name=IY40_RS04300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS04300;old_locus_tag=IY40_04360 NZ_JPQY01000005.1 Protein Homology CDS 131501 131938 . - 0 ID=cds-WP_004939694.1;Parent=gene-IY40_RS04300;Dbxref=GenBank:WP_004939694.1;Name=WP_004939694.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016928654.1;locus_tag=IY40_RS04300;product=PACE efflux transporter;protein_id=WP_004939694.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 132051 132944 . + . ID=gene-IY40_RS04305;Name=IY40_RS04305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS04305;old_locus_tag=IY40_04365 NZ_JPQY01000005.1 Protein Homology CDS 132051 132944 . + 0 ID=cds-WP_025301946.1;Parent=gene-IY40_RS04305;Dbxref=GenBank:WP_025301946.1;Name=WP_025301946.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016928653.1;locus_tag=IY40_RS04305;product=LysR family transcriptional regulator;protein_id=WP_025301946.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 132961 133524 . - . ID=gene-IY40_RS04310;Name=IY40_RS04310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS04310;old_locus_tag=IY40_04370 NZ_JPQY01000005.1 Protein Homology CDS 132961 133524 . - 0 ID=cds-WP_025301947.1;Parent=gene-IY40_RS04310;Dbxref=GenBank:WP_025301947.1;Name=WP_025301947.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015377041.1;locus_tag=IY40_RS04310;product=DedA family protein;protein_id=WP_025301947.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 133575 134252 . - . ID=gene-IY40_RS04315;Name=IY40_RS04315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS04315;old_locus_tag=IY40_04375 NZ_JPQY01000005.1 Protein Homology CDS 133575 134252 . - 0 ID=cds-WP_025301948.1;Parent=gene-IY40_RS04315;Dbxref=GenBank:WP_025301948.1;Name=WP_025301948.1;Ontology_term=GO:0016829;gbkey=CDS;go_function=lyase activity|0016829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004939688.1;locus_tag=IY40_RS04315;product=DJ-1/PfpI family protein;protein_id=WP_025301948.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 134344 135288 . + . ID=gene-IY40_RS04320;Name=IY40_RS04320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS04320;old_locus_tag=IY40_04380 NZ_JPQY01000005.1 Protein Homology CDS 134344 135288 . + 0 ID=cds-WP_043136768.1;Parent=gene-IY40_RS04320;Dbxref=GenBank:WP_043136768.1;Name=WP_043136768.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015377043.1;locus_tag=IY40_RS04320;product=GlxA family transcriptional regulator;protein_id=WP_043136768.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 135333 136436 . + . ID=gene-IY40_RS04325;Name=IY40_RS04325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS04325;old_locus_tag=IY40_04385 NZ_JPQY01000005.1 Protein Homology CDS 135333 136436 . + 0 ID=cds-WP_025301950.1;Parent=gene-IY40_RS04325;Dbxref=GenBank:WP_025301950.1;Name=WP_025301950.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004941972.1;locus_tag=IY40_RS04325;product=adenosylhomocysteinase;protein_id=WP_025301950.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 136588 137517 . + . ID=gene-IY40_RS04330;Name=pbpG;gbkey=Gene;gene=pbpG;gene_biotype=protein_coding;locus_tag=IY40_RS04330;old_locus_tag=IY40_04390 NZ_JPQY01000005.1 Protein Homology CDS 136588 137517 . + 0 ID=cds-WP_025301951.1;Parent=gene-IY40_RS04330;Dbxref=GenBank:WP_025301951.1;Name=WP_025301951.1;Ontology_term=GO:0006508,GO:0009002;gbkey=CDS;gene=pbpG;go_function=serine-type D-Ala-D-Ala carboxypeptidase activity|0009002||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017892020.1;locus_tag=IY40_RS04330;product=D-alanyl-D-alanine endopeptidase;protein_id=WP_025301951.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 137552 138007 . - . ID=gene-IY40_RS04335;Name=IY40_RS04335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS04335;old_locus_tag=IY40_04395 NZ_JPQY01000005.1 Protein Homology CDS 137552 138007 . - 0 ID=cds-WP_043136772.1;Parent=gene-IY40_RS04335;Dbxref=GenBank:WP_043136772.1;Name=WP_043136772.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015377046.1;locus_tag=IY40_RS04335;product=GNAT family N-acetyltransferase;protein_id=WP_043136772.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 138084 138488 . + . ID=gene-IY40_RS04340;Name=IY40_RS04340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS04340;old_locus_tag=IY40_04400 NZ_JPQY01000005.1 Protein Homology CDS 138084 138488 . + 0 ID=cds-WP_043136775.1;Parent=gene-IY40_RS04340;Dbxref=GenBank:WP_043136775.1;Name=WP_043136775.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019453955.1;locus_tag=IY40_RS04340;product=VOC family protein;protein_id=WP_043136775.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 138609 139037 . + . ID=gene-IY40_RS26455;Name=IY40_RS26455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS26455 NZ_JPQY01000005.1 Protein Homology CDS 138609 139037 . + 0 ID=cds-WP_235211357.1;Parent=gene-IY40_RS26455;Dbxref=GenBank:WP_235211357.1;Name=WP_235211357.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: protein motif:HMM:NF023568.7;locus_tag=IY40_RS26455;product=alpha/beta hydrolase;protein_id=WP_235211357.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 139056 139514 . + . ID=gene-IY40_RS26460;Name=IY40_RS26460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS26460 NZ_JPQY01000005.1 GeneMarkS-2+ CDS 139056 139514 . + 0 ID=cds-WP_235211358.1;Parent=gene-IY40_RS26460;Dbxref=GenBank:WP_235211358.1;Name=WP_235211358.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IY40_RS26460;product=hypothetical protein;protein_id=WP_235211358.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 139699 140703 . + . ID=gene-IY40_RS04350;Name=IY40_RS04350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS04350;old_locus_tag=IY40_04410 NZ_JPQY01000005.1 Protein Homology CDS 139699 140703 . + 0 ID=cds-WP_025301958.1;Parent=gene-IY40_RS04350;Dbxref=GenBank:WP_025301958.1;Name=WP_025301958.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019453953.1;locus_tag=IY40_RS04350;product=TauD/TfdA family dioxygenase;protein_id=WP_025301958.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 140715 141632 . + . ID=gene-IY40_RS04355;Name=IY40_RS04355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS04355;old_locus_tag=IY40_04415 NZ_JPQY01000005.1 Protein Homology CDS 140715 141632 . + 0 ID=cds-WP_025301959.1;Parent=gene-IY40_RS04355;Dbxref=GenBank:WP_025301959.1;Name=WP_025301959.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019453952.1;locus_tag=IY40_RS04355;product=AEC family transporter;protein_id=WP_025301959.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 141755 142675 . + . ID=gene-IY40_RS04360;Name=IY40_RS04360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS04360;old_locus_tag=IY40_04420 NZ_JPQY01000005.1 Protein Homology CDS 141755 142675 . + 0 ID=cds-WP_025301960.1;Parent=gene-IY40_RS04360;Dbxref=GenBank:WP_025301960.1;Name=WP_025301960.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006324208.1;locus_tag=IY40_RS04360;product=DUF808 domain-containing protein;protein_id=WP_025301960.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 142718 142801 . - . ID=gene-IY40_RS26695;Name=IY40_RS26695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS26695 NZ_JPQY01000005.1 Protein Homology CDS 142718 142801 . - 0 ID=cds-WP_016928643.1;Parent=gene-IY40_RS26695;Dbxref=GenBank:WP_016928643.1;Name=WP_016928643.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF052141.1;locus_tag=IY40_RS26695;product=small membrane protein YohP;protein_id=WP_016928643.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 142905 143444 . - . ID=gene-IY40_RS04365;Name=IY40_RS04365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS04365;old_locus_tag=IY40_04430 NZ_JPQY01000005.1 Protein Homology CDS 142905 143444 . - 0 ID=cds-WP_025301961.1;Parent=gene-IY40_RS04365;Dbxref=GenBank:WP_025301961.1;Name=WP_025301961.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004941977.1;locus_tag=IY40_RS04365;product=GNAT family N-acetyltransferase;protein_id=WP_025301961.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 143557 144582 . - . ID=gene-IY40_RS04370;Name=IY40_RS04370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS04370;old_locus_tag=IY40_04435 NZ_JPQY01000005.1 Protein Homology CDS 143557 144582 . - 0 ID=cds-WP_025301962.1;Parent=gene-IY40_RS04370;Dbxref=GenBank:WP_025301962.1;Name=WP_025301962.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006324212.1;locus_tag=IY40_RS04370;product=MerR family transcriptional regulator;protein_id=WP_025301962.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 144816 145265 . - . ID=gene-IY40_RS04375;Name=IY40_RS04375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS04375;old_locus_tag=IY40_04440 NZ_JPQY01000005.1 Protein Homology CDS 144816 145265 . - 0 ID=cds-WP_004939660.1;Parent=gene-IY40_RS04375;Dbxref=GenBank:WP_004939660.1;Name=WP_004939660.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004939660.1;locus_tag=IY40_RS04375;product=type II toxin-antitoxin system PemK/MazF family toxin;protein_id=WP_004939660.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 145418 146230 . - . ID=gene-IY40_RS04380;Name=IY40_RS04380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS04380;old_locus_tag=IY40_04445 NZ_JPQY01000005.1 Protein Homology CDS 145418 146230 . - 0 ID=cds-WP_025301963.1;Parent=gene-IY40_RS04380;Dbxref=GenBank:WP_025301963.1;Name=WP_025301963.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004939656.1;locus_tag=IY40_RS04380;product=MetQ/NlpA family lipoprotein;protein_id=WP_025301963.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 146360 147211 . - . ID=gene-IY40_RS04385;Name=IY40_RS04385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS04385;old_locus_tag=IY40_04450 NZ_JPQY01000005.1 Protein Homology CDS 146360 147211 . - 0 ID=cds-WP_043136781.1;Parent=gene-IY40_RS04385;Dbxref=GenBank:WP_043136781.1;Name=WP_043136781.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016928640.1;locus_tag=IY40_RS04385;product=DUF1460 domain-containing protein;protein_id=WP_043136781.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 147316 147858 . - . ID=gene-IY40_RS04390;Name=IY40_RS04390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS04390;old_locus_tag=IY40_04455 NZ_JPQY01000005.1 Protein Homology CDS 147316 147858 . - 0 ID=cds-WP_043136785.1;Parent=gene-IY40_RS04390;Dbxref=GenBank:WP_043136785.1;Name=WP_043136785.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004939648.1;locus_tag=IY40_RS04390;product=GNAT family N-acetyltransferase;protein_id=WP_043136785.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 147858 148325 . - . ID=gene-IY40_RS04395;Name=IY40_RS04395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS04395;old_locus_tag=IY40_04460 NZ_JPQY01000005.1 Protein Homology CDS 147858 148325 . - 0 ID=cds-WP_025301966.1;Parent=gene-IY40_RS04395;Dbxref=GenBank:WP_025301966.1;Name=WP_025301966.1;Ontology_term=GO:0016740;gbkey=CDS;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004939644.1;locus_tag=IY40_RS04395;product=acyltransferase;protein_id=WP_025301966.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 148531 149121 . + . ID=gene-IY40_RS04400;Name=IY40_RS04400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS04400;old_locus_tag=IY40_04465 NZ_JPQY01000005.1 Protein Homology CDS 148531 149121 . + 0 ID=cds-WP_019453944.1;Parent=gene-IY40_RS04400;Dbxref=GenBank:WP_019453944.1;Name=WP_019453944.1;Ontology_term=GO:0016192,GO:0031267;gbkey=CDS;go_function=small GTPase binding|0031267||IEA;go_process=vesicle-mediated transport|0016192||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004939641.1;locus_tag=IY40_RS04400;product=Yip1 family protein;protein_id=WP_019453944.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 149176 150027 . - . ID=gene-IY40_RS04405;Name=IY40_RS04405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS04405;old_locus_tag=IY40_04470 NZ_JPQY01000005.1 Protein Homology CDS 149176 150027 . - 0 ID=cds-WP_043136788.1;Parent=gene-IY40_RS04405;Dbxref=GenBank:WP_043136788.1;Name=WP_043136788.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015377055.1;locus_tag=IY40_RS04405;product=DMT family transporter;protein_id=WP_043136788.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 150271 150561 . - . ID=gene-IY40_RS25875;Name=IY40_RS25875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS25875 NZ_JPQY01000005.1 GeneMarkS-2+ CDS 150271 150561 . - 0 ID=cds-WP_152561288.1;Parent=gene-IY40_RS25875;Dbxref=GenBank:WP_152561288.1;Name=WP_152561288.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IY40_RS25875;product=hypothetical protein;protein_id=WP_152561288.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 150626 151342 . + . ID=gene-IY40_RS04410;Name=IY40_RS04410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS04410;old_locus_tag=IY40_04475 NZ_JPQY01000005.1 Protein Homology CDS 150626 151342 . + 0 ID=cds-WP_025301969.1;Parent=gene-IY40_RS04410;Dbxref=GenBank:WP_025301969.1;Name=WP_025301969.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019453942.1;locus_tag=IY40_RS04410;product=ABC transporter ATP-binding protein;protein_id=WP_025301969.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 151359 152315 . + . ID=gene-IY40_RS04415;Name=IY40_RS04415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS04415;old_locus_tag=IY40_04480 NZ_JPQY01000005.1 Protein Homology CDS 151359 152315 . + 0 ID=cds-WP_043136793.1;Parent=gene-IY40_RS04415;Dbxref=GenBank:WP_043136793.1;Name=WP_043136793.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015377057.1;locus_tag=IY40_RS04415;product=ABC transporter substrate-binding protein;protein_id=WP_043136793.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 152312 153319 . + . ID=gene-IY40_RS04420;Name=IY40_RS04420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS04420;old_locus_tag=IY40_04485 NZ_JPQY01000005.1 Protein Homology CDS 152312 153319 . + 0 ID=cds-WP_025301971.1;Parent=gene-IY40_RS04420;Dbxref=GenBank:WP_025301971.1;Name=WP_025301971.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004939627.1;locus_tag=IY40_RS04420;product=FecCD family ABC transporter permease;protein_id=WP_025301971.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 153333 154856 . - . ID=gene-IY40_RS04425;Name=IY40_RS04425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS04425;old_locus_tag=IY40_04490 NZ_JPQY01000005.1 Protein Homology CDS 153333 154856 . - 0 ID=cds-WP_043136796.1;Parent=gene-IY40_RS04425;Dbxref=GenBank:WP_043136796.1;Name=WP_043136796.1;Ontology_term=GO:0010181;gbkey=CDS;go_function=FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019453939.1;locus_tag=IY40_RS04425;product=flavodoxin domain-containing protein;protein_id=WP_043136796.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 154862 155287 . - . ID=gene-IY40_RS04430;Name=IY40_RS04430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS04430;old_locus_tag=IY40_04495 NZ_JPQY01000005.1 Protein Homology CDS 154862 155287 . - 0 ID=cds-WP_023447580.1;Parent=gene-IY40_RS04430;Dbxref=GenBank:WP_023447580.1;Name=WP_023447580.1;Ontology_term=GO:0007165,GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019453938.1;locus_tag=IY40_RS04430;product=PAS domain-containing protein;protein_id=WP_023447580.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 155516 157222 . - . ID=gene-IY40_RS04435;Name=dld;gbkey=Gene;gene=dld;gene_biotype=protein_coding;locus_tag=IY40_RS04435;old_locus_tag=IY40_04500 NZ_JPQY01000005.1 Protein Homology CDS 155516 157222 . - 0 ID=cds-WP_043136819.1;Parent=gene-IY40_RS04435;Dbxref=GenBank:WP_043136819.1;Name=WP_043136819.1;Ontology_term=GO:0006089,GO:0016901;gbkey=CDS;gene=dld;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C quinone or similar compound as acceptor|0016901||IEA;go_process=lactate metabolic process|0006089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019453937.1;locus_tag=IY40_RS04435;product=D-lactate dehydrogenase;protein_id=WP_043136819.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 157348 158142 . - . ID=gene-IY40_RS04440;Name=map;gbkey=Gene;gene=map;gene_biotype=protein_coding;locus_tag=IY40_RS04440;old_locus_tag=IY40_04505 NZ_JPQY01000005.1 Protein Homology CDS 157348 158142 . - 0 ID=cds-WP_043136821.1;Parent=gene-IY40_RS04440;Dbxref=GenBank:WP_043136821.1;Name=WP_043136821.1;Ontology_term=GO:0006508,GO:0070006;gbkey=CDS;gene=map;go_function=metalloaminopeptidase activity|0070006||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004942002.1;locus_tag=IY40_RS04440;product=type I methionyl aminopeptidase;protein_id=WP_043136821.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 158139 158342 . - . ID=gene-IY40_RS04445;Name=IY40_RS04445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS04445;old_locus_tag=IY40_04510 NZ_JPQY01000005.1 Protein Homology CDS 158139 158342 . - 0 ID=cds-WP_006324220.1;Parent=gene-IY40_RS04445;Dbxref=GenBank:WP_006324220.1;Name=WP_006324220.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006324220.1;locus_tag=IY40_RS04445;product=ParD-like family protein;protein_id=WP_006324220.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 158512 159615 . + . ID=gene-IY40_RS04450;Name=ddlA;gbkey=Gene;gene=ddlA;gene_biotype=protein_coding;locus_tag=IY40_RS04450;old_locus_tag=IY40_04515 NZ_JPQY01000005.1 Protein Homology CDS 158512 159615 . + 0 ID=cds-WP_015377061.1;Parent=gene-IY40_RS04450;Dbxref=GenBank:WP_015377061.1;Name=WP_015377061.1;Ontology_term=GO:0008716;gbkey=CDS;gene=ddlA;go_function=D-alanine-D-alanine ligase activity|0008716||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015377061.1;locus_tag=IY40_RS04450;product=D-alanine--D-alanine ligase;protein_id=WP_015377061.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 159650 160429 . - . ID=gene-IY40_RS04455;Name=IY40_RS04455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS04455;old_locus_tag=IY40_04520 NZ_JPQY01000005.1 Protein Homology CDS 159650 160429 . - 0 ID=cds-WP_025301975.1;Parent=gene-IY40_RS04455;Dbxref=GenBank:WP_025301975.1;Name=WP_025301975.1;Ontology_term=GO:0006865,GO:0030288,GO:0055052;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013812010.1;locus_tag=IY40_RS04455;product=ABC transporter substrate-binding protein;protein_id=WP_025301975.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 160464 161618 . - . ID=gene-IY40_RS04460;Name=IY40_RS04460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS04460;old_locus_tag=IY40_04525 NZ_JPQY01000005.1 Protein Homology CDS 160464 161618 . - 0 ID=cds-WP_021503974.1;Parent=gene-IY40_RS04460;Dbxref=GenBank:WP_021503974.1;Name=WP_021503974.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012005803.1;locus_tag=IY40_RS04460;product=methionine aminotransferase;protein_id=WP_021503974.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 161737 162657 . + . ID=gene-IY40_RS04465;Name=IY40_RS04465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS04465;old_locus_tag=IY40_04530 NZ_JPQY01000005.1 Protein Homology CDS 161737 162657 . + 0 ID=cds-WP_043136835.1;Parent=gene-IY40_RS04465;Dbxref=GenBank:WP_043136835.1;Name=WP_043136835.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004939608.1;locus_tag=IY40_RS04465;product=LysR substrate-binding domain-containing protein;protein_id=WP_043136835.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 162770 165067 . + . ID=gene-IY40_RS04470;Name=bglX;gbkey=Gene;gene=bglX;gene_biotype=protein_coding;locus_tag=IY40_RS04470;old_locus_tag=IY40_04535 NZ_JPQY01000005.1 Protein Homology CDS 162770 165067 . + 0 ID=cds-WP_043136838.1;Parent=gene-IY40_RS04470;Dbxref=GenBank:WP_043136838.1;Name=WP_043136838.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;gene=bglX;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006820830.1;locus_tag=IY40_RS04470;product=beta-glucosidase BglX;protein_id=WP_043136838.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 165143 166066 . + . ID=gene-IY40_RS04475;Name=IY40_RS04475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS04475;old_locus_tag=IY40_04540 NZ_JPQY01000005.1 Protein Homology CDS 165143 166066 . + 0 ID=cds-WP_043136840.1;Parent=gene-IY40_RS04475;Dbxref=GenBank:WP_043136840.1;Name=WP_043136840.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015377066.1;locus_tag=IY40_RS04475;product=DUF7916 family protein;protein_id=WP_043136840.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 167038 167430 . + . ID=gene-IY40_RS04480;Name=IY40_RS04480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS04480;old_locus_tag=IY40_04545 NZ_JPQY01000005.1 Protein Homology CDS 167038 167430 . + 0 ID=cds-WP_025301979.1;Parent=gene-IY40_RS04480;Dbxref=GenBank:WP_025301979.1;Name=WP_025301979.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004939596.1;locus_tag=IY40_RS04480;product=hypothetical protein;protein_id=WP_025301979.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 167617 168666 . + . ID=gene-IY40_RS04485;Name=IY40_RS04485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS04485;old_locus_tag=IY40_04550 NZ_JPQY01000005.1 Protein Homology CDS 167617 168666 . + 0 ID=cds-WP_025301980.1;Parent=gene-IY40_RS04485;Dbxref=GenBank:WP_025301980.1;Name=WP_025301980.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019453928.1;locus_tag=IY40_RS04485;product=ABC transporter substrate-binding protein;protein_id=WP_025301980.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 168663 169664 . + . ID=gene-IY40_RS04490;Name=IY40_RS04490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS04490;old_locus_tag=IY40_04555 NZ_JPQY01000005.1 Protein Homology CDS 168663 169664 . + 0 ID=cds-WP_043136843.1;Parent=gene-IY40_RS04490;Dbxref=GenBank:WP_043136843.1;Name=WP_043136843.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019453927.1;locus_tag=IY40_RS04490;product=FecCD family ABC transporter permease;protein_id=WP_043136843.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 169657 170436 . + . ID=gene-IY40_RS04495;Name=IY40_RS04495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS04495;old_locus_tag=IY40_04560 NZ_JPQY01000005.1 Protein Homology CDS 169657 170436 . + 0 ID=cds-WP_043136845.1;Parent=gene-IY40_RS04495;Dbxref=GenBank:WP_043136845.1;Name=WP_043136845.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012005808.1;locus_tag=IY40_RS04495;product=ABC transporter ATP-binding protein;protein_id=WP_043136845.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 170429 171154 . + . ID=gene-IY40_RS04500;Name=IY40_RS04500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS04500;old_locus_tag=IY40_04565 NZ_JPQY01000005.1 Protein Homology CDS 170429 171154 . + 0 ID=cds-WP_025301983.1;Parent=gene-IY40_RS04500;Dbxref=GenBank:WP_025301983.1;Name=WP_025301983.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019453924.1;locus_tag=IY40_RS04500;product=substrate-binding domain-containing protein;protein_id=WP_025301983.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 171183 171983 . - . ID=gene-IY40_RS04505;Name=IY40_RS04505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS04505;old_locus_tag=IY40_04570 NZ_JPQY01000005.1 Protein Homology CDS 171183 171983 . - 0 ID=cds-WP_080287109.1;Parent=gene-IY40_RS04505;Dbxref=GenBank:WP_080287109.1;Name=WP_080287109.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016928623.1;locus_tag=IY40_RS04505;product=alpha/beta fold hydrolase;protein_id=WP_080287109.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 172222 172977 . + . ID=gene-IY40_RS04510;Name=IY40_RS04510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS04510;old_locus_tag=IY40_04575 NZ_JPQY01000005.1 Protein Homology CDS 172222 172977 . + 0 ID=cds-WP_043136850.1;Parent=gene-IY40_RS04510;Dbxref=GenBank:WP_043136850.1;Name=WP_043136850.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015377069.1;locus_tag=IY40_RS04510;product=CDP-diacylglycerol diphosphatase;protein_id=WP_043136850.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 173146 173670 . + . ID=gene-IY40_RS04515;Name=IY40_RS04515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS04515 NZ_JPQY01000005.1 Protein Homology CDS 173146 173670 . + 0 ID=cds-WP_049208938.1;Parent=gene-IY40_RS04515;Dbxref=GenBank:WP_049208938.1;Name=WP_049208938.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:NF024854.6;locus_tag=IY40_RS04515;product=MarR family winged helix-turn-helix transcriptional regulator;protein_id=WP_049208938.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 173667 174998 . + . ID=gene-IY40_RS04520;Name=IY40_RS04520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS04520;old_locus_tag=IY40_04585 NZ_JPQY01000005.1 Protein Homology CDS 173667 174998 . + 0 ID=cds-WP_043136852.1;Parent=gene-IY40_RS04520;Dbxref=GenBank:WP_043136852.1;Name=WP_043136852.1;Ontology_term=GO:0009055,GO:0020037,GO:0046872;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017374575.1;locus_tag=IY40_RS04520;product=c-type cytochrome;protein_id=WP_043136852.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 175015 175467 . + . ID=gene-IY40_RS04525;Name=IY40_RS04525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS04525;old_locus_tag=IY40_04590 NZ_JPQY01000005.1 Protein Homology CDS 175015 175467 . + 0 ID=cds-WP_043136855.1;Parent=gene-IY40_RS04525;Dbxref=GenBank:WP_043136855.1;Name=WP_043136855.1;Ontology_term=GO:0046872,GO:0051536,GO:0051537;gbkey=CDS;go_function=metal ion binding|0046872||IEA,iron-sulfur cluster binding|0051536||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019453919.1;locus_tag=IY40_RS04525;product=(2Fe-2S)-binding protein;protein_id=WP_043136855.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 175470 177713 . + . ID=gene-IY40_RS04530;Name=IY40_RS04530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS04530;old_locus_tag=IY40_04595 NZ_JPQY01000005.1 Protein Homology CDS 175470 177713 . + 0 ID=cds-WP_043136859.1;Parent=gene-IY40_RS04530;Dbxref=GenBank:WP_043136859.1;Name=WP_043136859.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019453918.1;locus_tag=IY40_RS04530;product=xanthine dehydrogenase family protein molybdopterin-binding subunit;protein_id=WP_043136859.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 177754 178056 . - . ID=gene-IY40_RS04535;Name=IY40_RS04535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS04535;old_locus_tag=IY40_04600 NZ_JPQY01000005.1 Protein Homology CDS 177754 178056 . - 0 ID=cds-WP_033642294.1;Parent=gene-IY40_RS04535;Dbxref=GenBank:WP_033642294.1;Name=WP_033642294.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004942032.1;locus_tag=IY40_RS04535;product=hypothetical protein;protein_id=WP_033642294.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 178053 178688 . - . ID=gene-IY40_RS04540;Name=IY40_RS04540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS04540;old_locus_tag=IY40_04605 NZ_JPQY01000005.1 Protein Homology CDS 178053 178688 . - 0 ID=cds-WP_025301991.1;Parent=gene-IY40_RS04540;Dbxref=GenBank:WP_025301991.1;Name=WP_025301991.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016928620.1;locus_tag=IY40_RS04540;product=AAA family ATPase;protein_id=WP_025301991.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 178961 179302 . - . ID=gene-IY40_RS04545;Name=yajD;gbkey=Gene;gene=yajD;gene_biotype=protein_coding;locus_tag=IY40_RS04545;old_locus_tag=IY40_04610 NZ_JPQY01000005.1 Protein Homology CDS 178961 179302 . - 0 ID=cds-WP_004939576.1;Parent=gene-IY40_RS04545;Dbxref=GenBank:WP_004939576.1;Name=WP_004939576.1;gbkey=CDS;gene=yajD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005189583.1;locus_tag=IY40_RS04545;product=HNH nuclease YajD;protein_id=WP_004939576.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 179357 180274 . - . ID=gene-IY40_RS04550;Name=IY40_RS04550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS04550;old_locus_tag=IY40_04615 NZ_JPQY01000005.1 Protein Homology CDS 179357 180274 . - 0 ID=cds-WP_043136865.1;Parent=gene-IY40_RS04550;Dbxref=GenBank:WP_043136865.1;Name=WP_043136865.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008110187.1;locus_tag=IY40_RS04550;product=LysR family transcriptional regulator;protein_id=WP_043136865.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 180334 181518 . - . ID=gene-IY40_RS04555;Name=IY40_RS04555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS04555;old_locus_tag=IY40_04620 NZ_JPQY01000005.1 Protein Homology CDS 180334 181518 . - 0 ID=cds-WP_043136869.1;Parent=gene-IY40_RS04555;Dbxref=GenBank:WP_043136869.1;Name=WP_043136869.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015377074.1;locus_tag=IY40_RS04555;product=MFS transporter;protein_id=WP_043136869.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 181739 183304 . - . ID=gene-IY40_RS04560;Name=lsrK;gbkey=Gene;gene=lsrK;gene_biotype=protein_coding;locus_tag=IY40_RS04560;old_locus_tag=IY40_04625 NZ_JPQY01000005.1 Protein Homology CDS 181739 183304 . - 0 ID=cds-WP_025301994.1;Parent=gene-IY40_RS04560;Dbxref=GenBank:WP_025301994.1;Name=WP_025301994.1;Ontology_term=GO:0005975,GO:0009372,GO:0071518;gbkey=CDS;gene=lsrK;go_function=autoinducer-2 kinase activity|0071518||IEA;go_process=carbohydrate metabolic process|0005975||IEA,quorum sensing|0009372||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019453907.1;locus_tag=IY40_RS04560;product=autoinducer-2 kinase;protein_id=WP_025301994.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 183498 183791 . + . ID=gene-IY40_RS04565;Name=lsrG;gbkey=Gene;gene=lsrG;gene_biotype=protein_coding;locus_tag=IY40_RS04565;old_locus_tag=IY40_04630 NZ_JPQY01000005.1 Protein Homology CDS 183498 183791 . + 0 ID=cds-WP_033642299.1;Parent=gene-IY40_RS04565;Dbxref=GenBank:WP_033642299.1;Name=WP_033642299.1;gbkey=CDS;gene=lsrG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004939559.1;locus_tag=IY40_RS04565;product=(4S)-4-hydroxy-5-phosphonooxypentane-2%2C3-dione isomerase;protein_id=WP_033642299.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 183879 184784 . + . ID=gene-IY40_RS04570;Name=IY40_RS04570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS04570;old_locus_tag=IY40_04635 NZ_JPQY01000005.1 Protein Homology CDS 183879 184784 . + 0 ID=cds-WP_025301996.1;Parent=gene-IY40_RS04570;Dbxref=GenBank:WP_025301996.1;Name=WP_025301996.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016928613.1;locus_tag=IY40_RS04570;product=EamA family transporter;protein_id=WP_025301996.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 184868 185458 . + . ID=gene-IY40_RS04575;Name=IY40_RS04575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS04575;old_locus_tag=IY40_04640 NZ_JPQY01000005.1 Protein Homology CDS 184868 185458 . + 0 ID=cds-WP_043136876.1;Parent=gene-IY40_RS04575;Dbxref=GenBank:WP_043136876.1;Name=WP_043136876.1;Ontology_term=GO:0006865,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016928612.1;locus_tag=IY40_RS04575;product=LysE family translocator;protein_id=WP_043136876.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 185434 186261 . - . ID=gene-IY40_RS04580;Name=IY40_RS04580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS04580;old_locus_tag=IY40_04645 NZ_JPQY01000005.1 Protein Homology CDS 185434 186261 . - 0 ID=cds-WP_025301998.1;Parent=gene-IY40_RS04580;Dbxref=GenBank:WP_025301998.1;Name=WP_025301998.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016928611.1;locus_tag=IY40_RS04580;product=AraC family transcriptional regulator;protein_id=WP_025301998.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 186331 186549 . + . ID=gene-IY40_RS04585;Name=IY40_RS04585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS04585;old_locus_tag=IY40_04650 NZ_JPQY01000005.1 Protein Homology CDS 186331 186549 . + 0 ID=cds-WP_025301999.1;Parent=gene-IY40_RS04585;Dbxref=GenBank:WP_025301999.1;Name=WP_025301999.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019453902.1;locus_tag=IY40_RS04585;product=DUF7661 family protein;protein_id=WP_025301999.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 186559 187407 . - . ID=gene-IY40_RS04590;Name=IY40_RS04590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS04590;old_locus_tag=IY40_04655 NZ_JPQY01000005.1 Protein Homology CDS 186559 187407 . - 0 ID=cds-WP_025302000.1;Parent=gene-IY40_RS04590;Dbxref=GenBank:WP_025302000.1;Name=WP_025302000.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004942055.1;locus_tag=IY40_RS04590;product=PA4780 family RIO1-like protein kinase;protein_id=WP_025302000.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 187528 189018 . - . ID=gene-IY40_RS04595;Name=amyA;gbkey=Gene;gene=amyA;gene_biotype=protein_coding;locus_tag=IY40_RS04595;old_locus_tag=IY40_04660 NZ_JPQY01000005.1 Protein Homology CDS 187528 189018 . - 0 ID=cds-WP_043136881.1;Parent=gene-IY40_RS04595;Dbxref=GenBank:WP_043136881.1;Name=WP_043136881.1;Ontology_term=GO:0005975,GO:0004553,GO:0005509;gbkey=CDS;gene=amyA;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA,calcium ion binding|0005509||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016928608.1;locus_tag=IY40_RS04595;product=alpha-amylase;protein_id=WP_043136881.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 189519 190424 . + . ID=gene-IY40_RS04605;Name=IY40_RS04605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS04605;old_locus_tag=IY40_04670 NZ_JPQY01000005.1 Protein Homology CDS 189519 190424 . + 0 ID=cds-WP_043136888.1;Parent=gene-IY40_RS04605;Dbxref=GenBank:WP_043136888.1;Name=WP_043136888.1;Ontology_term=GO:0003677,GO:0003700,GO:0008080;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016928604.1;locus_tag=IY40_RS04605;product=bifunctional helix-turn-helix transcriptional regulator/GNAT family N-acetyltransferase;protein_id=WP_043136888.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 190509 191807 . + . ID=gene-IY40_RS04610;Name=IY40_RS04610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS04610;old_locus_tag=IY40_04675 NZ_JPQY01000005.1 Protein Homology CDS 190509 191807 . + 0 ID=cds-WP_043136891.1;Parent=gene-IY40_RS04610;Dbxref=GenBank:WP_043136891.1;Name=WP_043136891.1;Ontology_term=GO:0006811,GO:0055085,GO:0015293,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA,transmembrane transporter activity|0022857||IEA;go_process=monoatomic ion transport|0006811||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015377083.1;locus_tag=IY40_RS04610;product=SLC13 family permease;protein_id=WP_043136891.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 191743 192657 . - . ID=gene-IY40_RS04615;Name=dapF;gbkey=Gene;gene=dapF;gene_biotype=protein_coding;locus_tag=IY40_RS04615 NZ_JPQY01000005.1 Protein Homology CDS 191743 192657 . - 0 ID=cds-WP_050505125.1;Parent=gene-IY40_RS04615;Dbxref=GenBank:WP_050505125.1;Name=WP_050505125.1;Ontology_term=GO:0009089,GO:0008837;gbkey=CDS;gene=dapF;go_function=diaminopimelate epimerase activity|0008837||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019454709.1;locus_tag=IY40_RS04615;product=diaminopimelate epimerase;protein_id=WP_050505125.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 192771 193028 . - . ID=gene-IY40_RS04620;Name=bhsA;gbkey=Gene;gene=bhsA;gene_biotype=protein_coding;locus_tag=IY40_RS04620;old_locus_tag=IY40_04685 NZ_JPQY01000005.1 Protein Homology CDS 192771 193028 . - 0 ID=cds-WP_016928601.1;Parent=gene-IY40_RS04620;Dbxref=GenBank:WP_016928601.1;Name=WP_016928601.1;Ontology_term=GO:0006950,GO:0046688;gbkey=CDS;gene=bhsA;go_process=response to stress|0006950||IEA,response to copper ion|0046688||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017892040.1;locus_tag=IY40_RS04620;product=multiple stress resistance protein BhsA;protein_id=WP_016928601.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 193220 193477 . - . ID=gene-IY40_RS04625;Name=bhsA;gbkey=Gene;gene=bhsA;gene_biotype=protein_coding;locus_tag=IY40_RS04625;old_locus_tag=IY40_04690 NZ_JPQY01000005.1 Protein Homology CDS 193220 193477 . - 0 ID=cds-WP_016928600.1;Parent=gene-IY40_RS04625;Dbxref=GenBank:WP_016928600.1;Name=WP_016928600.1;Ontology_term=GO:0006950,GO:0046688;gbkey=CDS;gene=bhsA;go_process=response to stress|0006950||IEA,response to copper ion|0046688||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004942062.1;locus_tag=IY40_RS04625;product=multiple stress resistance protein BhsA;protein_id=WP_016928600.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 193654 194298 . + . ID=gene-IY40_RS04630;Name=IY40_RS04630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS04630;old_locus_tag=IY40_04695 NZ_JPQY01000005.1 Protein Homology CDS 193654 194298 . + 0 ID=cds-WP_043136903.1;Parent=gene-IY40_RS04630;Dbxref=GenBank:WP_043136903.1;Name=WP_043136903.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019454707.1;locus_tag=IY40_RS04630;product=TetR/AcrR family transcriptional regulator;protein_id=WP_043136903.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 194334 195152 . - . ID=gene-IY40_RS04635;Name=IY40_RS04635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS04635;old_locus_tag=IY40_04700 NZ_JPQY01000005.1 Protein Homology CDS 194334 195152 . - 0 ID=cds-WP_043136906.1;Parent=gene-IY40_RS04635;Dbxref=GenBank:WP_043136906.1;Name=WP_043136906.1;Ontology_term=GO:0042626,GO:0140359,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004939506.1;locus_tag=IY40_RS04635;product=MetQ/NlpA family ABC transporter substrate-binding protein;protein_id=WP_043136906.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 195172 195840 . - . ID=gene-IY40_RS04640;Name=IY40_RS04640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS04640;old_locus_tag=IY40_04705 NZ_JPQY01000005.1 Protein Homology CDS 195172 195840 . - 0 ID=cds-WP_004939505.1;Parent=gene-IY40_RS04640;Dbxref=GenBank:WP_004939505.1;Name=WP_004939505.1;Ontology_term=GO:0048473,GO:0033232,GO:0042626;gbkey=CDS;go_function=ABC-type D-methionine transporter activity|0033232||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=D-methionine transmembrane transport|0048473||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006324250.1;locus_tag=IY40_RS04640;product=methionine ABC transporter permease;protein_id=WP_004939505.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 195833 196858 . - . ID=gene-IY40_RS04645;Name=IY40_RS04645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS04645;old_locus_tag=IY40_04710 NZ_JPQY01000005.1 Protein Homology CDS 195833 196858 . - 0 ID=cds-WP_025302007.1;Parent=gene-IY40_RS04645;Dbxref=GenBank:WP_025302007.1;Name=WP_025302007.1;Ontology_term=GO:0048473,GO:0005524,GO:0016887,GO:0033232,GO:0042626;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ABC-type D-methionine transporter activity|0033232||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=D-methionine transmembrane transport|0048473||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013812040.1;locus_tag=IY40_RS04645;product=methionine ABC transporter ATP-binding protein;protein_id=WP_025302007.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 197121 197564 . - . ID=gene-IY40_RS04650;Name=IY40_RS04650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS04650;old_locus_tag=IY40_04715 NZ_JPQY01000005.1 Protein Homology CDS 197121 197564 . - 0 ID=cds-WP_016928596.1;Parent=gene-IY40_RS04650;Dbxref=GenBank:WP_016928596.1;Name=WP_016928596.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012005831.1;locus_tag=IY40_RS04650;product=acetyltransferase;protein_id=WP_016928596.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 197807 198679 . + . ID=gene-IY40_RS04655;Name=IY40_RS04655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS04655;old_locus_tag=IY40_04720 NZ_JPQY01000005.1 Protein Homology CDS 197807 198679 . + 0 ID=cds-WP_025302008.1;Parent=gene-IY40_RS04655;Dbxref=GenBank:WP_025302008.1;Name=WP_025302008.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006324253.1;locus_tag=IY40_RS04655;product=oxygenase MpaB family protein;protein_id=WP_025302008.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 198843 199946 . + . ID=gene-IY40_RS04660;Name=IY40_RS04660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS04660;old_locus_tag=IY40_04725 NZ_JPQY01000005.1 Protein Homology CDS 198843 199946 . + 0 ID=cds-WP_043136910.1;Parent=gene-IY40_RS04660;Dbxref=GenBank:WP_043136910.1;Name=WP_043136910.1;Ontology_term=GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006316805.1;locus_tag=IY40_RS04660;product=suppressor of fused domain protein;protein_id=WP_043136910.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 199972 200499 . + . ID=gene-IY40_RS04665;Name=IY40_RS04665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS04665;old_locus_tag=IY40_04730 NZ_JPQY01000005.1 Protein Homology CDS 199972 200499 . + 0 ID=cds-WP_043136914.1;Parent=gene-IY40_RS04665;Dbxref=GenBank:WP_043136914.1;Name=WP_043136914.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016928593.1;locus_tag=IY40_RS04665;product=cysteine hydrolase family protein;protein_id=WP_043136914.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 200532 201407 . - . ID=gene-IY40_RS04670;Name=IY40_RS04670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS04670;old_locus_tag=IY40_04735 NZ_JPQY01000005.1 Protein Homology CDS 200532 201407 . - 0 ID=cds-WP_025302011.1;Parent=gene-IY40_RS04670;Dbxref=GenBank:WP_025302011.1;Name=WP_025302011.1;Ontology_term=GO:0016491,GO:0050661,GO:0051287;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NADP binding|0050661||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016928592.1;locus_tag=IY40_RS04670;product=NAD(P)-dependent oxidoreductase;protein_id=WP_025302011.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 201698 202705 . + . ID=gene-IY40_RS04675;Name=trpS;gbkey=Gene;gene=trpS;gene_biotype=protein_coding;locus_tag=IY40_RS04675;old_locus_tag=IY40_04740 NZ_JPQY01000005.1 Protein Homology CDS 201698 202705 . + 0 ID=cds-WP_043136919.1;Parent=gene-IY40_RS04675;Dbxref=GenBank:WP_043136919.1;Name=WP_043136919.1;Ontology_term=GO:0006436,GO:0000166,GO:0004830,GO:0005524;gbkey=CDS;gene=trpS;go_function=nucleotide binding|0000166||IEA,tryptophan-tRNA ligase activity|0004830||IEA,ATP binding|0005524||IEA;go_process=tryptophanyl-tRNA aminoacylation|0006436||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012005839.1;locus_tag=IY40_RS04675;product=tryptophan--tRNA ligase;protein_id=WP_043136919.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 202823 203656 . + . ID=gene-IY40_RS04680;Name=phnC;gbkey=Gene;gene=phnC;gene_biotype=protein_coding;locus_tag=IY40_RS04680;old_locus_tag=IY40_04745 NZ_JPQY01000005.1 Protein Homology CDS 202823 203656 . + 0 ID=cds-WP_019454697.1;Parent=gene-IY40_RS04680;Dbxref=GenBank:WP_019454697.1;Name=WP_019454697.1;Ontology_term=GO:0015716,GO:0005524,GO:0015416,GO:0016020;gbkey=CDS;gene=phnC;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type phosphonate transporter activity|0015416||IEA;go_process=organic phosphonate transport|0015716||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019454697.1;locus_tag=IY40_RS04680;product=phosphonate ABC transporter ATP-binding protein;protein_id=WP_019454697.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 203698 204630 . + . ID=gene-IY40_RS04685;Name=phnD;gbkey=Gene;gene=phnD;gene_biotype=protein_coding;locus_tag=IY40_RS04685;old_locus_tag=IY40_04750 NZ_JPQY01000005.1 Protein Homology CDS 203698 204630 . + 0 ID=cds-WP_025302014.1;Parent=gene-IY40_RS04685;Dbxref=GenBank:WP_025302014.1;Name=WP_025302014.1;Ontology_term=GO:0015716,GO:0043190;gbkey=CDS;gene=phnD;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_process=organic phosphonate transport|0015716||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005189592.1;locus_tag=IY40_RS04685;product=phosphonate ABC transporter substrate-binding protein;protein_id=WP_025302014.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 204709 205572 . + . ID=gene-IY40_RS04690;Name=phnE;gbkey=Gene;gene=phnE;gene_biotype=protein_coding;locus_tag=IY40_RS04690;old_locus_tag=IY40_04755 NZ_JPQY01000005.1 Protein Homology CDS 204709 205572 . + 0 ID=cds-WP_043136924.1;Parent=gene-IY40_RS04690;Dbxref=GenBank:WP_043136924.1;Name=WP_043136924.1;Ontology_term=GO:0015716,GO:0015416,GO:0005886,GO:0055052;gbkey=CDS;gene=phnE;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ABC-type phosphonate transporter activity|0015416||IEA;go_process=organic phosphonate transport|0015716||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006324265.1;locus_tag=IY40_RS04690;product=phosphonate ABC transporter%2C permease protein PhnE;protein_id=WP_043136924.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 205569 206468 . + . ID=gene-IY40_RS04695;Name=phnE;gbkey=Gene;gene=phnE;gene_biotype=protein_coding;locus_tag=IY40_RS04695;old_locus_tag=IY40_04760 NZ_JPQY01000005.1 Protein Homology CDS 205569 206468 . + 0 ID=cds-WP_025302015.1;Parent=gene-IY40_RS04695;Dbxref=GenBank:WP_025302015.1;Name=WP_025302015.1;Ontology_term=GO:0015716,GO:0015416,GO:0005886,GO:0055052;gbkey=CDS;gene=phnE;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ABC-type phosphonate transporter activity|0015416||IEA;go_process=organic phosphonate transport|0015716||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019454694.1;locus_tag=IY40_RS04695;product=phosphonate ABC transporter%2C permease protein PhnE;protein_id=WP_025302015.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 206700 207164 . + . ID=gene-IY40_RS04700;Name=IY40_RS04700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS04700;old_locus_tag=IY40_04765 NZ_JPQY01000005.1 Protein Homology CDS 206700 207164 . + 0 ID=cds-WP_004939471.1;Parent=gene-IY40_RS04700;Dbxref=GenBank:WP_004939471.1;Name=WP_004939471.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004942106.1;locus_tag=IY40_RS04700;product=YehS family protein;protein_id=WP_004939471.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 207342 209909 . + . ID=gene-IY40_RS04705;Name=IY40_RS04705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS04705;old_locus_tag=IY40_04770 NZ_JPQY01000005.1 Protein Homology CDS 207342 209909 . + 0 ID=cds-WP_043136928.1;Parent=gene-IY40_RS04705;Dbxref=GenBank:WP_043136928.1;Name=WP_043136928.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015377096.1;locus_tag=IY40_RS04705;product=putative mucin/carbohydrate-binding domain-containing protein;protein_id=WP_043136928.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 210133 211962 . + . ID=gene-IY40_RS04710;Name=atzF;gbkey=Gene;gene=atzF;gene_biotype=protein_coding;locus_tag=IY40_RS04710;old_locus_tag=IY40_04775 NZ_JPQY01000005.1 Protein Homology CDS 210133 211962 . + 0 ID=cds-WP_043136933.1;Parent=gene-IY40_RS04710;Dbxref=GenBank:WP_043136933.1;Name=WP_043136933.1;Ontology_term=GO:0019627,GO:0004039;gbkey=CDS;gene=atzF;go_function=allophanate hydrolase activity|0004039||IEA;go_process=urea metabolic process|0019627||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004939467.1;locus_tag=IY40_RS04710;product=allophanate hydrolase;protein_id=WP_043136933.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 211965 215585 . + . ID=gene-IY40_RS04715;Name=uca;gbkey=Gene;gene=uca;gene_biotype=protein_coding;locus_tag=IY40_RS04715;old_locus_tag=IY40_04780 NZ_JPQY01000005.1 Protein Homology CDS 211965 215585 . + 0 ID=cds-WP_043137200.1;Parent=gene-IY40_RS04715;Dbxref=GenBank:WP_043137200.1;Name=WP_043137200.1;Ontology_term=GO:0019627,GO:0004847;gbkey=CDS;gene=uca;go_function=urea carboxylase activity|0004847||IEA;go_process=urea metabolic process|0019627||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013573426.1;locus_tag=IY40_RS04715;product=urea carboxylase;protein_id=WP_043137200.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 215600 216310 . + . ID=gene-IY40_RS04720;Name=IY40_RS04720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS04720;old_locus_tag=IY40_04785 NZ_JPQY01000005.1 Protein Homology CDS 215600 216310 . + 0 ID=cds-WP_043137204.1;Parent=gene-IY40_RS04720;Dbxref=GenBank:WP_043137204.1;Name=WP_043137204.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016928585.1;locus_tag=IY40_RS04720;product=GntR family transcriptional regulator;protein_id=WP_043137204.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 216346 217614 . + . ID=gene-IY40_RS04725;Name=urtA;gbkey=Gene;gene=urtA;gene_biotype=protein_coding;locus_tag=IY40_RS04725;old_locus_tag=IY40_04790 NZ_JPQY01000005.1 Protein Homology CDS 216346 217614 . + 0 ID=cds-WP_025302020.1;Parent=gene-IY40_RS04725;Dbxref=GenBank:WP_025302020.1;Name=WP_025302020.1;Ontology_term=GO:0015840,GO:0033219,GO:0033221,GO:0030288,GO:0055052;gbkey=CDS;gene=urtA;go_component=outer membrane-bounded periplasmic space|0030288||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=urea binding|0033219||IEA,ATPase-coupled urea transmembrane transporter activity|0033221||IEA;go_process=urea transport|0015840||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017892062.1;locus_tag=IY40_RS04725;product=urea ABC transporter substrate-binding protein;protein_id=WP_025302020.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 217671 219251 . + . ID=gene-IY40_RS04730;Name=urtB;gbkey=Gene;gene=urtB;gene_biotype=protein_coding;locus_tag=IY40_RS04730;old_locus_tag=IY40_04795 NZ_JPQY01000005.1 Protein Homology CDS 217671 219251 . + 0 ID=cds-WP_043136936.1;Parent=gene-IY40_RS04730;Dbxref=GenBank:WP_043136936.1;Name=WP_043136936.1;Ontology_term=GO:0015840,GO:0033221,GO:0005886,GO:0055052;gbkey=CDS;gene=urtB;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled urea transmembrane transporter activity|0033221||IEA;go_process=urea transport|0015840||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019454687.1;locus_tag=IY40_RS04730;product=urea ABC transporter permease subunit UrtB;protein_id=WP_043136936.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 219251 220327 . + . ID=gene-IY40_RS04735;Name=urtC;gbkey=Gene;gene=urtC;gene_biotype=protein_coding;locus_tag=IY40_RS04735;old_locus_tag=IY40_04800 NZ_JPQY01000005.1 Protein Homology CDS 219251 220327 . + 0 ID=cds-WP_025302022.1;Parent=gene-IY40_RS04735;Dbxref=GenBank:WP_025302022.1;Name=WP_025302022.1;Ontology_term=GO:0015840,GO:0033221,GO:0005886,GO:0055052;gbkey=CDS;gene=urtC;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled urea transmembrane transporter activity|0033221||IEA;go_process=urea transport|0015840||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016928582.1;locus_tag=IY40_RS04735;product=urea ABC transporter permease subunit UrtC;protein_id=WP_025302022.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 220324 221130 . + . ID=gene-IY40_RS04740;Name=urtD;gbkey=Gene;gene=urtD;gene_biotype=protein_coding;locus_tag=IY40_RS04740;old_locus_tag=IY40_04805 NZ_JPQY01000005.1 Protein Homology CDS 220324 221130 . + 0 ID=cds-WP_015377102.1;Parent=gene-IY40_RS04740;Dbxref=GenBank:WP_015377102.1;Name=WP_015377102.1;Ontology_term=GO:0015840,GO:0005524,GO:0033221,GO:0009898,GO:0055052;gbkey=CDS;gene=urtD;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled urea transmembrane transporter activity|0033221||IEA;go_process=urea transport|0015840||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017892066.1;locus_tag=IY40_RS04740;product=urea ABC transporter ATP-binding protein UrtD;protein_id=WP_015377102.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 221143 221841 . + . ID=gene-IY40_RS04745;Name=urtE;gbkey=Gene;gene=urtE;gene_biotype=protein_coding;locus_tag=IY40_RS04745;old_locus_tag=IY40_04810 NZ_JPQY01000005.1 Protein Homology CDS 221143 221841 . + 0 ID=cds-WP_043136939.1;Parent=gene-IY40_RS04745;Dbxref=GenBank:WP_043136939.1;Name=WP_043136939.1;Ontology_term=GO:0015840,GO:0005524,GO:0033221,GO:0009898,GO:0055052;gbkey=CDS;gene=urtE;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled urea transmembrane transporter activity|0033221||IEA;go_process=urea transport|0015840||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003854882.1;locus_tag=IY40_RS04745;product=urea ABC transporter ATP-binding subunit UrtE;protein_id=WP_043136939.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 221849 222148 . - . ID=gene-IY40_RS04750;Name=IY40_RS04750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS04750;old_locus_tag=IY40_04815 NZ_JPQY01000005.1 Protein Homology CDS 221849 222148 . - 0 ID=cds-WP_043136941.1;Parent=gene-IY40_RS04750;Dbxref=GenBank:WP_043136941.1;Name=WP_043136941.1;Ontology_term=GO:0090729,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=toxin activity|0090729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013812063.1;locus_tag=IY40_RS04750;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_043136941.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 222133 222396 . - . ID=gene-IY40_RS04755;Name=IY40_RS04755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS04755;old_locus_tag=IY40_04820 NZ_JPQY01000005.1 Protein Homology CDS 222133 222396 . - 0 ID=cds-WP_043136944.1;Parent=gene-IY40_RS04755;Dbxref=GenBank:WP_043136944.1;Name=WP_043136944.1;Ontology_term=GO:0051983;gbkey=CDS;go_process=regulation of chromosome segregation|0051983||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004939442.1;locus_tag=IY40_RS04755;product=type II toxin-antitoxin system ParD family antitoxin;protein_id=WP_043136944.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 222531 223043 . + . ID=gene-IY40_RS04760;Name=IY40_RS04760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS04760;old_locus_tag=IY40_04825 NZ_JPQY01000005.1 Protein Homology CDS 222531 223043 . + 0 ID=cds-WP_043136947.1;Parent=gene-IY40_RS04760;Dbxref=GenBank:WP_043136947.1;Name=WP_043136947.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016928579.1;locus_tag=IY40_RS04760;product=DUF2165 family protein;protein_id=WP_043136947.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 223065 223577 . - . ID=gene-IY40_RS04765;Name=IY40_RS04765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS04765;old_locus_tag=IY40_04830 NZ_JPQY01000005.1 Protein Homology CDS 223065 223577 . - 0 ID=cds-WP_043136950.1;Parent=gene-IY40_RS04765;Dbxref=GenBank:WP_043136950.1;Name=WP_043136950.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015377104.1;locus_tag=IY40_RS04765;product=GNAT family N-acetyltransferase;protein_id=WP_043136950.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 223602 223907 . - . ID=gene-IY40_RS04770;Name=IY40_RS04770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS04770;old_locus_tag=IY40_04835 NZ_JPQY01000005.1 Protein Homology CDS 223602 223907 . - 0 ID=cds-WP_028127915.1;Parent=gene-IY40_RS04770;Dbxref=GenBank:WP_028127915.1;Name=WP_028127915.1;Ontology_term=GO:0090729,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=toxin activity|0090729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016928577.1;locus_tag=IY40_RS04770;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_028127915.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 223909 224169 . - . ID=gene-IY40_RS04775;Name=IY40_RS04775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS04775;old_locus_tag=IY40_04840 NZ_JPQY01000005.1 Protein Homology CDS 223909 224169 . - 0 ID=cds-WP_016928576.1;Parent=gene-IY40_RS04775;Dbxref=GenBank:WP_016928576.1;Name=WP_016928576.1;Ontology_term=GO:0006355,GO:0045927,GO:0003677,GO:0097351,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=DNA binding|0003677||IEA,toxin sequestering activity|0097351||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,positive regulation of growth|0045927||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016928576.1;locus_tag=IY40_RS04775;product=type II toxin-antitoxin system Phd/YefM family antitoxin;protein_id=WP_016928576.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 224238 225473 . - . ID=gene-IY40_RS04780;Name=IY40_RS04780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS04780;old_locus_tag=IY40_04845 NZ_JPQY01000005.1 Protein Homology CDS 224238 225473 . - 0 ID=cds-WP_043136957.1;Parent=gene-IY40_RS04780;Dbxref=GenBank:WP_043136957.1;Name=WP_043136957.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015377107.1;locus_tag=IY40_RS04780;product=FAD-dependent oxidoreductase;protein_id=WP_043136957.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 225550 226119 . - . ID=gene-IY40_RS04785;Name=IY40_RS04785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS04785;old_locus_tag=IY40_04850 NZ_JPQY01000005.1 Protein Homology CDS 225550 226119 . - 0 ID=cds-WP_043136961.1;Parent=gene-IY40_RS04785;Dbxref=GenBank:WP_043136961.1;Name=WP_043136961.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016928574.1;locus_tag=IY40_RS04785;product=DUF4865 family protein;protein_id=WP_043136961.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 226225 227094 . + . ID=gene-IY40_RS04790;Name=IY40_RS04790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS04790;old_locus_tag=IY40_04855 NZ_JPQY01000005.1 Protein Homology CDS 226225 227094 . + 0 ID=cds-WP_025302028.1;Parent=gene-IY40_RS04790;Dbxref=GenBank:WP_025302028.1;Name=WP_025302028.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016928573.1;locus_tag=IY40_RS04790;product=LysR substrate-binding domain-containing protein;protein_id=WP_025302028.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 227091 227936 . - . ID=gene-IY40_RS04795;Name=sseA;gbkey=Gene;gene=sseA;gene_biotype=protein_coding;locus_tag=IY40_RS04795;old_locus_tag=IY40_04860 NZ_JPQY01000005.1 Protein Homology CDS 227091 227936 . - 0 ID=cds-WP_043136964.1;Parent=gene-IY40_RS04795;Dbxref=GenBank:WP_043136964.1;Name=WP_043136964.1;Ontology_term=GO:0004792;gbkey=CDS;gene=sseA;go_function=thiosulfate-cyanide sulfurtransferase activity|0004792||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004942126.1;locus_tag=IY40_RS04795;product=3-mercaptopyruvate sulfurtransferase;protein_id=WP_043136964.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 228043 228465 . + . ID=gene-IY40_RS04800;Name=IY40_RS04800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS04800;old_locus_tag=IY40_04865 NZ_JPQY01000005.1 Protein Homology CDS 228043 228465 . + 0 ID=cds-WP_043136967.1;Parent=gene-IY40_RS04800;Dbxref=GenBank:WP_043136967.1;Name=WP_043136967.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015377111.1;locus_tag=IY40_RS04800;product=NUDIX hydrolase;protein_id=WP_043136967.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 228476 229141 . - . ID=gene-IY40_RS04805;Name=IY40_RS04805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS04805;old_locus_tag=IY40_04870 NZ_JPQY01000005.1 Protein Homology CDS 228476 229141 . - 0 ID=cds-WP_043136971.1;Parent=gene-IY40_RS04805;Dbxref=GenBank:WP_043136971.1;Name=WP_043136971.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016928570.1;locus_tag=IY40_RS04805;product=Rossmann-fold NAD(P)-binding domain-containing protein;protein_id=WP_043136971.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 229138 230163 . - . ID=gene-IY40_RS04810;Name=IY40_RS04810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS04810;old_locus_tag=IY40_04875 NZ_JPQY01000005.1 Protein Homology CDS 229138 230163 . - 0 ID=cds-WP_025302032.1;Parent=gene-IY40_RS04810;Dbxref=GenBank:WP_025302032.1;Name=WP_025302032.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017892082.1;locus_tag=IY40_RS04810;product=AraC family transcriptional regulator;protein_id=WP_025302032.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 230245 231681 . - . ID=gene-IY40_RS04815;Name=IY40_RS04815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS04815;old_locus_tag=IY40_04880 NZ_JPQY01000005.1 Protein Homology CDS 230245 231681 . - 0 ID=cds-WP_043136975.1;Parent=gene-IY40_RS04815;Dbxref=GenBank:WP_043136975.1;Name=WP_043136975.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019454673.1;locus_tag=IY40_RS04815;product=aminotransferase-like domain-containing protein;protein_id=WP_043136975.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 231862 232044 . + . ID=gene-IY40_RS25055;Name=IY40_RS25055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS25055 NZ_JPQY01000005.1 Protein Homology CDS 231862 232044 . + 0 ID=cds-WP_016928567.1;Parent=gene-IY40_RS25055;Dbxref=GenBank:WP_016928567.1;Name=WP_016928567.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016928567.1;locus_tag=IY40_RS25055;product=DUF1127 domain-containing protein;protein_id=WP_016928567.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 232060 232683 . + . ID=gene-IY40_RS04820;Name=IY40_RS04820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS04820;old_locus_tag=IY40_04885 NZ_JPQY01000005.1 Protein Homology CDS 232060 232683 . + 0 ID=cds-WP_043136979.1;Parent=gene-IY40_RS04820;Dbxref=GenBank:WP_043136979.1;Name=WP_043136979.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004942140.1;locus_tag=IY40_RS04820;product=glutathione S-transferase family protein;protein_id=WP_043136979.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 232912 234042 . + . ID=gene-IY40_RS04825;Name=IY40_RS04825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS04825;old_locus_tag=IY40_04890 NZ_JPQY01000005.1 Protein Homology CDS 232912 234042 . + 0 ID=cds-WP_043136982.1;Parent=gene-IY40_RS04825;Dbxref=GenBank:WP_043136982.1;Name=WP_043136982.1;Ontology_term=GO:0000166,GO:0003824;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017892085.1;locus_tag=IY40_RS04825;product=Gfo/Idh/MocA family protein;protein_id=WP_043136982.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 234144 236015 . - . ID=gene-IY40_RS04830;Name=IY40_RS04830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS04830;old_locus_tag=IY40_04895 NZ_JPQY01000005.1 Protein Homology CDS 234144 236015 . - 0 ID=cds-WP_025302036.1;Parent=gene-IY40_RS04830;Dbxref=GenBank:WP_025302036.1;Name=WP_025302036.1;Ontology_term=GO:0016810,GO:0046872;gbkey=CDS;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016928564.1;locus_tag=IY40_RS04830;product=amidohydrolase;protein_id=WP_025302036.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 236037 236582 . - . ID=gene-IY40_RS04835;Name=IY40_RS04835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS04835;old_locus_tag=IY40_04900 NZ_JPQY01000005.1 Protein Homology CDS 236037 236582 . - 0 ID=cds-WP_043136985.1;Parent=gene-IY40_RS04835;Dbxref=GenBank:WP_043136985.1;Name=WP_043136985.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016928563.1;locus_tag=IY40_RS04835;product=antibiotic biosynthesis monooxygenase;protein_id=WP_043136985.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 236631 237275 . - . ID=gene-IY40_RS04840;Name=IY40_RS04840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS04840;old_locus_tag=IY40_04905 NZ_JPQY01000005.1 Protein Homology CDS 236631 237275 . - 0 ID=cds-WP_004939390.1;Parent=gene-IY40_RS04840;Dbxref=GenBank:WP_004939390.1;Name=WP_004939390.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004939390.1;locus_tag=IY40_RS04840;product=hydrolase;protein_id=WP_004939390.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 237416 238327 . + . ID=gene-IY40_RS04845;Name=IY40_RS04845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS04845;old_locus_tag=IY40_04910 NZ_JPQY01000005.1 Protein Homology CDS 237416 238327 . + 0 ID=cds-WP_025302038.1;Parent=gene-IY40_RS04845;Dbxref=GenBank:WP_025302038.1;Name=WP_025302038.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004939387.1;locus_tag=IY40_RS04845;product=LysR substrate-binding domain-containing protein;protein_id=WP_025302038.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 238369 238743 . + . ID=gene-IY40_RS04850;Name=IY40_RS04850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS04850;old_locus_tag=IY40_04915 NZ_JPQY01000005.1 Protein Homology CDS 238369 238743 . + 0 ID=cds-WP_043136990.1;Parent=gene-IY40_RS04850;Dbxref=GenBank:WP_043136990.1;Name=WP_043136990.1;Ontology_term=GO:0043213,GO:0019534,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=toxin transmembrane transporter activity|0019534||IEA;go_process=bacteriocin transport|0043213||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015377118.1;locus_tag=IY40_RS04850;product=cell envelope integrity TolA C-terminal domain-containing protein;protein_id=WP_043136990.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 238884 239360 . + . ID=gene-IY40_RS04855;Name=IY40_RS04855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS04855;old_locus_tag=IY40_04920 NZ_JPQY01000005.1 Protein Homology CDS 238884 239360 . + 0 ID=cds-WP_043136993.1;Parent=gene-IY40_RS04855;Dbxref=GenBank:WP_043136993.1;Name=WP_043136993.1;Ontology_term=GO:0006979,GO:0004601;gbkey=CDS;go_function=peroxidase activity|0004601||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004939379.1;locus_tag=IY40_RS04855;product=OsmC family protein;protein_id=WP_043136993.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 239450 240481 . + . ID=gene-IY40_RS04860;Name=IY40_RS04860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS04860;old_locus_tag=IY40_04925 NZ_JPQY01000005.1 Protein Homology CDS 239450 240481 . + 0 ID=cds-WP_038629055.1;Parent=gene-IY40_RS04860;Dbxref=GenBank:WP_038629055.1;Name=WP_038629055.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016928559.1;locus_tag=IY40_RS04860;product=fatty acid desaturase;protein_id=WP_038629055.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 240522 241451 . + . ID=gene-IY40_RS04865;Name=osmF;gbkey=Gene;gene=osmF;gene_biotype=protein_coding;locus_tag=IY40_RS04865;old_locus_tag=IY40_04930 NZ_JPQY01000005.1 Protein Homology CDS 240522 241451 . + 0 ID=cds-WP_025302041.1;Parent=gene-IY40_RS04865;Dbxref=GenBank:WP_025302041.1;Name=WP_025302041.1;Ontology_term=GO:0031460,GO:0022857;gbkey=CDS;gene=osmF;go_function=transmembrane transporter activity|0022857||IEA;go_process=glycine betaine transport|0031460||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016266246.1;locus_tag=IY40_RS04865;product=glycine betaine ABC transporter substrate-binding protein OsmF;protein_id=WP_025302041.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 241513 242673 . + . ID=gene-IY40_RS04870;Name=IY40_RS04870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS04870;old_locus_tag=IY40_04935 NZ_JPQY01000005.1 Protein Homology CDS 241513 242673 . + 0 ID=cds-WP_043136997.1;Parent=gene-IY40_RS04870;Dbxref=GenBank:WP_043136997.1;Name=WP_043136997.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006324300.1;locus_tag=IY40_RS04870;product=ABC transporter permease;protein_id=WP_043136997.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 242670 243605 . + . ID=gene-IY40_RS04875;Name=IY40_RS04875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS04875;old_locus_tag=IY40_04940 NZ_JPQY01000005.1 Protein Homology CDS 242670 243605 . + 0 ID=cds-WP_043137000.1;Parent=gene-IY40_RS04875;Dbxref=GenBank:WP_043137000.1;Name=WP_043137000.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016928556.1;locus_tag=IY40_RS04875;product=ABC transporter ATP-binding protein;protein_id=WP_043137000.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 243602 244375 . + . ID=gene-IY40_RS04880;Name=IY40_RS04880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS04880;old_locus_tag=IY40_04945 NZ_JPQY01000005.1 Protein Homology CDS 243602 244375 . + 0 ID=cds-WP_043137004.1;Parent=gene-IY40_RS04880;Dbxref=GenBank:WP_043137004.1;Name=WP_043137004.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004939366.1;locus_tag=IY40_RS04880;product=ABC transporter permease;protein_id=WP_043137004.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 244404 245165 . + . ID=gene-IY40_RS04885;Name=IY40_RS04885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS04885;old_locus_tag=IY40_04950 NZ_JPQY01000005.1 Protein Homology CDS 244404 245165 . + 0 ID=cds-WP_080287111.1;Parent=gene-IY40_RS04885;Dbxref=GenBank:WP_080287111.1;Name=WP_080287111.1;Ontology_term=GO:0005524,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016928554.1;locus_tag=IY40_RS04885;product=phosphate/phosphite/phosphonate ABC transporter substrate-binding protein;protein_id=WP_080287111.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 245172 245891 . - . ID=gene-IY40_RS04890;Name=IY40_RS04890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS04890;old_locus_tag=IY40_04955 NZ_JPQY01000005.1 Protein Homology CDS 245172 245891 . - 0 ID=cds-WP_043137011.1;Parent=gene-IY40_RS04890;Dbxref=GenBank:WP_043137011.1;Name=WP_043137011.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015377125.1;locus_tag=IY40_RS04890;product=SDR family oxidoreductase;protein_id=WP_043137011.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 246026 246937 . + . ID=gene-IY40_RS04895;Name=IY40_RS04895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS04895;old_locus_tag=IY40_04960 NZ_JPQY01000005.1 Protein Homology CDS 246026 246937 . + 0 ID=cds-WP_043137014.1;Parent=gene-IY40_RS04895;Dbxref=GenBank:WP_043137014.1;Name=WP_043137014.1;Ontology_term=GO:0006355,GO:0001216,GO:0032993;gbkey=CDS;go_component=protein-DNA complex|0032993||IEA;go_function=DNA-binding transcription activator activity|0001216||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015377126.1;locus_tag=IY40_RS04895;product=LysR family transcriptional regulator;protein_id=WP_043137014.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 246925 247101 . - . ID=gene-IY40_RS26350;Name=IY40_RS26350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS26350 NZ_JPQY01000005.1 Protein Homology CDS 246925 247101 . - 0 ID=cds-WP_162837922.1;Parent=gene-IY40_RS26350;Dbxref=GenBank:WP_162837922.1;Name=WP_162837922.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016928550.1;locus_tag=IY40_RS26350;product=hypothetical protein;protein_id=WP_162837922.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 247205 248128 . - . ID=gene-IY40_RS04900;Name=yedA;gbkey=Gene;gene=yedA;gene_biotype=protein_coding;locus_tag=IY40_RS04900;old_locus_tag=IY40_04970 NZ_JPQY01000005.1 Protein Homology CDS 247205 248128 . - 0 ID=cds-WP_025302048.1;Parent=gene-IY40_RS04900;Dbxref=GenBank:WP_025302048.1;Name=WP_025302048.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yedA;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015377127.1;locus_tag=IY40_RS04900;product=drug/metabolite exporter YedA;protein_id=WP_025302048.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 248239 248733 . - . ID=gene-IY40_RS04905;Name=IY40_RS04905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS04905;old_locus_tag=IY40_04975 NZ_JPQY01000005.1 Protein Homology CDS 248239 248733 . - 0 ID=cds-WP_025302049.1;Parent=gene-IY40_RS04905;Dbxref=GenBank:WP_025302049.1;Name=WP_025302049.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019454653.1;locus_tag=IY40_RS04905;product=DUF2878 domain-containing protein;protein_id=WP_025302049.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 248910 249563 . - . ID=gene-IY40_RS04910;Name=IY40_RS04910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS04910;old_locus_tag=IY40_04980 NZ_JPQY01000005.1 Protein Homology CDS 248910 249563 . - 0 ID=cds-WP_043137019.1;Parent=gene-IY40_RS04910;Dbxref=GenBank:WP_043137019.1;Name=WP_043137019.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013812094.1;locus_tag=IY40_RS04910;product=helix-turn-helix transcriptional regulator;protein_id=WP_043137019.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 249667 251121 . + . ID=gene-IY40_RS04915;Name=IY40_RS04915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS04915;old_locus_tag=IY40_04985 NZ_JPQY01000005.1 Protein Homology CDS 249667 251121 . + 0 ID=cds-WP_043137022.1;Parent=gene-IY40_RS04915;Dbxref=GenBank:WP_043137022.1;Name=WP_043137022.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015377130.1;locus_tag=IY40_RS04915;product=MFS transporter;protein_id=WP_043137022.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 251152 252000 . + . ID=gene-IY40_RS04920;Name=IY40_RS04920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS04920;old_locus_tag=IY40_04990 NZ_JPQY01000005.1 Protein Homology CDS 251152 252000 . + 0 ID=cds-WP_151429128.1;Parent=gene-IY40_RS04920;Dbxref=GenBank:WP_151429128.1;Name=WP_151429128.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019454650.1;locus_tag=IY40_RS04920;product=helix-turn-helix transcriptional regulator;protein_id=WP_151429128.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 252072 252782 . + . ID=gene-IY40_RS04925;Name=IY40_RS04925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS04925;old_locus_tag=IY40_04995 NZ_JPQY01000005.1 Protein Homology CDS 252072 252782 . + 0 ID=cds-WP_043137025.1;Parent=gene-IY40_RS04925;Dbxref=GenBank:WP_043137025.1;Name=WP_043137025.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020,GO:1902495;gbkey=CDS;go_component=membrane|0016020||IEA,transmembrane transporter complex|1902495||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019454649.1;locus_tag=IY40_RS04925;product=AzlC family ABC transporter permease;protein_id=WP_043137025.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 252779 253090 . + . ID=gene-IY40_RS04930;Name=IY40_RS04930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS04930;old_locus_tag=IY40_05000 NZ_JPQY01000005.1 Protein Homology CDS 252779 253090 . + 0 ID=cds-WP_043137027.1;Parent=gene-IY40_RS04930;Dbxref=GenBank:WP_043137027.1;Name=WP_043137027.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006324314.1;locus_tag=IY40_RS04930;product=AzlD domain-containing protein;protein_id=WP_043137027.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 253160 253729 . + . ID=gene-IY40_RS04935;Name=IY40_RS04935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS04935;old_locus_tag=IY40_05005 NZ_JPQY01000005.1 Protein Homology CDS 253160 253729 . + 0 ID=cds-WP_043137029.1;Parent=gene-IY40_RS04935;Dbxref=GenBank:WP_043137029.1;Name=WP_043137029.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019454647.1;locus_tag=IY40_RS04935;product=helix-turn-helix domain-containing protein;protein_id=WP_043137029.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 253732 254250 . + . ID=gene-IY40_RS04940;Name=IY40_RS04940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS04940;old_locus_tag=IY40_05010 NZ_JPQY01000005.1 Protein Homology CDS 253732 254250 . + 0 ID=cds-WP_043137032.1;Parent=gene-IY40_RS04940;Dbxref=GenBank:WP_043137032.1;Name=WP_043137032.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019454646.1;locus_tag=IY40_RS04940;product=GNAT family N-acetyltransferase;protein_id=WP_043137032.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 254316 254699 . + . ID=gene-IY40_RS25060;Name=IY40_RS25060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS25060 NZ_JPQY01000005.1 Protein Homology CDS 254316 254699 . + 0 ID=cds-WP_314727669.1;Parent=gene-IY40_RS25060;Dbxref=GenBank:WP_314727669.1;Name=WP_314727669.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007371999.1;locus_tag=IY40_RS25060;product=GNAT family N-acetyltransferase;protein_id=WP_314727669.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 255084 255914 . - . ID=gene-IY40_RS04945;Name=IY40_RS04945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS04945;old_locus_tag=IY40_05015 NZ_JPQY01000005.1 Protein Homology CDS 255084 255914 . - 0 ID=cds-WP_043137035.1;Parent=gene-IY40_RS04945;Dbxref=GenBank:WP_043137035.1;Name=WP_043137035.1;Ontology_term=GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015377132.1;locus_tag=IY40_RS04945;product=5'-nucleotidase%2C lipoprotein e(P4) family;protein_id=WP_043137035.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 255932 256783 . - . ID=gene-IY40_RS04950;Name=IY40_RS04950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS04950;old_locus_tag=IY40_05020 NZ_JPQY01000005.1 Protein Homology CDS 255932 256783 . - 0 ID=cds-WP_043137039.1;Parent=gene-IY40_RS04950;Dbxref=GenBank:WP_043137039.1;Name=WP_043137039.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004939327.1;locus_tag=IY40_RS04950;product=GNAT family N-acetyltransferase;protein_id=WP_043137039.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 256963 258060 . - . ID=gene-IY40_RS04955;Name=ompC;gbkey=Gene;gene=ompC;gene_biotype=protein_coding;locus_tag=IY40_RS04955;old_locus_tag=IY40_05025 NZ_JPQY01000005.1 Protein Homology CDS 256963 258060 . - 0 ID=cds-WP_025302059.1;Parent=gene-IY40_RS04955;Dbxref=GenBank:WP_025302059.1;Name=WP_025302059.1;Ontology_term=GO:0034220,GO:0015288;gbkey=CDS;gene=ompC;go_function=porin activity|0015288||IEA;go_process=monoatomic ion transmembrane transport|0034220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005158804.1;locus_tag=IY40_RS04955;product=porin OmpC;protein_id=WP_025302059.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 258302 258958 . + . ID=gene-IY40_RS04960;Name=IY40_RS04960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS04960;old_locus_tag=IY40_05030 NZ_JPQY01000005.1 Protein Homology CDS 258302 258958 . + 0 ID=cds-WP_043137043.1;Parent=gene-IY40_RS04960;Dbxref=GenBank:WP_043137043.1;Name=WP_043137043.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015377134.1;locus_tag=IY40_RS04960;product=glutathione S-transferase family protein;protein_id=WP_043137043.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 259083 259415 . + . ID=gene-IY40_RS04965;Name=IY40_RS04965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS04965;old_locus_tag=IY40_05035 NZ_JPQY01000005.1 Protein Homology CDS 259083 259415 . + 0 ID=cds-WP_025302061.1;Parent=gene-IY40_RS04965;Dbxref=GenBank:WP_025302061.1;Name=WP_025302061.1;Ontology_term=GO:0051920;gbkey=CDS;go_function=peroxiredoxin activity|0051920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004939319.1;locus_tag=IY40_RS04965;product=carboxymuconolactone decarboxylase family protein;protein_id=WP_025302061.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 259405 259797 . + . ID=gene-IY40_RS04970;Name=IY40_RS04970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS04970;old_locus_tag=IY40_05040 NZ_JPQY01000005.1 Protein Homology CDS 259405 259797 . + 0 ID=cds-WP_043137047.1;Parent=gene-IY40_RS04970;Dbxref=GenBank:WP_043137047.1;Name=WP_043137047.1;Ontology_term=GO:0008152,GO:0016853;gbkey=CDS;go_function=isomerase activity|0016853||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016928540.1;locus_tag=IY40_RS04970;product=tautomerase family protein;protein_id=WP_043137047.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 259864 262062 . + . ID=gene-IY40_RS04975;Name=dinG;gbkey=Gene;gene=dinG;gene_biotype=protein_coding;locus_tag=IY40_RS04975;old_locus_tag=IY40_05045 NZ_JPQY01000005.1 Protein Homology CDS 259864 262062 . + 0 ID=cds-WP_025302063.1;Parent=gene-IY40_RS04975;Dbxref=GenBank:WP_025302063.1;Name=WP_025302063.1;Ontology_term=GO:0006139,GO:0003677,GO:0003678,GO:0005524,GO:0016818;gbkey=CDS;gene=dinG;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA,hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004942197.1;locus_tag=IY40_RS04975;product=ATP-dependent DNA helicase DinG;protein_id=WP_025302063.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 262063 262497 . - . ID=gene-IY40_RS04980;Name=IY40_RS04980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS04980;old_locus_tag=IY40_05050 NZ_JPQY01000005.1 Protein Homology CDS 262063 262497 . - 0 ID=cds-WP_025302064.1;Parent=gene-IY40_RS04980;Dbxref=GenBank:WP_025302064.1;Name=WP_025302064.1;Ontology_term=GO:0043565;gbkey=CDS;go_function=sequence-specific DNA binding|0043565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012005895.1;locus_tag=IY40_RS04980;product=Lrp/AsnC family transcriptional regulator;protein_id=WP_025302064.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 262634 263542 . + . ID=gene-IY40_RS04985;Name=IY40_RS04985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS04985;old_locus_tag=IY40_05055 NZ_JPQY01000005.1 Protein Homology CDS 262634 263542 . + 0 ID=cds-WP_043137050.1;Parent=gene-IY40_RS04985;Dbxref=GenBank:WP_043137050.1;Name=WP_043137050.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015377138.1;locus_tag=IY40_RS04985;product=DMT family transporter;protein_id=WP_043137050.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 263546 265147 . - . ID=gene-IY40_RS04990;Name=prpR;gbkey=Gene;gene=prpR;gene_biotype=protein_coding;locus_tag=IY40_RS04990;old_locus_tag=IY40_05060 NZ_JPQY01000005.1 Protein Homology CDS 263546 265147 . - 0 ID=cds-WP_025302066.1;Parent=gene-IY40_RS04990;Dbxref=GenBank:WP_025302066.1;Name=WP_025302066.1;gbkey=CDS;gene=prpR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016928536.1;locus_tag=IY40_RS04990;product=propionate catabolism operon regulatory protein PrpR;protein_id=WP_025302066.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 265393 266283 . + . ID=gene-IY40_RS04995;Name=prpB;gbkey=Gene;gene=prpB;gene_biotype=protein_coding;locus_tag=IY40_RS04995;old_locus_tag=IY40_05065 NZ_JPQY01000005.1 Protein Homology CDS 265393 266283 . + 0 ID=cds-WP_043137053.1;Parent=gene-IY40_RS04995;Dbxref=GenBank:WP_043137053.1;Name=WP_043137053.1;Ontology_term=GO:0019629,GO:0046421;gbkey=CDS;gene=prpB;go_function=methylisocitrate lyase activity|0046421||IEA;go_process=propionate catabolic process%2C 2-methylcitrate cycle|0019629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015377140.1;locus_tag=IY40_RS04995;product=methylisocitrate lyase;protein_id=WP_043137053.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 266317 267480 . + . ID=gene-IY40_RS05000;Name=prpC;gbkey=Gene;gene=prpC;gene_biotype=protein_coding;locus_tag=IY40_RS05000;old_locus_tag=IY40_05070 NZ_JPQY01000005.1 Protein Homology CDS 266317 267480 . + 0 ID=cds-WP_043137056.1;Parent=gene-IY40_RS05000;Dbxref=GenBank:WP_043137056.1;Name=WP_043137056.1;Ontology_term=GO:0019679,GO:0036440,GO:0050440;gbkey=CDS;gene=prpC;go_function=citrate synthase activity|0036440||IEA,2-methylcitrate synthase activity|0050440||IEA;go_process=propionate metabolic process%2C methylcitrate cycle|0019679||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019454634.1;locus_tag=IY40_RS05000;product=bifunctional 2-methylcitrate synthase/citrate synthase;protein_id=WP_043137056.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 267531 268982 . + . ID=gene-IY40_RS05005;Name=IY40_RS05005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS05005;old_locus_tag=IY40_05075 NZ_JPQY01000005.1 Protein Homology CDS 267531 268982 . + 0 ID=cds-WP_043137209.1;Parent=gene-IY40_RS05005;Dbxref=GenBank:WP_043137209.1;Name=WP_043137209.1;Ontology_term=GO:0019679,GO:0047547,GO:0051537;gbkey=CDS;go_function=2-methylcitrate dehydratase activity|0047547||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;go_process=propionate metabolic process%2C methylcitrate cycle|0019679||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004939290.1;locus_tag=IY40_RS05005;product=bifunctional 2-methylcitrate dehydratase/aconitate hydratase;protein_id=WP_043137209.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 269062 269691 . + . ID=gene-IY40_RS05010;Name=IY40_RS05010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS05010;old_locus_tag=IY40_05080 NZ_JPQY01000005.1 Protein Homology CDS 269062 269691 . + 0 ID=cds-WP_025302070.1;Parent=gene-IY40_RS05010;Dbxref=GenBank:WP_025302070.1;Name=WP_025302070.1;Ontology_term=GO:0006865,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004939288.1;locus_tag=IY40_RS05010;product=LysE family translocator;protein_id=WP_025302070.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 269688 270527 . - . ID=gene-IY40_RS05015;Name=IY40_RS05015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS05015;old_locus_tag=IY40_05085 NZ_JPQY01000005.1 Protein Homology CDS 269688 270527 . - 0 ID=cds-WP_043137060.1;Parent=gene-IY40_RS05015;Dbxref=GenBank:WP_043137060.1;Name=WP_043137060.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016928531.1;locus_tag=IY40_RS05015;product=helix-turn-helix transcriptional regulator;protein_id=WP_043137060.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 270627 272051 . + . ID=gene-IY40_RS05020;Name=IY40_RS05020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS05020;old_locus_tag=IY40_05090 NZ_JPQY01000005.1 Protein Homology CDS 270627 272051 . + 0 ID=cds-WP_043137064.1;Parent=gene-IY40_RS05020;Dbxref=GenBank:WP_043137064.1;Name=WP_043137064.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015377144.1;locus_tag=IY40_RS05020;product=MFS transporter;protein_id=WP_043137064.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 272108 272737 . + . ID=gene-IY40_RS05025;Name=IY40_RS05025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS05025;old_locus_tag=IY40_05095 NZ_JPQY01000005.1 Protein Homology CDS 272108 272737 . + 0 ID=cds-WP_043137069.1;Parent=gene-IY40_RS05025;Dbxref=GenBank:WP_043137069.1;Name=WP_043137069.1;Ontology_term=GO:0043934,GO:0010181;gbkey=CDS;go_function=FMN binding|0010181||IEA;go_process=sporulation|0043934||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016928529.1;locus_tag=IY40_RS05025;product=FMN-binding negative transcriptional regulator;protein_id=WP_043137069.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 272776 273735 . + . ID=gene-IY40_RS05030;Name=ybiB;gbkey=Gene;gene=ybiB;gene_biotype=protein_coding;locus_tag=IY40_RS05030;old_locus_tag=IY40_05100 NZ_JPQY01000005.1 Protein Homology CDS 272776 273735 . + 0 ID=cds-WP_043137073.1;Parent=gene-IY40_RS05030;Dbxref=GenBank:WP_043137073.1;Name=WP_043137073.1;gbkey=CDS;gene=ybiB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017892111.1;locus_tag=IY40_RS05030;product=DNA-binding protein YbiB;protein_id=WP_043137073.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 273782 275638 . + . ID=gene-IY40_RS05035;Name=IY40_RS05035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS05035;old_locus_tag=IY40_05105 NZ_JPQY01000005.1 Protein Homology CDS 273782 275638 . + 0 ID=cds-WP_043137077.1;Parent=gene-IY40_RS05035;Dbxref=GenBank:WP_043137077.1;Name=WP_043137077.1;Ontology_term=GO:0006508,GO:0004222;gbkey=CDS;go_function=metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014914972.1;locus_tag=IY40_RS05035;product=M3 family metallopeptidase;protein_id=WP_043137077.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 275702 276337 . - . ID=gene-IY40_RS05040;Name=IY40_RS05040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS05040;old_locus_tag=IY40_05110 NZ_JPQY01000005.1 Protein Homology CDS 275702 276337 . - 0 ID=cds-WP_004939270.1;Parent=gene-IY40_RS05040;Dbxref=GenBank:WP_004939270.1;Name=WP_004939270.1;Ontology_term=GO:0004089,GO:0008270;gbkey=CDS;go_function=carbonate dehydratase activity|0004089||IEA,zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227295.1;locus_tag=IY40_RS05040;product=carbonic anhydrase;protein_id=WP_004939270.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 276624 276884 . - . ID=gene-IY40_RS05045;Name=bhsA;gbkey=Gene;gene=bhsA;gene_biotype=protein_coding;locus_tag=IY40_RS05045;old_locus_tag=IY40_05115 NZ_JPQY01000005.1 Protein Homology CDS 276624 276884 . - 0 ID=cds-WP_025302077.1;Parent=gene-IY40_RS05045;Dbxref=GenBank:WP_025302077.1;Name=WP_025302077.1;Ontology_term=GO:0006950,GO:0046688;gbkey=CDS;gene=bhsA;go_process=response to stress|0006950||IEA,response to copper ion|0046688||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210240.1;locus_tag=IY40_RS05045;product=multiple stress resistance protein BhsA;protein_id=WP_025302077.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 277051 277680 . - . ID=gene-IY40_RS05050;Name=IY40_RS05050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS05050;old_locus_tag=IY40_05120 NZ_JPQY01000005.1 Protein Homology CDS 277051 277680 . - 0 ID=cds-WP_043137081.1;Parent=gene-IY40_RS05050;Dbxref=GenBank:WP_043137081.1;Name=WP_043137081.1;Ontology_term=GO:0010181,GO:0016491;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015377149.1;locus_tag=IY40_RS05050;product=flavin reductase family protein;protein_id=WP_043137081.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 277799 278764 . + . ID=gene-IY40_RS05055;Name=rlmF;gbkey=Gene;gene=rlmF;gene_biotype=protein_coding;locus_tag=IY40_RS05055;old_locus_tag=IY40_05125 NZ_JPQY01000005.1 Protein Homology CDS 277799 278764 . + 0 ID=cds-WP_167325058.1;Parent=gene-IY40_RS05055;Dbxref=GenBank:WP_167325058.1;Name=WP_167325058.1;Ontology_term=GO:0006364,GO:0008988;gbkey=CDS;gene=rlmF;go_function=rRNA (adenine-N6-)-methyltransferase activity|0008988||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015377150.1;locus_tag=IY40_RS05055;product=23S rRNA (adenine(1618)-N(6))-methyltransferase RlmF;protein_id=WP_167325058.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 279059 280363 . + . ID=gene-IY40_RS05060;Name=IY40_RS05060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS05060;old_locus_tag=IY40_05130 NZ_JPQY01000005.1 Protein Homology CDS 279059 280363 . + 0 ID=cds-WP_043137084.1;Parent=gene-IY40_RS05060;Dbxref=GenBank:WP_043137084.1;Name=WP_043137084.1;Ontology_term=GO:0006935,GO:0007165,GO:0004888,GO:0016020,GO:0098561;gbkey=CDS;go_component=membrane|0016020||IEA,methyl accepting chemotaxis protein complex|0098561||IEA;go_function=transmembrane signaling receptor activity|0004888||IEA;go_process=chemotaxis|0006935||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004939251.1;locus_tag=IY40_RS05060;product=methyl-accepting chemotaxis protein;protein_id=WP_043137084.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 280546 281115 . + . ID=gene-IY40_RS05065;Name=IY40_RS05065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS05065;old_locus_tag=IY40_05135 NZ_JPQY01000005.1 Protein Homology CDS 280546 281115 . + 0 ID=cds-WP_043137088.1;Parent=gene-IY40_RS05065;Dbxref=GenBank:WP_043137088.1;Name=WP_043137088.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019454624.1;locus_tag=IY40_RS05065;product=TetR/AcrR family transcriptional regulator;protein_id=WP_043137088.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 281127 281765 . + . ID=gene-IY40_RS05070;Name=IY40_RS05070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS05070;old_locus_tag=IY40_05140 NZ_JPQY01000005.1 Protein Homology CDS 281127 281765 . + 0 ID=cds-WP_025302082.1;Parent=gene-IY40_RS05070;Dbxref=GenBank:WP_025302082.1;Name=WP_025302082.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015377152.1;locus_tag=IY40_RS05070;product=GNAT family N-acetyltransferase;protein_id=WP_025302082.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 281753 282763 . + . ID=gene-IY40_RS05075;Name=IY40_RS05075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS05075;old_locus_tag=IY40_05145 NZ_JPQY01000005.1 Protein Homology CDS 281753 282763 . + 0 ID=cds-WP_043137091.1;Parent=gene-IY40_RS05075;Dbxref=GenBank:WP_043137091.1;Name=WP_043137091.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016928518.1;locus_tag=IY40_RS05075;product=alpha/beta hydrolase family protein;protein_id=WP_043137091.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 282766 284985 . - . ID=gene-IY40_RS05080;Name=ybiO;gbkey=Gene;gene=ybiO;gene_biotype=protein_coding;locus_tag=IY40_RS05080;old_locus_tag=IY40_05150 NZ_JPQY01000005.1 Protein Homology CDS 282766 284985 . - 0 ID=cds-WP_043137093.1;Parent=gene-IY40_RS05080;Dbxref=GenBank:WP_043137093.1;Name=WP_043137093.1;Ontology_term=GO:0055085;gbkey=CDS;gene=ybiO;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016928517.1;locus_tag=IY40_RS05080;product=mechanosensitive channel protein;protein_id=WP_043137093.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 285139 285861 . - . ID=gene-IY40_RS05085;Name=glnQ;gbkey=Gene;gene=glnQ;gene_biotype=protein_coding;locus_tag=IY40_RS05085;old_locus_tag=IY40_05155 NZ_JPQY01000005.1 Protein Homology CDS 285139 285861 . - 0 ID=cds-WP_004939230.1;Parent=gene-IY40_RS05085;Dbxref=GenBank:WP_004939230.1;Name=WP_004939230.1;Ontology_term=GO:0003333,GO:0005524,GO:0015424;gbkey=CDS;gene=glnQ;go_function=ATP binding|0005524||IEA,ABC-type amino acid transporter activity|0015424||IEA;go_process=amino acid transmembrane transport|0003333||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000569103.1;locus_tag=IY40_RS05085;product=glutamine ABC transporter ATP-binding protein GlnQ;protein_id=WP_004939230.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 285858 286517 . - . ID=gene-IY40_RS05090;Name=glnP;gbkey=Gene;gene=glnP;gene_biotype=protein_coding;locus_tag=IY40_RS05090;old_locus_tag=IY40_05160 NZ_JPQY01000005.1 Protein Homology CDS 285858 286517 . - 0 ID=cds-WP_019454487.1;Parent=gene-IY40_RS05090;Dbxref=GenBank:WP_019454487.1;Name=WP_019454487.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020,GO:0043190;gbkey=CDS;gene=glnP;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015367581.1;locus_tag=IY40_RS05090;product=glutamine ABC transporter permease GlnP;protein_id=WP_019454487.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 286621 287364 . - . ID=gene-IY40_RS05095;Name=glnH;gbkey=Gene;gene=glnH;gene_biotype=protein_coding;locus_tag=IY40_RS05095;old_locus_tag=IY40_05165 NZ_JPQY01000005.1 Protein Homology CDS 286621 287364 . - 0 ID=cds-WP_004939223.1;Parent=gene-IY40_RS05095;Dbxref=GenBank:WP_004939223.1;Name=WP_004939223.1;Ontology_term=GO:1903803,GO:0015599,GO:0043190;gbkey=CDS;gene=glnH;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled L-glutamine transmembrane transporter activity|0015599||IEA;go_process=L-glutamine import across plasma membrane|1903803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308916.1;locus_tag=IY40_RS05095;product=glutamine ABC transporter substrate-binding protein GlnH;protein_id=WP_004939223.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 287704 287970 . - . ID=gene-IY40_RS05100;Name=IY40_RS05100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS05100;old_locus_tag=IY40_05170 NZ_JPQY01000005.1 Protein Homology CDS 287704 287970 . - 0 ID=cds-WP_025302085.1;Parent=gene-IY40_RS05100;Dbxref=GenBank:WP_025302085.1;Name=WP_025302085.1;Ontology_term=GO:0008270;gbkey=CDS;go_function=zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006324337.1;locus_tag=IY40_RS05100;product=DksA/TraR family C4-type zinc finger protein;protein_id=WP_025302085.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 288113 288616 . - . ID=gene-IY40_RS05105;Name=dps;gbkey=Gene;gene=dps;gene_biotype=protein_coding;gene_synonym=pexB;locus_tag=IY40_RS05105;old_locus_tag=IY40_05175 NZ_JPQY01000005.1 Protein Homology CDS 288113 288616 . - 0 ID=cds-WP_043137097.1;Parent=gene-IY40_RS05105;Dbxref=GenBank:WP_043137097.1;Name=WP_043137097.1;Ontology_term=GO:0016722;gbkey=CDS;gene=dps;go_function=oxidoreductase activity%2C acting on metal ions|0016722||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012441920.1;locus_tag=IY40_RS05105;product=DNA starvation/stationary phase protection protein Dps;protein_id=WP_043137097.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 288973 289524 . + . ID=gene-IY40_RS05110;Name=IY40_RS05110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS05110;old_locus_tag=IY40_05180 NZ_JPQY01000005.1 Protein Homology CDS 288973 289524 . + 0 ID=cds-WP_025302087.1;Parent=gene-IY40_RS05110;Dbxref=GenBank:WP_025302087.1;Name=WP_025302087.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016928513.1;locus_tag=IY40_RS05110;product=AAA family ATPase;protein_id=WP_025302087.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 289506 289973 . - . ID=gene-IY40_RS05115;Name=nanQ;gbkey=Gene;gene=nanQ;gene_biotype=protein_coding;locus_tag=IY40_RS05115;old_locus_tag=IY40_05185 NZ_JPQY01000005.1 Protein Homology CDS 289506 289973 . - 0 ID=cds-WP_025302088.1;Parent=gene-IY40_RS05115;Dbxref=GenBank:WP_025302088.1;Name=WP_025302088.1;Ontology_term=GO:0006974;gbkey=CDS;gene=nanQ;go_process=DNA damage response|0006974||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015377157.1;locus_tag=IY40_RS05115;product=N-acetylneuraminate anomerase;protein_id=WP_025302088.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 290106 290993 . - . ID=gene-IY40_RS05120;Name=rhtA;gbkey=Gene;gene=rhtA;gene_biotype=protein_coding;locus_tag=IY40_RS05120;old_locus_tag=IY40_05190 NZ_JPQY01000005.1 Protein Homology CDS 290106 290993 . - 0 ID=cds-WP_025302089.1;Parent=gene-IY40_RS05120;Dbxref=GenBank:WP_025302089.1;Name=WP_025302089.1;gbkey=CDS;gene=rhtA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012303946.1;locus_tag=IY40_RS05120;product=threonine/homoserine exporter RhtA;protein_id=WP_025302089.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 291394 291912 . + . ID=gene-IY40_RS05125;Name=ompX;gbkey=Gene;gene=ompX;gene_biotype=protein_coding;locus_tag=IY40_RS05125;old_locus_tag=IY40_05195 NZ_JPQY01000005.1 Protein Homology CDS 291394 291912 . + 0 ID=cds-WP_019454480.1;Parent=gene-IY40_RS05125;Dbxref=GenBank:WP_019454480.1;Name=WP_019454480.1;gbkey=CDS;gene=ompX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210229.1;locus_tag=IY40_RS05125;product=outer membrane protein OmpX;protein_id=WP_019454480.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 291999 292982 . - . ID=gene-IY40_RS05130;Name=IY40_RS05130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS05130;old_locus_tag=IY40_05200 NZ_JPQY01000005.1 Protein Homology CDS 291999 292982 . - 0 ID=cds-WP_025302090.1;Parent=gene-IY40_RS05130;Dbxref=GenBank:WP_025302090.1;Name=WP_025302090.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019454479.1;locus_tag=IY40_RS05130;product=nitrilase family protein;protein_id=WP_025302090.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 293074 293946 . + . ID=gene-IY40_RS05135;Name=IY40_RS05135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS05135;old_locus_tag=IY40_05205 NZ_JPQY01000005.1 Protein Homology CDS 293074 293946 . + 0 ID=cds-WP_043137104.1;Parent=gene-IY40_RS05135;Dbxref=GenBank:WP_043137104.1;Name=WP_043137104.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019454478.1;locus_tag=IY40_RS05135;product=LysR family transcriptional regulator;protein_id=WP_043137104.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 293951 294481 . - . ID=gene-IY40_RS05140;Name=IY40_RS05140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS05140;old_locus_tag=IY40_05210 NZ_JPQY01000005.1 Protein Homology CDS 293951 294481 . - 0 ID=cds-WP_043137107.1;Parent=gene-IY40_RS05140;Dbxref=GenBank:WP_043137107.1;Name=WP_043137107.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012005920.1;locus_tag=IY40_RS05140;product=GNAT family N-acetyltransferase;protein_id=WP_043137107.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 294545 295915 . - . ID=gene-IY40_RS05145;Name=IY40_RS05145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS05145;old_locus_tag=IY40_05215 NZ_JPQY01000005.1 Protein Homology CDS 294545 295915 . - 0 ID=cds-WP_043137110.1;Parent=gene-IY40_RS05145;Dbxref=GenBank:WP_043137110.1;Name=WP_043137110.1;Ontology_term=GO:0035429,GO:0015128,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=gluconate transmembrane transporter activity|0015128||IEA;go_process=gluconate transmembrane transport|0035429||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417220.1;locus_tag=IY40_RS05145;product=GntP family transporter;protein_id=WP_043137110.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 296022 296798 . - . ID=gene-IY40_RS05150;Name=otnI;gbkey=Gene;gene=otnI;gene_biotype=protein_coding;locus_tag=IY40_RS05150;old_locus_tag=IY40_05220 NZ_JPQY01000005.1 Protein Homology CDS 296022 296798 . - 0 ID=cds-WP_025302094.1;Parent=gene-IY40_RS05150;Dbxref=GenBank:WP_025302094.1;Name=WP_025302094.1;Ontology_term=GO:0005975,GO:0016853;gbkey=CDS;gene=otnI;go_function=isomerase activity|0016853||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016928506.1;locus_tag=IY40_RS05150;product=2-oxo-tetronate isomerase;protein_id=WP_025302094.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 296802 297434 . - . ID=gene-IY40_RS05155;Name=otnC;gbkey=Gene;gene=otnC;gene_biotype=protein_coding;locus_tag=IY40_RS05155;old_locus_tag=IY40_05225 NZ_JPQY01000005.1 Protein Homology CDS 296802 297434 . - 0 ID=cds-WP_407862527.1;Parent=gene-IY40_RS05155;Dbxref=GenBank:WP_407862527.1;Name=WP_407862527.1;Ontology_term=GO:0005996,GO:0016829;gbkey=CDS;gene=otnC;go_function=lyase activity|0016829||IEA;go_process=monosaccharide metabolic process|0005996||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016928505.1;locus_tag=IY40_RS05155;product=3-oxo-tetronate 4-phosphate decarboxylase;protein_id=WP_407862527.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 297431 298690 . - . ID=gene-IY40_RS05160;Name=otnK;gbkey=Gene;gene=otnK;gene_biotype=protein_coding;locus_tag=IY40_RS05160;old_locus_tag=IY40_05230 NZ_JPQY01000005.1 Protein Homology CDS 297431 298690 . - 0 ID=cds-WP_080287113.1;Parent=gene-IY40_RS05160;Dbxref=GenBank:WP_080287113.1;Name=WP_080287113.1;Ontology_term=GO:0005975,GO:0005524,GO:0016301;gbkey=CDS;gene=otnK;go_function=ATP binding|0005524||IEA,kinase activity|0016301||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015377163.1;locus_tag=IY40_RS05160;product=3-oxo-tetronate kinase;protein_id=WP_080287113.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 298690 299604 . - . ID=gene-IY40_RS05165;Name=ltnD;gbkey=Gene;gene=ltnD;gene_biotype=protein_coding;locus_tag=IY40_RS05165;old_locus_tag=IY40_05235 NZ_JPQY01000005.1 Protein Homology CDS 298690 299604 . - 0 ID=cds-WP_043137117.1;Parent=gene-IY40_RS05165;Dbxref=GenBank:WP_043137117.1;Name=WP_043137117.1;Ontology_term=GO:0005975,GO:0016616;gbkey=CDS;gene=ltnD;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004939182.1;locus_tag=IY40_RS05165;product=L-threonate dehydrogenase;protein_id=WP_043137117.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 299888 300658 . + . ID=gene-IY40_RS05170;Name=ygbI;gbkey=Gene;gene=ygbI;gene_biotype=protein_coding;locus_tag=IY40_RS05170;old_locus_tag=IY40_05240 NZ_JPQY01000005.1 Protein Homology CDS 299888 300658 . + 0 ID=cds-WP_025302098.1;Parent=gene-IY40_RS05170;Dbxref=GenBank:WP_025302098.1;Name=WP_025302098.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=ygbI;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015377165.1;locus_tag=IY40_RS05170;product=DNA-binding transcriptional repressor YgbI;protein_id=WP_025302098.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 300672 300866 . - . ID=gene-IY40_RS26220;Name=IY40_RS26220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS26220 NZ_JPQY01000005.1 GeneMarkS-2+ CDS 300672 300866 . - 0 ID=cds-WP_154219752.1;Parent=gene-IY40_RS26220;Dbxref=GenBank:WP_154219752.1;Name=WP_154219752.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IY40_RS26220;product=hypothetical protein;protein_id=WP_154219752.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 301154 301921 . - . ID=gene-IY40_RS05175;Name=IY40_RS05175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS05175;old_locus_tag=IY40_05245 NZ_JPQY01000005.1 Protein Homology CDS 301154 301921 . - 0 ID=cds-WP_025302099.1;Parent=gene-IY40_RS05175;Dbxref=GenBank:WP_025302099.1;Name=WP_025302099.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004939173.1;locus_tag=IY40_RS05175;product=molybdopterin-dependent oxidoreductase;protein_id=WP_025302099.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 301914 302519 . - . ID=gene-IY40_RS05180;Name=IY40_RS05180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS05180;old_locus_tag=IY40_05250 NZ_JPQY01000005.1 Protein Homology CDS 301914 302519 . - 0 ID=cds-WP_043137121.1;Parent=gene-IY40_RS05180;Dbxref=GenBank:WP_043137121.1;Name=WP_043137121.1;Ontology_term=GO:0005506,GO:0009055,GO:0020037,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=iron ion binding|0005506||IEA,electron transfer activity|0009055||IEA,heme binding|0020037||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015377168.1;locus_tag=IY40_RS05180;product=cytochrome b/b6 domain-containing protein;protein_id=WP_043137121.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 302533 303159 . - . ID=gene-IY40_RS05185;Name=IY40_RS05185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS05185;old_locus_tag=IY40_05255 NZ_JPQY01000005.1 Protein Homology CDS 302533 303159 . - 0 ID=cds-WP_025302101.1;Parent=gene-IY40_RS05185;Dbxref=GenBank:WP_025302101.1;Name=WP_025302101.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016928498.1;locus_tag=IY40_RS05185;product=hypothetical protein;protein_id=WP_025302101.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 303300 303971 . + . ID=gene-IY40_RS05190;Name=IY40_RS05190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS05190;old_locus_tag=IY40_05260 NZ_JPQY01000005.1 Protein Homology CDS 303300 303971 . + 0 ID=cds-WP_021504273.1;Parent=gene-IY40_RS05190;Dbxref=GenBank:WP_021504273.1;Name=WP_021504273.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013315935.1;locus_tag=IY40_RS05190;product=heavy metal response regulator transcription factor;protein_id=WP_021504273.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 303968 305386 . + . ID=gene-IY40_RS05195;Name=IY40_RS05195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS05195;old_locus_tag=IY40_05265 NZ_JPQY01000005.1 Protein Homology CDS 303968 305386 . + 0 ID=cds-WP_043137129.1;Parent=gene-IY40_RS05195;Dbxref=GenBank:WP_043137129.1;Name=WP_043137129.1;Ontology_term=GO:0000160,GO:0016310,GO:0000155,GO:0004673,GO:0016772,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,transferase activity%2C transferring phosphorus-containing groups|0016772||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016928496.1;locus_tag=IY40_RS05195;product=heavy metal sensor histidine kinase;protein_id=WP_043137129.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 305400 306866 . - . ID=gene-IY40_RS05200;Name=IY40_RS05200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS05200;old_locus_tag=IY40_05270 NZ_JPQY01000005.1 Protein Homology CDS 305400 306866 . - 0 ID=cds-WP_043137132.1;Parent=gene-IY40_RS05200;Dbxref=GenBank:WP_043137132.1;Name=WP_043137132.1;Ontology_term=GO:0007165,GO:0000155,GO:0000156,GO:0004673,GO:0005524;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,phosphorelay response regulator activity|0000156||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006322104.1;locus_tag=IY40_RS05200;product=sensor histidine kinase;protein_id=WP_043137132.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 306870 307583 . - . ID=gene-IY40_RS05205;Name=IY40_RS05205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS05205;old_locus_tag=IY40_05275 NZ_JPQY01000005.1 Protein Homology CDS 306870 307583 . - 0 ID=cds-WP_043137136.1;Parent=gene-IY40_RS05205;Dbxref=GenBank:WP_043137136.1;Name=WP_043137136.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006322114.1;locus_tag=IY40_RS05205;product=response regulator transcription factor;protein_id=WP_043137136.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 307734 308345 . + . ID=gene-IY40_RS05210;Name=IY40_RS05210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS05210;old_locus_tag=IY40_05280 NZ_JPQY01000005.1 Protein Homology CDS 307734 308345 . + 0 ID=cds-WP_043137139.1;Parent=gene-IY40_RS05210;Dbxref=GenBank:WP_043137139.1;Name=WP_043137139.1;Ontology_term=GO:0005506,GO:0009055,GO:0020037,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=iron ion binding|0005506||IEA,electron transfer activity|0009055||IEA,heme binding|0020037||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006322115.1;locus_tag=IY40_RS05210;product=cytochrome b/b6 domain-containing protein;protein_id=WP_043137139.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 308356 309132 . + . ID=gene-IY40_RS05215;Name=IY40_RS05215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS05215;old_locus_tag=IY40_05285 NZ_JPQY01000005.1 Protein Homology CDS 308356 309132 . + 0 ID=cds-WP_043137143.1;Parent=gene-IY40_RS05215;Dbxref=GenBank:WP_043137143.1;Name=WP_043137143.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006324353.1;locus_tag=IY40_RS05215;product=molybdopterin-dependent oxidoreductase;protein_id=WP_043137143.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 309192 309482 . + . ID=gene-IY40_RS05220;Name=IY40_RS05220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS05220;old_locus_tag=IY40_05290 NZ_JPQY01000005.1 Protein Homology CDS 309192 309482 . + 0 ID=cds-WP_043137146.1;Parent=gene-IY40_RS05220;Dbxref=GenBank:WP_043137146.1;Name=WP_043137146.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004942270.1;locus_tag=IY40_RS05220;product=pentapeptide MXKDX repeat protein;protein_id=WP_043137146.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 309547 310017 . + . ID=gene-IY40_RS05225;Name=IY40_RS05225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS05225;old_locus_tag=IY40_05295 NZ_JPQY01000005.1 Protein Homology CDS 309547 310017 . + 0 ID=cds-WP_004939115.1;Parent=gene-IY40_RS05225;Dbxref=GenBank:WP_004939115.1;Name=WP_004939115.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004939115.1;locus_tag=IY40_RS05225;product=YkgB family protein;protein_id=WP_004939115.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 310062 312101 . - . ID=gene-IY40_RS05230;Name=IY40_RS05230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS05230;old_locus_tag=IY40_05300 NZ_JPQY01000005.1 Protein Homology CDS 310062 312101 . - 0 ID=cds-WP_004939112.1;Parent=gene-IY40_RS05230;Dbxref=GenBank:WP_004939112.1;Name=WP_004939112.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015671585.1;locus_tag=IY40_RS05230;product=choline transporter;protein_id=WP_004939112.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 312501 313103 . + . ID=gene-IY40_RS05235;Name=betI;gbkey=Gene;gene=betI;gene_biotype=protein_coding;locus_tag=IY40_RS05235;old_locus_tag=IY40_05305 NZ_JPQY01000005.1 Protein Homology CDS 312501 313103 . + 0 ID=cds-WP_025302109.1;Parent=gene-IY40_RS05235;Dbxref=GenBank:WP_025302109.1;Name=WP_025302109.1;Ontology_term=GO:0003677;gbkey=CDS;gene=betI;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004939107.1;locus_tag=IY40_RS05235;product=transcriptional regulator BetI;protein_id=WP_025302109.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 313118 314590 . + . ID=gene-IY40_RS05240;Name=betB;gbkey=Gene;gene=betB;gene_biotype=protein_coding;locus_tag=IY40_RS05240;old_locus_tag=IY40_05310 NZ_JPQY01000005.1 Protein Homology CDS 313118 314590 . + 0 ID=cds-WP_025302110.1;Parent=gene-IY40_RS05240;Dbxref=GenBank:WP_025302110.1;Name=WP_025302110.1;Ontology_term=GO:0019285,GO:0008802,GO:0046872;gbkey=CDS;gene=betB;go_function=betaine-aldehyde dehydrogenase (NAD+) activity|0008802||IEA,metal ion binding|0046872||IEA;go_process=glycine betaine biosynthetic process from choline|0019285||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012005947.1;locus_tag=IY40_RS05240;product=betaine-aldehyde dehydrogenase;protein_id=WP_025302110.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 314725 316392 . + . ID=gene-IY40_RS05245;Name=betA;gbkey=Gene;gene=betA;gene_biotype=protein_coding;locus_tag=IY40_RS05245;old_locus_tag=IY40_05315 NZ_JPQY01000005.1 Protein Homology CDS 314725 316392 . + 0 ID=cds-WP_043137153.1;Parent=gene-IY40_RS05245;Dbxref=GenBank:WP_043137153.1;Name=WP_043137153.1;Ontology_term=GO:0019285,GO:0008812;gbkey=CDS;gene=betA;go_function=choline dehydrogenase activity|0008812||IEA;go_process=glycine betaine biosynthetic process from choline|0019285||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016928485.1;locus_tag=IY40_RS05245;product=choline dehydrogenase;protein_id=WP_043137153.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 316502 318127 . - . ID=gene-IY40_RS05250;Name=IY40_RS05250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS05250;old_locus_tag=IY40_05320 NZ_JPQY01000005.1 Protein Homology CDS 316502 318127 . - 0 ID=cds-WP_043137156.1;Parent=gene-IY40_RS05250;Dbxref=GenBank:WP_043137156.1;Name=WP_043137156.1;Ontology_term=GO:0006537,GO:0015930,GO:0016638;gbkey=CDS;go_function=glutamate synthase activity|0015930||IEA,oxidoreductase activity%2C acting on the CH-NH2 group of donors|0016638||IEA;go_process=glutamate biosynthetic process|0006537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019454460.1;locus_tag=IY40_RS05250;product=FMN-binding glutamate synthase family protein;protein_id=WP_043137156.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 318314 318904 . - . ID=gene-IY40_RS05255;Name=IY40_RS05255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS05255;old_locus_tag=IY40_05325 NZ_JPQY01000005.1 Protein Homology CDS 318314 318904 . - 0 ID=cds-WP_004939094.1;Parent=gene-IY40_RS05255;Dbxref=GenBank:WP_004939094.1;Name=WP_004939094.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012005950.1;locus_tag=IY40_RS05255;product=LuxR family transcriptional regulator;protein_id=WP_004939094.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 318926 319642 . - . ID=gene-IY40_RS05260;Name=IY40_RS05260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS05260;old_locus_tag=IY40_05330 NZ_JPQY01000005.1 Protein Homology CDS 318926 319642 . - 0 ID=cds-WP_016928483.1;Parent=gene-IY40_RS05260;Dbxref=GenBank:WP_016928483.1;Name=WP_016928483.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004939091.1;locus_tag=IY40_RS05260;product=EAL domain-containing protein;protein_id=WP_016928483.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 320157 320699 . + . ID=gene-IY40_RS05265;Name=IY40_RS05265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS05265;old_locus_tag=IY40_05335 NZ_JPQY01000005.1 Protein Homology CDS 320157 320699 . + 0 ID=cds-WP_033647475.1;Parent=gene-IY40_RS05265;Dbxref=GenBank:WP_033647475.1;Name=WP_033647475.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_033647475.1;locus_tag=IY40_RS05265;product=fimbrial protein;protein_id=WP_033647475.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 320748 321434 . + . ID=gene-IY40_RS05270;Name=IY40_RS05270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS05270;old_locus_tag=IY40_05340 NZ_JPQY01000005.1 Protein Homology CDS 320748 321434 . + 0 ID=cds-WP_033650575.1;Parent=gene-IY40_RS05270;Dbxref=GenBank:WP_033650575.1;Name=WP_033650575.1;Ontology_term=GO:0006457,GO:0043711,GO:0030288;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_process=protein folding|0006457||IEA,pilus organization|0043711||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005283607.1;locus_tag=IY40_RS05270;product=fimbrial biogenesis chaperone;protein_id=WP_033650575.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 321447 324041 . + . ID=gene-IY40_RS05275;Name=IY40_RS05275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS05275;old_locus_tag=IY40_05345 NZ_JPQY01000005.1 Protein Homology CDS 321447 324041 . + 0 ID=cds-WP_043137171.1;Parent=gene-IY40_RS05275;Dbxref=GenBank:WP_043137171.1;Name=WP_043137171.1;Ontology_term=GO:0009297,GO:0015473,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=fimbrial usher porin activity|0015473||IEA;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015965677.1;locus_tag=IY40_RS05275;product=fimbria/pilus outer membrane usher protein;protein_id=WP_043137171.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 324056 325123 . + . ID=gene-IY40_RS05280;Name=IY40_RS05280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS05280;old_locus_tag=IY40_05350 NZ_JPQY01000005.1 Protein Homology CDS 324056 325123 . + 0 ID=cds-WP_043137216.1;Parent=gene-IY40_RS05280;Dbxref=GenBank:WP_043137216.1;Name=WP_043137216.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015870519.1;locus_tag=IY40_RS05280;product=fimbrial protein;protein_id=WP_043137216.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 325198 325656 . - . ID=gene-IY40_RS05285;Name=IY40_RS05285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS05285;old_locus_tag=IY40_05355 NZ_JPQY01000005.1 Protein Homology CDS 325198 325656 . - 0 ID=cds-WP_025302117.1;Parent=gene-IY40_RS05285;Dbxref=GenBank:WP_025302117.1;Name=WP_025302117.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004939075.1;locus_tag=IY40_RS05285;product=helix-turn-helix domain-containing protein;protein_id=WP_025302117.1;transl_table=11 NZ_JPQY01000005.1 RefSeq gene 325862 326804 . - . ID=gene-IY40_RS05290;Name=IY40_RS05290;end_range=326804,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS05290;partial=true NZ_JPQY01000005.1 Protein Homology CDS 325862 326804 . - 1 ID=cds-WP_043137174.1;Parent=gene-IY40_RS05290;Dbxref=GenBank:WP_043137174.1;Name=WP_043137174.1;Ontology_term=GO:0008924;end_range=326804,.;gbkey=CDS;go_function=L-malate dehydrogenase (quinone) activity|0008924||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004939070.1;locus_tag=IY40_RS05290;partial=true;product=malate:quinone oxidoreductase;protein_id=WP_043137174.1;transl_table=11 ##sequence-region NZ_JPQY01000006.1 1 88035 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=615 NZ_JPQY01000006.1 RefSeq region 1 88035 . + . ID=NZ_JPQY01000006.1:1..88035;Dbxref=taxon:615;collected-by=Mahloro H. Serepa%3B Vincent M. Gray;collection-date=2013-04-11;country=South Africa: North West Province;gbkey=Src;genome=genomic;identified-by=Mahloro H. Serepa%3B Vincent M. Gray;isolation-source=entomopathogenic nematode Oscheius sp. MCB living in soil;mol_type=genomic DNA;nat-host=Oscheius sp. MCB;strain=MCB NZ_JPQY01000006.1 RefSeq gene 3 1340 . + . ID=gene-IY40_RS05305;Name=IY40_RS05305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS05305 NZ_JPQY01000006.1 Protein Homology CDS 3 1340 . + 0 ID=cds-WP_080287114.1;Parent=gene-IY40_RS05305;Dbxref=GenBank:WP_080287114.1;Name=WP_080287114.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016927683.1;locus_tag=IY40_RS05305;product=amino acid permease;protein_id=WP_080287114.1;transl_table=11 NZ_JPQY01000006.1 RefSeq gene 1451 2071 . + . ID=gene-IY40_RS05310;Name=IY40_RS05310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS05310;old_locus_tag=IY40_05380 NZ_JPQY01000006.1 Protein Homology CDS 1451 2071 . + 0 ID=cds-WP_016927684.1;Parent=gene-IY40_RS05310;Dbxref=GenBank:WP_016927684.1;Name=WP_016927684.1;Ontology_term=GO:0006355,GO:0007165,GO:0003677,GO:0003700,GO:0005515,GO:0140110;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,protein binding|0005515||IEA,transcription regulator activity|0140110||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015377909.1;locus_tag=IY40_RS05310;product=helix-turn-helix transcriptional regulator;protein_id=WP_016927684.1;transl_table=11 NZ_JPQY01000006.1 RefSeq gene 2139 3053 . - . ID=gene-IY40_RS05315;Name=IY40_RS05315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS05315;old_locus_tag=IY40_05385 NZ_JPQY01000006.1 Protein Homology CDS 2139 3053 . - 0 ID=cds-WP_043137436.1;Parent=gene-IY40_RS05315;Dbxref=GenBank:WP_043137436.1;Name=WP_043137436.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014882905.1;locus_tag=IY40_RS05315;product=LysR substrate-binding domain-containing protein;protein_id=WP_043137436.1;transl_table=11 NZ_JPQY01000006.1 RefSeq gene 3230 4006 . + . ID=gene-IY40_RS05320;Name=IY40_RS05320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS05320;old_locus_tag=IY40_05390 NZ_JPQY01000006.1 Protein Homology CDS 3230 4006 . + 0 ID=cds-WP_043137268.1;Parent=gene-IY40_RS05320;Dbxref=GenBank:WP_043137268.1;Name=WP_043137268.1;Ontology_term=GO:0016491,GO:0070403;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007712986.1;locus_tag=IY40_RS05320;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_043137268.1;transl_table=11 NZ_JPQY01000006.1 RefSeq gene 4179 6368 . - . ID=gene-IY40_RS05325;Name=IY40_RS05325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS05325;old_locus_tag=IY40_05395 NZ_JPQY01000006.1 Protein Homology CDS 4179 6368 . - 0 ID=cds-WP_043137271.1;Parent=gene-IY40_RS05325;Dbxref=GenBank:WP_043137271.1;Name=WP_043137271.1;Ontology_term=GO:0015891,GO:0055085,GO:0015267,GO:0046872,GO:0009279,GO:0016020;gbkey=CDS;go_component=cell outer membrane|0009279||IEA,membrane|0016020||IEA;go_function=channel activity|0015267||IEA,metal ion binding|0046872||IEA;go_process=siderophore transport|0015891||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019455382.1;locus_tag=IY40_RS05325;product=TonB-dependent siderophore receptor;protein_id=WP_043137271.1;transl_table=11 NZ_JPQY01000006.1 RefSeq gene 6570 7877 . + . ID=gene-IY40_RS05330;Name=fes;gbkey=Gene;gene=fes;gene_biotype=protein_coding;locus_tag=IY40_RS05330;old_locus_tag=IY40_05400 NZ_JPQY01000006.1 Protein Homology CDS 6570 7877 . + 0 ID=cds-WP_235211360.1;Parent=gene-IY40_RS05330;Dbxref=GenBank:WP_235211360.1;Name=WP_235211360.1;Ontology_term=GO:0005506,GO:0008849;gbkey=CDS;gene=fes;go_function=iron ion binding|0005506||IEA,enterochelin esterase activity|0008849||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015377907.1;locus_tag=IY40_RS05330;product=enterochelin esterase;protein_id=WP_235211360.1;transl_table=11 NZ_JPQY01000006.1 RefSeq gene 7907 8131 . + . ID=gene-IY40_RS05335;Name=IY40_RS05335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS05335;old_locus_tag=IY40_05405 NZ_JPQY01000006.1 Protein Homology CDS 7907 8131 . + 0 ID=cds-WP_025302871.1;Parent=gene-IY40_RS05335;Dbxref=GenBank:WP_025302871.1;Name=WP_025302871.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004937955.1;locus_tag=IY40_RS05335;product=MbtH family protein;protein_id=WP_025302871.1;transl_table=11 NZ_JPQY01000006.1 RefSeq gene 8183 16693 . + . ID=gene-IY40_RS05340;Name=IY40_RS05340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS05340;old_locus_tag=IY40_05410 NZ_JPQY01000006.1 Protein Homology CDS 8183 16693 . + 0 ID=cds-WP_043137287.1;Parent=gene-IY40_RS05340;Dbxref=GenBank:WP_043137287.1;Name=WP_043137287.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004937954.1;locus_tag=IY40_RS05340;product=non-ribosomal peptide synthetase;protein_id=WP_043137287.1;transl_table=11 NZ_JPQY01000006.1 RefSeq gene 16754 18037 . + . ID=gene-IY40_RS05345;Name=entS;gbkey=Gene;gene=entS;gene_biotype=protein_coding;locus_tag=IY40_RS05345;old_locus_tag=IY40_05415 NZ_JPQY01000006.1 Protein Homology CDS 16754 18037 . + 0 ID=cds-WP_043137289.1;Parent=gene-IY40_RS05345;Dbxref=GenBank:WP_043137289.1;Name=WP_043137289.1;Ontology_term=GO:0042930,GO:0042931;gbkey=CDS;gene=entS;go_function=enterobactin transmembrane transporter activity|0042931||IEA;go_process=enterobactin transport|0042930||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016927690.1;locus_tag=IY40_RS05345;product=enterobactin transporter EntS;protein_id=WP_043137289.1;transl_table=11 NZ_JPQY01000006.1 RefSeq gene 18042 18401 . - . ID=gene-IY40_RS05350;Name=IY40_RS05350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS05350;old_locus_tag=IY40_05420 NZ_JPQY01000006.1 Protein Homology CDS 18042 18401 . - 0 ID=cds-WP_025302868.1;Parent=gene-IY40_RS05350;Dbxref=GenBank:WP_025302868.1;Name=WP_025302868.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016927691.1;locus_tag=IY40_RS05350;product=winged helix-turn-helix transcriptional regulator;protein_id=WP_025302868.1;transl_table=11 NZ_JPQY01000006.1 RefSeq gene 18504 19058 . + . ID=gene-IY40_RS05355;Name=IY40_RS05355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS05355;old_locus_tag=IY40_05425 NZ_JPQY01000006.1 Protein Homology CDS 18504 19058 . + 0 ID=cds-WP_043137298.1;Parent=gene-IY40_RS05355;Dbxref=GenBank:WP_043137298.1;Name=WP_043137298.1;Ontology_term=GO:0008753,GO:0009055,GO:0010181,GO:0050136;gbkey=CDS;go_function=NADPH dehydrogenase (quinone) activity|0008753||IEA,electron transfer activity|0009055||IEA,FMN binding|0010181||IEA,NADH dehydrogenase (quinone) (non-electrogenic) activity|0050136||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004944636.1;locus_tag=IY40_RS05355;product=NAD(P)H-dependent oxidoreductase;protein_id=WP_043137298.1;transl_table=11 NZ_JPQY01000006.1 RefSeq gene 19150 19800 . + . ID=gene-IY40_RS05360;Name=IY40_RS05360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS05360;old_locus_tag=IY40_05430 NZ_JPQY01000006.1 Protein Homology CDS 19150 19800 . + 0 ID=cds-WP_072008229.1;Parent=gene-IY40_RS05360;Dbxref=GenBank:WP_072008229.1;Name=WP_072008229.1;Ontology_term=GO:0006865,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019455375.1;locus_tag=IY40_RS05360;product=LysE family translocator;protein_id=WP_072008229.1;transl_table=11 NZ_JPQY01000006.1 RefSeq gene 19816 20592 . - . ID=gene-IY40_RS05365;Name=IY40_RS05365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS05365;old_locus_tag=IY40_05435 NZ_JPQY01000006.1 Protein Homology CDS 19816 20592 . - 0 ID=cds-WP_043137304.1;Parent=gene-IY40_RS05365;Dbxref=GenBank:WP_043137304.1;Name=WP_043137304.1;Ontology_term=GO:0008753,GO:0009055,GO:0010181,GO:0050136;gbkey=CDS;go_function=NADPH dehydrogenase (quinone) activity|0008753||IEA,electron transfer activity|0009055||IEA,FMN binding|0010181||IEA,NADH dehydrogenase (quinone) (non-electrogenic) activity|0050136||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016927694.1;locus_tag=IY40_RS05365;product=NAD(P)H-dependent oxidoreductase;protein_id=WP_043137304.1;transl_table=11 NZ_JPQY01000006.1 RefSeq gene 20677 21570 . + . ID=gene-IY40_RS05370;Name=IY40_RS05370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS05370;old_locus_tag=IY40_05440 NZ_JPQY01000006.1 Protein Homology CDS 20677 21570 . + 0 ID=cds-WP_043137307.1;Parent=gene-IY40_RS05370;Dbxref=GenBank:WP_043137307.1;Name=WP_043137307.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004937933.1;locus_tag=IY40_RS05370;product=LysR family transcriptional regulator;protein_id=WP_043137307.1;transl_table=11 NZ_JPQY01000006.1 RefSeq gene 21593 21754 . - . ID=gene-IY40_RS26355;Name=IY40_RS26355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS26355 NZ_JPQY01000006.1 Protein Homology CDS 21593 21754 . - 0 ID=cds-WP_162837924.1;Parent=gene-IY40_RS26355;Dbxref=GenBank:WP_162837924.1;Name=WP_162837924.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015377897.1;locus_tag=IY40_RS26355;product=hypothetical protein;protein_id=WP_162837924.1;transl_table=11 NZ_JPQY01000006.1 RefSeq gene 21896 23962 . - . ID=gene-IY40_RS05375;Name=IY40_RS05375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS05375;old_locus_tag=IY40_05450 NZ_JPQY01000006.1 Protein Homology CDS 21896 23962 . - 0 ID=cds-WP_043137310.1;Parent=gene-IY40_RS05375;Dbxref=GenBank:WP_043137310.1;Name=WP_043137310.1;Ontology_term=GO:0006825,GO:0005375,GO:0005507,GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;go_function=copper ion transmembrane transporter activity|0005375||IEA,copper ion binding|0005507||IEA;go_process=copper ion transport|0006825||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015377896.1;locus_tag=IY40_RS05375;product=TonB-dependent copper receptor;protein_id=WP_043137310.1;transl_table=11 NZ_JPQY01000006.1 RefSeq gene 24189 24590 . - . ID=gene-IY40_RS05380;Name=IY40_RS05380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS05380;old_locus_tag=IY40_05455 NZ_JPQY01000006.1 Protein Homology CDS 24189 24590 . - 0 ID=cds-WP_072008230.1;Parent=gene-IY40_RS05380;Dbxref=GenBank:WP_072008230.1;Name=WP_072008230.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017892865.1;locus_tag=IY40_RS05380;product=DUF2946 domain-containing protein;protein_id=WP_072008230.1;transl_table=11 NZ_JPQY01000006.1 RefSeq gene 24929 26230 . - . ID=gene-IY40_RS05385;Name=IY40_RS05385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS05385;old_locus_tag=IY40_05460 NZ_JPQY01000006.1 Protein Homology CDS 24929 26230 . - 0 ID=cds-WP_043137316.1;Parent=gene-IY40_RS05385;Dbxref=GenBank:WP_043137316.1;Name=WP_043137316.1;Ontology_term=GO:0016901,GO:0070968;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C quinone or similar compound as acceptor|0016901||IEA,pyrroloquinoline quinone binding|0070968||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016927700.1;locus_tag=IY40_RS05385;product=PQQ-dependent sugar dehydrogenase;protein_id=WP_043137316.1;transl_table=11 NZ_JPQY01000006.1 RefSeq gene 26241 26666 . - . ID=gene-IY40_RS05390;Name=IY40_RS05390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS05390;old_locus_tag=IY40_05465 NZ_JPQY01000006.1 Protein Homology CDS 26241 26666 . - 0 ID=cds-WP_025302860.1;Parent=gene-IY40_RS05390;Dbxref=GenBank:WP_025302860.1;Name=WP_025302860.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004937918.1;locus_tag=IY40_RS05390;product=DUF2231 domain-containing protein;protein_id=WP_025302860.1;transl_table=11 NZ_JPQY01000006.1 RefSeq gene 26835 27293 . + . ID=gene-IY40_RS05395;Name=IY40_RS05395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS05395;old_locus_tag=IY40_05470 NZ_JPQY01000006.1 Protein Homology CDS 26835 27293 . + 0 ID=cds-WP_025302859.1;Parent=gene-IY40_RS05395;Dbxref=GenBank:WP_025302859.1;Name=WP_025302859.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019455365.1;locus_tag=IY40_RS05395;product=YbaK/EbsC family protein;protein_id=WP_025302859.1;transl_table=11 NZ_JPQY01000006.1 RefSeq gene 27379 27756 . - . ID=gene-IY40_RS05400;Name=IY40_RS05400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS05400;old_locus_tag=IY40_05475 NZ_JPQY01000006.1 Protein Homology CDS 27379 27756 . - 0 ID=cds-WP_043137320.1;Parent=gene-IY40_RS05400;Dbxref=GenBank:WP_043137320.1;Name=WP_043137320.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004937912.1;locus_tag=IY40_RS05400;product=VOC family protein;protein_id=WP_043137320.1;transl_table=11 NZ_JPQY01000006.1 RefSeq gene 28069 28473 . + . ID=gene-IY40_RS05405;Name=IY40_RS05405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS05405 NZ_JPQY01000006.1 Protein Homology CDS 28069 28473 . + 0 ID=cds-WP_049207590.1;Parent=gene-IY40_RS05405;Dbxref=GenBank:WP_049207590.1;Name=WP_049207590.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007900257.1;locus_tag=IY40_RS05405;product=GrpB family protein;protein_id=WP_049207590.1;transl_table=11 NZ_JPQY01000006.1 RefSeq gene 28655 29035 . - . ID=gene-IY40_RS05410;Name=IY40_RS05410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS05410;old_locus_tag=IY40_05485 NZ_JPQY01000006.1 Protein Homology CDS 28655 29035 . - 0 ID=cds-WP_043137323.1;Parent=gene-IY40_RS05410;Dbxref=GenBank:WP_043137323.1;Name=WP_043137323.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004937905.1;locus_tag=IY40_RS05410;product=nuclear transport factor 2 family protein;protein_id=WP_043137323.1;transl_table=11 NZ_JPQY01000006.1 RefSeq gene 29122 29634 . - . ID=gene-IY40_RS05415;Name=IY40_RS05415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS05415;old_locus_tag=IY40_05490 NZ_JPQY01000006.1 Protein Homology CDS 29122 29634 . - 0 ID=cds-WP_043137327.1;Parent=gene-IY40_RS05415;Dbxref=GenBank:WP_043137327.1;Name=WP_043137327.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015377889.1;locus_tag=IY40_RS05415;product=hypothetical protein;protein_id=WP_043137327.1;transl_table=11 NZ_JPQY01000006.1 RefSeq gene 29674 30684 . - . ID=gene-IY40_RS05420;Name=IY40_RS05420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS05420;old_locus_tag=IY40_05495 NZ_JPQY01000006.1 Protein Homology CDS 29674 30684 . - 0 ID=cds-WP_043137331.1;Parent=gene-IY40_RS05420;Dbxref=GenBank:WP_043137331.1;Name=WP_043137331.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015377888.1;locus_tag=IY40_RS05420;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_043137331.1;transl_table=11 NZ_JPQY01000006.1 RefSeq gene 31002 31925 . + . ID=gene-IY40_RS05425;Name=IY40_RS05425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS05425;old_locus_tag=IY40_05500 NZ_JPQY01000006.1 Protein Homology CDS 31002 31925 . + 0 ID=cds-WP_043137335.1;Parent=gene-IY40_RS05425;Dbxref=GenBank:WP_043137335.1;Name=WP_043137335.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004937901.1;locus_tag=IY40_RS05425;product=substrate-binding domain-containing protein;protein_id=WP_043137335.1;transl_table=11 NZ_JPQY01000006.1 RefSeq gene 31993 33168 . + . ID=gene-IY40_RS05430;Name=IY40_RS05430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS05430;old_locus_tag=IY40_05505 NZ_JPQY01000006.1 Protein Homology CDS 31993 33168 . + 0 ID=cds-WP_043137340.1;Parent=gene-IY40_RS05430;Dbxref=GenBank:WP_043137340.1;Name=WP_043137340.1;Ontology_term=GO:0000166,GO:0003824;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019455359.1;locus_tag=IY40_RS05430;product=Gfo/Idh/MocA family protein;protein_id=WP_043137340.1;transl_table=11 NZ_JPQY01000006.1 RefSeq gene 33179 34120 . + . ID=gene-IY40_RS05435;Name=IY40_RS05435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS05435;old_locus_tag=IY40_05510 NZ_JPQY01000006.1 Protein Homology CDS 33179 34120 . + 0 ID=cds-WP_025302851.1;Parent=gene-IY40_RS05435;Dbxref=GenBank:WP_025302851.1;Name=WP_025302851.1;Ontology_term=GO:0003824,GO:0016853;gbkey=CDS;go_function=catalytic activity|0003824||IEA,isomerase activity|0016853||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016927715.1;locus_tag=IY40_RS05435;product=sugar phosphate isomerase/epimerase family protein;protein_id=WP_025302851.1;transl_table=11 NZ_JPQY01000006.1 RefSeq gene 34164 35249 . - . ID=gene-IY40_RS05440;Name=IY40_RS05440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS05440;old_locus_tag=IY40_05515 NZ_JPQY01000006.1 Protein Homology CDS 34164 35249 . - 0 ID=cds-WP_043137344.1;Parent=gene-IY40_RS05440;Dbxref=GenBank:WP_043137344.1;Name=WP_043137344.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015377881.1;locus_tag=IY40_RS05440;product=NAD(P)-dependent alcohol dehydrogenase;protein_id=WP_043137344.1;transl_table=11 NZ_JPQY01000006.1 RefSeq gene 35543 35956 . + . ID=gene-IY40_RS25070;Name=IY40_RS25070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS25070 NZ_JPQY01000006.1 Protein Homology CDS 35543 35956 . + 0 ID=cds-WP_049207593.1;Parent=gene-IY40_RS25070;Dbxref=GenBank:WP_049207593.1;Name=WP_049207593.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004937885.1;locus_tag=IY40_RS25070;product=energy transducer TonB;protein_id=WP_049207593.1;transl_table=11 NZ_JPQY01000006.1 RefSeq gene 35987 36301 . - . ID=gene-IY40_RS05445;Name=IY40_RS05445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS05445;old_locus_tag=IY40_05525 NZ_JPQY01000006.1 Protein Homology CDS 35987 36301 . - 0 ID=cds-WP_025302849.1;Parent=gene-IY40_RS05445;Dbxref=GenBank:WP_025302849.1;Name=WP_025302849.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016927717.1;locus_tag=IY40_RS05445;product=ArsR/SmtB family transcription factor;protein_id=WP_025302849.1;transl_table=11 NZ_JPQY01000006.1 RefSeq gene 36487 36909 . + . ID=gene-IY40_RS05450;Name=IY40_RS05450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS05450;old_locus_tag=IY40_05530 NZ_JPQY01000006.1 Protein Homology CDS 36487 36909 . + 0 ID=cds-WP_025302848.1;Parent=gene-IY40_RS05450;Dbxref=GenBank:WP_025302848.1;Name=WP_025302848.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016927718.1;locus_tag=IY40_RS05450;product=MAPEG family protein;protein_id=WP_025302848.1;transl_table=11 NZ_JPQY01000006.1 RefSeq gene 36906 37262 . + . ID=gene-IY40_RS05455;Name=IY40_RS05455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS05455 NZ_JPQY01000006.1 Protein Homology CDS 36906 37262 . + 0 ID=cds-WP_050505128.1;Parent=gene-IY40_RS05455;Dbxref=GenBank:WP_050505128.1;Name=WP_050505128.1;Ontology_term=GO:0015035;gbkey=CDS;go_function=protein-disulfide reductase activity|0015035||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004905250.1;locus_tag=IY40_RS05455;product=thioredoxin family protein;protein_id=WP_050505128.1;transl_table=11 NZ_JPQY01000006.1 RefSeq gene 37243 38778 . - . ID=gene-IY40_RS05460;Name=IY40_RS05460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS05460;old_locus_tag=IY40_05540 NZ_JPQY01000006.1 Protein Homology CDS 37243 38778 . - 0 ID=cds-WP_043137350.1;Parent=gene-IY40_RS05460;Dbxref=GenBank:WP_043137350.1;Name=WP_043137350.1;Ontology_term=GO:0032049,GO:0090483;gbkey=CDS;go_function=phosphatidylglycerol-phosphatidylethanolamine phosphatidyltransferase activity|0090483||IEA;go_process=cardiolipin biosynthetic process|0032049||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016927720.1;locus_tag=IY40_RS05460;product=phospholipase D family protein;protein_id=WP_043137350.1;transl_table=11 NZ_JPQY01000006.1 RefSeq gene 38865 39656 . - . ID=gene-IY40_RS05465;Name=IY40_RS05465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS05465;old_locus_tag=IY40_05545 NZ_JPQY01000006.1 Protein Homology CDS 38865 39656 . - 0 ID=cds-WP_025302842.1;Parent=gene-IY40_RS05465;Dbxref=GenBank:WP_025302842.1;Name=WP_025302842.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016927725.1;locus_tag=IY40_RS05465;product=AraC family transcriptional regulator;protein_id=WP_025302842.1;transl_table=11 NZ_JPQY01000006.1 RefSeq gene 40014 40331 . - . ID=gene-IY40_RS05470;Name=IY40_RS05470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS05470;old_locus_tag=IY40_05550 NZ_JPQY01000006.1 Protein Homology CDS 40014 40331 . - 0 ID=cds-WP_025302841.1;Parent=gene-IY40_RS05470;Dbxref=GenBank:WP_025302841.1;Name=WP_025302841.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019455354.1;locus_tag=IY40_RS05470;product=cupin domain-containing protein;protein_id=WP_025302841.1;transl_table=11 NZ_JPQY01000006.1 RefSeq gene 40324 41670 . - . ID=gene-IY40_RS05475;Name=IY40_RS05475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS05475 NZ_JPQY01000006.1 Protein Homology CDS 40324 41670 . - 0 ID=cds-WP_235211361.1;Parent=gene-IY40_RS05475;Dbxref=GenBank:WP_235211361.1;Name=WP_235211361.1;Ontology_term=GO:0016491,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: protein motif:HMM:NF013434.6;locus_tag=IY40_RS05475;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_235211361.1;transl_table=11 NZ_JPQY01000006.1 RefSeq gene 41709 42881 . - . ID=gene-IY40_RS05480;Name=IY40_RS05480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS05480;old_locus_tag=IY40_05560 NZ_JPQY01000006.1 Protein Homology CDS 41709 42881 . - 0 ID=cds-WP_225735576.1;Parent=gene-IY40_RS05480;Dbxref=GenBank:WP_225735576.1;Name=WP_225735576.1;Ontology_term=GO:0055085,GO:0015112,GO:0022857;gbkey=CDS;go_function=nitrate transmembrane transporter activity|0015112||IEA,transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015377876.1;locus_tag=IY40_RS05480;product=MFS transporter;protein_id=WP_225735576.1;transl_table=11 NZ_JPQY01000006.1 RefSeq gene 43063 43932 . + . ID=gene-IY40_RS05485;Name=IY40_RS05485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS05485;old_locus_tag=IY40_05570 NZ_JPQY01000006.1 Protein Homology CDS 43063 43932 . + 0 ID=cds-WP_043137356.1;Parent=gene-IY40_RS05485;Dbxref=GenBank:WP_043137356.1;Name=WP_043137356.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004937866.1;locus_tag=IY40_RS05485;product=LysR substrate-binding domain-containing protein;protein_id=WP_043137356.1;transl_table=11 NZ_JPQY01000006.1 RefSeq gene 44015 44422 . - . ID=gene-IY40_RS05490;Name=IY40_RS05490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS05490;old_locus_tag=IY40_05575 NZ_JPQY01000006.1 Protein Homology CDS 44015 44422 . - 0 ID=cds-WP_043137360.1;Parent=gene-IY40_RS05490;Dbxref=GenBank:WP_043137360.1;Name=WP_043137360.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004937864.1;locus_tag=IY40_RS05490;product=DUF2000 family protein;protein_id=WP_043137360.1;transl_table=11 NZ_JPQY01000006.1 RefSeq gene 44481 45329 . - . ID=gene-IY40_RS05495;Name=IY40_RS05495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS05495;old_locus_tag=IY40_05580 NZ_JPQY01000006.1 Protein Homology CDS 44481 45329 . - 0 ID=cds-WP_043137364.1;Parent=gene-IY40_RS05495;Dbxref=GenBank:WP_043137364.1;Name=WP_043137364.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019455348.1;locus_tag=IY40_RS05495;product=AraC family transcriptional regulator;protein_id=WP_043137364.1;transl_table=11 NZ_JPQY01000006.1 RefSeq gene 45401 47281 . - . ID=gene-IY40_RS05500;Name=IY40_RS05500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS05500;old_locus_tag=IY40_05585 NZ_JPQY01000006.1 Protein Homology CDS 45401 47281 . - 0 ID=cds-WP_043137367.1;Parent=gene-IY40_RS05500;Dbxref=GenBank:WP_043137367.1;Name=WP_043137367.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019455347.1;locus_tag=IY40_RS05500;product=diguanylate cyclase domain-containing protein;protein_id=WP_043137367.1;transl_table=11 NZ_JPQY01000006.1 cmsearch riboswitch 47462 47537 . + . ID=id-NZ_JPQY01000006.1:47462..47537;Dbxref=RFAM:RF01734;Note=Fluoride riboswitches increase expression of downstream genes that help mitigate the toxic effects of very high levels of fluoride%3B They are found in a wide variety of bacteria and archaea;bound_moiety=fluoride;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_JPQY01000006.1 RefSeq gene 47578 48543 . + . ID=gene-IY40_RS05505;Name=IY40_RS05505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS05505;old_locus_tag=IY40_05590 NZ_JPQY01000006.1 Protein Homology CDS 47578 48543 . + 0 ID=cds-WP_080287115.1;Parent=gene-IY40_RS05505;Dbxref=GenBank:WP_080287115.1;Name=WP_080287115.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004937853.1;locus_tag=IY40_RS05505;product=DHH family phosphoesterase;protein_id=WP_080287115.1;transl_table=11 NZ_JPQY01000006.1 RefSeq gene 48547 48975 . + . ID=gene-IY40_RS05510;Name=IY40_RS05510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS05510;old_locus_tag=IY40_05595 NZ_JPQY01000006.1 Protein Homology CDS 48547 48975 . + 0 ID=cds-WP_025302833.1;Parent=gene-IY40_RS05510;Dbxref=GenBank:WP_025302833.1;Name=WP_025302833.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016927735.1;locus_tag=IY40_RS05510;product=adenine nucleotide alpha hydrolase family protein;protein_id=WP_025302833.1;transl_table=11 NZ_JPQY01000006.1 RefSeq gene 48992 50275 . + . ID=gene-IY40_RS05515;Name=eno;gbkey=Gene;gene=eno;gene_biotype=protein_coding;locus_tag=IY40_RS05515;old_locus_tag=IY40_05600 NZ_JPQY01000006.1 Protein Homology CDS 48992 50275 . + 0 ID=cds-WP_043137369.1;Parent=gene-IY40_RS05515;Dbxref=GenBank:WP_043137369.1;Name=WP_043137369.1;Ontology_term=GO:0006096,GO:0000287,GO:0004634,GO:0000015;gbkey=CDS;gene=eno;go_component=phosphopyruvate hydratase complex|0000015||IEA;go_function=magnesium ion binding|0000287||IEA,phosphopyruvate hydratase activity|0004634||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015377870.1;locus_tag=IY40_RS05515;product=phosphopyruvate hydratase;protein_id=WP_043137369.1;transl_table=11 NZ_JPQY01000006.1 RefSeq gene 50272 50679 . - . ID=gene-IY40_RS05520;Name=IY40_RS05520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS05520;old_locus_tag=IY40_05605 NZ_JPQY01000006.1 Protein Homology CDS 50272 50679 . - 0 ID=cds-WP_025302831.1;Parent=gene-IY40_RS05520;Dbxref=GenBank:WP_025302831.1;Name=WP_025302831.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004937845.1;locus_tag=IY40_RS05520;product=MerR family transcriptional regulator;protein_id=WP_025302831.1;transl_table=11 NZ_JPQY01000006.1 RefSeq gene 50750 51970 . + . ID=gene-IY40_RS05525;Name=IY40_RS05525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS05525;old_locus_tag=IY40_05610 NZ_JPQY01000006.1 Protein Homology CDS 50750 51970 . + 0 ID=cds-WP_025302830.1;Parent=gene-IY40_RS05525;Dbxref=GenBank:WP_025302830.1;Name=WP_025302830.1;Ontology_term=GO:0010181,GO:0036382;gbkey=CDS;go_function=FMN binding|0010181||IEA,flavin reductase (NADH) activity|0036382||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016927738.1;locus_tag=IY40_RS05525;product=NADH:flavin oxidoreductase/NADH oxidase family protein;protein_id=WP_025302830.1;transl_table=11 NZ_JPQY01000006.1 RefSeq gene 52476 53858 . + . ID=gene-IY40_RS05530;Name=IY40_RS05530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS05530;old_locus_tag=IY40_05615 NZ_JPQY01000006.1 Protein Homology CDS 52476 53858 . + 0 ID=cds-WP_071826114.1;Parent=gene-IY40_RS05530;Dbxref=GenBank:WP_071826114.1;Name=WP_071826114.1;Ontology_term=GO:0009058,GO:0008483,GO:0030170;gbkey=CDS;go_function=transaminase activity|0008483||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017802287.1;locus_tag=IY40_RS05530;product=diaminobutyrate--2-oxoglutarate transaminase;protein_id=WP_071826114.1;transl_table=11 NZ_JPQY01000006.1 RefSeq gene 53877 55346 . + . ID=gene-IY40_RS05535;Name=IY40_RS05535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS05535;old_locus_tag=IY40_05620 NZ_JPQY01000006.1 Protein Homology CDS 53877 55346 . + 0 ID=cds-WP_043137457.1;Parent=gene-IY40_RS05535;Dbxref=GenBank:WP_043137457.1;Name=WP_043137457.1;Ontology_term=GO:0019752,GO:0016830,GO:0030170;gbkey=CDS;go_function=carbon-carbon lyase activity|0016830||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=carboxylic acid metabolic process|0019752||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004937836.1;locus_tag=IY40_RS05535;product=pyridoxal phosphate-dependent decarboxylase family protein;protein_id=WP_043137457.1;transl_table=11 NZ_JPQY01000006.1 RefSeq gene 55423 55950 . - . ID=gene-IY40_RS05540;Name=IY40_RS05540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS05540;old_locus_tag=IY40_05625 NZ_JPQY01000006.1 Protein Homology CDS 55423 55950 . - 0 ID=cds-WP_043137372.1;Parent=gene-IY40_RS05540;Dbxref=GenBank:WP_043137372.1;Name=WP_043137372.1;Ontology_term=GO:0051920;gbkey=CDS;go_function=peroxiredoxin activity|0051920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016927741.1;locus_tag=IY40_RS05540;product=carboxymuconolactone decarboxylase family protein;protein_id=WP_043137372.1;transl_table=11 NZ_JPQY01000006.1 RefSeq gene 55954 56742 . - . ID=gene-IY40_RS05545;Name=IY40_RS05545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS05545;old_locus_tag=IY40_05630 NZ_JPQY01000006.1 Protein Homology CDS 55954 56742 . - 0 ID=cds-WP_043137374.1;Parent=gene-IY40_RS05545;Dbxref=GenBank:WP_043137374.1;Name=WP_043137374.1;Ontology_term=GO:0016812,GO:0046872;gbkey=CDS;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds%2C in cyclic amides|0016812||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016927742.1;locus_tag=IY40_RS05545;product=cyclase family protein;protein_id=WP_043137374.1;transl_table=11 NZ_JPQY01000006.1 RefSeq gene 56849 57676 . + . ID=gene-IY40_RS05550;Name=IY40_RS05550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS05550;old_locus_tag=IY40_05635 NZ_JPQY01000006.1 Protein Homology CDS 56849 57676 . + 0 ID=cds-WP_043137377.1;Parent=gene-IY40_RS05550;Dbxref=GenBank:WP_043137377.1;Name=WP_043137377.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016927743.1;locus_tag=IY40_RS05550;product=helix-turn-helix domain-containing protein;protein_id=WP_043137377.1;transl_table=11 NZ_JPQY01000006.1 RefSeq gene 57746 58678 . + . ID=gene-IY40_RS05555;Name=IY40_RS05555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS05555;old_locus_tag=IY40_05640 NZ_JPQY01000006.1 Protein Homology CDS 57746 58678 . + 0 ID=cds-WP_043137378.1;Parent=gene-IY40_RS05555;Dbxref=GenBank:WP_043137378.1;Name=WP_043137378.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016927744.1;locus_tag=IY40_RS05555;product=LysR family transcriptional regulator;protein_id=WP_043137378.1;transl_table=11 NZ_JPQY01000006.1 RefSeq gene 58686 59327 . - . ID=gene-IY40_RS05560;Name=IY40_RS05560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS05560;old_locus_tag=IY40_05645 NZ_JPQY01000006.1 Protein Homology CDS 58686 59327 . - 0 ID=cds-WP_043137379.1;Parent=gene-IY40_RS05560;Dbxref=GenBank:WP_043137379.1;Name=WP_043137379.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016927745.1;locus_tag=IY40_RS05560;product=TetR family transcriptional regulator;protein_id=WP_043137379.1;transl_table=11 NZ_JPQY01000006.1 RefSeq gene 59421 60083 . + . ID=gene-IY40_RS05565;Name=IY40_RS05565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS05565;old_locus_tag=IY40_05650 NZ_JPQY01000006.1 Protein Homology CDS 59421 60083 . + 0 ID=cds-WP_043137382.1;Parent=gene-IY40_RS05565;Dbxref=GenBank:WP_043137382.1;Name=WP_043137382.1;Ontology_term=GO:0032259,GO:0008168,GO:0008171,GO:0008757,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,O-methyltransferase activity|0008171||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016927746.1;locus_tag=IY40_RS05565;product=O-methyltransferase;protein_id=WP_043137382.1;transl_table=11 NZ_JPQY01000006.1 RefSeq gene 60165 61214 . + . ID=gene-IY40_RS05570;Name=IY40_RS05570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS05570;old_locus_tag=IY40_05655 NZ_JPQY01000006.1 Protein Homology CDS 60165 61214 . + 0 ID=cds-WP_043137385.1;Parent=gene-IY40_RS05570;Dbxref=GenBank:WP_043137385.1;Name=WP_043137385.1;Ontology_term=GO:0006508,GO:0046872,GO:0070573;gbkey=CDS;go_function=metal ion binding|0046872||IEA,metallodipeptidase activity|0070573||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015377866.1;locus_tag=IY40_RS05570;product=dipeptidase;protein_id=WP_043137385.1;transl_table=11 NZ_JPQY01000006.1 RefSeq gene 61332 61409 . + . ID=gene-IY40_RS25075;Name=pqqA;gbkey=Gene;gene=pqqA;gene_biotype=protein_coding;locus_tag=IY40_RS25075 NZ_JPQY01000006.1 Protein Homology CDS 61332 61409 . + 0 ID=cds-WP_004937827.1;Parent=gene-IY40_RS25075;Dbxref=GenBank:WP_004937827.1;Name=WP_004937827.1;Ontology_term=GO:0018189,GO:0003824;gbkey=CDS;gene=pqqA;go_function=catalytic activity|0003824||IEA;go_process=pyrroloquinoline quinone biosynthetic process|0018189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004937827.1;locus_tag=IY40_RS25075;product=pyrroloquinoline quinone precursor peptide PqqA;protein_id=WP_004937827.1;transl_table=11 NZ_JPQY01000006.1 RefSeq gene 61468 62379 . + . ID=gene-IY40_RS05575;Name=pqqB;gbkey=Gene;gene=pqqB;gene_biotype=protein_coding;locus_tag=IY40_RS05575;old_locus_tag=IY40_05660 NZ_JPQY01000006.1 Protein Homology CDS 61468 62379 . + 0 ID=cds-WP_043137388.1;Parent=gene-IY40_RS05575;Dbxref=GenBank:WP_043137388.1;Name=WP_043137388.1;Ontology_term=GO:0018189;gbkey=CDS;gene=pqqB;go_process=pyrroloquinoline quinone biosynthetic process|0018189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007864956.1;locus_tag=IY40_RS05575;product=pyrroloquinoline quinone biosynthesis protein PqqB;protein_id=WP_043137388.1;transl_table=11 NZ_JPQY01000006.1 RefSeq gene 62389 63144 . + . ID=gene-IY40_RS05580;Name=pqqC;gbkey=Gene;gene=pqqC;gene_biotype=protein_coding;locus_tag=IY40_RS05580;old_locus_tag=IY40_05665 NZ_JPQY01000006.1 Protein Homology CDS 62389 63144 . + 0 ID=cds-WP_025302820.1;Parent=gene-IY40_RS05580;Dbxref=GenBank:WP_025302820.1;Name=WP_025302820.1;Ontology_term=GO:0018189;gbkey=CDS;gene=pqqC;go_process=pyrroloquinoline quinone biosynthetic process|0018189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015376769.1;locus_tag=IY40_RS05580;product=pyrroloquinoline-quinone synthase PqqC;protein_id=WP_025302820.1;transl_table=11 NZ_JPQY01000006.1 RefSeq gene 63144 63422 . + . ID=gene-IY40_RS05585;Name=pqqD;gbkey=Gene;gene=pqqD;gene_biotype=protein_coding;locus_tag=IY40_RS05585;old_locus_tag=IY40_05670 NZ_JPQY01000006.1 Protein Homology CDS 63144 63422 . + 0 ID=cds-WP_016927749.1;Parent=gene-IY40_RS05585;Dbxref=GenBank:WP_016927749.1;Name=WP_016927749.1;Ontology_term=GO:0018189,GO:0048038;gbkey=CDS;gene=pqqD;go_function=quinone binding|0048038||IEA;go_process=pyrroloquinoline quinone biosynthetic process|0018189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015376770.1;locus_tag=IY40_RS05585;product=pyrroloquinoline quinone biosynthesis peptide chaperone PqqD;protein_id=WP_016927749.1;transl_table=11 NZ_JPQY01000006.1 RefSeq gene 63415 64551 . + . ID=gene-IY40_RS05590;Name=pqqE;gbkey=Gene;gene=pqqE;gene_biotype=protein_coding;locus_tag=IY40_RS05590;old_locus_tag=IY40_05675 NZ_JPQY01000006.1 Protein Homology CDS 63415 64551 . + 0 ID=cds-WP_025302818.1;Parent=gene-IY40_RS05590;Dbxref=GenBank:WP_025302818.1;Name=WP_025302818.1;Ontology_term=GO:0018149,GO:0018189,GO:0051539;gbkey=CDS;gene=pqqE;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=peptide cross-linking|0018149||IEA,pyrroloquinoline quinone biosynthetic process|0018189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015376771.1;locus_tag=IY40_RS05590;product=pyrroloquinoline quinone biosynthesis protein PqqE;protein_id=WP_025302818.1;transl_table=11 NZ_JPQY01000006.1 RefSeq gene 64554 66875 . + . ID=gene-IY40_RS05595;Name=pqqF;gbkey=Gene;gene=pqqF;gene_biotype=protein_coding;locus_tag=IY40_RS05595;old_locus_tag=IY40_05680 NZ_JPQY01000006.1 Protein Homology CDS 64554 66875 . + 0 ID=cds-WP_043137392.1;Parent=gene-IY40_RS05595;Dbxref=GenBank:WP_043137392.1;Name=WP_043137392.1;Ontology_term=GO:0006508,GO:0018189,GO:0004222,GO:0008270;gbkey=CDS;gene=pqqF;go_function=metalloendopeptidase activity|0004222||IEA,zinc ion binding|0008270||IEA;go_process=proteolysis|0006508||IEA,pyrroloquinoline quinone biosynthetic process|0018189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016927751.1;locus_tag=IY40_RS05595;product=pyrroloquinoline quinone biosynthesis protein PqqF;protein_id=WP_043137392.1;transl_table=11 NZ_JPQY01000006.1 RefSeq gene 66872 68257 . - . ID=gene-IY40_RS05600;Name=IY40_RS05600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS05600;old_locus_tag=IY40_05685 NZ_JPQY01000006.1 Protein Homology CDS 66872 68257 . - 0 ID=cds-WP_043137395.1;Parent=gene-IY40_RS05600;Dbxref=GenBank:WP_043137395.1;Name=WP_043137395.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004963046.1;locus_tag=IY40_RS05600;product=purine-cytosine permease family protein;protein_id=WP_043137395.1;transl_table=11 NZ_JPQY01000006.1 RefSeq gene 68419 69885 . - . ID=gene-IY40_RS05605;Name=IY40_RS05605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS05605;old_locus_tag=IY40_05690 NZ_JPQY01000006.1 Protein Homology CDS 68419 69885 . - 0 ID=cds-WP_043137398.1;Parent=gene-IY40_RS05605;Dbxref=GenBank:WP_043137398.1;Name=WP_043137398.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015703488.1;locus_tag=IY40_RS05605;product=aldehyde dehydrogenase;protein_id=WP_043137398.1;transl_table=11 NZ_JPQY01000006.1 RefSeq gene 69897 70934 . - . ID=gene-IY40_RS05610;Name=IY40_RS05610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS05610;old_locus_tag=IY40_05695 NZ_JPQY01000006.1 Protein Homology CDS 69897 70934 . - 0 ID=cds-WP_043137401.1;Parent=gene-IY40_RS05610;Dbxref=GenBank:WP_043137401.1;Name=WP_043137401.1;Ontology_term=GO:0010181,GO:0016491,GO:0070967;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA,coenzyme F420 binding|0070967||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004963040.1;locus_tag=IY40_RS05610;product=LLM class flavin-dependent oxidoreductase;protein_id=WP_043137401.1;transl_table=11 NZ_JPQY01000006.1 RefSeq gene 70954 71883 . - . ID=gene-IY40_RS05615;Name=IY40_RS05615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS05615;old_locus_tag=IY40_05700 NZ_JPQY01000006.1 Protein Homology CDS 70954 71883 . - 0 ID=cds-WP_043137404.1;Parent=gene-IY40_RS05615;Dbxref=GenBank:WP_043137404.1;Name=WP_043137404.1;Ontology_term=GO:0010181;gbkey=CDS;go_function=FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015703490.1;locus_tag=IY40_RS05615;product=flavin reductase family protein;protein_id=WP_043137404.1;transl_table=11 NZ_JPQY01000006.1 RefSeq gene 71870 72697 . - . ID=gene-IY40_RS05620;Name=IY40_RS05620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS05620;old_locus_tag=IY40_05705 NZ_JPQY01000006.1 Protein Homology CDS 71870 72697 . - 0 ID=cds-WP_043137407.1;Parent=gene-IY40_RS05620;Dbxref=GenBank:WP_043137407.1;Name=WP_043137407.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004963030.1;locus_tag=IY40_RS05620;product=alpha/beta fold hydrolase;protein_id=WP_043137407.1;transl_table=11 NZ_JPQY01000006.1 RefSeq gene 72669 73271 . - . ID=gene-IY40_RS05625;Name=IY40_RS05625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS05625;old_locus_tag=IY40_05710 NZ_JPQY01000006.1 Protein Homology CDS 72669 73271 . - 0 ID=cds-WP_043137410.1;Parent=gene-IY40_RS05625;Dbxref=GenBank:WP_043137410.1;Name=WP_043137410.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015703492.1;locus_tag=IY40_RS05625;product=amino acid synthesis family protein;protein_id=WP_043137410.1;transl_table=11 NZ_JPQY01000006.1 RefSeq gene 73610 74404 . + . ID=gene-IY40_RS05630;Name=IY40_RS05630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS05630;old_locus_tag=IY40_05715 NZ_JPQY01000006.1 Protein Homology CDS 73610 74404 . + 0 ID=cds-WP_225735574.1;Parent=gene-IY40_RS05630;Dbxref=GenBank:WP_225735574.1;Name=WP_225735574.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004963020.1;locus_tag=IY40_RS05630;product=GntR family transcriptional regulator;protein_id=WP_225735574.1;transl_table=11 NZ_JPQY01000006.1 RefSeq gene 74406 74702 . + . ID=gene-IY40_RS05635;Name=IY40_RS05635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS05635;old_locus_tag=IY40_05720 NZ_JPQY01000006.1 Protein Homology CDS 74406 74702 . + 0 ID=cds-WP_043137417.1;Parent=gene-IY40_RS05635;Dbxref=GenBank:WP_043137417.1;Name=WP_043137417.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015703494.1;locus_tag=IY40_RS05635;product=DUF1330 domain-containing protein;protein_id=WP_043137417.1;transl_table=11 NZ_JPQY01000006.1 RefSeq gene 74757 77792 . - . ID=gene-IY40_RS05640;Name=IY40_RS05640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS05640;old_locus_tag=IY40_05725 NZ_JPQY01000006.1 Protein Homology CDS 74757 77792 . - 0 ID=cds-WP_043137421.1;Parent=gene-IY40_RS05640;Dbxref=GenBank:WP_043137421.1;Name=WP_043137421.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016927752.1;locus_tag=IY40_RS05640;product=autotransporter domain-containing protein;protein_id=WP_043137421.1;transl_table=11 NZ_JPQY01000006.1 RefSeq gene 78700 80793 . + . ID=gene-IY40_RS05645;Name=IY40_RS05645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS05645;old_locus_tag=IY40_05730 NZ_JPQY01000006.1 Protein Homology CDS 78700 80793 . + 0 ID=cds-WP_043137424.1;Parent=gene-IY40_RS05645;Dbxref=GenBank:WP_043137424.1;Name=WP_043137424.1;Ontology_term=GO:0005525,GO:0046872,GO:0052621,GO:0071111,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=GTP binding|0005525||IEA,metal ion binding|0046872||IEA,diguanylate cyclase activity|0052621||IEA,cyclic-guanylate-specific phosphodiesterase activity|0071111||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016927753.1;locus_tag=IY40_RS05645;product=putative bifunctional diguanylate cyclase/phosphodiesterase;protein_id=WP_043137424.1;transl_table=11 NZ_JPQY01000006.1 RefSeq gene 80790 81986 . - . ID=gene-IY40_RS05650;Name=IY40_RS05650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS05650;old_locus_tag=IY40_05735 NZ_JPQY01000006.1 Protein Homology CDS 80790 81986 . - 0 ID=cds-WP_043137426.1;Parent=gene-IY40_RS05650;Dbxref=GenBank:WP_043137426.1;Name=WP_043137426.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016927754.1;locus_tag=IY40_RS05650;product=MFS transporter;protein_id=WP_043137426.1;transl_table=11 NZ_JPQY01000006.1 RefSeq gene 82136 83053 . + . ID=gene-IY40_RS05655;Name=IY40_RS05655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS05655;old_locus_tag=IY40_05740 NZ_JPQY01000006.1 Protein Homology CDS 82136 83053 . + 0 ID=cds-WP_021504584.1;Parent=gene-IY40_RS05655;Dbxref=GenBank:WP_021504584.1;Name=WP_021504584.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004928531.1;locus_tag=IY40_RS05655;product=ABC transporter substrate-binding protein;protein_id=WP_021504584.1;transl_table=11 NZ_JPQY01000006.1 RefSeq gene 83109 84887 . - . ID=gene-IY40_RS05660;Name=IY40_RS05660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS05660;old_locus_tag=IY40_05745 NZ_JPQY01000006.1 Protein Homology CDS 83109 84887 . - 0 ID=cds-WP_043137429.1;Parent=gene-IY40_RS05660;Dbxref=GenBank:WP_043137429.1;Name=WP_043137429.1;Ontology_term=GO:0000160,GO:0006355,GO:0005524,GO:0043565;gbkey=CDS;go_function=ATP binding|0005524||IEA,sequence-specific DNA binding|0043565||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015377855.1;locus_tag=IY40_RS05660;product=sigma-54-dependent Fis family transcriptional regulator;protein_id=WP_043137429.1;transl_table=11 NZ_JPQY01000006.1 RefSeq gene 85164 86684 . + . ID=gene-IY40_RS05665;Name=exaC;gbkey=Gene;gene=exaC;gene_biotype=protein_coding;locus_tag=IY40_RS05665;old_locus_tag=IY40_05750 NZ_JPQY01000006.1 Protein Homology CDS 85164 86684 . + 0 ID=cds-WP_043137433.1;Parent=gene-IY40_RS05665;Dbxref=GenBank:WP_043137433.1;Name=WP_043137433.1;Ontology_term=GO:0006068,GO:0004029;gbkey=CDS;gene=exaC;go_function=aldehyde dehydrogenase (NAD+) activity|0004029||IEA;go_process=ethanol catabolic process|0006068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015370094.1;locus_tag=IY40_RS05665;product=acetaldehyde dehydrogenase ExaC;protein_id=WP_043137433.1;transl_table=11 NZ_JPQY01000006.1 RefSeq gene 86737 87753 . - . ID=gene-IY40_RS05670;Name=adhP;gbkey=Gene;gene=adhP;gene_biotype=protein_coding;locus_tag=IY40_RS05670;old_locus_tag=IY40_05755 NZ_JPQY01000006.1 Protein Homology CDS 86737 87753 . - 0 ID=cds-WP_004928541.1;Parent=gene-IY40_RS05670;Dbxref=GenBank:WP_004928541.1;Name=WP_004928541.1;gbkey=CDS;gene=adhP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004928541.1;locus_tag=IY40_RS05670;product=alcohol dehydrogenase AdhP;protein_id=WP_004928541.1;transl_table=11 ##sequence-region NZ_JPQY01000007.1 1 50348 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=615 NZ_JPQY01000007.1 RefSeq region 1 50348 . + . ID=NZ_JPQY01000007.1:1..50348;Dbxref=taxon:615;collected-by=Mahloro H. Serepa%3B Vincent M. Gray;collection-date=2013-04-11;country=South Africa: North West Province;gbkey=Src;genome=genomic;identified-by=Mahloro H. Serepa%3B Vincent M. Gray;isolation-source=entomopathogenic nematode Oscheius sp. MCB living in soil;mol_type=genomic DNA;nat-host=Oscheius sp. MCB;strain=MCB NZ_JPQY01000007.1 RefSeq gene 203 736 . - . ID=gene-IY40_RS05675;Name=hemG;gbkey=Gene;gene=hemG;gene_biotype=protein_coding;locus_tag=IY40_RS05675;old_locus_tag=IY40_05760 NZ_JPQY01000007.1 Protein Homology CDS 203 736 . - 0 ID=cds-WP_043137471.1;Parent=gene-IY40_RS05675;Dbxref=GenBank:WP_043137471.1;Name=WP_043137471.1;gbkey=CDS;gene=hemG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012004735.1;locus_tag=IY40_RS05675;product=menaquinone-dependent protoporphyrinogen IX dehydrogenase;protein_id=WP_043137471.1;transl_table=11 NZ_JPQY01000007.1 RefSeq gene 758 2209 . - . ID=gene-IY40_RS05680;Name=trkH;gbkey=Gene;gene=trkH;gene_biotype=protein_coding;locus_tag=IY40_RS05680;old_locus_tag=IY40_05765 NZ_JPQY01000007.1 Protein Homology CDS 758 2209 . - 0 ID=cds-WP_025304932.1;Parent=gene-IY40_RS05680;Dbxref=GenBank:WP_025304932.1;Name=WP_025304932.1;gbkey=CDS;gene=trkH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312804.1;locus_tag=IY40_RS05680;product=Trk system potassium transporter TrkH;protein_id=WP_025304932.1;transl_table=11 NZ_JPQY01000007.1 RefSeq gene 2245 2859 . - . ID=gene-IY40_RS05685;Name=IY40_RS05685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS05685;old_locus_tag=IY40_05770 NZ_JPQY01000007.1 Protein Homology CDS 2245 2859 . - 0 ID=cds-WP_016929437.1;Parent=gene-IY40_RS05685;Dbxref=GenBank:WP_016929437.1;Name=WP_016929437.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013649073.1;locus_tag=IY40_RS05685;product=IMPACT family protein;protein_id=WP_016929437.1;transl_table=11 NZ_JPQY01000007.1 RefSeq gene 2859 4190 . - . ID=gene-IY40_RS05690;Name=pepQ;gbkey=Gene;gene=pepQ;gene_biotype=protein_coding;locus_tag=IY40_RS05690;old_locus_tag=IY40_05775 NZ_JPQY01000007.1 Protein Homology CDS 2859 4190 . - 0 ID=cds-WP_043137478.1;Parent=gene-IY40_RS05690;Dbxref=GenBank:WP_043137478.1;Name=WP_043137478.1;gbkey=CDS;gene=pepQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211547.1;locus_tag=IY40_RS05690;product=Xaa-Pro dipeptidase;protein_id=WP_043137478.1;transl_table=11 NZ_JPQY01000007.1 RefSeq gene 4303 5499 . - . ID=gene-IY40_RS05695;Name=IY40_RS05695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS05695;old_locus_tag=IY40_05780 NZ_JPQY01000007.1 Protein Homology CDS 4303 5499 . - 0 ID=cds-WP_043137482.1;Parent=gene-IY40_RS05695;Dbxref=GenBank:WP_043137482.1;Name=WP_043137482.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004951044.1;locus_tag=IY40_RS05695;product=MFS transporter;protein_id=WP_043137482.1;transl_table=11 NZ_JPQY01000007.1 RefSeq gene 5733 7922 . + . ID=gene-IY40_RS05700;Name=fadB;gbkey=Gene;gene=fadB;gene_biotype=protein_coding;locus_tag=IY40_RS05700;old_locus_tag=IY40_05785 NZ_JPQY01000007.1 Protein Homology CDS 5733 7922 . + 0 ID=cds-WP_043137486.1;Parent=gene-IY40_RS05700;Dbxref=GenBank:WP_043137486.1;Name=WP_043137486.1;Ontology_term=GO:0006631,GO:0016491,GO:0070403;gbkey=CDS;gene=fadB;go_function=oxidoreductase activity|0016491||IEA,NAD+ binding|0070403||IEA;go_process=fatty acid metabolic process|0006631||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005274741.1;locus_tag=IY40_RS05700;product=fatty acid oxidation complex subunit alpha FadB;protein_id=WP_043137486.1;transl_table=11 NZ_JPQY01000007.1 RefSeq gene 7933 9096 . + . ID=gene-IY40_RS05705;Name=fadA;gbkey=Gene;gene=fadA;gene_biotype=protein_coding;locus_tag=IY40_RS05705;old_locus_tag=IY40_05790 NZ_JPQY01000007.1 Protein Homology CDS 7933 9096 . + 0 ID=cds-WP_025304928.1;Parent=gene-IY40_RS05705;Dbxref=GenBank:WP_025304928.1;Name=WP_025304928.1;Ontology_term=GO:0006631,GO:0003988;gbkey=CDS;gene=fadA;go_function=acetyl-CoA C-acyltransferase activity|0003988||IEA;go_process=fatty acid metabolic process|0006631||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012440011.1;locus_tag=IY40_RS05705;product=acetyl-CoA C-acyltransferase FadA;protein_id=WP_025304928.1;transl_table=11 NZ_JPQY01000007.1 RefSeq gene 9269 9970 . - . ID=gene-IY40_RS05710;Name=fre;gbkey=Gene;gene=fre;gene_biotype=protein_coding;locus_tag=IY40_RS05710;old_locus_tag=IY40_05795 NZ_JPQY01000007.1 Protein Homology CDS 9269 9970 . - 0 ID=cds-WP_025304927.1;Parent=gene-IY40_RS05710;Dbxref=GenBank:WP_025304927.1;Name=WP_025304927.1;Ontology_term=GO:0016491;gbkey=CDS;gene=fre;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004934474.1;locus_tag=IY40_RS05710;product=NAD(P)H-flavin reductase;protein_id=WP_025304927.1;transl_table=11 NZ_JPQY01000007.1 RefSeq gene 10021 11517 . - . ID=gene-IY40_RS05715;Name=ubiD;gbkey=Gene;gene=ubiD;gene_biotype=protein_coding;locus_tag=IY40_RS05715;old_locus_tag=IY40_05800 NZ_JPQY01000007.1 Protein Homology CDS 10021 11517 . - 0 ID=cds-WP_025304926.1;Parent=gene-IY40_RS05715;Dbxref=GenBank:WP_025304926.1;Name=WP_025304926.1;Ontology_term=GO:0016831;gbkey=CDS;gene=ubiD;go_function=carboxy-lyase activity|0016831||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016929443.1;locus_tag=IY40_RS05715;product=4-hydroxy-3-polyprenylbenzoate decarboxylase;protein_id=WP_025304926.1;transl_table=11 NZ_JPQY01000007.1 RefSeq gene 11604 12329 . - . ID=gene-IY40_RS05720;Name=pepE;gbkey=Gene;gene=pepE;gene_biotype=protein_coding;locus_tag=IY40_RS05720;old_locus_tag=IY40_05805 NZ_JPQY01000007.1 Protein Homology CDS 11604 12329 . - 0 ID=cds-WP_025304925.1;Parent=gene-IY40_RS05720;Dbxref=GenBank:WP_025304925.1;Name=WP_025304925.1;Ontology_term=GO:0006508,GO:0008236;gbkey=CDS;gene=pepE;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015376308.1;locus_tag=IY40_RS05720;product=dipeptidase PepE;protein_id=WP_025304925.1;transl_table=11 NZ_JPQY01000007.1 RefSeq gene 12576 13064 . + . ID=gene-IY40_RS05725;Name=rfaH;gbkey=Gene;gene=rfaH;gene_biotype=protein_coding;locus_tag=IY40_RS05725;old_locus_tag=IY40_05810 NZ_JPQY01000007.1 Protein Homology CDS 12576 13064 . + 0 ID=cds-WP_025304924.1;Parent=gene-IY40_RS05725;Dbxref=GenBank:WP_025304924.1;Name=WP_025304924.1;Ontology_term=GO:0006355;gbkey=CDS;gene=rfaH;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012004725.1;locus_tag=IY40_RS05725;product=transcription/translation regulatory transformer protein RfaH;protein_id=WP_025304924.1;transl_table=11 NZ_JPQY01000007.1 RefSeq gene 13110 14132 . - . ID=gene-IY40_RS05730;Name=hemB;gbkey=Gene;gene=hemB;gene_biotype=protein_coding;locus_tag=IY40_RS05730;old_locus_tag=IY40_05815 NZ_JPQY01000007.1 Protein Homology CDS 13110 14132 . - 0 ID=cds-WP_043137494.1;Parent=gene-IY40_RS05730;Dbxref=GenBank:WP_043137494.1;Name=WP_043137494.1;Ontology_term=GO:0033014,GO:0003824,GO:0004655,GO:0046872;gbkey=CDS;gene=hemB;go_function=catalytic activity|0003824||IEA,porphobilinogen synthase activity|0004655||IEA,metal ion binding|0046872||IEA;go_process=tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013649068.1;locus_tag=IY40_RS05730;product=porphobilinogen synthase;protein_id=WP_043137494.1;transl_table=11 NZ_JPQY01000007.1 RefSeq gene 14147 14929 . - . ID=gene-IY40_RS05735;Name=tatD;gbkey=Gene;gene=tatD;gene_biotype=protein_coding;locus_tag=IY40_RS05735;old_locus_tag=IY40_05820 NZ_JPQY01000007.1 Protein Homology CDS 14147 14929 . - 0 ID=cds-WP_043137497.1;Parent=gene-IY40_RS05735;Dbxref=GenBank:WP_043137497.1;Name=WP_043137497.1;Ontology_term=GO:0008408;gbkey=CDS;gene=tatD;go_function=3'-5' exonuclease activity|0008408||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005187843.1;locus_tag=IY40_RS05735;product=3'-5' ssDNA/RNA exonuclease TatD;protein_id=WP_043137497.1;transl_table=11 NZ_JPQY01000007.1 RefSeq gene 14982 15752 . - . ID=gene-IY40_RS05740;Name=tatC;gbkey=Gene;gene=tatC;gene_biotype=protein_coding;locus_tag=IY40_RS05740;old_locus_tag=IY40_05825 NZ_JPQY01000007.1 Protein Homology CDS 14982 15752 . - 0 ID=cds-WP_004934456.1;Parent=gene-IY40_RS05740;Dbxref=GenBank:WP_004934456.1;Name=WP_004934456.1;gbkey=CDS;gene=tatC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211538.1;locus_tag=IY40_RS05740;product=Sec-independent protein translocase subunit TatC;protein_id=WP_004934456.1;transl_table=11 NZ_JPQY01000007.1 RefSeq gene 15756 16301 . - . ID=gene-IY40_RS05745;Name=tatB;gbkey=Gene;gene=tatB;gene_biotype=protein_coding;locus_tag=IY40_RS05745;old_locus_tag=IY40_05830 NZ_JPQY01000007.1 Protein Homology CDS 15756 16301 . - 0 ID=cds-WP_025304921.1;Parent=gene-IY40_RS05745;Dbxref=GenBank:WP_025304921.1;Name=WP_025304921.1;Ontology_term=GO:0015628,GO:0008320,GO:0016020;gbkey=CDS;gene=tatB;go_component=membrane|0016020||IEA;go_function=protein transmembrane transporter activity|0008320||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004934455.1;locus_tag=IY40_RS05745;product=Sec-independent protein translocase protein TatB;protein_id=WP_025304921.1;transl_table=11 NZ_JPQY01000007.1 RefSeq gene 16305 16568 . - . ID=gene-IY40_RS05750;Name=tatA;gbkey=Gene;gene=tatA;gene_biotype=protein_coding;locus_tag=IY40_RS05750;old_locus_tag=IY40_05835 NZ_JPQY01000007.1 Protein Homology CDS 16305 16568 . - 0 ID=cds-WP_004934452.1;Parent=gene-IY40_RS05750;Dbxref=GenBank:WP_004934452.1;Name=WP_004934452.1;gbkey=CDS;gene=tatA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011148500.1;locus_tag=IY40_RS05750;product=Sec-independent protein translocase subunit TatA;protein_id=WP_004934452.1;transl_table=11 NZ_JPQY01000007.1 RefSeq gene 16649 18280 . - . ID=gene-IY40_RS05755;Name=ubiB;gbkey=Gene;gene=ubiB;gene_biotype=protein_coding;locus_tag=IY40_RS05755;old_locus_tag=IY40_05840 NZ_JPQY01000007.1 Protein Homology CDS 16649 18280 . - 0 ID=cds-WP_025304920.1;Parent=gene-IY40_RS05755;Dbxref=GenBank:WP_025304920.1;Name=WP_025304920.1;Ontology_term=GO:0006744;gbkey=CDS;gene=ubiB;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011815371.1;locus_tag=IY40_RS05755;product=ubiquinone biosynthesis regulatory protein kinase UbiB;protein_id=WP_025304920.1;transl_table=11 NZ_JPQY01000007.1 RefSeq gene 18277 18885 . - . ID=gene-IY40_RS05760;Name=ubiJ;gbkey=Gene;gene=ubiJ;gene_biotype=protein_coding;locus_tag=IY40_RS05760;old_locus_tag=IY40_05845 NZ_JPQY01000007.1 Protein Homology CDS 18277 18885 . - 0 ID=cds-WP_025304919.1;Parent=gene-IY40_RS05760;Dbxref=GenBank:WP_025304919.1;Name=WP_025304919.1;Ontology_term=GO:0006744;gbkey=CDS;gene=ubiJ;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006323096.1;locus_tag=IY40_RS05760;product=ubiquinone biosynthesis protein UbiJ;protein_id=WP_025304919.1;transl_table=11 NZ_JPQY01000007.1 RefSeq gene 18899 19654 . - . ID=gene-IY40_RS05765;Name=ubiE;gbkey=Gene;gene=ubiE;gene_biotype=protein_coding;locus_tag=IY40_RS05765;old_locus_tag=IY40_05850 NZ_JPQY01000007.1 Protein Homology CDS 18899 19654 . - 0 ID=cds-WP_025304918.1;Parent=gene-IY40_RS05765;Dbxref=GenBank:WP_025304918.1;Name=WP_025304918.1;Ontology_term=GO:0008168;gbkey=CDS;gene=ubiE;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019080147.1;locus_tag=IY40_RS05765;product=bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1%2C4-benzoquinol methylase UbiE;protein_id=WP_025304918.1;transl_table=11 NZ_JPQY01000007.1 RefSeq gene 19733 21280 . - . ID=gene-IY40_RS05770;Name=rmuC;gbkey=Gene;gene=rmuC;gene_biotype=protein_coding;locus_tag=IY40_RS05770;old_locus_tag=IY40_05855 NZ_JPQY01000007.1 Protein Homology CDS 19733 21280 . - 0 ID=cds-WP_043137505.1;Parent=gene-IY40_RS05770;Dbxref=GenBank:WP_043137505.1;Name=WP_043137505.1;gbkey=CDS;gene=rmuC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004934441.1;locus_tag=IY40_RS05770;product=DNA recombination protein RmuC;protein_id=WP_043137505.1;transl_table=11 NZ_JPQY01000007.1 RefSeq gene 21421 21951 . - . ID=gene-IY40_RS05775;Name=IY40_RS05775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS05775;old_locus_tag=IY40_05860 NZ_JPQY01000007.1 Protein Homology CDS 21421 21951 . - 0 ID=cds-WP_004934438.1;Parent=gene-IY40_RS05775;Dbxref=GenBank:WP_004934438.1;Name=WP_004934438.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011191541.1;locus_tag=IY40_RS05775;product=DedA family protein;protein_id=WP_004934438.1;transl_table=11 NZ_JPQY01000007.1 RefSeq gene 22031 22813 . - . ID=gene-IY40_RS05780;Name=IY40_RS05780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS05780;old_locus_tag=IY40_05865 NZ_JPQY01000007.1 Protein Homology CDS 22031 22813 . - 0 ID=cds-WP_025304916.1;Parent=gene-IY40_RS05780;Dbxref=GenBank:WP_025304916.1;Name=WP_025304916.1;Ontology_term=GO:0004721,GO:0004725;gbkey=CDS;go_function=phosphoprotein phosphatase activity|0004721||IEA,protein tyrosine phosphatase activity|0004725||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006323093.1;locus_tag=IY40_RS05780;product=tyrosine-protein phosphatase;protein_id=WP_025304916.1;transl_table=11 NZ_JPQY01000007.1 RefSeq gene 23108 23869 . - . ID=gene-IY40_RS05785;Name=udp;gbkey=Gene;gene=udp;gene_biotype=protein_coding;locus_tag=IY40_RS05785;old_locus_tag=IY40_05870 NZ_JPQY01000007.1 Protein Homology CDS 23108 23869 . - 0 ID=cds-WP_004934432.1;Parent=gene-IY40_RS05785;Dbxref=GenBank:WP_004934432.1;Name=WP_004934432.1;Ontology_term=GO:0009116,GO:0016763;gbkey=CDS;gene=udp;go_function=pentosyltransferase activity|0016763||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462853.1;locus_tag=IY40_RS05785;product=uridine phosphorylase;protein_id=WP_004934432.1;transl_table=11 NZ_JPQY01000007.1 RefSeq gene 24359 25186 . + . ID=gene-IY40_RS05790;Name=IY40_RS05790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS05790;old_locus_tag=IY40_05875 NZ_JPQY01000007.1 Protein Homology CDS 24359 25186 . + 0 ID=cds-WP_043137508.1;Parent=gene-IY40_RS05790;Dbxref=GenBank:WP_043137508.1;Name=WP_043137508.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015376301.1;locus_tag=IY40_RS05790;product=dienelactone hydrolase family protein;protein_id=WP_043137508.1;transl_table=11 NZ_JPQY01000007.1 RefSeq gene 25271 27559 . - . ID=gene-IY40_RS05795;Name=metE;gbkey=Gene;gene=metE;gene_biotype=protein_coding;locus_tag=IY40_RS05795;old_locus_tag=IY40_05880 NZ_JPQY01000007.1 Protein Homology CDS 25271 27559 . - 0 ID=cds-WP_072008231.1;Parent=gene-IY40_RS05795;Dbxref=GenBank:WP_072008231.1;Name=WP_072008231.1;Ontology_term=GO:0008652,GO:0009086,GO:0003871,GO:0008270;gbkey=CDS;gene=metE;go_function=5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity|0003871||IEA,zinc ion binding|0008270||IEA;go_process=amino acid biosynthetic process|0008652||IEA,methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015376300.1;locus_tag=IY40_RS05795;product=5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase;protein_id=WP_072008231.1;transl_table=11 NZ_JPQY01000007.1 RefSeq gene 27650 28594 . + . ID=gene-IY40_RS05800;Name=metR;gbkey=Gene;gene=metR;gene_biotype=protein_coding;locus_tag=IY40_RS05800;old_locus_tag=IY40_05885 NZ_JPQY01000007.1 Protein Homology CDS 27650 28594 . + 0 ID=cds-WP_016929455.1;Parent=gene-IY40_RS05800;Dbxref=GenBank:WP_016929455.1;Name=WP_016929455.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=metR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004934422.1;locus_tag=IY40_RS05800;product=HTH-type transcriptional regulator MetR;protein_id=WP_016929455.1;transl_table=11 NZ_JPQY01000007.1 RefSeq gene 28610 29470 . - . ID=gene-IY40_RS05805;Name=IY40_RS05805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS05805;old_locus_tag=IY40_05890 NZ_JPQY01000007.1 Protein Homology CDS 28610 29470 . - 0 ID=cds-WP_025304913.1;Parent=gene-IY40_RS05805;Dbxref=GenBank:WP_025304913.1;Name=WP_025304913.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016929456.1;locus_tag=IY40_RS05805;product=carboxylate/amino acid/amine transporter;protein_id=WP_025304913.1;transl_table=11 NZ_JPQY01000007.1 RefSeq gene 29622 29951 . + . ID=gene-IY40_RS05810;Name=IY40_RS05810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS05810;old_locus_tag=IY40_05895 NZ_JPQY01000007.1 Protein Homology CDS 29622 29951 . + 0 ID=cds-WP_043137515.1;Parent=gene-IY40_RS05810;Dbxref=GenBank:WP_043137515.1;Name=WP_043137515.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016929457.1;locus_tag=IY40_RS05810;product=hypothetical protein;protein_id=WP_043137515.1;transl_table=11 NZ_JPQY01000007.1 RefSeq gene 29932 30888 . - . ID=gene-IY40_RS05815;Name=IY40_RS05815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS05815;old_locus_tag=IY40_05900 NZ_JPQY01000007.1 Protein Homology CDS 29932 30888 . - 0 ID=cds-WP_025304911.1;Parent=gene-IY40_RS05815;Dbxref=GenBank:WP_025304911.1;Name=WP_025304911.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015376296.1;locus_tag=IY40_RS05815;product=AEC family transporter;protein_id=WP_025304911.1;transl_table=11 NZ_JPQY01000007.1 RefSeq gene 30949 31686 . - . ID=gene-IY40_RS05820;Name=ugpQ;gbkey=Gene;gene=ugpQ;gene_biotype=protein_coding;locus_tag=IY40_RS05820;old_locus_tag=IY40_05905 NZ_JPQY01000007.1 Protein Homology CDS 30949 31686 . - 0 ID=cds-WP_025304910.1;Parent=gene-IY40_RS05820;Dbxref=GenBank:WP_025304910.1;Name=WP_025304910.1;Ontology_term=GO:0006629,GO:0008081;gbkey=CDS;gene=ugpQ;go_function=phosphoric diester hydrolase activity|0008081||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019455299.1;locus_tag=IY40_RS05820;product=glycerophosphodiester phosphodiesterase;protein_id=WP_025304910.1;transl_table=11 NZ_JPQY01000007.1 RefSeq gene 31686 32756 . - . ID=gene-IY40_RS05825;Name=IY40_RS05825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS05825;old_locus_tag=IY40_05910 NZ_JPQY01000007.1 Protein Homology CDS 31686 32756 . - 0 ID=cds-WP_043137521.1;Parent=gene-IY40_RS05825;Dbxref=GenBank:WP_043137521.1;Name=WP_043137521.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004934406.1;locus_tag=IY40_RS05825;product=sn-glycerol-3-phosphate import ATP-binding protein UgpC;protein_id=WP_043137521.1;transl_table=11 NZ_JPQY01000007.1 RefSeq gene 32762 33607 . - . ID=gene-IY40_RS05830;Name=ugpE;gbkey=Gene;gene=ugpE;gene_biotype=protein_coding;locus_tag=IY40_RS05830;old_locus_tag=IY40_05915 NZ_JPQY01000007.1 Protein Homology CDS 32762 33607 . - 0 ID=cds-WP_025304908.1;Parent=gene-IY40_RS05830;Dbxref=GenBank:WP_025304908.1;Name=WP_025304908.1;Ontology_term=GO:0015794,GO:0005886,GO:0055052;gbkey=CDS;gene=ugpE;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_process=glycerol-3-phosphate transmembrane transport|0015794||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211522.1;locus_tag=IY40_RS05830;product=sn-glycerol-3-phosphate ABC transporter permease UgpE;protein_id=WP_025304908.1;transl_table=11 NZ_JPQY01000007.1 RefSeq gene 33604 34491 . - . ID=gene-IY40_RS05835;Name=ugpA;gbkey=Gene;gene=ugpA;gene_biotype=protein_coding;locus_tag=IY40_RS05835;old_locus_tag=IY40_05920 NZ_JPQY01000007.1 Protein Homology CDS 33604 34491 . - 0 ID=cds-WP_015376293.1;Parent=gene-IY40_RS05835;Dbxref=GenBank:WP_015376293.1;Name=WP_015376293.1;gbkey=CDS;gene=ugpA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004703935.1;locus_tag=IY40_RS05835;product=sn-glycerol-3-phosphate ABC transporter permease UgpA;protein_id=WP_015376293.1;transl_table=11 NZ_JPQY01000007.1 RefSeq gene 34570 35889 . - . ID=gene-IY40_RS05840;Name=ugpB;gbkey=Gene;gene=ugpB;gene_biotype=protein_coding;locus_tag=IY40_RS05840;old_locus_tag=IY40_05925 NZ_JPQY01000007.1 Protein Homology CDS 34570 35889 . - 0 ID=cds-WP_033636688.1;Parent=gene-IY40_RS05840;Dbxref=GenBank:WP_033636688.1;Name=WP_033636688.1;Ontology_term=GO:0055085;gbkey=CDS;gene=ugpB;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004710220.1;locus_tag=IY40_RS05840;product=sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB;protein_id=WP_033636688.1;transl_table=11 NZ_JPQY01000007.1 RefSeq gene 36077 37264 . - . ID=gene-IY40_RS05845;Name=IY40_RS05845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS05845;old_locus_tag=IY40_05930 NZ_JPQY01000007.1 Protein Homology CDS 36077 37264 . - 0 ID=cds-WP_043137529.1;Parent=gene-IY40_RS05845;Dbxref=GenBank:WP_043137529.1;Name=WP_043137529.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019455304.1;locus_tag=IY40_RS05845;product=aminotransferase-like domain-containing protein;protein_id=WP_043137529.1;transl_table=11 NZ_JPQY01000007.1 RefSeq gene 37309 38010 . - . ID=gene-IY40_RS05850;Name=livF;gbkey=Gene;gene=livF;gene_biotype=protein_coding;locus_tag=IY40_RS05850;old_locus_tag=IY40_05935 NZ_JPQY01000007.1 Protein Homology CDS 37309 38010 . - 0 ID=cds-WP_025304905.1;Parent=gene-IY40_RS05850;Dbxref=GenBank:WP_025304905.1;Name=WP_025304905.1;gbkey=CDS;gene=livF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004957566.1;locus_tag=IY40_RS05850;product=high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivF;protein_id=WP_025304905.1;transl_table=11 NZ_JPQY01000007.1 RefSeq gene 38012 38782 . - . ID=gene-IY40_RS05855;Name=livG;gbkey=Gene;gene=livG;gene_biotype=protein_coding;locus_tag=IY40_RS05855;old_locus_tag=IY40_05940 NZ_JPQY01000007.1 Protein Homology CDS 38012 38782 . - 0 ID=cds-WP_025304904.1;Parent=gene-IY40_RS05855;Dbxref=GenBank:WP_025304904.1;Name=WP_025304904.1;Ontology_term=GO:0005524;gbkey=CDS;gene=livG;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015376291.1;locus_tag=IY40_RS05855;product=high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG;protein_id=WP_025304904.1;transl_table=11 NZ_JPQY01000007.1 RefSeq gene 38779 40062 . - . ID=gene-IY40_RS05860;Name=IY40_RS05860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS05860;old_locus_tag=IY40_05945 NZ_JPQY01000007.1 Protein Homology CDS 38779 40062 . - 0 ID=cds-WP_025304903.1;Parent=gene-IY40_RS05860;Dbxref=GenBank:WP_025304903.1;Name=WP_025304903.1;Ontology_term=GO:0015658,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=branched-chain amino acid transmembrane transporter activity|0015658||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017891301.1;locus_tag=IY40_RS05860;product=high-affinity branched-chain amino acid ABC transporter permease LivM;protein_id=WP_025304903.1;transl_table=11 NZ_JPQY01000007.1 RefSeq gene 40059 40985 . - . ID=gene-IY40_RS05865;Name=livH;gbkey=Gene;gene=livH;gene_biotype=protein_coding;locus_tag=IY40_RS05865;old_locus_tag=IY40_05950 NZ_JPQY01000007.1 Protein Homology CDS 40059 40985 . - 0 ID=cds-WP_015376290.1;Parent=gene-IY40_RS05865;Dbxref=GenBank:WP_015376290.1;Name=WP_015376290.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=livH;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229272.1;locus_tag=IY40_RS05865;product=high-affinity branched-chain amino acid ABC transporter permease LivH;protein_id=WP_015376290.1;transl_table=11 NZ_JPQY01000007.1 RefSeq gene 41103 42218 . - . ID=gene-IY40_RS05870;Name=IY40_RS05870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS05870;old_locus_tag=IY40_05955 NZ_JPQY01000007.1 Protein Homology CDS 41103 42218 . - 0 ID=cds-WP_025304902.1;Parent=gene-IY40_RS05870;Dbxref=GenBank:WP_025304902.1;Name=WP_025304902.1;Ontology_term=GO:0015803,GO:0055085,GO:0015658,GO:0022857,GO:0140359;gbkey=CDS;go_function=branched-chain amino acid transmembrane transporter activity|0015658||IEA,transmembrane transporter activity|0022857||IEA,ABC-type transporter activity|0140359||IEA;go_process=branched-chain amino acid transport|0015803||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011191523.1;locus_tag=IY40_RS05870;product=branched-chain amino acid ABC transporter substrate-binding protein;protein_id=WP_025304902.1;transl_table=11 NZ_JPQY01000007.1 RefSeq gene 42624 43016 . + . ID=gene-IY40_RS05875;Name=panM;gbkey=Gene;gene=panM;gene_biotype=protein_coding;locus_tag=IY40_RS05875;old_locus_tag=IY40_05960 NZ_JPQY01000007.1 Protein Homology CDS 42624 43016 . + 0 ID=cds-WP_025304901.1;Parent=gene-IY40_RS05875;Dbxref=GenBank:WP_025304901.1;Name=WP_025304901.1;Ontology_term=GO:0015940,GO:0031638,GO:0008080;gbkey=CDS;gene=panM;go_function=N-acetyltransferase activity|0008080||IEA;go_process=pantothenate biosynthetic process|0015940||IEA,zymogen activation|0031638||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016929466.1;locus_tag=IY40_RS05875;product=aspartate 1-decarboxylase autocleavage activator PanM;protein_id=WP_025304901.1;transl_table=11 NZ_JPQY01000007.1 RefSeq gene 43013 44230 . + . ID=gene-IY40_RS05880;Name=IY40_RS05880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS05880;old_locus_tag=IY40_05965 NZ_JPQY01000007.1 Protein Homology CDS 43013 44230 . + 0 ID=cds-WP_043137533.1;Parent=gene-IY40_RS05880;Dbxref=GenBank:WP_043137533.1;Name=WP_043137533.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004934351.1;locus_tag=IY40_RS05880;product=DUF3142 domain-containing protein;protein_id=WP_043137533.1;transl_table=11 NZ_JPQY01000007.1 RefSeq gene 44274 46292 . + . ID=gene-IY40_RS05885;Name=IY40_RS05885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS05885;old_locus_tag=IY40_05970 NZ_JPQY01000007.1 Protein Homology CDS 44274 46292 . + 0 ID=cds-WP_376788169.1;Parent=gene-IY40_RS05885;Dbxref=GenBank:WP_376788169.1;Name=WP_376788169.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016929468.1;locus_tag=IY40_RS05885;product=hypothetical protein;protein_id=WP_376788169.1;transl_table=11 NZ_JPQY01000007.1 RefSeq gene 46357 47214 . - . ID=gene-IY40_RS05890;Name=rpoH;gbkey=Gene;gene=rpoH;gene_biotype=protein_coding;locus_tag=IY40_RS05890;old_locus_tag=IY40_05975 NZ_JPQY01000007.1 Protein Homology CDS 46357 47214 . - 0 ID=cds-WP_004934345.1;Parent=gene-IY40_RS05890;Dbxref=GenBank:WP_004934345.1;Name=WP_004934345.1;Ontology_term=GO:0006352,GO:0006355,GO:0003700,GO:0016987;gbkey=CDS;gene=rpoH;go_function=DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008458573.1;locus_tag=IY40_RS05890;product=RNA polymerase sigma factor RpoH;protein_id=WP_004934345.1;transl_table=11 NZ_JPQY01000007.1 RefSeq gene 47532 48485 . - . ID=gene-IY40_RS05895;Name=ftsX;gbkey=Gene;gene=ftsX;gene_biotype=protein_coding;locus_tag=IY40_RS05895;old_locus_tag=IY40_05980 NZ_JPQY01000007.1 Protein Homology CDS 47532 48485 . - 0 ID=cds-WP_025304898.1;Parent=gene-IY40_RS05895;Dbxref=GenBank:WP_025304898.1;Name=WP_025304898.1;Ontology_term=GO:0000910;gbkey=CDS;gene=ftsX;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211505.1;locus_tag=IY40_RS05895;product=permease-like cell division protein FtsX;protein_id=WP_025304898.1;transl_table=11 NZ_JPQY01000007.1 RefSeq gene 48475 49146 . - . ID=gene-IY40_RS05900;Name=ftsE;gbkey=Gene;gene=ftsE;gene_biotype=protein_coding;locus_tag=IY40_RS05900;old_locus_tag=IY40_05985 NZ_JPQY01000007.1 Protein Homology CDS 48475 49146 . - 0 ID=cds-WP_004934337.1;Parent=gene-IY40_RS05900;Dbxref=GenBank:WP_004934337.1;Name=WP_004934337.1;Ontology_term=GO:0000910,GO:0005524;gbkey=CDS;gene=ftsE;go_function=ATP binding|0005524||IEA;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019080173.1;locus_tag=IY40_RS05900;product=cell division ATP-binding protein FtsE;protein_id=WP_004934337.1;transl_table=11 NZ_JPQY01000007.1 RefSeq gene 49152 50348 . - . ID=gene-IY40_RS05905;Name=ftsY;end_range=50348,.;gbkey=Gene;gene=ftsY;gene_biotype=protein_coding;locus_tag=IY40_RS05905;old_locus_tag=IY40_05990;partial=true NZ_JPQY01000007.1 Protein Homology CDS 49152 50348 . - 0 ID=cds-WP_043137539.1;Parent=gene-IY40_RS05905;Dbxref=GenBank:WP_043137539.1;Name=WP_043137539.1;Ontology_term=GO:0006614,GO:0009306,GO:0003924,GO:0005047;end_range=50348,.;gbkey=CDS;gene=ftsY;go_function=GTPase activity|0003924||IEA,signal recognition particle binding|0005047||IEA;go_process=SRP-dependent cotranslational protein targeting to membrane|0006614||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004934334.1;locus_tag=IY40_RS05905;partial=true;product=signal recognition particle-docking protein FtsY;protein_id=WP_043137539.1;transl_table=11 ##sequence-region NZ_JPQY01000008.1 1 9199 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=615 NZ_JPQY01000008.1 RefSeq region 1 9199 . + . ID=NZ_JPQY01000008.1:1..9199;Dbxref=taxon:615;collected-by=Mahloro H. Serepa%3B Vincent M. Gray;collection-date=2013-04-11;country=South Africa: North West Province;gbkey=Src;genome=genomic;identified-by=Mahloro H. Serepa%3B Vincent M. Gray;isolation-source=entomopathogenic nematode Oscheius sp. MCB living in soil;mol_type=genomic DNA;nat-host=Oscheius sp. MCB;strain=MCB NZ_JPQY01000008.1 RefSeq pseudogene 1 446 . - . ID=gene-IY40_RS05910;Name=IY40_RS05910;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IY40_RS05910;old_locus_tag=IY40_05995;partial=true;pseudo=true;start_range=.,1 NZ_JPQY01000008.1 Protein Homology CDS 1 446 . - 0 ID=cds-IY40_RS05910;Parent=gene-IY40_RS05910;Note=frameshifted%3B incomplete%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012606398.1;locus_tag=IY40_RS05910;partial=true;product=DDE-type integrase/transposase/recombinase;pseudo=true;start_range=.,1;transl_table=11 NZ_JPQY01000008.1 RefSeq gene 980 2008 . + . ID=gene-IY40_RS05915;Name=IY40_RS05915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS05915;old_locus_tag=IY40_06000 NZ_JPQY01000008.1 Protein Homology CDS 980 2008 . + 0 ID=cds-WP_043137555.1;Parent=gene-IY40_RS05915;Dbxref=GenBank:WP_043137555.1;Name=WP_043137555.1;Ontology_term=GO:0008171;gbkey=CDS;go_function=O-methyltransferase activity|0008171||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013650144.1;locus_tag=IY40_RS05915;product=methyltransferase;protein_id=WP_043137555.1;transl_table=11 NZ_JPQY01000008.1 RefSeq gene 2119 2859 . + . ID=gene-IY40_RS05920;Name=IY40_RS05920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS05920;old_locus_tag=IY40_06005 NZ_JPQY01000008.1 Protein Homology CDS 2119 2859 . + 0 ID=cds-WP_043137558.1;Parent=gene-IY40_RS05920;Dbxref=GenBank:WP_043137558.1;Name=WP_043137558.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012146568.1;locus_tag=IY40_RS05920;product=SDR family oxidoreductase;protein_id=WP_043137558.1;transl_table=11 NZ_JPQY01000008.1 RefSeq gene 2886 4547 . + . ID=gene-IY40_RS05925;Name=IY40_RS05925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS05925;old_locus_tag=IY40_06010 NZ_JPQY01000008.1 Protein Homology CDS 2886 4547 . + 0 ID=cds-WP_043137562.1;Parent=gene-IY40_RS05925;Dbxref=GenBank:WP_043137562.1;Name=WP_043137562.1;Ontology_term=GO:0016831,GO:0030976,GO:0046872;gbkey=CDS;go_function=carboxy-lyase activity|0016831||IEA,thiamine pyrophosphate binding|0030976||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006708504.1;locus_tag=IY40_RS05925;product=alpha-keto acid decarboxylase family protein;protein_id=WP_043137562.1;transl_table=11 NZ_JPQY01000008.1 RefSeq pseudogene 4762 5466 . + . ID=gene-IY40_RS25720;Name=IY40_RS25720;end_range=5466,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IY40_RS25720;partial=true;pseudo=true NZ_JPQY01000008.1 Protein Homology CDS 4762 5466 . + 0 ID=cds-IY40_RS25720;Parent=gene-IY40_RS25720;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;end_range=5466,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001368704.1;locus_tag=IY40_RS25720;partial=true;product=ISL3 family transposase;pseudo=true;transl_table=11 NZ_JPQY01000008.1 RefSeq pseudogene 5571 5891 . - . ID=gene-IY40_RS25090;Name=IY40_RS25090;end_range=5891,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IY40_RS25090;partial=true;pseudo=true;start_range=.,5571 NZ_JPQY01000008.1 Protein Homology CDS 5571 5891 . - 0 ID=cds-IY40_RS25090;Parent=gene-IY40_RS25090;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=5891,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014834018.1;locus_tag=IY40_RS25090;partial=true;product=Tn3 family transposase;pseudo=true;start_range=.,5571;transl_table=11 NZ_JPQY01000008.1 RefSeq gene 7005 8140 . + . ID=gene-IY40_RS05935;Name=IY40_RS05935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS05935;old_locus_tag=IY40_06025 NZ_JPQY01000008.1 Protein Homology CDS 7005 7251 . + 0 ID=cds-WP_235211363.1;Parent=gene-IY40_RS05935;Dbxref=GenBank:WP_235211363.1;Name=WP_235211363.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611384.1;locus_tag=IY40_RS05935;product=IS3 family transposase;protein_id=WP_235211363.1;transl_table=11 NZ_JPQY01000008.1 Protein Homology CDS 7251 8140 . + 2 ID=cds-WP_235211363.1;Parent=gene-IY40_RS05935;Dbxref=GenBank:WP_235211363.1;Name=WP_235211363.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611384.1;locus_tag=IY40_RS05935;product=IS3 family transposase;protein_id=WP_235211363.1;transl_table=11 NZ_JPQY01000008.1 RefSeq gene 8220 9131 . + . ID=gene-IY40_RS05940;Name=IY40_RS05940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS05940;old_locus_tag=IY40_06030 NZ_JPQY01000008.1 Protein Homology CDS 8220 9131 . + 0 ID=cds-WP_080287117.1;Parent=gene-IY40_RS05940;Dbxref=GenBank:WP_080287117.1;Name=WP_080287117.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016377.6;locus_tag=IY40_RS05940;product=glycosyltransferase;protein_id=WP_080287117.1;transl_table=11 ##sequence-region NZ_JPQY01000009.1 1 193923 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=615 NZ_JPQY01000009.1 RefSeq region 1 193923 . + . ID=NZ_JPQY01000009.1:1..193923;Dbxref=taxon:615;collected-by=Mahloro H. Serepa%3B Vincent M. Gray;collection-date=2013-04-11;country=South Africa: North West Province;gbkey=Src;genome=genomic;identified-by=Mahloro H. Serepa%3B Vincent M. Gray;isolation-source=entomopathogenic nematode Oscheius sp. MCB living in soil;mol_type=genomic DNA;nat-host=Oscheius sp. MCB;strain=MCB NZ_JPQY01000009.1 RefSeq gene 289 669 . - . ID=gene-IY40_RS05945;Name=IY40_RS05945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS05945;old_locus_tag=IY40_06045 NZ_JPQY01000009.1 GeneMarkS-2+ CDS 289 669 . - 0 ID=cds-WP_043137580.1;Parent=gene-IY40_RS05945;Dbxref=GenBank:WP_043137580.1;Name=WP_043137580.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IY40_RS05945;product=hypothetical protein;protein_id=WP_043137580.1;transl_table=11 NZ_JPQY01000009.1 RefSeq gene 1051 2235 . + . ID=gene-IY40_RS05950;Name=rlmI;gbkey=Gene;gene=rlmI;gene_biotype=protein_coding;locus_tag=IY40_RS05950;old_locus_tag=IY40_06050 NZ_JPQY01000009.1 Protein Homology CDS 1051 2235 . + 0 ID=cds-WP_043137583.1;Parent=gene-IY40_RS05950;Dbxref=GenBank:WP_043137583.1;Name=WP_043137583.1;Ontology_term=GO:0003723,GO:0008649;gbkey=CDS;gene=rlmI;go_function=RNA binding|0003723||IEA,rRNA methyltransferase activity|0008649||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005170850.1;locus_tag=IY40_RS05950;product=23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI;protein_id=WP_043137583.1;transl_table=11 NZ_JPQY01000009.1 RefSeq gene 2296 2613 . + . ID=gene-IY40_RS05955;Name=hspQ;gbkey=Gene;gene=hspQ;gene_biotype=protein_coding;locus_tag=IY40_RS05955;old_locus_tag=IY40_06055 NZ_JPQY01000009.1 Protein Homology CDS 2296 2613 . + 0 ID=cds-WP_004928104.1;Parent=gene-IY40_RS05955;Dbxref=GenBank:WP_004928104.1;Name=WP_004928104.1;gbkey=CDS;gene=hspQ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226173.1;locus_tag=IY40_RS05955;product=heat shock protein HspQ;protein_id=WP_004928104.1;transl_table=11 NZ_JPQY01000009.1 RefSeq gene 2674 3087 . - . ID=gene-IY40_RS05960;Name=IY40_RS05960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS05960;old_locus_tag=IY40_06060 NZ_JPQY01000009.1 Protein Homology CDS 2674 3087 . - 0 ID=cds-WP_025302316.1;Parent=gene-IY40_RS05960;Dbxref=GenBank:WP_025302316.1;Name=WP_025302316.1;Ontology_term=GO:0120225;gbkey=CDS;go_function=coenzyme A binding|0120225||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012006189.1;locus_tag=IY40_RS05960;product=CoA-binding protein;protein_id=WP_025302316.1;transl_table=11 NZ_JPQY01000009.1 RefSeq gene 3344 4009 . + . ID=gene-IY40_RS05965;Name=IY40_RS05965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS05965;old_locus_tag=IY40_06065 NZ_JPQY01000009.1 Protein Homology CDS 3344 4009 . + 0 ID=cds-WP_025302315.1;Parent=gene-IY40_RS05965;Dbxref=GenBank:WP_025302315.1;Name=WP_025302315.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020453770.1;locus_tag=IY40_RS05965;product=DUF2057 family protein;protein_id=WP_025302315.1;transl_table=11 NZ_JPQY01000009.1 RefSeq gene 4133 4591 . + . ID=gene-IY40_RS05970;Name=IY40_RS05970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS05970;old_locus_tag=IY40_06070 NZ_JPQY01000009.1 Protein Homology CDS 4133 4591 . + 0 ID=cds-WP_043137591.1;Parent=gene-IY40_RS05970;Dbxref=GenBank:WP_043137591.1;Name=WP_043137591.1;Ontology_term=GO:0019242,GO:0008929;gbkey=CDS;go_function=methylglyoxal synthase activity|0008929||IEA;go_process=methylglyoxal biosynthetic process|0019242||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006320716.1;locus_tag=IY40_RS05970;product=methylglyoxal synthase;protein_id=WP_043137591.1;transl_table=11 NZ_JPQY01000009.1 RefSeq gene 4625 6679 . - . ID=gene-IY40_RS05975;Name=helD;gbkey=Gene;gene=helD;gene_biotype=protein_coding;locus_tag=IY40_RS05975;old_locus_tag=IY40_06075 NZ_JPQY01000009.1 Protein Homology CDS 4625 6679 . - 0 ID=cds-WP_043137594.1;Parent=gene-IY40_RS05975;Dbxref=GenBank:WP_043137594.1;Name=WP_043137594.1;Ontology_term=GO:0003677,GO:0003678,GO:0005524;gbkey=CDS;gene=helD;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005279909.1;locus_tag=IY40_RS05975;product=DNA helicase IV;protein_id=WP_043137594.1;transl_table=11 NZ_JPQY01000009.1 RefSeq gene 6846 7298 . + . ID=gene-IY40_RS05980;Name=IY40_RS05980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS05980;old_locus_tag=IY40_06080 NZ_JPQY01000009.1 Protein Homology CDS 6846 7298 . + 0 ID=cds-WP_043137597.1;Parent=gene-IY40_RS05980;Dbxref=GenBank:WP_043137597.1;Name=WP_043137597.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004873792.1;locus_tag=IY40_RS05980;product=YccF domain-containing protein;protein_id=WP_043137597.1;transl_table=11 NZ_JPQY01000009.1 RefSeq gene 7325 9460 . + . ID=gene-IY40_RS05985;Name=yccS;gbkey=Gene;gene=yccS;gene_biotype=protein_coding;locus_tag=IY40_RS05985;old_locus_tag=IY40_06085 NZ_JPQY01000009.1 Protein Homology CDS 7325 9460 . + 0 ID=cds-WP_043137600.1;Parent=gene-IY40_RS05985;Dbxref=GenBank:WP_043137600.1;Name=WP_043137600.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yccS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013812335.1;locus_tag=IY40_RS05985;product=YccS family putative transporter;protein_id=WP_043137600.1;transl_table=11 NZ_JPQY01000009.1 RefSeq gene 9465 10121 . - . ID=gene-IY40_RS05990;Name=IY40_RS05990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS05990;old_locus_tag=IY40_06090 NZ_JPQY01000009.1 Protein Homology CDS 9465 10121 . - 0 ID=cds-WP_025302311.1;Parent=gene-IY40_RS05990;Dbxref=GenBank:WP_025302311.1;Name=WP_025302311.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015377360.1;locus_tag=IY40_RS05990;product=TfoX/Sxy family DNA transformation protein;protein_id=WP_025302311.1;transl_table=11 NZ_JPQY01000009.1 RefSeq gene 10351 10857 . + . ID=gene-IY40_RS05995;Name=sulA;gbkey=Gene;gene=sulA;gene_biotype=protein_coding;locus_tag=IY40_RS05995;old_locus_tag=IY40_06095 NZ_JPQY01000009.1 Protein Homology CDS 10351 10857 . + 0 ID=cds-WP_025302310.1;Parent=gene-IY40_RS05995;Dbxref=GenBank:WP_025302310.1;Name=WP_025302310.1;Ontology_term=GO:0009432,GO:0051782,GO:0005515;gbkey=CDS;gene=sulA;go_function=protein binding|0005515||IEA;go_process=SOS response|0009432||IEA,negative regulation of cell division|0051782||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006324585.1;locus_tag=IY40_RS05995;product=SOS-induced cell division inhibitor SulA;protein_id=WP_025302310.1;transl_table=11 NZ_JPQY01000009.1 RefSeq gene 11214 12293 . + . ID=gene-IY40_RS06000;Name=ompA;gbkey=Gene;gene=ompA;gene_biotype=protein_coding;locus_tag=IY40_RS06000;old_locus_tag=IY40_06100 NZ_JPQY01000009.1 Protein Homology CDS 11214 12293 . + 0 ID=cds-WP_015377358.1;Parent=gene-IY40_RS06000;Dbxref=GenBank:WP_015377358.1;Name=WP_015377358.1;Ontology_term=GO:0015288;gbkey=CDS;gene=ompA;go_function=porin activity|0015288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017802501.1;locus_tag=IY40_RS06000;product=porin OmpA;protein_id=WP_015377358.1;transl_table=11 NZ_JPQY01000009.1 RefSeq gene 12399 12857 . - . ID=gene-IY40_RS06005;Name=matP;gbkey=Gene;gene=matP;gene_biotype=protein_coding;locus_tag=IY40_RS06005;old_locus_tag=IY40_06105 NZ_JPQY01000009.1 Protein Homology CDS 12399 12857 . - 0 ID=cds-WP_004928138.1;Parent=gene-IY40_RS06005;Dbxref=GenBank:WP_004928138.1;Name=WP_004928138.1;Ontology_term=GO:0006355,GO:0043565;gbkey=CDS;gene=matP;go_function=sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004928138.1;locus_tag=IY40_RS06005;product=macrodomain Ter protein MatP;protein_id=WP_004928138.1;transl_table=11 NZ_JPQY01000009.1 RefSeq gene 13068 14816 . + . ID=gene-IY40_RS06010;Name=IY40_RS06010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS06010;old_locus_tag=IY40_06110 NZ_JPQY01000009.1 Protein Homology CDS 13068 14816 . + 0 ID=cds-WP_043137603.1;Parent=gene-IY40_RS06010;Dbxref=GenBank:WP_043137603.1;Name=WP_043137603.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004928141.1;locus_tag=IY40_RS06010;product=AAA family ATPase;protein_id=WP_043137603.1;transl_table=11 NZ_JPQY01000009.1 RefSeq gene 14885 15403 . + . ID=gene-IY40_RS06015;Name=fabA;gbkey=Gene;gene=fabA;gene_biotype=protein_coding;locus_tag=IY40_RS06015;old_locus_tag=IY40_06115 NZ_JPQY01000009.1 Protein Homology CDS 14885 15403 . + 0 ID=cds-WP_004928144.1;Parent=gene-IY40_RS06015;Dbxref=GenBank:WP_004928144.1;Name=WP_004928144.1;Ontology_term=GO:0006633,GO:0019171;gbkey=CDS;gene=fabA;go_function=(3R)-hydroxyacyl-[acyl-carrier-protein] dehydratase activity|0019171||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013650072.1;locus_tag=IY40_RS06015;product=bifunctional 3-hydroxydecanoyl-ACP dehydratase/trans-2-decenoyl-ACP isomerase;protein_id=WP_004928144.1;transl_table=11 NZ_JPQY01000009.1 RefSeq gene 15793 16320 . + . ID=gene-IY40_RS06020;Name=IY40_RS06020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS06020;old_locus_tag=IY40_06120 NZ_JPQY01000009.1 Protein Homology CDS 15793 16320 . + 0 ID=cds-WP_025302308.1;Parent=gene-IY40_RS06020;Dbxref=GenBank:WP_025302308.1;Name=WP_025302308.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015377356.1;locus_tag=IY40_RS06020;product=winged helix-turn-helix transcriptional regulator;protein_id=WP_025302308.1;transl_table=11 NZ_JPQY01000009.1 RefSeq gene 16317 17594 . + . ID=gene-IY40_RS06025;Name=fabF;gbkey=Gene;gene=fabF;gene_biotype=protein_coding;locus_tag=IY40_RS06025;old_locus_tag=IY40_06125 NZ_JPQY01000009.1 Protein Homology CDS 16317 17594 . + 0 ID=cds-WP_043137608.1;Parent=gene-IY40_RS06025;Dbxref=GenBank:WP_043137608.1;Name=WP_043137608.1;Ontology_term=GO:0006633,GO:0004315;gbkey=CDS;gene=fabF;go_function=3-oxoacyl-[acyl-carrier-protein] synthase activity|0004315||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004928148.1;locus_tag=IY40_RS06025;product=beta-ketoacyl-ACP synthase II;protein_id=WP_043137608.1;transl_table=11 NZ_JPQY01000009.1 RefSeq gene 17659 17829 . - . ID=gene-IY40_RS25095;Name=rmf;gbkey=Gene;gene=rmf;gene_biotype=protein_coding;locus_tag=IY40_RS25095 NZ_JPQY01000009.1 Protein Homology CDS 17659 17829 . - 0 ID=cds-WP_004928150.1;Parent=gene-IY40_RS25095;Dbxref=GenBank:WP_004928150.1;Name=WP_004928150.1;Ontology_term=GO:0141014,GO:0043022;gbkey=CDS;gene=rmf;go_function=ribosome binding|0043022||IEA;go_process=ribosome hibernation|0141014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013574871.1;locus_tag=IY40_RS25095;product=ribosome modulation factor;protein_id=WP_004928150.1;transl_table=11 NZ_JPQY01000009.1 RefSeq gene 18100 18660 . - . ID=gene-IY40_RS06030;Name=pqiC;gbkey=Gene;gene=pqiC;gene_biotype=protein_coding;locus_tag=IY40_RS06030;old_locus_tag=IY40_06130 NZ_JPQY01000009.1 Protein Homology CDS 18100 18660 . - 0 ID=cds-WP_043137613.1;Parent=gene-IY40_RS06030;Dbxref=GenBank:WP_043137613.1;Name=WP_043137613.1;gbkey=CDS;gene=pqiC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019454510.1;locus_tag=IY40_RS06030;product=membrane integrity-associated transporter subunit PqiC;protein_id=WP_043137613.1;transl_table=11 NZ_JPQY01000009.1 RefSeq gene 18657 20303 . - . ID=gene-IY40_RS06035;Name=pqiB;gbkey=Gene;gene=pqiB;gene_biotype=protein_coding;locus_tag=IY40_RS06035;old_locus_tag=IY40_06135 NZ_JPQY01000009.1 Protein Homology CDS 18657 20303 . - 0 ID=cds-WP_025302305.1;Parent=gene-IY40_RS06035;Dbxref=GenBank:WP_025302305.1;Name=WP_025302305.1;gbkey=CDS;gene=pqiB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013650076.1;locus_tag=IY40_RS06035;product=intermembrane transport protein PqiB;protein_id=WP_025302305.1;transl_table=11 NZ_JPQY01000009.1 RefSeq gene 20290 21606 . - . ID=gene-IY40_RS06040;Name=pqiA;gbkey=Gene;gene=pqiA;gene_biotype=protein_coding;locus_tag=IY40_RS06040;old_locus_tag=IY40_06140 NZ_JPQY01000009.1 Protein Homology CDS 20290 21606 . - 0 ID=cds-WP_071826107.1;Parent=gene-IY40_RS06040;Dbxref=GenBank:WP_071826107.1;Name=WP_071826107.1;gbkey=CDS;gene=pqiA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013812325.1;locus_tag=IY40_RS06040;product=membrane integrity-associated transporter subunit PqiA;protein_id=WP_071826107.1;transl_table=11 NZ_JPQY01000009.1 RefSeq gene 21680 23584 . - . ID=gene-IY40_RS06045;Name=IY40_RS06045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS06045;old_locus_tag=IY40_06145 NZ_JPQY01000009.1 Protein Homology CDS 21680 23584 . - 0 ID=cds-WP_025302303.1;Parent=gene-IY40_RS06045;Dbxref=GenBank:WP_025302303.1;Name=WP_025302303.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211292.1;locus_tag=IY40_RS06045;product=ABC transporter ATP-binding protein;protein_id=WP_025302303.1;transl_table=11 NZ_JPQY01000009.1 RefSeq gene 23590 25716 . - . ID=gene-IY40_RS06050;Name=rlmKL;gbkey=Gene;gene=rlmKL;gene_biotype=protein_coding;locus_tag=IY40_RS06050;old_locus_tag=IY40_06150 NZ_JPQY01000009.1 Protein Homology CDS 23590 25716 . - 0 ID=cds-WP_025302302.1;Parent=gene-IY40_RS06050;Dbxref=GenBank:WP_025302302.1;Name=WP_025302302.1;Ontology_term=GO:0031167,GO:0003723,GO:0008990;gbkey=CDS;gene=rlmKL;go_function=RNA binding|0003723||IEA,rRNA (guanine-N2-)-methyltransferase activity|0008990||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211293.1;locus_tag=IY40_RS06050;product=bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL;protein_id=WP_025302302.1;transl_table=11 NZ_JPQY01000009.1 RefSeq gene 25820 26923 . + . ID=gene-IY40_RS06055;Name=IY40_RS06055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS06055;old_locus_tag=IY40_06155 NZ_JPQY01000009.1 Protein Homology CDS 25820 26923 . + 0 ID=cds-WP_016928298.1;Parent=gene-IY40_RS06055;Dbxref=GenBank:WP_016928298.1;Name=WP_016928298.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015377349.1;locus_tag=IY40_RS06055;product=YcbX family protein;protein_id=WP_016928298.1;transl_table=11 NZ_JPQY01000009.1 RefSeq gene 26930 27478 . - . ID=gene-IY40_RS06060;Name=IY40_RS06060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS06060;old_locus_tag=IY40_06160 NZ_JPQY01000009.1 Protein Homology CDS 26930 27478 . - 0 ID=cds-WP_004928171.1;Parent=gene-IY40_RS06060;Dbxref=GenBank:WP_004928171.1;Name=WP_004928171.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211295.1;locus_tag=IY40_RS06060;product=cell division protein ZapC;protein_id=WP_004928171.1;transl_table=11 NZ_JPQY01000009.1 RefSeq gene 27655 28665 . - . ID=gene-IY40_RS06065;Name=pyrD;gbkey=Gene;gene=pyrD;gene_biotype=protein_coding;locus_tag=IY40_RS06065;old_locus_tag=IY40_06165 NZ_JPQY01000009.1 Protein Homology CDS 27655 28665 . - 0 ID=cds-WP_019454516.1;Parent=gene-IY40_RS06065;Dbxref=GenBank:WP_019454516.1;Name=WP_019454516.1;Ontology_term=GO:0006222,GO:0004152,GO:0016020;gbkey=CDS;gene=pyrD;go_component=membrane|0016020||IEA;go_function=dihydroorotate dehydrogenase activity|0004152||IEA;go_process=UMP biosynthetic process|0006222||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015840036.1;locus_tag=IY40_RS06065;product=quinone-dependent dihydroorotate dehydrogenase;protein_id=WP_019454516.1;transl_table=11 NZ_JPQY01000009.1 RefSeq gene 28924 29502 . + . ID=gene-IY40_RS06070;Name=ssuE;gbkey=Gene;gene=ssuE;gene_biotype=protein_coding;locus_tag=IY40_RS06070;old_locus_tag=IY40_06170 NZ_JPQY01000009.1 Protein Homology CDS 28924 29502 . + 0 ID=cds-WP_043137622.1;Parent=gene-IY40_RS06070;Dbxref=GenBank:WP_043137622.1;Name=WP_043137622.1;Ontology_term=GO:0046306,GO:0008752;gbkey=CDS;gene=ssuE;go_function=FMN reductase [NAD(P)H] activity|0008752||IEA;go_process=alkanesulfonate catabolic process|0046306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016928300.1;locus_tag=IY40_RS06070;product=NADPH-dependent FMN reductase;protein_id=WP_043137622.1;transl_table=11 NZ_JPQY01000009.1 RefSeq gene 29527 30492 . + . ID=gene-IY40_RS06075;Name=IY40_RS06075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS06075;old_locus_tag=IY40_06175 NZ_JPQY01000009.1 Protein Homology CDS 29527 30492 . + 0 ID=cds-WP_043137626.1;Parent=gene-IY40_RS06075;Dbxref=GenBank:WP_043137626.1;Name=WP_043137626.1;Ontology_term=GO:0042626,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004928180.1;locus_tag=IY40_RS06075;product=sulfonate ABC transporter substrate-binding protein;protein_id=WP_043137626.1;transl_table=11 NZ_JPQY01000009.1 RefSeq gene 30512 31660 . + . ID=gene-IY40_RS06080;Name=ssuD;gbkey=Gene;gene=ssuD;gene_biotype=protein_coding;locus_tag=IY40_RS06080;old_locus_tag=IY40_06180 NZ_JPQY01000009.1 Protein Homology CDS 30512 31660 . + 0 ID=cds-WP_043137629.1;Parent=gene-IY40_RS06080;Dbxref=GenBank:WP_043137629.1;Name=WP_043137629.1;Ontology_term=GO:0006790,GO:0008726,GO:0010181;gbkey=CDS;gene=ssuD;go_function=alkanesulfonate monooxygenase activity|0008726||IEA,FMN binding|0010181||IEA;go_process=sulfur compound metabolic process|0006790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016588500.1;locus_tag=IY40_RS06080;product=FMNH2-dependent alkanesulfonate monooxygenase;protein_id=WP_043137629.1;transl_table=11 NZ_JPQY01000009.1 RefSeq gene 31672 32466 . + . ID=gene-IY40_RS06085;Name=ssuC;gbkey=Gene;gene=ssuC;gene_biotype=protein_coding;locus_tag=IY40_RS06085;old_locus_tag=IY40_06185 NZ_JPQY01000009.1 Protein Homology CDS 31672 32466 . + 0 ID=cds-WP_043137634.1;Parent=gene-IY40_RS06085;Dbxref=GenBank:WP_043137634.1;Name=WP_043137634.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=ssuC;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004928187.1;locus_tag=IY40_RS06085;product=aliphatic sulfonate ABC transporter permease SsuC;protein_id=WP_043137634.1;transl_table=11 NZ_JPQY01000009.1 RefSeq gene 32463 33236 . + . ID=gene-IY40_RS06090;Name=ssuB;gbkey=Gene;gene=ssuB;gene_biotype=protein_coding;locus_tag=IY40_RS06090;old_locus_tag=IY40_06190 NZ_JPQY01000009.1 Protein Homology CDS 32463 33236 . + 0 ID=cds-WP_025302296.1;Parent=gene-IY40_RS06090;Dbxref=GenBank:WP_025302296.1;Name=WP_025302296.1;Ontology_term=GO:0005524;gbkey=CDS;gene=ssuB;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004942726.1;locus_tag=IY40_RS06090;product=aliphatic sulfonates ABC transporter ATP-binding protein;protein_id=WP_025302296.1;transl_table=11 NZ_JPQY01000009.1 RefSeq gene 33289 35907 . - . ID=gene-IY40_RS06095;Name=pepN;gbkey=Gene;gene=pepN;gene_biotype=protein_coding;locus_tag=IY40_RS06095;old_locus_tag=IY40_06195 NZ_JPQY01000009.1 Protein Homology CDS 33289 35907 . - 0 ID=cds-WP_025302295.1;Parent=gene-IY40_RS06095;Dbxref=GenBank:WP_025302295.1;Name=WP_025302295.1;Ontology_term=GO:0006508,GO:0004177,GO:0008237,GO:0008270;gbkey=CDS;gene=pepN;go_function=aminopeptidase activity|0004177||IEA,metallopeptidase activity|0008237||IEA,zinc ion binding|0008270||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002220013.1;locus_tag=IY40_RS06095;product=aminopeptidase N;protein_id=WP_025302295.1;transl_table=11 NZ_JPQY01000009.1 RefSeq gene 36245 37945 . + . ID=gene-IY40_RS06100;Name=IY40_RS06100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS06100;old_locus_tag=IY40_06200 NZ_JPQY01000009.1 Protein Homology CDS 36245 37945 . + 0 ID=cds-WP_025302294.1;Parent=gene-IY40_RS06100;Dbxref=GenBank:WP_025302294.1;Name=WP_025302294.1;Ontology_term=GO:0005525,GO:0046872,GO:0052621,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=GTP binding|0005525||IEA,metal ion binding|0046872||IEA,diguanylate cyclase activity|0052621||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013812314.1;locus_tag=IY40_RS06100;product=GGDEF domain-containing protein;protein_id=WP_025302294.1;transl_table=11 NZ_JPQY01000009.1 RefSeq gene 38201 39406 . + . ID=gene-IY40_RS06105;Name=pncB;gbkey=Gene;gene=pncB;gene_biotype=protein_coding;locus_tag=IY40_RS06105;old_locus_tag=IY40_06205 NZ_JPQY01000009.1 Protein Homology CDS 38201 39406 . + 0 ID=cds-WP_043137639.1;Parent=gene-IY40_RS06105;Dbxref=GenBank:WP_043137639.1;Name=WP_043137639.1;Ontology_term=GO:0009435,GO:0004516;gbkey=CDS;gene=pncB;go_function=nicotinate phosphoribosyltransferase activity|0004516||IEA;go_process=NAD+ biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011816044.1;locus_tag=IY40_RS06105;product=nicotinate phosphoribosyltransferase;protein_id=WP_043137639.1;transl_table=11 NZ_JPQY01000009.1 RefSeq gene 39620 41020 . + . ID=gene-IY40_RS06110;Name=asnS;gbkey=Gene;gene=asnS;gene_biotype=protein_coding;locus_tag=IY40_RS06110;old_locus_tag=IY40_06210 NZ_JPQY01000009.1 Protein Homology CDS 39620 41020 . + 0 ID=cds-WP_004928205.1;Parent=gene-IY40_RS06110;Dbxref=GenBank:WP_004928205.1;Name=WP_004928205.1;Ontology_term=GO:0006421,GO:0004816,GO:0005524;gbkey=CDS;gene=asnS;go_function=asparagine-tRNA ligase activity|0004816||IEA,ATP binding|0005524||IEA;go_process=asparaginyl-tRNA aminoacylation|0006421||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123540.1;locus_tag=IY40_RS06110;product=asparagine--tRNA ligase;protein_id=WP_004928205.1;transl_table=11 NZ_JPQY01000009.1 RefSeq gene 41322 42449 . + . ID=gene-IY40_RS06115;Name=ompC;gbkey=Gene;gene=ompC;gene_biotype=protein_coding;locus_tag=IY40_RS06115;old_locus_tag=IY40_06215 NZ_JPQY01000009.1 Protein Homology CDS 41322 42449 . + 0 ID=cds-WP_043137642.1;Parent=gene-IY40_RS06115;Dbxref=GenBank:WP_043137642.1;Name=WP_043137642.1;Ontology_term=GO:0034220,GO:0015288;gbkey=CDS;gene=ompC;go_function=porin activity|0015288||IEA;go_process=monoatomic ion transmembrane transport|0034220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017892288.1;locus_tag=IY40_RS06115;product=porin OmpC;protein_id=WP_043137642.1;transl_table=11 NZ_JPQY01000009.1 RefSeq gene 42694 43884 . + . ID=gene-IY40_RS06120;Name=IY40_RS06120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS06120;old_locus_tag=IY40_06220 NZ_JPQY01000009.1 Protein Homology CDS 42694 43884 . + 0 ID=cds-WP_043137645.1;Parent=gene-IY40_RS06120;Dbxref=GenBank:WP_043137645.1;Name=WP_043137645.1;Ontology_term=GO:0008483,GO:0030170;gbkey=CDS;go_function=transaminase activity|0008483||IEA,pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009653304.1;locus_tag=IY40_RS06120;product=amino acid aminotransferase;protein_id=WP_043137645.1;transl_table=11 NZ_JPQY01000009.1 RefSeq gene 43961 44608 . - . ID=gene-IY40_RS06125;Name=IY40_RS06125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS06125;old_locus_tag=IY40_06225 NZ_JPQY01000009.1 Protein Homology CDS 43961 44608 . - 0 ID=cds-WP_025302290.1;Parent=gene-IY40_RS06125;Dbxref=GenBank:WP_025302290.1;Name=WP_025302290.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211304.1;locus_tag=IY40_RS06125;product=MBL fold metallo-hydrolase;protein_id=WP_025302290.1;transl_table=11 NZ_JPQY01000009.1 RefSeq gene 44673 45221 . - . ID=gene-IY40_RS06130;Name=IY40_RS06130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS06130;old_locus_tag=IY40_06230 NZ_JPQY01000009.1 Protein Homology CDS 44673 45221 . - 0 ID=cds-WP_043137647.1;Parent=gene-IY40_RS06130;Dbxref=GenBank:WP_043137647.1;Name=WP_043137647.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012006154.1;locus_tag=IY40_RS06130;product=YcbK family protein;protein_id=WP_043137647.1;transl_table=11 NZ_JPQY01000009.1 RefSeq gene 45402 47210 . - . ID=gene-IY40_RS06135;Name=ldtD;gbkey=Gene;gene=ldtD;gene_biotype=protein_coding;locus_tag=IY40_RS06135;old_locus_tag=IY40_06235 NZ_JPQY01000009.1 Protein Homology CDS 45402 47210 . - 0 ID=cds-WP_072008234.1;Parent=gene-IY40_RS06135;Dbxref=GenBank:WP_072008234.1;Name=WP_072008234.1;Ontology_term=GO:0016740;gbkey=CDS;gene=ldtD;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015377336.1;locus_tag=IY40_RS06135;product=L%2CD-transpeptidase;protein_id=WP_072008234.1;transl_table=11 NZ_JPQY01000009.1 RefSeq gene 47431 51879 . - . ID=gene-IY40_RS06140;Name=mukB;gbkey=Gene;gene=mukB;gene_biotype=protein_coding;locus_tag=IY40_RS06140;old_locus_tag=IY40_06240 NZ_JPQY01000009.1 Protein Homology CDS 47431 51879 . - 0 ID=cds-WP_043137650.1;Parent=gene-IY40_RS06140;Dbxref=GenBank:WP_043137650.1;Name=WP_043137650.1;Ontology_term=GO:0007059,GO:0030261,GO:0003677;gbkey=CDS;gene=mukB;go_function=DNA binding|0003677||IEA;go_process=chromosome segregation|0007059||IEA,chromosome condensation|0030261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016586397.1;locus_tag=IY40_RS06140;product=chromosome partition protein MukB;protein_id=WP_043137650.1;transl_table=11 NZ_JPQY01000009.1 RefSeq gene 51876 52604 . - . ID=gene-IY40_RS06145;Name=mukE;gbkey=Gene;gene=mukE;gene_biotype=protein_coding;locus_tag=IY40_RS06145;old_locus_tag=IY40_06245 NZ_JPQY01000009.1 Protein Homology CDS 51876 52604 . - 0 ID=cds-WP_004928226.1;Parent=gene-IY40_RS06145;Dbxref=GenBank:WP_004928226.1;Name=WP_004928226.1;Ontology_term=GO:0007059,GO:0030261;gbkey=CDS;gene=mukE;go_process=chromosome segregation|0007059||IEA,chromosome condensation|0030261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020438800.1;locus_tag=IY40_RS06145;product=chromosome partition protein MukE;protein_id=WP_004928226.1;transl_table=11 NZ_JPQY01000009.1 RefSeq gene 52585 53907 . - . ID=gene-IY40_RS06150;Name=mukF;gbkey=Gene;gene=mukF;gene_biotype=protein_coding;locus_tag=IY40_RS06150;old_locus_tag=IY40_06250 NZ_JPQY01000009.1 Protein Homology CDS 52585 53907 . - 0 ID=cds-WP_004928228.1;Parent=gene-IY40_RS06150;Dbxref=GenBank:WP_004928228.1;Name=WP_004928228.1;Ontology_term=GO:0007059,GO:0005509;gbkey=CDS;gene=mukF;go_function=calcium ion binding|0005509||IEA;go_process=chromosome segregation|0007059||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123549.1;locus_tag=IY40_RS06150;product=chromosome partition protein MukF;protein_id=WP_004928228.1;transl_table=11 NZ_JPQY01000009.1 RefSeq gene 53904 54689 . - . ID=gene-IY40_RS06155;Name=cmoM;gbkey=Gene;gene=cmoM;gene_biotype=protein_coding;locus_tag=IY40_RS06155;old_locus_tag=IY40_06255 NZ_JPQY01000009.1 Protein Homology CDS 53904 54689 . - 0 ID=cds-WP_025302286.1;Parent=gene-IY40_RS06155;Dbxref=GenBank:WP_025302286.1;Name=WP_025302286.1;gbkey=CDS;gene=cmoM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019079869.1;locus_tag=IY40_RS06155;product=tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM;protein_id=WP_025302286.1;transl_table=11 NZ_JPQY01000009.1 RefSeq gene 54841 55614 . + . ID=gene-IY40_RS06160;Name=elyC;gbkey=Gene;gene=elyC;gene_biotype=protein_coding;locus_tag=IY40_RS06160;old_locus_tag=IY40_06260 NZ_JPQY01000009.1 Protein Homology CDS 54841 55614 . + 0 ID=cds-WP_025302285.1;Parent=gene-IY40_RS06160;Dbxref=GenBank:WP_025302285.1;Name=WP_025302285.1;gbkey=CDS;gene=elyC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004928232.1;locus_tag=IY40_RS06160;product=envelope biogenesis factor ElyC;protein_id=WP_025302285.1;transl_table=11 NZ_JPQY01000009.1 RefSeq gene 55622 56518 . - . ID=gene-IY40_RS06165;Name=IY40_RS06165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS06165;old_locus_tag=IY40_06265 NZ_JPQY01000009.1 Protein Homology CDS 55622 56518 . - 0 ID=cds-WP_025302284.1;Parent=gene-IY40_RS06165;Dbxref=GenBank:WP_025302284.1;Name=WP_025302284.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004942685.1;locus_tag=IY40_RS06165;product=YcbJ family phosphotransferase;protein_id=WP_025302284.1;transl_table=11 NZ_JPQY01000009.1 RefSeq gene 56668 57417 . - . ID=gene-IY40_RS06170;Name=kdsB;gbkey=Gene;gene=kdsB;gene_biotype=protein_coding;locus_tag=IY40_RS06170;old_locus_tag=IY40_06270 NZ_JPQY01000009.1 Protein Homology CDS 56668 57417 . - 0 ID=cds-WP_043137652.1;Parent=gene-IY40_RS06170;Dbxref=GenBank:WP_043137652.1;Name=WP_043137652.1;Ontology_term=GO:0009244,GO:0008690;gbkey=CDS;gene=kdsB;go_function=3-deoxy-manno-octulosonate cytidylyltransferase activity|0008690||IEA;go_process=lipopolysaccharide core region biosynthetic process|0009244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004928235.1;locus_tag=IY40_RS06170;product=3-deoxy-manno-octulosonate cytidylyltransferase;protein_id=WP_043137652.1;transl_table=11 NZ_JPQY01000009.1 RefSeq gene 57414 57596 . - . ID=gene-IY40_RS06175;Name=IY40_RS06175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS06175;old_locus_tag=IY40_06275 NZ_JPQY01000009.1 Protein Homology CDS 57414 57596 . - 0 ID=cds-WP_004928237.1;Parent=gene-IY40_RS06175;Dbxref=GenBank:WP_004928237.1;Name=WP_004928237.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004717378.1;locus_tag=IY40_RS06175;product=Trm112 family protein;protein_id=WP_004928237.1;transl_table=11 NZ_JPQY01000009.1 RefSeq gene 57894 59120 . - . ID=gene-IY40_RS06180;Name=IY40_RS06180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS06180;old_locus_tag=IY40_06280 NZ_JPQY01000009.1 Protein Homology CDS 57894 59120 . - 0 ID=cds-WP_043137654.1;Parent=gene-IY40_RS06180;Dbxref=GenBank:WP_043137654.1;Name=WP_043137654.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016928314.1;locus_tag=IY40_RS06180;product=winged helix-turn-helix domain-containing protein;protein_id=WP_043137654.1;transl_table=11 NZ_JPQY01000009.1 RefSeq gene 59234 59455 . - . ID=gene-IY40_RS06185;Name=IY40_RS06185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS06185;old_locus_tag=IY40_06285 NZ_JPQY01000009.1 Protein Homology CDS 59234 59455 . - 0 ID=cds-WP_004928241.1;Parent=gene-IY40_RS06185;Dbxref=GenBank:WP_004928241.1;Name=WP_004928241.1;Ontology_term=GO:0003676;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015671766.1;locus_tag=IY40_RS06185;product=cold-shock protein;protein_id=WP_004928241.1;transl_table=11 NZ_JPQY01000009.1 RefSeq gene 59678 59887 . - . ID=gene-IY40_RS06190;Name=cspE;gbkey=Gene;gene=cspE;gene_biotype=protein_coding;gene_synonym=gicA,msmC;locus_tag=IY40_RS06190;old_locus_tag=IY40_06290 NZ_JPQY01000009.1 Protein Homology CDS 59678 59887 . - 0 ID=cds-WP_004928244.1;Parent=gene-IY40_RS06190;Dbxref=GenBank:WP_004928244.1;Name=WP_004928244.1;Ontology_term=GO:0031564,GO:0001072,GO:0003697,GO:0003723;gbkey=CDS;gene=cspE;go_function=transcription antitermination factor activity%2C RNA binding|0001072||IEA,single-stranded DNA binding|0003697||IEA,RNA binding|0003723||IEA;go_process=transcription antitermination|0031564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004717375.1;locus_tag=IY40_RS06190;product=transcription antiterminator/RNA stability regulator CspE;protein_id=WP_004928244.1;transl_table=11 NZ_JPQY01000009.1 RefSeq gene 60413 61819 . + . ID=gene-IY40_RS06195;Name=hglS;gbkey=Gene;gene=hglS;gene_biotype=protein_coding;gene_synonym=ydcJ;locus_tag=IY40_RS06195;old_locus_tag=IY40_06295 NZ_JPQY01000009.1 Protein Homology CDS 60413 61819 . + 0 ID=cds-WP_025302281.1;Parent=gene-IY40_RS06195;Dbxref=GenBank:WP_025302281.1;Name=WP_025302281.1;Ontology_term=GO:0051213;gbkey=CDS;gene=hglS;go_function=dioxygenase activity|0051213||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004928247.1;locus_tag=IY40_RS06195;product=2-oxoadipate dioxygenase/decarboxylase HglS;protein_id=WP_025302281.1;transl_table=11 NZ_JPQY01000009.1 RefSeq gene 61822 62802 . - . ID=gene-IY40_RS06200;Name=lpxK;gbkey=Gene;gene=lpxK;gene_biotype=protein_coding;locus_tag=IY40_RS06200;old_locus_tag=IY40_06300 NZ_JPQY01000009.1 Protein Homology CDS 61822 62802 . - 0 ID=cds-WP_043137664.1;Parent=gene-IY40_RS06200;Dbxref=GenBank:WP_043137664.1;Name=WP_043137664.1;Ontology_term=GO:0009245,GO:0009029;gbkey=CDS;gene=lpxK;go_function=lipid-A 4'-kinase activity|0009029||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013812298.1;locus_tag=IY40_RS06200;product=tetraacyldisaccharide 4'-kinase;protein_id=WP_043137664.1;transl_table=11 NZ_JPQY01000009.1 RefSeq gene 62802 64550 . - . ID=gene-IY40_RS06205;Name=msbA;gbkey=Gene;gene=msbA;gene_biotype=protein_coding;locus_tag=IY40_RS06205;old_locus_tag=IY40_06305 NZ_JPQY01000009.1 Protein Homology CDS 62802 64550 . - 0 ID=cds-WP_025302279.1;Parent=gene-IY40_RS06205;Dbxref=GenBank:WP_025302279.1;Name=WP_025302279.1;Ontology_term=GO:0055085,GO:0005524,GO:0034040,GO:0140359,GO:0016020;gbkey=CDS;gene=msbA;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled lipid transmembrane transporter activity|0034040||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309024.1;locus_tag=IY40_RS06205;product=lipid A ABC transporter ATP-binding protein/permease MsbA;protein_id=WP_025302279.1;transl_table=11 NZ_JPQY01000009.1 RefSeq gene 64586 66850 . - . ID=gene-IY40_RS06210;Name=IY40_RS06210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS06210;old_locus_tag=IY40_06310 NZ_JPQY01000009.1 Protein Homology CDS 64586 66850 . - 0 ID=cds-WP_050505129.1;Parent=gene-IY40_RS06210;Dbxref=GenBank:WP_050505129.1;Name=WP_050505129.1;Ontology_term=GO:0030420,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=establishment of competence for transformation|0030420||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015671761.1;locus_tag=IY40_RS06210;product=ComEC family protein;protein_id=WP_050505129.1;transl_table=11 NZ_JPQY01000009.1 RefSeq gene 67133 67417 . - . ID=gene-IY40_RS06215;Name=ihfB;gbkey=Gene;gene=ihfB;gene_biotype=protein_coding;locus_tag=IY40_RS06215;old_locus_tag=IY40_06315 NZ_JPQY01000009.1 Protein Homology CDS 67133 67417 . - 0 ID=cds-WP_004928264.1;Parent=gene-IY40_RS06215;Dbxref=GenBank:WP_004928264.1;Name=WP_004928264.1;Ontology_term=GO:0006310,GO:0006355,GO:0006417,GO:0075713,GO:0003677,GO:0005694;gbkey=CDS;gene=ihfB;go_component=chromosome|0005694||IEA;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,regulation of DNA-templated transcription|0006355||IEA,regulation of translation|0006417||IEA,establishment of integrated proviral latency|0075713||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459957.1;locus_tag=IY40_RS06215;product=integration host factor subunit beta;protein_id=WP_004928264.1;transl_table=11 NZ_JPQY01000009.1 RefSeq gene 67480 69153 . - . ID=gene-IY40_RS06220;Name=rpsA;gbkey=Gene;gene=rpsA;gene_biotype=protein_coding;locus_tag=IY40_RS06220;old_locus_tag=IY40_06320 NZ_JPQY01000009.1 Protein Homology CDS 67480 69153 . - 0 ID=cds-WP_004928267.1;Parent=gene-IY40_RS06220;Dbxref=GenBank:WP_004928267.1;Name=WP_004928267.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsA;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226118.1;locus_tag=IY40_RS06220;product=30S ribosomal protein S1;protein_id=WP_004928267.1;transl_table=11 NZ_JPQY01000009.1 RefSeq gene 69338 70027 . - . ID=gene-IY40_RS06225;Name=cmk;gbkey=Gene;gene=cmk;gene_biotype=protein_coding;locus_tag=IY40_RS06225;old_locus_tag=IY40_06325 NZ_JPQY01000009.1 Protein Homology CDS 69338 70027 . - 0 ID=cds-WP_028127992.1;Parent=gene-IY40_RS06225;Dbxref=GenBank:WP_028127992.1;Name=WP_028127992.1;Ontology_term=GO:0015949,GO:0005524,GO:0036431;gbkey=CDS;gene=cmk;go_function=ATP binding|0005524||IEA,dCMP kinase activity|0036431||IEA;go_process=nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006708437.1;locus_tag=IY40_RS06225;product=(d)CMP kinase;protein_id=WP_028127992.1;transl_table=11 NZ_JPQY01000009.1 RefSeq gene 70290 71576 . - . ID=gene-IY40_RS06230;Name=aroA;gbkey=Gene;gene=aroA;gene_biotype=protein_coding;locus_tag=IY40_RS06230;old_locus_tag=IY40_06330 NZ_JPQY01000009.1 Protein Homology CDS 70290 71576 . - 0 ID=cds-WP_043137680.1;Parent=gene-IY40_RS06230;Dbxref=GenBank:WP_043137680.1;Name=WP_043137680.1;Ontology_term=GO:0009073,GO:0003866;gbkey=CDS;gene=aroA;go_function=3-phosphoshikimate 1-carboxyvinyltransferase activity|0003866||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013812294.1;locus_tag=IY40_RS06230;product=3-phosphoshikimate 1-carboxyvinyltransferase;protein_id=WP_043137680.1;transl_table=11 NZ_JPQY01000009.1 RefSeq gene 71691 72776 . - . ID=gene-IY40_RS06235;Name=serC;gbkey=Gene;gene=serC;gene_biotype=protein_coding;locus_tag=IY40_RS06235;old_locus_tag=IY40_06335 NZ_JPQY01000009.1 Protein Homology CDS 71691 72776 . - 0 ID=cds-WP_043137684.1;Parent=gene-IY40_RS06235;Dbxref=GenBank:WP_043137684.1;Name=WP_043137684.1;Ontology_term=GO:0006564,GO:0003824,GO:0004648;gbkey=CDS;gene=serC;go_function=catalytic activity|0003824||IEA,O-phospho-L-serine:2-oxoglutarate aminotransferase activity|0004648||IEA;go_process=L-serine biosynthetic process|0006564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004710028.1;locus_tag=IY40_RS06235;product=3-phosphoserine/phosphohydroxythreonine transaminase;protein_id=WP_043137684.1;transl_table=11 NZ_JPQY01000009.1 RefSeq gene 73079 74125 . - . ID=gene-IY40_RS06240;Name=ansB;gbkey=Gene;gene=ansB;gene_biotype=protein_coding;locus_tag=IY40_RS06240;old_locus_tag=IY40_06345 NZ_JPQY01000009.1 Protein Homology CDS 73079 74125 . - 0 ID=cds-WP_043137688.1;Parent=gene-IY40_RS06240;Dbxref=GenBank:WP_043137688.1;Name=WP_043137688.1;Ontology_term=GO:0006528,GO:0004067;gbkey=CDS;gene=ansB;go_function=asparaginase activity|0004067||IEA;go_process=asparagine metabolic process|0006528||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012006135.1;locus_tag=IY40_RS06240;product=L-asparaginase 2;protein_id=WP_043137688.1;transl_table=11 NZ_JPQY01000009.1 RefSeq gene 74274 76037 . + . ID=gene-IY40_RS06245;Name=ycaO;gbkey=Gene;gene=ycaO;gene_biotype=protein_coding;locus_tag=IY40_RS06245;old_locus_tag=IY40_06350 NZ_JPQY01000009.1 Protein Homology CDS 74274 76037 . + 0 ID=cds-WP_043137692.1;Parent=gene-IY40_RS06245;Dbxref=GenBank:WP_043137692.1;Name=WP_043137692.1;gbkey=CDS;gene=ycaO;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006320822.1;locus_tag=IY40_RS06245;product=30S ribosomal protein S12 methylthiotransferase accessory factor YcaO;protein_id=WP_043137692.1;transl_table=11 NZ_JPQY01000009.1 RefSeq gene 76499 77359 . + . ID=gene-IY40_RS06250;Name=focA;gbkey=Gene;gene=focA;gene_biotype=protein_coding;locus_tag=IY40_RS06250;old_locus_tag=IY40_06355 NZ_JPQY01000009.1 Protein Homology CDS 76499 77359 . + 0 ID=cds-WP_019454548.1;Parent=gene-IY40_RS06250;Dbxref=GenBank:WP_019454548.1;Name=WP_019454548.1;gbkey=CDS;gene=focA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012006133.1;locus_tag=IY40_RS06250;product=formate transporter FocA;protein_id=WP_019454548.1;transl_table=11 NZ_JPQY01000009.1 RefSeq gene 77414 79696 . + . ID=gene-IY40_RS06255;Name=pflB;gbkey=Gene;gene=pflB;gene_biotype=protein_coding;locus_tag=IY40_RS06255;old_locus_tag=IY40_06360 NZ_JPQY01000009.1 Protein Homology CDS 77414 79696 . + 0 ID=cds-WP_004928286.1;Parent=gene-IY40_RS06255;Dbxref=GenBank:WP_004928286.1;Name=WP_004928286.1;Ontology_term=GO:0005975,GO:0008861,GO:0005737;gbkey=CDS;gene=pflB;go_component=cytoplasm|0005737||IEA;go_function=formate C-acetyltransferase activity|0008861||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415423.1;locus_tag=IY40_RS06255;product=formate C-acetyltransferase;protein_id=WP_004928286.1;transl_table=11 NZ_JPQY01000009.1 RefSeq gene 79977 80717 . + . ID=gene-IY40_RS06260;Name=pflA;gbkey=Gene;gene=pflA;gene_biotype=protein_coding;locus_tag=IY40_RS06260;old_locus_tag=IY40_06365 NZ_JPQY01000009.1 Protein Homology CDS 79977 80717 . + 0 ID=cds-WP_016928325.1;Parent=gene-IY40_RS06260;Dbxref=GenBank:WP_016928325.1;Name=WP_016928325.1;Ontology_term=GO:0043365,GO:0051539;gbkey=CDS;gene=pflA;go_function=[formate-C-acetyltransferase]-activating enzyme activity|0043365||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226110.1;locus_tag=IY40_RS06260;product=pyruvate formate lyase 1-activating protein;protein_id=WP_016928325.1;transl_table=11 NZ_JPQY01000009.1 RefSeq gene 80767 81918 . - . ID=gene-IY40_RS06265;Name=IY40_RS06265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS06265;old_locus_tag=IY40_06370 NZ_JPQY01000009.1 Protein Homology CDS 80767 81918 . - 0 ID=cds-WP_033637849.1;Parent=gene-IY40_RS06265;Dbxref=GenBank:WP_033637849.1;Name=WP_033637849.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211335.1;locus_tag=IY40_RS06265;product=MFS transporter;protein_id=WP_033637849.1;transl_table=11 NZ_JPQY01000009.1 RefSeq gene 82082 82447 . + . ID=gene-IY40_RS06270;Name=IY40_RS06270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS06270;old_locus_tag=IY40_06375 NZ_JPQY01000009.1 Protein Homology CDS 82082 82447 . + 0 ID=cds-WP_043137700.1;Parent=gene-IY40_RS06270;Dbxref=GenBank:WP_043137700.1;Name=WP_043137700.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015377322.1;locus_tag=IY40_RS06270;product=DUF1801 domain-containing protein;protein_id=WP_043137700.1;transl_table=11 NZ_JPQY01000009.1 RefSeq gene 82499 83791 . - . ID=gene-IY40_RS06275;Name=serS;gbkey=Gene;gene=serS;gene_biotype=protein_coding;locus_tag=IY40_RS06275;old_locus_tag=IY40_06380 NZ_JPQY01000009.1 Protein Homology CDS 82499 83791 . - 0 ID=cds-WP_025302270.1;Parent=gene-IY40_RS06275;Dbxref=GenBank:WP_025302270.1;Name=WP_025302270.1;Ontology_term=GO:0006434,GO:0000166,GO:0004828,GO:0005524;gbkey=CDS;gene=serS;go_function=nucleotide binding|0000166||IEA,serine-tRNA ligase activity|0004828||IEA,ATP binding|0005524||IEA;go_process=seryl-tRNA aminoacylation|0006434||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012006116.1;locus_tag=IY40_RS06275;product=serine--tRNA ligase;protein_id=WP_025302270.1;transl_table=11 NZ_JPQY01000009.1 RefSeq gene 83901 85187 . - . ID=gene-IY40_RS06280;Name=IY40_RS06280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS06280;old_locus_tag=IY40_06385 NZ_JPQY01000009.1 Protein Homology CDS 83901 85187 . - 0 ID=cds-WP_049208098.1;Parent=gene-IY40_RS06280;Dbxref=GenBank:WP_049208098.1;Name=WP_049208098.1;Ontology_term=GO:0006260,GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010429205.1;locus_tag=IY40_RS06280;product=replication-associated recombination protein A;protein_id=WP_049208098.1;transl_table=11 NZ_JPQY01000009.1 RefSeq gene 85255 85866 . - . ID=gene-IY40_RS06285;Name=lolA;gbkey=Gene;gene=lolA;gene_biotype=protein_coding;locus_tag=IY40_RS06285;old_locus_tag=IY40_06390 NZ_JPQY01000009.1 Protein Homology CDS 85255 85866 . - 0 ID=cds-WP_015377319.1;Parent=gene-IY40_RS06285;Dbxref=GenBank:WP_015377319.1;Name=WP_015377319.1;Ontology_term=GO:0042953,GO:0042597;gbkey=CDS;gene=lolA;go_component=periplasmic space|0042597||IEA;go_process=lipoprotein transport|0042953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013812282.1;locus_tag=IY40_RS06285;product=outer membrane lipoprotein chaperone LolA;protein_id=WP_015377319.1;transl_table=11 NZ_JPQY01000009.1 RefSeq gene 86064 89723 . - . ID=gene-IY40_RS06290;Name=IY40_RS06290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS06290;old_locus_tag=IY40_06395 NZ_JPQY01000009.1 Protein Homology CDS 86064 89723 . - 0 ID=cds-WP_043137706.1;Parent=gene-IY40_RS06290;Dbxref=GenBank:WP_043137706.1;Name=WP_043137706.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013812281.1;locus_tag=IY40_RS06290;product=DNA translocase FtsK 4TM domain-containing protein;protein_id=WP_043137706.1;transl_table=11 NZ_JPQY01000009.1 RefSeq gene 89844 90338 . - . ID=gene-IY40_RS06295;Name=lrp;gbkey=Gene;gene=lrp;gene_biotype=protein_coding;locus_tag=IY40_RS06295;old_locus_tag=IY40_06400 NZ_JPQY01000009.1 Protein Homology CDS 89844 90338 . - 0 ID=cds-WP_004928318.1;Parent=gene-IY40_RS06295;Dbxref=GenBank:WP_004928318.1;Name=WP_004928318.1;gbkey=CDS;gene=lrp;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001591745.1;locus_tag=IY40_RS06295;product=leucine-responsive transcriptional regulator Lrp;protein_id=WP_004928318.1;transl_table=11 NZ_JPQY01000009.1 RefSeq gene 90993 91964 . + . ID=gene-IY40_RS06300;Name=trxB;gbkey=Gene;gene=trxB;gene_biotype=protein_coding;locus_tag=IY40_RS06300;old_locus_tag=IY40_06405 NZ_JPQY01000009.1 Protein Homology CDS 90993 91964 . + 0 ID=cds-WP_043137708.1;Parent=gene-IY40_RS06300;Dbxref=GenBank:WP_043137708.1;Name=WP_043137708.1;Ontology_term=GO:0019430,GO:0004791;gbkey=CDS;gene=trxB;go_function=thioredoxin-disulfide reductase (NADPH) activity|0004791||IEA;go_process=removal of superoxide radicals|0019430||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015671743.1;locus_tag=IY40_RS06300;product=thioredoxin-disulfide reductase;protein_id=WP_043137708.1;transl_table=11 NZ_JPQY01000009.1 RefSeq gene 92041 92928 . + . ID=gene-IY40_RS06305;Name=IY40_RS06305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS06305;old_locus_tag=IY40_06410 NZ_JPQY01000009.1 Protein Homology CDS 92041 92928 . + 0 ID=cds-WP_043137710.1;Parent=gene-IY40_RS06305;Dbxref=GenBank:WP_043137710.1;Name=WP_043137710.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004928325.1;locus_tag=IY40_RS06305;product=LysR family transcriptional regulator;protein_id=WP_043137710.1;transl_table=11 NZ_JPQY01000009.1 RefSeq gene 93022 93639 . + . ID=gene-IY40_RS06310;Name=gstA;gbkey=Gene;gene=gstA;gene_biotype=protein_coding;locus_tag=IY40_RS06310;old_locus_tag=IY40_06415 NZ_JPQY01000009.1 Protein Homology CDS 93022 93639 . + 0 ID=cds-WP_043137713.1;Parent=gene-IY40_RS06310;Dbxref=GenBank:WP_043137713.1;Name=WP_043137713.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;gene=gstA;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013812279.1;locus_tag=IY40_RS06310;product=glutathione transferase GstA;protein_id=WP_043137713.1;transl_table=11 NZ_JPQY01000009.1 RefSeq gene 93815 95581 . + . ID=gene-IY40_RS06315;Name=cydD;gbkey=Gene;gene=cydD;gene_biotype=protein_coding;locus_tag=IY40_RS06315;old_locus_tag=IY40_06420 NZ_JPQY01000009.1 Protein Homology CDS 93815 95581 . + 0 ID=cds-WP_043137715.1;Parent=gene-IY40_RS06315;Dbxref=GenBank:WP_043137715.1;Name=WP_043137715.1;Ontology_term=GO:0005524,GO:0140359,GO:0016020;gbkey=CDS;gene=cydD;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105386.1;locus_tag=IY40_RS06315;product=heme ABC transporter permease/ATP-binding protein CydD;protein_id=WP_043137715.1;transl_table=11 NZ_JPQY01000009.1 RefSeq gene 95584 97323 . + . ID=gene-IY40_RS06320;Name=cydC;gbkey=Gene;gene=cydC;gene_biotype=protein_coding;locus_tag=IY40_RS06320;old_locus_tag=IY40_06425 NZ_JPQY01000009.1 Protein Homology CDS 95584 97323 . + 0 ID=cds-WP_043137717.1;Parent=gene-IY40_RS06320;Dbxref=GenBank:WP_043137717.1;Name=WP_043137717.1;Ontology_term=GO:0045454,GO:0005524,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;gene=cydC;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016928333.1;locus_tag=IY40_RS06320;product=heme ABC transporter ATP-binding protein/permease CydC;protein_id=WP_043137717.1;transl_table=11 NZ_JPQY01000009.1 RefSeq gene 97353 98078 . + . ID=gene-IY40_RS06325;Name=aat;gbkey=Gene;gene=aat;gene_biotype=protein_coding;locus_tag=IY40_RS06325;old_locus_tag=IY40_06430 NZ_JPQY01000009.1 Protein Homology CDS 97353 98078 . + 0 ID=cds-WP_043137718.1;Parent=gene-IY40_RS06325;Dbxref=GenBank:WP_043137718.1;Name=WP_043137718.1;Ontology_term=GO:0006508,GO:0008914;gbkey=CDS;gene=aat;go_function=leucyl-tRNA--protein transferase activity|0008914||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015671740.1;locus_tag=IY40_RS06325;product=leucyl/phenylalanyl-tRNA--protein transferase;protein_id=WP_043137718.1;transl_table=11 NZ_JPQY01000009.1 RefSeq gene 98184 98402 . + . ID=gene-IY40_RS06330;Name=infA;gbkey=Gene;gene=infA;gene_biotype=protein_coding;locus_tag=IY40_RS06330;old_locus_tag=IY40_06435 NZ_JPQY01000009.1 Protein Homology CDS 98184 98402 . + 0 ID=cds-WP_002211347.1;Parent=gene-IY40_RS06330;Dbxref=GenBank:WP_002211347.1;Name=WP_002211347.1;Ontology_term=GO:0006413,GO:0003743;gbkey=CDS;gene=infA;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001040186.1;locus_tag=IY40_RS06330;product=translation initiation factor IF-1;protein_id=WP_002211347.1;transl_table=11 NZ_JPQY01000009.1 RefSeq gene 98608 100887 . - . ID=gene-IY40_RS06335;Name=clpA;gbkey=Gene;gene=clpA;gene_biotype=protein_coding;locus_tag=IY40_RS06335;old_locus_tag=IY40_06440 NZ_JPQY01000009.1 Protein Homology CDS 98608 100887 . - 0 ID=cds-WP_025302261.1;Parent=gene-IY40_RS06335;Dbxref=GenBank:WP_025302261.1;Name=WP_025302261.1;Ontology_term=GO:0043335,GO:0005524,GO:0016887;gbkey=CDS;gene=clpA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein unfolding|0043335||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003849320.1;locus_tag=IY40_RS06335;product=ATP-dependent Clp protease ATP-binding subunit ClpA;protein_id=WP_025302261.1;transl_table=11 NZ_JPQY01000009.1 RefSeq gene 100915 101235 . - . ID=gene-IY40_RS06340;Name=clpS;gbkey=Gene;gene=clpS;gene_biotype=protein_coding;locus_tag=IY40_RS06340;old_locus_tag=IY40_06445 NZ_JPQY01000009.1 Protein Homology CDS 100915 101235 . - 0 ID=cds-WP_004928347.1;Parent=gene-IY40_RS06340;Dbxref=GenBank:WP_004928347.1;Name=WP_004928347.1;Ontology_term=GO:0006508;gbkey=CDS;gene=clpS;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004928347.1;locus_tag=IY40_RS06340;product=ATP-dependent Clp protease adapter ClpS;protein_id=WP_004928347.1;transl_table=11 NZ_JPQY01000009.1 RefSeq gene 101591 101812 . + . ID=gene-IY40_RS06345;Name=cspD;gbkey=Gene;gene=cspD;gene_biotype=protein_coding;locus_tag=IY40_RS06345;old_locus_tag=IY40_06450 NZ_JPQY01000009.1 Protein Homology CDS 101591 101812 . + 0 ID=cds-WP_004928349.1;Parent=gene-IY40_RS06345;Dbxref=GenBank:WP_004928349.1;Name=WP_004928349.1;gbkey=CDS;gene=cspD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459920.1;locus_tag=IY40_RS06345;product=cold shock-like protein CspD;protein_id=WP_004928349.1;transl_table=11 NZ_JPQY01000009.1 RefSeq gene 101900 103846 . - . ID=gene-IY40_RS06350;Name=macB;gbkey=Gene;gene=macB;gene_biotype=protein_coding;locus_tag=IY40_RS06350;old_locus_tag=IY40_06455 NZ_JPQY01000009.1 Protein Homology CDS 101900 103846 . - 0 ID=cds-WP_043137720.1;Parent=gene-IY40_RS06350;Dbxref=GenBank:WP_043137720.1;Name=WP_043137720.1;Ontology_term=GO:0005524,GO:0022857,GO:1990195;gbkey=CDS;gene=macB;go_component=macrolide transmembrane transporter complex|1990195||IEA;go_function=ATP binding|0005524||IEA,transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004710702.1;locus_tag=IY40_RS06350;product=macrolide ABC transporter ATP-binding protein/permease MacB;protein_id=WP_043137720.1;transl_table=11 NZ_JPQY01000009.1 RefSeq gene 103846 104961 . - . ID=gene-IY40_RS06355;Name=macA;gbkey=Gene;gene=macA;gene_biotype=protein_coding;locus_tag=IY40_RS06355;old_locus_tag=IY40_06460 NZ_JPQY01000009.1 Protein Homology CDS 103846 104961 . - 0 ID=cds-WP_043137722.1;Parent=gene-IY40_RS06355;Dbxref=GenBank:WP_043137722.1;Name=WP_043137722.1;Ontology_term=GO:1990961,GO:0022857,GO:0019898,GO:1990195;gbkey=CDS;gene=macA;go_component=extrinsic component of membrane|0019898||IEA,macrolide transmembrane transporter complex|1990195||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=xenobiotic detoxification by transmembrane export across the plasma membrane|1990961||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004928355.1;locus_tag=IY40_RS06355;product=macrolide transporter subunit MacA;protein_id=WP_043137722.1;transl_table=11 NZ_JPQY01000009.1 RefSeq gene 105156 106109 . + . ID=gene-IY40_RS06360;Name=IY40_RS06360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS06360;old_locus_tag=IY40_06465 NZ_JPQY01000009.1 Protein Homology CDS 105156 106109 . + 0 ID=cds-WP_043137726.1;Parent=gene-IY40_RS06360;Dbxref=GenBank:WP_043137726.1;Name=WP_043137726.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004928358.1;locus_tag=IY40_RS06360;product=VirK/YbjX family protein;protein_id=WP_043137726.1;transl_table=11 NZ_JPQY01000009.1 RefSeq gene 106124 107782 . - . ID=gene-IY40_RS06365;Name=IY40_RS06365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS06365;old_locus_tag=IY40_06470 NZ_JPQY01000009.1 Protein Homology CDS 106124 107782 . - 0 ID=cds-WP_025302257.1;Parent=gene-IY40_RS06365;Dbxref=GenBank:WP_025302257.1;Name=WP_025302257.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005275059.1;locus_tag=IY40_RS06365;product=ATP-dependent endonuclease;protein_id=WP_025302257.1;transl_table=11 NZ_JPQY01000009.1 RefSeq gene 107970 108866 . + . ID=gene-IY40_RS06370;Name=IY40_RS06370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS06370;old_locus_tag=IY40_06475 NZ_JPQY01000009.1 Protein Homology CDS 107970 108866 . + 0 ID=cds-WP_043137731.1;Parent=gene-IY40_RS06370;Dbxref=GenBank:WP_043137731.1;Name=WP_043137731.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211358.1;locus_tag=IY40_RS06370;product=LysO family transporter;protein_id=WP_043137731.1;transl_table=11 NZ_JPQY01000009.1 RefSeq gene 109047 110696 . + . ID=gene-IY40_RS06375;Name=hcp;gbkey=Gene;gene=hcp;gene_biotype=protein_coding;gene_synonym=priS;locus_tag=IY40_RS06375;old_locus_tag=IY40_06480 NZ_JPQY01000009.1 Protein Homology CDS 109047 110696 . + 0 ID=cds-WP_043137734.1;Parent=gene-IY40_RS06375;Dbxref=GenBank:WP_043137734.1;Name=WP_043137734.1;Ontology_term=GO:0016661,GO:0051536;gbkey=CDS;gene=hcp;go_function=oxidoreductase activity%2C acting on other nitrogenous compounds as donors|0016661||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019454566.1;locus_tag=IY40_RS06375;product=hydroxylamine reductase;protein_id=WP_043137734.1;transl_table=11 NZ_JPQY01000009.1 RefSeq gene 110753 111754 . + . ID=gene-IY40_RS06380;Name=hcr;gbkey=Gene;gene=hcr;gene_biotype=protein_coding;locus_tag=IY40_RS06380;old_locus_tag=IY40_06485 NZ_JPQY01000009.1 Protein Homology CDS 110753 111754 . + 0 ID=cds-WP_043137737.1;Parent=gene-IY40_RS06380;Dbxref=GenBank:WP_043137737.1;Name=WP_043137737.1;Ontology_term=GO:0016491,GO:0051536;gbkey=CDS;gene=hcr;go_function=oxidoreductase activity|0016491||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017892244.1;locus_tag=IY40_RS06380;product=NADH oxidoreductase;protein_id=WP_043137737.1;transl_table=11 NZ_JPQY01000009.1 RefSeq gene 111954 113675 . + . ID=gene-IY40_RS06385;Name=poxB;gbkey=Gene;gene=poxB;gene_biotype=protein_coding;locus_tag=IY40_RS06385;old_locus_tag=IY40_06490 NZ_JPQY01000009.1 Protein Homology CDS 111954 113675 . + 0 ID=cds-WP_025302253.1;Parent=gene-IY40_RS06385;Dbxref=GenBank:WP_025302253.1;Name=WP_025302253.1;Ontology_term=GO:0006090,GO:0000287,GO:0030976,GO:0052737;gbkey=CDS;gene=poxB;go_function=magnesium ion binding|0000287||IEA,thiamine pyrophosphate binding|0030976||IEA,pyruvate dehydrogenase (quinone) activity|0052737||IEA;go_process=pyruvate metabolic process|0006090||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192046.1;locus_tag=IY40_RS06385;product=ubiquinone-dependent pyruvate dehydrogenase;protein_id=WP_025302253.1;transl_table=11 NZ_JPQY01000009.1 RefSeq gene 113753 114769 . + . ID=gene-IY40_RS06390;Name=ltaE;gbkey=Gene;gene=ltaE;gene_biotype=protein_coding;locus_tag=IY40_RS06390;old_locus_tag=IY40_06495 NZ_JPQY01000009.1 Protein Homology CDS 113753 114769 . + 0 ID=cds-WP_043137739.1;Parent=gene-IY40_RS06390;Dbxref=GenBank:WP_043137739.1;Name=WP_043137739.1;Ontology_term=GO:0006520,GO:0016829;gbkey=CDS;gene=ltaE;go_function=lyase activity|0016829||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105391.1;locus_tag=IY40_RS06390;product=low-specificity L-threonine aldolase;protein_id=WP_043137739.1;transl_table=11 NZ_JPQY01000009.1 RefSeq gene 114799 115494 . - . ID=gene-IY40_RS06395;Name=IY40_RS06395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS06395;old_locus_tag=IY40_06500 NZ_JPQY01000009.1 Protein Homology CDS 114799 115494 . - 0 ID=cds-WP_025302251.1;Parent=gene-IY40_RS06395;Dbxref=GenBank:WP_025302251.1;Name=WP_025302251.1;Ontology_term=GO:0005975,GO:0006051,GO:0019262,GO:0047465;gbkey=CDS;go_function=N-acylglucosamine-6-phosphate 2-epimerase activity|0047465||IEA;go_process=carbohydrate metabolic process|0005975||IEA,N-acetylmannosamine metabolic process|0006051||IEA,N-acetylneuraminate catabolic process|0019262||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004928379.1;locus_tag=IY40_RS06395;product=N-acetylmannosamine-6-phosphate 2-epimerase;protein_id=WP_025302251.1;transl_table=11 NZ_JPQY01000009.1 RefSeq gene 115491 117047 . - . ID=gene-IY40_RS06400;Name=IY40_RS06400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS06400;old_locus_tag=IY40_06505 NZ_JPQY01000009.1 Protein Homology CDS 115491 117047 . - 0 ID=cds-WP_043137742.1;Parent=gene-IY40_RS06400;Dbxref=GenBank:WP_043137742.1;Name=WP_043137742.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005189919.1;locus_tag=IY40_RS06400;product=PTS transporter subunit EIIC;protein_id=WP_043137742.1;transl_table=11 NZ_JPQY01000009.1 RefSeq gene 117215 118042 . + . ID=gene-IY40_RS06405;Name=IY40_RS06405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS06405;old_locus_tag=IY40_06510 NZ_JPQY01000009.1 Protein Homology CDS 117215 118042 . + 0 ID=cds-WP_043137744.1;Parent=gene-IY40_RS06405;Dbxref=GenBank:WP_043137744.1;Name=WP_043137744.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020883807.1;locus_tag=IY40_RS06405;product=MurR/RpiR family transcriptional regulator;protein_id=WP_043137744.1;transl_table=11 NZ_JPQY01000009.1 RefSeq gene 118043 118390 . - . ID=gene-IY40_RS06410;Name=IY40_RS06410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS06410;old_locus_tag=IY40_06515 NZ_JPQY01000009.1 Protein Homology CDS 118043 118390 . - 0 ID=cds-WP_043137745.1;Parent=gene-IY40_RS06410;Dbxref=GenBank:WP_043137745.1;Name=WP_043137745.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004928387.1;locus_tag=IY40_RS06410;product=DUF1294 domain-containing protein;protein_id=WP_043137745.1;transl_table=11 NZ_JPQY01000009.1 RefSeq gene 118541 119980 . + . ID=gene-IY40_RS06415;Name=IY40_RS06415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS06415;old_locus_tag=IY40_06520 NZ_JPQY01000009.1 Protein Homology CDS 118541 119980 . + 0 ID=cds-WP_043137748.1;Parent=gene-IY40_RS06415;Dbxref=GenBank:WP_043137748.1;Name=WP_043137748.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015377304.1;locus_tag=IY40_RS06415;product=DUF2867 domain-containing protein;protein_id=WP_043137748.1;transl_table=11 NZ_JPQY01000009.1 RefSeq gene 120139 121149 . + . ID=gene-IY40_RS06420;Name=IY40_RS06420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS06420;old_locus_tag=IY40_06525 NZ_JPQY01000009.1 Protein Homology CDS 120139 121149 . + 0 ID=cds-WP_004928393.1;Parent=gene-IY40_RS06420;Dbxref=GenBank:WP_004928393.1;Name=WP_004928393.1;Ontology_term=GO:0016491,GO:0051287,GO:0070403;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD binding|0051287||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004965035.1;locus_tag=IY40_RS06420;product=NAD-dependent epimerase/dehydratase family protein;protein_id=WP_004928393.1;transl_table=11 NZ_JPQY01000009.1 RefSeq gene 121150 121986 . - . ID=gene-IY40_RS06425;Name=IY40_RS06425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS06425;old_locus_tag=IY40_06530 NZ_JPQY01000009.1 Protein Homology CDS 121150 121986 . - 0 ID=cds-WP_043137752.1;Parent=gene-IY40_RS06425;Dbxref=GenBank:WP_043137752.1;Name=WP_043137752.1;Ontology_term=GO:0071555,GO:0008270,GO:0008745,GO:0042834,GO:0046872;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA,peptidoglycan binding|0042834||IEA,metal ion binding|0046872||IEA;go_process=cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013812262.1;locus_tag=IY40_RS06425;product=N-acetylmuramoyl-L-alanine amidase;protein_id=WP_043137752.1;transl_table=11 NZ_JPQY01000009.1 RefSeq gene 122172 123686 . + . ID=gene-IY40_RS06430;Name=IY40_RS06430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS06430;old_locus_tag=IY40_06535 NZ_JPQY01000009.1 Protein Homology CDS 122172 123686 . + 0 ID=cds-WP_043137757.1;Parent=gene-IY40_RS06430;Dbxref=GenBank:WP_043137757.1;Name=WP_043137757.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016928350.1;locus_tag=IY40_RS06430;product=DUF3300 domain-containing protein;protein_id=WP_043137757.1;transl_table=11 NZ_JPQY01000009.1 RefSeq gene 123736 124059 . - . ID=gene-IY40_RS06435;Name=IY40_RS06435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS06435;old_locus_tag=IY40_06540 NZ_JPQY01000009.1 Protein Homology CDS 123736 124059 . - 0 ID=cds-WP_004928400.1;Parent=gene-IY40_RS06435;Dbxref=GenBank:WP_004928400.1;Name=WP_004928400.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459907.1;locus_tag=IY40_RS06435;product=heavy metal-binding domain-containing protein;protein_id=WP_004928400.1;transl_table=11 NZ_JPQY01000009.1 RefSeq gene 124219 124761 . + . ID=gene-IY40_RS06440;Name=IY40_RS06440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS06440;old_locus_tag=IY40_06545 NZ_JPQY01000009.1 Protein Homology CDS 124219 124761 . + 0 ID=cds-WP_043137760.1;Parent=gene-IY40_RS06440;Dbxref=GenBank:WP_043137760.1;Name=WP_043137760.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017892237.1;locus_tag=IY40_RS06440;product=lipoprotein;protein_id=WP_043137760.1;transl_table=11 NZ_JPQY01000009.1 RefSeq gene 125026 125754 . + . ID=gene-IY40_RS06445;Name=artP;gbkey=Gene;gene=artP;gene_biotype=protein_coding;locus_tag=IY40_RS06445;old_locus_tag=IY40_06550 NZ_JPQY01000009.1 Protein Homology CDS 125026 125754 . + 0 ID=cds-WP_016928352.1;Parent=gene-IY40_RS06445;Dbxref=GenBank:WP_016928352.1;Name=WP_016928352.1;Ontology_term=GO:0003333,GO:0005524,GO:0015424,GO:0043190;gbkey=CDS;gene=artP;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ABC-type amino acid transporter activity|0015424||IEA;go_process=amino acid transmembrane transport|0003333||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001742668.1;locus_tag=IY40_RS06445;product=arginine ABC transporter ATP-binding protein ArtP;protein_id=WP_016928352.1;transl_table=11 NZ_JPQY01000009.1 RefSeq gene 125787 126518 . + . ID=gene-IY40_RS06450;Name=artJ;gbkey=Gene;gene=artJ;gene_biotype=protein_coding;locus_tag=IY40_RS06450;old_locus_tag=IY40_06555 NZ_JPQY01000009.1 Protein Homology CDS 125787 126518 . + 0 ID=cds-WP_025302242.1;Parent=gene-IY40_RS06450;Dbxref=GenBank:WP_025302242.1;Name=WP_025302242.1;gbkey=CDS;gene=artJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459866.1;locus_tag=IY40_RS06450;product=arginine ABC transporter substrate-binding protein;protein_id=WP_025302242.1;transl_table=11 NZ_JPQY01000009.1 RefSeq gene 126528 127244 . + . ID=gene-IY40_RS06455;Name=artQ;gbkey=Gene;gene=artQ;gene_biotype=protein_coding;locus_tag=IY40_RS06455;old_locus_tag=IY40_06560 NZ_JPQY01000009.1 Protein Homology CDS 126528 127244 . + 0 ID=cds-WP_025159684.1;Parent=gene-IY40_RS06455;Dbxref=GenBank:WP_025159684.1;Name=WP_025159684.1;Ontology_term=GO:0055085,GO:0071705,GO:0022857,GO:0016020,GO:0043190;gbkey=CDS;gene=artQ;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA,nitrogen compound transport|0071705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004965053.1;locus_tag=IY40_RS06455;product=arginine ABC transporter permease ArtQ;protein_id=WP_025159684.1;transl_table=11 NZ_JPQY01000009.1 RefSeq gene 127244 127912 . + . ID=gene-IY40_RS06460;Name=artM;gbkey=Gene;gene=artM;gene_biotype=protein_coding;locus_tag=IY40_RS06460;old_locus_tag=IY40_06565 NZ_JPQY01000009.1 Protein Homology CDS 127244 127912 . + 0 ID=cds-WP_025302241.1;Parent=gene-IY40_RS06460;Dbxref=GenBank:WP_025302241.1;Name=WP_025302241.1;Ontology_term=GO:0071705,GO:0022857,GO:0016020,GO:0043190;gbkey=CDS;gene=artM;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=nitrogen compound transport|0071705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015671714.1;locus_tag=IY40_RS06460;product=arginine ABC transporter permease ArtM;protein_id=WP_025302241.1;transl_table=11 NZ_JPQY01000009.1 RefSeq gene 128112 128846 . + . ID=gene-IY40_RS06465;Name=artJ;gbkey=Gene;gene=artJ;gene_biotype=protein_coding;locus_tag=IY40_RS06465;old_locus_tag=IY40_06570 NZ_JPQY01000009.1 Protein Homology CDS 128112 128846 . + 0 ID=cds-WP_015377297.1;Parent=gene-IY40_RS06465;Dbxref=GenBank:WP_015377297.1;Name=WP_015377297.1;gbkey=CDS;gene=artJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001295339.1;locus_tag=IY40_RS06465;product=arginine ABC transporter substrate-binding protein;protein_id=WP_015377297.1;transl_table=11 NZ_JPQY01000009.1 RefSeq gene 128879 130009 . - . ID=gene-IY40_RS06470;Name=rlmC;gbkey=Gene;gene=rlmC;gene_biotype=protein_coding;locus_tag=IY40_RS06470;old_locus_tag=IY40_06575 NZ_JPQY01000009.1 Protein Homology CDS 128879 130009 . - 0 ID=cds-WP_025302240.1;Parent=gene-IY40_RS06470;Dbxref=GenBank:WP_025302240.1;Name=WP_025302240.1;Ontology_term=GO:0000154,GO:0016070,GO:0008649;gbkey=CDS;gene=rlmC;go_function=rRNA methyltransferase activity|0008649||IEA;go_process=rRNA modification|0000154||IEA,RNA metabolic process|0016070||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015377295.1;locus_tag=IY40_RS06470;product=23S rRNA (uracil(747)-C(5))-methyltransferase RlmC;protein_id=WP_025302240.1;transl_table=11 NZ_JPQY01000009.1 RefSeq gene 130079 130558 . - . ID=gene-IY40_RS06475;Name=IY40_RS06475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS06475;old_locus_tag=IY40_06580 NZ_JPQY01000009.1 Protein Homology CDS 130079 130558 . - 0 ID=cds-WP_025302239.1;Parent=gene-IY40_RS06475;Dbxref=GenBank:WP_025302239.1;Name=WP_025302239.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015377294.1;locus_tag=IY40_RS06475;product=YbjO family protein;protein_id=WP_025302239.1;transl_table=11 NZ_JPQY01000009.1 RefSeq gene 130663 131508 . - . ID=gene-IY40_RS06480;Name=potI;gbkey=Gene;gene=potI;gene_biotype=protein_coding;locus_tag=IY40_RS06480;old_locus_tag=IY40_06585 NZ_JPQY01000009.1 Protein Homology CDS 130663 131508 . - 0 ID=cds-WP_025302238.1;Parent=gene-IY40_RS06480;Dbxref=GenBank:WP_025302238.1;Name=WP_025302238.1;Ontology_term=GO:0055085;gbkey=CDS;gene=potI;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004965061.1;locus_tag=IY40_RS06480;product=putrescine ABC transporter permease PotI;protein_id=WP_025302238.1;transl_table=11 NZ_JPQY01000009.1 RefSeq gene 131505 132467 . - . ID=gene-IY40_RS06485;Name=potH;gbkey=Gene;gene=potH;gene_biotype=protein_coding;locus_tag=IY40_RS06485;old_locus_tag=IY40_06590 NZ_JPQY01000009.1 Protein Homology CDS 131505 132467 . - 0 ID=cds-WP_043137769.1;Parent=gene-IY40_RS06485;Dbxref=GenBank:WP_043137769.1;Name=WP_043137769.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=potH;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006324517.1;locus_tag=IY40_RS06485;product=putrescine ABC transporter permease PotH;protein_id=WP_043137769.1;transl_table=11 NZ_JPQY01000009.1 RefSeq gene 132492 133625 . - . ID=gene-IY40_RS06490;Name=potG;gbkey=Gene;gene=potG;gene_biotype=protein_coding;locus_tag=IY40_RS06490;old_locus_tag=IY40_06595 NZ_JPQY01000009.1 Protein Homology CDS 132492 133625 . - 0 ID=cds-WP_043137773.1;Parent=gene-IY40_RS06490;Dbxref=GenBank:WP_043137773.1;Name=WP_043137773.1;Ontology_term=GO:0015846,GO:0055085,GO:0005524,GO:0015417,GO:0022857,GO:0043190;gbkey=CDS;gene=potG;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ABC-type polyamine transporter activity|0015417||IEA,transmembrane transporter activity|0022857||IEA;go_process=polyamine transport|0015846||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000996010.1;locus_tag=IY40_RS06490;product=putrescine ABC transporter ATP-binding subunit PotG;protein_id=WP_043137773.1;transl_table=11 NZ_JPQY01000009.1 RefSeq gene 133748 134857 . - . ID=gene-IY40_RS06495;Name=potF;gbkey=Gene;gene=potF;gene_biotype=protein_coding;locus_tag=IY40_RS06495;old_locus_tag=IY40_06600 NZ_JPQY01000009.1 Protein Homology CDS 133748 134857 . - 0 ID=cds-WP_043137777.1;Parent=gene-IY40_RS06495;Dbxref=GenBank:WP_043137777.1;Name=WP_043137777.1;Ontology_term=GO:0015846,GO:0019808,GO:0042597;gbkey=CDS;gene=potF;go_component=periplasmic space|0042597||IEA;go_function=polyamine binding|0019808||IEA;go_process=polyamine transport|0015846||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208762.1;locus_tag=IY40_RS06495;product=spermidine/putrescine ABC transporter substrate-binding protein PotF;protein_id=WP_043137777.1;transl_table=11 NZ_JPQY01000009.1 RefSeq gene 135264 135743 . - . ID=gene-IY40_RS06500;Name=IY40_RS06500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS06500;old_locus_tag=IY40_06605 NZ_JPQY01000009.1 Protein Homology CDS 135264 135743 . - 0 ID=cds-WP_004938666.1;Parent=gene-IY40_RS06500;Dbxref=GenBank:WP_004938666.1;Name=WP_004938666.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208763.1;locus_tag=IY40_RS06500;product=type III secretion system chaperone family protein;protein_id=WP_004938666.1;transl_table=11 NZ_JPQY01000009.1 RefSeq gene 135880 136782 . - . ID=gene-IY40_RS06505;Name=rimK;gbkey=Gene;gene=rimK;gene_biotype=protein_coding;locus_tag=IY40_RS06505;old_locus_tag=IY40_06610 NZ_JPQY01000009.1 Protein Homology CDS 135880 136782 . - 0 ID=cds-WP_025302234.1;Parent=gene-IY40_RS06505;Dbxref=GenBank:WP_025302234.1;Name=WP_025302234.1;Ontology_term=GO:0036211,GO:0005524,GO:0046872;gbkey=CDS;gene=rimK;go_function=ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459852.1;locus_tag=IY40_RS06505;product=30S ribosomal protein S6--L-glutamate ligase;protein_id=WP_025302234.1;transl_table=11 NZ_JPQY01000009.1 RefSeq gene 136837 137151 . - . ID=gene-IY40_RS06510;Name=IY40_RS06510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS06510;old_locus_tag=IY40_06615 NZ_JPQY01000009.1 Protein Homology CDS 136837 137151 . - 0 ID=cds-WP_025302233.1;Parent=gene-IY40_RS06510;Dbxref=GenBank:WP_025302233.1;Name=WP_025302233.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019454586.1;locus_tag=IY40_RS06510;product=YbjC family protein;protein_id=WP_025302233.1;transl_table=11 NZ_JPQY01000009.1 RefSeq gene 137382 137645 . + . ID=gene-IY40_RS06515;Name=IY40_RS06515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS06515;old_locus_tag=IY40_06620 NZ_JPQY01000009.1 Protein Homology CDS 137382 137645 . + 0 ID=cds-WP_004938676.1;Parent=gene-IY40_RS06515;Dbxref=GenBank:WP_004938676.1;Name=WP_004938676.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004873700.1;locus_tag=IY40_RS06515;product=GrxA family glutaredoxin;protein_id=WP_004938676.1;transl_table=11 NZ_JPQY01000009.1 RefSeq gene 137685 138074 . - . ID=gene-IY40_RS06520;Name=IY40_RS06520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS06520;old_locus_tag=IY40_06625 NZ_JPQY01000009.1 Protein Homology CDS 137685 138074 . - 0 ID=cds-WP_043137782.1;Parent=gene-IY40_RS06520;Dbxref=GenBank:WP_043137782.1;Name=WP_043137782.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013812247.1;locus_tag=IY40_RS06520;product=inner membrane protein YbjM;protein_id=WP_043137782.1;transl_table=11 NZ_JPQY01000009.1 RefSeq gene 138369 140057 . + . ID=gene-IY40_RS06525;Name=IY40_RS06525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS06525;old_locus_tag=IY40_06630 NZ_JPQY01000009.1 Protein Homology CDS 138369 140057 . + 0 ID=cds-WP_043137785.1;Parent=gene-IY40_RS06525;Dbxref=GenBank:WP_043137785.1;Name=WP_043137785.1;Ontology_term=GO:0006813,GO:0008324;gbkey=CDS;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016678434.1;locus_tag=IY40_RS06525;product=aspartate:alanine antiporter;protein_id=WP_043137785.1;transl_table=11 NZ_JPQY01000009.1 RefSeq gene 140534 141277 . - . ID=gene-IY40_RS06530;Name=IY40_RS06530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS06530;old_locus_tag=IY40_06635 NZ_JPQY01000009.1 Protein Homology CDS 140534 141277 . - 0 ID=cds-WP_043137787.1;Parent=gene-IY40_RS06530;Dbxref=GenBank:WP_043137787.1;Name=WP_043137787.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004938681.1;locus_tag=IY40_RS06530;product=ankyrin repeat domain-containing protein;protein_id=WP_043137787.1;transl_table=11 NZ_JPQY01000009.1 RefSeq gene 141367 142140 . - . ID=gene-IY40_RS06535;Name=IY40_RS06535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS06535;old_locus_tag=IY40_06640 NZ_JPQY01000009.1 Protein Homology CDS 141367 142140 . - 0 ID=cds-WP_043137789.1;Parent=gene-IY40_RS06535;Dbxref=GenBank:WP_043137789.1;Name=WP_043137789.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012443015.1;locus_tag=IY40_RS06535;product=ankyrin repeat domain-containing protein;protein_id=WP_043137789.1;transl_table=11 NZ_JPQY01000009.1 RefSeq gene 142137 143618 . - . ID=gene-IY40_RS06540;Name=IY40_RS06540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS06540;old_locus_tag=IY40_06645 NZ_JPQY01000009.1 Protein Homology CDS 142137 143618 . - 0 ID=cds-WP_043137792.1;Parent=gene-IY40_RS06540;Dbxref=GenBank:WP_043137792.1;Name=WP_043137792.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004938682.1;locus_tag=IY40_RS06540;product=hypothetical protein;protein_id=WP_043137792.1;transl_table=11 NZ_JPQY01000009.1 RefSeq gene 144032 144544 . - . ID=gene-IY40_RS06545;Name=eco;gbkey=Gene;gene=eco;gene_biotype=protein_coding;locus_tag=IY40_RS06545;old_locus_tag=IY40_06650 NZ_JPQY01000009.1 Protein Homology CDS 144032 144544 . - 0 ID=cds-WP_033642514.1;Parent=gene-IY40_RS06545;Dbxref=GenBank:WP_033642514.1;Name=WP_033642514.1;Ontology_term=GO:0004867;gbkey=CDS;gene=eco;go_function=serine-type endopeptidase inhibitor activity|0004867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012006070.1;locus_tag=IY40_RS06545;product=serine protease inhibitor ecotin;protein_id=WP_033642514.1;transl_table=11 NZ_JPQY01000009.1 RefSeq gene 144836 145570 . + . ID=gene-IY40_RS06550;Name=IY40_RS06550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS06550;old_locus_tag=IY40_06655 NZ_JPQY01000009.1 Protein Homology CDS 144836 145570 . + 0 ID=cds-WP_043137796.1;Parent=gene-IY40_RS06550;Dbxref=GenBank:WP_043137796.1;Name=WP_043137796.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020438775.1;locus_tag=IY40_RS06550;product=phosphatase PAP2 family protein;protein_id=WP_043137796.1;transl_table=11 NZ_JPQY01000009.1 RefSeq gene 145576 146181 . + . ID=gene-IY40_RS06555;Name=ybjG;gbkey=Gene;gene=ybjG;gene_biotype=protein_coding;locus_tag=IY40_RS06555;old_locus_tag=IY40_06660 NZ_JPQY01000009.1 Protein Homology CDS 145576 146181 . + 0 ID=cds-WP_025302225.1;Parent=gene-IY40_RS06555;Dbxref=GenBank:WP_025302225.1;Name=WP_025302225.1;Ontology_term=GO:0050380,GO:0005886;gbkey=CDS;gene=ybjG;go_component=plasma membrane|0005886||IEA;go_function=undecaprenyl-diphosphatase activity|0050380||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012006067.1;locus_tag=IY40_RS06555;product=undecaprenyl-diphosphate phosphatase;protein_id=WP_025302225.1;transl_table=11 NZ_JPQY01000009.1 RefSeq gene 146218 147051 . - . ID=gene-IY40_RS06560;Name=IY40_RS06560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS06560;old_locus_tag=IY40_06665 NZ_JPQY01000009.1 Protein Homology CDS 146218 147051 . - 0 ID=cds-WP_043137801.1;Parent=gene-IY40_RS06560;Dbxref=GenBank:WP_043137801.1;Name=WP_043137801.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015377284.1;locus_tag=IY40_RS06560;product=aldose epimerase family protein;protein_id=WP_043137801.1;transl_table=11 NZ_JPQY01000009.1 RefSeq gene 147265 147945 . + . ID=gene-IY40_RS06565;Name=deoC;gbkey=Gene;gene=deoC;gene_biotype=protein_coding;locus_tag=IY40_RS06565;old_locus_tag=IY40_06670 NZ_JPQY01000009.1 Protein Homology CDS 147265 147945 . + 0 ID=cds-WP_043137805.1;Parent=gene-IY40_RS06565;Dbxref=GenBank:WP_043137805.1;Name=WP_043137805.1;Ontology_term=GO:0009264,GO:0004139,GO:0005737;gbkey=CDS;gene=deoC;go_component=cytoplasm|0005737||IEA;go_function=deoxyribose-phosphate aldolase activity|0004139||IEA;go_process=deoxyribonucleotide catabolic process|0009264||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015377283.1;locus_tag=IY40_RS06565;product=deoxyribose-phosphate aldolase;protein_id=WP_043137805.1;transl_table=11 NZ_JPQY01000009.1 RefSeq gene 148098 148862 . + . ID=gene-IY40_RS06570;Name=deoR;gbkey=Gene;gene=deoR;gene_biotype=protein_coding;locus_tag=IY40_RS06570;old_locus_tag=IY40_06675 NZ_JPQY01000009.1 Protein Homology CDS 148098 148862 . + 0 ID=cds-WP_025302222.1;Parent=gene-IY40_RS06570;Dbxref=GenBank:WP_025302222.1;Name=WP_025302222.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=deoR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017892220.1;locus_tag=IY40_RS06570;product=DNA-binding transcriptional repressor DeoR;protein_id=WP_025302222.1;transl_table=11 NZ_JPQY01000009.1 RefSeq gene 149842 151140 . + . ID=gene-IY40_RS06575;Name=IY40_RS06575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS06575;old_locus_tag=IY40_06680 NZ_JPQY01000009.1 Protein Homology CDS 149842 151140 . + 0 ID=cds-WP_004938697.1;Parent=gene-IY40_RS06575;Dbxref=GenBank:WP_004938697.1;Name=WP_004938697.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004938697.1;locus_tag=IY40_RS06575;product=HAAAP family serine/threonine permease;protein_id=WP_004938697.1;transl_table=11 NZ_JPQY01000009.1 RefSeq gene 151234 152601 . + . ID=gene-IY40_RS06580;Name=IY40_RS06580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS06580;old_locus_tag=IY40_06685 NZ_JPQY01000009.1 Protein Homology CDS 151234 152601 . + 0 ID=cds-WP_025302221.1;Parent=gene-IY40_RS06580;Dbxref=GenBank:WP_025302221.1;Name=WP_025302221.1;Ontology_term=GO:0006094,GO:0003941;gbkey=CDS;go_function=L-serine ammonia-lyase activity|0003941||IEA;go_process=gluconeogenesis|0006094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228517.1;locus_tag=IY40_RS06580;product=L-serine ammonia-lyase;protein_id=WP_025302221.1;transl_table=11 NZ_JPQY01000009.1 RefSeq gene 152656 153321 . - . ID=gene-IY40_RS06585;Name=IY40_RS06585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS06585;old_locus_tag=IY40_06690 NZ_JPQY01000009.1 Protein Homology CDS 152656 153321 . - 0 ID=cds-WP_043137810.1;Parent=gene-IY40_RS06585;Dbxref=GenBank:WP_043137810.1;Name=WP_043137810.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004938703.1;locus_tag=IY40_RS06585;product=response regulator transcription factor;protein_id=WP_043137810.1;transl_table=11 NZ_JPQY01000009.1 RefSeq gene 153318 154706 . - . ID=gene-IY40_RS06590;Name=IY40_RS06590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS06590;old_locus_tag=IY40_06695 NZ_JPQY01000009.1 Protein Homology CDS 153318 154706 . - 0 ID=cds-WP_043137813.1;Parent=gene-IY40_RS06590;Dbxref=GenBank:WP_043137813.1;Name=WP_043137813.1;Ontology_term=GO:0006457;gbkey=CDS;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004938708.1;locus_tag=IY40_RS06590;product=FKBP-type peptidyl-prolyl cis-trans isomerase N-terminal domain-containing protein;protein_id=WP_043137813.1;transl_table=11 NZ_JPQY01000009.1 RefSeq gene 154703 155125 . - . ID=gene-IY40_RS06595;Name=IY40_RS06595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS06595;old_locus_tag=IY40_06700 NZ_JPQY01000009.1 Protein Homology CDS 154703 155125 . - 0 ID=cds-WP_025302218.1;Parent=gene-IY40_RS06595;Dbxref=GenBank:WP_025302218.1;Name=WP_025302218.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016928377.1;locus_tag=IY40_RS06595;product=hypothetical protein;protein_id=WP_025302218.1;transl_table=11 NZ_JPQY01000009.1 RefSeq gene 155150 155704 . - . ID=gene-IY40_RS06600;Name=IY40_RS06600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS06600;old_locus_tag=IY40_06705 NZ_JPQY01000009.1 Protein Homology CDS 155150 155704 . - 0 ID=cds-WP_025302217.1;Parent=gene-IY40_RS06600;Dbxref=GenBank:WP_025302217.1;Name=WP_025302217.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004938719.1;locus_tag=IY40_RS06600;product=fimbrial protein;protein_id=WP_025302217.1;transl_table=11 NZ_JPQY01000009.1 RefSeq gene 155755 156393 . - . ID=gene-IY40_RS06605;Name=IY40_RS06605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS06605;old_locus_tag=IY40_06710 NZ_JPQY01000009.1 Protein Homology CDS 155755 156393 . - 0 ID=cds-WP_038629099.1;Parent=gene-IY40_RS06605;Dbxref=GenBank:WP_038629099.1;Name=WP_038629099.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016928379.1;locus_tag=IY40_RS06605;product=fimbrial protein;protein_id=WP_038629099.1;transl_table=11 NZ_JPQY01000009.1 RefSeq gene 156465 157229 . - . ID=gene-IY40_RS06610;Name=IY40_RS06610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS06610;old_locus_tag=IY40_06715 NZ_JPQY01000009.1 Protein Homology CDS 156465 157229 . - 0 ID=cds-WP_050505130.1;Parent=gene-IY40_RS06610;Dbxref=GenBank:WP_050505130.1;Name=WP_050505130.1;Ontology_term=GO:0071555,GO:0030288;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_process=cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019454603.1;locus_tag=IY40_RS06610;product=fimbria/pilus periplasmic chaperone;protein_id=WP_050505130.1;transl_table=11 NZ_JPQY01000009.1 RefSeq gene 157311 159845 . - . ID=gene-IY40_RS06615;Name=IY40_RS06615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS06615;old_locus_tag=IY40_06720 NZ_JPQY01000009.1 Protein Homology CDS 157311 159845 . - 0 ID=cds-WP_072271520.1;Parent=gene-IY40_RS06615;Dbxref=GenBank:WP_072271520.1;Name=WP_072271520.1;Ontology_term=GO:0009297,GO:0005515,GO:0015473,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein binding|0005515||IEA,fimbrial usher porin activity|0015473||IEA;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015377274.1;locus_tag=IY40_RS06615;product=outer membrane usher protein;protein_id=WP_072271520.1;transl_table=11 NZ_JPQY01000009.1 RefSeq gene 159893 160429 . - . ID=gene-IY40_RS06620;Name=IY40_RS06620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS06620;old_locus_tag=IY40_06725 NZ_JPQY01000009.1 Protein Homology CDS 159893 160429 . - 0 ID=cds-WP_025302213.1;Parent=gene-IY40_RS06620;Dbxref=GenBank:WP_025302213.1;Name=WP_025302213.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004938729.1;locus_tag=IY40_RS06620;product=fimbrial protein;protein_id=WP_025302213.1;transl_table=11 NZ_JPQY01000009.1 RefSeq gene 160508 161029 . - . ID=gene-IY40_RS06625;Name=IY40_RS06625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS06625;old_locus_tag=IY40_06730 NZ_JPQY01000009.1 Protein Homology CDS 160508 161029 . - 0 ID=cds-WP_025302212.1;Parent=gene-IY40_RS06625;Dbxref=GenBank:WP_025302212.1;Name=WP_025302212.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004938731.1;locus_tag=IY40_RS06625;product=fimbrial protein;protein_id=WP_025302212.1;transl_table=11 NZ_JPQY01000009.1 RefSeq gene 161694 162026 . + . ID=gene-IY40_RS06630;Name=IY40_RS06630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS06630;old_locus_tag=IY40_06735 NZ_JPQY01000009.1 Protein Homology CDS 161694 162026 . + 0 ID=cds-WP_025302211.1;Parent=gene-IY40_RS06630;Dbxref=GenBank:WP_025302211.1;Name=WP_025302211.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004938734.1;locus_tag=IY40_RS06630;product=hypothetical protein;protein_id=WP_025302211.1;transl_table=11 NZ_JPQY01000009.1 RefSeq gene 162259 163077 . + . ID=gene-IY40_RS06635;Name=IY40_RS06635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS06635;old_locus_tag=IY40_06740 NZ_JPQY01000009.1 Protein Homology CDS 162259 163077 . + 0 ID=cds-WP_038630232.1;Parent=gene-IY40_RS06635;Dbxref=GenBank:WP_038630232.1;Name=WP_038630232.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019454608.1;locus_tag=IY40_RS06635;product=fimbrial protein;protein_id=WP_038630232.1;transl_table=11 NZ_JPQY01000009.1 RefSeq gene 163097 163588 . + . ID=gene-IY40_RS06640;Name=IY40_RS06640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS06640;old_locus_tag=IY40_06745 NZ_JPQY01000009.1 Protein Homology CDS 163097 163588 . + 0 ID=cds-WP_225735588.1;Parent=gene-IY40_RS06640;Dbxref=GenBank:WP_225735588.1;Name=WP_225735588.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015377271.1;locus_tag=IY40_RS06640;product=fimbrial protein;protein_id=WP_225735588.1;transl_table=11 NZ_JPQY01000009.1 RefSeq gene 163686 164891 . - . ID=gene-IY40_RS06645;Name=IY40_RS06645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS06645;old_locus_tag=IY40_06750 NZ_JPQY01000009.1 Protein Homology CDS 163686 164891 . - 0 ID=cds-WP_043137823.1;Parent=gene-IY40_RS06645;Dbxref=GenBank:WP_043137823.1;Name=WP_043137823.1;Ontology_term=GO:0030655,GO:0008800;gbkey=CDS;go_function=beta-lactamase activity|0008800||IEA;go_process=beta-lactam antibiotic catabolic process|0030655||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012413598.1;locus_tag=IY40_RS06645;product=serine hydrolase;protein_id=WP_043137823.1;transl_table=11 NZ_JPQY01000009.1 RefSeq gene 165358 166725 . + . ID=gene-IY40_RS06650;Name=IY40_RS06650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS06650;old_locus_tag=IY40_06755 NZ_JPQY01000009.1 Protein Homology CDS 165358 166725 . + 0 ID=cds-WP_043137826.1;Parent=gene-IY40_RS06650;Dbxref=GenBank:WP_043137826.1;Name=WP_043137826.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012006060.1;locus_tag=IY40_RS06650;product=pyridoxal-phosphate dependent enzyme;protein_id=WP_043137826.1;transl_table=11 NZ_JPQY01000009.1 RefSeq gene 166738 167883 . + . ID=gene-IY40_RS06655;Name=IY40_RS06655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS06655;old_locus_tag=IY40_06760 NZ_JPQY01000009.1 Protein Homology CDS 166738 167883 . + 0 ID=cds-WP_025302206.1;Parent=gene-IY40_RS06655;Dbxref=GenBank:WP_025302206.1;Name=WP_025302206.1;Ontology_term=GO:0019346,GO:0016846,GO:0030170;gbkey=CDS;go_function=carbon-sulfur lyase activity|0016846||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=transsulfuration|0019346||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006324451.1;locus_tag=IY40_RS06655;product=trans-sulfuration enzyme family protein;protein_id=WP_025302206.1;transl_table=11 NZ_JPQY01000009.1 RefSeq gene 167943 168965 . - . ID=gene-IY40_RS06660;Name=IY40_RS06660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS06660;old_locus_tag=IY40_06765 NZ_JPQY01000009.1 Protein Homology CDS 167943 168965 . - 0 ID=cds-WP_043137830.1;Parent=gene-IY40_RS06660;Dbxref=GenBank:WP_043137830.1;Name=WP_043137830.1;Ontology_term=GO:0005506,GO:0046872,GO:0051213;gbkey=CDS;go_function=iron ion binding|0005506||IEA,metal ion binding|0046872||IEA,dioxygenase activity|0051213||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006320916.1;locus_tag=IY40_RS06660;product=isopenicillin N synthase family dioxygenase;protein_id=WP_043137830.1;transl_table=11 NZ_JPQY01000009.1 RefSeq gene 168910 169146 . - . ID=gene-IY40_RS26305;Name=IY40_RS26305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS26305 NZ_JPQY01000009.1 GeneMarkS-2+ CDS 168910 169146 . - 0 ID=cds-WP_072008235.1;Parent=gene-IY40_RS26305;Dbxref=GenBank:WP_072008235.1;Name=WP_072008235.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IY40_RS26305;product=hypothetical protein;protein_id=WP_072008235.1;transl_table=11 NZ_JPQY01000009.1 RefSeq gene 169254 169910 . + . ID=gene-IY40_RS06665;Name=IY40_RS06665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS06665;old_locus_tag=IY40_06770 NZ_JPQY01000009.1 Protein Homology CDS 169254 169910 . + 0 ID=cds-WP_025302204.1;Parent=gene-IY40_RS06665;Dbxref=GenBank:WP_025302204.1;Name=WP_025302204.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006320917.1;locus_tag=IY40_RS06665;product=HAD family hydrolase;protein_id=WP_025302204.1;transl_table=11 NZ_JPQY01000009.1 RefSeq gene 170000 170620 . + . ID=gene-IY40_RS06670;Name=IY40_RS06670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS06670;old_locus_tag=IY40_06775 NZ_JPQY01000009.1 Protein Homology CDS 170000 170620 . + 0 ID=cds-WP_043137833.1;Parent=gene-IY40_RS06670;Dbxref=GenBank:WP_043137833.1;Name=WP_043137833.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017892217.1;locus_tag=IY40_RS06670;product=glutathione S-transferase family protein;protein_id=WP_043137833.1;transl_table=11 NZ_JPQY01000009.1 RefSeq gene 170634 171734 . - . ID=gene-IY40_RS06675;Name=IY40_RS06675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS06675;old_locus_tag=IY40_06780 NZ_JPQY01000009.1 Protein Homology CDS 170634 171734 . - 0 ID=cds-WP_043137837.1;Parent=gene-IY40_RS06675;Dbxref=GenBank:WP_043137837.1;Name=WP_043137837.1;Ontology_term=GO:0016901,GO:0070968;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C quinone or similar compound as acceptor|0016901||IEA,pyrroloquinoline quinone binding|0070968||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004938764.1;locus_tag=IY40_RS06675;product=PQQ-dependent sugar dehydrogenase;protein_id=WP_043137837.1;transl_table=11 NZ_JPQY01000009.1 RefSeq gene 171865 172284 . + . ID=gene-IY40_RS06680;Name=IY40_RS06680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS06680;old_locus_tag=IY40_06785 NZ_JPQY01000009.1 Protein Homology CDS 171865 172284 . + 0 ID=cds-WP_025302201.1;Parent=gene-IY40_RS06680;Dbxref=GenBank:WP_025302201.1;Name=WP_025302201.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004938770.1;locus_tag=IY40_RS06680;product=GNAT family N-acetyltransferase;protein_id=WP_025302201.1;transl_table=11 NZ_JPQY01000009.1 RefSeq gene 172296 173279 . + . ID=gene-IY40_RS06685;Name=IY40_RS06685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS06685;old_locus_tag=IY40_06790 NZ_JPQY01000009.1 Protein Homology CDS 172296 173279 . + 0 ID=cds-WP_043137840.1;Parent=gene-IY40_RS06685;Dbxref=GenBank:WP_043137840.1;Name=WP_043137840.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004942465.1;locus_tag=IY40_RS06685;product=magnesium and cobalt transport protein CorA;protein_id=WP_043137840.1;transl_table=11 NZ_JPQY01000009.1 RefSeq gene 173354 173602 . - . ID=gene-IY40_RS26465;Name=IY40_RS26465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS26465 NZ_JPQY01000009.1 GeneMarkS-2+ CDS 173354 173602 . - 0 ID=cds-WP_235211364.1;Parent=gene-IY40_RS26465;Dbxref=GenBank:WP_235211364.1;Name=WP_235211364.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IY40_RS26465;product=carbon-nitrogen hydrolase family protein;protein_id=WP_235211364.1;transl_table=11 NZ_JPQY01000009.1 RefSeq gene 173621 174166 . - . ID=gene-IY40_RS06690;Name=IY40_RS06690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS06690;old_locus_tag=IY40_06795 NZ_JPQY01000009.1 Protein Homology CDS 173621 174166 . - 0 ID=cds-WP_235211365.1;Parent=gene-IY40_RS06690;Dbxref=GenBank:WP_235211365.1;Name=WP_235211365.1;Ontology_term=GO:0008152;gbkey=CDS;go_process=metabolic process|0008152||IEA;inference=COORDINATES: protein motif:HMM:NF012993.6;locus_tag=IY40_RS06690;product=nitrilase-related carbon-nitrogen hydrolase;protein_id=WP_235211365.1;transl_table=11 NZ_JPQY01000009.1 RefSeq gene 174163 175590 . - . ID=gene-IY40_RS06695;Name=IY40_RS06695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS06695;old_locus_tag=IY40_06800 NZ_JPQY01000009.1 Protein Homology CDS 174163 175590 . - 0 ID=cds-WP_043137843.1;Parent=gene-IY40_RS06695;Dbxref=GenBank:WP_043137843.1;Name=WP_043137843.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016928395.1;locus_tag=IY40_RS06695;product=purine-cytosine permease family protein;protein_id=WP_043137843.1;transl_table=11 NZ_JPQY01000009.1 RefSeq gene 175607 176992 . - . ID=gene-IY40_RS06700;Name=IY40_RS06700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS06700;old_locus_tag=IY40_06805 NZ_JPQY01000009.1 Protein Homology CDS 175607 176992 . - 0 ID=cds-WP_025302197.1;Parent=gene-IY40_RS06700;Dbxref=GenBank:WP_025302197.1;Name=WP_025302197.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019454362.1;locus_tag=IY40_RS06700;product=sodium:solute symporter family protein;protein_id=WP_025302197.1;transl_table=11 NZ_JPQY01000009.1 RefSeq gene 177070 178002 . - . ID=gene-IY40_RS06705;Name=speB;gbkey=Gene;gene=speB;gene_biotype=protein_coding;locus_tag=IY40_RS06705;old_locus_tag=IY40_06810 NZ_JPQY01000009.1 Protein Homology CDS 177070 178002 . - 0 ID=cds-WP_043137848.1;Parent=gene-IY40_RS06705;Dbxref=GenBank:WP_043137848.1;Name=WP_043137848.1;Ontology_term=GO:0008295,GO:0008783;gbkey=CDS;gene=speB;go_function=agmatinase activity|0008783||IEA;go_process=spermidine biosynthetic process|0008295||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016928397.1;locus_tag=IY40_RS06705;product=agmatinase;protein_id=WP_043137848.1;transl_table=11 NZ_JPQY01000009.1 RefSeq gene 178252 179157 . + . ID=gene-IY40_RS06710;Name=IY40_RS06710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS06710;old_locus_tag=IY40_06815 NZ_JPQY01000009.1 Protein Homology CDS 178252 179157 . + 0 ID=cds-WP_025302195.1;Parent=gene-IY40_RS06710;Dbxref=GenBank:WP_025302195.1;Name=WP_025302195.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016928398.1;locus_tag=IY40_RS06710;product=LysR family transcriptional regulator;protein_id=WP_025302195.1;transl_table=11 NZ_JPQY01000009.1 RefSeq gene 179148 180338 . - . ID=gene-IY40_RS06715;Name=IY40_RS06715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS06715;old_locus_tag=IY40_06820 NZ_JPQY01000009.1 Protein Homology CDS 179148 180338 . - 0 ID=cds-WP_025302194.1;Parent=gene-IY40_RS06715;Dbxref=GenBank:WP_025302194.1;Name=WP_025302194.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004938785.1;locus_tag=IY40_RS06715;product=MFS transporter;protein_id=WP_025302194.1;transl_table=11 NZ_JPQY01000009.1 RefSeq gene 180476 181360 . + . ID=gene-IY40_RS06720;Name=IY40_RS06720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS06720;old_locus_tag=IY40_06825 NZ_JPQY01000009.1 Protein Homology CDS 180476 181360 . + 0 ID=cds-WP_043137856.1;Parent=gene-IY40_RS06720;Dbxref=GenBank:WP_043137856.1;Name=WP_043137856.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016928400.1;locus_tag=IY40_RS06720;product=LysR family transcriptional regulator;protein_id=WP_043137856.1;transl_table=11 NZ_JPQY01000009.1 RefSeq gene 181376 182200 . - . ID=gene-IY40_RS06725;Name=IY40_RS06725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS06725;old_locus_tag=IY40_06830 NZ_JPQY01000009.1 Protein Homology CDS 181376 182200 . - 0 ID=cds-WP_043137858.1;Parent=gene-IY40_RS06725;Dbxref=GenBank:WP_043137858.1;Name=WP_043137858.1;Ontology_term=GO:0016491,GO:0051287;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006324445.1;locus_tag=IY40_RS06725;product=SDR family oxidoreductase;protein_id=WP_043137858.1;transl_table=11 NZ_JPQY01000009.1 RefSeq gene 182430 182477 . + . ID=gene-IY40_RS25885;Name=hisL;gbkey=Gene;gene=hisL;gene_biotype=protein_coding;locus_tag=IY40_RS25885 NZ_JPQY01000009.1 Protein Homology CDS 182430 182477 . + 0 ID=cds-WP_100396937.1;Parent=gene-IY40_RS25885;Dbxref=GenBank:WP_100396937.1;Name=WP_100396937.1;Ontology_term=GO:0000105;gbkey=CDS;gene=hisL;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310846.1;locus_tag=IY40_RS25885;product=his operon leader peptide;protein_id=WP_100396937.1;transl_table=11 NZ_JPQY01000009.1 cmsearch sequence_feature 182453 182579 . + . ID=id-NZ_JPQY01000009.1:182453..182579;Dbxref=RFAM:RF00514;Note=His leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.5 NZ_JPQY01000009.1 RefSeq gene 182651 183550 . + . ID=gene-IY40_RS06730;Name=hisG;gbkey=Gene;gene=hisG;gene_biotype=protein_coding;locus_tag=IY40_RS06730;old_locus_tag=IY40_06835 NZ_JPQY01000009.1 Protein Homology CDS 182651 183550 . + 0 ID=cds-WP_015377256.1;Parent=gene-IY40_RS06730;Dbxref=GenBank:WP_015377256.1;Name=WP_015377256.1;Ontology_term=GO:0000105,GO:0003879,GO:0005737;gbkey=CDS;gene=hisG;go_component=cytoplasm|0005737||IEA;go_function=ATP phosphoribosyltransferase activity|0003879||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005128078.1;locus_tag=IY40_RS06730;product=ATP phosphoribosyltransferase;protein_id=WP_015377256.1;transl_table=11 NZ_JPQY01000009.1 RefSeq gene 183555 184862 . + . ID=gene-IY40_RS06735;Name=hisD;gbkey=Gene;gene=hisD;gene_biotype=protein_coding;locus_tag=IY40_RS06735;old_locus_tag=IY40_06840 NZ_JPQY01000009.1 Protein Homology CDS 183555 184862 . + 0 ID=cds-WP_043137860.1;Parent=gene-IY40_RS06735;Dbxref=GenBank:WP_043137860.1;Name=WP_043137860.1;Ontology_term=GO:0000105,GO:0004399,GO:0046872,GO:0051287;gbkey=CDS;gene=hisD;go_function=histidinol dehydrogenase activity|0004399||IEA,metal ion binding|0046872||IEA,NAD binding|0051287||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006324444.1;locus_tag=IY40_RS06735;product=histidinol dehydrogenase;protein_id=WP_043137860.1;transl_table=11 NZ_JPQY01000009.1 RefSeq gene 184859 185947 . + . ID=gene-IY40_RS06740;Name=hisC;gbkey=Gene;gene=hisC;gene_biotype=protein_coding;locus_tag=IY40_RS06740;old_locus_tag=IY40_06845 NZ_JPQY01000009.1 Protein Homology CDS 184859 185947 . + 0 ID=cds-WP_043137863.1;Parent=gene-IY40_RS06740;Dbxref=GenBank:WP_043137863.1;Name=WP_043137863.1;Ontology_term=GO:0000105,GO:0004400;gbkey=CDS;gene=hisC;go_function=histidinol-phosphate transaminase activity|0004400||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004938799.1;locus_tag=IY40_RS06740;product=histidinol-phosphate transaminase;protein_id=WP_043137863.1;transl_table=11 NZ_JPQY01000009.1 RefSeq gene 185944 187011 . + . ID=gene-IY40_RS06745;Name=hisB;gbkey=Gene;gene=hisB;gene_biotype=protein_coding;locus_tag=IY40_RS06745;old_locus_tag=IY40_06850 NZ_JPQY01000009.1 Protein Homology CDS 185944 187011 . + 0 ID=cds-WP_015377254.1;Parent=gene-IY40_RS06745;Dbxref=GenBank:WP_015377254.1;Name=WP_015377254.1;Ontology_term=GO:0000105,GO:0004401,GO:0004424;gbkey=CDS;gene=hisB;go_function=histidinol-phosphatase activity|0004401||IEA,imidazoleglycerol-phosphate dehydratase activity|0004424||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211893.1;locus_tag=IY40_RS06745;product=bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB;protein_id=WP_015377254.1;transl_table=11 NZ_JPQY01000009.1 RefSeq gene 187011 187601 . + . ID=gene-IY40_RS06750;Name=hisH;gbkey=Gene;gene=hisH;gene_biotype=protein_coding;locus_tag=IY40_RS06750;old_locus_tag=IY40_06855 NZ_JPQY01000009.1 Protein Homology CDS 187011 187601 . + 0 ID=cds-WP_025302189.1;Parent=gene-IY40_RS06750;Dbxref=GenBank:WP_025302189.1;Name=WP_025302189.1;Ontology_term=GO:0000105,GO:0000107;gbkey=CDS;gene=hisH;go_function=imidazoleglycerol-phosphate synthase activity|0000107||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002224715.1;locus_tag=IY40_RS06750;product=imidazole glycerol phosphate synthase subunit HisH;protein_id=WP_025302189.1;transl_table=11 NZ_JPQY01000009.1 RefSeq gene 187607 188344 . + . ID=gene-IY40_RS06755;Name=hisA;gbkey=Gene;gene=hisA;gene_biotype=protein_coding;locus_tag=IY40_RS06755;old_locus_tag=IY40_06860 NZ_JPQY01000009.1 Protein Homology CDS 187607 188344 . + 0 ID=cds-WP_025302188.1;Parent=gene-IY40_RS06755;Dbxref=GenBank:WP_025302188.1;Name=WP_025302188.1;Ontology_term=GO:0000105,GO:0003949;gbkey=CDS;gene=hisA;go_function=1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity|0003949||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014884471.1;locus_tag=IY40_RS06755;product=1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase;protein_id=WP_025302188.1;transl_table=11 NZ_JPQY01000009.1 RefSeq gene 188326 189102 . + . ID=gene-IY40_RS06760;Name=hisF;gbkey=Gene;gene=hisF;gene_biotype=protein_coding;locus_tag=IY40_RS06760;old_locus_tag=IY40_06865 NZ_JPQY01000009.1 Protein Homology CDS 188326 189102 . + 0 ID=cds-WP_033637764.1;Parent=gene-IY40_RS06760;Dbxref=GenBank:WP_033637764.1;Name=WP_033637764.1;Ontology_term=GO:0000105,GO:0000107;gbkey=CDS;gene=hisF;go_function=imidazoleglycerol-phosphate synthase activity|0000107||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227842.1;locus_tag=IY40_RS06760;product=imidazole glycerol phosphate synthase subunit HisF;protein_id=WP_033637764.1;transl_table=11 NZ_JPQY01000009.1 RefSeq gene 189096 189716 . + . ID=gene-IY40_RS06765;Name=hisIE;gbkey=Gene;gene=hisIE;gene_biotype=protein_coding;locus_tag=IY40_RS06765;old_locus_tag=IY40_06870 NZ_JPQY01000009.1 Protein Homology CDS 189096 189716 . + 0 ID=cds-WP_043137867.1;Parent=gene-IY40_RS06765;Dbxref=GenBank:WP_043137867.1;Name=WP_043137867.1;Ontology_term=GO:0000105,GO:0004635,GO:0004636;gbkey=CDS;gene=hisIE;go_function=phosphoribosyl-AMP cyclohydrolase activity|0004635||IEA,phosphoribosyl-ATP diphosphatase activity|0004636||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004938812.1;locus_tag=IY40_RS06765;product=bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE;protein_id=WP_043137867.1;transl_table=11 NZ_JPQY01000009.1 RefSeq gene 189790 191196 . - . ID=gene-IY40_RS06770;Name=gndA;gbkey=Gene;gene=gndA;gene_biotype=protein_coding;locus_tag=IY40_RS06770;old_locus_tag=IY40_06875 NZ_JPQY01000009.1 Protein Homology CDS 189790 191196 . - 0 ID=cds-WP_025302186.1;Parent=gene-IY40_RS06770;Dbxref=GenBank:WP_025302186.1;Name=WP_025302186.1;Ontology_term=GO:0006098,GO:0004616,GO:0050661;gbkey=CDS;gene=gndA;go_function=phosphogluconate dehydrogenase (decarboxylating) activity|0004616||IEA,NADP binding|0050661||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004571305.1;locus_tag=IY40_RS06770;product=NADP-dependent phosphogluconate dehydrogenase;protein_id=WP_025302186.1;transl_table=11 NZ_JPQY01000009.1 RefSeq gene 191447 192271 . - . ID=gene-IY40_RS06775;Name=IY40_RS06775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS06775;old_locus_tag=IY40_06880 NZ_JPQY01000009.1 Protein Homology CDS 191447 192271 . - 0 ID=cds-WP_043137883.1;Parent=gene-IY40_RS06775;Dbxref=GenBank:WP_043137883.1;Name=WP_043137883.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015689706.1;locus_tag=IY40_RS06775;product=glycosyltransferase;protein_id=WP_043137883.1;transl_table=11 NZ_JPQY01000009.1 RefSeq gene 192286 193212 . - . ID=gene-IY40_RS06780;Name=IY40_RS06780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS06780;old_locus_tag=IY40_06885 NZ_JPQY01000009.1 Protein Homology CDS 192286 193212 . - 0 ID=cds-WP_043137870.1;Parent=gene-IY40_RS06780;Dbxref=GenBank:WP_043137870.1;Name=WP_043137870.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015689705.1;locus_tag=IY40_RS06780;product=glycosyltransferase;protein_id=WP_043137870.1;transl_table=11 NZ_JPQY01000009.1 RefSeq gene 193363 193923 . - . ID=gene-IY40_RS06785;Name=IY40_RS06785;end_range=193923,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS06785;old_locus_tag=IY40_06890;partial=true NZ_JPQY01000009.1 GeneMarkS-2+ CDS 193363 193923 . - 0 ID=cds-WP_235211366.1;Parent=gene-IY40_RS06785;Dbxref=GenBank:WP_235211366.1;Name=WP_235211366.1;end_range=193923,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IY40_RS06785;partial=true;product=hypothetical protein;protein_id=WP_235211366.1;transl_table=11 ##sequence-region NZ_JPQY01000010.1 1 232875 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=615 NZ_JPQY01000010.1 RefSeq region 1 232875 . + . ID=NZ_JPQY01000010.1:1..232875;Dbxref=taxon:615;collected-by=Mahloro H. Serepa%3B Vincent M. Gray;collection-date=2013-04-11;country=South Africa: North West Province;gbkey=Src;genome=genomic;identified-by=Mahloro H. Serepa%3B Vincent M. Gray;isolation-source=entomopathogenic nematode Oscheius sp. MCB living in soil;mol_type=genomic DNA;nat-host=Oscheius sp. MCB;strain=MCB NZ_JPQY01000010.1 RefSeq gene 268 1722 . + . ID=gene-IY40_RS06790;Name=IY40_RS06790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS06790;old_locus_tag=IY40_06895 NZ_JPQY01000010.1 Protein Homology CDS 268 1722 . + 0 ID=cds-WP_043137918.1;Parent=gene-IY40_RS06790;Dbxref=GenBank:WP_043137918.1;Name=WP_043137918.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004941617.1;locus_tag=IY40_RS06790;product=SIR2 family protein;protein_id=WP_043137918.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 1719 2210 . + . ID=gene-IY40_RS06795;Name=IY40_RS06795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS06795;old_locus_tag=IY40_06900 NZ_JPQY01000010.1 Protein Homology CDS 1719 2210 . + 0 ID=cds-WP_043137921.1;Parent=gene-IY40_RS06795;Dbxref=GenBank:WP_043137921.1;Name=WP_043137921.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004941616.1;locus_tag=IY40_RS06795;product=TIR domain-containing protein;protein_id=WP_043137921.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 2276 3088 . - . ID=gene-IY40_RS06800;Name=pstB;gbkey=Gene;gene=pstB;gene_biotype=protein_coding;locus_tag=IY40_RS06800;old_locus_tag=IY40_06905 NZ_JPQY01000010.1 Protein Homology CDS 2276 3088 . - 0 ID=cds-WP_019452422.1;Parent=gene-IY40_RS06800;Dbxref=GenBank:WP_019452422.1;Name=WP_019452422.1;Ontology_term=GO:0006817,GO:0005524,GO:0015415,GO:0009898,GO:0055052;gbkey=CDS;gene=pstB;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled phosphate ion transmembrane transporter activity|0015415||IEA;go_process=phosphate ion transport|0006817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016585461.1;locus_tag=IY40_RS06800;product=phosphate ABC transporter ATP-binding protein PstB;protein_id=WP_019452422.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 3117 4766 . - . ID=gene-IY40_RS06805;Name=pstA;gbkey=Gene;gene=pstA;gene_biotype=protein_coding;locus_tag=IY40_RS06805;old_locus_tag=IY40_06910 NZ_JPQY01000010.1 Protein Homology CDS 3117 4766 . - 0 ID=cds-WP_043137925.1;Parent=gene-IY40_RS06805;Dbxref=GenBank:WP_043137925.1;Name=WP_043137925.1;Ontology_term=GO:0006817,GO:0015415,GO:0005886,GO:0055052;gbkey=CDS;gene=pstA;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled phosphate ion transmembrane transporter activity|0015415||IEA;go_process=phosphate ion transport|0006817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004951919.1;locus_tag=IY40_RS06805;product=phosphate ABC transporter permease PstA;protein_id=WP_043137925.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 4763 6934 . - . ID=gene-IY40_RS06810;Name=IY40_RS06810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS06810;old_locus_tag=IY40_06915 NZ_JPQY01000010.1 Protein Homology CDS 4763 6934 . - 0 ID=cds-WP_043137929.1;Parent=gene-IY40_RS06810;Dbxref=GenBank:WP_043137929.1;Name=WP_043137929.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013814090.1;locus_tag=IY40_RS06810;product=ABC transporter permease subunit;protein_id=WP_043137929.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 7331 9394 . + . ID=gene-IY40_RS06815;Name=ppk1;gbkey=Gene;gene=ppk1;gene_biotype=protein_coding;locus_tag=IY40_RS06815;old_locus_tag=IY40_06920 NZ_JPQY01000010.1 Protein Homology CDS 7331 9394 . + 0 ID=cds-WP_043137932.1;Parent=gene-IY40_RS06815;Dbxref=GenBank:WP_043137932.1;Name=WP_043137932.1;Ontology_term=GO:0006799,GO:0008976,GO:0009358;gbkey=CDS;gene=ppk1;go_component=polyphosphate kinase complex|0009358||IEA;go_function=polyphosphate kinase activity|0008976||IEA;go_process=polyphosphate biosynthetic process|0006799||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004707808.1;locus_tag=IY40_RS06815;product=polyphosphate kinase 1;protein_id=WP_043137932.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 9405 10955 . + . ID=gene-IY40_RS06820;Name=ppx;gbkey=Gene;gene=ppx;gene_biotype=protein_coding;locus_tag=IY40_RS06820;old_locus_tag=IY40_06925 NZ_JPQY01000010.1 Protein Homology CDS 9405 10955 . + 0 ID=cds-WP_043137936.1;Parent=gene-IY40_RS06820;Dbxref=GenBank:WP_043137936.1;Name=WP_043137936.1;Ontology_term=GO:0006798,GO:0000287,GO:0004309;gbkey=CDS;gene=ppx;go_function=magnesium ion binding|0000287||IEA,exopolyphosphatase activity|0004309||IEA;go_process=polyphosphate catabolic process|0006798||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006316924.1;locus_tag=IY40_RS06820;product=exopolyphosphatase;protein_id=WP_043137936.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 11137 11319 . + . ID=gene-IY40_RS06825;Name=IY40_RS06825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS06825;old_locus_tag=IY40_06930 NZ_JPQY01000010.1 Protein Homology CDS 11137 11319 . + 0 ID=cds-WP_004941600.1;Parent=gene-IY40_RS06825;Dbxref=GenBank:WP_004941600.1;Name=WP_004941600.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004941600.1;locus_tag=IY40_RS06825;product=YfgG family protein;protein_id=WP_004941600.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 11423 12856 . + . ID=gene-IY40_RS06830;Name=mgtE;gbkey=Gene;gene=mgtE;gene_biotype=protein_coding;locus_tag=IY40_RS06830;old_locus_tag=IY40_06935 NZ_JPQY01000010.1 Protein Homology CDS 11423 12856 . + 0 ID=cds-WP_025303851.1;Parent=gene-IY40_RS06830;Dbxref=GenBank:WP_025303851.1;Name=WP_025303851.1;Ontology_term=GO:0015693,GO:0015095,GO:0016020;gbkey=CDS;gene=mgtE;go_component=membrane|0016020||IEA;go_function=magnesium ion transmembrane transporter activity|0015095||IEA;go_process=magnesium ion transport|0015693||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004941597.1;locus_tag=IY40_RS06830;product=magnesium transporter;protein_id=WP_025303851.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 13042 16371 . + . ID=gene-IY40_RS06835;Name=IY40_RS06835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS06835;old_locus_tag=IY40_06940 NZ_JPQY01000010.1 Protein Homology CDS 13042 16371 . + 0 ID=cds-WP_043137944.1;Parent=gene-IY40_RS06835;Dbxref=GenBank:WP_043137944.1;Name=WP_043137944.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015378730.1;locus_tag=IY40_RS06835;product=diguanylate cyclase;protein_id=WP_043137944.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 16565 16918 . + . ID=gene-IY40_RS06840;Name=IY40_RS06840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS06840;old_locus_tag=IY40_06945 NZ_JPQY01000010.1 Protein Homology CDS 16565 16918 . + 0 ID=cds-WP_025303853.1;Parent=gene-IY40_RS06840;Dbxref=GenBank:WP_025303853.1;Name=WP_025303853.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004941591.1;locus_tag=IY40_RS06840;product=DNA-binding protein;protein_id=WP_025303853.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 16925 18415 . - . ID=gene-IY40_RS06845;Name=alkA;gbkey=Gene;gene=alkA;gene_biotype=protein_coding;locus_tag=IY40_RS06845;old_locus_tag=IY40_06950 NZ_JPQY01000010.1 Protein Homology CDS 16925 18415 . - 0 ID=cds-WP_043137949.1;Parent=gene-IY40_RS06845;Dbxref=GenBank:WP_043137949.1;Name=WP_043137949.1;Ontology_term=GO:0006281,GO:0003824;gbkey=CDS;gene=alkA;go_function=catalytic activity|0003824||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016926716.1;locus_tag=IY40_RS06845;product=DNA-3-methyladenine glycosylase 2;protein_id=WP_043137949.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 18580 19932 . + . ID=gene-IY40_RS06850;Name=yegD;gbkey=Gene;gene=yegD;gene_biotype=protein_coding;locus_tag=IY40_RS06850;old_locus_tag=IY40_06955 NZ_JPQY01000010.1 Protein Homology CDS 18580 19932 . + 0 ID=cds-WP_025303855.1;Parent=gene-IY40_RS06850;Dbxref=GenBank:WP_025303855.1;Name=WP_025303855.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;gene=yegD;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004717948.1;locus_tag=IY40_RS06850;product=molecular chaperone;protein_id=WP_025303855.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 19984 20550 . + . ID=gene-IY40_RS06855;Name=IY40_RS06855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS06855;old_locus_tag=IY40_06960 NZ_JPQY01000010.1 Protein Homology CDS 19984 20550 . + 0 ID=cds-WP_043137952.1;Parent=gene-IY40_RS06855;Dbxref=GenBank:WP_043137952.1;Name=WP_043137952.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016926712.1;locus_tag=IY40_RS06855;product=GNAT family N-acetyltransferase;protein_id=WP_043137952.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 20547 21164 . - . ID=gene-IY40_RS06860;Name=IY40_RS06860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS06860;old_locus_tag=IY40_06965 NZ_JPQY01000010.1 Protein Homology CDS 20547 21164 . - 0 ID=cds-WP_025303857.1;Parent=gene-IY40_RS06860;Dbxref=GenBank:WP_025303857.1;Name=WP_025303857.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006318262.1;locus_tag=IY40_RS06860;product=pyridoxamine 5'-phosphate oxidase family protein;protein_id=WP_025303857.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 21233 22186 . - . ID=gene-IY40_RS06865;Name=IY40_RS06865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS06865;old_locus_tag=IY40_06970 NZ_JPQY01000010.1 Protein Homology CDS 21233 22186 . - 0 ID=cds-WP_043137956.1;Parent=gene-IY40_RS06865;Dbxref=GenBank:WP_043137956.1;Name=WP_043137956.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015378734.1;locus_tag=IY40_RS06865;product=aldo/keto reductase;protein_id=WP_043137956.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 22459 23712 . + . ID=gene-IY40_RS06870;Name=IY40_RS06870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS06870;old_locus_tag=IY40_06975 NZ_JPQY01000010.1 Protein Homology CDS 22459 23712 . + 0 ID=cds-WP_025303859.1;Parent=gene-IY40_RS06870;Dbxref=GenBank:WP_025303859.1;Name=WP_025303859.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016926709.1;locus_tag=IY40_RS06870;product=MdtA/MuxA family multidrug efflux RND transporter periplasmic adaptor subunit;protein_id=WP_025303859.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 23712 26831 . + . ID=gene-IY40_RS06875;Name=IY40_RS06875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS06875;old_locus_tag=IY40_06980 NZ_JPQY01000010.1 Protein Homology CDS 23712 26831 . + 0 ID=cds-WP_025303860.1;Parent=gene-IY40_RS06875;Dbxref=GenBank:WP_025303860.1;Name=WP_025303860.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012146262.1;locus_tag=IY40_RS06875;product=MdtB/MuxB family multidrug efflux RND transporter permease subunit;protein_id=WP_025303860.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 26828 29908 . + . ID=gene-IY40_RS06880;Name=mdtC;gbkey=Gene;gene=mdtC;gene_biotype=protein_coding;locus_tag=IY40_RS06880;old_locus_tag=IY40_06985 NZ_JPQY01000010.1 Protein Homology CDS 26828 29908 . + 0 ID=cds-WP_043137960.1;Parent=gene-IY40_RS06880;Dbxref=GenBank:WP_043137960.1;Name=WP_043137960.1;Ontology_term=GO:0055085;gbkey=CDS;gene=mdtC;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006318255.1;locus_tag=IY40_RS06880;product=multidrug efflux RND transporter permease subunit MdtC;protein_id=WP_043137960.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 29919 31349 . + . ID=gene-IY40_RS06885;Name=mdtD;gbkey=Gene;gene=mdtD;gene_biotype=protein_coding;locus_tag=IY40_RS06885;old_locus_tag=IY40_06990 NZ_JPQY01000010.1 Protein Homology CDS 29919 31349 . + 0 ID=cds-WP_043137964.1;Parent=gene-IY40_RS06885;Dbxref=GenBank:WP_043137964.1;Name=WP_043137964.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=mdtD;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016926706.1;locus_tag=IY40_RS06885;product=MFS transporter;protein_id=WP_043137964.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 31346 32728 . + . ID=gene-IY40_RS06890;Name=baeS;gbkey=Gene;gene=baeS;gene_biotype=protein_coding;locus_tag=IY40_RS06890;old_locus_tag=IY40_06995 NZ_JPQY01000010.1 Protein Homology CDS 31346 32728 . + 0 ID=cds-WP_043137967.1;Parent=gene-IY40_RS06890;Dbxref=GenBank:WP_043137967.1;Name=WP_043137967.1;Ontology_term=GO:0007165,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=baeS;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004941570.1;locus_tag=IY40_RS06890;product=envelope stress sensor histidine kinase BaeS;protein_id=WP_043137967.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 32728 33444 . + . ID=gene-IY40_RS06895;Name=baeR;gbkey=Gene;gene=baeR;gene_biotype=protein_coding;locus_tag=IY40_RS06895;old_locus_tag=IY40_07000 NZ_JPQY01000010.1 Protein Homology CDS 32728 33444 . + 0 ID=cds-WP_004941568.1;Parent=gene-IY40_RS06895;Dbxref=GenBank:WP_004941568.1;Name=WP_004941568.1;Ontology_term=GO:0000160,GO:2000142,GO:0003700;gbkey=CDS;gene=baeR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription initiation|2000142||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004951961.1;locus_tag=IY40_RS06895;product=envelope stress response regulator BaeR;protein_id=WP_004941568.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 33452 33841 . - . ID=gene-IY40_RS06900;Name=IY40_RS06900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS06900;old_locus_tag=IY40_07005 NZ_JPQY01000010.1 Protein Homology CDS 33452 33841 . - 0 ID=cds-WP_043137970.1;Parent=gene-IY40_RS06900;Dbxref=GenBank:WP_043137970.1;Name=WP_043137970.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004941566.1;locus_tag=IY40_RS06900;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_043137970.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 33845 34108 . - . ID=gene-IY40_RS06905;Name=IY40_RS06905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS06905;old_locus_tag=IY40_07010 NZ_JPQY01000010.1 Protein Homology CDS 33845 34108 . - 0 ID=cds-WP_004941563.1;Parent=gene-IY40_RS06905;Dbxref=GenBank:WP_004941563.1;Name=WP_004941563.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004941563.1;locus_tag=IY40_RS06905;product=antitoxin;protein_id=WP_004941563.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 34446 34784 . + . ID=gene-IY40_RS06910;Name=IY40_RS06910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS06910;old_locus_tag=IY40_07015 NZ_JPQY01000010.1 Protein Homology CDS 34446 34784 . + 0 ID=cds-WP_016926703.1;Parent=gene-IY40_RS06910;Dbxref=GenBank:WP_016926703.1;Name=WP_016926703.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016926703.1;locus_tag=IY40_RS06910;product=YegP family protein;protein_id=WP_016926703.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 34963 36315 . + . ID=gene-IY40_RS06915;Name=trhP;gbkey=Gene;gene=trhP;gene_biotype=protein_coding;gene_synonym=yegQ;locus_tag=IY40_RS06915;old_locus_tag=IY40_07020 NZ_JPQY01000010.1 Protein Homology CDS 34963 36315 . + 0 ID=cds-WP_025303865.1;Parent=gene-IY40_RS06915;Dbxref=GenBank:WP_025303865.1;Name=WP_025303865.1;Ontology_term=GO:0006400;gbkey=CDS;gene=trhP;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004951966.1;locus_tag=IY40_RS06915;product=prephenate-dependent tRNA uridine(34) hydroxylase TrhP;protein_id=WP_025303865.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 36532 36753 . - . ID=gene-IY40_RS25890;Name=IY40_RS25890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS25890 NZ_JPQY01000010.1 GeneMarkS-2+ CDS 36532 36753 . - 0 ID=cds-WP_141998673.1;Parent=gene-IY40_RS25890;Dbxref=GenBank:WP_141998673.1;Name=WP_141998673.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IY40_RS25890;product=hypothetical protein;protein_id=WP_141998673.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 36783 37688 . + . ID=gene-IY40_RS06920;Name=yegS;gbkey=Gene;gene=yegS;gene_biotype=protein_coding;locus_tag=IY40_RS06920;old_locus_tag=IY40_07025 NZ_JPQY01000010.1 Protein Homology CDS 36783 37688 . + 0 ID=cds-WP_043137977.1;Parent=gene-IY40_RS06920;Dbxref=GenBank:WP_043137977.1;Name=WP_043137977.1;Ontology_term=GO:0001727,GO:0046872;gbkey=CDS;gene=yegS;go_function=lipid kinase activity|0001727||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016926701.1;locus_tag=IY40_RS06920;product=lipid kinase YegS;protein_id=WP_043137977.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 37857 39071 . + . ID=gene-IY40_RS06925;Name=manD;gbkey=Gene;gene=manD;gene_biotype=protein_coding;locus_tag=IY40_RS06925;old_locus_tag=IY40_07030 NZ_JPQY01000010.1 Protein Homology CDS 37857 39071 . + 0 ID=cds-WP_025303867.1;Parent=gene-IY40_RS06925;Dbxref=GenBank:WP_025303867.1;Name=WP_025303867.1;Ontology_term=GO:0016052,GO:0008927;gbkey=CDS;gene=manD;go_function=mannonate dehydratase activity|0008927||IEA;go_process=carbohydrate catabolic process|0016052||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001625315.1;locus_tag=IY40_RS06925;product=D-mannonate dehydratase ManD;protein_id=WP_025303867.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 39077 40093 . + . ID=gene-IY40_RS06930;Name=IY40_RS06930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS06930;old_locus_tag=IY40_07035 NZ_JPQY01000010.1 Protein Homology CDS 39077 40093 . + 0 ID=cds-WP_161781783.1;Parent=gene-IY40_RS06930;Dbxref=GenBank:WP_161781783.1;Name=WP_161781783.1;Ontology_term=GO:0008270,GO:0016491;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004941548.1;locus_tag=IY40_RS06930;product=Zn-dependent oxidoreductase;protein_id=WP_161781783.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 40185 41474 . + . ID=gene-IY40_RS06935;Name=IY40_RS06935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS06935;old_locus_tag=IY40_07040 NZ_JPQY01000010.1 Protein Homology CDS 40185 41474 . + 0 ID=cds-WP_025303869.1;Parent=gene-IY40_RS06935;Dbxref=GenBank:WP_025303869.1;Name=WP_025303869.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015378745.1;locus_tag=IY40_RS06935;product=MFS transporter;protein_id=WP_025303869.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 41527 43032 . + . ID=gene-IY40_RS06940;Name=IY40_RS06940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS06940;old_locus_tag=IY40_07045 NZ_JPQY01000010.1 Protein Homology CDS 41527 43032 . + 0 ID=cds-WP_043137986.1;Parent=gene-IY40_RS06940;Dbxref=GenBank:WP_043137986.1;Name=WP_043137986.1;Ontology_term=GO:0016616;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015378746.1;locus_tag=IY40_RS06940;product=mannitol dehydrogenase family protein;protein_id=WP_043137986.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 43013 44203 . + . ID=gene-IY40_RS06945;Name=IY40_RS06945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS06945;old_locus_tag=IY40_07050 NZ_JPQY01000010.1 Protein Homology CDS 43013 44203 . + 0 ID=cds-WP_043137992.1;Parent=gene-IY40_RS06945;Dbxref=GenBank:WP_043137992.1;Name=WP_043137992.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004941539.1;locus_tag=IY40_RS06945;product=MFS transporter;protein_id=WP_043137992.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 44302 44988 . + . ID=gene-IY40_RS06950;Name=IY40_RS06950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS06950;old_locus_tag=IY40_07055 NZ_JPQY01000010.1 Protein Homology CDS 44302 44988 . + 0 ID=cds-WP_025303872.1;Parent=gene-IY40_RS06950;Dbxref=GenBank:WP_025303872.1;Name=WP_025303872.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006327242.1;locus_tag=IY40_RS06950;product=GntR family transcriptional regulator;protein_id=WP_025303872.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 45195 46244 . + . ID=gene-IY40_RS06955;Name=fbaB;gbkey=Gene;gene=fbaB;gene_biotype=protein_coding;locus_tag=IY40_RS06955;old_locus_tag=IY40_07060 NZ_JPQY01000010.1 Protein Homology CDS 45195 46244 . + 0 ID=cds-WP_043137996.1;Parent=gene-IY40_RS06955;Dbxref=GenBank:WP_043137996.1;Name=WP_043137996.1;Ontology_term=GO:0004332;gbkey=CDS;gene=fbaB;go_function=fructose-bisphosphate aldolase activity|0004332||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006820796.1;locus_tag=IY40_RS06955;product=class I fructose-bisphosphate aldolase;protein_id=WP_043137996.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 46581 47108 . + . ID=gene-IY40_RS06960;Name=IY40_RS06960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS06960;old_locus_tag=IY40_07065 NZ_JPQY01000010.1 GeneMarkS-2+ CDS 46581 47108 . + 0 ID=cds-WP_025303874.1;Parent=gene-IY40_RS06960;Dbxref=GenBank:WP_025303874.1;Name=WP_025303874.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IY40_RS06960;product=hypothetical protein;protein_id=WP_025303874.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 47369 47917 . + . ID=gene-IY40_RS06965;Name=srlA;gbkey=Gene;gene=srlA;gene_biotype=protein_coding;locus_tag=IY40_RS06965;old_locus_tag=IY40_07070 NZ_JPQY01000010.1 Protein Homology CDS 47369 47917 . + 0 ID=cds-WP_004941528.1;Parent=gene-IY40_RS06965;Dbxref=GenBank:WP_004941528.1;Name=WP_004941528.1;Ontology_term=GO:0009401,GO:0015795;gbkey=CDS;gene=srlA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,sorbitol transmembrane transport|0015795||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004391259.1;locus_tag=IY40_RS06965;product=PTS glucitol/sorbitol transporter subunit IIC;protein_id=WP_004941528.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 47933 48913 . + . ID=gene-IY40_RS06970;Name=srlE;gbkey=Gene;gene=srlE;gene_biotype=protein_coding;locus_tag=IY40_RS06970;old_locus_tag=IY40_07075 NZ_JPQY01000010.1 Protein Homology CDS 47933 48913 . + 0 ID=cds-WP_025303875.1;Parent=gene-IY40_RS06970;Dbxref=GenBank:WP_025303875.1;Name=WP_025303875.1;Ontology_term=GO:0009401,GO:0015795,GO:0008982,GO:0016301;gbkey=CDS;gene=srlE;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA,kinase activity|0016301||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,sorbitol transmembrane transport|0015795||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017893655.1;locus_tag=IY40_RS06970;product=PTS glucitol/sorbitol transporter subunit IIB;protein_id=WP_025303875.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 48936 49298 . + . ID=gene-IY40_RS06975;Name=srlB;gbkey=Gene;gene=srlB;gene_biotype=protein_coding;gene_synonym=gutB;locus_tag=IY40_RS06975;old_locus_tag=IY40_07080 NZ_JPQY01000010.1 Protein Homology CDS 48936 49298 . + 0 ID=cds-WP_043138000.1;Parent=gene-IY40_RS06975;Dbxref=GenBank:WP_043138000.1;Name=WP_043138000.1;gbkey=CDS;gene=srlB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004941520.1;locus_tag=IY40_RS06975;product=PTS glucitol/sorbitol transporter subunit IIA;protein_id=WP_043138000.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 49309 50088 . + . ID=gene-IY40_RS06980;Name=srlD;gbkey=Gene;gene=srlD;gene_biotype=protein_coding;locus_tag=IY40_RS06980;old_locus_tag=IY40_07085 NZ_JPQY01000010.1 Protein Homology CDS 49309 50088 . + 0 ID=cds-WP_043138004.1;Parent=gene-IY40_RS06980;Dbxref=GenBank:WP_043138004.1;Name=WP_043138004.1;Ontology_term=GO:0016491;gbkey=CDS;gene=srlD;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019083696.1;locus_tag=IY40_RS06980;product=sorbitol-6-phosphate dehydrogenase;protein_id=WP_043138004.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 50135 50491 . + . ID=gene-IY40_RS06985;Name=gutM;gbkey=Gene;gene=gutM;gene_biotype=protein_coding;locus_tag=IY40_RS06985;old_locus_tag=IY40_07090 NZ_JPQY01000010.1 Protein Homology CDS 50135 50491 . + 0 ID=cds-WP_043138008.1;Parent=gene-IY40_RS06985;Dbxref=GenBank:WP_043138008.1;Name=WP_043138008.1;gbkey=CDS;gene=gutM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019452392.1;locus_tag=IY40_RS06985;product=transcriptional regulator GutM;protein_id=WP_043138008.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 50575 51348 . + . ID=gene-IY40_RS06990;Name=srlR;gbkey=Gene;gene=srlR;gene_biotype=protein_coding;gene_synonym=gutR;locus_tag=IY40_RS06990;old_locus_tag=IY40_07095 NZ_JPQY01000010.1 Protein Homology CDS 50575 51348 . + 0 ID=cds-WP_025303878.1;Parent=gene-IY40_RS06990;Dbxref=GenBank:WP_025303878.1;Name=WP_025303878.1;Ontology_term=GO:0045892,GO:0003700;gbkey=CDS;gene=srlR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015703249.1;locus_tag=IY40_RS06990;product=glucitol operon DNA-binding transcriptional repressor SrlR;protein_id=WP_025303878.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 51341 52312 . + . ID=gene-IY40_RS06995;Name=gutQ;gbkey=Gene;gene=gutQ;gene_biotype=protein_coding;locus_tag=IY40_RS06995;old_locus_tag=IY40_07100 NZ_JPQY01000010.1 Protein Homology CDS 51341 52312 . + 0 ID=cds-WP_016926691.1;Parent=gene-IY40_RS06995;Dbxref=GenBank:WP_016926691.1;Name=WP_016926691.1;gbkey=CDS;gene=gutQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004941509.1;locus_tag=IY40_RS06995;product=arabinose-5-phosphate isomerase GutQ;protein_id=WP_016926691.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 52352 52810 . - . ID=gene-IY40_RS07000;Name=IY40_RS07000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS07000;old_locus_tag=IY40_07105 NZ_JPQY01000010.1 Protein Homology CDS 52352 52810 . - 0 ID=cds-WP_043138014.1;Parent=gene-IY40_RS07000;Dbxref=GenBank:WP_043138014.1;Name=WP_043138014.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004951993.1;locus_tag=IY40_RS07000;product=inhibitor of vertebrate lysozyme family protein;protein_id=WP_043138014.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 52895 53695 . - . ID=gene-IY40_RS07005;Name=thiD;gbkey=Gene;gene=thiD;gene_biotype=protein_coding;locus_tag=IY40_RS07005;old_locus_tag=IY40_07110 NZ_JPQY01000010.1 Protein Homology CDS 52895 53695 . - 0 ID=cds-WP_043138018.1;Parent=gene-IY40_RS07005;Dbxref=GenBank:WP_043138018.1;Name=WP_043138018.1;Ontology_term=GO:0009228,GO:0008902,GO:0008972;gbkey=CDS;gene=thiD;go_function=hydroxymethylpyrimidine kinase activity|0008902||IEA,phosphomethylpyrimidine kinase activity|0008972||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004959824.1;locus_tag=IY40_RS07005;product=bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase;protein_id=WP_043138018.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 53695 54486 . - . ID=gene-IY40_RS07010;Name=thiM;gbkey=Gene;gene=thiM;gene_biotype=protein_coding;locus_tag=IY40_RS07010;old_locus_tag=IY40_07115 NZ_JPQY01000010.1 Protein Homology CDS 53695 54486 . - 0 ID=cds-WP_043138020.1;Parent=gene-IY40_RS07010;Dbxref=GenBank:WP_043138020.1;Name=WP_043138020.1;Ontology_term=GO:0009228,GO:0004417;gbkey=CDS;gene=thiM;go_function=hydroxyethylthiazole kinase activity|0004417||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004941501.1;locus_tag=IY40_RS07010;product=hydroxyethylthiazole kinase;protein_id=WP_043138020.1;transl_table=11 NZ_JPQY01000010.1 cmsearch riboswitch 54522 54618 . - . ID=id-NZ_JPQY01000010.1:54522..54618;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_JPQY01000010.1 RefSeq gene 54710 55324 . - . ID=gene-IY40_RS07015;Name=IY40_RS07015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS07015;old_locus_tag=IY40_07120 NZ_JPQY01000010.1 Protein Homology CDS 54710 55324 . - 0 ID=cds-WP_025303883.1;Parent=gene-IY40_RS07015;Dbxref=GenBank:WP_025303883.1;Name=WP_025303883.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004941499.1;locus_tag=IY40_RS07015;product=TetR/AcrR family transcriptional regulator;protein_id=WP_025303883.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 55542 55805 . + . ID=gene-IY40_RS07020;Name=IY40_RS07020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS07020;old_locus_tag=IY40_07125 NZ_JPQY01000010.1 Protein Homology CDS 55542 55805 . + 0 ID=cds-WP_025303884.1;Parent=gene-IY40_RS07020;Dbxref=GenBank:WP_025303884.1;Name=WP_025303884.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015378756.1;locus_tag=IY40_RS07020;product=YtcA family lipoprotein;protein_id=WP_025303884.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 55816 56853 . + . ID=gene-IY40_RS07025;Name=mdtN;gbkey=Gene;gene=mdtN;gene_biotype=protein_coding;locus_tag=IY40_RS07025;old_locus_tag=IY40_07130 NZ_JPQY01000010.1 Protein Homology CDS 55816 56853 . + 0 ID=cds-WP_043138023.1;Parent=gene-IY40_RS07025;Dbxref=GenBank:WP_043138023.1;Name=WP_043138023.1;gbkey=CDS;gene=mdtN;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016926685.1;locus_tag=IY40_RS07025;product=multidrug transporter subunit MdtN;protein_id=WP_043138023.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 56843 58822 . + . ID=gene-IY40_RS07030;Name=IY40_RS07030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS07030;old_locus_tag=IY40_07135 NZ_JPQY01000010.1 Protein Homology CDS 56843 58822 . + 0 ID=cds-WP_235211368.1;Parent=gene-IY40_RS07030;Dbxref=GenBank:WP_235211368.1;Name=WP_235211368.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015378758.1;locus_tag=IY40_RS07030;product=FUSC family protein;protein_id=WP_235211368.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 58893 59318 . + . ID=gene-IY40_RS07035;Name=IY40_RS07035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS07035;old_locus_tag=IY40_07140 NZ_JPQY01000010.1 Protein Homology CDS 58893 59318 . + 0 ID=cds-WP_043138029.1;Parent=gene-IY40_RS07035;Dbxref=GenBank:WP_043138029.1;Name=WP_043138029.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015378759.1;locus_tag=IY40_RS07035;product=GNAT family N-acetyltransferase;protein_id=WP_043138029.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 59315 60538 . - . ID=gene-IY40_RS07040;Name=IY40_RS07040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS07040;old_locus_tag=IY40_07145 NZ_JPQY01000010.1 Protein Homology CDS 59315 60538 . - 0 ID=cds-WP_043138033.1;Parent=gene-IY40_RS07040;Dbxref=GenBank:WP_043138033.1;Name=WP_043138033.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004941486.1;locus_tag=IY40_RS07040;product=MFS transporter;protein_id=WP_043138033.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 60634 61074 . + . ID=gene-IY40_RS07045;Name=IY40_RS07045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS07045;old_locus_tag=IY40_07150 NZ_JPQY01000010.1 Protein Homology CDS 60634 61074 . + 0 ID=cds-WP_043138408.1;Parent=gene-IY40_RS07045;Dbxref=GenBank:WP_043138408.1;Name=WP_043138408.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006327260.1;locus_tag=IY40_RS07045;product=winged helix-turn-helix transcriptional regulator;protein_id=WP_043138408.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 61180 62049 . + . ID=gene-IY40_RS07050;Name=rluF;gbkey=Gene;gene=rluF;gene_biotype=protein_coding;locus_tag=IY40_RS07050;old_locus_tag=IY40_07155 NZ_JPQY01000010.1 Protein Homology CDS 61180 62049 . + 0 ID=cds-WP_043138037.1;Parent=gene-IY40_RS07050;Dbxref=GenBank:WP_043138037.1;Name=WP_043138037.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;gene=rluF;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013511642.1;locus_tag=IY40_RS07050;product=23S rRNA pseudouridine(2604) synthase RluF;protein_id=WP_043138037.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 62195 65257 . - . ID=gene-IY40_RS07055;Name=IY40_RS07055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS07055;old_locus_tag=IY40_07160 NZ_JPQY01000010.1 Protein Homology CDS 62195 65257 . - 0 ID=cds-WP_043138041.1;Parent=gene-IY40_RS07055;Dbxref=GenBank:WP_043138041.1;Name=WP_043138041.1;Ontology_term=GO:0046903,GO:0015474,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=autotransporter activity|0015474||IEA;go_process=secretion|0046903||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014169013.1;locus_tag=IY40_RS07055;product=autotransporter outer membrane beta-barrel domain-containing protein;protein_id=WP_043138041.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 65453 65767 . - . ID=gene-IY40_RS07060;Name=IY40_RS07060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS07060;old_locus_tag=IY40_07165 NZ_JPQY01000010.1 Protein Homology CDS 65453 65767 . - 0 ID=cds-WP_025303891.1;Parent=gene-IY40_RS07060;Dbxref=GenBank:WP_025303891.1;Name=WP_025303891.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010435531.1;locus_tag=IY40_RS07060;product=putative periplasmic lipoprotein;protein_id=WP_025303891.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 65943 66575 . + . ID=gene-IY40_RS07065;Name=IY40_RS07065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS07065;old_locus_tag=IY40_07170 NZ_JPQY01000010.1 Protein Homology CDS 65943 66575 . + 0 ID=cds-WP_043138047.1;Parent=gene-IY40_RS07065;Dbxref=GenBank:WP_043138047.1;Name=WP_043138047.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016929736.1;locus_tag=IY40_RS07065;product=response regulator transcription factor;protein_id=WP_043138047.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 66572 68353 . + . ID=gene-IY40_RS07070;Name=IY40_RS07070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS07070;old_locus_tag=IY40_07175 NZ_JPQY01000010.1 Protein Homology CDS 66572 68353 . + 0 ID=cds-WP_025303893.1;Parent=gene-IY40_RS07070;Dbxref=GenBank:WP_025303893.1;Name=WP_025303893.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004941474.1;locus_tag=IY40_RS07070;product=hybrid sensor histidine kinase/response regulator;protein_id=WP_025303893.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 69062 69886 . + . ID=gene-IY40_RS07075;Name=IY40_RS07075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS07075 NZ_JPQY01000010.1 Protein Homology CDS 69062 69886 . + 0 ID=cds-WP_050505131.1;Parent=gene-IY40_RS07075;Dbxref=GenBank:WP_050505131.1;Name=WP_050505131.1;Ontology_term=GO:0046872,GO:0051213;gbkey=CDS;go_function=metal ion binding|0046872||IEA,dioxygenase activity|0051213||IEA;inference=COORDINATES: protein motif:HMM:NF017532.6;locus_tag=IY40_RS07075;product=phytanoyl-CoA dioxygenase family protein;protein_id=WP_050505131.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 69971 71086 . + . ID=gene-IY40_RS25115;Name=IY40_RS25115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS25115 NZ_JPQY01000010.1 Protein Homology CDS 69971 71086 . + 0 ID=cds-WP_072008236.1;Parent=gene-IY40_RS25115;Dbxref=GenBank:WP_072008236.1;Name=WP_072008236.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: protein motif:HMM:NF013884.7;locus_tag=IY40_RS25115;product=acyltransferase family protein;protein_id=WP_072008236.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 71434 73011 . - . ID=gene-IY40_RS07085;Name=guaA;gbkey=Gene;gene=guaA;gene_biotype=protein_coding;locus_tag=IY40_RS07085;old_locus_tag=IY40_07190 NZ_JPQY01000010.1 Protein Homology CDS 71434 73011 . - 0 ID=cds-WP_043138057.1;Parent=gene-IY40_RS07085;Dbxref=GenBank:WP_043138057.1;Name=WP_043138057.1;Ontology_term=GO:0006177,GO:0003922,GO:0005524,GO:0016462;gbkey=CDS;gene=guaA;go_function=GMP synthase (glutamine-hydrolyzing) activity|0003922||IEA,ATP binding|0005524||IEA,pyrophosphatase activity|0016462||IEA;go_process=GMP biosynthetic process|0006177||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228207.1;locus_tag=IY40_RS07085;product=glutamine-hydrolyzing GMP synthase;protein_id=WP_043138057.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 73114 74577 . - . ID=gene-IY40_RS07090;Name=guaB;gbkey=Gene;gene=guaB;gene_biotype=protein_coding;locus_tag=IY40_RS07090;old_locus_tag=IY40_07195 NZ_JPQY01000010.1 Protein Homology CDS 73114 74577 . - 0 ID=cds-WP_038629838.1;Parent=gene-IY40_RS07090;Dbxref=GenBank:WP_038629838.1;Name=WP_038629838.1;Ontology_term=GO:0006164,GO:0003938;gbkey=CDS;gene=guaB;go_function=IMP dehydrogenase activity|0003938||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005159574.1;locus_tag=IY40_RS07090;product=IMP dehydrogenase;protein_id=WP_038629838.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 74748 76124 . + . ID=gene-IY40_RS07095;Name=xseA;gbkey=Gene;gene=xseA;gene_biotype=protein_coding;locus_tag=IY40_RS07095;old_locus_tag=IY40_07200 NZ_JPQY01000010.1 Protein Homology CDS 74748 76124 . + 0 ID=cds-WP_043138416.1;Parent=gene-IY40_RS07095;Dbxref=GenBank:WP_043138416.1;Name=WP_043138416.1;Ontology_term=GO:0006308,GO:0008855,GO:0009318;gbkey=CDS;gene=xseA;go_component=exodeoxyribonuclease VII complex|0009318||IEA;go_function=exodeoxyribonuclease VII activity|0008855||IEA;go_process=DNA catabolic process|0006308||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012146305.1;locus_tag=IY40_RS07095;product=exodeoxyribonuclease VII large subunit;protein_id=WP_043138416.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 76130 78496 . - . ID=gene-IY40_RS07100;Name=IY40_RS07100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS07100;old_locus_tag=IY40_07205 NZ_JPQY01000010.1 Protein Homology CDS 76130 78496 . - 0 ID=cds-WP_043138059.1;Parent=gene-IY40_RS07100;Dbxref=GenBank:WP_043138059.1;Name=WP_043138059.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004941455.1;locus_tag=IY40_RS07100;product=glycoside hydrolase family 31 protein;protein_id=WP_043138059.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 78508 79818 . - . ID=gene-IY40_RS07105;Name=IY40_RS07105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS07105;old_locus_tag=IY40_07210 NZ_JPQY01000010.1 Protein Homology CDS 78508 79818 . - 0 ID=cds-WP_033635583.1;Parent=gene-IY40_RS07105;Dbxref=GenBank:WP_033635583.1;Name=WP_033635583.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016929747.1;locus_tag=IY40_RS07105;product=MFS transporter;protein_id=WP_033635583.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 80178 81260 . + . ID=gene-IY40_RS07110;Name=IY40_RS07110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS07110;old_locus_tag=IY40_07215 NZ_JPQY01000010.1 Protein Homology CDS 80178 81260 . + 0 ID=cds-WP_043138066.1;Parent=gene-IY40_RS07110;Dbxref=GenBank:WP_043138066.1;Name=WP_043138066.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004941451.1;locus_tag=IY40_RS07110;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_043138066.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 81324 82349 . + . ID=gene-IY40_RS07115;Name=IY40_RS07115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS07115;old_locus_tag=IY40_07220 NZ_JPQY01000010.1 Protein Homology CDS 81324 82349 . + 0 ID=cds-WP_043138069.1;Parent=gene-IY40_RS07115;Dbxref=GenBank:WP_043138069.1;Name=WP_043138069.1;Ontology_term=GO:0006508,GO:0004222,GO:0008270;gbkey=CDS;go_function=metalloendopeptidase activity|0004222||IEA,zinc ion binding|0008270||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004952054.1;locus_tag=IY40_RS07115;product=M4 family metallopeptidase;protein_id=WP_043138069.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 82349 82690 . + . ID=gene-IY40_RS07120;Name=IY40_RS07120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS07120;old_locus_tag=IY40_07225 NZ_JPQY01000010.1 Protein Homology CDS 82349 82690 . + 0 ID=cds-WP_016929750.1;Parent=gene-IY40_RS07120;Dbxref=GenBank:WP_016929750.1;Name=WP_016929750.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019452360.1;locus_tag=IY40_RS07120;product=protealysin inhibitor emfourin;protein_id=WP_016929750.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 82695 82916 . - . ID=gene-IY40_RS07125;Name=IY40_RS07125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS07125;old_locus_tag=IY40_07230 NZ_JPQY01000010.1 Protein Homology CDS 82695 82916 . - 0 ID=cds-WP_025303905.1;Parent=gene-IY40_RS07125;Dbxref=GenBank:WP_025303905.1;Name=WP_025303905.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004952057.1;locus_tag=IY40_RS07125;product=zinc ribbon domain-containing protein;protein_id=WP_025303905.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 82929 83885 . - . ID=gene-IY40_RS07130;Name=IY40_RS07130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS07130;old_locus_tag=IY40_07235 NZ_JPQY01000010.1 Protein Homology CDS 82929 83885 . - 0 ID=cds-WP_033648913.1;Parent=gene-IY40_RS07130;Dbxref=GenBank:WP_033648913.1;Name=WP_033648913.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019081816.1;locus_tag=IY40_RS07130;product=AEC family transporter;protein_id=WP_033648913.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 83985 85475 . - . ID=gene-IY40_RS07135;Name=der;gbkey=Gene;gene=der;gene_biotype=protein_coding;locus_tag=IY40_RS07135;old_locus_tag=IY40_07240 NZ_JPQY01000010.1 Protein Homology CDS 83985 85475 . - 0 ID=cds-WP_004941442.1;Parent=gene-IY40_RS07135;Dbxref=GenBank:WP_004941442.1;Name=WP_004941442.1;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0043022,GO:0005737;gbkey=CDS;gene=der;go_component=cytoplasm|0005737||IEA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,ribosome binding|0043022||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006318150.1;locus_tag=IY40_RS07135;product=ribosome biogenesis GTPase Der;protein_id=WP_004941442.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 85731 86912 . - . ID=gene-IY40_RS07140;Name=bamB;gbkey=Gene;gene=bamB;gene_biotype=protein_coding;locus_tag=IY40_RS07140;old_locus_tag=IY40_07245 NZ_JPQY01000010.1 Protein Homology CDS 85731 86912 . - 0 ID=cds-WP_025303907.1;Parent=gene-IY40_RS07140;Dbxref=GenBank:WP_025303907.1;Name=WP_025303907.1;Ontology_term=GO:0005515;gbkey=CDS;gene=bamB;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013650286.1;locus_tag=IY40_RS07140;product=outer membrane protein assembly factor BamB;protein_id=WP_025303907.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 86924 87544 . - . ID=gene-IY40_RS07145;Name=IY40_RS07145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS07145;old_locus_tag=IY40_07250 NZ_JPQY01000010.1 Protein Homology CDS 86924 87544 . - 0 ID=cds-WP_025303908.1;Parent=gene-IY40_RS07145;Dbxref=GenBank:WP_025303908.1;Name=WP_025303908.1;Ontology_term=GO:0005515,GO:0044877;gbkey=CDS;go_function=protein binding|0005515||IEA,protein-containing complex binding|0044877||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012303850.1;locus_tag=IY40_RS07145;product=YfgM family protein;protein_id=WP_025303908.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 87558 88832 . - . ID=gene-IY40_RS07150;Name=hisS;gbkey=Gene;gene=hisS;gene_biotype=protein_coding;locus_tag=IY40_RS07150;old_locus_tag=IY40_07255 NZ_JPQY01000010.1 Protein Homology CDS 87558 88832 . - 0 ID=cds-WP_025303909.1;Parent=gene-IY40_RS07150;Dbxref=GenBank:WP_025303909.1;Name=WP_025303909.1;Ontology_term=GO:0006427,GO:0004821,GO:0005524,GO:0005737;gbkey=CDS;gene=hisS;go_component=cytoplasm|0005737||IEA;go_function=histidine-tRNA ligase activity|0004821||IEA,ATP binding|0005524||IEA;go_process=histidyl-tRNA aminoacylation|0006427||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311403.1;locus_tag=IY40_RS07150;product=histidine--tRNA ligase;protein_id=WP_025303909.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 88972 90093 . - . ID=gene-IY40_RS07155;Name=ispG;gbkey=Gene;gene=ispG;gene_biotype=protein_coding;gene_synonym=gcpE;locus_tag=IY40_RS07155;old_locus_tag=IY40_07260 NZ_JPQY01000010.1 Protein Homology CDS 88972 90093 . - 0 ID=cds-WP_016929756.1;Parent=gene-IY40_RS07155;Dbxref=GenBank:WP_016929756.1;Name=WP_016929756.1;Ontology_term=GO:0008152,GO:0046429;gbkey=CDS;gene=ispG;go_function=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity (ferredoxin)|0046429||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016929756.1;locus_tag=IY40_RS07155;product=flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase;protein_id=WP_016929756.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 90139 91110 . - . ID=gene-IY40_RS07160;Name=rodZ;gbkey=Gene;gene=rodZ;gene_biotype=protein_coding;locus_tag=IY40_RS07160;old_locus_tag=IY40_07265 NZ_JPQY01000010.1 Protein Homology CDS 90139 91110 . - 0 ID=cds-WP_043138086.1;Parent=gene-IY40_RS07160;Dbxref=GenBank:WP_043138086.1;Name=WP_043138086.1;Ontology_term=GO:0008360,GO:0003677,GO:0016020;gbkey=CDS;gene=rodZ;go_component=membrane|0016020||IEA;go_function=DNA binding|0003677||IEA;go_process=regulation of cell shape|0008360||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013814144.1;locus_tag=IY40_RS07160;product=cytoskeleton protein RodZ;protein_id=WP_043138086.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 91100 91849 . - . ID=gene-IY40_RS07165;Name=pilW;gbkey=Gene;gene=pilW;gene_biotype=protein_coding;locus_tag=IY40_RS07165;old_locus_tag=IY40_07270 NZ_JPQY01000010.1 Protein Homology CDS 91100 91849 . - 0 ID=cds-WP_043138420.1;Parent=gene-IY40_RS07165;Dbxref=GenBank:WP_043138420.1;Name=WP_043138420.1;Ontology_term=GO:0005515;gbkey=CDS;gene=pilW;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004716157.1;locus_tag=IY40_RS07165;product=type IV pilus biogenesis/stability protein PilW;protein_id=WP_043138420.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 91948 93144 . - . ID=gene-IY40_RS07170;Name=IY40_RS07170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS07170;old_locus_tag=IY40_07275 NZ_JPQY01000010.1 Protein Homology CDS 91948 93144 . - 0 ID=cds-WP_004941426.1;Parent=gene-IY40_RS07170;Dbxref=GenBank:WP_004941426.1;Name=WP_004941426.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012146320.1;locus_tag=IY40_RS07170;product=bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN;protein_id=WP_004941426.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 93381 93806 . - . ID=gene-IY40_RS07175;Name=ndk;gbkey=Gene;gene=ndk;gene_biotype=protein_coding;locus_tag=IY40_RS07175;old_locus_tag=IY40_07280 NZ_JPQY01000010.1 Protein Homology CDS 93381 93806 . - 0 ID=cds-WP_004941424.1;Parent=gene-IY40_RS07175;Dbxref=GenBank:WP_004941424.1;Name=WP_004941424.1;Ontology_term=GO:0004550;gbkey=CDS;gene=ndk;go_function=nucleoside diphosphate kinase activity|0004550||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005172605.1;locus_tag=IY40_RS07175;product=nucleoside-diphosphate kinase;protein_id=WP_004941424.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 93968 94798 . - . ID=gene-IY40_RS07180;Name=sseB;gbkey=Gene;gene=sseB;gene_biotype=protein_coding;locus_tag=IY40_RS07180;old_locus_tag=IY40_07285 NZ_JPQY01000010.1 Protein Homology CDS 93968 94798 . - 0 ID=cds-WP_043138089.1;Parent=gene-IY40_RS07180;Dbxref=GenBank:WP_043138089.1;Name=WP_043138089.1;gbkey=CDS;gene=sseB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017893693.1;locus_tag=IY40_RS07180;product=enhanced serine sensitivity protein SseB;protein_id=WP_043138089.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 94888 96183 . - . ID=gene-IY40_RS07185;Name=pepB;gbkey=Gene;gene=pepB;gene_biotype=protein_coding;locus_tag=IY40_RS07185;old_locus_tag=IY40_07290 NZ_JPQY01000010.1 Protein Homology CDS 94888 96183 . - 0 ID=cds-WP_043138092.1;Parent=gene-IY40_RS07185;Dbxref=GenBank:WP_043138092.1;Name=WP_043138092.1;Ontology_term=GO:0006508,GO:0019538,GO:0030145,GO:0070006;gbkey=CDS;gene=pepB;go_function=manganese ion binding|0030145||IEA,metalloaminopeptidase activity|0070006||IEA;go_process=proteolysis|0006508||IEA,protein metabolic process|0019538||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013814153.1;locus_tag=IY40_RS07185;product=aminopeptidase PepB;protein_id=WP_043138092.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 96267 96467 . - . ID=gene-IY40_RS07190;Name=iscX;gbkey=Gene;gene=iscX;gene_biotype=protein_coding;locus_tag=IY40_RS07190;old_locus_tag=IY40_07295 NZ_JPQY01000010.1 Protein Homology CDS 96267 96467 . - 0 ID=cds-WP_006327336.1;Parent=gene-IY40_RS07190;Dbxref=GenBank:WP_006327336.1;Name=WP_006327336.1;Ontology_term=GO:0016226,GO:0005506;gbkey=CDS;gene=iscX;go_function=iron ion binding|0005506||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004104502.1;locus_tag=IY40_RS07190;product=Fe-S cluster assembly protein IscX;protein_id=WP_006327336.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 96500 96835 . - . ID=gene-IY40_RS07195;Name=fdx;gbkey=Gene;gene=fdx;gene_biotype=protein_coding;locus_tag=IY40_RS07195;old_locus_tag=IY40_07300 NZ_JPQY01000010.1 Protein Homology CDS 96500 96835 . - 0 ID=cds-WP_004941417.1;Parent=gene-IY40_RS07195;Dbxref=GenBank:WP_004941417.1;Name=WP_004941417.1;Ontology_term=GO:0016226,GO:0009055,GO:0051537;gbkey=CDS;gene=fdx;go_function=electron transfer activity|0009055||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015683702.1;locus_tag=IY40_RS07195;product=ISC system 2Fe-2S type ferredoxin;protein_id=WP_004941417.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 96838 98688 . - . ID=gene-IY40_RS07200;Name=hscA;gbkey=Gene;gene=hscA;gene_biotype=protein_coding;locus_tag=IY40_RS07200;old_locus_tag=IY40_07305 NZ_JPQY01000010.1 Protein Homology CDS 96838 98688 . - 0 ID=cds-WP_043138095.1;Parent=gene-IY40_RS07200;Dbxref=GenBank:WP_043138095.1;Name=WP_043138095.1;Ontology_term=GO:0006457,GO:0016226,GO:0005515,GO:0005524,GO:0016887;gbkey=CDS;gene=hscA;go_function=protein binding|0005515||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein folding|0006457||IEA,iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311419.1;locus_tag=IY40_RS07200;product=Fe-S protein assembly chaperone HscA;protein_id=WP_043138095.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 98721 99242 . - . ID=gene-IY40_RS07205;Name=hscB;gbkey=Gene;gene=hscB;gene_biotype=protein_coding;locus_tag=IY40_RS07205;old_locus_tag=IY40_07310 NZ_JPQY01000010.1 Protein Homology CDS 98721 99242 . - 0 ID=cds-WP_043138098.1;Parent=gene-IY40_RS07205;Dbxref=GenBank:WP_043138098.1;Name=WP_043138098.1;Ontology_term=GO:0051604,GO:0051087;gbkey=CDS;gene=hscB;go_function=protein-folding chaperone binding|0051087||IEA;go_process=protein maturation|0051604||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012146331.1;locus_tag=IY40_RS07205;product=co-chaperone HscB;protein_id=WP_043138098.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 99305 99628 . - . ID=gene-IY40_RS07210;Name=iscA;gbkey=Gene;gene=iscA;gene_biotype=protein_coding;locus_tag=IY40_RS07210;old_locus_tag=IY40_07315 NZ_JPQY01000010.1 Protein Homology CDS 99305 99628 . - 0 ID=cds-WP_004941410.1;Parent=gene-IY40_RS07210;Dbxref=GenBank:WP_004941410.1;Name=WP_004941410.1;gbkey=CDS;gene=iscA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228231.1;locus_tag=IY40_RS07210;product=iron-sulfur cluster assembly protein IscA;protein_id=WP_004941410.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 99683 100069 . - . ID=gene-IY40_RS07215;Name=iscU;gbkey=Gene;gene=iscU;gene_biotype=protein_coding;locus_tag=IY40_RS07215;old_locus_tag=IY40_07320 NZ_JPQY01000010.1 Protein Homology CDS 99683 100069 . - 0 ID=cds-WP_004941408.1;Parent=gene-IY40_RS07215;Dbxref=GenBank:WP_004941408.1;Name=WP_004941408.1;Ontology_term=GO:0016226,GO:0005198,GO:0005506,GO:0051536;gbkey=CDS;gene=iscU;go_function=structural molecule activity|0005198||IEA,iron ion binding|0005506||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209835.1;locus_tag=IY40_RS07215;product=Fe-S cluster assembly scaffold IscU;protein_id=WP_004941408.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 100094 101308 . - . ID=gene-IY40_RS07220;Name=iscS;gbkey=Gene;gene=iscS;gene_biotype=protein_coding;locus_tag=IY40_RS07220;old_locus_tag=IY40_07325 NZ_JPQY01000010.1 Protein Homology CDS 100094 101308 . - 0 ID=cds-WP_043138101.1;Parent=gene-IY40_RS07220;Dbxref=GenBank:WP_043138101.1;Name=WP_043138101.1;gbkey=CDS;gene=iscS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017459011.1;locus_tag=IY40_RS07220;product=cysteine desulfurase;protein_id=WP_043138101.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 101363 101857 . - . ID=gene-IY40_RS07225;Name=iscR;gbkey=Gene;gene=iscR;gene_biotype=protein_coding;locus_tag=IY40_RS07225;old_locus_tag=IY40_07330 NZ_JPQY01000010.1 Protein Homology CDS 101363 101857 . - 0 ID=cds-WP_004941404.1;Parent=gene-IY40_RS07225;Dbxref=GenBank:WP_004941404.1;Name=WP_004941404.1;gbkey=CDS;gene=iscR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009638942.1;locus_tag=IY40_RS07225;product=Fe-S cluster assembly transcriptional regulator IscR;protein_id=WP_004941404.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 102051 102785 . - . ID=gene-IY40_RS07230;Name=trmJ;gbkey=Gene;gene=trmJ;gene_biotype=protein_coding;locus_tag=IY40_RS07230;old_locus_tag=IY40_07335 NZ_JPQY01000010.1 Protein Homology CDS 102051 102785 . - 0 ID=cds-WP_025303916.1;Parent=gene-IY40_RS07230;Dbxref=GenBank:WP_025303916.1;Name=WP_025303916.1;Ontology_term=GO:0006396,GO:0003723,GO:0008173;gbkey=CDS;gene=trmJ;go_function=RNA binding|0003723||IEA,RNA methyltransferase activity|0008173||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012146336.1;locus_tag=IY40_RS07230;product=tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ;protein_id=WP_025303916.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 102905 103708 . + . ID=gene-IY40_RS07235;Name=suhB;gbkey=Gene;gene=suhB;gene_biotype=protein_coding;locus_tag=IY40_RS07235;old_locus_tag=IY40_07340 NZ_JPQY01000010.1 Protein Homology CDS 102905 103708 . + 0 ID=cds-WP_025303917.1;Parent=gene-IY40_RS07235;Dbxref=GenBank:WP_025303917.1;Name=WP_025303917.1;Ontology_term=GO:0046854,GO:0008934;gbkey=CDS;gene=suhB;go_function=inositol monophosphate 1-phosphatase activity|0008934||IEA;go_process=phosphatidylinositol phosphate biosynthetic process|0046854||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311426.1;locus_tag=IY40_RS07235;product=inositol-1-monophosphatase;protein_id=WP_025303917.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 103765 104787 . - . ID=gene-IY40_RS07240;Name=IY40_RS07240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS07240;old_locus_tag=IY40_07345 NZ_JPQY01000010.1 Protein Homology CDS 103765 104787 . - 0 ID=cds-WP_043138105.1;Parent=gene-IY40_RS07240;Dbxref=GenBank:WP_043138105.1;Name=WP_043138105.1;Ontology_term=GO:0035444,GO:0015099,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=nickel cation transmembrane transporter activity|0015099||IEA;go_process=nickel cation transmembrane transport|0035444||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012146338.1;locus_tag=IY40_RS07240;product=nickel/cobalt transporter;protein_id=WP_043138105.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 104778 105413 . - . ID=gene-IY40_RS07245;Name=IY40_RS07245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS07245;old_locus_tag=IY40_07350 NZ_JPQY01000010.1 Protein Homology CDS 104778 105413 . - 0 ID=cds-WP_028127507.1;Parent=gene-IY40_RS07245;Dbxref=GenBank:WP_028127507.1;Name=WP_028127507.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006708458.1;locus_tag=IY40_RS07245;product=DUF1007 family protein;protein_id=WP_028127507.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 105596 106861 . + . ID=gene-IY40_RS07250;Name=csiE;gbkey=Gene;gene=csiE;gene_biotype=protein_coding;locus_tag=IY40_RS07250;old_locus_tag=IY40_07355 NZ_JPQY01000010.1 Protein Homology CDS 105596 106861 . + 0 ID=cds-WP_043138108.1;Parent=gene-IY40_RS07250;Dbxref=GenBank:WP_043138108.1;Name=WP_043138108.1;gbkey=CDS;gene=csiE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004941394.1;locus_tag=IY40_RS07250;product=stationary phase inducible protein CsiE;protein_id=WP_043138108.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 106862 108007 . - . ID=gene-IY40_RS07255;Name=IY40_RS07255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS07255;old_locus_tag=IY40_07360 NZ_JPQY01000010.1 Protein Homology CDS 106862 108007 . - 0 ID=cds-WP_025303921.1;Parent=gene-IY40_RS07255;Dbxref=GenBank:WP_025303921.1;Name=WP_025303921.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004941392.1;locus_tag=IY40_RS07255;product=3-phenylpropionate MFS transporter;protein_id=WP_025303921.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 108164 109417 . - . ID=gene-IY40_RS07260;Name=glyA;gbkey=Gene;gene=glyA;gene_biotype=protein_coding;locus_tag=IY40_RS07260;old_locus_tag=IY40_07365 NZ_JPQY01000010.1 Protein Homology CDS 108164 109417 . - 0 ID=cds-WP_025303922.1;Parent=gene-IY40_RS07260;Dbxref=GenBank:WP_025303922.1;Name=WP_025303922.1;Ontology_term=GO:0019264,GO:0004372,GO:0008270,GO:0030170,GO:0070905;gbkey=CDS;gene=glyA;go_function=glycine hydroxymethyltransferase activity|0004372||IEA,zinc ion binding|0008270||IEA,pyridoxal phosphate binding|0030170||IEA,serine binding|0070905||IEA;go_process=glycine biosynthetic process from serine|0019264||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019077397.1;locus_tag=IY40_RS07260;product=serine hydroxymethyltransferase;protein_id=WP_025303922.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 109775 110965 . + . ID=gene-IY40_RS07265;Name=hmpA;gbkey=Gene;gene=hmpA;gene_biotype=protein_coding;locus_tag=IY40_RS07265;old_locus_tag=IY40_07370 NZ_JPQY01000010.1 Protein Homology CDS 109775 110965 . + 0 ID=cds-WP_043138113.1;Parent=gene-IY40_RS07265;Dbxref=GenBank:WP_043138113.1;Name=WP_043138113.1;Ontology_term=GO:0051409,GO:0008941,GO:0019825,GO:0020037,GO:0071949;gbkey=CDS;gene=hmpA;go_function=nitric oxide dioxygenase NAD(P)H activity|0008941||IEA,oxygen binding|0019825||IEA,heme binding|0020037||IEA,FAD binding|0071949||IEA;go_process=response to nitrosative stress|0051409||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005172672.1;locus_tag=IY40_RS07265;product=NO-inducible flavohemoprotein;protein_id=WP_043138113.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 111003 112187 . - . ID=gene-IY40_RS07270;Name=IY40_RS07270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS07270;old_locus_tag=IY40_07375 NZ_JPQY01000010.1 Protein Homology CDS 111003 112187 . - 0 ID=cds-WP_043138118.1;Parent=gene-IY40_RS07270;Dbxref=GenBank:WP_043138118.1;Name=WP_043138118.1;Ontology_term=GO:0009055,GO:0020037,GO:0046872;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004941386.1;locus_tag=IY40_RS07270;product=c-type cytochrome;protein_id=WP_043138118.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 112184 114094 . - . ID=gene-IY40_RS07275;Name=IY40_RS07275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS07275;old_locus_tag=IY40_07380 NZ_JPQY01000010.1 Protein Homology CDS 112184 114094 . - 0 ID=cds-WP_043138121.1;Parent=gene-IY40_RS07275;Dbxref=GenBank:WP_043138121.1;Name=WP_043138121.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015741193.1;locus_tag=IY40_RS07275;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_043138121.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 114180 115604 . - . ID=gene-IY40_RS07280;Name=patD;gbkey=Gene;gene=patD;gene_biotype=protein_coding;locus_tag=IY40_RS07280;old_locus_tag=IY40_07385 NZ_JPQY01000010.1 Protein Homology CDS 114180 115604 . - 0 ID=cds-WP_043138126.1;Parent=gene-IY40_RS07280;Dbxref=GenBank:WP_043138126.1;Name=WP_043138126.1;Ontology_term=GO:0009447,GO:0019145,GO:0051287;gbkey=CDS;gene=patD;go_function=aminobutyraldehyde dehydrogenase (NAD+) activity|0019145||IEA,NAD binding|0051287||IEA;go_process=putrescine catabolic process|0009447||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006327349.1;locus_tag=IY40_RS07280;product=aminobutyraldehyde dehydrogenase;protein_id=WP_043138126.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 115640 116446 . - . ID=gene-IY40_RS07285;Name=IY40_RS07285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS07285;old_locus_tag=IY40_07390 NZ_JPQY01000010.1 Protein Homology CDS 115640 116446 . - 0 ID=cds-WP_004941378.1;Parent=gene-IY40_RS07285;Dbxref=GenBank:WP_004941378.1;Name=WP_004941378.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008804683.1;locus_tag=IY40_RS07285;product=ABC transporter permease;protein_id=WP_004941378.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 116436 117380 . - . ID=gene-IY40_RS07290;Name=IY40_RS07290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS07290;old_locus_tag=IY40_07395 NZ_JPQY01000010.1 Protein Homology CDS 116436 117380 . - 0 ID=cds-WP_033644105.1;Parent=gene-IY40_RS07290;Dbxref=GenBank:WP_033644105.1;Name=WP_033644105.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016929775.1;locus_tag=IY40_RS07290;product=ABC transporter permease;protein_id=WP_033644105.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 117382 118410 . - . ID=gene-IY40_RS07295;Name=IY40_RS07295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS07295;old_locus_tag=IY40_07400 NZ_JPQY01000010.1 Protein Homology CDS 117382 118410 . - 0 ID=cds-WP_015378790.1;Parent=gene-IY40_RS07295;Dbxref=GenBank:WP_015378790.1;Name=WP_015378790.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016929776.1;locus_tag=IY40_RS07295;product=ABC transporter ATP-binding protein;protein_id=WP_015378790.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 118464 119618 . - . ID=gene-IY40_RS07300;Name=ydcS;gbkey=Gene;gene=ydcS;gene_biotype=protein_coding;locus_tag=IY40_RS07300;old_locus_tag=IY40_07405 NZ_JPQY01000010.1 Protein Homology CDS 118464 119618 . - 0 ID=cds-WP_025303928.1;Parent=gene-IY40_RS07300;Dbxref=GenBank:WP_025303928.1;Name=WP_025303928.1;gbkey=CDS;gene=ydcS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415957.1;locus_tag=IY40_RS07300;product=putative ABC transporter substrate-binding protein YdcS;protein_id=WP_025303928.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 119692 121155 . - . ID=gene-IY40_RS07305;Name=IY40_RS07305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS07305;old_locus_tag=IY40_07410 NZ_JPQY01000010.1 Protein Homology CDS 119692 121155 . - 0 ID=cds-WP_043138131.1;Parent=gene-IY40_RS07305;Dbxref=GenBank:WP_043138131.1;Name=WP_043138131.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012146354.1;locus_tag=IY40_RS07305;product=gamma-aminobutyraldehyde dehydrogenase;protein_id=WP_043138131.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 121271 122194 . - . ID=gene-IY40_RS07310;Name=IY40_RS07310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS07310;old_locus_tag=IY40_07415 NZ_JPQY01000010.1 Protein Homology CDS 121271 122194 . - 0 ID=cds-WP_004941365.1;Parent=gene-IY40_RS07310;Dbxref=GenBank:WP_004941365.1;Name=WP_004941365.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004952128.1;locus_tag=IY40_RS07310;product=LysR substrate-binding domain-containing protein;protein_id=WP_004941365.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 122399 122737 . - . ID=gene-IY40_RS07315;Name=glnB;gbkey=Gene;gene=glnB;gene_biotype=protein_coding;locus_tag=IY40_RS07315;old_locus_tag=IY40_07420 NZ_JPQY01000010.1 Protein Homology CDS 122399 122737 . - 0 ID=cds-WP_004847623.1;Parent=gene-IY40_RS07315;Dbxref=GenBank:WP_004847623.1;Name=WP_004847623.1;gbkey=CDS;gene=glnB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311446.1;locus_tag=IY40_RS07315;product=nitrogen regulatory protein P-II;protein_id=WP_004847623.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 122749 124371 . - . ID=gene-IY40_RS07320;Name=IY40_RS07320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS07320;old_locus_tag=IY40_07425 NZ_JPQY01000010.1 Protein Homology CDS 122749 124371 . - 0 ID=cds-WP_025303930.1;Parent=gene-IY40_RS07320;Dbxref=GenBank:WP_025303930.1;Name=WP_025303930.1;Ontology_term=GO:0009435,GO:0003952,GO:0005524;gbkey=CDS;go_function=NAD+ synthase (glutamine-hydrolyzing) activity|0003952||IEA,ATP binding|0005524||IEA;go_process=NAD+ biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211555.1;locus_tag=IY40_RS07320;product=NAD+ synthase;protein_id=WP_025303930.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 124502 125842 . - . ID=gene-IY40_RS07325;Name=glrR;gbkey=Gene;gene=glrR;gene_biotype=protein_coding;locus_tag=IY40_RS07325;old_locus_tag=IY40_07430 NZ_JPQY01000010.1 Protein Homology CDS 124502 125842 . - 0 ID=cds-WP_025303931.1;Parent=gene-IY40_RS07325;Dbxref=GenBank:WP_025303931.1;Name=WP_025303931.1;Ontology_term=GO:0000160,GO:0006355,GO:0005524,GO:0008134;gbkey=CDS;gene=glrR;go_function=ATP binding|0005524||IEA,transcription factor binding|0008134||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002216116.1;locus_tag=IY40_RS07325;product=two-component system response regulator GlrR;protein_id=WP_025303931.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 125839 126711 . - . ID=gene-IY40_RS07330;Name=qseG;gbkey=Gene;gene=qseG;gene_biotype=protein_coding;locus_tag=IY40_RS07330 NZ_JPQY01000010.1 Protein Homology CDS 125839 126711 . - 0 ID=cds-WP_050505132.1;Parent=gene-IY40_RS07330;Dbxref=GenBank:WP_050505132.1;Name=WP_050505132.1;gbkey=CDS;gene=qseG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019452330.1;locus_tag=IY40_RS07330;product=two-component system QseEF-associated lipoprotein QseG;protein_id=WP_050505132.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 126715 128151 . - . ID=gene-IY40_RS07335;Name=IY40_RS07335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS07335;old_locus_tag=IY40_07440 NZ_JPQY01000010.1 Protein Homology CDS 126715 128151 . - 0 ID=cds-WP_025303933.1;Parent=gene-IY40_RS07335;Dbxref=GenBank:WP_025303933.1;Name=WP_025303933.1;Ontology_term=GO:0000160,GO:0007165,GO:0000155,GO:0004673,GO:0005524,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192820.1;locus_tag=IY40_RS07335;product=sensor histidine kinase;protein_id=WP_025303933.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 129038 132931 . - . ID=gene-IY40_RS07340;Name=purL;gbkey=Gene;gene=purL;gene_biotype=protein_coding;gene_synonym=purI;locus_tag=IY40_RS07340;old_locus_tag=IY40_07445 NZ_JPQY01000010.1 Protein Homology CDS 129038 132931 . - 0 ID=cds-WP_200877944.1;Parent=gene-IY40_RS07340;Dbxref=GenBank:WP_200877944.1;Name=WP_200877944.1;Ontology_term=GO:0004642;gbkey=CDS;gene=purL;go_function=phosphoribosylformylglycinamidine synthase activity|0004642||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311450.1;locus_tag=IY40_RS07340;product=phosphoribosylformylglycinamidine synthase;protein_id=WP_200877944.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 133207 134667 . + . ID=gene-IY40_RS07345;Name=mltF;gbkey=Gene;gene=mltF;gene_biotype=protein_coding;locus_tag=IY40_RS07345;old_locus_tag=IY40_07450 NZ_JPQY01000010.1 Protein Homology CDS 133207 134667 . + 0 ID=cds-WP_025303935.1;Parent=gene-IY40_RS07345;Dbxref=GenBank:WP_025303935.1;Name=WP_025303935.1;Ontology_term=GO:0000270,GO:0008933,GO:0016020;gbkey=CDS;gene=mltF;go_component=membrane|0016020||IEA;go_function=peptidoglycan lytic transglycosylase activity|0008933||IEA;go_process=peptidoglycan metabolic process|0000270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020439617.1;locus_tag=IY40_RS07345;product=membrane-bound lytic murein transglycosylase MltF;protein_id=WP_025303935.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 134668 135174 . - . ID=gene-IY40_RS07350;Name=tadA;gbkey=Gene;gene=tadA;gene_biotype=protein_coding;locus_tag=IY40_RS07350;old_locus_tag=IY40_07455 NZ_JPQY01000010.1 Protein Homology CDS 134668 135174 . - 0 ID=cds-WP_033644114.1;Parent=gene-IY40_RS07350;Dbxref=GenBank:WP_033644114.1;Name=WP_033644114.1;Ontology_term=GO:0002100,GO:0008251,GO:0008270;gbkey=CDS;gene=tadA;go_function=tRNA-specific adenosine deaminase activity|0008251||IEA,zinc ion binding|0008270||IEA;go_process=tRNA wobble adenosine to inosine editing|0002100||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016929783.1;locus_tag=IY40_RS07350;product=tRNA adenosine(34) deaminase TadA;protein_id=WP_033644114.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 135292 136344 . + . ID=gene-IY40_RS07355;Name=IY40_RS07355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS07355;old_locus_tag=IY40_07460 NZ_JPQY01000010.1 Protein Homology CDS 135292 136344 . + 0 ID=cds-WP_043138139.1;Parent=gene-IY40_RS07355;Dbxref=GenBank:WP_043138139.1;Name=WP_043138139.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013814171.1;locus_tag=IY40_RS07355;product=DUF2157 domain-containing protein;protein_id=WP_043138139.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 136390 137046 . - . ID=gene-IY40_RS07360;Name=yfhb;gbkey=Gene;gene=yfhb;gene_biotype=protein_coding;locus_tag=IY40_RS07360;old_locus_tag=IY40_07465 NZ_JPQY01000010.1 Protein Homology CDS 136390 137046 . - 0 ID=cds-WP_043138142.1;Parent=gene-IY40_RS07360;Dbxref=GenBank:WP_043138142.1;Name=WP_043138142.1;Ontology_term=GO:0016787;gbkey=CDS;gene=yfhb;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004929188.1;locus_tag=IY40_RS07360;product=phosphatidylglycerophosphatase C;protein_id=WP_043138142.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 137050 138417 . - . ID=gene-IY40_RS07365;Name=IY40_RS07365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS07365;old_locus_tag=IY40_07470 NZ_JPQY01000010.1 Protein Homology CDS 137050 138417 . - 0 ID=cds-WP_043138427.1;Parent=gene-IY40_RS07365;Dbxref=GenBank:WP_043138427.1;Name=WP_043138427.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006327376.1;locus_tag=IY40_RS07365;product=PTS transporter subunit EIIC;protein_id=WP_043138427.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 138436 139329 . - . ID=gene-IY40_RS07370;Name=murQ;gbkey=Gene;gene=murQ;gene_biotype=protein_coding;locus_tag=IY40_RS07370;old_locus_tag=IY40_07475 NZ_JPQY01000010.1 Protein Homology CDS 138436 139329 . - 0 ID=cds-WP_043138145.1;Parent=gene-IY40_RS07370;Dbxref=GenBank:WP_043138145.1;Name=WP_043138145.1;Ontology_term=GO:0009254,GO:0046348,GO:0016835;gbkey=CDS;gene=murQ;go_function=carbon-oxygen lyase activity|0016835||IEA;go_process=peptidoglycan turnover|0009254||IEA,amino sugar catabolic process|0046348||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004952145.1;locus_tag=IY40_RS07370;product=N-acetylmuramic acid 6-phosphate etherase;protein_id=WP_043138145.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 139497 140345 . + . ID=gene-IY40_RS07375;Name=IY40_RS07375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS07375;old_locus_tag=IY40_07480 NZ_JPQY01000010.1 Protein Homology CDS 139497 140345 . + 0 ID=cds-WP_016929788.1;Parent=gene-IY40_RS07375;Dbxref=GenBank:WP_016929788.1;Name=WP_016929788.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211566.1;locus_tag=IY40_RS07375;product=MurR/RpiR family transcriptional regulator;protein_id=WP_016929788.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 140489 142033 . + . ID=gene-IY40_RS25120;Name=IY40_RS25120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS25120 NZ_JPQY01000010.1 Protein Homology CDS 140489 142033 . + 0 ID=cds-WP_200877943.1;Parent=gene-IY40_RS25120;Dbxref=GenBank:WP_200877943.1;Name=WP_200877943.1;Ontology_term=GO:0009244,GO:1900727,GO:0016776;gbkey=CDS;go_function=phosphotransferase activity%2C phosphate group as acceptor|0016776||IEA;go_process=lipopolysaccharide core region biosynthetic process|0009244||IEA,osmoregulated periplasmic glucan biosynthetic process|1900727||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012146369.1;locus_tag=IY40_RS25120;product=phosphoethanolamine transferase;protein_id=WP_200877943.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 142371 142610 . + . ID=gene-IY40_RS07385;Name=IY40_RS07385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS07385;old_locus_tag=IY40_07490 NZ_JPQY01000010.1 Protein Homology CDS 142371 142610 . + 0 ID=cds-WP_043138150.1;Parent=gene-IY40_RS07385;Dbxref=GenBank:WP_043138150.1;Name=WP_043138150.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019455906.1;locus_tag=IY40_RS07385;product=hypothetical protein;protein_id=WP_043138150.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 142678 144153 . - . ID=gene-IY40_RS25125;Name=IY40_RS25125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS25125 NZ_JPQY01000010.1 Protein Homology CDS 142678 144153 . - 0 ID=cds-WP_072008238.1;Parent=gene-IY40_RS25125;Dbxref=GenBank:WP_072008238.1;Name=WP_072008238.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016926955.1;locus_tag=IY40_RS25125;product=phage tail fiber protein;protein_id=WP_072008238.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 144177 144761 . - . ID=gene-IY40_RS25130;Name=IY40_RS25130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS25130;old_locus_tag=IY40_07500 NZ_JPQY01000010.1 Protein Homology CDS 144177 144761 . - 0 ID=cds-WP_072008239.1;Parent=gene-IY40_RS25130;Dbxref=GenBank:WP_072008239.1;Name=WP_072008239.1;Ontology_term=GO:0098004;gbkey=CDS;go_process=virus tail fiber assembly|0098004||IEA;inference=COORDINATES: protein motif:HMM:NF014467.6;locus_tag=IY40_RS25130;product=tail fiber assembly protein;protein_id=WP_072008239.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 144770 145213 . - . ID=gene-IY40_RS26470;Name=IY40_RS26470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS26470 NZ_JPQY01000010.1 Protein Homology CDS 144770 145213 . - 0 ID=cds-WP_235211370.1;Parent=gene-IY40_RS26470;Dbxref=GenBank:WP_235211370.1;Name=WP_235211370.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019126.6;locus_tag=IY40_RS26470;product=phage tail protein;protein_id=WP_235211370.1;transl_table=11 NZ_JPQY01000010.1 RefSeq pseudogene 145262 145684 . - . ID=gene-IY40_RS26475;Name=IY40_RS26475;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IY40_RS26475;partial=true;pseudo=true;start_range=.,145262 NZ_JPQY01000010.1 Protein Homology CDS 145262 145684 . - 0 ID=cds-IY40_RS26475;Parent=gene-IY40_RS26475;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004935809.1;locus_tag=IY40_RS26475;partial=true;product=tail fiber domain-containing protein;pseudo=true;start_range=.,145262;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 145734 146705 . - . ID=gene-IY40_RS07400;Name=IY40_RS07400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS07400;old_locus_tag=IY40_07510 NZ_JPQY01000010.1 Protein Homology CDS 145734 146705 . - 0 ID=cds-WP_152561289.1;Parent=gene-IY40_RS07400;Dbxref=GenBank:WP_152561289.1;Name=WP_152561289.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF040110.5;locus_tag=IY40_RS07400;product=DUF6453 family protein;protein_id=WP_152561289.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 146725 149931 . - . ID=gene-IY40_RS07405;Name=IY40_RS07405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS07405;old_locus_tag=IY40_07515 NZ_JPQY01000010.1 Protein Homology CDS 146725 149931 . - 0 ID=cds-WP_043138156.1;Parent=gene-IY40_RS07405;Dbxref=GenBank:WP_043138156.1;Name=WP_043138156.1;Ontology_term=GO:0019062,GO:0046813,GO:0098003,GO:0098015;gbkey=CDS;go_component=virus tail|0098015||IEA;go_process=virion attachment to host cell|0019062||IEA,receptor-mediated virion attachment to host cell|0046813||IEA,viral tail assembly|0098003||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012017608.1;locus_tag=IY40_RS07405;product=TipJ family phage tail tip protein;protein_id=WP_043138156.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 150098 150343 . + . ID=gene-IY40_RS07410;Name=IY40_RS07410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS07410;old_locus_tag=IY40_07520 NZ_JPQY01000010.1 Protein Homology CDS 150098 150343 . + 0 ID=cds-WP_043138158.1;Parent=gene-IY40_RS07410;Dbxref=GenBank:WP_043138158.1;Name=WP_043138158.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008322431.1;locus_tag=IY40_RS07410;product=hypothetical protein;protein_id=WP_043138158.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 150464 150964 . - . ID=gene-IY40_RS07415;Name=IY40_RS07415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS07415;old_locus_tag=IY40_07525 NZ_JPQY01000010.1 Protein Homology CDS 150464 150964 . - 0 ID=cds-WP_229601731.1;Parent=gene-IY40_RS07415;Dbxref=GenBank:WP_229601731.1;Name=WP_229601731.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004935815.1;locus_tag=IY40_RS07415;product=tail assembly protein;protein_id=WP_229601731.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 151133 151471 . - . ID=gene-IY40_RS25900;Name=IY40_RS25900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS25900 NZ_JPQY01000010.1 GeneMarkS-2+ CDS 151133 151471 . - 0 ID=cds-WP_152561290.1;Parent=gene-IY40_RS25900;Dbxref=GenBank:WP_152561290.1;Name=WP_152561290.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IY40_RS25900;product=hypothetical protein;protein_id=WP_152561290.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 151509 152213 . - . ID=gene-IY40_RS07420;Name=IY40_RS07420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS07420;old_locus_tag=IY40_07530 NZ_JPQY01000010.1 Protein Homology CDS 151509 152213 . - 0 ID=cds-WP_043138161.1;Parent=gene-IY40_RS07420;Dbxref=GenBank:WP_043138161.1;Name=WP_043138161.1;Ontology_term=GO:0006508,GO:0008233,GO:0008270,GO:0016787;gbkey=CDS;go_function=peptidase activity|0008233||IEA,zinc ion binding|0008270||IEA,hydrolase activity|0016787||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004935819.1;locus_tag=IY40_RS07420;product=C40 family peptidase;protein_id=WP_043138161.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 152222 152974 . - . ID=gene-IY40_RS07425;Name=IY40_RS07425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS07425;old_locus_tag=IY40_07535 NZ_JPQY01000010.1 Protein Homology CDS 152222 152974 . - 0 ID=cds-WP_200877945.1;Parent=gene-IY40_RS07425;Dbxref=GenBank:WP_200877945.1;Name=WP_200877945.1;Ontology_term=GO:0046718,GO:0051536,GO:0030430;gbkey=CDS;go_component=host cell cytoplasm|0030430||IEA;go_function=iron-sulfur cluster binding|0051536||IEA;go_process=symbiont entry into host cell|0046718||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211709.1;locus_tag=IY40_RS07425;product=phage minor tail protein L;protein_id=WP_200877945.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 152984 153322 . - . ID=gene-IY40_RS25140;Name=IY40_RS25140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS25140 NZ_JPQY01000010.1 Protein Homology CDS 152984 153322 . - 0 ID=cds-WP_072008240.1;Parent=gene-IY40_RS25140;Dbxref=GenBank:WP_072008240.1;Name=WP_072008240.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004935824.1;locus_tag=IY40_RS25140;product=phage tail protein;protein_id=WP_072008240.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 153322 156429 . - . ID=gene-IY40_RS07430;Name=IY40_RS07430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS07430;old_locus_tag=IY40_07540 NZ_JPQY01000010.1 Protein Homology CDS 153322 156429 . - 0 ID=cds-WP_043138167.1;Parent=gene-IY40_RS07430;Dbxref=GenBank:WP_043138167.1;Name=WP_043138167.1;Ontology_term=GO:0016032,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004957961.1;locus_tag=IY40_RS07430;product=phage tail tape measure protein;protein_id=WP_043138167.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 156422 156721 . - . ID=gene-IY40_RS07435;Name=IY40_RS07435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS07435;old_locus_tag=IY40_07545 NZ_JPQY01000010.1 Protein Homology CDS 156422 156721 . - 0 ID=cds-WP_043138172.1;Parent=gene-IY40_RS07435;Dbxref=GenBank:WP_043138172.1;Name=WP_043138172.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013813808.1;locus_tag=IY40_RS07435;product=phage tail assembly protein T;protein_id=WP_043138172.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 156742 157164 . - . ID=gene-IY40_RS07440;Name=gpG;gbkey=Gene;gene=gpG;gene_biotype=protein_coding;locus_tag=IY40_RS07440;old_locus_tag=IY40_07550 NZ_JPQY01000010.1 Protein Homology CDS 156742 157164 . - 0 ID=cds-WP_235211369.1;Parent=gene-IY40_RS07440;Dbxref=GenBank:WP_235211369.1;Name=WP_235211369.1;gbkey=CDS;gene=gpG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013813809.1;locus_tag=IY40_RS07440;product=phage tail assembly chaperone G;protein_id=WP_235211369.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 157197 157934 . - . ID=gene-IY40_RS07445;Name=IY40_RS07445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS07445;old_locus_tag=IY40_07555 NZ_JPQY01000010.1 Protein Homology CDS 157197 157934 . - 0 ID=cds-WP_043138176.1;Parent=gene-IY40_RS07445;Dbxref=GenBank:WP_043138176.1;Name=WP_043138176.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013813810.1;locus_tag=IY40_RS07445;product=phage tail protein;protein_id=WP_043138176.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 157946 158347 . - . ID=gene-IY40_RS07450;Name=IY40_RS07450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS07450;old_locus_tag=IY40_07560 NZ_JPQY01000010.1 Protein Homology CDS 157946 158347 . - 0 ID=cds-WP_043138179.1;Parent=gene-IY40_RS07450;Dbxref=GenBank:WP_043138179.1;Name=WP_043138179.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004957952.1;locus_tag=IY40_RS07450;product=phage minor tail U family protein;protein_id=WP_043138179.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 158344 158907 . - . ID=gene-IY40_RS07455;Name=IY40_RS07455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS07455;old_locus_tag=IY40_07565 NZ_JPQY01000010.1 Protein Homology CDS 158344 158907 . - 0 ID=cds-WP_033647457.1;Parent=gene-IY40_RS07455;Dbxref=GenBank:WP_033647457.1;Name=WP_033647457.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013813812.1;locus_tag=IY40_RS07455;product=phage tail protein;protein_id=WP_033647457.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 158918 159193 . - . ID=gene-IY40_RS07460;Name=IY40_RS07460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS07460;old_locus_tag=IY40_07570 NZ_JPQY01000010.1 Protein Homology CDS 158918 159193 . - 0 ID=cds-WP_043138198.1;Parent=gene-IY40_RS07460;Dbxref=GenBank:WP_043138198.1;Name=WP_043138198.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013813813.1;locus_tag=IY40_RS07460;product=ATP-binding protein;protein_id=WP_043138198.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 159186 159509 . - . ID=gene-IY40_RS07465;Name=IY40_RS07465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS07465;old_locus_tag=IY40_07575 NZ_JPQY01000010.1 Protein Homology CDS 159186 159509 . - 0 ID=cds-WP_043138202.1;Parent=gene-IY40_RS07465;Dbxref=GenBank:WP_043138202.1;Name=WP_043138202.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013813814.1;locus_tag=IY40_RS07465;product=DUF2190 family protein;protein_id=WP_043138202.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 159594 161618 . - . ID=gene-IY40_RS07470;Name=IY40_RS07470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS07470;old_locus_tag=IY40_07580 NZ_JPQY01000010.1 Protein Homology CDS 159594 161618 . - 0 ID=cds-WP_043138205.1;Parent=gene-IY40_RS07470;Dbxref=GenBank:WP_043138205.1;Name=WP_043138205.1;Ontology_term=GO:0019082,GO:0004252;gbkey=CDS;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=viral protein processing|0019082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001114424.1;locus_tag=IY40_RS07470;product=ClpP-like prohead protease/major capsid protein fusion protein;protein_id=WP_043138205.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 161560 163071 . - . ID=gene-IY40_RS07475;Name=IY40_RS07475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS07475;old_locus_tag=IY40_07585 NZ_JPQY01000010.1 Protein Homology CDS 161560 163071 . - 0 ID=cds-WP_043138210.1;Parent=gene-IY40_RS07475;Dbxref=GenBank:WP_043138210.1;Name=WP_043138210.1;Ontology_term=GO:0019068,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=virion assembly|0019068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013813816.1;locus_tag=IY40_RS07475;product=phage portal protein;protein_id=WP_043138210.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 163068 163283 . - . ID=gene-IY40_RS07480;Name=IY40_RS07480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS07480;old_locus_tag=IY40_07590 NZ_JPQY01000010.1 Protein Homology CDS 163068 163283 . - 0 ID=cds-WP_033646499.1;Parent=gene-IY40_RS07480;Dbxref=GenBank:WP_033646499.1;Name=WP_033646499.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004957939.1;locus_tag=IY40_RS07480;product=hypothetical protein;protein_id=WP_033646499.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 163280 165391 . - . ID=gene-IY40_RS07485;Name=IY40_RS07485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS07485;old_locus_tag=IY40_07595 NZ_JPQY01000010.1 Protein Homology CDS 163280 165391 . - 0 ID=cds-WP_043138216.1;Parent=gene-IY40_RS07485;Dbxref=GenBank:WP_043138216.1;Name=WP_043138216.1;Ontology_term=GO:0004519,GO:0005524,GO:0016887;gbkey=CDS;go_function=endonuclease activity|0004519||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013813818.1;locus_tag=IY40_RS07485;product=phage terminase large subunit family protein;protein_id=WP_043138216.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 165381 165890 . - . ID=gene-IY40_RS07490;Name=IY40_RS07490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS07490;old_locus_tag=IY40_07600 NZ_JPQY01000010.1 Protein Homology CDS 165381 165890 . - 0 ID=cds-WP_043138219.1;Parent=gene-IY40_RS07490;Dbxref=GenBank:WP_043138219.1;Name=WP_043138219.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013813819.1;locus_tag=IY40_RS07490;product=DUF1441 family protein;protein_id=WP_043138219.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 166196 166399 . - . ID=gene-IY40_RS07495;Name=IY40_RS07495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS07495;old_locus_tag=IY40_07605 NZ_JPQY01000010.1 Protein Homology CDS 166196 166399 . - 0 ID=cds-WP_043138448.1;Parent=gene-IY40_RS07495;Dbxref=GenBank:WP_043138448.1;Name=WP_043138448.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017455732.1;locus_tag=IY40_RS07495;product=hypothetical protein;protein_id=WP_043138448.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 166554 166838 . - . ID=gene-IY40_RS07500;Name=IY40_RS07500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS07500;old_locus_tag=IY40_07610 NZ_JPQY01000010.1 Protein Homology CDS 166554 166838 . - 0 ID=cds-WP_043138221.1;Parent=gene-IY40_RS07500;Dbxref=GenBank:WP_043138221.1;Name=WP_043138221.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019705417.1;locus_tag=IY40_RS07500;product=Acb2/Tad1 domain-containing protein;protein_id=WP_043138221.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 166961 167155 . - . ID=gene-IY40_RS07505;Name=IY40_RS07505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS07505;old_locus_tag=IY40_07615 NZ_JPQY01000010.1 Protein Homology CDS 166961 167155 . - 0 ID=cds-WP_043138224.1;Parent=gene-IY40_RS07505;Dbxref=GenBank:WP_043138224.1;Name=WP_043138224.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020317317.1;locus_tag=IY40_RS07505;product=hypothetical protein;protein_id=WP_043138224.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 167152 167679 . - . ID=gene-IY40_RS07510;Name=IY40_RS07510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS07510;old_locus_tag=IY40_07620 NZ_JPQY01000010.1 Protein Homology CDS 167152 167679 . - 0 ID=cds-WP_043138227.1;Parent=gene-IY40_RS07510;Dbxref=GenBank:WP_043138227.1;Name=WP_043138227.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004953511.1;locus_tag=IY40_RS07510;product=hypothetical protein;protein_id=WP_043138227.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 167679 168161 . - . ID=gene-IY40_RS07515;Name=IY40_RS07515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS07515;old_locus_tag=IY40_07625 NZ_JPQY01000010.1 Protein Homology CDS 167679 168161 . - 0 ID=cds-WP_043138231.1;Parent=gene-IY40_RS07515;Dbxref=GenBank:WP_043138231.1;Name=WP_043138231.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001251747.1;locus_tag=IY40_RS07515;product=lysozyme;protein_id=WP_043138231.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 168164 168409 . - . ID=gene-IY40_RS07520;Name=IY40_RS07520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS07520;old_locus_tag=IY40_07630 NZ_JPQY01000010.1 Protein Homology CDS 168164 168409 . - 0 ID=cds-WP_043138234.1;Parent=gene-IY40_RS07520;Dbxref=GenBank:WP_043138234.1;Name=WP_043138234.1;Ontology_term=GO:0001907,GO:0019835,GO:0140911;gbkey=CDS;go_function=pore-forming activity|0140911||IEA;go_process=symbiont-mediated killing of host cell|0001907||IEA,cytolysis|0019835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008499363.1;locus_tag=IY40_RS07520;product=phage holin;protein_id=WP_043138234.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 168566 169588 . - . ID=gene-IY40_RS07525;Name=IY40_RS07525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS07525;old_locus_tag=IY40_07635 NZ_JPQY01000010.1 Protein Homology CDS 168566 169588 . - 0 ID=cds-WP_043138239.1;Parent=gene-IY40_RS07525;Dbxref=GenBank:WP_043138239.1;Name=WP_043138239.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004953515.1;locus_tag=IY40_RS07525;product=DNA-methyltransferase;protein_id=WP_043138239.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 169741 170307 . - . ID=gene-IY40_RS07530;Name=IY40_RS07530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS07530;old_locus_tag=IY40_07640 NZ_JPQY01000010.1 Protein Homology CDS 169741 170307 . - 0 ID=cds-WP_043138243.1;Parent=gene-IY40_RS07530;Dbxref=GenBank:WP_043138243.1;Name=WP_043138243.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014716038.1;locus_tag=IY40_RS07530;product=hypothetical protein;protein_id=WP_043138243.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 170344 171318 . - . ID=gene-IY40_RS07535;Name=IY40_RS07535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS07535;old_locus_tag=IY40_07645 NZ_JPQY01000010.1 Protein Homology CDS 170344 171318 . - 0 ID=cds-WP_043138247.1;Parent=gene-IY40_RS07535;Dbxref=GenBank:WP_043138247.1;Name=WP_043138247.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002443611.1;locus_tag=IY40_RS07535;product=DUF4747 family protein;protein_id=WP_043138247.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 171568 172239 . - . ID=gene-IY40_RS07540;Name=IY40_RS07540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS07540;old_locus_tag=IY40_07650 NZ_JPQY01000010.1 Protein Homology CDS 171568 172239 . - 0 ID=cds-WP_043138250.1;Parent=gene-IY40_RS07540;Dbxref=GenBank:WP_043138250.1;Name=WP_043138250.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004953527.1;locus_tag=IY40_RS07540;product=hypothetical protein;protein_id=WP_043138250.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 172236 172814 . - . ID=gene-IY40_RS07545;Name=IY40_RS07545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS07545;old_locus_tag=IY40_07655 NZ_JPQY01000010.1 Protein Homology CDS 172236 172814 . - 0 ID=cds-WP_043138253.1;Parent=gene-IY40_RS07545;Dbxref=GenBank:WP_043138253.1;Name=WP_043138253.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006622907.1;locus_tag=IY40_RS07545;product=recombination protein NinG;protein_id=WP_043138253.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 172798 173784 . - . ID=gene-IY40_RS07550;Name=IY40_RS07550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS07550;old_locus_tag=IY40_07660 NZ_JPQY01000010.1 Protein Homology CDS 172798 173784 . - 0 ID=cds-WP_043138256.1;Parent=gene-IY40_RS07550;Dbxref=GenBank:WP_043138256.1;Name=WP_043138256.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004953535.1;locus_tag=IY40_RS07550;product=toprim domain-containing protein;protein_id=WP_043138256.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 173781 175310 . - . ID=gene-IY40_RS07555;Name=IY40_RS07555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS07555;old_locus_tag=IY40_07665 NZ_JPQY01000010.1 Protein Homology CDS 173781 175310 . - 0 ID=cds-WP_043138259.1;Parent=gene-IY40_RS07555;Dbxref=GenBank:WP_043138259.1;Name=WP_043138259.1;Ontology_term=GO:0003677,GO:0005524,GO:0016787;gbkey=CDS;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004953544.1;locus_tag=IY40_RS07555;product=DEAD/DEAH box helicase;protein_id=WP_043138259.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 175497 175796 . - . ID=gene-IY40_RS07560;Name=IY40_RS07560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS07560;old_locus_tag=IY40_07670 NZ_JPQY01000010.1 Protein Homology CDS 175497 175796 . - 0 ID=cds-WP_043138262.1;Parent=gene-IY40_RS07560;Dbxref=GenBank:WP_043138262.1;Name=WP_043138262.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009112599.1;locus_tag=IY40_RS07560;product=hypothetical protein;protein_id=WP_043138262.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 175831 176364 . - . ID=gene-IY40_RS07565;Name=IY40_RS07565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS07565;old_locus_tag=IY40_07675 NZ_JPQY01000010.1 Protein Homology CDS 175831 176364 . - 0 ID=cds-WP_043138266.1;Parent=gene-IY40_RS07565;Dbxref=GenBank:WP_043138266.1;Name=WP_043138266.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006326670.1;locus_tag=IY40_RS07565;product=YmfL family putative regulatory protein;protein_id=WP_043138266.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 176423 176653 . - . ID=gene-IY40_RS25145;Name=IY40_RS25145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS25145 NZ_JPQY01000010.1 Protein Homology CDS 176423 176653 . - 0 ID=cds-WP_072008241.1;Parent=gene-IY40_RS25145;Dbxref=GenBank:WP_072008241.1;Name=WP_072008241.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005286430.1;locus_tag=IY40_RS25145;product=helix-turn-helix transcriptional regulator;protein_id=WP_072008241.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 176758 177423 . + . ID=gene-IY40_RS07570;Name=IY40_RS07570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS07570;old_locus_tag=IY40_07680 NZ_JPQY01000010.1 Protein Homology CDS 176758 177423 . + 0 ID=cds-WP_033653816.1;Parent=gene-IY40_RS07570;Dbxref=GenBank:WP_033653816.1;Name=WP_033653816.1;Ontology_term=GO:0045892,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004191591.1;locus_tag=IY40_RS07570;product=LexA family protein;protein_id=WP_033653816.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 178099 178239 . + . ID=gene-IY40_RS26230;Name=IY40_RS26230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS26230 NZ_JPQY01000010.1 GeneMarkS-2+ CDS 178099 178239 . + 0 ID=cds-WP_161781781.1;Parent=gene-IY40_RS26230;Dbxref=GenBank:WP_161781781.1;Name=WP_161781781.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IY40_RS26230;product=hypothetical protein;protein_id=WP_161781781.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 178483 178611 . + . ID=gene-IY40_RS26625;Name=IY40_RS26625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS26625 NZ_JPQY01000010.1 GeneMarkS-2+ CDS 178483 178611 . + 0 ID=cds-WP_265182939.1;Parent=gene-IY40_RS26625;Dbxref=GenBank:WP_265182939.1;Name=WP_265182939.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IY40_RS26625;product=hypothetical protein;protein_id=WP_265182939.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 178788 179150 . + . ID=gene-IY40_RS07575;Name=IY40_RS07575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS07575;old_locus_tag=IY40_07695 NZ_JPQY01000010.1 Protein Homology CDS 178788 179150 . + 0 ID=cds-WP_043138271.1;Parent=gene-IY40_RS07575;Dbxref=GenBank:WP_043138271.1;Name=WP_043138271.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006326678.1;locus_tag=IY40_RS07575;product=hypothetical protein;protein_id=WP_043138271.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 179193 180014 . + . ID=gene-IY40_RS07580;Name=IY40_RS07580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS07580;old_locus_tag=IY40_07700 NZ_JPQY01000010.1 Protein Homology CDS 179193 180014 . + 0 ID=cds-WP_043138273.1;Parent=gene-IY40_RS07580;Dbxref=GenBank:WP_043138273.1;Name=WP_043138273.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017145550.1;locus_tag=IY40_RS07580;product=YfdQ family protein;protein_id=WP_043138273.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 180087 180920 . + . ID=gene-IY40_RS07585;Name=IY40_RS07585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS07585 NZ_JPQY01000010.1 Protein Homology CDS 180087 180920 . + 0 ID=cds-WP_043138277.1;Parent=gene-IY40_RS07585;Dbxref=GenBank:WP_043138277.1;Name=WP_043138277.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014071204.1;locus_tag=IY40_RS07585;product=ParB/RepB/Spo0J family partition protein;protein_id=WP_043138277.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 180917 181135 . + . ID=gene-IY40_RS07590;Name=IY40_RS07590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS07590;old_locus_tag=IY40_07710 NZ_JPQY01000010.1 Protein Homology CDS 180917 181135 . + 0 ID=cds-WP_043138281.1;Parent=gene-IY40_RS07590;Dbxref=GenBank:WP_043138281.1;Name=WP_043138281.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009112585.1;locus_tag=IY40_RS07590;product=ParE family toxin-like protein;protein_id=WP_043138281.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 181149 182060 . + . ID=gene-IY40_RS07595;Name=IY40_RS07595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS07595 NZ_JPQY01000010.1 Protein Homology CDS 181149 182060 . + 0 ID=cds-WP_050505136.1;Parent=gene-IY40_RS07595;Dbxref=GenBank:WP_050505136.1;Name=WP_050505136.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: protein motif:HMM:NF013658.7;locus_tag=IY40_RS07595;product=phosphoadenosine phosphosulfate reductase domain-containing protein;protein_id=WP_050505136.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 182050 182304 . + . ID=gene-IY40_RS07600;Name=IY40_RS07600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS07600;old_locus_tag=IY40_07720 NZ_JPQY01000010.1 GeneMarkS-2+ CDS 182050 182304 . + 0 ID=cds-WP_043138284.1;Parent=gene-IY40_RS07600;Dbxref=GenBank:WP_043138284.1;Name=WP_043138284.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IY40_RS07600;product=hypothetical protein;protein_id=WP_043138284.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 182297 182470 . + . ID=gene-IY40_RS26235;Name=IY40_RS26235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS26235 NZ_JPQY01000010.1 GeneMarkS-2+ CDS 182297 182470 . + 0 ID=cds-WP_161781782.1;Parent=gene-IY40_RS26235;Dbxref=GenBank:WP_161781782.1;Name=WP_161781782.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IY40_RS26235;product=hypothetical protein;protein_id=WP_161781782.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 182467 182652 . + . ID=gene-IY40_RS07605;Name=IY40_RS07605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS07605;old_locus_tag=IY40_07730 NZ_JPQY01000010.1 GeneMarkS-2+ CDS 182467 182652 . + 0 ID=cds-WP_043138287.1;Parent=gene-IY40_RS07605;Dbxref=GenBank:WP_043138287.1;Name=WP_043138287.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IY40_RS07605;product=hypothetical protein;protein_id=WP_043138287.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 182642 183196 . + . ID=gene-IY40_RS07610;Name=IY40_RS07610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS07610;old_locus_tag=IY40_07735 NZ_JPQY01000010.1 GeneMarkS-2+ CDS 182642 183196 . + 0 ID=cds-WP_043138291.1;Parent=gene-IY40_RS07610;Dbxref=GenBank:WP_043138291.1;Name=WP_043138291.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IY40_RS07610;product=hypothetical protein;protein_id=WP_043138291.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 183189 183404 . + . ID=gene-IY40_RS25150;Name=IY40_RS25150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS25150 NZ_JPQY01000010.1 Protein Homology CDS 183189 183404 . + 0 ID=cds-WP_072008242.1;Parent=gene-IY40_RS25150;Dbxref=GenBank:WP_072008242.1;Name=WP_072008242.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006814788.1;locus_tag=IY40_RS25150;product=MerR family transcriptional regulator;protein_id=WP_072008242.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 183401 184798 . - . ID=gene-IY40_RS07615;Name=IY40_RS07615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS07615;old_locus_tag=IY40_07740 NZ_JPQY01000010.1 Protein Homology CDS 183401 184798 . - 0 ID=cds-WP_043138296.1;Parent=gene-IY40_RS07615;Dbxref=GenBank:WP_043138296.1;Name=WP_043138296.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004953573.1;locus_tag=IY40_RS07615;product=site-specific integrase;protein_id=WP_043138296.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 185014 185274 . + . ID=gene-IY40_RS07620;Name=IY40_RS07620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS07620;old_locus_tag=IY40_07745 NZ_JPQY01000010.1 Protein Homology CDS 185014 185274 . + 0 ID=cds-WP_043138299.1;Parent=gene-IY40_RS07620;Dbxref=GenBank:WP_043138299.1;Name=WP_043138299.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017373573.1;locus_tag=IY40_RS07620;product=YfhL family 4Fe-4S dicluster ferredoxin;protein_id=WP_043138299.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 185319 185699 . - . ID=gene-IY40_RS07625;Name=acpS;gbkey=Gene;gene=acpS;gene_biotype=protein_coding;locus_tag=IY40_RS07625;old_locus_tag=IY40_07750 NZ_JPQY01000010.1 Protein Homology CDS 185319 185699 . - 0 ID=cds-WP_043138303.1;Parent=gene-IY40_RS07625;Dbxref=GenBank:WP_043138303.1;Name=WP_043138303.1;Ontology_term=GO:0008610,GO:0008897;gbkey=CDS;gene=acpS;go_function=holo-[acyl-carrier-protein] synthase activity|0008897||IEA;go_process=lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228259.1;locus_tag=IY40_RS07625;product=holo-ACP synthase;protein_id=WP_043138303.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 185699 186430 . - . ID=gene-IY40_RS07630;Name=pdxJ;gbkey=Gene;gene=pdxJ;gene_biotype=protein_coding;locus_tag=IY40_RS07630;old_locus_tag=IY40_07755 NZ_JPQY01000010.1 Protein Homology CDS 185699 186430 . - 0 ID=cds-WP_043138305.1;Parent=gene-IY40_RS07630;Dbxref=GenBank:WP_043138305.1;Name=WP_043138305.1;Ontology_term=GO:0008615,GO:0033856;gbkey=CDS;gene=pdxJ;go_function=pyridoxine 5'-phosphate synthase activity|0033856||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192826.1;locus_tag=IY40_RS07630;product=pyridoxine 5'-phosphate synthase;protein_id=WP_043138305.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 186502 187233 . - . ID=gene-IY40_RS07635;Name=recO;gbkey=Gene;gene=recO;gene_biotype=protein_coding;locus_tag=IY40_RS07635;old_locus_tag=IY40_07760 NZ_JPQY01000010.1 Protein Homology CDS 186502 187233 . - 0 ID=cds-WP_043138309.1;Parent=gene-IY40_RS07635;Dbxref=GenBank:WP_043138309.1;Name=WP_043138309.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677;gbkey=CDS;gene=recO;go_function=DNA binding|0003677||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013814177.1;locus_tag=IY40_RS07635;product=DNA repair protein RecO;protein_id=WP_043138309.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 187240 188148 . - . ID=gene-IY40_RS07640;Name=era;gbkey=Gene;gene=era;gene_biotype=protein_coding;locus_tag=IY40_RS07640;old_locus_tag=IY40_07765 NZ_JPQY01000010.1 Protein Homology CDS 187240 188148 . - 0 ID=cds-WP_025303944.1;Parent=gene-IY40_RS07640;Dbxref=GenBank:WP_025303944.1;Name=WP_025303944.1;Ontology_term=GO:0003723,GO:0005525;gbkey=CDS;gene=era;go_function=RNA binding|0003723||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002214829.1;locus_tag=IY40_RS07640;product=GTPase Era;protein_id=WP_025303944.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 188145 188825 . - . ID=gene-IY40_RS07645;Name=rnc;gbkey=Gene;gene=rnc;gene_biotype=protein_coding;locus_tag=IY40_RS07645;old_locus_tag=IY40_07770 NZ_JPQY01000010.1 Protein Homology CDS 188145 188825 . - 0 ID=cds-WP_004929158.1;Parent=gene-IY40_RS07645;Dbxref=GenBank:WP_004929158.1;Name=WP_004929158.1;Ontology_term=GO:0006364,GO:0006396,GO:0003723,GO:0004525;gbkey=CDS;gene=rnc;go_function=RNA binding|0003723||IEA,ribonuclease III activity|0004525||IEA;go_process=rRNA processing|0006364||IEA,RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015960048.1;locus_tag=IY40_RS07645;product=ribonuclease III;protein_id=WP_004929158.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 189061 190038 . - . ID=gene-IY40_RS07650;Name=lepB;gbkey=Gene;gene=lepB;gene_biotype=protein_coding;locus_tag=IY40_RS07650;old_locus_tag=IY40_07775 NZ_JPQY01000010.1 Protein Homology CDS 189061 190038 . - 0 ID=cds-WP_015378805.1;Parent=gene-IY40_RS07650;Dbxref=GenBank:WP_015378805.1;Name=WP_015378805.1;Ontology_term=GO:0006465,GO:0004252;gbkey=CDS;gene=lepB;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=signal peptide processing|0006465||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005159411.1;locus_tag=IY40_RS07650;product=signal peptidase I;protein_id=WP_015378805.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 190071 191870 . - . ID=gene-IY40_RS07655;Name=lepA;gbkey=Gene;gene=lepA;gene_biotype=protein_coding;locus_tag=IY40_RS07655;old_locus_tag=IY40_07780 NZ_JPQY01000010.1 Protein Homology CDS 190071 191870 . - 0 ID=cds-WP_025303945.1;Parent=gene-IY40_RS07655;Dbxref=GenBank:WP_025303945.1;Name=WP_025303945.1;Ontology_term=GO:0003924,GO:0005525;gbkey=CDS;gene=lepA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228266.1;locus_tag=IY40_RS07655;product=translation elongation factor 4;protein_id=WP_025303945.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 192390 193226 . + . ID=gene-IY40_RS07660;Name=IY40_RS07660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS07660;old_locus_tag=IY40_07785 NZ_JPQY01000010.1 Protein Homology CDS 192390 193226 . + 0 ID=cds-WP_043138313.1;Parent=gene-IY40_RS07660;Dbxref=GenBank:WP_043138313.1;Name=WP_043138313.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015378807.1;locus_tag=IY40_RS07660;product=hypothetical protein;protein_id=WP_043138313.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 193223 193699 . - . ID=gene-IY40_RS07665;Name=rseC;gbkey=Gene;gene=rseC;gene_biotype=protein_coding;locus_tag=IY40_RS07665;old_locus_tag=IY40_07790 NZ_JPQY01000010.1 Protein Homology CDS 193223 193699 . - 0 ID=cds-WP_004929144.1;Parent=gene-IY40_RS07665;Dbxref=GenBank:WP_004929144.1;Name=WP_004929144.1;gbkey=CDS;gene=rseC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004929144.1;locus_tag=IY40_RS07665;product=SoxR-reducing system protein RseC;protein_id=WP_004929144.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 193699 194655 . - . ID=gene-IY40_RS07670;Name=rseB;gbkey=Gene;gene=rseB;gene_biotype=protein_coding;locus_tag=IY40_RS07670;old_locus_tag=IY40_07795 NZ_JPQY01000010.1 Protein Homology CDS 193699 194655 . - 0 ID=cds-WP_025303948.1;Parent=gene-IY40_RS07670;Dbxref=GenBank:WP_025303948.1;Name=WP_025303948.1;gbkey=CDS;gene=rseB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004929141.1;locus_tag=IY40_RS07670;product=sigma-E factor regulatory protein RseB;protein_id=WP_025303948.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 194655 195308 . - . ID=gene-IY40_RS07675;Name=rseA;gbkey=Gene;gene=rseA;gene_biotype=protein_coding;locus_tag=IY40_RS07675;old_locus_tag=IY40_07800 NZ_JPQY01000010.1 Protein Homology CDS 194655 195308 . - 0 ID=cds-WP_043138319.1;Parent=gene-IY40_RS07675;Dbxref=GenBank:WP_043138319.1;Name=WP_043138319.1;Ontology_term=GO:0016989;gbkey=CDS;gene=rseA;go_function=sigma factor antagonist activity|0016989||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005172760.1;locus_tag=IY40_RS07675;product=anti-sigma-E factor RseA;protein_id=WP_043138319.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 195339 195914 . - . ID=gene-IY40_RS07680;Name=rpoE;gbkey=Gene;gene=rpoE;gene_biotype=protein_coding;locus_tag=IY40_RS07680;old_locus_tag=IY40_07805 NZ_JPQY01000010.1 Protein Homology CDS 195339 195914 . - 0 ID=cds-WP_004929136.1;Parent=gene-IY40_RS07680;Dbxref=GenBank:WP_004929136.1;Name=WP_004929136.1;Ontology_term=GO:0006352,GO:0006355,GO:0003677,GO:0003700,GO:0016987;gbkey=CDS;gene=rpoE;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461575.1;locus_tag=IY40_RS07680;product=RNA polymerase sigma factor RpoE;protein_id=WP_004929136.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 196129 197730 . + . ID=gene-IY40_RS07685;Name=nadB;gbkey=Gene;gene=nadB;gene_biotype=protein_coding;locus_tag=IY40_RS07685;old_locus_tag=IY40_07810 NZ_JPQY01000010.1 Protein Homology CDS 196129 197730 . + 0 ID=cds-WP_025303949.1;Parent=gene-IY40_RS07685;Dbxref=GenBank:WP_025303949.1;Name=WP_025303949.1;Ontology_term=GO:0009435,GO:0008734;gbkey=CDS;gene=nadB;go_function=L-aspartate oxidase activity|0008734||IEA;go_process=NAD+ biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209671.1;locus_tag=IY40_RS07685;product=L-aspartate oxidase;protein_id=WP_025303949.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 197769 198548 . - . ID=gene-IY40_RS07690;Name=trmN;gbkey=Gene;gene=trmN;gene_biotype=protein_coding;locus_tag=IY40_RS07690;old_locus_tag=IY40_07815 NZ_JPQY01000010.1 Protein Homology CDS 197769 198548 . - 0 ID=cds-WP_025303950.1;Parent=gene-IY40_RS07690;Dbxref=GenBank:WP_025303950.1;Name=WP_025303950.1;Ontology_term=GO:0030488,GO:0003676,GO:0016430;gbkey=CDS;gene=trmN;go_function=nucleic acid binding|0003676||IEA,tRNA (adenine-N6)-methyltransferase activity|0016430||IEA;go_process=tRNA methylation|0030488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020453942.1;locus_tag=IY40_RS07690;product=tRNA(1)(Val) (adenine(37)-N(6))-methyltransferase TrmN;protein_id=WP_025303950.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 198648 199970 . + . ID=gene-IY40_RS07695;Name=srmB;gbkey=Gene;gene=srmB;gene_biotype=protein_coding;locus_tag=IY40_RS07695;old_locus_tag=IY40_07820 NZ_JPQY01000010.1 Protein Homology CDS 198648 199970 . + 0 ID=cds-WP_025303951.1;Parent=gene-IY40_RS07695;Dbxref=GenBank:WP_025303951.1;Name=WP_025303951.1;Ontology_term=GO:0000027,GO:0003724;gbkey=CDS;gene=srmB;go_function=RNA helicase activity|0003724||IEA;go_process=ribosomal large subunit assembly|0000027||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016929798.1;locus_tag=IY40_RS07695;product=ATP-dependent RNA helicase SrmB;protein_id=WP_025303951.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 200023 200778 . - . ID=gene-IY40_RS07700;Name=IY40_RS07700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS07700;old_locus_tag=IY40_07825 NZ_JPQY01000010.1 Protein Homology CDS 200023 200778 . - 0 ID=cds-WP_043138324.1;Parent=gene-IY40_RS07700;Dbxref=GenBank:WP_043138324.1;Name=WP_043138324.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004929120.1;locus_tag=IY40_RS07700;product=ankyrin repeat domain-containing protein;protein_id=WP_043138324.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 200771 201733 . - . ID=gene-IY40_RS07705;Name=IY40_RS07705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS07705;old_locus_tag=IY40_07830 NZ_JPQY01000010.1 Protein Homology CDS 200771 201733 . - 0 ID=cds-WP_025303953.1;Parent=gene-IY40_RS07705;Dbxref=GenBank:WP_025303953.1;Name=WP_025303953.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017893730.1;locus_tag=IY40_RS07705;product=DUF2974 domain-containing protein;protein_id=WP_025303953.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 201917 202300 . - . ID=gene-IY40_RS07710;Name=grcA;gbkey=Gene;gene=grcA;gene_biotype=protein_coding;locus_tag=IY40_RS07710;old_locus_tag=IY40_07835 NZ_JPQY01000010.1 Protein Homology CDS 201917 202300 . - 0 ID=cds-WP_004929114.1;Parent=gene-IY40_RS07710;Dbxref=GenBank:WP_004929114.1;Name=WP_004929114.1;Ontology_term=GO:0003824;gbkey=CDS;gene=grcA;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007728348.1;locus_tag=IY40_RS07710;product=autonomous glycyl radical cofactor GrcA;protein_id=WP_004929114.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 202647 203330 . + . ID=gene-IY40_RS07715;Name=ung;gbkey=Gene;gene=ung;gene_biotype=protein_coding;locus_tag=IY40_RS07715;old_locus_tag=IY40_07840 NZ_JPQY01000010.1 Protein Homology CDS 202647 203330 . + 0 ID=cds-WP_033635636.1;Parent=gene-IY40_RS07715;Dbxref=GenBank:WP_033635636.1;Name=WP_033635636.1;Ontology_term=GO:0006284,GO:0004844,GO:0016799;gbkey=CDS;gene=ung;go_function=uracil DNA N-glycosylase activity|0004844||IEA,hydrolase activity%2C hydrolyzing N-glycosyl compounds|0016799||IEA;go_process=base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012146389.1;locus_tag=IY40_RS07715;product=uracil-DNA glycosylase;protein_id=WP_033635636.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 203387 203971 . - . ID=gene-IY40_RS07720;Name=grpE;gbkey=Gene;gene=grpE;gene_biotype=protein_coding;locus_tag=IY40_RS07720;old_locus_tag=IY40_07845 NZ_JPQY01000010.1 Protein Homology CDS 203387 203971 . - 0 ID=cds-WP_025303955.1;Parent=gene-IY40_RS07720;Dbxref=GenBank:WP_025303955.1;Name=WP_025303955.1;Ontology_term=GO:0006457,GO:0000774,GO:0042803,GO:0051087;gbkey=CDS;gene=grpE;go_function=adenyl-nucleotide exchange factor activity|0000774||IEA,protein homodimerization activity|0042803||IEA,protein-folding chaperone binding|0051087||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004713984.1;locus_tag=IY40_RS07720;product=nucleotide exchange factor GrpE;protein_id=WP_025303955.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 204097 204975 . + . ID=gene-IY40_RS07725;Name=nadK;gbkey=Gene;gene=nadK;gene_biotype=protein_coding;locus_tag=IY40_RS07725;old_locus_tag=IY40_07850 NZ_JPQY01000010.1 Protein Homology CDS 204097 204975 . + 0 ID=cds-WP_043138328.1;Parent=gene-IY40_RS07725;Dbxref=GenBank:WP_043138328.1;Name=WP_043138328.1;Ontology_term=GO:0003951;gbkey=CDS;gene=nadK;go_function=NAD+ kinase activity|0003951||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228355.1;locus_tag=IY40_RS07725;product=NAD(+) kinase;protein_id=WP_043138328.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 205062 206723 . + . ID=gene-IY40_RS07730;Name=recN;gbkey=Gene;gene=recN;gene_biotype=protein_coding;locus_tag=IY40_RS07730;old_locus_tag=IY40_07855 NZ_JPQY01000010.1 Protein Homology CDS 205062 206723 . + 0 ID=cds-WP_043138331.1;Parent=gene-IY40_RS07730;Dbxref=GenBank:WP_043138331.1;Name=WP_043138331.1;Ontology_term=GO:0006281,GO:0006310,GO:0005524;gbkey=CDS;gene=recN;go_function=ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015378818.1;locus_tag=IY40_RS07730;product=DNA repair protein RecN;protein_id=WP_043138331.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 206964 207302 . + . ID=gene-IY40_RS07735;Name=bamE;gbkey=Gene;gene=bamE;gene_biotype=protein_coding;locus_tag=IY40_RS07735;old_locus_tag=IY40_07860 NZ_JPQY01000010.1 Protein Homology CDS 206964 207302 . + 0 ID=cds-WP_004929101.1;Parent=gene-IY40_RS07735;Dbxref=GenBank:WP_004929101.1;Name=WP_004929101.1;gbkey=CDS;gene=bamE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461615.1;locus_tag=IY40_RS07735;product=outer membrane protein assembly factor BamE;protein_id=WP_004929101.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 207419 207703 . - . ID=gene-IY40_RS07740;Name=IY40_RS07740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS07740;old_locus_tag=IY40_07865 NZ_JPQY01000010.1 Protein Homology CDS 207419 207703 . - 0 ID=cds-WP_004929098.1;Parent=gene-IY40_RS07740;Dbxref=GenBank:WP_004929098.1;Name=WP_004929098.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012146394.1;locus_tag=IY40_RS07740;product=RnfH family protein;protein_id=WP_004929098.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 207696 208130 . - . ID=gene-IY40_RS07745;Name=IY40_RS07745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS07745;old_locus_tag=IY40_07870 NZ_JPQY01000010.1 Protein Homology CDS 207696 208130 . - 0 ID=cds-WP_033648948.1;Parent=gene-IY40_RS07745;Dbxref=GenBank:WP_033648948.1;Name=WP_033648948.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012146395.1;locus_tag=IY40_RS07745;product=type II toxin-antitoxin system RatA family toxin;protein_id=WP_033648948.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 208292 208774 . + . ID=gene-IY40_RS07750;Name=smpB;gbkey=Gene;gene=smpB;gene_biotype=protein_coding;locus_tag=IY40_RS07750;old_locus_tag=IY40_07875 NZ_JPQY01000010.1 Protein Homology CDS 208292 208774 . + 0 ID=cds-WP_016929804.1;Parent=gene-IY40_RS07750;Dbxref=GenBank:WP_016929804.1;Name=WP_016929804.1;Ontology_term=GO:0003723;gbkey=CDS;gene=smpB;go_function=RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012146396.1;locus_tag=IY40_RS07750;product=SsrA-binding protein SmpB;protein_id=WP_016929804.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 208824 209187 . + . ID=gene-IY40_RS25155;Name=ssrA;gbkey=Gene;gene=ssrA;gene_biotype=tmRNA;locus_tag=IY40_RS25155 NZ_JPQY01000010.1 cmsearch tmRNA 208824 209187 . + . ID=rna-IY40_RS25155;Parent=gene-IY40_RS25155;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=IY40_RS25155;product=transfer-messenger RNA NZ_JPQY01000010.1 cmsearch exon 208824 209187 . + . ID=exon-IY40_RS25155-1;Parent=rna-IY40_RS25155;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=IY40_RS25155;product=transfer-messenger RNA NZ_JPQY01000010.1 RefSeq gene 209285 209632 . - . ID=gene-IY40_RS07755;Name=IY40_RS07755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS07755;old_locus_tag=IY40_07880 NZ_JPQY01000010.1 Protein Homology CDS 209285 209632 . - 0 ID=cds-WP_043138333.1;Parent=gene-IY40_RS07755;Dbxref=GenBank:WP_043138333.1;Name=WP_043138333.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016929815.1;locus_tag=IY40_RS07755;product=DUF6404 family protein;protein_id=WP_043138333.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 209736 211397 . - . ID=gene-IY40_RS07760;Name=IY40_RS07760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS07760;old_locus_tag=IY40_07885 NZ_JPQY01000010.1 Protein Homology CDS 209736 211397 . - 0 ID=cds-WP_043138337.1;Parent=gene-IY40_RS07760;Dbxref=GenBank:WP_043138337.1;Name=WP_043138337.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010247433.1;locus_tag=IY40_RS07760;product=DUF2534 family protein;protein_id=WP_043138337.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 211469 211885 . - . ID=gene-IY40_RS07765;Name=IY40_RS07765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS07765;old_locus_tag=IY40_07890 NZ_JPQY01000010.1 Protein Homology CDS 211469 211885 . - 0 ID=cds-WP_233494350.1;Parent=gene-IY40_RS07765;Dbxref=GenBank:WP_233494350.1;Name=WP_233494350.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019452297.1;locus_tag=IY40_RS07765;product=DUF2946 domain-containing protein;protein_id=WP_233494350.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 211997 212449 . - . ID=gene-IY40_RS07770;Name=IY40_RS07770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS07770;old_locus_tag=IY40_07895 NZ_JPQY01000010.1 Protein Homology CDS 211997 212449 . - 0 ID=cds-WP_043138456.1;Parent=gene-IY40_RS07770;Dbxref=GenBank:WP_043138456.1;Name=WP_043138456.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004953673.1;locus_tag=IY40_RS07770;product=GNAT family N-acetyltransferase;protein_id=WP_043138456.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 212548 213282 . + . ID=gene-IY40_RS07775;Name=IY40_RS07775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS07775;old_locus_tag=IY40_07900 NZ_JPQY01000010.1 Protein Homology CDS 212548 213282 . + 0 ID=cds-WP_043138344.1;Parent=gene-IY40_RS07775;Dbxref=GenBank:WP_043138344.1;Name=WP_043138344.1;Ontology_term=GO:0032259,GO:0008168,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019082902.1;locus_tag=IY40_RS07775;product=class I SAM-dependent methyltransferase;protein_id=WP_043138344.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 213342 213842 . - . ID=gene-IY40_RS07780;Name=IY40_RS07780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS07780;old_locus_tag=IY40_07905 NZ_JPQY01000010.1 Protein Homology CDS 213342 213842 . - 0 ID=cds-WP_025303970.1;Parent=gene-IY40_RS07780;Dbxref=GenBank:WP_025303970.1;Name=WP_025303970.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019452268.1;locus_tag=IY40_RS07780;product=GNAT family N-acetyltransferase;protein_id=WP_025303970.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 213928 214854 . + . ID=gene-IY40_RS07785;Name=IY40_RS07785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS07785;old_locus_tag=IY40_07910 NZ_JPQY01000010.1 Protein Homology CDS 213928 214854 . + 0 ID=cds-WP_043138348.1;Parent=gene-IY40_RS07785;Dbxref=GenBank:WP_043138348.1;Name=WP_043138348.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019452267.1;locus_tag=IY40_RS07785;product=LysR substrate-binding domain-containing protein;protein_id=WP_043138348.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 214849 215364 . - . ID=gene-IY40_RS07790;Name=IY40_RS07790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS07790;old_locus_tag=IY40_07915 NZ_JPQY01000010.1 Protein Homology CDS 214849 215364 . - 0 ID=cds-WP_043138351.1;Parent=gene-IY40_RS07790;Dbxref=GenBank:WP_043138351.1;Name=WP_043138351.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015378855.1;locus_tag=IY40_RS07790;product=DUF1543 domain-containing protein;protein_id=WP_043138351.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 215485 215667 . + . ID=gene-IY40_RS07795;Name=IY40_RS07795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS07795;old_locus_tag=IY40_07920 NZ_JPQY01000010.1 Protein Homology CDS 215485 215667 . + 0 ID=cds-WP_025303973.1;Parent=gene-IY40_RS07795;Dbxref=GenBank:WP_025303973.1;Name=WP_025303973.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006327415.1;locus_tag=IY40_RS07795;product=YodC family protein;protein_id=WP_025303973.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 215700 215978 . - . ID=gene-IY40_RS07800;Name=IY40_RS07800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS07800;old_locus_tag=IY40_07925 NZ_JPQY01000010.1 Protein Homology CDS 215700 215978 . - 0 ID=cds-WP_025303974.1;Parent=gene-IY40_RS07800;Dbxref=GenBank:WP_025303974.1;Name=WP_025303974.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013814208.1;locus_tag=IY40_RS07800;product=GNAT family N-acetyltransferase;protein_id=WP_025303974.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 215980 216210 . - . ID=gene-IY40_RS07805;Name=IY40_RS07805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS07805;old_locus_tag=IY40_07930 NZ_JPQY01000010.1 Protein Homology CDS 215980 216210 . - 0 ID=cds-WP_025303975.1;Parent=gene-IY40_RS07805;Dbxref=GenBank:WP_025303975.1;Name=WP_025303975.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020078004.1;locus_tag=IY40_RS07805;product=(4Fe-4S)-binding protein;protein_id=WP_025303975.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 216403 216816 . + . ID=gene-IY40_RS07810;Name=IY40_RS07810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS07810;old_locus_tag=IY40_07935 NZ_JPQY01000010.1 Protein Homology CDS 216403 216816 . + 0 ID=cds-WP_016929826.1;Parent=gene-IY40_RS07810;Dbxref=GenBank:WP_016929826.1;Name=WP_016929826.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006318525.1;locus_tag=IY40_RS07810;product=DoxX family protein;protein_id=WP_016929826.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 216867 217439 . - . ID=gene-IY40_RS07815;Name=smrA;gbkey=Gene;gene=smrA;gene_biotype=protein_coding;locus_tag=IY40_RS07815;old_locus_tag=IY40_07940 NZ_JPQY01000010.1 Protein Homology CDS 216867 217439 . - 0 ID=cds-WP_043138356.1;Parent=gene-IY40_RS07815;Dbxref=GenBank:WP_043138356.1;Name=WP_043138356.1;gbkey=CDS;gene=smrA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015378857.1;locus_tag=IY40_RS07815;product=DNA endonuclease SmrA;protein_id=WP_043138356.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 217624 217959 . + . ID=gene-IY40_RS07820;Name=IY40_RS07820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS07820;old_locus_tag=IY40_07945 NZ_JPQY01000010.1 Protein Homology CDS 217624 217959 . + 0 ID=cds-WP_004928976.1;Parent=gene-IY40_RS07820;Dbxref=GenBank:WP_004928976.1;Name=WP_004928976.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015673500.1;locus_tag=IY40_RS07820;product=MbeD/MobD family mobilization/exclusion protein;protein_id=WP_004928976.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 218027 218473 . + . ID=gene-IY40_RS07825;Name=IY40_RS07825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS07825;old_locus_tag=IY40_07950 NZ_JPQY01000010.1 Protein Homology CDS 218027 218473 . + 0 ID=cds-WP_025303978.1;Parent=gene-IY40_RS07825;Dbxref=GenBank:WP_025303978.1;Name=WP_025303978.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004953697.1;locus_tag=IY40_RS07825;product=DUF1198 family protein;protein_id=WP_025303978.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 218500 218838 . - . ID=gene-IY40_RS07830;Name=IY40_RS07830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS07830;old_locus_tag=IY40_07955 NZ_JPQY01000010.1 Protein Homology CDS 218500 218838 . - 0 ID=cds-WP_025303979.1;Parent=gene-IY40_RS07830;Dbxref=GenBank:WP_025303979.1;Name=WP_025303979.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004959435.1;locus_tag=IY40_RS07830;product=DUF2002 family protein;protein_id=WP_025303979.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 218941 220113 . - . ID=gene-IY40_RS07835;Name=IY40_RS07835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS07835;old_locus_tag=IY40_07960 NZ_JPQY01000010.1 Protein Homology CDS 218941 220113 . - 0 ID=cds-WP_043138362.1;Parent=gene-IY40_RS07835;Dbxref=GenBank:WP_043138362.1;Name=WP_043138362.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016929831.1;locus_tag=IY40_RS07835;product=MFS transporter;protein_id=WP_043138362.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 220204 221109 . - . ID=gene-IY40_RS07840;Name=IY40_RS07840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS07840;old_locus_tag=IY40_07965 NZ_JPQY01000010.1 Protein Homology CDS 220204 221109 . - 0 ID=cds-WP_043138365.1;Parent=gene-IY40_RS07840;Dbxref=GenBank:WP_043138365.1;Name=WP_043138365.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016929832.1;locus_tag=IY40_RS07840;product=LysR family transcriptional regulator;protein_id=WP_043138365.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 221215 222597 . + . ID=gene-IY40_RS07845;Name=IY40_RS07845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS07845;old_locus_tag=IY40_07970 NZ_JPQY01000010.1 Protein Homology CDS 221215 222597 . + 0 ID=cds-WP_043138370.1;Parent=gene-IY40_RS07845;Dbxref=GenBank:WP_043138370.1;Name=WP_043138370.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016929833.1;locus_tag=IY40_RS07845;product=MFS transporter;protein_id=WP_043138370.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 222594 222974 . + . ID=gene-IY40_RS07850;Name=IY40_RS07850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS07850;old_locus_tag=IY40_07975 NZ_JPQY01000010.1 Protein Homology CDS 222594 222974 . + 0 ID=cds-WP_043138374.1;Parent=gene-IY40_RS07850;Dbxref=GenBank:WP_043138374.1;Name=WP_043138374.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017893759.1;locus_tag=IY40_RS07850;product=DUF4440 domain-containing protein;protein_id=WP_043138374.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 223170 223520 . - . ID=gene-IY40_RS07855;Name=asr;gbkey=Gene;gene=asr;gene_biotype=protein_coding;locus_tag=IY40_RS07855;old_locus_tag=IY40_07985 NZ_JPQY01000010.1 Protein Homology CDS 223170 223520 . - 0 ID=cds-WP_004928953.1;Parent=gene-IY40_RS07855;Dbxref=GenBank:WP_004928953.1;Name=WP_004928953.1;gbkey=CDS;gene=asr;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004928953.1;locus_tag=IY40_RS07855;product=acid resistance repetitive basic protein Asr;protein_id=WP_004928953.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 223750 224058 . + . ID=gene-IY40_RS07860;Name=IY40_RS07860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS07860;old_locus_tag=IY40_07990 NZ_JPQY01000010.1 Protein Homology CDS 223750 224058 . + 0 ID=cds-WP_004928950.1;Parent=gene-IY40_RS07860;Dbxref=GenBank:WP_004928950.1;Name=WP_004928950.1;Ontology_term=GO:0043022,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=ribosome binding|0043022||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019455574.1;locus_tag=IY40_RS07860;product=DUF883 family protein;protein_id=WP_004928950.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 224126 225550 . - . ID=gene-IY40_RS07865;Name=pdxR;gbkey=Gene;gene=pdxR;gene_biotype=protein_coding;locus_tag=IY40_RS07865;old_locus_tag=IY40_07995 NZ_JPQY01000010.1 Protein Homology CDS 224126 225550 . - 0 ID=cds-WP_043138379.1;Parent=gene-IY40_RS07865;Dbxref=GenBank:WP_043138379.1;Name=WP_043138379.1;Ontology_term=GO:0042823,GO:2000142,GO:0070279;gbkey=CDS;gene=pdxR;go_function=vitamin B6 binding|0070279||IEA;go_process=pyridoxal phosphate biosynthetic process|0042823||IEA,regulation of DNA-templated transcription initiation|2000142||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015378863.1;locus_tag=IY40_RS07865;product=MocR-like pyridoxine biosynthesis transcription factor PdxR;protein_id=WP_043138379.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 225646 226077 . + . ID=gene-IY40_RS07870;Name=IY40_RS07870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS07870;old_locus_tag=IY40_08000 NZ_JPQY01000010.1 Protein Homology CDS 225646 226077 . + 0 ID=cds-WP_025303985.1;Parent=gene-IY40_RS07870;Dbxref=GenBank:WP_025303985.1;Name=WP_025303985.1;Ontology_term=GO:0051920;gbkey=CDS;go_function=peroxiredoxin activity|0051920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006318553.1;locus_tag=IY40_RS07870;product=carboxymuconolactone decarboxylase family protein;protein_id=WP_025303985.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 226350 226580 . + . ID=gene-IY40_RS07875;Name=nrdH;gbkey=Gene;gene=nrdH;gene_biotype=protein_coding;locus_tag=IY40_RS07875;old_locus_tag=IY40_08005 NZ_JPQY01000010.1 Protein Homology CDS 226350 226580 . + 0 ID=cds-WP_004928934.1;Parent=gene-IY40_RS07875;Dbxref=GenBank:WP_004928934.1;Name=WP_004928934.1;Ontology_term=GO:0045454;gbkey=CDS;gene=nrdH;go_process=cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004928934.1;locus_tag=IY40_RS07875;product=glutaredoxin-like protein NrdH;protein_id=WP_004928934.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 226590 226994 . + . ID=gene-IY40_RS07880;Name=nrdI;gbkey=Gene;gene=nrdI;gene_biotype=protein_coding;locus_tag=IY40_RS07880;old_locus_tag=IY40_08010 NZ_JPQY01000010.1 Protein Homology CDS 226590 226994 . + 0 ID=cds-WP_004928930.1;Parent=gene-IY40_RS07880;Dbxref=GenBank:WP_004928930.1;Name=WP_004928930.1;Ontology_term=GO:0009263,GO:0036211,GO:0010181;gbkey=CDS;gene=nrdI;go_function=FMN binding|0010181||IEA;go_process=deoxyribonucleotide biosynthetic process|0009263||IEA,protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012146428.1;locus_tag=IY40_RS07880;product=class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI;protein_id=WP_004928930.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 226976 229120 . + . ID=gene-IY40_RS07885;Name=nrdE;gbkey=Gene;gene=nrdE;gene_biotype=protein_coding;locus_tag=IY40_RS07885;old_locus_tag=IY40_08015 NZ_JPQY01000010.1 Protein Homology CDS 226976 229120 . + 0 ID=cds-WP_071845116.1;Parent=gene-IY40_RS07885;Dbxref=GenBank:WP_071845116.1;Name=WP_071845116.1;Ontology_term=GO:0006260,GO:0004748,GO:0005524;gbkey=CDS;gene=nrdE;go_function=ribonucleoside-diphosphate reductase activity%2C thioredoxin disulfide as acceptor|0004748||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005176973.1;locus_tag=IY40_RS07885;product=class 1b ribonucleoside-diphosphate reductase subunit alpha;protein_id=WP_071845116.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 229129 230100 . + . ID=gene-IY40_RS07890;Name=nrdF;gbkey=Gene;gene=nrdF;gene_biotype=protein_coding;locus_tag=IY40_RS07890;old_locus_tag=IY40_08020 NZ_JPQY01000010.1 Protein Homology CDS 229129 230100 . + 0 ID=cds-WP_033639549.1;Parent=gene-IY40_RS07890;Dbxref=GenBank:WP_033639549.1;Name=WP_033639549.1;Ontology_term=GO:0009263,GO:0004748,GO:0005971;gbkey=CDS;gene=nrdF;go_component=ribonucleoside-diphosphate reductase complex|0005971||IEA;go_function=ribonucleoside-diphosphate reductase activity%2C thioredoxin disulfide as acceptor|0004748||IEA;go_process=deoxyribonucleotide biosynthetic process|0009263||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013814223.1;locus_tag=IY40_RS07890;product=class 1b ribonucleoside-diphosphate reductase subunit beta;protein_id=WP_033639549.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 230144 230431 . - . ID=gene-IY40_RS07895;Name=IY40_RS07895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS07895;old_locus_tag=IY40_08025 NZ_JPQY01000010.1 Protein Homology CDS 230144 230431 . - 0 ID=cds-WP_043138388.1;Parent=gene-IY40_RS07895;Dbxref=GenBank:WP_043138388.1;Name=WP_043138388.1;Ontology_term=GO:0090729,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=toxin activity|0090729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006318559.1;locus_tag=IY40_RS07895;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_043138388.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 230431 230718 . - . ID=gene-IY40_RS07900;Name=IY40_RS07900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS07900;old_locus_tag=IY40_08030 NZ_JPQY01000010.1 Protein Homology CDS 230431 230718 . - 0 ID=cds-WP_038872812.1;Parent=gene-IY40_RS07900;Dbxref=GenBank:WP_038872812.1;Name=WP_038872812.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016929838.1;locus_tag=IY40_RS07900;product=CopG family ribbon-helix-helix protein;protein_id=WP_038872812.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 230796 230990 . - . ID=gene-IY40_RS07905;Name=IY40_RS07905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS07905;old_locus_tag=IY40_08035 NZ_JPQY01000010.1 Protein Homology CDS 230796 230990 . - 0 ID=cds-WP_043138399.1;Parent=gene-IY40_RS07905;Dbxref=GenBank:WP_043138399.1;Name=WP_043138399.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015378867.1;locus_tag=IY40_RS07905;product=DUF1289 domain-containing protein;protein_id=WP_043138399.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 231055 231795 . - . ID=gene-IY40_RS07910;Name=IY40_RS07910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS07910;old_locus_tag=IY40_08040 NZ_JPQY01000010.1 Protein Homology CDS 231055 231795 . - 0 ID=cds-WP_025303991.1;Parent=gene-IY40_RS07910;Dbxref=GenBank:WP_025303991.1;Name=WP_025303991.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019455580.1;locus_tag=IY40_RS07910;product=SDR family oxidoreductase;protein_id=WP_025303991.1;transl_table=11 NZ_JPQY01000010.1 RefSeq gene 231949 232875 . - . ID=gene-IY40_RS07915;Name=IY40_RS07915;end_range=232875,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS07915;old_locus_tag=IY40_08045;partial=true NZ_JPQY01000010.1 Protein Homology CDS 231949 232875 . - 0 ID=cds-WP_043138403.1;Parent=gene-IY40_RS07915;Dbxref=GenBank:WP_043138403.1;Name=WP_043138403.1;Ontology_term=GO:0016787,GO:0046872;end_range=232875,.;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815093.1;locus_tag=IY40_RS07915;partial=true;product=MBL fold metallo-hydrolase;protein_id=WP_043138403.1;transl_table=11 ##sequence-region NZ_JPQY01000011.1 1 211921 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=615 NZ_JPQY01000011.1 RefSeq region 1 211921 . + . ID=NZ_JPQY01000011.1:1..211921;Dbxref=taxon:615;collected-by=Mahloro H. Serepa%3B Vincent M. Gray;collection-date=2013-04-11;country=South Africa: North West Province;gbkey=Src;genome=genomic;identified-by=Mahloro H. Serepa%3B Vincent M. Gray;isolation-source=entomopathogenic nematode Oscheius sp. MCB living in soil;mol_type=genomic DNA;nat-host=Oscheius sp. MCB;strain=MCB NZ_JPQY01000011.1 RefSeq gene 200 1600 . + . ID=gene-IY40_RS07920;Name=IY40_RS07920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS07920;old_locus_tag=IY40_08050 NZ_JPQY01000011.1 Protein Homology CDS 200 1600 . + 0 ID=cds-WP_016927376.1;Parent=gene-IY40_RS07920;Dbxref=GenBank:WP_016927376.1;Name=WP_016927376.1;Ontology_term=GO:0009055,GO:0046872,GO:0016020,GO:0070069;gbkey=CDS;go_component=membrane|0016020||IEA,cytochrome complex|0070069||IEA;go_function=electron transfer activity|0009055||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013813396.1;locus_tag=IY40_RS07920;product=cytochrome ubiquinol oxidase subunit I;protein_id=WP_016927376.1;transl_table=11 NZ_JPQY01000011.1 RefSeq gene 1603 2610 . + . ID=gene-IY40_RS07925;Name=cydB;gbkey=Gene;gene=cydB;gene_biotype=protein_coding;locus_tag=IY40_RS07925;old_locus_tag=IY40_08055 NZ_JPQY01000011.1 Protein Homology CDS 1603 2610 . + 0 ID=cds-WP_025303188.1;Parent=gene-IY40_RS07925;Dbxref=GenBank:WP_025303188.1;Name=WP_025303188.1;Ontology_term=GO:0016682;gbkey=CDS;gene=cydB;go_function=oxidoreductase activity%2C acting on diphenols and related substances as donors%2C oxygen as acceptor|0016682||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004961716.1;locus_tag=IY40_RS07925;product=cytochrome d ubiquinol oxidase subunit II;protein_id=WP_025303188.1;transl_table=11 NZ_JPQY01000011.1 RefSeq gene 2625 2777 . + . ID=gene-IY40_RS25160;Name=IY40_RS25160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS25160 NZ_JPQY01000011.1 Protein Homology CDS 2625 2777 . + 0 ID=cds-WP_071605360.1;Parent=gene-IY40_RS25160;Dbxref=GenBank:WP_071605360.1;Name=WP_071605360.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004934619.1;locus_tag=IY40_RS25160;product=DUF2474 domain-containing protein;protein_id=WP_071605360.1;transl_table=11 NZ_JPQY01000011.1 RefSeq gene 2787 3053 . - . ID=gene-IY40_RS07930;Name=IY40_RS07930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS07930;old_locus_tag=IY40_08065 NZ_JPQY01000011.1 Protein Homology CDS 2787 3053 . - 0 ID=cds-WP_033643416.1;Parent=gene-IY40_RS07930;Dbxref=GenBank:WP_033643416.1;Name=WP_033643416.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015378181.1;locus_tag=IY40_RS07930;product=hypothetical protein;protein_id=WP_033643416.1;transl_table=11 NZ_JPQY01000011.1 RefSeq gene 3050 3274 . - . ID=gene-IY40_RS07935;Name=IY40_RS07935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS07935;old_locus_tag=IY40_08070 NZ_JPQY01000011.1 Protein Homology CDS 3050 3274 . - 0 ID=cds-WP_025303190.1;Parent=gene-IY40_RS07935;Dbxref=GenBank:WP_025303190.1;Name=WP_025303190.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013813399.1;locus_tag=IY40_RS07935;product=hypothetical protein;protein_id=WP_025303190.1;transl_table=11 NZ_JPQY01000011.1 RefSeq gene 3381 4466 . - . ID=gene-IY40_RS07940;Name=IY40_RS07940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS07940;old_locus_tag=IY40_08075 NZ_JPQY01000011.1 Protein Homology CDS 3381 4466 . - 0 ID=cds-WP_043138502.1;Parent=gene-IY40_RS07940;Dbxref=GenBank:WP_043138502.1;Name=WP_043138502.1;Ontology_term=GO:0006633,GO:0016717,GO:0046872,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=oxidoreductase activity%2C acting on paired donors%2C with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water|0016717||IEA,metal ion binding|0046872||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004934625.1;locus_tag=IY40_RS07940;product=acyl-CoA desaturase;protein_id=WP_043138502.1;transl_table=11 NZ_JPQY01000011.1 RefSeq gene 4463 5545 . - . ID=gene-IY40_RS07945;Name=IY40_RS07945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS07945;old_locus_tag=IY40_08080 NZ_JPQY01000011.1 Protein Homology CDS 4463 5545 . - 0 ID=cds-WP_043138505.1;Parent=gene-IY40_RS07945;Dbxref=GenBank:WP_043138505.1;Name=WP_043138505.1;Ontology_term=GO:0006633,GO:0016717,GO:0046872,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=oxidoreductase activity%2C acting on paired donors%2C with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water|0016717||IEA,metal ion binding|0046872||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017893147.1;locus_tag=IY40_RS07945;product=fatty acid desaturase family protein;protein_id=WP_043138505.1;transl_table=11 NZ_JPQY01000011.1 RefSeq gene 5538 6671 . - . ID=gene-IY40_RS07950;Name=IY40_RS07950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS07950;old_locus_tag=IY40_08085 NZ_JPQY01000011.1 Protein Homology CDS 5538 6671 . - 0 ID=cds-WP_025303193.1;Parent=gene-IY40_RS07950;Dbxref=GenBank:WP_025303193.1;Name=WP_025303193.1;Ontology_term=GO:0006629,GO:0008610,GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;go_process=lipid metabolic process|0006629||IEA,lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015378185.1;locus_tag=IY40_RS07950;product=sterol desaturase family protein;protein_id=WP_025303193.1;transl_table=11 NZ_JPQY01000011.1 RefSeq gene 6668 7285 . - . ID=gene-IY40_RS07955;Name=IY40_RS07955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS07955;old_locus_tag=IY40_08090 NZ_JPQY01000011.1 Protein Homology CDS 6668 7285 . - 0 ID=cds-WP_025303194.1;Parent=gene-IY40_RS07955;Dbxref=GenBank:WP_025303194.1;Name=WP_025303194.1;Ontology_term=GO:0008610;gbkey=CDS;go_process=lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019452878.1;locus_tag=IY40_RS07955;product=phosphatase PAP2 family protein;protein_id=WP_025303194.1;transl_table=11 NZ_JPQY01000011.1 RefSeq gene 7282 8568 . - . ID=gene-IY40_RS07960;Name=IY40_RS07960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS07960;old_locus_tag=IY40_08095 NZ_JPQY01000011.1 Protein Homology CDS 7282 8568 . - 0 ID=cds-WP_043138510.1;Parent=gene-IY40_RS07960;Dbxref=GenBank:WP_043138510.1;Name=WP_043138510.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011091755.1;locus_tag=IY40_RS07960;product=F390 synthetase-related protein;protein_id=WP_043138510.1;transl_table=11 NZ_JPQY01000011.1 RefSeq gene 8565 9371 . - . ID=gene-IY40_RS07965;Name=IY40_RS07965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS07965;old_locus_tag=IY40_08100 NZ_JPQY01000011.1 Protein Homology CDS 8565 9371 . - 0 ID=cds-WP_043138513.1;Parent=gene-IY40_RS07965;Dbxref=GenBank:WP_043138513.1;Name=WP_043138513.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002214335.1;locus_tag=IY40_RS07965;product=MBL fold metallo-hydrolase;protein_id=WP_043138513.1;transl_table=11 NZ_JPQY01000011.1 RefSeq gene 9364 10380 . - . ID=gene-IY40_RS07970;Name=IY40_RS07970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS07970;old_locus_tag=IY40_08105 NZ_JPQY01000011.1 Protein Homology CDS 9364 10380 . - 0 ID=cds-WP_043138518.1;Parent=gene-IY40_RS07970;Dbxref=GenBank:WP_043138518.1;Name=WP_043138518.1;Ontology_term=GO:0016491,GO:0051287,GO:0070403;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD binding|0051287||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211275.1;locus_tag=IY40_RS07970;product=NAD-dependent epimerase/dehydratase family protein;protein_id=WP_043138518.1;transl_table=11 NZ_JPQY01000011.1 RefSeq gene 10377 11384 . - . ID=gene-IY40_RS07975;Name=IY40_RS07975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS07975;old_locus_tag=IY40_08110 NZ_JPQY01000011.1 Protein Homology CDS 10377 11384 . - 0 ID=cds-WP_025303198.1;Parent=gene-IY40_RS07975;Dbxref=GenBank:WP_025303198.1;Name=WP_025303198.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004934639.1;locus_tag=IY40_RS07975;product=3-oxoacyl-[acyl-carrier-protein] synthase III C-terminal domain-containing protein;protein_id=WP_025303198.1;transl_table=11 NZ_JPQY01000011.1 RefSeq gene 11658 12335 . - . ID=gene-IY40_RS07980;Name=narI;gbkey=Gene;gene=narI;gene_biotype=protein_coding;locus_tag=IY40_RS07980;old_locus_tag=IY40_08115 NZ_JPQY01000011.1 Protein Homology CDS 11658 12335 . - 0 ID=cds-WP_043138522.1;Parent=gene-IY40_RS07980;Dbxref=GenBank:WP_043138522.1;Name=WP_043138522.1;Ontology_term=GO:0019645,GO:0008940,GO:0009325;gbkey=CDS;gene=narI;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=anaerobic electron transport chain|0019645||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227506.1;locus_tag=IY40_RS07980;product=respiratory nitrate reductase subunit gamma;protein_id=WP_043138522.1;transl_table=11 NZ_JPQY01000011.1 RefSeq gene 12338 13060 . - . ID=gene-IY40_RS07985;Name=narJ;gbkey=Gene;gene=narJ;gene_biotype=protein_coding;locus_tag=IY40_RS07985;old_locus_tag=IY40_08120 NZ_JPQY01000011.1 Protein Homology CDS 12338 13060 . - 0 ID=cds-WP_025303200.1;Parent=gene-IY40_RS07985;Dbxref=GenBank:WP_025303200.1;Name=WP_025303200.1;Ontology_term=GO:0051131,GO:0051082;gbkey=CDS;gene=narJ;go_function=unfolded protein binding|0051082||IEA;go_process=chaperone-mediated protein complex assembly|0051131||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015378191.1;locus_tag=IY40_RS07985;product=nitrate reductase molybdenum cofactor assembly chaperone;protein_id=WP_025303200.1;transl_table=11 NZ_JPQY01000011.1 RefSeq gene 13057 14601 . - . ID=gene-IY40_RS07990;Name=narH;gbkey=Gene;gene=narH;gene_biotype=protein_coding;locus_tag=IY40_RS07990;old_locus_tag=IY40_08125 NZ_JPQY01000011.1 Protein Homology CDS 13057 14601 . - 0 ID=cds-WP_025303201.1;Parent=gene-IY40_RS07990;Dbxref=GenBank:WP_025303201.1;Name=WP_025303201.1;Ontology_term=GO:0042126,GO:0008940,GO:0009325;gbkey=CDS;gene=narH;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=nitrate metabolic process|0042126||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010248525.1;locus_tag=IY40_RS07990;product=nitrate reductase subunit beta;protein_id=WP_025303201.1;transl_table=11 NZ_JPQY01000011.1 RefSeq gene 14598 18359 . - . ID=gene-IY40_RS07995;Name=IY40_RS07995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS07995;old_locus_tag=IY40_08130 NZ_JPQY01000011.1 Protein Homology CDS 14598 18359 . - 0 ID=cds-WP_025303202.1;Parent=gene-IY40_RS07995;Dbxref=GenBank:WP_025303202.1;Name=WP_025303202.1;Ontology_term=GO:0042126,GO:0008940,GO:0009325;gbkey=CDS;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=nitrate metabolic process|0042126||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013813411.1;locus_tag=IY40_RS07995;product=nitrate reductase subunit alpha;protein_id=WP_025303202.1;transl_table=11 NZ_JPQY01000011.1 RefSeq gene 18652 20511 . - . ID=gene-IY40_RS08000;Name=IY40_RS08000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS08000;old_locus_tag=IY40_08135 NZ_JPQY01000011.1 Protein Homology CDS 18652 20511 . - 0 ID=cds-WP_043138527.1;Parent=gene-IY40_RS08000;Dbxref=GenBank:WP_043138527.1;Name=WP_043138527.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016927359.1;locus_tag=IY40_RS08000;product=carbohydrate binding domain-containing protein;protein_id=WP_043138527.1;transl_table=11 NZ_JPQY01000011.1 RefSeq gene 20523 21266 . - . ID=gene-IY40_RS08005;Name=IY40_RS08005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS08005;old_locus_tag=IY40_08140 NZ_JPQY01000011.1 Protein Homology CDS 20523 21266 . - 0 ID=cds-WP_038876984.1;Parent=gene-IY40_RS08005;Dbxref=GenBank:WP_038876984.1;Name=WP_038876984.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004945805.1;locus_tag=IY40_RS08005;product=glycosyltransferase family 2 protein;protein_id=WP_038876984.1;transl_table=11 NZ_JPQY01000011.1 RefSeq gene 21274 22329 . - . ID=gene-IY40_RS08010;Name=IY40_RS08010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS08010;old_locus_tag=IY40_08145 NZ_JPQY01000011.1 Protein Homology CDS 21274 22329 . - 0 ID=cds-WP_043138535.1;Parent=gene-IY40_RS08010;Dbxref=GenBank:WP_043138535.1;Name=WP_043138535.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004934660.1;locus_tag=IY40_RS08010;product=glycosyltransferase family 4 protein;protein_id=WP_043138535.1;transl_table=11 NZ_JPQY01000011.1 RefSeq gene 22331 23236 . - . ID=gene-IY40_RS08015;Name=IY40_RS08015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS08015;old_locus_tag=IY40_08150 NZ_JPQY01000011.1 Protein Homology CDS 22331 23236 . - 0 ID=cds-WP_025303206.1;Parent=gene-IY40_RS08015;Dbxref=GenBank:WP_025303206.1;Name=WP_025303206.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019452889.1;locus_tag=IY40_RS08015;product=glycosyltransferase family 2 protein;protein_id=WP_025303206.1;transl_table=11 NZ_JPQY01000011.1 RefSeq gene 23240 24394 . - . ID=gene-IY40_RS08020;Name=IY40_RS08020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS08020;old_locus_tag=IY40_08155 NZ_JPQY01000011.1 Protein Homology CDS 23240 24394 . - 0 ID=cds-WP_043138539.1;Parent=gene-IY40_RS08020;Dbxref=GenBank:WP_043138539.1;Name=WP_043138539.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015378197.1;locus_tag=IY40_RS08020;product=hypothetical protein;protein_id=WP_043138539.1;transl_table=11 NZ_JPQY01000011.1 RefSeq gene 24401 25249 . - . ID=gene-IY40_RS08025;Name=IY40_RS08025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS08025;old_locus_tag=IY40_08160 NZ_JPQY01000011.1 Protein Homology CDS 24401 25249 . - 0 ID=cds-WP_025303208.1;Parent=gene-IY40_RS08025;Dbxref=GenBank:WP_025303208.1;Name=WP_025303208.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015378198.1;locus_tag=IY40_RS08025;product=ATP-grasp fold amidoligase family protein;protein_id=WP_025303208.1;transl_table=11 NZ_JPQY01000011.1 RefSeq gene 25230 26528 . - . ID=gene-IY40_RS08030;Name=IY40_RS08030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS08030;old_locus_tag=IY40_08165 NZ_JPQY01000011.1 Protein Homology CDS 25230 26528 . - 0 ID=cds-WP_043138544.1;Parent=gene-IY40_RS08030;Dbxref=GenBank:WP_043138544.1;Name=WP_043138544.1;Ontology_term=GO:0140327,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=flippase activity|0140327||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004934664.1;locus_tag=IY40_RS08030;product=flippase;protein_id=WP_043138544.1;transl_table=11 NZ_JPQY01000011.1 RefSeq gene 26533 28716 . - . ID=gene-IY40_RS08035;Name=IY40_RS08035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS08035;old_locus_tag=IY40_08170 NZ_JPQY01000011.1 Protein Homology CDS 26533 28716 . - 0 ID=cds-WP_043138547.1;Parent=gene-IY40_RS08035;Dbxref=GenBank:WP_043138547.1;Name=WP_043138547.1;Ontology_term=GO:0000271;gbkey=CDS;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016927353.1;locus_tag=IY40_RS08035;product=polysaccharide biosynthesis tyrosine autokinase;protein_id=WP_043138547.1;transl_table=11 NZ_JPQY01000011.1 RefSeq gene 28744 29877 . - . ID=gene-IY40_RS08040;Name=IY40_RS08040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS08040;old_locus_tag=IY40_08175 NZ_JPQY01000011.1 Protein Homology CDS 28744 29877 . - 0 ID=cds-WP_043138552.1;Parent=gene-IY40_RS08040;Dbxref=GenBank:WP_043138552.1;Name=WP_043138552.1;Ontology_term=GO:0015774,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=polysaccharide transport|0015774||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006321506.1;locus_tag=IY40_RS08040;product=polysaccharide export protein;protein_id=WP_043138552.1;transl_table=11 NZ_JPQY01000011.1 RefSeq gene 29923 30972 . - . ID=gene-IY40_RS08045;Name=wecA;gbkey=Gene;gene=wecA;gene_biotype=protein_coding;locus_tag=IY40_RS08045;old_locus_tag=IY40_08180 NZ_JPQY01000011.1 Protein Homology CDS 29923 30972 . - 0 ID=cds-WP_025303212.1;Parent=gene-IY40_RS08045;Dbxref=GenBank:WP_025303212.1;Name=WP_025303212.1;Ontology_term=GO:0009103,GO:0009246,GO:0000287,GO:0016780,GO:0030145,GO:0036380,GO:0009276,GO:0016020;gbkey=CDS;gene=wecA;go_component=Gram-negative-bacterium-type cell wall|0009276||IEA,membrane|0016020||IEA;go_function=magnesium ion binding|0000287||IEA,phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA,manganese ion binding|0030145||IEA,UDP-N-acetylglucosamine-undecaprenyl-phosphate N-acetylglucosaminephosphotransferase activity|0036380||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA,enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006326045.1;locus_tag=IY40_RS08045;product=UDP-N-acetylglucosamine--undecaprenyl-phosphate N-acetylglucosaminephosphotransferase;protein_id=WP_025303212.1;transl_table=11 NZ_JPQY01000011.1 RefSeq gene 31147 32109 . - . ID=gene-IY40_RS08050;Name=IY40_RS08050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS08050;old_locus_tag=IY40_08185 NZ_JPQY01000011.1 Protein Homology CDS 31147 32109 . - 0 ID=cds-WP_025303213.1;Parent=gene-IY40_RS08050;Dbxref=GenBank:WP_025303213.1;Name=WP_025303213.1;Ontology_term=GO:0016491,GO:0051287,GO:0070403;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD binding|0051287||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004934674.1;locus_tag=IY40_RS08050;product=NAD-dependent epimerase/dehydratase family protein;protein_id=WP_025303213.1;transl_table=11 NZ_JPQY01000011.1 RefSeq gene 32290 33189 . - . ID=gene-IY40_RS08055;Name=IY40_RS08055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS08055;old_locus_tag=IY40_08190 NZ_JPQY01000011.1 Protein Homology CDS 32290 33189 . - 0 ID=cds-WP_043138557.1;Parent=gene-IY40_RS08055;Dbxref=GenBank:WP_043138557.1;Name=WP_043138557.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006326046.1;locus_tag=IY40_RS08055;product=winged helix-turn-helix domain-containing protein;protein_id=WP_043138557.1;transl_table=11 NZ_JPQY01000011.1 RefSeq gene 33962 35356 . - . ID=gene-IY40_RS08060;Name=IY40_RS08060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS08060;old_locus_tag=IY40_08195 NZ_JPQY01000011.1 Protein Homology CDS 33962 35356 . - 0 ID=cds-WP_025303214.1;Parent=gene-IY40_RS08060;Dbxref=GenBank:WP_025303214.1;Name=WP_025303214.1;Ontology_term=GO:0015706,GO:0015707,GO:0015112,GO:0015113,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=nitrate transmembrane transporter activity|0015112||IEA,nitrite transmembrane transporter activity|0015113||IEA;go_process=nitrate transmembrane transport|0015706||IEA,nitrite transport|0015707||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004934679.1;locus_tag=IY40_RS08060;product=NarK family nitrate/nitrite MFS transporter;protein_id=WP_025303214.1;transl_table=11 NZ_JPQY01000011.1 RefSeq gene 35707 37491 . + . ID=gene-IY40_RS08065;Name=narX;gbkey=Gene;gene=narX;gene_biotype=protein_coding;locus_tag=IY40_RS08065;old_locus_tag=IY40_08200 NZ_JPQY01000011.1 Protein Homology CDS 35707 37491 . + 0 ID=cds-WP_043138561.1;Parent=gene-IY40_RS08065;Dbxref=GenBank:WP_043138561.1;Name=WP_043138561.1;Ontology_term=GO:0000160,GO:0000155,GO:0046983,GO:0016020;gbkey=CDS;gene=narX;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein dimerization activity|0046983||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004945839.1;locus_tag=IY40_RS08065;product=nitrate/nitrite two-component system sensor histidine kinase NarX;protein_id=WP_043138561.1;transl_table=11 NZ_JPQY01000011.1 RefSeq gene 37502 38152 . + . ID=gene-IY40_RS08070;Name=narL;gbkey=Gene;gene=narL;gene_biotype=protein_coding;locus_tag=IY40_RS08070;old_locus_tag=IY40_08205 NZ_JPQY01000011.1 Protein Homology CDS 37502 38152 . + 0 ID=cds-WP_043138564.1;Parent=gene-IY40_RS08070;Dbxref=GenBank:WP_043138564.1;Name=WP_043138564.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=narL;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006321500.1;locus_tag=IY40_RS08070;product=two-component system response regulator NarL;protein_id=WP_043138564.1;transl_table=11 NZ_JPQY01000011.1 RefSeq gene 38149 39648 . - . ID=gene-IY40_RS08075;Name=IY40_RS08075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS08075;old_locus_tag=IY40_08210 NZ_JPQY01000011.1 Protein Homology CDS 38149 39648 . - 0 ID=cds-WP_043138566.1;Parent=gene-IY40_RS08075;Dbxref=GenBank:WP_043138566.1;Name=WP_043138566.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013813429.1;locus_tag=IY40_RS08075;product=YchO/YchP family invasin;protein_id=WP_043138566.1;transl_table=11 NZ_JPQY01000011.1 RefSeq gene 40079 40747 . + . ID=gene-IY40_RS08080;Name=IY40_RS08080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS08080;old_locus_tag=IY40_08220 NZ_JPQY01000011.1 Protein Homology CDS 40079 40747 . + 0 ID=cds-WP_025303218.1;Parent=gene-IY40_RS08080;Dbxref=GenBank:WP_025303218.1;Name=WP_025303218.1;Ontology_term=GO:0004190,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=aspartic-type endopeptidase activity|0004190||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004934697.1;locus_tag=IY40_RS08080;product=prepilin peptidase;protein_id=WP_025303218.1;transl_table=11 NZ_JPQY01000011.1 RefSeq gene 40744 42354 . - . ID=gene-IY40_RS08085;Name=IY40_RS08085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS08085;old_locus_tag=IY40_08225 NZ_JPQY01000011.1 Protein Homology CDS 40744 42354 . - 0 ID=cds-WP_043138569.1;Parent=gene-IY40_RS08085;Dbxref=GenBank:WP_043138569.1;Name=WP_043138569.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004934698.1;locus_tag=IY40_RS08085;product=hypothetical protein;protein_id=WP_043138569.1;transl_table=11 NZ_JPQY01000011.1 RefSeq gene 42586 44160 . - . ID=gene-IY40_RS08090;Name=IY40_RS08090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS08090;old_locus_tag=IY40_08230 NZ_JPQY01000011.1 Protein Homology CDS 42586 44160 . - 0 ID=cds-WP_043138571.1;Parent=gene-IY40_RS08090;Dbxref=GenBank:WP_043138571.1;Name=WP_043138571.1;Ontology_term=GO:0005524,GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013813439.1;locus_tag=IY40_RS08090;product=ABC transporter substrate-binding protein;protein_id=WP_043138571.1;transl_table=11 NZ_JPQY01000011.1 RefSeq gene 44293 44964 . - . ID=gene-IY40_RS08095;Name=IY40_RS08095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS08095;old_locus_tag=IY40_08235 NZ_JPQY01000011.1 Protein Homology CDS 44293 44964 . - 0 ID=cds-WP_043138574.1;Parent=gene-IY40_RS08095;Dbxref=GenBank:WP_043138574.1;Name=WP_043138574.1;Ontology_term=GO:0005524,GO:0016887,GO:0022857,GO:0042626,GO:0140359,GO:0043190;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,transmembrane transporter activity|0022857||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015378211.1;locus_tag=IY40_RS08095;product=ABC transporter ATP-binding protein;protein_id=WP_043138574.1;transl_table=11 NZ_JPQY01000011.1 RefSeq gene 44961 45803 . - . ID=gene-IY40_RS08100;Name=IY40_RS08100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS08100;old_locus_tag=IY40_08240 NZ_JPQY01000011.1 Protein Homology CDS 44961 45803 . - 0 ID=cds-WP_025303222.1;Parent=gene-IY40_RS08100;Dbxref=GenBank:WP_025303222.1;Name=WP_025303222.1;Ontology_term=GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004934707.1;locus_tag=IY40_RS08100;product=ABC transporter ATP-binding protein;protein_id=WP_025303222.1;transl_table=11 NZ_JPQY01000011.1 RefSeq gene 45793 46662 . - . ID=gene-IY40_RS08105;Name=IY40_RS08105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS08105;old_locus_tag=IY40_08245 NZ_JPQY01000011.1 Protein Homology CDS 45793 46662 . - 0 ID=cds-WP_043138576.1;Parent=gene-IY40_RS08105;Dbxref=GenBank:WP_043138576.1;Name=WP_043138576.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006321338.1;locus_tag=IY40_RS08105;product=ABC transporter permease;protein_id=WP_043138576.1;transl_table=11 NZ_JPQY01000011.1 RefSeq gene 46659 47714 . - . ID=gene-IY40_RS08110;Name=IY40_RS08110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS08110;old_locus_tag=IY40_08250 NZ_JPQY01000011.1 Protein Homology CDS 46659 47714 . - 0 ID=cds-WP_025303223.1;Parent=gene-IY40_RS08110;Dbxref=GenBank:WP_025303223.1;Name=WP_025303223.1;Ontology_term=GO:0055085;gbkey=CDS;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019452909.1;locus_tag=IY40_RS08110;product=ABC transporter permease;protein_id=WP_025303223.1;transl_table=11 NZ_JPQY01000011.1 RefSeq gene 47714 49282 . - . ID=gene-IY40_RS08115;Name=IY40_RS08115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS08115;old_locus_tag=IY40_08255 NZ_JPQY01000011.1 Protein Homology CDS 47714 49282 . - 0 ID=cds-WP_043138578.1;Parent=gene-IY40_RS08115;Dbxref=GenBank:WP_043138578.1;Name=WP_043138578.1;Ontology_term=GO:0005524,GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016927337.1;locus_tag=IY40_RS08115;product=ABC transporter substrate-binding protein;protein_id=WP_043138578.1;transl_table=11 NZ_JPQY01000011.1 RefSeq gene 49458 50411 . - . ID=gene-IY40_RS08120;Name=cbl;gbkey=Gene;gene=cbl;gene_biotype=protein_coding;locus_tag=IY40_RS08120;old_locus_tag=IY40_08260 NZ_JPQY01000011.1 Protein Homology CDS 49458 50411 . - 0 ID=cds-WP_033634950.1;Parent=gene-IY40_RS08120;Dbxref=GenBank:WP_033634950.1;Name=WP_033634950.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=cbl;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006321346.1;locus_tag=IY40_RS08120;product=HTH-type transcriptional regulator Cbl;protein_id=WP_033634950.1;transl_table=11 NZ_JPQY01000011.1 RefSeq gene 50712 51407 . - . ID=gene-IY40_RS08125;Name=IY40_RS08125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS08125;old_locus_tag=IY40_08265 NZ_JPQY01000011.1 Protein Homology CDS 50712 51407 . - 0 ID=cds-WP_043138579.1;Parent=gene-IY40_RS08125;Dbxref=GenBank:WP_043138579.1;Name=WP_043138579.1;Ontology_term=GO:0006751,GO:0061928;gbkey=CDS;go_function=glutathione specific gamma-glutamylcyclotransferase activity|0061928||IEA;go_process=glutathione catabolic process|0006751||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006321352.1;locus_tag=IY40_RS08125;product=gamma-glutamylcyclotransferase;protein_id=WP_043138579.1;transl_table=11 NZ_JPQY01000011.1 RefSeq gene 51659 51886 . - . ID=gene-IY40_RS08130;Name=chaB;gbkey=Gene;gene=chaB;gene_biotype=protein_coding;locus_tag=IY40_RS08130;old_locus_tag=IY40_08270 NZ_JPQY01000011.1 Protein Homology CDS 51659 51886 . - 0 ID=cds-WP_025303227.1;Parent=gene-IY40_RS08130;Dbxref=GenBank:WP_025303227.1;Name=WP_025303227.1;gbkey=CDS;gene=chaB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013813446.1;locus_tag=IY40_RS08130;product=putative cation transport regulator ChaB;protein_id=WP_025303227.1;transl_table=11 NZ_JPQY01000011.1 RefSeq gene 52017 52835 . + . ID=gene-IY40_RS08135;Name=IY40_RS08135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS08135;old_locus_tag=IY40_08275 NZ_JPQY01000011.1 Protein Homology CDS 52017 52835 . + 0 ID=cds-WP_043138580.1;Parent=gene-IY40_RS08135;Dbxref=GenBank:WP_043138580.1;Name=WP_043138580.1;Ontology_term=GO:0071949;gbkey=CDS;go_function=FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016927334.1;locus_tag=IY40_RS08135;product=siderophore-interacting protein;protein_id=WP_043138580.1;transl_table=11 NZ_JPQY01000011.1 RefSeq gene 53130 54233 . + . ID=gene-IY40_RS08140;Name=chaA;gbkey=Gene;gene=chaA;gene_biotype=protein_coding;locus_tag=IY40_RS08140;old_locus_tag=IY40_08280 NZ_JPQY01000011.1 Protein Homology CDS 53130 54233 . + 0 ID=cds-WP_025303229.1;Parent=gene-IY40_RS08140;Dbxref=GenBank:WP_025303229.1;Name=WP_025303229.1;gbkey=CDS;gene=chaA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004706461.1;locus_tag=IY40_RS08140;product=sodium-potassium/proton antiporter ChaA;protein_id=WP_025303229.1;transl_table=11 NZ_JPQY01000011.1 RefSeq gene 54270 55172 . - . ID=gene-IY40_RS08145;Name=lpxO;gbkey=Gene;gene=lpxO;gene_biotype=protein_coding;locus_tag=IY40_RS08145;old_locus_tag=IY40_08285 NZ_JPQY01000011.1 Protein Homology CDS 54270 55172 . - 0 ID=cds-WP_025303230.1;Parent=gene-IY40_RS08145;Dbxref=GenBank:WP_025303230.1;Name=WP_025303230.1;Ontology_term=GO:0018193;gbkey=CDS;gene=lpxO;go_process=peptidyl-amino acid modification|0018193||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013649680.1;locus_tag=IY40_RS08145;product=lipid A hydroxylase LpxO;protein_id=WP_025303230.1;transl_table=11 NZ_JPQY01000011.1 RefSeq gene 55408 56196 . - . ID=gene-IY40_RS08150;Name=phoH;gbkey=Gene;gene=phoH;gene_biotype=protein_coding;locus_tag=IY40_RS08150;old_locus_tag=IY40_08290 NZ_JPQY01000011.1 Protein Homology CDS 55408 56196 . - 0 ID=cds-WP_015378226.1;Parent=gene-IY40_RS08150;Dbxref=GenBank:WP_015378226.1;Name=WP_015378226.1;gbkey=CDS;gene=phoH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001741490.1;locus_tag=IY40_RS08150;product=phosphate starvation-inducible protein PhoH;protein_id=WP_015378226.1;transl_table=11 NZ_JPQY01000011.1 RefSeq gene 56913 58211 . - . ID=gene-IY40_RS08155;Name=efeB;gbkey=Gene;gene=efeB;gene_biotype=protein_coding;locus_tag=IY40_RS08155;old_locus_tag=IY40_08295 NZ_JPQY01000011.1 Protein Homology CDS 56913 58211 . - 0 ID=cds-WP_043138581.1;Parent=gene-IY40_RS08155;Dbxref=GenBank:WP_043138581.1;Name=WP_043138581.1;Ontology_term=GO:0033212,GO:0004601,GO:0020037;gbkey=CDS;gene=efeB;go_function=peroxidase activity|0004601||IEA,heme binding|0020037||IEA;go_process=iron import into cell|0033212||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013813452.1;locus_tag=IY40_RS08155;product=iron uptake transporter deferrochelatase/peroxidase subunit;protein_id=WP_043138581.1;transl_table=11 NZ_JPQY01000011.1 RefSeq gene 58223 59359 . - . ID=gene-IY40_RS08160;Name=efeO;gbkey=Gene;gene=efeO;gene_biotype=protein_coding;locus_tag=IY40_RS08160;old_locus_tag=IY40_08300 NZ_JPQY01000011.1 Protein Homology CDS 58223 59359 . - 0 ID=cds-WP_043138585.1;Parent=gene-IY40_RS08160;Dbxref=GenBank:WP_043138585.1;Name=WP_043138585.1;Ontology_term=GO:0006826;gbkey=CDS;gene=efeO;go_process=iron ion transport|0006826||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211166.1;locus_tag=IY40_RS08160;product=iron uptake system protein EfeO;protein_id=WP_043138585.1;transl_table=11 NZ_JPQY01000011.1 RefSeq gene 59380 60225 . - . ID=gene-IY40_RS08165;Name=efeU;gbkey=Gene;gene=efeU;gene_biotype=protein_coding;locus_tag=IY40_RS08165;old_locus_tag=IY40_08305 NZ_JPQY01000011.1 Protein Homology CDS 59380 60225 . - 0 ID=cds-WP_043138589.1;Parent=gene-IY40_RS08165;Dbxref=GenBank:WP_043138589.1;Name=WP_043138589.1;Ontology_term=GO:0034755,GO:0005381,GO:0033573;gbkey=CDS;gene=efeU;go_component=high-affinity iron permease complex|0033573||IEA;go_function=iron ion transmembrane transporter activity|0005381||IEA;go_process=iron ion transmembrane transport|0034755||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004934730.1;locus_tag=IY40_RS08165;product=iron uptake transporter permease EfeU;protein_id=WP_043138589.1;transl_table=11 NZ_JPQY01000011.1 RefSeq gene 60471 61955 . - . ID=gene-IY40_RS08170;Name=putP;gbkey=Gene;gene=putP;gene_biotype=protein_coding;locus_tag=IY40_RS08170;old_locus_tag=IY40_08310 NZ_JPQY01000011.1 Protein Homology CDS 60471 61955 . - 0 ID=cds-WP_025303234.1;Parent=gene-IY40_RS08170;Dbxref=GenBank:WP_025303234.1;Name=WP_025303234.1;Ontology_term=GO:0006814,GO:0015824,GO:0055085,GO:0005298,GO:0031402,GO:0016020;gbkey=CDS;gene=putP;go_component=membrane|0016020||IEA;go_function=proline:sodium symporter activity|0005298||IEA,sodium ion binding|0031402||IEA;go_process=sodium ion transport|0006814||IEA,proline transport|0015824||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004392689.1;locus_tag=IY40_RS08170;product=sodium/proline symporter PutP;protein_id=WP_025303234.1;transl_table=11 NZ_JPQY01000011.1 RefSeq gene 62527 66498 . + . ID=gene-IY40_RS08175;Name=putA;gbkey=Gene;gene=putA;gene_biotype=protein_coding;locus_tag=IY40_RS08175;old_locus_tag=IY40_08315 NZ_JPQY01000011.1 Protein Homology CDS 62527 66498 . + 0 ID=cds-WP_025303235.1;Parent=gene-IY40_RS08175;Dbxref=GenBank:WP_025303235.1;Name=WP_025303235.1;Ontology_term=GO:0006355,GO:0055129,GO:0003700,GO:0003842,GO:0004657,GO:0016620;gbkey=CDS;gene=putA;go_function=DNA-binding transcription factor activity|0003700||IEA,L-glutamate gamma-semialdehyde dehydrogenase activity|0003842||IEA,proline dehydrogenase activity|0004657||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,L-proline biosynthetic process|0055129||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013813455.1;locus_tag=IY40_RS08175;product=trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase;protein_id=WP_025303235.1;transl_table=11 NZ_JPQY01000011.1 RefSeq pseudogene 66698 66793 . + . ID=gene-IY40_RS26650;Name=IY40_RS26650;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IY40_RS26650;partial=true;pseudo=true;start_range=.,66698 NZ_JPQY01000011.1 Protein Homology CDS 66698 66793 . + 0 ID=cds-IY40_RS26650;Parent=gene-IY40_RS26650;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004934737.1;locus_tag=IY40_RS26650;partial=true;product=type II toxin-antitoxin system HicB family antitoxin;pseudo=true;start_range=.,66698;transl_table=11 NZ_JPQY01000011.1 RefSeq gene 66823 67575 . - . ID=gene-IY40_RS08180;Name=tcyN;gbkey=Gene;gene=tcyN;gene_biotype=protein_coding;locus_tag=IY40_RS08180;old_locus_tag=IY40_08320 NZ_JPQY01000011.1 Protein Homology CDS 66823 67575 . - 0 ID=cds-WP_025303236.1;Parent=gene-IY40_RS08180;Dbxref=GenBank:WP_025303236.1;Name=WP_025303236.1;Ontology_term=GO:0003333,GO:0005524,GO:0015424;gbkey=CDS;gene=tcyN;go_function=ATP binding|0005524||IEA,ABC-type amino acid transporter activity|0015424||IEA;go_process=amino acid transmembrane transport|0003333||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006321380.1;locus_tag=IY40_RS08180;product=L-cystine ABC transporter ATP-binding protein TcyN;protein_id=WP_025303236.1;transl_table=11 NZ_JPQY01000011.1 RefSeq gene 67579 68241 . - . ID=gene-IY40_RS08185;Name=tcyL;gbkey=Gene;gene=tcyL;gene_biotype=protein_coding;locus_tag=IY40_RS08185;old_locus_tag=IY40_08325 NZ_JPQY01000011.1 Protein Homology CDS 67579 68241 . - 0 ID=cds-WP_025303237.1;Parent=gene-IY40_RS08185;Dbxref=GenBank:WP_025303237.1;Name=WP_025303237.1;gbkey=CDS;gene=tcyL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304211.1;locus_tag=IY40_RS08185;product=cystine ABC transporter permease;protein_id=WP_025303237.1;transl_table=11 NZ_JPQY01000011.1 RefSeq gene 68241 69041 . - . ID=gene-IY40_RS08190;Name=tcyJ;gbkey=Gene;gene=tcyJ;gene_biotype=protein_coding;locus_tag=IY40_RS08190;old_locus_tag=IY40_08330 NZ_JPQY01000011.1 Protein Homology CDS 68241 69041 . - 0 ID=cds-WP_025303238.1;Parent=gene-IY40_RS08190;Dbxref=GenBank:WP_025303238.1;Name=WP_025303238.1;Ontology_term=GO:0015276,GO:0016020;gbkey=CDS;gene=tcyJ;go_component=membrane|0016020||IEA;go_function=ligand-gated monoatomic ion channel activity|0015276||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211157.1;locus_tag=IY40_RS08190;product=cystine ABC transporter substrate-binding protein;protein_id=WP_025303238.1;transl_table=11 NZ_JPQY01000011.1 RefSeq gene 69157 70149 . - . ID=gene-IY40_RS08195;Name=IY40_RS08195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS08195;old_locus_tag=IY40_08335 NZ_JPQY01000011.1 Protein Homology CDS 69157 70149 . - 0 ID=cds-WP_025303239.1;Parent=gene-IY40_RS08195;Dbxref=GenBank:WP_025303239.1;Name=WP_025303239.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013649714.1;locus_tag=IY40_RS08195;product=D-cysteine desulfhydrase;protein_id=WP_025303239.1;transl_table=11 NZ_JPQY01000011.1 RefSeq gene 70274 70783 . - . ID=gene-IY40_RS08200;Name=fliZ;gbkey=Gene;gene=fliZ;gene_biotype=protein_coding;locus_tag=IY40_RS08200;old_locus_tag=IY40_08340 NZ_JPQY01000011.1 Protein Homology CDS 70274 70783 . - 0 ID=cds-WP_025303240.1;Parent=gene-IY40_RS08200;Dbxref=GenBank:WP_025303240.1;Name=WP_025303240.1;gbkey=CDS;gene=fliZ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211154.1;locus_tag=IY40_RS08200;product=flagella biosynthesis regulatory protein FliZ;protein_id=WP_025303240.1;transl_table=11 NZ_JPQY01000011.1 RefSeq gene 70839 71561 . - . ID=gene-IY40_RS08205;Name=IY40_RS08205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS08205;old_locus_tag=IY40_08345 NZ_JPQY01000011.1 Protein Homology CDS 70839 71561 . - 0 ID=cds-WP_004934752.1;Parent=gene-IY40_RS08205;Dbxref=GenBank:WP_004934752.1;Name=WP_004934752.1;Ontology_term=GO:0006352,GO:0006355,GO:0003677,GO:0003899,GO:0016987;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-directed RNA polymerase activity|0003899||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004392699.1;locus_tag=IY40_RS08205;product=RNA polymerase sigma factor FliA;protein_id=WP_004934752.1;transl_table=11 NZ_JPQY01000011.1 RefSeq gene 71744 73015 . - . ID=gene-IY40_RS08210;Name=IY40_RS08210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS08210;old_locus_tag=IY40_08350 NZ_JPQY01000011.1 Protein Homology CDS 71744 73015 . - 0 ID=cds-WP_043138593.1;Parent=gene-IY40_RS08210;Dbxref=GenBank:WP_043138593.1;Name=WP_043138593.1;Ontology_term=GO:0005198;gbkey=CDS;go_function=structural molecule activity|0005198||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013813464.1;locus_tag=IY40_RS08210;product=FliC/FljB family flagellin;protein_id=WP_043138593.1;transl_table=11 NZ_JPQY01000011.1 RefSeq gene 73297 74712 . + . ID=gene-IY40_RS08215;Name=fliD;gbkey=Gene;gene=fliD;gene_biotype=protein_coding;locus_tag=IY40_RS08215;old_locus_tag=IY40_08360 NZ_JPQY01000011.1 Protein Homology CDS 73297 74712 . + 0 ID=cds-WP_043138596.1;Parent=gene-IY40_RS08215;Dbxref=GenBank:WP_043138596.1;Name=WP_043138596.1;Ontology_term=GO:0007155,GO:0009288,GO:0009421;gbkey=CDS;gene=fliD;go_component=bacterial-type flagellum|0009288||IEA,bacterial-type flagellum filament cap|0009421||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004945953.1;locus_tag=IY40_RS08215;product=flagellar filament capping protein FliD;protein_id=WP_043138596.1;transl_table=11 NZ_JPQY01000011.1 RefSeq gene 74745 75155 . + . ID=gene-IY40_RS08220;Name=fliS;gbkey=Gene;gene=fliS;gene_biotype=protein_coding;locus_tag=IY40_RS08220;old_locus_tag=IY40_08365 NZ_JPQY01000011.1 Protein Homology CDS 74745 75155 . + 0 ID=cds-WP_043138600.1;Parent=gene-IY40_RS08220;Dbxref=GenBank:WP_043138600.1;Name=WP_043138600.1;Ontology_term=GO:0044780;gbkey=CDS;gene=fliS;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004961544.1;locus_tag=IY40_RS08220;product=flagellar export chaperone FliS;protein_id=WP_043138600.1;transl_table=11 NZ_JPQY01000011.1 RefSeq gene 75155 75523 . + . ID=gene-IY40_RS08225;Name=fliT;gbkey=Gene;gene=fliT;gene_biotype=protein_coding;locus_tag=IY40_RS08225;old_locus_tag=IY40_08370 NZ_JPQY01000011.1 Protein Homology CDS 75155 75523 . + 0 ID=cds-WP_004934765.1;Parent=gene-IY40_RS08225;Dbxref=GenBank:WP_004934765.1;Name=WP_004934765.1;Ontology_term=GO:0006605,GO:0044780,GO:1902209;gbkey=CDS;gene=fliT;go_process=protein targeting|0006605||IEA,bacterial-type flagellum assembly|0044780||IEA,negative regulation of bacterial-type flagellum assembly|1902209||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012145665.1;locus_tag=IY40_RS08225;product=flagella biosynthesis regulatory protein FliT;protein_id=WP_004934765.1;transl_table=11 NZ_JPQY01000011.1 RefSeq gene 75832 76692 . + . ID=gene-IY40_RS08230;Name=IY40_RS08230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS08230;old_locus_tag=IY40_08375 NZ_JPQY01000011.1 Protein Homology CDS 75832 76692 . + 0 ID=cds-WP_025303244.1;Parent=gene-IY40_RS08230;Dbxref=GenBank:WP_025303244.1;Name=WP_025303244.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015378238.1;locus_tag=IY40_RS08230;product=helix-turn-helix transcriptional regulator;protein_id=WP_025303244.1;transl_table=11 NZ_JPQY01000011.1 RefSeq gene 77172 78101 . - . ID=gene-IY40_RS08235;Name=IY40_RS08235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS08235;old_locus_tag=IY40_08380 NZ_JPQY01000011.1 Protein Homology CDS 77172 78101 . - 0 ID=cds-WP_025303245.1;Parent=gene-IY40_RS08235;Dbxref=GenBank:WP_025303245.1;Name=WP_025303245.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015671208.1;locus_tag=IY40_RS08235;product=LysR family transcriptional regulator;protein_id=WP_025303245.1;transl_table=11 NZ_JPQY01000011.1 RefSeq gene 78230 78829 . + . ID=gene-IY40_RS08240;Name=IY40_RS08240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS08240;old_locus_tag=IY40_08385 NZ_JPQY01000011.1 Protein Homology CDS 78230 78829 . + 0 ID=cds-WP_025303246.1;Parent=gene-IY40_RS08240;Dbxref=GenBank:WP_025303246.1;Name=WP_025303246.1;Ontology_term=GO:0008753,GO:0009055,GO:0010181,GO:0016491,GO:0050136,GO:0050446;gbkey=CDS;go_function=NADPH dehydrogenase (quinone) activity|0008753||IEA,electron transfer activity|0009055||IEA,FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA,NADH dehydrogenase (quinone) (non-electrogenic) activity|0050136||IEA,azobenzene reductase (NADP+) activity|0050446||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015378241.1;locus_tag=IY40_RS08240;product=FMN-dependent NADH-azoreductase;protein_id=WP_025303246.1;transl_table=11 NZ_JPQY01000011.1 RefSeq gene 79003 79206 . - . ID=gene-IY40_RS08245;Name=IY40_RS08245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS08245;old_locus_tag=IY40_08390 NZ_JPQY01000011.1 GeneMarkS-2+ CDS 79003 79206 . - 0 ID=cds-WP_141998313.1;Parent=gene-IY40_RS08245;Dbxref=GenBank:WP_141998313.1;Name=WP_141998313.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IY40_RS08245;product=hypothetical protein;protein_id=WP_141998313.1;transl_table=11 NZ_JPQY01000011.1 RefSeq gene 79284 79598 . - . ID=gene-IY40_RS08250;Name=fliE;gbkey=Gene;gene=fliE;gene_biotype=protein_coding;locus_tag=IY40_RS08250;old_locus_tag=IY40_08395 NZ_JPQY01000011.1 Protein Homology CDS 79284 79598 . - 0 ID=cds-WP_025159836.1;Parent=gene-IY40_RS08250;Dbxref=GenBank:WP_025159836.1;Name=WP_025159836.1;Ontology_term=GO:0071973,GO:0003774,GO:0009431;gbkey=CDS;gene=fliE;go_component=bacterial-type flagellum basal body%2C MS ring|0009431||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005160376.1;locus_tag=IY40_RS08250;product=flagellar hook-basal body complex protein FliE;protein_id=WP_025159836.1;transl_table=11 NZ_JPQY01000011.1 RefSeq gene 79914 81614 . + . ID=gene-IY40_RS08255;Name=fliF;gbkey=Gene;gene=fliF;gene_biotype=protein_coding;locus_tag=IY40_RS08255;old_locus_tag=IY40_08400 NZ_JPQY01000011.1 Protein Homology CDS 79914 81614 . + 0 ID=cds-WP_043138608.1;Parent=gene-IY40_RS08255;Dbxref=GenBank:WP_043138608.1;Name=WP_043138608.1;Ontology_term=GO:0001539,GO:0005198,GO:0009431;gbkey=CDS;gene=fliF;go_component=bacterial-type flagellum basal body%2C MS ring|0009431||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020079199.1;locus_tag=IY40_RS08255;product=flagellar basal-body MS-ring/collar protein FliF;protein_id=WP_043138608.1;transl_table=11 NZ_JPQY01000011.1 RefSeq gene 81611 82603 . + . ID=gene-IY40_RS08260;Name=fliG;gbkey=Gene;gene=fliG;gene_biotype=protein_coding;locus_tag=IY40_RS08260;old_locus_tag=IY40_08405 NZ_JPQY01000011.1 Protein Homology CDS 81611 82603 . + 0 ID=cds-WP_025303249.1;Parent=gene-IY40_RS08260;Dbxref=GenBank:WP_025303249.1;Name=WP_025303249.1;Ontology_term=GO:0006935,GO:0071973,GO:0003774,GO:0009288;gbkey=CDS;gene=fliG;go_component=bacterial-type flagellum|0009288||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=chemotaxis|0006935||IEA,bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211142.1;locus_tag=IY40_RS08260;product=flagellar motor switch protein FliG;protein_id=WP_025303249.1;transl_table=11 NZ_JPQY01000011.1 RefSeq gene 82596 83300 . + . ID=gene-IY40_RS08265;Name=fliH;gbkey=Gene;gene=fliH;gene_biotype=protein_coding;locus_tag=IY40_RS08265;old_locus_tag=IY40_08410 NZ_JPQY01000011.1 Protein Homology CDS 82596 83300 . + 0 ID=cds-WP_025303250.1;Parent=gene-IY40_RS08265;Dbxref=GenBank:WP_025303250.1;Name=WP_025303250.1;Ontology_term=GO:0071973,GO:0003774,GO:0009288;gbkey=CDS;gene=fliH;go_component=bacterial-type flagellum|0009288||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004934780.1;locus_tag=IY40_RS08265;product=flagellar assembly protein FliH;protein_id=WP_025303250.1;transl_table=11 NZ_JPQY01000011.1 RefSeq gene 83300 84661 . + . ID=gene-IY40_RS08270;Name=fliI;gbkey=Gene;gene=fliI;gene_biotype=protein_coding;locus_tag=IY40_RS08270;old_locus_tag=IY40_08415 NZ_JPQY01000011.1 Protein Homology CDS 83300 84661 . + 0 ID=cds-WP_004934781.1;Parent=gene-IY40_RS08270;Dbxref=GenBank:WP_004934781.1;Name=WP_004934781.1;Ontology_term=GO:0044780,GO:0071973,GO:0016887;gbkey=CDS;gene=fliI;go_function=ATP hydrolysis activity|0016887||IEA;go_process=bacterial-type flagellum assembly|0044780||IEA,bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020079202.1;locus_tag=IY40_RS08270;product=flagellar protein export ATPase FliI;protein_id=WP_004934781.1;transl_table=11 NZ_JPQY01000011.1 RefSeq gene 84683 85129 . + . ID=gene-IY40_RS08275;Name=fliJ;gbkey=Gene;gene=fliJ;gene_biotype=protein_coding;locus_tag=IY40_RS08275;old_locus_tag=IY40_08420 NZ_JPQY01000011.1 Protein Homology CDS 84683 85129 . + 0 ID=cds-WP_043138615.1;Parent=gene-IY40_RS08275;Dbxref=GenBank:WP_043138615.1;Name=WP_043138615.1;Ontology_term=GO:0071973,GO:0003774,GO:0009288;gbkey=CDS;gene=fliJ;go_component=bacterial-type flagellum|0009288||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006326110.1;locus_tag=IY40_RS08275;product=flagellar export protein FliJ;protein_id=WP_043138615.1;transl_table=11 NZ_JPQY01000011.1 RefSeq gene 85126 86355 . + . ID=gene-IY40_RS08280;Name=IY40_RS08280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS08280;old_locus_tag=IY40_08425 NZ_JPQY01000011.1 Protein Homology CDS 85126 86355 . + 0 ID=cds-WP_043138619.1;Parent=gene-IY40_RS08280;Dbxref=GenBank:WP_043138619.1;Name=WP_043138619.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015378244.1;locus_tag=IY40_RS08280;product=flagellar hook-length control protein FliK;protein_id=WP_043138619.1;transl_table=11 NZ_JPQY01000011.1 RefSeq gene 86521 87006 . + . ID=gene-IY40_RS08285;Name=fliL;gbkey=Gene;gene=fliL;gene_biotype=protein_coding;locus_tag=IY40_RS08285;old_locus_tag=IY40_08430 NZ_JPQY01000011.1 Protein Homology CDS 86521 87006 . + 0 ID=cds-WP_043138622.1;Parent=gene-IY40_RS08285;Dbxref=GenBank:WP_043138622.1;Name=WP_043138622.1;Ontology_term=GO:0006935,GO:0071973,GO:0009425;gbkey=CDS;gene=fliL;go_component=bacterial-type flagellum basal body|0009425||IEA;go_process=chemotaxis|0006935||IEA,bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008105400.1;locus_tag=IY40_RS08285;product=flagellar basal body-associated protein FliL;protein_id=WP_043138622.1;transl_table=11 NZ_JPQY01000011.1 RefSeq gene 87012 88016 . + . ID=gene-IY40_RS08290;Name=fliM;gbkey=Gene;gene=fliM;gene_biotype=protein_coding;locus_tag=IY40_RS08290;old_locus_tag=IY40_08435 NZ_JPQY01000011.1 Protein Homology CDS 87012 88016 . + 0 ID=cds-WP_025303254.1;Parent=gene-IY40_RS08290;Dbxref=GenBank:WP_025303254.1;Name=WP_025303254.1;Ontology_term=GO:0001539,GO:0009288;gbkey=CDS;gene=fliM;go_component=bacterial-type flagellum|0009288||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004700939.1;locus_tag=IY40_RS08290;product=flagellar motor switch protein FliM;protein_id=WP_025303254.1;transl_table=11 NZ_JPQY01000011.1 RefSeq gene 88009 88425 . + . ID=gene-IY40_RS08295;Name=fliN;gbkey=Gene;gene=fliN;gene_biotype=protein_coding;locus_tag=IY40_RS08295;old_locus_tag=IY40_08440 NZ_JPQY01000011.1 Protein Homology CDS 88009 88425 . + 0 ID=cds-WP_004934799.1;Parent=gene-IY40_RS08295;Dbxref=GenBank:WP_004934799.1;Name=WP_004934799.1;Ontology_term=GO:0001539,GO:0003774,GO:0009288,GO:0016020;gbkey=CDS;gene=fliN;go_component=bacterial-type flagellum|0009288||IEA,membrane|0016020||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004961501.1;locus_tag=IY40_RS08295;product=flagellar motor switch protein FliN;protein_id=WP_004934799.1;transl_table=11 NZ_JPQY01000011.1 RefSeq gene 88425 88829 . + . ID=gene-IY40_RS08300;Name=fliO;gbkey=Gene;gene=fliO;gene_biotype=protein_coding;locus_tag=IY40_RS08300;old_locus_tag=IY40_08445 NZ_JPQY01000011.1 Protein Homology CDS 88425 88829 . + 0 ID=cds-WP_025303256.1;Parent=gene-IY40_RS08300;Dbxref=GenBank:WP_025303256.1;Name=WP_025303256.1;Ontology_term=GO:0044781,GO:0016020;gbkey=CDS;gene=fliO;go_component=membrane|0016020||IEA;go_process=bacterial-type flagellum organization|0044781||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016927306.1;locus_tag=IY40_RS08300;product=flagellar biosynthetic protein FliO;protein_id=WP_025303256.1;transl_table=11 NZ_JPQY01000011.1 RefSeq gene 88826 89587 . + . ID=gene-IY40_RS08305;Name=fliP;gbkey=Gene;gene=fliP;gene_biotype=protein_coding;locus_tag=IY40_RS08305;old_locus_tag=IY40_08450 NZ_JPQY01000011.1 Protein Homology CDS 88826 89587 . + 0 ID=cds-WP_025303257.1;Parent=gene-IY40_RS08305;Dbxref=GenBank:WP_025303257.1;Name=WP_025303257.1;Note=The bacterial flagellar biogenesis protein FliP forms a type III secretion system (T3SS)-type pore required for flagellar assembly.;Ontology_term=GO:0009306,GO:0016020;gbkey=CDS;gene=fliP;go_component=membrane|0016020||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004934802.1;locus_tag=IY40_RS08305;product=flagellar type III secretion system pore protein FliP;protein_id=WP_025303257.1;transl_table=11 NZ_JPQY01000011.1 RefSeq gene 89609 89878 . + . ID=gene-IY40_RS08310;Name=fliQ;gbkey=Gene;gene=fliQ;gene_biotype=protein_coding;locus_tag=IY40_RS08310;old_locus_tag=IY40_08455 NZ_JPQY01000011.1 Protein Homology CDS 89609 89878 . + 0 ID=cds-WP_004934803.1;Parent=gene-IY40_RS08310;Dbxref=GenBank:WP_004934803.1;Name=WP_004934803.1;Ontology_term=GO:0044780,GO:0016020;gbkey=CDS;gene=fliQ;go_component=membrane|0016020||IEA;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013365797.1;locus_tag=IY40_RS08310;product=flagellar biosynthesis protein FliQ;protein_id=WP_004934803.1;transl_table=11 NZ_JPQY01000011.1 RefSeq gene 89881 90663 . + . ID=gene-IY40_RS08315;Name=fliR;gbkey=Gene;gene=fliR;gene_biotype=protein_coding;locus_tag=IY40_RS08315;old_locus_tag=IY40_08460 NZ_JPQY01000011.1 Protein Homology CDS 89881 90663 . + 0 ID=cds-WP_043138626.1;Parent=gene-IY40_RS08315;Dbxref=GenBank:WP_043138626.1;Name=WP_043138626.1;Ontology_term=GO:0006605,GO:0044780,GO:0016020;gbkey=CDS;gene=fliR;go_component=membrane|0016020||IEA;go_process=protein targeting|0006605||IEA,bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004934804.1;locus_tag=IY40_RS08315;product=flagellar biosynthetic protein FliR;protein_id=WP_043138626.1;transl_table=11 NZ_JPQY01000011.1 RefSeq gene 91020 91154 . + . ID=gene-IY40_RS26360;Name=sra;gbkey=Gene;gene=sra;gene_biotype=protein_coding;locus_tag=IY40_RS26360 NZ_JPQY01000011.1 Protein Homology CDS 91020 91154 . + 0 ID=cds-WP_087763075.1;Parent=gene-IY40_RS26360;Dbxref=GenBank:WP_087763075.1;Name=WP_087763075.1;gbkey=CDS;gene=sra;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013813483.1;locus_tag=IY40_RS26360;product=stationary-phase-induced ribosome-associated protein;protein_id=WP_087763075.1;transl_table=11 NZ_JPQY01000011.1 RefSeq gene 91427 92386 . - . ID=gene-IY40_RS08320;Name=flgL;gbkey=Gene;gene=flgL;gene_biotype=protein_coding;locus_tag=IY40_RS08320;old_locus_tag=IY40_08470 NZ_JPQY01000011.1 Protein Homology CDS 91427 92386 . - 0 ID=cds-WP_016927302.1;Parent=gene-IY40_RS08320;Dbxref=GenBank:WP_016927302.1;Name=WP_016927302.1;Ontology_term=GO:0001539,GO:0005198,GO:0009424;gbkey=CDS;gene=flgL;go_component=bacterial-type flagellum hook|0009424||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001223036.1;locus_tag=IY40_RS08320;product=flagellar hook-associated protein FlgL;protein_id=WP_016927302.1;transl_table=11 NZ_JPQY01000011.1 RefSeq gene 92446 94095 . - . ID=gene-IY40_RS08325;Name=flgK;gbkey=Gene;gene=flgK;gene_biotype=protein_coding;locus_tag=IY40_RS08325;old_locus_tag=IY40_08475 NZ_JPQY01000011.1 Protein Homology CDS 92446 94095 . - 0 ID=cds-WP_033643519.1;Parent=gene-IY40_RS08325;Dbxref=GenBank:WP_033643519.1;Name=WP_033643519.1;Ontology_term=GO:0044780,GO:0005198,GO:0009424;gbkey=CDS;gene=flgK;go_component=bacterial-type flagellum hook|0009424||IEA;go_function=structural molecule activity|0005198||IEA;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004934814.1;locus_tag=IY40_RS08325;product=flagellar hook-associated protein FlgK;protein_id=WP_033643519.1;transl_table=11 NZ_JPQY01000011.1 RefSeq gene 94381 95325 . - . ID=gene-IY40_RS08335;Name=flgJ;gbkey=Gene;gene=flgJ;gene_biotype=protein_coding;locus_tag=IY40_RS08335;old_locus_tag=IY40_08485 NZ_JPQY01000011.1 Protein Homology CDS 94381 95325 . - 0 ID=cds-WP_004934815.1;Parent=gene-IY40_RS08335;Dbxref=GenBank:WP_004934815.1;Name=WP_004934815.1;Ontology_term=GO:0044780,GO:0016798;gbkey=CDS;gene=flgJ;go_function=hydrolase activity%2C acting on glycosyl bonds|0016798||IEA;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013813488.1;locus_tag=IY40_RS08335;product=flagellar assembly peptidoglycan hydrolase FlgJ;protein_id=WP_004934815.1;transl_table=11 NZ_JPQY01000011.1 RefSeq gene 95325 96425 . - . ID=gene-IY40_RS08340;Name=IY40_RS08340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS08340;old_locus_tag=IY40_08490 NZ_JPQY01000011.1 Protein Homology CDS 95325 96425 . - 0 ID=cds-WP_004934816.1;Parent=gene-IY40_RS08340;Dbxref=GenBank:WP_004934816.1;Name=WP_004934816.1;Ontology_term=GO:0071973,GO:0005198,GO:0009428,GO:0030288;gbkey=CDS;go_component=bacterial-type flagellum basal body%2C distal rod%2C P ring|0009428||IEA,outer membrane-bounded periplasmic space|0030288||IEA;go_function=structural molecule activity|0005198||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004934816.1;locus_tag=IY40_RS08340;product=flagellar basal body P-ring protein FlgI;protein_id=WP_004934816.1;transl_table=11 NZ_JPQY01000011.1 RefSeq gene 96436 97137 . - . ID=gene-IY40_RS08345;Name=flgH;gbkey=Gene;gene=flgH;gene_biotype=protein_coding;locus_tag=IY40_RS08345;old_locus_tag=IY40_08495 NZ_JPQY01000011.1 Protein Homology CDS 96436 97137 . - 0 ID=cds-WP_004934817.1;Parent=gene-IY40_RS08345;Dbxref=GenBank:WP_004934817.1;Name=WP_004934817.1;Ontology_term=GO:0071973,GO:0003774,GO:0009427;gbkey=CDS;gene=flgH;go_component=bacterial-type flagellum basal body%2C distal rod%2C L ring|0009427||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004946079.1;locus_tag=IY40_RS08345;product=flagellar basal body L-ring protein FlgH;protein_id=WP_004934817.1;transl_table=11 NZ_JPQY01000011.1 RefSeq gene 97221 98003 . - . ID=gene-IY40_RS08350;Name=flgG;gbkey=Gene;gene=flgG;gene_biotype=protein_coding;locus_tag=IY40_RS08350;old_locus_tag=IY40_08500 NZ_JPQY01000011.1 Protein Homology CDS 97221 98003 . - 0 ID=cds-WP_043138630.1;Parent=gene-IY40_RS08350;Dbxref=GenBank:WP_043138630.1;Name=WP_043138630.1;Ontology_term=GO:0071973,GO:0009426;gbkey=CDS;gene=flgG;go_component=bacterial-type flagellum basal body%2C distal rod|0009426||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006819466.1;locus_tag=IY40_RS08350;product=flagellar basal-body rod protein FlgG;protein_id=WP_043138630.1;transl_table=11 NZ_JPQY01000011.1 RefSeq gene 98022 98777 . - . ID=gene-IY40_RS08355;Name=IY40_RS08355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS08355;old_locus_tag=IY40_08505 NZ_JPQY01000011.1 Protein Homology CDS 98022 98777 . - 0 ID=cds-WP_043138634.1;Parent=gene-IY40_RS08355;Dbxref=GenBank:WP_043138634.1;Name=WP_043138634.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460149.1;locus_tag=IY40_RS08355;product=flagellar basal body rod protein FlgF;protein_id=WP_043138634.1;transl_table=11 NZ_JPQY01000011.1 RefSeq gene 98790 100013 . - . ID=gene-IY40_RS08360;Name=flgE;gbkey=Gene;gene=flgE;gene_biotype=protein_coding;locus_tag=IY40_RS08360;old_locus_tag=IY40_08510 NZ_JPQY01000011.1 Protein Homology CDS 98790 100013 . - 0 ID=cds-WP_025303262.1;Parent=gene-IY40_RS08360;Dbxref=GenBank:WP_025303262.1;Name=WP_025303262.1;gbkey=CDS;gene=flgE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211113.1;locus_tag=IY40_RS08360;product=flagellar hook protein FlgE;protein_id=WP_025303262.1;transl_table=11 NZ_JPQY01000011.1 RefSeq gene 100068 100745 . - . ID=gene-IY40_RS08365;Name=flgD;gbkey=Gene;gene=flgD;gene_biotype=protein_coding;locus_tag=IY40_RS08365;old_locus_tag=IY40_08515 NZ_JPQY01000011.1 Protein Homology CDS 100068 100745 . - 0 ID=cds-WP_016927297.1;Parent=gene-IY40_RS08365;Dbxref=GenBank:WP_016927297.1;Name=WP_016927297.1;gbkey=CDS;gene=flgD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006321445.1;locus_tag=IY40_RS08365;product=flagellar hook assembly protein FlgD;protein_id=WP_016927297.1;transl_table=11 NZ_JPQY01000011.1 RefSeq gene 100758 101162 . - . ID=gene-IY40_RS08370;Name=flgC;gbkey=Gene;gene=flgC;gene_biotype=protein_coding;locus_tag=IY40_RS08370;old_locus_tag=IY40_08520 NZ_JPQY01000011.1 Protein Homology CDS 100758 101162 . - 0 ID=cds-WP_004934826.1;Parent=gene-IY40_RS08370;Dbxref=GenBank:WP_004934826.1;Name=WP_004934826.1;Ontology_term=GO:0071973,GO:0030694;gbkey=CDS;gene=flgC;go_component=bacterial-type flagellum basal body%2C rod|0030694||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001740734.1;locus_tag=IY40_RS08370;product=flagellar basal body rod protein FlgC;protein_id=WP_004934826.1;transl_table=11 NZ_JPQY01000011.1 RefSeq gene 101168 101581 . - . ID=gene-IY40_RS08375;Name=flgB;gbkey=Gene;gene=flgB;gene_biotype=protein_coding;locus_tag=IY40_RS08375;old_locus_tag=IY40_08525 NZ_JPQY01000011.1 Protein Homology CDS 101168 101581 . - 0 ID=cds-WP_025303263.1;Parent=gene-IY40_RS08375;Dbxref=GenBank:WP_025303263.1;Name=WP_025303263.1;Ontology_term=GO:0071973,GO:0030694;gbkey=CDS;gene=flgB;go_component=bacterial-type flagellum basal body%2C rod|0030694||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004392144.1;locus_tag=IY40_RS08375;product=flagellar basal body rod protein FlgB;protein_id=WP_025303263.1;transl_table=11 NZ_JPQY01000011.1 RefSeq gene 101742 102395 . + . ID=gene-IY40_RS08380;Name=flgA;gbkey=Gene;gene=flgA;gene_biotype=protein_coding;locus_tag=IY40_RS08380;old_locus_tag=IY40_08530 NZ_JPQY01000011.1 Protein Homology CDS 101742 102395 . + 0 ID=cds-WP_043138759.1;Parent=gene-IY40_RS08380;Dbxref=GenBank:WP_043138759.1;Name=WP_043138759.1;Ontology_term=GO:0001539,GO:0005198,GO:0009428;gbkey=CDS;gene=flgA;go_component=bacterial-type flagellum basal body%2C distal rod%2C P ring|0009428||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019452956.1;locus_tag=IY40_RS08380;product=flagellar basal body P-ring formation chaperone FlgA;protein_id=WP_043138759.1;transl_table=11 NZ_JPQY01000011.1 RefSeq gene 102525 102836 . + . ID=gene-IY40_RS08385;Name=flgM;gbkey=Gene;gene=flgM;gene_biotype=protein_coding;locus_tag=IY40_RS08385;old_locus_tag=IY40_08535 NZ_JPQY01000011.1 Protein Homology CDS 102525 102836 . + 0 ID=cds-WP_004934832.1;Parent=gene-IY40_RS08385;Dbxref=GenBank:WP_004934832.1;Name=WP_004934832.1;Ontology_term=GO:0045892;gbkey=CDS;gene=flgM;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019452957.1;locus_tag=IY40_RS08385;product=flagellar biosynthesis anti-sigma factor FlgM;protein_id=WP_004934832.1;transl_table=11 NZ_JPQY01000011.1 RefSeq gene 102877 103311 . + . ID=gene-IY40_RS08390;Name=IY40_RS08390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS08390;old_locus_tag=IY40_08540 NZ_JPQY01000011.1 Protein Homology CDS 102877 103311 . + 0 ID=cds-WP_025303265.1;Parent=gene-IY40_RS08390;Dbxref=GenBank:WP_025303265.1;Name=WP_025303265.1;Ontology_term=GO:0044780;gbkey=CDS;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006321463.1;locus_tag=IY40_RS08390;product=flagella synthesis protein FlgN;protein_id=WP_025303265.1;transl_table=11 NZ_JPQY01000011.1 RefSeq gene 103542 103916 . + . ID=gene-IY40_RS08395;Name=IY40_RS08395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS08395;old_locus_tag=IY40_08545 NZ_JPQY01000011.1 Protein Homology CDS 103542 103916 . + 0 ID=cds-WP_025303266.1;Parent=gene-IY40_RS08395;Dbxref=GenBank:WP_025303266.1;Name=WP_025303266.1;Ontology_term=GO:0004519,GO:0090729,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=endonuclease activity|0004519||IEA,toxin activity|0090729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004934837.1;locus_tag=IY40_RS08395;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_025303266.1;transl_table=11 NZ_JPQY01000011.1 RefSeq gene 103909 104211 . + . ID=gene-IY40_RS08400;Name=IY40_RS08400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS08400;old_locus_tag=IY40_08550 NZ_JPQY01000011.1 Protein Homology CDS 103909 104211 . + 0 ID=cds-WP_015378258.1;Parent=gene-IY40_RS08400;Dbxref=GenBank:WP_015378258.1;Name=WP_015378258.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013813500.1;locus_tag=IY40_RS08400;product=helix-turn-helix domain-containing protein;protein_id=WP_015378258.1;transl_table=11 NZ_JPQY01000011.1 RefSeq gene 104214 104618 . - . ID=gene-IY40_RS08405;Name=IY40_RS08405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS08405;old_locus_tag=IY40_08555 NZ_JPQY01000011.1 Protein Homology CDS 104214 104618 . - 0 ID=cds-WP_038629510.1;Parent=gene-IY40_RS08405;Dbxref=GenBank:WP_038629510.1;Name=WP_038629510.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019452960.1;locus_tag=IY40_RS08405;product=flagellar protein FlhE;protein_id=WP_038629510.1;transl_table=11 NZ_JPQY01000011.1 RefSeq gene 104618 106696 . - . ID=gene-IY40_RS08410;Name=flhA;gbkey=Gene;gene=flhA;gene_biotype=protein_coding;locus_tag=IY40_RS08410;old_locus_tag=IY40_08560 NZ_JPQY01000011.1 Protein Homology CDS 104618 106696 . - 0 ID=cds-WP_025303268.1;Parent=gene-IY40_RS08410;Dbxref=GenBank:WP_025303268.1;Name=WP_025303268.1;Ontology_term=GO:0044780,GO:0016020;gbkey=CDS;gene=flhA;go_component=membrane|0016020||IEA;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012413652.1;locus_tag=IY40_RS08410;product=flagellar biosynthesis protein FlhA;protein_id=WP_025303268.1;transl_table=11 NZ_JPQY01000011.1 RefSeq gene 106689 107840 . - . ID=gene-IY40_RS08415;Name=flhB;gbkey=Gene;gene=flhB;gene_biotype=protein_coding;locus_tag=IY40_RS08415;old_locus_tag=IY40_08565 NZ_JPQY01000011.1 Protein Homology CDS 106689 107840 . - 0 ID=cds-WP_043138644.1;Parent=gene-IY40_RS08415;Dbxref=GenBank:WP_043138644.1;Name=WP_043138644.1;Ontology_term=GO:0015031,GO:0044780,GO:0016020;gbkey=CDS;gene=flhB;go_component=membrane|0016020||IEA;go_process=protein transport|0015031||IEA,bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004934847.1;locus_tag=IY40_RS08415;product=flagellar biosynthesis protein FlhB;protein_id=WP_043138644.1;transl_table=11 NZ_JPQY01000011.1 RefSeq gene 108006 108650 . - . ID=gene-IY40_RS08420;Name=cheZ;gbkey=Gene;gene=cheZ;gene_biotype=protein_coding;locus_tag=IY40_RS08420;old_locus_tag=IY40_08570 NZ_JPQY01000011.1 Protein Homology CDS 108006 108650 . - 0 ID=cds-WP_004934858.1;Parent=gene-IY40_RS08420;Dbxref=GenBank:WP_004934858.1;Name=WP_004934858.1;Ontology_term=GO:0050920,GO:0003824;gbkey=CDS;gene=cheZ;go_function=catalytic activity|0003824||IEA;go_process=regulation of chemotaxis|0050920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210872.1;locus_tag=IY40_RS08420;product=protein phosphatase CheZ;protein_id=WP_004934858.1;transl_table=11 NZ_JPQY01000011.1 RefSeq gene 108661 109050 . - . ID=gene-IY40_RS08425;Name=cheY;gbkey=Gene;gene=cheY;gene_biotype=protein_coding;locus_tag=IY40_RS08425;old_locus_tag=IY40_08575 NZ_JPQY01000011.1 Protein Homology CDS 108661 109050 . - 0 ID=cds-WP_004934862.1;Parent=gene-IY40_RS08425;Dbxref=GenBank:WP_004934862.1;Name=WP_004934862.1;Ontology_term=GO:0000160;gbkey=CDS;gene=cheY;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210873.1;locus_tag=IY40_RS08425;product=chemotaxis response regulator CheY;protein_id=WP_004934862.1;transl_table=11 NZ_JPQY01000011.1 RefSeq gene 109153 110202 . - . ID=gene-IY40_RS08430;Name=IY40_RS08430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS08430;old_locus_tag=IY40_08580 NZ_JPQY01000011.1 Protein Homology CDS 109153 110202 . - 0 ID=cds-WP_025303269.1;Parent=gene-IY40_RS08430;Dbxref=GenBank:WP_025303269.1;Name=WP_025303269.1;Ontology_term=GO:0006482,GO:0006935,GO:0018277,GO:0000156,GO:0008984,GO:0050568,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=phosphorelay response regulator activity|0000156||IEA,protein-glutamate methylesterase activity|0008984||IEA,protein-glutamine glutaminase activity|0050568||IEA;go_process=protein demethylation|0006482||IEA,chemotaxis|0006935||IEA,protein deamination|0018277||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000036372.1;locus_tag=IY40_RS08430;product=protein-glutamate methylesterase/protein-glutamine glutaminase;protein_id=WP_025303269.1;transl_table=11 NZ_JPQY01000011.1 RefSeq gene 110202 111074 . - . ID=gene-IY40_RS08435;Name=cheR;gbkey=Gene;gene=cheR;gene_biotype=protein_coding;locus_tag=IY40_RS08435;old_locus_tag=IY40_08585 NZ_JPQY01000011.1 Protein Homology CDS 110202 111074 . - 0 ID=cds-WP_025159837.1;Parent=gene-IY40_RS08435;Dbxref=GenBank:WP_025159837.1;Name=WP_025159837.1;Ontology_term=GO:0008757;gbkey=CDS;gene=cheR;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015367340.1;locus_tag=IY40_RS08435;product=protein-glutamate O-methyltransferase CheR;protein_id=WP_025159837.1;transl_table=11 NZ_JPQY01000011.1 RefSeq gene 111112 112728 . - . ID=gene-IY40_RS08440;Name=IY40_RS08440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS08440;old_locus_tag=IY40_08590 NZ_JPQY01000011.1 Protein Homology CDS 111112 112728 . - 0 ID=cds-WP_038629515.1;Parent=gene-IY40_RS08440;Dbxref=GenBank:WP_038629515.1;Name=WP_038629515.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016927287.1;locus_tag=IY40_RS08440;product=methyl-accepting chemotaxis protein;protein_id=WP_038629515.1;transl_table=11 NZ_JPQY01000011.1 RefSeq gene 112805 114475 . - . ID=gene-IY40_RS08445;Name=tsr;gbkey=Gene;gene=tsr;gene_biotype=protein_coding;locus_tag=IY40_RS08445;old_locus_tag=IY40_08595 NZ_JPQY01000011.1 Protein Homology CDS 112805 114475 . - 0 ID=cds-WP_043138649.1;Parent=gene-IY40_RS08445;Dbxref=GenBank:WP_043138649.1;Name=WP_043138649.1;Ontology_term=GO:0006935,GO:0007165,GO:0004888,GO:0016020;gbkey=CDS;gene=tsr;go_component=membrane|0016020||IEA;go_function=transmembrane signaling receptor activity|0004888||IEA;go_process=chemotaxis|0006935||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015367342.1;locus_tag=IY40_RS08445;product=methyl-accepting chemotaxis protein;protein_id=WP_043138649.1;transl_table=11 NZ_JPQY01000011.1 RefSeq gene 114672 115172 . - . ID=gene-IY40_RS08450;Name=cheW;gbkey=Gene;gene=cheW;gene_biotype=protein_coding;locus_tag=IY40_RS08450;old_locus_tag=IY40_08600 NZ_JPQY01000011.1 Protein Homology CDS 114672 115172 . - 0 ID=cds-WP_025303271.1;Parent=gene-IY40_RS08450;Dbxref=GenBank:WP_025303271.1;Name=WP_025303271.1;gbkey=CDS;gene=cheW;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004934876.1;locus_tag=IY40_RS08450;product=chemotaxis protein CheW;protein_id=WP_025303271.1;transl_table=11 NZ_JPQY01000011.1 RefSeq gene 115205 117226 . - . ID=gene-IY40_RS08455;Name=cheA;gbkey=Gene;gene=cheA;gene_biotype=protein_coding;locus_tag=IY40_RS08455;old_locus_tag=IY40_08605 NZ_JPQY01000011.1 Protein Homology CDS 115205 117226 . - 0 ID=cds-WP_043138653.1;Parent=gene-IY40_RS08455;Dbxref=GenBank:WP_043138653.1;Name=WP_043138653.1;Ontology_term=GO:0000160,GO:0006935,GO:0016310,GO:0000155;gbkey=CDS;gene=cheA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,chemotaxis|0006935||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004934879.1;locus_tag=IY40_RS08455;product=chemotaxis protein CheA;protein_id=WP_043138653.1;transl_table=11 NZ_JPQY01000011.1 RefSeq gene 117223 118299 . - . ID=gene-IY40_RS08460;Name=motB;gbkey=Gene;gene=motB;gene_biotype=protein_coding;locus_tag=IY40_RS08460;old_locus_tag=IY40_08610 NZ_JPQY01000011.1 Protein Homology CDS 117223 118299 . - 0 ID=cds-WP_043138656.1;Parent=gene-IY40_RS08460;Dbxref=GenBank:WP_043138656.1;Name=WP_043138656.1;gbkey=CDS;gene=motB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016927283.1;locus_tag=IY40_RS08460;product=flagellar motor protein MotB;protein_id=WP_043138656.1;transl_table=11 NZ_JPQY01000011.1 RefSeq gene 118296 119186 . - . ID=gene-IY40_RS08465;Name=motA;gbkey=Gene;gene=motA;gene_biotype=protein_coding;locus_tag=IY40_RS08465;old_locus_tag=IY40_08615 NZ_JPQY01000011.1 Protein Homology CDS 118296 119186 . - 0 ID=cds-WP_015378266.1;Parent=gene-IY40_RS08465;Dbxref=GenBank:WP_015378266.1;Name=WP_015378266.1;gbkey=CDS;gene=motA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006326150.1;locus_tag=IY40_RS08465;product=flagellar motor stator protein MotA;protein_id=WP_015378266.1;transl_table=11 NZ_JPQY01000011.1 RefSeq gene 119332 119916 . - . ID=gene-IY40_RS08470;Name=flhC;gbkey=Gene;gene=flhC;gene_biotype=protein_coding;locus_tag=IY40_RS08470;old_locus_tag=IY40_08620 NZ_JPQY01000011.1 Protein Homology CDS 119332 119916 . - 0 ID=cds-WP_016927281.1;Parent=gene-IY40_RS08470;Dbxref=GenBank:WP_016927281.1;Name=WP_016927281.1;Ontology_term=GO:0045893,GO:1902208,GO:0003677;gbkey=CDS;gene=flhC;go_function=DNA binding|0003677||IEA;go_process=positive regulation of DNA-templated transcription|0045893||IEA,regulation of bacterial-type flagellum assembly|1902208||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016927281.1;locus_tag=IY40_RS08470;product=flagellar transcriptional regulator FlhC;protein_id=WP_016927281.1;transl_table=11 NZ_JPQY01000011.1 RefSeq gene 119916 120266 . - . ID=gene-IY40_RS08475;Name=flhD;gbkey=Gene;gene=flhD;gene_biotype=protein_coding;locus_tag=IY40_RS08475;old_locus_tag=IY40_08625 NZ_JPQY01000011.1 Protein Homology CDS 119916 120266 . - 0 ID=cds-WP_004934891.1;Parent=gene-IY40_RS08475;Dbxref=GenBank:WP_004934891.1;Name=WP_004934891.1;Ontology_term=GO:0045893,GO:1902208,GO:0003677;gbkey=CDS;gene=flhD;go_function=DNA binding|0003677||IEA;go_process=positive regulation of DNA-templated transcription|0045893||IEA,regulation of bacterial-type flagellum assembly|1902208||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010847229.1;locus_tag=IY40_RS08475;product=flagellar transcriptional regulator FlhD;protein_id=WP_004934891.1;transl_table=11 NZ_JPQY01000011.1 RefSeq gene 121605 121820 . + . ID=gene-IY40_RS08485;Name=ydgT;gbkey=Gene;gene=ydgT;gene_biotype=protein_coding;locus_tag=IY40_RS08485;old_locus_tag=IY40_08635 NZ_JPQY01000011.1 Protein Homology CDS 121605 121820 . + 0 ID=cds-WP_025303274.1;Parent=gene-IY40_RS08485;Dbxref=GenBank:WP_025303274.1;Name=WP_025303274.1;gbkey=CDS;gene=ydgT;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012145712.1;locus_tag=IY40_RS08485;product=transcription modulator YdgT;protein_id=WP_025303274.1;transl_table=11 NZ_JPQY01000011.1 RefSeq gene 122018 122437 . + . ID=gene-IY40_RS08490;Name=uspC;gbkey=Gene;gene=uspC;gene_biotype=protein_coding;locus_tag=IY40_RS08490;old_locus_tag=IY40_08640 NZ_JPQY01000011.1 Protein Homology CDS 122018 122437 . + 0 ID=cds-WP_025303275.1;Parent=gene-IY40_RS08490;Dbxref=GenBank:WP_025303275.1;Name=WP_025303275.1;gbkey=CDS;gene=uspC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004946159.1;locus_tag=IY40_RS08490;product=universal stress protein UspC;protein_id=WP_025303275.1;transl_table=11 NZ_JPQY01000011.1 RefSeq gene 122523 123554 . + . ID=gene-IY40_RS08495;Name=IY40_RS08495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS08495;old_locus_tag=IY40_08645 NZ_JPQY01000011.1 Protein Homology CDS 122523 123554 . + 0 ID=cds-WP_025303276.1;Parent=gene-IY40_RS08495;Dbxref=GenBank:WP_025303276.1;Name=WP_025303276.1;Ontology_term=GO:0016628;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors%2C NAD or NADP as acceptor|0016628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016927277.1;locus_tag=IY40_RS08495;product=NADP-dependent oxidoreductase;protein_id=WP_025303276.1;transl_table=11 NZ_JPQY01000011.1 RefSeq gene 123589 124236 . - . ID=gene-IY40_RS08500;Name=pcp;gbkey=Gene;gene=pcp;gene_biotype=protein_coding;locus_tag=IY40_RS08500;old_locus_tag=IY40_08650 NZ_JPQY01000011.1 Protein Homology CDS 123589 124236 . - 0 ID=cds-WP_043138762.1;Parent=gene-IY40_RS08500;Dbxref=GenBank:WP_043138762.1;Name=WP_043138762.1;Ontology_term=GO:0006508,GO:0008234,GO:0016920,GO:0005829;gbkey=CDS;gene=pcp;go_component=cytosol|0005829||IEA;go_function=cysteine-type peptidase activity|0008234||IEA,pyroglutamyl-peptidase activity|0016920||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004934904.1;locus_tag=IY40_RS08500;product=pyroglutamyl-peptidase I;protein_id=WP_043138762.1;transl_table=11 NZ_JPQY01000011.1 RefSeq gene 124334 125266 . + . ID=gene-IY40_RS08505;Name=IY40_RS08505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS08505;old_locus_tag=IY40_08655 NZ_JPQY01000011.1 Protein Homology CDS 124334 125266 . + 0 ID=cds-WP_043138664.1;Parent=gene-IY40_RS08505;Dbxref=GenBank:WP_043138664.1;Name=WP_043138664.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012145716.1;locus_tag=IY40_RS08505;product=LysR family transcriptional regulator;protein_id=WP_043138664.1;transl_table=11 NZ_JPQY01000011.1 RefSeq gene 125779 128118 . + . ID=gene-IY40_RS08510;Name=IY40_RS08510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS08510;old_locus_tag=IY40_08660 NZ_JPQY01000011.1 Protein Homology CDS 125779 128118 . + 0 ID=cds-WP_043138667.1;Parent=gene-IY40_RS08510;Dbxref=GenBank:WP_043138667.1;Name=WP_043138667.1;Ontology_term=GO:0033103,GO:0033104;gbkey=CDS;go_component=type VI protein secretion system complex|0033104||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015378271.1;locus_tag=IY40_RS08510;product=type VI secretion system Vgr family protein;protein_id=WP_043138667.1;transl_table=11 NZ_JPQY01000011.1 RefSeq gene 128129 128518 . + . ID=gene-IY40_RS08515;Name=IY40_RS08515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS08515;old_locus_tag=IY40_08665 NZ_JPQY01000011.1 Protein Homology CDS 128129 128518 . + 0 ID=cds-WP_025303280.1;Parent=gene-IY40_RS08515;Dbxref=GenBank:WP_025303280.1;Name=WP_025303280.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004934914.1;locus_tag=IY40_RS08515;product=DUF3592 domain-containing protein;protein_id=WP_025303280.1;transl_table=11 NZ_JPQY01000011.1 RefSeq gene 128619 129119 . + . ID=gene-IY40_RS08520;Name=IY40_RS08520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS08520;old_locus_tag=IY40_08670 NZ_JPQY01000011.1 Protein Homology CDS 128619 129119 . + 0 ID=cds-WP_043138670.1;Parent=gene-IY40_RS08520;Dbxref=GenBank:WP_043138670.1;Name=WP_043138670.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004934918.1;locus_tag=IY40_RS08520;product=hypothetical protein;protein_id=WP_043138670.1;transl_table=11 NZ_JPQY01000011.1 RefSeq gene 129291 131843 . + . ID=gene-IY40_RS08525;Name=IY40_RS08525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS08525;old_locus_tag=IY40_08675 NZ_JPQY01000011.1 Protein Homology CDS 129291 131843 . + 0 ID=cds-WP_043138672.1;Parent=gene-IY40_RS08525;Dbxref=GenBank:WP_043138672.1;Name=WP_043138672.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016927270.1;locus_tag=IY40_RS08525;product=DUF2169 family type VI secretion system accessory protein;protein_id=WP_043138672.1;transl_table=11 NZ_JPQY01000011.1 RefSeq gene 131840 132907 . + . ID=gene-IY40_RS08530;Name=IY40_RS08530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS08530;old_locus_tag=IY40_08680 NZ_JPQY01000011.1 Protein Homology CDS 131840 132907 . + 0 ID=cds-WP_043138675.1;Parent=gene-IY40_RS08530;Dbxref=GenBank:WP_043138675.1;Name=WP_043138675.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019452980.1;locus_tag=IY40_RS08530;product=pentapeptide repeat-containing protein;protein_id=WP_043138675.1;transl_table=11 NZ_JPQY01000011.1 RefSeq gene 132938 133573 . + . ID=gene-IY40_RS08535;Name=IY40_RS08535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS08535;old_locus_tag=IY40_08685 NZ_JPQY01000011.1 Protein Homology CDS 132938 133573 . + 0 ID=cds-WP_025303284.1;Parent=gene-IY40_RS08535;Dbxref=GenBank:WP_025303284.1;Name=WP_025303284.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004934929.1;locus_tag=IY40_RS08535;product=DUF3540 domain-containing protein;protein_id=WP_025303284.1;transl_table=11 NZ_JPQY01000011.1 RefSeq gene 133590 133982 . + . ID=gene-IY40_RS08540;Name=IY40_RS08540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS08540;old_locus_tag=IY40_08690 NZ_JPQY01000011.1 Protein Homology CDS 133590 133982 . + 0 ID=cds-WP_004934933.1;Parent=gene-IY40_RS08540;Dbxref=GenBank:WP_004934933.1;Name=WP_004934933.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004957110.1;locus_tag=IY40_RS08540;product=DUF4150 domain-containing protein;protein_id=WP_004934933.1;transl_table=11 NZ_JPQY01000011.1 RefSeq gene 134031 134531 . + . ID=gene-IY40_RS08545;Name=tagV;gbkey=Gene;gene=tagV;gene_biotype=protein_coding;locus_tag=IY40_RS08545;old_locus_tag=IY40_08695 NZ_JPQY01000011.1 Protein Homology CDS 134031 134531 . + 0 ID=cds-WP_025303285.1;Parent=gene-IY40_RS08545;Dbxref=GenBank:WP_025303285.1;Name=WP_025303285.1;gbkey=CDS;gene=tagV;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015378276.1;locus_tag=IY40_RS08545;product=type VI secretion system accessory protein TagV;protein_id=WP_025303285.1;transl_table=11 NZ_JPQY01000011.1 RefSeq gene 134561 135091 . + . ID=gene-IY40_RS08550;Name=tssJ;gbkey=Gene;gene=tssJ;gene_biotype=protein_coding;locus_tag=IY40_RS08550;old_locus_tag=IY40_08700 NZ_JPQY01000011.1 Protein Homology CDS 134561 135091 . + 0 ID=cds-WP_049209066.1;Parent=gene-IY40_RS08550;Dbxref=GenBank:WP_049209066.1;Name=WP_049209066.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssJ;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015378277.1;locus_tag=IY40_RS08550;product=type VI secretion system lipoprotein TssJ;protein_id=WP_049209066.1;transl_table=11 NZ_JPQY01000011.1 RefSeq gene 135132 136478 . + . ID=gene-IY40_RS08555;Name=tssK;gbkey=Gene;gene=tssK;gene_biotype=protein_coding;locus_tag=IY40_RS08555;old_locus_tag=IY40_08705 NZ_JPQY01000011.1 Protein Homology CDS 135132 136478 . + 0 ID=cds-WP_025303287.1;Parent=gene-IY40_RS08555;Dbxref=GenBank:WP_025303287.1;Name=WP_025303287.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssK;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015672858.1;locus_tag=IY40_RS08555;product=type VI secretion system baseplate subunit TssK;protein_id=WP_025303287.1;transl_table=11 NZ_JPQY01000011.1 RefSeq gene 136500 137702 . + . ID=gene-IY40_RS08560;Name=IY40_RS08560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS08560;old_locus_tag=IY40_08710 NZ_JPQY01000011.1 Protein Homology CDS 136500 137702 . + 0 ID=cds-WP_049272050.1;Parent=gene-IY40_RS08560;Dbxref=GenBank:WP_049272050.1;Name=WP_049272050.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016927264.1;locus_tag=IY40_RS08560;product=DotU family type VI secretion system protein;protein_id=WP_049272050.1;transl_table=11 NZ_JPQY01000011.1 RefSeq gene 137702 141337 . + . ID=gene-IY40_RS08565;Name=tssM;gbkey=Gene;gene=tssM;gene_biotype=protein_coding;locus_tag=IY40_RS08565;old_locus_tag=IY40_08715 NZ_JPQY01000011.1 Protein Homology CDS 137702 141337 . + 0 ID=cds-WP_025303289.1;Parent=gene-IY40_RS08565;Dbxref=GenBank:WP_025303289.1;Name=WP_025303289.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssM;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015378280.1;locus_tag=IY40_RS08565;product=type VI secretion system membrane subunit TssM;protein_id=WP_025303289.1;transl_table=11 NZ_JPQY01000011.1 RefSeq gene 141356 142075 . + . ID=gene-IY40_RS08570;Name=tagF;gbkey=Gene;gene=tagF;gene_biotype=protein_coding;locus_tag=IY40_RS08570;old_locus_tag=IY40_08720 NZ_JPQY01000011.1 Protein Homology CDS 141356 142075 . + 0 ID=cds-WP_025303290.1;Parent=gene-IY40_RS08570;Dbxref=GenBank:WP_025303290.1;Name=WP_025303290.1;gbkey=CDS;gene=tagF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004934950.1;locus_tag=IY40_RS08570;product=type VI secretion system-associated protein TagF;protein_id=WP_025303290.1;transl_table=11 NZ_JPQY01000011.1 RefSeq gene 142099 143130 . + . ID=gene-IY40_RS08575;Name=tssA;gbkey=Gene;gene=tssA;gene_biotype=protein_coding;locus_tag=IY40_RS08575;old_locus_tag=IY40_08725 NZ_JPQY01000011.1 Protein Homology CDS 142099 143130 . + 0 ID=cds-WP_043138678.1;Parent=gene-IY40_RS08575;Dbxref=GenBank:WP_043138678.1;Name=WP_043138678.1;gbkey=CDS;gene=tssA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015378281.1;locus_tag=IY40_RS08575;product=type VI secretion system protein TssA;protein_id=WP_043138678.1;transl_table=11 NZ_JPQY01000011.1 RefSeq gene 143251 143787 . + . ID=gene-IY40_RS08580;Name=tssB;gbkey=Gene;gene=tssB;gene_biotype=protein_coding;locus_tag=IY40_RS08580;old_locus_tag=IY40_08730 NZ_JPQY01000011.1 Protein Homology CDS 143251 143787 . + 0 ID=cds-WP_016927260.1;Parent=gene-IY40_RS08580;Dbxref=GenBank:WP_016927260.1;Name=WP_016927260.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssB;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004934955.1;locus_tag=IY40_RS08580;product=type VI secretion system contractile sheath small subunit;protein_id=WP_016927260.1;transl_table=11 NZ_JPQY01000011.1 RefSeq gene 143791 145296 . + . ID=gene-IY40_RS08585;Name=tssC;gbkey=Gene;gene=tssC;gene_biotype=protein_coding;locus_tag=IY40_RS08585;old_locus_tag=IY40_08735 NZ_JPQY01000011.1 Protein Homology CDS 143791 145296 . + 0 ID=cds-WP_016927259.1;Parent=gene-IY40_RS08585;Dbxref=GenBank:WP_016927259.1;Name=WP_016927259.1;Ontology_term=GO:0033103,GO:0033104;gbkey=CDS;gene=tssC;go_component=type VI protein secretion system complex|0033104||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015672864.1;locus_tag=IY40_RS08585;product=type VI secretion system contractile sheath large subunit;protein_id=WP_016927259.1;transl_table=11 NZ_JPQY01000011.1 RefSeq gene 145364 145747 . + . ID=gene-IY40_RS08590;Name=IY40_RS08590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS08590;old_locus_tag=IY40_08740 NZ_JPQY01000011.1 Protein Homology CDS 145364 145747 . + 0 ID=cds-WP_043138684.1;Parent=gene-IY40_RS08590;Dbxref=GenBank:WP_043138684.1;Name=WP_043138684.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF037472.6;locus_tag=IY40_RS08590;product=Rap1a/Tai family immunity protein;protein_id=WP_043138684.1;transl_table=11 NZ_JPQY01000011.1 RefSeq gene 145744 146235 . + . ID=gene-IY40_RS08595;Name=IY40_RS08595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS08595;old_locus_tag=IY40_08745 NZ_JPQY01000011.1 Protein Homology CDS 145744 146235 . + 0 ID=cds-WP_025303293.1;Parent=gene-IY40_RS08595;Dbxref=GenBank:WP_025303293.1;Name=WP_025303293.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000803074.1;locus_tag=IY40_RS08595;product=T6SS effector amidase Tae4 family protein;protein_id=WP_025303293.1;transl_table=11 NZ_JPQY01000011.1 RefSeq gene 146262 146690 . + . ID=gene-IY40_RS08600;Name=IY40_RS08600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS08600;old_locus_tag=IY40_08750 NZ_JPQY01000011.1 Protein Homology CDS 146262 146690 . + 0 ID=cds-WP_025303294.1;Parent=gene-IY40_RS08600;Dbxref=GenBank:WP_025303294.1;Name=WP_025303294.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004961374.1;locus_tag=IY40_RS08600;product=T6SS amidase immunity protein Tai4 family protein;protein_id=WP_025303294.1;transl_table=11 NZ_JPQY01000011.1 RefSeq gene 146886 147368 . + . ID=gene-IY40_RS08605;Name=IY40_RS08605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS08605;old_locus_tag=IY40_08755 NZ_JPQY01000011.1 Protein Homology CDS 146886 147368 . + 0 ID=cds-WP_004961372.1;Parent=gene-IY40_RS08605;Dbxref=GenBank:WP_004961372.1;Name=WP_004961372.1;Ontology_term=GO:0033103;gbkey=CDS;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015366565.1;locus_tag=IY40_RS08605;product=Hcp family type VI secretion system effector;protein_id=WP_004961372.1;transl_table=11 NZ_JPQY01000011.1 RefSeq gene 147450 148244 . + . ID=gene-IY40_RS25170;Name=IY40_RS25170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS25170;old_locus_tag=IY40_08760 NZ_JPQY01000011.1 Protein Homology CDS 147450 148244 . + 0 ID=cds-WP_043138771.1;Parent=gene-IY40_RS25170;Dbxref=GenBank:WP_043138771.1;Name=WP_043138771.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015672870.1;locus_tag=IY40_RS25170;product=lysozyme inhibitor LprI family protein;protein_id=WP_043138771.1;transl_table=11 NZ_JPQY01000011.1 RefSeq gene 148222 148596 . + . ID=gene-IY40_RS08615;Name=IY40_RS08615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS08615;old_locus_tag=IY40_08765 NZ_JPQY01000011.1 Protein Homology CDS 148222 148596 . + 0 ID=cds-WP_050505144.1;Parent=gene-IY40_RS08615;Dbxref=GenBank:WP_050505144.1;Name=WP_050505144.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015378285.1;locus_tag=IY40_RS08615;product=T6SS amidase immunity protein Tai4 family protein;protein_id=WP_050505144.1;transl_table=11 NZ_JPQY01000011.1 RefSeq gene 148658 149419 . + . ID=gene-IY40_RS08620;Name=IY40_RS08620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS08620;old_locus_tag=IY40_08770 NZ_JPQY01000011.1 Protein Homology CDS 148658 149419 . + 0 ID=cds-WP_043138696.1;Parent=gene-IY40_RS08620;Dbxref=GenBank:WP_043138696.1;Name=WP_043138696.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015378286.1;locus_tag=IY40_RS08620;product=DUF4225 domain-containing protein;protein_id=WP_043138696.1;transl_table=11 NZ_JPQY01000011.1 RefSeq gene 149951 151693 . + . ID=gene-IY40_RS08630;Name=tagH;gbkey=Gene;gene=tagH;gene_biotype=protein_coding;locus_tag=IY40_RS08630;old_locus_tag=IY40_08780 NZ_JPQY01000011.1 Protein Homology CDS 149951 151693 . + 0 ID=cds-WP_043138702.1;Parent=gene-IY40_RS08630;Dbxref=GenBank:WP_043138702.1;Name=WP_043138702.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tagH;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016927253.1;locus_tag=IY40_RS08630;product=type VI secretion system-associated FHA domain protein TagH;protein_id=WP_043138702.1;transl_table=11 NZ_JPQY01000011.1 RefSeq gene 151693 152466 . + . ID=gene-IY40_RS08635;Name=IY40_RS08635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS08635;old_locus_tag=IY40_08785 NZ_JPQY01000011.1 Protein Homology CDS 151693 152466 . + 0 ID=cds-WP_025303297.1;Parent=gene-IY40_RS08635;Dbxref=GenBank:WP_025303297.1;Name=WP_025303297.1;Ontology_term=GO:0006470,GO:0004722,GO:0046872;gbkey=CDS;go_function=protein serine/threonine phosphatase activity|0004722||IEA,metal ion binding|0046872||IEA;go_process=protein dephosphorylation|0006470||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004934976.1;locus_tag=IY40_RS08635;product=PP2C family protein-serine/threonine phosphatase;protein_id=WP_025303297.1;transl_table=11 NZ_JPQY01000011.1 RefSeq gene 152495 153481 . + . ID=gene-IY40_RS08640;Name=IY40_RS08640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS08640;old_locus_tag=IY40_08790 NZ_JPQY01000011.1 Protein Homology CDS 152495 153481 . + 0 ID=cds-WP_043138706.1;Parent=gene-IY40_RS08640;Dbxref=GenBank:WP_043138706.1;Name=WP_043138706.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019453000.1;locus_tag=IY40_RS08640;product=double-strand break repair protein MRE11;protein_id=WP_043138706.1;transl_table=11 NZ_JPQY01000011.1 RefSeq gene 153497 154318 . + . ID=gene-IY40_RS08645;Name=IY40_RS08645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS08645;old_locus_tag=IY40_08795 NZ_JPQY01000011.1 Protein Homology CDS 153497 154318 . + 0 ID=cds-WP_043138708.1;Parent=gene-IY40_RS08645;Dbxref=GenBank:WP_043138708.1;Name=WP_043138708.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015378291.1;locus_tag=IY40_RS08645;product=type VI secretion system accessory protein TagJ;protein_id=WP_043138708.1;transl_table=11 NZ_JPQY01000011.1 RefSeq gene 154321 154896 . + . ID=gene-IY40_RS08650;Name=IY40_RS08650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS08650;old_locus_tag=IY40_08800 NZ_JPQY01000011.1 Protein Homology CDS 154321 154896 . + 0 ID=cds-WP_043138711.1;Parent=gene-IY40_RS08650;Dbxref=GenBank:WP_043138711.1;Name=WP_043138711.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004934985.1;locus_tag=IY40_RS08650;product=type VI secretion system baseplate subunit TssE;protein_id=WP_043138711.1;transl_table=11 NZ_JPQY01000011.1 RefSeq gene 154901 156787 . + . ID=gene-IY40_RS08655;Name=tssF;gbkey=Gene;gene=tssF;gene_biotype=protein_coding;locus_tag=IY40_RS08655;old_locus_tag=IY40_08805 NZ_JPQY01000011.1 Protein Homology CDS 154901 156787 . + 0 ID=cds-WP_043138714.1;Parent=gene-IY40_RS08655;Dbxref=GenBank:WP_043138714.1;Name=WP_043138714.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssF;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019453003.1;locus_tag=IY40_RS08655;product=type VI secretion system baseplate subunit TssF;protein_id=WP_043138714.1;transl_table=11 NZ_JPQY01000011.1 RefSeq gene 156784 157854 . + . ID=gene-IY40_RS08660;Name=tssG;gbkey=Gene;gene=tssG;gene_biotype=protein_coding;locus_tag=IY40_RS08660;old_locus_tag=IY40_08810 NZ_JPQY01000011.1 Protein Homology CDS 156784 157854 . + 0 ID=cds-WP_049206010.1;Parent=gene-IY40_RS08660;Dbxref=GenBank:WP_049206010.1;Name=WP_049206010.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssG;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015378293.1;locus_tag=IY40_RS08660;product=type VI secretion system baseplate subunit TssG;protein_id=WP_049206010.1;transl_table=11 NZ_JPQY01000011.1 RefSeq gene 157911 160565 . + . ID=gene-IY40_RS08665;Name=tssH;gbkey=Gene;gene=tssH;gene_biotype=protein_coding;gene_synonym=clpV;locus_tag=IY40_RS08665;old_locus_tag=IY40_08815 NZ_JPQY01000011.1 Protein Homology CDS 157911 160565 . + 0 ID=cds-WP_043138717.1;Parent=gene-IY40_RS08665;Dbxref=GenBank:WP_043138717.1;Name=WP_043138717.1;Ontology_term=GO:0033103,GO:0016887,GO:0033104;gbkey=CDS;gene=tssH;go_component=type VI protein secretion system complex|0033104||IEA;go_function=ATP hydrolysis activity|0016887||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016927246.1;locus_tag=IY40_RS08665;product=type VI secretion system ATPase TssH;protein_id=WP_043138717.1;transl_table=11 NZ_JPQY01000011.1 RefSeq gene 160615 162060 . + . ID=gene-IY40_RS08670;Name=IY40_RS08670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS08670;old_locus_tag=IY40_08820 NZ_JPQY01000011.1 Protein Homology CDS 160615 162060 . + 0 ID=cds-WP_043138720.1;Parent=gene-IY40_RS08670;Dbxref=GenBank:WP_043138720.1;Name=WP_043138720.1;Ontology_term=GO:0004674,GO:0005524;gbkey=CDS;go_function=protein serine/threonine kinase activity|0004674||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004934996.1;locus_tag=IY40_RS08670;product=serine/threonine protein kinase;protein_id=WP_043138720.1;transl_table=11 NZ_JPQY01000011.1 RefSeq gene 162203 164131 . + . ID=gene-IY40_RS08675;Name=IY40_RS08675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS08675;old_locus_tag=IY40_08825 NZ_JPQY01000011.1 Protein Homology CDS 162203 164131 . + 0 ID=cds-WP_043138722.1;Parent=gene-IY40_RS08675;Dbxref=GenBank:WP_043138722.1;Name=WP_043138722.1;Ontology_term=GO:0033103,GO:0033104;gbkey=CDS;go_component=type VI protein secretion system complex|0033104||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017893261.1;locus_tag=IY40_RS08675;product=type VI secretion system Vgr family protein;protein_id=WP_043138722.1;transl_table=11 NZ_JPQY01000011.1 RefSeq gene 164186 164626 . + . ID=gene-IY40_RS08680;Name=IY40_RS08680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS08680;old_locus_tag=IY40_08830 NZ_JPQY01000011.1 Protein Homology CDS 164186 164626 . + 0 ID=cds-WP_043138725.1;Parent=gene-IY40_RS08680;Dbxref=GenBank:WP_043138725.1;Name=WP_043138725.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016927243.1;locus_tag=IY40_RS08680;product=DcrB-related protein;protein_id=WP_043138725.1;transl_table=11 NZ_JPQY01000011.1 RefSeq gene 164629 169050 . + . ID=gene-IY40_RS08685;Name=IY40_RS08685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS08685 NZ_JPQY01000011.1 Protein Homology CDS 164629 169050 . + 0 ID=cds-WP_050505145.1;Parent=gene-IY40_RS08685;Dbxref=GenBank:WP_050505145.1;Name=WP_050505145.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017893263.1;locus_tag=IY40_RS08685;product=RHS repeat-associated core domain-containing protein;protein_id=WP_050505145.1;transl_table=11 NZ_JPQY01000011.1 RefSeq gene 169052 169540 . + . ID=gene-IY40_RS25910;Name=IY40_RS25910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS25910 NZ_JPQY01000011.1 GeneMarkS-2+ CDS 169052 169540 . + 0 ID=cds-WP_071826121.1;Parent=gene-IY40_RS25910;Dbxref=GenBank:WP_071826121.1;Name=WP_071826121.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IY40_RS25910;product=hypothetical protein;protein_id=WP_071826121.1;transl_table=11 NZ_JPQY01000011.1 RefSeq gene 169718 170095 . + . ID=gene-IY40_RS08690;Name=IY40_RS08690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS08690;old_locus_tag=IY40_08840 NZ_JPQY01000011.1 GeneMarkS-2+ CDS 169718 170095 . + 0 ID=cds-WP_025303308.1;Parent=gene-IY40_RS08690;Dbxref=GenBank:WP_025303308.1;Name=WP_025303308.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IY40_RS08690;product=hypothetical protein;protein_id=WP_025303308.1;transl_table=11 NZ_JPQY01000011.1 RefSeq gene 170149 170847 . + . ID=gene-IY40_RS08695;Name=IY40_RS08695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS08695;old_locus_tag=IY40_08845 NZ_JPQY01000011.1 Protein Homology CDS 170149 170847 . + 0 ID=cds-WP_043138728.1;Parent=gene-IY40_RS08695;Dbxref=GenBank:WP_043138728.1;Name=WP_043138728.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000835597.1;locus_tag=IY40_RS08695;product=hypothetical protein;protein_id=WP_043138728.1;transl_table=11 NZ_JPQY01000011.1 RefSeq gene 170945 171412 . - . ID=gene-IY40_RS08700;Name=sbmC;gbkey=Gene;gene=sbmC;gene_biotype=protein_coding;locus_tag=IY40_RS08700;old_locus_tag=IY40_08850 NZ_JPQY01000011.1 Protein Homology CDS 170945 171412 . - 0 ID=cds-WP_043138732.1;Parent=gene-IY40_RS08700;Dbxref=GenBank:WP_043138732.1;Name=WP_043138732.1;gbkey=CDS;gene=sbmC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019453008.1;locus_tag=IY40_RS08700;product=DNA gyrase inhibitor SbmC;protein_id=WP_043138732.1;transl_table=11 NZ_JPQY01000011.1 RefSeq gene 171436 172278 . - . ID=gene-IY40_RS08705;Name=kynA;gbkey=Gene;gene=kynA;gene_biotype=protein_coding;locus_tag=IY40_RS08705;old_locus_tag=IY40_08855 NZ_JPQY01000011.1 Protein Homology CDS 171436 172278 . - 0 ID=cds-WP_025303311.1;Parent=gene-IY40_RS08705;Dbxref=GenBank:WP_025303311.1;Name=WP_025303311.1;Ontology_term=GO:0019441,GO:0004833;gbkey=CDS;gene=kynA;go_function=L-tryptophan 2%2C3-dioxygenase activity|0004833||IEA;go_process=L-tryptophan catabolic process to kynurenine|0019441||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019453009.1;locus_tag=IY40_RS08705;product=tryptophan 2%2C3-dioxygenase;protein_id=WP_025303311.1;transl_table=11 NZ_JPQY01000011.1 RefSeq gene 172576 173610 . + . ID=gene-IY40_RS08710;Name=IY40_RS08710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS08710;old_locus_tag=IY40_08860 NZ_JPQY01000011.1 Protein Homology CDS 172576 173610 . + 0 ID=cds-WP_025303312.1;Parent=gene-IY40_RS08710;Dbxref=GenBank:WP_025303312.1;Name=WP_025303312.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015378299.1;locus_tag=IY40_RS08710;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_025303312.1;transl_table=11 NZ_JPQY01000011.1 RefSeq gene 173881 175116 . + . ID=gene-IY40_RS08720;Name=IY40_RS08720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS08720;old_locus_tag=IY40_08870 NZ_JPQY01000011.1 Protein Homology CDS 173881 175116 . + 0 ID=cds-WP_016927236.1;Parent=gene-IY40_RS08720;Dbxref=GenBank:WP_016927236.1;Name=WP_016927236.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004935019.1;locus_tag=IY40_RS08720;product=MFS transporter;protein_id=WP_016927236.1;transl_table=11 NZ_JPQY01000011.1 RefSeq gene 175138 175902 . + . ID=gene-IY40_RS08725;Name=IY40_RS08725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS08725;old_locus_tag=IY40_08875 NZ_JPQY01000011.1 Protein Homology CDS 175138 175902 . + 0 ID=cds-WP_043138736.1;Parent=gene-IY40_RS08725;Dbxref=GenBank:WP_043138736.1;Name=WP_043138736.1;Ontology_term=GO:0016491,GO:0070403;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004935023.1;locus_tag=IY40_RS08725;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_043138736.1;transl_table=11 NZ_JPQY01000011.1 RefSeq gene 175951 176367 . + . ID=gene-IY40_RS08730;Name=IY40_RS08730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS08730;old_locus_tag=IY40_08880 NZ_JPQY01000011.1 Protein Homology CDS 175951 176367 . + 0 ID=cds-WP_043138738.1;Parent=gene-IY40_RS08730;Dbxref=GenBank:WP_043138738.1;Name=WP_043138738.1;Ontology_term=GO:0005996,GO:0016853,GO:0048029;gbkey=CDS;go_function=isomerase activity|0016853||IEA,monosaccharide binding|0048029||IEA;go_process=monosaccharide metabolic process|0005996||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004935027.1;locus_tag=IY40_RS08730;product=RbsD/FucU domain-containing protein;protein_id=WP_043138738.1;transl_table=11 NZ_JPQY01000011.1 RefSeq gene 176418 177152 . - . ID=gene-IY40_RS08735;Name=IY40_RS08735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS08735;old_locus_tag=IY40_08885 NZ_JPQY01000011.1 Protein Homology CDS 176418 177152 . - 0 ID=cds-WP_043138741.1;Parent=gene-IY40_RS08735;Dbxref=GenBank:WP_043138741.1;Name=WP_043138741.1;Ontology_term=GO:0009058;gbkey=CDS;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: protein motif:HMM:NF013166.6;locus_tag=IY40_RS08735;product=thioesterase II family protein;protein_id=WP_043138741.1;transl_table=11 NZ_JPQY01000011.1 RefSeq gene 177299 193345 . - . ID=gene-IY40_RS08740;Name=IY40_RS08740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS08740;old_locus_tag=IY40_08890 NZ_JPQY01000011.1 Protein Homology CDS 177299 193345 . - 0 ID=cds-WP_043138744.1;Parent=gene-IY40_RS08740;Dbxref=GenBank:WP_043138744.1;Name=WP_043138744.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF003417.0;locus_tag=IY40_RS08740;product=hybrid non-ribosomal peptide synthetase/type I polyketide synthase;protein_id=WP_043138744.1;transl_table=11 NZ_JPQY01000011.1 RefSeq gene 193345 200475 . - . ID=gene-IY40_RS08745;Name=IY40_RS08745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS08745;old_locus_tag=IY40_08895 NZ_JPQY01000011.1 Protein Homology CDS 193345 200475 . - 0 ID=cds-WP_043138748.1;Parent=gene-IY40_RS08745;Dbxref=GenBank:WP_043138748.1;Name=WP_043138748.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF003417.0;locus_tag=IY40_RS08745;product=non-ribosomal peptide synthetase;protein_id=WP_043138748.1;transl_table=11 NZ_JPQY01000011.1 RefSeq gene 200497 201408 . - . ID=gene-IY40_RS08750;Name=IY40_RS08750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS08750;old_locus_tag=IY40_08900 NZ_JPQY01000011.1 Protein Homology CDS 200497 201408 . - 0 ID=cds-WP_025303319.1;Parent=gene-IY40_RS08750;Dbxref=GenBank:WP_025303319.1;Name=WP_025303319.1;Ontology_term=GO:0032259,GO:0008168,GO:0008757,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: protein motif:HMM:NF013382.6;locus_tag=IY40_RS08750;product=class I SAM-dependent methyltransferase;protein_id=WP_025303319.1;transl_table=11 NZ_JPQY01000011.1 RefSeq gene 201423 202379 . - . ID=gene-IY40_RS08755;Name=IY40_RS08755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS08755;old_locus_tag=IY40_08905 NZ_JPQY01000011.1 Protein Homology CDS 201423 202379 . - 0 ID=cds-WP_025303320.1;Parent=gene-IY40_RS08755;Dbxref=GenBank:WP_025303320.1;Name=WP_025303320.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF023015.6;locus_tag=IY40_RS08755;product=diiron oxygenase;protein_id=WP_025303320.1;transl_table=11 NZ_JPQY01000011.1 RefSeq gene 202478 203659 . - . ID=gene-IY40_RS08760;Name=IY40_RS08760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS08760;old_locus_tag=IY40_08910 NZ_JPQY01000011.1 Protein Homology CDS 202478 203659 . - 0 ID=cds-WP_050505146.1;Parent=gene-IY40_RS08760;Dbxref=GenBank:WP_050505146.1;Name=WP_050505146.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF019310.6;locus_tag=IY40_RS08760;product=MFS transporter;protein_id=WP_050505146.1;transl_table=11 NZ_JPQY01000011.1 RefSeq gene 203964 205127 . - . ID=gene-IY40_RS08765;Name=IY40_RS08765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS08765;old_locus_tag=IY40_08915 NZ_JPQY01000011.1 Protein Homology CDS 203964 205127 . - 0 ID=cds-WP_225735639.1;Parent=gene-IY40_RS08765;Dbxref=GenBank:WP_225735639.1;Name=WP_225735639.1;Ontology_term=GO:0019835,GO:0031640,GO:0050829,GO:0140911,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=pore-forming activity|0140911||IEA;go_process=cytolysis|0019835||IEA,killing of cells of another organism|0031640||IEA,defense response to Gram-negative bacterium|0050829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004935030.1;locus_tag=IY40_RS08765;product=colicin-like pore-forming protein;protein_id=WP_225735639.1;transl_table=11 NZ_JPQY01000011.1 RefSeq gene 205619 206698 . + . ID=gene-IY40_RS26240;Name=IY40_RS26240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS26240;old_locus_tag=IY40_08920 NZ_JPQY01000011.1 Protein Homology CDS 205619 206698 . + 0 ID=cds-WP_038876720.1;Parent=gene-IY40_RS26240;Dbxref=GenBank:WP_038876720.1;Name=WP_038876720.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015378304.1;locus_tag=IY40_RS26240;product=transketolase-like TK C-terminal-containing protein;protein_id=WP_038876720.1;transl_table=11 NZ_JPQY01000011.1 RefSeq gene 206699 207136 . - . ID=gene-IY40_RS08775;Name=IY40_RS08775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS08775;old_locus_tag=IY40_08925 NZ_JPQY01000011.1 Protein Homology CDS 206699 207136 . - 0 ID=cds-WP_025303324.1;Parent=gene-IY40_RS08775;Dbxref=GenBank:WP_025303324.1;Name=WP_025303324.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004935035.1;locus_tag=IY40_RS08775;product=MarR family winged helix-turn-helix transcriptional regulator;protein_id=WP_025303324.1;transl_table=11 NZ_JPQY01000011.1 RefSeq gene 207291 209966 . + . ID=gene-IY40_RS08780;Name=aceE;gbkey=Gene;gene=aceE;gene_biotype=protein_coding;locus_tag=IY40_RS08780;old_locus_tag=IY40_08930 NZ_JPQY01000011.1 Protein Homology CDS 207291 209966 . + 0 ID=cds-WP_043138755.1;Parent=gene-IY40_RS08780;Dbxref=GenBank:WP_043138755.1;Name=WP_043138755.1;Ontology_term=GO:0006086,GO:0004739,GO:0045254;gbkey=CDS;gene=aceE;go_component=pyruvate dehydrogenase complex|0045254||IEA;go_function=pyruvate dehydrogenase (acetyl-transferring) activity|0004739||IEA;go_process=pyruvate decarboxylation to acetyl-CoA|0006086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004935041.1;locus_tag=IY40_RS08780;product=pyruvate dehydrogenase (acetyl-transferring)%2C homodimeric type;protein_id=WP_043138755.1;transl_table=11 NZ_JPQY01000011.1 RefSeq pseudogene 209994 211217 . - . ID=gene-IY40_RS08785;Name=umuC;end_range=211217,.;gbkey=Gene;gene=umuC;gene_biotype=pseudogene;locus_tag=IY40_RS08785;old_locus_tag=IY40_08935;partial=true;pseudo=true NZ_JPQY01000011.1 Protein Homology CDS 209994 211217 . - 0 ID=cds-IY40_RS08785;Parent=gene-IY40_RS08785;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006281,GO:0003684;end_range=211217,.;gbkey=CDS;gene=umuC;go_function=damaged DNA binding|0003684||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015378307.1;locus_tag=IY40_RS08785;partial=true;product=translesion error-prone DNA polymerase V subunit UmuC;pseudo=true;transl_table=11 NZ_JPQY01000011.1 RefSeq gene 211461 211921 . - . ID=gene-IY40_RS25920;Name=IY40_RS25920;end_range=211921,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS25920;partial=true NZ_JPQY01000011.1 Protein Homology CDS 211461 211921 . - 2 ID=cds-WP_152561292.1;Parent=gene-IY40_RS25920;Dbxref=GenBank:WP_152561292.1;Name=WP_152561292.1;Ontology_term=GO:0009058,GO:0030170;end_range=211921,.;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: protein motif:HMM:NF012382.6;locus_tag=IY40_RS25920;partial=true;product=aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme;protein_id=WP_152561292.1;transl_table=11 ##sequence-region NZ_JPQY01000012.1 1 204000 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=615 NZ_JPQY01000012.1 RefSeq region 1 204000 . + . ID=NZ_JPQY01000012.1:1..204000;Dbxref=taxon:615;collected-by=Mahloro H. Serepa%3B Vincent M. Gray;collection-date=2013-04-11;country=South Africa: North West Province;gbkey=Src;genome=genomic;identified-by=Mahloro H. Serepa%3B Vincent M. Gray;isolation-source=entomopathogenic nematode Oscheius sp. MCB living in soil;mol_type=genomic DNA;nat-host=Oscheius sp. MCB;strain=MCB NZ_JPQY01000012.1 RefSeq gene 310 852 . + . ID=gene-IY40_RS08790;Name=IY40_RS08790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS08790;old_locus_tag=IY40_08945 NZ_JPQY01000012.1 Protein Homology CDS 310 852 . + 0 ID=cds-WP_025304486.1;Parent=gene-IY40_RS08790;Dbxref=GenBank:WP_025304486.1;Name=WP_025304486.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013814780.1;locus_tag=IY40_RS08790;product=gamma carbonic anhydrase family protein;protein_id=WP_025304486.1;transl_table=11 NZ_JPQY01000012.1 RefSeq gene 889 1707 . - . ID=gene-IY40_RS08795;Name=aroE;gbkey=Gene;gene=aroE;gene_biotype=protein_coding;locus_tag=IY40_RS08795;old_locus_tag=IY40_08950 NZ_JPQY01000012.1 Protein Homology CDS 889 1707 . - 0 ID=cds-WP_025304487.1;Parent=gene-IY40_RS08795;Dbxref=GenBank:WP_025304487.1;Name=WP_025304487.1;Ontology_term=GO:0019632,GO:0004764;gbkey=CDS;gene=aroE;go_function=shikimate 3-dehydrogenase (NADP+) activity|0004764||IEA;go_process=shikimate metabolic process|0019632||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006328397.1;locus_tag=IY40_RS08795;product=shikimate dehydrogenase;protein_id=WP_025304487.1;transl_table=11 NZ_JPQY01000012.1 RefSeq gene 1719 2288 . - . ID=gene-IY40_RS08800;Name=tsaC;gbkey=Gene;gene=tsaC;gene_biotype=protein_coding;locus_tag=IY40_RS08800;old_locus_tag=IY40_08955 NZ_JPQY01000012.1 Protein Homology CDS 1719 2288 . - 0 ID=cds-WP_043138821.1;Parent=gene-IY40_RS08800;Dbxref=GenBank:WP_043138821.1;Name=WP_043138821.1;Ontology_term=GO:0002949,GO:0003725,GO:0005524;gbkey=CDS;gene=tsaC;go_function=double-stranded RNA binding|0003725||IEA,ATP binding|0005524||IEA;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004929703.1;locus_tag=IY40_RS08800;product=L-threonylcarbamoyladenylate synthase type 1 TsaC;protein_id=WP_043138821.1;transl_table=11 NZ_JPQY01000012.1 RefSeq gene 2296 2841 . - . ID=gene-IY40_RS08805;Name=IY40_RS08805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS08805;old_locus_tag=IY40_08960 NZ_JPQY01000012.1 Protein Homology CDS 2296 2841 . - 0 ID=cds-WP_025304489.1;Parent=gene-IY40_RS08805;Dbxref=GenBank:WP_025304489.1;Name=WP_025304489.1;Ontology_term=GO:0006265,GO:0003677,GO:0003916,GO:0005694;gbkey=CDS;go_component=chromosome|0005694||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase activity|0003916||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004951100.1;locus_tag=IY40_RS08805;product=DNA topoisomerase family protein;protein_id=WP_025304489.1;transl_table=11 NZ_JPQY01000012.1 RefSeq gene 2867 3340 . - . ID=gene-IY40_RS08810;Name=smg;gbkey=Gene;gene=smg;gene_biotype=protein_coding;locus_tag=IY40_RS08810;old_locus_tag=IY40_08965 NZ_JPQY01000012.1 Protein Homology CDS 2867 3340 . - 0 ID=cds-WP_025160381.1;Parent=gene-IY40_RS08810;Dbxref=GenBank:WP_025160381.1;Name=WP_025160381.1;gbkey=CDS;gene=smg;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312177.1;locus_tag=IY40_RS08810;product=DUF494 family protein Smg;protein_id=WP_025160381.1;transl_table=11 NZ_JPQY01000012.1 RefSeq gene 3312 4433 . - . ID=gene-IY40_RS08815;Name=dprA;gbkey=Gene;gene=dprA;gene_biotype=protein_coding;locus_tag=IY40_RS08815;old_locus_tag=IY40_08970 NZ_JPQY01000012.1 Protein Homology CDS 3312 4433 . - 0 ID=cds-WP_043138824.1;Parent=gene-IY40_RS08815;Dbxref=GenBank:WP_043138824.1;Name=WP_043138824.1;Ontology_term=GO:0009294;gbkey=CDS;gene=dprA;go_process=DNA-mediated transformation|0009294||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011193215.1;locus_tag=IY40_RS08815;product=DNA-protecting protein DprA;protein_id=WP_043138824.1;transl_table=11 NZ_JPQY01000012.1 RefSeq gene 4567 5076 . + . ID=gene-IY40_RS08820;Name=def;gbkey=Gene;gene=def;gene_biotype=protein_coding;locus_tag=IY40_RS08820;old_locus_tag=IY40_08975 NZ_JPQY01000012.1 Protein Homology CDS 4567 5076 . + 0 ID=cds-WP_015379260.1;Parent=gene-IY40_RS08820;Dbxref=GenBank:WP_015379260.1;Name=WP_015379260.1;Ontology_term=GO:0036211,GO:0042586;gbkey=CDS;gene=def;go_function=peptide deformylase activity|0042586||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312179.1;locus_tag=IY40_RS08820;product=peptide deformylase;protein_id=WP_015379260.1;transl_table=11 NZ_JPQY01000012.1 RefSeq gene 5094 6038 . + . ID=gene-IY40_RS08825;Name=fmt;gbkey=Gene;gene=fmt;gene_biotype=protein_coding;locus_tag=IY40_RS08825;old_locus_tag=IY40_08980 NZ_JPQY01000012.1 Protein Homology CDS 5094 6038 . + 0 ID=cds-WP_025304491.1;Parent=gene-IY40_RS08825;Dbxref=GenBank:WP_025304491.1;Name=WP_025304491.1;Ontology_term=GO:0071951,GO:0004479,GO:0005737;gbkey=CDS;gene=fmt;go_component=cytoplasm|0005737||IEA;go_function=methionyl-tRNA formyltransferase activity|0004479||IEA;go_process=conversion of methionyl-tRNA to N-formyl-methionyl-tRNA|0071951||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004929712.1;locus_tag=IY40_RS08825;product=methionyl-tRNA formyltransferase;protein_id=WP_025304491.1;transl_table=11 NZ_JPQY01000012.1 RefSeq gene 6111 7400 . + . ID=gene-IY40_RS08830;Name=rsmB;gbkey=Gene;gene=rsmB;gene_biotype=protein_coding;locus_tag=IY40_RS08830;old_locus_tag=IY40_08985 NZ_JPQY01000012.1 Protein Homology CDS 6111 7400 . + 0 ID=cds-WP_025304492.1;Parent=gene-IY40_RS08830;Dbxref=GenBank:WP_025304492.1;Name=WP_025304492.1;Ontology_term=GO:0001510,GO:0006355,GO:0006364,GO:0003723,GO:0008649;gbkey=CDS;gene=rsmB;go_function=RNA binding|0003723||IEA,rRNA methyltransferase activity|0008649||IEA;go_process=RNA methylation|0001510||IEA,regulation of DNA-templated transcription|0006355||IEA,rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017894247.1;locus_tag=IY40_RS08830;product=16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB;protein_id=WP_025304492.1;transl_table=11 NZ_JPQY01000012.1 RefSeq gene 7456 8832 . + . ID=gene-IY40_RS08835;Name=trkA;gbkey=Gene;gene=trkA;gene_biotype=protein_coding;locus_tag=IY40_RS08835;old_locus_tag=IY40_08990 NZ_JPQY01000012.1 Protein Homology CDS 7456 8832 . + 0 ID=cds-WP_004929716.1;Parent=gene-IY40_RS08835;Dbxref=GenBank:WP_004929716.1;Name=WP_004929716.1;Ontology_term=GO:0006813,GO:0015079,GO:0016020;gbkey=CDS;gene=trkA;go_component=membrane|0016020||IEA;go_function=potassium ion transmembrane transporter activity|0015079||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004125888.1;locus_tag=IY40_RS08835;product=Trk system potassium transporter TrkA;protein_id=WP_004929716.1;transl_table=11 NZ_JPQY01000012.1 RefSeq gene 8970 9386 . + . ID=gene-IY40_RS08840;Name=mscL;gbkey=Gene;gene=mscL;gene_biotype=protein_coding;locus_tag=IY40_RS08840;old_locus_tag=IY40_08995 NZ_JPQY01000012.1 Protein Homology CDS 8970 9386 . + 0 ID=cds-WP_025304493.1;Parent=gene-IY40_RS08840;Dbxref=GenBank:WP_025304493.1;Name=WP_025304493.1;gbkey=CDS;gene=mscL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015379263.1;locus_tag=IY40_RS08840;product=large-conductance mechanosensitive channel protein MscL;protein_id=WP_025304493.1;transl_table=11 NZ_JPQY01000012.1 RefSeq gene 9444 9650 . - . ID=gene-IY40_RS08845;Name=IY40_RS08845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS08845;old_locus_tag=IY40_09000 NZ_JPQY01000012.1 Protein Homology CDS 9444 9650 . - 0 ID=cds-WP_025304494.1;Parent=gene-IY40_RS08845;Dbxref=GenBank:WP_025304494.1;Name=WP_025304494.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004951119.1;locus_tag=IY40_RS08845;product=alternative ribosome-rescue factor A;protein_id=WP_025304494.1;transl_table=11 NZ_JPQY01000012.1 RefSeq gene 9725 10156 . - . ID=gene-IY40_RS08850;Name=zntR;gbkey=Gene;gene=zntR;gene_biotype=protein_coding;locus_tag=IY40_RS08850;old_locus_tag=IY40_09005 NZ_JPQY01000012.1 Protein Homology CDS 9725 10156 . - 0 ID=cds-WP_016930321.1;Parent=gene-IY40_RS08850;Dbxref=GenBank:WP_016930321.1;Name=WP_016930321.1;Ontology_term=GO:0006355,GO:0003677,GO:0008270;gbkey=CDS;gene=zntR;go_function=DNA binding|0003677||IEA,zinc ion binding|0008270||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016930321.1;locus_tag=IY40_RS08850;product=Zn(2+)-responsive transcriptional regulator;protein_id=WP_016930321.1;transl_table=11 NZ_JPQY01000012.1 RefSeq gene 10156 10530 . - . ID=gene-IY40_RS08855;Name=IY40_RS08855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS08855;old_locus_tag=IY40_09010 NZ_JPQY01000012.1 Protein Homology CDS 10156 10530 . - 0 ID=cds-WP_043138827.1;Parent=gene-IY40_RS08855;Dbxref=GenBank:WP_043138827.1;Name=WP_043138827.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004929724.1;locus_tag=IY40_RS08855;product=DnaJ family domain-containing protein;protein_id=WP_043138827.1;transl_table=11 NZ_JPQY01000012.1 RefSeq gene 10679 11068 . - . ID=gene-IY40_RS08860;Name=rplQ;gbkey=Gene;gene=rplQ;gene_biotype=protein_coding;locus_tag=IY40_RS08860;old_locus_tag=IY40_09015 NZ_JPQY01000012.1 Protein Homology CDS 10679 11068 . - 0 ID=cds-WP_004929726.1;Parent=gene-IY40_RS08860;Dbxref=GenBank:WP_004929726.1;Name=WP_004929726.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplQ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004160560.1;locus_tag=IY40_RS08860;product=50S ribosomal protein L17;protein_id=WP_004929726.1;transl_table=11 NZ_JPQY01000012.1 RefSeq gene 11109 12098 . - . ID=gene-IY40_RS08865;Name=IY40_RS08865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS08865;old_locus_tag=IY40_09020 NZ_JPQY01000012.1 Protein Homology CDS 11109 12098 . - 0 ID=cds-WP_002919219.1;Parent=gene-IY40_RS08865;Dbxref=GenBank:WP_002919219.1;Name=WP_002919219.1;Ontology_term=GO:0006351,GO:0003899;gbkey=CDS;go_function=DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005970247.1;locus_tag=IY40_RS08865;product=DNA-directed RNA polymerase subunit alpha;protein_id=WP_002919219.1;transl_table=11 NZ_JPQY01000012.1 RefSeq gene 12124 12744 . - . ID=gene-IY40_RS08870;Name=rpsD;gbkey=Gene;gene=rpsD;gene_biotype=protein_coding;locus_tag=IY40_RS08870;old_locus_tag=IY40_09025 NZ_JPQY01000012.1 Protein Homology CDS 12124 12744 . - 0 ID=cds-WP_025304496.1;Parent=gene-IY40_RS08870;Dbxref=GenBank:WP_025304496.1;Name=WP_025304496.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843,GO:0015935;gbkey=CDS;gene=rpsD;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004410410.1;locus_tag=IY40_RS08870;product=30S ribosomal protein S4;protein_id=WP_025304496.1;transl_table=11 NZ_JPQY01000012.1 RefSeq gene 12775 13164 . - . ID=gene-IY40_RS08875;Name=rpsK;gbkey=Gene;gene=rpsK;gene_biotype=protein_coding;locus_tag=IY40_RS08875;old_locus_tag=IY40_09030 NZ_JPQY01000012.1 Protein Homology CDS 12775 13164 . - 0 ID=cds-WP_004929731.1;Parent=gene-IY40_RS08875;Dbxref=GenBank:WP_004929731.1;Name=WP_004929731.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsK;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001029758.1;locus_tag=IY40_RS08875;product=30S ribosomal protein S11;protein_id=WP_004929731.1;transl_table=11 NZ_JPQY01000012.1 RefSeq gene 13181 13537 . - . ID=gene-IY40_RS08880;Name=rpsM;gbkey=Gene;gene=rpsM;gene_biotype=protein_coding;locus_tag=IY40_RS08880;old_locus_tag=IY40_09035 NZ_JPQY01000012.1 Protein Homology CDS 13181 13537 . - 0 ID=cds-WP_004929734.1;Parent=gene-IY40_RS08880;Dbxref=GenBank:WP_004929734.1;Name=WP_004929734.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsM;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019935869.1;locus_tag=IY40_RS08880;product=30S ribosomal protein S13;protein_id=WP_004929734.1;transl_table=11 NZ_JPQY01000012.1 RefSeq gene 13686 13802 . - . ID=gene-IY40_RS25185;Name=rpmJ;gbkey=Gene;gene=rpmJ;gene_biotype=protein_coding;locus_tag=IY40_RS25185 NZ_JPQY01000012.1 Protein Homology CDS 13686 13802 . - 0 ID=cds-WP_002227352.1;Parent=gene-IY40_RS25185;Dbxref=GenBank:WP_002227352.1;Name=WP_002227352.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmJ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020322760.1;locus_tag=IY40_RS25185;product=50S ribosomal protein L36;protein_id=WP_002227352.1;transl_table=11 NZ_JPQY01000012.1 RefSeq gene 13836 15167 . - . ID=gene-IY40_RS08885;Name=secY;gbkey=Gene;gene=secY;gene_biotype=protein_coding;locus_tag=IY40_RS08885;old_locus_tag=IY40_09040 NZ_JPQY01000012.1 Protein Homology CDS 13836 15167 . - 0 ID=cds-WP_004929740.1;Parent=gene-IY40_RS08885;Dbxref=GenBank:WP_004929740.1;Name=WP_004929740.1;Ontology_term=GO:0015031,GO:0043952,GO:0016020;gbkey=CDS;gene=secY;go_component=membrane|0016020||IEA;go_process=protein transport|0015031||IEA,protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004868351.1;locus_tag=IY40_RS08885;product=preprotein translocase subunit SecY;protein_id=WP_004929740.1;transl_table=11 NZ_JPQY01000012.1 RefSeq gene 15175 15609 . - . ID=gene-IY40_RS08890;Name=rplO;gbkey=Gene;gene=rplO;gene_biotype=protein_coding;locus_tag=IY40_RS08890;old_locus_tag=IY40_09045 NZ_JPQY01000012.1 Protein Homology CDS 15175 15609 . - 0 ID=cds-WP_004929742.1;Parent=gene-IY40_RS08890;Dbxref=GenBank:WP_004929742.1;Name=WP_004929742.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplO;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011095501.1;locus_tag=IY40_RS08890;product=50S ribosomal protein L15;protein_id=WP_004929742.1;transl_table=11 NZ_JPQY01000012.1 RefSeq gene 15613 15792 . - . ID=gene-IY40_RS25190;Name=rpmD;gbkey=Gene;gene=rpmD;gene_biotype=protein_coding;locus_tag=IY40_RS25190 NZ_JPQY01000012.1 Protein Homology CDS 15613 15792 . - 0 ID=cds-WP_048232028.1;Parent=gene-IY40_RS25190;Dbxref=GenBank:WP_048232028.1;Name=WP_048232028.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rpmD;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012147215.1;locus_tag=IY40_RS25190;product=50S ribosomal protein L30;protein_id=WP_048232028.1;transl_table=11 NZ_JPQY01000012.1 RefSeq gene 15799 16299 . - . ID=gene-IY40_RS08895;Name=rpsE;gbkey=Gene;gene=rpsE;gene_biotype=protein_coding;locus_tag=IY40_RS08895;old_locus_tag=IY40_09050 NZ_JPQY01000012.1 Protein Homology CDS 15799 16299 . - 0 ID=cds-WP_004929747.1;Parent=gene-IY40_RS08895;Dbxref=GenBank:WP_004929747.1;Name=WP_004929747.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsE;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002445361.1;locus_tag=IY40_RS08895;product=30S ribosomal protein S5;protein_id=WP_004929747.1;transl_table=11 NZ_JPQY01000012.1 RefSeq gene 16314 16667 . - . ID=gene-IY40_RS08900;Name=rplR;gbkey=Gene;gene=rplR;gene_biotype=protein_coding;locus_tag=IY40_RS08900;old_locus_tag=IY40_09055 NZ_JPQY01000012.1 Protein Homology CDS 16314 16667 . - 0 ID=cds-WP_004929748.1;Parent=gene-IY40_RS08900;Dbxref=GenBank:WP_004929748.1;Name=WP_004929748.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplR;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005970258.1;locus_tag=IY40_RS08900;product=50S ribosomal protein L18;protein_id=WP_004929748.1;transl_table=11 NZ_JPQY01000012.1 RefSeq gene 16677 17210 . - . ID=gene-IY40_RS08905;Name=rplF;gbkey=Gene;gene=rplF;gene_biotype=protein_coding;locus_tag=IY40_RS08905;old_locus_tag=IY40_09060 NZ_JPQY01000012.1 Protein Homology CDS 16677 17210 . - 0 ID=cds-WP_004929751.1;Parent=gene-IY40_RS08905;Dbxref=GenBank:WP_004929751.1;Name=WP_004929751.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843,GO:0005840;gbkey=CDS;gene=rplF;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003031129.1;locus_tag=IY40_RS08905;product=50S ribosomal protein L6;protein_id=WP_004929751.1;transl_table=11 NZ_JPQY01000012.1 RefSeq gene 17225 17617 . - . ID=gene-IY40_RS08910;Name=rpsH;gbkey=Gene;gene=rpsH;gene_biotype=protein_coding;locus_tag=IY40_RS08910;old_locus_tag=IY40_09065 NZ_JPQY01000012.1 Protein Homology CDS 17225 17617 . - 0 ID=cds-WP_004929753.1;Parent=gene-IY40_RS08910;Dbxref=GenBank:WP_004929753.1;Name=WP_004929753.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsH;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011148781.1;locus_tag=IY40_RS08910;product=30S ribosomal protein S8;protein_id=WP_004929753.1;transl_table=11 NZ_JPQY01000012.1 RefSeq gene 17648 17953 . - . ID=gene-IY40_RS08915;Name=rpsN;gbkey=Gene;gene=rpsN;gene_biotype=protein_coding;locus_tag=IY40_RS08915 NZ_JPQY01000012.1 Protein Homology CDS 17648 17953 . - 0 ID=cds-WP_004929754.1;Parent=gene-IY40_RS08915;Dbxref=GenBank:WP_004929754.1;Name=WP_004929754.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsN;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005599304.1;locus_tag=IY40_RS08915;product=30S ribosomal protein S14;protein_id=WP_004929754.1;transl_table=11 NZ_JPQY01000012.1 RefSeq gene 17967 18506 . - . ID=gene-IY40_RS08920;Name=rplE;gbkey=Gene;gene=rplE;gene_biotype=protein_coding;locus_tag=IY40_RS08920;old_locus_tag=IY40_09070 NZ_JPQY01000012.1 Protein Homology CDS 17967 18506 . - 0 ID=cds-WP_004929756.1;Parent=gene-IY40_RS08920;Dbxref=GenBank:WP_004929756.1;Name=WP_004929756.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplE;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001096198.1;locus_tag=IY40_RS08920;product=50S ribosomal protein L5;protein_id=WP_004929756.1;transl_table=11 NZ_JPQY01000012.1 RefSeq gene 18521 18835 . - . ID=gene-IY40_RS08925;Name=rplX;gbkey=Gene;gene=rplX;gene_biotype=protein_coding;locus_tag=IY40_RS08925;old_locus_tag=IY40_09075 NZ_JPQY01000012.1 Protein Homology CDS 18521 18835 . - 0 ID=cds-WP_004929758.1;Parent=gene-IY40_RS08925;Dbxref=GenBank:WP_004929758.1;Name=WP_004929758.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplX;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000729185.1;locus_tag=IY40_RS08925;product=50S ribosomal protein L24;protein_id=WP_004929758.1;transl_table=11 NZ_JPQY01000012.1 RefSeq gene 18845 19216 . - . ID=gene-IY40_RS08930;Name=rplN;gbkey=Gene;gene=rplN;gene_biotype=protein_coding;locus_tag=IY40_RS08930;old_locus_tag=IY40_09080 NZ_JPQY01000012.1 Protein Homology CDS 18845 19216 . - 0 ID=cds-WP_000613954.1;Parent=gene-IY40_RS08930;Dbxref=GenBank:WP_000613954.1;Name=WP_000613954.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplN;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012728338.1;locus_tag=IY40_RS08930;product=50S ribosomal protein L14;protein_id=WP_000613954.1;transl_table=11 NZ_JPQY01000012.1 RefSeq gene 19389 19643 . - . ID=gene-IY40_RS08935;Name=rpsQ;gbkey=Gene;gene=rpsQ;gene_biotype=protein_coding;locus_tag=IY40_RS08935;old_locus_tag=IY40_09085 NZ_JPQY01000012.1 Protein Homology CDS 19389 19643 . - 0 ID=cds-WP_004929760.1;Parent=gene-IY40_RS08935;Dbxref=GenBank:WP_004929760.1;Name=WP_004929760.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsQ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006817275.1;locus_tag=IY40_RS08935;product=30S ribosomal protein S17;protein_id=WP_004929760.1;transl_table=11 NZ_JPQY01000012.1 RefSeq gene 19644 19835 . - . ID=gene-IY40_RS08940;Name=rpmC;gbkey=Gene;gene=rpmC;gene_biotype=protein_coding;locus_tag=IY40_RS08940;old_locus_tag=IY40_09090 NZ_JPQY01000012.1 Protein Homology CDS 19644 19835 . - 0 ID=cds-WP_004929762.1;Parent=gene-IY40_RS08940;Dbxref=GenBank:WP_004929762.1;Name=WP_004929762.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmC;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004929762.1;locus_tag=IY40_RS08940;product=50S ribosomal protein L29;protein_id=WP_004929762.1;transl_table=11 NZ_JPQY01000012.1 RefSeq gene 19835 20245 . - . ID=gene-IY40_RS08945;Name=rplP;gbkey=Gene;gene=rplP;gene_biotype=protein_coding;locus_tag=IY40_RS08945;old_locus_tag=IY40_09095 NZ_JPQY01000012.1 Protein Homology CDS 19835 20245 . - 0 ID=cds-WP_004929764.1;Parent=gene-IY40_RS08945;Dbxref=GenBank:WP_004929764.1;Name=WP_004929764.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843;gbkey=CDS;gene=rplP;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017805229.1;locus_tag=IY40_RS08945;product=50S ribosomal protein L16;protein_id=WP_004929764.1;transl_table=11 NZ_JPQY01000012.1 RefSeq gene 20258 20956 . - . ID=gene-IY40_RS08950;Name=rpsC;gbkey=Gene;gene=rpsC;gene_biotype=protein_coding;locus_tag=IY40_RS08950;old_locus_tag=IY40_09100 NZ_JPQY01000012.1 Protein Homology CDS 20258 20956 . - 0 ID=cds-WP_004929766.1;Parent=gene-IY40_RS08950;Dbxref=GenBank:WP_004929766.1;Name=WP_004929766.1;Ontology_term=GO:0006412,GO:0003735;gbkey=CDS;gene=rpsC;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001742302.1;locus_tag=IY40_RS08950;product=30S ribosomal protein S3;protein_id=WP_004929766.1;transl_table=11 NZ_JPQY01000012.1 RefSeq gene 20974 21306 . - . ID=gene-IY40_RS08955;Name=rplV;gbkey=Gene;gene=rplV;gene_biotype=protein_coding;locus_tag=IY40_RS08955;old_locus_tag=IY40_09105 NZ_JPQY01000012.1 Protein Homology CDS 20974 21306 . - 0 ID=cds-WP_002223844.1;Parent=gene-IY40_RS08955;Dbxref=GenBank:WP_002223844.1;Name=WP_002223844.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplV;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000447526.1;locus_tag=IY40_RS08955;product=50S ribosomal protein L22;protein_id=WP_002223844.1;transl_table=11 NZ_JPQY01000012.1 RefSeq gene 21321 21599 . - . ID=gene-IY40_RS08960;Name=rpsS;gbkey=Gene;gene=rpsS;gene_biotype=protein_coding;locus_tag=IY40_RS08960;old_locus_tag=IY40_09110 NZ_JPQY01000012.1 Protein Homology CDS 21321 21599 . - 0 ID=cds-WP_004929772.1;Parent=gene-IY40_RS08960;Dbxref=GenBank:WP_004929772.1;Name=WP_004929772.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsS;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011148791.1;locus_tag=IY40_RS08960;product=30S ribosomal protein S19;protein_id=WP_004929772.1;transl_table=11 NZ_JPQY01000012.1 RefSeq gene 21614 22438 . - . ID=gene-IY40_RS08965;Name=rplB;gbkey=Gene;gene=rplB;gene_biotype=protein_coding;locus_tag=IY40_RS08965;old_locus_tag=IY40_09115 NZ_JPQY01000012.1 Protein Homology CDS 21614 22438 . - 0 ID=cds-WP_004929775.1;Parent=gene-IY40_RS08965;Dbxref=GenBank:WP_004929775.1;Name=WP_004929775.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0016740,GO:0015934;gbkey=CDS;gene=rplB;go_component=large ribosomal subunit|0015934||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA,transferase activity|0016740||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002213425.1;locus_tag=IY40_RS08965;product=50S ribosomal protein L2;protein_id=WP_004929775.1;transl_table=11 NZ_JPQY01000012.1 RefSeq gene 22457 22759 . - . ID=gene-IY40_RS08970;Name=rplW;gbkey=Gene;gene=rplW;gene_biotype=protein_coding;locus_tag=IY40_RS08970;old_locus_tag=IY40_09120 NZ_JPQY01000012.1 Protein Homology CDS 22457 22759 . - 0 ID=cds-WP_004951179.1;Parent=gene-IY40_RS08970;Dbxref=GenBank:WP_004951179.1;Name=WP_004951179.1;gbkey=CDS;gene=rplW;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007891652.1;locus_tag=IY40_RS08970;product=50S ribosomal protein L23;protein_id=WP_004951179.1;transl_table=11 NZ_JPQY01000012.1 RefSeq gene 22756 23361 . - . ID=gene-IY40_RS08975;Name=rplD;gbkey=Gene;gene=rplD;gene_biotype=protein_coding;locus_tag=IY40_RS08975;old_locus_tag=IY40_09125 NZ_JPQY01000012.1 Protein Homology CDS 22756 23361 . - 0 ID=cds-WP_004929779.1;Parent=gene-IY40_RS08975;Dbxref=GenBank:WP_004929779.1;Name=WP_004929779.1;Ontology_term=GO:0006412,GO:0003735,GO:0022625;gbkey=CDS;gene=rplD;go_component=cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010304939.1;locus_tag=IY40_RS08975;product=50S ribosomal protein L4;protein_id=WP_004929779.1;transl_table=11 NZ_JPQY01000012.1 RefSeq gene 23372 24001 . - . ID=gene-IY40_RS08980;Name=rplC;gbkey=Gene;gene=rplC;gene_biotype=protein_coding;locus_tag=IY40_RS08980;old_locus_tag=IY40_09130 NZ_JPQY01000012.1 Protein Homology CDS 23372 24001 . - 0 ID=cds-WP_015379265.1;Parent=gene-IY40_RS08980;Dbxref=GenBank:WP_015379265.1;Name=WP_015379265.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplC;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000579825.1;locus_tag=IY40_RS08980;product=50S ribosomal protein L3;protein_id=WP_015379265.1;transl_table=11 NZ_JPQY01000012.1 RefSeq gene 24034 24345 . - . ID=gene-IY40_RS08985;Name=rpsJ;gbkey=Gene;gene=rpsJ;gene_biotype=protein_coding;locus_tag=IY40_RS08985;old_locus_tag=IY40_09135 NZ_JPQY01000012.1 Protein Homology CDS 24034 24345 . - 0 ID=cds-WP_001181005.1;Parent=gene-IY40_RS08985;Dbxref=GenBank:WP_001181005.1;Name=WP_001181005.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsJ;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014268624.1;locus_tag=IY40_RS08985;product=30S ribosomal protein S10;protein_id=WP_001181005.1;transl_table=11 NZ_JPQY01000012.1 RefSeq gene 24731 25210 . - . ID=gene-IY40_RS08990;Name=bfr;gbkey=Gene;gene=bfr;gene_biotype=protein_coding;locus_tag=IY40_RS08990;old_locus_tag=IY40_09140 NZ_JPQY01000012.1 Protein Homology CDS 24731 25210 . - 0 ID=cds-WP_019456183.1;Parent=gene-IY40_RS08990;Dbxref=GenBank:WP_019456183.1;Name=WP_019456183.1;Ontology_term=GO:0006879,GO:0004322,GO:0008199;gbkey=CDS;gene=bfr;go_function=ferroxidase activity|0004322||IEA,ferric iron binding|0008199||IEA;go_process=intracellular iron ion homeostasis|0006879||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013814794.1;locus_tag=IY40_RS08990;product=bacterioferritin;protein_id=WP_019456183.1;transl_table=11 NZ_JPQY01000012.1 RefSeq gene 25284 25478 . - . ID=gene-IY40_RS25195;Name=bfd;gbkey=Gene;gene=bfd;gene_biotype=protein_coding;locus_tag=IY40_RS25195 NZ_JPQY01000012.1 Protein Homology CDS 25284 25478 . - 0 ID=cds-WP_015379266.1;Parent=gene-IY40_RS25195;Dbxref=GenBank:WP_015379266.1;Name=WP_015379266.1;gbkey=CDS;gene=bfd;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004702312.1;locus_tag=IY40_RS25195;product=bacterioferritin-associated ferredoxin;protein_id=WP_015379266.1;transl_table=11 NZ_JPQY01000012.1 RefSeq gene 25611 26795 . - . ID=gene-IY40_RS08995;Name=tuf;gbkey=Gene;gene=tuf;gene_biotype=protein_coding;locus_tag=IY40_RS08995;old_locus_tag=IY40_09145 NZ_JPQY01000012.1 Protein Homology CDS 25611 26795 . - 0 ID=cds-WP_015376315.1;Parent=gene-IY40_RS08995;Dbxref=GenBank:WP_015376315.1;Name=WP_015376315.1;Ontology_term=GO:0006414,GO:0003746,GO:0005525;gbkey=CDS;gene=tuf;go_function=translation elongation factor activity|0003746||IEA,GTP binding|0005525||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012147227.1;locus_tag=IY40_RS08995;product=elongation factor Tu;protein_id=WP_015376315.1;transl_table=11 NZ_JPQY01000012.1 RefSeq gene 26866 28980 . - . ID=gene-IY40_RS09000;Name=fusA;gbkey=Gene;gene=fusA;gene_biotype=protein_coding;locus_tag=IY40_RS09000;old_locus_tag=IY40_09150 NZ_JPQY01000012.1 Protein Homology CDS 26866 28980 . - 0 ID=cds-WP_025304497.1;Parent=gene-IY40_RS09000;Dbxref=GenBank:WP_025304497.1;Name=WP_025304497.1;Ontology_term=GO:0006414,GO:0003746,GO:0005525;gbkey=CDS;gene=fusA;go_function=translation elongation factor activity|0003746||IEA,GTP binding|0005525||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020455498.1;locus_tag=IY40_RS09000;product=elongation factor G;protein_id=WP_025304497.1;transl_table=11 NZ_JPQY01000012.1 RefSeq gene 29074 29544 . - . ID=gene-IY40_RS09005;Name=rpsG;gbkey=Gene;gene=rpsG;gene_biotype=protein_coding;locus_tag=IY40_RS09005;old_locus_tag=IY40_09155 NZ_JPQY01000012.1 Protein Homology CDS 29074 29544 . - 0 ID=cds-WP_004956203.1;Parent=gene-IY40_RS09005;Dbxref=GenBank:WP_004956203.1;Name=WP_004956203.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsG;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001742319.1;locus_tag=IY40_RS09005;product=30S ribosomal protein S7;protein_id=WP_004956203.1;transl_table=11 NZ_JPQY01000012.1 RefSeq gene 29641 30015 . - . ID=gene-IY40_RS25200;Name=rpsL;gbkey=Gene;gene=rpsL;gene_biotype=protein_coding;locus_tag=IY40_RS25200 NZ_JPQY01000012.1 Protein Homology CDS 29641 30015 . - 0 ID=cds-WP_004930426.1;Parent=gene-IY40_RS25200;Dbxref=GenBank:WP_004930426.1;Name=WP_004930426.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsL;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003852912.1;locus_tag=IY40_RS25200;product=30S ribosomal protein S12;protein_id=WP_004930426.1;transl_table=11 NZ_JPQY01000012.1 RefSeq gene 30159 30446 . - . ID=gene-IY40_RS09015;Name=tusB;gbkey=Gene;gene=tusB;gene_biotype=protein_coding;locus_tag=IY40_RS09015;old_locus_tag=IY40_09165 NZ_JPQY01000012.1 Protein Homology CDS 30159 30446 . - 0 ID=cds-WP_025304499.1;Parent=gene-IY40_RS09015;Dbxref=GenBank:WP_025304499.1;Name=WP_025304499.1;Ontology_term=GO:0002143;gbkey=CDS;gene=tusB;go_process=tRNA wobble position uridine thiolation|0002143||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016930327.1;locus_tag=IY40_RS09015;product=sulfurtransferase complex subunit TusB;protein_id=WP_025304499.1;transl_table=11 NZ_JPQY01000012.1 RefSeq gene 30456 30815 . - . ID=gene-IY40_RS09020;Name=tusC;gbkey=Gene;gene=tusC;gene_biotype=protein_coding;locus_tag=IY40_RS09020;old_locus_tag=IY40_09170 NZ_JPQY01000012.1 Protein Homology CDS 30456 30815 . - 0 ID=cds-WP_043138837.1;Parent=gene-IY40_RS09020;Dbxref=GenBank:WP_043138837.1;Name=WP_043138837.1;gbkey=CDS;gene=tusC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004951206.1;locus_tag=IY40_RS09020;product=sulfurtransferase complex subunit TusC;protein_id=WP_043138837.1;transl_table=11 NZ_JPQY01000012.1 RefSeq gene 30823 31212 . - . ID=gene-IY40_RS09025;Name=tusD;gbkey=Gene;gene=tusD;gene_biotype=protein_coding;locus_tag=IY40_RS09025;old_locus_tag=IY40_09175 NZ_JPQY01000012.1 Protein Homology CDS 30823 31212 . - 0 ID=cds-WP_033636259.1;Parent=gene-IY40_RS09025;Dbxref=GenBank:WP_033636259.1;Name=WP_033636259.1;Ontology_term=GO:0008033,GO:0016783;gbkey=CDS;gene=tusD;go_function=sulfurtransferase activity|0016783||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015379269.1;locus_tag=IY40_RS09025;product=sulfurtransferase complex subunit TusD;protein_id=WP_033636259.1;transl_table=11 NZ_JPQY01000012.1 RefSeq gene 31212 31934 . - . ID=gene-IY40_RS09030;Name=IY40_RS09030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS09030;old_locus_tag=IY40_09180 NZ_JPQY01000012.1 Protein Homology CDS 31212 31934 . - 0 ID=cds-WP_004930418.1;Parent=gene-IY40_RS09030;Dbxref=GenBank:WP_004930418.1;Name=WP_004930418.1;Ontology_term=GO:0006355,GO:0007165,GO:0003677,GO:0003700,GO:0005515,GO:0140110;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,protein binding|0005515||IEA,transcription regulator activity|0140110||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012147233.1;locus_tag=IY40_RS09030;product=helix-turn-helix transcriptional regulator;protein_id=WP_004930418.1;transl_table=11 NZ_JPQY01000012.1 RefSeq gene 32308 33147 . - . ID=gene-IY40_RS09035;Name=fkpA;gbkey=Gene;gene=fkpA;gene_biotype=protein_coding;locus_tag=IY40_RS09035;old_locus_tag=IY40_09185 NZ_JPQY01000012.1 Protein Homology CDS 32308 33147 . - 0 ID=cds-WP_025304502.1;Parent=gene-IY40_RS09035;Dbxref=GenBank:WP_025304502.1;Name=WP_025304502.1;Ontology_term=GO:0006457,GO:0003755;gbkey=CDS;gene=fkpA;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019456123.1;locus_tag=IY40_RS09035;product=FKBP-type peptidyl-prolyl cis-trans isomerase;protein_id=WP_025304502.1;transl_table=11 NZ_JPQY01000012.1 RefSeq gene 33504 33731 . + . ID=gene-IY40_RS09040;Name=IY40_RS09040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS09040;old_locus_tag=IY40_09190 NZ_JPQY01000012.1 Protein Homology CDS 33504 33731 . + 0 ID=cds-WP_025304503.1;Parent=gene-IY40_RS09040;Dbxref=GenBank:WP_025304503.1;Name=WP_025304503.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012147235.1;locus_tag=IY40_RS09040;product=SlyX family protein;protein_id=WP_025304503.1;transl_table=11 NZ_JPQY01000012.1 RefSeq gene 33747 34919 . - . ID=gene-IY40_RS09045;Name=IY40_RS09045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS09045;old_locus_tag=IY40_09195 NZ_JPQY01000012.1 Protein Homology CDS 33747 34919 . - 0 ID=cds-WP_025304504.1;Parent=gene-IY40_RS09045;Dbxref=GenBank:WP_025304504.1;Name=WP_025304504.1;Ontology_term=GO:0009086,GO:0030170,GO:0047804;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA,cysteine-S-conjugate beta-lyase activity|0047804||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015379271.1;locus_tag=IY40_RS09045;product=MalY/PatB family protein;protein_id=WP_025304504.1;transl_table=11 NZ_JPQY01000012.1 RefSeq gene 34921 36360 . - . ID=gene-IY40_RS09050;Name=nhaC;gbkey=Gene;gene=nhaC;gene_biotype=protein_coding;locus_tag=IY40_RS09050;old_locus_tag=IY40_09200 NZ_JPQY01000012.1 Protein Homology CDS 34921 36360 . - 0 ID=cds-WP_043138849.1;Parent=gene-IY40_RS09050;Dbxref=GenBank:WP_043138849.1;Name=WP_043138849.1;Ontology_term=GO:0006814,GO:1902600,GO:0015297,GO:0015385,GO:0016020;gbkey=CDS;gene=nhaC;go_component=membrane|0016020||IEA;go_function=antiporter activity|0015297||IEA,sodium:proton antiporter activity|0015385||IEA;go_process=sodium ion transport|0006814||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019456126.1;locus_tag=IY40_RS09050;product=Na+/H+ antiporter NhaC;protein_id=WP_043138849.1;transl_table=11 NZ_JPQY01000012.1 RefSeq gene 36483 37511 . - . ID=gene-IY40_RS09055;Name=IY40_RS09055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS09055;old_locus_tag=IY40_09205 NZ_JPQY01000012.1 Protein Homology CDS 36483 37511 . - 0 ID=cds-WP_043138853.1;Parent=gene-IY40_RS09055;Dbxref=GenBank:WP_043138853.1;Name=WP_043138853.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016930333.1;locus_tag=IY40_RS09055;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_043138853.1;transl_table=11 NZ_JPQY01000012.1 RefSeq gene 37604 38191 . - . ID=gene-IY40_RS09060;Name=slyD;gbkey=Gene;gene=slyD;gene_biotype=protein_coding;locus_tag=IY40_RS09060;old_locus_tag=IY40_09210 NZ_JPQY01000012.1 Protein Homology CDS 37604 38191 . - 0 ID=cds-WP_004930407.1;Parent=gene-IY40_RS09060;Dbxref=GenBank:WP_004930407.1;Name=WP_004930407.1;Ontology_term=GO:0003755;gbkey=CDS;gene=slyD;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008457098.1;locus_tag=IY40_RS09060;product=peptidylprolyl isomerase;protein_id=WP_004930407.1;transl_table=11 NZ_JPQY01000012.1 RefSeq gene 38304 38507 . - . ID=gene-IY40_RS09065;Name=IY40_RS09065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS09065;old_locus_tag=IY40_09215 NZ_JPQY01000012.1 Protein Homology CDS 38304 38507 . - 0 ID=cds-WP_015379274.1;Parent=gene-IY40_RS09065;Dbxref=GenBank:WP_015379274.1;Name=WP_015379274.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012147237.1;locus_tag=IY40_RS09065;product=YheV family putative zinc ribbon protein;protein_id=WP_015379274.1;transl_table=11 NZ_JPQY01000012.1 RefSeq gene 38522 40330 . - . ID=gene-IY40_RS09070;Name=kefB;gbkey=Gene;gene=kefB;gene_biotype=protein_coding;locus_tag=IY40_RS09070;old_locus_tag=IY40_09220 NZ_JPQY01000012.1 Protein Homology CDS 38522 40330 . - 0 ID=cds-WP_043138857.1;Parent=gene-IY40_RS09070;Dbxref=GenBank:WP_043138857.1;Name=WP_043138857.1;Ontology_term=GO:0006813,GO:0015503;gbkey=CDS;gene=kefB;go_function=glutathione-regulated potassium exporter activity|0015503||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019456128.1;locus_tag=IY40_RS09070;product=glutathione-regulated potassium-efflux system protein KefB;protein_id=WP_043138857.1;transl_table=11 NZ_JPQY01000012.1 RefSeq gene 40333 40884 . - . ID=gene-IY40_RS09075;Name=kefG;gbkey=Gene;gene=kefG;gene_biotype=protein_coding;locus_tag=IY40_RS09075;old_locus_tag=IY40_09225 NZ_JPQY01000012.1 Protein Homology CDS 40333 40884 . - 0 ID=cds-WP_025159909.1;Parent=gene-IY40_RS09075;Dbxref=GenBank:WP_025159909.1;Name=WP_025159909.1;Ontology_term=GO:0006813;gbkey=CDS;gene=kefG;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012147239.1;locus_tag=IY40_RS09075;product=glutathione-regulated potassium-efflux system ancillary protein KefG;protein_id=WP_025159909.1;transl_table=11 NZ_JPQY01000012.1 RefSeq gene 41014 42927 . + . ID=gene-IY40_RS09080;Name=IY40_RS09080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS09080;old_locus_tag=IY40_09230 NZ_JPQY01000012.1 Protein Homology CDS 41014 42927 . + 0 ID=cds-WP_043138860.1;Parent=gene-IY40_RS09080;Dbxref=GenBank:WP_043138860.1;Name=WP_043138860.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015379276.1;locus_tag=IY40_RS09080;product=ABC transporter ATP-binding protein;protein_id=WP_043138860.1;transl_table=11 NZ_JPQY01000012.1 RefSeq gene 42931 43779 . - . ID=gene-IY40_RS09085;Name=tauD;gbkey=Gene;gene=tauD;gene_biotype=protein_coding;locus_tag=IY40_RS09085;old_locus_tag=IY40_09235 NZ_JPQY01000012.1 Protein Homology CDS 42931 43779 . - 0 ID=cds-WP_043138862.1;Parent=gene-IY40_RS09085;Dbxref=GenBank:WP_043138862.1;Name=WP_043138862.1;Ontology_term=GO:0016491;gbkey=CDS;gene=tauD;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019081513.1;locus_tag=IY40_RS09085;product=taurine dioxygenase;protein_id=WP_043138862.1;transl_table=11 NZ_JPQY01000012.1 RefSeq gene 43776 44612 . - . ID=gene-IY40_RS09090;Name=tauC;gbkey=Gene;gene=tauC;gene_biotype=protein_coding;locus_tag=IY40_RS09090;old_locus_tag=IY40_09240 NZ_JPQY01000012.1 Protein Homology CDS 43776 44612 . - 0 ID=cds-WP_033631937.1;Parent=gene-IY40_RS09090;Dbxref=GenBank:WP_033631937.1;Name=WP_033631937.1;Ontology_term=GO:0055085,GO:0015411,GO:0016020;gbkey=CDS;gene=tauC;go_component=membrane|0016020||IEA;go_function=ABC-type taurine transporter transporter activity|0015411||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004951236.1;locus_tag=IY40_RS09090;product=taurine ABC transporter permease TauC;protein_id=WP_033631937.1;transl_table=11 NZ_JPQY01000012.1 RefSeq gene 44609 45376 . - . ID=gene-IY40_RS09095;Name=tauB;gbkey=Gene;gene=tauB;gene_biotype=protein_coding;locus_tag=IY40_RS09095;old_locus_tag=IY40_09245 NZ_JPQY01000012.1 Protein Homology CDS 44609 45376 . - 0 ID=cds-WP_025304511.1;Parent=gene-IY40_RS09095;Dbxref=GenBank:WP_025304511.1;Name=WP_025304511.1;Ontology_term=GO:0005524,GO:0015411,GO:0016020;gbkey=CDS;gene=tauB;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type taurine transporter transporter activity|0015411||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005186200.1;locus_tag=IY40_RS09095;product=taurine ABC transporter ATP-binding subunit;protein_id=WP_025304511.1;transl_table=11 NZ_JPQY01000012.1 RefSeq gene 45386 46381 . - . ID=gene-IY40_RS09100;Name=tauA;gbkey=Gene;gene=tauA;gene_biotype=protein_coding;locus_tag=IY40_RS09100;old_locus_tag=IY40_09250 NZ_JPQY01000012.1 Protein Homology CDS 45386 46381 . - 0 ID=cds-WP_025304512.1;Parent=gene-IY40_RS09100;Dbxref=GenBank:WP_025304512.1;Name=WP_025304512.1;Ontology_term=GO:0055085,GO:0015411,GO:0042597,GO:0043190;gbkey=CDS;gene=tauA;go_component=periplasmic space|0042597||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ABC-type taurine transporter transporter activity|0015411||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013814806.1;locus_tag=IY40_RS09100;product=taurine ABC transporter substrate-binding protein;protein_id=WP_025304512.1;transl_table=11 NZ_JPQY01000012.1 RefSeq gene 46496 47278 . - . ID=gene-IY40_RS09105;Name=IY40_RS09105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS09105;old_locus_tag=IY40_09255 NZ_JPQY01000012.1 Protein Homology CDS 46496 47278 . - 0 ID=cds-WP_025304513.1;Parent=gene-IY40_RS09105;Dbxref=GenBank:WP_025304513.1;Name=WP_025304513.1;Ontology_term=GO:0009058,GO:0016853,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=isomerase activity|0016853||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019456135.1;locus_tag=IY40_RS09105;product=PhzF family phenazine biosynthesis protein;protein_id=WP_025304513.1;transl_table=11 NZ_JPQY01000012.1 RefSeq gene 47289 47891 . - . ID=gene-IY40_RS09110;Name=IY40_RS09110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS09110;old_locus_tag=IY40_09260 NZ_JPQY01000012.1 Protein Homology CDS 47289 47891 . - 0 ID=cds-WP_025304514.1;Parent=gene-IY40_RS09110;Dbxref=GenBank:WP_025304514.1;Name=WP_025304514.1;Ontology_term=GO:0006865,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004391456.1;locus_tag=IY40_RS09110;product=LysE family translocator;protein_id=WP_025304514.1;transl_table=11 NZ_JPQY01000012.1 RefSeq gene 48010 48990 . + . ID=gene-IY40_RS09115;Name=IY40_RS09115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS09115;old_locus_tag=IY40_09265 NZ_JPQY01000012.1 Protein Homology CDS 48010 48990 . + 0 ID=cds-WP_025304515.1;Parent=gene-IY40_RS09115;Dbxref=GenBank:WP_025304515.1;Name=WP_025304515.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016930342.1;locus_tag=IY40_RS09115;product=hydrolase;protein_id=WP_025304515.1;transl_table=11 NZ_JPQY01000012.1 RefSeq gene 48987 49220 . + . ID=gene-IY40_RS09120;Name=IY40_RS09120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS09120;old_locus_tag=IY40_09270 NZ_JPQY01000012.1 Protein Homology CDS 48987 49220 . + 0 ID=cds-WP_004930376.1;Parent=gene-IY40_RS09120;Dbxref=GenBank:WP_004930376.1;Name=WP_004930376.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004930376.1;locus_tag=IY40_RS09120;product=YheU family protein;protein_id=WP_004930376.1;transl_table=11 NZ_JPQY01000012.1 RefSeq gene 49372 50241 . + . ID=gene-IY40_RS09125;Name=IY40_RS09125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS09125;old_locus_tag=IY40_09275 NZ_JPQY01000012.1 Protein Homology CDS 49372 50241 . + 0 ID=cds-WP_025304516.1;Parent=gene-IY40_RS09125;Dbxref=GenBank:WP_025304516.1;Name=WP_025304516.1;Ontology_term=GO:0005975,GO:0005524,GO:0008974;gbkey=CDS;go_function=ATP binding|0005524||IEA,phosphoribulokinase activity|0008974||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015962172.1;locus_tag=IY40_RS09125;product=phosphoribulokinase;protein_id=WP_025304516.1;transl_table=11 NZ_JPQY01000012.1 RefSeq gene 50280 50687 . - . ID=gene-IY40_RS09130;Name=IY40_RS09130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS09130;old_locus_tag=IY40_09280 NZ_JPQY01000012.1 Protein Homology CDS 50280 50687 . - 0 ID=cds-WP_025304517.1;Parent=gene-IY40_RS09130;Dbxref=GenBank:WP_025304517.1;Name=WP_025304517.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004875129.1;locus_tag=IY40_RS09130;product=OsmC family protein;protein_id=WP_025304517.1;transl_table=11 NZ_JPQY01000012.1 RefSeq gene 51070 51702 . + . ID=gene-IY40_RS09135;Name=crp;gbkey=Gene;gene=crp;gene_biotype=protein_coding;locus_tag=IY40_RS09135;old_locus_tag=IY40_09285 NZ_JPQY01000012.1 Protein Homology CDS 51070 51702 . + 0 ID=cds-WP_004090925.1;Parent=gene-IY40_RS09135;Dbxref=GenBank:WP_004090925.1;Name=WP_004090925.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=crp;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016506431.1;locus_tag=IY40_RS09135;product=cAMP-activated global transcriptional regulator CRP;protein_id=WP_004090925.1;transl_table=11 NZ_JPQY01000012.1 RefSeq gene 51753 53831 . + . ID=gene-IY40_RS09140;Name=IY40_RS09140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS09140;old_locus_tag=IY40_09290 NZ_JPQY01000012.1 Protein Homology CDS 51753 53831 . + 0 ID=cds-WP_043138868.1;Parent=gene-IY40_RS09140;Dbxref=GenBank:WP_043138868.1;Name=WP_043138868.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006319028.1;locus_tag=IY40_RS09140;product=YccS/YhfK family putative transporter;protein_id=WP_043138868.1;transl_table=11 NZ_JPQY01000012.1 RefSeq gene 53872 55089 . - . ID=gene-IY40_RS09145;Name=argD;gbkey=Gene;gene=argD;gene_biotype=protein_coding;gene_synonym=dapC;locus_tag=IY40_RS09145;old_locus_tag=IY40_09295 NZ_JPQY01000012.1 Protein Homology CDS 53872 55089 . - 0 ID=cds-WP_025304519.1;Parent=gene-IY40_RS09145;Dbxref=GenBank:WP_025304519.1;Name=WP_025304519.1;gbkey=CDS;gene=argD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017894269.1;locus_tag=IY40_RS09145;product=bifunctional acetylornithine/succinyldiaminopimelate transaminase;protein_id=WP_025304519.1;transl_table=11 NZ_JPQY01000012.1 RefSeq gene 55221 55796 . - . ID=gene-IY40_RS09150;Name=IY40_RS09150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS09150;old_locus_tag=IY40_09300 NZ_JPQY01000012.1 Protein Homology CDS 55221 55796 . - 0 ID=cds-WP_025304520.1;Parent=gene-IY40_RS09150;Dbxref=GenBank:WP_025304520.1;Name=WP_025304520.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016930347.1;locus_tag=IY40_RS09150;product=aminodeoxychorismate synthase component II;protein_id=WP_025304520.1;transl_table=11 NZ_JPQY01000012.1 RefSeq gene 55869 57392 . - . ID=gene-IY40_RS09155;Name=IY40_RS09155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS09155;old_locus_tag=IY40_09305 NZ_JPQY01000012.1 Protein Homology CDS 55869 57392 . - 0 ID=cds-WP_043138869.1;Parent=gene-IY40_RS09155;Dbxref=GenBank:WP_043138869.1;Name=WP_043138869.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004930359.1;locus_tag=IY40_RS09155;product=helicase HerA-like domain-containing protein;protein_id=WP_043138869.1;transl_table=11 NZ_JPQY01000012.1 RefSeq gene 57544 58269 . - . ID=gene-IY40_RS09160;Name=btsR;gbkey=Gene;gene=btsR;gene_biotype=protein_coding;gene_synonym=yehT;locus_tag=IY40_RS09160;old_locus_tag=IY40_09310 NZ_JPQY01000012.1 Protein Homology CDS 57544 58269 . - 0 ID=cds-WP_025304522.1;Parent=gene-IY40_RS09160;Dbxref=GenBank:WP_025304522.1;Name=WP_025304522.1;gbkey=CDS;gene=btsR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012147264.1;locus_tag=IY40_RS09160;product=two-component system response regulator BtsR;protein_id=WP_025304522.1;transl_table=11 NZ_JPQY01000012.1 RefSeq gene 58269 59954 . - . ID=gene-IY40_RS09165;Name=IY40_RS09165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS09165;old_locus_tag=IY40_09315 NZ_JPQY01000012.1 Protein Homology CDS 58269 59954 . - 0 ID=cds-WP_043138870.1;Parent=gene-IY40_RS09165;Dbxref=GenBank:WP_043138870.1;Name=WP_043138870.1;Ontology_term=GO:0000160,GO:0071555,GO:0000155,GO:0004673,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012147265.1;locus_tag=IY40_RS09165;product=sensor histidine kinase;protein_id=WP_043138870.1;transl_table=11 NZ_JPQY01000012.1 RefSeq gene 60110 60679 . - . ID=gene-IY40_RS09170;Name=ppiA;gbkey=Gene;gene=ppiA;gene_biotype=protein_coding;gene_synonym=rotA;locus_tag=IY40_RS09170;old_locus_tag=IY40_09320 NZ_JPQY01000012.1 Protein Homology CDS 60110 60679 . - 0 ID=cds-WP_025304524.1;Parent=gene-IY40_RS09170;Dbxref=GenBank:WP_025304524.1;Name=WP_025304524.1;gbkey=CDS;gene=ppiA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004956296.1;locus_tag=IY40_RS09170;product=peptidylprolyl isomerase A;protein_id=WP_025304524.1;transl_table=11 NZ_JPQY01000012.1 RefSeq gene 61033 61371 . + . ID=gene-IY40_RS09175;Name=IY40_RS09175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS09175;old_locus_tag=IY40_09325 NZ_JPQY01000012.1 Protein Homology CDS 61033 61371 . + 0 ID=cds-WP_025304525.1;Parent=gene-IY40_RS09175;Dbxref=GenBank:WP_025304525.1;Name=WP_025304525.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004951271.1;locus_tag=IY40_RS09175;product=PTS lactose/cellobiose transporter subunit IIA;protein_id=WP_025304525.1;transl_table=11 NZ_JPQY01000012.1 RefSeq gene 61368 62675 . + . ID=gene-IY40_RS09180;Name=IY40_RS09180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS09180;old_locus_tag=IY40_09330 NZ_JPQY01000012.1 Protein Homology CDS 61368 62675 . + 0 ID=cds-WP_043138872.1;Parent=gene-IY40_RS09180;Dbxref=GenBank:WP_043138872.1;Name=WP_043138872.1;Ontology_term=GO:0005975,GO:0008706,GO:0046872;gbkey=CDS;go_function=6-phospho-beta-glucosidase activity|0008706||IEA,metal ion binding|0046872||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013814823.1;locus_tag=IY40_RS09180;product=6-phospho-beta-glucosidase;protein_id=WP_043138872.1;transl_table=11 NZ_JPQY01000012.1 RefSeq gene 62746 63726 . + . ID=gene-IY40_RS09185;Name=IY40_RS09185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS09185;old_locus_tag=IY40_09335 NZ_JPQY01000012.1 Protein Homology CDS 62746 63726 . + 0 ID=cds-WP_025304527.1;Parent=gene-IY40_RS09185;Dbxref=GenBank:WP_025304527.1;Name=WP_025304527.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016930354.1;locus_tag=IY40_RS09185;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_025304527.1;transl_table=11 NZ_JPQY01000012.1 RefSeq gene 63918 65102 . + . ID=gene-IY40_RS09190;Name=tsgA;gbkey=Gene;gene=tsgA;gene_biotype=protein_coding;locus_tag=IY40_RS09190;old_locus_tag=IY40_09340 NZ_JPQY01000012.1 Protein Homology CDS 63918 65102 . + 0 ID=cds-WP_025304528.1;Parent=gene-IY40_RS09190;Dbxref=GenBank:WP_025304528.1;Name=WP_025304528.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=tsgA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019084080.1;locus_tag=IY40_RS09190;product=MFS transporter TsgA;protein_id=WP_025304528.1;transl_table=11 NZ_JPQY01000012.1 RefSeq gene 65157 66425 . - . ID=gene-IY40_RS09195;Name=IY40_RS09195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS09195;old_locus_tag=IY40_09345 NZ_JPQY01000012.1 Protein Homology CDS 65157 66425 . - 0 ID=cds-WP_038629982.1;Parent=gene-IY40_RS09195;Dbxref=GenBank:WP_038629982.1;Name=WP_038629982.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004951293.1;locus_tag=IY40_RS09195;product=cytosine deaminase;protein_id=WP_038629982.1;transl_table=11 NZ_JPQY01000012.1 RefSeq gene 66729 69278 . + . ID=gene-IY40_RS09205;Name=nirB;gbkey=Gene;gene=nirB;gene_biotype=protein_coding;locus_tag=IY40_RS09205;old_locus_tag=IY40_09355 NZ_JPQY01000012.1 Protein Homology CDS 66729 69278 . + 0 ID=cds-WP_043138880.1;Parent=gene-IY40_RS09205;Dbxref=GenBank:WP_043138880.1;Name=WP_043138880.1;Ontology_term=GO:0042128,GO:0008942,GO:0050660,GO:0050661;gbkey=CDS;gene=nirB;go_function=nitrite reductase [NAD(P)H] activity|0008942||IEA,flavin adenine dinucleotide binding|0050660||IEA,NADP binding|0050661||IEA;go_process=nitrate assimilation|0042128||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015379292.1;locus_tag=IY40_RS09205;product=nitrite reductase large subunit NirB;protein_id=WP_043138880.1;transl_table=11 NZ_JPQY01000012.1 RefSeq gene 69275 69601 . + . ID=gene-IY40_RS09210;Name=nirD;gbkey=Gene;gene=nirD;gene_biotype=protein_coding;locus_tag=IY40_RS09210;old_locus_tag=IY40_09360 NZ_JPQY01000012.1 Protein Homology CDS 69275 69601 . + 0 ID=cds-WP_038878129.1;Parent=gene-IY40_RS09210;Dbxref=GenBank:WP_038878129.1;Name=WP_038878129.1;gbkey=CDS;gene=nirD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208887.1;locus_tag=IY40_RS09210;product=nitrite reductase small subunit NirD;protein_id=WP_038878129.1;transl_table=11 NZ_JPQY01000012.1 RefSeq gene 69618 70418 . + . ID=gene-IY40_RS09215;Name=nirC;gbkey=Gene;gene=nirC;gene_biotype=protein_coding;locus_tag=IY40_RS09215;old_locus_tag=IY40_09365 NZ_JPQY01000012.1 Protein Homology CDS 69618 70418 . + 0 ID=cds-WP_043138885.1;Parent=gene-IY40_RS09215;Dbxref=GenBank:WP_043138885.1;Name=WP_043138885.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=nirC;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004930327.1;locus_tag=IY40_RS09215;product=nitrite transporter NirC;protein_id=WP_043138885.1;transl_table=11 NZ_JPQY01000012.1 RefSeq gene 70470 71873 . + . ID=gene-IY40_RS09220;Name=cysG;gbkey=Gene;gene=cysG;gene_biotype=protein_coding;locus_tag=IY40_RS09220;old_locus_tag=IY40_09370 NZ_JPQY01000012.1 Protein Homology CDS 70470 71873 . + 0 ID=cds-WP_043138888.1;Parent=gene-IY40_RS09220;Dbxref=GenBank:WP_043138888.1;Name=WP_043138888.1;Ontology_term=GO:0019354,GO:0004851,GO:0043115,GO:0051266,GO:0051287;gbkey=CDS;gene=cysG;go_function=uroporphyrin-III C-methyltransferase activity|0004851||IEA,precorrin-2 dehydrogenase activity|0043115||IEA,sirohydrochlorin ferrochelatase activity|0051266||IEA,NAD binding|0051287||IEA;go_process=siroheme biosynthetic process|0019354||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016930363.1;locus_tag=IY40_RS09220;product=siroheme synthase CysG;protein_id=WP_043138888.1;transl_table=11 NZ_JPQY01000012.1 RefSeq gene 71925 72932 . - . ID=gene-IY40_RS09225;Name=trpS;gbkey=Gene;gene=trpS;gene_biotype=protein_coding;locus_tag=IY40_RS09225;old_locus_tag=IY40_09375 NZ_JPQY01000012.1 Protein Homology CDS 71925 72932 . - 0 ID=cds-WP_043138891.1;Parent=gene-IY40_RS09225;Dbxref=GenBank:WP_043138891.1;Name=WP_043138891.1;Ontology_term=GO:0006436,GO:0000166,GO:0004830,GO:0005524;gbkey=CDS;gene=trpS;go_function=nucleotide binding|0000166||IEA,tryptophan-tRNA ligase activity|0004830||IEA,ATP binding|0005524||IEA;go_process=tryptophanyl-tRNA aminoacylation|0006436||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004930324.1;locus_tag=IY40_RS09225;product=tryptophan--tRNA ligase;protein_id=WP_043138891.1;transl_table=11 NZ_JPQY01000012.1 RefSeq gene 72935 73633 . - . ID=gene-IY40_RS09230;Name=IY40_RS09230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS09230;old_locus_tag=IY40_09380 NZ_JPQY01000012.1 Protein Homology CDS 72935 73633 . - 0 ID=cds-WP_043138894.1;Parent=gene-IY40_RS09230;Dbxref=GenBank:WP_043138894.1;Name=WP_043138894.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004951303.1;locus_tag=IY40_RS09230;product=phosphoglycolate phosphatase;protein_id=WP_043138894.1;transl_table=11 NZ_JPQY01000012.1 RefSeq gene 73626 74303 . - . ID=gene-IY40_RS09235;Name=rpe;gbkey=Gene;gene=rpe;gene_biotype=protein_coding;locus_tag=IY40_RS09235;old_locus_tag=IY40_09385 NZ_JPQY01000012.1 Protein Homology CDS 73626 74303 . - 0 ID=cds-WP_004930320.1;Parent=gene-IY40_RS09235;Dbxref=GenBank:WP_004930320.1;Name=WP_004930320.1;Ontology_term=GO:0006098,GO:0004750;gbkey=CDS;gene=rpe;go_function=D-ribulose-phosphate 3-epimerase activity|0004750||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012147278.1;locus_tag=IY40_RS09235;product=ribulose-phosphate 3-epimerase;protein_id=WP_004930320.1;transl_table=11 NZ_JPQY01000012.1 RefSeq gene 74354 75166 . - . ID=gene-IY40_RS09240;Name=dam;gbkey=Gene;gene=dam;gene_biotype=protein_coding;locus_tag=IY40_RS09240;old_locus_tag=IY40_09390 NZ_JPQY01000012.1 Protein Homology CDS 74354 75166 . - 0 ID=cds-WP_025304536.1;Parent=gene-IY40_RS09240;Dbxref=GenBank:WP_025304536.1;Name=WP_025304536.1;Ontology_term=GO:0003676,GO:0009007;gbkey=CDS;gene=dam;go_function=nucleic acid binding|0003676||IEA,site-specific DNA-methyltransferase (adenine-specific) activity|0009007||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015962195.1;locus_tag=IY40_RS09240;product=adenine-specific DNA-methyltransferase;protein_id=WP_025304536.1;transl_table=11 NZ_JPQY01000012.1 RefSeq gene 75251 76264 . - . ID=gene-IY40_RS09245;Name=IY40_RS09245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS09245;old_locus_tag=IY40_09395 NZ_JPQY01000012.1 Protein Homology CDS 75251 76264 . - 0 ID=cds-WP_043138896.1;Parent=gene-IY40_RS09245;Dbxref=GenBank:WP_043138896.1;Name=WP_043138896.1;Ontology_term=GO:0042834,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004930316.1;locus_tag=IY40_RS09245;product=SPOR domain-containing protein;protein_id=WP_043138896.1;transl_table=11 NZ_JPQY01000012.1 RefSeq gene 76421 77521 . - . ID=gene-IY40_RS09250;Name=aroB;gbkey=Gene;gene=aroB;gene_biotype=protein_coding;locus_tag=IY40_RS09250;old_locus_tag=IY40_09400 NZ_JPQY01000012.1 Protein Homology CDS 76421 77521 . - 0 ID=cds-WP_043138898.1;Parent=gene-IY40_RS09250;Dbxref=GenBank:WP_043138898.1;Name=WP_043138898.1;Ontology_term=GO:0009073,GO:0009423,GO:0003856,GO:0005737;gbkey=CDS;gene=aroB;go_component=cytoplasm|0005737||IEA;go_function=3-dehydroquinate synthase activity|0003856||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA,chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015379297.1;locus_tag=IY40_RS09250;product=3-dehydroquinate synthase;protein_id=WP_043138898.1;transl_table=11 NZ_JPQY01000012.1 RefSeq gene 77628 78149 . - . ID=gene-IY40_RS09255;Name=aroK;gbkey=Gene;gene=aroK;gene_biotype=protein_coding;locus_tag=IY40_RS09255;old_locus_tag=IY40_09405 NZ_JPQY01000012.1 Protein Homology CDS 77628 78149 . - 0 ID=cds-WP_004391482.1;Parent=gene-IY40_RS09255;Dbxref=GenBank:WP_004391482.1;Name=WP_004391482.1;gbkey=CDS;gene=aroK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004709337.1;locus_tag=IY40_RS09255;product=shikimate kinase AroK;protein_id=WP_004391482.1;transl_table=11 NZ_JPQY01000012.1 RefSeq gene 78499 79743 . - . ID=gene-IY40_RS09260;Name=hofQ;gbkey=Gene;gene=hofQ;gene_biotype=protein_coding;locus_tag=IY40_RS09260;old_locus_tag=IY40_09410 NZ_JPQY01000012.1 Protein Homology CDS 78499 79743 . - 0 ID=cds-WP_080287124.1;Parent=gene-IY40_RS09260;Dbxref=GenBank:WP_080287124.1;Name=WP_080287124.1;gbkey=CDS;gene=hofQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017894283.1;locus_tag=IY40_RS09260;product=DNA uptake porin HofQ;protein_id=WP_080287124.1;transl_table=11 NZ_JPQY01000012.1 RefSeq gene 79740 80102 . - . ID=gene-IY40_RS09265;Name=IY40_RS09265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS09265;old_locus_tag=IY40_09415 NZ_JPQY01000012.1 Protein Homology CDS 79740 80102 . - 0 ID=cds-WP_025304540.1;Parent=gene-IY40_RS09265;Dbxref=GenBank:WP_025304540.1;Name=WP_025304540.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015379299.1;locus_tag=IY40_RS09265;product=HofP DNA utilization family protein;protein_id=WP_025304540.1;transl_table=11 NZ_JPQY01000012.1 RefSeq gene 80095 80589 . - . ID=gene-IY40_RS09270;Name=IY40_RS09270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS09270;old_locus_tag=IY40_09420 NZ_JPQY01000012.1 Protein Homology CDS 80095 80589 . - 0 ID=cds-WP_043138902.1;Parent=gene-IY40_RS09270;Dbxref=GenBank:WP_043138902.1;Name=WP_043138902.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015379300.1;locus_tag=IY40_RS09270;product=hypothetical protein;protein_id=WP_043138902.1;transl_table=11 NZ_JPQY01000012.1 RefSeq gene 80582 81121 . - . ID=gene-IY40_RS09275;Name=IY40_RS09275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS09275;old_locus_tag=IY40_09425 NZ_JPQY01000012.1 Protein Homology CDS 80582 81121 . - 0 ID=cds-WP_043138905.1;Parent=gene-IY40_RS09275;Dbxref=GenBank:WP_043138905.1;Name=WP_043138905.1;Ontology_term=GO:0043107,GO:0043683;gbkey=CDS;go_process=type IV pilus-dependent motility|0043107||IEA,type IV pilus assembly|0043683||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004930306.1;locus_tag=IY40_RS09275;product=PilN domain-containing protein;protein_id=WP_043138905.1;transl_table=11 NZ_JPQY01000012.1 RefSeq gene 81121 81954 . - . ID=gene-IY40_RS09280;Name=pilM;gbkey=Gene;gene=pilM;gene_biotype=protein_coding;locus_tag=IY40_RS09280;old_locus_tag=IY40_09430 NZ_JPQY01000012.1 Protein Homology CDS 81121 81954 . - 0 ID=cds-WP_043138911.1;Parent=gene-IY40_RS09280;Dbxref=GenBank:WP_043138911.1;Name=WP_043138911.1;gbkey=CDS;gene=pilM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015379302.1;locus_tag=IY40_RS09280;product=pilus assembly protein PilM;protein_id=WP_043138911.1;transl_table=11 NZ_JPQY01000012.1 RefSeq gene 82076 84634 . + . ID=gene-IY40_RS09285;Name=mrcA;gbkey=Gene;gene=mrcA;gene_biotype=protein_coding;locus_tag=IY40_RS09285;old_locus_tag=IY40_09435 NZ_JPQY01000012.1 Protein Homology CDS 82076 84634 . + 0 ID=cds-WP_025304544.1;Parent=gene-IY40_RS09285;Dbxref=GenBank:WP_025304544.1;Name=WP_025304544.1;Ontology_term=GO:0008658;gbkey=CDS;gene=mrcA;go_function=penicillin binding|0008658||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121637.1;locus_tag=IY40_RS09285;product=peptidoglycan glycosyltransferase/peptidoglycan DD-transpeptidase MrcA;protein_id=WP_025304544.1;transl_table=11 NZ_JPQY01000012.1 RefSeq gene 84686 85240 . - . ID=gene-IY40_RS09290;Name=nudE;gbkey=Gene;gene=nudE;gene_biotype=protein_coding;locus_tag=IY40_RS09290;old_locus_tag=IY40_09440 NZ_JPQY01000012.1 Protein Homology CDS 84686 85240 . - 0 ID=cds-WP_015379304.1;Parent=gene-IY40_RS09290;Dbxref=GenBank:WP_015379304.1;Name=WP_015379304.1;Ontology_term=GO:0016787;gbkey=CDS;gene=nudE;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006319109.1;locus_tag=IY40_RS09290;product=ADP compounds hydrolase NudE;protein_id=WP_015379304.1;transl_table=11 NZ_JPQY01000012.1 RefSeq gene 85686 87821 . + . ID=gene-IY40_RS09295;Name=IY40_RS09295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS09295;old_locus_tag=IY40_09445 NZ_JPQY01000012.1 Protein Homology CDS 85686 87821 . + 0 ID=cds-WP_025304545.1;Parent=gene-IY40_RS09295;Dbxref=GenBank:WP_025304545.1;Name=WP_025304545.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006319110.1;locus_tag=IY40_RS09295;product=intracellular growth attenuator family protein;protein_id=WP_025304545.1;transl_table=11 NZ_JPQY01000012.1 RefSeq gene 87921 88601 . + . ID=gene-IY40_RS09300;Name=yrfG;gbkey=Gene;gene=yrfG;gene_biotype=protein_coding;locus_tag=IY40_RS09300;old_locus_tag=IY40_09450 NZ_JPQY01000012.1 Protein Homology CDS 87921 88601 . + 0 ID=cds-WP_025304546.1;Parent=gene-IY40_RS09300;Dbxref=GenBank:WP_025304546.1;Name=WP_025304546.1;gbkey=CDS;gene=yrfG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019456170.1;locus_tag=IY40_RS09300;product=GMP/IMP nucleotidase;protein_id=WP_025304546.1;transl_table=11 NZ_JPQY01000012.1 RefSeq gene 88598 89005 . + . ID=gene-IY40_RS09305;Name=hslR;gbkey=Gene;gene=hslR;gene_biotype=protein_coding;locus_tag=IY40_RS09305;old_locus_tag=IY40_09455 NZ_JPQY01000012.1 Protein Homology CDS 88598 89005 . + 0 ID=cds-WP_025304547.1;Parent=gene-IY40_RS09305;Dbxref=GenBank:WP_025304547.1;Name=WP_025304547.1;gbkey=CDS;gene=hslR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005159667.1;locus_tag=IY40_RS09305;product=ribosome-associated heat shock protein Hsp15;protein_id=WP_025304547.1;transl_table=11 NZ_JPQY01000012.1 RefSeq gene 89031 89909 . + . ID=gene-IY40_RS09310;Name=hslO;gbkey=Gene;gene=hslO;gene_biotype=protein_coding;locus_tag=IY40_RS09310;old_locus_tag=IY40_09460 NZ_JPQY01000012.1 Protein Homology CDS 89031 89909 . + 0 ID=cds-WP_043138916.1;Parent=gene-IY40_RS09310;Dbxref=GenBank:WP_043138916.1;Name=WP_043138916.1;Ontology_term=GO:0006457,GO:0051082;gbkey=CDS;gene=hslO;go_function=unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012303382.1;locus_tag=IY40_RS09310;product=Hsp33 family molecular chaperone HslO;protein_id=WP_043138916.1;transl_table=11 NZ_JPQY01000012.1 RefSeq gene 90104 91723 . + . ID=gene-IY40_RS09315;Name=pckA;gbkey=Gene;gene=pckA;gene_biotype=protein_coding;locus_tag=IY40_RS09315;old_locus_tag=IY40_09465 NZ_JPQY01000012.1 Protein Homology CDS 90104 91723 . + 0 ID=cds-WP_043138920.1;Parent=gene-IY40_RS09315;Dbxref=GenBank:WP_043138920.1;Name=WP_043138920.1;Ontology_term=GO:0006094,GO:0004612;gbkey=CDS;gene=pckA;go_function=phosphoenolpyruvate carboxykinase (ATP) activity|0004612||IEA;go_process=gluconeogenesis|0006094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002394031.1;locus_tag=IY40_RS09315;product=phosphoenolpyruvate carboxykinase (ATP);protein_id=WP_043138920.1;transl_table=11 NZ_JPQY01000012.1 RefSeq gene 91850 92113 . + . ID=gene-IY40_RS09320;Name=IY40_RS09320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS09320;old_locus_tag=IY40_09470 NZ_JPQY01000012.1 Protein Homology CDS 91850 92113 . + 0 ID=cds-WP_004930730.1;Parent=gene-IY40_RS09320;Dbxref=GenBank:WP_004930730.1;Name=WP_004930730.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004930730.1;locus_tag=IY40_RS09320;product=FitA-like ribbon-helix-helix domain-containing protein;protein_id=WP_004930730.1;transl_table=11 NZ_JPQY01000012.1 RefSeq gene 92110 92589 . + . ID=gene-IY40_RS09325;Name=IY40_RS09325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS09325;old_locus_tag=IY40_09475 NZ_JPQY01000012.1 Protein Homology CDS 92110 92589 . + 0 ID=cds-WP_016930378.1;Parent=gene-IY40_RS09325;Dbxref=GenBank:WP_016930378.1;Name=WP_016930378.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016930378.1;locus_tag=IY40_RS09325;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_016930378.1;transl_table=11 NZ_JPQY01000012.1 RefSeq gene 92622 93992 . - . ID=gene-IY40_RS09330;Name=envZ;gbkey=Gene;gene=envZ;gene_biotype=protein_coding;locus_tag=IY40_RS09330;old_locus_tag=IY40_09480 NZ_JPQY01000012.1 Protein Homology CDS 92622 93992 . - 0 ID=cds-WP_015379311.1;Parent=gene-IY40_RS09330;Dbxref=GenBank:WP_015379311.1;Name=WP_015379311.1;Ontology_term=GO:0007165,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=envZ;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004951358.1;locus_tag=IY40_RS09330;product=two-component system sensor histidine kinase EnvZ;protein_id=WP_015379311.1;transl_table=11 NZ_JPQY01000012.1 RefSeq gene 93989 94708 . - . ID=gene-IY40_RS09335;Name=ompR;gbkey=Gene;gene=ompR;gene_biotype=protein_coding;locus_tag=IY40_RS09335;old_locus_tag=IY40_09485 NZ_JPQY01000012.1 Protein Homology CDS 93989 94708 . - 0 ID=cds-WP_004709363.1;Parent=gene-IY40_RS09335;Dbxref=GenBank:WP_004709363.1;Name=WP_004709363.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=ompR;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007374840.1;locus_tag=IY40_RS09335;product=osmolarity response regulator transcription factor OmpR;protein_id=WP_004709363.1;transl_table=11 NZ_JPQY01000012.1 RefSeq gene 94966 95271 . - . ID=gene-IY40_RS09340;Name=IY40_RS09340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS09340;old_locus_tag=IY40_09490 NZ_JPQY01000012.1 Protein Homology CDS 94966 95271 . - 0 ID=cds-WP_004930739.1;Parent=gene-IY40_RS09340;Dbxref=GenBank:WP_004930739.1;Name=WP_004930739.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004930739.1;locus_tag=IY40_RS09340;product=chaperone modulator CbpM;protein_id=WP_004930739.1;transl_table=11 NZ_JPQY01000012.1 RefSeq gene 95277 96233 . - . ID=gene-IY40_RS09345;Name=cbpA;gbkey=Gene;gene=cbpA;gene_biotype=protein_coding;locus_tag=IY40_RS09345;old_locus_tag=IY40_09495 NZ_JPQY01000012.1 Protein Homology CDS 95277 96233 . - 0 ID=cds-WP_043138927.1;Parent=gene-IY40_RS09345;Dbxref=GenBank:WP_043138927.1;Name=WP_043138927.1;Ontology_term=GO:0006457,GO:0051082;gbkey=CDS;gene=cbpA;go_function=unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011817008.1;locus_tag=IY40_RS09345;product=curved DNA-binding protein;protein_id=WP_043138927.1;transl_table=11 NZ_JPQY01000012.1 RefSeq gene 96463 96936 . + . ID=gene-IY40_RS09350;Name=greB;gbkey=Gene;gene=greB;gene_biotype=protein_coding;locus_tag=IY40_RS09350;old_locus_tag=IY40_09500 NZ_JPQY01000012.1 Protein Homology CDS 96463 96936 . + 0 ID=cds-WP_025304551.1;Parent=gene-IY40_RS09350;Dbxref=GenBank:WP_025304551.1;Name=WP_025304551.1;Ontology_term=GO:0032784,GO:0003677;gbkey=CDS;gene=greB;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015703675.1;locus_tag=IY40_RS09350;product=transcription elongation factor GreB;protein_id=WP_025304551.1;transl_table=11 NZ_JPQY01000012.1 RefSeq gene 97094 99427 . + . ID=gene-IY40_RS09355;Name=IY40_RS09355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS09355;old_locus_tag=IY40_09505 NZ_JPQY01000012.1 Protein Homology CDS 97094 99427 . + 0 ID=cds-WP_043138931.1;Parent=gene-IY40_RS09355;Dbxref=GenBank:WP_043138931.1;Name=WP_043138931.1;Ontology_term=GO:0003676,GO:0003729,GO:0005829;gbkey=CDS;go_component=cytosol|0005829||IEA;go_function=nucleic acid binding|0003676||IEA,mRNA binding|0003729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004930748.1;locus_tag=IY40_RS09355;product=Tex family protein;protein_id=WP_043138931.1;transl_table=11 NZ_JPQY01000012.1 RefSeq gene 100034 100258 . + . ID=gene-IY40_RS09360;Name=feoA;gbkey=Gene;gene=feoA;gene_biotype=protein_coding;locus_tag=IY40_RS09360;old_locus_tag=IY40_09510 NZ_JPQY01000012.1 Protein Homology CDS 100034 100258 . + 0 ID=cds-WP_043139125.1;Parent=gene-IY40_RS09360;Dbxref=GenBank:WP_043139125.1;Name=WP_043139125.1;gbkey=CDS;gene=feoA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005186094.1;locus_tag=IY40_RS09360;product=ferrous iron transporter A;protein_id=WP_043139125.1;transl_table=11 NZ_JPQY01000012.1 RefSeq gene 100321 102636 . + . ID=gene-IY40_RS09365;Name=feoB;gbkey=Gene;gene=feoB;gene_biotype=protein_coding;locus_tag=IY40_RS09365;old_locus_tag=IY40_09515 NZ_JPQY01000012.1 Protein Homology CDS 100321 102636 . + 0 ID=cds-WP_043138936.1;Parent=gene-IY40_RS09365;Dbxref=GenBank:WP_043138936.1;Name=WP_043138936.1;Ontology_term=GO:0006826,GO:0005525,GO:0015093,GO:0016020;gbkey=CDS;gene=feoB;go_component=membrane|0016020||IEA;go_function=GTP binding|0005525||IEA,ferrous iron transmembrane transporter activity|0015093||IEA;go_process=iron ion transport|0006826||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011906130.1;locus_tag=IY40_RS09365;product=Fe(2+) transporter permease subunit FeoB;protein_id=WP_043138936.1;transl_table=11 NZ_JPQY01000012.1 RefSeq gene 102636 102875 . + . ID=gene-IY40_RS09370;Name=IY40_RS09370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS09370;old_locus_tag=IY40_09520 NZ_JPQY01000012.1 Protein Homology CDS 102636 102875 . + 0 ID=cds-WP_025304555.1;Parent=gene-IY40_RS09370;Dbxref=GenBank:WP_025304555.1;Name=WP_025304555.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015379315.1;locus_tag=IY40_RS09370;product=FeoC-like transcriptional regulator;protein_id=WP_025304555.1;transl_table=11 NZ_JPQY01000012.1 RefSeq gene 102917 103201 . - . ID=gene-IY40_RS09375;Name=IY40_RS09375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS09375;old_locus_tag=IY40_09525 NZ_JPQY01000012.1 Protein Homology CDS 102917 103201 . - 0 ID=cds-WP_004930765.1;Parent=gene-IY40_RS09375;Dbxref=GenBank:WP_004930765.1;Name=WP_004930765.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004930765.1;locus_tag=IY40_RS09375;product=YdgH/BhsA/McbA-like domain containing protein;protein_id=WP_004930765.1;transl_table=11 NZ_JPQY01000012.1 RefSeq gene 103472 104242 . - . ID=gene-IY40_RS09380;Name=bioH;gbkey=Gene;gene=bioH;gene_biotype=protein_coding;locus_tag=IY40_RS09380;old_locus_tag=IY40_09530 NZ_JPQY01000012.1 Protein Homology CDS 103472 104242 . - 0 ID=cds-WP_025304556.1;Parent=gene-IY40_RS09380;Dbxref=GenBank:WP_025304556.1;Name=WP_025304556.1;Ontology_term=GO:0009102,GO:0052689;gbkey=CDS;gene=bioH;go_function=carboxylic ester hydrolase activity|0052689||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004930771.1;locus_tag=IY40_RS09380;product=pimeloyl-ACP methyl ester esterase BioH;protein_id=WP_025304556.1;transl_table=11 NZ_JPQY01000012.1 RefSeq gene 104283 104966 . + . ID=gene-IY40_RS09385;Name=gntX;gbkey=Gene;gene=gntX;gene_biotype=protein_coding;locus_tag=IY40_RS09385;old_locus_tag=IY40_09535 NZ_JPQY01000012.1 Protein Homology CDS 104283 104966 . + 0 ID=cds-WP_043138943.1;Parent=gene-IY40_RS09385;Dbxref=GenBank:WP_043138943.1;Name=WP_043138943.1;Ontology_term=GO:0009116;gbkey=CDS;gene=gntX;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017894304.1;locus_tag=IY40_RS09385;product=DNA utilization protein GntX;protein_id=WP_043138943.1;transl_table=11 NZ_JPQY01000012.1 RefSeq gene 105025 105600 . + . ID=gene-IY40_RS09390;Name=nfuA;gbkey=Gene;gene=nfuA;gene_biotype=protein_coding;locus_tag=IY40_RS09390;old_locus_tag=IY40_09540 NZ_JPQY01000012.1 Protein Homology CDS 105025 105600 . + 0 ID=cds-WP_025304558.1;Parent=gene-IY40_RS09390;Dbxref=GenBank:WP_025304558.1;Name=WP_025304558.1;Ontology_term=GO:0016226,GO:0051604,GO:0051539;gbkey=CDS;gene=nfuA;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA,protein maturation|0051604||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016942932.1;locus_tag=IY40_RS09390;product=Fe-S biogenesis protein NfuA;protein_id=WP_025304558.1;transl_table=11 NZ_JPQY01000012.1 RefSeq gene 105785 107875 . - . ID=gene-IY40_RS09395;Name=malQ;gbkey=Gene;gene=malQ;gene_biotype=protein_coding;locus_tag=IY40_RS09395;old_locus_tag=IY40_09545 NZ_JPQY01000012.1 Protein Homology CDS 105785 107875 . - 0 ID=cds-WP_043138948.1;Parent=gene-IY40_RS09395;Dbxref=GenBank:WP_043138948.1;Name=WP_043138948.1;Ontology_term=GO:0005975,GO:0004134;gbkey=CDS;gene=malQ;go_function=4-alpha-glucanotransferase activity|0004134||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208925.1;locus_tag=IY40_RS09395;product=4-alpha-glucanotransferase;protein_id=WP_043138948.1;transl_table=11 NZ_JPQY01000012.1 RefSeq gene 107885 110290 . - . ID=gene-IY40_RS09400;Name=malP;gbkey=Gene;gene=malP;gene_biotype=protein_coding;locus_tag=IY40_RS09400;old_locus_tag=IY40_09550 NZ_JPQY01000012.1 Protein Homology CDS 107885 110290 . - 0 ID=cds-WP_043138952.1;Parent=gene-IY40_RS09400;Dbxref=GenBank:WP_043138952.1;Name=WP_043138952.1;Ontology_term=GO:0005975,GO:0008184,GO:0030170;gbkey=CDS;gene=malP;go_function=glycogen phosphorylase activity|0008184||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012147311.1;locus_tag=IY40_RS09400;product=maltodextrin phosphorylase;protein_id=WP_043138952.1;transl_table=11 NZ_JPQY01000012.1 RefSeq gene 110751 113465 . + . ID=gene-IY40_RS09405;Name=malT;gbkey=Gene;gene=malT;gene_biotype=protein_coding;locus_tag=IY40_RS09405;old_locus_tag=IY40_09555 NZ_JPQY01000012.1 Protein Homology CDS 110751 113465 . + 0 ID=cds-WP_043138955.1;Parent=gene-IY40_RS09405;Dbxref=GenBank:WP_043138955.1;Name=WP_043138955.1;Ontology_term=GO:0006355,GO:0003677,GO:0005515;gbkey=CDS;gene=malT;go_function=DNA binding|0003677||IEA,protein binding|0005515||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006319140.1;locus_tag=IY40_RS09405;product=HTH-type transcriptional regulator MalT;protein_id=WP_043138955.1;transl_table=11 NZ_JPQY01000012.1 RefSeq gene 113548 113874 . + . ID=gene-IY40_RS09410;Name=glpE;gbkey=Gene;gene=glpE;gene_biotype=protein_coding;locus_tag=IY40_RS09410;old_locus_tag=IY40_09560 NZ_JPQY01000012.1 Protein Homology CDS 113548 113874 . + 0 ID=cds-WP_004930790.1;Parent=gene-IY40_RS09410;Dbxref=GenBank:WP_004930790.1;Name=WP_004930790.1;Ontology_term=GO:0004792;gbkey=CDS;gene=glpE;go_function=thiosulfate-cyanide sulfurtransferase activity|0004792||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006709018.1;locus_tag=IY40_RS09410;product=thiosulfate sulfurtransferase GlpE;protein_id=WP_004930790.1;transl_table=11 NZ_JPQY01000012.1 RefSeq gene 114046 114882 . + . ID=gene-IY40_RS09415;Name=glpG;gbkey=Gene;gene=glpG;gene_biotype=protein_coding;locus_tag=IY40_RS09415;old_locus_tag=IY40_09565 NZ_JPQY01000012.1 Protein Homology CDS 114046 114882 . + 0 ID=cds-WP_043138958.1;Parent=gene-IY40_RS09415;Dbxref=GenBank:WP_043138958.1;Name=WP_043138958.1;Ontology_term=GO:0006508,GO:0004252,GO:0016020;gbkey=CDS;gene=glpG;go_component=membrane|0016020||IEA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016261743.1;locus_tag=IY40_RS09415;product=rhomboid family intramembrane serine protease GlpG;protein_id=WP_043138958.1;transl_table=11 NZ_JPQY01000012.1 RefSeq gene 114933 115691 . + . ID=gene-IY40_RS09420;Name=IY40_RS09420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS09420;old_locus_tag=IY40_09570 NZ_JPQY01000012.1 Protein Homology CDS 114933 115691 . + 0 ID=cds-WP_004930797.1;Parent=gene-IY40_RS09420;Dbxref=GenBank:WP_004930797.1;Name=WP_004930797.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009635717.1;locus_tag=IY40_RS09420;product=DeoR/GlpR family transcriptional regulator;protein_id=WP_004930797.1;transl_table=11 NZ_JPQY01000012.1 RefSeq gene 115938 117446 . + . ID=gene-IY40_RS09425;Name=glpD;gbkey=Gene;gene=glpD;gene_biotype=protein_coding;locus_tag=IY40_RS09425;old_locus_tag=IY40_09575 NZ_JPQY01000012.1 Protein Homology CDS 115938 117446 . + 0 ID=cds-WP_043138961.1;Parent=gene-IY40_RS09425;Dbxref=GenBank:WP_043138961.1;Name=WP_043138961.1;Ontology_term=GO:0006072,GO:0004368,GO:0009331;gbkey=CDS;gene=glpD;go_component=glycerol-3-phosphate dehydrogenase (FAD) complex|0009331||IEA;go_function=glycerol-3-phosphate dehydrogenase (quinone) activity|0004368||IEA;go_process=glycerol-3-phosphate metabolic process|0006072||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004699669.1;locus_tag=IY40_RS09425;product=glycerol-3-phosphate dehydrogenase;protein_id=WP_043138961.1;transl_table=11 NZ_JPQY01000012.1 RefSeq gene 117506 119953 . - . ID=gene-IY40_RS09430;Name=glgP;gbkey=Gene;gene=glgP;gene_biotype=protein_coding;locus_tag=IY40_RS09430;old_locus_tag=IY40_09580 NZ_JPQY01000012.1 Protein Homology CDS 117506 119953 . - 0 ID=cds-WP_025304564.1;Parent=gene-IY40_RS09430;Dbxref=GenBank:WP_025304564.1;Name=WP_025304564.1;Ontology_term=GO:0005975,GO:0008184;gbkey=CDS;gene=glgP;go_function=glycogen phosphorylase activity|0008184||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013060332.1;locus_tag=IY40_RS09430;product=glycogen phosphorylase;protein_id=WP_025304564.1;transl_table=11 NZ_JPQY01000012.1 RefSeq gene 120095 121525 . - . ID=gene-IY40_RS09435;Name=glgA;gbkey=Gene;gene=glgA;gene_biotype=protein_coding;locus_tag=IY40_RS09435;old_locus_tag=IY40_09585 NZ_JPQY01000012.1 Protein Homology CDS 120095 121525 . - 0 ID=cds-WP_004930807.1;Parent=gene-IY40_RS09435;Dbxref=GenBank:WP_004930807.1;Name=WP_004930807.1;Ontology_term=GO:0004373;gbkey=CDS;gene=glgA;go_function=alpha-1%2C4-glucan glucosyltransferase (UDP-glucose donor) activity|0004373||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005174770.1;locus_tag=IY40_RS09435;product=glycogen synthase GlgA;protein_id=WP_004930807.1;transl_table=11 NZ_JPQY01000012.1 RefSeq gene 121661 122938 . - . ID=gene-IY40_RS09440;Name=glgC;gbkey=Gene;gene=glgC;gene_biotype=protein_coding;locus_tag=IY40_RS09440;old_locus_tag=IY40_09590 NZ_JPQY01000012.1 Protein Homology CDS 121661 122938 . - 0 ID=cds-WP_025304566.1;Parent=gene-IY40_RS09440;Dbxref=GenBank:WP_025304566.1;Name=WP_025304566.1;Ontology_term=GO:0005978,GO:0008878;gbkey=CDS;gene=glgC;go_function=glucose-1-phosphate adenylyltransferase activity|0008878||IEA;go_process=glycogen biosynthetic process|0005978||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004956377.1;locus_tag=IY40_RS09440;product=glucose-1-phosphate adenylyltransferase;protein_id=WP_025304566.1;transl_table=11 NZ_JPQY01000012.1 RefSeq gene 122954 124936 . - . ID=gene-IY40_RS09445;Name=glgX;gbkey=Gene;gene=glgX;gene_biotype=protein_coding;locus_tag=IY40_RS09445;old_locus_tag=IY40_09595 NZ_JPQY01000012.1 Protein Homology CDS 122954 124936 . - 0 ID=cds-WP_043138967.1;Parent=gene-IY40_RS09445;Dbxref=GenBank:WP_043138967.1;Name=WP_043138967.1;Ontology_term=GO:0005980,GO:0120549;gbkey=CDS;gene=glgX;go_function=limit dextrin alpha-1%2C6-maltotetraose-hydrolase activity|0120549||IEA;go_process=glycogen catabolic process|0005980||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004951425.1;locus_tag=IY40_RS09445;product=glycogen debranching protein GlgX;protein_id=WP_043138967.1;transl_table=11 NZ_JPQY01000012.1 RefSeq gene 124933 127119 . - . ID=gene-IY40_RS09450;Name=glgB;gbkey=Gene;gene=glgB;gene_biotype=protein_coding;locus_tag=IY40_RS09450;old_locus_tag=IY40_09600 NZ_JPQY01000012.1 Protein Homology CDS 124933 127119 . - 0 ID=cds-WP_043138971.1;Parent=gene-IY40_RS09450;Dbxref=GenBank:WP_043138971.1;Name=WP_043138971.1;Ontology_term=GO:0005978,GO:0003844;gbkey=CDS;gene=glgB;go_function=1%2C4-alpha-glucan branching enzyme activity|0003844||IEA;go_process=glycogen biosynthetic process|0005978||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004930818.1;locus_tag=IY40_RS09450;product=1%2C4-alpha-glucan branching enzyme;protein_id=WP_043138971.1;transl_table=11 NZ_JPQY01000012.1 RefSeq gene 127563 128666 . - . ID=gene-IY40_RS09455;Name=asd;gbkey=Gene;gene=asd;gene_biotype=protein_coding;locus_tag=IY40_RS09455;old_locus_tag=IY40_09605 NZ_JPQY01000012.1 Protein Homology CDS 127563 128666 . - 0 ID=cds-WP_016930397.1;Parent=gene-IY40_RS09455;Dbxref=GenBank:WP_016930397.1;Name=WP_016930397.1;Ontology_term=GO:0009086,GO:0009088,GO:0009089,GO:0009097,GO:0004073,GO:0050661;gbkey=CDS;gene=asd;go_function=aspartate-semialdehyde dehydrogenase activity|0004073||IEA,NADP binding|0050661||IEA;go_process=methionine biosynthetic process|0009086||IEA,threonine biosynthetic process|0009088||IEA,lysine biosynthetic process via diaminopimelate|0009089||IEA,isoleucine biosynthetic process|0009097||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009111079.1;locus_tag=IY40_RS09455;product=aspartate-semialdehyde dehydrogenase;protein_id=WP_016930397.1;transl_table=11 NZ_JPQY01000012.1 RefSeq gene 128985 129578 . + . ID=gene-IY40_RS09460;Name=IY40_RS09460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS09460;old_locus_tag=IY40_09610 NZ_JPQY01000012.1 Protein Homology CDS 128985 129578 . + 0 ID=cds-WP_004930825.1;Parent=gene-IY40_RS09460;Dbxref=GenBank:WP_004930825.1;Name=WP_004930825.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209508.1;locus_tag=IY40_RS09460;product=YhgN family NAAT transporter;protein_id=WP_004930825.1;transl_table=11 NZ_JPQY01000012.1 RefSeq gene 129609 130136 . - . ID=gene-IY40_RS09465;Name=gntK;gbkey=Gene;gene=gntK;gene_biotype=protein_coding;locus_tag=IY40_RS09465;old_locus_tag=IY40_09615 NZ_JPQY01000012.1 Protein Homology CDS 129609 130136 . - 0 ID=cds-WP_016930399.1;Parent=gene-IY40_RS09465;Dbxref=GenBank:WP_016930399.1;Name=WP_016930399.1;gbkey=CDS;gene=gntK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015379326.1;locus_tag=IY40_RS09465;product=gluconokinase;protein_id=WP_016930399.1;transl_table=11 NZ_JPQY01000012.1 RefSeq gene 130238 131554 . - . ID=gene-IY40_RS09470;Name=gntT;gbkey=Gene;gene=gntT;gene_biotype=protein_coding;locus_tag=IY40_RS09470;old_locus_tag=IY40_09620 NZ_JPQY01000012.1 Protein Homology CDS 130238 131554 . - 0 ID=cds-WP_016930400.1;Parent=gene-IY40_RS09470;Dbxref=GenBank:WP_016930400.1;Name=WP_016930400.1;gbkey=CDS;gene=gntT;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105910.1;locus_tag=IY40_RS09470;product=gluconate transporter;protein_id=WP_016930400.1;transl_table=11 NZ_JPQY01000012.1 RefSeq gene 131895 132890 . - . ID=gene-IY40_RS09475;Name=gntR;gbkey=Gene;gene=gntR;gene_biotype=protein_coding;locus_tag=IY40_RS09475;old_locus_tag=IY40_09625 NZ_JPQY01000012.1 Protein Homology CDS 131895 132890 . - 0 ID=cds-WP_043138978.1;Parent=gene-IY40_RS09475;Dbxref=GenBank:WP_043138978.1;Name=WP_043138978.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;gene=gntR;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462444.1;locus_tag=IY40_RS09475;product=gluconate operon transcriptional repressor GntR;protein_id=WP_043138978.1;transl_table=11 NZ_JPQY01000012.1 RefSeq gene 133185 133880 . - . ID=gene-IY40_RS09480;Name=IY40_RS09480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS09480;old_locus_tag=IY40_09630 NZ_JPQY01000012.1 Protein Homology CDS 133185 133880 . - 0 ID=cds-WP_004930835.1;Parent=gene-IY40_RS09480;Dbxref=GenBank:WP_004930835.1;Name=WP_004930835.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209515.1;locus_tag=IY40_RS09480;product=pirin family protein;protein_id=WP_004930835.1;transl_table=11 NZ_JPQY01000012.1 RefSeq gene 134271 134786 . + . ID=gene-IY40_RS09485;Name=IY40_RS09485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS09485;old_locus_tag=IY40_09635 NZ_JPQY01000012.1 Protein Homology CDS 134271 134786 . + 0 ID=cds-WP_025304571.1;Parent=gene-IY40_RS09485;Dbxref=GenBank:WP_025304571.1;Name=WP_025304571.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004930837.1;locus_tag=IY40_RS09485;product=GNAT family N-acetyltransferase;protein_id=WP_025304571.1;transl_table=11 NZ_JPQY01000012.1 RefSeq gene 134779 135960 . + . ID=gene-IY40_RS09490;Name=IY40_RS09490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS09490;old_locus_tag=IY40_09640 NZ_JPQY01000012.1 Protein Homology CDS 134779 135960 . + 0 ID=cds-WP_043138982.1;Parent=gene-IY40_RS09490;Dbxref=GenBank:WP_043138982.1;Name=WP_043138982.1;Ontology_term=GO:0006508,GO:0004177;gbkey=CDS;go_function=aminopeptidase activity|0004177||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015379328.1;locus_tag=IY40_RS09490;product=P1 family peptidase;protein_id=WP_043138982.1;transl_table=11 NZ_JPQY01000012.1 RefSeq gene 136022 136918 . - . ID=gene-IY40_RS09495;Name=iolE;gbkey=Gene;gene=iolE;gene_biotype=protein_coding;locus_tag=IY40_RS09495;old_locus_tag=IY40_09645 NZ_JPQY01000012.1 Protein Homology CDS 136022 136918 . - 0 ID=cds-WP_019455194.1;Parent=gene-IY40_RS09495;Dbxref=GenBank:WP_019455194.1;Name=WP_019455194.1;Ontology_term=GO:0019310,GO:0050114;gbkey=CDS;gene=iolE;go_function=myo-inosose-2 dehydratase activity|0050114||IEA;go_process=inositol catabolic process|0019310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224831.1;locus_tag=IY40_RS09495;product=myo-inosose-2 dehydratase;protein_id=WP_019455194.1;transl_table=11 NZ_JPQY01000012.1 RefSeq gene 136978 137862 . - . ID=gene-IY40_RS09500;Name=IY40_RS09500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS09500;old_locus_tag=IY40_09650 NZ_JPQY01000012.1 Protein Homology CDS 136978 137862 . - 0 ID=cds-WP_043138988.1;Parent=gene-IY40_RS09500;Dbxref=GenBank:WP_043138988.1;Name=WP_043138988.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000683955.1;locus_tag=IY40_RS09500;product=sugar phosphate isomerase/epimerase family protein;protein_id=WP_043138988.1;transl_table=11 NZ_JPQY01000012.1 RefSeq gene 137894 138916 . - . ID=gene-IY40_RS09505;Name=IY40_RS09505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS09505;old_locus_tag=IY40_09655 NZ_JPQY01000012.1 Protein Homology CDS 137894 138916 . - 0 ID=cds-WP_043138991.1;Parent=gene-IY40_RS09505;Dbxref=GenBank:WP_043138991.1;Name=WP_043138991.1;Ontology_term=GO:0000166,GO:0003824;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016266866.1;locus_tag=IY40_RS09505;product=Gfo/Idh/MocA family protein;protein_id=WP_043138991.1;transl_table=11 NZ_JPQY01000012.1 RefSeq gene 138958 140898 . - . ID=gene-IY40_RS09510;Name=iolD;gbkey=Gene;gene=iolD;gene_biotype=protein_coding;locus_tag=IY40_RS09510;old_locus_tag=IY40_09660 NZ_JPQY01000012.1 Protein Homology CDS 138958 140898 . - 0 ID=cds-WP_025304576.1;Parent=gene-IY40_RS09510;Dbxref=GenBank:WP_025304576.1;Name=WP_025304576.1;Ontology_term=GO:0019310,GO:0016823,GO:0030976;gbkey=CDS;gene=iolD;go_function=hydrolase activity%2C acting on acid carbon-carbon bonds%2C in ketonic substances|0016823||IEA,thiamine pyrophosphate binding|0030976||IEA;go_process=inositol catabolic process|0019310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011817368.1;locus_tag=IY40_RS09510;product=3D-(3%2C5/4)-trihydroxycyclohexane-1%2C2-dione acylhydrolase (decyclizing);protein_id=WP_025304576.1;transl_table=11 NZ_JPQY01000012.1 RefSeq gene 141444 143375 . + . ID=gene-IY40_RS09515;Name=IY40_RS09515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS09515;old_locus_tag=IY40_09670 NZ_JPQY01000012.1 Protein Homology CDS 141444 143375 . + 0 ID=cds-WP_025304577.1;Parent=gene-IY40_RS09515;Dbxref=GenBank:WP_025304577.1;Name=WP_025304577.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016930407.1;locus_tag=IY40_RS09515;product=bifunctional 5-dehydro-2-deoxygluconokinase/5-dehydro-2-deoxyphosphogluconate aldolase;protein_id=WP_025304577.1;transl_table=11 NZ_JPQY01000012.1 RefSeq gene 143579 144415 . + . ID=gene-IY40_RS09520;Name=IY40_RS09520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS09520;old_locus_tag=IY40_09675 NZ_JPQY01000012.1 Protein Homology CDS 143579 144415 . + 0 ID=cds-WP_004930856.1;Parent=gene-IY40_RS09520;Dbxref=GenBank:WP_004930856.1;Name=WP_004930856.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004951463.1;locus_tag=IY40_RS09520;product=MurR/RpiR family transcriptional regulator;protein_id=WP_004930856.1;transl_table=11 NZ_JPQY01000012.1 RefSeq gene 144454 145275 . - . ID=gene-IY40_RS09525;Name=iolB;gbkey=Gene;gene=iolB;gene_biotype=protein_coding;locus_tag=IY40_RS09525;old_locus_tag=IY40_09680 NZ_JPQY01000012.1 Protein Homology CDS 144454 145275 . - 0 ID=cds-WP_025304578.1;Parent=gene-IY40_RS09525;Dbxref=GenBank:WP_025304578.1;Name=WP_025304578.1;Ontology_term=GO:0019310,GO:0016861;gbkey=CDS;gene=iolB;go_function=intramolecular oxidoreductase activity%2C interconverting aldoses and ketoses|0016861||IEA;go_process=inositol catabolic process|0019310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004930866.1;locus_tag=IY40_RS09525;product=5-deoxy-glucuronate isomerase;protein_id=WP_025304578.1;transl_table=11 NZ_JPQY01000012.1 RefSeq gene 145353 146858 . - . ID=gene-IY40_RS09530;Name=IY40_RS09530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS09530;old_locus_tag=IY40_09685 NZ_JPQY01000012.1 Protein Homology CDS 145353 146858 . - 0 ID=cds-WP_043138995.1;Parent=gene-IY40_RS09530;Dbxref=GenBank:WP_043138995.1;Name=WP_043138995.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463282.1;locus_tag=IY40_RS09530;product=CoA-acylating methylmalonate-semialdehyde dehydrogenase;protein_id=WP_043138995.1;transl_table=11 NZ_JPQY01000012.1 RefSeq gene 147415 148857 . + . ID=gene-IY40_RS09535;Name=IY40_RS09535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS09535;old_locus_tag=IY40_09690 NZ_JPQY01000012.1 Protein Homology CDS 147415 148857 . + 0 ID=cds-WP_043138998.1;Parent=gene-IY40_RS09535;Dbxref=GenBank:WP_043138998.1;Name=WP_043138998.1;Ontology_term=GO:0008643,GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019455204.1;locus_tag=IY40_RS09535;product=sugar porter family MFS transporter;protein_id=WP_043138998.1;transl_table=11 NZ_JPQY01000012.1 RefSeq gene 148889 149725 . + . ID=gene-IY40_RS09540;Name=IY40_RS09540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS09540;old_locus_tag=IY40_09695 NZ_JPQY01000012.1 Protein Homology CDS 148889 149725 . + 0 ID=cds-WP_043139001.1;Parent=gene-IY40_RS09540;Dbxref=GenBank:WP_043139001.1;Name=WP_043139001.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013814886.1;locus_tag=IY40_RS09540;product=TIM barrel protein;protein_id=WP_043139001.1;transl_table=11 NZ_JPQY01000012.1 RefSeq gene 149761 150534 . - . ID=gene-IY40_RS09545;Name=fetB;gbkey=Gene;gene=fetB;gene_biotype=protein_coding;locus_tag=IY40_RS09545;old_locus_tag=IY40_09700 NZ_JPQY01000012.1 Protein Homology CDS 149761 150534 . - 0 ID=cds-WP_025304582.1;Parent=gene-IY40_RS09545;Dbxref=GenBank:WP_025304582.1;Name=WP_025304582.1;Ontology_term=GO:1903988,GO:0005886;gbkey=CDS;gene=fetB;go_component=plasma membrane|0005886||IEA;go_process=iron ion export across plasma membrane|1903988||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006328625.1;locus_tag=IY40_RS09545;product=iron efflux ABC transporter permease subunit FetB;protein_id=WP_025304582.1;transl_table=11 NZ_JPQY01000012.1 RefSeq gene 150521 151198 . - . ID=gene-IY40_RS09550;Name=fetA;gbkey=Gene;gene=fetA;gene_biotype=protein_coding;gene_synonym=ybbL;locus_tag=IY40_RS09550;old_locus_tag=IY40_09705 NZ_JPQY01000012.1 Protein Homology CDS 150521 151198 . - 0 ID=cds-WP_004930881.1;Parent=gene-IY40_RS09550;Dbxref=GenBank:WP_004930881.1;Name=WP_004930881.1;Ontology_term=GO:1903988,GO:0016887;gbkey=CDS;gene=fetA;go_function=ATP hydrolysis activity|0016887||IEA;go_process=iron ion export across plasma membrane|1903988||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020324712.1;locus_tag=IY40_RS09550;product=iron efflux ABC transporter ATP-binding subunit FetA;protein_id=WP_004930881.1;transl_table=11 NZ_JPQY01000012.1 RefSeq gene 151390 151677 . - . ID=gene-IY40_RS09555;Name=IY40_RS09555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS09555;old_locus_tag=IY40_09710 NZ_JPQY01000012.1 Protein Homology CDS 151390 151677 . - 0 ID=cds-WP_004930885.1;Parent=gene-IY40_RS09555;Dbxref=GenBank:WP_004930885.1;Name=WP_004930885.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004930885.1;locus_tag=IY40_RS09555;product=FaeA/PapI family transcriptional regulator;protein_id=WP_004930885.1;transl_table=11 NZ_JPQY01000012.1 RefSeq gene 151715 152836 . - . ID=gene-IY40_RS09560;Name=IY40_RS09560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS09560;old_locus_tag=IY40_09715 NZ_JPQY01000012.1 Protein Homology CDS 151715 152836 . - 0 ID=cds-WP_235211372.1;Parent=gene-IY40_RS09560;Dbxref=GenBank:WP_235211372.1;Name=WP_235211372.1;Ontology_term=GO:0006457;gbkey=CDS;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015379340.1;locus_tag=IY40_RS09560;product=FKBP-type peptidyl-prolyl cis-trans isomerase N-terminal domain-containing protein;protein_id=WP_235211372.1;transl_table=11 NZ_JPQY01000012.1 RefSeq gene 152866 153240 . - . ID=gene-IY40_RS09565;Name=IY40_RS09565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS09565;old_locus_tag=IY40_09720 NZ_JPQY01000012.1 Protein Homology CDS 152866 153240 . - 0 ID=cds-WP_373275267.1;Parent=gene-IY40_RS09565;Dbxref=GenBank:WP_373275267.1;Name=WP_373275267.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016930413.1;locus_tag=IY40_RS09565;product=hypothetical protein;protein_id=WP_373275267.1;transl_table=11 NZ_JPQY01000012.1 RefSeq gene 154037 154567 . + . ID=gene-IY40_RS09570;Name=IY40_RS09570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS09570;old_locus_tag=IY40_09725 NZ_JPQY01000012.1 Protein Homology CDS 154037 154567 . + 0 ID=cds-WP_015379342.1;Parent=gene-IY40_RS09570;Dbxref=GenBank:WP_015379342.1;Name=WP_015379342.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006317526.1;locus_tag=IY40_RS09570;product=fimbrial protein;protein_id=WP_015379342.1;transl_table=11 NZ_JPQY01000012.1 RefSeq gene 154659 155210 . + . ID=gene-IY40_RS09575;Name=IY40_RS09575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS09575;old_locus_tag=IY40_09730 NZ_JPQY01000012.1 Protein Homology CDS 154659 155210 . + 0 ID=cds-WP_025304586.1;Parent=gene-IY40_RS09575;Dbxref=GenBank:WP_025304586.1;Name=WP_025304586.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013814892.1;locus_tag=IY40_RS09575;product=fimbrial protein;protein_id=WP_025304586.1;transl_table=11 NZ_JPQY01000012.1 RefSeq gene 155297 157783 . + . ID=gene-IY40_RS09580;Name=IY40_RS09580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS09580;old_locus_tag=IY40_09735 NZ_JPQY01000012.1 Protein Homology CDS 155297 157783 . + 0 ID=cds-WP_050505149.1;Parent=gene-IY40_RS09580;Dbxref=GenBank:WP_050505149.1;Name=WP_050505149.1;Ontology_term=GO:0009297,GO:0015473,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=fimbrial usher porin activity|0015473||IEA;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004951490.1;locus_tag=IY40_RS09580;product=fimbria/pilus outer membrane usher protein;protein_id=WP_050505149.1;transl_table=11 NZ_JPQY01000012.1 RefSeq gene 157808 158554 . + . ID=gene-IY40_RS09585;Name=IY40_RS09585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS09585;old_locus_tag=IY40_09740 NZ_JPQY01000012.1 Protein Homology CDS 157808 158554 . + 0 ID=cds-WP_043139013.1;Parent=gene-IY40_RS09585;Dbxref=GenBank:WP_043139013.1;Name=WP_043139013.1;Ontology_term=GO:0006457,GO:0043711,GO:0030288;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_process=protein folding|0006457||IEA,pilus organization|0043711||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004930906.1;locus_tag=IY40_RS09585;product=fimbrial biogenesis chaperone;protein_id=WP_043139013.1;transl_table=11 NZ_JPQY01000012.1 RefSeq gene 158566 159177 . + . ID=gene-IY40_RS09590;Name=IY40_RS09590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS09590;old_locus_tag=IY40_09745 NZ_JPQY01000012.1 Protein Homology CDS 158566 159177 . + 0 ID=cds-WP_043139018.1;Parent=gene-IY40_RS09590;Dbxref=GenBank:WP_043139018.1;Name=WP_043139018.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013814895.1;locus_tag=IY40_RS09590;product=fimbrial protein;protein_id=WP_043139018.1;transl_table=11 NZ_JPQY01000012.1 RefSeq gene 159192 160196 . + . ID=gene-IY40_RS09595;Name=IY40_RS09595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS09595;old_locus_tag=IY40_09750 NZ_JPQY01000012.1 Protein Homology CDS 159192 160196 . + 0 ID=cds-WP_043139022.1;Parent=gene-IY40_RS09595;Dbxref=GenBank:WP_043139022.1;Name=WP_043139022.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019455215.1;locus_tag=IY40_RS09595;product=fimbrial protein;protein_id=WP_043139022.1;transl_table=11 NZ_JPQY01000012.1 RefSeq gene 160215 160751 . + . ID=gene-IY40_RS09600;Name=IY40_RS09600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS09600;old_locus_tag=IY40_09755 NZ_JPQY01000012.1 Protein Homology CDS 160215 160751 . + 0 ID=cds-WP_025304591.1;Parent=gene-IY40_RS09600;Dbxref=GenBank:WP_025304591.1;Name=WP_025304591.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004930913.1;locus_tag=IY40_RS09600;product=fimbrial protein;protein_id=WP_025304591.1;transl_table=11 NZ_JPQY01000012.1 RefSeq gene 160861 161484 . + . ID=gene-IY40_RS09605;Name=IY40_RS09605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS09605;old_locus_tag=IY40_09760 NZ_JPQY01000012.1 Protein Homology CDS 160861 161484 . + 0 ID=cds-WP_043139025.1;Parent=gene-IY40_RS09605;Dbxref=GenBank:WP_043139025.1;Name=WP_043139025.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004930915.1;locus_tag=IY40_RS09605;product=helix-turn-helix transcriptional regulator;protein_id=WP_043139025.1;transl_table=11 NZ_JPQY01000012.1 RefSeq gene 161564 163057 . + . ID=gene-IY40_RS09610;Name=pdxR;gbkey=Gene;gene=pdxR;gene_biotype=protein_coding;locus_tag=IY40_RS09610;old_locus_tag=IY40_09765 NZ_JPQY01000012.1 Protein Homology CDS 161564 163057 . + 0 ID=cds-WP_043139028.1;Parent=gene-IY40_RS09610;Dbxref=GenBank:WP_043139028.1;Name=WP_043139028.1;Ontology_term=GO:0042823,GO:2000142,GO:0070279;gbkey=CDS;gene=pdxR;go_function=vitamin B6 binding|0070279||IEA;go_process=pyridoxal phosphate biosynthetic process|0042823||IEA,regulation of DNA-templated transcription initiation|2000142||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004930934.1;locus_tag=IY40_RS09610;product=MocR-like pyridoxine biosynthesis transcription factor PdxR;protein_id=WP_043139028.1;transl_table=11 NZ_JPQY01000012.1 RefSeq gene 163054 163968 . - . ID=gene-IY40_RS09615;Name=IY40_RS09615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS09615;old_locus_tag=IY40_09770 NZ_JPQY01000012.1 Protein Homology CDS 163054 163968 . - 0 ID=cds-WP_043139032.1;Parent=gene-IY40_RS09615;Dbxref=GenBank:WP_043139032.1;Name=WP_043139032.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004946363.1;locus_tag=IY40_RS09615;product=DMT family transporter;protein_id=WP_043139032.1;transl_table=11 NZ_JPQY01000012.1 RefSeq gene 164266 165504 . + . ID=gene-IY40_RS09620;Name=IY40_RS09620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS09620;old_locus_tag=IY40_09775 NZ_JPQY01000012.1 Protein Homology CDS 164266 165504 . + 0 ID=cds-WP_043139037.1;Parent=gene-IY40_RS09620;Dbxref=GenBank:WP_043139037.1;Name=WP_043139037.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015379351.1;locus_tag=IY40_RS09620;product=SrfA family protein;protein_id=WP_043139037.1;transl_table=11 NZ_JPQY01000012.1 RefSeq gene 165504 168449 . + . ID=gene-IY40_RS09625;Name=IY40_RS09625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS09625;old_locus_tag=IY40_09780 NZ_JPQY01000012.1 Protein Homology CDS 165504 168449 . + 0 ID=cds-WP_043139129.1;Parent=gene-IY40_RS09625;Dbxref=GenBank:WP_043139129.1;Name=WP_043139129.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019079408.1;locus_tag=IY40_RS09625;product=virulence factor SrfB;protein_id=WP_043139129.1;transl_table=11 NZ_JPQY01000012.1 RefSeq gene 168446 170638 . + . ID=gene-IY40_RS09630;Name=IY40_RS09630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS09630;old_locus_tag=IY40_09785 NZ_JPQY01000012.1 Protein Homology CDS 168446 170638 . + 0 ID=cds-WP_043139041.1;Parent=gene-IY40_RS09630;Dbxref=GenBank:WP_043139041.1;Name=WP_043139041.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015379353.1;locus_tag=IY40_RS09630;product=virulence factor SrfC family protein;protein_id=WP_043139041.1;transl_table=11 NZ_JPQY01000012.1 RefSeq gene 170671 171570 . - . ID=gene-IY40_RS09635;Name=IY40_RS09635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS09635;old_locus_tag=IY40_09790 NZ_JPQY01000012.1 Protein Homology CDS 170671 171570 . - 0 ID=cds-WP_043139044.1;Parent=gene-IY40_RS09635;Dbxref=GenBank:WP_043139044.1;Name=WP_043139044.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015379354.1;locus_tag=IY40_RS09635;product=LysR substrate-binding domain-containing protein;protein_id=WP_043139044.1;transl_table=11 NZ_JPQY01000012.1 RefSeq gene 171712 172722 . + . ID=gene-IY40_RS09640;Name=IY40_RS09640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS09640;old_locus_tag=IY40_09795 NZ_JPQY01000012.1 Protein Homology CDS 171712 172722 . + 0 ID=cds-WP_025304599.1;Parent=gene-IY40_RS09640;Dbxref=GenBank:WP_025304599.1;Name=WP_025304599.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015368058.1;locus_tag=IY40_RS09640;product=aldo/keto reductase;protein_id=WP_025304599.1;transl_table=11 NZ_JPQY01000012.1 RefSeq gene 172776 173573 . + . ID=gene-IY40_RS09645;Name=IY40_RS09645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS09645;old_locus_tag=IY40_09800 NZ_JPQY01000012.1 Protein Homology CDS 172776 173573 . + 0 ID=cds-WP_043139048.1;Parent=gene-IY40_RS09645;Dbxref=GenBank:WP_043139048.1;Name=WP_043139048.1;Ontology_term=GO:0016491,GO:0070403;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000762717.1;locus_tag=IY40_RS09645;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_043139048.1;transl_table=11 NZ_JPQY01000012.1 RefSeq gene 173610 174026 . + . ID=gene-IY40_RS09650;Name=IY40_RS09650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS09650;old_locus_tag=IY40_09805 NZ_JPQY01000012.1 Protein Homology CDS 173610 174026 . + 0 ID=cds-WP_025304601.1;Parent=gene-IY40_RS09650;Dbxref=GenBank:WP_025304601.1;Name=WP_025304601.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004930958.1;locus_tag=IY40_RS09650;product=SRPBCC family protein;protein_id=WP_025304601.1;transl_table=11 NZ_JPQY01000012.1 RefSeq gene 174170 174586 . + . ID=gene-IY40_RS09655;Name=IY40_RS09655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS09655;old_locus_tag=IY40_09810 NZ_JPQY01000012.1 Protein Homology CDS 174170 174586 . + 0 ID=cds-WP_043139052.1;Parent=gene-IY40_RS09655;Dbxref=GenBank:WP_043139052.1;Name=WP_043139052.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004930960.1;locus_tag=IY40_RS09655;product=VOC family protein;protein_id=WP_043139052.1;transl_table=11 NZ_JPQY01000012.1 RefSeq gene 174724 174960 . + . ID=gene-IY40_RS09660;Name=IY40_RS09660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS09660;old_locus_tag=IY40_09815 NZ_JPQY01000012.1 GeneMarkS-2+ CDS 174724 174960 . + 0 ID=cds-WP_043139055.1;Parent=gene-IY40_RS09660;Dbxref=GenBank:WP_043139055.1;Name=WP_043139055.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IY40_RS09660;product=hypothetical protein;protein_id=WP_043139055.1;transl_table=11 NZ_JPQY01000012.1 RefSeq gene 174978 176177 . - . ID=gene-IY40_RS09665;Name=IY40_RS09665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS09665;old_locus_tag=IY40_09820 NZ_JPQY01000012.1 Protein Homology CDS 174978 176177 . - 0 ID=cds-WP_043139059.1;Parent=gene-IY40_RS09665;Dbxref=GenBank:WP_043139059.1;Name=WP_043139059.1;Ontology_term=GO:0016628,GO:0050660,GO:0050661;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors%2C NAD or NADP as acceptor|0016628||IEA,flavin adenine dinucleotide binding|0050660||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004930974.1;locus_tag=IY40_RS09665;product=BaiN/RdsA family NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_043139059.1;transl_table=11 NZ_JPQY01000012.1 RefSeq gene 176478 177980 . + . ID=gene-IY40_RS09670;Name=pitA;gbkey=Gene;gene=pitA;gene_biotype=protein_coding;locus_tag=IY40_RS09670;old_locus_tag=IY40_09825 NZ_JPQY01000012.1 Protein Homology CDS 176478 177980 . + 0 ID=cds-WP_043139063.1;Parent=gene-IY40_RS09670;Dbxref=GenBank:WP_043139063.1;Name=WP_043139063.1;Ontology_term=GO:0006817,GO:0016020;gbkey=CDS;gene=pitA;go_component=membrane|0016020||IEA;go_process=phosphate ion transport|0006817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011193267.1;locus_tag=IY40_RS09670;product=inorganic phosphate transporter PitA;protein_id=WP_043139063.1;transl_table=11 NZ_JPQY01000012.1 RefSeq gene 178054 178389 . - . ID=gene-IY40_RS09675;Name=uspB;gbkey=Gene;gene=uspB;gene_biotype=protein_coding;locus_tag=IY40_RS09675;old_locus_tag=IY40_09830 NZ_JPQY01000012.1 Protein Homology CDS 178054 178389 . - 0 ID=cds-WP_016930435.1;Parent=gene-IY40_RS09675;Dbxref=GenBank:WP_016930435.1;Name=WP_016930435.1;gbkey=CDS;gene=uspB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209527.1;locus_tag=IY40_RS09675;product=universal stress protein UspB;protein_id=WP_016930435.1;transl_table=11 NZ_JPQY01000012.1 RefSeq gene 178823 179596 . + . ID=gene-IY40_RS09680;Name=IY40_RS09680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS09680;old_locus_tag=IY40_09835 NZ_JPQY01000012.1 Protein Homology CDS 178823 179596 . + 0 ID=cds-WP_025304606.1;Parent=gene-IY40_RS09680;Dbxref=GenBank:WP_025304606.1;Name=WP_025304606.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009973227.1;locus_tag=IY40_RS09680;product=SDR family oxidoreductase;protein_id=WP_025304606.1;transl_table=11 NZ_JPQY01000012.1 RefSeq gene 179700 180608 . + . ID=gene-IY40_RS09685;Name=IY40_RS09685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS09685;old_locus_tag=IY40_09840 NZ_JPQY01000012.1 Protein Homology CDS 179700 180608 . + 0 ID=cds-WP_025304607.1;Parent=gene-IY40_RS09685;Dbxref=GenBank:WP_025304607.1;Name=WP_025304607.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019455232.1;locus_tag=IY40_RS09685;product=LysR family transcriptional regulator;protein_id=WP_025304607.1;transl_table=11 NZ_JPQY01000012.1 RefSeq gene 180876 181313 . + . ID=gene-IY40_RS09690;Name=uspA;gbkey=Gene;gene=uspA;gene_biotype=protein_coding;locus_tag=IY40_RS09690;old_locus_tag=IY40_09845 NZ_JPQY01000012.1 Protein Homology CDS 180876 181313 . + 0 ID=cds-WP_004930988.1;Parent=gene-IY40_RS09690;Dbxref=GenBank:WP_004930988.1;Name=WP_004930988.1;gbkey=CDS;gene=uspA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229315.1;locus_tag=IY40_RS09690;product=universal stress protein UspA;protein_id=WP_004930988.1;transl_table=11 NZ_JPQY01000012.1 RefSeq gene 181513 182856 . + . ID=gene-IY40_RS09695;Name=gdhA;gbkey=Gene;gene=gdhA;gene_biotype=protein_coding;locus_tag=IY40_RS09695;old_locus_tag=IY40_09850 NZ_JPQY01000012.1 Protein Homology CDS 181513 182856 . + 0 ID=cds-WP_043139067.1;Parent=gene-IY40_RS09695;Dbxref=GenBank:WP_043139067.1;Name=WP_043139067.1;Ontology_term=GO:0006520,GO:0016639;gbkey=CDS;gene=gdhA;go_function=oxidoreductase activity%2C acting on the CH-NH2 group of donors%2C NAD or NADP as acceptor|0016639||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012230168.1;locus_tag=IY40_RS09695;product=NADP-specific glutamate dehydrogenase;protein_id=WP_043139067.1;transl_table=11 NZ_JPQY01000012.1 RefSeq gene 183186 184172 . + . ID=gene-IY40_RS09700;Name=IY40_RS09700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS09700;old_locus_tag=IY40_09855 NZ_JPQY01000012.1 Protein Homology CDS 183186 184172 . + 0 ID=cds-WP_025304608.1;Parent=gene-IY40_RS09700;Dbxref=GenBank:WP_025304608.1;Name=WP_025304608.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013365221.1;locus_tag=IY40_RS09700;product=autoinducer 2 ABC transporter substrate-binding protein;protein_id=WP_025304608.1;transl_table=11 NZ_JPQY01000012.1 RefSeq gene 184278 185777 . + . ID=gene-IY40_RS09705;Name=IY40_RS09705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS09705;old_locus_tag=IY40_09860 NZ_JPQY01000012.1 Protein Homology CDS 184278 185777 . + 0 ID=cds-WP_043139072.1;Parent=gene-IY40_RS09705;Dbxref=GenBank:WP_043139072.1;Name=WP_043139072.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017894350.1;locus_tag=IY40_RS09705;product=sugar ABC transporter ATP-binding protein;protein_id=WP_043139072.1;transl_table=11 NZ_JPQY01000012.1 RefSeq gene 185770 186759 . + . ID=gene-IY40_RS09710;Name=IY40_RS09710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS09710;old_locus_tag=IY40_09865 NZ_JPQY01000012.1 Protein Homology CDS 185770 186759 . + 0 ID=cds-WP_043139077.1;Parent=gene-IY40_RS09710;Dbxref=GenBank:WP_043139077.1;Name=WP_043139077.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003835246.1;locus_tag=IY40_RS09710;product=ABC transporter permease;protein_id=WP_043139077.1;transl_table=11 NZ_JPQY01000012.1 RefSeq gene 186761 187714 . + . ID=gene-IY40_RS09715;Name=IY40_RS09715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS09715;old_locus_tag=IY40_09870 NZ_JPQY01000012.1 Protein Homology CDS 186761 187714 . + 0 ID=cds-WP_025304610.1;Parent=gene-IY40_RS09715;Dbxref=GenBank:WP_025304610.1;Name=WP_025304610.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011193178.1;locus_tag=IY40_RS09715;product=ABC transporter permease;protein_id=WP_025304610.1;transl_table=11 NZ_JPQY01000012.1 RefSeq gene 187725 189362 . + . ID=gene-IY40_RS09720;Name=IY40_RS09720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS09720;old_locus_tag=IY40_09875 NZ_JPQY01000012.1 Protein Homology CDS 187725 189362 . + 0 ID=cds-WP_043139081.1;Parent=gene-IY40_RS09720;Dbxref=GenBank:WP_043139081.1;Name=WP_043139081.1;Ontology_term=GO:0016310,GO:0005524,GO:0019200;gbkey=CDS;go_function=ATP binding|0005524||IEA,carbohydrate kinase activity|0019200||IEA;go_process=phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020457316.1;locus_tag=IY40_RS09720;product=FGGY-family carbohydrate kinase;protein_id=WP_043139081.1;transl_table=11 NZ_JPQY01000012.1 RefSeq gene 189362 189961 . + . ID=gene-IY40_RS09725;Name=IY40_RS09725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS09725;old_locus_tag=IY40_09880 NZ_JPQY01000012.1 Protein Homology CDS 189362 189961 . + 0 ID=cds-WP_043139085.1;Parent=gene-IY40_RS09725;Dbxref=GenBank:WP_043139085.1;Name=WP_043139085.1;Ontology_term=GO:1901135,GO:0097367;gbkey=CDS;go_function=carbohydrate derivative binding|0097367||IEA;go_process=carbohydrate derivative metabolic process|1901135||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004931004.1;locus_tag=IY40_RS09725;product=KpsF/GutQ family sugar-phosphate isomerase;protein_id=WP_043139085.1;transl_table=11 NZ_JPQY01000012.1 RefSeq gene 189990 190736 . - . ID=gene-IY40_RS09730;Name=rsmJ;gbkey=Gene;gene=rsmJ;gene_biotype=protein_coding;locus_tag=IY40_RS09730;old_locus_tag=IY40_09885 NZ_JPQY01000012.1 Protein Homology CDS 189990 190736 . - 0 ID=cds-WP_043139088.1;Parent=gene-IY40_RS09730;Dbxref=GenBank:WP_043139088.1;Name=WP_043139088.1;Ontology_term=GO:0031167,GO:0008990;gbkey=CDS;gene=rsmJ;go_function=rRNA (guanine-N2-)-methyltransferase activity|0008990||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012147374.1;locus_tag=IY40_RS09730;product=16S rRNA (guanine(1516)-N(2))-methyltransferase RsmJ;protein_id=WP_043139088.1;transl_table=11 NZ_JPQY01000012.1 RefSeq gene 190745 192787 . - . ID=gene-IY40_RS09735;Name=prlC;gbkey=Gene;gene=prlC;gene_biotype=protein_coding;locus_tag=IY40_RS09735;old_locus_tag=IY40_09890 NZ_JPQY01000012.1 Protein Homology CDS 190745 192787 . - 0 ID=cds-WP_025304614.1;Parent=gene-IY40_RS09735;Dbxref=GenBank:WP_025304614.1;Name=WP_025304614.1;Ontology_term=GO:0006508,GO:0004222;gbkey=CDS;gene=prlC;go_function=metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019084127.1;locus_tag=IY40_RS09735;product=oligopeptidase A;protein_id=WP_025304614.1;transl_table=11 NZ_JPQY01000012.1 RefSeq gene 192906 193367 . - . ID=gene-IY40_RS09740;Name=IY40_RS09740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS09740;old_locus_tag=IY40_09895 NZ_JPQY01000012.1 Protein Homology CDS 192906 193367 . - 0 ID=cds-WP_033651785.1;Parent=gene-IY40_RS09740;Dbxref=GenBank:WP_033651785.1;Name=WP_033651785.1;Ontology_term=GO:1904047;gbkey=CDS;go_function=S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015379372.1;locus_tag=IY40_RS09740;product=HIT family protein;protein_id=WP_033651785.1;transl_table=11 NZ_JPQY01000012.1 RefSeq gene 193384 193788 . - . ID=gene-IY40_RS09745;Name=IY40_RS09745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS09745;old_locus_tag=IY40_09900 NZ_JPQY01000012.1 Protein Homology CDS 193384 193788 . - 0 ID=cds-WP_025304616.1;Parent=gene-IY40_RS09745;Dbxref=GenBank:WP_025304616.1;Name=WP_025304616.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004931010.1;locus_tag=IY40_RS09745;product=ASCH domain-containing protein;protein_id=WP_025304616.1;transl_table=11 NZ_JPQY01000012.1 RefSeq gene 193924 194766 . + . ID=gene-IY40_RS09750;Name=IY40_RS09750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS09750;old_locus_tag=IY40_09905 NZ_JPQY01000012.1 Protein Homology CDS 193924 194766 . + 0 ID=cds-WP_004931012.1;Parent=gene-IY40_RS09750;Dbxref=GenBank:WP_004931012.1;Name=WP_004931012.1;Ontology_term=GO:0015976,GO:0070475,GO:0003723,GO:0008988,GO:1904047;gbkey=CDS;go_function=RNA binding|0003723||IEA,rRNA (adenine-N6-)-methyltransferase activity|0008988||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=carbon utilization|0015976||IEA,rRNA base methylation|0070475||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312398.1;locus_tag=IY40_RS09750;product=23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ;protein_id=WP_004931012.1;transl_table=11 NZ_JPQY01000012.1 RefSeq gene 194897 196249 . + . ID=gene-IY40_RS09755;Name=gorA;gbkey=Gene;gene=gorA;gene_biotype=protein_coding;locus_tag=IY40_RS09755;old_locus_tag=IY40_09910 NZ_JPQY01000012.1 Protein Homology CDS 194897 196249 . + 0 ID=cds-WP_025304617.1;Parent=gene-IY40_RS09755;Dbxref=GenBank:WP_025304617.1;Name=WP_025304617.1;Ontology_term=GO:0006749,GO:0045454,GO:0004362,GO:0050660,GO:0050661;gbkey=CDS;gene=gorA;go_function=glutathione-disulfide reductase (NADPH) activity|0004362||IEA,flavin adenine dinucleotide binding|0050660||IEA,NADP binding|0050661||IEA;go_process=glutathione metabolic process|0006749||IEA,cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003861215.1;locus_tag=IY40_RS09755;product=glutathione-disulfide reductase;protein_id=WP_025304617.1;transl_table=11 NZ_JPQY01000012.1 RefSeq gene 196327 196893 . - . ID=gene-IY40_RS09760;Name=IY40_RS09760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS09760;old_locus_tag=IY40_09915 NZ_JPQY01000012.1 Protein Homology CDS 196327 196893 . - 0 ID=cds-WP_043139094.1;Parent=gene-IY40_RS09760;Dbxref=GenBank:WP_043139094.1;Name=WP_043139094.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004951642.1;locus_tag=IY40_RS09760;product=DinB family protein;protein_id=WP_043139094.1;transl_table=11 NZ_JPQY01000012.1 RefSeq gene 196963 197814 . - . ID=gene-IY40_RS09765;Name=IY40_RS09765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS09765;old_locus_tag=IY40_09920 NZ_JPQY01000012.1 Protein Homology CDS 196963 197814 . - 0 ID=cds-WP_043139098.1;Parent=gene-IY40_RS09765;Dbxref=GenBank:WP_043139098.1;Name=WP_043139098.1;Ontology_term=GO:0009058,GO:0016853,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=isomerase activity|0016853||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016930450.1;locus_tag=IY40_RS09765;product=PhzF family phenazine biosynthesis protein;protein_id=WP_043139098.1;transl_table=11 NZ_JPQY01000012.1 RefSeq gene 197848 198477 . - . ID=gene-IY40_RS09770;Name=IY40_RS09770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS09770;old_locus_tag=IY40_09925 NZ_JPQY01000012.1 Protein Homology CDS 197848 198477 . - 0 ID=cds-WP_043139101.1;Parent=gene-IY40_RS09770;Dbxref=GenBank:WP_043139101.1;Name=WP_043139101.1;Ontology_term=GO:0006865,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015379376.1;locus_tag=IY40_RS09770;product=LysE family translocator;protein_id=WP_043139101.1;transl_table=11 NZ_JPQY01000012.1 RefSeq gene 198617 199966 . + . ID=gene-IY40_RS09775;Name=IY40_RS09775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS09775;old_locus_tag=IY40_09930 NZ_JPQY01000012.1 Protein Homology CDS 198617 199966 . + 0 ID=cds-WP_043139104.1;Parent=gene-IY40_RS09775;Dbxref=GenBank:WP_043139104.1;Name=WP_043139104.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016930452.1;locus_tag=IY40_RS09775;product=aminotransferase-like domain-containing protein;protein_id=WP_043139104.1;transl_table=11 NZ_JPQY01000012.1 RefSeq gene 200128 200622 . + . ID=gene-IY40_RS09780;Name=IY40_RS09780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS09780;old_locus_tag=IY40_09935 NZ_JPQY01000012.1 Protein Homology CDS 200128 200622 . + 0 ID=cds-WP_043139109.1;Parent=gene-IY40_RS09780;Dbxref=GenBank:WP_043139109.1;Name=WP_043139109.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004951652.1;locus_tag=IY40_RS09780;product=putative pterin-binding protein;protein_id=WP_043139109.1;transl_table=11 NZ_JPQY01000012.1 RefSeq gene 200619 202403 . + . ID=gene-IY40_RS09785;Name=IY40_RS09785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS09785;old_locus_tag=IY40_09940 NZ_JPQY01000012.1 Protein Homology CDS 200619 202403 . + 0 ID=cds-WP_025304623.1;Parent=gene-IY40_RS09785;Dbxref=GenBank:WP_025304623.1;Name=WP_025304623.1;Ontology_term=GO:0000160,GO:0007165,GO:0000155,GO:0000156,GO:0004673,GO:0005524;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,phosphorelay response regulator activity|0000156||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015379378.1;locus_tag=IY40_RS09785;product=ATP-binding response regulator;protein_id=WP_025304623.1;transl_table=11 NZ_JPQY01000012.1 RefSeq gene 202393 203244 . - . ID=gene-IY40_RS09790;Name=IY40_RS09790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS09790;old_locus_tag=IY40_09945 NZ_JPQY01000012.1 Protein Homology CDS 202393 203244 . - 0 ID=cds-WP_025304624.1;Parent=gene-IY40_RS09790;Dbxref=GenBank:WP_025304624.1;Name=WP_025304624.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015379379.1;locus_tag=IY40_RS09790;product=helix-turn-helix domain-containing protein;protein_id=WP_025304624.1;transl_table=11 NZ_JPQY01000012.1 RefSeq gene 203700 204000 . - . ID=gene-IY40_RS09795;Name=IY40_RS09795;end_range=204000,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS09795;partial=true NZ_JPQY01000012.1 Protein Homology CDS 203700 204000 . - 1 ID=cds-WP_043139116.1;Parent=gene-IY40_RS09795;Dbxref=GenBank:WP_043139116.1;Name=WP_043139116.1;Ontology_term=GO:0019867;end_range=204000,.;gbkey=CDS;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007732133.1;locus_tag=IY40_RS09795;partial=true;product=autotransporter outer membrane beta-barrel domain-containing protein;protein_id=WP_043139116.1;transl_table=11 ##sequence-region NZ_JPQY01000013.1 1 203982 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=615 NZ_JPQY01000013.1 RefSeq region 1 203982 . + . ID=NZ_JPQY01000013.1:1..203982;Dbxref=taxon:615;collected-by=Mahloro H. Serepa%3B Vincent M. Gray;collection-date=2013-04-11;country=South Africa: North West Province;gbkey=Src;genome=genomic;identified-by=Mahloro H. Serepa%3B Vincent M. Gray;isolation-source=entomopathogenic nematode Oscheius sp. MCB living in soil;mol_type=genomic DNA;nat-host=Oscheius sp. MCB;strain=MCB NZ_JPQY01000013.1 RefSeq gene 261 953 . + . ID=gene-IY40_RS09800;Name=IY40_RS09800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS09800;old_locus_tag=IY40_09955 NZ_JPQY01000013.1 Protein Homology CDS 261 953 . + 0 ID=cds-WP_080287126.1;Parent=gene-IY40_RS09800;Dbxref=GenBank:WP_080287126.1;Name=WP_080287126.1;Ontology_term=GO:0016740;gbkey=CDS;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004933346.1;locus_tag=IY40_RS09800;product=acyl-homoserine-lactone synthase;protein_id=WP_080287126.1;transl_table=11 NZ_JPQY01000013.1 RefSeq gene 954 1670 . - . ID=gene-IY40_RS09805;Name=IY40_RS09805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS09805;old_locus_tag=IY40_09960 NZ_JPQY01000013.1 Protein Homology CDS 954 1670 . - 0 ID=cds-WP_033636878.1;Parent=gene-IY40_RS09805;Dbxref=GenBank:WP_033636878.1;Name=WP_033636878.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004933348.1;locus_tag=IY40_RS09805;product=helix-turn-helix transcriptional regulator;protein_id=WP_033636878.1;transl_table=11 NZ_JPQY01000013.1 RefSeq gene 1871 2629 . + . ID=gene-IY40_RS09810;Name=IY40_RS09810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS09810;old_locus_tag=IY40_09965 NZ_JPQY01000013.1 Protein Homology CDS 1871 2629 . + 0 ID=cds-WP_043139164.1;Parent=gene-IY40_RS09810;Dbxref=GenBank:WP_043139164.1;Name=WP_043139164.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226946.1;locus_tag=IY40_RS09810;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_043139164.1;transl_table=11 NZ_JPQY01000013.1 RefSeq gene 2691 3761 . - . ID=gene-IY40_RS09815;Name=lptG;gbkey=Gene;gene=lptG;gene_biotype=protein_coding;locus_tag=IY40_RS09815;old_locus_tag=IY40_09970 NZ_JPQY01000013.1 Protein Homology CDS 2691 3761 . - 0 ID=cds-WP_019453290.1;Parent=gene-IY40_RS09815;Dbxref=GenBank:WP_019453290.1;Name=WP_019453290.1;Ontology_term=GO:0055085,GO:0015221,GO:0043190;gbkey=CDS;gene=lptG;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=lipopolysaccharide transmembrane transporter activity|0015221||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002223173.1;locus_tag=IY40_RS09815;product=LPS export ABC transporter permease LptG;protein_id=WP_019453290.1;transl_table=11 NZ_JPQY01000013.1 RefSeq gene 3761 4855 . - . ID=gene-IY40_RS09820;Name=lptF;gbkey=Gene;gene=lptF;gene_biotype=protein_coding;locus_tag=IY40_RS09820;old_locus_tag=IY40_09975 NZ_JPQY01000013.1 Protein Homology CDS 3761 4855 . - 0 ID=cds-WP_043139168.1;Parent=gene-IY40_RS09820;Dbxref=GenBank:WP_043139168.1;Name=WP_043139168.1;Ontology_term=GO:0055085,GO:0015221,GO:0043190;gbkey=CDS;gene=lptF;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=lipopolysaccharide transmembrane transporter activity|0015221||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004389287.1;locus_tag=IY40_RS09820;product=LPS export ABC transporter permease LptF;protein_id=WP_043139168.1;transl_table=11 NZ_JPQY01000013.1 RefSeq gene 5138 6649 . + . ID=gene-IY40_RS09825;Name=pepA;gbkey=Gene;gene=pepA;gene_biotype=protein_coding;locus_tag=IY40_RS09825;old_locus_tag=IY40_09980 NZ_JPQY01000013.1 Protein Homology CDS 5138 6649 . + 0 ID=cds-WP_004933352.1;Parent=gene-IY40_RS09825;Dbxref=GenBank:WP_004933352.1;Name=WP_004933352.1;Ontology_term=GO:0006508,GO:0019538,GO:0030145,GO:0070006;gbkey=CDS;gene=pepA;go_function=manganese ion binding|0030145||IEA,metalloaminopeptidase activity|0070006||IEA;go_process=proteolysis|0006508||IEA,protein metabolic process|0019538||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007767120.1;locus_tag=IY40_RS09825;product=leucyl aminopeptidase;protein_id=WP_004933352.1;transl_table=11 NZ_JPQY01000013.1 RefSeq gene 6734 7183 . + . ID=gene-IY40_RS09830;Name=IY40_RS09830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS09830;old_locus_tag=IY40_09985 NZ_JPQY01000013.1 Protein Homology CDS 6734 7183 . + 0 ID=cds-WP_025305119.1;Parent=gene-IY40_RS09830;Dbxref=GenBank:WP_025305119.1;Name=WP_025305119.1;Ontology_term=GO:0006260,GO:0006261,GO:0003677,GO:0003887;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA,DNA-templated DNA replication|0006261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209309.1;locus_tag=IY40_RS09830;product=DNA polymerase III subunit chi;protein_id=WP_025305119.1;transl_table=11 NZ_JPQY01000013.1 RefSeq gene 7196 10072 . + . ID=gene-IY40_RS09835;Name=IY40_RS09835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS09835;old_locus_tag=IY40_09990 NZ_JPQY01000013.1 Protein Homology CDS 7196 10072 . + 0 ID=cds-WP_025305118.1;Parent=gene-IY40_RS09835;Dbxref=GenBank:WP_025305118.1;Name=WP_025305118.1;Ontology_term=GO:0006438,GO:0000166,GO:0004812,GO:0004832,GO:0005524;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,valine-tRNA ligase activity|0004832||IEA,ATP binding|0005524||IEA;go_process=valyl-tRNA aminoacylation|0006438||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004720449.1;locus_tag=IY40_RS09835;product=valine--tRNA ligase;protein_id=WP_025305118.1;transl_table=11 NZ_JPQY01000013.1 RefSeq gene 10271 10774 . + . ID=gene-IY40_RS09840;Name=IY40_RS09840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS09840;old_locus_tag=IY40_09995 NZ_JPQY01000013.1 Protein Homology CDS 10271 10774 . + 0 ID=cds-WP_004933360.1;Parent=gene-IY40_RS09840;Dbxref=GenBank:WP_004933360.1;Name=WP_004933360.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304639.1;locus_tag=IY40_RS09840;product=GNAT family N-acetyltransferase;protein_id=WP_004933360.1;transl_table=11 NZ_JPQY01000013.1 RefSeq gene 11001 12608 . + . ID=gene-IY40_RS09845;Name=IY40_RS09845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS09845;old_locus_tag=IY40_10000 NZ_JPQY01000013.1 Protein Homology CDS 11001 12608 . + 0 ID=cds-WP_043139173.1;Parent=gene-IY40_RS09845;Dbxref=GenBank:WP_043139173.1;Name=WP_043139173.1;Ontology_term=GO:0016491,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019453294.1;locus_tag=IY40_RS09845;product=GMC family oxidoreductase;protein_id=WP_043139173.1;transl_table=11 NZ_JPQY01000013.1 RefSeq gene 12624 13388 . - . ID=gene-IY40_RS09850;Name=miaE;gbkey=Gene;gene=miaE;gene_biotype=protein_coding;locus_tag=IY40_RS09850;old_locus_tag=IY40_10005 NZ_JPQY01000013.1 Protein Homology CDS 12624 13388 . - 0 ID=cds-WP_015376459.1;Parent=gene-IY40_RS09850;Dbxref=GenBank:WP_015376459.1;Name=WP_015376459.1;Ontology_term=GO:0006400,GO:0004497,GO:0045301,GO:0046872;gbkey=CDS;gene=miaE;go_function=monooxygenase activity|0004497||IEA,tRNA 2-(methylsulfanyl)-N(6)-isopentenyladenosine(37) hydroxylase activity|0045301||IEA,metal ion binding|0046872||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004953030.1;locus_tag=IY40_RS09850;product=tRNA isopentenyl-2-thiomethyl-A-37 hydroxylase MiaE;protein_id=WP_015376459.1;transl_table=11 NZ_JPQY01000013.1 RefSeq gene 13567 13992 . - . ID=gene-IY40_RS09855;Name=rraB;gbkey=Gene;gene=rraB;gene_biotype=protein_coding;locus_tag=IY40_RS09855;old_locus_tag=IY40_10010 NZ_JPQY01000013.1 Protein Homology CDS 13567 13992 . - 0 ID=cds-WP_025305115.1;Parent=gene-IY40_RS09855;Dbxref=GenBank:WP_025305115.1;Name=WP_025305115.1;gbkey=CDS;gene=rraB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005156155.1;locus_tag=IY40_RS09855;product=ribonuclease E inhibitor RraB;protein_id=WP_025305115.1;transl_table=11 NZ_JPQY01000013.1 RefSeq gene 14155 15174 . + . ID=gene-IY40_RS09860;Name=argF;gbkey=Gene;gene=argF;gene_biotype=protein_coding;locus_tag=IY40_RS09860;old_locus_tag=IY40_10015 NZ_JPQY01000013.1 Protein Homology CDS 14155 15174 . + 0 ID=cds-WP_025305114.1;Parent=gene-IY40_RS09860;Dbxref=GenBank:WP_025305114.1;Name=WP_025305114.1;Ontology_term=GO:0042450,GO:0004585;gbkey=CDS;gene=argF;go_function=ornithine carbamoyltransferase activity|0004585||IEA;go_process=L-arginine biosynthetic process via ornithine|0042450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015376458.1;locus_tag=IY40_RS09860;product=ornithine carbamoyltransferase;protein_id=WP_025305114.1;transl_table=11 NZ_JPQY01000013.1 RefSeq gene 15369 16937 . + . ID=gene-IY40_RS09865;Name=IY40_RS09865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS09865;old_locus_tag=IY40_10020 NZ_JPQY01000013.1 Protein Homology CDS 15369 16937 . + 0 ID=cds-WP_043139179.1;Parent=gene-IY40_RS09865;Dbxref=GenBank:WP_043139179.1;Name=WP_043139179.1;Ontology_term=GO:0005524,GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019080649.1;locus_tag=IY40_RS09865;product=ABC transporter substrate-binding protein;protein_id=WP_043139179.1;transl_table=11 NZ_JPQY01000013.1 RefSeq gene 17227 18162 . + . ID=gene-IY40_RS09870;Name=pyrB;gbkey=Gene;gene=pyrB;gene_biotype=protein_coding;locus_tag=IY40_RS09870;old_locus_tag=IY40_10025 NZ_JPQY01000013.1 Protein Homology CDS 17227 18162 . + 0 ID=cds-WP_043139182.1;Parent=gene-IY40_RS09870;Dbxref=GenBank:WP_043139182.1;Name=WP_043139182.1;Ontology_term=GO:0006207,GO:0004070;gbkey=CDS;gene=pyrB;go_function=aspartate carbamoyltransferase activity|0004070||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224804.1;locus_tag=IY40_RS09870;product=aspartate carbamoyltransferase;protein_id=WP_043139182.1;transl_table=11 NZ_JPQY01000013.1 RefSeq gene 18175 18639 . + . ID=gene-IY40_RS09875;Name=pyrI;gbkey=Gene;gene=pyrI;gene_biotype=protein_coding;locus_tag=IY40_RS09875;old_locus_tag=IY40_10030 NZ_JPQY01000013.1 Protein Homology CDS 18175 18639 . + 0 ID=cds-WP_004933377.1;Parent=gene-IY40_RS09875;Dbxref=GenBank:WP_004933377.1;Name=WP_004933377.1;Ontology_term=GO:0006207,GO:0009347;gbkey=CDS;gene=pyrI;go_component=aspartate carbamoyltransferase complex|0009347||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004874063.1;locus_tag=IY40_RS09875;product=aspartate carbamoyltransferase regulatory subunit;protein_id=WP_004933377.1;transl_table=11 NZ_JPQY01000013.1 RefSeq gene 18799 19185 . + . ID=gene-IY40_RS09880;Name=ridA;gbkey=Gene;gene=ridA;gene_biotype=protein_coding;locus_tag=IY40_RS09880;old_locus_tag=IY40_10035 NZ_JPQY01000013.1 Protein Homology CDS 18799 19185 . + 0 ID=cds-WP_004933379.1;Parent=gene-IY40_RS09880;Dbxref=GenBank:WP_004933379.1;Name=WP_004933379.1;gbkey=CDS;gene=ridA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463318.1;locus_tag=IY40_RS09880;product=2-iminobutanoate/2-iminopropanoate deaminase;protein_id=WP_004933379.1;transl_table=11 NZ_JPQY01000013.1 RefSeq gene 19390 22374 . + . ID=gene-IY40_RS09885;Name=IY40_RS09885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS09885;old_locus_tag=IY40_10040 NZ_JPQY01000013.1 Protein Homology CDS 19390 22374 . + 0 ID=cds-WP_043139185.1;Parent=gene-IY40_RS09885;Dbxref=GenBank:WP_043139185.1;Name=WP_043139185.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015670672.1;locus_tag=IY40_RS09885;product=non-ribosomal peptide synthetase;protein_id=WP_043139185.1;transl_table=11 NZ_JPQY01000013.1 RefSeq gene 22411 24801 . - . ID=gene-IY40_RS09890;Name=IY40_RS09890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS09890;old_locus_tag=IY40_10045 NZ_JPQY01000013.1 Protein Homology CDS 22411 24801 . - 0 ID=cds-WP_043139188.1;Parent=gene-IY40_RS09890;Dbxref=GenBank:WP_043139188.1;Name=WP_043139188.1;Ontology_term=GO:0005975,GO:0004563;gbkey=CDS;go_function=beta-N-acetylhexosaminidase activity|0004563||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004952997.1;locus_tag=IY40_RS09890;product=beta-N-acetylhexosaminidase;protein_id=WP_043139188.1;transl_table=11 NZ_JPQY01000013.1 RefSeq gene 25013 27721 . - . ID=gene-IY40_RS09895;Name=mgtA;gbkey=Gene;gene=mgtA;gene_biotype=protein_coding;locus_tag=IY40_RS09895;old_locus_tag=IY40_10050 NZ_JPQY01000013.1 Protein Homology CDS 25013 27721 . - 0 ID=cds-WP_043139190.1;Parent=gene-IY40_RS09895;Dbxref=GenBank:WP_043139190.1;Name=WP_043139190.1;Ontology_term=GO:0015693,GO:0015444,GO:0016020;gbkey=CDS;gene=mgtA;go_component=membrane|0016020||IEA;go_function=P-type magnesium transporter activity|0015444||IEA;go_process=magnesium ion transport|0015693||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006323344.1;locus_tag=IY40_RS09895;product=magnesium-translocating P-type ATPase;protein_id=WP_043139190.1;transl_table=11 NZ_JPQY01000013.1 RefSeq gene 28146 29093 . + . ID=gene-IY40_RS09900;Name=treR;gbkey=Gene;gene=treR;gene_biotype=protein_coding;locus_tag=IY40_RS09900;old_locus_tag=IY40_10055 NZ_JPQY01000013.1 Protein Homology CDS 28146 29093 . + 0 ID=cds-WP_042783558.1;Parent=gene-IY40_RS09900;Dbxref=GenBank:WP_042783558.1;Name=WP_042783558.1;Ontology_term=GO:0005991,GO:0006355,GO:0045892,GO:0003677;gbkey=CDS;gene=treR;go_function=DNA binding|0003677||IEA;go_process=trehalose metabolic process|0005991||IEA,regulation of DNA-templated transcription|0006355||IEA,negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002426355.1;locus_tag=IY40_RS09900;product=trehalose operon repressor TreR;protein_id=WP_042783558.1;transl_table=11 NZ_JPQY01000013.1 RefSeq gene 29231 30646 . + . ID=gene-IY40_RS09905;Name=treB;gbkey=Gene;gene=treB;gene_biotype=protein_coding;locus_tag=IY40_RS09905;old_locus_tag=IY40_10060 NZ_JPQY01000013.1 Protein Homology CDS 29231 30646 . + 0 ID=cds-WP_043139193.1;Parent=gene-IY40_RS09905;Dbxref=GenBank:WP_043139193.1;Name=WP_043139193.1;Ontology_term=GO:0009401,GO:0015771,GO:0008982,GO:0015574,GO:0016020;gbkey=CDS;gene=treB;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA,trehalose transmembrane transporter activity|0015574||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,trehalose transport|0015771||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011817268.1;locus_tag=IY40_RS09905;product=PTS trehalose transporter subunit IIBC;protein_id=WP_043139193.1;transl_table=11 NZ_JPQY01000013.1 RefSeq gene 30714 32378 . + . ID=gene-IY40_RS09910;Name=treC;gbkey=Gene;gene=treC;gene_biotype=protein_coding;locus_tag=IY40_RS09910;old_locus_tag=IY40_10065 NZ_JPQY01000013.1 Protein Homology CDS 30714 32378 . + 0 ID=cds-WP_043139194.1;Parent=gene-IY40_RS09910;Dbxref=GenBank:WP_043139194.1;Name=WP_043139194.1;Ontology_term=GO:0005991,GO:0008788,GO:0005737;gbkey=CDS;gene=treC;go_component=cytoplasm|0005737||IEA;go_function=alpha%2Calpha-phosphotrehalase activity|0008788||IEA;go_process=trehalose metabolic process|0005991||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016929288.1;locus_tag=IY40_RS09910;product=alpha%2Calpha-phosphotrehalase;protein_id=WP_043139194.1;transl_table=11 NZ_JPQY01000013.1 RefSeq gene 32407 32931 . - . ID=gene-IY40_RS09915;Name=IY40_RS09915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS09915;old_locus_tag=IY40_10070 NZ_JPQY01000013.1 Protein Homology CDS 32407 32931 . - 0 ID=cds-WP_042783555.1;Parent=gene-IY40_RS09915;Dbxref=GenBank:WP_042783555.1;Name=WP_042783555.1;Ontology_term=GO:0008753,GO:0009055,GO:0010181,GO:0050136;gbkey=CDS;go_function=NADPH dehydrogenase (quinone) activity|0008753||IEA,electron transfer activity|0009055||IEA,FMN binding|0010181||IEA,NADH dehydrogenase (quinone) (non-electrogenic) activity|0050136||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004933401.1;locus_tag=IY40_RS09915;product=NAD(P)H-dependent oxidoreductase;protein_id=WP_042783555.1;transl_table=11 NZ_JPQY01000013.1 RefSeq gene 33037 33951 . + . ID=gene-IY40_RS09920;Name=IY40_RS09920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS09920;old_locus_tag=IY40_10075 NZ_JPQY01000013.1 Protein Homology CDS 33037 33951 . + 0 ID=cds-WP_043139197.1;Parent=gene-IY40_RS09920;Dbxref=GenBank:WP_043139197.1;Name=WP_043139197.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016929290.1;locus_tag=IY40_RS09920;product=LysR family transcriptional regulator;protein_id=WP_043139197.1;transl_table=11 NZ_JPQY01000013.1 RefSeq gene 34196 36334 . + . ID=gene-IY40_RS09925;Name=nrdD;gbkey=Gene;gene=nrdD;gene_biotype=protein_coding;locus_tag=IY40_RS09925;old_locus_tag=IY40_10080 NZ_JPQY01000013.1 Protein Homology CDS 34196 36334 . + 0 ID=cds-WP_043139200.1;Parent=gene-IY40_RS09925;Dbxref=GenBank:WP_043139200.1;Name=WP_043139200.1;Ontology_term=GO:0006260,GO:0008998;gbkey=CDS;gene=nrdD;go_function=ribonucleoside-triphosphate reductase (thioredoxin) activity|0008998||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224791.1;locus_tag=IY40_RS09925;product=anaerobic ribonucleoside-triphosphate reductase;protein_id=WP_043139200.1;transl_table=11 NZ_JPQY01000013.1 RefSeq gene 36503 36967 . + . ID=gene-IY40_RS09930;Name=nrdG;gbkey=Gene;gene=nrdG;gene_biotype=protein_coding;locus_tag=IY40_RS09930;old_locus_tag=IY40_10085 NZ_JPQY01000013.1 Protein Homology CDS 36503 36967 . + 0 ID=cds-WP_043139201.1;Parent=gene-IY40_RS09930;Dbxref=GenBank:WP_043139201.1;Name=WP_043139201.1;Ontology_term=GO:0043365,GO:0051539;gbkey=CDS;gene=nrdG;go_function=[formate-C-acetyltransferase]-activating enzyme activity|0043365||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463312.1;locus_tag=IY40_RS09930;product=anaerobic ribonucleoside-triphosphate reductase-activating protein;protein_id=WP_043139201.1;transl_table=11 NZ_JPQY01000013.1 RefSeq gene 37219 37803 . + . ID=gene-IY40_RS09935;Name=IY40_RS09935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS09935;old_locus_tag=IY40_10090 NZ_JPQY01000013.1 Protein Homology CDS 37219 37803 . + 0 ID=cds-WP_043139204.1;Parent=gene-IY40_RS09935;Dbxref=GenBank:WP_043139204.1;Name=WP_043139204.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309691.1;locus_tag=IY40_RS09935;product=helix-turn-helix domain-containing protein;protein_id=WP_043139204.1;transl_table=11 NZ_JPQY01000013.1 RefSeq gene 37823 38266 . - . ID=gene-IY40_RS25220;Name=IY40_RS25220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS25220 NZ_JPQY01000013.1 Protein Homology CDS 37823 38266 . - 0 ID=cds-WP_060448237.1;Parent=gene-IY40_RS25220;Dbxref=GenBank:WP_060448237.1;Name=WP_060448237.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020079039.1;locus_tag=IY40_RS25220;product=acetyltransferase;protein_id=WP_060448237.1;transl_table=11 NZ_JPQY01000013.1 RefSeq gene 38498 39553 . - . ID=gene-IY40_RS09945;Name=IY40_RS09945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS09945;old_locus_tag=IY40_10100 NZ_JPQY01000013.1 Protein Homology CDS 38498 39553 . - 0 ID=cds-WP_043139211.1;Parent=gene-IY40_RS09945;Dbxref=GenBank:WP_043139211.1;Name=WP_043139211.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015376440.1;locus_tag=IY40_RS09945;product=permease;protein_id=WP_043139211.1;transl_table=11 NZ_JPQY01000013.1 RefSeq gene 39780 40508 . + . ID=gene-IY40_RS09950;Name=phnF;gbkey=Gene;gene=phnF;gene_biotype=protein_coding;locus_tag=IY40_RS09950;old_locus_tag=IY40_10105 NZ_JPQY01000013.1 Protein Homology CDS 39780 40508 . + 0 ID=cds-WP_015376439.1;Parent=gene-IY40_RS09950;Dbxref=GenBank:WP_015376439.1;Name=WP_015376439.1;gbkey=CDS;gene=phnF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004952946.1;locus_tag=IY40_RS09950;product=phosphonate metabolism transcriptional regulator PhnF;protein_id=WP_015376439.1;transl_table=11 NZ_JPQY01000013.1 RefSeq gene 40509 40952 . + . ID=gene-IY40_RS09955;Name=phnG;gbkey=Gene;gene=phnG;gene_biotype=protein_coding;locus_tag=IY40_RS09955;old_locus_tag=IY40_10110 NZ_JPQY01000013.1 Protein Homology CDS 40509 40952 . + 0 ID=cds-WP_043139214.1;Parent=gene-IY40_RS09955;Dbxref=GenBank:WP_043139214.1;Name=WP_043139214.1;Ontology_term=GO:0015716,GO:0019634;gbkey=CDS;gene=phnG;go_process=organic phosphonate transport|0015716||IEA,organic phosphonate metabolic process|0019634||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012004979.1;locus_tag=IY40_RS09955;product=phosphonate C-P lyase system protein PhnG;protein_id=WP_043139214.1;transl_table=11 NZ_JPQY01000013.1 RefSeq gene 40956 41537 . + . ID=gene-IY40_RS09960;Name=phnH;gbkey=Gene;gene=phnH;gene_biotype=protein_coding;locus_tag=IY40_RS09960;old_locus_tag=IY40_10115 NZ_JPQY01000013.1 Protein Homology CDS 40956 41537 . + 0 ID=cds-WP_043139217.1;Parent=gene-IY40_RS09960;Dbxref=GenBank:WP_043139217.1;Name=WP_043139217.1;Ontology_term=GO:0019634;gbkey=CDS;gene=phnH;go_process=organic phosphonate metabolic process|0019634||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011191648.1;locus_tag=IY40_RS09960;product=phosphonate C-P lyase system protein PhnH;protein_id=WP_043139217.1;transl_table=11 NZ_JPQY01000013.1 RefSeq gene 41537 42622 . + . ID=gene-IY40_RS09965;Name=IY40_RS09965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS09965;old_locus_tag=IY40_10120 NZ_JPQY01000013.1 Protein Homology CDS 41537 42622 . + 0 ID=cds-WP_043139221.1;Parent=gene-IY40_RS09965;Dbxref=GenBank:WP_043139221.1;Name=WP_043139221.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004933417.1;locus_tag=IY40_RS09965;product=carbon-phosphorus lyase complex subunit PhnI;protein_id=WP_043139221.1;transl_table=11 NZ_JPQY01000013.1 RefSeq gene 42615 43475 . + . ID=gene-IY40_RS09970;Name=IY40_RS09970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS09970;old_locus_tag=IY40_10125 NZ_JPQY01000013.1 Protein Homology CDS 42615 43475 . + 0 ID=cds-WP_019453317.1;Parent=gene-IY40_RS09970;Dbxref=GenBank:WP_019453317.1;Name=WP_019453317.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016929301.1;locus_tag=IY40_RS09970;product=alpha-D-ribose 1-methylphosphonate 5-phosphate C-P-lyase PhnJ;protein_id=WP_019453317.1;transl_table=11 NZ_JPQY01000013.1 RefSeq gene 43475 44263 . + . ID=gene-IY40_RS09975;Name=phnK;gbkey=Gene;gene=phnK;gene_biotype=protein_coding;locus_tag=IY40_RS09975;old_locus_tag=IY40_10130 NZ_JPQY01000013.1 Protein Homology CDS 43475 44263 . + 0 ID=cds-WP_033636845.1;Parent=gene-IY40_RS09975;Dbxref=GenBank:WP_033636845.1;Name=WP_033636845.1;Ontology_term=GO:0019634,GO:0018835;gbkey=CDS;gene=phnK;go_function=carbon phosphorus lyase activity|0018835||IEA;go_process=organic phosphonate metabolic process|0019634||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019453318.1;locus_tag=IY40_RS09975;product=phosphonate C-P lyase system protein PhnK;protein_id=WP_033636845.1;transl_table=11 NZ_JPQY01000013.1 RefSeq gene 44280 44984 . + . ID=gene-IY40_RS09980;Name=phnL;gbkey=Gene;gene=phnL;gene_biotype=protein_coding;locus_tag=IY40_RS09980;old_locus_tag=IY40_10135 NZ_JPQY01000013.1 Protein Homology CDS 44280 44984 . + 0 ID=cds-WP_043139228.1;Parent=gene-IY40_RS09980;Dbxref=GenBank:WP_043139228.1;Name=WP_043139228.1;Ontology_term=GO:0019634,GO:0018835;gbkey=CDS;gene=phnL;go_function=carbon phosphorus lyase activity|0018835||IEA;go_process=organic phosphonate metabolic process|0019634||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015376434.1;locus_tag=IY40_RS09980;product=phosphonate C-P lyase system protein PhnL;protein_id=WP_043139228.1;transl_table=11 NZ_JPQY01000013.1 RefSeq gene 44984 46120 . + . ID=gene-IY40_RS09985;Name=phnM;gbkey=Gene;gene=phnM;gene_biotype=protein_coding;locus_tag=IY40_RS09985;old_locus_tag=IY40_10140 NZ_JPQY01000013.1 Protein Homology CDS 44984 46120 . + 0 ID=cds-WP_015376433.1;Parent=gene-IY40_RS09985;Dbxref=GenBank:WP_015376433.1;Name=WP_015376433.1;Ontology_term=GO:0019700,GO:0016810;gbkey=CDS;gene=phnM;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA;go_process=organic phosphonate catabolic process|0019700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313105.1;locus_tag=IY40_RS09985;product=alpha-D-ribose 1-methylphosphonate 5-triphosphate diphosphatase;protein_id=WP_015376433.1;transl_table=11 NZ_JPQY01000013.1 RefSeq gene 46120 46689 . + . ID=gene-IY40_RS09990;Name=phnN;gbkey=Gene;gene=phnN;gene_biotype=protein_coding;locus_tag=IY40_RS09990;old_locus_tag=IY40_10145 NZ_JPQY01000013.1 Protein Homology CDS 46120 46689 . + 0 ID=cds-WP_043139232.1;Parent=gene-IY40_RS09990;Dbxref=GenBank:WP_043139232.1;Name=WP_043139232.1;Ontology_term=GO:0006015,GO:0033863;gbkey=CDS;gene=phnN;go_function=ribose 1%2C5-bisphosphate phosphokinase activity|0033863||IEA;go_process=5-phosphoribose 1-diphosphate biosynthetic process|0006015||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004933430.1;locus_tag=IY40_RS09990;product=ribose 1%2C5-bisphosphokinase;protein_id=WP_043139232.1;transl_table=11 NZ_JPQY01000013.1 RefSeq gene 46686 47288 . + . ID=gene-IY40_RS09995;Name=IY40_RS09995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS09995;old_locus_tag=IY40_10150 NZ_JPQY01000013.1 Protein Homology CDS 46686 47288 . + 0 ID=cds-WP_015376431.1;Parent=gene-IY40_RS09995;Dbxref=GenBank:WP_015376431.1;Name=WP_015376431.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017891395.1;locus_tag=IY40_RS09995;product=DapH/DapD/GlmU-related protein;protein_id=WP_015376431.1;transl_table=11 NZ_JPQY01000013.1 RefSeq gene 47302 48084 . + . ID=gene-IY40_RS10000;Name=phnP;gbkey=Gene;gene=phnP;gene_biotype=protein_coding;locus_tag=IY40_RS10000;old_locus_tag=IY40_10155 NZ_JPQY01000013.1 Protein Homology CDS 47302 48084 . + 0 ID=cds-WP_043139236.1;Parent=gene-IY40_RS10000;Dbxref=GenBank:WP_043139236.1;Name=WP_043139236.1;Ontology_term=GO:0019700,GO:0008081;gbkey=CDS;gene=phnP;go_function=phosphoric diester hydrolase activity|0008081||IEA;go_process=organic phosphonate catabolic process|0019700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004952921.1;locus_tag=IY40_RS10000;product=phosphonate metabolism protein PhnP;protein_id=WP_043139236.1;transl_table=11 NZ_JPQY01000013.1 RefSeq gene 48041 48673 . - . ID=gene-IY40_RS10005;Name=IY40_RS10005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS10005;old_locus_tag=IY40_10160 NZ_JPQY01000013.1 Protein Homology CDS 48041 48673 . - 0 ID=cds-WP_043139239.1;Parent=gene-IY40_RS10005;Dbxref=GenBank:WP_043139239.1;Name=WP_043139239.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019453322.1;locus_tag=IY40_RS10005;product=NAD(P)H-binding protein;protein_id=WP_043139239.1;transl_table=11 NZ_JPQY01000013.1 RefSeq gene 48704 49144 . - . ID=gene-IY40_RS10010;Name=IY40_RS10010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS10010;old_locus_tag=IY40_10165 NZ_JPQY01000013.1 Protein Homology CDS 48704 49144 . - 0 ID=cds-WP_043139243.1;Parent=gene-IY40_RS10010;Dbxref=GenBank:WP_043139243.1;Name=WP_043139243.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019453323.1;locus_tag=IY40_RS10010;product=YhbP family protein;protein_id=WP_043139243.1;transl_table=11 NZ_JPQY01000013.1 RefSeq gene 49578 49682 . + . ID=gene-IY40_RS25730;Name=speFL;gbkey=Gene;gene=speFL;gene_biotype=protein_coding;locus_tag=IY40_RS25730 NZ_JPQY01000013.1 Protein Homology CDS 49578 49682 . + 0 ID=cds-WP_004933443.1;Parent=gene-IY40_RS25730;Dbxref=GenBank:WP_004933443.1;Name=WP_004933443.1;gbkey=CDS;gene=speFL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001312672.1;locus_tag=IY40_RS25730;product=leader peptide SpeFL;protein_id=WP_004933443.1;transl_table=11 NZ_JPQY01000013.1 RefSeq gene 49955 52117 . + . ID=gene-IY40_RS10015;Name=speF;gbkey=Gene;gene=speF;gene_biotype=protein_coding;locus_tag=IY40_RS10015;old_locus_tag=IY40_10170 NZ_JPQY01000013.1 Protein Homology CDS 49955 52117 . + 0 ID=cds-WP_043139246.1;Parent=gene-IY40_RS10015;Dbxref=GenBank:WP_043139246.1;Name=WP_043139246.1;Ontology_term=GO:0006520,GO:0004586;gbkey=CDS;gene=speF;go_function=ornithine decarboxylase activity|0004586||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015376427.1;locus_tag=IY40_RS10015;product=ornithine decarboxylase SpeF;protein_id=WP_043139246.1;transl_table=11 NZ_JPQY01000013.1 RefSeq gene 52180 53496 . + . ID=gene-IY40_RS10020;Name=potE;gbkey=Gene;gene=potE;gene_biotype=protein_coding;locus_tag=IY40_RS10020;old_locus_tag=IY40_10175 NZ_JPQY01000013.1 Protein Homology CDS 52180 53496 . + 0 ID=cds-WP_043139426.1;Parent=gene-IY40_RS10020;Dbxref=GenBank:WP_043139426.1;Name=WP_043139426.1;Ontology_term=GO:0015822,GO:0015847,GO:0055085,GO:0015496,GO:0016020;gbkey=CDS;gene=potE;go_component=membrane|0016020||IEA;go_function=putrescine:ornithine antiporter activity|0015496||IEA;go_process=ornithine transport|0015822||IEA,putrescine transport|0015847||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015698582.1;locus_tag=IY40_RS10020;product=putrescine-ornithine antiporter;protein_id=WP_043139426.1;transl_table=11 NZ_JPQY01000013.1 RefSeq gene 53583 53888 . + . ID=gene-IY40_RS10025;Name=IY40_RS10025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS10025;old_locus_tag=IY40_10180 NZ_JPQY01000013.1 Protein Homology CDS 53583 53888 . + 0 ID=cds-WP_025305084.1;Parent=gene-IY40_RS10025;Dbxref=GenBank:WP_025305084.1;Name=WP_025305084.1;Ontology_term=GO:0004518;gbkey=CDS;go_function=nuclease activity|0004518||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015376425.1;locus_tag=IY40_RS10025;product=GIY-YIG nuclease family protein;protein_id=WP_025305084.1;transl_table=11 NZ_JPQY01000013.1 RefSeq gene 53875 54378 . - . ID=gene-IY40_RS10030;Name=IY40_RS10030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS10030;old_locus_tag=IY40_10185 NZ_JPQY01000013.1 Protein Homology CDS 53875 54378 . - 0 ID=cds-WP_043139248.1;Parent=gene-IY40_RS10030;Dbxref=GenBank:WP_043139248.1;Name=WP_043139248.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209273.1;locus_tag=IY40_RS10030;product=GNAT family N-acetyltransferase;protein_id=WP_043139248.1;transl_table=11 NZ_JPQY01000013.1 RefSeq gene 54372 54893 . - . ID=gene-IY40_RS10035;Name=ubiT;gbkey=Gene;gene=ubiT;gene_biotype=protein_coding;locus_tag=IY40_RS10035;old_locus_tag=IY40_10190 NZ_JPQY01000013.1 Protein Homology CDS 54372 54893 . - 0 ID=cds-WP_043139429.1;Parent=gene-IY40_RS10035;Dbxref=GenBank:WP_043139429.1;Name=WP_043139429.1;Ontology_term=GO:0006744,GO:0110142;gbkey=CDS;gene=ubiT;go_component=ubiquinone biosynthesis complex|0110142||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209272.1;locus_tag=IY40_RS10035;product=ubiquinone anaerobic biosynthesis accessory factor UbiT;protein_id=WP_043139429.1;transl_table=11 NZ_JPQY01000013.1 RefSeq gene 55152 56147 . + . ID=gene-IY40_RS10040;Name=ubiU;gbkey=Gene;gene=ubiU;gene_biotype=protein_coding;locus_tag=IY40_RS10040;old_locus_tag=IY40_10195 NZ_JPQY01000013.1 Protein Homology CDS 55152 56147 . + 0 ID=cds-WP_015376422.1;Parent=gene-IY40_RS10040;Dbxref=GenBank:WP_015376422.1;Name=WP_015376422.1;Ontology_term=GO:0006744;gbkey=CDS;gene=ubiU;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017457364.1;locus_tag=IY40_RS10040;product=ubiquinone anaerobic biosynthesis protein UbiU;protein_id=WP_015376422.1;transl_table=11 NZ_JPQY01000013.1 RefSeq gene 56159 57037 . + . ID=gene-IY40_RS10045;Name=IY40_RS10045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS10045;old_locus_tag=IY40_10200 NZ_JPQY01000013.1 Protein Homology CDS 56159 57037 . + 0 ID=cds-WP_043139250.1;Parent=gene-IY40_RS10045;Dbxref=GenBank:WP_043139250.1;Name=WP_043139250.1;Ontology_term=GO:0006744;gbkey=CDS;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013316329.1;locus_tag=IY40_RS10045;product=U32 family peptidase;protein_id=WP_043139250.1;transl_table=11 NZ_JPQY01000013.1 RefSeq gene 57073 58215 . - . ID=gene-IY40_RS10050;Name=IY40_RS10050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS10050;old_locus_tag=IY40_10205 NZ_JPQY01000013.1 Protein Homology CDS 57073 58215 . - 0 ID=cds-WP_043139253.1;Parent=gene-IY40_RS10050;Dbxref=GenBank:WP_043139253.1;Name=WP_043139253.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006323279.1;locus_tag=IY40_RS10050;product=ABC transporter permease;protein_id=WP_043139253.1;transl_table=11 NZ_JPQY01000013.1 RefSeq gene 58212 59366 . - . ID=gene-IY40_RS10055;Name=IY40_RS10055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS10055;old_locus_tag=IY40_10210 NZ_JPQY01000013.1 Protein Homology CDS 58212 59366 . - 0 ID=cds-WP_025305061.1;Parent=gene-IY40_RS10055;Dbxref=GenBank:WP_025305061.1;Name=WP_025305061.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017891386.1;locus_tag=IY40_RS10055;product=ABC transporter permease;protein_id=WP_025305061.1;transl_table=11 NZ_JPQY01000013.1 RefSeq gene 59348 60319 . - . ID=gene-IY40_RS10060;Name=IY40_RS10060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS10060;old_locus_tag=IY40_10215 NZ_JPQY01000013.1 Protein Homology CDS 59348 60319 . - 0 ID=cds-WP_025305060.1;Parent=gene-IY40_RS10060;Dbxref=GenBank:WP_025305060.1;Name=WP_025305060.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017891385.1;locus_tag=IY40_RS10060;product=HlyD family secretion protein;protein_id=WP_025305060.1;transl_table=11 NZ_JPQY01000013.1 RefSeq gene 60551 61564 . + . ID=gene-IY40_RS10065;Name=IY40_RS10065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS10065;old_locus_tag=IY40_10225 NZ_JPQY01000013.1 Protein Homology CDS 60551 61564 . + 0 ID=cds-WP_025305059.1;Parent=gene-IY40_RS10065;Dbxref=GenBank:WP_025305059.1;Name=WP_025305059.1;Ontology_term=GO:0016705;gbkey=CDS;go_function=oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen|0016705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006323274.1;locus_tag=IY40_RS10065;product=luciferase-like monooxygenase;protein_id=WP_025305059.1;transl_table=11 NZ_JPQY01000013.1 RefSeq gene 61603 61842 . - . ID=gene-IY40_RS10070;Name=yedF;gbkey=Gene;gene=yedF;gene_biotype=protein_coding;locus_tag=IY40_RS10070;old_locus_tag=IY40_10230 NZ_JPQY01000013.1 Protein Homology CDS 61603 61842 . - 0 ID=cds-WP_004933486.1;Parent=gene-IY40_RS10070;Dbxref=GenBank:WP_004933486.1;Name=WP_004933486.1;gbkey=CDS;gene=yedF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004955893.1;locus_tag=IY40_RS10070;product=sulfurtransferase-like selenium metabolism protein YedF;protein_id=WP_004933486.1;transl_table=11 NZ_JPQY01000013.1 RefSeq gene 61839 63053 . - . ID=gene-IY40_RS10075;Name=yedE;gbkey=Gene;gene=yedE;gene_biotype=protein_coding;locus_tag=IY40_RS10075;old_locus_tag=IY40_10235 NZ_JPQY01000013.1 Protein Homology CDS 61839 63053 . - 0 ID=cds-WP_043139259.1;Parent=gene-IY40_RS10075;Dbxref=GenBank:WP_043139259.1;Name=WP_043139259.1;gbkey=CDS;gene=yedE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013811280.1;locus_tag=IY40_RS10075;product=selenium metabolism membrane protein YedE/FdhT;protein_id=WP_043139259.1;transl_table=11 NZ_JPQY01000013.1 RefSeq gene 63200 65137 . - . ID=gene-IY40_RS10080;Name=IY40_RS10080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS10080;old_locus_tag=IY40_10240 NZ_JPQY01000013.1 Protein Homology CDS 63200 65137 . - 0 ID=cds-WP_025305057.1;Parent=gene-IY40_RS10080;Dbxref=GenBank:WP_025305057.1;Name=WP_025305057.1;Ontology_term=GO:0000027,GO:0003724,GO:0005524;gbkey=CDS;go_function=RNA helicase activity|0003724||IEA,ATP binding|0005524||IEA;go_process=ribosomal large subunit assembly|0000027||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209261.1;locus_tag=IY40_RS10080;product=DEAD/DEAH family ATP-dependent RNA helicase;protein_id=WP_025305057.1;transl_table=11 NZ_JPQY01000013.1 RefSeq gene 65127 65207 . - . ID=gene-IY40_RS26675;Name=yrbN;gbkey=Gene;gene=yrbN;gene_biotype=protein_coding;locus_tag=IY40_RS26675 NZ_JPQY01000013.1 Protein Homology CDS 65127 65207 . - 0 ID=cds-WP_099032700.1;Parent=gene-IY40_RS26675;Dbxref=GenBank:WP_099032700.1;Name=WP_099032700.1;gbkey=CDS;gene=yrbN;inference=COORDINATES: protein motif:HMM:NF033440.0;locus_tag=IY40_RS26675;product=protein YrbN;protein_id=WP_099032700.1;transl_table=11 NZ_JPQY01000013.1 RefSeq gene 65324 66208 . - . ID=gene-IY40_RS10085;Name=nlpI;gbkey=Gene;gene=nlpI;gene_biotype=protein_coding;locus_tag=IY40_RS10085;old_locus_tag=IY40_10245 NZ_JPQY01000013.1 Protein Homology CDS 65324 66208 . - 0 ID=cds-WP_025305056.1;Parent=gene-IY40_RS10085;Dbxref=GenBank:WP_025305056.1;Name=WP_025305056.1;Ontology_term=GO:0005515;gbkey=CDS;gene=nlpI;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020802045.1;locus_tag=IY40_RS10085;product=lipoprotein NlpI;protein_id=WP_025305056.1;transl_table=11 NZ_JPQY01000013.1 RefSeq gene 66337 68454 . - . ID=gene-IY40_RS10090;Name=pnp;gbkey=Gene;gene=pnp;gene_biotype=protein_coding;locus_tag=IY40_RS10090;old_locus_tag=IY40_10250 NZ_JPQY01000013.1 Protein Homology CDS 66337 68454 . - 0 ID=cds-WP_025305055.1;Parent=gene-IY40_RS10090;Dbxref=GenBank:WP_025305055.1;Name=WP_025305055.1;Ontology_term=GO:0006402,GO:0003723,GO:0004654;gbkey=CDS;gene=pnp;go_function=RNA binding|0003723||IEA,polyribonucleotide nucleotidyltransferase activity|0004654||IEA;go_process=mRNA catabolic process|0006402||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002228303.1;locus_tag=IY40_RS10090;product=polyribonucleotide nucleotidyltransferase;protein_id=WP_025305055.1;transl_table=11 NZ_JPQY01000013.1 RefSeq gene 68711 68980 . - . ID=gene-IY40_RS10095;Name=rpsO;gbkey=Gene;gene=rpsO;gene_biotype=protein_coding;locus_tag=IY40_RS10095;old_locus_tag=IY40_10255 NZ_JPQY01000013.1 Protein Homology CDS 68711 68980 . - 0 ID=cds-WP_004933502.1;Parent=gene-IY40_RS10095;Dbxref=GenBank:WP_004933502.1;Name=WP_004933502.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsO;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004933502.1;locus_tag=IY40_RS10095;product=30S ribosomal protein S15;protein_id=WP_004933502.1;transl_table=11 NZ_JPQY01000013.1 RefSeq gene 69105 70049 . - . ID=gene-IY40_RS10100;Name=truB;gbkey=Gene;gene=truB;gene_biotype=protein_coding;locus_tag=IY40_RS10100;old_locus_tag=IY40_10260 NZ_JPQY01000013.1 Protein Homology CDS 69105 70049 . - 0 ID=cds-WP_025305054.1;Parent=gene-IY40_RS10100;Dbxref=GenBank:WP_025305054.1;Name=WP_025305054.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;gene=truB;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012004949.1;locus_tag=IY40_RS10100;product=tRNA pseudouridine(55) synthase TruB;protein_id=WP_025305054.1;transl_table=11 NZ_JPQY01000013.1 RefSeq gene 70049 70459 . - . ID=gene-IY40_RS10105;Name=rbfA;gbkey=Gene;gene=rbfA;gene_biotype=protein_coding;locus_tag=IY40_RS10105;old_locus_tag=IY40_10265 NZ_JPQY01000013.1 Protein Homology CDS 70049 70459 . - 0 ID=cds-WP_004933508.1;Parent=gene-IY40_RS10105;Dbxref=GenBank:WP_004933508.1;Name=WP_004933508.1;Ontology_term=GO:0006364;gbkey=CDS;gene=rbfA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012773289.1;locus_tag=IY40_RS10105;product=30S ribosome-binding factor RbfA;protein_id=WP_004933508.1;transl_table=11 NZ_JPQY01000013.1 RefSeq gene 70530 73217 . - . ID=gene-IY40_RS10110;Name=infB;gbkey=Gene;gene=infB;gene_biotype=protein_coding;locus_tag=IY40_RS10110;old_locus_tag=IY40_10270 NZ_JPQY01000013.1 Protein Homology CDS 70530 73217 . - 0 ID=cds-WP_004933511.1;Parent=gene-IY40_RS10110;Dbxref=GenBank:WP_004933511.1;Name=WP_004933511.1;Ontology_term=GO:0006413,GO:0003743,GO:0003924,GO:0005525,GO:0005737;gbkey=CDS;gene=infB;go_component=cytoplasm|0005737||IEA;go_function=translation initiation factor activity|0003743||IEA,GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004952860.1;locus_tag=IY40_RS10110;product=translation initiation factor IF-2;protein_id=WP_004933511.1;transl_table=11 NZ_JPQY01000013.1 RefSeq gene 73241 74749 . - . ID=gene-IY40_RS10115;Name=nusA;gbkey=Gene;gene=nusA;gene_biotype=protein_coding;locus_tag=IY40_RS10115;old_locus_tag=IY40_10275 NZ_JPQY01000013.1 Protein Homology CDS 73241 74749 . - 0 ID=cds-WP_043139262.1;Parent=gene-IY40_RS10115;Dbxref=GenBank:WP_043139262.1;Name=WP_043139262.1;Ontology_term=GO:0006353,GO:0003723;gbkey=CDS;gene=nusA;go_function=RNA binding|0003723||IEA;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005131833.1;locus_tag=IY40_RS10115;product=transcription termination factor NusA;protein_id=WP_043139262.1;transl_table=11 NZ_JPQY01000013.1 RefSeq gene 74771 75223 . - . ID=gene-IY40_RS10120;Name=rimP;gbkey=Gene;gene=rimP;gene_biotype=protein_coding;locus_tag=IY40_RS10120;old_locus_tag=IY40_10280 NZ_JPQY01000013.1 Protein Homology CDS 74771 75223 . - 0 ID=cds-WP_004933515.1;Parent=gene-IY40_RS10120;Dbxref=GenBank:WP_004933515.1;Name=WP_004933515.1;Ontology_term=GO:0042274;gbkey=CDS;gene=rimP;go_process=ribosomal small subunit biogenesis|0042274||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004125659.1;locus_tag=IY40_RS10120;product=ribosome maturation factor RimP;protein_id=WP_004933515.1;transl_table=11 NZ_JPQY01000013.1 RefSeq gene 75441 75517 . - . ID=gene-IY40_RS10125;Name=IY40_RS10125;gbkey=Gene;gene_biotype=tRNA;locus_tag=IY40_RS10125;old_locus_tag=IY40_10285 NZ_JPQY01000013.1 tRNAscan-SE tRNA 75441 75517 . - . ID=rna-IY40_RS10125;Parent=gene-IY40_RS10125;anticodon=(pos:complement(75481..75483));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=IY40_RS10125;product=tRNA-Met NZ_JPQY01000013.1 tRNAscan-SE exon 75441 75517 . - . ID=exon-IY40_RS10125-1;Parent=rna-IY40_RS10125;anticodon=(pos:complement(75481..75483));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=IY40_RS10125;product=tRNA-Met NZ_JPQY01000013.1 RefSeq gene 75578 75664 . - . ID=gene-IY40_RS10130;Name=IY40_RS10130;gbkey=Gene;gene_biotype=tRNA;locus_tag=IY40_RS10130;old_locus_tag=IY40_10290 NZ_JPQY01000013.1 tRNAscan-SE tRNA 75578 75664 . - . ID=rna-IY40_RS10130;Parent=gene-IY40_RS10130;anticodon=(pos:complement(75628..75630));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=IY40_RS10130;product=tRNA-Leu NZ_JPQY01000013.1 tRNAscan-SE exon 75578 75664 . - . ID=exon-IY40_RS10130-1;Parent=rna-IY40_RS10130;anticodon=(pos:complement(75628..75630));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=IY40_RS10130;product=tRNA-Leu NZ_JPQY01000013.1 RefSeq gene 75734 76069 . - . ID=gene-IY40_RS10135;Name=secG;gbkey=Gene;gene=secG;gene_biotype=protein_coding;locus_tag=IY40_RS10135;old_locus_tag=IY40_10295 NZ_JPQY01000013.1 Protein Homology CDS 75734 76069 . - 0 ID=cds-WP_004933519.1;Parent=gene-IY40_RS10135;Dbxref=GenBank:WP_004933519.1;Name=WP_004933519.1;Ontology_term=GO:0015739,GO:0015136,GO:0016020;gbkey=CDS;gene=secG;go_component=membrane|0016020||IEA;go_function=sialic acid transmembrane transporter activity|0015136||IEA;go_process=sialic acid transport|0015739||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312081.1;locus_tag=IY40_RS10135;product=preprotein translocase subunit SecG;protein_id=WP_004933519.1;transl_table=11 NZ_JPQY01000013.1 RefSeq gene 76290 77627 . - . ID=gene-IY40_RS10140;Name=glmM;gbkey=Gene;gene=glmM;gene_biotype=protein_coding;locus_tag=IY40_RS10140;old_locus_tag=IY40_10300 NZ_JPQY01000013.1 Protein Homology CDS 76290 77627 . - 0 ID=cds-WP_025305053.1;Parent=gene-IY40_RS10140;Dbxref=GenBank:WP_025305053.1;Name=WP_025305053.1;Ontology_term=GO:0005975,GO:0000287,GO:0008966,GO:0016868;gbkey=CDS;gene=glmM;go_function=magnesium ion binding|0000287||IEA,phosphoglucosamine mutase activity|0008966||IEA,intramolecular phosphotransferase activity|0016868||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011148609.1;locus_tag=IY40_RS10140;product=phosphoglucosamine mutase;protein_id=WP_025305053.1;transl_table=11 NZ_JPQY01000013.1 RefSeq gene 77632 78468 . - . ID=gene-IY40_RS10145;Name=folP;gbkey=Gene;gene=folP;gene_biotype=protein_coding;locus_tag=IY40_RS10145;old_locus_tag=IY40_10305 NZ_JPQY01000013.1 Protein Homology CDS 77632 78468 . - 0 ID=cds-WP_043139266.1;Parent=gene-IY40_RS10145;Dbxref=GenBank:WP_043139266.1;Name=WP_043139266.1;Ontology_term=GO:0004156;gbkey=CDS;gene=folP;go_function=dihydropteroate synthase activity|0004156||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016929326.1;locus_tag=IY40_RS10145;product=dihydropteroate synthase;protein_id=WP_043139266.1;transl_table=11 NZ_JPQY01000013.1 RefSeq gene 78561 80492 . - . ID=gene-IY40_RS10150;Name=ftsH;gbkey=Gene;gene=ftsH;gene_biotype=protein_coding;locus_tag=IY40_RS10150;old_locus_tag=IY40_10310 NZ_JPQY01000013.1 Protein Homology CDS 78561 80492 . - 0 ID=cds-WP_004933529.1;Parent=gene-IY40_RS10150;Dbxref=GenBank:WP_004933529.1;Name=WP_004933529.1;Ontology_term=GO:0006508,GO:0004176,GO:0004222;gbkey=CDS;gene=ftsH;go_function=ATP-dependent peptidase activity|0004176||IEA,metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017349625.1;locus_tag=IY40_RS10150;product=ATP-dependent zinc metalloprotease FtsH;protein_id=WP_004933529.1;transl_table=11 NZ_JPQY01000013.1 RefSeq gene 80549 81178 . - . ID=gene-IY40_RS10155;Name=rlmE;gbkey=Gene;gene=rlmE;gene_biotype=protein_coding;locus_tag=IY40_RS10155;old_locus_tag=IY40_10315 NZ_JPQY01000013.1 Protein Homology CDS 80549 81178 . - 0 ID=cds-WP_004933533.1;Parent=gene-IY40_RS10155;Dbxref=GenBank:WP_004933533.1;Name=WP_004933533.1;Ontology_term=GO:0001510,GO:0006364,GO:0016436;gbkey=CDS;gene=rlmE;go_function=rRNA (uridine) methyltransferase activity|0016436||IEA;go_process=RNA methylation|0001510||IEA,rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005156285.1;locus_tag=IY40_RS10155;product=23S rRNA (uridine(2552)-2'-O)-methyltransferase RlmE;protein_id=WP_004933533.1;transl_table=11 NZ_JPQY01000013.1 RefSeq gene 81322 81615 . + . ID=gene-IY40_RS10160;Name=yhbY;gbkey=Gene;gene=yhbY;gene_biotype=protein_coding;locus_tag=IY40_RS10160;old_locus_tag=IY40_10320 NZ_JPQY01000013.1 Protein Homology CDS 81322 81615 . + 0 ID=cds-WP_004933536.1;Parent=gene-IY40_RS10160;Dbxref=GenBank:WP_004933536.1;Name=WP_004933536.1;gbkey=CDS;gene=yhbY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014833438.1;locus_tag=IY40_RS10160;product=ribosome assembly RNA-binding protein YhbY;protein_id=WP_004933536.1;transl_table=11 NZ_JPQY01000013.1 RefSeq gene 81728 82204 . - . ID=gene-IY40_RS10165;Name=greA;gbkey=Gene;gene=greA;gene_biotype=protein_coding;locus_tag=IY40_RS10165;old_locus_tag=IY40_10325 NZ_JPQY01000013.1 Protein Homology CDS 81728 82204 . - 0 ID=cds-WP_025305051.1;Parent=gene-IY40_RS10165;Dbxref=GenBank:WP_025305051.1;Name=WP_025305051.1;Ontology_term=GO:0032784,GO:0003677,GO:0070063;gbkey=CDS;gene=greA;go_function=DNA binding|0003677||IEA,RNA polymerase binding|0070063||IEA;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006178768.1;locus_tag=IY40_RS10165;product=transcription elongation factor GreA;protein_id=WP_025305051.1;transl_table=11 NZ_JPQY01000013.1 RefSeq gene 82461 83894 . + . ID=gene-IY40_RS10170;Name=dacB;gbkey=Gene;gene=dacB;gene_biotype=protein_coding;locus_tag=IY40_RS10170;old_locus_tag=IY40_10330 NZ_JPQY01000013.1 Protein Homology CDS 82461 83894 . + 0 ID=cds-WP_043139270.1;Parent=gene-IY40_RS10170;Dbxref=GenBank:WP_043139270.1;Name=WP_043139270.1;Ontology_term=GO:0006508,GO:0004185;gbkey=CDS;gene=dacB;go_function=serine-type carboxypeptidase activity|0004185||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004720377.1;locus_tag=IY40_RS10170;product=serine-type D-Ala-D-Ala carboxypeptidase;protein_id=WP_043139270.1;transl_table=11 NZ_JPQY01000013.1 RefSeq gene 83903 84565 . + . ID=gene-IY40_RS10175;Name=pmrA;gbkey=Gene;gene=pmrA;gene_biotype=protein_coding;locus_tag=IY40_RS10175;old_locus_tag=IY40_10335 NZ_JPQY01000013.1 Protein Homology CDS 83903 84565 . + 0 ID=cds-WP_025305049.1;Parent=gene-IY40_RS10175;Dbxref=GenBank:WP_025305049.1;Name=WP_025305049.1;gbkey=CDS;gene=pmrA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210183.1;locus_tag=IY40_RS10175;product=two-component system response regulator PmrA;protein_id=WP_025305049.1;transl_table=11 NZ_JPQY01000013.1 RefSeq gene 84562 85623 . + . ID=gene-IY40_RS10180;Name=pmrB;gbkey=Gene;gene=pmrB;gene_biotype=protein_coding;locus_tag=IY40_RS10180;old_locus_tag=IY40_10340 NZ_JPQY01000013.1 Protein Homology CDS 84562 85623 . + 0 ID=cds-WP_025305048.1;Parent=gene-IY40_RS10180;Dbxref=GenBank:WP_025305048.1;Name=WP_025305048.1;gbkey=CDS;gene=pmrB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015376409.1;locus_tag=IY40_RS10180;product=two-component system sensor histidine kinase PmrB;protein_id=WP_025305048.1;transl_table=11 NZ_JPQY01000013.1 RefSeq gene 85660 86832 . - . ID=gene-IY40_RS10185;Name=cgtA;gbkey=Gene;gene=cgtA;gene_biotype=protein_coding;locus_tag=IY40_RS10185;old_locus_tag=IY40_10345 NZ_JPQY01000013.1 Protein Homology CDS 85660 86832 . - 0 ID=cds-WP_025305047.1;Parent=gene-IY40_RS10185;Dbxref=GenBank:WP_025305047.1;Name=WP_025305047.1;Ontology_term=GO:0000287,GO:0003924,GO:0005525;gbkey=CDS;gene=cgtA;go_function=magnesium ion binding|0000287||IEA,GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011092306.1;locus_tag=IY40_RS10185;product=Obg family GTPase CgtA;protein_id=WP_025305047.1;transl_table=11 NZ_JPQY01000013.1 RefSeq gene 86849 87820 . - . ID=gene-IY40_RS10190;Name=IY40_RS10190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS10190;old_locus_tag=IY40_10350 NZ_JPQY01000013.1 Protein Homology CDS 86849 87820 . - 0 ID=cds-WP_043139276.1;Parent=gene-IY40_RS10190;Dbxref=GenBank:WP_043139276.1;Name=WP_043139276.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004933556.1;locus_tag=IY40_RS10190;product=DMT family transporter;protein_id=WP_043139276.1;transl_table=11 NZ_JPQY01000013.1 RefSeq gene 87926 88183 . - . ID=gene-IY40_RS10195;Name=rpmA;gbkey=Gene;gene=rpmA;gene_biotype=protein_coding;locus_tag=IY40_RS10195;old_locus_tag=IY40_10355 NZ_JPQY01000013.1 Protein Homology CDS 87926 88183 . - 0 ID=cds-WP_004933559.1;Parent=gene-IY40_RS10195;Dbxref=GenBank:WP_004933559.1;Name=WP_004933559.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmA;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004933559.1;locus_tag=IY40_RS10195;product=50S ribosomal protein L27;protein_id=WP_004933559.1;transl_table=11 NZ_JPQY01000013.1 RefSeq gene 88201 88512 . - . ID=gene-IY40_RS10200;Name=rplU;gbkey=Gene;gene=rplU;gene_biotype=protein_coding;locus_tag=IY40_RS10200;old_locus_tag=IY40_10360 NZ_JPQY01000013.1 Protein Homology CDS 88201 88512 . - 0 ID=cds-WP_004933561.1;Parent=gene-IY40_RS10200;Dbxref=GenBank:WP_004933561.1;Name=WP_004933561.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rplU;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015960603.1;locus_tag=IY40_RS10200;product=50S ribosomal protein L21;protein_id=WP_004933561.1;transl_table=11 NZ_JPQY01000013.1 RefSeq gene 88783 89754 . + . ID=gene-IY40_RS10205;Name=ispB;gbkey=Gene;gene=ispB;gene_biotype=protein_coding;locus_tag=IY40_RS10205;old_locus_tag=IY40_10365 NZ_JPQY01000013.1 Protein Homology CDS 88783 89754 . + 0 ID=cds-WP_025305045.1;Parent=gene-IY40_RS10205;Dbxref=GenBank:WP_025305045.1;Name=WP_025305045.1;Ontology_term=GO:0008299;gbkey=CDS;gene=ispB;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016943771.1;locus_tag=IY40_RS10205;product=octaprenyl diphosphate synthase;protein_id=WP_025305045.1;transl_table=11 NZ_JPQY01000013.1 RefSeq gene 89805 90161 . - . ID=gene-IY40_RS10210;Name=IY40_RS10210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS10210;old_locus_tag=IY40_10370 NZ_JPQY01000013.1 Protein Homology CDS 89805 90161 . - 0 ID=cds-WP_025305044.1;Parent=gene-IY40_RS10210;Dbxref=GenBank:WP_025305044.1;Name=WP_025305044.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015376406.1;locus_tag=IY40_RS10210;product=DNA-binding protein;protein_id=WP_025305044.1;transl_table=11 NZ_JPQY01000013.1 RefSeq gene 90342 90602 . + . ID=gene-IY40_RS10215;Name=IY40_RS10215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS10215;old_locus_tag=IY40_10375 NZ_JPQY01000013.1 Protein Homology CDS 90342 90602 . + 0 ID=cds-WP_004933567.1;Parent=gene-IY40_RS10215;Dbxref=GenBank:WP_004933567.1;Name=WP_004933567.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004933567.1;locus_tag=IY40_RS10215;product=helix-turn-helix domain-containing protein;protein_id=WP_004933567.1;transl_table=11 NZ_JPQY01000013.1 RefSeq gene 90670 91608 . - . ID=gene-IY40_RS10220;Name=mdh;gbkey=Gene;gene=mdh;gene_biotype=protein_coding;locus_tag=IY40_RS10220;old_locus_tag=IY40_10380 NZ_JPQY01000013.1 Protein Homology CDS 90670 91608 . - 0 ID=cds-WP_004933569.1;Parent=gene-IY40_RS10220;Dbxref=GenBank:WP_004933569.1;Name=WP_004933569.1;Ontology_term=GO:0006099,GO:0030060;gbkey=CDS;gene=mdh;go_function=L-malate dehydrogenase (NAD+) activity|0030060||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016159489.1;locus_tag=IY40_RS10220;product=malate dehydrogenase;protein_id=WP_004933569.1;transl_table=11 NZ_JPQY01000013.1 RefSeq gene 92073 92543 . + . ID=gene-IY40_RS10225;Name=argR;gbkey=Gene;gene=argR;gene_biotype=protein_coding;locus_tag=IY40_RS10225;old_locus_tag=IY40_10385 NZ_JPQY01000013.1 Protein Homology CDS 92073 92543 . + 0 ID=cds-WP_016929335.1;Parent=gene-IY40_RS10225;Dbxref=GenBank:WP_016929335.1;Name=WP_016929335.1;gbkey=CDS;gene=argR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210173.1;locus_tag=IY40_RS10225;product=transcriptional regulator ArgR;protein_id=WP_016929335.1;transl_table=11 NZ_JPQY01000013.1 RefSeq gene 92947 93210 . + . ID=gene-IY40_RS10230;Name=yhcN;gbkey=Gene;gene=yhcN;gene_biotype=protein_coding;locus_tag=IY40_RS10230;old_locus_tag=IY40_10390 NZ_JPQY01000013.1 Protein Homology CDS 92947 93210 . + 0 ID=cds-WP_025305043.1;Parent=gene-IY40_RS10230;Dbxref=GenBank:WP_025305043.1;Name=WP_025305043.1;gbkey=CDS;gene=yhcN;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012004928.1;locus_tag=IY40_RS10230;product=peroxide/acid stress response protein YhcN;protein_id=WP_025305043.1;transl_table=11 NZ_JPQY01000013.1 RefSeq gene 93331 93594 . + . ID=gene-IY40_RS10235;Name=yhcN;gbkey=Gene;gene=yhcN;gene_biotype=protein_coding;locus_tag=IY40_RS10235;old_locus_tag=IY40_10395 NZ_JPQY01000013.1 Protein Homology CDS 93331 93594 . + 0 ID=cds-WP_025305042.1;Parent=gene-IY40_RS10235;Dbxref=GenBank:WP_025305042.1;Name=WP_025305042.1;gbkey=CDS;gene=yhcN;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012004928.1;locus_tag=IY40_RS10235;product=peroxide/acid stress response protein YhcN;protein_id=WP_025305042.1;transl_table=11 NZ_JPQY01000013.1 RefSeq gene 93792 95171 . - . ID=gene-IY40_RS10240;Name=mpl;gbkey=Gene;gene=mpl;gene_biotype=protein_coding;locus_tag=IY40_RS10240;old_locus_tag=IY40_10400 NZ_JPQY01000013.1 Protein Homology CDS 93792 95171 . - 0 ID=cds-WP_033636810.1;Parent=gene-IY40_RS10240;Dbxref=GenBank:WP_033636810.1;Name=WP_033636810.1;Ontology_term=GO:0009252,GO:0071555,GO:0016881;gbkey=CDS;gene=mpl;go_function=acid-amino acid ligase activity|0016881||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016929338.1;locus_tag=IY40_RS10240;product=UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase;protein_id=WP_033636810.1;transl_table=11 NZ_JPQY01000013.1 RefSeq gene 95341 96345 . + . ID=gene-IY40_RS10245;Name=fbp;gbkey=Gene;gene=fbp;gene_biotype=protein_coding;locus_tag=IY40_RS10245;old_locus_tag=IY40_10405 NZ_JPQY01000013.1 Protein Homology CDS 95341 96345 . + 0 ID=cds-WP_004933587.1;Parent=gene-IY40_RS10245;Dbxref=GenBank:WP_004933587.1;Name=WP_004933587.1;Ontology_term=GO:0005975,GO:0042132;gbkey=CDS;gene=fbp;go_function=fructose 1%2C6-bisphosphate 1-phosphatase activity|0042132||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004933587.1;locus_tag=IY40_RS10245;product=class 1 fructose-bisphosphatase;protein_id=WP_004933587.1;transl_table=11 NZ_JPQY01000013.1 RefSeq gene 96391 97944 . - . ID=gene-IY40_RS10250;Name=IY40_RS10250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS10250;old_locus_tag=IY40_10410 NZ_JPQY01000013.1 Protein Homology CDS 96391 97944 . - 0 ID=cds-WP_025305040.1;Parent=gene-IY40_RS10250;Dbxref=GenBank:WP_025305040.1;Name=WP_025305040.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004933589.1;locus_tag=IY40_RS10250;product=methyl-accepting chemotaxis protein;protein_id=WP_025305040.1;transl_table=11 NZ_JPQY01000013.1 RefSeq gene 98206 98736 . + . ID=gene-IY40_RS10255;Name=ppa;gbkey=Gene;gene=ppa;gene_biotype=protein_coding;locus_tag=IY40_RS10255;old_locus_tag=IY40_10415 NZ_JPQY01000013.1 Protein Homology CDS 98206 98736 . + 0 ID=cds-WP_004933594.1;Parent=gene-IY40_RS10255;Dbxref=GenBank:WP_004933594.1;Name=WP_004933594.1;Ontology_term=GO:0006796,GO:0004427;gbkey=CDS;gene=ppa;go_function=inorganic diphosphate phosphatase activity|0004427||IEA;go_process=phosphate-containing compound metabolic process|0006796||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001739810.1;locus_tag=IY40_RS10255;product=inorganic diphosphatase;protein_id=WP_004933594.1;transl_table=11 NZ_JPQY01000013.1 RefSeq gene 98790 99137 . - . ID=gene-IY40_RS10260;Name=IY40_RS10260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS10260;old_locus_tag=IY40_10420 NZ_JPQY01000013.1 Protein Homology CDS 98790 99137 . - 0 ID=cds-WP_025159589.1;Parent=gene-IY40_RS10260;Dbxref=GenBank:WP_025159589.1;Name=WP_025159589.1;Ontology_term=GO:0061929;gbkey=CDS;go_function=gamma-glutamylaminecyclotransferase activity|0061929||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004952785.1;locus_tag=IY40_RS10260;product=gamma-glutamylcyclotransferase family protein;protein_id=WP_025159589.1;transl_table=11 NZ_JPQY01000013.1 RefSeq gene 99140 102958 . - . ID=gene-IY40_RS10265;Name=tamB;gbkey=Gene;gene=tamB;gene_biotype=protein_coding;locus_tag=IY40_RS10265;old_locus_tag=IY40_10425 NZ_JPQY01000013.1 Protein Homology CDS 99140 102958 . - 0 ID=cds-WP_043139281.1;Parent=gene-IY40_RS10265;Dbxref=GenBank:WP_043139281.1;Name=WP_043139281.1;Ontology_term=GO:0009306,GO:0089705;gbkey=CDS;gene=tamB;go_process=protein secretion|0009306||IEA,protein localization to outer membrane|0089705||IEA;inference=COORDINATES: protein motif:HMM:NF047952.2;locus_tag=IY40_RS10265;product=autotransporter assembly complex protein TamB;protein_id=WP_043139281.1;transl_table=11 NZ_JPQY01000013.1 RefSeq gene 102955 104673 . - . ID=gene-IY40_RS10270;Name=tamA;gbkey=Gene;gene=tamA;gene_biotype=protein_coding;locus_tag=IY40_RS10270;old_locus_tag=IY40_10430 NZ_JPQY01000013.1 Protein Homology CDS 102955 104673 . - 0 ID=cds-WP_169540592.1;Parent=gene-IY40_RS10270;Dbxref=GenBank:WP_169540592.1;Name=WP_169540592.1;Ontology_term=GO:0009306,GO:0089705;gbkey=CDS;gene=tamA;go_process=protein secretion|0009306||IEA,protein localization to outer membrane|0089705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015368591.1;locus_tag=IY40_RS10270;product=autotransporter assembly complex protein TamA;protein_id=WP_169540592.1;transl_table=11 NZ_JPQY01000013.1 RefSeq gene 104978 105619 . + . ID=gene-IY40_RS10275;Name=msrA;gbkey=Gene;gene=msrA;gene_biotype=protein_coding;locus_tag=IY40_RS10275;old_locus_tag=IY40_10435 NZ_JPQY01000013.1 Protein Homology CDS 104978 105619 . + 0 ID=cds-WP_043139288.1;Parent=gene-IY40_RS10275;Dbxref=GenBank:WP_043139288.1;Name=WP_043139288.1;Ontology_term=GO:0006979,GO:0030091,GO:0008113,GO:0033744;gbkey=CDS;gene=msrA;go_function=peptide-methionine (S)-S-oxide reductase activity|0008113||IEA,L-methionine (S)-S-oxide reductase activity|0033744||IEA;go_process=response to oxidative stress|0006979||IEA,protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013811260.1;locus_tag=IY40_RS10275;product=peptide-methionine (S)-S-oxide reductase MsrA;protein_id=WP_043139288.1;transl_table=11 NZ_JPQY01000013.1 RefSeq gene 105800 107131 . + . ID=gene-IY40_RS10280;Name=IY40_RS10280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS10280;old_locus_tag=IY40_10440 NZ_JPQY01000013.1 Protein Homology CDS 105800 107131 . + 0 ID=cds-WP_004933603.1;Parent=gene-IY40_RS10280;Dbxref=GenBank:WP_004933603.1;Name=WP_004933603.1;Ontology_term=GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012230150.1;locus_tag=IY40_RS10280;product=polyamine export protein PaeA;protein_id=WP_004933603.1;transl_table=11 NZ_JPQY01000013.1 RefSeq gene 107201 107407 . - . ID=gene-IY40_RS10285;Name=IY40_RS10285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS10285;old_locus_tag=IY40_10445 NZ_JPQY01000013.1 Protein Homology CDS 107201 107407 . - 0 ID=cds-WP_004933604.1;Parent=gene-IY40_RS10285;Dbxref=GenBank:WP_004933604.1;Name=WP_004933604.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015670582.1;locus_tag=IY40_RS10285;product=DUF1107 domain-containing protein;protein_id=WP_004933604.1;transl_table=11 NZ_JPQY01000013.1 RefSeq gene 107738 108295 . + . ID=gene-IY40_RS10290;Name=IY40_RS10290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS10290;old_locus_tag=IY40_10450 NZ_JPQY01000013.1 Protein Homology CDS 107738 108295 . + 0 ID=cds-WP_025305036.1;Parent=gene-IY40_RS10290;Dbxref=GenBank:WP_025305036.1;Name=WP_025305036.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017891370.1;locus_tag=IY40_RS10290;product=YtfJ family protein;protein_id=WP_025305036.1;transl_table=11 NZ_JPQY01000013.1 RefSeq gene 108297 109037 . - . ID=gene-IY40_RS10295;Name=cysQ;gbkey=Gene;gene=cysQ;gene_biotype=protein_coding;locus_tag=IY40_RS10295;old_locus_tag=IY40_10455 NZ_JPQY01000013.1 Protein Homology CDS 108297 109037 . - 0 ID=cds-WP_033644177.1;Parent=gene-IY40_RS10295;Dbxref=GenBank:WP_033644177.1;Name=WP_033644177.1;Ontology_term=GO:0000287,GO:0008441;gbkey=CDS;gene=cysQ;go_function=magnesium ion binding|0000287||IEA,3'(2')%2C5'-bisphosphate nucleotidase activity|0008441||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002220539.1;locus_tag=IY40_RS10295;product=3'(2')%2C5'-bisphosphate nucleotidase CysQ;protein_id=WP_033644177.1;transl_table=11 NZ_JPQY01000013.1 RefSeq gene 109293 111245 . + . ID=gene-IY40_RS10300;Name=IY40_RS10300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS10300;old_locus_tag=IY40_10460 NZ_JPQY01000013.1 Protein Homology CDS 109293 111245 . + 0 ID=cds-WP_043139292.1;Parent=gene-IY40_RS10300;Dbxref=GenBank:WP_043139292.1;Name=WP_043139292.1;Ontology_term=GO:0009166,GO:0000166,GO:0008663,GO:0016788;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,2'%2C3'-cyclic-nucleotide 2'-phosphodiesterase activity|0008663||IEA,hydrolase activity%2C acting on ester bonds|0016788||IEA;go_process=nucleotide catabolic process|0009166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004952766.1;locus_tag=IY40_RS10300;product=bifunctional 2'%2C3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase;protein_id=WP_043139292.1;transl_table=11 NZ_JPQY01000013.1 RefSeq gene 111359 112024 . + . ID=gene-IY40_RS10305;Name=ytfE;gbkey=Gene;gene=ytfE;gene_biotype=protein_coding;locus_tag=IY40_RS10305;old_locus_tag=IY40_10465 NZ_JPQY01000013.1 Protein Homology CDS 111359 112024 . + 0 ID=cds-WP_025305034.1;Parent=gene-IY40_RS10305;Dbxref=GenBank:WP_025305034.1;Name=WP_025305034.1;gbkey=CDS;gene=ytfE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006323247.1;locus_tag=IY40_RS10305;product=iron-sulfur cluster repair protein YtfE;protein_id=WP_025305034.1;transl_table=11 NZ_JPQY01000013.1 RefSeq gene 112068 112688 . - . ID=gene-IY40_RS10310;Name=fklB;gbkey=Gene;gene=fklB;gene_biotype=protein_coding;locus_tag=IY40_RS10310;old_locus_tag=IY40_10470 NZ_JPQY01000013.1 Protein Homology CDS 112068 112688 . - 0 ID=cds-WP_004933618.1;Parent=gene-IY40_RS10310;Dbxref=GenBank:WP_004933618.1;Name=WP_004933618.1;gbkey=CDS;gene=fklB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015742582.1;locus_tag=IY40_RS10310;product=FKBP-type peptidyl-prolyl cis-trans isomerase;protein_id=WP_004933618.1;transl_table=11 NZ_JPQY01000013.1 RefSeq gene 112956 113627 . + . ID=gene-IY40_RS10315;Name=IY40_RS10315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS10315;old_locus_tag=IY40_10475 NZ_JPQY01000013.1 Protein Homology CDS 112956 113627 . + 0 ID=cds-WP_043139295.1;Parent=gene-IY40_RS10315;Dbxref=GenBank:WP_043139295.1;Name=WP_043139295.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015376399.1;locus_tag=IY40_RS10315;product=OapA family protein;protein_id=WP_043139295.1;transl_table=11 NZ_JPQY01000013.1 RefSeq gene 113631 113984 . - . ID=gene-IY40_RS10320;Name=IY40_RS10320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS10320;old_locus_tag=IY40_10480 NZ_JPQY01000013.1 Protein Homology CDS 113631 113984 . - 0 ID=cds-WP_025305032.1;Parent=gene-IY40_RS10320;Dbxref=GenBank:WP_025305032.1;Name=WP_025305032.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016929349.1;locus_tag=IY40_RS10320;product=DUF488 domain-containing protein;protein_id=WP_025305032.1;transl_table=11 NZ_JPQY01000013.1 RefSeq gene 114096 114548 . - . ID=gene-IY40_RS10325;Name=rplI;gbkey=Gene;gene=rplI;gene_biotype=protein_coding;locus_tag=IY40_RS10325;old_locus_tag=IY40_10485 NZ_JPQY01000013.1 Protein Homology CDS 114096 114548 . - 0 ID=cds-WP_004933629.1;Parent=gene-IY40_RS10325;Dbxref=GenBank:WP_004933629.1;Name=WP_004933629.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplI;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004699845.1;locus_tag=IY40_RS10325;product=50S ribosomal protein L9;protein_id=WP_004933629.1;transl_table=11 NZ_JPQY01000013.1 RefSeq gene 114588 114815 . - . ID=gene-IY40_RS10330;Name=rpsR;gbkey=Gene;gene=rpsR;gene_biotype=protein_coding;locus_tag=IY40_RS10330;old_locus_tag=IY40_10490 NZ_JPQY01000013.1 Protein Homology CDS 114588 114815 . - 0 ID=cds-WP_000135199.1;Parent=gene-IY40_RS10330;Dbxref=GenBank:WP_000135199.1;Name=WP_000135199.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsR;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012986941.1;locus_tag=IY40_RS10330;product=30S ribosomal protein S18;protein_id=WP_000135199.1;transl_table=11 NZ_JPQY01000013.1 RefSeq gene 114820 115137 . - . ID=gene-IY40_RS25225;Name=priB;gbkey=Gene;gene=priB;gene_biotype=protein_coding;locus_tag=IY40_RS25225 NZ_JPQY01000013.1 Protein Homology CDS 114820 115137 . - 0 ID=cds-WP_049233092.1;Parent=gene-IY40_RS25225;Dbxref=GenBank:WP_049233092.1;Name=WP_049233092.1;Ontology_term=GO:0006260,GO:0003697,GO:0030894;gbkey=CDS;gene=priB;go_component=replisome|0030894||IEA;go_function=single-stranded DNA binding|0003697||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012666877.1;locus_tag=IY40_RS25225;product=primosomal replication protein N;protein_id=WP_049233092.1;transl_table=11 NZ_JPQY01000013.1 RefSeq gene 115146 115544 . - . ID=gene-IY40_RS10335;Name=rpsF;gbkey=Gene;gene=rpsF;gene_biotype=protein_coding;locus_tag=IY40_RS10335;old_locus_tag=IY40_10495 NZ_JPQY01000013.1 Protein Homology CDS 115146 115544 . - 0 ID=cds-WP_004933634.1;Parent=gene-IY40_RS10335;Dbxref=GenBank:WP_004933634.1;Name=WP_004933634.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsF;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020456251.1;locus_tag=IY40_RS10335;product=30S ribosomal protein S6;protein_id=WP_004933634.1;transl_table=11 NZ_JPQY01000013.1 RefSeq gene 115999 116265 . + . ID=gene-IY40_RS10340;Name=IY40_RS10340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS10340;old_locus_tag=IY40_10500 NZ_JPQY01000013.1 Protein Homology CDS 115999 116265 . + 0 ID=cds-WP_043139300.1;Parent=gene-IY40_RS10340;Dbxref=GenBank:WP_043139300.1;Name=WP_043139300.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019453370.1;locus_tag=IY40_RS10340;product=YdgH/BhsA/McbA family protein;protein_id=WP_043139300.1;transl_table=11 NZ_JPQY01000013.1 RefSeq gene 116365 116739 . - . ID=gene-IY40_RS10345;Name=IY40_RS10345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS10345;old_locus_tag=IY40_10505 NZ_JPQY01000013.1 Protein Homology CDS 116365 116739 . - 0 ID=cds-WP_043139304.1;Parent=gene-IY40_RS10345;Dbxref=GenBank:WP_043139304.1;Name=WP_043139304.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016929350.1;locus_tag=IY40_RS10345;product=hypothetical protein;protein_id=WP_043139304.1;transl_table=11 NZ_JPQY01000013.1 RefSeq gene 116863 117615 . - . ID=gene-IY40_RS10350;Name=yjfP;gbkey=Gene;gene=yjfP;gene_biotype=protein_coding;locus_tag=IY40_RS10350;old_locus_tag=IY40_10510 NZ_JPQY01000013.1 Protein Homology CDS 116863 117615 . - 0 ID=cds-WP_025305029.1;Parent=gene-IY40_RS10350;Dbxref=GenBank:WP_025305029.1;Name=WP_025305029.1;Ontology_term=GO:0006508,GO:0008236;gbkey=CDS;gene=yjfP;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019453372.1;locus_tag=IY40_RS10350;product=esterase;protein_id=WP_025305029.1;transl_table=11 NZ_JPQY01000013.1 RefSeq gene 117743 118051 . + . ID=gene-IY40_RS10355;Name=bsmA;gbkey=Gene;gene=bsmA;gene_biotype=protein_coding;locus_tag=IY40_RS10355;old_locus_tag=IY40_10515 NZ_JPQY01000013.1 Protein Homology CDS 117743 118051 . + 0 ID=cds-WP_025305028.1;Parent=gene-IY40_RS10355;Dbxref=GenBank:WP_025305028.1;Name=WP_025305028.1;gbkey=CDS;gene=bsmA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004952733.1;locus_tag=IY40_RS10355;product=biofilm peroxide resistance protein BsmA;protein_id=WP_025305028.1;transl_table=11 NZ_JPQY01000013.1 RefSeq gene 118175 118450 . + . ID=gene-IY40_RS10360;Name=IY40_RS10360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS10360;old_locus_tag=IY40_10520 NZ_JPQY01000013.1 Protein Homology CDS 118175 118450 . + 0 ID=cds-WP_025305027.1;Parent=gene-IY40_RS10360;Dbxref=GenBank:WP_025305027.1;Name=WP_025305027.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004952731.1;locus_tag=IY40_RS10360;product=YdgH/BhsA/McbA family protein;protein_id=WP_025305027.1;transl_table=11 NZ_JPQY01000013.1 RefSeq gene 118447 118845 . - . ID=gene-IY40_RS10365;Name=IY40_RS10365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS10365;old_locus_tag=IY40_10525 NZ_JPQY01000013.1 Protein Homology CDS 118447 118845 . - 0 ID=cds-WP_016929354.1;Parent=gene-IY40_RS10365;Dbxref=GenBank:WP_016929354.1;Name=WP_016929354.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016929354.1;locus_tag=IY40_RS10365;product=DUF350 domain-containing protein;protein_id=WP_016929354.1;transl_table=11 NZ_JPQY01000013.1 RefSeq gene 118912 120540 . - . ID=gene-IY40_RS10370;Name=IY40_RS10370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS10370;old_locus_tag=IY40_10530 NZ_JPQY01000013.1 Protein Homology CDS 118912 120540 . - 0 ID=cds-WP_025305026.1;Parent=gene-IY40_RS10370;Dbxref=GenBank:WP_025305026.1;Name=WP_025305026.1;Ontology_term=GO:0003995;gbkey=CDS;go_function=acyl-CoA dehydrogenase activity|0003995||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004933650.1;locus_tag=IY40_RS10370;product=isovaleryl-CoA dehydrogenase;protein_id=WP_025305026.1;transl_table=11 NZ_JPQY01000013.1 RefSeq gene 120656 121387 . - . ID=gene-IY40_RS10375;Name=rlmB;gbkey=Gene;gene=rlmB;gene_biotype=protein_coding;locus_tag=IY40_RS10375;old_locus_tag=IY40_10535 NZ_JPQY01000013.1 Protein Homology CDS 120656 121387 . - 0 ID=cds-WP_025305025.1;Parent=gene-IY40_RS10375;Dbxref=GenBank:WP_025305025.1;Name=WP_025305025.1;Ontology_term=GO:0006396,GO:0003723,GO:0008173;gbkey=CDS;gene=rlmB;go_function=RNA binding|0003723||IEA,RNA methyltransferase activity|0008173||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004933653.1;locus_tag=IY40_RS10375;product=23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB;protein_id=WP_025305025.1;transl_table=11 NZ_JPQY01000013.1 RefSeq gene 121449 123923 . - . ID=gene-IY40_RS10380;Name=rnr;gbkey=Gene;gene=rnr;gene_biotype=protein_coding;locus_tag=IY40_RS10380;old_locus_tag=IY40_10540 NZ_JPQY01000013.1 Protein Homology CDS 121449 123923 . - 0 ID=cds-WP_043139312.1;Parent=gene-IY40_RS10380;Dbxref=GenBank:WP_043139312.1;Name=WP_043139312.1;Ontology_term=GO:0016070,GO:0004540;gbkey=CDS;gene=rnr;go_function=RNA nuclease activity|0004540||IEA;go_process=RNA metabolic process|0016070||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015376392.1;locus_tag=IY40_RS10380;product=ribonuclease R;protein_id=WP_043139312.1;transl_table=11 NZ_JPQY01000013.1 RefSeq gene 123983 124408 . - . ID=gene-IY40_RS10385;Name=nsrR;gbkey=Gene;gene=nsrR;gene_biotype=protein_coding;locus_tag=IY40_RS10385;old_locus_tag=IY40_10545 NZ_JPQY01000013.1 Protein Homology CDS 123983 124408 . - 0 ID=cds-WP_025305023.1;Parent=gene-IY40_RS10385;Dbxref=GenBank:WP_025305023.1;Name=WP_025305023.1;gbkey=CDS;gene=nsrR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005134424.1;locus_tag=IY40_RS10385;product=nitric oxide-sensing transcriptional repressor NsrR;protein_id=WP_025305023.1;transl_table=11 NZ_JPQY01000013.1 RefSeq gene 124642 125940 . - . ID=gene-IY40_RS10390;Name=IY40_RS10390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS10390;old_locus_tag=IY40_10550 NZ_JPQY01000013.1 Protein Homology CDS 124642 125940 . - 0 ID=cds-WP_025305022.1;Parent=gene-IY40_RS10390;Dbxref=GenBank:WP_025305022.1;Name=WP_025305022.1;Ontology_term=GO:0006164,GO:0004019,GO:0005525;gbkey=CDS;go_function=adenylosuccinate synthase activity|0004019||IEA,GTP binding|0005525||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019842885.1;locus_tag=IY40_RS10390;product=adenylosuccinate synthase;protein_id=WP_025305022.1;transl_table=11 NZ_JPQY01000013.1 RefSeq gene 126039 126239 . - . ID=gene-IY40_RS10395;Name=IY40_RS10395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS10395;old_locus_tag=IY40_10555 NZ_JPQY01000013.1 Protein Homology CDS 126039 126239 . - 0 ID=cds-WP_004933666.1;Parent=gene-IY40_RS10395;Dbxref=GenBank:WP_004933666.1;Name=WP_004933666.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013811242.1;locus_tag=IY40_RS10395;product=DUF2065 domain-containing protein;protein_id=WP_004933666.1;transl_table=11 NZ_JPQY01000013.1 RefSeq gene 126303 127307 . - . ID=gene-IY40_RS10400;Name=hflC;gbkey=Gene;gene=hflC;gene_biotype=protein_coding;locus_tag=IY40_RS10400;old_locus_tag=IY40_10560 NZ_JPQY01000013.1 Protein Homology CDS 126303 127307 . - 0 ID=cds-WP_004933669.1;Parent=gene-IY40_RS10400;Dbxref=GenBank:WP_004933669.1;Name=WP_004933669.1;gbkey=CDS;gene=hflC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013811241.1;locus_tag=IY40_RS10400;product=protease modulator HflC;protein_id=WP_004933669.1;transl_table=11 NZ_JPQY01000013.1 RefSeq gene 127311 128561 . - . ID=gene-IY40_RS10405;Name=hflK;gbkey=Gene;gene=hflK;gene_biotype=protein_coding;locus_tag=IY40_RS10405;old_locus_tag=IY40_10565 NZ_JPQY01000013.1 Protein Homology CDS 127311 128561 . - 0 ID=cds-WP_025305021.1;Parent=gene-IY40_RS10405;Dbxref=GenBank:WP_025305021.1;Name=WP_025305021.1;Ontology_term=GO:0016020;gbkey=CDS;gene=hflK;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012004896.1;locus_tag=IY40_RS10405;product=FtsH protease activity modulator HflK;protein_id=WP_025305021.1;transl_table=11 NZ_JPQY01000013.1 RefSeq gene 128630 129910 . - . ID=gene-IY40_RS10410;Name=hflX;gbkey=Gene;gene=hflX;gene_biotype=protein_coding;locus_tag=IY40_RS10410;old_locus_tag=IY40_10570 NZ_JPQY01000013.1 Protein Homology CDS 128630 129910 . - 0 ID=cds-WP_004933675.1;Parent=gene-IY40_RS10410;Dbxref=GenBank:WP_004933675.1;Name=WP_004933675.1;Ontology_term=GO:0005525;gbkey=CDS;gene=hflX;go_function=GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006317445.1;locus_tag=IY40_RS10410;product=ribosome rescue GTPase HflX;protein_id=WP_004933675.1;transl_table=11 NZ_JPQY01000013.1 RefSeq gene 130009 130317 . - . ID=gene-IY40_RS10415;Name=hfq;gbkey=Gene;gene=hfq;gene_biotype=protein_coding;locus_tag=IY40_RS10415;old_locus_tag=IY40_10575 NZ_JPQY01000013.1 Protein Homology CDS 130009 130317 . - 0 ID=cds-WP_004933678.1;Parent=gene-IY40_RS10415;Dbxref=GenBank:WP_004933678.1;Name=WP_004933678.1;Ontology_term=GO:0006355,GO:0003723;gbkey=CDS;gene=hfq;go_function=RNA binding|0003723||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224716.1;locus_tag=IY40_RS10415;product=RNA chaperone Hfq;protein_id=WP_004933678.1;transl_table=11 NZ_JPQY01000013.1 RefSeq gene 130432 131373 . - . ID=gene-IY40_RS10420;Name=miaA;gbkey=Gene;gene=miaA;gene_biotype=protein_coding;locus_tag=IY40_RS10420;old_locus_tag=IY40_10580 NZ_JPQY01000013.1 Protein Homology CDS 130432 131373 . - 0 ID=cds-WP_025305020.1;Parent=gene-IY40_RS10420;Dbxref=GenBank:WP_025305020.1;Name=WP_025305020.1;Ontology_term=GO:0006400,GO:0052381,GO:0005737;gbkey=CDS;gene=miaA;go_component=cytoplasm|0005737||IEA;go_function=tRNA dimethylallyltransferase activity|0052381||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012004893.1;locus_tag=IY40_RS10420;product=tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA;protein_id=WP_025305020.1;transl_table=11 NZ_JPQY01000013.1 RefSeq gene 131366 133249 . - . ID=gene-IY40_RS10425;Name=mutL;gbkey=Gene;gene=mutL;gene_biotype=protein_coding;locus_tag=IY40_RS10425;old_locus_tag=IY40_10585 NZ_JPQY01000013.1 Protein Homology CDS 131366 133249 . - 0 ID=cds-WP_043139316.1;Parent=gene-IY40_RS10425;Dbxref=GenBank:WP_043139316.1;Name=WP_043139316.1;Ontology_term=GO:0006298,GO:0005524,GO:0016887,GO:0030983,GO:0032300;gbkey=CDS;gene=mutL;go_component=mismatch repair complex|0032300||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,mismatched DNA binding|0030983||IEA;go_process=mismatch repair|0006298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012004892.1;locus_tag=IY40_RS10425;product=DNA mismatch repair endonuclease MutL;protein_id=WP_043139316.1;transl_table=11 NZ_JPQY01000013.1 RefSeq gene 133272 135083 . - . ID=gene-IY40_RS10430;Name=amiB;gbkey=Gene;gene=amiB;gene_biotype=protein_coding;locus_tag=IY40_RS10430;old_locus_tag=IY40_10590 NZ_JPQY01000013.1 Protein Homology CDS 133272 135083 . - 0 ID=cds-WP_025305018.1;Parent=gene-IY40_RS10430;Dbxref=GenBank:WP_025305018.1;Name=WP_025305018.1;Ontology_term=GO:0009253,GO:0008745;gbkey=CDS;gene=amiB;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016929364.1;locus_tag=IY40_RS10430;product=N-acetylmuramoyl-L-alanine amidase AmiB;protein_id=WP_025305018.1;transl_table=11 NZ_JPQY01000013.1 RefSeq gene 135091 135561 . - . ID=gene-IY40_RS10435;Name=tsaE;gbkey=Gene;gene=tsaE;gene_biotype=protein_coding;locus_tag=IY40_RS10435;old_locus_tag=IY40_10595 NZ_JPQY01000013.1 Protein Homology CDS 135091 135561 . - 0 ID=cds-WP_025305017.1;Parent=gene-IY40_RS10435;Dbxref=GenBank:WP_025305017.1;Name=WP_025305017.1;Ontology_term=GO:0002949;gbkey=CDS;gene=tsaE;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004929931.1;locus_tag=IY40_RS10435;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE;protein_id=WP_025305017.1;transl_table=11 NZ_JPQY01000013.1 RefSeq gene 135572 137086 . - . ID=gene-IY40_RS10440;Name=nnr;gbkey=Gene;gene=nnr;gene_biotype=protein_coding;locus_tag=IY40_RS10440;old_locus_tag=IY40_10600 NZ_JPQY01000013.1 Protein Homology CDS 135572 137086 . - 0 ID=cds-WP_043139320.1;Parent=gene-IY40_RS10440;Dbxref=GenBank:WP_043139320.1;Name=WP_043139320.1;Ontology_term=GO:0052855;gbkey=CDS;gene=nnr;go_function=ADP-dependent NAD(P)H-hydrate dehydratase activity|0052855||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019080720.1;locus_tag=IY40_RS10440;product=bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase;protein_id=WP_043139320.1;transl_table=11 NZ_JPQY01000013.1 RefSeq gene 137085 138224 . + . ID=gene-IY40_RS10445;Name=queG;gbkey=Gene;gene=queG;gene_biotype=protein_coding;locus_tag=IY40_RS10445;old_locus_tag=IY40_10605 NZ_JPQY01000013.1 Protein Homology CDS 137085 138224 . + 0 ID=cds-WP_025305015.1;Parent=gene-IY40_RS10445;Dbxref=GenBank:WP_025305015.1;Name=WP_025305015.1;Ontology_term=GO:0008033,GO:0008616,GO:0051539,GO:0052693;gbkey=CDS;gene=queG;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,epoxyqueuosine reductase activity|0052693||IEA;go_process=tRNA processing|0008033||IEA,tRNA queuosine(34) biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016929367.1;locus_tag=IY40_RS10445;product=tRNA epoxyqueuosine(34) reductase QueG;protein_id=WP_025305015.1;transl_table=11 NZ_JPQY01000013.1 RefSeq gene 138536 138611 . - . ID=gene-IY40_RS10450;Name=IY40_RS10450;gbkey=Gene;gene_biotype=tRNA;locus_tag=IY40_RS10450;old_locus_tag=IY40_10610 NZ_JPQY01000013.1 tRNAscan-SE tRNA 138536 138611 . - . ID=rna-IY40_RS10450;Parent=gene-IY40_RS10450;anticodon=(pos:complement(138576..138578));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=IY40_RS10450;product=tRNA-Gly NZ_JPQY01000013.1 tRNAscan-SE exon 138536 138611 . - . ID=exon-IY40_RS10450-1;Parent=rna-IY40_RS10450;anticodon=(pos:complement(138576..138578));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=IY40_RS10450;product=tRNA-Gly NZ_JPQY01000013.1 RefSeq gene 138666 138741 . - . ID=gene-IY40_RS10455;Name=IY40_RS10455;gbkey=Gene;gene_biotype=tRNA;locus_tag=IY40_RS10455;old_locus_tag=IY40_10615 NZ_JPQY01000013.1 tRNAscan-SE tRNA 138666 138741 . - . ID=rna-IY40_RS10455;Parent=gene-IY40_RS10455;anticodon=(pos:complement(138706..138708));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=IY40_RS10455;product=tRNA-Gly NZ_JPQY01000013.1 tRNAscan-SE exon 138666 138741 . - . ID=exon-IY40_RS10455-1;Parent=rna-IY40_RS10455;anticodon=(pos:complement(138706..138708));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=IY40_RS10455;product=tRNA-Gly NZ_JPQY01000013.1 RefSeq gene 138808 138883 . - . ID=gene-IY40_RS10460;Name=IY40_RS10460;gbkey=Gene;gene_biotype=tRNA;locus_tag=IY40_RS10460;old_locus_tag=IY40_10620 NZ_JPQY01000013.1 tRNAscan-SE tRNA 138808 138883 . - . ID=rna-IY40_RS10460;Parent=gene-IY40_RS10460;anticodon=(pos:complement(138848..138850));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=IY40_RS10460;product=tRNA-Gly NZ_JPQY01000013.1 tRNAscan-SE exon 138808 138883 . - . ID=exon-IY40_RS10460-1;Parent=rna-IY40_RS10460;anticodon=(pos:complement(138848..138850));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=IY40_RS10460;product=tRNA-Gly NZ_JPQY01000013.1 RefSeq gene 139076 139621 . - . ID=gene-IY40_RS10465;Name=orn;gbkey=Gene;gene=orn;gene_biotype=protein_coding;locus_tag=IY40_RS10465;old_locus_tag=IY40_10625 NZ_JPQY01000013.1 Protein Homology CDS 139076 139621 . - 0 ID=cds-WP_004929689.1;Parent=gene-IY40_RS10465;Dbxref=GenBank:WP_004929689.1;Name=WP_004929689.1;Ontology_term=GO:0000175,GO:0003676;gbkey=CDS;gene=orn;go_function=3'-5'-RNA exonuclease activity|0000175||IEA,nucleic acid binding|0003676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019453388.1;locus_tag=IY40_RS10465;product=oligoribonuclease;protein_id=WP_004929689.1;transl_table=11 NZ_JPQY01000013.1 RefSeq gene 139867 140916 . + . ID=gene-IY40_RS10470;Name=rsgA;gbkey=Gene;gene=rsgA;gene_biotype=protein_coding;locus_tag=IY40_RS10470;old_locus_tag=IY40_10630 NZ_JPQY01000013.1 Protein Homology CDS 139867 140916 . + 0 ID=cds-WP_004929686.1;Parent=gene-IY40_RS10470;Dbxref=GenBank:WP_004929686.1;Name=WP_004929686.1;Ontology_term=GO:0003924,GO:0005525;gbkey=CDS;gene=rsgA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016929368.1;locus_tag=IY40_RS10470;product=small ribosomal subunit biogenesis GTPase RsgA;protein_id=WP_004929686.1;transl_table=11 NZ_JPQY01000013.1 RefSeq gene 140993 141886 . + . ID=gene-IY40_RS10475;Name=asd;gbkey=Gene;gene=asd;gene_biotype=protein_coding;locus_tag=IY40_RS10475;old_locus_tag=IY40_10635 NZ_JPQY01000013.1 Protein Homology CDS 140993 141886 . + 0 ID=cds-WP_025305014.1;Parent=gene-IY40_RS10475;Dbxref=GenBank:WP_025305014.1;Name=WP_025305014.1;Note=Phosphatidylserine decarboxylase is synthesized as a single chain precursor. Generation of the pyruvoyl active site from a Ser is coupled to cleavage of a Gly-Ser bond between the larger (beta) and smaller (alpha chains). It is an integral membrane protein.;Ontology_term=GO:0008654,GO:0004609;gbkey=CDS;gene=asd;go_function=phosphatidylserine decarboxylase activity|0004609||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015376384.1;locus_tag=IY40_RS10475;product=archaetidylserine decarboxylase;protein_id=WP_025305014.1;transl_table=11 NZ_JPQY01000013.1 RefSeq gene 141900 145247 . + . ID=gene-IY40_RS10480;Name=mscM;gbkey=Gene;gene=mscM;gene_biotype=protein_coding;locus_tag=IY40_RS10480;old_locus_tag=IY40_10640 NZ_JPQY01000013.1 Protein Homology CDS 141900 145247 . + 0 ID=cds-WP_043139325.1;Parent=gene-IY40_RS10480;Dbxref=GenBank:WP_043139325.1;Name=WP_043139325.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=mscM;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013811231.1;locus_tag=IY40_RS10480;product=miniconductance mechanosensitive channel MscM;protein_id=WP_043139325.1;transl_table=11 NZ_JPQY01000013.1 RefSeq gene 145315 146292 . - . ID=gene-IY40_RS10485;Name=epmA;gbkey=Gene;gene=epmA;gene_biotype=protein_coding;locus_tag=IY40_RS10485;old_locus_tag=IY40_10645 NZ_JPQY01000013.1 Protein Homology CDS 145315 146292 . - 0 ID=cds-WP_025305012.1;Parent=gene-IY40_RS10485;Dbxref=GenBank:WP_025305012.1;Name=WP_025305012.1;Ontology_term=GO:0006418,GO:0004812;gbkey=CDS;gene=epmA;go_function=aminoacyl-tRNA ligase activity|0004812||IEA;go_process=tRNA aminoacylation for protein translation|0006418||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209139.1;locus_tag=IY40_RS10485;product=elongation factor P--(R)-beta-lysine ligase;protein_id=WP_025305012.1;transl_table=11 NZ_JPQY01000013.1 RefSeq gene 146678 148474 . + . ID=gene-IY40_RS10490;Name=frdA;gbkey=Gene;gene=frdA;gene_biotype=protein_coding;locus_tag=IY40_RS10490;old_locus_tag=IY40_10650 NZ_JPQY01000013.1 Protein Homology CDS 146678 148474 . + 0 ID=cds-WP_025305011.1;Parent=gene-IY40_RS10490;Dbxref=GenBank:WP_025305011.1;Name=WP_025305011.1;Ontology_term=GO:0009061,GO:0022900,GO:0016491,GO:0050660;gbkey=CDS;gene=frdA;go_function=oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=anaerobic respiration|0009061||IEA,electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011815417.1;locus_tag=IY40_RS10490;product=fumarate reductase (quinol) flavoprotein subunit;protein_id=WP_025305011.1;transl_table=11 NZ_JPQY01000013.1 RefSeq gene 148467 149201 . + . ID=gene-IY40_RS10495;Name=IY40_RS10495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS10495;old_locus_tag=IY40_10655 NZ_JPQY01000013.1 Protein Homology CDS 148467 149201 . + 0 ID=cds-WP_004929676.1;Parent=gene-IY40_RS10495;Dbxref=GenBank:WP_004929676.1;Name=WP_004929676.1;Ontology_term=GO:0006099,GO:0009055,GO:0016491,GO:0051536;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,oxidoreductase activity|0016491||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005175554.1;locus_tag=IY40_RS10495;product=succinate dehydrogenase/fumarate reductase iron-sulfur subunit;protein_id=WP_004929676.1;transl_table=11 NZ_JPQY01000013.1 RefSeq gene 149216 149608 . + . ID=gene-IY40_RS10500;Name=frdC;gbkey=Gene;gene=frdC;gene_biotype=protein_coding;locus_tag=IY40_RS10500;old_locus_tag=IY40_10660 NZ_JPQY01000013.1 Protein Homology CDS 149216 149608 . + 0 ID=cds-WP_025305010.1;Parent=gene-IY40_RS10500;Dbxref=GenBank:WP_025305010.1;Name=WP_025305010.1;Ontology_term=GO:0016020;gbkey=CDS;gene=frdC;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002441580.1;locus_tag=IY40_RS10500;product=fumarate reductase subunit FrdC;protein_id=WP_025305010.1;transl_table=11 NZ_JPQY01000013.1 RefSeq gene 149621 149980 . + . ID=gene-IY40_RS10505;Name=frdD;gbkey=Gene;gene=frdD;gene_biotype=protein_coding;locus_tag=IY40_RS10505;old_locus_tag=IY40_10665 NZ_JPQY01000013.1 Protein Homology CDS 149621 149980 . + 0 ID=cds-WP_043139328.1;Parent=gene-IY40_RS10505;Dbxref=GenBank:WP_043139328.1;Name=WP_043139328.1;gbkey=CDS;gene=frdD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463204.1;locus_tag=IY40_RS10505;product=fumarate reductase subunit FrdD;protein_id=WP_043139328.1;transl_table=11 NZ_JPQY01000013.1 RefSeq gene 150065 150598 . + . ID=gene-IY40_RS10510;Name=blc;gbkey=Gene;gene=blc;gene_biotype=protein_coding;locus_tag=IY40_RS10510;old_locus_tag=IY40_10670 NZ_JPQY01000013.1 Protein Homology CDS 150065 150598 . + 0 ID=cds-WP_043139332.1;Parent=gene-IY40_RS10510;Dbxref=GenBank:WP_043139332.1;Name=WP_043139332.1;gbkey=CDS;gene=blc;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006323189.1;locus_tag=IY40_RS10510;product=outer membrane lipoprotein Blc;protein_id=WP_043139332.1;transl_table=11 NZ_JPQY01000013.1 RefSeq gene 150592 150909 . - . ID=gene-IY40_RS10515;Name=sugE;gbkey=Gene;gene=sugE;gene_biotype=protein_coding;locus_tag=IY40_RS10515;old_locus_tag=IY40_10675 NZ_JPQY01000013.1 Protein Homology CDS 150592 150909 . - 0 ID=cds-WP_004929669.1;Parent=gene-IY40_RS10515;Dbxref=GenBank:WP_004929669.1;Name=WP_004929669.1;Ontology_term=GO:0022857,GO:0016020;gbkey=CDS;gene=sugE;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463202.1;locus_tag=IY40_RS10515;product=quaternary ammonium compound efflux SMR transporter SugE;protein_id=WP_004929669.1;transl_table=11 NZ_JPQY01000013.1 RefSeq gene 151102 151233 . - . ID=gene-IY40_RS10520;Name=IY40_RS10520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS10520;old_locus_tag=IY40_10680 NZ_JPQY01000013.1 Protein Homology CDS 151102 151233 . - 0 ID=cds-WP_004929668.1;Parent=gene-IY40_RS10520;Dbxref=GenBank:WP_004929668.1;Name=WP_004929668.1;Ontology_term=GO:0009636,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=response to toxic substance|0009636||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019453399.1;locus_tag=IY40_RS10520;product=entericidin A/B family lipoprotein;protein_id=WP_004929668.1;transl_table=11 NZ_JPQY01000013.1 RefSeq gene 151354 151485 . - . ID=gene-IY40_RS10525;Name=IY40_RS10525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS10525;old_locus_tag=IY40_10685 NZ_JPQY01000013.1 Protein Homology CDS 151354 151485 . - 0 ID=cds-WP_004929667.1;Parent=gene-IY40_RS10525;Dbxref=GenBank:WP_004929667.1;Name=WP_004929667.1;Ontology_term=GO:0009636,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=response to toxic substance|0009636||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004929667.1;locus_tag=IY40_RS10525;product=entericidin A/B family lipoprotein;protein_id=WP_004929667.1;transl_table=11 NZ_JPQY01000013.1 RefSeq gene 151556 152122 . - . ID=gene-IY40_RS10530;Name=efp;gbkey=Gene;gene=efp;gene_biotype=protein_coding;locus_tag=IY40_RS10530;old_locus_tag=IY40_10690 NZ_JPQY01000013.1 Protein Homology CDS 151556 152122 . - 0 ID=cds-WP_004929666.1;Parent=gene-IY40_RS10530;Dbxref=GenBank:WP_004929666.1;Name=WP_004929666.1;Ontology_term=GO:0006414,GO:0003746,GO:0005737;gbkey=CDS;gene=efp;go_component=cytoplasm|0005737||IEA;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004871142.1;locus_tag=IY40_RS10530;product=elongation factor P;protein_id=WP_004929666.1;transl_table=11 NZ_JPQY01000013.1 RefSeq gene 152165 153193 . + . ID=gene-IY40_RS10535;Name=epmB;gbkey=Gene;gene=epmB;gene_biotype=protein_coding;locus_tag=IY40_RS10535;old_locus_tag=IY40_10695 NZ_JPQY01000013.1 Protein Homology CDS 152165 153193 . + 0 ID=cds-WP_043139335.1;Parent=gene-IY40_RS10535;Dbxref=GenBank:WP_043139335.1;Name=WP_043139335.1;gbkey=CDS;gene=epmB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004929665.1;locus_tag=IY40_RS10535;product=EF-P beta-lysylation protein EpmB;protein_id=WP_043139335.1;transl_table=11 NZ_JPQY01000013.1 RefSeq gene 153281 153625 . - . ID=gene-IY40_RS10540;Name=IY40_RS10540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS10540;old_locus_tag=IY40_10700 NZ_JPQY01000013.1 Protein Homology CDS 153281 153625 . - 0 ID=cds-WP_025305007.1;Parent=gene-IY40_RS10540;Dbxref=GenBank:WP_025305007.1;Name=WP_025305007.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012004874.1;locus_tag=IY40_RS10540;product=DUF4156 domain-containing protein;protein_id=WP_025305007.1;transl_table=11 NZ_JPQY01000013.1 RefSeq gene 153929 155554 . - . ID=gene-IY40_RS10545;Name=IY40_RS10545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS10545;old_locus_tag=IY40_10705 NZ_JPQY01000013.1 Protein Homology CDS 153929 155554 . - 0 ID=cds-WP_043139338.1;Parent=gene-IY40_RS10545;Dbxref=GenBank:WP_043139338.1;Name=WP_043139338.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015376377.1;locus_tag=IY40_RS10545;product=methyl-accepting chemotaxis protein;protein_id=WP_043139338.1;transl_table=11 NZ_JPQY01000013.1 RefSeq gene 155780 157426 . - . ID=gene-IY40_RS10550;Name=groL;gbkey=Gene;gene=groL;gene_biotype=protein_coding;locus_tag=IY40_RS10550;old_locus_tag=IY40_10710 NZ_JPQY01000013.1 Protein Homology CDS 155780 157426 . - 0 ID=cds-WP_004929662.1;Parent=gene-IY40_RS10550;Dbxref=GenBank:WP_004929662.1;Name=WP_004929662.1;Note=60 kDa chaperone family%3B promotes refolding of misfolded polypeptides especially under stressful conditions%3B forms two stacked rings of heptamers to form a barrel-shaped 14mer%3B ends can be capped by GroES%3B misfolded proteins enter the barrel where they are refolded when GroES binds;Ontology_term=GO:0042026,GO:0140662;gbkey=CDS;gene=groL;go_function=ATP-dependent protein folding chaperone|0140662||IEA;go_process=protein refolding|0042026||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120975.1;locus_tag=IY40_RS10550;product=chaperonin GroEL;protein_id=WP_004929662.1;transl_table=11 NZ_JPQY01000013.1 RefSeq gene 157471 157764 . - . ID=gene-IY40_RS10555;Name=IY40_RS10555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS10555;old_locus_tag=IY40_10715 NZ_JPQY01000013.1 Protein Homology CDS 157471 157764 . - 0 ID=cds-WP_004929661.1;Parent=gene-IY40_RS10555;Dbxref=GenBank:WP_004929661.1;Name=WP_004929661.1;Ontology_term=GO:0005524,GO:0140662;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP-dependent protein folding chaperone|0140662||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000027827.1;locus_tag=IY40_RS10555;product=co-chaperone GroES;protein_id=WP_004929661.1;transl_table=11 NZ_JPQY01000013.1 RefSeq gene 157954 158442 . - . ID=gene-IY40_RS10560;Name=IY40_RS10560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS10560;old_locus_tag=IY40_10720 NZ_JPQY01000013.1 Protein Homology CDS 157954 158442 . - 0 ID=cds-WP_043139340.1;Parent=gene-IY40_RS10560;Dbxref=GenBank:WP_043139340.1;Name=WP_043139340.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006322065.1;locus_tag=IY40_RS10560;product=FxsA family protein;protein_id=WP_043139340.1;transl_table=11 NZ_JPQY01000013.1 RefSeq gene 158812 160248 . + . ID=gene-IY40_RS10565;Name=aspA;gbkey=Gene;gene=aspA;gene_biotype=protein_coding;locus_tag=IY40_RS10565;old_locus_tag=IY40_10725 NZ_JPQY01000013.1 Protein Homology CDS 158812 160248 . + 0 ID=cds-WP_004929659.1;Parent=gene-IY40_RS10565;Dbxref=GenBank:WP_004929659.1;Name=WP_004929659.1;Ontology_term=GO:0006520,GO:0008797;gbkey=CDS;gene=aspA;go_function=aspartate ammonia-lyase activity|0008797||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313147.2;locus_tag=IY40_RS10565;product=aspartate ammonia-lyase;protein_id=WP_004929659.1;transl_table=11 NZ_JPQY01000013.1 RefSeq gene 160374 161675 . + . ID=gene-IY40_RS10570;Name=IY40_RS10570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS10570;old_locus_tag=IY40_10730 NZ_JPQY01000013.1 Protein Homology CDS 160374 161675 . + 0 ID=cds-WP_016929379.1;Parent=gene-IY40_RS10570;Dbxref=GenBank:WP_016929379.1;Name=WP_016929379.1;Ontology_term=GO:0015740,GO:0015556,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=C4-dicarboxylate transmembrane transporter activity|0015556||IEA;go_process=C4-dicarboxylate transport|0015740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209123.1;locus_tag=IY40_RS10570;product=anaerobic C4-dicarboxylate transporter;protein_id=WP_016929379.1;transl_table=11 NZ_JPQY01000013.1 RefSeq gene 161785 162108 . + . ID=gene-IY40_RS10575;Name=cutA;gbkey=Gene;gene=cutA;gene_biotype=protein_coding;locus_tag=IY40_RS10575;old_locus_tag=IY40_10735 NZ_JPQY01000013.1 Protein Homology CDS 161785 162108 . + 0 ID=cds-WP_004929657.1;Parent=gene-IY40_RS10575;Dbxref=GenBank:WP_004929657.1;Name=WP_004929657.1;gbkey=CDS;gene=cutA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015376376.1;locus_tag=IY40_RS10575;product=divalent cation tolerance protein CutA;protein_id=WP_004929657.1;transl_table=11 NZ_JPQY01000013.1 RefSeq gene 162084 163793 . + . ID=gene-IY40_RS10580;Name=IY40_RS10580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS10580;old_locus_tag=IY40_10740 NZ_JPQY01000013.1 Protein Homology CDS 162084 163793 . + 0 ID=cds-WP_043139344.1;Parent=gene-IY40_RS10580;Dbxref=GenBank:WP_043139344.1;Name=WP_043139344.1;Ontology_term=GO:0017004,GO:0009055,GO:0030554,GO:0047134;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,adenyl nucleotide binding|0030554||IEA,protein-disulfide reductase [NAD(P)H] activity|0047134||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020453674.1;locus_tag=IY40_RS10580;product=protein-disulfide reductase DsbD;protein_id=WP_043139344.1;transl_table=11 NZ_JPQY01000013.1 RefSeq gene 163836 164411 . + . ID=gene-IY40_RS10585;Name=dicD;gbkey=Gene;gene=dicD;gene_biotype=protein_coding;gene_synonym=yjdC;locus_tag=IY40_RS10585;old_locus_tag=IY40_10745 NZ_JPQY01000013.1 Protein Homology CDS 163836 164411 . + 0 ID=cds-WP_004929655.1;Parent=gene-IY40_RS10585;Dbxref=GenBank:WP_004929655.1;Name=WP_004929655.1;Ontology_term=GO:0003700;gbkey=CDS;gene=dicD;go_function=DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005175574.1;locus_tag=IY40_RS10585;product=division control transcriptional repressor DicD;protein_id=WP_004929655.1;transl_table=11 NZ_JPQY01000013.1 RefSeq gene 164572 164647 . + . ID=gene-IY40_RS10590;Name=IY40_RS10590;gbkey=Gene;gene_biotype=tRNA;locus_tag=IY40_RS10590;old_locus_tag=IY40_10750 NZ_JPQY01000013.1 tRNAscan-SE tRNA 164572 164647 . + . ID=rna-IY40_RS10590;Parent=gene-IY40_RS10590;anticodon=(pos:164605..164607);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=IY40_RS10590;product=tRNA-Phe NZ_JPQY01000013.1 tRNAscan-SE exon 164572 164647 . + . ID=exon-IY40_RS10590-1;Parent=rna-IY40_RS10590;anticodon=(pos:164605..164607);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=IY40_RS10590;product=tRNA-Phe NZ_JPQY01000013.1 RefSeq gene 164840 165871 . - . ID=gene-IY40_RS10595;Name=IY40_RS10595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS10595;old_locus_tag=IY40_10755 NZ_JPQY01000013.1 Protein Homology CDS 164840 165871 . - 0 ID=cds-WP_080287127.1;Parent=gene-IY40_RS10595;Dbxref=GenBank:WP_080287127.1;Name=WP_080287127.1;Ontology_term=GO:0006310,GO:0009009;gbkey=CDS;go_function=site-specific recombinase activity|0009009||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019456103.1;locus_tag=IY40_RS10595;product=tyrosine-type recombinase/integrase;protein_id=WP_080287127.1;transl_table=11 NZ_JPQY01000013.1 RefSeq gene 165957 167657 . - . ID=gene-IY40_RS10600;Name=IY40_RS10600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS10600;old_locus_tag=IY40_10760 NZ_JPQY01000013.1 Protein Homology CDS 165957 167657 . - 0 ID=cds-WP_043139350.1;Parent=gene-IY40_RS10600;Dbxref=GenBank:WP_043139350.1;Name=WP_043139350.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013811216.1;locus_tag=IY40_RS10600;product=TraI domain-containing protein;protein_id=WP_043139350.1;transl_table=11 NZ_JPQY01000013.1 RefSeq gene 167651 169099 . - . ID=gene-IY40_RS10605;Name=IY40_RS10605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS10605;old_locus_tag=IY40_10765 NZ_JPQY01000013.1 Protein Homology CDS 167651 169099 . - 0 ID=cds-WP_043139353.1;Parent=gene-IY40_RS10605;Dbxref=GenBank:WP_043139353.1;Name=WP_043139353.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013060299.1;locus_tag=IY40_RS10605;product=UvrD-helicase domain-containing protein;protein_id=WP_043139353.1;transl_table=11 NZ_JPQY01000013.1 RefSeq gene 169766 170599 . + . ID=gene-IY40_RS10610;Name=IY40_RS10610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS10610;old_locus_tag=IY40_10770 NZ_JPQY01000013.1 Protein Homology CDS 169766 170599 . + 0 ID=cds-WP_019456106.1;Parent=gene-IY40_RS10610;Dbxref=GenBank:WP_019456106.1;Name=WP_019456106.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013811214.1;locus_tag=IY40_RS10610;product=helix-turn-helix domain-containing protein;protein_id=WP_019456106.1;transl_table=11 NZ_JPQY01000013.1 RefSeq gene 170606 171592 . + . ID=gene-IY40_RS10615;Name=IY40_RS10615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS10615;old_locus_tag=IY40_10775 NZ_JPQY01000013.1 Protein Homology CDS 170606 171592 . + 0 ID=cds-WP_072008248.1;Parent=gene-IY40_RS10615;Dbxref=GenBank:WP_072008248.1;Name=WP_072008248.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001773451.1;locus_tag=IY40_RS10615;product=glycosyltransferase family 9 protein;protein_id=WP_072008248.1;transl_table=11 NZ_JPQY01000013.1 RefSeq gene 171585 172088 . + . ID=gene-IY40_RS10620;Name=IY40_RS10620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS10620;old_locus_tag=IY40_10780 NZ_JPQY01000013.1 Protein Homology CDS 171585 172088 . + 0 ID=cds-WP_043139356.1;Parent=gene-IY40_RS10620;Dbxref=GenBank:WP_043139356.1;Name=WP_043139356.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006327918.1;locus_tag=IY40_RS10620;product=putative pterin-binding protein;protein_id=WP_043139356.1;transl_table=11 NZ_JPQY01000013.1 RefSeq gene 172085 173797 . + . ID=gene-IY40_RS10625;Name=IY40_RS10625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS10625;old_locus_tag=IY40_10785 NZ_JPQY01000013.1 Protein Homology CDS 172085 173797 . + 0 ID=cds-WP_043139358.1;Parent=gene-IY40_RS10625;Dbxref=GenBank:WP_043139358.1;Name=WP_043139358.1;Ontology_term=GO:0000160,GO:0007165,GO:0000155,GO:0000156,GO:0004673,GO:0005524;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,phosphorelay response regulator activity|0000156||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019456109.1;locus_tag=IY40_RS10625;product=hybrid sensor histidine kinase/response regulator;protein_id=WP_043139358.1;transl_table=11 NZ_JPQY01000013.1 RefSeq gene 173852 174541 . - . ID=gene-IY40_RS10630;Name=IY40_RS10630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS10630;old_locus_tag=IY40_10790 NZ_JPQY01000013.1 Protein Homology CDS 173852 174541 . - 0 ID=cds-WP_043139361.1;Parent=gene-IY40_RS10630;Dbxref=GenBank:WP_043139361.1;Name=WP_043139361.1;Ontology_term=GO:0003677,GO:0008170;gbkey=CDS;go_function=DNA binding|0003677||IEA,N-methyltransferase activity|0008170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001422102.1;locus_tag=IY40_RS10630;product=N-6 DNA methylase;protein_id=WP_043139361.1;transl_table=11 NZ_JPQY01000013.1 RefSeq gene 174655 175569 . - . ID=gene-IY40_RS10635;Name=IY40_RS10635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS10635;old_locus_tag=IY40_10795 NZ_JPQY01000013.1 Protein Homology CDS 174655 175569 . - 0 ID=cds-WP_043139363.1;Parent=gene-IY40_RS10635;Dbxref=GenBank:WP_043139363.1;Name=WP_043139363.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013060293.1;locus_tag=IY40_RS10635;product=DUF1281 domain-containing protein;protein_id=WP_043139363.1;transl_table=11 NZ_JPQY01000013.1 RefSeq gene 175681 175953 . - . ID=gene-IY40_RS10640;Name=IY40_RS10640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS10640;old_locus_tag=IY40_10800 NZ_JPQY01000013.1 Protein Homology CDS 175681 175953 . - 0 ID=cds-WP_043139366.1;Parent=gene-IY40_RS10640;Dbxref=GenBank:WP_043139366.1;Name=WP_043139366.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016260139.1;locus_tag=IY40_RS10640;product=hypothetical protein;protein_id=WP_043139366.1;transl_table=11 NZ_JPQY01000013.1 RefSeq gene 175946 176224 . - . ID=gene-IY40_RS10645;Name=IY40_RS10645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS10645;old_locus_tag=IY40_10805 NZ_JPQY01000013.1 Protein Homology CDS 175946 176224 . - 0 ID=cds-WP_043139370.1;Parent=gene-IY40_RS10645;Dbxref=GenBank:WP_043139370.1;Name=WP_043139370.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016260138.1;locus_tag=IY40_RS10645;product=TA system toxin CbtA family protein;protein_id=WP_043139370.1;transl_table=11 NZ_JPQY01000013.1 RefSeq gene 176236 177246 . - . ID=gene-IY40_RS10650;Name=IY40_RS10650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS10650;old_locus_tag=IY40_10810 NZ_JPQY01000013.1 Protein Homology CDS 176236 177246 . - 0 ID=cds-WP_043139374.1;Parent=gene-IY40_RS10650;Dbxref=GenBank:WP_043139374.1;Name=WP_043139374.1;Ontology_term=GO:0003697,GO:0008237,GO:0008270;gbkey=CDS;go_function=single-stranded DNA binding|0003697||IEA,metallopeptidase activity|0008237||IEA,zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012146760.1;locus_tag=IY40_RS10650;product=ArdC family protein;protein_id=WP_043139374.1;transl_table=11 NZ_JPQY01000013.1 RefSeq gene 177322 177924 . - . ID=gene-IY40_RS10655;Name=IY40_RS10655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS10655;old_locus_tag=IY40_10815 NZ_JPQY01000013.1 Protein Homology CDS 177322 177924 . - 0 ID=cds-WP_043139377.1;Parent=gene-IY40_RS10655;Dbxref=GenBank:WP_043139377.1;Name=WP_043139377.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013060291.1;locus_tag=IY40_RS10655;product=DUF3085 domain-containing protein;protein_id=WP_043139377.1;transl_table=11 NZ_JPQY01000013.1 RefSeq gene 178012 178497 . - . ID=gene-IY40_RS10660;Name=IY40_RS10660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS10660;old_locus_tag=IY40_10820 NZ_JPQY01000013.1 Protein Homology CDS 178012 178497 . - 0 ID=cds-WP_043139380.1;Parent=gene-IY40_RS10660;Dbxref=GenBank:WP_043139380.1;Name=WP_043139380.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013060290.1;locus_tag=IY40_RS10660;product=hypothetical protein;protein_id=WP_043139380.1;transl_table=11 NZ_JPQY01000013.1 RefSeq gene 178571 179149 . - . ID=gene-IY40_RS24805;Name=IY40_RS24805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS24805;old_locus_tag=IY40_10825 NZ_JPQY01000013.1 GeneMarkS-2+ CDS 178571 179149 . - 0 ID=cds-WP_050505152.1;Parent=gene-IY40_RS24805;Dbxref=GenBank:WP_050505152.1;Name=WP_050505152.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IY40_RS24805;product=hypothetical protein;protein_id=WP_050505152.1;transl_table=11 NZ_JPQY01000013.1 RefSeq gene 179241 179615 . - . ID=gene-IY40_RS10670;Name=IY40_RS10670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS10670;old_locus_tag=IY40_10830 NZ_JPQY01000013.1 Protein Homology CDS 179241 179615 . - 0 ID=cds-WP_043139382.1;Parent=gene-IY40_RS10670;Dbxref=GenBank:WP_043139382.1;Name=WP_043139382.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019456385.1;locus_tag=IY40_RS10670;product=hypothetical protein;protein_id=WP_043139382.1;transl_table=11 NZ_JPQY01000013.1 RefSeq gene 179704 180042 . - . ID=gene-IY40_RS25230;Name=IY40_RS25230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS25230 NZ_JPQY01000013.1 Protein Homology CDS 179704 180042 . - 0 ID=cds-WP_072008249.1;Parent=gene-IY40_RS25230;Dbxref=GenBank:WP_072008249.1;Name=WP_072008249.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013060288.1;locus_tag=IY40_RS25230;product=hypothetical protein;protein_id=WP_072008249.1;transl_table=11 NZ_JPQY01000013.1 RefSeq gene 180603 181502 . - . ID=gene-IY40_RS25235;Name=IY40_RS25235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS25235 NZ_JPQY01000013.1 Protein Homology CDS 180603 181502 . - 0 ID=cds-WP_072008251.1;Parent=gene-IY40_RS25235;Dbxref=GenBank:WP_072008251.1;Name=WP_072008251.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016260104.1;locus_tag=IY40_RS25235;product=integrase domain-containing protein;protein_id=WP_072008251.1;transl_table=11 NZ_JPQY01000013.1 RefSeq pseudogene 183094 183393 . + . ID=gene-IY40_RS10680;Name=IY40_RS10680;end_range=183393,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IY40_RS10680;old_locus_tag=IY40_10845;partial=true;pseudo=true NZ_JPQY01000013.1 Protein Homology CDS 183094 183393 . + 0 ID=cds-IY40_RS10680;Parent=gene-IY40_RS10680;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=183393,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611475.1;locus_tag=IY40_RS10680;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_JPQY01000013.1 RefSeq pseudogene 183478 183792 . + . ID=gene-IY40_RS25245;Name=IY40_RS25245;end_range=183792,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IY40_RS25245;partial=true;pseudo=true NZ_JPQY01000013.1 Protein Homology CDS 183478 183792 . + 0 ID=cds-IY40_RS25245;Parent=gene-IY40_RS25245;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=183792,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020324562.1;locus_tag=IY40_RS25245;partial=true;product=DDE-type integrase/transposase/recombinase;pseudo=true;transl_table=11 NZ_JPQY01000013.1 RefSeq gene 183905 185239 . + . ID=gene-IY40_RS10685;Name=IY40_RS10685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS10685;old_locus_tag=IY40_10850 NZ_JPQY01000013.1 GeneMarkS-2+ CDS 183905 185239 . + 0 ID=cds-WP_043139387.1;Parent=gene-IY40_RS10685;Dbxref=GenBank:WP_043139387.1;Name=WP_043139387.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IY40_RS10685;product=PI-PLC domain-containing protein;protein_id=WP_043139387.1;transl_table=11 NZ_JPQY01000013.1 RefSeq pseudogene 185318 185592 . - . ID=gene-IY40_RS10690;Name=IY40_RS10690;end_range=185592,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IY40_RS10690;old_locus_tag=IY40_10855;partial=true;pseudo=true NZ_JPQY01000013.1 Protein Homology CDS 185318 185592 . - 0 ID=cds-IY40_RS10690;Parent=gene-IY40_RS10690;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=185592,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_047389784.1;locus_tag=IY40_RS10690;partial=true;product=DDE-type integrase/transposase/recombinase;pseudo=true;transl_table=11 NZ_JPQY01000013.1 RefSeq gene 185667 186718 . + . ID=gene-IY40_RS25735;Name=IY40_RS25735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS25735 NZ_JPQY01000013.1 Protein Homology CDS 185667 185928 . + 0 ID=cds-WP_152561293.1;Parent=gene-IY40_RS25735;Dbxref=GenBank:WP_152561293.1;Name=WP_152561293.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013365374.1;locus_tag=IY40_RS25735;product=IS3 family transposase;protein_id=WP_152561293.1;transl_table=11 NZ_JPQY01000013.1 Protein Homology CDS 185928 186718 . + 2 ID=cds-WP_152561293.1;Parent=gene-IY40_RS25735;Dbxref=GenBank:WP_152561293.1;Name=WP_152561293.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013365374.1;locus_tag=IY40_RS25735;product=IS3 family transposase;protein_id=WP_152561293.1;transl_table=11 NZ_JPQY01000013.1 RefSeq gene 186822 187379 . + . ID=gene-IY40_RS10705;Name=IY40_RS10705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS10705;old_locus_tag=IY40_10870 NZ_JPQY01000013.1 Protein Homology CDS 186822 187379 . + 0 ID=cds-WP_043139392.1;Parent=gene-IY40_RS10705;Dbxref=GenBank:WP_043139392.1;Name=WP_043139392.1;Ontology_term=GO:0006310,GO:0015074,GO:0000150,GO:0003677;gbkey=CDS;go_function=DNA strand exchange activity|0000150||IEA,DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016193187.1;locus_tag=IY40_RS10705;product=recombinase family protein;protein_id=WP_043139392.1;transl_table=11 NZ_JPQY01000013.1 RefSeq gene 187515 188420 . + . ID=gene-IY40_RS10710;Name=IY40_RS10710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS10710 NZ_JPQY01000013.1 Protein Homology CDS 187515 188420 . + 0 ID=cds-WP_050505153.1;Parent=gene-IY40_RS10710;Dbxref=GenBank:WP_050505153.1;Name=WP_050505153.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001180115.1;locus_tag=IY40_RS10710;product=hypothetical protein;protein_id=WP_050505153.1;transl_table=11 NZ_JPQY01000013.1 RefSeq pseudogene 188523 188751 . + . ID=gene-IY40_RS26700;Name=IY40_RS26700;end_range=188751,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IY40_RS26700;partial=true;pseudo=true NZ_JPQY01000013.1 Protein Homology CDS 188523 188751 . + 0 ID=cds-IY40_RS26700;Parent=gene-IY40_RS26700;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=188751,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005176946.1;locus_tag=IY40_RS26700;partial=true;product=IS256 family transposase;pseudo=true;transl_table=11 NZ_JPQY01000013.1 RefSeq gene 189048 189830 . + . ID=gene-IY40_RS10715;Name=IY40_RS10715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS10715;old_locus_tag=IY40_10880 NZ_JPQY01000013.1 GeneMarkS-2+ CDS 189048 189830 . + 0 ID=cds-WP_152561294.1;Parent=gene-IY40_RS10715;Dbxref=GenBank:WP_152561294.1;Name=WP_152561294.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IY40_RS10715;product=hypothetical protein;protein_id=WP_152561294.1;transl_table=11 NZ_JPQY01000013.1 RefSeq gene 190067 190852 . - . ID=gene-IY40_RS10720;Name=IY40_RS10720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS10720;old_locus_tag=IY40_10890 NZ_JPQY01000013.1 Protein Homology CDS 190067 190852 . - 0 ID=cds-WP_043139399.1;Parent=gene-IY40_RS10720;Dbxref=GenBank:WP_043139399.1;Name=WP_043139399.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006319224.1;locus_tag=IY40_RS10720;product=Lnb N-terminal periplasmic domain-containing protein;protein_id=WP_043139399.1;transl_table=11 NZ_JPQY01000013.1 RefSeq gene 190858 192258 . - . ID=gene-IY40_RS10725;Name=IY40_RS10725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS10725;old_locus_tag=IY40_10895 NZ_JPQY01000013.1 Protein Homology CDS 190858 192258 . - 0 ID=cds-WP_043139402.1;Parent=gene-IY40_RS10725;Dbxref=GenBank:WP_043139402.1;Name=WP_043139402.1;Ontology_term=GO:0009268;gbkey=CDS;go_process=response to pH|0009268||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006319225.1;locus_tag=IY40_RS10725;product=HdeD family acid-resistance protein;protein_id=WP_043139402.1;transl_table=11 NZ_JPQY01000013.1 RefSeq gene 192987 193223 . + . ID=gene-IY40_RS25940;Name=IY40_RS25940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS25940 NZ_JPQY01000013.1 GeneMarkS-2+ CDS 192987 193223 . + 0 ID=cds-WP_152561296.1;Parent=gene-IY40_RS25940;Dbxref=GenBank:WP_152561296.1;Name=WP_152561296.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IY40_RS25940;product=hypothetical protein;protein_id=WP_152561296.1;transl_table=11 NZ_JPQY01000013.1 RefSeq gene 193308 193733 . - . ID=gene-IY40_RS10730;Name=IY40_RS10730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS10730;old_locus_tag=IY40_10900 NZ_JPQY01000013.1 GeneMarkS-2+ CDS 193308 193733 . - 0 ID=cds-WP_152561297.1;Parent=gene-IY40_RS10730;Dbxref=GenBank:WP_152561297.1;Name=WP_152561297.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IY40_RS10730;product=hypothetical protein;protein_id=WP_152561297.1;transl_table=11 NZ_JPQY01000013.1 RefSeq gene 193809 197243 . - . ID=gene-IY40_RS24810;Name=IY40_RS24810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS24810 NZ_JPQY01000013.1 Protein Homology CDS 193809 197243 . - 0 ID=cds-WP_161781784.1;Parent=gene-IY40_RS24810;Dbxref=GenBank:WP_161781784.1;Name=WP_161781784.1;Ontology_term=GO:0046903,GO:0015474,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=autotransporter activity|0015474||IEA;go_process=secretion|0046903||IEA;inference=COORDINATES: protein motif:HMM:TIGR01414.1;locus_tag=IY40_RS24810;product=autotransporter outer membrane beta-barrel domain-containing protein;protein_id=WP_161781784.1;transl_table=11 NZ_JPQY01000013.1 RefSeq pseudogene 198128 198601 . - . ID=gene-IY40_RS25255;Name=IY40_RS25255;end_range=198601,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IY40_RS25255;partial=true;pseudo=true NZ_JPQY01000013.1 Protein Homology CDS 198128 198601 . - 0 ID=cds-IY40_RS25255;Parent=gene-IY40_RS25255;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006310,GO:0015074,GO:0032196,GO:0003677,GO:0004803;end_range=198601,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA,transposition|0032196||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020324562.1;locus_tag=IY40_RS25255;partial=true;product=IS6 family transposase;pseudo=true;transl_table=11 NZ_JPQY01000013.1 RefSeq gene 198671 199519 . - . ID=gene-IY40_RS10745;Name=IY40_RS10745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS10745;old_locus_tag=IY40_10915 NZ_JPQY01000013.1 GeneMarkS-2+ CDS 198671 199519 . - 0 ID=cds-WP_152561298.1;Parent=gene-IY40_RS10745;Dbxref=GenBank:WP_152561298.1;Name=WP_152561298.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IY40_RS10745;product=hypothetical protein;protein_id=WP_152561298.1;transl_table=11 NZ_JPQY01000013.1 RefSeq pseudogene 199734 200214 . - . ID=gene-IY40_RS25260;Name=IY40_RS25260;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IY40_RS25260;old_locus_tag=IY40_10920;pseudo=true NZ_JPQY01000013.1 Protein Homology CDS 199734 200214 . - 0 ID=cds-IY40_RS25260;Parent=gene-IY40_RS25260;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008910093.1;locus_tag=IY40_RS25260;product=DDE-type integrase/transposase/recombinase;pseudo=true;transl_table=11 NZ_JPQY01000013.1 RefSeq gene 200399 201322 . - . ID=gene-IY40_RS10760;Name=IY40_RS10760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS10760;old_locus_tag=IY40_10925 NZ_JPQY01000013.1 GeneMarkS-2+ CDS 200399 201322 . - 0 ID=cds-WP_043139414.1;Parent=gene-IY40_RS10760;Dbxref=GenBank:WP_043139414.1;Name=WP_043139414.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IY40_RS10760;product=hypothetical protein;protein_id=WP_043139414.1;transl_table=11 NZ_JPQY01000013.1 RefSeq gene 201753 202253 . - . ID=gene-IY40_RS10765;Name=IY40_RS10765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS10765;old_locus_tag=IY40_10930 NZ_JPQY01000013.1 Protein Homology CDS 201753 202253 . - 0 ID=cds-WP_043139417.1;Parent=gene-IY40_RS10765;Dbxref=GenBank:WP_043139417.1;Name=WP_043139417.1;Ontology_term=GO:0016790,GO:0047617;gbkey=CDS;go_function=thiolester hydrolase activity|0016790||IEA,fatty acyl-CoA hydrolase activity|0047617||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004963918.1;locus_tag=IY40_RS10765;product=PaaI family thioesterase;protein_id=WP_043139417.1;transl_table=11 NZ_JPQY01000013.1 RefSeq gene 202278 202691 . - . ID=gene-IY40_RS10770;Name=IY40_RS10770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS10770;old_locus_tag=IY40_10935 NZ_JPQY01000013.1 GeneMarkS-2+ CDS 202278 202691 . - 0 ID=cds-WP_043139420.1;Parent=gene-IY40_RS10770;Dbxref=GenBank:WP_043139420.1;Name=WP_043139420.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IY40_RS10770;product=hypothetical protein;protein_id=WP_043139420.1;transl_table=11 NZ_JPQY01000013.1 RefSeq gene 203044 203982 . - . ID=gene-IY40_RS25945;Name=IY40_RS25945;end_range=203982,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS25945;partial=true NZ_JPQY01000013.1 GeneMarkS-2+ CDS 203044 203982 . - 0 ID=cds-WP_235211374.1;Parent=gene-IY40_RS25945;Dbxref=GenBank:WP_235211374.1;Name=WP_235211374.1;end_range=203982,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IY40_RS25945;partial=true;product=hypothetical protein;protein_id=WP_235211374.1;transl_table=11 ##sequence-region NZ_JPQY01000014.1 1 36645 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=615 NZ_JPQY01000014.1 RefSeq region 1 36645 . + . ID=NZ_JPQY01000014.1:1..36645;Dbxref=taxon:615;collected-by=Mahloro H. Serepa%3B Vincent M. Gray;collection-date=2013-04-11;country=South Africa: North West Province;gbkey=Src;genome=genomic;identified-by=Mahloro H. Serepa%3B Vincent M. Gray;isolation-source=entomopathogenic nematode Oscheius sp. MCB living in soil;mol_type=genomic DNA;nat-host=Oscheius sp. MCB;strain=MCB NZ_JPQY01000014.1 RefSeq gene 60 1184 . + . ID=gene-IY40_RS25265;Name=IY40_RS25265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS25265 NZ_JPQY01000014.1 Protein Homology CDS 60 1184 . + 0 ID=cds-WP_072008253.1;Parent=gene-IY40_RS25265;Dbxref=GenBank:WP_072008253.1;Name=WP_072008253.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001396170.1;locus_tag=IY40_RS25265;product=tyrosine-type recombinase/integrase;protein_id=WP_072008253.1;transl_table=11 NZ_JPQY01000014.1 RefSeq gene 1296 1757 . + . ID=gene-IY40_RS10775;Name=IY40_RS10775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS10775;old_locus_tag=IY40_10950 NZ_JPQY01000014.1 Protein Homology CDS 1296 1757 . + 0 ID=cds-WP_043139475.1;Parent=gene-IY40_RS10775;Dbxref=GenBank:WP_043139475.1;Name=WP_043139475.1;Note=Members of this family include DotD of type IVB secretion systems and TraH of plasmid conjugative plasmid systems%2C both lipoproteins.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004720812.1;locus_tag=IY40_RS10775;product=DotD/TraH family lipoprotein;protein_id=WP_043139475.1;transl_table=11 NZ_JPQY01000014.1 RefSeq gene 1754 2548 . + . ID=gene-IY40_RS10780;Name=IY40_RS10780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS10780;old_locus_tag=IY40_10955 NZ_JPQY01000014.1 Protein Homology CDS 1754 2548 . + 0 ID=cds-WP_043139477.1;Parent=gene-IY40_RS10780;Dbxref=GenBank:WP_043139477.1;Name=WP_043139477.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017374630.1;locus_tag=IY40_RS10780;product=type IV secretory system conjugative DNA transfer family protein;protein_id=WP_043139477.1;transl_table=11 NZ_JPQY01000014.1 RefSeq gene 2545 3702 . + . ID=gene-IY40_RS10785;Name=traJ;gbkey=Gene;gene=traJ;gene_biotype=protein_coding;locus_tag=IY40_RS10785;old_locus_tag=IY40_10960 NZ_JPQY01000014.1 Protein Homology CDS 2545 3702 . + 0 ID=cds-WP_043139480.1;Parent=gene-IY40_RS10785;Dbxref=GenBank:WP_043139480.1;Name=WP_043139480.1;gbkey=CDS;gene=traJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004720814.1;locus_tag=IY40_RS10785;product=plasmid transfer ATPase TraJ;protein_id=WP_043139480.1;transl_table=11 NZ_JPQY01000014.1 RefSeq gene 3699 3959 . + . ID=gene-IY40_RS10790;Name=icmT;gbkey=Gene;gene=icmT;gene_biotype=protein_coding;locus_tag=IY40_RS10790;old_locus_tag=IY40_10965 NZ_JPQY01000014.1 Protein Homology CDS 3699 3959 . + 0 ID=cds-WP_043139483.1;Parent=gene-IY40_RS10790;Dbxref=GenBank:WP_043139483.1;Name=WP_043139483.1;gbkey=CDS;gene=icmT;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017374628.1;locus_tag=IY40_RS10790;product=IcmT/TraK family protein;protein_id=WP_043139483.1;transl_table=11 NZ_JPQY01000014.1 RefSeq gene 3974 7273 . + . ID=gene-IY40_RS10795;Name=IY40_RS10795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS10795;old_locus_tag=IY40_10970 NZ_JPQY01000014.1 Protein Homology CDS 3974 7273 . + 0 ID=cds-WP_043139486.1;Parent=gene-IY40_RS10795;Dbxref=GenBank:WP_043139486.1;Name=WP_043139486.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF037421.6;locus_tag=IY40_RS10795;product=LPD7 domain-containing protein;protein_id=WP_043139486.1;transl_table=11 NZ_JPQY01000014.1 RefSeq gene 7281 7760 . + . ID=gene-IY40_RS25270;Name=IY40_RS25270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS25270 NZ_JPQY01000014.1 GeneMarkS-2+ CDS 7281 7760 . + 0 ID=cds-WP_072008254.1;Parent=gene-IY40_RS25270;Dbxref=GenBank:WP_072008254.1;Name=WP_072008254.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IY40_RS25270;product=hypothetical protein;protein_id=WP_072008254.1;transl_table=11 NZ_JPQY01000014.1 RefSeq gene 7777 8493 . + . ID=gene-IY40_RS10800;Name=IY40_RS10800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS10800;old_locus_tag=IY40_10975 NZ_JPQY01000014.1 Protein Homology CDS 7777 8493 . + 0 ID=cds-WP_043139489.1;Parent=gene-IY40_RS10800;Dbxref=GenBank:WP_043139489.1;Name=WP_043139489.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004720818.1;locus_tag=IY40_RS10800;product=DotI/IcmL/TraM family protein;protein_id=WP_043139489.1;transl_table=11 NZ_JPQY01000014.1 RefSeq gene 8512 9525 . + . ID=gene-IY40_RS10805;Name=IY40_RS10805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS10805;old_locus_tag=IY40_10980 NZ_JPQY01000014.1 Protein Homology CDS 8512 9525 . + 0 ID=cds-WP_072008255.1;Parent=gene-IY40_RS10805;Dbxref=GenBank:WP_072008255.1;Name=WP_072008255.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017374625.1;locus_tag=IY40_RS10805;product=DotH/IcmK family type IV secretion protein;protein_id=WP_072008255.1;transl_table=11 NZ_JPQY01000014.1 RefSeq gene 9528 10793 . + . ID=gene-IY40_RS10810;Name=traO;gbkey=Gene;gene=traO;gene_biotype=protein_coding;locus_tag=IY40_RS10810;old_locus_tag=IY40_10985 NZ_JPQY01000014.1 Protein Homology CDS 9528 10793 . + 0 ID=cds-WP_043139492.1;Parent=gene-IY40_RS10810;Dbxref=GenBank:WP_043139492.1;Name=WP_043139492.1;gbkey=CDS;gene=traO;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004720823.1;locus_tag=IY40_RS10810;product=conjugal transfer protein TraO;protein_id=WP_043139492.1;transl_table=11 NZ_JPQY01000014.1 RefSeq gene 10803 11618 . + . ID=gene-IY40_RS10815;Name=IY40_RS10815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS10815;old_locus_tag=IY40_10990 NZ_JPQY01000014.1 GeneMarkS-2+ CDS 10803 11618 . + 0 ID=cds-WP_043139495.1;Parent=gene-IY40_RS10815;Dbxref=GenBank:WP_043139495.1;Name=WP_043139495.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IY40_RS10815;product=hypothetical protein;protein_id=WP_043139495.1;transl_table=11 NZ_JPQY01000014.1 RefSeq gene 11618 12145 . + . ID=gene-IY40_RS10820;Name=traQ;gbkey=Gene;gene=traQ;gene_biotype=protein_coding;locus_tag=IY40_RS10820;old_locus_tag=IY40_10995 NZ_JPQY01000014.1 Protein Homology CDS 11618 12145 . + 0 ID=cds-WP_043139498.1;Parent=gene-IY40_RS10820;Dbxref=GenBank:WP_043139498.1;Name=WP_043139498.1;gbkey=CDS;gene=traQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017374622.1;locus_tag=IY40_RS10820;product=conjugal transfer protein TraQ;protein_id=WP_043139498.1;transl_table=11 NZ_JPQY01000014.1 RefSeq gene 12170 12553 . + . ID=gene-IY40_RS10825;Name=IY40_RS10825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS10825;old_locus_tag=IY40_11000 NZ_JPQY01000014.1 Protein Homology CDS 12170 12553 . + 0 ID=cds-WP_043139501.1;Parent=gene-IY40_RS10825;Dbxref=GenBank:WP_043139501.1;Name=WP_043139501.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004720828.1;locus_tag=IY40_RS10825;product=DUF6750 family protein;protein_id=WP_043139501.1;transl_table=11 NZ_JPQY01000014.1 RefSeq gene 12622 12828 . + . ID=gene-IY40_RS10830;Name=IY40_RS10830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS10830;old_locus_tag=IY40_11005 NZ_JPQY01000014.1 GeneMarkS-2+ CDS 12622 12828 . + 0 ID=cds-WP_043139504.1;Parent=gene-IY40_RS10830;Dbxref=GenBank:WP_043139504.1;Name=WP_043139504.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IY40_RS10830;product=hypothetical protein;protein_id=WP_043139504.1;transl_table=11 NZ_JPQY01000014.1 RefSeq gene 12822 13775 . + . ID=gene-IY40_RS10835;Name=IY40_RS10835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS10835;old_locus_tag=IY40_11010 NZ_JPQY01000014.1 GeneMarkS-2+ CDS 12822 13775 . + 0 ID=cds-WP_043139507.1;Parent=gene-IY40_RS10835;Dbxref=GenBank:WP_043139507.1;Name=WP_043139507.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IY40_RS10835;product=hypothetical protein;protein_id=WP_043139507.1;transl_table=11 NZ_JPQY01000014.1 RefSeq gene 13798 16875 . + . ID=gene-IY40_RS10840;Name=IY40_RS10840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS10840;old_locus_tag=IY40_11015 NZ_JPQY01000014.1 Protein Homology CDS 13798 16875 . + 0 ID=cds-WP_043139510.1;Parent=gene-IY40_RS10840;Dbxref=GenBank:WP_043139510.1;Name=WP_043139510.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017374619.1;locus_tag=IY40_RS10840;product=conjugal transfer protein;protein_id=WP_043139510.1;transl_table=11 NZ_JPQY01000014.1 RefSeq gene 16889 18085 . + . ID=gene-IY40_RS10845;Name=traW;gbkey=Gene;gene=traW;gene_biotype=protein_coding;locus_tag=IY40_RS10845;old_locus_tag=IY40_11020 NZ_JPQY01000014.1 Protein Homology CDS 16889 18085 . + 0 ID=cds-WP_043139513.1;Parent=gene-IY40_RS10845;Dbxref=GenBank:WP_043139513.1;Name=WP_043139513.1;gbkey=CDS;gene=traW;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017374618.1;locus_tag=IY40_RS10845;product=conjugal transfer protein TraW;protein_id=WP_043139513.1;transl_table=11 NZ_JPQY01000014.1 RefSeq gene 18082 18594 . + . ID=gene-IY40_RS10850;Name=traX;gbkey=Gene;gene=traX;gene_biotype=protein_coding;locus_tag=IY40_RS10850;old_locus_tag=IY40_11025 NZ_JPQY01000014.1 Protein Homology CDS 18082 18594 . + 0 ID=cds-WP_043139516.1;Parent=gene-IY40_RS10850;Dbxref=GenBank:WP_043139516.1;Name=WP_043139516.1;gbkey=CDS;gene=traX;inference=COORDINATES: protein motif:HMM:NF033887.1;locus_tag=IY40_RS10850;product=conjugal transfer protein TraX;protein_id=WP_043139516.1;transl_table=11 NZ_JPQY01000014.1 RefSeq gene 18648 20795 . + . ID=gene-IY40_RS10855;Name=IY40_RS10855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS10855;old_locus_tag=IY40_11030 NZ_JPQY01000014.1 Protein Homology CDS 18648 20795 . + 0 ID=cds-WP_043139521.1;Parent=gene-IY40_RS10855;Dbxref=GenBank:WP_043139521.1;Name=WP_043139521.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004720832.1;locus_tag=IY40_RS10855;product=DotA/TraY family protein;protein_id=WP_043139521.1;transl_table=11 NZ_JPQY01000014.1 RefSeq gene 20884 21135 . + . ID=gene-IY40_RS10860;Name=IY40_RS10860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS10860;old_locus_tag=IY40_11035 NZ_JPQY01000014.1 Protein Homology CDS 20884 21135 . + 0 ID=cds-WP_043139525.1;Parent=gene-IY40_RS10860;Dbxref=GenBank:WP_043139525.1;Name=WP_043139525.1;Ontology_term=GO:0006355,GO:0045927,GO:0003677,GO:0097351,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=DNA binding|0003677||IEA,toxin sequestering activity|0097351||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,positive regulation of growth|0045927||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001595120.1;locus_tag=IY40_RS10860;product=type II toxin-antitoxin system Phd/YefM family antitoxin;protein_id=WP_043139525.1;transl_table=11 NZ_JPQY01000014.1 RefSeq gene 21132 21419 . + . ID=gene-IY40_RS10865;Name=IY40_RS10865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS10865;old_locus_tag=IY40_11040 NZ_JPQY01000014.1 Protein Homology CDS 21132 21419 . + 0 ID=cds-WP_043139530.1;Parent=gene-IY40_RS10865;Dbxref=GenBank:WP_043139530.1;Name=WP_043139530.1;Ontology_term=GO:0017148,GO:0004521,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=RNA endonuclease activity|0004521||IEA;go_process=negative regulation of translation|0017148||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020317119.1;locus_tag=IY40_RS10865;product=type II toxin-antitoxin system RelE family toxin;protein_id=WP_043139530.1;transl_table=11 NZ_JPQY01000014.1 RefSeq gene 21437 22117 . + . ID=gene-IY40_RS10870;Name=excA;gbkey=Gene;gene=excA;gene_biotype=protein_coding;locus_tag=IY40_RS10870 NZ_JPQY01000014.1 Protein Homology CDS 21437 22117 . + 0 ID=cds-WP_043139535.1;Parent=gene-IY40_RS10870;Dbxref=GenBank:WP_043139535.1;Name=WP_043139535.1;gbkey=CDS;gene=excA;inference=COORDINATES: protein motif:HMM:NF033891.1;locus_tag=IY40_RS10870;product=plasmid IncI1-type surface exclusion protein ExcA;protein_id=WP_043139535.1;transl_table=11 NZ_JPQY01000014.1 RefSeq gene 22213 23475 . + . ID=gene-IY40_RS10875;Name=IY40_RS10875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS10875;old_locus_tag=IY40_11050 NZ_JPQY01000014.1 Protein Homology CDS 22213 23475 . + 0 ID=cds-WP_043139538.1;Parent=gene-IY40_RS10875;Dbxref=GenBank:WP_043139538.1;Name=WP_043139538.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004720838.1;locus_tag=IY40_RS10875;product=secretion/conjugation apparatus DotM-related subunit;protein_id=WP_043139538.1;transl_table=11 NZ_JPQY01000014.1 RefSeq gene 23480 24544 . + . ID=gene-IY40_RS25745;Name=IY40_RS25745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS25745 NZ_JPQY01000014.1 GeneMarkS-2+ CDS 23480 24544 . + 0 ID=cds-WP_080287132.1;Parent=gene-IY40_RS25745;Dbxref=GenBank:WP_080287132.1;Name=WP_080287132.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IY40_RS25745;product=DsbC family protein;protein_id=WP_080287132.1;transl_table=11 NZ_JPQY01000014.1 RefSeq gene 24555 26885 . + . ID=gene-IY40_RS10890;Name=trbC;gbkey=Gene;gene=trbC;gene_biotype=protein_coding;locus_tag=IY40_RS10890;old_locus_tag=IY40_11065 NZ_JPQY01000014.1 Protein Homology CDS 24555 26885 . + 0 ID=cds-WP_043139545.1;Parent=gene-IY40_RS10890;Dbxref=GenBank:WP_043139545.1;Name=WP_043139545.1;gbkey=CDS;gene=trbC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004720841.1;locus_tag=IY40_RS10890;product=F-type conjugative transfer protein TrbC;protein_id=WP_043139545.1;transl_table=11 NZ_JPQY01000014.1 RefSeq gene 26845 27324 . + . ID=gene-IY40_RS25280;Name=IY40_RS25280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS25280;old_locus_tag=IY40_11070 NZ_JPQY01000014.1 Protein Homology CDS 26845 27324 . + 0 ID=cds-WP_231104108.1;Parent=gene-IY40_RS25280;Dbxref=GenBank:WP_231104108.1;Name=WP_231104108.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012666958.1;locus_tag=IY40_RS25280;product=phospholipase D family nuclease;protein_id=WP_231104108.1;transl_table=11 NZ_JPQY01000014.1 RefSeq gene 27390 28403 . - . ID=gene-IY40_RS10895;Name=IY40_RS10895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS10895;old_locus_tag=IY40_11075 NZ_JPQY01000014.1 Protein Homology CDS 27390 28403 . - 0 ID=cds-WP_043139548.1;Parent=gene-IY40_RS10895;Dbxref=GenBank:WP_043139548.1;Name=WP_043139548.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343644.1;locus_tag=IY40_RS10895;product=hypothetical protein;protein_id=WP_043139548.1;transl_table=11 NZ_JPQY01000014.1 RefSeq gene 28430 30361 . - . ID=gene-IY40_RS10900;Name=traI;gbkey=Gene;gene=traI;gene_biotype=protein_coding;locus_tag=IY40_RS10900 NZ_JPQY01000014.1 Protein Homology CDS 28430 30361 . - 0 ID=cds-WP_050505158.1;Parent=gene-IY40_RS10900;Dbxref=GenBank:WP_050505158.1;Name=WP_050505158.1;gbkey=CDS;gene=traI;inference=COORDINATES: protein motif:HMM:NF041893.1;locus_tag=IY40_RS10900;product=TraI/MobA(P) family conjugative relaxase;protein_id=WP_050505158.1;transl_table=11 NZ_JPQY01000014.1 RefSeq gene 30363 30707 . - . ID=gene-IY40_RS10905;Name=mobA;gbkey=Gene;gene=mobA;gene_biotype=protein_coding;locus_tag=IY40_RS10905;old_locus_tag=IY40_11085 NZ_JPQY01000014.1 Protein Homology CDS 30363 30707 . - 0 ID=cds-WP_043139551.1;Parent=gene-IY40_RS10905;Dbxref=GenBank:WP_043139551.1;Name=WP_043139551.1;Ontology_term=GO:0006355;gbkey=CDS;gene=mobA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004720848.1;locus_tag=IY40_RS10905;product=plasmid mobilization protein MobA;protein_id=WP_043139551.1;transl_table=11 NZ_JPQY01000014.1 RefSeq gene 30988 31311 . + . ID=gene-IY40_RS10910;Name=IY40_RS10910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS10910;old_locus_tag=IY40_11090 NZ_JPQY01000014.1 Protein Homology CDS 30988 31311 . + 0 ID=cds-WP_043139554.1;Parent=gene-IY40_RS10910;Dbxref=GenBank:WP_043139554.1;Name=WP_043139554.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000130127.1;locus_tag=IY40_RS10910;product=hypothetical protein;protein_id=WP_043139554.1;transl_table=11 NZ_JPQY01000014.1 RefSeq gene 31474 32307 . - . ID=gene-IY40_RS10915;Name=IY40_RS10915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS10915;old_locus_tag=IY40_11095 NZ_JPQY01000014.1 Protein Homology CDS 31474 32307 . - 0 ID=cds-WP_043139558.1;Parent=gene-IY40_RS10915;Dbxref=GenBank:WP_043139558.1;Name=WP_043139558.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000113358.1;locus_tag=IY40_RS10915;product=DUF932 domain-containing protein;protein_id=WP_043139558.1;transl_table=11 NZ_JPQY01000014.1 RefSeq gene 32737 33306 . - . ID=gene-IY40_RS26365;Name=IY40_RS26365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS26365 NZ_JPQY01000014.1 Protein Homology CDS 32737 33306 . - 0 ID=cds-WP_050505159.1;Parent=gene-IY40_RS26365;Dbxref=GenBank:WP_050505159.1;Name=WP_050505159.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF039307.6;locus_tag=IY40_RS26365;product=DUF5983 family protein;protein_id=WP_050505159.1;transl_table=11 NZ_JPQY01000014.1 RefSeq gene 33362 33604 . - . ID=gene-IY40_RS10925;Name=IY40_RS10925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS10925;old_locus_tag=IY40_11105 NZ_JPQY01000014.1 GeneMarkS-2+ CDS 33362 33604 . - 0 ID=cds-WP_043139560.1;Parent=gene-IY40_RS10925;Dbxref=GenBank:WP_043139560.1;Name=WP_043139560.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IY40_RS10925;product=hypothetical protein;protein_id=WP_043139560.1;transl_table=11 NZ_JPQY01000014.1 RefSeq gene 33689 34111 . - . ID=gene-IY40_RS24820;Name=IY40_RS24820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS24820 NZ_JPQY01000014.1 GeneMarkS-2+ CDS 33689 34111 . - 0 ID=cds-WP_050505160.1;Parent=gene-IY40_RS24820;Dbxref=GenBank:WP_050505160.1;Name=WP_050505160.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IY40_RS24820;product=hypothetical protein;protein_id=WP_050505160.1;transl_table=11 NZ_JPQY01000014.1 RefSeq gene 34713 35027 . + . ID=gene-IY40_RS25755;Name=IY40_RS25755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS25755 NZ_JPQY01000014.1 Protein Homology CDS 34713 35027 . + 0 ID=cds-WP_050505161.1;Parent=gene-IY40_RS25755;Dbxref=GenBank:WP_050505161.1;Name=WP_050505161.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000148351.1;locus_tag=IY40_RS25755;product=helix-turn-helix domain-containing protein;protein_id=WP_050505161.1;transl_table=11 NZ_JPQY01000014.1 RefSeq gene 35307 36134 . - . ID=gene-IY40_RS10940;Name=IY40_RS10940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS10940;old_locus_tag=IY40_11120 NZ_JPQY01000014.1 Protein Homology CDS 35307 36134 . - 0 ID=cds-WP_043139563.1;Parent=gene-IY40_RS10940;Dbxref=GenBank:WP_043139563.1;Name=WP_043139563.1;Ontology_term=GO:0003677,GO:0008170;gbkey=CDS;go_function=DNA binding|0003677||IEA,N-methyltransferase activity|0008170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000080850.1;locus_tag=IY40_RS10940;product=N-6 DNA methylase;protein_id=WP_043139563.1;transl_table=11 NZ_JPQY01000014.1 RefSeq gene 36201 36545 . - . ID=gene-IY40_RS10945;Name=IY40_RS10945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS10945;old_locus_tag=IY40_11125 NZ_JPQY01000014.1 Protein Homology CDS 36201 36545 . - 0 ID=cds-WP_043139567.1;Parent=gene-IY40_RS10945;Dbxref=GenBank:WP_043139567.1;Name=WP_043139567.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001403163.1;locus_tag=IY40_RS10945;product=hypothetical protein;protein_id=WP_043139567.1;transl_table=11 ##sequence-region NZ_JPQY01000015.1 1 87181 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=615 NZ_JPQY01000015.1 RefSeq region 1 87181 . + . ID=NZ_JPQY01000015.1:1..87181;Dbxref=taxon:615;collected-by=Mahloro H. Serepa%3B Vincent M. Gray;collection-date=2013-04-11;country=South Africa: North West Province;gbkey=Src;genome=genomic;identified-by=Mahloro H. Serepa%3B Vincent M. Gray;isolation-source=entomopathogenic nematode Oscheius sp. MCB living in soil;mol_type=genomic DNA;nat-host=Oscheius sp. MCB;strain=MCB NZ_JPQY01000015.1 RefSeq gene 77 192 . + . ID=gene-IY40_RS10950;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=IY40_RS10950;old_locus_tag=IY40_11130 NZ_JPQY01000015.1 cmsearch rRNA 77 192 . + . ID=rna-IY40_RS10950;Parent=gene-IY40_RS10950;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=IY40_RS10950;product=5S ribosomal RNA NZ_JPQY01000015.1 cmsearch exon 77 192 . + . ID=exon-IY40_RS10950-1;Parent=rna-IY40_RS10950;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=IY40_RS10950;product=5S ribosomal RNA NZ_JPQY01000015.1 RefSeq gene 207 282 . + . ID=gene-IY40_RS10955;Name=IY40_RS10955;gbkey=Gene;gene_biotype=tRNA;locus_tag=IY40_RS10955;old_locus_tag=IY40_11135 NZ_JPQY01000015.1 tRNAscan-SE tRNA 207 282 . + . ID=rna-IY40_RS10955;Parent=gene-IY40_RS10955;anticodon=(pos:240..242);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=IY40_RS10955;product=tRNA-Thr NZ_JPQY01000015.1 tRNAscan-SE exon 207 282 . + . ID=exon-IY40_RS10955-1;Parent=rna-IY40_RS10955;anticodon=(pos:240..242);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=IY40_RS10955;product=tRNA-Thr NZ_JPQY01000015.1 RefSeq gene 329 444 . + . ID=gene-IY40_RS10960;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=IY40_RS10960;old_locus_tag=IY40_11140 NZ_JPQY01000015.1 cmsearch rRNA 329 444 . + . ID=rna-IY40_RS10960;Parent=gene-IY40_RS10960;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=IY40_RS10960;product=5S ribosomal RNA NZ_JPQY01000015.1 cmsearch exon 329 444 . + . ID=exon-IY40_RS10960-1;Parent=rna-IY40_RS10960;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=IY40_RS10960;product=5S ribosomal RNA NZ_JPQY01000015.1 RefSeq gene 824 1753 . + . ID=gene-IY40_RS10970;Name=metA;gbkey=Gene;gene=metA;gene_biotype=protein_coding;locus_tag=IY40_RS10970;old_locus_tag=IY40_11150 NZ_JPQY01000015.1 Protein Homology CDS 824 1753 . + 0 ID=cds-WP_043139603.1;Parent=gene-IY40_RS10970;Dbxref=GenBank:WP_043139603.1;Name=WP_043139603.1;Ontology_term=GO:0019281,GO:0008899,GO:0005737;gbkey=CDS;gene=metA;go_component=cytoplasm|0005737||IEA;go_function=homoserine O-succinyltransferase activity|0008899||IEA;go_process=L-methionine biosynthetic process from homoserine via O-succinyl-L-homoserine and cystathionine|0019281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015841906.1;locus_tag=IY40_RS10970;product=homoserine O-acetyltransferase MetA;protein_id=WP_043139603.1;transl_table=11 NZ_JPQY01000015.1 RefSeq gene 2128 3726 . + . ID=gene-IY40_RS10975;Name=aceB;gbkey=Gene;gene=aceB;gene_biotype=protein_coding;locus_tag=IY40_RS10975;old_locus_tag=IY40_11155 NZ_JPQY01000015.1 Protein Homology CDS 2128 3726 . + 0 ID=cds-WP_042785479.1;Parent=gene-IY40_RS10975;Dbxref=GenBank:WP_042785479.1;Name=WP_042785479.1;Ontology_term=GO:0006097,GO:0004474;gbkey=CDS;gene=aceB;go_function=malate synthase activity|0004474||IEA;go_process=glyoxylate cycle|0006097||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212077.1;locus_tag=IY40_RS10975;product=malate synthase A;protein_id=WP_042785479.1;transl_table=11 NZ_JPQY01000015.1 RefSeq gene 3768 5075 . + . ID=gene-IY40_RS10980;Name=aceA;gbkey=Gene;gene=aceA;gene_biotype=protein_coding;locus_tag=IY40_RS10980;old_locus_tag=IY40_11160 NZ_JPQY01000015.1 Protein Homology CDS 3768 5075 . + 0 ID=cds-WP_025304483.1;Parent=gene-IY40_RS10980;Dbxref=GenBank:WP_025304483.1;Name=WP_025304483.1;Ontology_term=GO:0019752,GO:0004451;gbkey=CDS;gene=aceA;go_function=isocitrate lyase activity|0004451||IEA;go_process=carboxylic acid metabolic process|0019752||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009111237.1;locus_tag=IY40_RS10980;product=isocitrate lyase;protein_id=WP_025304483.1;transl_table=11 NZ_JPQY01000015.1 RefSeq gene 5145 6899 . + . ID=gene-IY40_RS10985;Name=aceK;gbkey=Gene;gene=aceK;gene_biotype=protein_coding;locus_tag=IY40_RS10985;old_locus_tag=IY40_11165 NZ_JPQY01000015.1 Protein Homology CDS 5145 6899 . + 0 ID=cds-WP_043139613.1;Parent=gene-IY40_RS10985;Dbxref=GenBank:WP_043139613.1;Name=WP_043139613.1;Ontology_term=GO:0006006,GO:0008772,GO:0016791;gbkey=CDS;gene=aceK;go_function=[isocitrate dehydrogenase (NADP+)] kinase activity|0008772||IEA,phosphatase activity|0016791||IEA;go_process=glucose metabolic process|0006006||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016930305.1;locus_tag=IY40_RS10985;product=bifunctional isocitrate dehydrogenase kinase/phosphatase;protein_id=WP_043139613.1;transl_table=11 NZ_JPQY01000015.1 RefSeq gene 6901 7542 . - . ID=gene-IY40_RS10990;Name=IY40_RS10990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS10990;old_locus_tag=IY40_11170 NZ_JPQY01000015.1 Protein Homology CDS 6901 7542 . - 0 ID=cds-WP_025304481.1;Parent=gene-IY40_RS10990;Dbxref=GenBank:WP_025304481.1;Name=WP_025304481.1;Ontology_term=GO:0016829,GO:0016830,GO:0016832,GO:0016833;gbkey=CDS;go_function=lyase activity|0016829||IEA,carbon-carbon lyase activity|0016830||IEA,aldehyde-lyase activity|0016832||IEA,oxo-acid-lyase activity|0016833||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004948904.1;locus_tag=IY40_RS10990;product=bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase;protein_id=WP_025304481.1;transl_table=11 NZ_JPQY01000015.1 RefSeq gene 7597 9411 . - . ID=gene-IY40_RS10995;Name=edd;gbkey=Gene;gene=edd;gene_biotype=protein_coding;locus_tag=IY40_RS10995;old_locus_tag=IY40_11175 NZ_JPQY01000015.1 Protein Homology CDS 7597 9411 . - 0 ID=cds-WP_043139616.1;Parent=gene-IY40_RS10995;Dbxref=GenBank:WP_043139616.1;Name=WP_043139616.1;Ontology_term=GO:0009255,GO:0004456;gbkey=CDS;gene=edd;go_function=phosphogluconate dehydratase activity|0004456||IEA;go_process=Entner-Doudoroff pathway through 6-phosphogluconate|0009255||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015962113.1;locus_tag=IY40_RS10995;product=phosphogluconate dehydratase;protein_id=WP_043139616.1;transl_table=11 NZ_JPQY01000015.1 RefSeq gene 9510 10847 . - . ID=gene-IY40_RS11000;Name=gntU;gbkey=Gene;gene=gntU;gene_biotype=protein_coding;locus_tag=IY40_RS11000;old_locus_tag=IY40_11180 NZ_JPQY01000015.1 Protein Homology CDS 9510 10847 . - 0 ID=cds-WP_043139712.1;Parent=gene-IY40_RS11000;Dbxref=GenBank:WP_043139712.1;Name=WP_043139712.1;Ontology_term=GO:0035429,GO:0015128,GO:0016020;gbkey=CDS;gene=gntU;go_component=membrane|0016020||IEA;go_function=gluconate transmembrane transporter activity|0015128||IEA;go_process=gluconate transmembrane transport|0035429||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004948895.1;locus_tag=IY40_RS11000;product=gluconate transporter;protein_id=WP_043139712.1;transl_table=11 NZ_JPQY01000015.1 RefSeq gene 10844 11383 . - . ID=gene-IY40_RS11005;Name=gntK;gbkey=Gene;gene=gntK;gene_biotype=protein_coding;locus_tag=IY40_RS11005;old_locus_tag=IY40_11185 NZ_JPQY01000015.1 Protein Homology CDS 10844 11383 . - 0 ID=cds-WP_004936645.1;Parent=gene-IY40_RS11005;Dbxref=GenBank:WP_004936645.1;Name=WP_004936645.1;gbkey=CDS;gene=gntK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004936645.1;locus_tag=IY40_RS11005;product=gluconokinase;protein_id=WP_004936645.1;transl_table=11 NZ_JPQY01000015.1 RefSeq gene 11636 12466 . - . ID=gene-IY40_RS11010;Name=iclR;gbkey=Gene;gene=iclR;gene_biotype=protein_coding;locus_tag=IY40_RS11010;old_locus_tag=IY40_11190 NZ_JPQY01000015.1 Protein Homology CDS 11636 12466 . - 0 ID=cds-WP_043139619.1;Parent=gene-IY40_RS11010;Dbxref=GenBank:WP_043139619.1;Name=WP_043139619.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=iclR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017894231.1;locus_tag=IY40_RS11010;product=glyoxylate bypass operon transcriptional repressor IclR;protein_id=WP_043139619.1;transl_table=11 NZ_JPQY01000015.1 RefSeq gene 12663 16358 . + . ID=gene-IY40_RS11015;Name=metH;gbkey=Gene;gene=metH;gene_biotype=protein_coding;locus_tag=IY40_RS11015;old_locus_tag=IY40_11195 NZ_JPQY01000015.1 Protein Homology CDS 12663 16358 . + 0 ID=cds-WP_152561303.1;Parent=gene-IY40_RS11015;Dbxref=GenBank:WP_152561303.1;Name=WP_152561303.1;Ontology_term=GO:0009086,GO:0008270,GO:0008705,GO:0031419;gbkey=CDS;gene=metH;go_function=zinc ion binding|0008270||IEA,methionine synthase activity|0008705||IEA,cobalamin binding|0031419||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015379251.1;locus_tag=IY40_RS11015;product=methionine synthase;protein_id=WP_152561303.1;transl_table=11 NZ_JPQY01000015.1 RefSeq gene 16397 17107 . - . ID=gene-IY40_RS11020;Name=IY40_RS11020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS11020;old_locus_tag=IY40_11200 NZ_JPQY01000015.1 Protein Homology CDS 16397 17107 . - 0 ID=cds-WP_042785476.1;Parent=gene-IY40_RS11020;Dbxref=GenBank:WP_042785476.1;Name=WP_042785476.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019453247.1;locus_tag=IY40_RS11020;product=UTRA domain-containing protein;protein_id=WP_042785476.1;transl_table=11 NZ_JPQY01000015.1 RefSeq gene 17301 18362 . + . ID=gene-IY40_RS11025;Name=IY40_RS11025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS11025;old_locus_tag=IY40_11205 NZ_JPQY01000015.1 Protein Homology CDS 17301 18362 . + 0 ID=cds-WP_004936660.1;Parent=gene-IY40_RS11025;Dbxref=GenBank:WP_004936660.1;Name=WP_004936660.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004936660.1;locus_tag=IY40_RS11025;product=ABC transporter substrate-binding protein;protein_id=WP_004936660.1;transl_table=11 NZ_JPQY01000015.1 RefSeq gene 18374 19183 . + . ID=gene-IY40_RS11030;Name=IY40_RS11030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS11030;old_locus_tag=IY40_11210 NZ_JPQY01000015.1 Protein Homology CDS 18374 19183 . + 0 ID=cds-WP_043139627.1;Parent=gene-IY40_RS11030;Dbxref=GenBank:WP_043139627.1;Name=WP_043139627.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015379248.1;locus_tag=IY40_RS11030;product=alkaline phosphatase family protein;protein_id=WP_043139627.1;transl_table=11 NZ_JPQY01000015.1 RefSeq gene 19180 20025 . + . ID=gene-IY40_RS11035;Name=IY40_RS11035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS11035;old_locus_tag=IY40_11215 NZ_JPQY01000015.1 Protein Homology CDS 19180 20025 . + 0 ID=cds-WP_016930298.1;Parent=gene-IY40_RS11035;Dbxref=GenBank:WP_016930298.1;Name=WP_016930298.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016930298.1;locus_tag=IY40_RS11035;product=ABC transporter permease;protein_id=WP_016930298.1;transl_table=11 NZ_JPQY01000015.1 RefSeq gene 20043 20828 . + . ID=gene-IY40_RS11040;Name=IY40_RS11040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS11040;old_locus_tag=IY40_11220 NZ_JPQY01000015.1 Protein Homology CDS 20043 20828 . + 0 ID=cds-WP_043139632.1;Parent=gene-IY40_RS11040;Dbxref=GenBank:WP_043139632.1;Name=WP_043139632.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004948868.1;locus_tag=IY40_RS11040;product=ABC transporter permease;protein_id=WP_043139632.1;transl_table=11 NZ_JPQY01000015.1 RefSeq gene 20833 21825 . + . ID=gene-IY40_RS11045;Name=IY40_RS11045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS11045;old_locus_tag=IY40_11225 NZ_JPQY01000015.1 Protein Homology CDS 20833 21825 . + 0 ID=cds-WP_043139634.1;Parent=gene-IY40_RS11045;Dbxref=GenBank:WP_043139634.1;Name=WP_043139634.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015379245.1;locus_tag=IY40_RS11045;product=ABC transporter ATP-binding protein;protein_id=WP_043139634.1;transl_table=11 NZ_JPQY01000015.1 RefSeq gene 22033 23682 . + . ID=gene-IY40_RS11050;Name=IY40_RS11050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS11050;old_locus_tag=IY40_11230 NZ_JPQY01000015.1 Protein Homology CDS 22033 23682 . + 0 ID=cds-WP_016930295.1;Parent=gene-IY40_RS11050;Dbxref=GenBank:WP_016930295.1;Name=WP_016930295.1;Ontology_term=GO:0044341,GO:0005436,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=sodium:phosphate symporter activity|0005436||IEA;go_process=sodium-dependent phosphate transport|0044341||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016930295.1;locus_tag=IY40_RS11050;product=Na/Pi cotransporter family protein;protein_id=WP_016930295.1;transl_table=11 NZ_JPQY01000015.1 RefSeq gene 23730 28556 . - . ID=gene-IY40_RS11055;Name=IY40_RS11055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS11055;old_locus_tag=IY40_11235 NZ_JPQY01000015.1 Protein Homology CDS 23730 28556 . - 0 ID=cds-WP_043139636.1;Parent=gene-IY40_RS11055;Dbxref=GenBank:WP_043139636.1;Name=WP_043139636.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016930294.1;locus_tag=IY40_RS11055;product=hemagglutinin repeat-containing protein;protein_id=WP_043139636.1;transl_table=11 NZ_JPQY01000015.1 RefSeq gene 28602 30281 . - . ID=gene-IY40_RS11060;Name=IY40_RS11060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS11060;old_locus_tag=IY40_11240 NZ_JPQY01000015.1 Protein Homology CDS 28602 30281 . - 0 ID=cds-WP_043139641.1;Parent=gene-IY40_RS11060;Dbxref=GenBank:WP_043139641.1;Name=WP_043139641.1;Ontology_term=GO:0006811,GO:0015031,GO:0015288,GO:0046930;gbkey=CDS;go_component=pore complex|0046930||IEA;go_function=porin activity|0015288||IEA;go_process=monoatomic ion transport|0006811||IEA,protein transport|0015031||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013814764.1;locus_tag=IY40_RS11060;product=ShlB/FhaC/HecB family hemolysin secretion/activation protein;protein_id=WP_043139641.1;transl_table=11 NZ_JPQY01000015.1 RefSeq gene 30666 31583 . - . ID=gene-IY40_RS11065;Name=panS;gbkey=Gene;gene=panS;gene_biotype=protein_coding;locus_tag=IY40_RS11065;old_locus_tag=IY40_11245 NZ_JPQY01000015.1 Protein Homology CDS 30666 31583 . - 0 ID=cds-WP_043139645.1;Parent=gene-IY40_RS11065;Dbxref=GenBank:WP_043139645.1;Name=WP_043139645.1;gbkey=CDS;gene=panS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015379242.1;locus_tag=IY40_RS11065;product=ketopantoate/pantoate/pantothenate transporter PanS;protein_id=WP_043139645.1;transl_table=11 NZ_JPQY01000015.1 RefSeq gene 31726 33093 . - . ID=gene-IY40_RS11070;Name=lysC;gbkey=Gene;gene=lysC;gene_biotype=protein_coding;locus_tag=IY40_RS11070;old_locus_tag=IY40_11250 NZ_JPQY01000015.1 Protein Homology CDS 31726 33093 . - 0 ID=cds-WP_025304470.1;Parent=gene-IY40_RS11070;Dbxref=GenBank:WP_025304470.1;Name=WP_025304470.1;Ontology_term=GO:0009089,GO:0004072;gbkey=CDS;gene=lysC;go_function=aspartate kinase activity|0004072||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015962105.1;locus_tag=IY40_RS11070;product=lysine-sensitive aspartokinase 3;protein_id=WP_025304470.1;transl_table=11 NZ_JPQY01000015.1 cmsearch riboswitch 33202 33395 . - . ID=id-NZ_JPQY01000015.1:33202..33395;Dbxref=RFAM:RF00168;Note=Lysine riboswitch is most abundant in Firmicutes and Gammaproteobacteria where they are found upstream of a number of genes involved in lysine biosynthesis%2C transport and catabolism;bound_moiety=lysine;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_JPQY01000015.1 RefSeq gene 33448 35256 . - . ID=gene-IY40_RS11075;Name=IY40_RS11075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS11075;old_locus_tag=IY40_11255 NZ_JPQY01000015.1 Protein Homology CDS 33448 35256 . - 0 ID=cds-WP_025304469.1;Parent=gene-IY40_RS11075;Dbxref=GenBank:WP_025304469.1;Name=WP_025304469.1;Ontology_term=GO:0006812,GO:1902600,GO:0015078,GO:0015297,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=proton transmembrane transporter activity|0015078||IEA,antiporter activity|0015297||IEA;go_process=monoatomic cation transport|0006812||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013814761.1;locus_tag=IY40_RS11075;product=cation:proton antiporter;protein_id=WP_025304469.1;transl_table=11 NZ_JPQY01000015.1 RefSeq gene 35486 37132 . + . ID=gene-IY40_RS11080;Name=pgi;gbkey=Gene;gene=pgi;gene_biotype=protein_coding;locus_tag=IY40_RS11080;old_locus_tag=IY40_11260 NZ_JPQY01000015.1 Protein Homology CDS 35486 37132 . + 0 ID=cds-WP_043139648.1;Parent=gene-IY40_RS11080;Dbxref=GenBank:WP_043139648.1;Name=WP_043139648.1;Ontology_term=GO:0006094,GO:0006096,GO:0004347;gbkey=CDS;gene=pgi;go_function=glucose-6-phosphate isomerase activity|0004347||IEA;go_process=gluconeogenesis|0006094||IEA,glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004705333.1;locus_tag=IY40_RS11080;product=glucose-6-phosphate isomerase;protein_id=WP_043139648.1;transl_table=11 NZ_JPQY01000015.1 RefSeq gene 37193 38626 . - . ID=gene-IY40_RS11085;Name=IY40_RS11085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS11085;old_locus_tag=IY40_11265 NZ_JPQY01000015.1 Protein Homology CDS 37193 38626 . - 0 ID=cds-WP_043139652.1;Parent=gene-IY40_RS11085;Dbxref=GenBank:WP_043139652.1;Name=WP_043139652.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015379239.1;locus_tag=IY40_RS11085;product=capsule assembly Wzi family protein;protein_id=WP_043139652.1;transl_table=11 NZ_JPQY01000015.1 RefSeq gene 38852 39259 . + . ID=gene-IY40_RS11090;Name=psiE;gbkey=Gene;gene=psiE;gene_biotype=protein_coding;locus_tag=IY40_RS11090;old_locus_tag=IY40_11270 NZ_JPQY01000015.1 Protein Homology CDS 38852 39259 . + 0 ID=cds-WP_015379238.1;Parent=gene-IY40_RS11090;Dbxref=GenBank:WP_015379238.1;Name=WP_015379238.1;gbkey=CDS;gene=psiE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004705335.1;locus_tag=IY40_RS11090;product=phosphate-starvation-inducible protein PsiE;protein_id=WP_015379238.1;transl_table=11 NZ_JPQY01000015.1 RefSeq gene 39345 40235 . - . ID=gene-IY40_RS11095;Name=malG;gbkey=Gene;gene=malG;gene_biotype=protein_coding;locus_tag=IY40_RS11095;old_locus_tag=IY40_11275 NZ_JPQY01000015.1 Protein Homology CDS 39345 40235 . - 0 ID=cds-WP_025304466.1;Parent=gene-IY40_RS11095;Dbxref=GenBank:WP_025304466.1;Name=WP_025304466.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=malG;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224556.1;locus_tag=IY40_RS11095;product=maltose ABC transporter permease MalG;protein_id=WP_025304466.1;transl_table=11 NZ_JPQY01000015.1 RefSeq gene 40247 41824 . - . ID=gene-IY40_RS11100;Name=malF;gbkey=Gene;gene=malF;gene_biotype=protein_coding;locus_tag=IY40_RS11100;old_locus_tag=IY40_11280 NZ_JPQY01000015.1 Protein Homology CDS 40247 41824 . - 0 ID=cds-WP_043139655.1;Parent=gene-IY40_RS11100;Dbxref=GenBank:WP_043139655.1;Name=WP_043139655.1;Ontology_term=GO:0055085,GO:0043190;gbkey=CDS;gene=malF;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017894219.1;locus_tag=IY40_RS11100;product=maltose ABC transporter permease MalF;protein_id=WP_043139655.1;transl_table=11 NZ_JPQY01000015.1 RefSeq gene 41882 43075 . - . ID=gene-IY40_RS11105;Name=malE;gbkey=Gene;gene=malE;gene_biotype=protein_coding;locus_tag=IY40_RS11105;old_locus_tag=IY40_11285 NZ_JPQY01000015.1 Protein Homology CDS 41882 43075 . - 0 ID=cds-WP_025304464.1;Parent=gene-IY40_RS11105;Dbxref=GenBank:WP_025304464.1;Name=WP_025304464.1;Ontology_term=GO:0008643,GO:0055085,GO:0015144;gbkey=CDS;gene=malE;go_function=carbohydrate transmembrane transporter activity|0015144||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011906139.1;locus_tag=IY40_RS11105;product=maltose/maltodextrin ABC transporter substrate-binding protein MalE;protein_id=WP_025304464.1;transl_table=11 NZ_JPQY01000015.1 RefSeq gene 43434 44405 . + . ID=gene-IY40_RS26655;Name=IY40_RS26655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS26655;old_locus_tag=IY40_11290 NZ_JPQY01000015.1 Protein Homology CDS 43434 44405 . + 0 ID=cds-WP_043139716.1;Parent=gene-IY40_RS26655;Dbxref=GenBank:WP_043139716.1;Name=WP_043139716.1;Ontology_term=GO:0005975,GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006328365.1;locus_tag=IY40_RS26655;product=alpha-amylase family glycosyl hydrolase;protein_id=WP_043139716.1;transl_table=11 NZ_JPQY01000015.1 RefSeq gene 44398 45507 . + . ID=gene-IY40_RS11115;Name=malK;gbkey=Gene;gene=malK;gene_biotype=protein_coding;locus_tag=IY40_RS11115;old_locus_tag=IY40_11295 NZ_JPQY01000015.1 Protein Homology CDS 44398 45507 . + 0 ID=cds-WP_025304462.1;Parent=gene-IY40_RS11115;Dbxref=GenBank:WP_025304462.1;Name=WP_025304462.1;Ontology_term=GO:0008643,GO:0055085,GO:0005524,GO:0140359,GO:0043190;gbkey=CDS;gene=malK;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011915502.1;locus_tag=IY40_RS11115;product=maltose/maltodextrin ABC transporter ATP-binding protein MalK;protein_id=WP_025304462.1;transl_table=11 NZ_JPQY01000015.1 RefSeq gene 45540 46829 . + . ID=gene-IY40_RS11120;Name=IY40_RS11120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS11120;old_locus_tag=IY40_11300 NZ_JPQY01000015.1 Protein Homology CDS 45540 46829 . + 0 ID=cds-WP_025304461.1;Parent=gene-IY40_RS11120;Dbxref=GenBank:WP_025304461.1;Name=WP_025304461.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013814754.1;locus_tag=IY40_RS11120;product=maltoporin;protein_id=WP_025304461.1;transl_table=11 NZ_JPQY01000015.1 RefSeq gene 46930 47835 . + . ID=gene-IY40_RS11125;Name=malM;gbkey=Gene;gene=malM;gene_biotype=protein_coding;locus_tag=IY40_RS11125;old_locus_tag=IY40_11305 NZ_JPQY01000015.1 Protein Homology CDS 46930 47835 . + 0 ID=cds-WP_043139661.1;Parent=gene-IY40_RS11125;Dbxref=GenBank:WP_043139661.1;Name=WP_043139661.1;Ontology_term=GO:0008643,GO:0042597;gbkey=CDS;gene=malM;go_component=periplasmic space|0042597||IEA;go_process=carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019080119.1;locus_tag=IY40_RS11125;product=maltose operon protein MalM;protein_id=WP_043139661.1;transl_table=11 NZ_JPQY01000015.1 RefSeq gene 47891 48874 . - . ID=gene-IY40_RS11130;Name=IY40_RS11130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS11130;old_locus_tag=IY40_11310 NZ_JPQY01000015.1 Protein Homology CDS 47891 48874 . - 0 ID=cds-WP_043139664.1;Parent=gene-IY40_RS11130;Dbxref=GenBank:WP_043139664.1;Name=WP_043139664.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016930281.1;locus_tag=IY40_RS11130;product=nucleoside hydrolase;protein_id=WP_043139664.1;transl_table=11 NZ_JPQY01000015.1 RefSeq gene 48896 49897 . - . ID=gene-IY40_RS11135;Name=IY40_RS11135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS11135;old_locus_tag=IY40_11315 NZ_JPQY01000015.1 Protein Homology CDS 48896 49897 . - 0 ID=cds-WP_025304458.1;Parent=gene-IY40_RS11135;Dbxref=GenBank:WP_025304458.1;Name=WP_025304458.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012147160.1;locus_tag=IY40_RS11135;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_025304458.1;transl_table=11 NZ_JPQY01000015.1 RefSeq gene 49922 51304 . - . ID=gene-IY40_RS11140;Name=IY40_RS11140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS11140;old_locus_tag=IY40_11320 NZ_JPQY01000015.1 Protein Homology CDS 49922 51304 . - 0 ID=cds-WP_043139666.1;Parent=gene-IY40_RS11140;Dbxref=GenBank:WP_043139666.1;Name=WP_043139666.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004936722.1;locus_tag=IY40_RS11140;product=MFS transporter;protein_id=WP_043139666.1;transl_table=11 NZ_JPQY01000015.1 RefSeq gene 51697 52212 . + . ID=gene-IY40_RS11145;Name=ubiC;gbkey=Gene;gene=ubiC;gene_biotype=protein_coding;locus_tag=IY40_RS11145;old_locus_tag=IY40_11325 NZ_JPQY01000015.1 Protein Homology CDS 51697 52212 . + 0 ID=cds-WP_025304456.1;Parent=gene-IY40_RS11145;Dbxref=GenBank:WP_025304456.1;Name=WP_025304456.1;Ontology_term=GO:0008813;gbkey=CDS;gene=ubiC;go_function=chorismate lyase activity|0008813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004936724.1;locus_tag=IY40_RS11145;product=chorismate lyase;protein_id=WP_025304456.1;transl_table=11 NZ_JPQY01000015.1 RefSeq gene 52231 53103 . + . ID=gene-IY40_RS11150;Name=ubiA;gbkey=Gene;gene=ubiA;gene_biotype=protein_coding;locus_tag=IY40_RS11150;old_locus_tag=IY40_11330 NZ_JPQY01000015.1 Protein Homology CDS 52231 53103 . + 0 ID=cds-WP_025304455.1;Parent=gene-IY40_RS11150;Dbxref=GenBank:WP_025304455.1;Name=WP_025304455.1;Ontology_term=GO:0006744,GO:0008412;gbkey=CDS;gene=ubiA;go_function=4-hydroxybenzoate polyprenyltransferase activity|0008412||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015379227.1;locus_tag=IY40_RS11150;product=4-hydroxybenzoate octaprenyltransferase;protein_id=WP_025304455.1;transl_table=11 NZ_JPQY01000015.1 RefSeq gene 53170 55635 . - . ID=gene-IY40_RS11155;Name=plsB;gbkey=Gene;gene=plsB;gene_biotype=protein_coding;locus_tag=IY40_RS11155;old_locus_tag=IY40_11335 NZ_JPQY01000015.1 Protein Homology CDS 53170 55635 . - 0 ID=cds-WP_043139667.1;Parent=gene-IY40_RS11155;Dbxref=GenBank:WP_043139667.1;Name=WP_043139667.1;Ontology_term=GO:0008654,GO:0004366;gbkey=CDS;gene=plsB;go_function=glycerol-3-phosphate O-acyltransferase activity|0004366||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004948799.1;locus_tag=IY40_RS11155;product=glycerol-3-phosphate 1-O-acyltransferase PlsB;protein_id=WP_043139667.1;transl_table=11 NZ_JPQY01000015.1 RefSeq gene 55784 56152 . + . ID=gene-IY40_RS11160;Name=IY40_RS11160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS11160;old_locus_tag=IY40_11340 NZ_JPQY01000015.1 Protein Homology CDS 55784 56152 . + 0 ID=cds-WP_015379225.1;Parent=gene-IY40_RS11160;Dbxref=GenBank:WP_015379225.1;Name=WP_015379225.1;Ontology_term=GO:0006654,GO:0008654,GO:0016310,GO:0004143,GO:0005524,GO:0046872,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP-dependent diacylglycerol kinase activity|0004143||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=phosphatidic acid biosynthetic process|0006654||IEA,phospholipid biosynthetic process|0008654||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016930276.1;locus_tag=IY40_RS11160;product=diacylglycerol kinase;protein_id=WP_015379225.1;transl_table=11 NZ_JPQY01000015.1 RefSeq gene 56255 56863 . + . ID=gene-IY40_RS11165;Name=lexA;gbkey=Gene;gene=lexA;gene_biotype=protein_coding;locus_tag=IY40_RS11165;old_locus_tag=IY40_11345 NZ_JPQY01000015.1 Protein Homology CDS 56255 56863 . + 0 ID=cds-WP_025160136.1;Parent=gene-IY40_RS11165;Dbxref=GenBank:WP_025160136.1;Name=WP_025160136.1;Ontology_term=GO:0009432,GO:0045892,GO:0004252;gbkey=CDS;gene=lexA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=SOS response|0009432||IEA,negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015869689.1;locus_tag=IY40_RS11165;product=transcriptional repressor LexA;protein_id=WP_025160136.1;transl_table=11 NZ_JPQY01000015.1 RefSeq gene 56967 58304 . + . ID=gene-IY40_RS11170;Name=dinF;gbkey=Gene;gene=dinF;gene_biotype=protein_coding;locus_tag=IY40_RS11170;old_locus_tag=IY40_11350 NZ_JPQY01000015.1 Protein Homology CDS 56967 58304 . + 0 ID=cds-WP_025304452.1;Parent=gene-IY40_RS11170;Dbxref=GenBank:WP_025304452.1;Name=WP_025304452.1;Ontology_term=GO:0055085,GO:0015297,GO:0042910,GO:0016020;gbkey=CDS;gene=dinF;go_component=membrane|0016020||IEA;go_function=antiporter activity|0015297||IEA,xenobiotic transmembrane transporter activity|0042910||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013814748.1;locus_tag=IY40_RS11170;product=MATE family efflux transporter DinF;protein_id=WP_025304452.1;transl_table=11 NZ_JPQY01000015.1 RefSeq gene 58620 58829 . + . ID=gene-IY40_RS11175;Name=IY40_RS11175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS11175;old_locus_tag=IY40_11355 NZ_JPQY01000015.1 Protein Homology CDS 58620 58829 . + 0 ID=cds-WP_004936743.1;Parent=gene-IY40_RS11175;Dbxref=GenBank:WP_004936743.1;Name=WP_004936743.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313055.1;locus_tag=IY40_RS11175;product=CsbD family protein;protein_id=WP_004936743.1;transl_table=11 NZ_JPQY01000015.1 RefSeq gene 58932 59444 . - . ID=gene-IY40_RS11180;Name=zur;gbkey=Gene;gene=zur;gene_biotype=protein_coding;locus_tag=IY40_RS11180;old_locus_tag=IY40_11360 NZ_JPQY01000015.1 Protein Homology CDS 58932 59444 . - 0 ID=cds-WP_015379223.1;Parent=gene-IY40_RS11180;Dbxref=GenBank:WP_015379223.1;Name=WP_015379223.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=zur;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013814747.1;locus_tag=IY40_RS11180;product=zinc uptake transcriptional repressor Zur;protein_id=WP_015379223.1;transl_table=11 NZ_JPQY01000015.1 RefSeq gene 59690 60262 . + . ID=gene-IY40_RS11185;Name=IY40_RS11185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS11185;old_locus_tag=IY40_11365 NZ_JPQY01000015.1 Protein Homology CDS 59690 60262 . + 0 ID=cds-WP_025304451.1;Parent=gene-IY40_RS11185;Dbxref=GenBank:WP_025304451.1;Name=WP_025304451.1;Ontology_term=GO:0016407;gbkey=CDS;go_function=acetyltransferase activity|0016407||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016930274.1;locus_tag=IY40_RS11185;product=sugar O-acetyltransferase;protein_id=WP_025304451.1;transl_table=11 NZ_JPQY01000015.1 RefSeq gene 60267 60812 . - . ID=gene-IY40_RS11190;Name=IY40_RS11190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS11190;old_locus_tag=IY40_11370 NZ_JPQY01000015.1 Protein Homology CDS 60267 60812 . - 0 ID=cds-WP_043139670.1;Parent=gene-IY40_RS11190;Dbxref=GenBank:WP_043139670.1;Name=WP_043139670.1;Ontology_term=GO:0006352,GO:0003677,GO:0016987;gbkey=CDS;go_function=DNA binding|0003677||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004936752.1;locus_tag=IY40_RS11190;product=RNA polymerase sigma factor;protein_id=WP_043139670.1;transl_table=11 NZ_JPQY01000015.1 RefSeq gene 60831 61364 . - . ID=gene-IY40_RS11195;Name=IY40_RS11195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS11195;old_locus_tag=IY40_11375 NZ_JPQY01000015.1 Protein Homology CDS 60831 61364 . - 0 ID=cds-WP_043139672.1;Parent=gene-IY40_RS11195;Dbxref=GenBank:WP_043139672.1;Name=WP_043139672.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004948775.1;locus_tag=IY40_RS11195;product=tetratricopeptide repeat protein;protein_id=WP_043139672.1;transl_table=11 NZ_JPQY01000015.1 RefSeq gene 61567 62577 . + . ID=gene-IY40_RS11200;Name=dusA;gbkey=Gene;gene=dusA;gene_biotype=protein_coding;locus_tag=IY40_RS11200;old_locus_tag=IY40_11380 NZ_JPQY01000015.1 Protein Homology CDS 61567 62577 . + 0 ID=cds-WP_043139674.1;Parent=gene-IY40_RS11200;Dbxref=GenBank:WP_043139674.1;Name=WP_043139674.1;Ontology_term=GO:0002943,GO:0017150,GO:0050660;gbkey=CDS;gene=dusA;go_function=tRNA dihydrouridine synthase activity|0017150||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA dihydrouridine synthesis|0002943||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013814743.1;locus_tag=IY40_RS11200;product=tRNA dihydrouridine(20/20a) synthase DusA;protein_id=WP_043139674.1;transl_table=11 NZ_JPQY01000015.1 RefSeq gene 62735 62953 . + . ID=gene-IY40_RS11205;Name=pspG;gbkey=Gene;gene=pspG;gene_biotype=protein_coding;locus_tag=IY40_RS11205;old_locus_tag=IY40_11385 NZ_JPQY01000015.1 Protein Homology CDS 62735 62953 . + 0 ID=cds-WP_025304448.1;Parent=gene-IY40_RS11205;Dbxref=GenBank:WP_025304448.1;Name=WP_025304448.1;gbkey=CDS;gene=pspG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004719412.1;locus_tag=IY40_RS11205;product=envelope stress response protein PspG;protein_id=WP_025304448.1;transl_table=11 NZ_JPQY01000015.1 RefSeq gene 63254 64237 . - . ID=gene-IY40_RS11210;Name=IY40_RS11210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS11210;old_locus_tag=IY40_11390 NZ_JPQY01000015.1 Protein Homology CDS 63254 64237 . - 0 ID=cds-WP_025304447.1;Parent=gene-IY40_RS11210;Dbxref=GenBank:WP_025304447.1;Name=WP_025304447.1;Ontology_term=GO:0008270,GO:0016491;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019082201.1;locus_tag=IY40_RS11210;product=quinone oxidoreductase;protein_id=WP_025304447.1;transl_table=11 NZ_JPQY01000015.1 RefSeq gene 64411 65835 . + . ID=gene-IY40_RS11215;Name=dnaB;gbkey=Gene;gene=dnaB;gene_biotype=protein_coding;locus_tag=IY40_RS11215;old_locus_tag=IY40_11395 NZ_JPQY01000015.1 Protein Homology CDS 64411 65835 . + 0 ID=cds-WP_025160134.1;Parent=gene-IY40_RS11215;Dbxref=GenBank:WP_025160134.1;Name=WP_025160134.1;gbkey=CDS;gene=dnaB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014539604.1;locus_tag=IY40_RS11215;product=replicative DNA helicase;protein_id=WP_025160134.1;transl_table=11 NZ_JPQY01000015.1 RefSeq gene 65853 66932 . + . ID=gene-IY40_RS11220;Name=alr;gbkey=Gene;gene=alr;gene_biotype=protein_coding;locus_tag=IY40_RS11220;old_locus_tag=IY40_11400 NZ_JPQY01000015.1 Protein Homology CDS 65853 66932 . + 0 ID=cds-WP_043139678.1;Parent=gene-IY40_RS11220;Dbxref=GenBank:WP_043139678.1;Name=WP_043139678.1;Ontology_term=GO:0006522,GO:0009252,GO:0008784;gbkey=CDS;gene=alr;go_function=alanine racemase activity|0008784||IEA;go_process=alanine metabolic process|0006522||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304687.1;locus_tag=IY40_RS11220;product=alanine racemase;protein_id=WP_043139678.1;transl_table=11 NZ_JPQY01000015.1 RefSeq gene 66977 67744 . - . ID=gene-IY40_RS11225;Name=IY40_RS11225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS11225;old_locus_tag=IY40_11405 NZ_JPQY01000015.1 Protein Homology CDS 66977 67744 . - 0 ID=cds-WP_043139682.1;Parent=gene-IY40_RS11225;Dbxref=GenBank:WP_043139682.1;Name=WP_043139682.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013814739.1;locus_tag=IY40_RS11225;product=transporter substrate-binding domain-containing protein;protein_id=WP_043139682.1;transl_table=11 NZ_JPQY01000015.1 RefSeq gene 67960 68433 . + . ID=gene-IY40_RS11230;Name=IY40_RS11230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS11230;old_locus_tag=IY40_11410 NZ_JPQY01000015.1 Protein Homology CDS 67960 68433 . + 0 ID=cds-WP_025304444.1;Parent=gene-IY40_RS11230;Dbxref=GenBank:WP_025304444.1;Name=WP_025304444.1;Ontology_term=GO:0043565;gbkey=CDS;go_function=sequence-specific DNA binding|0043565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013814737.1;locus_tag=IY40_RS11230;product=Lrp/AsnC family transcriptional regulator;protein_id=WP_025304444.1;transl_table=11 NZ_JPQY01000015.1 RefSeq gene 68514 69707 . + . ID=gene-IY40_RS11235;Name=IY40_RS11235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS11235;old_locus_tag=IY40_11415 NZ_JPQY01000015.1 Protein Homology CDS 68514 69707 . + 0 ID=cds-WP_043139687.1;Parent=gene-IY40_RS11235;Dbxref=GenBank:WP_043139687.1;Name=WP_043139687.1;Ontology_term=GO:0008483,GO:0030170;gbkey=CDS;go_function=transaminase activity|0008483||IEA,pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304686.1;locus_tag=IY40_RS11235;product=amino acid aminotransferase;protein_id=WP_043139687.1;transl_table=11 NZ_JPQY01000015.1 RefSeq pseudogene 69834 70250 . + . ID=gene-IY40_RS11240;Name=IY40_RS11240;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IY40_RS11240;old_locus_tag=IY40_11420;pseudo=true NZ_JPQY01000015.1 Protein Homology CDS 69834 70250 . + 0 ID=cds-IY40_RS11240;Parent=gene-IY40_RS11240;Note=internal stop;Ontology_term=GO:0003824,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313065.1;locus_tag=IY40_RS11240;product=secondary thiamine-phosphate synthase enzyme YjbQ;pseudo=true;transl_table=11 NZ_JPQY01000015.1 RefSeq gene 70255 70608 . + . ID=gene-IY40_RS11245;Name=IY40_RS11245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS11245;old_locus_tag=IY40_11425 NZ_JPQY01000015.1 Protein Homology CDS 70255 70608 . + 0 ID=cds-WP_025304442.1;Parent=gene-IY40_RS11245;Dbxref=GenBank:WP_025304442.1;Name=WP_025304442.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017894192.1;locus_tag=IY40_RS11245;product=MmcQ/YjbR family DNA-binding protein;protein_id=WP_025304442.1;transl_table=11 NZ_JPQY01000015.1 RefSeq gene 70760 71317 . + . ID=gene-IY40_RS11250;Name=maa;gbkey=Gene;gene=maa;gene_biotype=protein_coding;locus_tag=IY40_RS11250;old_locus_tag=IY40_11430 NZ_JPQY01000015.1 Protein Homology CDS 70760 71317 . + 0 ID=cds-WP_025304441.1;Parent=gene-IY40_RS11250;Dbxref=GenBank:WP_025304441.1;Name=WP_025304441.1;Ontology_term=GO:0016407;gbkey=CDS;gene=maa;go_function=acetyltransferase activity|0016407||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012147136.1;locus_tag=IY40_RS11250;product=maltose O-acetyltransferase;protein_id=WP_025304441.1;transl_table=11 NZ_JPQY01000015.1 RefSeq gene 71349 72401 . - . ID=gene-IY40_RS11255;Name=IY40_RS11255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS11255;old_locus_tag=IY40_11435 NZ_JPQY01000015.1 Protein Homology CDS 71349 72401 . - 0 ID=cds-WP_043139692.1;Parent=gene-IY40_RS11255;Dbxref=GenBank:WP_043139692.1;Name=WP_043139692.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004948729.1;locus_tag=IY40_RS11255;product=NAD(P)-dependent alcohol dehydrogenase;protein_id=WP_043139692.1;transl_table=11 NZ_JPQY01000015.1 RefSeq gene 72630 75458 . - . ID=gene-IY40_RS11260;Name=uvrA;gbkey=Gene;gene=uvrA;gene_biotype=protein_coding;locus_tag=IY40_RS11260;old_locus_tag=IY40_11440 NZ_JPQY01000015.1 Protein Homology CDS 72630 75458 . - 0 ID=cds-WP_043139696.1;Parent=gene-IY40_RS11260;Dbxref=GenBank:WP_043139696.1;Name=WP_043139696.1;Ontology_term=GO:0006289,GO:0003677,GO:0005524,GO:0016887;gbkey=CDS;gene=uvrA;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004936790.1;locus_tag=IY40_RS11260;product=excinuclease ABC subunit UvrA;protein_id=WP_043139696.1;transl_table=11 NZ_JPQY01000015.1 RefSeq gene 75736 76266 . + . ID=gene-IY40_RS11265;Name=ssb1;gbkey=Gene;gene=ssb1;gene_biotype=protein_coding;locus_tag=IY40_RS11265;old_locus_tag=IY40_11445 NZ_JPQY01000015.1 Protein Homology CDS 75736 76266 . + 0 ID=cds-WP_004936793.1;Parent=gene-IY40_RS11265;Dbxref=GenBank:WP_004936793.1;Name=WP_004936793.1;gbkey=CDS;gene=ssb1;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000168322.1;locus_tag=IY40_RS11265;product=single-stranded DNA-binding protein SSB1;protein_id=WP_004936793.1;transl_table=11 NZ_JPQY01000015.1 RefSeq gene 76353 77309 . - . ID=gene-IY40_RS11270;Name=IY40_RS11270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS11270;old_locus_tag=IY40_11450 NZ_JPQY01000015.1 Protein Homology CDS 76353 77309 . - 0 ID=cds-WP_025304437.1;Parent=gene-IY40_RS11270;Dbxref=GenBank:WP_025304437.1;Name=WP_025304437.1;Ontology_term=GO:0016812,GO:0046872;gbkey=CDS;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds%2C in cyclic amides|0016812||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015379212.1;locus_tag=IY40_RS11270;product=cyclase family protein;protein_id=WP_025304437.1;transl_table=11 NZ_JPQY01000015.1 RefSeq gene 77531 77743 . - . ID=gene-IY40_RS11275;Name=IY40_RS11275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS11275;old_locus_tag=IY40_11455 NZ_JPQY01000015.1 Protein Homology CDS 77531 77743 . - 0 ID=cds-WP_004936800.1;Parent=gene-IY40_RS11275;Dbxref=GenBank:WP_004936800.1;Name=WP_004936800.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004936800.1;locus_tag=IY40_RS11275;product=YdgH/BhsA/McbA family protein;protein_id=WP_004936800.1;transl_table=11 NZ_JPQY01000015.1 RefSeq gene 78007 78756 . - . ID=gene-IY40_RS11280;Name=IY40_RS11280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS11280;old_locus_tag=IY40_11460 NZ_JPQY01000015.1 Protein Homology CDS 78007 78756 . - 0 ID=cds-WP_043139701.1;Parent=gene-IY40_RS11280;Dbxref=GenBank:WP_043139701.1;Name=WP_043139701.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004936803.1;locus_tag=IY40_RS11280;product=3-oxoacyl-ACP reductase family protein;protein_id=WP_043139701.1;transl_table=11 NZ_JPQY01000015.1 RefSeq gene 78906 79166 . - . ID=gene-IY40_RS11285;Name=bhsA;gbkey=Gene;gene=bhsA;gene_biotype=protein_coding;locus_tag=IY40_RS11285;old_locus_tag=IY40_11465 NZ_JPQY01000015.1 Protein Homology CDS 78906 79166 . - 0 ID=cds-WP_025304435.1;Parent=gene-IY40_RS11285;Dbxref=GenBank:WP_025304435.1;Name=WP_025304435.1;Ontology_term=GO:0006950,GO:0046688;gbkey=CDS;gene=bhsA;go_process=response to stress|0006950||IEA,response to copper ion|0046688||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004948717.1;locus_tag=IY40_RS11285;product=multiple stress resistance protein BhsA;protein_id=WP_025304435.1;transl_table=11 NZ_JPQY01000015.1 RefSeq gene 79362 79805 . + . ID=gene-IY40_RS11290;Name=IY40_RS11290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS11290;old_locus_tag=IY40_11470 NZ_JPQY01000015.1 Protein Homology CDS 79362 79805 . + 0 ID=cds-WP_025304434.1;Parent=gene-IY40_RS11290;Dbxref=GenBank:WP_025304434.1;Name=WP_025304434.1;Ontology_term=GO:0008289;gbkey=CDS;go_function=lipid binding|0008289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004936812.1;locus_tag=IY40_RS11290;product=lipocalin-like domain-containing protein;protein_id=WP_025304434.1;transl_table=11 NZ_JPQY01000015.1 RefSeq gene 79802 80470 . + . ID=gene-IY40_RS11295;Name=IY40_RS11295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS11295;old_locus_tag=IY40_11475 NZ_JPQY01000015.1 Protein Homology CDS 79802 80470 . + 0 ID=cds-WP_043139706.1;Parent=gene-IY40_RS11295;Dbxref=GenBank:WP_043139706.1;Name=WP_043139706.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019453191.1;locus_tag=IY40_RS11295;product=glutathione S-transferase family protein;protein_id=WP_043139706.1;transl_table=11 NZ_JPQY01000015.1 RefSeq gene 80518 80925 . + . ID=gene-IY40_RS11300;Name=IY40_RS11300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS11300;old_locus_tag=IY40_11480 NZ_JPQY01000015.1 Protein Homology CDS 80518 80925 . + 0 ID=cds-WP_025304432.1;Parent=gene-IY40_RS11300;Dbxref=GenBank:WP_025304432.1;Name=WP_025304432.1;Ontology_term=GO:0003824,GO:0046872;gbkey=CDS;go_function=catalytic activity|0003824||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013814728.1;locus_tag=IY40_RS11300;product=VOC family protein;protein_id=WP_025304432.1;transl_table=11 NZ_JPQY01000015.1 RefSeq gene 81242 82603 . + . ID=gene-IY40_RS11305;Name=IY40_RS11305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS11305;old_locus_tag=IY40_11485 NZ_JPQY01000015.1 Protein Homology CDS 81242 82603 . + 0 ID=cds-WP_025304431.1;Parent=gene-IY40_RS11305;Dbxref=GenBank:WP_025304431.1;Name=WP_025304431.1;Ontology_term=GO:0015851,GO:0015205,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=nucleobase transmembrane transporter activity|0015205||IEA;go_process=nucleobase transport|0015851||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004097047.1;locus_tag=IY40_RS11305;product=NCS2 family permease;protein_id=WP_025304431.1;transl_table=11 NZ_JPQY01000015.1 RefSeq gene 82801 84450 . + . ID=gene-IY40_RS11310;Name=IY40_RS11310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS11310;old_locus_tag=IY40_11490 NZ_JPQY01000015.1 Protein Homology CDS 82801 84450 . + 0 ID=cds-WP_025304430.1;Parent=gene-IY40_RS11310;Dbxref=GenBank:WP_025304430.1;Name=WP_025304430.1;Ontology_term=GO:0006814,GO:0006885,GO:1902600,GO:0015385,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=sodium:proton antiporter activity|0015385||IEA;go_process=sodium ion transport|0006814||IEA,regulation of pH|0006885||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004704764.1;locus_tag=IY40_RS11310;product=Na+/H+ antiporter;protein_id=WP_025304430.1;transl_table=11 NZ_JPQY01000015.1 RefSeq gene 84527 85414 . - . ID=gene-IY40_RS11315;Name=IY40_RS11315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS11315;old_locus_tag=IY40_11495 NZ_JPQY01000015.1 Protein Homology CDS 84527 85414 . - 0 ID=cds-WP_025304429.1;Parent=gene-IY40_RS11315;Dbxref=GenBank:WP_025304429.1;Name=WP_025304429.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019453187.1;locus_tag=IY40_RS11315;product=LysR family transcriptional regulator;protein_id=WP_025304429.1;transl_table=11 NZ_JPQY01000015.1 RefSeq gene 85555 85977 . + . ID=gene-IY40_RS11320;Name=IY40_RS11320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS11320;old_locus_tag=IY40_11500 NZ_JPQY01000015.1 Protein Homology CDS 85555 85977 . + 0 ID=cds-WP_004936830.1;Parent=gene-IY40_RS11320;Dbxref=GenBank:WP_004936830.1;Name=WP_004936830.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004948705.1;locus_tag=IY40_RS11320;product=CidA/LrgA family protein;protein_id=WP_004936830.1;transl_table=11 NZ_JPQY01000015.1 RefSeq gene 85970 86659 . + . ID=gene-IY40_RS11325;Name=IY40_RS11325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS11325;old_locus_tag=IY40_11505 NZ_JPQY01000015.1 Protein Homology CDS 85970 86659 . + 0 ID=cds-WP_004936833.1;Parent=gene-IY40_RS11325;Dbxref=GenBank:WP_004936833.1;Name=WP_004936833.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012147121.1;locus_tag=IY40_RS11325;product=LrgB family protein;protein_id=WP_004936833.1;transl_table=11 ##sequence-region NZ_JPQY01000016.1 1 134670 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=615 NZ_JPQY01000016.1 RefSeq region 1 134670 . + . ID=NZ_JPQY01000016.1:1..134670;Dbxref=taxon:615;collected-by=Mahloro H. Serepa%3B Vincent M. Gray;collection-date=2013-04-11;country=South Africa: North West Province;gbkey=Src;genome=genomic;identified-by=Mahloro H. Serepa%3B Vincent M. Gray;isolation-source=entomopathogenic nematode Oscheius sp. MCB living in soil;mol_type=genomic DNA;nat-host=Oscheius sp. MCB;strain=MCB NZ_JPQY01000016.1 RefSeq gene 1 835 . + . ID=gene-IY40_RS11330;Name=IY40_RS11330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS11330;old_locus_tag=IY40_11510;partial=true;start_range=.,1 NZ_JPQY01000016.1 Protein Homology CDS 1 835 . + 1 ID=cds-WP_043139735.1;Parent=gene-IY40_RS11330;Dbxref=GenBank:WP_043139735.1;Name=WP_043139735.1;Ontology_term=GO:0071705,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=nitrogen compound transport|0071705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015378949.1;locus_tag=IY40_RS11330;partial=true;product=BCCT family transporter;protein_id=WP_043139735.1;start_range=.,1;transl_table=11 NZ_JPQY01000016.1 RefSeq gene 842 1273 . - . ID=gene-IY40_RS11335;Name=IY40_RS11335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS11335;old_locus_tag=IY40_11515 NZ_JPQY01000016.1 Protein Homology CDS 842 1273 . - 0 ID=cds-WP_043139738.1;Parent=gene-IY40_RS11335;Dbxref=GenBank:WP_043139738.1;Name=WP_043139738.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015378948.1;locus_tag=IY40_RS11335;product=VOC family protein;protein_id=WP_043139738.1;transl_table=11 NZ_JPQY01000016.1 RefSeq gene 1432 2349 . - . ID=gene-IY40_RS11340;Name=IY40_RS11340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS11340;old_locus_tag=IY40_11520 NZ_JPQY01000016.1 Protein Homology CDS 1432 2349 . - 0 ID=cds-WP_025304096.1;Parent=gene-IY40_RS11340;Dbxref=GenBank:WP_025304096.1;Name=WP_025304096.1;Ontology_term=GO:0010181,GO:0016491;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004931740.1;locus_tag=IY40_RS11340;product=TIGR03571 family LLM class oxidoreductase;protein_id=WP_025304096.1;transl_table=11 NZ_JPQY01000016.1 RefSeq gene 3019 4284 . + . ID=gene-IY40_RS11345;Name=IY40_RS11345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS11345;old_locus_tag=IY40_11525 NZ_JPQY01000016.1 Protein Homology CDS 3019 4284 . + 0 ID=cds-WP_049206126.1;Parent=gene-IY40_RS11345;Dbxref=GenBank:WP_049206126.1;Name=WP_049206126.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015378944.1;locus_tag=IY40_RS11345;product=MFS transporter;protein_id=WP_049206126.1;transl_table=11 NZ_JPQY01000016.1 RefSeq gene 4320 5129 . + . ID=gene-IY40_RS11350;Name=IY40_RS11350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS11350;old_locus_tag=IY40_11530 NZ_JPQY01000016.1 Protein Homology CDS 4320 5129 . + 0 ID=cds-WP_038629879.1;Parent=gene-IY40_RS11350;Dbxref=GenBank:WP_038629879.1;Name=WP_038629879.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016929945.1;locus_tag=IY40_RS11350;product=MoaF C-terminal domain-containing protein;protein_id=WP_038629879.1;transl_table=11 NZ_JPQY01000016.1 RefSeq gene 5131 6270 . - . ID=gene-IY40_RS11355;Name=lldD;gbkey=Gene;gene=lldD;gene_biotype=protein_coding;locus_tag=IY40_RS11355;old_locus_tag=IY40_11535 NZ_JPQY01000016.1 Protein Homology CDS 5131 6270 . - 0 ID=cds-WP_043139771.1;Parent=gene-IY40_RS11355;Dbxref=GenBank:WP_043139771.1;Name=WP_043139771.1;Ontology_term=GO:0006089,GO:0004457,GO:0010181;gbkey=CDS;gene=lldD;go_function=lactate dehydrogenase activity|0004457||IEA,FMN binding|0010181||IEA;go_process=lactate metabolic process|0006089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019455688.1;locus_tag=IY40_RS11355;product=FMN-dependent L-lactate dehydrogenase LldD;protein_id=WP_043139771.1;transl_table=11 NZ_JPQY01000016.1 RefSeq gene 6313 7896 . - . ID=gene-IY40_RS11360;Name=IY40_RS11360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS11360;old_locus_tag=IY40_11540 NZ_JPQY01000016.1 Protein Homology CDS 6313 7896 . - 0 ID=cds-WP_043139775.1;Parent=gene-IY40_RS11360;Dbxref=GenBank:WP_043139775.1;Name=WP_043139775.1;Ontology_term=GO:0015727,GO:0015129,GO:0015295,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=lactate transmembrane transporter activity|0015129||IEA,solute:proton symporter activity|0015295||IEA;go_process=lactate transport|0015727||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016929943.1;locus_tag=IY40_RS11360;product=L-lactate permease;protein_id=WP_043139775.1;transl_table=11 NZ_JPQY01000016.1 RefSeq gene 8220 9140 . - . ID=gene-IY40_RS11365;Name=IY40_RS11365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS11365;old_locus_tag=IY40_11545 NZ_JPQY01000016.1 Protein Homology CDS 8220 9140 . - 0 ID=cds-WP_025304091.1;Parent=gene-IY40_RS11365;Dbxref=GenBank:WP_025304091.1;Name=WP_025304091.1;Ontology_term=GO:0006355,GO:0001216,GO:0032993;gbkey=CDS;go_component=protein-DNA complex|0032993||IEA;go_function=DNA-binding transcription activator activity|0001216||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015378940.1;locus_tag=IY40_RS11365;product=LysR family transcriptional regulator;protein_id=WP_025304091.1;transl_table=11 NZ_JPQY01000016.1 RefSeq gene 9319 10971 . + . ID=gene-IY40_RS11370;Name=IY40_RS11370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS11370;old_locus_tag=IY40_11550 NZ_JPQY01000016.1 Protein Homology CDS 9319 10971 . + 0 ID=cds-WP_043139777.1;Parent=gene-IY40_RS11370;Dbxref=GenBank:WP_043139777.1;Name=WP_043139777.1;Ontology_term=GO:0015833,GO:0140359,GO:1904680;gbkey=CDS;go_function=ABC-type transporter activity|0140359||IEA,peptide transmembrane transporter activity|1904680||IEA;go_process=peptide transport|0015833||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004931801.1;locus_tag=IY40_RS11370;product=multidrug ABC transporter permease/ATP-binding protein;protein_id=WP_043139777.1;transl_table=11 NZ_JPQY01000016.1 RefSeq gene 11360 11473 . + . ID=gene-IY40_RS25290;Name=IY40_RS25290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS25290 NZ_JPQY01000016.1 Protein Homology CDS 11360 11473 . + 0 ID=cds-WP_049232362.1;Parent=gene-IY40_RS25290;Dbxref=GenBank:WP_049232362.1;Name=WP_049232362.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017893837.1;locus_tag=IY40_RS25290;product=YmiA family putative membrane protein;protein_id=WP_049232362.1;transl_table=11 NZ_JPQY01000016.1 RefSeq gene 11497 11664 . + . ID=gene-IY40_RS26375;Name=IY40_RS26375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS26375 NZ_JPQY01000016.1 Protein Homology CDS 11497 11664 . + 0 ID=cds-WP_167324577.1;Parent=gene-IY40_RS26375;Dbxref=GenBank:WP_167324577.1;Name=WP_167324577.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016929940.1;locus_tag=IY40_RS26375;product=hypothetical protein;protein_id=WP_167324577.1;transl_table=11 NZ_JPQY01000016.1 RefSeq gene 11657 12868 . - . ID=gene-IY40_RS11375;Name=IY40_RS11375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS11375;old_locus_tag=IY40_11560 NZ_JPQY01000016.1 Protein Homology CDS 11657 12868 . - 0 ID=cds-WP_043139780.1;Parent=gene-IY40_RS11375;Dbxref=GenBank:WP_043139780.1;Name=WP_043139780.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004931803.1;locus_tag=IY40_RS11375;product=CynX/NimT family MFS transporter;protein_id=WP_043139780.1;transl_table=11 NZ_JPQY01000016.1 RefSeq gene 13372 14145 . + . ID=gene-IY40_RS11380;Name=agaR;gbkey=Gene;gene=agaR;gene_biotype=protein_coding;locus_tag=IY40_RS11380;old_locus_tag=IY40_11570 NZ_JPQY01000016.1 Protein Homology CDS 13372 14145 . + 0 ID=cds-WP_004931804.1;Parent=gene-IY40_RS11380;Dbxref=GenBank:WP_004931804.1;Name=WP_004931804.1;gbkey=CDS;gene=agaR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004931804.1;locus_tag=IY40_RS11380;product=transcriptional repressor AgaR;protein_id=WP_004931804.1;transl_table=11 NZ_JPQY01000016.1 RefSeq gene 14169 15452 . + . ID=gene-IY40_RS11385;Name=IY40_RS11385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS11385;old_locus_tag=IY40_11575 NZ_JPQY01000016.1 Protein Homology CDS 14169 15452 . + 0 ID=cds-WP_043139785.1;Parent=gene-IY40_RS11385;Dbxref=GenBank:WP_043139785.1;Name=WP_043139785.1;Ontology_term=GO:0005975;gbkey=CDS;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004931807.1;locus_tag=IY40_RS11385;product=D-tagatose-bisphosphate aldolase%2C class II%2C non-catalytic subunit;protein_id=WP_043139785.1;transl_table=11 NZ_JPQY01000016.1 RefSeq gene 15454 15930 . + . ID=gene-IY40_RS11390;Name=agaV;gbkey=Gene;gene=agaV;gene_biotype=protein_coding;locus_tag=IY40_RS11390;old_locus_tag=IY40_11580 NZ_JPQY01000016.1 Protein Homology CDS 15454 15930 . + 0 ID=cds-WP_019455696.1;Parent=gene-IY40_RS11390;Dbxref=GenBank:WP_019455696.1;Name=WP_019455696.1;gbkey=CDS;gene=agaV;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012146550.1;locus_tag=IY40_RS11390;product=PTS N-acetylgalactosamine transporter subunit IIB;protein_id=WP_019455696.1;transl_table=11 NZ_JPQY01000016.1 RefSeq gene 15945 16724 . + . ID=gene-IY40_RS11395;Name=agaW;gbkey=Gene;gene=agaW;gene_biotype=protein_coding;locus_tag=IY40_RS11395;old_locus_tag=IY40_11585 NZ_JPQY01000016.1 Protein Homology CDS 15945 16724 . + 0 ID=cds-WP_019455697.1;Parent=gene-IY40_RS11395;Dbxref=GenBank:WP_019455697.1;Name=WP_019455697.1;gbkey=CDS;gene=agaW;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015378935.1;locus_tag=IY40_RS11395;product=PTS N-acetylgalactosamine transporter subunit IIC;protein_id=WP_019455697.1;transl_table=11 NZ_JPQY01000016.1 RefSeq gene 16714 17607 . + . ID=gene-IY40_RS11400;Name=IY40_RS11400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS11400;old_locus_tag=IY40_11590 NZ_JPQY01000016.1 Protein Homology CDS 16714 17607 . + 0 ID=cds-WP_025304087.1;Parent=gene-IY40_RS11400;Dbxref=GenBank:WP_025304087.1;Name=WP_025304087.1;Ontology_term=GO:0009401,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004931811.1;locus_tag=IY40_RS11400;product=PTS system mannose/fructose/sorbose family transporter subunit IID;protein_id=WP_025304087.1;transl_table=11 NZ_JPQY01000016.1 RefSeq gene 17618 18052 . + . ID=gene-IY40_RS11405;Name=agaF;gbkey=Gene;gene=agaF;gene_biotype=protein_coding;locus_tag=IY40_RS11405;old_locus_tag=IY40_11595 NZ_JPQY01000016.1 Protein Homology CDS 17618 18052 . + 0 ID=cds-WP_025304086.1;Parent=gene-IY40_RS11405;Dbxref=GenBank:WP_025304086.1;Name=WP_025304086.1;gbkey=CDS;gene=agaF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004931813.1;locus_tag=IY40_RS11405;product=PTS galactosamine/N-acetylgalactosamine transporter subunit IIA;protein_id=WP_025304086.1;transl_table=11 NZ_JPQY01000016.1 RefSeq gene 18089 19816 . - . ID=gene-IY40_RS11410;Name=IY40_RS11410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS11410;old_locus_tag=IY40_11600 NZ_JPQY01000016.1 Protein Homology CDS 18089 19816 . - 0 ID=cds-WP_043139791.1;Parent=gene-IY40_RS11410;Dbxref=GenBank:WP_043139791.1;Name=WP_043139791.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004952327.1;locus_tag=IY40_RS11410;product=ABC transporter ATP-binding protein/permease;protein_id=WP_043139791.1;transl_table=11 NZ_JPQY01000016.1 RefSeq gene 20022 20729 . + . ID=gene-IY40_RS11415;Name=IY40_RS11415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS11415;old_locus_tag=IY40_11605 NZ_JPQY01000016.1 Protein Homology CDS 20022 20729 . + 0 ID=cds-WP_025304084.1;Parent=gene-IY40_RS11415;Dbxref=GenBank:WP_025304084.1;Name=WP_025304084.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015378931.1;locus_tag=IY40_RS11415;product=hypothetical protein;protein_id=WP_025304084.1;transl_table=11 NZ_JPQY01000016.1 RefSeq gene 20758 21405 . - . ID=gene-IY40_RS11420;Name=IY40_RS11420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS11420;old_locus_tag=IY40_11610 NZ_JPQY01000016.1 Protein Homology CDS 20758 21405 . - 0 ID=cds-WP_043139796.1;Parent=gene-IY40_RS11420;Dbxref=GenBank:WP_043139796.1;Name=WP_043139796.1;Ontology_term=GO:0016667;gbkey=CDS;go_function=oxidoreductase activity%2C acting on a sulfur group of donors|0016667||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004931818.1;locus_tag=IY40_RS11420;product=DsbA family protein;protein_id=WP_043139796.1;transl_table=11 NZ_JPQY01000016.1 RefSeq gene 21474 22358 . - . ID=gene-IY40_RS11425;Name=IY40_RS11425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS11425;old_locus_tag=IY40_11615 NZ_JPQY01000016.1 Protein Homology CDS 21474 22358 . - 0 ID=cds-WP_025304082.1;Parent=gene-IY40_RS11425;Dbxref=GenBank:WP_025304082.1;Name=WP_025304082.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019082447.1;locus_tag=IY40_RS11425;product=MBL fold metallo-hydrolase;protein_id=WP_025304082.1;transl_table=11 NZ_JPQY01000016.1 RefSeq gene 22467 23375 . + . ID=gene-IY40_RS11430;Name=IY40_RS11430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS11430;old_locus_tag=IY40_11620 NZ_JPQY01000016.1 Protein Homology CDS 22467 23375 . + 0 ID=cds-WP_033644836.1;Parent=gene-IY40_RS11430;Dbxref=GenBank:WP_033644836.1;Name=WP_033644836.1;Ontology_term=GO:0006355,GO:0001216,GO:0032993;gbkey=CDS;go_component=protein-DNA complex|0032993||IEA;go_function=DNA-binding transcription activator activity|0001216||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209849.1;locus_tag=IY40_RS11430;product=LysR family transcriptional regulator;protein_id=WP_033644836.1;transl_table=11 NZ_JPQY01000016.1 RefSeq gene 23403 24326 . - . ID=gene-IY40_RS11435;Name=IY40_RS11435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS11435;old_locus_tag=IY40_11625 NZ_JPQY01000016.1 Protein Homology CDS 23403 24326 . - 0 ID=cds-WP_043139803.1;Parent=gene-IY40_RS11435;Dbxref=GenBank:WP_043139803.1;Name=WP_043139803.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006318927.1;locus_tag=IY40_RS11435;product=LysR family transcriptional regulator;protein_id=WP_043139803.1;transl_table=11 NZ_JPQY01000016.1 RefSeq gene 24460 25722 . + . ID=gene-IY40_RS11440;Name=lysA;gbkey=Gene;gene=lysA;gene_biotype=protein_coding;locus_tag=IY40_RS11440;old_locus_tag=IY40_11630 NZ_JPQY01000016.1 Protein Homology CDS 24460 25722 . + 0 ID=cds-WP_043139806.1;Parent=gene-IY40_RS11440;Dbxref=GenBank:WP_043139806.1;Name=WP_043139806.1;Ontology_term=GO:0009089,GO:0008836;gbkey=CDS;gene=lysA;go_function=diaminopimelate decarboxylase activity|0008836||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012303749.1;locus_tag=IY40_RS11440;product=diaminopimelate decarboxylase;protein_id=WP_043139806.1;transl_table=11 NZ_JPQY01000016.1 RefSeq gene 25750 26052 . - . ID=gene-IY40_RS11445;Name=IY40_RS11445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS11445;old_locus_tag=IY40_11635 NZ_JPQY01000016.1 Protein Homology CDS 25750 26052 . - 0 ID=cds-WP_025304078.1;Parent=gene-IY40_RS11445;Dbxref=GenBank:WP_025304078.1;Name=WP_025304078.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004931828.1;locus_tag=IY40_RS11445;product=helix-turn-helix domain-containing protein;protein_id=WP_025304078.1;transl_table=11 NZ_JPQY01000016.1 RefSeq gene 26058 26402 . - . ID=gene-IY40_RS11450;Name=IY40_RS11450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS11450;old_locus_tag=IY40_11640 NZ_JPQY01000016.1 Protein Homology CDS 26058 26402 . - 0 ID=cds-WP_043139810.1;Parent=gene-IY40_RS11450;Dbxref=GenBank:WP_043139810.1;Name=WP_043139810.1;Ontology_term=GO:0004519,GO:0090729,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=endonuclease activity|0004519||IEA,toxin activity|0090729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019455708.1;locus_tag=IY40_RS11450;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_043139810.1;transl_table=11 NZ_JPQY01000016.1 RefSeq gene 26561 27580 . - . ID=gene-IY40_RS11455;Name=galR;gbkey=Gene;gene=galR;gene_biotype=protein_coding;locus_tag=IY40_RS11455;old_locus_tag=IY40_11645 NZ_JPQY01000016.1 Protein Homology CDS 26561 27580 . - 0 ID=cds-WP_028127674.1;Parent=gene-IY40_RS11455;Dbxref=GenBank:WP_028127674.1;Name=WP_028127674.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=galR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004931832.1;locus_tag=IY40_RS11455;product=HTH-type transcriptional regulator GalR;protein_id=WP_028127674.1;transl_table=11 NZ_JPQY01000016.1 RefSeq gene 27801 30083 . + . ID=gene-IY40_RS11460;Name=IY40_RS11460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS11460;old_locus_tag=IY40_11650 NZ_JPQY01000016.1 Protein Homology CDS 27801 30083 . + 0 ID=cds-WP_043139815.1;Parent=gene-IY40_RS11460;Dbxref=GenBank:WP_043139815.1;Name=WP_043139815.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013649365.1;locus_tag=IY40_RS11460;product=molybdopterin guanine dinucleotide-containing S/N-oxide reductase;protein_id=WP_043139815.1;transl_table=11 NZ_JPQY01000016.1 RefSeq gene 30055 30609 . - . ID=gene-IY40_RS11465;Name=IY40_RS11465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS11465;old_locus_tag=IY40_11655 NZ_JPQY01000016.1 GeneMarkS-2+ CDS 30055 30609 . - 0 ID=cds-WP_043139818.1;Parent=gene-IY40_RS11465;Dbxref=GenBank:WP_043139818.1;Name=WP_043139818.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IY40_RS11465;product=hypothetical protein;protein_id=WP_043139818.1;transl_table=11 NZ_JPQY01000016.1 RefSeq gene 30635 33046 . - . ID=gene-IY40_RS11470;Name=IY40_RS11470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS11470;old_locus_tag=IY40_11660 NZ_JPQY01000016.1 Protein Homology CDS 30635 33046 . - 0 ID=cds-WP_043139821.1;Parent=gene-IY40_RS11470;Dbxref=GenBank:WP_043139821.1;Name=WP_043139821.1;Ontology_term=GO:0009297,GO:0015473,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=fimbrial usher porin activity|0015473||IEA;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: protein motif:HMM:NF012786.6;locus_tag=IY40_RS11470;product=fimbria/pilus outer membrane usher protein;protein_id=WP_043139821.1;transl_table=11 NZ_JPQY01000016.1 RefSeq gene 33055 33765 . - . ID=gene-IY40_RS11475;Name=IY40_RS11475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS11475;old_locus_tag=IY40_11665 NZ_JPQY01000016.1 Protein Homology CDS 33055 33765 . - 0 ID=cds-WP_043139824.1;Parent=gene-IY40_RS11475;Dbxref=GenBank:WP_043139824.1;Name=WP_043139824.1;Ontology_term=GO:0071555,GO:0030288;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_process=cell wall organization|0071555||IEA;inference=COORDINATES: protein motif:HMM:NF012565.6;locus_tag=IY40_RS11475;product=fimbria/pilus periplasmic chaperone;protein_id=WP_043139824.1;transl_table=11 NZ_JPQY01000016.1 RefSeq gene 33878 34567 . - . ID=gene-IY40_RS11480;Name=IY40_RS11480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS11480;old_locus_tag=IY40_11670 NZ_JPQY01000016.1 GeneMarkS-2+ CDS 33878 34567 . - 0 ID=cds-WP_144334748.1;Parent=gene-IY40_RS11480;Dbxref=GenBank:WP_144334748.1;Name=WP_144334748.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IY40_RS11480;product=fimbrial protein;protein_id=WP_144334748.1;transl_table=11 NZ_JPQY01000016.1 RefSeq gene 35497 37650 . + . ID=gene-IY40_RS11485;Name=aas;gbkey=Gene;gene=aas;gene_biotype=protein_coding;locus_tag=IY40_RS11485;old_locus_tag=IY40_11675 NZ_JPQY01000016.1 Protein Homology CDS 35497 37650 . + 0 ID=cds-WP_043139830.1;Parent=gene-IY40_RS11485;Dbxref=GenBank:WP_043139830.1;Name=WP_043139830.1;Ontology_term=GO:0006631,GO:0008654,GO:0008779,GO:0008922;gbkey=CDS;gene=aas;go_function=acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase activity|0008779||IEA,long-chain fatty acid [acyl-carrier-protein] ligase activity|0008922||IEA;go_process=fatty acid metabolic process|0006631||IEA,phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019455711.1;locus_tag=IY40_RS11485;product=bifunctional acyl-ACP--phospholipid O-acyltransferase/long-chain-fatty-acid--ACP ligase;protein_id=WP_043139830.1;transl_table=11 NZ_JPQY01000016.1 RefSeq gene 37650 38834 . + . ID=gene-IY40_RS11490;Name=lplT;gbkey=Gene;gene=lplT;gene_biotype=protein_coding;locus_tag=IY40_RS11490;old_locus_tag=IY40_11680 NZ_JPQY01000016.1 Protein Homology CDS 37650 38834 . + 0 ID=cds-WP_043139832.1;Parent=gene-IY40_RS11490;Dbxref=GenBank:WP_043139832.1;Name=WP_043139832.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=lplT;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004931838.1;locus_tag=IY40_RS11490;product=lysophospholipid transporter LplT;protein_id=WP_043139832.1;transl_table=11 NZ_JPQY01000016.1 RefSeq gene 38868 39908 . - . ID=gene-IY40_RS11495;Name=IY40_RS11495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS11495;old_locus_tag=IY40_11685 NZ_JPQY01000016.1 Protein Homology CDS 38868 39908 . - 0 ID=cds-WP_043139835.1;Parent=gene-IY40_RS11495;Dbxref=GenBank:WP_043139835.1;Name=WP_043139835.1;Ontology_term=GO:0047834;gbkey=CDS;go_function=D-threo-aldose 1-dehydrogenase activity|0047834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005165364.1;locus_tag=IY40_RS11495;product=NADP(H)-dependent aldo-keto reductase;protein_id=WP_043139835.1;transl_table=11 NZ_JPQY01000016.1 RefSeq gene 40114 40332 . - . ID=gene-IY40_RS11500;Name=IY40_RS11500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS11500;old_locus_tag=IY40_11690 NZ_JPQY01000016.1 Protein Homology CDS 40114 40332 . - 0 ID=cds-WP_016929923.1;Parent=gene-IY40_RS11500;Dbxref=GenBank:WP_016929923.1;Name=WP_016929923.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008499668.1;locus_tag=IY40_RS11500;product=YgdI/YgdR family lipoprotein;protein_id=WP_016929923.1;transl_table=11 NZ_JPQY01000016.1 RefSeq gene 40488 41204 . - . ID=gene-IY40_RS11505;Name=IY40_RS11505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS11505;old_locus_tag=IY40_11695 NZ_JPQY01000016.1 Protein Homology CDS 40488 41204 . - 0 ID=cds-WP_025304068.1;Parent=gene-IY40_RS11505;Dbxref=GenBank:WP_025304068.1;Name=WP_025304068.1;Ontology_term=GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004952286.1;locus_tag=IY40_RS11505;product=TerC family protein;protein_id=WP_025304068.1;transl_table=11 NZ_JPQY01000016.1 RefSeq gene 41305 41991 . - . ID=gene-IY40_RS11510;Name=mutH;gbkey=Gene;gene=mutH;gene_biotype=protein_coding;locus_tag=IY40_RS11510;old_locus_tag=IY40_11700 NZ_JPQY01000016.1 Protein Homology CDS 41305 41991 . - 0 ID=cds-WP_025304067.1;Parent=gene-IY40_RS11510;Dbxref=GenBank:WP_025304067.1;Name=WP_025304067.1;Ontology_term=GO:0006304,GO:0004519;gbkey=CDS;gene=mutH;go_function=endonuclease activity|0004519||IEA;go_process=DNA modification|0006304||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012146528.1;locus_tag=IY40_RS11510;product=DNA mismatch repair endonuclease MutH;protein_id=WP_025304067.1;transl_table=11 NZ_JPQY01000016.1 RefSeq gene 42688 43215 . + . ID=gene-IY40_RS11515;Name=rppH;gbkey=Gene;gene=rppH;gene_biotype=protein_coding;locus_tag=IY40_RS11515;old_locus_tag=IY40_11705 NZ_JPQY01000016.1 Protein Homology CDS 42688 43215 . + 0 ID=cds-WP_004931849.1;Parent=gene-IY40_RS11515;Dbxref=GenBank:WP_004931849.1;Name=WP_004931849.1;Ontology_term=GO:0016787;gbkey=CDS;gene=rppH;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228602.1;locus_tag=IY40_RS11515;product=RNA pyrophosphohydrolase;protein_id=WP_004931849.1;transl_table=11 NZ_JPQY01000016.1 RefSeq gene 43228 45474 . + . ID=gene-IY40_RS11520;Name=ptsP;gbkey=Gene;gene=ptsP;gene_biotype=protein_coding;locus_tag=IY40_RS11520;old_locus_tag=IY40_11710 NZ_JPQY01000016.1 Protein Homology CDS 43228 45474 . + 0 ID=cds-WP_043139841.1;Parent=gene-IY40_RS11520;Dbxref=GenBank:WP_043139841.1;Name=WP_043139841.1;gbkey=CDS;gene=ptsP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019078930.1;locus_tag=IY40_RS11520;product=phosphoenolpyruvate--protein phosphotransferase;protein_id=WP_043139841.1;transl_table=11 NZ_JPQY01000016.1 RefSeq gene 45697 46569 . + . ID=gene-IY40_RS11525;Name=lgt;gbkey=Gene;gene=lgt;gene_biotype=protein_coding;locus_tag=IY40_RS11525;old_locus_tag=IY40_11715 NZ_JPQY01000016.1 Protein Homology CDS 45697 46569 . + 0 ID=cds-WP_016929919.1;Parent=gene-IY40_RS11525;Dbxref=GenBank:WP_016929919.1;Name=WP_016929919.1;Ontology_term=GO:0009249,GO:0008961,GO:0016020;gbkey=CDS;gene=lgt;go_component=membrane|0016020||IEA;go_function=phosphatidylglycerol-prolipoprotein diacylglyceryl transferase activity|0008961||IEA;go_process=protein lipoylation|0009249||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005173313.1;locus_tag=IY40_RS11525;product=prolipoprotein diacylglyceryl transferase;protein_id=WP_016929919.1;transl_table=11 NZ_JPQY01000016.1 RefSeq gene 46577 47371 . + . ID=gene-IY40_RS11530;Name=thyA;gbkey=Gene;gene=thyA;gene_biotype=protein_coding;locus_tag=IY40_RS11530;old_locus_tag=IY40_11720 NZ_JPQY01000016.1 Protein Homology CDS 46577 47371 . + 0 ID=cds-WP_043139847.1;Parent=gene-IY40_RS11530;Dbxref=GenBank:WP_043139847.1;Name=WP_043139847.1;Ontology_term=GO:0006231,GO:0004799;gbkey=CDS;gene=thyA;go_function=thymidylate synthase activity|0004799||IEA;go_process=dTMP biosynthetic process|0006231||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228599.1;locus_tag=IY40_RS11530;product=thymidylate synthase;protein_id=WP_043139847.1;transl_table=11 NZ_JPQY01000016.1 RefSeq gene 47546 48049 . + . ID=gene-IY40_RS11535;Name=IY40_RS11535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS11535;old_locus_tag=IY40_11725 NZ_JPQY01000016.1 Protein Homology CDS 47546 48049 . + 0 ID=cds-WP_025304064.1;Parent=gene-IY40_RS11535;Dbxref=GenBank:WP_025304064.1;Name=WP_025304064.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015378918.1;locus_tag=IY40_RS11535;product=prepilin peptidase-dependent protein;protein_id=WP_025304064.1;transl_table=11 NZ_JPQY01000016.1 RefSeq gene 48043 48621 . + . ID=gene-IY40_RS11540;Name=IY40_RS11540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS11540;old_locus_tag=IY40_11730 NZ_JPQY01000016.1 Protein Homology CDS 48043 48621 . + 0 ID=cds-WP_043139850.1;Parent=gene-IY40_RS11540;Dbxref=GenBank:WP_043139850.1;Name=WP_043139850.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015378917.1;locus_tag=IY40_RS11540;product=prepilin peptidase-dependent protein;protein_id=WP_043139850.1;transl_table=11 NZ_JPQY01000016.1 RefSeq gene 48618 49064 . + . ID=gene-IY40_RS11545;Name=IY40_RS11545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS11545;old_locus_tag=IY40_11735 NZ_JPQY01000016.1 Protein Homology CDS 48618 49064 . + 0 ID=cds-WP_043139853.1;Parent=gene-IY40_RS11545;Dbxref=GenBank:WP_043139853.1;Name=WP_043139853.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019455722.1;locus_tag=IY40_RS11545;product=YgdB family protein;protein_id=WP_043139853.1;transl_table=11 NZ_JPQY01000016.1 RefSeq gene 49057 49410 . + . ID=gene-IY40_RS11550;Name=IY40_RS11550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS11550;old_locus_tag=IY40_11740 NZ_JPQY01000016.1 Protein Homology CDS 49057 49410 . + 0 ID=cds-WP_043139856.1;Parent=gene-IY40_RS11550;Dbxref=GenBank:WP_043139856.1;Name=WP_043139856.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015378915.1;locus_tag=IY40_RS11550;product=prepilin-type N-terminal cleavage/methylation domain-containing protein;protein_id=WP_043139856.1;transl_table=11 NZ_JPQY01000016.1 RefSeq gene 49443 52814 . + . ID=gene-IY40_RS11555;Name=recC;gbkey=Gene;gene=recC;gene_biotype=protein_coding;locus_tag=IY40_RS11555;old_locus_tag=IY40_11745 NZ_JPQY01000016.1 Protein Homology CDS 49443 52814 . + 0 ID=cds-WP_043139861.1;Parent=gene-IY40_RS11555;Dbxref=GenBank:WP_043139861.1;Name=WP_043139861.1;Ontology_term=GO:0008854,GO:0009338;gbkey=CDS;gene=recC;go_component=exodeoxyribonuclease V complex|0009338||IEA;go_function=exodeoxyribonuclease V activity|0008854||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013814289.1;locus_tag=IY40_RS11555;product=exodeoxyribonuclease V subunit gamma;protein_id=WP_043139861.1;transl_table=11 NZ_JPQY01000016.1 RefSeq gene 53046 55934 . + . ID=gene-IY40_RS11560;Name=ptrA;gbkey=Gene;gene=ptrA;gene_biotype=protein_coding;locus_tag=IY40_RS11560;old_locus_tag=IY40_11750 NZ_JPQY01000016.1 Protein Homology CDS 53046 55934 . + 0 ID=cds-WP_043139956.1;Parent=gene-IY40_RS11560;Dbxref=GenBank:WP_043139956.1;Name=WP_043139956.1;Ontology_term=GO:0006508,GO:0004222,GO:0046872;gbkey=CDS;gene=ptrA;go_function=metalloendopeptidase activity|0004222||IEA,metal ion binding|0046872||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012303752.1;locus_tag=IY40_RS11560;product=pitrilysin;protein_id=WP_043139956.1;transl_table=11 NZ_JPQY01000016.1 RefSeq gene 55931 59482 . + . ID=gene-IY40_RS11565;Name=recB;gbkey=Gene;gene=recB;gene_biotype=protein_coding;locus_tag=IY40_RS11565;old_locus_tag=IY40_11755 NZ_JPQY01000016.1 Protein Homology CDS 55931 59482 . + 0 ID=cds-WP_043139865.1;Parent=gene-IY40_RS11565;Dbxref=GenBank:WP_043139865.1;Name=WP_043139865.1;Ontology_term=GO:0006281,GO:0003677,GO:0003678,GO:0005524,GO:0008854;gbkey=CDS;gene=recB;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA,exodeoxyribonuclease V activity|0008854||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017893807.1;locus_tag=IY40_RS11565;product=exodeoxyribonuclease V subunit beta;protein_id=WP_043139865.1;transl_table=11 NZ_JPQY01000016.1 RefSeq gene 59479 61329 . + . ID=gene-IY40_RS11570;Name=recD;gbkey=Gene;gene=recD;gene_biotype=protein_coding;locus_tag=IY40_RS11570;old_locus_tag=IY40_11760 NZ_JPQY01000016.1 Protein Homology CDS 59479 61329 . + 0 ID=cds-WP_043139870.1;Parent=gene-IY40_RS11570;Dbxref=GenBank:WP_043139870.1;Name=WP_043139870.1;Ontology_term=GO:0006302,GO:0006310,GO:0004386,GO:0008854,GO:0009338;gbkey=CDS;gene=recD;go_component=exodeoxyribonuclease V complex|0009338||IEA;go_function=helicase activity|0004386||IEA,exodeoxyribonuclease V activity|0008854||IEA;go_process=double-strand break repair|0006302||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004931878.1;locus_tag=IY40_RS11570;product=exodeoxyribonuclease V subunit alpha;protein_id=WP_043139870.1;transl_table=11 NZ_JPQY01000016.1 RefSeq gene 61368 62693 . - . ID=gene-IY40_RS11575;Name=argA;gbkey=Gene;gene=argA;gene_biotype=protein_coding;locus_tag=IY40_RS11575;old_locus_tag=IY40_11765 NZ_JPQY01000016.1 Protein Homology CDS 61368 62693 . - 0 ID=cds-WP_025304056.1;Parent=gene-IY40_RS11575;Dbxref=GenBank:WP_025304056.1;Name=WP_025304056.1;Ontology_term=GO:0006526,GO:0004042;gbkey=CDS;gene=argA;go_function=L-glutamate N-acetyltransferase activity|0004042||IEA;go_process=L-arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006318963.1;locus_tag=IY40_RS11575;product=amino-acid N-acetyltransferase;protein_id=WP_025304056.1;transl_table=11 NZ_JPQY01000016.1 RefSeq gene 62935 64188 . + . ID=gene-IY40_RS11580;Name=amiC;gbkey=Gene;gene=amiC;gene_biotype=protein_coding;locus_tag=IY40_RS11580;old_locus_tag=IY40_11770 NZ_JPQY01000016.1 Protein Homology CDS 62935 64188 . + 0 ID=cds-WP_004931882.1;Parent=gene-IY40_RS11580;Dbxref=GenBank:WP_004931882.1;Name=WP_004931882.1;Ontology_term=GO:0009253,GO:0008745;gbkey=CDS;gene=amiC;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019455729.1;locus_tag=IY40_RS11580;product=N-acetylmuramoyl-L-alanine amidase AmiC;protein_id=WP_004931882.1;transl_table=11 NZ_JPQY01000016.1 RefSeq gene 64279 64355 . - . ID=gene-IY40_RS11585;Name=IY40_RS11585;gbkey=Gene;gene_biotype=tRNA;locus_tag=IY40_RS11585;old_locus_tag=IY40_11775 NZ_JPQY01000016.1 tRNAscan-SE tRNA 64279 64355 . - . ID=rna-IY40_RS11585;Parent=gene-IY40_RS11585;anticodon=(pos:complement(64319..64321));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=IY40_RS11585;product=tRNA-Met NZ_JPQY01000016.1 tRNAscan-SE exon 64279 64355 . - . ID=exon-IY40_RS11585-1;Parent=rna-IY40_RS11585;anticodon=(pos:complement(64319..64321));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=IY40_RS11585;product=tRNA-Met NZ_JPQY01000016.1 RefSeq gene 64421 64497 . - . ID=gene-IY40_RS11590;Name=IY40_RS11590;gbkey=Gene;gene_biotype=tRNA;locus_tag=IY40_RS11590;old_locus_tag=IY40_11780 NZ_JPQY01000016.1 tRNAscan-SE tRNA 64421 64497 . - . ID=rna-IY40_RS11590;Parent=gene-IY40_RS11590;anticodon=(pos:complement(64461..64463));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=IY40_RS11590;product=tRNA-Met NZ_JPQY01000016.1 tRNAscan-SE exon 64421 64497 . - . ID=exon-IY40_RS11590-1;Parent=rna-IY40_RS11590;anticodon=(pos:complement(64461..64463));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=IY40_RS11590;product=tRNA-Met NZ_JPQY01000016.1 RefSeq gene 64555 64631 . - . ID=gene-IY40_RS11595;Name=IY40_RS11595;gbkey=Gene;gene_biotype=tRNA;locus_tag=IY40_RS11595;old_locus_tag=IY40_11785 NZ_JPQY01000016.1 tRNAscan-SE tRNA 64555 64631 . - . ID=rna-IY40_RS11595;Parent=gene-IY40_RS11595;anticodon=(pos:complement(64595..64597));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=IY40_RS11595;product=tRNA-Met NZ_JPQY01000016.1 tRNAscan-SE exon 64555 64631 . - . ID=exon-IY40_RS11595-1;Parent=rna-IY40_RS11595;anticodon=(pos:complement(64595..64597));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=IY40_RS11595;product=tRNA-Met NZ_JPQY01000016.1 RefSeq gene 64848 65984 . + . ID=gene-IY40_RS11600;Name=mltA;gbkey=Gene;gene=mltA;gene_biotype=protein_coding;locus_tag=IY40_RS11600;old_locus_tag=IY40_11790 NZ_JPQY01000016.1 Protein Homology CDS 64848 65984 . + 0 ID=cds-WP_043139874.1;Parent=gene-IY40_RS11600;Dbxref=GenBank:WP_043139874.1;Name=WP_043139874.1;Ontology_term=GO:0009254,GO:0004553,GO:0019867;gbkey=CDS;gene=mltA;go_component=outer membrane|0019867||IEA;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=peptidoglycan turnover|0009254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013814284.1;locus_tag=IY40_RS11600;product=murein transglycosylase A;protein_id=WP_043139874.1;transl_table=11 NZ_JPQY01000016.1 RefSeq gene 66069 66875 . + . ID=gene-IY40_RS11605;Name=tcdA;gbkey=Gene;gene=tcdA;gene_biotype=protein_coding;locus_tag=IY40_RS11605;old_locus_tag=IY40_11795 NZ_JPQY01000016.1 Protein Homology CDS 66069 66875 . + 0 ID=cds-WP_025304053.1;Parent=gene-IY40_RS11605;Dbxref=GenBank:WP_025304053.1;Name=WP_025304053.1;Ontology_term=GO:0008641;gbkey=CDS;gene=tcdA;go_function=ubiquitin-like modifier activating enzyme activity|0008641||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015673582.1;locus_tag=IY40_RS11605;product=tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA;protein_id=WP_025304053.1;transl_table=11 NZ_JPQY01000016.1 RefSeq gene 66866 67300 . - . ID=gene-IY40_RS11610;Name=csdE;gbkey=Gene;gene=csdE;gene_biotype=protein_coding;locus_tag=IY40_RS11610;old_locus_tag=IY40_11800 NZ_JPQY01000016.1 Protein Homology CDS 66866 67300 . - 0 ID=cds-WP_025304052.1;Parent=gene-IY40_RS11610;Dbxref=GenBank:WP_025304052.1;Name=WP_025304052.1;Ontology_term=GO:0016226,GO:0031071;gbkey=CDS;gene=csdE;go_function=cysteine desulfurase activity|0031071||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015378908.1;locus_tag=IY40_RS11610;product=cysteine desulfurase sulfur acceptor subunit CsdE;protein_id=WP_025304052.1;transl_table=11 NZ_JPQY01000016.1 RefSeq gene 67320 68525 . - . ID=gene-IY40_RS11615;Name=csdA;gbkey=Gene;gene=csdA;gene_biotype=protein_coding;locus_tag=IY40_RS11615;old_locus_tag=IY40_11805 NZ_JPQY01000016.1 Protein Homology CDS 67320 68525 . - 0 ID=cds-WP_043139879.1;Parent=gene-IY40_RS11615;Dbxref=GenBank:WP_043139879.1;Name=WP_043139879.1;Ontology_term=GO:0006534,GO:0016226,GO:0030170,GO:0031071;gbkey=CDS;gene=csdA;go_function=pyridoxal phosphate binding|0030170||IEA,cysteine desulfurase activity|0031071||IEA;go_process=cysteine metabolic process|0006534||IEA,iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015378907.1;locus_tag=IY40_RS11615;product=cysteine desulfurase CsdA;protein_id=WP_043139879.1;transl_table=11 NZ_JPQY01000016.1 RefSeq gene 68722 68946 . + . ID=gene-IY40_RS11620;Name=IY40_RS11620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS11620;old_locus_tag=IY40_11810 NZ_JPQY01000016.1 Protein Homology CDS 68722 68946 . + 0 ID=cds-WP_025304050.1;Parent=gene-IY40_RS11620;Dbxref=GenBank:WP_025304050.1;Name=WP_025304050.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417289.2;locus_tag=IY40_RS11620;product=YgdI/YgdR family lipoprotein;protein_id=WP_025304050.1;transl_table=11 NZ_JPQY01000016.1 RefSeq gene 69332 70249 . + . ID=gene-IY40_RS11625;Name=IY40_RS11625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS11625;old_locus_tag=IY40_11815 NZ_JPQY01000016.1 Protein Homology CDS 69332 70249 . + 0 ID=cds-WP_025304049.1;Parent=gene-IY40_RS11625;Dbxref=GenBank:WP_025304049.1;Name=WP_025304049.1;Ontology_term=GO:0006351,GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA-templated transcription|0006351||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130970.1;locus_tag=IY40_RS11625;product=transcriptional regulator GcvA;protein_id=WP_025304049.1;transl_table=11 NZ_JPQY01000016.1 RefSeq gene 70301 70696 . + . ID=gene-IY40_RS11630;Name=IY40_RS11630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS11630;old_locus_tag=IY40_11820 NZ_JPQY01000016.1 Protein Homology CDS 70301 70696 . + 0 ID=cds-WP_004931896.1;Parent=gene-IY40_RS11630;Dbxref=GenBank:WP_004931896.1;Name=WP_004931896.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212118.1;locus_tag=IY40_RS11630;product=DUF423 domain-containing protein;protein_id=WP_004931896.1;transl_table=11 NZ_JPQY01000016.1 RefSeq gene 70689 71792 . + . ID=gene-IY40_RS11635;Name=rlmM;gbkey=Gene;gene=rlmM;gene_biotype=protein_coding;locus_tag=IY40_RS11635;old_locus_tag=IY40_11825 NZ_JPQY01000016.1 Protein Homology CDS 70689 71792 . + 0 ID=cds-WP_019455735.1;Parent=gene-IY40_RS11635;Dbxref=GenBank:WP_019455735.1;Name=WP_019455735.1;Ontology_term=GO:0008168;gbkey=CDS;gene=rlmM;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012146506.1;locus_tag=IY40_RS11635;product=23S rRNA (cytidine(2498)-2'-O)-methyltransferase RlmM;protein_id=WP_019455735.1;transl_table=11 NZ_JPQY01000016.1 RefSeq gene 71832 72590 . - . ID=gene-IY40_RS11640;Name=xni;gbkey=Gene;gene=xni;gene_biotype=protein_coding;locus_tag=IY40_RS11640;old_locus_tag=IY40_11830 NZ_JPQY01000016.1 Protein Homology CDS 71832 72590 . - 0 ID=cds-WP_025304047.1;Parent=gene-IY40_RS11640;Dbxref=GenBank:WP_025304047.1;Name=WP_025304047.1;Ontology_term=GO:0033567,GO:0003677,GO:0017108;gbkey=CDS;gene=xni;go_function=DNA binding|0003677||IEA,5'-flap endonuclease activity|0017108||IEA;go_process=DNA replication%2C Okazaki fragment processing|0033567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015378904.1;locus_tag=IY40_RS11640;product=flap endonuclease Xni;protein_id=WP_025304047.1;transl_table=11 NZ_JPQY01000016.1 RefSeq gene 72645 74009 . - . ID=gene-IY40_RS11645;Name=ppnN;gbkey=Gene;gene=ppnN;gene_biotype=protein_coding;locus_tag=IY40_RS11645;old_locus_tag=IY40_11835 NZ_JPQY01000016.1 Protein Homology CDS 72645 74009 . - 0 ID=cds-WP_019455737.1;Parent=gene-IY40_RS11645;Dbxref=GenBank:WP_019455737.1;Name=WP_019455737.1;gbkey=CDS;gene=ppnN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461889.1;locus_tag=IY40_RS11645;product=nucleotide 5'-monophosphate nucleosidase PpnN;protein_id=WP_019455737.1;transl_table=11 NZ_JPQY01000016.1 RefSeq gene 74202 75047 . - . ID=gene-IY40_RS11650;Name=queF;gbkey=Gene;gene=queF;gene_biotype=protein_coding;locus_tag=IY40_RS11650;old_locus_tag=IY40_11840 NZ_JPQY01000016.1 Protein Homology CDS 74202 75047 . - 0 ID=cds-WP_043139883.1;Parent=gene-IY40_RS11650;Dbxref=GenBank:WP_043139883.1;Name=WP_043139883.1;Note=Catalyzes the NADPH-dependent reduction of 7-cyano-7-deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) in queuosine biosynthesis;Ontology_term=GO:0008616,GO:0033739,GO:0043867;gbkey=CDS;gene=queF;go_function=preQ1 synthase activity|0033739||IEA,7-cyano-7-deazaguanine tRNA-ribosyltransferase activity|0043867||IEA;go_process=tRNA queuosine(34) biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013649376.1;locus_tag=IY40_RS11650;product=NADPH-dependent 7-cyano-7-deazaguanine reductase QueF;protein_id=WP_043139883.1;transl_table=11 NZ_JPQY01000016.1 RefSeq gene 75111 75659 . + . ID=gene-IY40_RS11655;Name=syd;gbkey=Gene;gene=syd;gene_biotype=protein_coding;locus_tag=IY40_RS11655;old_locus_tag=IY40_11845 NZ_JPQY01000016.1 Protein Homology CDS 75111 75659 . + 0 ID=cds-WP_025304045.1;Parent=gene-IY40_RS11655;Dbxref=GenBank:WP_025304045.1;Name=WP_025304045.1;Ontology_term=GO:0009898;gbkey=CDS;gene=syd;go_component=cytoplasmic side of plasma membrane|0009898||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015378901.1;locus_tag=IY40_RS11655;product=SecY-interacting protein;protein_id=WP_025304045.1;transl_table=11 NZ_JPQY01000016.1 RefSeq gene 76268 77506 . - . ID=gene-IY40_RS11660;Name=IY40_RS11660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS11660;old_locus_tag=IY40_11855 NZ_JPQY01000016.1 Protein Homology CDS 76268 77506 . - 0 ID=cds-WP_025304044.1;Parent=gene-IY40_RS11660;Dbxref=GenBank:WP_025304044.1;Name=WP_025304044.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017893797.1;locus_tag=IY40_RS11660;product=MFS transporter;protein_id=WP_025304044.1;transl_table=11 NZ_JPQY01000016.1 RefSeq gene 77685 78011 . + . ID=gene-IY40_RS11665;Name=IY40_RS11665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS11665;old_locus_tag=IY40_11860 NZ_JPQY01000016.1 Protein Homology CDS 77685 78011 . + 0 ID=cds-WP_025304043.1;Parent=gene-IY40_RS11665;Dbxref=GenBank:WP_025304043.1;Name=WP_025304043.1;Ontology_term=GO:0044010;gbkey=CDS;go_process=single-species biofilm formation|0044010||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006708911.1;locus_tag=IY40_RS11665;product=YqcC family protein;protein_id=WP_025304043.1;transl_table=11 NZ_JPQY01000016.1 RefSeq gene 78158 84133 . + . ID=gene-IY40_RS11670;Name=IY40_RS11670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS11670;old_locus_tag=IY40_11865 NZ_JPQY01000016.1 Protein Homology CDS 78158 84133 . + 0 ID=cds-WP_043139887.1;Parent=gene-IY40_RS11670;Dbxref=GenBank:WP_043139887.1;Name=WP_043139887.1;Ontology_term=GO:0010951,GO:0004866;gbkey=CDS;go_function=endopeptidase inhibitor activity|0004866||IEA;go_process=negative regulation of endopeptidase activity|0010951||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004931913.1;locus_tag=IY40_RS11670;product=alpha-2-macroglobulin family protein;protein_id=WP_043139887.1;transl_table=11 NZ_JPQY01000016.1 RefSeq gene 84183 86531 . + . ID=gene-IY40_RS11675;Name=pbpC;gbkey=Gene;gene=pbpC;gene_biotype=protein_coding;locus_tag=IY40_RS11675;old_locus_tag=IY40_11870 NZ_JPQY01000016.1 Protein Homology CDS 84183 86531 . + 0 ID=cds-WP_043139891.1;Parent=gene-IY40_RS11675;Dbxref=GenBank:WP_043139891.1;Name=WP_043139891.1;Ontology_term=GO:0009252,GO:0003824,GO:0009274;gbkey=CDS;gene=pbpC;go_component=peptidoglycan-based cell wall|0009274||IEA;go_function=catalytic activity|0003824||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004931916.1;locus_tag=IY40_RS11675;product=penicillin-binding protein 1C;protein_id=WP_043139891.1;transl_table=11 NZ_JPQY01000016.1 RefSeq gene 86592 87362 . + . ID=gene-IY40_RS11680;Name=truC;gbkey=Gene;gene=truC;gene_biotype=protein_coding;locus_tag=IY40_RS11680;old_locus_tag=IY40_11875 NZ_JPQY01000016.1 Protein Homology CDS 86592 87362 . + 0 ID=cds-WP_043139895.1;Parent=gene-IY40_RS11680;Dbxref=GenBank:WP_043139895.1;Name=WP_043139895.1;Ontology_term=GO:0001522,GO:0009982;gbkey=CDS;gene=truC;go_function=pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004931925.1;locus_tag=IY40_RS11680;product=tRNA pseudouridine(65) synthase TruC;protein_id=WP_043139895.1;transl_table=11 NZ_JPQY01000016.1 RefSeq gene 87396 87848 . + . ID=gene-IY40_RS11685;Name=IY40_RS11685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS11685;old_locus_tag=IY40_11880 NZ_JPQY01000016.1 Protein Homology CDS 87396 87848 . + 0 ID=cds-WP_033644870.1;Parent=gene-IY40_RS11685;Dbxref=GenBank:WP_033644870.1;Name=WP_033644870.1;Ontology_term=GO:0010181;gbkey=CDS;go_function=FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016929894.1;locus_tag=IY40_RS11685;product=flavodoxin;protein_id=WP_033644870.1;transl_table=11 NZ_JPQY01000016.1 RefSeq gene 87906 88295 . - . ID=gene-IY40_RS11690;Name=IY40_RS11690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS11690;old_locus_tag=IY40_11885 NZ_JPQY01000016.1 Protein Homology CDS 87906 88295 . - 0 ID=cds-WP_004931929.1;Parent=gene-IY40_RS11690;Dbxref=GenBank:WP_004931929.1;Name=WP_004931929.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006318690.1;locus_tag=IY40_RS11690;product=DUF3461 family protein;protein_id=WP_004931929.1;transl_table=11 NZ_JPQY01000016.1 RefSeq gene 88425 89249 . - . ID=gene-IY40_RS11695;Name=dapD;gbkey=Gene;gene=dapD;gene_biotype=protein_coding;locus_tag=IY40_RS11695;old_locus_tag=IY40_11890 NZ_JPQY01000016.1 Protein Homology CDS 88425 89249 . - 0 ID=cds-WP_025304039.1;Parent=gene-IY40_RS11695;Dbxref=GenBank:WP_025304039.1;Name=WP_025304039.1;Ontology_term=GO:0009089,GO:0008666;gbkey=CDS;gene=dapD;go_function=2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxylate N-succinyltransferase activity|0008666||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132123.1;locus_tag=IY40_RS11695;product=2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxylate N-succinyltransferase;protein_id=WP_025304039.1;transl_table=11 NZ_JPQY01000016.1 RefSeq gene 89292 91955 . - . ID=gene-IY40_RS11700;Name=glnD;gbkey=Gene;gene=glnD;gene_biotype=protein_coding;locus_tag=IY40_RS11700;old_locus_tag=IY40_11895 NZ_JPQY01000016.1 Protein Homology CDS 89292 91955 . - 0 ID=cds-WP_043139899.1;Parent=gene-IY40_RS11700;Dbxref=GenBank:WP_043139899.1;Name=WP_043139899.1;Ontology_term=GO:0008152,GO:0016779;gbkey=CDS;gene=glnD;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015673565.1;locus_tag=IY40_RS11700;product=bifunctional uridylyltransferase/uridylyl-removing protein GlnD;protein_id=WP_043139899.1;transl_table=11 NZ_JPQY01000016.1 RefSeq gene 92029 92823 . - . ID=gene-IY40_RS11705;Name=map;gbkey=Gene;gene=map;gene_biotype=protein_coding;locus_tag=IY40_RS11705;old_locus_tag=IY40_11900 NZ_JPQY01000016.1 Protein Homology CDS 92029 92823 . - 0 ID=cds-WP_004931936.1;Parent=gene-IY40_RS11705;Dbxref=GenBank:WP_004931936.1;Name=WP_004931936.1;Ontology_term=GO:0006508,GO:0070006;gbkey=CDS;gene=map;go_function=metalloaminopeptidase activity|0070006||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006318688.1;locus_tag=IY40_RS11705;product=type I methionyl aminopeptidase;protein_id=WP_004931936.1;transl_table=11 NZ_JPQY01000016.1 RefSeq gene 93169 93894 . + . ID=gene-IY40_RS11710;Name=rpsB;gbkey=Gene;gene=rpsB;gene_biotype=protein_coding;locus_tag=IY40_RS11710;old_locus_tag=IY40_11905 NZ_JPQY01000016.1 Protein Homology CDS 93169 93894 . + 0 ID=cds-WP_016929891.1;Parent=gene-IY40_RS11710;Dbxref=GenBank:WP_016929891.1;Name=WP_016929891.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsB;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132117.1;locus_tag=IY40_RS11710;product=30S ribosomal protein S2;protein_id=WP_016929891.1;transl_table=11 NZ_JPQY01000016.1 RefSeq gene 94024 94875 . + . ID=gene-IY40_RS11715;Name=tsf;gbkey=Gene;gene=tsf;gene_biotype=protein_coding;locus_tag=IY40_RS11715;old_locus_tag=IY40_11910 NZ_JPQY01000016.1 Protein Homology CDS 94024 94875 . + 0 ID=cds-WP_025304037.1;Parent=gene-IY40_RS11715;Dbxref=GenBank:WP_025304037.1;Name=WP_025304037.1;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=tsf;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132116.1;locus_tag=IY40_RS11715;product=translation elongation factor Ts;protein_id=WP_025304037.1;transl_table=11 NZ_JPQY01000016.1 RefSeq gene 95024 95749 . + . ID=gene-IY40_RS11720;Name=pyrH;gbkey=Gene;gene=pyrH;gene_biotype=protein_coding;locus_tag=IY40_RS11720;old_locus_tag=IY40_11915 NZ_JPQY01000016.1 Protein Homology CDS 95024 95749 . + 0 ID=cds-WP_004931940.1;Parent=gene-IY40_RS11720;Dbxref=GenBank:WP_004931940.1;Name=WP_004931940.1;Ontology_term=GO:0006221,GO:0015949,GO:0033862,GO:0005737;gbkey=CDS;gene=pyrH;go_component=cytoplasm|0005737||IEA;go_function=UMP kinase activity|0033862||IEA;go_process=pyrimidine nucleotide biosynthetic process|0006221||IEA,nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212133.1;locus_tag=IY40_RS11720;product=UMP kinase;protein_id=WP_004931940.1;transl_table=11 NZ_JPQY01000016.1 RefSeq gene 95869 96426 . + . ID=gene-IY40_RS11725;Name=frr;gbkey=Gene;gene=frr;gene_biotype=protein_coding;locus_tag=IY40_RS11725;old_locus_tag=IY40_11920 NZ_JPQY01000016.1 Protein Homology CDS 95869 96426 . + 0 ID=cds-WP_004931943.1;Parent=gene-IY40_RS11725;Dbxref=GenBank:WP_004931943.1;Name=WP_004931943.1;Ontology_term=GO:0006412,GO:0008135;gbkey=CDS;gene=frr;go_function=translation factor activity%2C RNA binding|0008135||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012146492.1;locus_tag=IY40_RS11725;product=ribosome recycling factor;protein_id=WP_004931943.1;transl_table=11 NZ_JPQY01000016.1 RefSeq gene 96584 97780 . + . ID=gene-IY40_RS11730;Name=ispC;gbkey=Gene;gene=ispC;gene_biotype=protein_coding;locus_tag=IY40_RS11730;old_locus_tag=IY40_11925 NZ_JPQY01000016.1 Protein Homology CDS 96584 97780 . + 0 ID=cds-WP_043139901.1;Parent=gene-IY40_RS11730;Dbxref=GenBank:WP_043139901.1;Name=WP_043139901.1;Ontology_term=GO:0008299,GO:0005515,GO:0030604,GO:0046872,GO:0070402;gbkey=CDS;gene=ispC;go_function=protein binding|0005515||IEA,1-deoxy-D-xylulose-5-phosphate reductoisomerase activity|0030604||IEA,metal ion binding|0046872||IEA,NADPH binding|0070402||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006318682.1;locus_tag=IY40_RS11730;product=1-deoxy-D-xylulose-5-phosphate reductoisomerase;protein_id=WP_043139901.1;transl_table=11 NZ_JPQY01000016.1 RefSeq gene 98058 98816 . + . ID=gene-IY40_RS11735;Name=ispU;gbkey=Gene;gene=ispU;gene_biotype=protein_coding;gene_synonym=uppS;locus_tag=IY40_RS11735;old_locus_tag=IY40_11930 NZ_JPQY01000016.1 Protein Homology CDS 98058 98816 . + 0 ID=cds-WP_025304035.1;Parent=gene-IY40_RS11735;Dbxref=GenBank:WP_025304035.1;Name=WP_025304035.1;Ontology_term=GO:0043164,GO:0004659,GO:0008834;gbkey=CDS;gene=ispU;go_function=prenyltransferase activity|0004659||IEA,ditrans%2Cpolycis-undecaprenyl-diphosphate synthase [(2E%2C6E)-farnesyl-diphosphate specific] activity|0008834||IEA;go_process=Gram-negative-bacterium-type cell wall biogenesis|0043164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011092634.1;locus_tag=IY40_RS11735;product=(2E%2C6E)-farnesyl-diphosphate-specific ditrans%2Cpolycis-undecaprenyl-diphosphate synthase;protein_id=WP_025304035.1;transl_table=11 NZ_JPQY01000016.1 RefSeq gene 98826 99668 . + . ID=gene-IY40_RS11740;Name=cdsA;gbkey=Gene;gene=cdsA;gene_biotype=protein_coding;locus_tag=IY40_RS11740;old_locus_tag=IY40_11935 NZ_JPQY01000016.1 Protein Homology CDS 98826 99668 . + 0 ID=cds-WP_043139905.1;Parent=gene-IY40_RS11740;Dbxref=GenBank:WP_043139905.1;Name=WP_043139905.1;Ontology_term=GO:0016772;gbkey=CDS;gene=cdsA;go_function=transferase activity%2C transferring phosphorus-containing groups|0016772||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005173216.1;locus_tag=IY40_RS11740;product=phosphatidate cytidylyltransferase;protein_id=WP_043139905.1;transl_table=11 NZ_JPQY01000016.1 RefSeq gene 99696 101051 . + . ID=gene-IY40_RS11745;Name=rseP;gbkey=Gene;gene=rseP;gene_biotype=protein_coding;locus_tag=IY40_RS11745;old_locus_tag=IY40_11940 NZ_JPQY01000016.1 Protein Homology CDS 99696 101051 . + 0 ID=cds-WP_025304033.1;Parent=gene-IY40_RS11745;Dbxref=GenBank:WP_025304033.1;Name=WP_025304033.1;Ontology_term=GO:0006508,GO:0004222,GO:0005515,GO:0016020;gbkey=CDS;gene=rseP;go_component=membrane|0016020||IEA;go_function=metalloendopeptidase activity|0004222||IEA,protein binding|0005515||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212138.1;locus_tag=IY40_RS11745;product=sigma E protease regulator RseP;protein_id=WP_025304033.1;transl_table=11 NZ_JPQY01000016.1 RefSeq gene 101087 103513 . + . ID=gene-IY40_RS11750;Name=bamA;gbkey=Gene;gene=bamA;gene_biotype=protein_coding;locus_tag=IY40_RS11750;old_locus_tag=IY40_11945 NZ_JPQY01000016.1 Protein Homology CDS 101087 103513 . + 0 ID=cds-WP_033639522.1;Parent=gene-IY40_RS11750;Dbxref=GenBank:WP_033639522.1;Name=WP_033639522.1;Ontology_term=GO:0071709,GO:0009279;gbkey=CDS;gene=bamA;go_component=cell outer membrane|0009279||IEA;go_process=membrane assembly|0071709||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019078902.1;locus_tag=IY40_RS11750;product=outer membrane protein assembly factor BamA;protein_id=WP_033639522.1;transl_table=11 NZ_JPQY01000016.1 RefSeq gene 103670 104167 . + . ID=gene-IY40_RS11755;Name=skp;gbkey=Gene;gene=skp;gene_biotype=protein_coding;gene_synonym=hlpA,ompH;locus_tag=IY40_RS11755;old_locus_tag=IY40_11950 NZ_JPQY01000016.1 Protein Homology CDS 103670 104167 . + 0 ID=cds-WP_025304031.1;Parent=gene-IY40_RS11755;Dbxref=GenBank:WP_025304031.1;Name=WP_025304031.1;gbkey=CDS;gene=skp;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212140.1;locus_tag=IY40_RS11755;product=molecular chaperone Skp;protein_id=WP_025304031.1;transl_table=11 NZ_JPQY01000016.1 RefSeq gene 104171 105193 . + . ID=gene-IY40_RS11760;Name=lpxD;gbkey=Gene;gene=lpxD;gene_biotype=protein_coding;locus_tag=IY40_RS11760;old_locus_tag=IY40_11955 NZ_JPQY01000016.1 Protein Homology CDS 104171 105193 . + 0 ID=cds-WP_025304030.1;Parent=gene-IY40_RS11760;Dbxref=GenBank:WP_025304030.1;Name=WP_025304030.1;Ontology_term=GO:0009245,GO:0016410;gbkey=CDS;gene=lpxD;go_function=N-acyltransferase activity|0016410||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212141.1;locus_tag=IY40_RS11760;product=UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase;protein_id=WP_025304030.1;transl_table=11 NZ_JPQY01000016.1 RefSeq gene 105354 105809 . + . ID=gene-IY40_RS11765;Name=fabZ;gbkey=Gene;gene=fabZ;gene_biotype=protein_coding;locus_tag=IY40_RS11765;old_locus_tag=IY40_11960 NZ_JPQY01000016.1 Protein Homology CDS 105354 105809 . + 0 ID=cds-WP_004931962.1;Parent=gene-IY40_RS11765;Dbxref=GenBank:WP_004931962.1;Name=WP_004931962.1;gbkey=CDS;gene=fabZ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000210741.1;locus_tag=IY40_RS11765;product=3-hydroxyacyl-ACP dehydratase FabZ;protein_id=WP_004931962.1;transl_table=11 NZ_JPQY01000016.1 RefSeq gene 105813 106601 . + . ID=gene-IY40_RS11770;Name=lpxA;gbkey=Gene;gene=lpxA;gene_biotype=protein_coding;locus_tag=IY40_RS11770;old_locus_tag=IY40_11965 NZ_JPQY01000016.1 Protein Homology CDS 105813 106601 . + 0 ID=cds-WP_025304029.1;Parent=gene-IY40_RS11770;Dbxref=GenBank:WP_025304029.1;Name=WP_025304029.1;Ontology_term=GO:0008610,GO:0008780;gbkey=CDS;gene=lpxA;go_function=acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase activity|0008780||IEA;go_process=lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459233.1;locus_tag=IY40_RS11770;product=acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase;protein_id=WP_025304029.1;transl_table=11 NZ_JPQY01000016.1 RefSeq gene 106605 107753 . + . ID=gene-IY40_RS11775;Name=lpxB;gbkey=Gene;gene=lpxB;gene_biotype=protein_coding;locus_tag=IY40_RS11775;old_locus_tag=IY40_11970 NZ_JPQY01000016.1 Protein Homology CDS 106605 107753 . + 0 ID=cds-WP_004931967.1;Parent=gene-IY40_RS11775;Dbxref=GenBank:WP_004931967.1;Name=WP_004931967.1;Ontology_term=GO:0009245,GO:0008915;gbkey=CDS;gene=lpxB;go_function=lipid-A-disaccharide synthase activity|0008915||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017893788.1;locus_tag=IY40_RS11775;product=lipid-A-disaccharide synthase;protein_id=WP_004931967.1;transl_table=11 NZ_JPQY01000016.1 RefSeq gene 107750 108343 . + . ID=gene-IY40_RS11780;Name=rnhB;gbkey=Gene;gene=rnhB;gene_biotype=protein_coding;locus_tag=IY40_RS11780;old_locus_tag=IY40_11975 NZ_JPQY01000016.1 Protein Homology CDS 107750 108343 . + 0 ID=cds-WP_025304028.1;Parent=gene-IY40_RS11780;Dbxref=GenBank:WP_025304028.1;Name=WP_025304028.1;Ontology_term=GO:0003723,GO:0004523;gbkey=CDS;gene=rnhB;go_function=RNA binding|0003723||IEA,RNA-DNA hybrid ribonuclease activity|0004523||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012146481.1;locus_tag=IY40_RS11780;product=ribonuclease HII;protein_id=WP_025304028.1;transl_table=11 NZ_JPQY01000016.1 RefSeq gene 108422 111910 . + . ID=gene-IY40_RS11785;Name=dnaE;gbkey=Gene;gene=dnaE;gene_biotype=protein_coding;locus_tag=IY40_RS11785;old_locus_tag=IY40_11980 NZ_JPQY01000016.1 Protein Homology CDS 108422 111910 . + 0 ID=cds-WP_025304027.1;Parent=gene-IY40_RS11785;Dbxref=GenBank:WP_025304027.1;Name=WP_025304027.1;Ontology_term=GO:0006260,GO:0003676,GO:0008408;gbkey=CDS;gene=dnaE;go_function=nucleic acid binding|0003676||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225231.1;locus_tag=IY40_RS11785;product=DNA polymerase III subunit alpha;protein_id=WP_025304027.1;transl_table=11 NZ_JPQY01000016.1 RefSeq gene 111923 112882 . + . ID=gene-IY40_RS11790;Name=accA;gbkey=Gene;gene=accA;gene_biotype=protein_coding;locus_tag=IY40_RS11790;old_locus_tag=IY40_11985 NZ_JPQY01000016.1 Protein Homology CDS 111923 112882 . + 0 ID=cds-WP_019455765.1;Parent=gene-IY40_RS11790;Dbxref=GenBank:WP_019455765.1;Name=WP_019455765.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;gene=accA;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019455765.1;locus_tag=IY40_RS11790;product=acetyl-CoA carboxylase carboxyl transferase subunit alpha;protein_id=WP_019455765.1;transl_table=11 NZ_JPQY01000016.1 RefSeq gene 112994 115135 . + . ID=gene-IY40_RS11795;Name=IY40_RS11795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS11795;old_locus_tag=IY40_11990 NZ_JPQY01000016.1 Protein Homology CDS 112994 115135 . + 0 ID=cds-WP_025304026.1;Parent=gene-IY40_RS11795;Dbxref=GenBank:WP_025304026.1;Name=WP_025304026.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004959264.1;locus_tag=IY40_RS11795;product=lysine decarboxylase LdcC;protein_id=WP_025304026.1;transl_table=11 NZ_JPQY01000016.1 RefSeq gene 115140 115685 . - . ID=gene-IY40_RS11800;Name=IY40_RS11800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS11800;old_locus_tag=IY40_11995 NZ_JPQY01000016.1 Protein Homology CDS 115140 115685 . - 0 ID=cds-WP_043139912.1;Parent=gene-IY40_RS11800;Dbxref=GenBank:WP_043139912.1;Name=WP_043139912.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017893786.1;locus_tag=IY40_RS11800;product=MarR family winged helix-turn-helix transcriptional regulator;protein_id=WP_043139912.1;transl_table=11 NZ_JPQY01000016.1 RefSeq gene 115833 116066 . + . ID=gene-IY40_RS11805;Name=IY40_RS11805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS11805;old_locus_tag=IY40_12000 NZ_JPQY01000016.1 Protein Homology CDS 115833 116066 . + 0 ID=cds-WP_025304024.1;Parent=gene-IY40_RS11805;Dbxref=GenBank:WP_025304024.1;Name=WP_025304024.1;Ontology_term=GO:0015035;gbkey=CDS;go_function=protein-disulfide reductase activity|0015035||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012146476.1;locus_tag=IY40_RS11805;product=glutaredoxin domain-containing protein;protein_id=WP_025304024.1;transl_table=11 NZ_JPQY01000016.1 RefSeq gene 116177 116566 . + . ID=gene-IY40_RS11810;Name=IY40_RS11810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS11810;old_locus_tag=IY40_12005 NZ_JPQY01000016.1 Protein Homology CDS 116177 116566 . + 0 ID=cds-WP_025304023.1;Parent=gene-IY40_RS11810;Dbxref=GenBank:WP_025304023.1;Name=WP_025304023.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019455767.1;locus_tag=IY40_RS11810;product=VOC family protein;protein_id=WP_025304023.1;transl_table=11 NZ_JPQY01000016.1 RefSeq gene 116656 118212 . + . ID=gene-IY40_RS11815;Name=cadC;gbkey=Gene;gene=cadC;gene_biotype=protein_coding;locus_tag=IY40_RS11815;old_locus_tag=IY40_12010 NZ_JPQY01000016.1 Protein Homology CDS 116656 118212 . + 0 ID=cds-WP_043139916.1;Parent=gene-IY40_RS11815;Dbxref=GenBank:WP_043139916.1;Name=WP_043139916.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=cadC;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004931978.1;locus_tag=IY40_RS11815;product=lysine decarboxylation/transport transcriptional activator CadC;protein_id=WP_043139916.1;transl_table=11 NZ_JPQY01000016.1 RefSeq gene 118582 119925 . + . ID=gene-IY40_RS11820;Name=cadB;gbkey=Gene;gene=cadB;gene_biotype=protein_coding;locus_tag=IY40_RS11820;old_locus_tag=IY40_12015 NZ_JPQY01000016.1 Protein Homology CDS 118582 119925 . + 0 ID=cds-WP_025304021.1;Parent=gene-IY40_RS11820;Dbxref=GenBank:WP_025304021.1;Name=WP_025304021.1;Ontology_term=GO:0043872;gbkey=CDS;gene=cadB;go_function=lysine:cadaverine antiporter activity|0043872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225608.1;locus_tag=IY40_RS11820;product=cadaverine/lysine antiporter;protein_id=WP_025304021.1;transl_table=11 NZ_JPQY01000016.1 RefSeq gene 120021 122159 . + . ID=gene-IY40_RS11825;Name=cadA;gbkey=Gene;gene=cadA;gene_biotype=protein_coding;locus_tag=IY40_RS11825;old_locus_tag=IY40_12020 NZ_JPQY01000016.1 Protein Homology CDS 120021 122159 . + 0 ID=cds-WP_043139919.1;Parent=gene-IY40_RS11825;Dbxref=GenBank:WP_043139919.1;Name=WP_043139919.1;gbkey=CDS;gene=cadA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019455770.1;locus_tag=IY40_RS11825;product=lysine decarboxylase CadA;protein_id=WP_043139919.1;transl_table=11 NZ_JPQY01000016.1 RefSeq gene 122228 123673 . + . ID=gene-IY40_RS11830;Name=dtpD;gbkey=Gene;gene=dtpD;gene_biotype=protein_coding;locus_tag=IY40_RS11830;old_locus_tag=IY40_12025 NZ_JPQY01000016.1 Protein Homology CDS 122228 123673 . + 0 ID=cds-WP_043139924.1;Parent=gene-IY40_RS11830;Dbxref=GenBank:WP_043139924.1;Name=WP_043139924.1;Ontology_term=GO:0006857,GO:0055085,GO:1904680,GO:0016020;gbkey=CDS;gene=dtpD;go_component=membrane|0016020||IEA;go_function=peptide transmembrane transporter activity|1904680||IEA;go_process=oligopeptide transport|0006857||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004931984.1;locus_tag=IY40_RS11830;product=dipeptide permease DtpD;protein_id=WP_043139924.1;transl_table=11 NZ_JPQY01000016.1 RefSeq gene 123730 125061 . + . ID=gene-IY40_RS11835;Name=tilS;gbkey=Gene;gene=tilS;gene_biotype=protein_coding;locus_tag=IY40_RS11835;old_locus_tag=IY40_12030 NZ_JPQY01000016.1 Protein Homology CDS 123730 125061 . + 0 ID=cds-WP_043139928.1;Parent=gene-IY40_RS11835;Dbxref=GenBank:WP_043139928.1;Name=WP_043139928.1;Ontology_term=GO:0008033,GO:0000166,GO:0005524,GO:0016879;gbkey=CDS;gene=tilS;go_function=nucleotide binding|0000166||IEA,ATP binding|0005524||IEA,ligase activity%2C forming carbon-nitrogen bonds|0016879||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019455772.1;locus_tag=IY40_RS11835;product=tRNA lysidine(34) synthetase TilS;protein_id=WP_043139928.1;transl_table=11 NZ_JPQY01000016.1 RefSeq gene 125061 125375 . + . ID=gene-IY40_RS11840;Name=IY40_RS11840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS11840;old_locus_tag=IY40_12035 NZ_JPQY01000016.1 Protein Homology CDS 125061 125375 . + 0 ID=cds-WP_043139932.1;Parent=gene-IY40_RS11840;Dbxref=GenBank:WP_043139932.1;Name=WP_043139932.1;Ontology_term=GO:0009055,GO:0020037,GO:0046872;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006327519.1;locus_tag=IY40_RS11840;product=c-type cytochrome;protein_id=WP_043139932.1;transl_table=11 NZ_JPQY01000016.1 RefSeq gene 125426 125689 . - . ID=gene-IY40_RS11845;Name=rof;gbkey=Gene;gene=rof;gene_biotype=protein_coding;locus_tag=IY40_RS11845;old_locus_tag=IY40_12040 NZ_JPQY01000016.1 Protein Homology CDS 125426 125689 . - 0 ID=cds-WP_004931991.1;Parent=gene-IY40_RS11845;Dbxref=GenBank:WP_004931991.1;Name=WP_004931991.1;gbkey=CDS;gene=rof;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015673540.1;locus_tag=IY40_RS11845;product=Rho-binding antiterminator;protein_id=WP_004931991.1;transl_table=11 NZ_JPQY01000016.1 RefSeq gene 125676 125876 . - . ID=gene-IY40_RS11850;Name=IY40_RS11850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS11850;old_locus_tag=IY40_12045 NZ_JPQY01000016.1 Protein Homology CDS 125676 125876 . - 0 ID=cds-WP_004931993.1;Parent=gene-IY40_RS11850;Dbxref=GenBank:WP_004931993.1;Name=WP_004931993.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012146467.1;locus_tag=IY40_RS11850;product=YaeP family protein;protein_id=WP_004931993.1;transl_table=11 NZ_JPQY01000016.1 RefSeq gene 126090 126638 . + . ID=gene-IY40_RS11855;Name=IY40_RS11855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS11855;old_locus_tag=IY40_12050 NZ_JPQY01000016.1 Protein Homology CDS 126090 126638 . + 0 ID=cds-WP_025304016.1;Parent=gene-IY40_RS11855;Dbxref=GenBank:WP_025304016.1;Name=WP_025304016.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012146466.1;locus_tag=IY40_RS11855;product=YaeQ family protein;protein_id=WP_025304016.1;transl_table=11 NZ_JPQY01000016.1 RefSeq gene 126642 127055 . + . ID=gene-IY40_RS11860;Name=arfB;gbkey=Gene;gene=arfB;gene_biotype=protein_coding;locus_tag=IY40_RS11860;old_locus_tag=IY40_12055 NZ_JPQY01000016.1 Protein Homology CDS 126642 127055 . + 0 ID=cds-WP_004931997.1;Parent=gene-IY40_RS11860;Dbxref=GenBank:WP_004931997.1;Name=WP_004931997.1;Ontology_term=GO:0006415,GO:0003747;gbkey=CDS;gene=arfB;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006318651.1;locus_tag=IY40_RS11860;product=alternative ribosome rescue aminoacyl-tRNA hydrolase ArfB;protein_id=WP_004931997.1;transl_table=11 NZ_JPQY01000016.1 RefSeq gene 127085 127768 . + . ID=gene-IY40_RS11865;Name=nlpE;gbkey=Gene;gene=nlpE;gene_biotype=protein_coding;gene_synonym=cutF;locus_tag=IY40_RS11865;old_locus_tag=IY40_12060 NZ_JPQY01000016.1 Protein Homology CDS 127085 127768 . + 0 ID=cds-WP_043139936.1;Parent=gene-IY40_RS11865;Dbxref=GenBank:WP_043139936.1;Name=WP_043139936.1;Note=NlpE%2C an outer membrane lipoprotein%2C interacts directly with CpxA%2C the sensor histidine kinase of the Cpx system for response to envelope stress.;gbkey=CDS;gene=nlpE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006318642.1;locus_tag=IY40_RS11865;product=envelope stress response activation lipoprotein NlpE;protein_id=WP_043139936.1;transl_table=11 NZ_JPQY01000016.1 RefSeq gene 127829 129547 . - . ID=gene-IY40_RS11870;Name=proS;gbkey=Gene;gene=proS;gene_biotype=protein_coding;locus_tag=IY40_RS11870;old_locus_tag=IY40_12065 NZ_JPQY01000016.1 Protein Homology CDS 127829 129547 . - 0 ID=cds-WP_025304013.1;Parent=gene-IY40_RS11870;Dbxref=GenBank:WP_025304013.1;Name=WP_025304013.1;Ontology_term=GO:0006433,GO:0004827,GO:0005524,GO:0005737;gbkey=CDS;gene=proS;go_component=cytoplasm|0005737||IEA;go_function=proline-tRNA ligase activity|0004827||IEA,ATP binding|0005524||IEA;go_process=prolyl-tRNA aminoacylation|0006433||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005163997.1;locus_tag=IY40_RS11870;product=proline--tRNA ligase;protein_id=WP_025304013.1;transl_table=11 NZ_JPQY01000016.1 RefSeq gene 129660 130367 . - . ID=gene-IY40_RS11875;Name=tsaA;gbkey=Gene;gene=tsaA;gene_biotype=protein_coding;locus_tag=IY40_RS11875;old_locus_tag=IY40_12070 NZ_JPQY01000016.1 Protein Homology CDS 129660 130367 . - 0 ID=cds-WP_033644898.1;Parent=gene-IY40_RS11875;Dbxref=GenBank:WP_033644898.1;Name=WP_033644898.1;Ontology_term=GO:0006400,GO:0008757,GO:0005737;gbkey=CDS;gene=tsaA;go_component=cytoplasm|0005737||IEA;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212157.1;locus_tag=IY40_RS11875;product=tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO;protein_id=WP_033644898.1;transl_table=11 NZ_JPQY01000016.1 RefSeq gene 130364 130768 . - . ID=gene-IY40_RS11880;Name=rcsF;gbkey=Gene;gene=rcsF;gene_biotype=protein_coding;locus_tag=IY40_RS11880;old_locus_tag=IY40_12075 NZ_JPQY01000016.1 Protein Homology CDS 130364 130768 . - 0 ID=cds-WP_043139941.1;Parent=gene-IY40_RS11880;Dbxref=GenBank:WP_043139941.1;Name=WP_043139941.1;gbkey=CDS;gene=rcsF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015378881.1;locus_tag=IY40_RS11880;product=Rcs stress response system protein RcsF;protein_id=WP_043139941.1;transl_table=11 NZ_JPQY01000016.1 RefSeq gene 130883 131698 . - . ID=gene-IY40_RS11885;Name=IY40_RS11885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS11885;old_locus_tag=IY40_12080 NZ_JPQY01000016.1 Protein Homology CDS 130883 131698 . - 0 ID=cds-WP_043139945.1;Parent=gene-IY40_RS11885;Dbxref=GenBank:WP_043139945.1;Name=WP_043139945.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019455780.1;locus_tag=IY40_RS11885;product=MetQ/NlpA family lipoprotein;protein_id=WP_043139945.1;transl_table=11 NZ_JPQY01000016.1 RefSeq gene 131738 132391 . - . ID=gene-IY40_RS11890;Name=IY40_RS11890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS11890;old_locus_tag=IY40_12085 NZ_JPQY01000016.1 Protein Homology CDS 131738 132391 . - 0 ID=cds-WP_004932010.1;Parent=gene-IY40_RS11890;Dbxref=GenBank:WP_004932010.1;Name=WP_004932010.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132073.1;locus_tag=IY40_RS11890;product=methionine ABC transporter permease MetI;protein_id=WP_004932010.1;transl_table=11 NZ_JPQY01000016.1 RefSeq gene 132384 133415 . - . ID=gene-IY40_RS11895;Name=metN;gbkey=Gene;gene=metN;gene_biotype=protein_coding;locus_tag=IY40_RS11895;old_locus_tag=IY40_12090 NZ_JPQY01000016.1 Protein Homology CDS 132384 133415 . - 0 ID=cds-WP_043139948.1;Parent=gene-IY40_RS11895;Dbxref=GenBank:WP_043139948.1;Name=WP_043139948.1;Ontology_term=GO:0048473,GO:0005524,GO:0033232,GO:0009276;gbkey=CDS;gene=metN;go_component=Gram-negative-bacterium-type cell wall|0009276||IEA;go_function=ATP binding|0005524||IEA,ABC-type D-methionine transporter activity|0033232||IEA;go_process=D-methionine transmembrane transport|0048473||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225246.1;locus_tag=IY40_RS11895;product=methionine ABC transporter ATP-binding protein MetN;protein_id=WP_043139948.1;transl_table=11 NZ_JPQY01000016.1 RefSeq gene 133604 134167 . + . ID=gene-IY40_RS11900;Name=gmhB;gbkey=Gene;gene=gmhB;gene_biotype=protein_coding;locus_tag=IY40_RS11900;old_locus_tag=IY40_12095 NZ_JPQY01000016.1 Protein Homology CDS 133604 134167 . + 0 ID=cds-WP_043139951.1;Parent=gene-IY40_RS11900;Dbxref=GenBank:WP_043139951.1;Name=WP_043139951.1;Ontology_term=GO:0005975,GO:0016791;gbkey=CDS;gene=gmhB;go_function=phosphatase activity|0016791||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015378880.1;locus_tag=IY40_RS11900;product=D-glycero-beta-D-manno-heptose 1%2C7-bisphosphate 7-phosphatase;protein_id=WP_043139951.1;transl_table=11 NZ_JPQY01000016.1 RefSeq gene 134561 134670 . + . ID=gene-IY40_RS11905;Name=IY40_RS11905;end_range=134670,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=IY40_RS11905;old_locus_tag=IY40_12100;partial=true NZ_JPQY01000016.1 cmsearch rRNA 134561 134670 . + . ID=rna-IY40_RS11905;Parent=gene-IY40_RS11905;Dbxref=RFAM:RF00177;end_range=134670,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=IY40_RS11905;partial=true;product=16S ribosomal RNA NZ_JPQY01000016.1 cmsearch exon 134561 134670 . + . ID=exon-IY40_RS11905-1;Parent=rna-IY40_RS11905;Dbxref=RFAM:RF00177;end_range=134670,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=IY40_RS11905;partial=true;product=16S ribosomal RNA ##sequence-region NZ_JPQY01000017.1 1 39269 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=615 NZ_JPQY01000017.1 RefSeq region 1 39269 . + . ID=NZ_JPQY01000017.1:1..39269;Dbxref=taxon:615;collected-by=Mahloro H. Serepa%3B Vincent M. Gray;collection-date=2013-04-11;country=South Africa: North West Province;gbkey=Src;genome=genomic;identified-by=Mahloro H. Serepa%3B Vincent M. Gray;isolation-source=entomopathogenic nematode Oscheius sp. MCB living in soil;mol_type=genomic DNA;nat-host=Oscheius sp. MCB;strain=MCB NZ_JPQY01000017.1 RefSeq pseudogene 518 1358 . - . ID=gene-IY40_RS24825;Name=IY40_RS24825;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IY40_RS24825;pseudo=true NZ_JPQY01000017.1 Protein Homology CDS 518 1358 . - 0 ID=cds-IY40_RS24825;Parent=gene-IY40_RS24825;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010308629.1;locus_tag=IY40_RS24825;product=integrase domain-containing protein;pseudo=true;transl_table=11 NZ_JPQY01000017.1 RefSeq pseudogene 1358 1887 . - . ID=gene-IY40_RS25965;Name=IY40_RS25965;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IY40_RS25965;old_locus_tag=IY40_12125;partial=true;pseudo=true;start_range=.,1358 NZ_JPQY01000017.1 Protein Homology CDS 1358 1887 . - 0 ID=cds-IY40_RS25965;Parent=gene-IY40_RS25965;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001219032.1;locus_tag=IY40_RS25965;partial=true;product=tyrosine-type recombinase/integrase;pseudo=true;start_range=.,1358;transl_table=11 NZ_JPQY01000017.1 RefSeq gene 2051 2126 . - . ID=gene-IY40_RS11930;Name=IY40_RS11930;gbkey=Gene;gene_biotype=tRNA;locus_tag=IY40_RS11930;old_locus_tag=IY40_12130 NZ_JPQY01000017.1 tRNAscan-SE tRNA 2051 2126 . - . ID=rna-IY40_RS11930;Parent=gene-IY40_RS11930;anticodon=(pos:complement(2091..2093));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=IY40_RS11930;product=tRNA-Asn NZ_JPQY01000017.1 tRNAscan-SE exon 2051 2126 . - . ID=exon-IY40_RS11930-1;Parent=rna-IY40_RS11930;anticodon=(pos:complement(2091..2093));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=IY40_RS11930;product=tRNA-Asn NZ_JPQY01000017.1 RefSeq gene 2465 3388 . + . ID=gene-IY40_RS11935;Name=nac;gbkey=Gene;gene=nac;gene_biotype=protein_coding;locus_tag=IY40_RS11935;old_locus_tag=IY40_12140 NZ_JPQY01000017.1 Protein Homology CDS 2465 3388 . + 0 ID=cds-WP_043139985.1;Parent=gene-IY40_RS11935;Dbxref=GenBank:WP_043139985.1;Name=WP_043139985.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=nac;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004935471.1;locus_tag=IY40_RS11935;product=nitrogen assimilation transcriptional regulator NAC;protein_id=WP_043139985.1;transl_table=11 NZ_JPQY01000017.1 RefSeq gene 3425 4888 . - . ID=gene-IY40_RS11940;Name=IY40_RS11940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS11940;old_locus_tag=IY40_12145 NZ_JPQY01000017.1 Protein Homology CDS 3425 4888 . - 0 ID=cds-WP_043139988.1;Parent=gene-IY40_RS11940;Dbxref=GenBank:WP_043139988.1;Name=WP_043139988.1;Ontology_term=GO:0009116,GO:0044209,GO:0008714;gbkey=CDS;go_function=AMP nucleosidase activity|0008714||IEA;go_process=nucleoside metabolic process|0009116||IEA,AMP salvage|0044209||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019452498.1;locus_tag=IY40_RS11940;product=AMP nucleosidase;protein_id=WP_043139988.1;transl_table=11 NZ_JPQY01000017.1 RefSeq gene 5026 7329 . - . ID=gene-IY40_RS11945;Name=opgB;gbkey=Gene;gene=opgB;gene_biotype=protein_coding;locus_tag=IY40_RS11945;old_locus_tag=IY40_12150 NZ_JPQY01000017.1 Protein Homology CDS 5026 7329 . - 0 ID=cds-WP_043139991.1;Parent=gene-IY40_RS11945;Dbxref=GenBank:WP_043139991.1;Name=WP_043139991.1;Ontology_term=GO:0008484;gbkey=CDS;gene=opgB;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013813639.1;locus_tag=IY40_RS11945;product=phosphatidylglycerol--membrane-oligosaccharide glycerophosphotransferase;protein_id=WP_043139991.1;transl_table=11 NZ_JPQY01000017.1 RefSeq gene 7615 8355 . + . ID=gene-IY40_RS11950;Name=IY40_RS11950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS11950;old_locus_tag=IY40_12155 NZ_JPQY01000017.1 Protein Homology CDS 7615 8355 . + 0 ID=cds-WP_043139994.1;Parent=gene-IY40_RS11950;Dbxref=GenBank:WP_043139994.1;Name=WP_043139994.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019452500.1;locus_tag=IY40_RS11950;product=transporter substrate-binding domain-containing protein;protein_id=WP_043139994.1;transl_table=11 NZ_JPQY01000017.1 RefSeq gene 8356 9291 . - . ID=gene-IY40_RS11955;Name=IY40_RS11955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS11955;old_locus_tag=IY40_12160 NZ_JPQY01000017.1 Protein Homology CDS 8356 9291 . - 0 ID=cds-WP_043139999.1;Parent=gene-IY40_RS11955;Dbxref=GenBank:WP_043139999.1;Name=WP_043139999.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016927122.1;locus_tag=IY40_RS11955;product=ABC transporter substrate-binding protein;protein_id=WP_043139999.1;transl_table=11 NZ_JPQY01000017.1 RefSeq gene 9327 10094 . - . ID=gene-IY40_RS11960;Name=IY40_RS11960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS11960;old_locus_tag=IY40_12165 NZ_JPQY01000017.1 Protein Homology CDS 9327 10094 . - 0 ID=cds-WP_043140003.1;Parent=gene-IY40_RS11960;Dbxref=GenBank:WP_043140003.1;Name=WP_043140003.1;Ontology_term=GO:0005524,GO:0022857;gbkey=CDS;go_function=ATP binding|0005524||IEA,transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016927123.1;locus_tag=IY40_RS11960;product=ABC transporter permease;protein_id=WP_043140003.1;transl_table=11 NZ_JPQY01000017.1 RefSeq gene 10091 10831 . - . ID=gene-IY40_RS11965;Name=IY40_RS11965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS11965;old_locus_tag=IY40_12170 NZ_JPQY01000017.1 Protein Homology CDS 10091 10831 . - 0 ID=cds-WP_025303401.1;Parent=gene-IY40_RS11965;Dbxref=GenBank:WP_025303401.1;Name=WP_025303401.1;Ontology_term=GO:0006810,GO:0005215,GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=transporter activity|0005215||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004935453.1;locus_tag=IY40_RS11965;product=ABC transporter ATP-binding protein;protein_id=WP_025303401.1;transl_table=11 NZ_JPQY01000017.1 RefSeq gene 10828 11511 . - . ID=gene-IY40_RS11970;Name=IY40_RS11970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS11970;old_locus_tag=IY40_12175 NZ_JPQY01000017.1 Protein Homology CDS 10828 11511 . - 0 ID=cds-WP_043140011.1;Parent=gene-IY40_RS11970;Dbxref=GenBank:WP_043140011.1;Name=WP_043140011.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019452504.1;locus_tag=IY40_RS11970;product=TenA family protein;protein_id=WP_043140011.1;transl_table=11 NZ_JPQY01000017.1 cmsearch riboswitch 11574 11676 . - . ID=id-NZ_JPQY01000017.1:11574..11676;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_JPQY01000017.1 RefSeq gene 11826 12848 . + . ID=gene-IY40_RS11975;Name=IY40_RS11975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS11975;old_locus_tag=IY40_12180 NZ_JPQY01000017.1 Protein Homology CDS 11826 12848 . + 0 ID=cds-WP_025303399.1;Parent=gene-IY40_RS11975;Dbxref=GenBank:WP_025303399.1;Name=WP_025303399.1;Ontology_term=GO:0010181,GO:0016491;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004946504.1;locus_tag=IY40_RS11975;product=LLM class flavin-dependent oxidoreductase;protein_id=WP_025303399.1;transl_table=11 NZ_JPQY01000017.1 RefSeq gene 12862 13596 . + . ID=gene-IY40_RS11980;Name=IY40_RS11980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS11980;old_locus_tag=IY40_12185 NZ_JPQY01000017.1 Protein Homology CDS 12862 13596 . + 0 ID=cds-WP_043140014.1;Parent=gene-IY40_RS11980;Dbxref=GenBank:WP_043140014.1;Name=WP_043140014.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019452506.1;locus_tag=IY40_RS11980;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_043140014.1;transl_table=11 NZ_JPQY01000017.1 RefSeq gene 13723 14697 . + . ID=gene-IY40_RS11985;Name=IY40_RS11985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS11985;old_locus_tag=IY40_12190 NZ_JPQY01000017.1 Protein Homology CDS 13723 14697 . + 0 ID=cds-WP_043140017.1;Parent=gene-IY40_RS11985;Dbxref=GenBank:WP_043140017.1;Name=WP_043140017.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012145840.1;locus_tag=IY40_RS11985;product=GlxA family transcriptional regulator;protein_id=WP_043140017.1;transl_table=11 NZ_JPQY01000017.1 RefSeq gene 14775 15785 . + . ID=gene-IY40_RS11990;Name=gap;gbkey=Gene;gene=gap;gene_biotype=protein_coding;locus_tag=IY40_RS11990;old_locus_tag=IY40_12195 NZ_JPQY01000017.1 Protein Homology CDS 14775 15785 . + 0 ID=cds-WP_025303396.1;Parent=gene-IY40_RS11990;Dbxref=GenBank:WP_025303396.1;Name=WP_025303396.1;Ontology_term=GO:0006006,GO:0016620,GO:0050661,GO:0051287;gbkey=CDS;gene=gap;go_function=oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA,NADP binding|0050661||IEA,NAD binding|0051287||IEA;go_process=glucose metabolic process|0006006||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015697353.1;locus_tag=IY40_RS11990;product=type I glyceraldehyde-3-phosphate dehydrogenase;protein_id=WP_025303396.1;transl_table=11 NZ_JPQY01000017.1 RefSeq gene 15840 15915 . - . ID=gene-IY40_RS11995;Name=IY40_RS11995;gbkey=Gene;gene_biotype=tRNA;locus_tag=IY40_RS11995;old_locus_tag=IY40_12200 NZ_JPQY01000017.1 tRNAscan-SE tRNA 15840 15915 . - . ID=rna-IY40_RS11995;Parent=gene-IY40_RS11995;anticodon=(pos:complement(15880..15882));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=IY40_RS11995;product=tRNA-Asn NZ_JPQY01000017.1 tRNAscan-SE exon 15840 15915 . - . ID=exon-IY40_RS11995-1;Parent=rna-IY40_RS11995;anticodon=(pos:complement(15880..15882));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=IY40_RS11995;product=tRNA-Asn NZ_JPQY01000017.1 RefSeq gene 16015 16815 . - . ID=gene-IY40_RS12000;Name=mtfA;gbkey=Gene;gene=mtfA;gene_biotype=protein_coding;locus_tag=IY40_RS12000;old_locus_tag=IY40_12205 NZ_JPQY01000017.1 Protein Homology CDS 16015 16815 . - 0 ID=cds-WP_025303395.1;Parent=gene-IY40_RS12000;Dbxref=GenBank:WP_025303395.1;Name=WP_025303395.1;Ontology_term=GO:0008237;gbkey=CDS;gene=mtfA;go_function=metallopeptidase activity|0008237||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016927130.1;locus_tag=IY40_RS12000;product=DgsA anti-repressor MtfA;protein_id=WP_025303395.1;transl_table=11 NZ_JPQY01000017.1 RefSeq gene 16908 16997 . + . ID=gene-IY40_RS12005;Name=IY40_RS12005;gbkey=Gene;gene_biotype=tRNA;locus_tag=IY40_RS12005;old_locus_tag=IY40_12210 NZ_JPQY01000017.1 tRNAscan-SE tRNA 16908 16997 . + . ID=rna-IY40_RS12005;Parent=gene-IY40_RS12005;anticodon=(pos:16942..16944);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=IY40_RS12005;product=tRNA-Ser NZ_JPQY01000017.1 tRNAscan-SE exon 16908 16997 . + . ID=exon-IY40_RS12005-1;Parent=rna-IY40_RS12005;anticodon=(pos:16942..16944);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=IY40_RS12005;product=tRNA-Ser NZ_JPQY01000017.1 RefSeq gene 17468 18955 . + . ID=gene-IY40_RS12010;Name=IY40_RS12010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS12010;old_locus_tag=IY40_12215 NZ_JPQY01000017.1 Protein Homology CDS 17468 18955 . + 0 ID=cds-WP_043140020.1;Parent=gene-IY40_RS12010;Dbxref=GenBank:WP_043140020.1;Name=WP_043140020.1;Ontology_term=GO:0010181,GO:0016831,GO:0046872;gbkey=CDS;go_function=FMN binding|0010181||IEA,carboxy-lyase activity|0016831||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004935397.1;locus_tag=IY40_RS12010;product=UbiD family decarboxylase;protein_id=WP_043140020.1;transl_table=11 NZ_JPQY01000017.1 RefSeq gene 18945 19415 . + . ID=gene-IY40_RS12015;Name=IY40_RS12015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS12015;old_locus_tag=IY40_12220 NZ_JPQY01000017.1 Protein Homology CDS 18945 19415 . + 0 ID=cds-WP_025303393.1;Parent=gene-IY40_RS12015;Dbxref=GenBank:WP_025303393.1;Name=WP_025303393.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004935393.1;locus_tag=IY40_RS12015;product=MarR family winged helix-turn-helix transcriptional regulator;protein_id=WP_025303393.1;transl_table=11 NZ_JPQY01000017.1 RefSeq gene 19571 20203 . + . ID=gene-IY40_RS12020;Name=IY40_RS12020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS12020;old_locus_tag=IY40_12225 NZ_JPQY01000017.1 Protein Homology CDS 19571 20203 . + 0 ID=cds-WP_025303392.1;Parent=gene-IY40_RS12020;Dbxref=GenBank:WP_025303392.1;Name=WP_025303392.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016927167.1;locus_tag=IY40_RS12020;product=ECs1377 family protein;protein_id=WP_025303392.1;transl_table=11 NZ_JPQY01000017.1 RefSeq gene 20261 20695 . - . ID=gene-IY40_RS12025;Name=IY40_RS12025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS12025;old_locus_tag=IY40_12230 NZ_JPQY01000017.1 Protein Homology CDS 20261 20695 . - 0 ID=cds-WP_025303391.1;Parent=gene-IY40_RS12025;Dbxref=GenBank:WP_025303391.1;Name=WP_025303391.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004389672.1;locus_tag=IY40_RS12025;product=DoxX family protein;protein_id=WP_025303391.1;transl_table=11 NZ_JPQY01000017.1 RefSeq gene 20913 21113 . + . ID=gene-IY40_RS12030;Name=IY40_RS12030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS12030;old_locus_tag=IY40_12235 NZ_JPQY01000017.1 Protein Homology CDS 20913 21113 . + 0 ID=cds-WP_016927170.1;Parent=gene-IY40_RS12030;Dbxref=GenBank:WP_016927170.1;Name=WP_016927170.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004935269.1;locus_tag=IY40_RS12030;product=hypothetical protein;protein_id=WP_016927170.1;transl_table=11 NZ_JPQY01000017.1 RefSeq gene 21190 21588 . + . ID=gene-IY40_RS12035;Name=gspS;gbkey=Gene;gene=gspS;gene_biotype=protein_coding;locus_tag=IY40_RS12035;old_locus_tag=IY40_12240 NZ_JPQY01000017.1 Protein Homology CDS 21190 21588 . + 0 ID=cds-WP_025303389.1;Parent=gene-IY40_RS12035;Dbxref=GenBank:WP_025303389.1;Name=WP_025303389.1;Ontology_term=GO:0006886;gbkey=CDS;gene=gspS;go_process=intracellular protein transport|0006886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019453453.1;locus_tag=IY40_RS12035;product=type II secretion system pilot lipoprotein GspS;protein_id=WP_025303389.1;transl_table=11 NZ_JPQY01000017.1 RefSeq gene 21702 23135 . + . ID=gene-IY40_RS12040;Name=IY40_RS12040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS12040;old_locus_tag=IY40_12245 NZ_JPQY01000017.1 Protein Homology CDS 21702 23135 . + 0 ID=cds-WP_025303388.1;Parent=gene-IY40_RS12040;Dbxref=GenBank:WP_025303388.1;Name=WP_025303388.1;Ontology_term=GO:0055085,GO:0015297;gbkey=CDS;go_function=antiporter activity|0015297||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004935263.1;locus_tag=IY40_RS12040;product=EmmdR/YeeO family multidrug/toxin efflux MATE transporter;protein_id=WP_025303388.1;transl_table=11 NZ_JPQY01000017.1 RefSeq gene 23166 23345 . - . ID=gene-IY40_RS12045;Name=IY40_RS12045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS12045;old_locus_tag=IY40_12250 NZ_JPQY01000017.1 Protein Homology CDS 23166 23345 . - 0 ID=cds-WP_019453466.1;Parent=gene-IY40_RS12045;Dbxref=GenBank:WP_019453466.1;Name=WP_019453466.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015378373.1;locus_tag=IY40_RS12045;product=hypothetical protein;protein_id=WP_019453466.1;transl_table=11 NZ_JPQY01000017.1 RefSeq gene 23755 26127 . - . ID=gene-IY40_RS12055;Name=IY40_RS12055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS12055;old_locus_tag=IY40_12260 NZ_JPQY01000017.1 Protein Homology CDS 23755 26127 . - 0 ID=cds-WP_025303386.1;Parent=gene-IY40_RS12055;Dbxref=GenBank:WP_025303386.1;Name=WP_025303386.1;Ontology_term=GO:0016614,GO:0048038,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=oxidoreductase activity%2C acting on CH-OH group of donors|0016614||IEA,quinone binding|0048038||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004946400.1;locus_tag=IY40_RS12055;product=glucose/quinate/shikimate family membrane-bound PQQ-dependent dehydrogenase;protein_id=WP_025303386.1;transl_table=11 NZ_JPQY01000017.1 RefSeq gene 26275 28413 . - . ID=gene-IY40_RS12060;Name=pqqU;gbkey=Gene;gene=pqqU;gene_biotype=protein_coding;locus_tag=IY40_RS12060;old_locus_tag=IY40_12265 NZ_JPQY01000017.1 Protein Homology CDS 26275 28413 . - 0 ID=cds-WP_025303385.1;Parent=gene-IY40_RS12060;Dbxref=GenBank:WP_025303385.1;Name=WP_025303385.1;gbkey=CDS;gene=pqqU;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015378371.1;locus_tag=IY40_RS12060;product=TonB-dependent receptor PqqU;protein_id=WP_025303385.1;transl_table=11 NZ_JPQY01000017.1 RefSeq gene 28719 29708 . + . ID=gene-IY40_RS12065;Name=IY40_RS12065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS12065;old_locus_tag=IY40_12270 NZ_JPQY01000017.1 Protein Homology CDS 28719 29708 . + 0 ID=cds-WP_043140026.1;Parent=gene-IY40_RS12065;Dbxref=GenBank:WP_043140026.1;Name=WP_043140026.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004935250.1;locus_tag=IY40_RS12065;product=aldo/keto reductase;protein_id=WP_043140026.1;transl_table=11 NZ_JPQY01000017.1 RefSeq gene 29705 30598 . - . ID=gene-IY40_RS12070;Name=IY40_RS12070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS12070;old_locus_tag=IY40_12275 NZ_JPQY01000017.1 Protein Homology CDS 29705 30598 . - 0 ID=cds-WP_043140030.1;Parent=gene-IY40_RS12070;Dbxref=GenBank:WP_043140030.1;Name=WP_043140030.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015378369.1;locus_tag=IY40_RS12070;product=LysR family transcriptional regulator;protein_id=WP_043140030.1;transl_table=11 NZ_JPQY01000017.1 RefSeq gene 30771 31166 . + . ID=gene-IY40_RS12075;Name=IY40_RS12075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS12075;old_locus_tag=IY40_12280 NZ_JPQY01000017.1 Protein Homology CDS 30771 31166 . + 0 ID=cds-WP_025303382.1;Parent=gene-IY40_RS12075;Dbxref=GenBank:WP_025303382.1;Name=WP_025303382.1;Ontology_term=GO:0016829,GO:0046872;gbkey=CDS;go_function=lyase activity|0016829||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019453472.1;locus_tag=IY40_RS12075;product=(R)-mandelonitrile lyase;protein_id=WP_025303382.1;transl_table=11 NZ_JPQY01000017.1 RefSeq gene 31173 31541 . - . ID=gene-IY40_RS12080;Name=IY40_RS12080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS12080;old_locus_tag=IY40_12285 NZ_JPQY01000017.1 Protein Homology CDS 31173 31541 . - 0 ID=cds-WP_025303381.1;Parent=gene-IY40_RS12080;Dbxref=GenBank:WP_025303381.1;Name=WP_025303381.1;Ontology_term=GO:0046677;gbkey=CDS;go_process=response to antibiotic|0046677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013813597.1;locus_tag=IY40_RS12080;product=glyoxalase superfamily protein;protein_id=WP_025303381.1;transl_table=11 NZ_JPQY01000017.1 RefSeq gene 31564 31977 . - . ID=gene-IY40_RS12085;Name=IY40_RS12085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS12085;old_locus_tag=IY40_12290 NZ_JPQY01000017.1 Protein Homology CDS 31564 31977 . - 0 ID=cds-WP_025303380.1;Parent=gene-IY40_RS12085;Dbxref=GenBank:WP_025303380.1;Name=WP_025303380.1;Ontology_term=GO:0005488;gbkey=CDS;go_function=binding|0005488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016927177.1;locus_tag=IY40_RS12085;product=GyrI-like domain-containing protein;protein_id=WP_025303380.1;transl_table=11 NZ_JPQY01000017.1 RefSeq gene 32076 33551 . - . ID=gene-IY40_RS12090;Name=gabD;gbkey=Gene;gene=gabD;gene_biotype=protein_coding;locus_tag=IY40_RS12090;old_locus_tag=IY40_12295 NZ_JPQY01000017.1 Protein Homology CDS 32076 33551 . - 0 ID=cds-WP_025303379.1;Parent=gene-IY40_RS12090;Dbxref=GenBank:WP_025303379.1;Name=WP_025303379.1;Ontology_term=GO:0009450,GO:0009013;gbkey=CDS;gene=gabD;go_function=succinate-semialdehyde dehydrogenase [NAD(P)+] activity|0009013||IEA;go_process=gamma-aminobutyric acid catabolic process|0009450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015378365.1;locus_tag=IY40_RS12090;product=NADP-dependent succinate-semialdehyde dehydrogenase;protein_id=WP_025303379.1;transl_table=11 NZ_JPQY01000017.1 RefSeq gene 33766 33981 . + . ID=gene-IY40_RS12095;Name=IY40_RS12095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS12095;old_locus_tag=IY40_12300 NZ_JPQY01000017.1 Protein Homology CDS 33766 33981 . + 0 ID=cds-WP_004935234.1;Parent=gene-IY40_RS12095;Dbxref=GenBank:WP_004935234.1;Name=WP_004935234.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006319295.1;locus_tag=IY40_RS12095;product=glycogen synthase;protein_id=WP_004935234.1;transl_table=11 NZ_JPQY01000017.1 RefSeq gene 34019 34933 . - . ID=gene-IY40_RS12100;Name=IY40_RS12100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS12100;old_locus_tag=IY40_12305 NZ_JPQY01000017.1 Protein Homology CDS 34019 34933 . - 0 ID=cds-WP_025303378.1;Parent=gene-IY40_RS12100;Dbxref=GenBank:WP_025303378.1;Name=WP_025303378.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004935231.1;locus_tag=IY40_RS12100;product=PNPOx family protein;protein_id=WP_025303378.1;transl_table=11 NZ_JPQY01000017.1 RefSeq gene 34938 35555 . - . ID=gene-IY40_RS12105;Name=IY40_RS12105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS12105;old_locus_tag=IY40_12310 NZ_JPQY01000017.1 Protein Homology CDS 34938 35555 . - 0 ID=cds-WP_043140032.1;Parent=gene-IY40_RS12105;Dbxref=GenBank:WP_043140032.1;Name=WP_043140032.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015378362.1;locus_tag=IY40_RS12105;product=glutathione S-transferase;protein_id=WP_043140032.1;transl_table=11 NZ_JPQY01000017.1 RefSeq gene 35654 36565 . + . ID=gene-IY40_RS12110;Name=IY40_RS12110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS12110;old_locus_tag=IY40_12315 NZ_JPQY01000017.1 Protein Homology CDS 35654 36565 . + 0 ID=cds-WP_043140035.1;Parent=gene-IY40_RS12110;Dbxref=GenBank:WP_043140035.1;Name=WP_043140035.1;Ontology_term=GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004935224.1;locus_tag=IY40_RS12110;product=LysR family transcriptional regulator;protein_id=WP_043140035.1;transl_table=11 NZ_JPQY01000017.1 RefSeq gene 36713 37510 . + . ID=gene-IY40_RS12115;Name=IY40_RS12115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS12115;old_locus_tag=IY40_12320 NZ_JPQY01000017.1 Protein Homology CDS 36713 37510 . + 0 ID=cds-WP_043140036.1;Parent=gene-IY40_RS12115;Dbxref=GenBank:WP_043140036.1;Name=WP_043140036.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016927182.1;locus_tag=IY40_RS12115;product=alpha/beta hydrolase;protein_id=WP_043140036.1;transl_table=11 NZ_JPQY01000017.1 RefSeq gene 37512 37883 . + . ID=gene-IY40_RS12120;Name=IY40_RS12120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS12120;old_locus_tag=IY40_12325 NZ_JPQY01000017.1 Protein Homology CDS 37512 37883 . + 0 ID=cds-WP_025303374.1;Parent=gene-IY40_RS12120;Dbxref=GenBank:WP_025303374.1;Name=WP_025303374.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016927183.1;locus_tag=IY40_RS12120;product=RidA family protein;protein_id=WP_025303374.1;transl_table=11 NZ_JPQY01000017.1 RefSeq gene 37942 39129 . + . ID=gene-IY40_RS12125;Name=IY40_RS12125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS12125;old_locus_tag=IY40_12330 NZ_JPQY01000017.1 Protein Homology CDS 37942 39129 . + 0 ID=cds-WP_025303373.1;Parent=gene-IY40_RS12125;Dbxref=GenBank:WP_025303373.1;Name=WP_025303373.1;Ontology_term=GO:0008483,GO:0030170;gbkey=CDS;go_function=transaminase activity|0008483||IEA,pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016927184.1;locus_tag=IY40_RS12125;product=amino acid aminotransferase;protein_id=WP_025303373.1;transl_table=11 ##sequence-region NZ_JPQY01000018.1 1 131914 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=615 NZ_JPQY01000018.1 RefSeq region 1 131914 . + . ID=NZ_JPQY01000018.1:1..131914;Dbxref=taxon:615;collected-by=Mahloro H. Serepa%3B Vincent M. Gray;collection-date=2013-04-11;country=South Africa: North West Province;gbkey=Src;genome=genomic;identified-by=Mahloro H. Serepa%3B Vincent M. Gray;isolation-source=entomopathogenic nematode Oscheius sp. MCB living in soil;mol_type=genomic DNA;nat-host=Oscheius sp. MCB;strain=MCB NZ_JPQY01000018.1 RefSeq pseudogene 1 323 . - . ID=gene-IY40_RS12130;Name=IY40_RS12130;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IY40_RS12130;old_locus_tag=IY40_12340;partial=true;pseudo=true;start_range=.,1 NZ_JPQY01000018.1 Protein Homology CDS 1 323 . - 0 ID=cds-IY40_RS12130;Parent=gene-IY40_RS12130;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019453713.1;locus_tag=IY40_RS12130;partial=true;product=MFS transporter;pseudo=true;start_range=.,1;transl_table=11 NZ_JPQY01000018.1 RefSeq gene 612 1487 . + . ID=gene-IY40_RS12135;Name=IY40_RS12135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS12135;old_locus_tag=IY40_12345 NZ_JPQY01000018.1 Protein Homology CDS 612 1487 . + 0 ID=cds-WP_025303658.1;Parent=gene-IY40_RS12135;Dbxref=GenBank:WP_025303658.1;Name=WP_025303658.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013813886.1;locus_tag=IY40_RS12135;product=LysR family transcriptional regulator;protein_id=WP_025303658.1;transl_table=11 NZ_JPQY01000018.1 RefSeq gene 1547 3004 . - . ID=gene-IY40_RS12140;Name=nuoN;gbkey=Gene;gene=nuoN;gene_biotype=protein_coding;locus_tag=IY40_RS12140;old_locus_tag=IY40_12350 NZ_JPQY01000018.1 Protein Homology CDS 1547 3004 . - 0 ID=cds-WP_025303659.1;Parent=gene-IY40_RS12140;Dbxref=GenBank:WP_025303659.1;Name=WP_025303659.1;Ontology_term=GO:0008137;gbkey=CDS;gene=nuoN;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012146011.1;locus_tag=IY40_RS12140;product=NADH-quinone oxidoreductase subunit NuoN;protein_id=WP_025303659.1;transl_table=11 NZ_JPQY01000018.1 RefSeq gene 3011 4540 . - . ID=gene-IY40_RS12145;Name=nuoM;gbkey=Gene;gene=nuoM;gene_biotype=protein_coding;locus_tag=IY40_RS12145;old_locus_tag=IY40_12355 NZ_JPQY01000018.1 Protein Homology CDS 3011 4540 . - 0 ID=cds-WP_025303660.1;Parent=gene-IY40_RS12145;Dbxref=GenBank:WP_025303660.1;Name=WP_025303660.1;Ontology_term=GO:0042773,GO:0008137;gbkey=CDS;gene=nuoM;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461259.1;locus_tag=IY40_RS12145;product=NADH-quinone oxidoreductase subunit M;protein_id=WP_025303660.1;transl_table=11 NZ_JPQY01000018.1 RefSeq gene 4636 6483 . - . ID=gene-IY40_RS12150;Name=nuoL;gbkey=Gene;gene=nuoL;gene_biotype=protein_coding;locus_tag=IY40_RS12150;old_locus_tag=IY40_12360 NZ_JPQY01000018.1 Protein Homology CDS 4636 6483 . - 0 ID=cds-WP_043140059.1;Parent=gene-IY40_RS12150;Dbxref=GenBank:WP_043140059.1;Name=WP_043140059.1;Ontology_term=GO:0042773,GO:0008137;gbkey=CDS;gene=nuoL;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019843991.1;locus_tag=IY40_RS12150;product=NADH-quinone oxidoreductase subunit L;protein_id=WP_043140059.1;transl_table=11 NZ_JPQY01000018.1 RefSeq gene 6480 6782 . - . ID=gene-IY40_RS12155;Name=nuoK;gbkey=Gene;gene=nuoK;gene_biotype=protein_coding;locus_tag=IY40_RS12155;old_locus_tag=IY40_12365 NZ_JPQY01000018.1 Protein Homology CDS 6480 6782 . - 0 ID=cds-WP_004936014.1;Parent=gene-IY40_RS12155;Dbxref=GenBank:WP_004936014.1;Name=WP_004936014.1;Ontology_term=GO:0042773,GO:0016651;gbkey=CDS;gene=nuoK;go_function=oxidoreductase activity%2C acting on NAD(P)H|0016651||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006683663.1;locus_tag=IY40_RS12155;product=NADH-quinone oxidoreductase subunit NuoK;protein_id=WP_004936014.1;transl_table=11 NZ_JPQY01000018.1 RefSeq gene 6779 7336 . - . ID=gene-IY40_RS12160;Name=nuoJ;gbkey=Gene;gene=nuoJ;gene_biotype=protein_coding;locus_tag=IY40_RS12160;old_locus_tag=IY40_12370 NZ_JPQY01000018.1 Protein Homology CDS 6779 7336 . - 0 ID=cds-WP_019453717.1;Parent=gene-IY40_RS12160;Dbxref=GenBank:WP_019453717.1;Name=WP_019453717.1;Ontology_term=GO:0008137;gbkey=CDS;gene=nuoJ;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013650177.1;locus_tag=IY40_RS12160;product=NADH-quinone oxidoreductase subunit J;protein_id=WP_019453717.1;transl_table=11 NZ_JPQY01000018.1 RefSeq gene 7350 7892 . - . ID=gene-IY40_RS12165;Name=nuoI;gbkey=Gene;gene=nuoI;gene_biotype=protein_coding;locus_tag=IY40_RS12165;old_locus_tag=IY40_12375 NZ_JPQY01000018.1 Protein Homology CDS 7350 7892 . - 0 ID=cds-WP_025160170.1;Parent=gene-IY40_RS12165;Dbxref=GenBank:WP_025160170.1;Name=WP_025160170.1;Ontology_term=GO:0016651,GO:0051539,GO:0016020;gbkey=CDS;gene=nuoI;go_component=membrane|0016020||IEA;go_function=oxidoreductase activity%2C acting on NAD(P)H|0016651||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015959823.1;locus_tag=IY40_RS12165;product=NADH-quinone oxidoreductase subunit NuoI;protein_id=WP_025160170.1;transl_table=11 NZ_JPQY01000018.1 RefSeq gene 7907 8884 . - . ID=gene-IY40_RS12170;Name=nuoH;gbkey=Gene;gene=nuoH;gene_biotype=protein_coding;locus_tag=IY40_RS12170;old_locus_tag=IY40_12380 NZ_JPQY01000018.1 Protein Homology CDS 7907 8884 . - 0 ID=cds-WP_025303661.1;Parent=gene-IY40_RS12170;Dbxref=GenBank:WP_025303661.1;Name=WP_025303661.1;gbkey=CDS;gene=nuoH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875065.1;locus_tag=IY40_RS12170;product=NADH-quinone oxidoreductase subunit NuoH;protein_id=WP_025303661.1;transl_table=11 NZ_JPQY01000018.1 RefSeq gene 8881 11619 . - . ID=gene-IY40_RS12175;Name=nuoG;gbkey=Gene;gene=nuoG;gene_biotype=protein_coding;locus_tag=IY40_RS12175;old_locus_tag=IY40_12385 NZ_JPQY01000018.1 Protein Homology CDS 8881 11619 . - 0 ID=cds-WP_043140271.1;Parent=gene-IY40_RS12175;Dbxref=GenBank:WP_043140271.1;Name=WP_043140271.1;Ontology_term=GO:0006120,GO:0050136,GO:0051536;gbkey=CDS;gene=nuoG;go_function=NADH dehydrogenase (quinone) (non-electrogenic) activity|0050136||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=mitochondrial electron transport%2C NADH to ubiquinone|0006120||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015689526.1;locus_tag=IY40_RS12175;product=NADH-quinone oxidoreductase subunit NuoG;protein_id=WP_043140271.1;transl_table=11 NZ_JPQY01000018.1 RefSeq gene 11697 13043 . - . ID=gene-IY40_RS12180;Name=nuoF;gbkey=Gene;gene=nuoF;gene_biotype=protein_coding;locus_tag=IY40_RS12180;old_locus_tag=IY40_12390 NZ_JPQY01000018.1 Protein Homology CDS 11697 13043 . - 0 ID=cds-WP_043140066.1;Parent=gene-IY40_RS12180;Dbxref=GenBank:WP_043140066.1;Name=WP_043140066.1;Ontology_term=GO:0008137,GO:0051539;gbkey=CDS;gene=nuoF;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012146018.1;locus_tag=IY40_RS12180;product=NADH-quinone oxidoreductase subunit NuoF;protein_id=WP_043140066.1;transl_table=11 NZ_JPQY01000018.1 RefSeq gene 13040 13591 . - . ID=gene-IY40_RS12185;Name=nuoE;gbkey=Gene;gene=nuoE;gene_biotype=protein_coding;locus_tag=IY40_RS12185;old_locus_tag=IY40_12395 NZ_JPQY01000018.1 Protein Homology CDS 13040 13591 . - 0 ID=cds-WP_004936034.1;Parent=gene-IY40_RS12185;Dbxref=GenBank:WP_004936034.1;Name=WP_004936034.1;Ontology_term=GO:0016491;gbkey=CDS;gene=nuoE;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014544718.1;locus_tag=IY40_RS12185;product=NADH-quinone oxidoreductase subunit NuoE;protein_id=WP_004936034.1;transl_table=11 NZ_JPQY01000018.1 RefSeq gene 13594 15390 . - . ID=gene-IY40_RS12190;Name=nuoC;gbkey=Gene;gene=nuoC;gene_biotype=protein_coding;locus_tag=IY40_RS12190;old_locus_tag=IY40_12400 NZ_JPQY01000018.1 Protein Homology CDS 13594 15390 . - 0 ID=cds-WP_025303662.1;Parent=gene-IY40_RS12190;Dbxref=GenBank:WP_025303662.1;Name=WP_025303662.1;Ontology_term=GO:0048038,GO:0050136,GO:0051287,GO:0030964;gbkey=CDS;gene=nuoC;go_component=NADH dehydrogenase complex|0030964||IEA;go_function=quinone binding|0048038||IEA,NADH dehydrogenase (quinone) (non-electrogenic) activity|0050136||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005159214.1;locus_tag=IY40_RS12190;product=NADH-quinone oxidoreductase subunit C/D;protein_id=WP_025303662.1;transl_table=11 NZ_JPQY01000018.1 RefSeq gene 15487 16161 . - . ID=gene-IY40_RS12195;Name=IY40_RS12195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS12195;old_locus_tag=IY40_12405 NZ_JPQY01000018.1 Protein Homology CDS 15487 16161 . - 0 ID=cds-WP_004936039.1;Parent=gene-IY40_RS12195;Dbxref=GenBank:WP_004936039.1;Name=WP_004936039.1;Ontology_term=GO:0008137,GO:0016655,GO:0048038,GO:0051539,GO:0005886,GO:0045271;gbkey=CDS;go_component=plasma membrane|0005886||IEA,respiratory chain complex I|0045271||IEA;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA,oxidoreductase activity%2C acting on NAD(P)H%2C quinone or similar compound as acceptor|0016655||IEA,quinone binding|0048038||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228044.1;locus_tag=IY40_RS12195;product=NuoB/complex I 20 kDa subunit family protein;protein_id=WP_004936039.1;transl_table=11 NZ_JPQY01000018.1 RefSeq gene 16177 16614 . - . ID=gene-IY40_RS12200;Name=nuoA;gbkey=Gene;gene=nuoA;gene_biotype=protein_coding;locus_tag=IY40_RS12200;old_locus_tag=IY40_12410 NZ_JPQY01000018.1 Protein Homology CDS 16177 16614 . - 0 ID=cds-WP_025303663.1;Parent=gene-IY40_RS12200;Dbxref=GenBank:WP_025303663.1;Name=WP_025303663.1;gbkey=CDS;gene=nuoA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012146022.1;locus_tag=IY40_RS12200;product=NADH-quinone oxidoreductase subunit NuoA;protein_id=WP_025303663.1;transl_table=11 NZ_JPQY01000018.1 RefSeq gene 17323 18267 . - . ID=gene-IY40_RS12205;Name=lrhA;gbkey=Gene;gene=lrhA;gene_biotype=protein_coding;locus_tag=IY40_RS12205;old_locus_tag=IY40_12415 NZ_JPQY01000018.1 Protein Homology CDS 17323 18267 . - 0 ID=cds-WP_025303664.1;Parent=gene-IY40_RS12205;Dbxref=GenBank:WP_025303664.1;Name=WP_025303664.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=lrhA;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003854247.1;locus_tag=IY40_RS12205;product=transcriptional regulator LrhA;protein_id=WP_025303664.1;transl_table=11 NZ_JPQY01000018.1 RefSeq gene 19124 20338 . + . ID=gene-IY40_RS12210;Name=IY40_RS12210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS12210;old_locus_tag=IY40_12420 NZ_JPQY01000018.1 Protein Homology CDS 19124 20338 . + 0 ID=cds-WP_025303665.1;Parent=gene-IY40_RS12210;Dbxref=GenBank:WP_025303665.1;Name=WP_025303665.1;Ontology_term=GO:0009058,GO:0003824,GO:0030170;gbkey=CDS;go_function=catalytic activity|0003824||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013365445.1;locus_tag=IY40_RS12210;product=pyridoxal phosphate-dependent aminotransferase;protein_id=WP_025303665.1;transl_table=11 NZ_JPQY01000018.1 RefSeq gene 20446 21045 . + . ID=gene-IY40_RS12215;Name=yfbR;gbkey=Gene;gene=yfbR;gene_biotype=protein_coding;locus_tag=IY40_RS12215;old_locus_tag=IY40_12425 NZ_JPQY01000018.1 Protein Homology CDS 20446 21045 . + 0 ID=cds-WP_025303666.1;Parent=gene-IY40_RS12215;Dbxref=GenBank:WP_025303666.1;Name=WP_025303666.1;Ontology_term=GO:0002953;gbkey=CDS;gene=yfbR;go_function=5'-deoxynucleotidase activity|0002953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006709625.1;locus_tag=IY40_RS12215;product=5'-deoxynucleotidase;protein_id=WP_025303666.1;transl_table=11 NZ_JPQY01000018.1 RefSeq gene 21073 22923 . - . ID=gene-IY40_RS12220;Name=IY40_RS12220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS12220;old_locus_tag=IY40_12430 NZ_JPQY01000018.1 Protein Homology CDS 21073 22923 . - 0 ID=cds-WP_072008257.1;Parent=gene-IY40_RS12220;Dbxref=GenBank:WP_072008257.1;Name=WP_072008257.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017893494.1;locus_tag=IY40_RS12220;product=SLC13 family permease;protein_id=WP_072008257.1;transl_table=11 NZ_JPQY01000018.1 RefSeq gene 23003 23659 . - . ID=gene-IY40_RS12225;Name=IY40_RS12225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS12225;old_locus_tag=IY40_12435 NZ_JPQY01000018.1 Protein Homology CDS 23003 23659 . - 0 ID=cds-WP_004936056.1;Parent=gene-IY40_RS12225;Dbxref=GenBank:WP_004936056.1;Name=WP_004936056.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004936056.1;locus_tag=IY40_RS12225;product=sugar phosphatase;protein_id=WP_004936056.1;transl_table=11 NZ_JPQY01000018.1 RefSeq gene 23677 24171 . - . ID=gene-IY40_RS12230;Name=IY40_RS12230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS12230;old_locus_tag=IY40_12440 NZ_JPQY01000018.1 Protein Homology CDS 23677 24171 . - 0 ID=cds-WP_016926898.1;Parent=gene-IY40_RS12230;Dbxref=GenBank:WP_016926898.1;Name=WP_016926898.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461277.1;locus_tag=IY40_RS12230;product=YfbU family protein;protein_id=WP_016926898.1;transl_table=11 NZ_JPQY01000018.1 RefSeq gene 24315 24770 . - . ID=gene-IY40_RS12235;Name=yfbV;gbkey=Gene;gene=yfbV;gene_biotype=protein_coding;locus_tag=IY40_RS12235;old_locus_tag=IY40_12445 NZ_JPQY01000018.1 Protein Homology CDS 24315 24770 . - 0 ID=cds-WP_004936061.1;Parent=gene-IY40_RS12235;Dbxref=GenBank:WP_004936061.1;Name=WP_004936061.1;gbkey=CDS;gene=yfbV;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012146029.1;locus_tag=IY40_RS12235;product=terminus macrodomain insulation protein YfbV;protein_id=WP_004936061.1;transl_table=11 NZ_JPQY01000018.1 RefSeq gene 25129 26331 . + . ID=gene-IY40_RS12240;Name=ackA;gbkey=Gene;gene=ackA;gene_biotype=protein_coding;locus_tag=IY40_RS12240;old_locus_tag=IY40_12450 NZ_JPQY01000018.1 Protein Homology CDS 25129 26331 . + 0 ID=cds-WP_025303669.1;Parent=gene-IY40_RS12240;Dbxref=GenBank:WP_025303669.1;Name=WP_025303669.1;gbkey=CDS;gene=ackA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129491.1;locus_tag=IY40_RS12240;product=acetate kinase;protein_id=WP_025303669.1;transl_table=11 NZ_JPQY01000018.1 RefSeq gene 26406 28568 . + . ID=gene-IY40_RS12245;Name=pta;gbkey=Gene;gene=pta;gene_biotype=protein_coding;locus_tag=IY40_RS12245;old_locus_tag=IY40_12455 NZ_JPQY01000018.1 Protein Homology CDS 26406 28568 . + 0 ID=cds-WP_043140081.1;Parent=gene-IY40_RS12245;Dbxref=GenBank:WP_043140081.1;Name=WP_043140081.1;Ontology_term=GO:0016407;gbkey=CDS;gene=pta;go_function=acetyltransferase activity|0016407||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004936066.1;locus_tag=IY40_RS12245;product=phosphate acetyltransferase;protein_id=WP_043140081.1;transl_table=11 NZ_JPQY01000018.1 RefSeq gene 28632 29591 . - . ID=gene-IY40_RS12250;Name=IY40_RS12250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS12250;old_locus_tag=IY40_12460 NZ_JPQY01000018.1 Protein Homology CDS 28632 29591 . - 0 ID=cds-WP_043140084.1;Parent=gene-IY40_RS12250;Dbxref=GenBank:WP_043140084.1;Name=WP_043140084.1;Ontology_term=GO:0016740;gbkey=CDS;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016926893.1;locus_tag=IY40_RS12250;product=transketolase family protein;protein_id=WP_043140084.1;transl_table=11 NZ_JPQY01000018.1 RefSeq gene 29584 30435 . - . ID=gene-IY40_RS12255;Name=IY40_RS12255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS12255;old_locus_tag=IY40_12465 NZ_JPQY01000018.1 Protein Homology CDS 29584 30435 . - 0 ID=cds-WP_043140087.1;Parent=gene-IY40_RS12255;Dbxref=GenBank:WP_043140087.1;Name=WP_043140087.1;Ontology_term=GO:0016740;gbkey=CDS;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004936071.1;locus_tag=IY40_RS12255;product=transketolase;protein_id=WP_043140087.1;transl_table=11 NZ_JPQY01000018.1 RefSeq gene 30448 31827 . - . ID=gene-IY40_RS12260;Name=IY40_RS12260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS12260;old_locus_tag=IY40_12470 NZ_JPQY01000018.1 Protein Homology CDS 30448 31827 . - 0 ID=cds-WP_043140091.1;Parent=gene-IY40_RS12260;Dbxref=GenBank:WP_043140091.1;Name=WP_043140091.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019453728.1;locus_tag=IY40_RS12260;product=PTS ascorbate transporter subunit IIC;protein_id=WP_043140091.1;transl_table=11 NZ_JPQY01000018.1 RefSeq gene 31851 32132 . - . ID=gene-IY40_RS12265;Name=IY40_RS12265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS12265;old_locus_tag=IY40_12475 NZ_JPQY01000018.1 Protein Homology CDS 31851 32132 . - 0 ID=cds-WP_025303676.1;Parent=gene-IY40_RS12265;Dbxref=GenBank:WP_025303676.1;Name=WP_025303676.1;Ontology_term=GO:0008643,GO:0009401,GO:0008982;gbkey=CDS;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004936076.1;locus_tag=IY40_RS12265;product=PTS sugar transporter subunit IIB;protein_id=WP_025303676.1;transl_table=11 NZ_JPQY01000018.1 RefSeq gene 32225 32668 . - . ID=gene-IY40_RS12270;Name=IY40_RS12270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS12270;old_locus_tag=IY40_12480 NZ_JPQY01000018.1 Protein Homology CDS 32225 32668 . - 0 ID=cds-WP_025303677.1;Parent=gene-IY40_RS12270;Dbxref=GenBank:WP_025303677.1;Name=WP_025303677.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:0016301,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_function=kinase activity|0016301||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016926889.1;locus_tag=IY40_RS12270;product=PTS sugar transporter subunit IIA;protein_id=WP_025303677.1;transl_table=11 NZ_JPQY01000018.1 RefSeq gene 32979 33998 . + . ID=gene-IY40_RS12275;Name=IY40_RS12275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS12275;old_locus_tag=IY40_12485 NZ_JPQY01000018.1 Protein Homology CDS 32979 33998 . + 0 ID=cds-WP_043140096.1;Parent=gene-IY40_RS12275;Dbxref=GenBank:WP_043140096.1;Name=WP_043140096.1;Ontology_term=GO:0006351,GO:0006355,GO:0045892,GO:0000976,GO:0003677,GO:0003700,GO:0043565;gbkey=CDS;go_function=transcription cis-regulatory region binding|0000976||IEA,DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=DNA-templated transcription|0006351||IEA,regulation of DNA-templated transcription|0006355||IEA,negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017692998.1;locus_tag=IY40_RS12275;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_043140096.1;transl_table=11 NZ_JPQY01000018.1 RefSeq gene 34053 34598 . - . ID=gene-IY40_RS12280;Name=yfcD;gbkey=Gene;gene=yfcD;gene_biotype=protein_coding;locus_tag=IY40_RS12280;old_locus_tag=IY40_12490 NZ_JPQY01000018.1 Protein Homology CDS 34053 34598 . - 0 ID=cds-WP_025303679.1;Parent=gene-IY40_RS12280;Dbxref=GenBank:WP_025303679.1;Name=WP_025303679.1;Ontology_term=GO:0016817;gbkey=CDS;gene=yfcD;go_function=hydrolase activity%2C acting on acid anhydrides|0016817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012146032.1;locus_tag=IY40_RS12280;product=NUDIX hydrolase YfcD;protein_id=WP_025303679.1;transl_table=11 NZ_JPQY01000018.1 RefSeq gene 34698 35249 . - . ID=gene-IY40_RS12285;Name=yfcE;gbkey=Gene;gene=yfcE;gene_biotype=protein_coding;locus_tag=IY40_RS12285;old_locus_tag=IY40_12495 NZ_JPQY01000018.1 Protein Homology CDS 34698 35249 . - 0 ID=cds-WP_043140101.1;Parent=gene-IY40_RS12285;Dbxref=GenBank:WP_043140101.1;Name=WP_043140101.1;gbkey=CDS;gene=yfcE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015378587.1;locus_tag=IY40_RS12285;product=phosphodiesterase;protein_id=WP_043140101.1;transl_table=11 NZ_JPQY01000018.1 RefSeq gene 35483 36112 . + . ID=gene-IY40_RS12290;Name=yfcG;gbkey=Gene;gene=yfcG;gene_biotype=protein_coding;locus_tag=IY40_RS12290;old_locus_tag=IY40_12500 NZ_JPQY01000018.1 Protein Homology CDS 35483 36112 . + 0 ID=cds-WP_043140104.1;Parent=gene-IY40_RS12290;Dbxref=GenBank:WP_043140104.1;Name=WP_043140104.1;gbkey=CDS;gene=yfcG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012146034.1;locus_tag=IY40_RS12290;product=GSH-dependent disulfide bond oxidoreductase;protein_id=WP_043140104.1;transl_table=11 NZ_JPQY01000018.1 RefSeq gene 36224 36595 . + . ID=gene-IY40_RS12295;Name=folX;gbkey=Gene;gene=folX;gene_biotype=protein_coding;locus_tag=IY40_RS12295;old_locus_tag=IY40_12505 NZ_JPQY01000018.1 Protein Homology CDS 36224 36595 . + 0 ID=cds-WP_025303682.1;Parent=gene-IY40_RS12295;Dbxref=GenBank:WP_025303682.1;Name=WP_025303682.1;Ontology_term=GO:0006760,GO:0004150;gbkey=CDS;gene=folX;go_function=dihydroneopterin aldolase activity|0004150||IEA;go_process=folic acid-containing compound metabolic process|0006760||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019453735.1;locus_tag=IY40_RS12295;product=dihydroneopterin triphosphate 2'-epimerase;protein_id=WP_025303682.1;transl_table=11 NZ_JPQY01000018.1 RefSeq gene 36612 37526 . + . ID=gene-IY40_RS12300;Name=IY40_RS12300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS12300;old_locus_tag=IY40_12510 NZ_JPQY01000018.1 Protein Homology CDS 36612 37526 . + 0 ID=cds-WP_043140109.1;Parent=gene-IY40_RS12300;Dbxref=GenBank:WP_043140109.1;Name=WP_043140109.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019453736.1;locus_tag=IY40_RS12300;product=TIGR01777 family oxidoreductase;protein_id=WP_043140109.1;transl_table=11 NZ_JPQY01000018.1 RefSeq gene 37534 38307 . - . ID=gene-IY40_RS12305;Name=hisP;gbkey=Gene;gene=hisP;gene_biotype=protein_coding;locus_tag=IY40_RS12305;old_locus_tag=IY40_12515 NZ_JPQY01000018.1 Protein Homology CDS 37534 38307 . - 0 ID=cds-WP_004936098.1;Parent=gene-IY40_RS12305;Dbxref=GenBank:WP_004936098.1;Name=WP_004936098.1;gbkey=CDS;gene=hisP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009088986.1;locus_tag=IY40_RS12305;product=histidine ABC transporter ATP-binding protein HisP;protein_id=WP_004936098.1;transl_table=11 NZ_JPQY01000018.1 RefSeq gene 38329 39033 . - . ID=gene-IY40_RS12310;Name=IY40_RS12310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS12310;old_locus_tag=IY40_12520 NZ_JPQY01000018.1 Protein Homology CDS 38329 39033 . - 0 ID=cds-WP_043140113.1;Parent=gene-IY40_RS12310;Dbxref=GenBank:WP_043140113.1;Name=WP_043140113.1;Ontology_term=GO:0022857,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013813905.1;locus_tag=IY40_RS12310;product=ABC transporter permease;protein_id=WP_043140113.1;transl_table=11 NZ_JPQY01000018.1 RefSeq gene 39030 39716 . - . ID=gene-IY40_RS12315;Name=IY40_RS12315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS12315;old_locus_tag=IY40_12525 NZ_JPQY01000018.1 Protein Homology CDS 39030 39716 . - 0 ID=cds-WP_043140117.1;Parent=gene-IY40_RS12315;Dbxref=GenBank:WP_043140117.1;Name=WP_043140117.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012124147.1;locus_tag=IY40_RS12315;product=histidine ABC transporter permease HisQ;protein_id=WP_043140117.1;transl_table=11 NZ_JPQY01000018.1 RefSeq gene 39799 40581 . - . ID=gene-IY40_RS12320;Name=hisJ;gbkey=Gene;gene=hisJ;gene_biotype=protein_coding;locus_tag=IY40_RS12320;old_locus_tag=IY40_12530 NZ_JPQY01000018.1 Protein Homology CDS 39799 40581 . - 0 ID=cds-WP_004936109.1;Parent=gene-IY40_RS12320;Dbxref=GenBank:WP_004936109.1;Name=WP_004936109.1;gbkey=CDS;gene=hisJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004875281.1;locus_tag=IY40_RS12320;product=histidine ABC transporter substrate-binding protein HisJ;protein_id=WP_004936109.1;transl_table=11 NZ_JPQY01000018.1 RefSeq gene 40885 41457 . - . ID=gene-IY40_RS12325;Name=IY40_RS12325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS12325;old_locus_tag=IY40_12535 NZ_JPQY01000018.1 Protein Homology CDS 40885 41457 . - 0 ID=cds-WP_019453741.1;Parent=gene-IY40_RS12325;Dbxref=GenBank:WP_019453741.1;Name=WP_019453741.1;Ontology_term=GO:0010181,GO:0016831,GO:0106141;gbkey=CDS;go_function=FMN binding|0010181||IEA,carboxy-lyase activity|0016831||IEA,flavin prenyltransferase activity|0106141||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013813906.1;locus_tag=IY40_RS12325;product=UbiX family flavin prenyltransferase;protein_id=WP_019453741.1;transl_table=11 NZ_JPQY01000018.1 RefSeq gene 41589 43106 . - . ID=gene-IY40_RS12330;Name=purF;gbkey=Gene;gene=purF;gene_biotype=protein_coding;locus_tag=IY40_RS12330;old_locus_tag=IY40_12540 NZ_JPQY01000018.1 Protein Homology CDS 41589 43106 . - 0 ID=cds-WP_025303688.1;Parent=gene-IY40_RS12330;Dbxref=GenBank:WP_025303688.1;Name=WP_025303688.1;Ontology_term=GO:0009113,GO:0004044;gbkey=CDS;gene=purF;go_function=amidophosphoribosyltransferase activity|0004044||IEA;go_process=purine nucleobase biosynthetic process|0009113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006820991.1;locus_tag=IY40_RS12330;product=amidophosphoribosyltransferase;protein_id=WP_025303688.1;transl_table=11 NZ_JPQY01000018.1 RefSeq gene 43128 43628 . - . ID=gene-IY40_RS12335;Name=cvpA;gbkey=Gene;gene=cvpA;gene_biotype=protein_coding;locus_tag=IY40_RS12335;old_locus_tag=IY40_12545 NZ_JPQY01000018.1 Protein Homology CDS 43128 43628 . - 0 ID=cds-WP_004936119.1;Parent=gene-IY40_RS12335;Dbxref=GenBank:WP_004936119.1;Name=WP_004936119.1;gbkey=CDS;gene=cvpA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004936119.1;locus_tag=IY40_RS12335;product=colicin V production protein;protein_id=WP_004936119.1;transl_table=11 NZ_JPQY01000018.1 RefSeq gene 43863 44600 . - . ID=gene-IY40_RS12340;Name=dedD;gbkey=Gene;gene=dedD;gene_biotype=protein_coding;locus_tag=IY40_RS12340;old_locus_tag=IY40_12550 NZ_JPQY01000018.1 Protein Homology CDS 43863 44600 . - 0 ID=cds-WP_025303689.1;Parent=gene-IY40_RS12340;Dbxref=GenBank:WP_025303689.1;Name=WP_025303689.1;Ontology_term=GO:0032506,GO:0042834,GO:0030428;gbkey=CDS;gene=dedD;go_component=cell septum|0030428||IEA;go_function=peptidoglycan binding|0042834||IEA;go_process=cytokinetic process|0032506||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004936123.1;locus_tag=IY40_RS12340;product=cell division protein DedD;protein_id=WP_025303689.1;transl_table=11 NZ_JPQY01000018.1 RefSeq gene 44601 45866 . - . ID=gene-IY40_RS12345;Name=folC;gbkey=Gene;gene=folC;gene_biotype=protein_coding;locus_tag=IY40_RS12345;old_locus_tag=IY40_12555 NZ_JPQY01000018.1 Protein Homology CDS 44601 45866 . - 0 ID=cds-WP_043140120.1;Parent=gene-IY40_RS12345;Dbxref=GenBank:WP_043140120.1;Name=WP_043140120.1;Ontology_term=GO:0009396,GO:0004326,GO:0005524,GO:0016874;gbkey=CDS;gene=folC;go_function=tetrahydrofolylpolyglutamate synthase activity|0004326||IEA,ATP binding|0005524||IEA,ligase activity|0016874||IEA;go_process=folic acid-containing compound biosynthetic process|0009396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015378592.1;locus_tag=IY40_RS12345;product=bifunctional tetrahydrofolate synthase/dihydrofolate synthase;protein_id=WP_043140120.1;transl_table=11 NZ_JPQY01000018.1 RefSeq gene 46058 46966 . - . ID=gene-IY40_RS12350;Name=accD;gbkey=Gene;gene=accD;gene_biotype=protein_coding;locus_tag=IY40_RS12350;old_locus_tag=IY40_12560 NZ_JPQY01000018.1 Protein Homology CDS 46058 46966 . - 0 ID=cds-WP_025303691.1;Parent=gene-IY40_RS12350;Dbxref=GenBank:WP_025303691.1;Name=WP_025303691.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;gene=accD;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012146046.1;locus_tag=IY40_RS12350;product=acetyl-CoA carboxylase%2C carboxyltransferase subunit beta;protein_id=WP_025303691.1;transl_table=11 NZ_JPQY01000018.1 RefSeq gene 47199 47861 . - . ID=gene-IY40_RS12355;Name=IY40_RS12355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS12355;old_locus_tag=IY40_12565 NZ_JPQY01000018.1 Protein Homology CDS 47199 47861 . - 0 ID=cds-WP_004936130.1;Parent=gene-IY40_RS12355;Dbxref=GenBank:WP_004936130.1;Name=WP_004936130.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019453745.1;locus_tag=IY40_RS12355;product=DedA family protein;protein_id=WP_004936130.1;transl_table=11 NZ_JPQY01000018.1 RefSeq gene 47940 48761 . - . ID=gene-IY40_RS12360;Name=truA;gbkey=Gene;gene=truA;gene_biotype=protein_coding;locus_tag=IY40_RS12360;old_locus_tag=IY40_12570 NZ_JPQY01000018.1 Protein Homology CDS 47940 48761 . - 0 ID=cds-WP_043140123.1;Parent=gene-IY40_RS12360;Dbxref=GenBank:WP_043140123.1;Name=WP_043140123.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;gene=truA;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012146048.1;locus_tag=IY40_RS12360;product=tRNA pseudouridine(38-40) synthase TruA;protein_id=WP_043140123.1;transl_table=11 NZ_JPQY01000018.1 RefSeq gene 48761 49771 . - . ID=gene-IY40_RS12365;Name=IY40_RS12365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS12365;old_locus_tag=IY40_12575 NZ_JPQY01000018.1 Protein Homology CDS 48761 49771 . - 0 ID=cds-WP_025303693.1;Parent=gene-IY40_RS12365;Dbxref=GenBank:WP_025303693.1;Name=WP_025303693.1;Ontology_term=GO:0008652,GO:0016620,GO:0046983,GO:0051287;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA,protein dimerization activity|0046983||IEA,NAD binding|0051287||IEA;go_process=amino acid biosynthetic process|0008652||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209726.1;locus_tag=IY40_RS12365;product=aspartate-semialdehyde dehydrogenase;protein_id=WP_025303693.1;transl_table=11 NZ_JPQY01000018.1 RefSeq gene 49882 51003 . - . ID=gene-IY40_RS12370;Name=pdxB;gbkey=Gene;gene=pdxB;gene_biotype=protein_coding;locus_tag=IY40_RS12370;old_locus_tag=IY40_12580 NZ_JPQY01000018.1 Protein Homology CDS 49882 51003 . - 0 ID=cds-WP_043140127.1;Parent=gene-IY40_RS12370;Dbxref=GenBank:WP_043140127.1;Name=WP_043140127.1;Ontology_term=GO:0008615,GO:0033711,GO:0046983,GO:0051287;gbkey=CDS;gene=pdxB;go_function=4-phosphoerythronate dehydrogenase activity|0033711||IEA,protein dimerization activity|0046983||IEA,NAD binding|0051287||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015378595.1;locus_tag=IY40_RS12370;product=4-phosphoerythronate dehydrogenase PdxB;protein_id=WP_043140127.1;transl_table=11 NZ_JPQY01000018.1 RefSeq gene 51057 51830 . - . ID=gene-IY40_RS12375;Name=IY40_RS12375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS12375;old_locus_tag=IY40_12585 NZ_JPQY01000018.1 Protein Homology CDS 51057 51830 . - 0 ID=cds-WP_025303695.1;Parent=gene-IY40_RS12375;Dbxref=GenBank:WP_025303695.1;Name=WP_025303695.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012146051.1;locus_tag=IY40_RS12375;product=AraC family transcriptional regulator;protein_id=WP_025303695.1;transl_table=11 NZ_JPQY01000018.1 RefSeq gene 51948 52868 . + . ID=gene-IY40_RS12380;Name=IY40_RS12380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS12380;old_locus_tag=IY40_12590 NZ_JPQY01000018.1 Protein Homology CDS 51948 52868 . + 0 ID=cds-WP_019453750.1;Parent=gene-IY40_RS12380;Dbxref=GenBank:WP_019453750.1;Name=WP_019453750.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019453750.1;locus_tag=IY40_RS12380;product=DMT family transporter;protein_id=WP_019453750.1;transl_table=11 NZ_JPQY01000018.1 RefSeq gene 52865 54283 . - . ID=gene-IY40_RS12385;Name=IY40_RS12385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS12385;old_locus_tag=IY40_12595 NZ_JPQY01000018.1 Protein Homology CDS 52865 54283 . - 0 ID=cds-WP_043140131.1;Parent=gene-IY40_RS12385;Dbxref=GenBank:WP_043140131.1;Name=WP_043140131.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012146053.1;locus_tag=IY40_RS12385;product=sensor histidine kinase;protein_id=WP_043140131.1;transl_table=11 NZ_JPQY01000018.1 RefSeq gene 54270 54944 . - . ID=gene-IY40_RS12390;Name=tctD;gbkey=Gene;gene=tctD;gene_biotype=protein_coding;locus_tag=IY40_RS12390;old_locus_tag=IY40_12600 NZ_JPQY01000018.1 Protein Homology CDS 54270 54944 . - 0 ID=cds-WP_025303698.1;Parent=gene-IY40_RS12390;Dbxref=GenBank:WP_025303698.1;Name=WP_025303698.1;gbkey=CDS;gene=tctD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012146054.1;locus_tag=IY40_RS12390;product=transcriptional regulator TctD;protein_id=WP_025303698.1;transl_table=11 NZ_JPQY01000018.1 RefSeq gene 55112 55441 . - . ID=gene-IY40_RS12395;Name=IY40_RS12395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS12395;old_locus_tag=IY40_12605 NZ_JPQY01000018.1 Protein Homology CDS 55112 55441 . - 0 ID=cds-WP_025303699.1;Parent=gene-IY40_RS12395;Dbxref=GenBank:WP_025303699.1;Name=WP_025303699.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016926875.1;locus_tag=IY40_RS12395;product=hypothetical protein;protein_id=WP_025303699.1;transl_table=11 NZ_JPQY01000018.1 RefSeq gene 55717 56697 . + . ID=gene-IY40_RS12400;Name=IY40_RS12400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS12400;old_locus_tag=IY40_12610 NZ_JPQY01000018.1 Protein Homology CDS 55717 56697 . + 0 ID=cds-WP_025303700.1;Parent=gene-IY40_RS12400;Dbxref=GenBank:WP_025303700.1;Name=WP_025303700.1;Ontology_term=GO:0042597;gbkey=CDS;go_component=periplasmic space|0042597||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461712.1;locus_tag=IY40_RS12400;product=Bug family tripartite tricarboxylate transporter substrate binding protein;protein_id=WP_025303700.1;transl_table=11 NZ_JPQY01000018.1 RefSeq gene 56713 57144 . + . ID=gene-IY40_RS12405;Name=IY40_RS12405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS12405;old_locus_tag=IY40_12615 NZ_JPQY01000018.1 Protein Homology CDS 56713 57144 . + 0 ID=cds-WP_025303701.1;Parent=gene-IY40_RS12405;Dbxref=GenBank:WP_025303701.1;Name=WP_025303701.1;Ontology_term=GO:0005215;gbkey=CDS;go_function=transporter activity|0005215||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004388274.1;locus_tag=IY40_RS12405;product=tripartite tricarboxylate transporter TctB family protein;protein_id=WP_025303701.1;transl_table=11 NZ_JPQY01000018.1 RefSeq gene 57156 58673 . + . ID=gene-IY40_RS12410;Name=IY40_RS12410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS12410;old_locus_tag=IY40_12620 NZ_JPQY01000018.1 Protein Homology CDS 57156 58673 . + 0 ID=cds-WP_043140139.1;Parent=gene-IY40_RS12410;Dbxref=GenBank:WP_043140139.1;Name=WP_043140139.1;Ontology_term=GO:0006810,GO:0042597;gbkey=CDS;go_component=periplasmic space|0042597||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015378600.1;locus_tag=IY40_RS12410;product=tripartite tricarboxylate transporter permease;protein_id=WP_043140139.1;transl_table=11 NZ_JPQY01000018.1 RefSeq gene 59187 59984 . + . ID=gene-IY40_RS25970;Name=IY40_RS25970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS25970 NZ_JPQY01000018.1 Protein Homology CDS 59187 59984 . + 0 ID=cds-WP_152561304.1;Parent=gene-IY40_RS25970;Dbxref=GenBank:WP_152561304.1;Name=WP_152561304.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF049211.1;locus_tag=IY40_RS25970;product=MrpH family fimbial adhesin;protein_id=WP_152561304.1;transl_table=11 NZ_JPQY01000018.1 RefSeq gene 60097 60729 . - . ID=gene-IY40_RS12415;Name=IY40_RS12415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS12415;old_locus_tag=IY40_12625 NZ_JPQY01000018.1 Protein Homology CDS 60097 60729 . - 0 ID=cds-WP_043140141.1;Parent=gene-IY40_RS12415;Dbxref=GenBank:WP_043140141.1;Name=WP_043140141.1;Ontology_term=GO:0046677,GO:0016746;gbkey=CDS;go_function=acyltransferase activity|0016746||IEA;go_process=response to antibiotic|0046677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013813921.1;locus_tag=IY40_RS12415;product=CatB-related O-acetyltransferase;protein_id=WP_043140141.1;transl_table=11 NZ_JPQY01000018.1 RefSeq gene 60886 61881 . - . ID=gene-IY40_RS12420;Name=IY40_RS12420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS12420;old_locus_tag=IY40_12630 NZ_JPQY01000018.1 Protein Homology CDS 60886 61881 . - 0 ID=cds-WP_043140143.1;Parent=gene-IY40_RS12420;Dbxref=GenBank:WP_043140143.1;Name=WP_043140143.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013813922.1;locus_tag=IY40_RS12420;product=DMT family transporter;protein_id=WP_043140143.1;transl_table=11 NZ_JPQY01000018.1 RefSeq gene 62054 63520 . + . ID=gene-IY40_RS12425;Name=pdxR;gbkey=Gene;gene=pdxR;gene_biotype=protein_coding;locus_tag=IY40_RS12425;old_locus_tag=IY40_12635 NZ_JPQY01000018.1 Protein Homology CDS 62054 63520 . + 0 ID=cds-WP_043140144.1;Parent=gene-IY40_RS12425;Dbxref=GenBank:WP_043140144.1;Name=WP_043140144.1;Ontology_term=GO:0042823,GO:2000142,GO:0070279;gbkey=CDS;gene=pdxR;go_function=vitamin B6 binding|0070279||IEA;go_process=pyridoxal phosphate biosynthetic process|0042823||IEA,regulation of DNA-templated transcription initiation|2000142||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004936165.1;locus_tag=IY40_RS12425;product=MocR-like pyridoxine biosynthesis transcription factor PdxR;protein_id=WP_043140144.1;transl_table=11 NZ_JPQY01000018.1 RefSeq gene 63517 64017 . - . ID=gene-IY40_RS12430;Name=IY40_RS12430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS12430;old_locus_tag=IY40_12640 NZ_JPQY01000018.1 Protein Homology CDS 63517 64017 . - 0 ID=cds-WP_043140146.1;Parent=gene-IY40_RS12430;Dbxref=GenBank:WP_043140146.1;Name=WP_043140146.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019453759.1;locus_tag=IY40_RS12430;product=protein disulfide oxidoreductase;protein_id=WP_043140146.1;transl_table=11 NZ_JPQY01000018.1 RefSeq gene 64010 64726 . - . ID=gene-IY40_RS12435;Name=IY40_RS12435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS12435;old_locus_tag=IY40_12645 NZ_JPQY01000018.1 Protein Homology CDS 64010 64726 . - 0 ID=cds-WP_043140149.1;Parent=gene-IY40_RS12435;Dbxref=GenBank:WP_043140149.1;Name=WP_043140149.1;Ontology_term=GO:0015036;gbkey=CDS;go_function=disulfide oxidoreductase activity|0015036||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004936169.1;locus_tag=IY40_RS12435;product=DsbA family protein;protein_id=WP_043140149.1;transl_table=11 NZ_JPQY01000018.1 RefSeq gene 64723 66759 . - . ID=gene-IY40_RS12440;Name=IY40_RS12440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS12440;old_locus_tag=IY40_12650 NZ_JPQY01000018.1 Protein Homology CDS 64723 66759 . - 0 ID=cds-WP_043140150.1;Parent=gene-IY40_RS12440;Dbxref=GenBank:WP_043140150.1;Name=WP_043140150.1;Ontology_term=GO:0009055,GO:0015036;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,disulfide oxidoreductase activity|0015036||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013813925.1;locus_tag=IY40_RS12440;product=protein-disulfide reductase DsbD family protein;protein_id=WP_043140150.1;transl_table=11 NZ_JPQY01000018.1 RefSeq gene 66809 67171 . - . ID=gene-IY40_RS12445;Name=IY40_RS12445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS12445;old_locus_tag=IY40_12655 NZ_JPQY01000018.1 Protein Homology CDS 66809 67171 . - 0 ID=cds-WP_043140154.1;Parent=gene-IY40_RS12445;Dbxref=GenBank:WP_043140154.1;Name=WP_043140154.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006326933.1;locus_tag=IY40_RS12445;product=hypothetical protein;protein_id=WP_043140154.1;transl_table=11 NZ_JPQY01000018.1 RefSeq gene 67376 68404 . + . ID=gene-IY40_RS12450;Name=flk;gbkey=Gene;gene=flk;gene_biotype=protein_coding;locus_tag=IY40_RS12450;old_locus_tag=IY40_12660 NZ_JPQY01000018.1 Protein Homology CDS 67376 68404 . + 0 ID=cds-WP_025303709.1;Parent=gene-IY40_RS12450;Dbxref=GenBank:WP_025303709.1;Name=WP_025303709.1;Ontology_term=GO:0010468,GO:0016020;gbkey=CDS;gene=flk;go_component=membrane|0016020||IEA;go_process=regulation of gene expression|0010468||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015378608.1;locus_tag=IY40_RS12450;product=flagella biosynthesis regulator Flk;protein_id=WP_025303709.1;transl_table=11 NZ_JPQY01000018.1 RefSeq gene 68409 68864 . - . ID=gene-IY40_RS12455;Name=IY40_RS12455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS12455;old_locus_tag=IY40_12665 NZ_JPQY01000018.1 Protein Homology CDS 68409 68864 . - 0 ID=cds-WP_043140156.1;Parent=gene-IY40_RS12455;Dbxref=GenBank:WP_043140156.1;Name=WP_043140156.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004936185.1;locus_tag=IY40_RS12455;product=rhodanese-like domain-containing protein;protein_id=WP_043140156.1;transl_table=11 NZ_JPQY01000018.1 RefSeq gene 68958 70391 . + . ID=gene-IY40_RS12460;Name=pdxR;gbkey=Gene;gene=pdxR;gene_biotype=protein_coding;locus_tag=IY40_RS12460;old_locus_tag=IY40_12670 NZ_JPQY01000018.1 Protein Homology CDS 68958 70391 . + 0 ID=cds-WP_200877946.1;Parent=gene-IY40_RS12460;Dbxref=GenBank:WP_200877946.1;Name=WP_200877946.1;Ontology_term=GO:0042823,GO:2000142,GO:0070279;gbkey=CDS;gene=pdxR;go_function=vitamin B6 binding|0070279||IEA;go_process=pyridoxal phosphate biosynthetic process|0042823||IEA,regulation of DNA-templated transcription initiation|2000142||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016926862.1;locus_tag=IY40_RS12460;product=MocR-like pyridoxine biosynthesis transcription factor PdxR;protein_id=WP_200877946.1;transl_table=11 NZ_JPQY01000018.1 RefSeq gene 70419 71315 . - . ID=gene-IY40_RS12465;Name=IY40_RS12465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS12465;old_locus_tag=IY40_12675 NZ_JPQY01000018.1 Protein Homology CDS 70419 71315 . - 0 ID=cds-WP_043140163.1;Parent=gene-IY40_RS12465;Dbxref=GenBank:WP_043140163.1;Name=WP_043140163.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004947424.1;locus_tag=IY40_RS12465;product=endonuclease/exonuclease/phosphatase family protein;protein_id=WP_043140163.1;transl_table=11 NZ_JPQY01000018.1 RefSeq gene 71533 72780 . + . ID=gene-IY40_RS12470;Name=pepT;gbkey=Gene;gene=pepT;gene_biotype=protein_coding;locus_tag=IY40_RS12470;old_locus_tag=IY40_12680 NZ_JPQY01000018.1 Protein Homology CDS 71533 72780 . + 0 ID=cds-WP_043140166.1;Parent=gene-IY40_RS12470;Dbxref=GenBank:WP_043140166.1;Name=WP_043140166.1;Ontology_term=GO:0006508,GO:0008270,GO:0045148;gbkey=CDS;gene=pepT;go_function=zinc ion binding|0008270||IEA,tripeptide aminopeptidase activity|0045148||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004936192.1;locus_tag=IY40_RS12470;product=peptidase T;protein_id=WP_043140166.1;transl_table=11 NZ_JPQY01000018.1 RefSeq gene 72777 73889 . - . ID=gene-IY40_RS12475;Name=IY40_RS12475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS12475;old_locus_tag=IY40_12685 NZ_JPQY01000018.1 Protein Homology CDS 72777 73889 . - 0 ID=cds-WP_043140170.1;Parent=gene-IY40_RS12475;Dbxref=GenBank:WP_043140170.1;Name=WP_043140170.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004936194.1;locus_tag=IY40_RS12475;product=SLC13 family permease;protein_id=WP_043140170.1;transl_table=11 NZ_JPQY01000018.1 RefSeq gene 74044 75075 . + . ID=gene-IY40_RS12480;Name=apbE;gbkey=Gene;gene=apbE;gene_biotype=protein_coding;locus_tag=IY40_RS12480;old_locus_tag=IY40_12690 NZ_JPQY01000018.1 Protein Homology CDS 74044 75075 . + 0 ID=cds-WP_043140173.1;Parent=gene-IY40_RS12480;Dbxref=GenBank:WP_043140173.1;Name=WP_043140173.1;Ontology_term=GO:0017013;gbkey=CDS;gene=apbE;go_process=protein flavinylation|0017013||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015378613.1;locus_tag=IY40_RS12480;product=FAD:protein FMN transferase ApbE;protein_id=WP_043140173.1;transl_table=11 NZ_JPQY01000018.1 RefSeq gene 75127 75348 . - . ID=gene-IY40_RS12485;Name=IY40_RS12485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS12485;old_locus_tag=IY40_12695 NZ_JPQY01000018.1 Protein Homology CDS 75127 75348 . - 0 ID=cds-WP_004936201.1;Parent=gene-IY40_RS12485;Dbxref=GenBank:WP_004936201.1;Name=WP_004936201.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312167.1;locus_tag=IY40_RS12485;product=putative periplasmic lipoprotein;protein_id=WP_004936201.1;transl_table=11 NZ_JPQY01000018.1 RefSeq gene 75561 76781 . - . ID=gene-IY40_RS12490;Name=fabB;gbkey=Gene;gene=fabB;gene_biotype=protein_coding;locus_tag=IY40_RS12490;old_locus_tag=IY40_12700 NZ_JPQY01000018.1 Protein Homology CDS 75561 76781 . - 0 ID=cds-WP_016926857.1;Parent=gene-IY40_RS12490;Dbxref=GenBank:WP_016926857.1;Name=WP_016926857.1;Ontology_term=GO:0006633,GO:0004315;gbkey=CDS;gene=fabB;go_function=3-oxoacyl-[acyl-carrier-protein] synthase activity|0004315||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016926857.1;locus_tag=IY40_RS12490;product=beta-ketoacyl-ACP synthase I;protein_id=WP_016926857.1;transl_table=11 NZ_JPQY01000018.1 RefSeq gene 76952 78973 . + . ID=gene-IY40_RS12495;Name=mnmC;gbkey=Gene;gene=mnmC;gene_biotype=protein_coding;locus_tag=IY40_RS12495;old_locus_tag=IY40_12705 NZ_JPQY01000018.1 Protein Homology CDS 76952 78973 . + 0 ID=cds-WP_043140276.1;Parent=gene-IY40_RS12495;Dbxref=GenBank:WP_043140276.1;Name=WP_043140276.1;gbkey=CDS;gene=mnmC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004947467.1;locus_tag=IY40_RS12495;product=bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC;protein_id=WP_043140276.1;transl_table=11 NZ_JPQY01000018.1 RefSeq gene 79015 79296 . - . ID=gene-IY40_RS12500;Name=IY40_RS12500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS12500;old_locus_tag=IY40_12710 NZ_JPQY01000018.1 Protein Homology CDS 79015 79296 . - 0 ID=cds-WP_016926855.1;Parent=gene-IY40_RS12500;Dbxref=GenBank:WP_016926855.1;Name=WP_016926855.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012146083.1;locus_tag=IY40_RS12500;product=YfcL family protein;protein_id=WP_016926855.1;transl_table=11 NZ_JPQY01000018.1 RefSeq gene 79329 79886 . - . ID=gene-IY40_RS12505;Name=IY40_RS12505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS12505;old_locus_tag=IY40_12715 NZ_JPQY01000018.1 Protein Homology CDS 79329 79886 . - 0 ID=cds-WP_043140178.1;Parent=gene-IY40_RS12505;Dbxref=GenBank:WP_043140178.1;Name=WP_043140178.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019453772.1;locus_tag=IY40_RS12505;product=elongation factor P hydroxylase;protein_id=WP_043140178.1;transl_table=11 NZ_JPQY01000018.1 RefSeq gene 79967 80773 . - . ID=gene-IY40_RS12510;Name=IY40_RS12510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS12510;old_locus_tag=IY40_12720 NZ_JPQY01000018.1 Protein Homology CDS 79967 80773 . - 0 ID=cds-WP_025303718.1;Parent=gene-IY40_RS12510;Dbxref=GenBank:WP_025303718.1;Name=WP_025303718.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016926853.1;locus_tag=IY40_RS12510;product=sulfite exporter TauE/SafE family protein;protein_id=WP_025303718.1;transl_table=11 NZ_JPQY01000018.1 RefSeq gene 80777 81604 . - . ID=gene-IY40_RS12515;Name=mepA;gbkey=Gene;gene=mepA;gene_biotype=protein_coding;locus_tag=IY40_RS12515;old_locus_tag=IY40_12725 NZ_JPQY01000018.1 Protein Homology CDS 80777 81604 . - 0 ID=cds-WP_043140182.1;Parent=gene-IY40_RS12515;Dbxref=GenBank:WP_043140182.1;Name=WP_043140182.1;Ontology_term=GO:0006508,GO:0004252,GO:0030288;gbkey=CDS;gene=mepA;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016674225.1;locus_tag=IY40_RS12515;product=penicillin-insensitive murein endopeptidase;protein_id=WP_043140182.1;transl_table=11 NZ_JPQY01000018.1 RefSeq gene 81610 82695 . - . ID=gene-IY40_RS12520;Name=aroC;gbkey=Gene;gene=aroC;gene_biotype=protein_coding;locus_tag=IY40_RS12520;old_locus_tag=IY40_12730 NZ_JPQY01000018.1 Protein Homology CDS 81610 82695 . - 0 ID=cds-WP_004936219.1;Parent=gene-IY40_RS12520;Dbxref=GenBank:WP_004936219.1;Name=WP_004936219.1;Ontology_term=GO:0009073,GO:0004107;gbkey=CDS;gene=aroC;go_function=chorismate synthase activity|0004107||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209711.1;locus_tag=IY40_RS12520;product=chorismate synthase;protein_id=WP_004936219.1;transl_table=11 NZ_JPQY01000018.1 RefSeq gene 82761 83693 . - . ID=gene-IY40_RS12525;Name=prmB;gbkey=Gene;gene=prmB;gene_biotype=protein_coding;locus_tag=IY40_RS12525;old_locus_tag=IY40_12735 NZ_JPQY01000018.1 Protein Homology CDS 82761 83693 . - 0 ID=cds-WP_025160157.1;Parent=gene-IY40_RS12525;Dbxref=GenBank:WP_025160157.1;Name=WP_025160157.1;Ontology_term=GO:0018364,GO:0042273,GO:0008276,GO:0008757;gbkey=CDS;gene=prmB;go_function=protein methyltransferase activity|0008276||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=peptidyl-glutamine methylation|0018364||IEA,ribosomal large subunit biogenesis|0042273||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006326964.1;locus_tag=IY40_RS12525;product=50S ribosomal protein L3 N(5)-glutamine methyltransferase;protein_id=WP_025160157.1;transl_table=11 NZ_JPQY01000018.1 RefSeq gene 83864 84394 . + . ID=gene-IY40_RS12530;Name=smrB;gbkey=Gene;gene=smrB;gene_biotype=protein_coding;locus_tag=IY40_RS12530;old_locus_tag=IY40_12740 NZ_JPQY01000018.1 Protein Homology CDS 83864 84394 . + 0 ID=cds-WP_043140186.1;Parent=gene-IY40_RS12530;Dbxref=GenBank:WP_043140186.1;Name=WP_043140186.1;gbkey=CDS;gene=smrB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005171938.1;locus_tag=IY40_RS12530;product=endonuclease SmrB;protein_id=WP_043140186.1;transl_table=11 NZ_JPQY01000018.1 RefSeq gene 84464 84946 . - . ID=gene-IY40_RS12535;Name=sixA;gbkey=Gene;gene=sixA;gene_biotype=protein_coding;locus_tag=IY40_RS12535;old_locus_tag=IY40_12745 NZ_JPQY01000018.1 Protein Homology CDS 84464 84946 . - 0 ID=cds-WP_004936230.1;Parent=gene-IY40_RS12535;Dbxref=GenBank:WP_004936230.1;Name=WP_004936230.1;Ontology_term=GO:0036211,GO:0101006,GO:0005737;gbkey=CDS;gene=sixA;go_component=cytoplasm|0005737||IEA;go_function=protein histidine phosphatase activity|0101006||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017893534.1;locus_tag=IY40_RS12535;product=phosphohistidine phosphatase SixA;protein_id=WP_004936230.1;transl_table=11 NZ_JPQY01000018.1 RefSeq gene 85335 87500 . - . ID=gene-IY40_RS12540;Name=fadJ;gbkey=Gene;gene=fadJ;gene_biotype=protein_coding;locus_tag=IY40_RS12540;old_locus_tag=IY40_12750 NZ_JPQY01000018.1 Protein Homology CDS 85335 87500 . - 0 ID=cds-WP_025303721.1;Parent=gene-IY40_RS12540;Dbxref=GenBank:WP_025303721.1;Name=WP_025303721.1;Ontology_term=GO:0009062,GO:0003857,GO:0004300,GO:0008692,GO:0051287;gbkey=CDS;gene=fadJ;go_function=(3S)-3-hydroxyacyl-CoA dehydrogenase (NAD+) activity|0003857||IEA,enoyl-CoA hydratase activity|0004300||IEA,3-hydroxybutyryl-CoA epimerase activity|0008692||IEA,NAD binding|0051287||IEA;go_process=fatty acid catabolic process|0009062||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015378619.1;locus_tag=IY40_RS12540;product=fatty acid oxidation complex subunit alpha FadJ;protein_id=WP_025303721.1;transl_table=11 NZ_JPQY01000018.1 RefSeq gene 87500 88810 . - . ID=gene-IY40_RS12545;Name=fadI;gbkey=Gene;gene=fadI;gene_biotype=protein_coding;locus_tag=IY40_RS12545;old_locus_tag=IY40_12755 NZ_JPQY01000018.1 Protein Homology CDS 87500 88810 . - 0 ID=cds-WP_025303722.1;Parent=gene-IY40_RS12545;Dbxref=GenBank:WP_025303722.1;Name=WP_025303722.1;Ontology_term=GO:0006631,GO:0016042,GO:0003988,GO:0005737;gbkey=CDS;gene=fadI;go_component=cytoplasm|0005737||IEA;go_function=acetyl-CoA C-acyltransferase activity|0003988||IEA;go_process=fatty acid metabolic process|0006631||IEA,lipid catabolic process|0016042||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209704.1;locus_tag=IY40_RS12545;product=acetyl-CoA C-acyltransferase FadI;protein_id=WP_025303722.1;transl_table=11 NZ_JPQY01000018.1 RefSeq gene 89006 89302 . - . ID=gene-IY40_RS12550;Name=IY40_RS12550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS12550;old_locus_tag=IY40_12760 NZ_JPQY01000018.1 Protein Homology CDS 89006 89302 . - 0 ID=cds-WP_072145088.1;Parent=gene-IY40_RS12550;Dbxref=GenBank:WP_072145088.1;Name=WP_072145088.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019453781.1;locus_tag=IY40_RS12550;product=YfcZ/YiiS family protein;protein_id=WP_072145088.1;transl_table=11 NZ_JPQY01000018.1 RefSeq gene 89708 91030 . + . ID=gene-IY40_RS12555;Name=fadL;gbkey=Gene;gene=fadL;gene_biotype=protein_coding;locus_tag=IY40_RS12555;old_locus_tag=IY40_12765 NZ_JPQY01000018.1 Protein Homology CDS 89708 91030 . + 0 ID=cds-WP_004936243.1;Parent=gene-IY40_RS12555;Dbxref=GenBank:WP_004936243.1;Name=WP_004936243.1;gbkey=CDS;gene=fadL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001766332.1;locus_tag=IY40_RS12555;product=long-chain fatty acid transporter FadL;protein_id=WP_004936243.1;transl_table=11 NZ_JPQY01000018.1 RefSeq gene 91147 91905 . - . ID=gene-IY40_RS12560;Name=mlaA;gbkey=Gene;gene=mlaA;gene_biotype=protein_coding;locus_tag=IY40_RS12560;old_locus_tag=IY40_12770 NZ_JPQY01000018.1 Protein Homology CDS 91147 91905 . - 0 ID=cds-WP_025303725.1;Parent=gene-IY40_RS12560;Dbxref=GenBank:WP_025303725.1;Name=WP_025303725.1;Ontology_term=GO:0016020;gbkey=CDS;gene=mlaA;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015365533.1;locus_tag=IY40_RS12560;product=phospholipid-binding lipoprotein MlaA;protein_id=WP_025303725.1;transl_table=11 NZ_JPQY01000018.1 RefSeq gene 91934 93148 . - . ID=gene-IY40_RS12565;Name=ccmI;gbkey=Gene;gene=ccmI;gene_biotype=protein_coding;locus_tag=IY40_RS12565;old_locus_tag=IY40_12775 NZ_JPQY01000018.1 Protein Homology CDS 91934 93148 . - 0 ID=cds-WP_043140192.1;Parent=gene-IY40_RS12565;Dbxref=GenBank:WP_043140192.1;Name=WP_043140192.1;Ontology_term=GO:0017004,GO:0051082;gbkey=CDS;gene=ccmI;go_function=unfolded protein binding|0051082||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004936252.1;locus_tag=IY40_RS12565;product=c-type cytochrome biogenesis protein CcmI;protein_id=WP_043140192.1;transl_table=11 NZ_JPQY01000018.1 RefSeq gene 93148 93615 . - . ID=gene-IY40_RS12570;Name=IY40_RS12570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS12570;old_locus_tag=IY40_12780 NZ_JPQY01000018.1 Protein Homology CDS 93148 93615 . - 0 ID=cds-WP_043140196.1;Parent=gene-IY40_RS12570;Dbxref=GenBank:WP_043140196.1;Name=WP_043140196.1;Ontology_term=GO:0017004,GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002214855.1;locus_tag=IY40_RS12570;product=cytochrome c-type biogenesis protein;protein_id=WP_043140196.1;transl_table=11 NZ_JPQY01000018.1 RefSeq gene 93612 94163 . - . ID=gene-IY40_RS12575;Name=IY40_RS12575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS12575;old_locus_tag=IY40_12785 NZ_JPQY01000018.1 Protein Homology CDS 93612 94163 . - 0 ID=cds-WP_015378623.1;Parent=gene-IY40_RS12575;Dbxref=GenBank:WP_015378623.1;Name=WP_015378623.1;Ontology_term=GO:0017004,GO:0015036,GO:0030288;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=disulfide oxidoreductase activity|0015036||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013813951.1;locus_tag=IY40_RS12575;product=DsbE family thiol:disulfide interchange protein;protein_id=WP_015378623.1;transl_table=11 NZ_JPQY01000018.1 RefSeq gene 94160 96130 . - . ID=gene-IY40_RS12580;Name=IY40_RS12580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS12580;old_locus_tag=IY40_12790 NZ_JPQY01000018.1 Protein Homology CDS 94160 96130 . - 0 ID=cds-WP_025303728.1;Parent=gene-IY40_RS12580;Dbxref=GenBank:WP_025303728.1;Name=WP_025303728.1;Ontology_term=GO:0017004,GO:0015232,GO:0020037,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=heme transmembrane transporter activity|0015232||IEA,heme binding|0020037||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192697.1;locus_tag=IY40_RS12580;product=heme lyase CcmF/NrfE family subunit;protein_id=WP_025303728.1;transl_table=11 NZ_JPQY01000018.1 RefSeq gene 96127 96621 . - . ID=gene-IY40_RS12585;Name=ccmE;gbkey=Gene;gene=ccmE;gene_biotype=protein_coding;locus_tag=IY40_RS12585;old_locus_tag=IY40_12795 NZ_JPQY01000018.1 Protein Homology CDS 96127 96621 . - 0 ID=cds-WP_004936264.1;Parent=gene-IY40_RS12585;Dbxref=GenBank:WP_004936264.1;Name=WP_004936264.1;Ontology_term=GO:0017004,GO:0020037,GO:0005886;gbkey=CDS;gene=ccmE;go_component=plasma membrane|0005886||IEA;go_function=heme binding|0020037||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012146100.1;locus_tag=IY40_RS12585;product=cytochrome c maturation protein CcmE;protein_id=WP_004936264.1;transl_table=11 NZ_JPQY01000018.1 RefSeq gene 96618 96854 . - . ID=gene-IY40_RS12590;Name=ccmD;gbkey=Gene;gene=ccmD;gene_biotype=protein_coding;locus_tag=IY40_RS12590;old_locus_tag=IY40_12800 NZ_JPQY01000018.1 Protein Homology CDS 96618 96854 . - 0 ID=cds-WP_043140202.1;Parent=gene-IY40_RS12590;Dbxref=GenBank:WP_043140202.1;Name=WP_043140202.1;Ontology_term=GO:0015886,GO:0017004,GO:0016020;gbkey=CDS;gene=ccmD;go_component=membrane|0016020||IEA;go_process=heme transport|0015886||IEA,cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013813953.1;locus_tag=IY40_RS12590;product=heme exporter protein CcmD;protein_id=WP_043140202.1;transl_table=11 NZ_JPQY01000018.1 RefSeq gene 96851 97588 . - . ID=gene-IY40_RS12595;Name=IY40_RS12595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS12595;old_locus_tag=IY40_12805 NZ_JPQY01000018.1 Protein Homology CDS 96851 97588 . - 0 ID=cds-WP_025303730.1;Parent=gene-IY40_RS12595;Dbxref=GenBank:WP_025303730.1;Name=WP_025303730.1;Ontology_term=GO:0017004,GO:0015232,GO:0020037,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=heme transmembrane transporter activity|0015232||IEA,heme binding|0020037||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019453789.1;locus_tag=IY40_RS12595;product=heme ABC transporter permease;protein_id=WP_025303730.1;transl_table=11 NZ_JPQY01000018.1 RefSeq gene 97709 98368 . - . ID=gene-IY40_RS12600;Name=ccmB;gbkey=Gene;gene=ccmB;gene_biotype=protein_coding;locus_tag=IY40_RS12600;old_locus_tag=IY40_12810 NZ_JPQY01000018.1 Protein Homology CDS 97709 98368 . - 0 ID=cds-WP_025303731.1;Parent=gene-IY40_RS12600;Dbxref=GenBank:WP_025303731.1;Name=WP_025303731.1;Ontology_term=GO:0015886,GO:0015232;gbkey=CDS;gene=ccmB;go_function=heme transmembrane transporter activity|0015232||IEA;go_process=heme transport|0015886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004708938.1;locus_tag=IY40_RS12600;product=heme exporter protein CcmB;protein_id=WP_025303731.1;transl_table=11 NZ_JPQY01000018.1 RefSeq gene 98368 99000 . - . ID=gene-IY40_RS12605;Name=ccmA;gbkey=Gene;gene=ccmA;gene_biotype=protein_coding;locus_tag=IY40_RS12605;old_locus_tag=IY40_12815 NZ_JPQY01000018.1 Protein Homology CDS 98368 99000 . - 0 ID=cds-WP_015378626.1;Parent=gene-IY40_RS12605;Dbxref=GenBank:WP_015378626.1;Name=WP_015378626.1;Ontology_term=GO:0017004,GO:0005524,GO:0022857;gbkey=CDS;gene=ccmA;go_function=ATP binding|0005524||IEA,transmembrane transporter activity|0022857||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016926838.1;locus_tag=IY40_RS12605;product=cytochrome c biogenesis heme-transporting ATPase CcmA;protein_id=WP_015378626.1;transl_table=11 NZ_JPQY01000018.1 RefSeq gene 99230 100156 . + . ID=gene-IY40_RS12610;Name=IY40_RS12610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS12610;old_locus_tag=IY40_12820 NZ_JPQY01000018.1 Protein Homology CDS 99230 100156 . + 0 ID=cds-WP_043140205.1;Parent=gene-IY40_RS12610;Dbxref=GenBank:WP_043140205.1;Name=WP_043140205.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004936277.1;locus_tag=IY40_RS12610;product=formate/nitrite transporter family protein;protein_id=WP_043140205.1;transl_table=11 NZ_JPQY01000018.1 RefSeq gene 100286 100360 . + . ID=gene-IY40_RS12615;Name=IY40_RS12615;gbkey=Gene;gene_biotype=tRNA;locus_tag=IY40_RS12615;old_locus_tag=IY40_12825 NZ_JPQY01000018.1 tRNAscan-SE tRNA 100286 100360 . + . ID=rna-IY40_RS12615;Parent=gene-IY40_RS12615;anticodon=(pos:100319..100321);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=IY40_RS12615;product=tRNA-Arg NZ_JPQY01000018.1 tRNAscan-SE exon 100286 100360 . + . ID=exon-IY40_RS12615-1;Parent=rna-IY40_RS12615;anticodon=(pos:100319..100321);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=IY40_RS12615;product=tRNA-Arg NZ_JPQY01000018.1 RefSeq gene 100454 101728 . - . ID=gene-IY40_RS12620;Name=IY40_RS12620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS12620;old_locus_tag=IY40_12830 NZ_JPQY01000018.1 Protein Homology CDS 100454 101728 . - 0 ID=cds-WP_235211375.1;Parent=gene-IY40_RS12620;Dbxref=GenBank:WP_235211375.1;Name=WP_235211375.1;Ontology_term=GO:0052689;gbkey=CDS;go_function=carboxylic ester hydrolase activity|0052689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019453793.1;locus_tag=IY40_RS12620;product=lactonase family protein;protein_id=WP_235211375.1;transl_table=11 NZ_JPQY01000018.1 RefSeq gene 101749 102549 . - . ID=gene-IY40_RS12625;Name=IY40_RS12625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS12625;old_locus_tag=IY40_12835 NZ_JPQY01000018.1 Protein Homology CDS 101749 102549 . - 0 ID=cds-WP_025303734.1;Parent=gene-IY40_RS12625;Dbxref=GenBank:WP_025303734.1;Name=WP_025303734.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015378629.1;locus_tag=IY40_RS12625;product=helix-turn-helix domain-containing protein;protein_id=WP_025303734.1;transl_table=11 NZ_JPQY01000018.1 RefSeq gene 103234 103455 . - . ID=gene-IY40_RS12630;Name=IY40_RS12630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS12630;old_locus_tag=IY40_12840 NZ_JPQY01000018.1 Protein Homology CDS 103234 103455 . - 0 ID=cds-WP_043140211.1;Parent=gene-IY40_RS12630;Dbxref=GenBank:WP_043140211.1;Name=WP_043140211.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004936288.1;locus_tag=IY40_RS12630;product=hypothetical protein;protein_id=WP_043140211.1;transl_table=11 NZ_JPQY01000018.1 RefSeq gene 103457 104428 . - . ID=gene-IY40_RS12635;Name=IY40_RS12635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS12635;old_locus_tag=IY40_12845 NZ_JPQY01000018.1 Protein Homology CDS 103457 104428 . - 0 ID=cds-WP_043140216.1;Parent=gene-IY40_RS12635;Dbxref=GenBank:WP_043140216.1;Name=WP_043140216.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015378630.1;locus_tag=IY40_RS12635;product=TIGR04086 family membrane protein;protein_id=WP_043140216.1;transl_table=11 NZ_JPQY01000018.1 RefSeq gene 104657 106153 . + . ID=gene-IY40_RS12640;Name=IY40_RS12640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS12640;old_locus_tag=IY40_12850 NZ_JPQY01000018.1 Protein Homology CDS 104657 106153 . + 0 ID=cds-WP_043140220.1;Parent=gene-IY40_RS12640;Dbxref=GenBank:WP_043140220.1;Name=WP_043140220.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004936294.1;locus_tag=IY40_RS12640;product=helix-turn-helix transcriptional regulator;protein_id=WP_043140220.1;transl_table=11 NZ_JPQY01000018.1 RefSeq gene 106288 106539 . + . ID=gene-IY40_RS12645;Name=IY40_RS12645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS12645;old_locus_tag=IY40_12855 NZ_JPQY01000018.1 Protein Homology CDS 106288 106539 . + 0 ID=cds-WP_025303738.1;Parent=gene-IY40_RS12645;Dbxref=GenBank:WP_025303738.1;Name=WP_025303738.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019453798.1;locus_tag=IY40_RS12645;product=CsbD family protein;protein_id=WP_025303738.1;transl_table=11 NZ_JPQY01000018.1 RefSeq gene 106981 107910 . + . ID=gene-IY40_RS12650;Name=dsdC;gbkey=Gene;gene=dsdC;gene_biotype=protein_coding;locus_tag=IY40_RS12650;old_locus_tag=IY40_12860 NZ_JPQY01000018.1 Protein Homology CDS 106981 107910 . + 0 ID=cds-WP_025303739.1;Parent=gene-IY40_RS12650;Dbxref=GenBank:WP_025303739.1;Name=WP_025303739.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=dsdC;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004936301.1;locus_tag=IY40_RS12650;product=DNA-binding transcriptional regulator DsdC;protein_id=WP_025303739.1;transl_table=11 NZ_JPQY01000018.1 RefSeq gene 107922 108224 . - . ID=gene-IY40_RS12655;Name=IY40_RS12655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS12655;old_locus_tag=IY40_12865 NZ_JPQY01000018.1 Protein Homology CDS 107922 108224 . - 0 ID=cds-WP_043140224.1;Parent=gene-IY40_RS12655;Dbxref=GenBank:WP_043140224.1;Name=WP_043140224.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015378633.1;locus_tag=IY40_RS12655;product=hypothetical protein;protein_id=WP_043140224.1;transl_table=11 NZ_JPQY01000018.1 RefSeq gene 108228 109151 . - . ID=gene-IY40_RS12660;Name=IY40_RS12660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS12660;old_locus_tag=IY40_12870 NZ_JPQY01000018.1 Protein Homology CDS 108228 109151 . - 0 ID=cds-WP_043140280.1;Parent=gene-IY40_RS12660;Dbxref=GenBank:WP_043140280.1;Name=WP_043140280.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006326993.1;locus_tag=IY40_RS12660;product=DMT family transporter;protein_id=WP_043140280.1;transl_table=11 NZ_JPQY01000018.1 RefSeq gene 109198 109488 . - . ID=gene-IY40_RS12665;Name=IY40_RS12665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS12665;old_locus_tag=IY40_12875 NZ_JPQY01000018.1 Protein Homology CDS 109198 109488 . - 0 ID=cds-WP_043140228.1;Parent=gene-IY40_RS12665;Dbxref=GenBank:WP_043140228.1;Name=WP_043140228.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006326994.1;locus_tag=IY40_RS12665;product=hypothetical protein;protein_id=WP_043140228.1;transl_table=11 NZ_JPQY01000018.1 RefSeq gene 109885 111036 . + . ID=gene-IY40_RS12670;Name=IY40_RS12670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS12670;old_locus_tag=IY40_12880 NZ_JPQY01000018.1 Protein Homology CDS 109885 111036 . + 0 ID=cds-WP_043140231.1;Parent=gene-IY40_RS12670;Dbxref=GenBank:WP_043140231.1;Name=WP_043140231.1;Ontology_term=GO:0015288,GO:0009279,GO:0016020;gbkey=CDS;go_component=cell outer membrane|0009279||IEA,membrane|0016020||IEA;go_function=porin activity|0015288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017893547.1;locus_tag=IY40_RS12670;product=porin;protein_id=WP_043140231.1;transl_table=11 NZ_JPQY01000018.1 RefSeq gene 111095 112183 . - . ID=gene-IY40_RS12675;Name=mltB;gbkey=Gene;gene=mltB;gene_biotype=protein_coding;locus_tag=IY40_RS12675;old_locus_tag=IY40_12885 NZ_JPQY01000018.1 Protein Homology CDS 111095 112183 . - 0 ID=cds-WP_043140236.1;Parent=gene-IY40_RS12675;Dbxref=GenBank:WP_043140236.1;Name=WP_043140236.1;gbkey=CDS;gene=mltB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004936318.1;locus_tag=IY40_RS12675;product=lytic murein transglycosylase B;protein_id=WP_043140236.1;transl_table=11 NZ_JPQY01000018.1 RefSeq gene 112467 112919 . + . ID=gene-IY40_RS12680;Name=IY40_RS12680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS12680;old_locus_tag=IY40_12890 NZ_JPQY01000018.1 Protein Homology CDS 112467 112919 . + 0 ID=cds-WP_043140239.1;Parent=gene-IY40_RS12680;Dbxref=GenBank:WP_043140239.1;Name=WP_043140239.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004936320.1;locus_tag=IY40_RS12680;product=DUF805 domain-containing protein;protein_id=WP_043140239.1;transl_table=11 NZ_JPQY01000018.1 RefSeq gene 113003 113440 . + . ID=gene-IY40_RS12685;Name=IY40_RS12685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS12685;old_locus_tag=IY40_12895 NZ_JPQY01000018.1 Protein Homology CDS 113003 113440 . + 0 ID=cds-WP_043140242.1;Parent=gene-IY40_RS12685;Dbxref=GenBank:WP_043140242.1;Name=WP_043140242.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016926820.1;locus_tag=IY40_RS12685;product=type II toxin-antitoxin system HicB family antitoxin;protein_id=WP_043140242.1;transl_table=11 NZ_JPQY01000018.1 RefSeq gene 113999 114073 . + . ID=gene-IY40_RS25975;Name=ypdK;gbkey=Gene;gene=ypdK;gene_biotype=protein_coding;locus_tag=IY40_RS25975 NZ_JPQY01000018.1 Protein Homology CDS 113999 114073 . + 0 ID=cds-WP_099782600.1;Parent=gene-IY40_RS25975;Dbxref=GenBank:WP_099782600.1;Name=WP_099782600.1;Ontology_term=GO:0016020;gbkey=CDS;gene=ypdK;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086012885.1;locus_tag=IY40_RS25975;product=membrane protein YpdK;protein_id=WP_099782600.1;transl_table=11 NZ_JPQY01000018.1 RefSeq gene 114140 114664 . - . ID=gene-IY40_RS12690;Name=IY40_RS12690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS12690;old_locus_tag=IY40_12900 NZ_JPQY01000018.1 Protein Homology CDS 114140 114664 . - 0 ID=cds-WP_043140246.1;Parent=gene-IY40_RS12690;Dbxref=GenBank:WP_043140246.1;Name=WP_043140246.1;Ontology_term=GO:0022904,GO:0009055,GO:0020037,GO:0046872,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA;go_process=respiratory electron transport chain|0022904||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004936326.1;locus_tag=IY40_RS12690;product=cytochrome b;protein_id=WP_043140246.1;transl_table=11 NZ_JPQY01000018.1 RefSeq gene 114775 116004 . - . ID=gene-IY40_RS12695;Name=alaC;gbkey=Gene;gene=alaC;gene_biotype=protein_coding;locus_tag=IY40_RS12695;old_locus_tag=IY40_12905 NZ_JPQY01000018.1 Protein Homology CDS 114775 116004 . - 0 ID=cds-WP_016926818.1;Parent=gene-IY40_RS12695;Dbxref=GenBank:WP_016926818.1;Name=WP_016926818.1;Ontology_term=GO:0009058,GO:0003824,GO:0030170;gbkey=CDS;gene=alaC;go_function=catalytic activity|0003824||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016926818.1;locus_tag=IY40_RS12695;product=alanine transaminase;protein_id=WP_016926818.1;transl_table=11 NZ_JPQY01000018.1 RefSeq gene 116124 116663 . - . ID=gene-IY40_RS12700;Name=IY40_RS12700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS12700;old_locus_tag=IY40_12910 NZ_JPQY01000018.1 Protein Homology CDS 116124 116663 . - 0 ID=cds-WP_043140251.1;Parent=gene-IY40_RS12700;Dbxref=GenBank:WP_043140251.1;Name=WP_043140251.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004947559.1;locus_tag=IY40_RS12700;product=GNAT family N-acetyltransferase;protein_id=WP_043140251.1;transl_table=11 NZ_JPQY01000018.1 RefSeq gene 116832 118076 . + . ID=gene-IY40_RS12705;Name=IY40_RS12705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS12705;old_locus_tag=IY40_12915 NZ_JPQY01000018.1 Protein Homology CDS 116832 118076 . + 0 ID=cds-WP_042785138.1;Parent=gene-IY40_RS12705;Dbxref=GenBank:WP_042785138.1;Name=WP_042785138.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015378647.1;locus_tag=IY40_RS12705;product=DUF1479 domain-containing protein;protein_id=WP_042785138.1;transl_table=11 NZ_JPQY01000018.1 RefSeq gene 118169 119860 . + . ID=gene-IY40_RS12710;Name=IY40_RS12710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS12710;old_locus_tag=IY40_12920 NZ_JPQY01000018.1 Protein Homology CDS 118169 119860 . + 0 ID=cds-WP_043140258.1;Parent=gene-IY40_RS12710;Dbxref=GenBank:WP_043140258.1;Name=WP_043140258.1;Ontology_term=GO:0000160,GO:0071555,GO:0000155,GO:0004673,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016926815.1;locus_tag=IY40_RS12710;product=sensor histidine kinase;protein_id=WP_043140258.1;transl_table=11 NZ_JPQY01000018.1 RefSeq gene 119857 120591 . + . ID=gene-IY40_RS12715;Name=IY40_RS12715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS12715;old_locus_tag=IY40_12925 NZ_JPQY01000018.1 Protein Homology CDS 119857 120591 . + 0 ID=cds-WP_025303751.1;Parent=gene-IY40_RS12715;Dbxref=GenBank:WP_025303751.1;Name=WP_025303751.1;Ontology_term=GO:0000160,GO:0000156,GO:0003677;gbkey=CDS;go_function=phosphorelay response regulator activity|0000156||IEA,DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013813970.1;locus_tag=IY40_RS12715;product=LytR/AlgR family response regulator transcription factor;protein_id=WP_025303751.1;transl_table=11 NZ_JPQY01000018.1 RefSeq gene 120596 120922 . - . ID=gene-IY40_RS12720;Name=IY40_RS12720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS12720;old_locus_tag=IY40_12930 NZ_JPQY01000018.1 Protein Homology CDS 120596 120922 . - 0 ID=cds-WP_043140261.1;Parent=gene-IY40_RS12720;Dbxref=GenBank:WP_043140261.1;Name=WP_043140261.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004936345.1;locus_tag=IY40_RS12720;product=DUF2502 domain-containing protein;protein_id=WP_043140261.1;transl_table=11 NZ_JPQY01000018.1 RefSeq gene 121319 122548 . + . ID=gene-IY40_RS12725;Name=IY40_RS12725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS12725;old_locus_tag=IY40_12935 NZ_JPQY01000018.1 Protein Homology CDS 121319 122548 . + 0 ID=cds-WP_043140263.1;Parent=gene-IY40_RS12725;Dbxref=GenBank:WP_043140263.1;Name=WP_043140263.1;Ontology_term=GO:0015129;gbkey=CDS;go_function=lactate transmembrane transporter activity|0015129||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016926813.1;locus_tag=IY40_RS12725;product=L-lactate MFS transporter;protein_id=WP_043140263.1;transl_table=11 NZ_JPQY01000018.1 RefSeq gene 122619 123581 . - . ID=gene-IY40_RS12730;Name=glk;gbkey=Gene;gene=glk;gene_biotype=protein_coding;locus_tag=IY40_RS12730;old_locus_tag=IY40_12940 NZ_JPQY01000018.1 Protein Homology CDS 122619 123581 . - 0 ID=cds-WP_025303754.1;Parent=gene-IY40_RS12730;Dbxref=GenBank:WP_025303754.1;Name=WP_025303754.1;Ontology_term=GO:0006096,GO:0051156,GO:0004340,GO:0005524,GO:0005536;gbkey=CDS;gene=glk;go_function=glucokinase activity|0004340||IEA,ATP binding|0005524||IEA,D-glucose binding|0005536||IEA;go_process=glycolytic process|0006096||IEA,glucose 6-phosphate metabolic process|0051156||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006327017.1;locus_tag=IY40_RS12730;product=glucokinase;protein_id=WP_025303754.1;transl_table=11 NZ_JPQY01000018.1 RefSeq gene 123892 125139 . + . ID=gene-IY40_RS12735;Name=IY40_RS12735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS12735;old_locus_tag=IY40_12945 NZ_JPQY01000018.1 Protein Homology CDS 123892 125139 . + 0 ID=cds-WP_025303755.1;Parent=gene-IY40_RS12735;Dbxref=GenBank:WP_025303755.1;Name=WP_025303755.1;Ontology_term=GO:0005247;gbkey=CDS;go_function=voltage-gated chloride channel activity|0005247||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016926811.1;locus_tag=IY40_RS12735;product=ion channel protein;protein_id=WP_025303755.1;transl_table=11 NZ_JPQY01000018.1 RefSeq gene 125136 125828 . - . ID=gene-IY40_RS12740;Name=IY40_RS12740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS12740;old_locus_tag=IY40_12950 NZ_JPQY01000018.1 Protein Homology CDS 125136 125828 . - 0 ID=cds-WP_025303756.1;Parent=gene-IY40_RS12740;Dbxref=GenBank:WP_025303756.1;Name=WP_025303756.1;Ontology_term=GO:0047661;gbkey=CDS;go_function=amino-acid racemase activity|0047661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009637443.1;locus_tag=IY40_RS12740;product=aspartate/glutamate racemase family protein;protein_id=WP_025303756.1;transl_table=11 NZ_JPQY01000018.1 RefSeq gene 125895 126347 . - . ID=gene-IY40_RS12745;Name=IY40_RS12745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS12745;old_locus_tag=IY40_12955 NZ_JPQY01000018.1 Protein Homology CDS 125895 126347 . - 0 ID=cds-WP_025303757.1;Parent=gene-IY40_RS12745;Dbxref=GenBank:WP_025303757.1;Name=WP_025303757.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019453822.1;locus_tag=IY40_RS12745;product=multidrug/biocide efflux PACE transporter;protein_id=WP_025303757.1;transl_table=11 NZ_JPQY01000018.1 RefSeq gene 126444 127313 . + . ID=gene-IY40_RS12750;Name=IY40_RS12750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS12750;old_locus_tag=IY40_12960 NZ_JPQY01000018.1 Protein Homology CDS 126444 127313 . + 0 ID=cds-WP_025303758.1;Parent=gene-IY40_RS12750;Dbxref=GenBank:WP_025303758.1;Name=WP_025303758.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004936358.1;locus_tag=IY40_RS12750;product=LysR family transcriptional regulator;protein_id=WP_025303758.1;transl_table=11 NZ_JPQY01000018.1 RefSeq gene 127310 128971 . - . ID=gene-IY40_RS12755;Name=IY40_RS12755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS12755;old_locus_tag=IY40_12965 NZ_JPQY01000018.1 Protein Homology CDS 127310 128971 . - 0 ID=cds-WP_043140285.1;Parent=gene-IY40_RS12755;Dbxref=GenBank:WP_043140285.1;Name=WP_043140285.1;Ontology_term=GO:0016831,GO:0030976,GO:0046872;gbkey=CDS;go_function=carboxy-lyase activity|0016831||IEA,thiamine pyrophosphate binding|0030976||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006327025.1;locus_tag=IY40_RS12755;product=alpha-keto acid decarboxylase family protein;protein_id=WP_043140285.1;transl_table=11 NZ_JPQY01000018.1 RefSeq gene 129160 130149 . + . ID=gene-IY40_RS12760;Name=mgrA;gbkey=Gene;gene=mgrA;gene_biotype=protein_coding;locus_tag=IY40_RS12760;old_locus_tag=IY40_12970 NZ_JPQY01000018.1 Protein Homology CDS 129160 130149 . + 0 ID=cds-WP_043140266.1;Parent=gene-IY40_RS12760;Dbxref=GenBank:WP_043140266.1;Name=WP_043140266.1;Ontology_term=GO:0047834;gbkey=CDS;gene=mgrA;go_function=D-threo-aldose 1-dehydrogenase activity|0047834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004947593.1;locus_tag=IY40_RS12760;product=L-glyceraldehyde 3-phosphate reductase;protein_id=WP_043140266.1;transl_table=11 NZ_JPQY01000018.1 RefSeq gene 130373 130783 . + . ID=gene-IY40_RS12765;Name=IY40_RS12765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS12765 NZ_JPQY01000018.1 Protein Homology CDS 130373 130783 . + 0 ID=cds-WP_025303761.1;Parent=gene-IY40_RS12765;Dbxref=GenBank:WP_025303761.1;Name=WP_025303761.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016926805.1;locus_tag=IY40_RS12765;product=DUF2502 domain-containing protein;protein_id=WP_025303761.1;transl_table=11 NZ_JPQY01000018.1 RefSeq gene 130825 131914 . - . ID=gene-IY40_RS12770;Name=IY40_RS12770;end_range=131914,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS12770;old_locus_tag=IY40_12980;partial=true NZ_JPQY01000018.1 Protein Homology CDS 130825 131914 . - 1 ID=cds-WP_043140268.1;Parent=gene-IY40_RS12770;Dbxref=GenBank:WP_043140268.1;Name=WP_043140268.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;end_range=131914,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000131735.1;locus_tag=IY40_RS12770;partial=true;product=Nramp family divalent metal transporter;protein_id=WP_043140268.1;transl_table=11 ##sequence-region NZ_JPQY01000019.1 1 106079 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=615 NZ_JPQY01000019.1 RefSeq region 1 106079 . + . ID=NZ_JPQY01000019.1:1..106079;Dbxref=taxon:615;collected-by=Mahloro H. Serepa%3B Vincent M. Gray;collection-date=2013-04-11;country=South Africa: North West Province;gbkey=Src;genome=genomic;identified-by=Mahloro H. Serepa%3B Vincent M. Gray;isolation-source=entomopathogenic nematode Oscheius sp. MCB living in soil;mol_type=genomic DNA;nat-host=Oscheius sp. MCB;strain=MCB NZ_JPQY01000019.1 RefSeq gene 399 1985 . - . ID=gene-IY40_RS12775;Name=IY40_RS12775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS12775;old_locus_tag=IY40_12990 NZ_JPQY01000019.1 Protein Homology CDS 399 1985 . - 0 ID=cds-WP_043140468.1;Parent=gene-IY40_RS12775;Dbxref=GenBank:WP_043140468.1;Name=WP_043140468.1;Ontology_term=GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016926798.1;locus_tag=IY40_RS12775;product=ABC transporter substrate-binding protein;protein_id=WP_043140468.1;transl_table=11 NZ_JPQY01000019.1 RefSeq gene 2129 3814 . - . ID=gene-IY40_RS12780;Name=alsS;gbkey=Gene;gene=alsS;gene_biotype=protein_coding;locus_tag=IY40_RS12780;old_locus_tag=IY40_12995 NZ_JPQY01000019.1 Protein Homology CDS 2129 3814 . - 0 ID=cds-WP_043140308.1;Parent=gene-IY40_RS12780;Dbxref=GenBank:WP_043140308.1;Name=WP_043140308.1;Ontology_term=GO:0034077,GO:0000287,GO:0003984,GO:0030976;gbkey=CDS;gene=alsS;go_function=magnesium ion binding|0000287||IEA,acetolactate synthase activity|0003984||IEA,thiamine pyrophosphate binding|0030976||IEA;go_process=butanediol metabolic process|0034077||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012146145.1;locus_tag=IY40_RS12780;product=acetolactate synthase AlsS;protein_id=WP_043140308.1;transl_table=11 NZ_JPQY01000019.1 RefSeq gene 3847 4626 . - . ID=gene-IY40_RS12785;Name=budA;gbkey=Gene;gene=budA;gene_biotype=protein_coding;locus_tag=IY40_RS12785;old_locus_tag=IY40_13000 NZ_JPQY01000019.1 Protein Homology CDS 3847 4626 . - 0 ID=cds-WP_043140472.1;Parent=gene-IY40_RS12785;Dbxref=GenBank:WP_043140472.1;Name=WP_043140472.1;Ontology_term=GO:0045151,GO:0047605;gbkey=CDS;gene=budA;go_function=acetolactate decarboxylase activity|0047605||IEA;go_process=acetoin biosynthetic process|0045151||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004947651.1;locus_tag=IY40_RS12785;product=acetolactate decarboxylase;protein_id=WP_043140472.1;transl_table=11 NZ_JPQY01000019.1 RefSeq gene 5077 5979 . + . ID=gene-IY40_RS12790;Name=IY40_RS12790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS12790;old_locus_tag=IY40_13005 NZ_JPQY01000019.1 Protein Homology CDS 5077 5979 . + 0 ID=cds-WP_043140312.1;Parent=gene-IY40_RS12790;Dbxref=GenBank:WP_043140312.1;Name=WP_043140312.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016926796.1;locus_tag=IY40_RS12790;product=LysR family transcriptional regulator;protein_id=WP_043140312.1;transl_table=11 NZ_JPQY01000019.1 RefSeq gene 5958 6749 . - . ID=gene-IY40_RS12795;Name=eutC;gbkey=Gene;gene=eutC;gene_biotype=protein_coding;locus_tag=IY40_RS12795;old_locus_tag=IY40_13010 NZ_JPQY01000019.1 Protein Homology CDS 5958 6749 . - 0 ID=cds-WP_043140316.1;Parent=gene-IY40_RS12795;Dbxref=GenBank:WP_043140316.1;Name=WP_043140316.1;Ontology_term=GO:0006520,GO:0008851;gbkey=CDS;gene=eutC;go_function=ethanolamine ammonia-lyase activity|0008851||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019453837.1;locus_tag=IY40_RS12795;product=ethanolamine ammonia-lyase subunit EutC;protein_id=WP_043140316.1;transl_table=11 NZ_JPQY01000019.1 RefSeq gene 6746 8131 . - . ID=gene-IY40_RS12800;Name=IY40_RS12800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS12800;old_locus_tag=IY40_13015 NZ_JPQY01000019.1 Protein Homology CDS 6746 8131 . - 0 ID=cds-WP_043140320.1;Parent=gene-IY40_RS12800;Dbxref=GenBank:WP_043140320.1;Name=WP_043140320.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015378664.1;locus_tag=IY40_RS12800;product=ethanolamine ammonia-lyase subunit EutB;protein_id=WP_043140320.1;transl_table=11 NZ_JPQY01000019.1 RefSeq gene 8291 8839 . + . ID=gene-IY40_RS12805;Name=IY40_RS12805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS12805;old_locus_tag=IY40_13020 NZ_JPQY01000019.1 Protein Homology CDS 8291 8839 . + 0 ID=cds-WP_043140323.1;Parent=gene-IY40_RS12805;Dbxref=GenBank:WP_043140323.1;Name=WP_043140323.1;Ontology_term=GO:0000166,GO:0016779,GO:0046872;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,nucleotidyltransferase activity|0016779||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015378665.1;locus_tag=IY40_RS12805;product=nucleotidyltransferase family protein;protein_id=WP_043140323.1;transl_table=11 NZ_JPQY01000019.1 RefSeq gene 8892 9359 . + . ID=gene-IY40_RS12810;Name=IY40_RS12810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS12810;old_locus_tag=IY40_13025 NZ_JPQY01000019.1 Protein Homology CDS 8892 9359 . + 0 ID=cds-WP_043140327.1;Parent=gene-IY40_RS12810;Dbxref=GenBank:WP_043140327.1;Name=WP_043140327.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004936433.1;locus_tag=IY40_RS12810;product=FlxA-like family protein;protein_id=WP_043140327.1;transl_table=11 NZ_JPQY01000019.1 RefSeq gene 9361 10281 . - . ID=gene-IY40_RS12815;Name=IY40_RS12815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS12815;old_locus_tag=IY40_13030 NZ_JPQY01000019.1 Protein Homology CDS 9361 10281 . - 0 ID=cds-WP_043140331.1;Parent=gene-IY40_RS12815;Dbxref=GenBank:WP_043140331.1;Name=WP_043140331.1;Ontology_term=GO:0003677,GO:0003700,GO:0005829;gbkey=CDS;go_component=cytosol|0005829||IEA;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013814001.1;locus_tag=IY40_RS12815;product=LysR family transcriptional regulator;protein_id=WP_043140331.1;transl_table=11 NZ_JPQY01000019.1 RefSeq gene 10378 11376 . + . ID=gene-IY40_RS12820;Name=IY40_RS12820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS12820;old_locus_tag=IY40_13035 NZ_JPQY01000019.1 Protein Homology CDS 10378 11376 . + 0 ID=cds-WP_043140334.1;Parent=gene-IY40_RS12820;Dbxref=GenBank:WP_043140334.1;Name=WP_043140334.1;Ontology_term=GO:0006810,GO:0015293,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019453842.1;locus_tag=IY40_RS12820;product=bile acid:sodium symporter family protein;protein_id=WP_043140334.1;transl_table=11 NZ_JPQY01000019.1 RefSeq gene 11404 11619 . - . ID=gene-IY40_RS12825;Name=IY40_RS12825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS12825;old_locus_tag=IY40_13040 NZ_JPQY01000019.1 Protein Homology CDS 11404 11619 . - 0 ID=cds-WP_004936441.1;Parent=gene-IY40_RS12825;Dbxref=GenBank:WP_004936441.1;Name=WP_004936441.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012146156.1;locus_tag=IY40_RS12825;product=DUF3820 family protein;protein_id=WP_004936441.1;transl_table=11 NZ_JPQY01000019.1 RefSeq gene 11619 13640 . - . ID=gene-IY40_RS12830;Name=ligA;gbkey=Gene;gene=ligA;gene_biotype=protein_coding;locus_tag=IY40_RS12830;old_locus_tag=IY40_13045 NZ_JPQY01000019.1 Protein Homology CDS 11619 13640 . - 0 ID=cds-WP_025303779.1;Parent=gene-IY40_RS12830;Dbxref=GenBank:WP_025303779.1;Name=WP_025303779.1;Ontology_term=GO:0006260,GO:0006281,GO:0003677,GO:0003911;gbkey=CDS;gene=ligA;go_function=DNA binding|0003677||IEA,DNA ligase (NAD+) activity|0003911||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015689494.1;locus_tag=IY40_RS12830;product=NAD-dependent DNA ligase LigA;protein_id=WP_025303779.1;transl_table=11 NZ_JPQY01000019.1 RefSeq gene 13720 14736 . - . ID=gene-IY40_RS12835;Name=zipA;gbkey=Gene;gene=zipA;gene_biotype=protein_coding;locus_tag=IY40_RS12835;old_locus_tag=IY40_13050 NZ_JPQY01000019.1 Protein Homology CDS 13720 14736 . - 0 ID=cds-WP_043140339.1;Parent=gene-IY40_RS12835;Dbxref=GenBank:WP_043140339.1;Name=WP_043140339.1;Ontology_term=GO:0000917,GO:0005515,GO:0016020;gbkey=CDS;gene=zipA;go_component=membrane|0016020||IEA;go_function=protein binding|0005515||IEA;go_process=division septum assembly|0000917||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012146158.1;locus_tag=IY40_RS12835;product=cell division protein ZipA;protein_id=WP_043140339.1;transl_table=11 NZ_JPQY01000019.1 RefSeq gene 14958 15716 . + . ID=gene-IY40_RS12840;Name=cysZ;gbkey=Gene;gene=cysZ;gene_biotype=protein_coding;locus_tag=IY40_RS12840;old_locus_tag=IY40_13055 NZ_JPQY01000019.1 Protein Homology CDS 14958 15716 . + 0 ID=cds-WP_025303781.1;Parent=gene-IY40_RS12840;Dbxref=GenBank:WP_025303781.1;Name=WP_025303781.1;Ontology_term=GO:0000103,GO:0015116,GO:0005886;gbkey=CDS;gene=cysZ;go_component=plasma membrane|0005886||IEA;go_function=sulfate transmembrane transporter activity|0015116||IEA;go_process=sulfate assimilation|0000103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004936451.1;locus_tag=IY40_RS12840;product=sulfate transporter CysZ;protein_id=WP_025303781.1;transl_table=11 NZ_JPQY01000019.1 RefSeq gene 15902 16870 . + . ID=gene-IY40_RS12845;Name=cysK;gbkey=Gene;gene=cysK;gene_biotype=protein_coding;locus_tag=IY40_RS12845;old_locus_tag=IY40_13060 NZ_JPQY01000019.1 Protein Homology CDS 15902 16870 . + 0 ID=cds-WP_004936453.1;Parent=gene-IY40_RS12845;Dbxref=GenBank:WP_004936453.1;Name=WP_004936453.1;Ontology_term=GO:0006535,GO:0004124;gbkey=CDS;gene=cysK;go_function=cysteine synthase activity|0004124||IEA;go_process=cysteine biosynthetic process from serine|0006535||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000034402.1;locus_tag=IY40_RS12845;product=cysteine synthase A;protein_id=WP_004936453.1;transl_table=11 NZ_JPQY01000019.1 RefSeq gene 17270 17527 . + . ID=gene-IY40_RS12850;Name=ptsH;gbkey=Gene;gene=ptsH;gene_biotype=protein_coding;locus_tag=IY40_RS12850;old_locus_tag=IY40_13065 NZ_JPQY01000019.1 Protein Homology CDS 17270 17527 . + 0 ID=cds-WP_004936458.1;Parent=gene-IY40_RS12850;Dbxref=GenBank:WP_004936458.1;Name=WP_004936458.1;gbkey=CDS;gene=ptsH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003038086.1;locus_tag=IY40_RS12850;product=phosphocarrier protein Hpr;protein_id=WP_004936458.1;transl_table=11 NZ_JPQY01000019.1 RefSeq gene 17574 19301 . + . ID=gene-IY40_RS12855;Name=ptsI;gbkey=Gene;gene=ptsI;gene_biotype=protein_coding;locus_tag=IY40_RS12855;old_locus_tag=IY40_13070 NZ_JPQY01000019.1 Protein Homology CDS 17574 19301 . + 0 ID=cds-WP_025303782.1;Parent=gene-IY40_RS12855;Dbxref=GenBank:WP_025303782.1;Name=WP_025303782.1;gbkey=CDS;gene=ptsI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416911.1;locus_tag=IY40_RS12855;product=phosphoenolpyruvate-protein phosphotransferase PtsI;protein_id=WP_025303782.1;transl_table=11 NZ_JPQY01000019.1 RefSeq gene 19351 19860 . + . ID=gene-IY40_RS12860;Name=crr;gbkey=Gene;gene=crr;gene_biotype=protein_coding;locus_tag=IY40_RS12860;old_locus_tag=IY40_13075 NZ_JPQY01000019.1 Protein Homology CDS 19351 19860 . + 0 ID=cds-WP_004936467.1;Parent=gene-IY40_RS12860;Dbxref=GenBank:WP_004936467.1;Name=WP_004936467.1;Ontology_term=GO:0009401;gbkey=CDS;gene=crr;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015833547.1;locus_tag=IY40_RS12860;product=PTS glucose transporter subunit IIA;protein_id=WP_004936467.1;transl_table=11 NZ_JPQY01000019.1 RefSeq gene 19936 21261 . - . ID=gene-IY40_RS12865;Name=IY40_RS12865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS12865;old_locus_tag=IY40_13080 NZ_JPQY01000019.1 Protein Homology CDS 19936 21261 . - 0 ID=cds-WP_043140342.1;Parent=gene-IY40_RS12865;Dbxref=GenBank:WP_043140342.1;Name=WP_043140342.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004936471.1;locus_tag=IY40_RS12865;product=ATP-binding protein;protein_id=WP_043140342.1;transl_table=11 NZ_JPQY01000019.1 RefSeq gene 21268 21948 . - . ID=gene-IY40_RS12870;Name=IY40_RS12870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS12870;old_locus_tag=IY40_13085 NZ_JPQY01000019.1 Protein Homology CDS 21268 21948 . - 0 ID=cds-WP_043140344.1;Parent=gene-IY40_RS12870;Dbxref=GenBank:WP_043140344.1;Name=WP_043140344.1;Ontology_term=GO:0000160,GO:0006355,GO:0000156,GO:0003677;gbkey=CDS;go_function=phosphorelay response regulator activity|0000156||IEA,DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012104853.1;locus_tag=IY40_RS12870;product=response regulator transcription factor;protein_id=WP_043140344.1;transl_table=11 NZ_JPQY01000019.1 RefSeq gene 22201 23082 . - . ID=gene-IY40_RS12875;Name=cysM;gbkey=Gene;gene=cysM;gene_biotype=protein_coding;locus_tag=IY40_RS12875;old_locus_tag=IY40_13090 NZ_JPQY01000019.1 Protein Homology CDS 22201 23082 . - 0 ID=cds-WP_025303785.1;Parent=gene-IY40_RS12875;Dbxref=GenBank:WP_025303785.1;Name=WP_025303785.1;Ontology_term=GO:0006535,GO:0004124;gbkey=CDS;gene=cysM;go_function=cysteine synthase activity|0004124||IEA;go_process=cysteine biosynthetic process from serine|0006535||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019081737.1;locus_tag=IY40_RS12875;product=cysteine synthase CysM;protein_id=WP_025303785.1;transl_table=11 NZ_JPQY01000019.1 RefSeq gene 23164 24252 . - . ID=gene-IY40_RS12880;Name=cysA;gbkey=Gene;gene=cysA;gene_biotype=protein_coding;locus_tag=IY40_RS12880;old_locus_tag=IY40_13095 NZ_JPQY01000019.1 Protein Homology CDS 23164 24252 . - 0 ID=cds-WP_025303786.1;Parent=gene-IY40_RS12880;Dbxref=GenBank:WP_025303786.1;Name=WP_025303786.1;Ontology_term=GO:1902358,GO:0005524,GO:0015419,GO:0016020,GO:0043190;gbkey=CDS;gene=cysA;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ABC-type sulfate transporter activity|0015419||IEA;go_process=sulfate transmembrane transport|1902358||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019081738.1;locus_tag=IY40_RS12880;product=sulfate/thiosulfate ABC transporter ATP-binding protein CysA;protein_id=WP_025303786.1;transl_table=11 NZ_JPQY01000019.1 RefSeq gene 24242 25117 . - . ID=gene-IY40_RS12885;Name=cysW;gbkey=Gene;gene=cysW;gene_biotype=protein_coding;locus_tag=IY40_RS12885;old_locus_tag=IY40_13100 NZ_JPQY01000019.1 Protein Homology CDS 24242 25117 . - 0 ID=cds-WP_025303787.1;Parent=gene-IY40_RS12885;Dbxref=GenBank:WP_025303787.1;Name=WP_025303787.1;Ontology_term=GO:0055085,GO:1902358,GO:0015419,GO:0016020;gbkey=CDS;gene=cysW;go_component=membrane|0016020||IEA;go_function=ABC-type sulfate transporter activity|0015419||IEA;go_process=transmembrane transport|0055085||IEA,sulfate transmembrane transport|1902358||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002231045.1;locus_tag=IY40_RS12885;product=sulfate/thiosulfate ABC transporter permease CysW;protein_id=WP_025303787.1;transl_table=11 NZ_JPQY01000019.1 RefSeq gene 25117 25956 . - . ID=gene-IY40_RS12890;Name=cysT;gbkey=Gene;gene=cysT;gene_biotype=protein_coding;locus_tag=IY40_RS12890;old_locus_tag=IY40_13105 NZ_JPQY01000019.1 Protein Homology CDS 25117 25956 . - 0 ID=cds-WP_033652561.1;Parent=gene-IY40_RS12890;Dbxref=GenBank:WP_033652561.1;Name=WP_033652561.1;Ontology_term=GO:0055085,GO:1902358,GO:0015419,GO:0016020;gbkey=CDS;gene=cysT;go_component=membrane|0016020||IEA;go_function=ABC-type sulfate transporter activity|0015419||IEA;go_process=transmembrane transport|0055085||IEA,sulfate transmembrane transport|1902358||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019453852.1;locus_tag=IY40_RS12890;product=sulfate/thiosulfate ABC transporter permease CysT;protein_id=WP_033652561.1;transl_table=11 NZ_JPQY01000019.1 RefSeq gene 25957 26979 . - . ID=gene-IY40_RS12895;Name=IY40_RS12895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS12895;old_locus_tag=IY40_13110 NZ_JPQY01000019.1 Protein Homology CDS 25957 26979 . - 0 ID=cds-WP_033652562.1;Parent=gene-IY40_RS12895;Dbxref=GenBank:WP_033652562.1;Name=WP_033652562.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004707715.1;locus_tag=IY40_RS12895;product=sulfate ABC transporter substrate-binding protein;protein_id=WP_033652562.1;transl_table=11 NZ_JPQY01000019.1 RefSeq gene 27181 28080 . - . ID=gene-IY40_RS12900;Name=IY40_RS12900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS12900;old_locus_tag=IY40_13115 NZ_JPQY01000019.1 Protein Homology CDS 27181 28080 . - 0 ID=cds-WP_043140353.1;Parent=gene-IY40_RS12900;Dbxref=GenBank:WP_043140353.1;Name=WP_043140353.1;Ontology_term=GO:0004601,GO:0020037;gbkey=CDS;go_function=peroxidase activity|0004601||IEA,heme binding|0020037||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012229799.1;locus_tag=IY40_RS12900;product=Dyp-type peroxidase;protein_id=WP_043140353.1;transl_table=11 NZ_JPQY01000019.1 RefSeq gene 28263 28850 . - . ID=gene-IY40_RS12905;Name=IY40_RS12905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS12905;old_locus_tag=IY40_13120 NZ_JPQY01000019.1 Protein Homology CDS 28263 28850 . - 0 ID=cds-WP_004936494.1;Parent=gene-IY40_RS12905;Dbxref=GenBank:WP_004936494.1;Name=WP_004936494.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004936494.1;locus_tag=IY40_RS12905;product=RpoE-regulated lipoprotein;protein_id=WP_004936494.1;transl_table=11 NZ_JPQY01000019.1 RefSeq gene 29007 29471 . - . ID=gene-IY40_RS12910;Name=IY40_RS12910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS12910;old_locus_tag=IY40_13125 NZ_JPQY01000019.1 Protein Homology CDS 29007 29471 . - 0 ID=cds-WP_025303790.1;Parent=gene-IY40_RS12910;Dbxref=GenBank:WP_025303790.1;Name=WP_025303790.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004936498.1;locus_tag=IY40_RS12910;product=DUF2919 domain-containing protein;protein_id=WP_025303790.1;transl_table=11 NZ_JPQY01000019.1 RefSeq gene 29647 30045 . + . ID=gene-IY40_RS12915;Name=IY40_RS12915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS12915;old_locus_tag=IY40_13130 NZ_JPQY01000019.1 Protein Homology CDS 29647 30045 . + 0 ID=cds-WP_043140358.1;Parent=gene-IY40_RS12915;Dbxref=GenBank:WP_043140358.1;Name=WP_043140358.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017893589.1;locus_tag=IY40_RS12915;product=YgiW/YdeI family stress tolerance OB fold protein;protein_id=WP_043140358.1;transl_table=11 NZ_JPQY01000019.1 RefSeq gene 30088 30513 . - . ID=gene-IY40_RS12920;Name=IY40_RS12920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS12920;old_locus_tag=IY40_13135 NZ_JPQY01000019.1 Protein Homology CDS 30088 30513 . - 0 ID=cds-WP_004936504.1;Parent=gene-IY40_RS12920;Dbxref=GenBank:WP_004936504.1;Name=WP_004936504.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228147.1;locus_tag=IY40_RS12920;product=GNAT family acetyltransferase;protein_id=WP_004936504.1;transl_table=11 NZ_JPQY01000019.1 RefSeq gene 30718 31599 . + . ID=gene-IY40_RS12925;Name=amiA;gbkey=Gene;gene=amiA;gene_biotype=protein_coding;locus_tag=IY40_RS12925;old_locus_tag=IY40_13140 NZ_JPQY01000019.1 Protein Homology CDS 30718 31599 . + 0 ID=cds-WP_043140361.1;Parent=gene-IY40_RS12925;Dbxref=GenBank:WP_043140361.1;Name=WP_043140361.1;Ontology_term=GO:0009253,GO:0008745;gbkey=CDS;gene=amiA;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013814019.1;locus_tag=IY40_RS12925;product=N-acetylmuramoyl-L-alanine amidase AmiA;protein_id=WP_043140361.1;transl_table=11 NZ_JPQY01000019.1 RefSeq gene 31665 32585 . + . ID=gene-IY40_RS12930;Name=hemF;gbkey=Gene;gene=hemF;gene_biotype=protein_coding;locus_tag=IY40_RS12930;old_locus_tag=IY40_13145 NZ_JPQY01000019.1 Protein Homology CDS 31665 32585 . + 0 ID=cds-WP_043140365.1;Parent=gene-IY40_RS12930;Dbxref=GenBank:WP_043140365.1;Name=WP_043140365.1;Ontology_term=GO:0006779,GO:0004109;gbkey=CDS;gene=hemF;go_function=coproporphyrinogen oxidase activity|0004109||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004936510.1;locus_tag=IY40_RS12930;product=oxygen-dependent coproporphyrinogen oxidase;protein_id=WP_043140365.1;transl_table=11 NZ_JPQY01000019.1 RefSeq gene 32585 33040 . + . ID=gene-IY40_RS12935;Name=IY40_RS12935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS12935;old_locus_tag=IY40_13150 NZ_JPQY01000019.1 Protein Homology CDS 32585 33040 . + 0 ID=cds-WP_025303794.1;Parent=gene-IY40_RS12935;Dbxref=GenBank:WP_025303794.1;Name=WP_025303794.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004936514.1;locus_tag=IY40_RS12935;product=YaiI/YqxD family protein;protein_id=WP_025303794.1;transl_table=11 NZ_JPQY01000019.1 RefSeq gene 33063 35303 . - . ID=gene-IY40_RS12940;Name=IY40_RS12940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS12940;old_locus_tag=IY40_13155 NZ_JPQY01000019.1 Protein Homology CDS 33063 35303 . - 0 ID=cds-WP_043140368.1;Parent=gene-IY40_RS12940;Dbxref=GenBank:WP_043140368.1;Name=WP_043140368.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017893592.1;locus_tag=IY40_RS12940;product=TonB-dependent receptor domain-containing protein;protein_id=WP_043140368.1;transl_table=11 NZ_JPQY01000019.1 RefSeq gene 35425 37551 . - . ID=gene-IY40_RS12945;Name=IY40_RS12945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS12945;old_locus_tag=IY40_13160 NZ_JPQY01000019.1 Protein Homology CDS 35425 37551 . - 0 ID=cds-WP_080287134.1;Parent=gene-IY40_RS12945;Dbxref=GenBank:WP_080287134.1;Name=WP_080287134.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016926771.1;locus_tag=IY40_RS12945;product=S9 family peptidase;protein_id=WP_080287134.1;transl_table=11 NZ_JPQY01000019.1 RefSeq gene 37606 38403 . - . ID=gene-IY40_RS12950;Name=IY40_RS12950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS12950;old_locus_tag=IY40_13165 NZ_JPQY01000019.1 Protein Homology CDS 37606 38403 . - 0 ID=cds-WP_025303797.1;Parent=gene-IY40_RS12950;Dbxref=GenBank:WP_025303797.1;Name=WP_025303797.1;Ontology_term=GO:0031992,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=energy transducer activity|0031992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019453862.1;locus_tag=IY40_RS12950;product=energy transducer TonB family protein;protein_id=WP_025303797.1;transl_table=11 NZ_JPQY01000019.1 RefSeq gene 38506 39345 . - . ID=gene-IY40_RS12955;Name=IY40_RS12955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS12955;old_locus_tag=IY40_13170 NZ_JPQY01000019.1 Protein Homology CDS 38506 39345 . - 0 ID=cds-WP_025303798.1;Parent=gene-IY40_RS12955;Dbxref=GenBank:WP_025303798.1;Name=WP_025303798.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004936525.1;locus_tag=IY40_RS12955;product=ChaN family lipoprotein;protein_id=WP_025303798.1;transl_table=11 NZ_JPQY01000019.1 RefSeq gene 39523 40932 . + . ID=gene-IY40_RS12960;Name=mmuP;gbkey=Gene;gene=mmuP;gene_biotype=protein_coding;locus_tag=IY40_RS12960;old_locus_tag=IY40_13175 NZ_JPQY01000019.1 Protein Homology CDS 39523 40932 . + 0 ID=cds-WP_028127770.1;Parent=gene-IY40_RS12960;Dbxref=GenBank:WP_028127770.1;Name=WP_028127770.1;Ontology_term=GO:0055085;gbkey=CDS;gene=mmuP;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015378686.1;locus_tag=IY40_RS12960;product=S-methylmethionine permease;protein_id=WP_028127770.1;transl_table=11 NZ_JPQY01000019.1 RefSeq gene 40922 41860 . + . ID=gene-IY40_RS12965;Name=mmuM;gbkey=Gene;gene=mmuM;gene_biotype=protein_coding;locus_tag=IY40_RS12965;old_locus_tag=IY40_13180 NZ_JPQY01000019.1 Protein Homology CDS 40922 41860 . + 0 ID=cds-WP_043140370.1;Parent=gene-IY40_RS12965;Dbxref=GenBank:WP_043140370.1;Name=WP_043140370.1;Ontology_term=GO:0009086,GO:0047150;gbkey=CDS;gene=mmuM;go_function=betaine-homocysteine S-methyltransferase activity|0047150||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004947739.1;locus_tag=IY40_RS12965;product=homocysteine S-methyltransferase;protein_id=WP_043140370.1;transl_table=11 NZ_JPQY01000019.1 RefSeq gene 41910 44189 . - . ID=gene-IY40_RS12970;Name=maeB;gbkey=Gene;gene=maeB;gene_biotype=protein_coding;locus_tag=IY40_RS12970;old_locus_tag=IY40_13185 NZ_JPQY01000019.1 Protein Homology CDS 41910 44189 . - 0 ID=cds-WP_016926766.1;Parent=gene-IY40_RS12970;Dbxref=GenBank:WP_016926766.1;Name=WP_016926766.1;gbkey=CDS;gene=maeB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000344297.1;locus_tag=IY40_RS12970;product=NADP-dependent oxaloacetate-decarboxylating malate dehydrogenase;protein_id=WP_016926766.1;transl_table=11 NZ_JPQY01000019.1 RefSeq gene 44405 44578 . - . ID=gene-IY40_RS26380;Name=lysC;gbkey=Gene;gene=lysC;gene_biotype=protein_coding;locus_tag=IY40_RS26380 NZ_JPQY01000019.1 Protein Homology CDS 44405 44578 . - 0 ID=cds-WP_043140373.1;Parent=gene-IY40_RS26380;Dbxref=GenBank:WP_043140373.1;Name=WP_043140373.1;gbkey=CDS;gene=lysC;inference=COORDINATES: protein motif:HMM:NF048206.1;locus_tag=IY40_RS26380;product=Rz1-like lysis system protein LysC;protein_id=WP_043140373.1;transl_table=11 NZ_JPQY01000019.1 RefSeq gene 44559 44939 . - . ID=gene-IY40_RS12980;Name=IY40_RS12980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS12980;old_locus_tag=IY40_13195 NZ_JPQY01000019.1 Protein Homology CDS 44559 44939 . - 0 ID=cds-WP_043140376.1;Parent=gene-IY40_RS12980;Dbxref=GenBank:WP_043140376.1;Name=WP_043140376.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019453867.1;locus_tag=IY40_RS12980;product=DUF2570 family protein;protein_id=WP_043140376.1;transl_table=11 NZ_JPQY01000019.1 RefSeq gene 44936 45337 . - . ID=gene-IY40_RS12985;Name=IY40_RS12985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS12985;old_locus_tag=IY40_13200 NZ_JPQY01000019.1 Protein Homology CDS 44936 45337 . - 0 ID=cds-WP_025303803.1;Parent=gene-IY40_RS12985;Dbxref=GenBank:WP_025303803.1;Name=WP_025303803.1;Ontology_term=GO:0071554,GO:0008233;gbkey=CDS;go_function=peptidase activity|0008233||IEA;go_process=cell wall organization or biogenesis|0071554||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004936549.1;locus_tag=IY40_RS12985;product=M15 family metallopeptidase;protein_id=WP_025303803.1;transl_table=11 NZ_JPQY01000019.1 RefSeq gene 45327 45653 . - . ID=gene-IY40_RS12990;Name=IY40_RS12990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS12990;old_locus_tag=IY40_13205 NZ_JPQY01000019.1 Protein Homology CDS 45327 45653 . - 0 ID=cds-WP_004936551.1;Parent=gene-IY40_RS12990;Dbxref=GenBank:WP_004936551.1;Name=WP_004936551.1;Ontology_term=GO:0019835;gbkey=CDS;go_process=cytolysis|0019835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004936551.1;locus_tag=IY40_RS12990;product=phage holin%2C lambda family;protein_id=WP_004936551.1;transl_table=11 NZ_JPQY01000019.1 RefSeq gene 45947 47446 . + . ID=gene-IY40_RS12995;Name=IY40_RS12995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS12995;old_locus_tag=IY40_13210 NZ_JPQY01000019.1 Protein Homology CDS 45947 47446 . + 0 ID=cds-WP_043140380.1;Parent=gene-IY40_RS12995;Dbxref=GenBank:WP_043140380.1;Name=WP_043140380.1;Ontology_term=GO:0005975;gbkey=CDS;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004936562.1;locus_tag=IY40_RS12995;product=glycosyl hydrolase family 18 protein;protein_id=WP_043140380.1;transl_table=11 NZ_JPQY01000019.1 RefSeq gene 47532 48473 . - . ID=gene-IY40_RS13000;Name=IY40_RS13000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS13000;old_locus_tag=IY40_13215 NZ_JPQY01000019.1 Protein Homology CDS 47532 48473 . - 0 ID=cds-WP_043140385.1;Parent=gene-IY40_RS13000;Dbxref=GenBank:WP_043140385.1;Name=WP_043140385.1;Ontology_term=GO:0001216,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription activator activity|0001216||IEA,DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004947759.1;locus_tag=IY40_RS13000;product=LysR family transcriptional regulator;protein_id=WP_043140385.1;transl_table=11 NZ_JPQY01000019.1 RefSeq gene 48878 49471 . + . ID=gene-IY40_RS13005;Name=IY40_RS13005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS13005;old_locus_tag=IY40_13220 NZ_JPQY01000019.1 Protein Homology CDS 48878 49471 . + 0 ID=cds-WP_004936574.1;Parent=gene-IY40_RS13005;Dbxref=GenBank:WP_004936574.1;Name=WP_004936574.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013814029.1;locus_tag=IY40_RS13005;product=lytic polysaccharide monooxygenase;protein_id=WP_004936574.1;transl_table=11 NZ_JPQY01000019.1 RefSeq gene 49538 50500 . - . ID=gene-IY40_RS13010;Name=IY40_RS13010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS13010;old_locus_tag=IY40_13225 NZ_JPQY01000019.1 Protein Homology CDS 49538 50500 . - 0 ID=cds-WP_025303807.1;Parent=gene-IY40_RS13010;Dbxref=GenBank:WP_025303807.1;Name=WP_025303807.1;Ontology_term=GO:0006355,GO:0003677,GO:0030246;gbkey=CDS;go_function=DNA binding|0003677||IEA,carbohydrate binding|0030246||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015673306.1;locus_tag=IY40_RS13010;product=sugar-binding transcriptional regulator;protein_id=WP_025303807.1;transl_table=11 NZ_JPQY01000019.1 RefSeq gene 50596 51252 . - . ID=gene-IY40_RS13015;Name=dhaL;gbkey=Gene;gene=dhaL;gene_biotype=protein_coding;locus_tag=IY40_RS13015;old_locus_tag=IY40_13230 NZ_JPQY01000019.1 Protein Homology CDS 50596 51252 . - 0 ID=cds-WP_043140390.1;Parent=gene-IY40_RS13015;Dbxref=GenBank:WP_043140390.1;Name=WP_043140390.1;Ontology_term=GO:0006071,GO:0047324;gbkey=CDS;gene=dhaL;go_function=phosphoenolpyruvate-glycerone phosphotransferase activity|0047324||IEA;go_process=glycerol metabolic process|0006071||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004936578.1;locus_tag=IY40_RS13015;product=dihydroxyacetone kinase subunit DhaL;protein_id=WP_043140390.1;transl_table=11 NZ_JPQY01000019.1 RefSeq gene 51256 52257 . - . ID=gene-IY40_RS13020;Name=IY40_RS13020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS13020;old_locus_tag=IY40_13235 NZ_JPQY01000019.1 Protein Homology CDS 51256 52257 . - 0 ID=cds-WP_015378693.1;Parent=gene-IY40_RS13020;Dbxref=GenBank:WP_015378693.1;Name=WP_015378693.1;Ontology_term=GO:0006071,GO:0004371;gbkey=CDS;go_function=glycerone kinase activity|0004371||IEA;go_process=glycerol metabolic process|0006071||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105641.1;locus_tag=IY40_RS13020;product=dihydroxyacetone kinase subunit DhaK;protein_id=WP_015378693.1;transl_table=11 NZ_JPQY01000019.1 RefSeq gene 52287 53057 . - . ID=gene-IY40_RS13025;Name=IY40_RS13025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS13025;old_locus_tag=IY40_13240 NZ_JPQY01000019.1 Protein Homology CDS 52287 53057 . - 0 ID=cds-WP_025303809.1;Parent=gene-IY40_RS13025;Dbxref=GenBank:WP_025303809.1;Name=WP_025303809.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004936585.1;locus_tag=IY40_RS13025;product=SDR family oxidoreductase;protein_id=WP_025303809.1;transl_table=11 NZ_JPQY01000019.1 RefSeq gene 53093 54361 . - . ID=gene-IY40_RS13030;Name=IY40_RS13030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS13030;old_locus_tag=IY40_13245 NZ_JPQY01000019.1 Protein Homology CDS 53093 54361 . - 0 ID=cds-WP_025303810.1;Parent=gene-IY40_RS13030;Dbxref=GenBank:WP_025303810.1;Name=WP_025303810.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004936588.1;locus_tag=IY40_RS13030;product=MFS transporter;protein_id=WP_025303810.1;transl_table=11 NZ_JPQY01000019.1 RefSeq gene 54428 55540 . - . ID=gene-IY40_RS13035;Name=IY40_RS13035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS13035;old_locus_tag=IY40_13250 NZ_JPQY01000019.1 Protein Homology CDS 54428 55540 . - 0 ID=cds-WP_025303811.1;Parent=gene-IY40_RS13035;Dbxref=GenBank:WP_025303811.1;Name=WP_025303811.1;Ontology_term=GO:0008270,GO:0016491,GO:0030554;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,oxidoreductase activity|0016491||IEA,adenyl nucleotide binding|0030554||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015673311.1;locus_tag=IY40_RS13035;product=MDR/zinc-dependent alcohol dehydrogenase-like family protein;protein_id=WP_025303811.1;transl_table=11 NZ_JPQY01000019.1 RefSeq gene 55859 56317 . + . ID=gene-IY40_RS13040;Name=rpiB;gbkey=Gene;gene=rpiB;gene_biotype=protein_coding;locus_tag=IY40_RS13040;old_locus_tag=IY40_13255 NZ_JPQY01000019.1 Protein Homology CDS 55859 56317 . + 0 ID=cds-WP_025303812.1;Parent=gene-IY40_RS13040;Dbxref=GenBank:WP_025303812.1;Name=WP_025303812.1;Ontology_term=GO:0009052,GO:0004751;gbkey=CDS;gene=rpiB;go_function=ribose-5-phosphate isomerase activity|0004751||IEA;go_process=pentose-phosphate shunt%2C non-oxidative branch|0009052||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015378695.1;locus_tag=IY40_RS13040;product=ribose 5-phosphate isomerase B;protein_id=WP_025303812.1;transl_table=11 NZ_JPQY01000019.1 RefSeq gene 56511 57461 . + . ID=gene-IY40_RS13045;Name=tal;gbkey=Gene;gene=tal;gene_biotype=protein_coding;locus_tag=IY40_RS13045;old_locus_tag=IY40_13265 NZ_JPQY01000019.1 Protein Homology CDS 56511 57461 . + 0 ID=cds-WP_016926754.1;Parent=gene-IY40_RS13045;Dbxref=GenBank:WP_016926754.1;Name=WP_016926754.1;Ontology_term=GO:0006098,GO:0004801,GO:0005737;gbkey=CDS;gene=tal;go_component=cytoplasm|0005737||IEA;go_function=transaldolase activity|0004801||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011092465.1;locus_tag=IY40_RS13045;product=transaldolase;protein_id=WP_016926754.1;transl_table=11 NZ_JPQY01000019.1 RefSeq gene 57480 59474 . + . ID=gene-IY40_RS13050;Name=tkt;gbkey=Gene;gene=tkt;gene_biotype=protein_coding;locus_tag=IY40_RS13050;old_locus_tag=IY40_13270 NZ_JPQY01000019.1 Protein Homology CDS 57480 59474 . + 0 ID=cds-WP_043140393.1;Parent=gene-IY40_RS13050;Dbxref=GenBank:WP_043140393.1;Name=WP_043140393.1;Ontology_term=GO:0004802;gbkey=CDS;gene=tkt;go_function=transketolase activity|0004802||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015379005.1;locus_tag=IY40_RS13050;product=transketolase;protein_id=WP_043140393.1;transl_table=11 NZ_JPQY01000019.1 RefSeq gene 59525 60100 . - . ID=gene-IY40_RS13055;Name=nudK;gbkey=Gene;gene=nudK;gene_biotype=protein_coding;locus_tag=IY40_RS13055;old_locus_tag=IY40_13275 NZ_JPQY01000019.1 Protein Homology CDS 59525 60100 . - 0 ID=cds-WP_033643990.1;Parent=gene-IY40_RS13055;Dbxref=GenBank:WP_033643990.1;Name=WP_033643990.1;Ontology_term=GO:0016818,GO:0046872;gbkey=CDS;gene=nudK;go_function=hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012146195.1;locus_tag=IY40_RS13055;product=GDP-mannose pyrophosphatase NudK;protein_id=WP_033643990.1;transl_table=11 NZ_JPQY01000019.1 RefSeq gene 60470 62146 . + . ID=gene-IY40_RS13060;Name=narQ;gbkey=Gene;gene=narQ;gene_biotype=protein_coding;locus_tag=IY40_RS13060;old_locus_tag=IY40_13280 NZ_JPQY01000019.1 Protein Homology CDS 60470 62146 . + 0 ID=cds-WP_025303815.1;Parent=gene-IY40_RS13060;Dbxref=GenBank:WP_025303815.1;Name=WP_025303815.1;Ontology_term=GO:0000160,GO:0000155,GO:0046983,GO:0016020;gbkey=CDS;gene=narQ;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein dimerization activity|0046983||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017893608.1;locus_tag=IY40_RS13060;product=nitrate/nitrite two-component system sensor histidine kinase NarQ;protein_id=WP_025303815.1;transl_table=11 NZ_JPQY01000019.1 RefSeq gene 62308 62940 . + . ID=gene-IY40_RS13065;Name=IY40_RS13065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS13065;old_locus_tag=IY40_13285 NZ_JPQY01000019.1 Protein Homology CDS 62308 62940 . + 0 ID=cds-WP_025303816.1;Parent=gene-IY40_RS13065;Dbxref=GenBank:WP_025303816.1;Name=WP_025303816.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004941753.1;locus_tag=IY40_RS13065;product=response regulator;protein_id=WP_025303816.1;transl_table=11 NZ_JPQY01000019.1 RefSeq gene 62973 63251 . - . ID=gene-IY40_RS13070;Name=IY40_RS13070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS13070;old_locus_tag=IY40_13290 NZ_JPQY01000019.1 Protein Homology CDS 62973 63251 . - 0 ID=cds-WP_004941750.1;Parent=gene-IY40_RS13070;Dbxref=GenBank:WP_004941750.1;Name=WP_004941750.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004878030.1;locus_tag=IY40_RS13070;product=winged helix-turn-helix domain-containing protein;protein_id=WP_004941750.1;transl_table=11 NZ_JPQY01000019.1 RefSeq gene 63544 66678 . + . ID=gene-IY40_RS13075;Name=acrD;gbkey=Gene;gene=acrD;gene_biotype=protein_coding;locus_tag=IY40_RS13075;old_locus_tag=IY40_13295 NZ_JPQY01000019.1 Protein Homology CDS 63544 66678 . + 0 ID=cds-WP_025303817.1;Parent=gene-IY40_RS13075;Dbxref=GenBank:WP_025303817.1;Name=WP_025303817.1;Ontology_term=GO:0042908,GO:0015562;gbkey=CDS;gene=acrD;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=xenobiotic transport|0042908||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006317260.1;locus_tag=IY40_RS13075;product=multidrug efflux RND transporter permease AcrD;protein_id=WP_025303817.1;transl_table=11 NZ_JPQY01000019.1 RefSeq gene 66805 66864 . - . ID=gene-IY40_RS26630;Name=ypfM;gbkey=Gene;gene=ypfM;gene_biotype=protein_coding;locus_tag=IY40_RS26630 NZ_JPQY01000019.1 Protein Homology CDS 66805 66864 . - 0 ID=cds-WP_100396732.1;Parent=gene-IY40_RS26630;Dbxref=GenBank:WP_100396732.1;Name=WP_100396732.1;gbkey=CDS;gene=ypfM;inference=COORDINATES: protein motif:HMM:NF033843.1;locus_tag=IY40_RS26630;product=protein YpfM;protein_id=WP_100396732.1;transl_table=11 NZ_JPQY01000019.1 RefSeq gene 67081 67560 . + . ID=gene-IY40_RS13080;Name=IY40_RS13080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS13080;old_locus_tag=IY40_13300 NZ_JPQY01000019.1 Protein Homology CDS 67081 67560 . + 0 ID=cds-WP_043140404.1;Parent=gene-IY40_RS13080;Dbxref=GenBank:WP_043140404.1;Name=WP_043140404.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017893615.1;locus_tag=IY40_RS13080;product=tetratricopeptide repeat protein;protein_id=WP_043140404.1;transl_table=11 NZ_JPQY01000019.1 RefSeq gene 67570 68001 . + . ID=gene-IY40_RS13085;Name=IY40_RS13085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS13085;old_locus_tag=IY40_13305 NZ_JPQY01000019.1 Protein Homology CDS 67570 68001 . + 0 ID=cds-WP_025303819.1;Parent=gene-IY40_RS13085;Dbxref=GenBank:WP_025303819.1;Name=WP_025303819.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004941740.1;locus_tag=IY40_RS13085;product=GNAT family N-acetyltransferase;protein_id=WP_025303819.1;transl_table=11 NZ_JPQY01000019.1 RefSeq gene 68009 68434 . - . ID=gene-IY40_RS13090;Name=IY40_RS13090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS13090;old_locus_tag=IY40_13310 NZ_JPQY01000019.1 Protein Homology CDS 68009 68434 . - 0 ID=cds-WP_025303820.1;Parent=gene-IY40_RS13090;Dbxref=GenBank:WP_025303820.1;Name=WP_025303820.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015378701.1;locus_tag=IY40_RS13090;product=GNAT family N-acetyltransferase;protein_id=WP_025303820.1;transl_table=11 NZ_JPQY01000019.1 RefSeq gene 68966 69517 . + . ID=gene-IY40_RS13095;Name=IY40_RS13095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS13095;old_locus_tag=IY40_13315 NZ_JPQY01000019.1 Protein Homology CDS 68966 69517 . + 0 ID=cds-WP_043140408.1;Parent=gene-IY40_RS13095;Dbxref=GenBank:WP_043140408.1;Name=WP_043140408.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019453882.1;locus_tag=IY40_RS13095;product=LuxR C-terminal-related transcriptional regulator;protein_id=WP_043140408.1;transl_table=11 NZ_JPQY01000019.1 RefSeq gene 69773 70159 . + . ID=gene-IY40_RS13100;Name=IY40_RS13100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS13100;old_locus_tag=IY40_13320 NZ_JPQY01000019.1 Protein Homology CDS 69773 70159 . + 0 ID=cds-WP_043140410.1;Parent=gene-IY40_RS13100;Dbxref=GenBank:WP_043140410.1;Name=WP_043140410.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004941730.1;locus_tag=IY40_RS13100;product=ArsC family reductase;protein_id=WP_043140410.1;transl_table=11 NZ_JPQY01000019.1 RefSeq gene 70156 71283 . + . ID=gene-IY40_RS13105;Name=dapE;gbkey=Gene;gene=dapE;gene_biotype=protein_coding;locus_tag=IY40_RS13105;old_locus_tag=IY40_13325 NZ_JPQY01000019.1 Protein Homology CDS 70156 71283 . + 0 ID=cds-WP_025303823.1;Parent=gene-IY40_RS13105;Dbxref=GenBank:WP_025303823.1;Name=WP_025303823.1;Ontology_term=GO:0009089,GO:0009014;gbkey=CDS;gene=dapE;go_function=succinyl-diaminopimelate desuccinylase activity|0009014||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020078199.1;locus_tag=IY40_RS13105;product=succinyl-diaminopimelate desuccinylase;protein_id=WP_025303823.1;transl_table=11 NZ_JPQY01000019.1 RefSeq gene 71280 71954 . + . ID=gene-IY40_RS13110;Name=IY40_RS13110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS13110;old_locus_tag=IY40_13330 NZ_JPQY01000019.1 Protein Homology CDS 71280 71954 . + 0 ID=cds-WP_025303824.1;Parent=gene-IY40_RS13110;Dbxref=GenBank:WP_025303824.1;Name=WP_025303824.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006327163.1;locus_tag=IY40_RS13110;product=M15 family metallopeptidase;protein_id=WP_025303824.1;transl_table=11 NZ_JPQY01000019.1 RefSeq gene 71957 72142 . + . ID=gene-IY40_RS13115;Name=IY40_RS13115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS13115;old_locus_tag=IY40_13335 NZ_JPQY01000019.1 Protein Homology CDS 71957 72142 . + 0 ID=cds-WP_004941720.1;Parent=gene-IY40_RS13115;Dbxref=GenBank:WP_004941720.1;Name=WP_004941720.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012146215.1;locus_tag=IY40_RS13115;product=YpfN family protein;protein_id=WP_004941720.1;transl_table=11 NZ_JPQY01000019.1 RefSeq gene 72173 72862 . - . ID=gene-IY40_RS13120;Name=ypfH;gbkey=Gene;gene=ypfH;gene_biotype=protein_coding;locus_tag=IY40_RS13120;old_locus_tag=IY40_13340 NZ_JPQY01000019.1 Protein Homology CDS 72173 72862 . - 0 ID=cds-WP_043140413.1;Parent=gene-IY40_RS13120;Dbxref=GenBank:WP_043140413.1;Name=WP_043140413.1;Ontology_term=GO:0016787;gbkey=CDS;gene=ypfH;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016926743.1;locus_tag=IY40_RS13120;product=esterase;protein_id=WP_043140413.1;transl_table=11 NZ_JPQY01000019.1 RefSeq gene 72983 74995 . - . ID=gene-IY40_RS13125;Name=IY40_RS13125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS13125;old_locus_tag=IY40_13345 NZ_JPQY01000019.1 Protein Homology CDS 72983 74995 . - 0 ID=cds-WP_043140417.1;Parent=gene-IY40_RS13125;Dbxref=GenBank:WP_043140417.1;Name=WP_043140417.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017893620.1;locus_tag=IY40_RS13125;product=tRNA(Met) cytidine acetyltransferase TmcA;protein_id=WP_043140417.1;transl_table=11 NZ_JPQY01000019.1 RefSeq gene 75052 75918 . - . ID=gene-IY40_RS13130;Name=ypfJ;gbkey=Gene;gene=ypfJ;gene_biotype=protein_coding;locus_tag=IY40_RS13130;old_locus_tag=IY40_13350 NZ_JPQY01000019.1 Protein Homology CDS 75052 75918 . - 0 ID=cds-WP_043140420.1;Parent=gene-IY40_RS13130;Dbxref=GenBank:WP_043140420.1;Name=WP_043140420.1;gbkey=CDS;gene=ypfJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013814056.1;locus_tag=IY40_RS13130;product=KPN_02809 family neutral zinc metallopeptidase;protein_id=WP_043140420.1;transl_table=11 NZ_JPQY01000019.1 RefSeq gene 76128 76841 . - . ID=gene-IY40_RS13135;Name=purC;gbkey=Gene;gene=purC;gene_biotype=protein_coding;locus_tag=IY40_RS13135;old_locus_tag=IY40_13355 NZ_JPQY01000019.1 Protein Homology CDS 76128 76841 . - 0 ID=cds-WP_043140423.1;Parent=gene-IY40_RS13135;Dbxref=GenBank:WP_043140423.1;Name=WP_043140423.1;Ontology_term=GO:0006164,GO:0004639;gbkey=CDS;gene=purC;go_function=phosphoribosylaminoimidazolesuccinocarboxamide synthase activity|0004639||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017458944.1;locus_tag=IY40_RS13135;product=phosphoribosylaminoimidazolesuccinocarboxamide synthase;protein_id=WP_043140423.1;transl_table=11 NZ_JPQY01000019.1 RefSeq gene 77012 78064 . - . ID=gene-IY40_RS13140;Name=bamC;gbkey=Gene;gene=bamC;gene_biotype=protein_coding;locus_tag=IY40_RS13140;old_locus_tag=IY40_13360 NZ_JPQY01000019.1 Protein Homology CDS 77012 78064 . - 0 ID=cds-WP_025303828.1;Parent=gene-IY40_RS13140;Dbxref=GenBank:WP_025303828.1;Name=WP_025303828.1;gbkey=CDS;gene=bamC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004941705.1;locus_tag=IY40_RS13140;product=outer membrane protein assembly factor BamC;protein_id=WP_025303828.1;transl_table=11 NZ_JPQY01000019.1 RefSeq gene 78081 78962 . - . ID=gene-IY40_RS13145;Name=dapA;gbkey=Gene;gene=dapA;gene_biotype=protein_coding;locus_tag=IY40_RS13145;old_locus_tag=IY40_13365 NZ_JPQY01000019.1 Protein Homology CDS 78081 78962 . - 0 ID=cds-WP_033644005.1;Parent=gene-IY40_RS13145;Dbxref=GenBank:WP_033644005.1;Name=WP_033644005.1;Ontology_term=GO:0009089,GO:0008840;gbkey=CDS;gene=dapA;go_function=4-hydroxy-tetrahydrodipicolinate synthase activity|0008840||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_032466692.1;locus_tag=IY40_RS13145;product=4-hydroxy-tetrahydrodipicolinate synthase;protein_id=WP_033644005.1;transl_table=11 NZ_JPQY01000019.1 RefSeq gene 79073 79678 . + . ID=gene-IY40_RS13150;Name=IY40_RS13150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS13150;old_locus_tag=IY40_13370 NZ_JPQY01000019.1 Protein Homology CDS 79073 79678 . + 0 ID=cds-WP_369783268.1;Parent=gene-IY40_RS13150;Dbxref=GenBank:WP_369783268.1;Name=WP_369783268.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004876830.1;locus_tag=IY40_RS13150;product=glycine cleavage system transcriptional repressor;protein_id=WP_369783268.1;transl_table=11 NZ_JPQY01000019.1 RefSeq gene 79681 80145 . + . ID=gene-IY40_RS13155;Name=bcp;gbkey=Gene;gene=bcp;gene_biotype=protein_coding;locus_tag=IY40_RS13155;old_locus_tag=IY40_13375 NZ_JPQY01000019.1 Protein Homology CDS 79681 80145 . + 0 ID=cds-WP_025303830.1;Parent=gene-IY40_RS13155;Dbxref=GenBank:WP_025303830.1;Name=WP_025303830.1;Ontology_term=GO:0016209,GO:0016491;gbkey=CDS;gene=bcp;go_function=antioxidant activity|0016209||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019453893.1;locus_tag=IY40_RS13155;product=thioredoxin-dependent thiol peroxidase;protein_id=WP_025303830.1;transl_table=11 NZ_JPQY01000019.1 RefSeq gene 80190 81266 . - . ID=gene-IY40_RS13160;Name=IY40_RS13160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS13160;old_locus_tag=IY40_13380 NZ_JPQY01000019.1 Protein Homology CDS 80190 81266 . - 0 ID=cds-WP_025303831.1;Parent=gene-IY40_RS13160;Dbxref=GenBank:WP_025303831.1;Name=WP_025303831.1;Ontology_term=GO:0055085,GO:1905887,GO:0015562;gbkey=CDS;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=transmembrane transport|0055085||IEA,autoinducer AI-2 transmembrane transport|1905887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019453894.1;locus_tag=IY40_RS13160;product=AI-2E family transporter;protein_id=WP_025303831.1;transl_table=11 NZ_JPQY01000019.1 RefSeq gene 82119 82334 . + . ID=gene-IY40_RS13165;Name=IY40_RS13165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS13165;old_locus_tag=IY40_13390 NZ_JPQY01000019.1 Protein Homology CDS 82119 82334 . + 0 ID=cds-WP_025303832.1;Parent=gene-IY40_RS13165;Dbxref=GenBank:WP_025303832.1;Name=WP_025303832.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016926736.1;locus_tag=IY40_RS13165;product=hypothetical protein;protein_id=WP_025303832.1;transl_table=11 NZ_JPQY01000019.1 RefSeq gene 82341 83033 . - . ID=gene-IY40_RS13170;Name=IY40_RS13170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS13170;old_locus_tag=IY40_13395 NZ_JPQY01000019.1 Protein Homology CDS 82341 83033 . - 0 ID=cds-WP_043140435.1;Parent=gene-IY40_RS13170;Dbxref=GenBank:WP_043140435.1;Name=WP_043140435.1;Ontology_term=GO:0003723;gbkey=CDS;go_function=RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016926735.1;locus_tag=IY40_RS13170;product=B3/B4 domain-containing protein;protein_id=WP_043140435.1;transl_table=11 NZ_JPQY01000019.1 RefSeq gene 83077 83679 . + . ID=gene-IY40_RS13175;Name=IY40_RS13175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS13175;old_locus_tag=IY40_13400 NZ_JPQY01000019.1 Protein Homology CDS 83077 83679 . + 0 ID=cds-WP_043140438.1;Parent=gene-IY40_RS13175;Dbxref=GenBank:WP_043140438.1;Name=WP_043140438.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013813100.1;locus_tag=IY40_RS13175;product=helix-turn-helix domain-containing protein;protein_id=WP_043140438.1;transl_table=11 NZ_JPQY01000019.1 RefSeq gene 83723 84175 . + . ID=gene-IY40_RS13180;Name=IY40_RS13180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS13180;old_locus_tag=IY40_13405 NZ_JPQY01000019.1 Protein Homology CDS 83723 84175 . + 0 ID=cds-WP_025303835.1;Parent=gene-IY40_RS13180;Dbxref=GenBank:WP_025303835.1;Name=WP_025303835.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016926733.1;locus_tag=IY40_RS13180;product=GNAT family N-acetyltransferase;protein_id=WP_025303835.1;transl_table=11 NZ_JPQY01000019.1 RefSeq gene 84178 84795 . - . ID=gene-IY40_RS13185;Name=IY40_RS13185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS13185;old_locus_tag=IY40_13410 NZ_JPQY01000019.1 Protein Homology CDS 84178 84795 . - 0 ID=cds-WP_025303836.1;Parent=gene-IY40_RS13185;Dbxref=GenBank:WP_025303836.1;Name=WP_025303836.1;Ontology_term=GO:0006865,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004941674.1;locus_tag=IY40_RS13185;product=LysE family translocator;protein_id=WP_025303836.1;transl_table=11 NZ_JPQY01000019.1 RefSeq gene 84989 85450 . + . ID=gene-IY40_RS13190;Name=IY40_RS13190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS13190;old_locus_tag=IY40_13415 NZ_JPQY01000019.1 Protein Homology CDS 84989 85450 . + 0 ID=cds-WP_019452433.1;Parent=gene-IY40_RS13190;Dbxref=GenBank:WP_019452433.1;Name=WP_019452433.1;Ontology_term=GO:0043565;gbkey=CDS;go_function=sequence-specific DNA binding|0043565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004941672.1;locus_tag=IY40_RS13190;product=Lrp/AsnC family transcriptional regulator;protein_id=WP_019452433.1;transl_table=11 NZ_JPQY01000019.1 RefSeq gene 85487 86695 . - . ID=gene-IY40_RS13195;Name=IY40_RS13195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS13195;old_locus_tag=IY40_13420 NZ_JPQY01000019.1 Protein Homology CDS 85487 86695 . - 0 ID=cds-WP_043140440.1;Parent=gene-IY40_RS13195;Dbxref=GenBank:WP_043140440.1;Name=WP_043140440.1;Ontology_term=GO:0006116,GO:0003954;gbkey=CDS;go_function=NADH dehydrogenase activity|0003954||IEA;go_process=obsolete NADH oxidation|0006116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004941669.1;locus_tag=IY40_RS13195;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_043140440.1;transl_table=11 NZ_JPQY01000019.1 RefSeq gene 86856 87395 . - . ID=gene-IY40_RS13200;Name=IY40_RS13200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS13200;old_locus_tag=IY40_13425 NZ_JPQY01000019.1 Protein Homology CDS 86856 87395 . - 0 ID=cds-WP_025303838.1;Parent=gene-IY40_RS13200;Dbxref=GenBank:WP_025303838.1;Name=WP_025303838.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004941666.1;locus_tag=IY40_RS13200;product=RrF2 family transcriptional regulator;protein_id=WP_025303838.1;transl_table=11 NZ_JPQY01000019.1 RefSeq gene 87736 89205 . + . ID=gene-IY40_RS13205;Name=bepA;gbkey=Gene;gene=bepA;gene_biotype=protein_coding;locus_tag=IY40_RS13205;old_locus_tag=IY40_13430 NZ_JPQY01000019.1 Protein Homology CDS 87736 89205 . + 0 ID=cds-WP_025303839.1;Parent=gene-IY40_RS13205;Dbxref=GenBank:WP_025303839.1;Name=WP_025303839.1;gbkey=CDS;gene=bepA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019452430.1;locus_tag=IY40_RS13205;product=beta-barrel assembly-enhancing protease;protein_id=WP_025303839.1;transl_table=11 NZ_JPQY01000019.1 RefSeq gene 89226 89579 . + . ID=gene-IY40_RS13210;Name=arsC;gbkey=Gene;gene=arsC;gene_biotype=protein_coding;locus_tag=IY40_RS13210;old_locus_tag=IY40_13435 NZ_JPQY01000019.1 Protein Homology CDS 89226 89579 . + 0 ID=cds-WP_033648817.1;Parent=gene-IY40_RS13210;Dbxref=GenBank:WP_033648817.1;Name=WP_033648817.1;Note=This arsenate reductase requires both glutathione and glutaredoxin to convert arsenate to arsenite%2C after which the efflux transporter formed by ArsA and ArsB can extrude the arsenite from the cell%2C providing resistance.;Ontology_term=GO:0046685,GO:0008794;gbkey=CDS;gene=arsC;go_function=arsenate reductase (glutaredoxin) activity|0008794||IEA;go_process=response to arsenic-containing substance|0046685||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006316889.1;locus_tag=IY40_RS13210;product=arsenate reductase (glutaredoxin);protein_id=WP_033648817.1;transl_table=11 NZ_JPQY01000019.1 RefSeq gene 89779 90009 . + . ID=gene-IY40_RS13215;Name=IY40_RS13215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS13215;old_locus_tag=IY40_13440 NZ_JPQY01000019.1 Protein Homology CDS 89779 90009 . + 0 ID=cds-WP_043140445.1;Parent=gene-IY40_RS13215;Dbxref=GenBank:WP_043140445.1;Name=WP_043140445.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004255083.1;locus_tag=IY40_RS13215;product=hypothetical protein;protein_id=WP_043140445.1;transl_table=11 NZ_JPQY01000019.1 RefSeq gene 90023 90568 . + . ID=gene-IY40_RS13220;Name=IY40_RS13220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS13220;old_locus_tag=IY40_13445 NZ_JPQY01000019.1 Protein Homology CDS 90023 90568 . + 0 ID=cds-WP_043140446.1;Parent=gene-IY40_RS13220;Dbxref=GenBank:WP_043140446.1;Name=WP_043140446.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004104113.1;locus_tag=IY40_RS13220;product=helix-turn-helix transcriptional regulator;protein_id=WP_043140446.1;transl_table=11 NZ_JPQY01000019.1 RefSeq gene 90576 91277 . - . ID=gene-IY40_RS13225;Name=hda;gbkey=Gene;gene=hda;gene_biotype=protein_coding;locus_tag=IY40_RS13225;old_locus_tag=IY40_13450 NZ_JPQY01000019.1 Protein Homology CDS 90576 91277 . - 0 ID=cds-WP_025159568.1;Parent=gene-IY40_RS13225;Dbxref=GenBank:WP_025159568.1;Name=WP_025159568.1;gbkey=CDS;gene=hda;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001307333.1;locus_tag=IY40_RS13225;product=DnaA inactivator Hda;protein_id=WP_025159568.1;transl_table=11 NZ_JPQY01000019.1 RefSeq gene 91550 92065 . + . ID=gene-IY40_RS13230;Name=IY40_RS13230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS13230;old_locus_tag=IY40_13455 NZ_JPQY01000019.1 Protein Homology CDS 91550 92065 . + 0 ID=cds-WP_016926729.1;Parent=gene-IY40_RS13230;Dbxref=GenBank:WP_016926729.1;Name=WP_016926729.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013814078.1;locus_tag=IY40_RS13230;product=hypothetical protein;protein_id=WP_016926729.1;transl_table=11 NZ_JPQY01000019.1 RefSeq gene 92099 92347 . + . ID=gene-IY40_RS13235;Name=IY40_RS13235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS13235;old_locus_tag=IY40_13460 NZ_JPQY01000019.1 Protein Homology CDS 92099 92347 . + 0 ID=cds-WP_016926728.1;Parent=gene-IY40_RS13235;Dbxref=GenBank:WP_016926728.1;Name=WP_016926728.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227447.1;locus_tag=IY40_RS13235;product=GlsB/YeaQ/YmgE family stress response membrane protein;protein_id=WP_016926728.1;transl_table=11 NZ_JPQY01000019.1 RefSeq gene 92395 93684 . - . ID=gene-IY40_RS13240;Name=uraA;gbkey=Gene;gene=uraA;gene_biotype=protein_coding;locus_tag=IY40_RS13240;old_locus_tag=IY40_13465 NZ_JPQY01000019.1 Protein Homology CDS 92395 93684 . - 0 ID=cds-WP_016926727.1;Parent=gene-IY40_RS13240;Dbxref=GenBank:WP_016926727.1;Name=WP_016926727.1;Ontology_term=GO:0022857;gbkey=CDS;gene=uraA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004941645.1;locus_tag=IY40_RS13240;product=uracil permease;protein_id=WP_016926727.1;transl_table=11 NZ_JPQY01000019.1 RefSeq gene 93761 94387 . - . ID=gene-IY40_RS13245;Name=upp;gbkey=Gene;gene=upp;gene_biotype=protein_coding;locus_tag=IY40_RS13245;old_locus_tag=IY40_13470 NZ_JPQY01000019.1 Protein Homology CDS 93761 94387 . - 0 ID=cds-WP_004941642.1;Parent=gene-IY40_RS13245;Dbxref=GenBank:WP_004941642.1;Name=WP_004941642.1;Ontology_term=GO:0009116,GO:0004845;gbkey=CDS;gene=upp;go_function=uracil phosphoribosyltransferase activity|0004845||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001295473.1;locus_tag=IY40_RS13245;product=uracil phosphoribosyltransferase;protein_id=WP_004941642.1;transl_table=11 NZ_JPQY01000019.1 RefSeq gene 94643 95680 . + . ID=gene-IY40_RS13250;Name=purM;gbkey=Gene;gene=purM;gene_biotype=protein_coding;locus_tag=IY40_RS13250;old_locus_tag=IY40_13475 NZ_JPQY01000019.1 Protein Homology CDS 94643 95680 . + 0 ID=cds-WP_025303843.1;Parent=gene-IY40_RS13250;Dbxref=GenBank:WP_025303843.1;Name=WP_025303843.1;Ontology_term=GO:0006189,GO:0004641;gbkey=CDS;gene=purM;go_function=phosphoribosylformylglycinamidine cyclo-ligase activity|0004641||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015839417.1;locus_tag=IY40_RS13250;product=phosphoribosylformylglycinamidine cyclo-ligase;protein_id=WP_025303843.1;transl_table=11 NZ_JPQY01000019.1 RefSeq gene 95680 96318 . + . ID=gene-IY40_RS13255;Name=purN;gbkey=Gene;gene=purN;gene_biotype=protein_coding;locus_tag=IY40_RS13255;old_locus_tag=IY40_13480 NZ_JPQY01000019.1 Protein Homology CDS 95680 96318 . + 0 ID=cds-WP_025303844.1;Parent=gene-IY40_RS13255;Dbxref=GenBank:WP_025303844.1;Name=WP_025303844.1;Ontology_term=GO:0006189,GO:0004644;gbkey=CDS;gene=purN;go_function=phosphoribosylglycinamide formyltransferase activity|0004644||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004391279.1;locus_tag=IY40_RS13255;product=phosphoribosylglycinamide formyltransferase;protein_id=WP_025303844.1;transl_table=11 NZ_JPQY01000019.1 RefSeq gene 96432 96983 . + . ID=gene-IY40_RS13260;Name=speG;gbkey=Gene;gene=speG;gene_biotype=protein_coding;locus_tag=IY40_RS13260;old_locus_tag=IY40_13485 NZ_JPQY01000019.1 Protein Homology CDS 96432 96983 . + 0 ID=cds-WP_004941631.1;Parent=gene-IY40_RS13260;Dbxref=GenBank:WP_004941631.1;Name=WP_004941631.1;Ontology_term=GO:0008080;gbkey=CDS;gene=speG;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004951898.1;locus_tag=IY40_RS13260;product=spermidine N1-acetyltransferase;protein_id=WP_004941631.1;transl_table=11 NZ_JPQY01000019.1 RefSeq gene 97180 97395 . + . ID=gene-IY40_RS13265;Name=IY40_RS13265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS13265;old_locus_tag=IY40_13490 NZ_JPQY01000019.1 Protein Homology CDS 97180 97395 . + 0 ID=cds-WP_043140451.1;Parent=gene-IY40_RS13265;Dbxref=GenBank:WP_043140451.1;Name=WP_043140451.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015378721.1;locus_tag=IY40_RS13265;product=hypothetical protein;protein_id=WP_043140451.1;transl_table=11 NZ_JPQY01000019.1 RefSeq gene 97533 97916 . - . ID=gene-IY40_RS13270;Name=IY40_RS13270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS13270;old_locus_tag=IY40_13495 NZ_JPQY01000019.1 GeneMarkS-2+ CDS 97533 97916 . - 0 ID=cds-WP_043140454.1;Parent=gene-IY40_RS13270;Dbxref=GenBank:WP_043140454.1;Name=WP_043140454.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IY40_RS13270;product=hypothetical protein;protein_id=WP_043140454.1;transl_table=11 NZ_JPQY01000019.1 RefSeq gene 97913 103867 . - . ID=gene-IY40_RS13275;Name=IY40_RS13275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS13275 NZ_JPQY01000019.1 Protein Homology CDS 97913 103867 . - 0 ID=cds-WP_043140457.1;Parent=gene-IY40_RS13275;Dbxref=GenBank:WP_043140457.1;Name=WP_043140457.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006327221.1;locus_tag=IY40_RS13275;product=DUF637 domain-containing protein;protein_id=WP_043140457.1;transl_table=11 NZ_JPQY01000019.1 RefSeq gene 103928 105595 . - . ID=gene-IY40_RS13280;Name=IY40_RS13280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS13280;old_locus_tag=IY40_13505 NZ_JPQY01000019.1 Protein Homology CDS 103928 105595 . - 0 ID=cds-WP_043140462.1;Parent=gene-IY40_RS13280;Dbxref=GenBank:WP_043140462.1;Name=WP_043140462.1;Ontology_term=GO:0006811,GO:0015031,GO:0015288,GO:0046930;gbkey=CDS;go_component=pore complex|0046930||IEA;go_function=porin activity|0015288||IEA;go_process=monoatomic ion transport|0006811||IEA,protein transport|0015031||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006327222.1;locus_tag=IY40_RS13280;product=ShlB/FhaC/HecB family hemolysin secretion/activation protein;protein_id=WP_043140462.1;transl_table=11 NZ_JPQY01000019.1 RefSeq gene 105888 106079 . - . ID=gene-IY40_RS26495;Name=IY40_RS26495;end_range=106079,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS26495;old_locus_tag=IY40_13510;partial=true NZ_JPQY01000019.1 GeneMarkS-2+ CDS 105888 106079 . - 0 ID=cds-WP_043140465.1;Parent=gene-IY40_RS26495;Dbxref=GenBank:WP_043140465.1;Name=WP_043140465.1;end_range=106079,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IY40_RS26495;partial=true;product=hypothetical protein;protein_id=WP_043140465.1;transl_table=11 ##sequence-region NZ_JPQY01000020.1 1 63416 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=615 NZ_JPQY01000020.1 RefSeq region 1 63416 . + . ID=NZ_JPQY01000020.1:1..63416;Dbxref=taxon:615;collected-by=Mahloro H. Serepa%3B Vincent M. Gray;collection-date=2013-04-11;country=South Africa: North West Province;gbkey=Src;genome=genomic;identified-by=Mahloro H. Serepa%3B Vincent M. Gray;isolation-source=entomopathogenic nematode Oscheius sp. MCB living in soil;mol_type=genomic DNA;nat-host=Oscheius sp. MCB;strain=MCB NZ_JPQY01000020.1 RefSeq gene 1 1298 . + . ID=gene-IY40_RS13290;Name=IY40_RS13290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS13290;partial=true;start_range=.,1 NZ_JPQY01000020.1 Protein Homology CDS 1 1298 . + 2 ID=cds-WP_043140488.1;Parent=gene-IY40_RS13290;Dbxref=GenBank:WP_043140488.1;Name=WP_043140488.1;Ontology_term=GO:0006865,GO:0055085,GO:0015171,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004935209.1;locus_tag=IY40_RS13290;partial=true;product=amino acid permease;protein_id=WP_043140488.1;start_range=.,1;transl_table=11 NZ_JPQY01000020.1 RefSeq gene 1349 1945 . - . ID=gene-IY40_RS13295;Name=paaY;gbkey=Gene;gene=paaY;gene_biotype=protein_coding;locus_tag=IY40_RS13295;old_locus_tag=IY40_13520 NZ_JPQY01000020.1 Protein Homology CDS 1349 1945 . - 0 ID=cds-WP_021505794.1;Parent=gene-IY40_RS13295;Dbxref=GenBank:WP_021505794.1;Name=WP_021505794.1;Ontology_term=GO:0010124;gbkey=CDS;gene=paaY;go_process=phenylacetate catabolic process|0010124||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015672968.1;locus_tag=IY40_RS13295;product=phenylacetic acid degradation protein PaaY;protein_id=WP_021505794.1;transl_table=11 NZ_JPQY01000020.1 RefSeq gene 1958 2896 . - . ID=gene-IY40_RS13300;Name=paaX;gbkey=Gene;gene=paaX;gene_biotype=protein_coding;locus_tag=IY40_RS13300;old_locus_tag=IY40_13525 NZ_JPQY01000020.1 Protein Homology CDS 1958 2896 . - 0 ID=cds-WP_043140497.1;Parent=gene-IY40_RS13300;Dbxref=GenBank:WP_043140497.1;Name=WP_043140497.1;Ontology_term=GO:0006351;gbkey=CDS;gene=paaX;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015378358.1;locus_tag=IY40_RS13300;product=phenylacetic acid degradation operon negative regulatory protein PaaX;protein_id=WP_043140497.1;transl_table=11 NZ_JPQY01000020.1 RefSeq gene 2976 4283 . - . ID=gene-IY40_RS13305;Name=paaK;gbkey=Gene;gene=paaK;gene_biotype=protein_coding;locus_tag=IY40_RS13305;old_locus_tag=IY40_13530 NZ_JPQY01000020.1 Protein Homology CDS 2976 4283 . - 0 ID=cds-WP_016927188.1;Parent=gene-IY40_RS13305;Dbxref=GenBank:WP_016927188.1;Name=WP_016927188.1;Ontology_term=GO:0010124,GO:0047475;gbkey=CDS;gene=paaK;go_function=phenylacetate-CoA ligase activity|0047475||IEA;go_process=phenylacetate catabolic process|0010124||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004946349.1;locus_tag=IY40_RS13305;product=phenylacetate--CoA ligase PaaK;protein_id=WP_016927188.1;transl_table=11 NZ_JPQY01000020.1 RefSeq gene 4299 5504 . - . ID=gene-IY40_RS13310;Name=pcaF;gbkey=Gene;gene=pcaF;gene_biotype=protein_coding;locus_tag=IY40_RS13310;old_locus_tag=IY40_13535 NZ_JPQY01000020.1 Protein Homology CDS 4299 5504 . - 0 ID=cds-WP_043140500.1;Parent=gene-IY40_RS13310;Dbxref=GenBank:WP_043140500.1;Name=WP_043140500.1;Ontology_term=GO:0019619,GO:0016747;gbkey=CDS;gene=pcaF;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;go_process=3%2C4-dihydroxybenzoate catabolic process|0019619||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003857333.1;locus_tag=IY40_RS13310;product=3-oxoadipyl-CoA thiolase;protein_id=WP_043140500.1;transl_table=11 NZ_JPQY01000020.1 RefSeq gene 5501 5941 . - . ID=gene-IY40_RS13315;Name=paaI;gbkey=Gene;gene=paaI;gene_biotype=protein_coding;locus_tag=IY40_RS13315;old_locus_tag=IY40_13540 NZ_JPQY01000020.1 Protein Homology CDS 5501 5941 . - 0 ID=cds-WP_016927190.1;Parent=gene-IY40_RS13315;Dbxref=GenBank:WP_016927190.1;Name=WP_016927190.1;Ontology_term=GO:0010124,GO:0016790;gbkey=CDS;gene=paaI;go_function=thiolester hydrolase activity|0016790||IEA;go_process=phenylacetate catabolic process|0010124||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015378355.1;locus_tag=IY40_RS13315;product=hydroxyphenylacetyl-CoA thioesterase PaaI;protein_id=WP_016927190.1;transl_table=11 NZ_JPQY01000020.1 RefSeq gene 5938 7470 . - . ID=gene-IY40_RS13320;Name=IY40_RS13320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS13320;old_locus_tag=IY40_13545 NZ_JPQY01000020.1 Protein Homology CDS 5938 7470 . - 0 ID=cds-WP_043140503.1;Parent=gene-IY40_RS13320;Dbxref=GenBank:WP_043140503.1;Name=WP_043140503.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004935191.1;locus_tag=IY40_RS13320;product=3-hydroxyacyl-CoA dehydrogenase;protein_id=WP_043140503.1;transl_table=11 NZ_JPQY01000020.1 RefSeq gene 7473 8264 . - . ID=gene-IY40_RS13325;Name=paaG;gbkey=Gene;gene=paaG;gene_biotype=protein_coding;locus_tag=IY40_RS13325;old_locus_tag=IY40_13550 NZ_JPQY01000020.1 Protein Homology CDS 7473 8264 . - 0 ID=cds-WP_043140507.1;Parent=gene-IY40_RS13325;Dbxref=GenBank:WP_043140507.1;Name=WP_043140507.1;Ontology_term=GO:0010124,GO:0016853;gbkey=CDS;gene=paaG;go_function=isomerase activity|0016853||IEA;go_process=phenylacetate catabolic process|0010124||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017893312.1;locus_tag=IY40_RS13325;product=2-(1%2C2-epoxy-1%2C2-dihydrophenyl)acetyl-CoA isomerase PaaG;protein_id=WP_043140507.1;transl_table=11 NZ_JPQY01000020.1 RefSeq gene 8268 9041 . - . ID=gene-IY40_RS13330;Name=paaF;gbkey=Gene;gene=paaF;gene_biotype=protein_coding;locus_tag=IY40_RS13330;old_locus_tag=IY40_13555 NZ_JPQY01000020.1 Protein Homology CDS 8268 9041 . - 0 ID=cds-WP_043140512.1;Parent=gene-IY40_RS13330;Dbxref=GenBank:WP_043140512.1;Name=WP_043140512.1;gbkey=CDS;gene=paaF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006319278.1;locus_tag=IY40_RS13330;product=2%2C3-dehydroadipyl-CoA hydratase PaaF;protein_id=WP_043140512.1;transl_table=11 NZ_JPQY01000020.1 RefSeq gene 9050 10108 . - . ID=gene-IY40_RS13335;Name=paaE;gbkey=Gene;gene=paaE;gene_biotype=protein_coding;locus_tag=IY40_RS13335;old_locus_tag=IY40_13560 NZ_JPQY01000020.1 Protein Homology CDS 9050 10108 . - 0 ID=cds-WP_043140515.1;Parent=gene-IY40_RS13335;Dbxref=GenBank:WP_043140515.1;Name=WP_043140515.1;Ontology_term=GO:0010124;gbkey=CDS;gene=paaE;go_process=phenylacetate catabolic process|0010124||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012145797.1;locus_tag=IY40_RS13335;product=1%2C2-phenylacetyl-CoA epoxidase subunit PaaE;protein_id=WP_043140515.1;transl_table=11 NZ_JPQY01000020.1 RefSeq gene 10122 10619 . - . ID=gene-IY40_RS13340;Name=paaD;gbkey=Gene;gene=paaD;gene_biotype=protein_coding;locus_tag=IY40_RS13340;old_locus_tag=IY40_13565 NZ_JPQY01000020.1 Protein Homology CDS 10122 10619 . - 0 ID=cds-WP_025303365.1;Parent=gene-IY40_RS13340;Dbxref=GenBank:WP_025303365.1;Name=WP_025303365.1;Ontology_term=GO:0010124;gbkey=CDS;gene=paaD;go_process=phenylacetate catabolic process|0010124||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013813574.1;locus_tag=IY40_RS13340;product=1%2C2-phenylacetyl-CoA epoxidase subunit PaaD;protein_id=WP_025303365.1;transl_table=11 NZ_JPQY01000020.1 RefSeq gene 10629 11387 . - . ID=gene-IY40_RS13345;Name=paaC;gbkey=Gene;gene=paaC;gene_biotype=protein_coding;locus_tag=IY40_RS13345;old_locus_tag=IY40_13570 NZ_JPQY01000020.1 Protein Homology CDS 10629 11387 . - 0 ID=cds-WP_043140519.1;Parent=gene-IY40_RS13345;Dbxref=GenBank:WP_043140519.1;Name=WP_043140519.1;Ontology_term=GO:0010124;gbkey=CDS;gene=paaC;go_process=phenylacetate catabolic process|0010124||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004935177.1;locus_tag=IY40_RS13345;product=1%2C2-phenylacetyl-CoA epoxidase subunit PaaC;protein_id=WP_043140519.1;transl_table=11 NZ_JPQY01000020.1 RefSeq gene 11396 11683 . - . ID=gene-IY40_RS13350;Name=paaB;gbkey=Gene;gene=paaB;gene_biotype=protein_coding;locus_tag=IY40_RS13350;old_locus_tag=IY40_13575 NZ_JPQY01000020.1 Protein Homology CDS 11396 11683 . - 0 ID=cds-WP_004935173.1;Parent=gene-IY40_RS13350;Dbxref=GenBank:WP_004935173.1;Name=WP_004935173.1;Ontology_term=GO:0010124;gbkey=CDS;gene=paaB;go_process=phenylacetate catabolic process|0010124||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226670.1;locus_tag=IY40_RS13350;product=1%2C2-phenylacetyl-CoA epoxidase subunit PaaB;protein_id=WP_004935173.1;transl_table=11 NZ_JPQY01000020.1 RefSeq gene 11705 12643 . - . ID=gene-IY40_RS13355;Name=paaA;gbkey=Gene;gene=paaA;gene_biotype=protein_coding;locus_tag=IY40_RS13355;old_locus_tag=IY40_13580 NZ_JPQY01000020.1 Protein Homology CDS 11705 12643 . - 0 ID=cds-WP_043140524.1;Parent=gene-IY40_RS13355;Dbxref=GenBank:WP_043140524.1;Name=WP_043140524.1;Ontology_term=GO:0010124,GO:0097266;gbkey=CDS;gene=paaA;go_function=phenylacetyl-CoA 1%2C2-epoxidase activity|0097266||IEA;go_process=phenylacetate catabolic process|0010124||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006326229.1;locus_tag=IY40_RS13355;product=1%2C2-phenylacetyl-CoA epoxidase subunit PaaA;protein_id=WP_043140524.1;transl_table=11 NZ_JPQY01000020.1 RefSeq gene 12961 15027 . + . ID=gene-IY40_RS13360;Name=paaZ;gbkey=Gene;gene=paaZ;gene_biotype=protein_coding;locus_tag=IY40_RS13360;old_locus_tag=IY40_13585 NZ_JPQY01000020.1 Protein Homology CDS 12961 15027 . + 0 ID=cds-WP_043140527.1;Parent=gene-IY40_RS13360;Dbxref=GenBank:WP_043140527.1;Name=WP_043140527.1;gbkey=CDS;gene=paaZ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016927196.1;locus_tag=IY40_RS13360;product=phenylacetic acid degradation bifunctional protein PaaZ;protein_id=WP_043140527.1;transl_table=11 NZ_JPQY01000020.1 RefSeq gene 15071 15964 . - . ID=gene-IY40_RS13365;Name=IY40_RS13365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS13365;old_locus_tag=IY40_13590 NZ_JPQY01000020.1 Protein Homology CDS 15071 15964 . - 0 ID=cds-WP_043140530.1;Parent=gene-IY40_RS13365;Dbxref=GenBank:WP_043140530.1;Name=WP_043140530.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019453494.1;locus_tag=IY40_RS13365;product=Kdo hydroxylase family protein;protein_id=WP_043140530.1;transl_table=11 NZ_JPQY01000020.1 RefSeq gene 16444 17997 . - . ID=gene-IY40_RS13370;Name=IY40_RS13370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS13370;old_locus_tag=IY40_13595 NZ_JPQY01000020.1 Protein Homology CDS 16444 17997 . - 0 ID=cds-WP_025303360.1;Parent=gene-IY40_RS13370;Dbxref=GenBank:WP_025303360.1;Name=WP_025303360.1;Ontology_term=GO:0005525,GO:0046872,GO:0052621;gbkey=CDS;go_function=GTP binding|0005525||IEA,metal ion binding|0046872||IEA,diguanylate cyclase activity|0052621||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019453495.1;locus_tag=IY40_RS13370;product=sensor domain-containing diguanylate cyclase;protein_id=WP_025303360.1;transl_table=11 NZ_JPQY01000020.1 RefSeq gene 18158 18352 . + . ID=gene-IY40_RS13375;Name=IY40_RS13375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS13375;old_locus_tag=IY40_13600 NZ_JPQY01000020.1 Protein Homology CDS 18158 18352 . + 0 ID=cds-WP_043140533.1;Parent=gene-IY40_RS13375;Dbxref=GenBank:WP_043140533.1;Name=WP_043140533.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006326225.1;locus_tag=IY40_RS13375;product=hypothetical protein;protein_id=WP_043140533.1;transl_table=11 NZ_JPQY01000020.1 RefSeq gene 18368 18787 . - . ID=gene-IY40_RS13380;Name=yjdN;gbkey=Gene;gene=yjdN;gene_biotype=protein_coding;locus_tag=IY40_RS13380;old_locus_tag=IY40_13605 NZ_JPQY01000020.1 Protein Homology CDS 18368 18787 . - 0 ID=cds-WP_025303359.1;Parent=gene-IY40_RS13380;Dbxref=GenBank:WP_025303359.1;Name=WP_025303359.1;gbkey=CDS;gene=yjdN;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004935154.1;locus_tag=IY40_RS13380;product=VOC family metalloprotein YjdN;protein_id=WP_025303359.1;transl_table=11 NZ_JPQY01000020.1 RefSeq gene 18964 19884 . - . ID=gene-IY40_RS13385;Name=IY40_RS13385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS13385;old_locus_tag=IY40_13610 NZ_JPQY01000020.1 Protein Homology CDS 18964 19884 . - 0 ID=cds-WP_043140536.1;Parent=gene-IY40_RS13385;Dbxref=GenBank:WP_043140536.1;Name=WP_043140536.1;Ontology_term=GO:0036104,GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;go_process=Kdo2-lipid A biosynthetic process|0036104||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004935151.1;locus_tag=IY40_RS13385;product=Kdo(2)-lipid IV(A) acyltransferase;protein_id=WP_043140536.1;transl_table=11 NZ_JPQY01000020.1 RefSeq gene 20513 20710 . + . ID=gene-IY40_RS13395;Name=IY40_RS13395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS13395;old_locus_tag=IY40_13620 NZ_JPQY01000020.1 Protein Homology CDS 20513 20710 . + 0 ID=cds-WP_025303357.1;Parent=gene-IY40_RS13395;Dbxref=GenBank:WP_025303357.1;Name=WP_025303357.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004935148.1;locus_tag=IY40_RS13395;product=glycine zipper domain-containing protein;protein_id=WP_025303357.1;transl_table=11 NZ_JPQY01000020.1 RefSeq gene 20725 20973 . + . ID=gene-IY40_RS13400;Name=IY40_RS13400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS13400;old_locus_tag=IY40_13625 NZ_JPQY01000020.1 Protein Homology CDS 20725 20973 . + 0 ID=cds-WP_004935146.1;Parent=gene-IY40_RS13400;Dbxref=GenBank:WP_004935146.1;Name=WP_004935146.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004935146.1;locus_tag=IY40_RS13400;product=GlsB/YeaQ/YmgE family stress response membrane protein;protein_id=WP_004935146.1;transl_table=11 NZ_JPQY01000020.1 RefSeq gene 21069 21458 . + . ID=gene-IY40_RS13405;Name=IY40_RS13405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS13405;old_locus_tag=IY40_13630 NZ_JPQY01000020.1 Protein Homology CDS 21069 21458 . + 0 ID=cds-WP_025303356.1;Parent=gene-IY40_RS13405;Dbxref=GenBank:WP_025303356.1;Name=WP_025303356.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016927203.1;locus_tag=IY40_RS13405;product=YidB family protein;protein_id=WP_025303356.1;transl_table=11 NZ_JPQY01000020.1 RefSeq gene 21462 22394 . - . ID=gene-IY40_RS13410;Name=IY40_RS13410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS13410;old_locus_tag=IY40_13635 NZ_JPQY01000020.1 Protein Homology CDS 21462 22394 . - 0 ID=cds-WP_043140541.1;Parent=gene-IY40_RS13410;Dbxref=GenBank:WP_043140541.1;Name=WP_043140541.1;Ontology_term=GO:0006355,GO:0001216,GO:0032993;gbkey=CDS;go_component=protein-DNA complex|0032993||IEA;go_function=DNA-binding transcription activator activity|0001216||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004935141.1;locus_tag=IY40_RS13410;product=LysR family transcriptional regulator;protein_id=WP_043140541.1;transl_table=11 NZ_JPQY01000020.1 RefSeq gene 22505 23557 . + . ID=gene-IY40_RS13415;Name=IY40_RS13415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS13415;old_locus_tag=IY40_13640 NZ_JPQY01000020.1 Protein Homology CDS 22505 23557 . + 0 ID=cds-WP_043140543.1;Parent=gene-IY40_RS13415;Dbxref=GenBank:WP_043140543.1;Name=WP_043140543.1;Ontology_term=GO:0016491,GO:0070403;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004935139.1;locus_tag=IY40_RS13415;product=SDR family oxidoreductase;protein_id=WP_043140543.1;transl_table=11 NZ_JPQY01000020.1 RefSeq gene 23602 24609 . - . ID=gene-IY40_RS13420;Name=IY40_RS13420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS13420;old_locus_tag=IY40_13645 NZ_JPQY01000020.1 Protein Homology CDS 23602 24609 . - 0 ID=cds-WP_043140545.1;Parent=gene-IY40_RS13420;Dbxref=GenBank:WP_043140545.1;Name=WP_043140545.1;Ontology_term=GO:0003960,GO:0048038,GO:0070402;gbkey=CDS;go_function=quinone reductase (NADPH) activity|0003960||IEA,quinone binding|0048038||IEA,NADPH binding|0070402||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004935136.1;locus_tag=IY40_RS13420;product=NAD(P)H-quinone oxidoreductase;protein_id=WP_043140545.1;transl_table=11 NZ_JPQY01000020.1 RefSeq gene 24763 24972 . - . ID=gene-IY40_RS13425;Name=IY40_RS13425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS13425;old_locus_tag=IY40_13650 NZ_JPQY01000020.1 Protein Homology CDS 24763 24972 . - 0 ID=cds-WP_004935132.1;Parent=gene-IY40_RS13425;Dbxref=GenBank:WP_004935132.1;Name=WP_004935132.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012145776.1;locus_tag=IY40_RS13425;product=hypothetical protein;protein_id=WP_004935132.1;transl_table=11 NZ_JPQY01000020.1 RefSeq gene 25485 25862 . - . ID=gene-IY40_RS25300;Name=IY40_RS25300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS25300 NZ_JPQY01000020.1 Protein Homology CDS 25485 25862 . - 0 ID=cds-WP_025303352.1;Parent=gene-IY40_RS25300;Dbxref=GenBank:WP_025303352.1;Name=WP_025303352.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015378337.1;locus_tag=IY40_RS25300;product=hypothetical protein;protein_id=WP_025303352.1;transl_table=11 NZ_JPQY01000020.1 RefSeq gene 26238 26450 . + . ID=gene-IY40_RS13435;Name=cspE;gbkey=Gene;gene=cspE;gene_biotype=protein_coding;gene_synonym=gicA,msmC;locus_tag=IY40_RS13435;old_locus_tag=IY40_13660 NZ_JPQY01000020.1 Protein Homology CDS 26238 26450 . + 0 ID=cds-WP_004935122.1;Parent=gene-IY40_RS13435;Dbxref=GenBank:WP_004935122.1;Name=WP_004935122.1;Ontology_term=GO:0031564,GO:0001072,GO:0003697,GO:0003723;gbkey=CDS;gene=cspE;go_function=transcription antitermination factor activity%2C RNA binding|0001072||IEA,single-stranded DNA binding|0003697||IEA,RNA binding|0003723||IEA;go_process=transcription antitermination|0031564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004935122.1;locus_tag=IY40_RS13435;product=transcription antiterminator/RNA stability regulator CspE;protein_id=WP_004935122.1;transl_table=11 NZ_JPQY01000020.1 RefSeq gene 26767 26967 . + . ID=gene-IY40_RS13440;Name=dsrB;gbkey=Gene;gene=dsrB;gene_biotype=protein_coding;locus_tag=IY40_RS13440;old_locus_tag=IY40_13665 NZ_JPQY01000020.1 Protein Homology CDS 26767 26967 . + 0 ID=cds-WP_004935117.1;Parent=gene-IY40_RS13440;Dbxref=GenBank:WP_004935117.1;Name=WP_004935117.1;gbkey=CDS;gene=dsrB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004935117.1;locus_tag=IY40_RS13440;product=protein DsrB;protein_id=WP_004935117.1;transl_table=11 NZ_JPQY01000020.1 RefSeq gene 27185 27814 . - . ID=gene-IY40_RS13445;Name=rcsA;gbkey=Gene;gene=rcsA;gene_biotype=protein_coding;locus_tag=IY40_RS13445;old_locus_tag=IY40_13670 NZ_JPQY01000020.1 Protein Homology CDS 27185 27814 . - 0 ID=cds-WP_025303351.1;Parent=gene-IY40_RS13445;Dbxref=GenBank:WP_025303351.1;Name=WP_025303351.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=rcsA;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012145772.1;locus_tag=IY40_RS13445;product=transcriptional regulator RcsA;protein_id=WP_025303351.1;transl_table=11 NZ_JPQY01000020.1 RefSeq gene 28610 29251 . + . ID=gene-IY40_RS13455;Name=IY40_RS13455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS13455;old_locus_tag=IY40_13685 NZ_JPQY01000020.1 Protein Homology CDS 28610 29251 . + 0 ID=cds-WP_080287135.1;Parent=gene-IY40_RS13455;Dbxref=GenBank:WP_080287135.1;Name=WP_080287135.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016927209.1;locus_tag=IY40_RS13455;product=GNAT family N-acetyltransferase;protein_id=WP_080287135.1;transl_table=11 NZ_JPQY01000020.1 RefSeq gene 29264 30679 . - . ID=gene-IY40_RS13460;Name=IY40_RS13460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS13460;old_locus_tag=IY40_13690 NZ_JPQY01000020.1 Protein Homology CDS 29264 30679 . - 0 ID=cds-WP_043140600.1;Parent=gene-IY40_RS13460;Dbxref=GenBank:WP_043140600.1;Name=WP_043140600.1;Ontology_term=GO:0019752,GO:0016830,GO:0030170;gbkey=CDS;go_function=carbon-carbon lyase activity|0016830||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=carboxylic acid metabolic process|0019752||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015378335.1;locus_tag=IY40_RS13460;product=pyridoxal phosphate-dependent decarboxylase family protein;protein_id=WP_043140600.1;transl_table=11 NZ_JPQY01000020.1 RefSeq gene 30781 31656 . + . ID=gene-IY40_RS13465;Name=IY40_RS13465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS13465;old_locus_tag=IY40_13695 NZ_JPQY01000020.1 Protein Homology CDS 30781 31656 . + 0 ID=cds-WP_043140557.1;Parent=gene-IY40_RS13465;Dbxref=GenBank:WP_043140557.1;Name=WP_043140557.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004935106.1;locus_tag=IY40_RS13465;product=LysR substrate-binding domain-containing protein;protein_id=WP_043140557.1;transl_table=11 NZ_JPQY01000020.1 RefSeq gene 31653 33038 . - . ID=gene-IY40_RS13470;Name=IY40_RS13470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS13470;old_locus_tag=IY40_13700 NZ_JPQY01000020.1 Protein Homology CDS 31653 33038 . - 0 ID=cds-WP_043140560.1;Parent=gene-IY40_RS13470;Dbxref=GenBank:WP_043140560.1;Name=WP_043140560.1;Ontology_term=GO:0003824,GO:0008410;gbkey=CDS;go_function=catalytic activity|0003824||IEA,CoA-transferase activity|0008410||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004935103.1;locus_tag=IY40_RS13470;product=CoA transferase;protein_id=WP_043140560.1;transl_table=11 NZ_JPQY01000020.1 RefSeq gene 33763 34461 . + . ID=gene-IY40_RS13475;Name=IY40_RS13475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS13475;old_locus_tag=IY40_13705 NZ_JPQY01000020.1 Protein Homology CDS 33763 34461 . + 0 ID=cds-WP_025303346.1;Parent=gene-IY40_RS13475;Dbxref=GenBank:WP_025303346.1;Name=WP_025303346.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019080867.1;locus_tag=IY40_RS13475;product=MgtC family protein;protein_id=WP_025303346.1;transl_table=11 NZ_JPQY01000020.1 RefSeq gene 34703 37402 . + . ID=gene-IY40_RS13480;Name=mgtA;gbkey=Gene;gene=mgtA;gene_biotype=protein_coding;locus_tag=IY40_RS13480;old_locus_tag=IY40_13710 NZ_JPQY01000020.1 Protein Homology CDS 34703 37402 . + 0 ID=cds-WP_043140563.1;Parent=gene-IY40_RS13480;Dbxref=GenBank:WP_043140563.1;Name=WP_043140563.1;Ontology_term=GO:0015693,GO:0015444,GO:0016020;gbkey=CDS;gene=mgtA;go_component=membrane|0016020||IEA;go_function=P-type magnesium transporter activity|0015444||IEA;go_process=magnesium ion transport|0015693||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006326195.1;locus_tag=IY40_RS13480;product=magnesium-translocating P-type ATPase;protein_id=WP_043140563.1;transl_table=11 NZ_JPQY01000020.1 RefSeq gene 37451 38224 . - . ID=gene-IY40_RS13485;Name=IY40_RS13485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS13485;old_locus_tag=IY40_13715 NZ_JPQY01000020.1 Protein Homology CDS 37451 38224 . - 0 ID=cds-WP_025303344.1;Parent=gene-IY40_RS13485;Dbxref=GenBank:WP_025303344.1;Name=WP_025303344.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019453518.1;locus_tag=IY40_RS13485;product=DUF3307 domain-containing protein;protein_id=WP_025303344.1;transl_table=11 NZ_JPQY01000020.1 RefSeq gene 38227 38823 . - . ID=gene-IY40_RS13490;Name=IY40_RS13490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS13490;old_locus_tag=IY40_13720 NZ_JPQY01000020.1 Protein Homology CDS 38227 38823 . - 0 ID=cds-WP_025303343.1;Parent=gene-IY40_RS13490;Dbxref=GenBank:WP_025303343.1;Name=WP_025303343.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019453519.1;locus_tag=IY40_RS13490;product=hypothetical protein;protein_id=WP_025303343.1;transl_table=11 NZ_JPQY01000020.1 RefSeq gene 39036 39215 . - . ID=gene-IY40_RS13495;Name=IY40_RS13495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS13495;old_locus_tag=IY40_13725 NZ_JPQY01000020.1 Protein Homology CDS 39036 39215 . - 0 ID=cds-WP_019453520.1;Parent=gene-IY40_RS13495;Dbxref=GenBank:WP_019453520.1;Name=WP_019453520.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019453520.1;locus_tag=IY40_RS13495;product=hypothetical protein;protein_id=WP_019453520.1;transl_table=11 NZ_JPQY01000020.1 RefSeq gene 39311 40420 . - . ID=gene-IY40_RS13500;Name=IY40_RS13500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS13500;old_locus_tag=IY40_13730 NZ_JPQY01000020.1 Protein Homology CDS 39311 40420 . - 0 ID=cds-WP_043140567.1;Parent=gene-IY40_RS13500;Dbxref=GenBank:WP_043140567.1;Name=WP_043140567.1;Ontology_term=GO:0016879;gbkey=CDS;go_function=ligase activity%2C forming carbon-nitrogen bonds|0016879||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016927218.1;locus_tag=IY40_RS13500;product=YbdK family carboxylate-amine ligase;protein_id=WP_043140567.1;transl_table=11 NZ_JPQY01000020.1 RefSeq gene 40572 40898 . + . ID=gene-IY40_RS13505;Name=IY40_RS13505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS13505;old_locus_tag=IY40_13735 NZ_JPQY01000020.1 Protein Homology CDS 40572 40898 . + 0 ID=cds-WP_025303341.1;Parent=gene-IY40_RS13505;Dbxref=GenBank:WP_025303341.1;Name=WP_025303341.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016927219.1;locus_tag=IY40_RS13505;product=metalloregulator ArsR/SmtB family transcription factor;protein_id=WP_025303341.1;transl_table=11 NZ_JPQY01000020.1 RefSeq gene 40969 42258 . + . ID=gene-IY40_RS13510;Name=IY40_RS13510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS13510;old_locus_tag=IY40_13740 NZ_JPQY01000020.1 Protein Homology CDS 40969 42258 . + 0 ID=cds-WP_043140570.1;Parent=gene-IY40_RS13510;Dbxref=GenBank:WP_043140570.1;Name=WP_043140570.1;Ontology_term=GO:0046685,GO:0015105,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=arsenite transmembrane transporter activity|0015105||IEA;go_process=response to arsenic-containing substance|0046685||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008783806.1;locus_tag=IY40_RS13510;product=arsenic transporter;protein_id=WP_043140570.1;transl_table=11 NZ_JPQY01000020.1 RefSeq gene 42273 42704 . + . ID=gene-IY40_RS13515;Name=arsC;gbkey=Gene;gene=arsC;gene_biotype=protein_coding;locus_tag=IY40_RS13515;old_locus_tag=IY40_13745 NZ_JPQY01000020.1 Protein Homology CDS 42273 42704 . + 0 ID=cds-WP_025303339.1;Parent=gene-IY40_RS13515;Dbxref=GenBank:WP_025303339.1;Name=WP_025303339.1;Ontology_term=GO:0008794;gbkey=CDS;gene=arsC;go_function=arsenate reductase (glutaredoxin) activity|0008794||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015378326.1;locus_tag=IY40_RS13515;product=glutaredoxin-dependent arsenate reductase;protein_id=WP_025303339.1;transl_table=11 NZ_JPQY01000020.1 RefSeq gene 42731 43693 . - . ID=gene-IY40_RS13520;Name=IY40_RS13520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS13520;old_locus_tag=IY40_13750 NZ_JPQY01000020.1 Protein Homology CDS 42731 43693 . - 0 ID=cds-WP_025303338.1;Parent=gene-IY40_RS13520;Dbxref=GenBank:WP_025303338.1;Name=WP_025303338.1;Ontology_term=GO:0004601,GO:0020037;gbkey=CDS;go_function=peroxidase activity|0004601||IEA,heme binding|0020037||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019453524.1;locus_tag=IY40_RS13520;product=Dyp-type peroxidase;protein_id=WP_025303338.1;transl_table=11 NZ_JPQY01000020.1 RefSeq gene 43728 44645 . - . ID=gene-IY40_RS13525;Name=IY40_RS13525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS13525;old_locus_tag=IY40_13755 NZ_JPQY01000020.1 Protein Homology CDS 43728 44645 . - 0 ID=cds-WP_043140574.1;Parent=gene-IY40_RS13525;Dbxref=GenBank:WP_043140574.1;Name=WP_043140574.1;Ontology_term=GO:0005254;gbkey=CDS;go_function=chloride channel activity|0005254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016927223.1;locus_tag=IY40_RS13525;product=bestrophin family protein;protein_id=WP_043140574.1;transl_table=11 NZ_JPQY01000020.1 RefSeq gene 44704 45546 . - . ID=gene-IY40_RS13530;Name=fdhD;gbkey=Gene;gene=fdhD;gene_biotype=protein_coding;locus_tag=IY40_RS13530;old_locus_tag=IY40_13760 NZ_JPQY01000020.1 Protein Homology CDS 44704 45546 . - 0 ID=cds-WP_043140577.1;Parent=gene-IY40_RS13530;Dbxref=GenBank:WP_043140577.1;Name=WP_043140577.1;Ontology_term=GO:0009061,GO:0015942,GO:0016783,GO:0009326;gbkey=CDS;gene=fdhD;go_component=formate dehydrogenase complex|0009326||IEA;go_function=sulfurtransferase activity|0016783||IEA;go_process=anaerobic respiration|0009061||IEA,formate metabolic process|0015942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015378311.1;locus_tag=IY40_RS13530;product=formate dehydrogenase accessory sulfurtransferase FdhD;protein_id=WP_043140577.1;transl_table=11 NZ_JPQY01000020.1 RefSeq gene 46417 47361 . + . ID=gene-IY40_RS13535;Name=IY40_RS13535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS13535;old_locus_tag=IY40_13765 NZ_JPQY01000020.1 GeneMarkS-2+ CDS 46417 47361 . + 0 ID=cds-WP_043140580.1;Parent=gene-IY40_RS13535;Dbxref=GenBank:WP_043140580.1;Name=WP_043140580.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IY40_RS13535;product=alpha/beta hydrolase family protein;protein_id=WP_043140580.1;transl_table=11 NZ_JPQY01000020.1 RefSeq gene 47640 48581 . + . ID=gene-IY40_RS13540;Name=IY40_RS13540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS13540 NZ_JPQY01000020.1 Protein Homology CDS 47640 48581 . + 0 ID=cds-WP_025303334.1;Parent=gene-IY40_RS13540;Dbxref=GenBank:WP_025303334.1;Name=WP_025303334.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010670300.1;locus_tag=IY40_RS13540;product=LysR family transcriptional regulator;protein_id=WP_025303334.1;transl_table=11 NZ_JPQY01000020.1 RefSeq pseudogene 48850 49035 . + . ID=gene-IY40_RS25305;Name=IY40_RS25305;end_range=49035,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IY40_RS25305;partial=true;pseudo=true NZ_JPQY01000020.1 Protein Homology CDS 48850 49035 . + 0 ID=cds-IY40_RS25305;Parent=gene-IY40_RS25305;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=49035,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015378308.1;locus_tag=IY40_RS25305;partial=true;product=DNA polymerase V;pseudo=true;transl_table=11 NZ_JPQY01000020.1 RefSeq gene 49050 49295 . + . ID=gene-IY40_RS13545;Name=IY40_RS13545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS13545;old_locus_tag=IY40_13775 NZ_JPQY01000020.1 Protein Homology CDS 49050 49295 . + 0 ID=cds-WP_025303333.1;Parent=gene-IY40_RS13545;Dbxref=GenBank:WP_025303333.1;Name=WP_025303333.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016927225.1;locus_tag=IY40_RS13545;product=hypothetical protein;protein_id=WP_025303333.1;transl_table=11 NZ_JPQY01000020.1 RefSeq pseudogene 49380 49835 . + . ID=gene-IY40_RS13550;Name=IY40_RS13550;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IY40_RS13550;partial=true;pseudo=true;start_range=.,49380 NZ_JPQY01000020.1 Protein Homology CDS 49380 49835 . + 0 ID=cds-IY40_RS13550;Parent=gene-IY40_RS13550;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001722340.1;locus_tag=IY40_RS13550;partial=true;product=recombinase family protein;pseudo=true;start_range=.,49380;transl_table=11 NZ_JPQY01000020.1 RefSeq gene 49911 50282 . + . ID=gene-IY40_RS25990;Name=IY40_RS25990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS25990 NZ_JPQY01000020.1 GeneMarkS-2+ CDS 49911 50282 . + 0 ID=cds-WP_152561305.1;Parent=gene-IY40_RS25990;Dbxref=GenBank:WP_152561305.1;Name=WP_152561305.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IY40_RS25990;product=hypothetical protein;protein_id=WP_152561305.1;transl_table=11 NZ_JPQY01000020.1 RefSeq pseudogene 50596 50775 . + . ID=gene-IY40_RS26680;Name=IY40_RS26680;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IY40_RS26680;partial=true;pseudo=true;start_range=.,50596 NZ_JPQY01000020.1 Protein Homology CDS 50596 50775 . + 0 ID=cds-IY40_RS26680;Parent=gene-IY40_RS26680;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_025160380.1;locus_tag=IY40_RS26680;partial=true;product=SOS response-associated peptidase family protein;pseudo=true;start_range=.,50596;transl_table=11 NZ_JPQY01000020.1 RefSeq gene 50969 51397 . + . ID=gene-IY40_RS13555;Name=umuD;gbkey=Gene;gene=umuD;gene_biotype=protein_coding;locus_tag=IY40_RS13555;old_locus_tag=IY40_13785 NZ_JPQY01000020.1 Protein Homology CDS 50969 51397 . + 0 ID=cds-WP_049209475.1;Parent=gene-IY40_RS13555;Dbxref=GenBank:WP_049209475.1;Name=WP_049209475.1;Ontology_term=GO:0003677;gbkey=CDS;gene=umuD;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015378308.1;locus_tag=IY40_RS13555;product=translesion error-prone DNA polymerase V autoproteolytic subunit;protein_id=WP_049209475.1;transl_table=11 NZ_JPQY01000020.1 RefSeq pseudogene 51494 54030 . + . ID=gene-IY40_RS13560;Name=IY40_RS13560;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IY40_RS13560;old_locus_tag=IY40_13790;pseudo=true NZ_JPQY01000020.1 Protein Homology CDS 51494 54030 . + 0 ID=cds-IY40_RS13560;Parent=gene-IY40_RS13560;Note=frameshifted;Ontology_term=GO:0055085,GO:0022857,GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015842279.1;locus_tag=IY40_RS13560;product=TonB-dependent hemoglobin/transferrin/lactoferrin family receptor;pseudo=true;transl_table=11 NZ_JPQY01000020.1 RefSeq gene 54199 54711 . + . ID=gene-IY40_RS13565;Name=IY40_RS13565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS13565;old_locus_tag=IY40_13795 NZ_JPQY01000020.1 Protein Homology CDS 54199 54711 . + 0 ID=cds-WP_025303329.1;Parent=gene-IY40_RS13565;Dbxref=GenBank:WP_025303329.1;Name=WP_025303329.1;Ontology_term=GO:0006352,GO:0006355,GO:0003700,GO:0016987;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011091702.1;locus_tag=IY40_RS13565;product=sigma-70 family RNA polymerase sigma factor;protein_id=WP_025303329.1;transl_table=11 NZ_JPQY01000020.1 RefSeq gene 54729 55646 . + . ID=gene-IY40_RS13570;Name=IY40_RS13570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS13570;old_locus_tag=IY40_13800 NZ_JPQY01000020.1 Protein Homology CDS 54729 55646 . + 0 ID=cds-WP_038629539.1;Parent=gene-IY40_RS13570;Dbxref=GenBank:WP_038629539.1;Name=WP_038629539.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016648.6;locus_tag=IY40_RS13570;product=FecR domain-containing protein;protein_id=WP_038629539.1;transl_table=11 NZ_JPQY01000020.1 RefSeq gene 55942 56628 . + . ID=gene-IY40_RS13575;Name=IY40_RS13575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS13575 NZ_JPQY01000020.1 Protein Homology CDS 55942 56628 . + 0 ID=cds-WP_160310833.1;Parent=gene-IY40_RS13575;Dbxref=GenBank:WP_160310833.1;Name=WP_160310833.1;Ontology_term=GO:0015031,GO:0015891,GO:0055085,GO:0031992,GO:0030288;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=energy transducer activity|0031992||IEA;go_process=protein transport|0015031||IEA,siderophore transport|0015891||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:TIGR01352.1;locus_tag=IY40_RS13575;product=energy transducer TonB;protein_id=WP_160310833.1;transl_table=11 NZ_JPQY01000020.1 RefSeq pseudogene 56834 56935 . + . ID=gene-IY40_RS13580;Name=IY40_RS13580;end_range=56935,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IY40_RS13580;old_locus_tag=IY40_13810;partial=true;pseudo=true NZ_JPQY01000020.1 Protein Homology CDS 56834 56935 . + 0 ID=cds-IY40_RS13580;Parent=gene-IY40_RS13580;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006281;end_range=56935,.;gbkey=CDS;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019105726.1;locus_tag=IY40_RS13580;partial=true;product=Y-family DNA polymerase;pseudo=true;transl_table=11 NZ_JPQY01000020.1 RefSeq gene 57008 58165 . + . ID=gene-IY40_RS13585;Name=IY40_RS13585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS13585;old_locus_tag=IY40_13815 NZ_JPQY01000020.1 Protein Homology CDS 57008 58165 . + 0 ID=cds-WP_043140592.1;Parent=gene-IY40_RS13585;Dbxref=GenBank:WP_043140592.1;Name=WP_043140592.1;Ontology_term=GO:0006310,GO:0009009;gbkey=CDS;go_function=site-specific recombinase activity|0009009||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001241518.1;locus_tag=IY40_RS13585;product=tyrosine-type recombinase/integrase;protein_id=WP_043140592.1;transl_table=11 NZ_JPQY01000020.1 RefSeq gene 58176 59786 . + . ID=gene-IY40_RS13590;Name=IY40_RS13590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS13590;old_locus_tag=IY40_13820 NZ_JPQY01000020.1 Protein Homology CDS 58176 59786 . + 0 ID=cds-WP_043140596.1;Parent=gene-IY40_RS13590;Dbxref=GenBank:WP_043140596.1;Name=WP_043140596.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000101488.1;locus_tag=IY40_RS13590;product=hypothetical protein;protein_id=WP_043140596.1;transl_table=11 NZ_JPQY01000020.1 RefSeq gene 59807 61630 . + . ID=gene-IY40_RS26385;Name=IY40_RS26385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS26385 NZ_JPQY01000020.1 Protein Homology CDS 59807 61630 . + 0 ID=cds-WP_200877947.1;Parent=gene-IY40_RS26385;Dbxref=GenBank:WP_200877947.1;Name=WP_200877947.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000910068.1;locus_tag=IY40_RS26385;product=tyrosine-type recombinase/integrase;protein_id=WP_200877947.1;transl_table=11 NZ_JPQY01000020.1 RefSeq gene 61620 62033 . + . ID=gene-IY40_RS13600;Name=IY40_RS13600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS13600;old_locus_tag=IY40_13835 NZ_JPQY01000020.1 Protein Homology CDS 61620 62033 . + 0 ID=cds-WP_200877948.1;Parent=gene-IY40_RS13600;Dbxref=GenBank:WP_200877948.1;Name=WP_200877948.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004883302.1;locus_tag=IY40_RS13600;product=TetR family transcriptional regulator;protein_id=WP_200877948.1;transl_table=11 NZ_JPQY01000020.1 RefSeq gene 62266 63063 . + . ID=gene-IY40_RS25310;Name=IY40_RS25310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS25310 NZ_JPQY01000020.1 Protein Homology CDS 62266 63063 . + 0 ID=cds-WP_235211376.1;Parent=gene-IY40_RS25310;Dbxref=GenBank:WP_235211376.1;Name=WP_235211376.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013512493.1;locus_tag=IY40_RS25310;product=hypothetical protein;protein_id=WP_235211376.1;transl_table=11 NZ_JPQY01000020.1 RefSeq gene 63120 63416 . - . ID=gene-IY40_RS13605;Name=IY40_RS13605;end_range=63416,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS13605;old_locus_tag=IY40_13845;partial=true NZ_JPQY01000020.1 Protein Homology CDS 63120 63416 . - 0 ID=cds-WP_152561307.1;Parent=gene-IY40_RS13605;Dbxref=GenBank:WP_152561307.1;Name=WP_152561307.1;end_range=63416,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_047389784.1;locus_tag=IY40_RS13605;partial=true;product=DDE-type integrase/transposase/recombinase;protein_id=WP_152561307.1;transl_table=11 ##sequence-region NZ_JPQY01000021.1 1 21453 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=615 NZ_JPQY01000021.1 RefSeq region 1 21453 . + . ID=NZ_JPQY01000021.1:1..21453;Dbxref=taxon:615;collected-by=Mahloro H. Serepa%3B Vincent M. Gray;collection-date=2013-04-11;country=South Africa: North West Province;gbkey=Src;genome=genomic;identified-by=Mahloro H. Serepa%3B Vincent M. Gray;isolation-source=entomopathogenic nematode Oscheius sp. MCB living in soil;mol_type=genomic DNA;nat-host=Oscheius sp. MCB;strain=MCB NZ_JPQY01000021.1 RefSeq gene 1 431 . + . ID=gene-IY40_RS13610;Name=pyrF;gbkey=Gene;gene=pyrF;gene_biotype=protein_coding;locus_tag=IY40_RS13610;old_locus_tag=IY40_13850;partial=true;start_range=.,1 NZ_JPQY01000021.1 Protein Homology CDS 1 431 . + 2 ID=cds-WP_043140629.1;Parent=gene-IY40_RS13610;Dbxref=GenBank:WP_043140629.1;Name=WP_043140629.1;Ontology_term=GO:0044205,GO:0004590;gbkey=CDS;gene=pyrF;go_function=orotidine-5'-phosphate decarboxylase activity|0004590||IEA;go_process='de novo' UMP biosynthetic process|0044205||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017893016.1;locus_tag=IY40_RS13610;partial=true;product=orotidine-5'-phosphate decarboxylase;protein_id=WP_043140629.1;start_range=.,1;transl_table=11 NZ_JPQY01000021.1 RefSeq gene 442 768 . + . ID=gene-IY40_RS13615;Name=yciH;gbkey=Gene;gene=yciH;gene_biotype=protein_coding;locus_tag=IY40_RS13615;old_locus_tag=IY40_13855 NZ_JPQY01000021.1 Protein Homology CDS 442 768 . + 0 ID=cds-WP_025303019.1;Parent=gene-IY40_RS13615;Dbxref=GenBank:WP_025303019.1;Name=WP_025303019.1;gbkey=CDS;gene=yciH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013318309.1;locus_tag=IY40_RS13615;product=stress response translation initiation inhibitor YciH;protein_id=WP_025303019.1;transl_table=11 NZ_JPQY01000021.1 RefSeq gene 959 1177 . - . ID=gene-IY40_RS13620;Name=osmB;gbkey=Gene;gene=osmB;gene_biotype=protein_coding;locus_tag=IY40_RS13620;old_locus_tag=IY40_13860 NZ_JPQY01000021.1 Protein Homology CDS 959 1177 . - 0 ID=cds-WP_004945176.1;Parent=gene-IY40_RS13620;Dbxref=GenBank:WP_004945176.1;Name=WP_004945176.1;gbkey=CDS;gene=osmB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210611.1;locus_tag=IY40_RS13620;product=osmotically-inducible lipoprotein OsmB;protein_id=WP_004945176.1;transl_table=11 NZ_JPQY01000021.1 RefSeq gene 1458 2204 . - . ID=gene-IY40_RS13625;Name=IY40_RS13625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS13625;old_locus_tag=IY40_13865 NZ_JPQY01000021.1 Protein Homology CDS 1458 2204 . - 0 ID=cds-WP_004930631.1;Parent=gene-IY40_RS13625;Dbxref=GenBank:WP_004930631.1;Name=WP_004930631.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004930631.1;locus_tag=IY40_RS13625;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_004930631.1;transl_table=11 NZ_JPQY01000021.1 RefSeq gene 2255 4687 . - . ID=gene-IY40_RS13630;Name=IY40_RS13630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS13630;old_locus_tag=IY40_13870 NZ_JPQY01000021.1 Protein Homology CDS 2255 4687 . - 0 ID=cds-WP_043140649.1;Parent=gene-IY40_RS13630;Dbxref=GenBank:WP_043140649.1;Name=WP_043140649.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706700.1;locus_tag=IY40_RS13630;product=formate C-acetyltransferase/glycerol dehydratase family glycyl radical enzyme;protein_id=WP_043140649.1;transl_table=11 NZ_JPQY01000021.1 RefSeq gene 4692 5591 . - . ID=gene-IY40_RS13635;Name=IY40_RS13635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS13635;old_locus_tag=IY40_13875 NZ_JPQY01000021.1 Protein Homology CDS 4692 5591 . - 0 ID=cds-WP_043140652.1;Parent=gene-IY40_RS13635;Dbxref=GenBank:WP_043140652.1;Name=WP_043140652.1;Ontology_term=GO:0043687,GO:0051539,GO:1904047;gbkey=CDS;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=post-translational protein modification|0043687||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005156920.1;locus_tag=IY40_RS13635;product=glycyl-radical enzyme activating protein;protein_id=WP_043140652.1;transl_table=11 NZ_JPQY01000021.1 RefSeq gene 5741 6406 . + . ID=gene-IY40_RS13640;Name=fsa;gbkey=Gene;gene=fsa;gene_biotype=protein_coding;locus_tag=IY40_RS13640;old_locus_tag=IY40_13880 NZ_JPQY01000021.1 Protein Homology CDS 5741 6406 . + 0 ID=cds-WP_043140654.1;Parent=gene-IY40_RS13640;Dbxref=GenBank:WP_043140654.1;Name=WP_043140654.1;Ontology_term=GO:0005975,GO:0016832;gbkey=CDS;gene=fsa;go_function=aldehyde-lyase activity|0016832||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004930615.1;locus_tag=IY40_RS13640;product=fructose-6-phosphate aldolase;protein_id=WP_043140654.1;transl_table=11 NZ_JPQY01000021.1 RefSeq gene 6455 8521 . - . ID=gene-IY40_RS13645;Name=IY40_RS13645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS13645;old_locus_tag=IY40_13885 NZ_JPQY01000021.1 Protein Homology CDS 6455 8521 . - 0 ID=cds-WP_025303016.1;Parent=gene-IY40_RS13645;Dbxref=GenBank:WP_025303016.1;Name=WP_025303016.1;Ontology_term=GO:0009267,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=cellular response to starvation|0009267||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192451.1;locus_tag=IY40_RS13645;product=carbon starvation CstA family protein;protein_id=WP_025303016.1;transl_table=11 NZ_JPQY01000021.1 RefSeq gene 8907 10070 . + . ID=gene-IY40_RS13650;Name=IY40_RS13650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS13650;old_locus_tag=IY40_13890 NZ_JPQY01000021.1 Protein Homology CDS 8907 10070 . + 0 ID=cds-WP_043140659.1;Parent=gene-IY40_RS13650;Dbxref=GenBank:WP_043140659.1;Name=WP_043140659.1;Ontology_term=GO:0016787,GO:0016810;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020240716.1;locus_tag=IY40_RS13650;product=M20 aminoacylase family protein;protein_id=WP_043140659.1;transl_table=11 NZ_JPQY01000021.1 RefSeq gene 10101 11411 . + . ID=gene-IY40_RS13655;Name=IY40_RS13655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS13655;old_locus_tag=IY40_13895 NZ_JPQY01000021.1 Protein Homology CDS 10101 11411 . + 0 ID=cds-WP_043140662.1;Parent=gene-IY40_RS13655;Dbxref=GenBank:WP_043140662.1;Name=WP_043140662.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015378025.1;locus_tag=IY40_RS13655;product=MFS transporter;protein_id=WP_043140662.1;transl_table=11 NZ_JPQY01000021.1 RefSeq gene 11477 13411 . - . ID=gene-IY40_RS13660;Name=IY40_RS13660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS13660;old_locus_tag=IY40_13900 NZ_JPQY01000021.1 Protein Homology CDS 11477 13411 . - 0 ID=cds-WP_043140667.1;Parent=gene-IY40_RS13660;Dbxref=GenBank:WP_043140667.1;Name=WP_043140667.1;Ontology_term=GO:0006401,GO:0003723,GO:0008859;gbkey=CDS;go_function=RNA binding|0003723||IEA,exoribonuclease II activity|0008859||IEA;go_process=RNA catabolic process|0006401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015840571.1;locus_tag=IY40_RS13660;product=exoribonuclease II;protein_id=WP_043140667.1;transl_table=11 NZ_JPQY01000021.1 RefSeq gene 13599 14126 . - . ID=gene-IY40_RS13665;Name=gloA;gbkey=Gene;gene=gloA;gene_biotype=protein_coding;locus_tag=IY40_RS13665;old_locus_tag=IY40_13905 NZ_JPQY01000021.1 Protein Homology CDS 13599 14126 . - 0 ID=cds-WP_025303012.1;Parent=gene-IY40_RS13665;Dbxref=GenBank:WP_025303012.1;Name=WP_025303012.1;Ontology_term=GO:0051596,GO:0004462,GO:0046872;gbkey=CDS;gene=gloA;go_function=lactoylglutathione lyase activity|0004462||IEA,metal ion binding|0046872||IEA;go_process=methylglyoxal catabolic process|0051596||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016927543.1;locus_tag=IY40_RS13665;product=lactoylglutathione lyase;protein_id=WP_025303012.1;transl_table=11 NZ_JPQY01000021.1 RefSeq gene 14226 15080 . + . ID=gene-IY40_RS13670;Name=IY40_RS13670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS13670;old_locus_tag=IY40_13910 NZ_JPQY01000021.1 Protein Homology CDS 14226 15080 . + 0 ID=cds-WP_043140670.1;Parent=gene-IY40_RS13670;Dbxref=GenBank:WP_043140670.1;Name=WP_043140670.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019452680.1;locus_tag=IY40_RS13670;product=LysR family transcriptional regulator;protein_id=WP_043140670.1;transl_table=11 NZ_JPQY01000021.1 RefSeq gene 15096 17402 . - . ID=gene-IY40_RS13675;Name=IY40_RS13675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS13675;old_locus_tag=IY40_13915 NZ_JPQY01000021.1 Protein Homology CDS 15096 17402 . - 0 ID=cds-WP_025303010.1;Parent=gene-IY40_RS13675;Dbxref=GenBank:WP_025303010.1;Name=WP_025303010.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019083155.1;locus_tag=IY40_RS13675;product=FdhF/YdeP family oxidoreductase;protein_id=WP_025303010.1;transl_table=11 NZ_JPQY01000021.1 RefSeq gene 17685 18854 . + . ID=gene-IY40_RS13680;Name=dacD;gbkey=Gene;gene=dacD;gene_biotype=protein_coding;locus_tag=IY40_RS13680;old_locus_tag=IY40_13920 NZ_JPQY01000021.1 Protein Homology CDS 17685 18854 . + 0 ID=cds-WP_043140675.1;Parent=gene-IY40_RS13680;Dbxref=GenBank:WP_043140675.1;Name=WP_043140675.1;Ontology_term=GO:0006508,GO:0009002;gbkey=CDS;gene=dacD;go_function=serine-type D-Ala-D-Ala carboxypeptidase activity|0009002||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006325670.1;locus_tag=IY40_RS13680;product=serine-type D-Ala-D-Ala carboxypeptidase DacD;protein_id=WP_043140675.1;transl_table=11 NZ_JPQY01000021.1 RefSeq gene 18919 19824 . + . ID=gene-IY40_RS13685;Name=IY40_RS13685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS13685;old_locus_tag=IY40_13925 NZ_JPQY01000021.1 Protein Homology CDS 18919 19824 . + 0 ID=cds-WP_043140678.1;Parent=gene-IY40_RS13685;Dbxref=GenBank:WP_043140678.1;Name=WP_043140678.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004938338.1;locus_tag=IY40_RS13685;product=LysR family transcriptional regulator;protein_id=WP_043140678.1;transl_table=11 NZ_JPQY01000021.1 RefSeq gene 19868 21052 . - . ID=gene-IY40_RS13690;Name=IY40_RS13690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS13690;old_locus_tag=IY40_13930 NZ_JPQY01000021.1 Protein Homology CDS 19868 21052 . - 0 ID=cds-WP_025303007.1;Parent=gene-IY40_RS13690;Dbxref=GenBank:WP_025303007.1;Name=WP_025303007.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019452676.1;locus_tag=IY40_RS13690;product=CMD domain-containing protein;protein_id=WP_025303007.1;transl_table=11 ##sequence-region NZ_JPQY01000022.1 1 157248 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=615 NZ_JPQY01000022.1 RefSeq region 1 157248 . + . ID=NZ_JPQY01000022.1:1..157248;Dbxref=taxon:615;collected-by=Mahloro H. Serepa%3B Vincent M. Gray;collection-date=2013-04-11;country=South Africa: North West Province;gbkey=Src;genome=genomic;identified-by=Mahloro H. Serepa%3B Vincent M. Gray;isolation-source=entomopathogenic nematode Oscheius sp. MCB living in soil;mol_type=genomic DNA;nat-host=Oscheius sp. MCB;strain=MCB NZ_JPQY01000022.1 RefSeq gene 237 926 . + . ID=gene-IY40_RS13700;Name=IY40_RS13700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS13700;old_locus_tag=IY40_13940 NZ_JPQY01000022.1 Protein Homology CDS 237 926 . + 0 ID=cds-WP_033636503.1;Parent=gene-IY40_RS13700;Dbxref=GenBank:WP_033636503.1;Name=WP_033636503.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002215905.1;locus_tag=IY40_RS13700;product=FadR/GntR family transcriptional regulator;protein_id=WP_033636503.1;transl_table=11 NZ_JPQY01000022.1 RefSeq gene 993 2408 . + . ID=gene-IY40_RS13705;Name=mdtD;gbkey=Gene;gene=mdtD;gene_biotype=protein_coding;locus_tag=IY40_RS13705;old_locus_tag=IY40_13945 NZ_JPQY01000022.1 Protein Homology CDS 993 2408 . + 0 ID=cds-WP_025160302.1;Parent=gene-IY40_RS13705;Dbxref=GenBank:WP_025160302.1;Name=WP_025160302.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=mdtD;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815059.1;locus_tag=IY40_RS13705;product=multidrug transporter subunit MdtD;protein_id=WP_025160302.1;transl_table=11 NZ_JPQY01000022.1 RefSeq gene 2405 3406 . - . ID=gene-IY40_RS13710;Name=rbsR;gbkey=Gene;gene=rbsR;gene_biotype=protein_coding;locus_tag=IY40_RS13710;old_locus_tag=IY40_13950 NZ_JPQY01000022.1 Protein Homology CDS 2405 3406 . - 0 ID=cds-WP_043140692.1;Parent=gene-IY40_RS13710;Dbxref=GenBank:WP_043140692.1;Name=WP_043140692.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=rbsR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004950431.1;locus_tag=IY40_RS13710;product=ribose operon transcriptional repressor RbsR;protein_id=WP_043140692.1;transl_table=11 NZ_JPQY01000022.1 RefSeq gene 3411 4337 . - . ID=gene-IY40_RS13715;Name=rbsK;gbkey=Gene;gene=rbsK;gene_biotype=protein_coding;locus_tag=IY40_RS13715;old_locus_tag=IY40_13955 NZ_JPQY01000022.1 Protein Homology CDS 3411 4337 . - 0 ID=cds-WP_025304728.1;Parent=gene-IY40_RS13715;Dbxref=GenBank:WP_025304728.1;Name=WP_025304728.1;Ontology_term=GO:0006014,GO:0004747;gbkey=CDS;gene=rbsK;go_function=ribokinase activity|0004747||IEA;go_process=D-ribose metabolic process|0006014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004956852.1;locus_tag=IY40_RS13715;product=ribokinase;protein_id=WP_025304728.1;transl_table=11 NZ_JPQY01000022.1 RefSeq gene 4399 5286 . - . ID=gene-IY40_RS13720;Name=rbsB;gbkey=Gene;gene=rbsB;gene_biotype=protein_coding;locus_tag=IY40_RS13720;old_locus_tag=IY40_13960 NZ_JPQY01000022.1 Protein Homology CDS 4399 5286 . - 0 ID=cds-WP_025304729.1;Parent=gene-IY40_RS13720;Dbxref=GenBank:WP_025304729.1;Name=WP_025304729.1;gbkey=CDS;gene=rbsB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017375080.1;locus_tag=IY40_RS13720;product=ribose ABC transporter substrate-binding protein RbsB;protein_id=WP_025304729.1;transl_table=11 NZ_JPQY01000022.1 RefSeq gene 5311 6279 . - . ID=gene-IY40_RS13725;Name=rbsC;gbkey=Gene;gene=rbsC;gene_biotype=protein_coding;locus_tag=IY40_RS13725;old_locus_tag=IY40_13965 NZ_JPQY01000022.1 Protein Homology CDS 5311 6279 . - 0 ID=cds-WP_025304730.1;Parent=gene-IY40_RS13725;Dbxref=GenBank:WP_025304730.1;Name=WP_025304730.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=rbsC;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005976511.1;locus_tag=IY40_RS13725;product=ribose ABC transporter permease;protein_id=WP_025304730.1;transl_table=11 NZ_JPQY01000022.1 RefSeq gene 6286 7791 . - . ID=gene-IY40_RS13730;Name=rbsA;gbkey=Gene;gene=rbsA;gene_biotype=protein_coding;locus_tag=IY40_RS13730;old_locus_tag=IY40_13970 NZ_JPQY01000022.1 Protein Homology CDS 6286 7791 . - 0 ID=cds-WP_043140703.1;Parent=gene-IY40_RS13730;Dbxref=GenBank:WP_043140703.1;Name=WP_043140703.1;Ontology_term=GO:0005524;gbkey=CDS;gene=rbsA;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009115037.1;locus_tag=IY40_RS13730;product=ribose ABC transporter ATP-binding protein RbsA;protein_id=WP_043140703.1;transl_table=11 NZ_JPQY01000022.1 RefSeq gene 7799 8218 . - . ID=gene-IY40_RS13735;Name=rbsD;gbkey=Gene;gene=rbsD;gene_biotype=protein_coding;locus_tag=IY40_RS13735;old_locus_tag=IY40_13975 NZ_JPQY01000022.1 Protein Homology CDS 7799 8218 . - 0 ID=cds-WP_033645162.1;Parent=gene-IY40_RS13735;Dbxref=GenBank:WP_033645162.1;Name=WP_033645162.1;Ontology_term=GO:0016872;gbkey=CDS;gene=rbsD;go_function=intramolecular lyase activity|0016872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004393068.1;locus_tag=IY40_RS13735;product=D-ribose pyranase;protein_id=WP_033645162.1;transl_table=11 NZ_JPQY01000022.1 RefSeq gene 8389 10257 . - . ID=gene-IY40_RS13740;Name=kup;gbkey=Gene;gene=kup;gene_biotype=protein_coding;locus_tag=IY40_RS13740;old_locus_tag=IY40_13980 NZ_JPQY01000022.1 Protein Homology CDS 8389 10257 . - 0 ID=cds-WP_015379467.1;Parent=gene-IY40_RS13740;Dbxref=GenBank:WP_015379467.1;Name=WP_015379467.1;Ontology_term=GO:0015079,GO:0016020;gbkey=CDS;gene=kup;go_component=membrane|0016020||IEA;go_function=potassium ion transmembrane transporter activity|0015079||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462779.1;locus_tag=IY40_RS13740;product=low affinity potassium transporter Kup;protein_id=WP_015379467.1;transl_table=11 NZ_JPQY01000022.1 RefSeq gene 10541 12049 . + . ID=gene-IY40_RS13745;Name=ravA;gbkey=Gene;gene=ravA;gene_biotype=protein_coding;locus_tag=IY40_RS13745;old_locus_tag=IY40_13985 NZ_JPQY01000022.1 Protein Homology CDS 10541 12049 . + 0 ID=cds-WP_025304733.1;Parent=gene-IY40_RS13745;Dbxref=GenBank:WP_025304733.1;Name=WP_025304733.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;gene=ravA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004933778.1;locus_tag=IY40_RS13745;product=ATPase RavA;protein_id=WP_025304733.1;transl_table=11 NZ_JPQY01000022.1 RefSeq gene 12052 13515 . + . ID=gene-IY40_RS13750;Name=viaA;gbkey=Gene;gene=viaA;gene_biotype=protein_coding;locus_tag=IY40_RS13750;old_locus_tag=IY40_13990 NZ_JPQY01000022.1 Protein Homology CDS 12052 13515 . + 0 ID=cds-WP_004933781.1;Parent=gene-IY40_RS13750;Dbxref=GenBank:WP_004933781.1;Name=WP_004933781.1;gbkey=CDS;gene=viaA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004875728.1;locus_tag=IY40_RS13750;product=ATPase RavA stimulator ViaA;protein_id=WP_004933781.1;transl_table=11 NZ_JPQY01000022.1 RefSeq gene 13520 14512 . - . ID=gene-IY40_RS13755;Name=asnA;gbkey=Gene;gene=asnA;gene_biotype=protein_coding;locus_tag=IY40_RS13755;old_locus_tag=IY40_13995 NZ_JPQY01000022.1 Protein Homology CDS 13520 14512 . - 0 ID=cds-WP_043140710.1;Parent=gene-IY40_RS13755;Dbxref=GenBank:WP_043140710.1;Name=WP_043140710.1;Ontology_term=GO:0070981,GO:0004071,GO:0005737;gbkey=CDS;gene=asnA;go_component=cytoplasm|0005737||IEA;go_function=aspartate-ammonia ligase activity|0004071||IEA;go_process=L-asparagine biosynthetic process|0070981||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004703868.1;locus_tag=IY40_RS13755;product=aspartate--ammonia ligase;protein_id=WP_043140710.1;transl_table=11 NZ_JPQY01000022.1 RefSeq gene 14668 15129 . + . ID=gene-IY40_RS13760;Name=asnC;gbkey=Gene;gene=asnC;gene_biotype=protein_coding;locus_tag=IY40_RS13760;old_locus_tag=IY40_14000 NZ_JPQY01000022.1 Protein Homology CDS 14668 15129 . + 0 ID=cds-WP_004933786.1;Parent=gene-IY40_RS13760;Dbxref=GenBank:WP_004933786.1;Name=WP_004933786.1;Ontology_term=GO:0043565;gbkey=CDS;gene=asnC;go_function=sequence-specific DNA binding|0043565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002220765.1;locus_tag=IY40_RS13760;product=transcriptional regulator AsnC;protein_id=WP_004933786.1;transl_table=11 NZ_JPQY01000022.1 RefSeq gene 15230 15670 . + . ID=gene-IY40_RS13765;Name=mioC;gbkey=Gene;gene=mioC;gene_biotype=protein_coding;locus_tag=IY40_RS13765;old_locus_tag=IY40_14005 NZ_JPQY01000022.1 Protein Homology CDS 15230 15670 . + 0 ID=cds-WP_025304736.1;Parent=gene-IY40_RS13765;Dbxref=GenBank:WP_025304736.1;Name=WP_025304736.1;Ontology_term=GO:0010181;gbkey=CDS;gene=mioC;go_function=FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005271485.1;locus_tag=IY40_RS13765;product=FMN-binding protein MioC;protein_id=WP_025304736.1;transl_table=11 NZ_JPQY01000022.1 RefSeq gene 16051 17940 . + . ID=gene-IY40_RS13770;Name=mnmG;gbkey=Gene;gene=mnmG;gene_biotype=protein_coding;locus_tag=IY40_RS13770;old_locus_tag=IY40_14010 NZ_JPQY01000022.1 Protein Homology CDS 16051 17940 . + 0 ID=cds-WP_043140713.1;Parent=gene-IY40_RS13770;Dbxref=GenBank:WP_043140713.1;Name=WP_043140713.1;Ontology_term=GO:0002098,GO:0008033;gbkey=CDS;gene=mnmG;go_process=tRNA wobble uridine modification|0002098||IEA,tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000499793.1;locus_tag=IY40_RS13770;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG;protein_id=WP_043140713.1;transl_table=11 NZ_JPQY01000022.1 RefSeq gene 18079 18699 . + . ID=gene-IY40_RS13775;Name=rsmG;gbkey=Gene;gene=rsmG;gene_biotype=protein_coding;locus_tag=IY40_RS13775;old_locus_tag=IY40_14015 NZ_JPQY01000022.1 Protein Homology CDS 18079 18699 . + 0 ID=cds-WP_025304738.1;Parent=gene-IY40_RS13775;Dbxref=GenBank:WP_025304738.1;Name=WP_025304738.1;Ontology_term=GO:0031167,GO:0046118,GO:0008168;gbkey=CDS;gene=rsmG;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA methylation|0031167||IEA,7-methylguanosine biosynthetic process|0046118||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004393048.1;locus_tag=IY40_RS13775;product=16S rRNA (guanine(527)-N(7))-methyltransferase RsmG;protein_id=WP_025304738.1;transl_table=11 NZ_JPQY01000022.1 RefSeq gene 19339 19722 . + . ID=gene-IY40_RS13780;Name=atpI;gbkey=Gene;gene=atpI;gene_biotype=protein_coding;locus_tag=IY40_RS13780;old_locus_tag=IY40_14020 NZ_JPQY01000022.1 Protein Homology CDS 19339 19722 . + 0 ID=cds-WP_025304739.1;Parent=gene-IY40_RS13780;Dbxref=GenBank:WP_025304739.1;Name=WP_025304739.1;gbkey=CDS;gene=atpI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004956904.1;locus_tag=IY40_RS13780;product=F0F1 ATP synthase subunit I;protein_id=WP_025304739.1;transl_table=11 NZ_JPQY01000022.1 RefSeq gene 19745 20521 . + . ID=gene-IY40_RS13785;Name=atpB;gbkey=Gene;gene=atpB;gene_biotype=protein_coding;locus_tag=IY40_RS13785;old_locus_tag=IY40_14025 NZ_JPQY01000022.1 Protein Homology CDS 19745 20521 . + 0 ID=cds-WP_025304740.1;Parent=gene-IY40_RS13785;Dbxref=GenBank:WP_025304740.1;Name=WP_025304740.1;Ontology_term=GO:0015986,GO:0015078,GO:0045259;gbkey=CDS;gene=atpB;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004956906.1;locus_tag=IY40_RS13785;product=F0F1 ATP synthase subunit A;protein_id=WP_025304740.1;transl_table=11 NZ_JPQY01000022.1 RefSeq gene 20571 20810 . + . ID=gene-IY40_RS13790;Name=atpE;gbkey=Gene;gene=atpE;gene_biotype=protein_coding;locus_tag=IY40_RS13790;old_locus_tag=IY40_14030 NZ_JPQY01000022.1 Protein Homology CDS 20571 20810 . + 0 ID=cds-WP_004093904.1;Parent=gene-IY40_RS13790;Dbxref=GenBank:WP_004093904.1;Name=WP_004093904.1;Ontology_term=GO:0015986,GO:0015078;gbkey=CDS;gene=atpE;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246596.1;locus_tag=IY40_RS13790;product=F0F1 ATP synthase subunit C;protein_id=WP_004093904.1;transl_table=11 NZ_JPQY01000022.1 RefSeq gene 20868 21338 . + . ID=gene-IY40_RS13795;Name=atpF;gbkey=Gene;gene=atpF;gene_biotype=protein_coding;locus_tag=IY40_RS13795;old_locus_tag=IY40_14035 NZ_JPQY01000022.1 Protein Homology CDS 20868 21338 . + 0 ID=cds-WP_004933804.1;Parent=gene-IY40_RS13795;Dbxref=GenBank:WP_004933804.1;Name=WP_004933804.1;Ontology_term=GO:0015986,GO:0015078;gbkey=CDS;gene=atpF;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001052215.1;locus_tag=IY40_RS13795;product=F0F1 ATP synthase subunit B;protein_id=WP_004933804.1;transl_table=11 NZ_JPQY01000022.1 RefSeq gene 21353 21886 . + . ID=gene-IY40_RS13800;Name=atpH;gbkey=Gene;gene=atpH;gene_biotype=protein_coding;locus_tag=IY40_RS13800;old_locus_tag=IY40_14040 NZ_JPQY01000022.1 Protein Homology CDS 21353 21886 . + 0 ID=cds-WP_025304741.1;Parent=gene-IY40_RS13800;Dbxref=GenBank:WP_025304741.1;Name=WP_025304741.1;Ontology_term=GO:0015986,GO:0046933,GO:0016020;gbkey=CDS;gene=atpH;go_component=membrane|0016020||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015966593.1;locus_tag=IY40_RS13800;product=F0F1 ATP synthase subunit delta;protein_id=WP_025304741.1;transl_table=11 NZ_JPQY01000022.1 RefSeq gene 21899 23440 . + . ID=gene-IY40_RS13805;Name=atpA;gbkey=Gene;gene=atpA;gene_biotype=protein_coding;locus_tag=IY40_RS13805;old_locus_tag=IY40_14045 NZ_JPQY01000022.1 Protein Homology CDS 21899 23440 . + 0 ID=cds-WP_025304742.1;Parent=gene-IY40_RS13805;Dbxref=GenBank:WP_025304742.1;Name=WP_025304742.1;Ontology_term=GO:0015986,GO:0046933,GO:0045259;gbkey=CDS;gene=atpA;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001176751.1;locus_tag=IY40_RS13805;product=F0F1 ATP synthase subunit alpha;protein_id=WP_025304742.1;transl_table=11 NZ_JPQY01000022.1 RefSeq gene 23500 24363 . + . ID=gene-IY40_RS13810;Name=atpG;gbkey=Gene;gene=atpG;gene_biotype=protein_coding;locus_tag=IY40_RS13810;old_locus_tag=IY40_14050 NZ_JPQY01000022.1 Protein Homology CDS 23500 24363 . + 0 ID=cds-WP_004933811.1;Parent=gene-IY40_RS13810;Dbxref=GenBank:WP_004933811.1;Name=WP_004933811.1;Ontology_term=GO:0015986,GO:0046933,GO:0045259;gbkey=CDS;gene=atpG;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020882764.1;locus_tag=IY40_RS13810;product=F0F1 ATP synthase subunit gamma;protein_id=WP_004933811.1;transl_table=11 NZ_JPQY01000022.1 RefSeq gene 24396 25778 . + . ID=gene-IY40_RS13815;Name=atpD;gbkey=Gene;gene=atpD;gene_biotype=protein_coding;locus_tag=IY40_RS13815;old_locus_tag=IY40_14055 NZ_JPQY01000022.1 Protein Homology CDS 24396 25778 . + 0 ID=cds-WP_004933813.1;Parent=gene-IY40_RS13815;Dbxref=GenBank:WP_004933813.1;Name=WP_004933813.1;Ontology_term=GO:0015986,GO:0046933,GO:0045259;gbkey=CDS;gene=atpD;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312701.1;locus_tag=IY40_RS13815;product=F0F1 ATP synthase subunit beta;protein_id=WP_004933813.1;transl_table=11 NZ_JPQY01000022.1 RefSeq gene 25799 26218 . + . ID=gene-IY40_RS13820;Name=IY40_RS13820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS13820;old_locus_tag=IY40_14060 NZ_JPQY01000022.1 Protein Homology CDS 25799 26218 . + 0 ID=cds-WP_004933814.1;Parent=gene-IY40_RS13820;Dbxref=GenBank:WP_004933814.1;Name=WP_004933814.1;Ontology_term=GO:0015986,GO:0046933;gbkey=CDS;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001251972.1;locus_tag=IY40_RS13820;product=F0F1 ATP synthase subunit epsilon;protein_id=WP_004933814.1;transl_table=11 NZ_JPQY01000022.1 RefSeq gene 26509 27882 . + . ID=gene-IY40_RS13825;Name=glmU;gbkey=Gene;gene=glmU;gene_biotype=protein_coding;locus_tag=IY40_RS13825;old_locus_tag=IY40_14065 NZ_JPQY01000022.1 Protein Homology CDS 26509 27882 . + 0 ID=cds-WP_043140716.1;Parent=gene-IY40_RS13825;Dbxref=GenBank:WP_043140716.1;Name=WP_043140716.1;Ontology_term=GO:0000902,GO:0006048,GO:0009252,GO:0000287,GO:0003977,GO:0019134;gbkey=CDS;gene=glmU;go_function=magnesium ion binding|0000287||IEA,UDP-N-acetylglucosamine diphosphorylase activity|0003977||IEA,glucosamine-1-phosphate N-acetyltransferase activity|0019134||IEA;go_process=cell morphogenesis|0000902||IEA,UDP-N-acetylglucosamine biosynthetic process|0006048||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004933815.1;locus_tag=IY40_RS13825;product=bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU;protein_id=WP_043140716.1;transl_table=11 NZ_JPQY01000022.1 RefSeq gene 28035 29864 . + . ID=gene-IY40_RS13830;Name=glmS;gbkey=Gene;gene=glmS;gene_biotype=protein_coding;locus_tag=IY40_RS13830;old_locus_tag=IY40_14070 NZ_JPQY01000022.1 Protein Homology CDS 28035 29864 . + 0 ID=cds-WP_043140722.1;Parent=gene-IY40_RS13830;Dbxref=GenBank:WP_043140722.1;Name=WP_043140722.1;Ontology_term=GO:1901137,GO:0004360;gbkey=CDS;gene=glmS;go_function=glutamine-fructose-6-phosphate transaminase (isomerizing) activity|0004360||IEA;go_process=carbohydrate derivative biosynthetic process|1901137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709542.1;locus_tag=IY40_RS13830;product=glutamine--fructose-6-phosphate transaminase (isomerizing);protein_id=WP_043140722.1;transl_table=11 NZ_JPQY01000022.1 RefSeq gene 30201 31241 . + . ID=gene-IY40_RS13835;Name=pstS;gbkey=Gene;gene=pstS;gene_biotype=protein_coding;locus_tag=IY40_RS13835;old_locus_tag=IY40_14075 NZ_JPQY01000022.1 Protein Homology CDS 30201 31241 . + 0 ID=cds-WP_043140725.1;Parent=gene-IY40_RS13835;Dbxref=GenBank:WP_043140725.1;Name=WP_043140725.1;Ontology_term=GO:0035435,GO:0042301,GO:0043190;gbkey=CDS;gene=pstS;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=phosphate ion binding|0042301||IEA;go_process=phosphate ion transmembrane transport|0035435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462756.1;locus_tag=IY40_RS13835;product=phosphate ABC transporter substrate-binding protein PstS;protein_id=WP_043140725.1;transl_table=11 NZ_JPQY01000022.1 RefSeq gene 31333 32289 . + . ID=gene-IY40_RS13840;Name=pstC;gbkey=Gene;gene=pstC;gene_biotype=protein_coding;locus_tag=IY40_RS13840;old_locus_tag=IY40_14080 NZ_JPQY01000022.1 Protein Homology CDS 31333 32289 . + 0 ID=cds-WP_016929615.1;Parent=gene-IY40_RS13840;Dbxref=GenBank:WP_016929615.1;Name=WP_016929615.1;Ontology_term=GO:0006817,GO:0055085,GO:0016020;gbkey=CDS;gene=pstC;go_component=membrane|0016020||IEA;go_process=phosphate ion transport|0006817||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002215558.1;locus_tag=IY40_RS13840;product=phosphate ABC transporter permease PstC;protein_id=WP_016929615.1;transl_table=11 NZ_JPQY01000022.1 RefSeq gene 32291 33181 . + . ID=gene-IY40_RS13845;Name=pstA;gbkey=Gene;gene=pstA;gene_biotype=protein_coding;locus_tag=IY40_RS13845;old_locus_tag=IY40_14085 NZ_JPQY01000022.1 Protein Homology CDS 32291 33181 . + 0 ID=cds-WP_025304746.1;Parent=gene-IY40_RS13845;Dbxref=GenBank:WP_025304746.1;Name=WP_025304746.1;Ontology_term=GO:0035435,GO:0005886;gbkey=CDS;gene=pstA;go_component=plasma membrane|0005886||IEA;go_process=phosphate ion transmembrane transport|0035435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004933824.1;locus_tag=IY40_RS13845;product=phosphate ABC transporter permease PstA;protein_id=WP_025304746.1;transl_table=11 NZ_JPQY01000022.1 RefSeq gene 33236 34006 . + . ID=gene-IY40_RS13850;Name=pstB;gbkey=Gene;gene=pstB;gene_biotype=protein_coding;locus_tag=IY40_RS13850;old_locus_tag=IY40_14090 NZ_JPQY01000022.1 Protein Homology CDS 33236 34006 . + 0 ID=cds-WP_016929614.1;Parent=gene-IY40_RS13850;Dbxref=GenBank:WP_016929614.1;Name=WP_016929614.1;Ontology_term=GO:0006817,GO:0005524,GO:0015415,GO:0009898,GO:0055052;gbkey=CDS;gene=pstB;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled phosphate ion transmembrane transporter activity|0015415||IEA;go_process=phosphate ion transport|0006817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002361439.1;locus_tag=IY40_RS13850;product=phosphate ABC transporter ATP-binding protein PstB;protein_id=WP_016929614.1;transl_table=11 NZ_JPQY01000022.1 RefSeq gene 34018 34752 . + . ID=gene-IY40_RS13855;Name=phoU;gbkey=Gene;gene=phoU;gene_biotype=protein_coding;locus_tag=IY40_RS13855;old_locus_tag=IY40_14095 NZ_JPQY01000022.1 Protein Homology CDS 34018 34752 . + 0 ID=cds-WP_033636521.1;Parent=gene-IY40_RS13855;Dbxref=GenBank:WP_033636521.1;Name=WP_033636521.1;Ontology_term=GO:0030643;gbkey=CDS;gene=phoU;go_process=intracellular phosphate ion homeostasis|0030643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004933833.1;locus_tag=IY40_RS13855;product=phosphate signaling complex protein PhoU;protein_id=WP_033636521.1;transl_table=11 NZ_JPQY01000022.1 RefSeq gene 34921 35760 . + . ID=gene-IY40_RS13860;Name=IY40_RS13860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS13860;old_locus_tag=IY40_14100 NZ_JPQY01000022.1 Protein Homology CDS 34921 35760 . + 0 ID=cds-WP_019455482.1;Parent=gene-IY40_RS13860;Dbxref=GenBank:WP_019455482.1;Name=WP_019455482.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012004493.1;locus_tag=IY40_RS13860;product=ABC transporter substrate-binding protein;protein_id=WP_019455482.1;transl_table=11 NZ_JPQY01000022.1 RefSeq gene 35842 36555 . + . ID=gene-IY40_RS13865;Name=IY40_RS13865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS13865;old_locus_tag=IY40_14105 NZ_JPQY01000022.1 Protein Homology CDS 35842 36555 . + 0 ID=cds-WP_025304748.1;Parent=gene-IY40_RS13865;Dbxref=GenBank:WP_025304748.1;Name=WP_025304748.1;Ontology_term=GO:0006865,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016929611.1;locus_tag=IY40_RS13865;product=amino acid ABC transporter permease;protein_id=WP_025304748.1;transl_table=11 NZ_JPQY01000022.1 RefSeq gene 36557 37297 . + . ID=gene-IY40_RS13870;Name=IY40_RS13870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS13870;old_locus_tag=IY40_14110 NZ_JPQY01000022.1 Protein Homology CDS 36557 37297 . + 0 ID=cds-WP_004933841.1;Parent=gene-IY40_RS13870;Dbxref=GenBank:WP_004933841.1;Name=WP_004933841.1;Ontology_term=GO:0006865,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011193355.1;locus_tag=IY40_RS13870;product=amino acid ABC transporter permease;protein_id=WP_004933841.1;transl_table=11 NZ_JPQY01000022.1 RefSeq gene 37294 37962 . - . ID=gene-IY40_RS13875;Name=yieH;gbkey=Gene;gene=yieH;gene_biotype=protein_coding;locus_tag=IY40_RS13875;old_locus_tag=IY40_14115 NZ_JPQY01000022.1 Protein Homology CDS 37294 37962 . - 0 ID=cds-WP_043140727.1;Parent=gene-IY40_RS13875;Dbxref=GenBank:WP_043140727.1;Name=WP_043140727.1;gbkey=CDS;gene=yieH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002215575.1;locus_tag=IY40_RS13875;product=6-phosphogluconate phosphatase;protein_id=WP_043140727.1;transl_table=11 NZ_JPQY01000022.1 RefSeq gene 38009 38413 . - . ID=gene-IY40_RS13880;Name=IY40_RS13880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS13880;old_locus_tag=IY40_14120 NZ_JPQY01000022.1 Protein Homology CDS 38009 38413 . - 0 ID=cds-WP_016929609.1;Parent=gene-IY40_RS13880;Dbxref=GenBank:WP_016929609.1;Name=WP_016929609.1;Ontology_term=GO:0009132,GO:0016817,GO:0046872;gbkey=CDS;go_function=hydrolase activity%2C acting on acid anhydrides|0016817||IEA,metal ion binding|0046872||IEA;go_process=nucleoside diphosphate metabolic process|0009132||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004933848.1;locus_tag=IY40_RS13880;product=NUDIX hydrolase;protein_id=WP_016929609.1;transl_table=11 NZ_JPQY01000022.1 RefSeq gene 38646 39983 . + . ID=gene-IY40_RS13885;Name=IY40_RS13885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS13885;old_locus_tag=IY40_14125 NZ_JPQY01000022.1 Protein Homology CDS 38646 39983 . + 0 ID=cds-WP_004933851.1;Parent=gene-IY40_RS13885;Dbxref=GenBank:WP_004933851.1;Name=WP_004933851.1;Ontology_term=GO:0015851,GO:0015205,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=nucleobase transmembrane transporter activity|0015205||IEA;go_process=nucleobase transport|0015851||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815077.1;locus_tag=IY40_RS13885;product=NCS2 family permease;protein_id=WP_004933851.1;transl_table=11 NZ_JPQY01000022.1 RefSeq gene 40018 41070 . - . ID=gene-IY40_RS13890;Name=IY40_RS13890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS13890;old_locus_tag=IY40_14130 NZ_JPQY01000022.1 Protein Homology CDS 40018 41070 . - 0 ID=cds-WP_025304751.1;Parent=gene-IY40_RS13890;Dbxref=GenBank:WP_025304751.1;Name=WP_025304751.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004933854.1;locus_tag=IY40_RS13890;product=alpha/beta hydrolase;protein_id=WP_025304751.1;transl_table=11 NZ_JPQY01000022.1 RefSeq gene 41148 41714 . - . ID=gene-IY40_RS13895;Name=IY40_RS13895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS13895;old_locus_tag=IY40_14135 NZ_JPQY01000022.1 Protein Homology CDS 41148 41714 . - 0 ID=cds-WP_025304752.1;Parent=gene-IY40_RS13895;Dbxref=GenBank:WP_025304752.1;Name=WP_025304752.1;Ontology_term=GO:0008752,GO:0008753,GO:0010181,GO:0016491,GO:0050136,GO:0052873;gbkey=CDS;go_function=FMN reductase [NAD(P)H] activity|0008752||IEA,NADPH dehydrogenase (quinone) activity|0008753||IEA,FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA,NADH dehydrogenase (quinone) (non-electrogenic) activity|0050136||IEA,FMN reductase (NADPH) activity|0052873||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006321778.1;locus_tag=IY40_RS13895;product=NADPH-dependent FMN reductase;protein_id=WP_025304752.1;transl_table=11 NZ_JPQY01000022.1 RefSeq gene 41876 42601 . - . ID=gene-IY40_RS13900;Name=IY40_RS13900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS13900;old_locus_tag=IY40_14140 NZ_JPQY01000022.1 Protein Homology CDS 41876 42601 . - 0 ID=cds-WP_025304753.1;Parent=gene-IY40_RS13900;Dbxref=GenBank:WP_025304753.1;Name=WP_025304753.1;Ontology_term=GO:0008897;gbkey=CDS;go_function=holo-[acyl-carrier-protein] synthase activity|0008897||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004933861.1;locus_tag=IY40_RS13900;product=4'-phosphopantetheinyl transferase family protein;protein_id=WP_025304753.1;transl_table=11 NZ_JPQY01000022.1 RefSeq gene 42697 44010 . - . ID=gene-IY40_RS13905;Name=IY40_RS13905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS13905;old_locus_tag=IY40_14145 NZ_JPQY01000022.1 Protein Homology CDS 42697 44010 . - 0 ID=cds-WP_043140728.1;Parent=gene-IY40_RS13905;Dbxref=GenBank:WP_043140728.1;Name=WP_043140728.1;Ontology_term=GO:0004497;gbkey=CDS;go_function=monooxygenase activity|0004497||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012004501.1;locus_tag=IY40_RS13905;product=lysine N(6)-hydroxylase/L-ornithine N(5)-oxygenase family protein;protein_id=WP_043140728.1;transl_table=11 NZ_JPQY01000022.1 RefSeq gene 44122 45486 . - . ID=gene-IY40_RS13910;Name=mnmE;gbkey=Gene;gene=mnmE;gene_biotype=protein_coding;locus_tag=IY40_RS13910;old_locus_tag=IY40_14150 NZ_JPQY01000022.1 Protein Homology CDS 44122 45486 . - 0 ID=cds-WP_025304755.1;Parent=gene-IY40_RS13910;Dbxref=GenBank:WP_025304755.1;Name=WP_025304755.1;Ontology_term=GO:0006400,GO:0003924,GO:0005515,GO:0005525;gbkey=CDS;gene=mnmE;go_function=GTPase activity|0003924||IEA,protein binding|0005515||IEA,GTP binding|0005525||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015848543.1;locus_tag=IY40_RS13910;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE;protein_id=WP_025304755.1;transl_table=11 NZ_JPQY01000022.1 RefSeq gene 45583 47220 . - . ID=gene-IY40_RS13915;Name=yidC;gbkey=Gene;gene=yidC;gene_biotype=protein_coding;locus_tag=IY40_RS13915;old_locus_tag=IY40_14155 NZ_JPQY01000022.1 Protein Homology CDS 45583 47220 . - 0 ID=cds-WP_025304756.1;Parent=gene-IY40_RS13915;Dbxref=GenBank:WP_025304756.1;Name=WP_025304756.1;Ontology_term=GO:0032977,GO:0016020;gbkey=CDS;gene=yidC;go_component=membrane|0016020||IEA;go_function=membrane insertase activity|0032977||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015962454.1;locus_tag=IY40_RS13915;product=membrane protein insertase YidC;protein_id=WP_025304756.1;transl_table=11 NZ_JPQY01000022.1 RefSeq gene 47223 47480 . - . ID=gene-IY40_RS25315;Name=yidD;gbkey=Gene;gene=yidD;gene_biotype=protein_coding;locus_tag=IY40_RS25315 NZ_JPQY01000022.1 Protein Homology CDS 47223 47480 . - 0 ID=cds-WP_004933881.1;Parent=gene-IY40_RS25315;Dbxref=GenBank:WP_004933881.1;Name=WP_004933881.1;gbkey=CDS;gene=yidD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020324524.1;locus_tag=IY40_RS25315;product=membrane protein insertion efficiency factor YidD;protein_id=WP_004933881.1;transl_table=11 NZ_JPQY01000022.1 RefSeq gene 47444 47803 . - . ID=gene-IY40_RS13920;Name=rnpA;gbkey=Gene;gene=rnpA;gene_biotype=protein_coding;locus_tag=IY40_RS13920;old_locus_tag=IY40_14160 NZ_JPQY01000022.1 Protein Homology CDS 47444 47803 . - 0 ID=cds-WP_004933883.1;Parent=gene-IY40_RS13920;Dbxref=GenBank:WP_004933883.1;Name=WP_004933883.1;Ontology_term=GO:0008033,GO:0000049,GO:0004526;gbkey=CDS;gene=rnpA;go_function=tRNA binding|0000049||IEA,ribonuclease P activity|0004526||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014172301.1;locus_tag=IY40_RS13920;product=ribonuclease P protein component;protein_id=WP_004933883.1;transl_table=11 NZ_JPQY01000022.1 RefSeq gene 47821 47961 . - . ID=gene-IY40_RS25320;Name=rpmH;gbkey=Gene;gene=rpmH;gene_biotype=protein_coding;locus_tag=IY40_RS25320 NZ_JPQY01000022.1 Protein Homology CDS 47821 47961 . - 0 ID=cds-WP_000831330.1;Parent=gene-IY40_RS25320;Dbxref=GenBank:WP_000831330.1;Name=WP_000831330.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmH;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001686914.1;locus_tag=IY40_RS25320;product=50S ribosomal protein L34;protein_id=WP_000831330.1;transl_table=11 NZ_JPQY01000022.1 RefSeq gene 48644 50038 . + . ID=gene-IY40_RS13925;Name=dnaA;gbkey=Gene;gene=dnaA;gene_biotype=protein_coding;locus_tag=IY40_RS13925;old_locus_tag=IY40_14165 NZ_JPQY01000022.1 Protein Homology CDS 48644 50038 . + 0 ID=cds-WP_071826153.1;Parent=gene-IY40_RS13925;Dbxref=GenBank:WP_071826153.1;Name=WP_071826153.1;Ontology_term=GO:0006270,GO:0006275,GO:0003677,GO:0003688,GO:0005524;gbkey=CDS;gene=dnaA;go_function=DNA binding|0003677||IEA,DNA replication origin binding|0003688||IEA,ATP binding|0005524||IEA;go_process=DNA replication initiation|0006270||IEA,regulation of DNA replication|0006275||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003861124.1;locus_tag=IY40_RS13925;product=chromosomal replication initiator protein DnaA;protein_id=WP_071826153.1;transl_table=11 NZ_JPQY01000022.1 RefSeq gene 50043 51143 . + . ID=gene-IY40_RS13930;Name=dnaN;gbkey=Gene;gene=dnaN;gene_biotype=protein_coding;locus_tag=IY40_RS13930;old_locus_tag=IY40_14170 NZ_JPQY01000022.1 Protein Homology CDS 50043 51143 . + 0 ID=cds-WP_004933892.1;Parent=gene-IY40_RS13930;Dbxref=GenBank:WP_004933892.1;Name=WP_004933892.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887,GO:0009360;gbkey=CDS;gene=dnaN;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006177590.1;locus_tag=IY40_RS13930;product=DNA polymerase III subunit beta;protein_id=WP_004933892.1;transl_table=11 NZ_JPQY01000022.1 RefSeq gene 51189 52274 . + . ID=gene-IY40_RS13935;Name=recF;gbkey=Gene;gene=recF;gene_biotype=protein_coding;locus_tag=IY40_RS13935;old_locus_tag=IY40_14175 NZ_JPQY01000022.1 Protein Homology CDS 51189 52274 . + 0 ID=cds-WP_025304758.1;Parent=gene-IY40_RS13935;Dbxref=GenBank:WP_025304758.1;Name=WP_025304758.1;Note=All proteins in this family for which functions are known are DNA-binding proteins that assist the filamentation of RecA onto DNA for the initiation of recombination or recombinational repair.;Ontology_term=GO:0006260,GO:0006281,GO:0006310,GO:0009432,GO:0003697,GO:0005524;gbkey=CDS;gene=recF;go_function=single-stranded DNA binding|0003697||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA,DNA recombination|0006310||IEA,SOS response|0009432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004875688.1;locus_tag=IY40_RS13935;product=DNA replication/repair protein RecF;protein_id=WP_025304758.1;transl_table=11 NZ_JPQY01000022.1 RefSeq gene 52293 54707 . + . ID=gene-IY40_RS13940;Name=gyrB;gbkey=Gene;gene=gyrB;gene_biotype=protein_coding;locus_tag=IY40_RS13940;old_locus_tag=IY40_14180 NZ_JPQY01000022.1 Protein Homology CDS 52293 54707 . + 0 ID=cds-WP_025304759.1;Parent=gene-IY40_RS13940;Dbxref=GenBank:WP_025304759.1;Name=WP_025304759.1;Ontology_term=GO:0006265,GO:0003677,GO:0003918,GO:0005524,GO:0005694;gbkey=CDS;gene=gyrB;go_component=chromosome|0005694||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA,ATP binding|0005524||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121480.1;locus_tag=IY40_RS13940;product=DNA topoisomerase (ATP-hydrolyzing) subunit B;protein_id=WP_025304759.1;transl_table=11 NZ_JPQY01000022.1 RefSeq gene 54834 55649 . + . ID=gene-IY40_RS13945;Name=yidA;gbkey=Gene;gene=yidA;gene_biotype=protein_coding;locus_tag=IY40_RS13945;old_locus_tag=IY40_14185 NZ_JPQY01000022.1 Protein Homology CDS 54834 55649 . + 0 ID=cds-WP_025304760.1;Parent=gene-IY40_RS13945;Dbxref=GenBank:WP_025304760.1;Name=WP_025304760.1;Ontology_term=GO:0016787;gbkey=CDS;gene=yidA;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012004510.1;locus_tag=IY40_RS13945;product=sugar-phosphatase;protein_id=WP_025304760.1;transl_table=11 NZ_JPQY01000022.1 RefSeq gene 55676 56617 . - . ID=gene-IY40_RS13950;Name=IY40_RS13950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS13950;old_locus_tag=IY40_14190 NZ_JPQY01000022.1 Protein Homology CDS 55676 56617 . - 0 ID=cds-WP_043140730.1;Parent=gene-IY40_RS13950;Dbxref=GenBank:WP_043140730.1;Name=WP_043140730.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016929597.1;locus_tag=IY40_RS13950;product=ornithine cyclodeaminase family protein;protein_id=WP_043140730.1;transl_table=11 NZ_JPQY01000022.1 RefSeq gene 56604 57572 . - . ID=gene-IY40_RS13955;Name=IY40_RS13955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS13955;old_locus_tag=IY40_14195 NZ_JPQY01000022.1 Protein Homology CDS 56604 57572 . - 0 ID=cds-WP_043140733.1;Parent=gene-IY40_RS13955;Dbxref=GenBank:WP_043140733.1;Name=WP_043140733.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016929596.1;locus_tag=IY40_RS13955;product=threonine/serine dehydratase;protein_id=WP_043140733.1;transl_table=11 NZ_JPQY01000022.1 RefSeq gene 57590 58009 . + . ID=gene-IY40_RS13960;Name=IY40_RS13960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS13960;old_locus_tag=IY40_14200 NZ_JPQY01000022.1 GeneMarkS-2+ CDS 57590 58009 . + 0 ID=cds-WP_043140735.1;Parent=gene-IY40_RS13960;Dbxref=GenBank:WP_043140735.1;Name=WP_043140735.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IY40_RS13960;product=hypothetical protein;protein_id=WP_043140735.1;transl_table=11 NZ_JPQY01000022.1 RefSeq gene 58048 59328 . + . ID=gene-IY40_RS13965;Name=IY40_RS13965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS13965;old_locus_tag=IY40_14205 NZ_JPQY01000022.1 Protein Homology CDS 58048 59328 . + 0 ID=cds-WP_043140737.1;Parent=gene-IY40_RS13965;Dbxref=GenBank:WP_043140737.1;Name=WP_043140737.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004933910.1;locus_tag=IY40_RS13965;product=DUF3748 domain-containing protein;protein_id=WP_043140737.1;transl_table=11 NZ_JPQY01000022.1 RefSeq gene 59359 59706 . - . ID=gene-IY40_RS13970;Name=IY40_RS13970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS13970;old_locus_tag=IY40_14210 NZ_JPQY01000022.1 Protein Homology CDS 59359 59706 . - 0 ID=cds-WP_016929593.1;Parent=gene-IY40_RS13970;Dbxref=GenBank:WP_016929593.1;Name=WP_016929593.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013810932.1;locus_tag=IY40_RS13970;product=YceK/YidQ family lipoprotein;protein_id=WP_016929593.1;transl_table=11 NZ_JPQY01000022.1 RefSeq gene 60016 60429 . + . ID=gene-IY40_RS13975;Name=ibpA;gbkey=Gene;gene=ibpA;gene_biotype=protein_coding;locus_tag=IY40_RS13975;old_locus_tag=IY40_14215 NZ_JPQY01000022.1 Protein Homology CDS 60016 60429 . + 0 ID=cds-WP_004933919.1;Parent=gene-IY40_RS13975;Dbxref=GenBank:WP_004933919.1;Name=WP_004933919.1;Ontology_term=GO:0006950,GO:0051082;gbkey=CDS;gene=ibpA;go_function=unfolded protein binding|0051082||IEA;go_process=response to stress|0006950||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209636.1;locus_tag=IY40_RS13975;product=small heat shock chaperone IbpA;protein_id=WP_004933919.1;transl_table=11 NZ_JPQY01000022.1 RefSeq gene 60536 60964 . + . ID=gene-IY40_RS13980;Name=ibpB;gbkey=Gene;gene=ibpB;gene_biotype=protein_coding;locus_tag=IY40_RS13980;old_locus_tag=IY40_14220 NZ_JPQY01000022.1 Protein Homology CDS 60536 60964 . + 0 ID=cds-WP_004933922.1;Parent=gene-IY40_RS13980;Dbxref=GenBank:WP_004933922.1;Name=WP_004933922.1;Ontology_term=GO:0006950,GO:0051082;gbkey=CDS;gene=ibpB;go_function=unfolded protein binding|0051082||IEA;go_process=response to stress|0006950||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004933922.1;locus_tag=IY40_RS13980;product=small heat shock chaperone IbpB;protein_id=WP_004933922.1;transl_table=11 NZ_JPQY01000022.1 RefSeq gene 61132 62790 . + . ID=gene-IY40_RS13985;Name=IY40_RS13985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS13985;old_locus_tag=IY40_14225 NZ_JPQY01000022.1 Protein Homology CDS 61132 62790 . + 0 ID=cds-WP_025304765.1;Parent=gene-IY40_RS13985;Dbxref=GenBank:WP_025304765.1;Name=WP_025304765.1;Ontology_term=GO:0006813,GO:0008324;gbkey=CDS;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005186793.1;locus_tag=IY40_RS13985;product=putative transporter;protein_id=WP_025304765.1;transl_table=11 NZ_JPQY01000022.1 RefSeq gene 62801 63181 . - . ID=gene-IY40_RS13990;Name=IY40_RS13990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS13990;old_locus_tag=IY40_14230 NZ_JPQY01000022.1 Protein Homology CDS 62801 63181 . - 0 ID=cds-WP_025304766.1;Parent=gene-IY40_RS13990;Dbxref=GenBank:WP_025304766.1;Name=WP_025304766.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004933929.1;locus_tag=IY40_RS13990;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_025304766.1;transl_table=11 NZ_JPQY01000022.1 RefSeq gene 63181 63402 . - . ID=gene-IY40_RS13995;Name=IY40_RS13995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS13995;old_locus_tag=IY40_14235 NZ_JPQY01000022.1 Protein Homology CDS 63181 63402 . - 0 ID=cds-WP_025304767.1;Parent=gene-IY40_RS13995;Dbxref=GenBank:WP_025304767.1;Name=WP_025304767.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009114690.1;locus_tag=IY40_RS13995;product=ribbon-helix-helix domain-containing protein;protein_id=WP_025304767.1;transl_table=11 NZ_JPQY01000022.1 RefSeq gene 63478 64728 . - . ID=gene-IY40_RS14000;Name=IY40_RS14000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS14000;old_locus_tag=IY40_14240 NZ_JPQY01000022.1 Protein Homology CDS 63478 64728 . - 0 ID=cds-WP_025304768.1;Parent=gene-IY40_RS14000;Dbxref=GenBank:WP_025304768.1;Name=WP_025304768.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004933935.1;locus_tag=IY40_RS14000;product=valine--pyruvate transaminase;protein_id=WP_025304768.1;transl_table=11 NZ_JPQY01000022.1 RefSeq gene 64864 66927 . - . ID=gene-IY40_RS14005;Name=IY40_RS14005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS14005;old_locus_tag=IY40_14245 NZ_JPQY01000022.1 Protein Homology CDS 64864 66927 . - 0 ID=cds-WP_025304769.1;Parent=gene-IY40_RS14005;Dbxref=GenBank:WP_025304769.1;Name=WP_025304769.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019084181.1;locus_tag=IY40_RS14005;product=alpha-amylase;protein_id=WP_025304769.1;transl_table=11 NZ_JPQY01000022.1 RefSeq gene 67124 67276 . + . ID=gene-IY40_RS26390;Name=IY40_RS26390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS26390 NZ_JPQY01000022.1 Protein Homology CDS 67124 67276 . + 0 ID=cds-WP_162837931.1;Parent=gene-IY40_RS26390;Dbxref=GenBank:WP_162837931.1;Name=WP_162837931.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016929589.1;locus_tag=IY40_RS26390;product=hypothetical protein;protein_id=WP_162837931.1;transl_table=11 NZ_JPQY01000022.1 RefSeq gene 67278 68255 . - . ID=gene-IY40_RS14010;Name=ghrB;gbkey=Gene;gene=ghrB;gene_biotype=protein_coding;locus_tag=IY40_RS14010;old_locus_tag=IY40_14255 NZ_JPQY01000022.1 Protein Homology CDS 67278 68255 . - 0 ID=cds-WP_025304770.1;Parent=gene-IY40_RS14010;Dbxref=GenBank:WP_025304770.1;Name=WP_025304770.1;Ontology_term=GO:0016616,GO:0051287;gbkey=CDS;gene=ghrB;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012004530.1;locus_tag=IY40_RS14010;product=glyoxylate/hydroxypyruvate reductase GhrB;protein_id=WP_025304770.1;transl_table=11 NZ_JPQY01000022.1 RefSeq gene 68329 69597 . - . ID=gene-IY40_RS14015;Name=IY40_RS14015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS14015;old_locus_tag=IY40_14260 NZ_JPQY01000022.1 Protein Homology CDS 68329 69597 . - 0 ID=cds-WP_025304771.1;Parent=gene-IY40_RS14015;Dbxref=GenBank:WP_025304771.1;Name=WP_025304771.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019455510.1;locus_tag=IY40_RS14015;product=MFS transporter;protein_id=WP_025304771.1;transl_table=11 NZ_JPQY01000022.1 RefSeq gene 69738 70703 . - . ID=gene-IY40_RS14020;Name=IY40_RS14020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS14020;old_locus_tag=IY40_14265 NZ_JPQY01000022.1 Protein Homology CDS 69738 70703 . - 0 ID=cds-WP_043140921.1;Parent=gene-IY40_RS14020;Dbxref=GenBank:WP_043140921.1;Name=WP_043140921.1;Ontology_term=GO:0005975,GO:0019200,GO:0005829;gbkey=CDS;go_component=cytosol|0005829||IEA;go_function=carbohydrate kinase activity|0019200||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013810940.1;locus_tag=IY40_RS14020;product=sugar kinase;protein_id=WP_043140921.1;transl_table=11 NZ_JPQY01000022.1 RefSeq gene 70711 71463 . - . ID=gene-IY40_RS14025;Name=IY40_RS14025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS14025;old_locus_tag=IY40_14270 NZ_JPQY01000022.1 Protein Homology CDS 70711 71463 . - 0 ID=cds-WP_025304773.1;Parent=gene-IY40_RS14025;Dbxref=GenBank:WP_025304773.1;Name=WP_025304773.1;Ontology_term=GO:0003824,GO:0016853;gbkey=CDS;go_function=catalytic activity|0003824||IEA,isomerase activity|0016853||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006321735.1;locus_tag=IY40_RS14025;product=sugar phosphate isomerase/epimerase family protein;protein_id=WP_025304773.1;transl_table=11 NZ_JPQY01000022.1 RefSeq gene 71636 72670 . - . ID=gene-IY40_RS14030;Name=IY40_RS14030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS14030;old_locus_tag=IY40_14280 NZ_JPQY01000022.1 Protein Homology CDS 71636 72670 . - 0 ID=cds-WP_025304774.1;Parent=gene-IY40_RS14030;Dbxref=GenBank:WP_025304774.1;Name=WP_025304774.1;Ontology_term=GO:0006351,GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=DNA-templated transcription|0006351||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013810942.1;locus_tag=IY40_RS14030;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_025304774.1;transl_table=11 NZ_JPQY01000022.1 RefSeq gene 72795 73457 . - . ID=gene-IY40_RS14035;Name=IY40_RS14035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS14035;old_locus_tag=IY40_14285 NZ_JPQY01000022.1 Protein Homology CDS 72795 73457 . - 0 ID=cds-WP_043140741.1;Parent=gene-IY40_RS14035;Dbxref=GenBank:WP_043140741.1;Name=WP_043140741.1;Ontology_term=GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462546.1;locus_tag=IY40_RS14035;product=OmpA family lipoprotein;protein_id=WP_043140741.1;transl_table=11 NZ_JPQY01000022.1 RefSeq gene 73704 74156 . - . ID=gene-IY40_RS14040;Name=IY40_RS14040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS14040;old_locus_tag=IY40_14290 NZ_JPQY01000022.1 Protein Homology CDS 73704 74156 . - 0 ID=cds-WP_043140746.1;Parent=gene-IY40_RS14040;Dbxref=GenBank:WP_043140746.1;Name=WP_043140746.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019455514.1;locus_tag=IY40_RS14040;product=N-acetyltransferase;protein_id=WP_043140746.1;transl_table=11 NZ_JPQY01000022.1 RefSeq gene 74153 74719 . - . ID=gene-IY40_RS14045;Name=IY40_RS14045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS14045;old_locus_tag=IY40_14295 NZ_JPQY01000022.1 Protein Homology CDS 74153 74719 . - 0 ID=cds-WP_025304776.1;Parent=gene-IY40_RS14045;Dbxref=GenBank:WP_025304776.1;Name=WP_025304776.1;Ontology_term=GO:0006284,GO:0008725;gbkey=CDS;go_function=DNA-3-methyladenine glycosylase activity|0008725||IEA;go_process=base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016929581.1;locus_tag=IY40_RS14045;product=DNA-3-methyladenine glycosylase I;protein_id=WP_025304776.1;transl_table=11 NZ_JPQY01000022.1 RefSeq gene 74916 76904 . + . ID=gene-IY40_RS14050;Name=IY40_RS14050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS14050;old_locus_tag=IY40_14300 NZ_JPQY01000022.1 Protein Homology CDS 74916 76904 . + 0 ID=cds-WP_043140750.1;Parent=gene-IY40_RS14050;Dbxref=GenBank:WP_043140750.1;Name=WP_043140750.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004950619.1;locus_tag=IY40_RS14050;product=autotransporter domain-containing esterase;protein_id=WP_043140750.1;transl_table=11 NZ_JPQY01000022.1 RefSeq gene 77235 77414 . + . ID=gene-IY40_RS26005;Name=IY40_RS26005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS26005 NZ_JPQY01000022.1 GeneMarkS-2+ CDS 77235 77414 . + 0 ID=cds-WP_127146956.1;Parent=gene-IY40_RS26005;Dbxref=GenBank:WP_127146956.1;Name=WP_127146956.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IY40_RS26005;product=hypothetical protein;protein_id=WP_127146956.1;transl_table=11 NZ_JPQY01000022.1 RefSeq gene 77636 78553 . + . ID=gene-IY40_RS14055;Name=glyQ;gbkey=Gene;gene=glyQ;gene_biotype=protein_coding;locus_tag=IY40_RS14055;old_locus_tag=IY40_14305 NZ_JPQY01000022.1 Protein Homology CDS 77636 78553 . + 0 ID=cds-WP_043140757.1;Parent=gene-IY40_RS14055;Dbxref=GenBank:WP_043140757.1;Name=WP_043140757.1;Ontology_term=GO:0006426,GO:0000166,GO:0004820,GO:0005524,GO:0005737;gbkey=CDS;gene=glyQ;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,glycine-tRNA ligase activity|0004820||IEA,ATP binding|0005524||IEA;go_process=glycyl-tRNA aminoacylation|0006426||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004933966.1;locus_tag=IY40_RS14055;product=glycine--tRNA ligase subunit alpha;protein_id=WP_043140757.1;transl_table=11 NZ_JPQY01000022.1 RefSeq gene 78563 80632 . + . ID=gene-IY40_RS14060;Name=glyS;gbkey=Gene;gene=glyS;gene_biotype=protein_coding;locus_tag=IY40_RS14060;old_locus_tag=IY40_14310 NZ_JPQY01000022.1 Protein Homology CDS 78563 80632 . + 0 ID=cds-WP_043140760.1;Parent=gene-IY40_RS14060;Dbxref=GenBank:WP_043140760.1;Name=WP_043140760.1;Ontology_term=GO:0006426,GO:0000166,GO:0004820,GO:0005524,GO:0005737;gbkey=CDS;gene=glyS;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,glycine-tRNA ligase activity|0004820||IEA,ATP binding|0005524||IEA;go_process=glycyl-tRNA aminoacylation|0006426||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001291772.1;locus_tag=IY40_RS14060;product=glycine--tRNA ligase subunit beta;protein_id=WP_043140760.1;transl_table=11 NZ_JPQY01000022.1 RefSeq gene 80952 81671 . + . ID=gene-IY40_RS14065;Name=IY40_RS14065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS14065;old_locus_tag=IY40_14315 NZ_JPQY01000022.1 Protein Homology CDS 80952 81671 . + 0 ID=cds-WP_025304780.1;Parent=gene-IY40_RS14065;Dbxref=GenBank:WP_025304780.1;Name=WP_025304780.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019455519.1;locus_tag=IY40_RS14065;product=DUF3053 domain-containing protein;protein_id=WP_025304780.1;transl_table=11 NZ_JPQY01000022.1 RefSeq gene 82214 84133 . + . ID=gene-IY40_RS14070;Name=IY40_RS14070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS14070;old_locus_tag=IY40_14320 NZ_JPQY01000022.1 Protein Homology CDS 82214 84133 . + 0 ID=cds-WP_025304781.1;Parent=gene-IY40_RS14070;Dbxref=GenBank:WP_025304781.1;Name=WP_025304781.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004950639.1;locus_tag=IY40_RS14070;product=PTS mannitol transporter subunit IICBA;protein_id=WP_025304781.1;transl_table=11 NZ_JPQY01000022.1 RefSeq gene 84192 85337 . + . ID=gene-IY40_RS14075;Name=IY40_RS14075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS14075;old_locus_tag=IY40_14325 NZ_JPQY01000022.1 Protein Homology CDS 84192 85337 . + 0 ID=cds-WP_043140764.1;Parent=gene-IY40_RS14075;Dbxref=GenBank:WP_043140764.1;Name=WP_043140764.1;Ontology_term=GO:0019594,GO:0008926;gbkey=CDS;go_function=mannitol-1-phosphate 5-dehydrogenase activity|0008926||IEA;go_process=mannitol metabolic process|0019594||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015344027.1;locus_tag=IY40_RS14075;product=mannitol-1-phosphate 5-dehydrogenase;protein_id=WP_043140764.1;transl_table=11 NZ_JPQY01000022.1 RefSeq gene 85432 85983 . + . ID=gene-IY40_RS14080;Name=IY40_RS14080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS14080;old_locus_tag=IY40_14330 NZ_JPQY01000022.1 Protein Homology CDS 85432 85983 . + 0 ID=cds-WP_016929575.1;Parent=gene-IY40_RS14080;Dbxref=GenBank:WP_016929575.1;Name=WP_016929575.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209619.1;locus_tag=IY40_RS14080;product=MltR family transcriptional regulator;protein_id=WP_016929575.1;transl_table=11 NZ_JPQY01000022.1 RefSeq gene 85980 86588 . - . ID=gene-IY40_RS14085;Name=IY40_RS14085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS14085;old_locus_tag=IY40_14335 NZ_JPQY01000022.1 Protein Homology CDS 85980 86588 . - 0 ID=cds-WP_025304783.1;Parent=gene-IY40_RS14085;Dbxref=GenBank:WP_025304783.1;Name=WP_025304783.1;Ontology_term=GO:0006865,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004933983.1;locus_tag=IY40_RS14085;product=LysE family translocator;protein_id=WP_025304783.1;transl_table=11 NZ_JPQY01000022.1 RefSeq gene 86731 88197 . + . ID=gene-IY40_RS14090;Name=IY40_RS14090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS14090;old_locus_tag=IY40_14340 NZ_JPQY01000022.1 Protein Homology CDS 86731 88197 . + 0 ID=cds-WP_025304784.1;Parent=gene-IY40_RS14090;Dbxref=GenBank:WP_025304784.1;Name=WP_025304784.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019455522.1;locus_tag=IY40_RS14090;product=aminotransferase-like domain-containing protein;protein_id=WP_025304784.1;transl_table=11 NZ_JPQY01000022.1 RefSeq gene 88271 88633 . + . ID=gene-IY40_RS14095;Name=IY40_RS14095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS14095;old_locus_tag=IY40_14345 NZ_JPQY01000022.1 Protein Homology CDS 88271 88633 . + 0 ID=cds-WP_025304785.1;Parent=gene-IY40_RS14095;Dbxref=GenBank:WP_025304785.1;Name=WP_025304785.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019455523.1;locus_tag=IY40_RS14095;product=YibL family ribosome-associated protein;protein_id=WP_025304785.1;transl_table=11 NZ_JPQY01000022.1 RefSeq gene 88645 89424 . - . ID=gene-IY40_RS14100;Name=IY40_RS14100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS14100;old_locus_tag=IY40_14350 NZ_JPQY01000022.1 Protein Homology CDS 88645 89424 . - 0 ID=cds-WP_043140768.1;Parent=gene-IY40_RS14100;Dbxref=GenBank:WP_043140768.1;Name=WP_043140768.1;Ontology_term=GO:0008168,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019455524.1;locus_tag=IY40_RS14100;product=class I SAM-dependent methyltransferase;protein_id=WP_043140768.1;transl_table=11 NZ_JPQY01000022.1 RefSeq gene 89527 90198 . - . ID=gene-IY40_RS14105;Name=yiiM;gbkey=Gene;gene=yiiM;gene_biotype=protein_coding;locus_tag=IY40_RS14105;old_locus_tag=IY40_14355 NZ_JPQY01000022.1 Protein Homology CDS 89527 90198 . - 0 ID=cds-WP_025304787.1;Parent=gene-IY40_RS14105;Dbxref=GenBank:WP_025304787.1;Name=WP_025304787.1;Ontology_term=GO:0003824,GO:0030151,GO:0030170;gbkey=CDS;gene=yiiM;go_function=catalytic activity|0003824||IEA,molybdenum ion binding|0030151||IEA,pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004933993.1;locus_tag=IY40_RS14105;product=6-hydroxyaminopurine reductase;protein_id=WP_025304787.1;transl_table=11 NZ_JPQY01000022.1 RefSeq gene 90297 92225 . - . ID=gene-IY40_RS14110;Name=IY40_RS14110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS14110;old_locus_tag=IY40_14360 NZ_JPQY01000022.1 Protein Homology CDS 90297 92225 . - 0 ID=cds-WP_025304788.1;Parent=gene-IY40_RS14110;Dbxref=GenBank:WP_025304788.1;Name=WP_025304788.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017891174.1;locus_tag=IY40_RS14110;product=methyl-accepting chemotaxis protein;protein_id=WP_025304788.1;transl_table=11 NZ_JPQY01000022.1 RefSeq gene 92351 92971 . - . ID=gene-IY40_RS14115;Name=sodA;gbkey=Gene;gene=sodA;gene_biotype=protein_coding;locus_tag=IY40_RS14115;old_locus_tag=IY40_14365 NZ_JPQY01000022.1 Protein Homology CDS 92351 92971 . - 0 ID=cds-WP_004934003.1;Parent=gene-IY40_RS14115;Dbxref=GenBank:WP_004934003.1;Name=WP_004934003.1;Ontology_term=GO:0006801,GO:0004784;gbkey=CDS;gene=sodA;go_function=superoxide dismutase activity|0004784||IEA;go_process=superoxide metabolic process|0006801||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013650637.1;locus_tag=IY40_RS14115;product=superoxide dismutase [Mn];protein_id=WP_004934003.1;transl_table=11 NZ_JPQY01000022.1 RefSeq gene 93389 96436 . + . ID=gene-IY40_RS14125;Name=fdnG;gbkey=Gene;gene=fdnG;gene_biotype=protein_coding;locus_tag=IY40_RS14125;old_locus_tag=IY40_14375 NZ_JPQY01000022.1 Protein Homology CDS 93389 96436 . + 0 ID=cds-WP_086013585.1;Parent=gene-IY40_RS14125;Dbxref=GenBank:WP_086013585.1;Name=WP_086013585.1;Ontology_term=GO:0015942,GO:0008863,GO:0009055,GO:0043546,GO:0047111,GO:0009326;gbkey=CDS;gene=fdnG;go_component=formate dehydrogenase complex|0009326||IEA;go_function=formate dehydrogenase (NAD+) activity|0008863||IEA,electron transfer activity|0009055||IEA,molybdopterin cofactor binding|0043546||IEA,formate dehydrogenase (cytochrome-c-553) activity|0047111||IEA;go_process=formate metabolic process|0015942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462917.1;locus_tag=IY40_RS14125;product=formate dehydrogenase-N subunit alpha;protein_id=WP_086013585.1;transl_except=(pos:93974..93976%2Caa:Sec);transl_table=11 NZ_JPQY01000022.1 RefSeq gene 96449 97351 . + . ID=gene-IY40_RS14130;Name=fdxH;gbkey=Gene;gene=fdxH;gene_biotype=protein_coding;locus_tag=IY40_RS14130;old_locus_tag=IY40_14380 NZ_JPQY01000022.1 Protein Homology CDS 96449 97351 . + 0 ID=cds-WP_004934014.1;Parent=gene-IY40_RS14130;Dbxref=GenBank:WP_004934014.1;Name=WP_004934014.1;Ontology_term=GO:0015944,GO:0008863,GO:0051539,GO:0016020;gbkey=CDS;gene=fdxH;go_component=membrane|0016020||IEA;go_function=formate dehydrogenase (NAD+) activity|0008863||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=formate oxidation|0015944||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006317209.1;locus_tag=IY40_RS14130;product=formate dehydrogenase subunit beta;protein_id=WP_004934014.1;transl_table=11 NZ_JPQY01000022.1 RefSeq gene 97348 97983 . + . ID=gene-IY40_RS14135;Name=fdoI;gbkey=Gene;gene=fdoI;gene_biotype=protein_coding;locus_tag=IY40_RS14135;old_locus_tag=IY40_14385 NZ_JPQY01000022.1 Protein Homology CDS 97348 97983 . + 0 ID=cds-WP_004934017.1;Parent=gene-IY40_RS14135;Dbxref=GenBank:WP_004934017.1;Name=WP_004934017.1;gbkey=CDS;gene=fdoI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013650634.1;locus_tag=IY40_RS14135;product=formate dehydrogenase cytochrome b556 subunit;protein_id=WP_004934017.1;transl_table=11 NZ_JPQY01000022.1 RefSeq gene 97983 98912 . + . ID=gene-IY40_RS14140;Name=fdhE;gbkey=Gene;gene=fdhE;gene_biotype=protein_coding;locus_tag=IY40_RS14140;old_locus_tag=IY40_14390 NZ_JPQY01000022.1 Protein Homology CDS 97983 98912 . + 0 ID=cds-WP_043140774.1;Parent=gene-IY40_RS14140;Dbxref=GenBank:WP_043140774.1;Name=WP_043140774.1;gbkey=CDS;gene=fdhE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005271637.1;locus_tag=IY40_RS14140;product=formate dehydrogenase accessory protein FdhE;protein_id=WP_043140774.1;transl_table=11 NZ_JPQY01000022.1 RefSeq gene 99027 99674 . + . ID=gene-IY40_RS14145;Name=IY40_RS14145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS14145;old_locus_tag=IY40_14395 NZ_JPQY01000022.1 Protein Homology CDS 99027 99674 . + 0 ID=cds-WP_025304791.1;Parent=gene-IY40_RS14145;Dbxref=GenBank:WP_025304791.1;Name=WP_025304791.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013810965.1;locus_tag=IY40_RS14145;product=DcrB-related protein;protein_id=WP_025304791.1;transl_table=11 NZ_JPQY01000022.1 RefSeq gene 99715 100320 . + . ID=gene-IY40_RS14150;Name=IY40_RS14150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS14150;old_locus_tag=IY40_14400 NZ_JPQY01000022.1 Protein Homology CDS 99715 100320 . + 0 ID=cds-WP_025304792.1;Parent=gene-IY40_RS14150;Dbxref=GenBank:WP_025304792.1;Name=WP_025304792.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004950683.1;locus_tag=IY40_RS14150;product=glutathione S-transferase;protein_id=WP_025304792.1;transl_table=11 NZ_JPQY01000022.1 RefSeq gene 100390 101784 . + . ID=gene-IY40_RS14155;Name=selA;gbkey=Gene;gene=selA;gene_biotype=protein_coding;locus_tag=IY40_RS14155;old_locus_tag=IY40_14405 NZ_JPQY01000022.1 Protein Homology CDS 100390 101784 . + 0 ID=cds-WP_043140778.1;Parent=gene-IY40_RS14155;Dbxref=GenBank:WP_043140778.1;Name=WP_043140778.1;Ontology_term=GO:0001514,GO:0004125,GO:0005737;gbkey=CDS;gene=selA;go_component=cytoplasm|0005737||IEA;go_function=L-seryl-tRNA(Sec) selenium transferase activity|0004125||IEA;go_process=selenocysteine incorporation|0001514||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015376174.1;locus_tag=IY40_RS14155;product=L-seryl-tRNA(Sec) selenium transferase;protein_id=WP_043140778.1;transl_table=11 NZ_JPQY01000022.1 RefSeq gene 101781 103637 . + . ID=gene-IY40_RS14160;Name=selB;gbkey=Gene;gene=selB;gene_biotype=protein_coding;locus_tag=IY40_RS14160;old_locus_tag=IY40_14410 NZ_JPQY01000022.1 Protein Homology CDS 101781 103637 . + 0 ID=cds-WP_043140781.1;Parent=gene-IY40_RS14160;Dbxref=GenBank:WP_043140781.1;Name=WP_043140781.1;Ontology_term=GO:0001514,GO:0003723,GO:0003746,GO:0003924,GO:0005525,GO:0005737;gbkey=CDS;gene=selB;go_component=cytoplasm|0005737||IEA;go_function=RNA binding|0003723||IEA,translation elongation factor activity|0003746||IEA,GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=selenocysteine incorporation|0001514||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015376175.1;locus_tag=IY40_RS14160;product=selenocysteine-specific translation elongation factor;protein_id=WP_043140781.1;transl_table=11 NZ_JPQY01000022.1 RefSeq gene 103627 104538 . - . ID=gene-IY40_RS14165;Name=IY40_RS14165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS14165;old_locus_tag=IY40_14415 NZ_JPQY01000022.1 Protein Homology CDS 103627 104538 . - 0 ID=cds-WP_043140784.1;Parent=gene-IY40_RS14165;Dbxref=GenBank:WP_043140784.1;Name=WP_043140784.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015376176.1;locus_tag=IY40_RS14165;product=LysR family transcriptional regulator;protein_id=WP_043140784.1;transl_table=11 NZ_JPQY01000022.1 RefSeq gene 104660 105286 . + . ID=gene-IY40_RS14170;Name=IY40_RS14170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS14170;old_locus_tag=IY40_14420 NZ_JPQY01000022.1 Protein Homology CDS 104660 105286 . + 0 ID=cds-WP_043140788.1;Parent=gene-IY40_RS14170;Dbxref=GenBank:WP_043140788.1;Name=WP_043140788.1;Ontology_term=GO:0006865,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015376177.1;locus_tag=IY40_RS14170;product=LysE family translocator;protein_id=WP_043140788.1;transl_table=11 NZ_JPQY01000022.1 RefSeq gene 105341 106588 . - . ID=gene-IY40_RS14175;Name=IY40_RS14175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS14175;old_locus_tag=IY40_14425 NZ_JPQY01000022.1 Protein Homology CDS 105341 106588 . - 0 ID=cds-WP_043140924.1;Parent=gene-IY40_RS14175;Dbxref=GenBank:WP_043140924.1;Name=WP_043140924.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013810971.1;locus_tag=IY40_RS14175;product=MFS transporter;protein_id=WP_043140924.1;transl_table=11 NZ_JPQY01000022.1 RefSeq gene 106806 107798 . + . ID=gene-IY40_RS14180;Name=IY40_RS14180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS14180;old_locus_tag=IY40_14430 NZ_JPQY01000022.1 Protein Homology CDS 106806 107798 . + 0 ID=cds-WP_043140791.1;Parent=gene-IY40_RS14180;Dbxref=GenBank:WP_043140791.1;Name=WP_043140791.1;Ontology_term=GO:0016413,GO:0016747;gbkey=CDS;go_function=O-acetyltransferase activity|0016413||IEA,acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019084164.1;locus_tag=IY40_RS14180;product=acyltransferase;protein_id=WP_043140791.1;transl_table=11 NZ_JPQY01000022.1 RefSeq gene 107793 108716 . - . ID=gene-IY40_RS14185;Name=IY40_RS14185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS14185;old_locus_tag=IY40_14435 NZ_JPQY01000022.1 Protein Homology CDS 107793 108716 . - 0 ID=cds-WP_043140794.1;Parent=gene-IY40_RS14185;Dbxref=GenBank:WP_043140794.1;Name=WP_043140794.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013810973.1;locus_tag=IY40_RS14185;product=GlxA family transcriptional regulator;protein_id=WP_043140794.1;transl_table=11 NZ_JPQY01000022.1 RefSeq gene 108719 109270 . - . ID=gene-IY40_RS14190;Name=IY40_RS14190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS14190;old_locus_tag=IY40_14440 NZ_JPQY01000022.1 Protein Homology CDS 108719 109270 . - 0 ID=cds-WP_043140796.1;Parent=gene-IY40_RS14190;Dbxref=GenBank:WP_043140796.1;Name=WP_043140796.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019455538.1;locus_tag=IY40_RS14190;product=isochorismatase family protein;protein_id=WP_043140796.1;transl_table=11 NZ_JPQY01000022.1 RefSeq gene 109371 110759 . - . ID=gene-IY40_RS14195;Name=IY40_RS14195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS14195;old_locus_tag=IY40_14445 NZ_JPQY01000022.1 Protein Homology CDS 109371 110759 . - 0 ID=cds-WP_043140798.1;Parent=gene-IY40_RS14195;Dbxref=GenBank:WP_043140798.1;Name=WP_043140798.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015376182.1;locus_tag=IY40_RS14195;product=amidohydrolase family protein;protein_id=WP_043140798.1;transl_table=11 NZ_JPQY01000022.1 RefSeq gene 110967 111587 . + . ID=gene-IY40_RS14200;Name=IY40_RS14200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS14200;old_locus_tag=IY40_14450 NZ_JPQY01000022.1 Protein Homology CDS 110967 111587 . + 0 ID=cds-WP_043140802.1;Parent=gene-IY40_RS14200;Dbxref=GenBank:WP_043140802.1;Name=WP_043140802.1;Ontology_term=GO:0016779;gbkey=CDS;go_function=nucleotidyltransferase activity|0016779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016929554.1;locus_tag=IY40_RS14200;product=nucleotidyltransferase domain-containing protein;protein_id=WP_043140802.1;transl_table=11 NZ_JPQY01000022.1 RefSeq gene 111538 111978 . + . ID=gene-IY40_RS14205;Name=IY40_RS14205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS14205;old_locus_tag=IY40_14455 NZ_JPQY01000022.1 Protein Homology CDS 111538 111978 . + 0 ID=cds-WP_043140805.1;Parent=gene-IY40_RS14205;Dbxref=GenBank:WP_043140805.1;Name=WP_043140805.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016929553.1;locus_tag=IY40_RS14205;product=hypothetical protein;protein_id=WP_043140805.1;transl_table=11 NZ_JPQY01000022.1 RefSeq gene 111985 112839 . - . ID=gene-IY40_RS14210;Name=IY40_RS14210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS14210;old_locus_tag=IY40_14460 NZ_JPQY01000022.1 Protein Homology CDS 111985 112839 . - 0 ID=cds-WP_043140808.1;Parent=gene-IY40_RS14210;Dbxref=GenBank:WP_043140808.1;Name=WP_043140808.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006322935.1;locus_tag=IY40_RS14210;product=LysR family transcriptional regulator;protein_id=WP_043140808.1;transl_table=11 NZ_JPQY01000022.1 RefSeq gene 112966 114165 . + . ID=gene-IY40_RS14215;Name=IY40_RS14215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS14215;old_locus_tag=IY40_14465 NZ_JPQY01000022.1 Protein Homology CDS 112966 114165 . + 0 ID=cds-WP_043140811.1;Parent=gene-IY40_RS14215;Dbxref=GenBank:WP_043140811.1;Name=WP_043140811.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006322937.1;locus_tag=IY40_RS14215;product=cyanate transporter;protein_id=WP_043140811.1;transl_table=11 NZ_JPQY01000022.1 RefSeq gene 114241 115584 . + . ID=gene-IY40_RS14220;Name=IY40_RS14220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS14220;old_locus_tag=IY40_14470 NZ_JPQY01000022.1 Protein Homology CDS 114241 115584 . + 0 ID=cds-WP_043140814.1;Parent=gene-IY40_RS14220;Dbxref=GenBank:WP_043140814.1;Name=WP_043140814.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016929550.1;locus_tag=IY40_RS14220;product=esterase-like activity of phytase family protein;protein_id=WP_043140814.1;transl_table=11 NZ_JPQY01000022.1 RefSeq gene 115683 115777 . + . ID=gene-IY40_RS26010;Name=IY40_RS26010;gbkey=Gene;gene_biotype=tRNA;locus_tag=IY40_RS26010 NZ_JPQY01000022.1 tRNAscan-SE tRNA 115683 115777 . + . ID=rna-IY40_RS26010;Parent=gene-IY40_RS26010;anticodon=(pos:115717..115719);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=IY40_RS26010;product=tRNA-Sec NZ_JPQY01000022.1 tRNAscan-SE exon 115683 115777 . + . ID=exon-IY40_RS26010-1;Parent=rna-IY40_RS26010;anticodon=(pos:115717..115719);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=IY40_RS26010;product=tRNA-Sec NZ_JPQY01000022.1 RefSeq gene 116022 117236 . + . ID=gene-IY40_RS14225;Name=IY40_RS14225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS14225;old_locus_tag=IY40_14475 NZ_JPQY01000022.1 Protein Homology CDS 116022 117236 . + 0 ID=cds-WP_043140819.1;Parent=gene-IY40_RS14225;Dbxref=GenBank:WP_043140819.1;Name=WP_043140819.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019455545.1;locus_tag=IY40_RS14225;product=tyrosine-type recombinase/integrase;protein_id=WP_043140819.1;transl_table=11 NZ_JPQY01000022.1 RefSeq gene 117554 117820 . + . ID=gene-IY40_RS14230;Name=IY40_RS14230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS14230;old_locus_tag=IY40_14480 NZ_JPQY01000022.1 Protein Homology CDS 117554 117820 . + 0 ID=cds-WP_043140822.1;Parent=gene-IY40_RS14230;Dbxref=GenBank:WP_043140822.1;Name=WP_043140822.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012414128.1;locus_tag=IY40_RS14230;product=hypothetical protein;protein_id=WP_043140822.1;transl_table=11 NZ_JPQY01000022.1 RefSeq gene 117877 118455 . + . ID=gene-IY40_RS14235;Name=IY40_RS14235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS14235;old_locus_tag=IY40_14485 NZ_JPQY01000022.1 Protein Homology CDS 117877 118455 . + 0 ID=cds-WP_043140826.1;Parent=gene-IY40_RS14235;Dbxref=GenBank:WP_043140826.1;Name=WP_043140826.1;Ontology_term=GO:0009307,GO:0003677,GO:0004519;gbkey=CDS;go_function=DNA binding|0003677||IEA,endonuclease activity|0004519||IEA;go_process=DNA restriction-modification system|0009307||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019455547.1;locus_tag=IY40_RS14235;product=restriction endonuclease subunit S;protein_id=WP_043140826.1;transl_table=11 NZ_JPQY01000022.1 RefSeq gene 118462 119985 . + . ID=gene-IY40_RS14240;Name=IY40_RS14240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS14240;old_locus_tag=IY40_14490 NZ_JPQY01000022.1 Protein Homology CDS 118462 119985 . + 0 ID=cds-WP_043140829.1;Parent=gene-IY40_RS14240;Dbxref=GenBank:WP_043140829.1;Name=WP_043140829.1;Ontology_term=GO:0009307,GO:0003677,GO:0009007;gbkey=CDS;go_function=DNA binding|0003677||IEA,site-specific DNA-methyltransferase (adenine-specific) activity|0009007||IEA;go_process=DNA restriction-modification system|0009307||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007868837.1;locus_tag=IY40_RS14240;product=type I restriction-modification system subunit M;protein_id=WP_043140829.1;transl_table=11 NZ_JPQY01000022.1 RefSeq gene 119975 121144 . + . ID=gene-IY40_RS25330;Name=IY40_RS25330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS25330;old_locus_tag=IY40_14495 NZ_JPQY01000022.1 Protein Homology CDS 119975 121144 . + 0 ID=cds-WP_072008260.1;Parent=gene-IY40_RS25330;Dbxref=GenBank:WP_072008260.1;Name=WP_072008260.1;Ontology_term=GO:0006304,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA modification|0006304||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000173147.1;locus_tag=IY40_RS25330;product=restriction endonuclease subunit S;protein_id=WP_072008260.1;transl_table=11 NZ_JPQY01000022.1 RefSeq gene 121141 122187 . + . ID=gene-IY40_RS14250;Name=IY40_RS14250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS14250;old_locus_tag=IY40_14500 NZ_JPQY01000022.1 Protein Homology CDS 121141 122187 . + 0 ID=cds-WP_043140832.1;Parent=gene-IY40_RS14250;Dbxref=GenBank:WP_043140832.1;Name=WP_043140832.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011193312.1;locus_tag=IY40_RS14250;product=virulence RhuM family protein;protein_id=WP_043140832.1;transl_table=11 NZ_JPQY01000022.1 RefSeq gene 122184 125462 . + . ID=gene-IY40_RS14255;Name=IY40_RS14255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS14255;old_locus_tag=IY40_14505 NZ_JPQY01000022.1 Protein Homology CDS 122184 125462 . + 0 ID=cds-WP_043140835.1;Parent=gene-IY40_RS14255;Dbxref=GenBank:WP_043140835.1;Name=WP_043140835.1;Ontology_term=GO:0009307,GO:0003677,GO:0004386,GO:0005524,GO:0009035,GO:0016887;gbkey=CDS;go_function=DNA binding|0003677||IEA,helicase activity|0004386||IEA,ATP binding|0005524||IEA,type I site-specific deoxyribonuclease activity|0009035||IEA,ATP hydrolysis activity|0016887||IEA;go_process=DNA restriction-modification system|0009307||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019455551.1;locus_tag=IY40_RS14255;product=type I restriction endonuclease subunit R;protein_id=WP_043140835.1;transl_table=11 NZ_JPQY01000022.1 RefSeq gene 125481 126203 . + . ID=gene-IY40_RS14260;Name=IY40_RS14260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS14260;old_locus_tag=IY40_14510 NZ_JPQY01000022.1 Protein Homology CDS 125481 126203 . + 0 ID=cds-WP_043140838.1;Parent=gene-IY40_RS14260;Dbxref=GenBank:WP_043140838.1;Name=WP_043140838.1;Ontology_term=GO:0006508,GO:0008233,GO:0008237,GO:0008270,GO:0016787,GO:0046872;gbkey=CDS;go_function=peptidase activity|0008233||IEA,metallopeptidase activity|0008237||IEA,zinc ion binding|0008270||IEA,hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019455552.1;locus_tag=IY40_RS14260;product=M48 family metallopeptidase;protein_id=WP_043140838.1;transl_table=11 NZ_JPQY01000022.1 RefSeq gene 126339 127253 . + . ID=gene-IY40_RS14265;Name=IY40_RS14265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS14265;old_locus_tag=IY40_14515 NZ_JPQY01000022.1 Protein Homology CDS 126339 127253 . + 0 ID=cds-WP_043140841.1;Parent=gene-IY40_RS14265;Dbxref=GenBank:WP_043140841.1;Name=WP_043140841.1;Ontology_term=GO:0009307,GO:0003677,GO:0004519;gbkey=CDS;go_function=DNA binding|0003677||IEA,endonuclease activity|0004519||IEA;go_process=DNA restriction-modification system|0009307||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418771.1;locus_tag=IY40_RS14265;product=restriction endonuclease;protein_id=WP_043140841.1;transl_table=11 NZ_JPQY01000022.1 RefSeq gene 127435 128055 . - . ID=gene-IY40_RS14270;Name=IY40_RS14270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS14270;old_locus_tag=IY40_14520 NZ_JPQY01000022.1 Protein Homology CDS 127435 128055 . - 0 ID=cds-WP_043140844.1;Parent=gene-IY40_RS14270;Dbxref=GenBank:WP_043140844.1;Name=WP_043140844.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011193309.1;locus_tag=IY40_RS14270;product=inovirus Gp2 family protein;protein_id=WP_043140844.1;transl_table=11 NZ_JPQY01000022.1 RefSeq gene 128710 128931 . - . ID=gene-IY40_RS14275;Name=IY40_RS14275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS14275;old_locus_tag=IY40_14525 NZ_JPQY01000022.1 Protein Homology CDS 128710 128931 . - 0 ID=cds-WP_043140846.1;Parent=gene-IY40_RS14275;Dbxref=GenBank:WP_043140846.1;Name=WP_043140846.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016538289.1;locus_tag=IY40_RS14275;product=helix-turn-helix transcriptional regulator;protein_id=WP_043140846.1;transl_table=11 NZ_JPQY01000022.1 RefSeq gene 129391 130248 . + . ID=gene-IY40_RS14280;Name=IY40_RS14280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS14280;old_locus_tag=IY40_14530 NZ_JPQY01000022.1 GeneMarkS-2+ CDS 129391 130248 . + 0 ID=cds-WP_043140848.1;Parent=gene-IY40_RS14280;Dbxref=GenBank:WP_043140848.1;Name=WP_043140848.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IY40_RS14280;product=hypothetical protein;protein_id=WP_043140848.1;transl_table=11 NZ_JPQY01000022.1 RefSeq gene 130345 131235 . + . ID=gene-IY40_RS14285;Name=IY40_RS14285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS14285;old_locus_tag=IY40_14535 NZ_JPQY01000022.1 Protein Homology CDS 130345 131235 . + 0 ID=cds-WP_235211377.1;Parent=gene-IY40_RS14285;Dbxref=GenBank:WP_235211377.1;Name=WP_235211377.1;Ontology_term=GO:0003924,GO:0005525;gbkey=CDS;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019456486.1;locus_tag=IY40_RS14285;product=GTPase family protein;protein_id=WP_235211377.1;transl_table=11 NZ_JPQY01000022.1 RefSeq gene 131483 132037 . + . ID=gene-IY40_RS14290;Name=IY40_RS14290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS14290;old_locus_tag=IY40_14540 NZ_JPQY01000022.1 Protein Homology CDS 131483 132037 . + 0 ID=cds-WP_043140850.1;Parent=gene-IY40_RS14290;Dbxref=GenBank:WP_043140850.1;Name=WP_043140850.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019456487.1;locus_tag=IY40_RS14290;product=hypothetical protein;protein_id=WP_043140850.1;transl_table=11 NZ_JPQY01000022.1 RefSeq gene 132038 132685 . + . ID=gene-IY40_RS14295;Name=IY40_RS14295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS14295;old_locus_tag=IY40_14545 NZ_JPQY01000022.1 Protein Homology CDS 132038 132685 . + 0 ID=cds-WP_235211378.1;Parent=gene-IY40_RS14295;Dbxref=GenBank:WP_235211378.1;Name=WP_235211378.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019456488.1;locus_tag=IY40_RS14295;product=hypothetical protein;protein_id=WP_235211378.1;transl_table=11 NZ_JPQY01000022.1 RefSeq gene 132868 133347 . + . ID=gene-IY40_RS14300;Name=radC;gbkey=Gene;gene=radC;gene_biotype=protein_coding;locus_tag=IY40_RS14300;old_locus_tag=IY40_14550 NZ_JPQY01000022.1 Protein Homology CDS 132868 133347 . + 0 ID=cds-WP_043140854.1;Parent=gene-IY40_RS14300;Dbxref=GenBank:WP_043140854.1;Name=WP_043140854.1;gbkey=CDS;gene=radC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004707123.1;locus_tag=IY40_RS14300;product=RadC family protein;protein_id=WP_043140854.1;transl_table=11 NZ_JPQY01000022.1 RefSeq gene 133359 133694 . + . ID=gene-IY40_RS25335;Name=IY40_RS25335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS25335 NZ_JPQY01000022.1 Protein Homology CDS 133359 133694 . + 0 ID=cds-WP_072008261.1;Parent=gene-IY40_RS25335;Dbxref=GenBank:WP_072008261.1;Name=WP_072008261.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004707124.1;locus_tag=IY40_RS25335;product=type IV toxin-antitoxin system YeeU family antitoxin;protein_id=WP_072008261.1;transl_table=11 NZ_JPQY01000022.1 RefSeq gene 133759 134127 . + . ID=gene-IY40_RS14305;Name=IY40_RS14305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS14305;old_locus_tag=IY40_14555 NZ_JPQY01000022.1 Protein Homology CDS 133759 134127 . + 0 ID=cds-WP_043140936.1;Parent=gene-IY40_RS14305;Dbxref=GenBank:WP_043140936.1;Name=WP_043140936.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006708728.1;locus_tag=IY40_RS14305;product=TA system toxin CbtA family protein;protein_id=WP_043140936.1;transl_table=11 NZ_JPQY01000022.1 RefSeq gene 134351 135205 . + . ID=gene-IY40_RS14310;Name=IY40_RS14310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS14310;old_locus_tag=IY40_14560 NZ_JPQY01000022.1 Protein Homology CDS 134351 135205 . + 0 ID=cds-WP_043140857.1;Parent=gene-IY40_RS14310;Dbxref=GenBank:WP_043140857.1;Name=WP_043140857.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005165294.1;locus_tag=IY40_RS14310;product=DUF4942 domain-containing protein;protein_id=WP_043140857.1;transl_table=11 NZ_JPQY01000022.1 RefSeq gene 136347 137135 . - . ID=gene-IY40_RS14315;Name=IY40_RS14315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS14315;old_locus_tag=IY40_14570 NZ_JPQY01000022.1 Protein Homology CDS 136347 137135 . - 0 ID=cds-WP_043140861.1;Parent=gene-IY40_RS14315;Dbxref=GenBank:WP_043140861.1;Name=WP_043140861.1;Ontology_term=GO:0009252,GO:0030674,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=protein-macromolecule adaptor activity|0030674||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003850580.1;locus_tag=IY40_RS14315;product=MipA/OmpV family protein;protein_id=WP_043140861.1;transl_table=11 NZ_JPQY01000022.1 RefSeq gene 137263 137961 . + . ID=gene-IY40_RS14320;Name=IY40_RS14320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS14320;old_locus_tag=IY40_14575 NZ_JPQY01000022.1 Protein Homology CDS 137263 137961 . + 0 ID=cds-WP_043140865.1;Parent=gene-IY40_RS14320;Dbxref=GenBank:WP_043140865.1;Name=WP_043140865.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008455681.1;locus_tag=IY40_RS14320;product=response regulator;protein_id=WP_043140865.1;transl_table=11 NZ_JPQY01000022.1 RefSeq gene 137958 139133 . + . ID=gene-IY40_RS14325;Name=IY40_RS14325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS14325;old_locus_tag=IY40_14580 NZ_JPQY01000022.1 Protein Homology CDS 137958 139133 . + 0 ID=cds-WP_025304813.1;Parent=gene-IY40_RS14325;Dbxref=GenBank:WP_025304813.1;Name=WP_025304813.1;Ontology_term=GO:0007165,GO:0000155,GO:0004673,GO:0005524;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007371611.1;locus_tag=IY40_RS14325;product=sensor histidine kinase;protein_id=WP_025304813.1;transl_table=11 NZ_JPQY01000022.1 RefSeq gene 139169 140071 . - . ID=gene-IY40_RS14330;Name=IY40_RS14330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS14330;old_locus_tag=IY40_14585 NZ_JPQY01000022.1 Protein Homology CDS 139169 140071 . - 0 ID=cds-WP_025304814.1;Parent=gene-IY40_RS14330;Dbxref=GenBank:WP_025304814.1;Name=WP_025304814.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015376219.1;locus_tag=IY40_RS14330;product=LysR family transcriptional regulator;protein_id=WP_025304814.1;transl_table=11 NZ_JPQY01000022.1 RefSeq gene 140212 141747 . + . ID=gene-IY40_RS14335;Name=IY40_RS14335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS14335;old_locus_tag=IY40_14590 NZ_JPQY01000022.1 Protein Homology CDS 140212 141747 . + 0 ID=cds-WP_016929546.1;Parent=gene-IY40_RS14335;Dbxref=GenBank:WP_016929546.1;Name=WP_016929546.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004934074.1;locus_tag=IY40_RS14335;product=MFS transporter;protein_id=WP_016929546.1;transl_table=11 NZ_JPQY01000022.1 RefSeq gene 141789 142832 . + . ID=gene-IY40_RS14340;Name=IY40_RS14340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS14340;old_locus_tag=IY40_14595 NZ_JPQY01000022.1 Protein Homology CDS 141789 142832 . + 0 ID=cds-WP_043140870.1;Parent=gene-IY40_RS14340;Dbxref=GenBank:WP_043140870.1;Name=WP_043140870.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004934076.1;locus_tag=IY40_RS14340;product=HlyD family secretion protein;protein_id=WP_043140870.1;transl_table=11 NZ_JPQY01000022.1 RefSeq gene 142829 144274 . + . ID=gene-IY40_RS14345;Name=IY40_RS14345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS14345;old_locus_tag=IY40_14600 NZ_JPQY01000022.1 Protein Homology CDS 142829 144274 . + 0 ID=cds-WP_043140875.1;Parent=gene-IY40_RS14345;Dbxref=GenBank:WP_043140875.1;Name=WP_043140875.1;Ontology_term=GO:0006810,GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004934078.1;locus_tag=IY40_RS14345;product=efflux transporter outer membrane subunit;protein_id=WP_043140875.1;transl_table=11 NZ_JPQY01000022.1 RefSeq gene 144255 145028 . + . ID=gene-IY40_RS14350;Name=IY40_RS14350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS14350;old_locus_tag=IY40_14605 NZ_JPQY01000022.1 Protein Homology CDS 144255 145028 . + 0 ID=cds-WP_043140878.1;Parent=gene-IY40_RS14350;Dbxref=GenBank:WP_043140878.1;Name=WP_043140878.1;Ontology_term=GO:0015891,GO:0071949;gbkey=CDS;go_function=FAD binding|0071949||IEA;go_process=siderophore transport|0015891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019452602.1;locus_tag=IY40_RS14350;product=siderophore-interacting protein;protein_id=WP_043140878.1;transl_table=11 NZ_JPQY01000022.1 RefSeq gene 145050 145493 . + . ID=gene-IY40_RS14355;Name=IY40_RS14355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS14355;old_locus_tag=IY40_14610 NZ_JPQY01000022.1 Protein Homology CDS 145050 145493 . + 0 ID=cds-WP_043140939.1;Parent=gene-IY40_RS14355;Dbxref=GenBank:WP_043140939.1;Name=WP_043140939.1;Ontology_term=GO:0042802;gbkey=CDS;go_function=identical protein binding|0042802||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019452601.1;locus_tag=IY40_RS14355;product=universal stress protein;protein_id=WP_043140939.1;transl_table=11 NZ_JPQY01000022.1 RefSeq gene 145508 146137 . - . ID=gene-IY40_RS14360;Name=IY40_RS14360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS14360;old_locus_tag=IY40_14615 NZ_JPQY01000022.1 GeneMarkS-2+ CDS 145508 146137 . - 0 ID=cds-WP_043140881.1;Parent=gene-IY40_RS14360;Dbxref=GenBank:WP_043140881.1;Name=WP_043140881.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IY40_RS14360;product=OmpA family protein;protein_id=WP_043140881.1;transl_table=11 NZ_JPQY01000022.1 RefSeq gene 146130 147797 . - . ID=gene-IY40_RS14365;Name=IY40_RS14365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS14365;old_locus_tag=IY40_14620 NZ_JPQY01000022.1 GeneMarkS-2+ CDS 146130 147797 . - 0 ID=cds-WP_043140884.1;Parent=gene-IY40_RS14365;Dbxref=GenBank:WP_043140884.1;Name=WP_043140884.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IY40_RS14365;product=hypothetical protein;protein_id=WP_043140884.1;transl_table=11 NZ_JPQY01000022.1 RefSeq gene 147810 148337 . - . ID=gene-IY40_RS14370;Name=tadF;gbkey=Gene;gene=tadF;gene_biotype=protein_coding;locus_tag=IY40_RS14370;old_locus_tag=IY40_14625 NZ_JPQY01000022.1 Protein Homology CDS 147810 148337 . - 0 ID=cds-WP_072008262.1;Parent=gene-IY40_RS14370;Dbxref=GenBank:WP_072008262.1;Name=WP_072008262.1;gbkey=CDS;gene=tadF;inference=COORDINATES: protein motif:HMM:NF028274.6;locus_tag=IY40_RS14370;product=tight adherence pilus pseudopilin TadF;protein_id=WP_072008262.1;transl_table=11 NZ_JPQY01000022.1 RefSeq gene 148321 148725 . - . ID=gene-IY40_RS14375;Name=IY40_RS14375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS14375;old_locus_tag=IY40_14630 NZ_JPQY01000022.1 GeneMarkS-2+ CDS 148321 148725 . - 0 ID=cds-WP_043140890.1;Parent=gene-IY40_RS14375;Dbxref=GenBank:WP_043140890.1;Name=WP_043140890.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IY40_RS14375;product=hypothetical protein;protein_id=WP_043140890.1;transl_table=11 NZ_JPQY01000022.1 RefSeq gene 148785 149543 . - . ID=gene-IY40_RS14380;Name=IY40_RS14380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS14380;old_locus_tag=IY40_14635 NZ_JPQY01000022.1 GeneMarkS-2+ CDS 148785 149543 . - 0 ID=cds-WP_043140893.1;Parent=gene-IY40_RS14380;Dbxref=GenBank:WP_043140893.1;Name=WP_043140893.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IY40_RS14380;product=tetratricopeptide repeat protein;protein_id=WP_043140893.1;transl_table=11 NZ_JPQY01000022.1 RefSeq gene 149543 150454 . - . ID=gene-IY40_RS14385;Name=IY40_RS14385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS14385;old_locus_tag=IY40_14640 NZ_JPQY01000022.1 Protein Homology CDS 149543 150454 . - 0 ID=cds-WP_043140897.1;Parent=gene-IY40_RS14385;Dbxref=GenBank:WP_043140897.1;Name=WP_043140897.1;Ontology_term=GO:0015628,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: protein motif:HMM:NF012694.6;locus_tag=IY40_RS14385;product=type II secretion system F family protein;protein_id=WP_043140897.1;transl_table=11 NZ_JPQY01000022.1 RefSeq gene 150451 151356 . - . ID=gene-IY40_RS14390;Name=IY40_RS14390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS14390;old_locus_tag=IY40_14645 NZ_JPQY01000022.1 Protein Homology CDS 150451 151356 . - 0 ID=cds-WP_043140900.1;Parent=gene-IY40_RS14390;Dbxref=GenBank:WP_043140900.1;Name=WP_043140900.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: protein motif:HMM:NF012694.6;locus_tag=IY40_RS14390;product=type II secretion system F family protein;protein_id=WP_043140900.1;transl_table=11 NZ_JPQY01000022.1 RefSeq gene 151349 152602 . - . ID=gene-IY40_RS14395;Name=IY40_RS14395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS14395;old_locus_tag=IY40_14650 NZ_JPQY01000022.1 Protein Homology CDS 151349 152602 . - 0 ID=cds-WP_043140903.1;Parent=gene-IY40_RS14395;Dbxref=GenBank:WP_043140903.1;Name=WP_043140903.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: protein motif:HMM:NF012652.7;locus_tag=IY40_RS14395;product=CpaF family protein;protein_id=WP_043140903.1;transl_table=11 NZ_JPQY01000022.1 RefSeq gene 152607 153749 . - . ID=gene-IY40_RS14400;Name=IY40_RS14400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS14400;old_locus_tag=IY40_14655 NZ_JPQY01000022.1 GeneMarkS-2+ CDS 152607 153749 . - 0 ID=cds-WP_142105463.1;Parent=gene-IY40_RS14400;Dbxref=GenBank:WP_142105463.1;Name=WP_142105463.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IY40_RS14400;product=hypothetical protein;protein_id=WP_142105463.1;transl_table=11 NZ_JPQY01000022.1 RefSeq gene 153749 154213 . - . ID=gene-IY40_RS14405;Name=IY40_RS14405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS14405;old_locus_tag=IY40_14660 NZ_JPQY01000022.1 GeneMarkS-2+ CDS 153749 154213 . - 0 ID=cds-WP_043140909.1;Parent=gene-IY40_RS14405;Dbxref=GenBank:WP_043140909.1;Name=WP_043140909.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IY40_RS14405;product=hypothetical protein;protein_id=WP_043140909.1;transl_table=11 NZ_JPQY01000022.1 RefSeq gene 154200 155471 . - . ID=gene-IY40_RS14410;Name=IY40_RS14410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS14410;old_locus_tag=IY40_14665 NZ_JPQY01000022.1 Protein Homology CDS 154200 155471 . - 0 ID=cds-WP_142105465.1;Parent=gene-IY40_RS14410;Dbxref=GenBank:WP_142105465.1;Name=WP_142105465.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012485.6;locus_tag=IY40_RS14410;product=type II and III secretion system protein family protein;protein_id=WP_142105465.1;transl_table=11 NZ_JPQY01000022.1 RefSeq gene 155452 156411 . - . ID=gene-IY40_RS14415;Name=IY40_RS14415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS14415;old_locus_tag=IY40_14670 NZ_JPQY01000022.1 GeneMarkS-2+ CDS 155452 156411 . - 0 ID=cds-WP_043140916.1;Parent=gene-IY40_RS14415;Dbxref=GenBank:WP_043140916.1;Name=WP_043140916.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IY40_RS14415;product=hypothetical protein;protein_id=WP_043140916.1;transl_table=11 NZ_JPQY01000022.1 RefSeq gene 156424 156975 . - . ID=gene-IY40_RS14420;Name=IY40_RS14420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS14420;old_locus_tag=IY40_14675 NZ_JPQY01000022.1 Protein Homology CDS 156424 156975 . - 0 ID=cds-WP_080287137.1;Parent=gene-IY40_RS14420;Dbxref=GenBank:WP_080287137.1;Name=WP_080287137.1;Ontology_term=GO:0006508,GO:0004190;gbkey=CDS;go_function=aspartic-type endopeptidase activity|0004190||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: protein motif:HMM:NF013632.6;locus_tag=IY40_RS14420;product=A24 family peptidase;protein_id=WP_080287137.1;transl_table=11 NZ_JPQY01000022.1 RefSeq gene 156924 157154 . - . ID=gene-IY40_RS14425;Name=IY40_RS14425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS14425 NZ_JPQY01000022.1 Protein Homology CDS 156924 157154 . - 0 ID=cds-WP_049205753.1;Parent=gene-IY40_RS14425;Dbxref=GenBank:WP_049205753.1;Name=WP_049205753.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: protein motif:HMM:NF016828.6;locus_tag=IY40_RS14425;product=Flp family type IVb pilin;protein_id=WP_049205753.1;transl_table=11 ##sequence-region NZ_JPQY01000023.1 1 120378 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=615 NZ_JPQY01000023.1 RefSeq region 1 120378 . + . ID=NZ_JPQY01000023.1:1..120378;Dbxref=taxon:615;collected-by=Mahloro H. Serepa%3B Vincent M. Gray;collection-date=2013-04-11;country=South Africa: North West Province;gbkey=Src;genome=genomic;identified-by=Mahloro H. Serepa%3B Vincent M. Gray;isolation-source=entomopathogenic nematode Oscheius sp. MCB living in soil;mol_type=genomic DNA;nat-host=Oscheius sp. MCB;strain=MCB NZ_JPQY01000023.1 RefSeq gene 275 1138 . - . ID=gene-IY40_RS14430;Name=murI;gbkey=Gene;gene=murI;gene_biotype=protein_coding;locus_tag=IY40_RS14430;old_locus_tag=IY40_14685 NZ_JPQY01000023.1 Protein Homology CDS 275 1138 . - 0 ID=cds-WP_025921004.1;Parent=gene-IY40_RS14430;Dbxref=GenBank:WP_025921004.1;Name=WP_025921004.1;Ontology_term=GO:0008152,GO:0008881;gbkey=CDS;gene=murI;go_function=glutamate racemase activity|0008881||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008807849.1;locus_tag=IY40_RS14430;product=glutamate racemase;protein_id=WP_025921004.1;transl_table=11 NZ_JPQY01000023.1 RefSeq gene 1083 2960 . - . ID=gene-IY40_RS14435;Name=btuB;gbkey=Gene;gene=btuB;gene_biotype=protein_coding;locus_tag=IY40_RS14435;old_locus_tag=IY40_14690 NZ_JPQY01000023.1 Protein Homology CDS 1083 2960 . - 0 ID=cds-WP_043140960.1;Parent=gene-IY40_RS14435;Dbxref=GenBank:WP_043140960.1;Name=WP_043140960.1;Ontology_term=GO:0015889,GO:0015420;gbkey=CDS;gene=btuB;go_function=ABC-type vitamin B12 transporter activity|0015420||IEA;go_process=cobalamin transport|0015889||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015379400.1;locus_tag=IY40_RS14435;product=TonB-dependent vitamin B12 receptor BtuB;protein_id=WP_043140960.1;transl_table=11 NZ_JPQY01000023.1 cmsearch riboswitch 3030 3249 . - . ID=id-NZ_JPQY01000023.1:3030..3249;Dbxref=RFAM:RF00174;Note=cobalamin riboswitch;bound_moiety=adenosylcobalamin;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_JPQY01000023.1 RefSeq gene 3365 4468 . + . ID=gene-IY40_RS14440;Name=trmA;gbkey=Gene;gene=trmA;gene_biotype=protein_coding;locus_tag=IY40_RS14440;old_locus_tag=IY40_14695 NZ_JPQY01000023.1 Protein Homology CDS 3365 4468 . + 0 ID=cds-WP_043140961.1;Parent=gene-IY40_RS14440;Dbxref=GenBank:WP_043140961.1;Name=WP_043140961.1;Ontology_term=GO:0006396,GO:0030697;gbkey=CDS;gene=trmA;go_function=tRNA (uracil(54)-C5)-methyltransferase activity%2C S-adenosyl methionine-dependent|0030697||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019452255.1;locus_tag=IY40_RS14440;product=tRNA (uridine(54)-C5)-methyltransferase TrmA;protein_id=WP_043140961.1;transl_table=11 NZ_JPQY01000023.1 RefSeq gene 4503 4874 . - . ID=gene-IY40_RS14445;Name=IY40_RS14445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS14445;old_locus_tag=IY40_14700 NZ_JPQY01000023.1 Protein Homology CDS 4503 4874 . - 0 ID=cds-WP_025304650.1;Parent=gene-IY40_RS14445;Dbxref=GenBank:WP_025304650.1;Name=WP_025304650.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019452254.1;locus_tag=IY40_RS14445;product=YijD family membrane protein;protein_id=WP_025304650.1;transl_table=11 NZ_JPQY01000023.1 RefSeq gene 4890 5522 . - . ID=gene-IY40_RS14450;Name=fabR;gbkey=Gene;gene=fabR;gene_biotype=protein_coding;locus_tag=IY40_RS14450;old_locus_tag=IY40_14705 NZ_JPQY01000023.1 Protein Homology CDS 4890 5522 . - 0 ID=cds-WP_004931044.1;Parent=gene-IY40_RS14450;Dbxref=GenBank:WP_004931044.1;Name=WP_004931044.1;Ontology_term=GO:0003677;gbkey=CDS;gene=fabR;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019452253.1;locus_tag=IY40_RS14450;product=HTH-type transcriptional repressor FabR;protein_id=WP_004931044.1;transl_table=11 NZ_JPQY01000023.1 RefSeq gene 5741 7138 . + . ID=gene-IY40_RS14455;Name=sthA;gbkey=Gene;gene=sthA;gene_biotype=protein_coding;locus_tag=IY40_RS14455;old_locus_tag=IY40_14710 NZ_JPQY01000023.1 Protein Homology CDS 5741 7138 . + 0 ID=cds-WP_004931047.1;Parent=gene-IY40_RS14455;Dbxref=GenBank:WP_004931047.1;Name=WP_004931047.1;Ontology_term=GO:0045454,GO:0003957,GO:0050660;gbkey=CDS;gene=sthA;go_function=NAD(P)+ transhydrogenase (Si-specific) activity|0003957||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017800705.1;locus_tag=IY40_RS14455;product=Si-specific NAD(P)(+) transhydrogenase;protein_id=WP_004931047.1;transl_table=11 NZ_JPQY01000023.1 RefSeq gene 7121 8038 . - . ID=gene-IY40_RS14460;Name=oxyR;gbkey=Gene;gene=oxyR;gene_biotype=protein_coding;locus_tag=IY40_RS14460;old_locus_tag=IY40_14715 NZ_JPQY01000023.1 Protein Homology CDS 7121 8038 . - 0 ID=cds-WP_025304651.1;Parent=gene-IY40_RS14460;Dbxref=GenBank:WP_025304651.1;Name=WP_025304651.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=oxyR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008457571.1;locus_tag=IY40_RS14460;product=DNA-binding transcriptional regulator OxyR;protein_id=WP_025304651.1;transl_table=11 NZ_JPQY01000023.1 RefSeq gene 8190 8921 . + . ID=gene-IY40_RS14465;Name=IY40_RS14465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS14465;old_locus_tag=IY40_14720 NZ_JPQY01000023.1 Protein Homology CDS 8190 8921 . + 0 ID=cds-WP_015379403.1;Parent=gene-IY40_RS14465;Dbxref=GenBank:WP_015379403.1;Name=WP_015379403.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209479.1;locus_tag=IY40_RS14465;product=glutathione peroxidase;protein_id=WP_015379403.1;transl_table=11 NZ_JPQY01000023.1 RefSeq pseudogene 8994 10442 . + . ID=gene-IY40_RS14470;Name=IY40_RS14470;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IY40_RS14470;old_locus_tag=IY40_14725;pseudo=true NZ_JPQY01000023.1 Protein Homology CDS 8994 10442 . + 0 ID=cds-IY40_RS14470;Parent=gene-IY40_RS14470;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209480.1;locus_tag=IY40_RS14470;product=dihydrolipoyl dehydrogenase;pseudo=true;transl_table=11 NZ_JPQY01000023.1 RefSeq gene 10605 10865 . + . ID=gene-IY40_RS14475;Name=IY40_RS14475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS14475;old_locus_tag=IY40_14730 NZ_JPQY01000023.1 Protein Homology CDS 10605 10865 . + 0 ID=cds-WP_025304653.1;Parent=gene-IY40_RS14475;Dbxref=GenBank:WP_025304653.1;Name=WP_025304653.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004931055.1;locus_tag=IY40_RS14475;product=hypothetical protein;protein_id=WP_025304653.1;transl_table=11 NZ_JPQY01000023.1 RefSeq gene 10852 11178 . + . ID=gene-IY40_RS14480;Name=IY40_RS14480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS14480;old_locus_tag=IY40_14735 NZ_JPQY01000023.1 Protein Homology CDS 10852 11178 . + 0 ID=cds-WP_019452249.1;Parent=gene-IY40_RS14480;Dbxref=GenBank:WP_019452249.1;Name=WP_019452249.1;Ontology_term=GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004931057.1;locus_tag=IY40_RS14480;product=type II toxin-antitoxin system HicB family antitoxin;protein_id=WP_019452249.1;transl_table=11 NZ_JPQY01000023.1 RefSeq gene 11215 12588 . - . ID=gene-IY40_RS14485;Name=argH;gbkey=Gene;gene=argH;gene_biotype=protein_coding;locus_tag=IY40_RS14485;old_locus_tag=IY40_14740 NZ_JPQY01000023.1 Protein Homology CDS 11215 12588 . - 0 ID=cds-WP_043140965.1;Parent=gene-IY40_RS14485;Dbxref=GenBank:WP_043140965.1;Name=WP_043140965.1;Ontology_term=GO:0042450,GO:0004056;gbkey=CDS;gene=argH;go_function=argininosuccinate lyase activity|0004056||IEA;go_process=L-arginine biosynthetic process via ornithine|0042450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004931059.1;locus_tag=IY40_RS14485;product=argininosuccinate lyase;protein_id=WP_043140965.1;transl_table=11 NZ_JPQY01000023.1 RefSeq gene 12658 13878 . - . ID=gene-IY40_RS14490;Name=IY40_RS14490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS14490;old_locus_tag=IY40_14745 NZ_JPQY01000023.1 Protein Homology CDS 12658 13878 . - 0 ID=cds-WP_004931061.1;Parent=gene-IY40_RS14490;Dbxref=GenBank:WP_004931061.1;Name=WP_004931061.1;Ontology_term=GO:0006526,GO:0004055,GO:0005524;gbkey=CDS;go_function=argininosuccinate synthase activity|0004055||IEA,ATP binding|0005524||IEA;go_process=L-arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012147453.1;locus_tag=IY40_RS14490;product=argininosuccinate synthase;protein_id=WP_004931061.1;transl_table=11 NZ_JPQY01000023.1 RefSeq gene 13904 14677 . - . ID=gene-IY40_RS14495;Name=argB;gbkey=Gene;gene=argB;gene_biotype=protein_coding;locus_tag=IY40_RS14495;old_locus_tag=IY40_14750 NZ_JPQY01000023.1 Protein Homology CDS 13904 14677 . - 0 ID=cds-WP_016929723.1;Parent=gene-IY40_RS14495;Dbxref=GenBank:WP_016929723.1;Name=WP_016929723.1;Ontology_term=GO:0006592,GO:0003991,GO:0005737;gbkey=CDS;gene=argB;go_component=cytoplasm|0005737||IEA;go_function=acetylglutamate kinase activity|0003991||IEA;go_process=ornithine biosynthetic process|0006592||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004710562.1;locus_tag=IY40_RS14495;product=acetylglutamate kinase;protein_id=WP_016929723.1;transl_table=11 NZ_JPQY01000023.1 RefSeq gene 14698 15702 . - . ID=gene-IY40_RS14500;Name=argC;gbkey=Gene;gene=argC;gene_biotype=protein_coding;locus_tag=IY40_RS14500;old_locus_tag=IY40_14755 NZ_JPQY01000023.1 Protein Homology CDS 14698 15702 . - 0 ID=cds-WP_025304655.1;Parent=gene-IY40_RS14500;Dbxref=GenBank:WP_025304655.1;Name=WP_025304655.1;Ontology_term=GO:0006526,GO:0006592,GO:0003942,GO:0070401;gbkey=CDS;gene=argC;go_function=N-acetyl-gamma-glutamyl-phosphate reductase activity|0003942||IEA,NADP+ binding|0070401||IEA;go_process=L-arginine biosynthetic process|0006526||IEA,ornithine biosynthetic process|0006592||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005278246.1;locus_tag=IY40_RS14500;product=N-acetyl-gamma-glutamyl-phosphate reductase;protein_id=WP_025304655.1;transl_table=11 NZ_JPQY01000023.1 RefSeq gene 15919 17064 . + . ID=gene-IY40_RS14505;Name=argE;gbkey=Gene;gene=argE;gene_biotype=protein_coding;locus_tag=IY40_RS14505;old_locus_tag=IY40_14760 NZ_JPQY01000023.1 Protein Homology CDS 15919 17064 . + 0 ID=cds-WP_038630012.1;Parent=gene-IY40_RS14505;Dbxref=GenBank:WP_038630012.1;Name=WP_038630012.1;Ontology_term=GO:0006526,GO:0019213;gbkey=CDS;gene=argE;go_function=deacetylase activity|0019213||IEA;go_process=L-arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006317763.1;locus_tag=IY40_RS14505;product=acetylornithine deacetylase;protein_id=WP_038630012.1;transl_table=11 NZ_JPQY01000023.1 RefSeq gene 17322 19958 . + . ID=gene-IY40_RS14510;Name=ppc;gbkey=Gene;gene=ppc;gene_biotype=protein_coding;locus_tag=IY40_RS14510;old_locus_tag=IY40_14765 NZ_JPQY01000023.1 Protein Homology CDS 17322 19958 . + 0 ID=cds-WP_025304657.1;Parent=gene-IY40_RS14510;Dbxref=GenBank:WP_025304657.1;Name=WP_025304657.1;Ontology_term=GO:0006099,GO:0015977,GO:0008964;gbkey=CDS;gene=ppc;go_function=phosphoenolpyruvate carboxylase activity|0008964||IEA;go_process=tricarboxylic acid cycle|0006099||IEA,carbon fixation|0015977||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709756.1;locus_tag=IY40_RS14510;product=phosphoenolpyruvate carboxylase;protein_id=WP_025304657.1;transl_table=11 NZ_JPQY01000023.1 RefSeq gene 20065 20961 . - . ID=gene-IY40_RS14515;Name=metF;gbkey=Gene;gene=metF;gene_biotype=protein_coding;locus_tag=IY40_RS14515;old_locus_tag=IY40_14770 NZ_JPQY01000023.1 Protein Homology CDS 20065 20961 . - 0 ID=cds-WP_043140967.1;Parent=gene-IY40_RS14515;Dbxref=GenBank:WP_043140967.1;Name=WP_043140967.1;Ontology_term=GO:0009086,GO:0004489;gbkey=CDS;gene=metF;go_function=methylenetetrahydrofolate reductase [NAD(P)H] activity|0004489||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015962312.1;locus_tag=IY40_RS14515;product=methylenetetrahydrofolate reductase;protein_id=WP_043140967.1;transl_table=11 NZ_JPQY01000023.1 RefSeq gene 21191 23626 . - . ID=gene-IY40_RS14520;Name=IY40_RS14520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS14520;old_locus_tag=IY40_14775 NZ_JPQY01000023.1 Protein Homology CDS 21191 23626 . - 0 ID=cds-WP_043140969.1;Parent=gene-IY40_RS14520;Dbxref=GenBank:WP_043140969.1;Name=WP_043140969.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013649013.1;locus_tag=IY40_RS14520;product=bifunctional aspartate kinase/homoserine dehydrogenase II;protein_id=WP_043140969.1;transl_table=11 NZ_JPQY01000023.1 RefSeq gene 23629 24789 . - . ID=gene-IY40_RS14525;Name=metB;gbkey=Gene;gene=metB;gene_biotype=protein_coding;locus_tag=IY40_RS14525;old_locus_tag=IY40_14780 NZ_JPQY01000023.1 Protein Homology CDS 23629 24789 . - 0 ID=cds-WP_025304659.1;Parent=gene-IY40_RS14525;Dbxref=GenBank:WP_025304659.1;Name=WP_025304659.1;Ontology_term=GO:0019346,GO:0003824,GO:0030170;gbkey=CDS;gene=metB;go_function=catalytic activity|0003824||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=transsulfuration|0019346||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019452240.1;locus_tag=IY40_RS14525;product=cystathionine gamma-synthase;protein_id=WP_025304659.1;transl_table=11 NZ_JPQY01000023.1 RefSeq gene 25094 25411 . + . ID=gene-IY40_RS14530;Name=metJ;gbkey=Gene;gene=metJ;gene_biotype=protein_coding;locus_tag=IY40_RS14530;old_locus_tag=IY40_14785 NZ_JPQY01000023.1 Protein Homology CDS 25094 25411 . + 0 ID=cds-WP_006317756.1;Parent=gene-IY40_RS14530;Dbxref=GenBank:WP_006317756.1;Name=WP_006317756.1;gbkey=CDS;gene=metJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015855437.1;locus_tag=IY40_RS14530;product=met regulon transcriptional regulator MetJ;protein_id=WP_006317756.1;transl_table=11 NZ_JPQY01000023.1 RefSeq gene 25489 25704 . - . ID=gene-IY40_RS14535;Name=rpmE;gbkey=Gene;gene=rpmE;gene_biotype=protein_coding;locus_tag=IY40_RS14535;old_locus_tag=IY40_14790 NZ_JPQY01000023.1 Protein Homology CDS 25489 25704 . - 0 ID=cds-WP_004931078.1;Parent=gene-IY40_RS14535;Dbxref=GenBank:WP_004931078.1;Name=WP_004931078.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmE;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010847674.1;locus_tag=IY40_RS14535;product=50S ribosomal protein L31;protein_id=WP_004931078.1;transl_table=11 NZ_JPQY01000023.1 RefSeq gene 25905 28100 . + . ID=gene-IY40_RS14540;Name=priA;gbkey=Gene;gene=priA;gene_biotype=protein_coding;locus_tag=IY40_RS14540;old_locus_tag=IY40_14795 NZ_JPQY01000023.1 Protein Homology CDS 25905 28100 . + 0 ID=cds-WP_043140975.1;Parent=gene-IY40_RS14540;Dbxref=GenBank:WP_043140975.1;Name=WP_043140975.1;gbkey=CDS;gene=priA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005175847.1;locus_tag=IY40_RS14540;product=primosomal protein N';protein_id=WP_043140975.1;transl_table=11 NZ_JPQY01000023.1 RefSeq gene 28392 29420 . + . ID=gene-IY40_RS14545;Name=cytR;gbkey=Gene;gene=cytR;gene_biotype=protein_coding;locus_tag=IY40_RS14545;old_locus_tag=IY40_14800 NZ_JPQY01000023.1 Protein Homology CDS 28392 29420 . + 0 ID=cds-WP_025304661.1;Parent=gene-IY40_RS14545;Dbxref=GenBank:WP_025304661.1;Name=WP_025304661.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=cytR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005163863.1;locus_tag=IY40_RS14545;product=DNA-binding transcriptional regulator CytR;protein_id=WP_025304661.1;transl_table=11 NZ_JPQY01000023.1 RefSeq gene 29486 30421 . + . ID=gene-IY40_RS14550;Name=ftsN;gbkey=Gene;gene=ftsN;gene_biotype=protein_coding;locus_tag=IY40_RS14550;old_locus_tag=IY40_14805 NZ_JPQY01000023.1 Protein Homology CDS 29486 30421 . + 0 ID=cds-WP_043140979.1;Parent=gene-IY40_RS14550;Dbxref=GenBank:WP_043140979.1;Name=WP_043140979.1;Ontology_term=GO:0000910,GO:0005515;gbkey=CDS;gene=ftsN;go_function=protein binding|0005515||IEA;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005175851.1;locus_tag=IY40_RS14550;product=cell division protein FtsN;protein_id=WP_043140979.1;transl_table=11 NZ_JPQY01000023.1 RefSeq gene 30524 31054 . + . ID=gene-IY40_RS14555;Name=hslV;gbkey=Gene;gene=hslV;gene_biotype=protein_coding;locus_tag=IY40_RS14555;old_locus_tag=IY40_14810 NZ_JPQY01000023.1 Protein Homology CDS 30524 31054 . + 0 ID=cds-WP_004931085.1;Parent=gene-IY40_RS14555;Dbxref=GenBank:WP_004931085.1;Name=WP_004931085.1;Ontology_term=GO:0051603,GO:0004298,GO:0009376;gbkey=CDS;gene=hslV;go_component=HslUV protease complex|0009376||IEA;go_function=threonine-type endopeptidase activity|0004298||IEA;go_process=proteolysis involved in protein catabolic process|0051603||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312886.1;locus_tag=IY40_RS14555;product=ATP-dependent protease subunit HslV;protein_id=WP_004931085.1;transl_table=11 NZ_JPQY01000023.1 RefSeq gene 31067 32401 . + . ID=gene-IY40_RS14560;Name=hslU;gbkey=Gene;gene=hslU;gene_biotype=protein_coding;locus_tag=IY40_RS14560;old_locus_tag=IY40_14815 NZ_JPQY01000023.1 Protein Homology CDS 31067 32401 . + 0 ID=cds-WP_025304663.1;Parent=gene-IY40_RS14560;Dbxref=GenBank:WP_025304663.1;Name=WP_025304663.1;Ontology_term=GO:0006508,GO:0004176,GO:0005524,GO:0009376;gbkey=CDS;gene=hslU;go_component=HslUV protease complex|0009376||IEA;go_function=ATP-dependent peptidase activity|0004176||IEA,ATP binding|0005524||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019841241.1;locus_tag=IY40_RS14560;product=HslU--HslV peptidase ATPase subunit;protein_id=WP_025304663.1;transl_table=11 NZ_JPQY01000023.1 RefSeq gene 32498 33415 . + . ID=gene-IY40_RS14565;Name=IY40_RS14565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS14565;old_locus_tag=IY40_14820 NZ_JPQY01000023.1 Protein Homology CDS 32498 33415 . + 0 ID=cds-WP_015379416.1;Parent=gene-IY40_RS14565;Dbxref=GenBank:WP_015379416.1;Name=WP_015379416.1;Ontology_term=GO:0009234,GO:0046428,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=1%2C4-dihydroxy-2-naphthoate polyprenyltransferase activity|0046428||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208944.1;locus_tag=IY40_RS14565;product=1%2C4-dihydroxy-2-naphthoate polyprenyltransferase;protein_id=WP_015379416.1;transl_table=11 NZ_JPQY01000023.1 RefSeq gene 33491 33976 . + . ID=gene-IY40_RS14570;Name=rraA;gbkey=Gene;gene=rraA;gene_biotype=protein_coding;locus_tag=IY40_RS14570;old_locus_tag=IY40_14825 NZ_JPQY01000023.1 Protein Homology CDS 33491 33976 . + 0 ID=cds-WP_004931090.1;Parent=gene-IY40_RS14570;Dbxref=GenBank:WP_004931090.1;Name=WP_004931090.1;Ontology_term=GO:0051252,GO:0008428;gbkey=CDS;gene=rraA;go_function=ribonuclease inhibitor activity|0008428||IEA;go_process=regulation of RNA metabolic process|0051252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001392924.1;locus_tag=IY40_RS14570;product=ribonuclease E activity regulator RraA;protein_id=WP_004931090.1;transl_table=11 NZ_JPQY01000023.1 RefSeq gene 34037 34276 . - . ID=gene-IY40_RS14575;Name=zapB;gbkey=Gene;gene=zapB;gene_biotype=protein_coding;locus_tag=IY40_RS14575;old_locus_tag=IY40_14830 NZ_JPQY01000023.1 Protein Homology CDS 34037 34276 . - 0 ID=cds-WP_004931092.1;Parent=gene-IY40_RS14575;Dbxref=GenBank:WP_004931092.1;Name=WP_004931092.1;gbkey=CDS;gene=zapB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009114846.1;locus_tag=IY40_RS14575;product=septal ring assembly protein ZapB;protein_id=WP_004931092.1;transl_table=11 NZ_JPQY01000023.1 RefSeq gene 34801 35646 . + . ID=gene-IY40_RS14580;Name=IY40_RS14580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS14580;old_locus_tag=IY40_14835 NZ_JPQY01000023.1 Protein Homology CDS 34801 35646 . + 0 ID=cds-WP_004931095.1;Parent=gene-IY40_RS14580;Dbxref=GenBank:WP_004931095.1;Name=WP_004931095.1;Ontology_term=GO:0055085,GO:0015267;gbkey=CDS;go_function=channel activity|0015267||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016266314.1;locus_tag=IY40_RS14580;product=MIP/aquaporin family protein;protein_id=WP_004931095.1;transl_table=11 NZ_JPQY01000023.1 RefSeq gene 35689 37197 . + . ID=gene-IY40_RS14585;Name=glpK;gbkey=Gene;gene=glpK;gene_biotype=protein_coding;locus_tag=IY40_RS14585;old_locus_tag=IY40_14840 NZ_JPQY01000023.1 Protein Homology CDS 35689 37197 . + 0 ID=cds-WP_025304664.1;Parent=gene-IY40_RS14585;Dbxref=GenBank:WP_025304664.1;Name=WP_025304664.1;Ontology_term=GO:0006072,GO:0004370;gbkey=CDS;gene=glpK;go_function=glycerol kinase activity|0004370||IEA;go_process=glycerol-3-phosphate metabolic process|0006072||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005290956.1;locus_tag=IY40_RS14585;product=glycerol kinase GlpK;protein_id=WP_025304664.1;transl_table=11 NZ_JPQY01000023.1 RefSeq gene 37328 38338 . + . ID=gene-IY40_RS14590;Name=glpX;gbkey=Gene;gene=glpX;gene_biotype=protein_coding;locus_tag=IY40_RS14590;old_locus_tag=IY40_14845 NZ_JPQY01000023.1 Protein Homology CDS 37328 38338 . + 0 ID=cds-WP_025304665.1;Parent=gene-IY40_RS14590;Dbxref=GenBank:WP_025304665.1;Name=WP_025304665.1;Ontology_term=GO:0006071,GO:0006094,GO:0042132;gbkey=CDS;gene=glpX;go_function=fructose 1%2C6-bisphosphate 1-phosphatase activity|0042132||IEA;go_process=glycerol metabolic process|0006071||IEA,gluconeogenesis|0006094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015379418.1;locus_tag=IY40_RS14590;product=class II fructose-bisphosphatase;protein_id=WP_025304665.1;transl_table=11 NZ_JPQY01000023.1 RefSeq gene 38533 39717 . - . ID=gene-IY40_RS14595;Name=emrD;gbkey=Gene;gene=emrD;gene_biotype=protein_coding;locus_tag=IY40_RS14595;old_locus_tag=IY40_14850 NZ_JPQY01000023.1 Protein Homology CDS 38533 39717 . - 0 ID=cds-WP_025304666.1;Parent=gene-IY40_RS14595;Dbxref=GenBank:WP_025304666.1;Name=WP_025304666.1;Ontology_term=GO:0042908,GO:0042910,GO:0016020;gbkey=CDS;gene=emrD;go_component=membrane|0016020||IEA;go_function=xenobiotic transmembrane transporter activity|0042910||IEA;go_process=xenobiotic transport|0042908||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006317746.1;locus_tag=IY40_RS14595;product=multidrug efflux MFS transporter EmrD;protein_id=WP_025304666.1;transl_table=11 NZ_JPQY01000023.1 RefSeq gene 40015 40626 . + . ID=gene-IY40_RS14600;Name=IY40_RS14600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS14600;old_locus_tag=IY40_14855 NZ_JPQY01000023.1 Protein Homology CDS 40015 40626 . + 0 ID=cds-WP_043140982.1;Parent=gene-IY40_RS14600;Dbxref=GenBank:WP_043140982.1;Name=WP_043140982.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815001.1;locus_tag=IY40_RS14600;product=helix-turn-helix transcriptional regulator;protein_id=WP_043140982.1;transl_table=11 NZ_JPQY01000023.1 RefSeq gene 40630 41376 . + . ID=gene-IY40_RS14605;Name=fpr;gbkey=Gene;gene=fpr;gene_biotype=protein_coding;locus_tag=IY40_RS14605;old_locus_tag=IY40_14860 NZ_JPQY01000023.1 Protein Homology CDS 40630 41376 . + 0 ID=cds-WP_043140987.1;Parent=gene-IY40_RS14605;Dbxref=GenBank:WP_043140987.1;Name=WP_043140987.1;Ontology_term=GO:0004324;gbkey=CDS;gene=fpr;go_function=ferredoxin-NADP+ reductase activity|0004324||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208956.1;locus_tag=IY40_RS14605;product=ferredoxin--NADP(+) reductase;protein_id=WP_043140987.1;transl_table=11 NZ_JPQY01000023.1 RefSeq gene 41388 41807 . - . ID=gene-IY40_RS14610;Name=IY40_RS14610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS14610;old_locus_tag=IY40_14865 NZ_JPQY01000023.1 Protein Homology CDS 41388 41807 . - 0 ID=cds-WP_043140990.1;Parent=gene-IY40_RS14610;Dbxref=GenBank:WP_043140990.1;Name=WP_043140990.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004931108.1;locus_tag=IY40_RS14610;product=DUF805 domain-containing protein;protein_id=WP_043140990.1;transl_table=11 NZ_JPQY01000023.1 RefSeq gene 42007 42591 . + . ID=gene-IY40_RS14615;Name=IY40_RS14615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS14615;old_locus_tag=IY40_14870 NZ_JPQY01000023.1 Protein Homology CDS 42007 42591 . + 0 ID=cds-WP_043140996.1;Parent=gene-IY40_RS14615;Dbxref=GenBank:WP_043140996.1;Name=WP_043140996.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815003.1;locus_tag=IY40_RS14615;product=DUF1454 family protein;protein_id=WP_043140996.1;transl_table=11 NZ_JPQY01000023.1 RefSeq gene 42719 43486 . + . ID=gene-IY40_RS14620;Name=tpiA;gbkey=Gene;gene=tpiA;gene_biotype=protein_coding;locus_tag=IY40_RS14620;old_locus_tag=IY40_14875 NZ_JPQY01000023.1 Protein Homology CDS 42719 43486 . + 0 ID=cds-WP_004931113.1;Parent=gene-IY40_RS14620;Dbxref=GenBank:WP_004931113.1;Name=WP_004931113.1;Ontology_term=GO:0006096,GO:0004807;gbkey=CDS;gene=tpiA;go_function=triose-phosphate isomerase activity|0004807||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005175887.1;locus_tag=IY40_RS14620;product=triose-phosphate isomerase;protein_id=WP_004931113.1;transl_table=11 NZ_JPQY01000023.1 RefSeq gene 43552 44541 . - . ID=gene-IY40_RS14625;Name=IY40_RS14625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS14625;old_locus_tag=IY40_14880 NZ_JPQY01000023.1 Protein Homology CDS 43552 44541 . - 0 ID=cds-WP_043140999.1;Parent=gene-IY40_RS14625;Dbxref=GenBank:WP_043140999.1;Name=WP_043140999.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418352.1;locus_tag=IY40_RS14625;product=sulfate ABC transporter substrate-binding protein;protein_id=WP_043140999.1;transl_table=11 NZ_JPQY01000023.1 RefSeq gene 44725 45687 . - . ID=gene-IY40_RS14630;Name=pfkA;gbkey=Gene;gene=pfkA;gene_biotype=protein_coding;locus_tag=IY40_RS14630;old_locus_tag=IY40_14885 NZ_JPQY01000023.1 Protein Homology CDS 44725 45687 . - 0 ID=cds-WP_004931116.1;Parent=gene-IY40_RS14630;Dbxref=GenBank:WP_004931116.1;Name=WP_004931116.1;Ontology_term=GO:0006002,GO:0006096,GO:0005524;gbkey=CDS;gene=pfkA;go_function=ATP binding|0005524||IEA;go_process=fructose 6-phosphate metabolic process|0006002||IEA,glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014072359.1;locus_tag=IY40_RS14630;product=6-phosphofructokinase;protein_id=WP_004931116.1;transl_table=11 NZ_JPQY01000023.1 RefSeq gene 45919 46821 . - . ID=gene-IY40_RS14635;Name=fieF;gbkey=Gene;gene=fieF;gene_biotype=protein_coding;locus_tag=IY40_RS14635;old_locus_tag=IY40_14890 NZ_JPQY01000023.1 Protein Homology CDS 45919 46821 . - 0 ID=cds-WP_043141001.1;Parent=gene-IY40_RS14635;Dbxref=GenBank:WP_043141001.1;Name=WP_043141001.1;Note=FieF%2C a metal efflux transporter%2C is a member of the CDF (cation diffusion facilitator) family of transporters.;Ontology_term=GO:0006812,GO:0055085,GO:0008324,GO:0016020;gbkey=CDS;gene=fieF;go_component=membrane|0016020||IEA;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA;go_process=monoatomic cation transport|0006812||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208967.1;locus_tag=IY40_RS14635;product=CDF family cation-efflux transporter FieF;protein_id=WP_043141001.1;transl_table=11 NZ_JPQY01000023.1 RefSeq gene 46954 47433 . - . ID=gene-IY40_RS14640;Name=cpxP;gbkey=Gene;gene=cpxP;gene_biotype=protein_coding;locus_tag=IY40_RS14640;old_locus_tag=IY40_14895 NZ_JPQY01000023.1 Protein Homology CDS 46954 47433 . - 0 ID=cds-WP_004931122.1;Parent=gene-IY40_RS14640;Dbxref=GenBank:WP_004931122.1;Name=WP_004931122.1;gbkey=CDS;gene=cpxP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016929705.1;locus_tag=IY40_RS14640;product=cell-envelope stress modulator CpxP;protein_id=WP_004931122.1;transl_table=11 NZ_JPQY01000023.1 RefSeq gene 47582 48280 . + . ID=gene-IY40_RS14645;Name=cpxR;gbkey=Gene;gene=cpxR;gene_biotype=protein_coding;locus_tag=IY40_RS14645;old_locus_tag=IY40_14900 NZ_JPQY01000023.1 Protein Homology CDS 47582 48280 . + 0 ID=cds-WP_025304671.1;Parent=gene-IY40_RS14645;Dbxref=GenBank:WP_025304671.1;Name=WP_025304671.1;gbkey=CDS;gene=cpxR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001033718.1;locus_tag=IY40_RS14645;product=envelope stress response regulator transcription factor CpxR;protein_id=WP_025304671.1;transl_table=11 NZ_JPQY01000023.1 RefSeq gene 48277 49671 . + . ID=gene-IY40_RS14650;Name=cpxA;gbkey=Gene;gene=cpxA;gene_biotype=protein_coding;locus_tag=IY40_RS14650;old_locus_tag=IY40_14905 NZ_JPQY01000023.1 Protein Homology CDS 48277 49671 . + 0 ID=cds-WP_015379421.1;Parent=gene-IY40_RS14650;Dbxref=GenBank:WP_015379421.1;Name=WP_015379421.1;Ontology_term=GO:0007165,GO:0000155;gbkey=CDS;gene=cpxA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015379421.1;locus_tag=IY40_RS14650;product=envelope stress sensor histidine kinase CpxA;protein_id=WP_015379421.1;transl_table=11 NZ_JPQY01000023.1 RefSeq gene 49715 50188 . + . ID=gene-IY40_RS14655;Name=trmL;gbkey=Gene;gene=trmL;gene_biotype=protein_coding;locus_tag=IY40_RS14655;old_locus_tag=IY40_14910 NZ_JPQY01000023.1 Protein Homology CDS 49715 50188 . + 0 ID=cds-WP_043141004.1;Parent=gene-IY40_RS14655;Dbxref=GenBank:WP_043141004.1;Name=WP_043141004.1;Ontology_term=GO:0001510,GO:0008173;gbkey=CDS;gene=trmL;go_function=RNA methyltransferase activity|0008173||IEA;go_process=RNA methylation|0001510||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019452222.1;locus_tag=IY40_RS14655;product=tRNA (uridine(34)/cytosine(34)/5-carboxymethylaminomethyluridine(34)-2'-O)-methyltransferase TrmL;protein_id=WP_043141004.1;transl_table=11 NZ_JPQY01000023.1 RefSeq gene 50239 51012 . + . ID=gene-IY40_RS14660;Name=IY40_RS14660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS14660;old_locus_tag=IY40_14915 NZ_JPQY01000023.1 Protein Homology CDS 50239 51012 . + 0 ID=cds-WP_043141008.1;Parent=gene-IY40_RS14660;Dbxref=GenBank:WP_043141008.1;Name=WP_043141008.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004931132.1;locus_tag=IY40_RS14660;product=CHAD domain-containing protein;protein_id=WP_043141008.1;transl_table=11 NZ_JPQY01000023.1 RefSeq gene 51117 51788 . + . ID=gene-IY40_RS14665;Name=IY40_RS14665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS14665;old_locus_tag=IY40_14920 NZ_JPQY01000023.1 Protein Homology CDS 51117 51788 . + 0 ID=cds-WP_025304675.1;Parent=gene-IY40_RS14665;Dbxref=GenBank:WP_025304675.1;Name=WP_025304675.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004953244.1;locus_tag=IY40_RS14665;product=DUF3313 domain-containing protein;protein_id=WP_025304675.1;transl_table=11 NZ_JPQY01000023.1 RefSeq gene 51850 52671 . - . ID=gene-IY40_RS14670;Name=cysE;gbkey=Gene;gene=cysE;gene_biotype=protein_coding;locus_tag=IY40_RS14670;old_locus_tag=IY40_14925 NZ_JPQY01000023.1 Protein Homology CDS 51850 52671 . - 0 ID=cds-WP_025304676.1;Parent=gene-IY40_RS14670;Dbxref=GenBank:WP_025304676.1;Name=WP_025304676.1;Ontology_term=GO:0006535,GO:0009001;gbkey=CDS;gene=cysE;go_function=serine O-acetyltransferase activity|0009001||IEA;go_process=cysteine biosynthetic process from serine|0006535||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312512.1;locus_tag=IY40_RS14670;product=serine O-acetyltransferase;protein_id=WP_025304676.1;transl_table=11 NZ_JPQY01000023.1 RefSeq gene 52778 53797 . - . ID=gene-IY40_RS14675;Name=gpsA;gbkey=Gene;gene=gpsA;gene_biotype=protein_coding;locus_tag=IY40_RS14675;old_locus_tag=IY40_14930 NZ_JPQY01000023.1 Protein Homology CDS 52778 53797 . - 0 ID=cds-WP_025304677.1;Parent=gene-IY40_RS14675;Dbxref=GenBank:WP_025304677.1;Name=WP_025304677.1;Ontology_term=GO:0006072,GO:0047952;gbkey=CDS;gene=gpsA;go_function=glycerol-3-phosphate dehydrogenase [NAD(P)+] activity|0047952||IEA;go_process=glycerol-3-phosphate metabolic process|0006072||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004956635.1;locus_tag=IY40_RS14675;product=NAD(P)H-dependent glycerol-3-phosphate dehydrogenase;protein_id=WP_025304677.1;transl_table=11 NZ_JPQY01000023.1 RefSeq gene 53797 54267 . - . ID=gene-IY40_RS14680;Name=secB;gbkey=Gene;gene=secB;gene_biotype=protein_coding;locus_tag=IY40_RS14680;old_locus_tag=IY40_14935 NZ_JPQY01000023.1 Protein Homology CDS 53797 54267 . - 0 ID=cds-WP_025304678.1;Parent=gene-IY40_RS14680;Dbxref=GenBank:WP_025304678.1;Name=WP_025304678.1;gbkey=CDS;gene=secB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014913761.1;locus_tag=IY40_RS14680;product=protein-export chaperone SecB;protein_id=WP_025304678.1;transl_table=11 NZ_JPQY01000023.1 RefSeq gene 54325 54573 . - . ID=gene-IY40_RS14685;Name=grxC;gbkey=Gene;gene=grxC;gene_biotype=protein_coding;locus_tag=IY40_RS14685;old_locus_tag=IY40_14940 NZ_JPQY01000023.1 Protein Homology CDS 54325 54573 . - 0 ID=cds-WP_019452217.1;Parent=gene-IY40_RS14685;Dbxref=GenBank:WP_019452217.1;Name=WP_019452217.1;gbkey=CDS;gene=grxC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016266853.1;locus_tag=IY40_RS14685;product=glutaredoxin 3;protein_id=WP_019452217.1;transl_table=11 NZ_JPQY01000023.1 RefSeq gene 54602 55036 . - . ID=gene-IY40_RS14690;Name=IY40_RS14690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS14690;old_locus_tag=IY40_14945 NZ_JPQY01000023.1 Protein Homology CDS 54602 55036 . - 0 ID=cds-WP_016929700.1;Parent=gene-IY40_RS14690;Dbxref=GenBank:WP_016929700.1;Name=WP_016929700.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005273648.1;locus_tag=IY40_RS14690;product=rhodanese-like domain-containing protein;protein_id=WP_016929700.1;transl_table=11 NZ_JPQY01000023.1 RefSeq gene 55334 56878 . + . ID=gene-IY40_RS14695;Name=gpmM;gbkey=Gene;gene=gpmM;gene_biotype=protein_coding;gene_synonym=pgmI;locus_tag=IY40_RS14695;old_locus_tag=IY40_14950 NZ_JPQY01000023.1 Protein Homology CDS 55334 56878 . + 0 ID=cds-WP_043141013.1;Parent=gene-IY40_RS14695;Dbxref=GenBank:WP_043141013.1;Name=WP_043141013.1;Ontology_term=GO:0006007,GO:0004619;gbkey=CDS;gene=gpmM;go_function=phosphoglycerate mutase activity|0004619||IEA;go_process=glucose catabolic process|0006007||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229416.1;locus_tag=IY40_RS14695;product=2%2C3-bisphosphoglycerate-independent phosphoglycerate mutase;protein_id=WP_043141013.1;transl_table=11 NZ_JPQY01000023.1 RefSeq gene 56888 58222 . + . ID=gene-IY40_RS14700;Name=envC;gbkey=Gene;gene=envC;gene_biotype=protein_coding;locus_tag=IY40_RS14700;old_locus_tag=IY40_14955 NZ_JPQY01000023.1 Protein Homology CDS 56888 58222 . + 0 ID=cds-WP_025304680.1;Parent=gene-IY40_RS14700;Dbxref=GenBank:WP_025304680.1;Name=WP_025304680.1;gbkey=CDS;gene=envC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015962344.1;locus_tag=IY40_RS14700;product=murein hydrolase activator EnvC;protein_id=WP_025304680.1;transl_table=11 NZ_JPQY01000023.1 RefSeq gene 58225 59178 . + . ID=gene-IY40_RS14705;Name=IY40_RS14705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS14705;old_locus_tag=IY40_14960 NZ_JPQY01000023.1 Protein Homology CDS 58225 59178 . + 0 ID=cds-WP_043141017.1;Parent=gene-IY40_RS14705;Dbxref=GenBank:WP_043141017.1;Name=WP_043141017.1;Ontology_term=GO:0005975,GO:0016810;gbkey=CDS;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019452214.1;locus_tag=IY40_RS14705;product=divergent polysaccharide deacetylase family protein;protein_id=WP_043141017.1;transl_table=11 NZ_JPQY01000023.1 RefSeq gene 59219 60244 . - . ID=gene-IY40_RS14710;Name=tdh;gbkey=Gene;gene=tdh;gene_biotype=protein_coding;locus_tag=IY40_RS14710;old_locus_tag=IY40_14965 NZ_JPQY01000023.1 Protein Homology CDS 59219 60244 . - 0 ID=cds-WP_025304682.1;Parent=gene-IY40_RS14710;Dbxref=GenBank:WP_025304682.1;Name=WP_025304682.1;Ontology_term=GO:0006567,GO:0008743;gbkey=CDS;gene=tdh;go_function=L-threonine 3-dehydrogenase activity|0008743||IEA;go_process=L-threonine catabolic process|0006567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120462.1;locus_tag=IY40_RS14710;product=L-threonine 3-dehydrogenase;protein_id=WP_025304682.1;transl_table=11 NZ_JPQY01000023.1 RefSeq gene 60254 61450 . - . ID=gene-IY40_RS14715;Name=kbl;gbkey=Gene;gene=kbl;gene_biotype=protein_coding;locus_tag=IY40_RS14715;old_locus_tag=IY40_14970 NZ_JPQY01000023.1 Protein Homology CDS 60254 61450 . - 0 ID=cds-WP_004931154.1;Parent=gene-IY40_RS14715;Dbxref=GenBank:WP_004931154.1;Name=WP_004931154.1;Ontology_term=GO:0006567,GO:0008890;gbkey=CDS;gene=kbl;go_function=glycine C-acetyltransferase activity|0008890||IEA;go_process=L-threonine catabolic process|0006567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019452213.1;locus_tag=IY40_RS14715;product=glycine C-acetyltransferase;protein_id=WP_004931154.1;transl_table=11 NZ_JPQY01000023.1 RefSeq gene 61690 62619 . + . ID=gene-IY40_RS14720;Name=rfaD;gbkey=Gene;gene=rfaD;gene_biotype=protein_coding;locus_tag=IY40_RS14720;old_locus_tag=IY40_14975 NZ_JPQY01000023.1 Protein Homology CDS 61690 62619 . + 0 ID=cds-WP_025304683.1;Parent=gene-IY40_RS14720;Dbxref=GenBank:WP_025304683.1;Name=WP_025304683.1;Ontology_term=GO:0005975,GO:0008712;gbkey=CDS;gene=rfaD;go_function=ADP-glyceromanno-heptose 6-epimerase activity|0008712||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012147498.1;locus_tag=IY40_RS14720;product=ADP-glyceromanno-heptose 6-epimerase;protein_id=WP_025304683.1;transl_table=11 NZ_JPQY01000023.1 RefSeq gene 62642 63688 . + . ID=gene-IY40_RS14725;Name=rfaF;gbkey=Gene;gene=rfaF;gene_biotype=protein_coding;locus_tag=IY40_RS14725;old_locus_tag=IY40_14980 NZ_JPQY01000023.1 Protein Homology CDS 62642 63688 . + 0 ID=cds-WP_025304684.1;Parent=gene-IY40_RS14725;Dbxref=GenBank:WP_025304684.1;Name=WP_025304684.1;Ontology_term=GO:0009103,GO:0016757;gbkey=CDS;gene=rfaF;go_function=glycosyltransferase activity|0016757||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015379429.1;locus_tag=IY40_RS14725;product=ADP-heptose--LPS heptosyltransferase RfaF;protein_id=WP_025304684.1;transl_table=11 NZ_JPQY01000023.1 RefSeq gene 63691 64656 . + . ID=gene-IY40_RS14730;Name=rfaC;gbkey=Gene;gene=rfaC;gene_biotype=protein_coding;locus_tag=IY40_RS14730;old_locus_tag=IY40_14985 NZ_JPQY01000023.1 Protein Homology CDS 63691 64656 . + 0 ID=cds-WP_025304685.1;Parent=gene-IY40_RS14730;Dbxref=GenBank:WP_025304685.1;Name=WP_025304685.1;Ontology_term=GO:0009244,GO:0008920;gbkey=CDS;gene=rfaC;go_function=lipopolysaccharide heptosyltransferase activity|0008920||IEA;go_process=lipopolysaccharide core region biosynthetic process|0009244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208985.1;locus_tag=IY40_RS14730;product=lipopolysaccharide heptosyltransferase RfaC;protein_id=WP_025304685.1;transl_table=11 NZ_JPQY01000023.1 RefSeq gene 64653 65819 . + . ID=gene-IY40_RS14735;Name=IY40_RS14735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS14735;old_locus_tag=IY40_14990 NZ_JPQY01000023.1 Protein Homology CDS 64653 65819 . + 0 ID=cds-WP_043141021.1;Parent=gene-IY40_RS14735;Dbxref=GenBank:WP_043141021.1;Name=WP_043141021.1;Ontology_term=GO:0009101,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=glycoprotein biosynthetic process|0009101||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014594898.1;locus_tag=IY40_RS14735;product=glycosyltransferase family 4 protein;protein_id=WP_043141021.1;transl_table=11 NZ_JPQY01000023.1 RefSeq gene 65848 67089 . + . ID=gene-IY40_RS14740;Name=IY40_RS14740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS14740;old_locus_tag=IY40_14995 NZ_JPQY01000023.1 Protein Homology CDS 65848 67089 . + 0 ID=cds-WP_043141024.1;Parent=gene-IY40_RS14740;Dbxref=GenBank:WP_043141024.1;Name=WP_043141024.1;Ontology_term=GO:0009103,GO:0008754,GO:0008755,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=O-antigen ligase activity|0008754||IEA,O antigen polymerase activity|0008755||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004931164.1;locus_tag=IY40_RS14740;product=O-antigen ligase family protein;protein_id=WP_043141024.1;transl_table=11 NZ_JPQY01000023.1 RefSeq gene 67086 68063 . + . ID=gene-IY40_RS14745;Name=IY40_RS14745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS14745;old_locus_tag=IY40_15000 NZ_JPQY01000023.1 Protein Homology CDS 67086 68063 . + 0 ID=cds-WP_043141028.1;Parent=gene-IY40_RS14745;Dbxref=GenBank:WP_043141028.1;Name=WP_043141028.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015379432.1;locus_tag=IY40_RS14745;product=glycosyltransferase;protein_id=WP_043141028.1;transl_table=11 NZ_JPQY01000023.1 RefSeq gene 68100 69194 . - . ID=gene-IY40_RS14750;Name=IY40_RS14750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS14750;old_locus_tag=IY40_15005 NZ_JPQY01000023.1 Protein Homology CDS 68100 69194 . - 0 ID=cds-WP_025304689.1;Parent=gene-IY40_RS14750;Dbxref=GenBank:WP_025304689.1;Name=WP_025304689.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004931167.1;locus_tag=IY40_RS14750;product=glycosyltransferase family 9 protein;protein_id=WP_025304689.1;transl_table=11 NZ_JPQY01000023.1 RefSeq gene 69203 70159 . - . ID=gene-IY40_RS14755;Name=IY40_RS14755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS14755;old_locus_tag=IY40_15010 NZ_JPQY01000023.1 Protein Homology CDS 69203 70159 . - 0 ID=cds-WP_025304690.1;Parent=gene-IY40_RS14755;Dbxref=GenBank:WP_025304690.1;Name=WP_025304690.1;Ontology_term=GO:0005975,GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006320113.1;locus_tag=IY40_RS14755;product=polysaccharide deacetylase family protein;protein_id=WP_025304690.1;transl_table=11 NZ_JPQY01000023.1 RefSeq gene 70370 71452 . + . ID=gene-IY40_RS14760;Name=rfaQ;gbkey=Gene;gene=rfaQ;gene_biotype=protein_coding;locus_tag=IY40_RS14760;old_locus_tag=IY40_15015 NZ_JPQY01000023.1 Protein Homology CDS 70370 71452 . + 0 ID=cds-WP_043141032.1;Parent=gene-IY40_RS14760;Dbxref=GenBank:WP_043141032.1;Name=WP_043141032.1;Ontology_term=GO:0016757;gbkey=CDS;gene=rfaQ;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004953303.1;locus_tag=IY40_RS14760;product=putative lipopolysaccharide heptosyltransferase III;protein_id=WP_043141032.1;transl_table=11 NZ_JPQY01000023.1 RefSeq gene 71449 72576 . + . ID=gene-IY40_RS14765;Name=IY40_RS14765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS14765;old_locus_tag=IY40_15020 NZ_JPQY01000023.1 Protein Homology CDS 71449 72576 . + 0 ID=cds-WP_043141035.1;Parent=gene-IY40_RS14765;Dbxref=GenBank:WP_043141035.1;Name=WP_043141035.1;Ontology_term=GO:0009101,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=glycoprotein biosynthetic process|0009101||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004956702.1;locus_tag=IY40_RS14765;product=glycosyltransferase family 4 protein;protein_id=WP_043141035.1;transl_table=11 NZ_JPQY01000023.1 RefSeq gene 72579 73679 . + . ID=gene-IY40_RS14770;Name=IY40_RS14770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS14770;old_locus_tag=IY40_15025 NZ_JPQY01000023.1 Protein Homology CDS 72579 73679 . + 0 ID=cds-WP_043141038.1;Parent=gene-IY40_RS14770;Dbxref=GenBank:WP_043141038.1;Name=WP_043141038.1;Ontology_term=GO:0009101,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=glycoprotein biosynthetic process|0009101||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016929687.1;locus_tag=IY40_RS14770;product=glycosyltransferase;protein_id=WP_043141038.1;transl_table=11 NZ_JPQY01000023.1 RefSeq gene 73724 74737 . - . ID=gene-IY40_RS14775;Name=IY40_RS14775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS14775;old_locus_tag=IY40_15030 NZ_JPQY01000023.1 Protein Homology CDS 73724 74737 . - 0 ID=cds-WP_043141040.1;Parent=gene-IY40_RS14775;Dbxref=GenBank:WP_043141040.1;Name=WP_043141040.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015379435.1;locus_tag=IY40_RS14775;product=glycosyltransferase family 9 protein;protein_id=WP_043141040.1;transl_table=11 NZ_JPQY01000023.1 RefSeq gene 74863 76140 . + . ID=gene-IY40_RS14780;Name=waaA;gbkey=Gene;gene=waaA;gene_biotype=protein_coding;locus_tag=IY40_RS14780;old_locus_tag=IY40_15035 NZ_JPQY01000023.1 Protein Homology CDS 74863 76140 . + 0 ID=cds-WP_025304695.1;Parent=gene-IY40_RS14780;Dbxref=GenBank:WP_025304695.1;Name=WP_025304695.1;Ontology_term=GO:0016740;gbkey=CDS;gene=waaA;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013648993.1;locus_tag=IY40_RS14780;product=lipid IV(A) 3-deoxy-D-manno-octulosonic acid transferase;protein_id=WP_025304695.1;transl_table=11 NZ_JPQY01000023.1 RefSeq gene 76141 76914 . + . ID=gene-IY40_RS14785;Name=IY40_RS14785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS14785;old_locus_tag=IY40_15040 NZ_JPQY01000023.1 Protein Homology CDS 76141 76914 . + 0 ID=cds-WP_025304696.1;Parent=gene-IY40_RS14785;Dbxref=GenBank:WP_025304696.1;Name=WP_025304696.1;Ontology_term=GO:0009101,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=glycoprotein biosynthetic process|0009101||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019452199.1;locus_tag=IY40_RS14785;product=glycosyltransferase family 2 protein;protein_id=WP_025304696.1;transl_table=11 NZ_JPQY01000023.1 RefSeq gene 76918 77403 . + . ID=gene-IY40_RS14790;Name=coaD;gbkey=Gene;gene=coaD;gene_biotype=protein_coding;locus_tag=IY40_RS14790;old_locus_tag=IY40_15045 NZ_JPQY01000023.1 Protein Homology CDS 76918 77403 . + 0 ID=cds-WP_004931181.1;Parent=gene-IY40_RS14790;Dbxref=GenBank:WP_004931181.1;Name=WP_004931181.1;Ontology_term=GO:0015937,GO:0004595;gbkey=CDS;gene=coaD;go_function=pantetheine-phosphate adenylyltransferase activity|0004595||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012147511.1;locus_tag=IY40_RS14790;product=pantetheine-phosphate adenylyltransferase;protein_id=WP_004931181.1;transl_table=11 NZ_JPQY01000023.1 RefSeq gene 77407 78222 . - . ID=gene-IY40_RS14795;Name=mutM;gbkey=Gene;gene=mutM;gene_biotype=protein_coding;locus_tag=IY40_RS14795;old_locus_tag=IY40_15050 NZ_JPQY01000023.1 Protein Homology CDS 77407 78222 . - 0 ID=cds-WP_025304697.1;Parent=gene-IY40_RS14795;Dbxref=GenBank:WP_025304697.1;Name=WP_025304697.1;Ontology_term=GO:0006281,GO:0006284,GO:0003676,GO:0003684,GO:0003906,GO:0008270,GO:0008534,GO:0016799,GO:0019104;gbkey=CDS;gene=mutM;go_function=nucleic acid binding|0003676||IEA,damaged DNA binding|0003684||IEA,DNA-(apurinic or apyrimidinic site) endonuclease activity|0003906||IEA,zinc ion binding|0008270||IEA,oxidized purine nucleobase lesion DNA N-glycosylase activity|0008534||IEA,hydrolase activity%2C hydrolyzing N-glycosyl compounds|0016799||IEA,DNA N-glycosylase activity|0019104||IEA;go_process=DNA repair|0006281||IEA,base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004953327.1;locus_tag=IY40_RS14795;product=bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase;protein_id=WP_025304697.1;transl_table=11 NZ_JPQY01000023.1 RefSeq gene 78304 78471 . - . ID=gene-IY40_RS14800;Name=rpmG;gbkey=Gene;gene=rpmG;gene_biotype=protein_coding;locus_tag=IY40_RS14800;old_locus_tag=IY40_15055 NZ_JPQY01000023.1 Protein Homology CDS 78304 78471 . - 0 ID=cds-WP_002442576.1;Parent=gene-IY40_RS14800;Dbxref=GenBank:WP_002442576.1;Name=WP_002442576.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmG;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010847629.1;locus_tag=IY40_RS14800;product=50S ribosomal protein L33;protein_id=WP_002442576.1;transl_table=11 NZ_JPQY01000023.1 RefSeq gene 78483 78719 . - . ID=gene-IY40_RS25340;Name=rpmB;gbkey=Gene;gene=rpmB;gene_biotype=protein_coding;locus_tag=IY40_RS25340 NZ_JPQY01000023.1 Protein Homology CDS 78483 78719 . - 0 ID=cds-WP_004931195.1;Parent=gene-IY40_RS25340;Dbxref=GenBank:WP_004931195.1;Name=WP_004931195.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmB;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008457442.1;locus_tag=IY40_RS25340;product=50S ribosomal protein L28;protein_id=WP_004931195.1;transl_table=11 NZ_JPQY01000023.1 RefSeq gene 78982 79665 . - . ID=gene-IY40_RS14805;Name=radC;gbkey=Gene;gene=radC;gene_biotype=protein_coding;locus_tag=IY40_RS14805;old_locus_tag=IY40_15060 NZ_JPQY01000023.1 Protein Homology CDS 78982 79665 . - 0 ID=cds-WP_025304698.1;Parent=gene-IY40_RS14805;Dbxref=GenBank:WP_025304698.1;Name=WP_025304698.1;gbkey=CDS;gene=radC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004931197.1;locus_tag=IY40_RS14805;product=RadC family protein;protein_id=WP_025304698.1;transl_table=11 NZ_JPQY01000023.1 RefSeq gene 79849 81066 . + . ID=gene-IY40_RS14810;Name=coaBC;gbkey=Gene;gene=coaBC;gene_biotype=protein_coding;locus_tag=IY40_RS14810;old_locus_tag=IY40_15065 NZ_JPQY01000023.1 Protein Homology CDS 79849 81066 . + 0 ID=cds-WP_043141094.1;Parent=gene-IY40_RS14810;Dbxref=GenBank:WP_043141094.1;Name=WP_043141094.1;Ontology_term=GO:0015937,GO:0015941,GO:0004632,GO:0004633,GO:0010181;gbkey=CDS;gene=coaBC;go_function=phosphopantothenate--cysteine ligase activity|0004632||IEA,phosphopantothenoylcysteine decarboxylase activity|0004633||IEA,FMN binding|0010181||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA,pantothenate catabolic process|0015941||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012147514.1;locus_tag=IY40_RS14810;product=bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC;protein_id=WP_043141094.1;transl_table=11 NZ_JPQY01000023.1 RefSeq gene 81044 81502 . + . ID=gene-IY40_RS14815;Name=dut;gbkey=Gene;gene=dut;gene_biotype=protein_coding;locus_tag=IY40_RS14815;old_locus_tag=IY40_15070 NZ_JPQY01000023.1 Protein Homology CDS 81044 81502 . + 0 ID=cds-WP_016929680.1;Parent=gene-IY40_RS14815;Dbxref=GenBank:WP_016929680.1;Name=WP_016929680.1;Ontology_term=GO:0006226,GO:0046081,GO:0000287,GO:0004170;gbkey=CDS;gene=dut;go_function=magnesium ion binding|0000287||IEA,dUTP diphosphatase activity|0004170||IEA;go_process=dUMP biosynthetic process|0006226||IEA,dUTP catabolic process|0046081||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012147515.1;locus_tag=IY40_RS14815;product=dUTP diphosphatase;protein_id=WP_016929680.1;transl_table=11 NZ_JPQY01000023.1 RefSeq gene 81754 82350 . + . ID=gene-IY40_RS14820;Name=slmA;gbkey=Gene;gene=slmA;gene_biotype=protein_coding;locus_tag=IY40_RS14820;old_locus_tag=IY40_15075 NZ_JPQY01000023.1 Protein Homology CDS 81754 82350 . + 0 ID=cds-WP_025304700.1;Parent=gene-IY40_RS14820;Dbxref=GenBank:WP_025304700.1;Name=WP_025304700.1;Ontology_term=GO:0010974,GO:0003677;gbkey=CDS;gene=slmA;go_function=DNA binding|0003677||IEA;go_process=negative regulation of division septum assembly|0010974||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015848259.1;locus_tag=IY40_RS14820;product=nucleoid occlusion factor SlmA;protein_id=WP_025304700.1;transl_table=11 NZ_JPQY01000023.1 RefSeq gene 82382 83023 . - . ID=gene-IY40_RS14825;Name=pyrE;gbkey=Gene;gene=pyrE;gene_biotype=protein_coding;locus_tag=IY40_RS14825;old_locus_tag=IY40_15080 NZ_JPQY01000023.1 Protein Homology CDS 82382 83023 . - 0 ID=cds-WP_004931204.1;Parent=gene-IY40_RS14825;Dbxref=GenBank:WP_004931204.1;Name=WP_004931204.1;Ontology_term=GO:0009220,GO:0004588;gbkey=CDS;gene=pyrE;go_function=orotate phosphoribosyltransferase activity|0004588||IEA;go_process=pyrimidine ribonucleotide biosynthetic process|0009220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462633.1;locus_tag=IY40_RS14825;product=orotate phosphoribosyltransferase;protein_id=WP_004931204.1;transl_table=11 NZ_JPQY01000023.1 RefSeq gene 83120 83836 . - . ID=gene-IY40_RS14830;Name=rph;gbkey=Gene;gene=rph;gene_biotype=protein_coding;locus_tag=IY40_RS14830;old_locus_tag=IY40_15085 NZ_JPQY01000023.1 Protein Homology CDS 83120 83836 . - 0 ID=cds-WP_025160305.1;Parent=gene-IY40_RS14830;Dbxref=GenBank:WP_025160305.1;Name=WP_025160305.1;Ontology_term=GO:0008033,GO:0000049,GO:0009022;gbkey=CDS;gene=rph;go_function=tRNA binding|0000049||IEA,tRNA nucleotidyltransferase activity|0009022||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013577632.1;locus_tag=IY40_RS14830;product=ribonuclease PH;protein_id=WP_025160305.1;transl_table=11 NZ_JPQY01000023.1 RefSeq gene 83963 84826 . + . ID=gene-IY40_RS14835;Name=IY40_RS14835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS14835;old_locus_tag=IY40_15090 NZ_JPQY01000023.1 Protein Homology CDS 83963 84826 . + 0 ID=cds-WP_025304701.1;Parent=gene-IY40_RS14835;Dbxref=GenBank:WP_025304701.1;Name=WP_025304701.1;Ontology_term=GO:0016788;gbkey=CDS;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122606.1;locus_tag=IY40_RS14835;product=YicC/YloC family endoribonuclease;protein_id=WP_025304701.1;transl_table=11 NZ_JPQY01000023.1 RefSeq gene 84882 85271 . - . ID=gene-IY40_RS14840;Name=IY40_RS14840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS14840;old_locus_tag=IY40_15095 NZ_JPQY01000023.1 Protein Homology CDS 84882 85271 . - 0 ID=cds-WP_043141047.1;Parent=gene-IY40_RS14840;Dbxref=GenBank:WP_043141047.1;Name=WP_043141047.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004931209.1;locus_tag=IY40_RS14840;product=hypothetical protein;protein_id=WP_043141047.1;transl_table=11 NZ_JPQY01000023.1 RefSeq gene 85633 86817 . + . ID=gene-IY40_RS14845;Name=IY40_RS14845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS14845;old_locus_tag=IY40_15100 NZ_JPQY01000023.1 Protein Homology CDS 85633 86817 . + 0 ID=cds-WP_004931212.1;Parent=gene-IY40_RS14845;Dbxref=GenBank:WP_004931212.1;Name=WP_004931212.1;Ontology_term=GO:1901642,GO:0005337,GO:0015293,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=nucleoside transmembrane transporter activity|0005337||IEA,symporter activity|0015293||IEA;go_process=nucleoside transmembrane transport|1901642||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004931212.1;locus_tag=IY40_RS14845;product=NupC/NupG family nucleoside CNT transporter;protein_id=WP_004931212.1;transl_table=11 NZ_JPQY01000023.1 RefSeq gene 86852 87286 . - . ID=gene-IY40_RS14850;Name=IY40_RS14850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS14850;old_locus_tag=IY40_15105 NZ_JPQY01000023.1 Protein Homology CDS 86852 87286 . - 0 ID=cds-WP_025304703.1;Parent=gene-IY40_RS14850;Dbxref=GenBank:WP_025304703.1;Name=WP_025304703.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015379443.1;locus_tag=IY40_RS14850;product=DUF3574 domain-containing protein;protein_id=WP_025304703.1;transl_table=11 NZ_JPQY01000023.1 RefSeq gene 87540 88157 . + . ID=gene-IY40_RS14855;Name=IY40_RS14855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS14855;old_locus_tag=IY40_15110 NZ_JPQY01000023.1 Protein Homology CDS 87540 88157 . + 0 ID=cds-WP_025304704.1;Parent=gene-IY40_RS14855;Dbxref=GenBank:WP_025304704.1;Name=WP_025304704.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005165881.1;locus_tag=IY40_RS14855;product=trimeric intracellular cation channel family protein;protein_id=WP_025304704.1;transl_table=11 NZ_JPQY01000023.1 RefSeq gene 88369 88992 . + . ID=gene-IY40_RS14860;Name=gmk;gbkey=Gene;gene=gmk;gene_biotype=protein_coding;locus_tag=IY40_RS14860;old_locus_tag=IY40_15115 NZ_JPQY01000023.1 Protein Homology CDS 88369 88992 . + 0 ID=cds-WP_033636481.1;Parent=gene-IY40_RS14860;Dbxref=GenBank:WP_033636481.1;Name=WP_033636481.1;Ontology_term=GO:0006163,GO:0004385;gbkey=CDS;gene=gmk;go_function=GMP kinase activity|0004385||IEA;go_process=purine nucleotide metabolic process|0006163||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000046969.1;locus_tag=IY40_RS14860;product=guanylate kinase;protein_id=WP_033636481.1;transl_table=11 NZ_JPQY01000023.1 RefSeq gene 89047 89322 . + . ID=gene-IY40_RS14865;Name=rpoZ;gbkey=Gene;gene=rpoZ;gene_biotype=protein_coding;locus_tag=IY40_RS14865;old_locus_tag=IY40_15120 NZ_JPQY01000023.1 Protein Homology CDS 89047 89322 . + 0 ID=cds-WP_004931221.1;Parent=gene-IY40_RS14865;Dbxref=GenBank:WP_004931221.1;Name=WP_004931221.1;Ontology_term=GO:0006351,GO:0003899;gbkey=CDS;gene=rpoZ;go_function=DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013511051.1;locus_tag=IY40_RS14865;product=DNA-directed RNA polymerase subunit omega;protein_id=WP_004931221.1;transl_table=11 NZ_JPQY01000023.1 RefSeq gene 89341 91452 . + . ID=gene-IY40_RS14870;Name=spoT;gbkey=Gene;gene=spoT;gene_biotype=protein_coding;locus_tag=IY40_RS14870;old_locus_tag=IY40_15125 NZ_JPQY01000023.1 Protein Homology CDS 89341 91452 . + 0 ID=cds-WP_015379445.1;Parent=gene-IY40_RS14870;Dbxref=GenBank:WP_015379445.1;Name=WP_015379445.1;Ontology_term=GO:0015969,GO:0008728,GO:0008893;gbkey=CDS;gene=spoT;go_function=GTP diphosphokinase activity|0008728||IEA,guanosine-3'%2C5'-bis(diphosphate) 3'-diphosphatase activity|0008893||IEA;go_process=guanosine tetraphosphate metabolic process|0015969||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312552.1;locus_tag=IY40_RS14870;product=bifunctional GTP diphosphokinase/guanosine-3'%2C5'-bis pyrophosphate 3'-pyrophosphohydrolase;protein_id=WP_015379445.1;transl_table=11 NZ_JPQY01000023.1 RefSeq gene 91458 92153 . + . ID=gene-IY40_RS14875;Name=trmH;gbkey=Gene;gene=trmH;gene_biotype=protein_coding;locus_tag=IY40_RS14875;old_locus_tag=IY40_15130 NZ_JPQY01000023.1 Protein Homology CDS 91458 92153 . + 0 ID=cds-WP_033639122.1;Parent=gene-IY40_RS14875;Dbxref=GenBank:WP_033639122.1;Name=WP_033639122.1;Ontology_term=GO:0030488,GO:0141100;gbkey=CDS;gene=trmH;go_function=tRNA (guanine(18)-2'-O)-methyltransferase activity|0141100||IEA;go_process=tRNA methylation|0030488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004953390.1;locus_tag=IY40_RS14875;product=tRNA (guanosine(18)-2'-O)-methyltransferase TrmH;protein_id=WP_033639122.1;transl_table=11 NZ_JPQY01000023.1 RefSeq gene 92150 94231 . + . ID=gene-IY40_RS14880;Name=recG;gbkey=Gene;gene=recG;gene_biotype=protein_coding;locus_tag=IY40_RS14880;old_locus_tag=IY40_15135 NZ_JPQY01000023.1 Protein Homology CDS 92150 94231 . + 0 ID=cds-WP_043141057.1;Parent=gene-IY40_RS14880;Dbxref=GenBank:WP_043141057.1;Name=WP_043141057.1;Ontology_term=GO:0006281,GO:0006310,GO:0003676,GO:0003678,GO:0005524;gbkey=CDS;gene=recG;go_function=nucleic acid binding|0003676||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462644.1;locus_tag=IY40_RS14880;product=ATP-dependent DNA helicase RecG;protein_id=WP_043141057.1;transl_table=11 NZ_JPQY01000023.1 RefSeq gene 94274 95485 . - . ID=gene-IY40_RS14885;Name=gltS;gbkey=Gene;gene=gltS;gene_biotype=protein_coding;locus_tag=IY40_RS14885;old_locus_tag=IY40_15140 NZ_JPQY01000023.1 Protein Homology CDS 94274 95485 . - 0 ID=cds-WP_043141059.1;Parent=gene-IY40_RS14885;Dbxref=GenBank:WP_043141059.1;Name=WP_043141059.1;Ontology_term=GO:0015813,GO:0015501,GO:0016020;gbkey=CDS;gene=gltS;go_component=membrane|0016020||IEA;go_function=glutamate:sodium symporter activity|0015501||IEA;go_process=L-glutamate transmembrane transport|0015813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019452187.1;locus_tag=IY40_RS14885;product=sodium/glutamate symporter;protein_id=WP_043141059.1;transl_table=11 NZ_JPQY01000023.1 RefSeq gene 95726 97126 . + . ID=gene-IY40_RS14890;Name=IY40_RS14890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS14890;old_locus_tag=IY40_15145 NZ_JPQY01000023.1 Protein Homology CDS 95726 97126 . + 0 ID=cds-WP_043141063.1;Parent=gene-IY40_RS14890;Dbxref=GenBank:WP_043141063.1;Name=WP_043141063.1;Ontology_term=GO:0015851,GO:0015205,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=nucleobase transmembrane transporter activity|0015205||IEA;go_process=nucleobase transport|0015851||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016929647.1;locus_tag=IY40_RS14890;product=nucleobase:cation symporter-2 family protein;protein_id=WP_043141063.1;transl_table=11 NZ_JPQY01000023.1 RefSeq gene 97255 98916 . + . ID=gene-IY40_RS14895;Name=IY40_RS14895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS14895;old_locus_tag=IY40_15150 NZ_JPQY01000023.1 Protein Homology CDS 97255 98916 . + 0 ID=cds-WP_043141072.1;Parent=gene-IY40_RS14895;Dbxref=GenBank:WP_043141072.1;Name=WP_043141072.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017894463.1;locus_tag=IY40_RS14895;product=AsmA family protein;protein_id=WP_043141072.1;transl_table=11 NZ_JPQY01000023.1 RefSeq gene 98955 99902 . - . ID=gene-IY40_RS14900;Name=fabY;gbkey=Gene;gene=fabY;gene_biotype=protein_coding;gene_synonym=yiiD;locus_tag=IY40_RS14900;old_locus_tag=IY40_15155 NZ_JPQY01000023.1 Protein Homology CDS 98955 99902 . - 0 ID=cds-WP_025304711.1;Parent=gene-IY40_RS14900;Dbxref=GenBank:WP_025304711.1;Name=WP_025304711.1;gbkey=CDS;gene=fabY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004931235.1;locus_tag=IY40_RS14900;product=fatty acid biosynthesis protein FabY;protein_id=WP_025304711.1;transl_table=11 NZ_JPQY01000023.1 RefSeq gene 99924 100361 . - . ID=gene-IY40_RS14905;Name=dtd;gbkey=Gene;gene=dtd;gene_biotype=protein_coding;locus_tag=IY40_RS14905;old_locus_tag=IY40_15160 NZ_JPQY01000023.1 Protein Homology CDS 99924 100361 . - 0 ID=cds-WP_025304712.1;Parent=gene-IY40_RS14905;Dbxref=GenBank:WP_025304712.1;Name=WP_025304712.1;Ontology_term=GO:0008152,GO:0004045;gbkey=CDS;gene=dtd;go_function=peptidyl-tRNA hydrolase activity|0004045||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012147545.1;locus_tag=IY40_RS14905;product=D-aminoacyl-tRNA deacylase;protein_id=WP_025304712.1;transl_table=11 NZ_JPQY01000023.1 RefSeq gene 100358 101251 . - . ID=gene-IY40_RS14910;Name=IY40_RS14910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS14910;old_locus_tag=IY40_15165 NZ_JPQY01000023.1 Protein Homology CDS 100358 101251 . - 0 ID=cds-WP_025304713.1;Parent=gene-IY40_RS14910;Dbxref=GenBank:WP_025304713.1;Name=WP_025304713.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019452182.1;locus_tag=IY40_RS14910;product=virulence factor BrkB family protein;protein_id=WP_025304713.1;transl_table=11 NZ_JPQY01000023.1 RefSeq gene 101303 101893 . - . ID=gene-IY40_RS14915;Name=yihX;gbkey=Gene;gene=yihX;gene_biotype=protein_coding;locus_tag=IY40_RS14915;old_locus_tag=IY40_15170 NZ_JPQY01000023.1 Protein Homology CDS 101303 101893 . - 0 ID=cds-WP_043141076.1;Parent=gene-IY40_RS14915;Dbxref=GenBank:WP_043141076.1;Name=WP_043141076.1;gbkey=CDS;gene=yihX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004931242.1;locus_tag=IY40_RS14915;product=glucose-1-phosphatase;protein_id=WP_043141076.1;transl_table=11 NZ_JPQY01000023.1 RefSeq gene 102059 103882 . - . ID=gene-IY40_RS14920;Name=typA;gbkey=Gene;gene=typA;gene_biotype=protein_coding;locus_tag=IY40_RS14920;old_locus_tag=IY40_15175 NZ_JPQY01000023.1 Protein Homology CDS 102059 103882 . - 0 ID=cds-WP_004931243.1;Parent=gene-IY40_RS14920;Dbxref=GenBank:WP_004931243.1;Name=WP_004931243.1;gbkey=CDS;gene=typA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815046.1;locus_tag=IY40_RS14920;product=ribosome-dependent GTPase TypA;protein_id=WP_004931243.1;transl_table=11 NZ_JPQY01000023.1 RefSeq gene 104253 105662 . + . ID=gene-IY40_RS14925;Name=glnA;gbkey=Gene;gene=glnA;gene_biotype=protein_coding;locus_tag=IY40_RS14925;old_locus_tag=IY40_15180 NZ_JPQY01000023.1 Protein Homology CDS 104253 105662 . + 0 ID=cds-WP_025304715.1;Parent=gene-IY40_RS14925;Dbxref=GenBank:WP_025304715.1;Name=WP_025304715.1;Ontology_term=GO:0006542,GO:0008152,GO:0004356;gbkey=CDS;gene=glnA;go_function=glutamine synthetase activity|0004356||IEA;go_process=glutamine biosynthetic process|0006542||IEA,metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224327.1;locus_tag=IY40_RS14925;product=glutamate--ammonia ligase;protein_id=WP_025304715.1;transl_table=11 NZ_JPQY01000023.1 RefSeq gene 105861 106910 . + . ID=gene-IY40_RS14930;Name=glnL;gbkey=Gene;gene=glnL;gene_biotype=protein_coding;locus_tag=IY40_RS14930;old_locus_tag=IY40_15185 NZ_JPQY01000023.1 Protein Homology CDS 105861 106910 . + 0 ID=cds-WP_004931246.1;Parent=gene-IY40_RS14930;Dbxref=GenBank:WP_004931246.1;Name=WP_004931246.1;Ontology_term=GO:0006355,GO:0007165,GO:0016310,GO:0000155;gbkey=CDS;gene=glnL;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224326.1;locus_tag=IY40_RS14930;product=nitrogen regulation protein NR(II);protein_id=WP_004931246.1;transl_table=11 NZ_JPQY01000023.1 RefSeq gene 106919 108331 . + . ID=gene-IY40_RS14935;Name=glnG;gbkey=Gene;gene=glnG;gene_biotype=protein_coding;locus_tag=IY40_RS14935;old_locus_tag=IY40_15190 NZ_JPQY01000023.1 Protein Homology CDS 106919 108331 . + 0 ID=cds-WP_025304716.1;Parent=gene-IY40_RS14935;Dbxref=GenBank:WP_025304716.1;Name=WP_025304716.1;Ontology_term=GO:0006355,GO:0043565;gbkey=CDS;gene=glnG;go_function=sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133942.1;locus_tag=IY40_RS14935;product=nitrogen regulation protein NR(I);protein_id=WP_025304716.1;transl_table=11 NZ_JPQY01000023.1 RefSeq gene 108445 108567 . + . ID=gene-IY40_RS26015;Name=IY40_RS26015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS26015 NZ_JPQY01000023.1 Protein Homology CDS 108445 108567 . + 0 ID=cds-WP_015379453.1;Parent=gene-IY40_RS26015;Dbxref=GenBank:WP_015379453.1;Name=WP_015379453.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015379453.1;locus_tag=IY40_RS26015;product=YshB family small membrane protein;protein_id=WP_015379453.1;transl_table=11 NZ_JPQY01000023.1 RefSeq gene 108602 109975 . - . ID=gene-IY40_RS14940;Name=hemN;gbkey=Gene;gene=hemN;gene_biotype=protein_coding;locus_tag=IY40_RS14940;old_locus_tag=IY40_15200 NZ_JPQY01000023.1 Protein Homology CDS 108602 109975 . - 0 ID=cds-WP_043141080.1;Parent=gene-IY40_RS14940;Dbxref=GenBank:WP_043141080.1;Name=WP_043141080.1;Ontology_term=GO:0006779,GO:0004109,GO:0005737;gbkey=CDS;gene=hemN;go_component=cytoplasm|0005737||IEA;go_function=coproporphyrinogen oxidase activity|0004109||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709665.2;locus_tag=IY40_RS14940;product=oxygen-independent coproporphyrinogen III oxidase;protein_id=WP_043141080.1;transl_table=11 NZ_JPQY01000023.1 RefSeq gene 110158 110697 . - . ID=gene-IY40_RS14945;Name=yihI;gbkey=Gene;gene=yihI;gene_biotype=protein_coding;locus_tag=IY40_RS14945;old_locus_tag=IY40_15205 NZ_JPQY01000023.1 Protein Homology CDS 110158 110697 . - 0 ID=cds-WP_072008264.1;Parent=gene-IY40_RS14945;Dbxref=GenBank:WP_072008264.1;Name=WP_072008264.1;gbkey=CDS;gene=yihI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005191191.1;locus_tag=IY40_RS14945;product=Der GTPase-activating protein YihI;protein_id=WP_072008264.1;transl_table=11 NZ_JPQY01000023.1 RefSeq gene 111432 112076 . + . ID=gene-IY40_RS14955;Name=yihA;gbkey=Gene;gene=yihA;gene_biotype=protein_coding;locus_tag=IY40_RS14955;old_locus_tag=IY40_15215 NZ_JPQY01000023.1 Protein Homology CDS 111432 112076 . + 0 ID=cds-WP_025304719.1;Parent=gene-IY40_RS14955;Dbxref=GenBank:WP_025304719.1;Name=WP_025304719.1;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0043022,GO:0005737;gbkey=CDS;gene=yihA;go_component=cytoplasm|0005737||IEA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,ribosome binding|0043022||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004931258.1;locus_tag=IY40_RS14955;product=ribosome biogenesis GTP-binding protein YihA/YsxC;protein_id=WP_025304719.1;transl_table=11 NZ_JPQY01000023.1 RefSeq gene 112355 112402 . - . ID=gene-IY40_RS26705;Name=IY40_RS26705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS26705 NZ_JPQY01000023.1 Protein Homology CDS 112355 112402 . - 0 ID=cds-WP_071892919.1;Parent=gene-IY40_RS26705;Dbxref=GenBank:WP_071892919.1;Name=WP_071892919.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_013606034.1;locus_tag=IY40_RS26705;product=spot 42 RNA%2C inhibition of DNA synthesis;protein_id=WP_071892919.1;transl_table=11 NZ_JPQY01000023.1 RefSeq gene 112594 115392 . - . ID=gene-IY40_RS14960;Name=polA;gbkey=Gene;gene=polA;gene_biotype=protein_coding;locus_tag=IY40_RS14960;old_locus_tag=IY40_15220 NZ_JPQY01000023.1 Protein Homology CDS 112594 115392 . - 0 ID=cds-WP_038630023.1;Parent=gene-IY40_RS14960;Dbxref=GenBank:WP_038630023.1;Name=WP_038630023.1;Ontology_term=GO:0006261,GO:0003676,GO:0003677,GO:0003887,GO:0008408;gbkey=CDS;gene=polA;go_function=nucleic acid binding|0003676||IEA,DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA-templated DNA replication|0006261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006708507.1;locus_tag=IY40_RS14960;product=DNA polymerase I;protein_id=WP_038630023.1;transl_table=11 NZ_JPQY01000023.1 RefSeq gene 115890 116786 . + . ID=gene-IY40_RS14965;Name=IY40_RS14965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS14965;old_locus_tag=IY40_15225 NZ_JPQY01000023.1 Protein Homology CDS 115890 116786 . + 0 ID=cds-WP_025304720.1;Parent=gene-IY40_RS14965;Dbxref=GenBank:WP_025304720.1;Name=WP_025304720.1;Ontology_term=GO:0016746;gbkey=CDS;go_function=acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004931263.1;locus_tag=IY40_RS14965;product=acyltransferase;protein_id=WP_025304720.1;transl_table=11 NZ_JPQY01000023.1 RefSeq gene 116830 117453 . - . ID=gene-IY40_RS14970;Name=dsbA;gbkey=Gene;gene=dsbA;gene_biotype=protein_coding;locus_tag=IY40_RS14970;old_locus_tag=IY40_15230 NZ_JPQY01000023.1 Protein Homology CDS 116830 117453 . - 0 ID=cds-WP_025304721.1;Parent=gene-IY40_RS14970;Dbxref=GenBank:WP_025304721.1;Name=WP_025304721.1;Ontology_term=GO:0016491;gbkey=CDS;gene=dsbA;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019080347.1;locus_tag=IY40_RS14970;product=thiol:disulfide interchange protein DsbA;protein_id=WP_025304721.1;transl_table=11 NZ_JPQY01000023.1 RefSeq gene 117483 118469 . - . ID=gene-IY40_RS14975;Name=IY40_RS14975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS14975;old_locus_tag=IY40_15235 NZ_JPQY01000023.1 Protein Homology CDS 117483 118469 . - 0 ID=cds-WP_043141088.1;Parent=gene-IY40_RS14975;Dbxref=GenBank:WP_043141088.1;Name=WP_043141088.1;Ontology_term=GO:0006468,GO:0004674;gbkey=CDS;go_function=protein serine/threonine kinase activity|0004674||IEA;go_process=protein phosphorylation|0006468||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016582340.1;locus_tag=IY40_RS14975;product=serine/threonine protein kinase;protein_id=WP_043141088.1;transl_table=11 NZ_JPQY01000023.1 RefSeq gene 118568 118837 . - . ID=gene-IY40_RS14980;Name=IY40_RS14980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS14980;old_locus_tag=IY40_15240 NZ_JPQY01000023.1 Protein Homology CDS 118568 118837 . - 0 ID=cds-WP_004931268.1;Parent=gene-IY40_RS14980;Dbxref=GenBank:WP_004931268.1;Name=WP_004931268.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005191202.1;locus_tag=IY40_RS14980;product=YihD family protein;protein_id=WP_004931268.1;transl_table=11 NZ_JPQY01000023.1 RefSeq gene 118986 119573 . + . ID=gene-IY40_RS14985;Name=mobA;gbkey=Gene;gene=mobA;gene_biotype=protein_coding;locus_tag=IY40_RS14985;old_locus_tag=IY40_15245 NZ_JPQY01000023.1 Protein Homology CDS 118986 119573 . + 0 ID=cds-WP_025304724.1;Parent=gene-IY40_RS14985;Dbxref=GenBank:WP_025304724.1;Name=WP_025304724.1;Ontology_term=GO:0006777,GO:0003824;gbkey=CDS;gene=mobA;go_function=catalytic activity|0003824||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004931270.1;locus_tag=IY40_RS14985;product=molybdenum cofactor guanylyltransferase MobA;protein_id=WP_025304724.1;transl_table=11 NZ_JPQY01000023.1 RefSeq gene 119573 120091 . + . ID=gene-IY40_RS14990;Name=mobB;gbkey=Gene;gene=mobB;gene_biotype=protein_coding;locus_tag=IY40_RS14990;old_locus_tag=IY40_15250 NZ_JPQY01000023.1 Protein Homology CDS 119573 120091 . + 0 ID=cds-WP_043141091.1;Parent=gene-IY40_RS14990;Dbxref=GenBank:WP_043141091.1;Name=WP_043141091.1;Ontology_term=GO:0006777,GO:0005525;gbkey=CDS;gene=mobB;go_function=GTP binding|0005525||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004953475.1;locus_tag=IY40_RS14990;product=molybdopterin-guanine dinucleotide biosynthesis protein MobB;protein_id=WP_043141091.1;transl_table=11 NZ_JPQY01000023.1 RefSeq gene 120164 120279 . - . ID=gene-IY40_RS14995;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=IY40_RS14995;old_locus_tag=IY40_15255 NZ_JPQY01000023.1 cmsearch rRNA 120164 120279 . - . ID=rna-IY40_RS14995;Parent=gene-IY40_RS14995;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=IY40_RS14995;product=5S ribosomal RNA NZ_JPQY01000023.1 cmsearch exon 120164 120279 . - . ID=exon-IY40_RS14995-1;Parent=rna-IY40_RS14995;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=IY40_RS14995;product=5S ribosomal RNA ##sequence-region NZ_JPQY01000024.1 1 77622 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=615 NZ_JPQY01000024.1 RefSeq region 1 77622 . + . ID=NZ_JPQY01000024.1:1..77622;Dbxref=taxon:615;collected-by=Mahloro H. Serepa%3B Vincent M. Gray;collection-date=2013-04-11;country=South Africa: North West Province;gbkey=Src;genome=genomic;identified-by=Mahloro H. Serepa%3B Vincent M. Gray;isolation-source=entomopathogenic nematode Oscheius sp. MCB living in soil;mol_type=genomic DNA;nat-host=Oscheius sp. MCB;strain=MCB NZ_JPQY01000024.1 RefSeq gene 690 1475 . - . ID=gene-IY40_RS15000;Name=IY40_RS15000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS15000;old_locus_tag=IY40_15260 NZ_JPQY01000024.1 Protein Homology CDS 690 1475 . - 0 ID=cds-WP_043141115.1;Parent=gene-IY40_RS15000;Dbxref=GenBank:WP_043141115.1;Name=WP_043141115.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004943650.1;locus_tag=IY40_RS15000;product=heme ABC transporter ATP-binding protein;protein_id=WP_043141115.1;transl_table=11 NZ_JPQY01000024.1 RefSeq gene 1468 2472 . - . ID=gene-IY40_RS15005;Name=IY40_RS15005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS15005;old_locus_tag=IY40_15265 NZ_JPQY01000024.1 Protein Homology CDS 1468 2472 . - 0 ID=cds-WP_043141118.1;Parent=gene-IY40_RS15005;Dbxref=GenBank:WP_043141118.1;Name=WP_043141118.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004943655.1;locus_tag=IY40_RS15005;product=FecCD family ABC transporter permease;protein_id=WP_043141118.1;transl_table=11 NZ_JPQY01000024.1 RefSeq gene 2472 3302 . - . ID=gene-IY40_RS15010;Name=IY40_RS15010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS15010;old_locus_tag=IY40_15270 NZ_JPQY01000024.1 Protein Homology CDS 2472 3302 . - 0 ID=cds-WP_025302635.1;Parent=gene-IY40_RS15010;Dbxref=GenBank:WP_025302635.1;Name=WP_025302635.1;Ontology_term=GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004931392.1;locus_tag=IY40_RS15010;product=heme/hemin ABC transporter substrate-binding protein;protein_id=WP_025302635.1;transl_table=11 NZ_JPQY01000024.1 RefSeq gene 3299 4336 . - . ID=gene-IY40_RS15015;Name=IY40_RS15015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS15015;old_locus_tag=IY40_15275 NZ_JPQY01000024.1 Protein Homology CDS 3299 4336 . - 0 ID=cds-WP_025302636.1;Parent=gene-IY40_RS15015;Dbxref=GenBank:WP_025302636.1;Name=WP_025302636.1;Ontology_term=GO:0006826;gbkey=CDS;go_process=iron ion transport|0006826||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209061.1;locus_tag=IY40_RS15015;product=hemin-degrading factor;protein_id=WP_025302636.1;transl_table=11 NZ_JPQY01000024.1 RefSeq gene 4403 6445 . - . ID=gene-IY40_RS15020;Name=IY40_RS15020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS15020;old_locus_tag=IY40_15280 NZ_JPQY01000024.1 Protein Homology CDS 4403 6445 . - 0 ID=cds-WP_043141123.1;Parent=gene-IY40_RS15020;Dbxref=GenBank:WP_043141123.1;Name=WP_043141123.1;Ontology_term=GO:0055085,GO:0022857,GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011815406.1;locus_tag=IY40_RS15020;product=TonB-dependent hemoglobin/transferrin/lactoferrin family receptor;protein_id=WP_043141123.1;transl_table=11 NZ_JPQY01000024.1 RefSeq gene 6540 6722 . - . ID=gene-IY40_RS15025;Name=hemP;gbkey=Gene;gene=hemP;gene_biotype=protein_coding;locus_tag=IY40_RS15025;old_locus_tag=IY40_15285 NZ_JPQY01000024.1 Protein Homology CDS 6540 6722 . - 0 ID=cds-WP_043141213.1;Parent=gene-IY40_RS15025;Dbxref=GenBank:WP_043141213.1;Name=WP_043141213.1;gbkey=CDS;gene=hemP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016927944.1;locus_tag=IY40_RS15025;product=hemin uptake protein HemP;protein_id=WP_043141213.1;transl_table=11 NZ_JPQY01000024.1 RefSeq gene 6894 7379 . - . ID=gene-IY40_RS15030;Name=IY40_RS15030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS15030;old_locus_tag=IY40_15290 NZ_JPQY01000024.1 Protein Homology CDS 6894 7379 . - 0 ID=cds-WP_025302639.1;Parent=gene-IY40_RS15030;Dbxref=GenBank:WP_025302639.1;Name=WP_025302639.1;Ontology_term=GO:0004602,GO:0043295;gbkey=CDS;go_function=glutathione peroxidase activity|0004602||IEA,glutathione binding|0043295||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012144903.1;locus_tag=IY40_RS15030;product=glutathione peroxidase;protein_id=WP_025302639.1;transl_table=11 NZ_JPQY01000024.1 RefSeq gene 7486 8532 . - . ID=gene-IY40_RS15035;Name=IY40_RS15035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS15035;old_locus_tag=IY40_15295 NZ_JPQY01000024.1 Protein Homology CDS 7486 8532 . - 0 ID=cds-WP_004931381.1;Parent=gene-IY40_RS15035;Dbxref=GenBank:WP_004931381.1;Name=WP_004931381.1;Ontology_term=GO:0009073,GO:0016832;gbkey=CDS;go_function=aldehyde-lyase activity|0016832||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211815.1;locus_tag=IY40_RS15035;product=3-deoxy-7-phosphoheptulonate synthase;protein_id=WP_004931381.1;transl_table=11 NZ_JPQY01000024.1 RefSeq gene 8730 9590 . - . ID=gene-IY40_RS15040;Name=ppsR;gbkey=Gene;gene=ppsR;gene_biotype=protein_coding;locus_tag=IY40_RS15040;old_locus_tag=IY40_15300 NZ_JPQY01000024.1 Protein Homology CDS 8730 9590 . - 0 ID=cds-WP_161781785.1;Parent=gene-IY40_RS15040;Dbxref=GenBank:WP_161781785.1;Name=WP_161781785.1;Ontology_term=GO:0004674,GO:0005524,GO:0016776,GO:0043531;gbkey=CDS;gene=ppsR;go_function=protein serine/threonine kinase activity|0004674||IEA,ATP binding|0005524||IEA,phosphotransferase activity%2C phosphate group as acceptor|0016776||IEA,ADP binding|0043531||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004963589.1;locus_tag=IY40_RS15040;product=posphoenolpyruvate synthetase regulatory kinase/phosphorylase PpsR;protein_id=WP_161781785.1;transl_table=11 NZ_JPQY01000024.1 RefSeq gene 10060 12438 . + . ID=gene-IY40_RS15045;Name=ppsA;gbkey=Gene;gene=ppsA;gene_biotype=protein_coding;locus_tag=IY40_RS15045;old_locus_tag=IY40_15305 NZ_JPQY01000024.1 Protein Homology CDS 10060 12438 . + 0 ID=cds-WP_043141130.1;Parent=gene-IY40_RS15045;Dbxref=GenBank:WP_043141130.1;Name=WP_043141130.1;Ontology_term=GO:0006090,GO:0016310,GO:0005524,GO:0008986,GO:0016772;gbkey=CDS;gene=ppsA;go_function=ATP binding|0005524||IEA,pyruvate%2C water dikinase activity|0008986||IEA,transferase activity%2C transferring phosphorus-containing groups|0016772||IEA;go_process=pyruvate metabolic process|0006090||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004931376.1;locus_tag=IY40_RS15045;product=phosphoenolpyruvate synthase;protein_id=WP_043141130.1;transl_table=11 NZ_JPQY01000024.1 RefSeq gene 12548 12657 . - . ID=gene-IY40_RS25360;Name=rprA;gbkey=Gene;gene=rprA;gene_biotype=antisense_RNA;locus_tag=IY40_RS25360 NZ_JPQY01000024.1 cmsearch antisense_RNA 12548 12657 . - . ID=rna-IY40_RS25360;Parent=gene-IY40_RS25360;Dbxref=RFAM:RF00034;gbkey=ncRNA;gene=rprA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=IY40_RS25360;product=antisense sRNA RprA NZ_JPQY01000024.1 cmsearch exon 12548 12657 . - . ID=exon-IY40_RS25360-1;Parent=rna-IY40_RS25360;Dbxref=RFAM:RF00034;gbkey=ncRNA;gene=rprA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=IY40_RS25360;product=antisense sRNA RprA NZ_JPQY01000024.1 RefSeq gene 12916 14016 . - . ID=gene-IY40_RS15050;Name=ydiK;gbkey=Gene;gene=ydiK;gene_biotype=protein_coding;locus_tag=IY40_RS15050;old_locus_tag=IY40_15310 NZ_JPQY01000024.1 Protein Homology CDS 12916 14016 . - 0 ID=cds-WP_025302642.1;Parent=gene-IY40_RS15050;Dbxref=GenBank:WP_025302642.1;Name=WP_025302642.1;gbkey=CDS;gene=ydiK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004943684.1;locus_tag=IY40_RS15050;product=AI-2E family transporter YdiK;protein_id=WP_025302642.1;transl_table=11 NZ_JPQY01000024.1 RefSeq gene 14262 17318 . + . ID=gene-IY40_RS15055;Name=ydiJ;gbkey=Gene;gene=ydiJ;gene_biotype=protein_coding;locus_tag=IY40_RS15055;old_locus_tag=IY40_15315 NZ_JPQY01000024.1 Protein Homology CDS 14262 17318 . + 0 ID=cds-WP_043141132.1;Parent=gene-IY40_RS15055;Dbxref=GenBank:WP_043141132.1;Name=WP_043141132.1;Ontology_term=GO:1903457,GO:0008720,GO:0046872;gbkey=CDS;gene=ydiJ;go_function=D-lactate dehydrogenase (NAD+) activity|0008720||IEA,metal ion binding|0046872||IEA;go_process=lactate catabolic process|1903457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004931371.1;locus_tag=IY40_RS15055;product=D-2-hydroxyglutarate dehydrogenase YdiJ;protein_id=WP_043141132.1;transl_table=11 NZ_JPQY01000024.1 RefSeq gene 17315 17731 . + . ID=gene-IY40_RS15060;Name=menI;gbkey=Gene;gene=menI;gene_biotype=protein_coding;locus_tag=IY40_RS15060;old_locus_tag=IY40_15320 NZ_JPQY01000024.1 Protein Homology CDS 17315 17731 . + 0 ID=cds-WP_016927938.1;Parent=gene-IY40_RS15060;Dbxref=GenBank:WP_016927938.1;Name=WP_016927938.1;gbkey=CDS;gene=menI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012144909.1;locus_tag=IY40_RS15060;product=1%2C4-dihydroxy-2-naphthoyl-CoA hydrolase;protein_id=WP_016927938.1;transl_table=11 NZ_JPQY01000024.1 RefSeq gene 17777 18181 . - . ID=gene-IY40_RS15065;Name=IY40_RS15065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS15065;old_locus_tag=IY40_15325 NZ_JPQY01000024.1 Protein Homology CDS 17777 18181 . - 0 ID=cds-WP_004931369.1;Parent=gene-IY40_RS15065;Dbxref=GenBank:WP_004931369.1;Name=WP_004931369.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015672149.1;locus_tag=IY40_RS15065;product=hypothetical protein;protein_id=WP_004931369.1;transl_table=11 NZ_JPQY01000024.1 RefSeq gene 18708 19079 . + . ID=gene-IY40_RS15070;Name=sufA;gbkey=Gene;gene=sufA;gene_biotype=protein_coding;locus_tag=IY40_RS15070;old_locus_tag=IY40_15330 NZ_JPQY01000024.1 Protein Homology CDS 18708 19079 . + 0 ID=cds-WP_004931368.1;Parent=gene-IY40_RS15070;Dbxref=GenBank:WP_004931368.1;Name=WP_004931368.1;gbkey=CDS;gene=sufA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304022.1;locus_tag=IY40_RS15070;product=Fe-S cluster assembly scaffold SufA;protein_id=WP_004931368.1;transl_table=11 NZ_JPQY01000024.1 RefSeq gene 19094 20590 . + . ID=gene-IY40_RS15075;Name=sufB;gbkey=Gene;gene=sufB;gene_biotype=protein_coding;locus_tag=IY40_RS15075;old_locus_tag=IY40_15335 NZ_JPQY01000024.1 Protein Homology CDS 19094 20590 . + 0 ID=cds-WP_025302644.1;Parent=gene-IY40_RS15075;Dbxref=GenBank:WP_025302644.1;Name=WP_025302644.1;Ontology_term=GO:0016226;gbkey=CDS;gene=sufB;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192536.1;locus_tag=IY40_RS15075;product=Fe-S cluster assembly protein SufB;protein_id=WP_025302644.1;transl_table=11 NZ_JPQY01000024.1 RefSeq gene 20634 21380 . + . ID=gene-IY40_RS15080;Name=sufC;gbkey=Gene;gene=sufC;gene_biotype=protein_coding;locus_tag=IY40_RS15080;old_locus_tag=IY40_15340 NZ_JPQY01000024.1 Protein Homology CDS 20634 21380 . + 0 ID=cds-WP_016927936.1;Parent=gene-IY40_RS15080;Dbxref=GenBank:WP_016927936.1;Name=WP_016927936.1;Ontology_term=GO:0005524;gbkey=CDS;gene=sufC;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009112393.1;locus_tag=IY40_RS15080;product=Fe-S cluster assembly ATPase SufC;protein_id=WP_016927936.1;transl_table=11 NZ_JPQY01000024.1 RefSeq gene 21355 22641 . + . ID=gene-IY40_RS15085;Name=sufD;gbkey=Gene;gene=sufD;gene_biotype=protein_coding;locus_tag=IY40_RS15085;old_locus_tag=IY40_15345 NZ_JPQY01000024.1 Protein Homology CDS 21355 22641 . + 0 ID=cds-WP_043141137.1;Parent=gene-IY40_RS15085;Dbxref=GenBank:WP_043141137.1;Name=WP_043141137.1;Ontology_term=GO:0016226;gbkey=CDS;gene=sufD;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004943708.1;locus_tag=IY40_RS15085;product=Fe-S cluster assembly protein SufD;protein_id=WP_043141137.1;transl_table=11 NZ_JPQY01000024.1 RefSeq gene 22638 23864 . + . ID=gene-IY40_RS15090;Name=sufS;gbkey=Gene;gene=sufS;gene_biotype=protein_coding;locus_tag=IY40_RS15090;old_locus_tag=IY40_15350 NZ_JPQY01000024.1 Protein Homology CDS 22638 23864 . + 0 ID=cds-WP_043141139.1;Parent=gene-IY40_RS15090;Dbxref=GenBank:WP_043141139.1;Name=WP_043141139.1;Ontology_term=GO:0006534,GO:0030170,GO:0031071;gbkey=CDS;gene=sufS;go_function=pyridoxal phosphate binding|0030170||IEA,cysteine desulfurase activity|0031071||IEA;go_process=cysteine metabolic process|0006534||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012229769.1;locus_tag=IY40_RS15090;product=cysteine desulfurase SufS;protein_id=WP_043141139.1;transl_table=11 NZ_JPQY01000024.1 RefSeq gene 23901 24317 . + . ID=gene-IY40_RS15095;Name=sufE;gbkey=Gene;gene=sufE;gene_biotype=protein_coding;locus_tag=IY40_RS15095;old_locus_tag=IY40_15355 NZ_JPQY01000024.1 Protein Homology CDS 23901 24317 . + 0 ID=cds-WP_025302647.1;Parent=gene-IY40_RS15095;Dbxref=GenBank:WP_025302647.1;Name=WP_025302647.1;gbkey=CDS;gene=sufE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019455999.1;locus_tag=IY40_RS15095;product=cysteine desulfuration protein SufE;protein_id=WP_025302647.1;transl_table=11 NZ_JPQY01000024.1 RefSeq gene 24614 25627 . + . ID=gene-IY40_RS15100;Name=IY40_RS15100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS15100;old_locus_tag=IY40_15360 NZ_JPQY01000024.1 Protein Homology CDS 24614 25627 . + 0 ID=cds-WP_025302648.1;Parent=gene-IY40_RS15100;Dbxref=GenBank:WP_025302648.1;Name=WP_025302648.1;Ontology_term=GO:0016740;gbkey=CDS;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012144917.1;locus_tag=IY40_RS15100;product=L%2CD-transpeptidase family protein;protein_id=WP_025302648.1;transl_table=11 NZ_JPQY01000024.1 RefSeq gene 25768 26004 . - . ID=gene-IY40_RS15105;Name=IY40_RS15105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS15105;old_locus_tag=IY40_15365 NZ_JPQY01000024.1 Protein Homology CDS 25768 26004 . - 0 ID=cds-WP_004931354.1;Parent=gene-IY40_RS15105;Dbxref=GenBank:WP_004931354.1;Name=WP_004931354.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004157411.1;locus_tag=IY40_RS15105;product=major outer membrane lipoprotein;protein_id=WP_004931354.1;transl_table=11 NZ_JPQY01000024.1 RefSeq gene 26313 27725 . - . ID=gene-IY40_RS15110;Name=pykF;gbkey=Gene;gene=pykF;gene_biotype=protein_coding;locus_tag=IY40_RS15110;old_locus_tag=IY40_15370 NZ_JPQY01000024.1 Protein Homology CDS 26313 27725 . - 0 ID=cds-WP_025302649.1;Parent=gene-IY40_RS15110;Dbxref=GenBank:WP_025302649.1;Name=WP_025302649.1;Ontology_term=GO:0006096,GO:0004743;gbkey=CDS;gene=pykF;go_function=pyruvate kinase activity|0004743||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010346010.1;locus_tag=IY40_RS15110;product=pyruvate kinase PykF;protein_id=WP_025302649.1;transl_table=11 NZ_JPQY01000024.1 RefSeq gene 28119 28424 . - . ID=gene-IY40_RS15115;Name=IY40_RS15115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS15115;old_locus_tag=IY40_15375 NZ_JPQY01000024.1 Protein Homology CDS 28119 28424 . - 0 ID=cds-WP_025302650.1;Parent=gene-IY40_RS15115;Dbxref=GenBank:WP_025302650.1;Name=WP_025302650.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016927932.1;locus_tag=IY40_RS15115;product=cupin domain-containing protein;protein_id=WP_025302650.1;transl_table=11 NZ_JPQY01000024.1 RefSeq gene 28546 28622 . - . ID=gene-IY40_RS15120;Name=IY40_RS15120;gbkey=Gene;gene_biotype=tRNA;locus_tag=IY40_RS15120;old_locus_tag=IY40_15380 NZ_JPQY01000024.1 tRNAscan-SE tRNA 28546 28622 . - . ID=rna-IY40_RS15120;Parent=gene-IY40_RS15120;anticodon=(pos:complement(28586..28588));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=IY40_RS15120;product=tRNA-Val NZ_JPQY01000024.1 tRNAscan-SE exon 28546 28622 . - . ID=exon-IY40_RS15120-1;Parent=rna-IY40_RS15120;anticodon=(pos:complement(28586..28588));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=IY40_RS15120;product=tRNA-Val NZ_JPQY01000024.1 RefSeq gene 28643 28719 . - . ID=gene-IY40_RS15125;Name=IY40_RS15125;gbkey=Gene;gene_biotype=tRNA;locus_tag=IY40_RS15125;old_locus_tag=IY40_15385 NZ_JPQY01000024.1 tRNAscan-SE tRNA 28643 28719 . - . ID=rna-IY40_RS15125;Parent=gene-IY40_RS15125;anticodon=(pos:complement(28683..28685));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=IY40_RS15125;product=tRNA-Val NZ_JPQY01000024.1 tRNAscan-SE exon 28643 28719 . - . ID=exon-IY40_RS15125-1;Parent=rna-IY40_RS15125;anticodon=(pos:complement(28683..28685));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=IY40_RS15125;product=tRNA-Val NZ_JPQY01000024.1 RefSeq gene 28740 28816 . - . ID=gene-IY40_RS15130;Name=IY40_RS15130;gbkey=Gene;gene_biotype=tRNA;locus_tag=IY40_RS15130;old_locus_tag=IY40_15390 NZ_JPQY01000024.1 tRNAscan-SE tRNA 28740 28816 . - . ID=rna-IY40_RS15130;Parent=gene-IY40_RS15130;anticodon=(pos:complement(28780..28782));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=IY40_RS15130;product=tRNA-Val NZ_JPQY01000024.1 tRNAscan-SE exon 28740 28816 . - . ID=exon-IY40_RS15130-1;Parent=rna-IY40_RS15130;anticodon=(pos:complement(28780..28782));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=IY40_RS15130;product=tRNA-Val NZ_JPQY01000024.1 RefSeq gene 28998 30374 . - . ID=gene-IY40_RS15135;Name=IY40_RS15135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS15135;old_locus_tag=IY40_15395 NZ_JPQY01000024.1 Protein Homology CDS 28998 30374 . - 0 ID=cds-WP_043141143.1;Parent=gene-IY40_RS15135;Dbxref=GenBank:WP_043141143.1;Name=WP_043141143.1;Ontology_term=GO:0006855,GO:0042910,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=xenobiotic transmembrane transporter activity|0042910||IEA;go_process=xenobiotic transmembrane transport|0006855||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001175077.1;locus_tag=IY40_RS15135;product=MATE family efflux transporter;protein_id=WP_043141143.1;transl_table=11 NZ_JPQY01000024.1 RefSeq gene 30614 31264 . + . ID=gene-IY40_RS15140;Name=IY40_RS15140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS15140;old_locus_tag=IY40_15400 NZ_JPQY01000024.1 Protein Homology CDS 30614 31264 . + 0 ID=cds-WP_025302652.1;Parent=gene-IY40_RS15140;Dbxref=GenBank:WP_025302652.1;Name=WP_025302652.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004931347.1;locus_tag=IY40_RS15140;product=riboflavin synthase;protein_id=WP_025302652.1;transl_table=11 NZ_JPQY01000024.1 RefSeq gene 31319 31612 . + . ID=gene-IY40_RS15145;Name=IY40_RS15145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS15145;old_locus_tag=IY40_15405 NZ_JPQY01000024.1 Protein Homology CDS 31319 31612 . + 0 ID=cds-WP_016927929.1;Parent=gene-IY40_RS15145;Dbxref=GenBank:WP_016927929.1;Name=WP_016927929.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004931344.1;locus_tag=IY40_RS15145;product=I78 family peptidase inhibitor;protein_id=WP_016927929.1;transl_table=11 NZ_JPQY01000024.1 RefSeq gene 31686 32837 . - . ID=gene-IY40_RS15150;Name=cfa;gbkey=Gene;gene=cfa;gene_biotype=protein_coding;locus_tag=IY40_RS15150;old_locus_tag=IY40_15410 NZ_JPQY01000024.1 Protein Homology CDS 31686 32837 . - 0 ID=cds-WP_043141148.1;Parent=gene-IY40_RS15150;Dbxref=GenBank:WP_043141148.1;Name=WP_043141148.1;gbkey=CDS;gene=cfa;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019079322.1;locus_tag=IY40_RS15150;product=cyclopropane fatty acyl phospholipid synthase;protein_id=WP_043141148.1;transl_table=11 NZ_JPQY01000024.1 RefSeq gene 33181 34392 . - . ID=gene-IY40_RS15155;Name=punC;gbkey=Gene;gene=punC;gene_biotype=protein_coding;gene_synonym=ydhC;locus_tag=IY40_RS15155;old_locus_tag=IY40_15415 NZ_JPQY01000024.1 Protein Homology CDS 33181 34392 . - 0 ID=cds-WP_043141151.1;Parent=gene-IY40_RS15155;Dbxref=GenBank:WP_043141151.1;Name=WP_043141151.1;Ontology_term=GO:1990961,GO:0042910,GO:0016020;gbkey=CDS;gene=punC;go_component=membrane|0016020||IEA;go_function=xenobiotic transmembrane transporter activity|0042910||IEA;go_process=xenobiotic detoxification by transmembrane export across the plasma membrane|1990961||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017892658.1;locus_tag=IY40_RS15155;product=purine nucleoside transporter PunC;protein_id=WP_043141151.1;transl_table=11 NZ_JPQY01000024.1 RefSeq gene 34516 35460 . + . ID=gene-IY40_RS15160;Name=punR;gbkey=Gene;gene=punR;gene_biotype=protein_coding;locus_tag=IY40_RS15160;old_locus_tag=IY40_15420 NZ_JPQY01000024.1 Protein Homology CDS 34516 35460 . + 0 ID=cds-WP_025302655.1;Parent=gene-IY40_RS15160;Dbxref=GenBank:WP_025302655.1;Name=WP_025302655.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=punR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006324938.1;locus_tag=IY40_RS15160;product=DNA-binding transcriptional activator PunR;protein_id=WP_025302655.1;transl_table=11 NZ_JPQY01000024.1 RefSeq gene 35457 36482 . - . ID=gene-IY40_RS15165;Name=purR;gbkey=Gene;gene=purR;gene_biotype=protein_coding;locus_tag=IY40_RS15165;old_locus_tag=IY40_15425 NZ_JPQY01000024.1 Protein Homology CDS 35457 36482 . - 0 ID=cds-WP_025302656.1;Parent=gene-IY40_RS15165;Dbxref=GenBank:WP_025302656.1;Name=WP_025302656.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=purR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005127190.1;locus_tag=IY40_RS15165;product=HTH-type transcriptional repressor PurR;protein_id=WP_025302656.1;transl_table=11 NZ_JPQY01000024.1 RefSeq gene 36807 36896 . + . ID=gene-IY40_RS26020;Name=cydH;gbkey=Gene;gene=cydH;gene_biotype=protein_coding;gene_synonym=ynhF;locus_tag=IY40_RS26020 NZ_JPQY01000024.1 Protein Homology CDS 36807 36896 . + 0 ID=cds-WP_019455989.1;Parent=gene-IY40_RS26020;Dbxref=GenBank:WP_019455989.1;Name=WP_019455989.1;gbkey=CDS;gene=cydH;inference=COORDINATES: protein motif:HMM:NF033411.1;locus_tag=IY40_RS26020;product=cytochrome bd-I oxidase subunit CydH;protein_id=WP_019455989.1;transl_table=11 NZ_JPQY01000024.1 RefSeq gene 36958 37536 . - . ID=gene-IY40_RS15170;Name=sodB;gbkey=Gene;gene=sodB;gene_biotype=protein_coding;locus_tag=IY40_RS15170;old_locus_tag=IY40_15435 NZ_JPQY01000024.1 Protein Homology CDS 36958 37536 . - 0 ID=cds-WP_004931333.1;Parent=gene-IY40_RS15170;Dbxref=GenBank:WP_004931333.1;Name=WP_004931333.1;Ontology_term=GO:0006801,GO:0004784,GO:0046872;gbkey=CDS;gene=sodB;go_function=superoxide dismutase activity|0004784||IEA,metal ion binding|0046872||IEA;go_process=superoxide metabolic process|0006801||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010931119.1;locus_tag=IY40_RS15170;product=superoxide dismutase [Fe];protein_id=WP_004931333.1;transl_table=11 NZ_JPQY01000024.1 RefSeq gene 37735 38553 . - . ID=gene-IY40_RS15175;Name=IY40_RS15175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS15175;old_locus_tag=IY40_15440 NZ_JPQY01000024.1 Protein Homology CDS 37735 38553 . - 0 ID=cds-WP_043141154.1;Parent=gene-IY40_RS15175;Dbxref=GenBank:WP_043141154.1;Name=WP_043141154.1;Ontology_term=GO:0000270,GO:0006508,GO:0008233,GO:0008234,GO:0016787;gbkey=CDS;go_function=peptidase activity|0008233||IEA,cysteine-type peptidase activity|0008234||IEA,hydrolase activity|0016787||IEA;go_process=peptidoglycan metabolic process|0000270||IEA,proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004943741.1;locus_tag=IY40_RS15175;product=C40 family peptidase;protein_id=WP_043141154.1;transl_table=11 NZ_JPQY01000024.1 RefSeq gene 38970 39317 . + . ID=gene-IY40_RS15180;Name=IY40_RS15180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS15180;old_locus_tag=IY40_15445 NZ_JPQY01000024.1 Protein Homology CDS 38970 39317 . + 0 ID=cds-WP_004931329.1;Parent=gene-IY40_RS15180;Dbxref=GenBank:WP_004931329.1;Name=WP_004931329.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004931329.1;locus_tag=IY40_RS15180;product=Grx4 family monothiol glutaredoxin;protein_id=WP_004931329.1;transl_table=11 NZ_JPQY01000024.1 RefSeq gene 39386 40069 . - . ID=gene-IY40_RS15185;Name=rnt;gbkey=Gene;gene=rnt;gene_biotype=protein_coding;locus_tag=IY40_RS15185;old_locus_tag=IY40_15450 NZ_JPQY01000024.1 Protein Homology CDS 39386 40069 . - 0 ID=cds-WP_038874795.1;Parent=gene-IY40_RS15185;Dbxref=GenBank:WP_038874795.1;Name=WP_038874795.1;Ontology_term=GO:0006364,GO:0042780,GO:0016896;gbkey=CDS;gene=rnt;go_function=RNA exonuclease activity%2C producing 5'-phosphomonoesters|0016896||IEA;go_process=rRNA processing|0006364||IEA,tRNA 3'-end processing|0042780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016927925.1;locus_tag=IY40_RS15185;product=ribonuclease T;protein_id=WP_038874795.1;transl_table=11 NZ_JPQY01000024.1 RefSeq gene 40149 40556 . - . ID=gene-IY40_RS15190;Name=gloA;gbkey=Gene;gene=gloA;gene_biotype=protein_coding;locus_tag=IY40_RS15190;old_locus_tag=IY40_15455 NZ_JPQY01000024.1 Protein Homology CDS 40149 40556 . - 0 ID=cds-WP_004931325.1;Parent=gene-IY40_RS15190;Dbxref=GenBank:WP_004931325.1;Name=WP_004931325.1;gbkey=CDS;gene=gloA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210948.1;locus_tag=IY40_RS15190;product=lactoylglutathione lyase;protein_id=WP_004931325.1;transl_table=11 NZ_JPQY01000024.1 RefSeq gene 40892 41995 . - . ID=gene-IY40_RS15195;Name=nemA;gbkey=Gene;gene=nemA;gene_biotype=protein_coding;locus_tag=IY40_RS15195;old_locus_tag=IY40_15465 NZ_JPQY01000024.1 Protein Homology CDS 40892 41995 . - 0 ID=cds-WP_025302658.1;Parent=gene-IY40_RS15195;Dbxref=GenBank:WP_025302658.1;Name=WP_025302658.1;gbkey=CDS;gene=nemA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004931322.1;locus_tag=IY40_RS15195;product=alkene reductase;protein_id=WP_025302658.1;transl_table=11 NZ_JPQY01000024.1 RefSeq gene 42083 42703 . - . ID=gene-IY40_RS15200;Name=IY40_RS15200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS15200;old_locus_tag=IY40_15470 NZ_JPQY01000024.1 Protein Homology CDS 42083 42703 . - 0 ID=cds-WP_025302659.1;Parent=gene-IY40_RS15200;Dbxref=GenBank:WP_025302659.1;Name=WP_025302659.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004943759.1;locus_tag=IY40_RS15200;product=TetR/AcrR family transcriptional regulator;protein_id=WP_025302659.1;transl_table=11 NZ_JPQY01000024.1 RefSeq gene 42806 44443 . - . ID=gene-IY40_RS15205;Name=eptA;gbkey=Gene;gene=eptA;gene_biotype=protein_coding;locus_tag=IY40_RS15205;old_locus_tag=IY40_15475 NZ_JPQY01000024.1 Protein Homology CDS 42806 44443 . - 0 ID=cds-WP_025302660.1;Parent=gene-IY40_RS15205;Dbxref=GenBank:WP_025302660.1;Name=WP_025302660.1;Ontology_term=GO:0016772;gbkey=CDS;gene=eptA;go_function=transferase activity%2C transferring phosphorus-containing groups|0016772||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006324943.1;locus_tag=IY40_RS15205;product=phosphoethanolamine transferase EptA;protein_id=WP_025302660.1;transl_table=11 NZ_JPQY01000024.1 RefSeq gene 44583 45224 . - . ID=gene-IY40_RS15210;Name=IY40_RS15210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS15210;old_locus_tag=IY40_15480 NZ_JPQY01000024.1 Protein Homology CDS 44583 45224 . - 0 ID=cds-WP_043141164.1;Parent=gene-IY40_RS15210;Dbxref=GenBank:WP_043141164.1;Name=WP_043141164.1;Ontology_term=GO:0016491,GO:0070403;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017892667.1;locus_tag=IY40_RS15210;product=NAD(P)-dependent oxidoreductase;protein_id=WP_043141164.1;transl_table=11 NZ_JPQY01000024.1 RefSeq gene 45364 46293 . + . ID=gene-IY40_RS15215;Name=IY40_RS15215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS15215;old_locus_tag=IY40_15485 NZ_JPQY01000024.1 Protein Homology CDS 45364 46293 . + 0 ID=cds-WP_025302662.1;Parent=gene-IY40_RS15215;Dbxref=GenBank:WP_025302662.1;Name=WP_025302662.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013812684.1;locus_tag=IY40_RS15215;product=LysR substrate-binding domain-containing protein;protein_id=WP_025302662.1;transl_table=11 NZ_JPQY01000024.1 RefSeq gene 46317 46556 . + . ID=gene-IY40_RS15220;Name=IY40_RS15220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS15220;old_locus_tag=IY40_15490 NZ_JPQY01000024.1 Protein Homology CDS 46317 46556 . + 0 ID=cds-WP_015377731.1;Parent=gene-IY40_RS15220;Dbxref=GenBank:WP_015377731.1;Name=WP_015377731.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005169466.1;locus_tag=IY40_RS15220;product=DUF1289 domain-containing protein;protein_id=WP_015377731.1;transl_table=11 NZ_JPQY01000024.1 RefSeq gene 46656 47552 . + . ID=gene-IY40_RS15225;Name=IY40_RS15225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS15225;old_locus_tag=IY40_15495 NZ_JPQY01000024.1 Protein Homology CDS 46656 47552 . + 0 ID=cds-WP_025302663.1;Parent=gene-IY40_RS15225;Dbxref=GenBank:WP_025302663.1;Name=WP_025302663.1;Ontology_term=GO:0016491,GO:0050661;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019083060.1;locus_tag=IY40_RS15225;product=aldo/keto reductase;protein_id=WP_025302663.1;transl_table=11 NZ_JPQY01000024.1 RefSeq gene 47614 49458 . - . ID=gene-IY40_RS15230;Name=IY40_RS15230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS15230;old_locus_tag=IY40_15500 NZ_JPQY01000024.1 Protein Homology CDS 47614 49458 . - 0 ID=cds-WP_043141172.1;Parent=gene-IY40_RS15230;Dbxref=GenBank:WP_043141172.1;Name=WP_043141172.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019455978.1;locus_tag=IY40_RS15230;product=polyurethane esterase;protein_id=WP_043141172.1;transl_table=11 NZ_JPQY01000024.1 RefSeq gene 49700 50221 . + . ID=gene-IY40_RS15235;Name=sodC;gbkey=Gene;gene=sodC;gene_biotype=protein_coding;locus_tag=IY40_RS15235;old_locus_tag=IY40_15505 NZ_JPQY01000024.1 Protein Homology CDS 49700 50221 . + 0 ID=cds-WP_025302665.1;Parent=gene-IY40_RS15235;Dbxref=GenBank:WP_025302665.1;Name=WP_025302665.1;Ontology_term=GO:0004784;gbkey=CDS;gene=sodC;go_function=superoxide dismutase activity|0004784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019455977.1;locus_tag=IY40_RS15235;product=superoxide dismutase family protein;protein_id=WP_025302665.1;transl_table=11 NZ_JPQY01000024.1 RefSeq gene 50222 52252 . - . ID=gene-IY40_RS15240;Name=IY40_RS15240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS15240;old_locus_tag=IY40_15510 NZ_JPQY01000024.1 Protein Homology CDS 50222 52252 . - 0 ID=cds-WP_025302666.1;Parent=gene-IY40_RS15240;Dbxref=GenBank:WP_025302666.1;Name=WP_025302666.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004931307.1;locus_tag=IY40_RS15240;product=FUSC family protein;protein_id=WP_025302666.1;transl_table=11 NZ_JPQY01000024.1 RefSeq gene 52256 53119 . - . ID=gene-IY40_RS15245;Name=IY40_RS15245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS15245;old_locus_tag=IY40_15515 NZ_JPQY01000024.1 Protein Homology CDS 52256 53119 . - 0 ID=cds-WP_004931305.1;Parent=gene-IY40_RS15245;Dbxref=GenBank:WP_004931305.1;Name=WP_004931305.1;Ontology_term=GO:0006810,GO:0005215,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015377735.1;locus_tag=IY40_RS15245;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_004931305.1;transl_table=11 NZ_JPQY01000024.1 RefSeq gene 53123 53359 . - . ID=gene-IY40_RS25365;Name=IY40_RS25365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS25365 NZ_JPQY01000024.1 Protein Homology CDS 53123 53359 . - 0 ID=cds-WP_004931303.1;Parent=gene-IY40_RS25365;Dbxref=GenBank:WP_004931303.1;Name=WP_004931303.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012144944.1;locus_tag=IY40_RS25365;product=DUF1656 domain-containing protein;protein_id=WP_004931303.1;transl_table=11 NZ_JPQY01000024.1 RefSeq gene 53540 53971 . + . ID=gene-IY40_RS15250;Name=slyA;gbkey=Gene;gene=slyA;gene_biotype=protein_coding;locus_tag=IY40_RS15250;old_locus_tag=IY40_15520 NZ_JPQY01000024.1 Protein Homology CDS 53540 53971 . + 0 ID=cds-WP_004931301.1;Parent=gene-IY40_RS15250;Dbxref=GenBank:WP_004931301.1;Name=WP_004931301.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=slyA;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210955.1;locus_tag=IY40_RS15250;product=transcriptional regulator SlyA;protein_id=WP_004931301.1;transl_table=11 NZ_JPQY01000024.1 RefSeq gene 54064 54528 . - . ID=gene-IY40_RS15255;Name=IY40_RS15255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS15255;old_locus_tag=IY40_15525 NZ_JPQY01000024.1 Protein Homology CDS 54064 54528 . - 0 ID=cds-WP_025159710.1;Parent=gene-IY40_RS15255;Dbxref=GenBank:WP_025159710.1;Name=WP_025159710.1;Ontology_term=GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004943793.1;locus_tag=IY40_RS15255;product=outer membrane lipoprotein;protein_id=WP_025159710.1;transl_table=11 NZ_JPQY01000024.1 RefSeq gene 54880 56001 . + . ID=gene-IY40_RS15260;Name=anmK;gbkey=Gene;gene=anmK;gene_biotype=protein_coding;locus_tag=IY40_RS15260;old_locus_tag=IY40_15530 NZ_JPQY01000024.1 Protein Homology CDS 54880 56001 . + 0 ID=cds-WP_043141178.1;Parent=gene-IY40_RS15260;Dbxref=GenBank:WP_043141178.1;Name=WP_043141178.1;gbkey=CDS;gene=anmK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016927911.1;locus_tag=IY40_RS15260;product=anhydro-N-acetylmuramic acid kinase;protein_id=WP_043141178.1;transl_table=11 NZ_JPQY01000024.1 RefSeq gene 56047 56349 . + . ID=gene-IY40_RS15265;Name=IY40_RS15265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS15265;old_locus_tag=IY40_15535 NZ_JPQY01000024.1 Protein Homology CDS 56047 56349 . + 0 ID=cds-WP_043141183.1;Parent=gene-IY40_RS15265;Dbxref=GenBank:WP_043141183.1;Name=WP_043141183.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004931294.1;locus_tag=IY40_RS15265;product=MliC family protein;protein_id=WP_043141183.1;transl_table=11 NZ_JPQY01000024.1 RefSeq gene 56438 57091 . + . ID=gene-IY40_RS15270;Name=pdxH;gbkey=Gene;gene=pdxH;gene_biotype=protein_coding;locus_tag=IY40_RS15270;old_locus_tag=IY40_15540 NZ_JPQY01000024.1 Protein Homology CDS 56438 57091 . + 0 ID=cds-WP_043141187.1;Parent=gene-IY40_RS15270;Dbxref=GenBank:WP_043141187.1;Name=WP_043141187.1;Ontology_term=GO:0008615,GO:0004733,GO:0010181;gbkey=CDS;gene=pdxH;go_function=pyridoxamine phosphate oxidase activity|0004733||IEA,FMN binding|0010181||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105041.1;locus_tag=IY40_RS15270;product=pyridoxamine 5'-phosphate oxidase;protein_id=WP_043141187.1;transl_table=11 NZ_JPQY01000024.1 RefSeq gene 57230 58504 . + . ID=gene-IY40_RS15275;Name=tyrS;gbkey=Gene;gene=tyrS;gene_biotype=protein_coding;locus_tag=IY40_RS15275;old_locus_tag=IY40_15545 NZ_JPQY01000024.1 Protein Homology CDS 57230 58504 . + 0 ID=cds-WP_043141190.1;Parent=gene-IY40_RS15275;Dbxref=GenBank:WP_043141190.1;Name=WP_043141190.1;Ontology_term=GO:0006437,GO:0000166,GO:0004831,GO:0005524;gbkey=CDS;gene=tyrS;go_function=nucleotide binding|0000166||IEA,tyrosine-tRNA ligase activity|0004831||IEA,ATP binding|0005524||IEA;go_process=tyrosyl-tRNA aminoacylation|0006437||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012144950.1;locus_tag=IY40_RS15275;product=tyrosine--tRNA ligase;protein_id=WP_043141190.1;transl_table=11 NZ_JPQY01000024.1 RefSeq gene 58589 59449 . + . ID=gene-IY40_RS15280;Name=pdxY;gbkey=Gene;gene=pdxY;gene_biotype=protein_coding;locus_tag=IY40_RS15280;old_locus_tag=IY40_15550 NZ_JPQY01000024.1 Protein Homology CDS 58589 59449 . + 0 ID=cds-WP_043141216.1;Parent=gene-IY40_RS15280;Dbxref=GenBank:WP_043141216.1;Name=WP_043141216.1;Ontology_term=GO:0009443,GO:0008478;gbkey=CDS;gene=pdxY;go_function=pyridoxal kinase activity|0008478||IEA;go_process=pyridoxal 5'-phosphate salvage|0009443||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210961.1;locus_tag=IY40_RS15280;product=pyridoxal kinase PdxY;protein_id=WP_043141216.1;transl_table=11 NZ_JPQY01000024.1 RefSeq gene 59489 60094 . - . ID=gene-IY40_RS15285;Name=gstA;gbkey=Gene;gene=gstA;gene_biotype=protein_coding;locus_tag=IY40_RS15285;old_locus_tag=IY40_15555 NZ_JPQY01000024.1 Protein Homology CDS 59489 60094 . - 0 ID=cds-WP_025302671.1;Parent=gene-IY40_RS15285;Dbxref=GenBank:WP_025302671.1;Name=WP_025302671.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;gene=gstA;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210962.1;locus_tag=IY40_RS15285;product=glutathione transferase GstA;protein_id=WP_025302671.1;transl_table=11 NZ_JPQY01000024.1 RefSeq gene 60187 61071 . - . ID=gene-IY40_RS15290;Name=dapA;gbkey=Gene;gene=dapA;gene_biotype=protein_coding;locus_tag=IY40_RS15290;old_locus_tag=IY40_15560 NZ_JPQY01000024.1 Protein Homology CDS 60187 61071 . - 0 ID=cds-WP_043141193.1;Parent=gene-IY40_RS15290;Dbxref=GenBank:WP_043141193.1;Name=WP_043141193.1;Ontology_term=GO:0009089,GO:0008840;gbkey=CDS;gene=dapA;go_function=4-hydroxy-tetrahydrodipicolinate synthase activity|0008840||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019455966.1;locus_tag=IY40_RS15290;product=4-hydroxy-tetrahydrodipicolinate synthase;protein_id=WP_043141193.1;transl_table=11 NZ_JPQY01000024.1 RefSeq gene 61432 61695 . - . ID=gene-IY40_RS15295;Name=IY40_RS15295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS15295;old_locus_tag=IY40_15565 NZ_JPQY01000024.1 Protein Homology CDS 61432 61695 . - 0 ID=cds-WP_004938373.1;Parent=gene-IY40_RS15295;Dbxref=GenBank:WP_004938373.1;Name=WP_004938373.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004874270.1;locus_tag=IY40_RS15295;product=YjbD family protein;protein_id=WP_004938373.1;transl_table=11 NZ_JPQY01000024.1 RefSeq gene 61791 62486 . - . ID=gene-IY40_RS15300;Name=IY40_RS15300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS15300;old_locus_tag=IY40_15570 NZ_JPQY01000024.1 Protein Homology CDS 61791 62486 . - 0 ID=cds-WP_049204298.1;Parent=gene-IY40_RS15300;Dbxref=GenBank:WP_049204298.1;Name=WP_049204298.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004938376.1;locus_tag=IY40_RS15300;product=HD domain-containing protein;protein_id=WP_049204298.1;transl_table=11 NZ_JPQY01000024.1 RefSeq gene 62689 63081 . + . ID=gene-IY40_RS15305;Name=IY40_RS15305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS15305;old_locus_tag=IY40_15575 NZ_JPQY01000024.1 Protein Homology CDS 62689 63081 . + 0 ID=cds-WP_004938379.1;Parent=gene-IY40_RS15305;Dbxref=GenBank:WP_004938379.1;Name=WP_004938379.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004938379.1;locus_tag=IY40_RS15305;product=nuclear transport factor 2 family protein;protein_id=WP_004938379.1;transl_table=11 NZ_JPQY01000024.1 RefSeq gene 63078 63347 . - . ID=gene-IY40_RS15310;Name=IY40_RS15310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS15310;old_locus_tag=IY40_15580 NZ_JPQY01000024.1 Protein Homology CDS 63078 63347 . - 0 ID=cds-WP_004938382.1;Parent=gene-IY40_RS15310;Dbxref=GenBank:WP_004938382.1;Name=WP_004938382.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004938382.1;locus_tag=IY40_RS15310;product=hypothetical protein;protein_id=WP_004938382.1;transl_table=11 NZ_JPQY01000024.1 RefSeq gene 63624 64004 . + . ID=gene-IY40_RS15315;Name=IY40_RS15315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS15315;old_locus_tag=IY40_15585 NZ_JPQY01000024.1 Protein Homology CDS 63624 64004 . + 0 ID=cds-WP_025302674.1;Parent=gene-IY40_RS15315;Dbxref=GenBank:WP_025302674.1;Name=WP_025302674.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019455961.1;locus_tag=IY40_RS15315;product=nuclear transport factor 2 family protein;protein_id=WP_025302674.1;transl_table=11 NZ_JPQY01000024.1 RefSeq gene 64717 65097 . - . ID=gene-IY40_RS15320;Name=IY40_RS15320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS15320;old_locus_tag=IY40_15595 NZ_JPQY01000024.1 Protein Homology CDS 64717 65097 . - 0 ID=cds-WP_025302675.1;Parent=gene-IY40_RS15320;Dbxref=GenBank:WP_025302675.1;Name=WP_025302675.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019455960.1;locus_tag=IY40_RS15320;product=RidA family protein;protein_id=WP_025302675.1;transl_table=11 NZ_JPQY01000024.1 RefSeq gene 65280 66134 . + . ID=gene-IY40_RS15325;Name=IY40_RS15325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS15325;old_locus_tag=IY40_15600 NZ_JPQY01000024.1 Protein Homology CDS 65280 66134 . + 0 ID=cds-WP_043141201.1;Parent=gene-IY40_RS15325;Dbxref=GenBank:WP_043141201.1;Name=WP_043141201.1;Ontology_term=GO:0016310,GO:0005524,GO:0016773;gbkey=CDS;go_function=ATP binding|0005524||IEA,phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA;go_process=phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016927900.1;locus_tag=IY40_RS15325;product=aminoglycoside phosphotransferase family protein;protein_id=WP_043141201.1;transl_table=11 NZ_JPQY01000024.1 RefSeq gene 66099 66602 . - . ID=gene-IY40_RS15330;Name=IY40_RS15330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS15330;old_locus_tag=IY40_15605 NZ_JPQY01000024.1 Protein Homology CDS 66099 66602 . - 0 ID=cds-WP_033652588.1;Parent=gene-IY40_RS15330;Dbxref=GenBank:WP_033652588.1;Name=WP_033652588.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004938395.1;locus_tag=IY40_RS15330;product=cupin domain-containing protein;protein_id=WP_033652588.1;transl_table=11 NZ_JPQY01000024.1 RefSeq gene 66703 67890 . - . ID=gene-IY40_RS15335;Name=IY40_RS15335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS15335;old_locus_tag=IY40_15610 NZ_JPQY01000024.1 Protein Homology CDS 66703 67890 . - 0 ID=cds-WP_043141204.1;Parent=gene-IY40_RS15335;Dbxref=GenBank:WP_043141204.1;Name=WP_043141204.1;Ontology_term=GO:0042919,GO:0042925,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=benzoate transmembrane transporter activity|0042925||IEA;go_process=benzoate transport|0042919||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004938398.1;locus_tag=IY40_RS15335;product=benzoate/H(+) symporter BenE family transporter;protein_id=WP_043141204.1;transl_table=11 NZ_JPQY01000024.1 RefSeq gene 68006 68569 . + . ID=gene-IY40_RS15340;Name=IY40_RS15340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS15340;old_locus_tag=IY40_15615 NZ_JPQY01000024.1 Protein Homology CDS 68006 68569 . + 0 ID=cds-WP_025302679.1;Parent=gene-IY40_RS15340;Dbxref=GenBank:WP_025302679.1;Name=WP_025302679.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015377747.1;locus_tag=IY40_RS15340;product=helix-turn-helix domain-containing protein;protein_id=WP_025302679.1;transl_table=11 NZ_JPQY01000024.1 RefSeq gene 68764 70857 . + . ID=gene-IY40_RS15345;Name=IY40_RS15345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS15345;old_locus_tag=IY40_15620 NZ_JPQY01000024.1 Protein Homology CDS 68764 70857 . + 0 ID=cds-WP_043141208.1;Parent=gene-IY40_RS15345;Dbxref=GenBank:WP_043141208.1;Name=WP_043141208.1;Ontology_term=GO:0006508,GO:0004252;gbkey=CDS;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016927897.1;locus_tag=IY40_RS15345;product=prolyl oligopeptidase family serine peptidase;protein_id=WP_043141208.1;transl_table=11 NZ_JPQY01000024.1 RefSeq gene 70934 72448 . - . ID=gene-IY40_RS15350;Name=dtpA;gbkey=Gene;gene=dtpA;gene_biotype=protein_coding;locus_tag=IY40_RS15350;old_locus_tag=IY40_15625 NZ_JPQY01000024.1 Protein Homology CDS 70934 72448 . - 0 ID=cds-WP_025302681.1;Parent=gene-IY40_RS15350;Dbxref=GenBank:WP_025302681.1;Name=WP_025302681.1;Ontology_term=GO:0015833,GO:0055085,GO:1904680,GO:0016020;gbkey=CDS;gene=dtpA;go_component=membrane|0016020||IEA;go_function=peptide transmembrane transporter activity|1904680||IEA;go_process=peptide transport|0015833||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013812709.1;locus_tag=IY40_RS15350;product=dipeptide/tripeptide permease DtpA;protein_id=WP_025302681.1;transl_table=11 NZ_JPQY01000024.1 RefSeq gene 73053 73694 . - . ID=gene-IY40_RS15355;Name=nth;gbkey=Gene;gene=nth;gene_biotype=protein_coding;locus_tag=IY40_RS15355;old_locus_tag=IY40_15630 NZ_JPQY01000024.1 Protein Homology CDS 73053 73694 . - 0 ID=cds-WP_019455952.1;Parent=gene-IY40_RS15355;Dbxref=GenBank:WP_019455952.1;Name=WP_019455952.1;Ontology_term=GO:0006284,GO:0003906;gbkey=CDS;gene=nth;go_function=DNA-(apurinic or apyrimidinic site) endonuclease activity|0003906||IEA;go_process=base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004963383.1;locus_tag=IY40_RS15355;product=endonuclease III;protein_id=WP_019455952.1;transl_table=11 NZ_JPQY01000024.1 RefSeq gene 73694 74392 . - . ID=gene-IY40_RS15360;Name=IY40_RS15360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS15360;old_locus_tag=IY40_15635 NZ_JPQY01000024.1 Protein Homology CDS 73694 74392 . - 0 ID=cds-WP_025302682.1;Parent=gene-IY40_RS15360;Dbxref=GenBank:WP_025302682.1;Name=WP_025302682.1;Ontology_term=GO:0022900;gbkey=CDS;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004943876.1;locus_tag=IY40_RS15360;product=electron transport complex subunit E;protein_id=WP_025302682.1;transl_table=11 NZ_JPQY01000024.1 RefSeq gene 74389 75018 . - . ID=gene-IY40_RS15365;Name=rsxG;gbkey=Gene;gene=rsxG;gene_biotype=protein_coding;locus_tag=IY40_RS15365;old_locus_tag=IY40_15640 NZ_JPQY01000024.1 Protein Homology CDS 74389 75018 . - 0 ID=cds-WP_025302683.1;Parent=gene-IY40_RS15365;Dbxref=GenBank:WP_025302683.1;Name=WP_025302683.1;Ontology_term=GO:0022900,GO:0009055,GO:0010181,GO:0016020;gbkey=CDS;gene=rsxG;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,FMN binding|0010181||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105098.1;locus_tag=IY40_RS15365;product=electron transport complex subunit RsxG;protein_id=WP_025302683.1;transl_table=11 NZ_JPQY01000024.1 RefSeq gene 75028 76113 . - . ID=gene-IY40_RS15370;Name=rsxD;gbkey=Gene;gene=rsxD;gene_biotype=protein_coding;locus_tag=IY40_RS15370;old_locus_tag=IY40_15645 NZ_JPQY01000024.1 Protein Homology CDS 75028 76113 . - 0 ID=cds-WP_025302684.1;Parent=gene-IY40_RS15370;Dbxref=GenBank:WP_025302684.1;Name=WP_025302684.1;Ontology_term=GO:0022900,GO:0055085,GO:0016020;gbkey=CDS;gene=rsxD;go_component=membrane|0016020||IEA;go_process=electron transport chain|0022900||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004963375.1;locus_tag=IY40_RS15370;product=electron transport complex subunit RsxD;protein_id=WP_025302684.1;transl_table=11 NZ_JPQY01000024.1 RefSeq gene 76480 77373 . + . ID=gene-IY40_RS15375;Name=IY40_RS15375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS15375;old_locus_tag=IY40_15650 NZ_JPQY01000024.1 Protein Homology CDS 76480 77373 . + 0 ID=cds-WP_025302685.1;Parent=gene-IY40_RS15375;Dbxref=GenBank:WP_025302685.1;Name=WP_025302685.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210598.1;locus_tag=IY40_RS15375;product=helix-turn-helix domain-containing protein;protein_id=WP_025302685.1;transl_table=11 NZ_JPQY01000024.1 RefSeq pseudogene 77407 77622 . - . ID=gene-IY40_RS15380;Name=IY40_RS15380;end_range=77622,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IY40_RS15380;partial=true;pseudo=true NZ_JPQY01000024.1 Protein Homology CDS 77407 77622 . - 0 ID=cds-IY40_RS15380;Parent=gene-IY40_RS15380;Note=part of membrane-bound complex thought to be involved in electron transport to nitrogen%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=77622,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012144970.1;locus_tag=IY40_RS15380;partial=true;product=electron transport complex subunit RsxC;pseudo=true;transl_table=11 ##sequence-region NZ_JPQY01000025.1 1 91737 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=615 NZ_JPQY01000025.1 RefSeq region 1 91737 . + . ID=NZ_JPQY01000025.1:1..91737;Dbxref=taxon:615;collected-by=Mahloro H. Serepa%3B Vincent M. Gray;collection-date=2013-04-11;country=South Africa: North West Province;gbkey=Src;genome=genomic;identified-by=Mahloro H. Serepa%3B Vincent M. Gray;isolation-source=entomopathogenic nematode Oscheius sp. MCB living in soil;mol_type=genomic DNA;nat-host=Oscheius sp. MCB;strain=MCB NZ_JPQY01000025.1 RefSeq gene 361 2001 . - . ID=gene-IY40_RS15385;Name=IY40_RS15385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS15385;old_locus_tag=IY40_15665 NZ_JPQY01000025.1 Protein Homology CDS 361 2001 . - 0 ID=cds-WP_025304194.1;Parent=gene-IY40_RS15385;Dbxref=GenBank:WP_025304194.1;Name=WP_025304194.1;Ontology_term=GO:0030976;gbkey=CDS;go_function=thiamine pyrophosphate binding|0030976||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004867440.1;locus_tag=IY40_RS15385;product=thiamine pyrophosphate-binding protein;protein_id=WP_025304194.1;transl_table=11 NZ_JPQY01000025.1 RefSeq gene 2054 3523 . - . ID=gene-IY40_RS15390;Name=IY40_RS15390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS15390;old_locus_tag=IY40_15670 NZ_JPQY01000025.1 Protein Homology CDS 2054 3523 . - 0 ID=cds-WP_043141239.1;Parent=gene-IY40_RS15390;Dbxref=GenBank:WP_043141239.1;Name=WP_043141239.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012146659.1;locus_tag=IY40_RS15390;product=aldehyde dehydrogenase;protein_id=WP_043141239.1;transl_table=11 NZ_JPQY01000025.1 RefSeq gene 3540 4334 . - . ID=gene-IY40_RS15395;Name=IY40_RS15395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS15395;old_locus_tag=IY40_15675 NZ_JPQY01000025.1 Protein Homology CDS 3540 4334 . - 0 ID=cds-WP_043141242.1;Parent=gene-IY40_RS15395;Dbxref=GenBank:WP_043141242.1;Name=WP_043141242.1;Ontology_term=GO:0009435,GO:0033735;gbkey=CDS;go_function=aspartate dehydrogenase [NAD(P)+] activity|0033735||IEA;go_process=NAD+ biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016930042.1;locus_tag=IY40_RS15395;product=aspartate dehydrogenase;protein_id=WP_043141242.1;transl_table=11 NZ_JPQY01000025.1 RefSeq gene 4350 5144 . - . ID=gene-IY40_RS15400;Name=IY40_RS15400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS15400;old_locus_tag=IY40_15680 NZ_JPQY01000025.1 Protein Homology CDS 4350 5144 . - 0 ID=cds-WP_043141245.1;Parent=gene-IY40_RS15400;Dbxref=GenBank:WP_043141245.1;Name=WP_043141245.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228729.1;locus_tag=IY40_RS15400;product=SDR family oxidoreductase;protein_id=WP_043141245.1;transl_table=11 NZ_JPQY01000025.1 RefSeq gene 5141 5959 . - . ID=gene-IY40_RS15405;Name=IY40_RS15405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS15405;old_locus_tag=IY40_15685 NZ_JPQY01000025.1 Protein Homology CDS 5141 5959 . - 0 ID=cds-WP_043141248.1;Parent=gene-IY40_RS15405;Dbxref=GenBank:WP_043141248.1;Name=WP_043141248.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015379008.1;locus_tag=IY40_RS15405;product=alpha/beta fold hydrolase;protein_id=WP_043141248.1;transl_table=11 NZ_JPQY01000025.1 RefSeq gene 5959 6483 . - . ID=gene-IY40_RS15410;Name=IY40_RS15410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS15410;old_locus_tag=IY40_15690 NZ_JPQY01000025.1 Protein Homology CDS 5959 6483 . - 0 ID=cds-WP_004937634.1;Parent=gene-IY40_RS15410;Dbxref=GenBank:WP_004937634.1;Name=WP_004937634.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006321024.1;locus_tag=IY40_RS15410;product=cupin domain-containing protein;protein_id=WP_004937634.1;transl_table=11 NZ_JPQY01000025.1 RefSeq gene 6652 7908 . - . ID=gene-IY40_RS15415;Name=IY40_RS15415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS15415;old_locus_tag=IY40_15695 NZ_JPQY01000025.1 Protein Homology CDS 6652 7908 . - 0 ID=cds-WP_043141251.1;Parent=gene-IY40_RS15415;Dbxref=GenBank:WP_043141251.1;Name=WP_043141251.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012146664.1;locus_tag=IY40_RS15415;product=MFS transporter;protein_id=WP_043141251.1;transl_table=11 NZ_JPQY01000025.1 RefSeq gene 7932 9143 . - . ID=gene-IY40_RS15420;Name=IY40_RS15420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS15420;old_locus_tag=IY40_15700 NZ_JPQY01000025.1 Protein Homology CDS 7932 9143 . - 0 ID=cds-WP_043141255.1;Parent=gene-IY40_RS15420;Dbxref=GenBank:WP_043141255.1;Name=WP_043141255.1;Ontology_term=GO:0000166,GO:0016491;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013814436.1;locus_tag=IY40_RS15420;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_043141255.1;transl_table=11 NZ_JPQY01000025.1 RefSeq gene 9140 10081 . - . ID=gene-IY40_RS15425;Name=IY40_RS15425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS15425;old_locus_tag=IY40_15705 NZ_JPQY01000025.1 Protein Homology CDS 9140 10081 . - 0 ID=cds-WP_043141258.1;Parent=gene-IY40_RS15425;Dbxref=GenBank:WP_043141258.1;Name=WP_043141258.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003860055.1;locus_tag=IY40_RS15425;product=VOC family protein;protein_id=WP_043141258.1;transl_table=11 NZ_JPQY01000025.1 RefSeq gene 10191 10985 . - . ID=gene-IY40_RS15430;Name=IY40_RS15430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS15430;old_locus_tag=IY40_15710 NZ_JPQY01000025.1 Protein Homology CDS 10191 10985 . - 0 ID=cds-WP_025304202.1;Parent=gene-IY40_RS15430;Dbxref=GenBank:WP_025304202.1;Name=WP_025304202.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013814438.1;locus_tag=IY40_RS15430;product=IclR family transcriptional regulator;protein_id=WP_025304202.1;transl_table=11 NZ_JPQY01000025.1 RefSeq gene 11023 11778 . - . ID=gene-IY40_RS15435;Name=IY40_RS15435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS15435;old_locus_tag=IY40_15715 NZ_JPQY01000025.1 Protein Homology CDS 11023 11778 . - 0 ID=cds-WP_025304203.1;Parent=gene-IY40_RS15435;Dbxref=GenBank:WP_025304203.1;Name=WP_025304203.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228736.1;locus_tag=IY40_RS15435;product=SDR family oxidoreductase;protein_id=WP_025304203.1;transl_table=11 NZ_JPQY01000025.1 RefSeq gene 11775 12818 . - . ID=gene-IY40_RS15440;Name=IY40_RS15440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS15440;old_locus_tag=IY40_15720 NZ_JPQY01000025.1 Protein Homology CDS 11775 12818 . - 0 ID=cds-WP_043141261.1;Parent=gene-IY40_RS15440;Dbxref=GenBank:WP_043141261.1;Name=WP_043141261.1;Ontology_term=GO:0051537;gbkey=CDS;go_function=2 iron%2C 2 sulfur cluster binding|0051537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012146669.1;locus_tag=IY40_RS15440;product=aromatic ring-hydroxylating oxygenase subunit alpha;protein_id=WP_043141261.1;transl_table=11 NZ_JPQY01000025.1 RefSeq gene 12839 13147 . - . ID=gene-IY40_RS15445;Name=IY40_RS15445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS15445;old_locus_tag=IY40_15725 NZ_JPQY01000025.1 Protein Homology CDS 12839 13147 . - 0 ID=cds-WP_004937617.1;Parent=gene-IY40_RS15445;Dbxref=GenBank:WP_004937617.1;Name=WP_004937617.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012146670.1;locus_tag=IY40_RS15445;product=recombinase-like helix-turn-helix domain-containing protein;protein_id=WP_004937617.1;transl_table=11 NZ_JPQY01000025.1 RefSeq gene 13150 13467 . - . ID=gene-IY40_RS15450;Name=IY40_RS15450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS15450;old_locus_tag=IY40_15730 NZ_JPQY01000025.1 Protein Homology CDS 13150 13467 . - 0 ID=cds-WP_004937614.1;Parent=gene-IY40_RS15450;Dbxref=GenBank:WP_004937614.1;Name=WP_004937614.1;Ontology_term=GO:0009056,GO:0046872,GO:0051537;gbkey=CDS;go_function=metal ion binding|0046872||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;go_process=catabolic process|0009056||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012146671.1;locus_tag=IY40_RS15450;product=non-heme iron oxygenase ferredoxin subunit;protein_id=WP_004937614.1;transl_table=11 NZ_JPQY01000025.1 RefSeq gene 13866 15107 . + . ID=gene-IY40_RS15455;Name=IY40_RS15455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS15455;old_locus_tag=IY40_15735 NZ_JPQY01000025.1 Protein Homology CDS 13866 15107 . + 0 ID=cds-WP_043141266.1;Parent=gene-IY40_RS15455;Dbxref=GenBank:WP_043141266.1;Name=WP_043141266.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015379014.1;locus_tag=IY40_RS15455;product=MFS transporter;protein_id=WP_043141266.1;transl_table=11 NZ_JPQY01000025.1 RefSeq gene 15217 15369 . - . ID=gene-IY40_RS15460;Name=IY40_RS15460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS15460;old_locus_tag=IY40_15740 NZ_JPQY01000025.1 Protein Homology CDS 15217 15369 . - 0 ID=cds-WP_043141361.1;Parent=gene-IY40_RS15460;Dbxref=GenBank:WP_043141361.1;Name=WP_043141361.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013814445.1;locus_tag=IY40_RS15460;product=Hok/Gef family protein;protein_id=WP_043141361.1;transl_table=11 NZ_JPQY01000025.1 RefSeq gene 15705 16625 . - . ID=gene-IY40_RS15465;Name=speB;gbkey=Gene;gene=speB;gene_biotype=protein_coding;locus_tag=IY40_RS15465;old_locus_tag=IY40_15745 NZ_JPQY01000025.1 Protein Homology CDS 15705 16625 . - 0 ID=cds-WP_004937606.1;Parent=gene-IY40_RS15465;Dbxref=GenBank:WP_004937606.1;Name=WP_004937606.1;Ontology_term=GO:0008295,GO:0008783;gbkey=CDS;gene=speB;go_function=agmatinase activity|0008783||IEA;go_process=spermidine biosynthetic process|0008295||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004947828.1;locus_tag=IY40_RS15465;product=agmatinase;protein_id=WP_004937606.1;transl_table=11 NZ_JPQY01000025.1 RefSeq gene 16820 18796 . - . ID=gene-IY40_RS15470;Name=speA;gbkey=Gene;gene=speA;gene_biotype=protein_coding;locus_tag=IY40_RS15470;old_locus_tag=IY40_15750 NZ_JPQY01000025.1 Protein Homology CDS 16820 18796 . - 0 ID=cds-WP_004937600.1;Parent=gene-IY40_RS15470;Dbxref=GenBank:WP_004937600.1;Name=WP_004937600.1;Ontology_term=GO:0006527,GO:0008792;gbkey=CDS;gene=speA;go_function=arginine decarboxylase activity|0008792||IEA;go_process=L-arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019082398.1;locus_tag=IY40_RS15470;product=biosynthetic arginine decarboxylase;protein_id=WP_004937600.1;transl_table=11 NZ_JPQY01000025.1 RefSeq gene 19695 20849 . + . ID=gene-IY40_RS15475;Name=metK;gbkey=Gene;gene=metK;gene_biotype=protein_coding;locus_tag=IY40_RS15475;old_locus_tag=IY40_15755 NZ_JPQY01000025.1 Protein Homology CDS 19695 20849 . + 0 ID=cds-WP_016926681.1;Parent=gene-IY40_RS15475;Dbxref=GenBank:WP_016926681.1;Name=WP_016926681.1;Ontology_term=GO:0006556,GO:0004478,GO:0005524;gbkey=CDS;gene=metK;go_function=methionine adenosyltransferase activity|0004478||IEA,ATP binding|0005524||IEA;go_process=S-adenosylmethionine biosynthetic process|0006556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123306.1;locus_tag=IY40_RS15475;product=methionine adenosyltransferase;protein_id=WP_016926681.1;transl_table=11 NZ_JPQY01000025.1 RefSeq gene 20973 21125 . - . ID=gene-IY40_RS15480;Name=IY40_RS15480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS15480;old_locus_tag=IY40_15760 NZ_JPQY01000025.1 Protein Homology CDS 20973 21125 . - 0 ID=cds-WP_004937610.1;Parent=gene-IY40_RS15480;Dbxref=GenBank:WP_004937610.1;Name=WP_004937610.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013814445.1;locus_tag=IY40_RS15480;product=Hok/Gef family protein;protein_id=WP_004937610.1;transl_table=11 NZ_JPQY01000025.1 RefSeq gene 21431 23419 . - . ID=gene-IY40_RS15485;Name=fhuB;gbkey=Gene;gene=fhuB;gene_biotype=protein_coding;locus_tag=IY40_RS15485;old_locus_tag=IY40_15765 NZ_JPQY01000025.1 Protein Homology CDS 21431 23419 . - 0 ID=cds-WP_025304214.1;Parent=gene-IY40_RS15485;Dbxref=GenBank:WP_025304214.1;Name=WP_025304214.1;gbkey=CDS;gene=fhuB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016930052.1;locus_tag=IY40_RS15485;product=Fe(3+)-hydroxamate ABC transporter permease FhuB;protein_id=WP_025304214.1;transl_table=11 NZ_JPQY01000025.1 RefSeq gene 23416 24324 . - . ID=gene-IY40_RS15490;Name=fhuD;gbkey=Gene;gene=fhuD;gene_biotype=protein_coding;locus_tag=IY40_RS15490;old_locus_tag=IY40_15770 NZ_JPQY01000025.1 Protein Homology CDS 23416 24324 . - 0 ID=cds-WP_043141273.1;Parent=gene-IY40_RS15490;Dbxref=GenBank:WP_043141273.1;Name=WP_043141273.1;gbkey=CDS;gene=fhuD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015379018.1;locus_tag=IY40_RS15490;product=Fe(3+)-hydroxamate ABC transporter substrate-binding protein FhuD;protein_id=WP_043141273.1;transl_table=11 NZ_JPQY01000025.1 RefSeq gene 24324 25121 . - . ID=gene-IY40_RS15495;Name=fhuC;gbkey=Gene;gene=fhuC;gene_biotype=protein_coding;locus_tag=IY40_RS15495;old_locus_tag=IY40_15775 NZ_JPQY01000025.1 Protein Homology CDS 24324 25121 . - 0 ID=cds-WP_043141275.1;Parent=gene-IY40_RS15495;Dbxref=GenBank:WP_043141275.1;Name=WP_043141275.1;Ontology_term=GO:0005524;gbkey=CDS;gene=fhuC;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004386154.1;locus_tag=IY40_RS15495;product=Fe3+-hydroxamate ABC transporter ATP-binding protein FhuC;protein_id=WP_043141275.1;transl_table=11 NZ_JPQY01000025.1 RefSeq gene 25169 27361 . - . ID=gene-IY40_RS15500;Name=fhuA;gbkey=Gene;gene=fhuA;gene_biotype=protein_coding;locus_tag=IY40_RS15500;old_locus_tag=IY40_15780 NZ_JPQY01000025.1 Protein Homology CDS 25169 27361 . - 0 ID=cds-WP_043141280.1;Parent=gene-IY40_RS15500;Dbxref=GenBank:WP_043141280.1;Name=WP_043141280.1;Ontology_term=GO:0015891,GO:0015344,GO:0038023,GO:0009279;gbkey=CDS;gene=fhuA;go_component=cell outer membrane|0009279||IEA;go_function=siderophore uptake transmembrane transporter activity|0015344||IEA,signaling receptor activity|0038023||IEA;go_process=siderophore transport|0015891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013814448.1;locus_tag=IY40_RS15500;product=ferrichrome porin FhuA;protein_id=WP_043141280.1;transl_table=11 NZ_JPQY01000025.1 RefSeq gene 27612 30104 . - . ID=gene-IY40_RS15505;Name=mrcB;gbkey=Gene;gene=mrcB;gene_biotype=protein_coding;locus_tag=IY40_RS15505;old_locus_tag=IY40_15785 NZ_JPQY01000025.1 Protein Homology CDS 27612 30104 . - 0 ID=cds-WP_025304218.1;Parent=gene-IY40_RS15505;Dbxref=GenBank:WP_025304218.1;Name=WP_025304218.1;Ontology_term=GO:0009252,GO:0046677,GO:0008658,GO:0008955,GO:0009274;gbkey=CDS;gene=mrcB;go_component=peptidoglycan-based cell wall|0009274||IEA;go_function=penicillin binding|0008658||IEA,peptidoglycan glycosyltransferase activity|0008955||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,response to antibiotic|0046677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015379021.1;locus_tag=IY40_RS15505;product=bifunctional glycosyl transferase/transpeptidase;protein_id=WP_025304218.1;transl_table=11 NZ_JPQY01000025.1 RefSeq gene 30223 32661 . - . ID=gene-IY40_RS15510;Name=hrpB;gbkey=Gene;gene=hrpB;gene_biotype=protein_coding;locus_tag=IY40_RS15510;old_locus_tag=IY40_15790 NZ_JPQY01000025.1 Protein Homology CDS 30223 32661 . - 0 ID=cds-WP_200877949.1;Parent=gene-IY40_RS15510;Dbxref=GenBank:WP_200877949.1;Name=WP_200877949.1;Ontology_term=GO:0004386,GO:0005524;gbkey=CDS;gene=hrpB;go_function=helicase activity|0004386||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020453957.1;locus_tag=IY40_RS15510;product=ATP-dependent helicase HrpB;protein_id=WP_200877949.1;transl_table=11 NZ_JPQY01000025.1 RefSeq gene 32851 33393 . + . ID=gene-IY40_RS15515;Name=thpR;gbkey=Gene;gene=thpR;gene_biotype=protein_coding;locus_tag=IY40_RS15515;old_locus_tag=IY40_15795 NZ_JPQY01000025.1 Protein Homology CDS 32851 33393 . + 0 ID=cds-WP_043141288.1;Parent=gene-IY40_RS15515;Dbxref=GenBank:WP_043141288.1;Name=WP_043141288.1;Ontology_term=GO:0004113,GO:0008664;gbkey=CDS;gene=thpR;go_function=2'%2C3'-cyclic-nucleotide 3'-phosphodiesterase activity|0004113||IEA,RNA 2'%2C3'-cyclic 3'-phosphodiesterase activity|0008664||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016930058.1;locus_tag=IY40_RS15515;product=RNA 2'%2C3'-cyclic phosphodiesterase;protein_id=WP_043141288.1;transl_table=11 NZ_JPQY01000025.1 RefSeq gene 33390 34097 . + . ID=gene-IY40_RS15520;Name=sfsA;gbkey=Gene;gene=sfsA;gene_biotype=protein_coding;locus_tag=IY40_RS15520;old_locus_tag=IY40_15800 NZ_JPQY01000025.1 Protein Homology CDS 33390 34097 . + 0 ID=cds-WP_043141293.1;Parent=gene-IY40_RS15520;Dbxref=GenBank:WP_043141293.1;Name=WP_043141293.1;Ontology_term=GO:0003677;gbkey=CDS;gene=sfsA;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013814452.1;locus_tag=IY40_RS15520;product=DNA/RNA nuclease SfsA;protein_id=WP_043141293.1;transl_table=11 NZ_JPQY01000025.1 RefSeq gene 34281 34736 . + . ID=gene-IY40_RS15525;Name=dksA;gbkey=Gene;gene=dksA;gene_biotype=protein_coding;locus_tag=IY40_RS15525;old_locus_tag=IY40_15805 NZ_JPQY01000025.1 Protein Homology CDS 34281 34736 . + 0 ID=cds-WP_004937569.1;Parent=gene-IY40_RS15525;Dbxref=GenBank:WP_004937569.1;Name=WP_004937569.1;gbkey=CDS;gene=dksA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209354.1;locus_tag=IY40_RS15525;product=RNA polymerase-binding protein DksA;protein_id=WP_004937569.1;transl_table=11 NZ_JPQY01000025.1 RefSeq gene 34809 35720 . + . ID=gene-IY40_RS15530;Name=gluQRS;gbkey=Gene;gene=gluQRS;gene_biotype=protein_coding;locus_tag=IY40_RS15530;old_locus_tag=IY40_15810 NZ_JPQY01000025.1 Protein Homology CDS 34809 35720 . + 0 ID=cds-WP_025304222.1;Parent=gene-IY40_RS15530;Dbxref=GenBank:WP_025304222.1;Name=WP_025304222.1;Ontology_term=GO:0006400,GO:0043039,GO:0000166,GO:0004812,GO:0005524;gbkey=CDS;gene=gluQRS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,ATP binding|0005524||IEA;go_process=tRNA modification|0006400||IEA,tRNA aminoacylation|0043039||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016930059.1;locus_tag=IY40_RS15530;product=tRNA glutamyl-Q(34) synthetase GluQRS;protein_id=WP_025304222.1;transl_table=11 NZ_JPQY01000025.1 RefSeq gene 35782 37329 . + . ID=gene-IY40_RS15535;Name=pcnB;gbkey=Gene;gene=pcnB;gene_biotype=protein_coding;locus_tag=IY40_RS15535;old_locus_tag=IY40_15815 NZ_JPQY01000025.1 Protein Homology CDS 35782 37329 . + 0 ID=cds-WP_071826146.1;Parent=gene-IY40_RS15535;Dbxref=GenBank:WP_071826146.1;Name=WP_071826146.1;Ontology_term=GO:0003723,GO:1990817;gbkey=CDS;gene=pcnB;go_function=RNA binding|0003723||IEA,poly(A) RNA polymerase activity|1990817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013319046.1;locus_tag=IY40_RS15535;product=polynucleotide adenylyltransferase PcnB;protein_id=WP_071826146.1;transl_table=11 NZ_JPQY01000025.1 RefSeq gene 37329 37829 . + . ID=gene-IY40_RS15540;Name=folK;gbkey=Gene;gene=folK;gene_biotype=protein_coding;locus_tag=IY40_RS15540;old_locus_tag=IY40_15820 NZ_JPQY01000025.1 Protein Homology CDS 37329 37829 . + 0 ID=cds-WP_043141296.1;Parent=gene-IY40_RS15540;Dbxref=GenBank:WP_043141296.1;Name=WP_043141296.1;Ontology_term=GO:0009396,GO:0003848;gbkey=CDS;gene=folK;go_function=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity|0003848||IEA;go_process=folic acid-containing compound biosynthetic process|0009396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004937558.1;locus_tag=IY40_RS15540;product=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase;protein_id=WP_043141296.1;transl_table=11 NZ_JPQY01000025.1 RefSeq gene 37835 39193 . - . ID=gene-IY40_RS15545;Name=qseC;gbkey=Gene;gene=qseC;gene_biotype=protein_coding;locus_tag=IY40_RS15545;old_locus_tag=IY40_15825 NZ_JPQY01000025.1 Protein Homology CDS 37835 39193 . - 0 ID=cds-WP_043141299.1;Parent=gene-IY40_RS15545;Dbxref=GenBank:WP_043141299.1;Name=WP_043141299.1;Ontology_term=GO:0007165,GO:0000155;gbkey=CDS;gene=qseC;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016930061.1;locus_tag=IY40_RS15545;product=quorum sensing histidine kinase QseC;protein_id=WP_043141299.1;transl_table=11 NZ_JPQY01000025.1 RefSeq gene 39190 39852 . - . ID=gene-IY40_RS15550;Name=qseB;gbkey=Gene;gene=qseB;gene_biotype=protein_coding;locus_tag=IY40_RS15550;old_locus_tag=IY40_15830 NZ_JPQY01000025.1 Protein Homology CDS 39190 39852 . - 0 ID=cds-WP_004937550.1;Parent=gene-IY40_RS15550;Dbxref=GenBank:WP_004937550.1;Name=WP_004937550.1;gbkey=CDS;gene=qseB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015379027.1;locus_tag=IY40_RS15550;product=quorum sensing response regulator transcription factor QseB;protein_id=WP_004937550.1;transl_table=11 NZ_JPQY01000025.1 RefSeq gene 40019 40813 . + . ID=gene-IY40_RS15555;Name=panB;gbkey=Gene;gene=panB;gene_biotype=protein_coding;locus_tag=IY40_RS15555;old_locus_tag=IY40_15835 NZ_JPQY01000025.1 Protein Homology CDS 40019 40813 . + 0 ID=cds-WP_043141302.1;Parent=gene-IY40_RS15555;Dbxref=GenBank:WP_043141302.1;Name=WP_043141302.1;Ontology_term=GO:0015940,GO:0003864;gbkey=CDS;gene=panB;go_function=3-methyl-2-oxobutanoate hydroxymethyltransferase activity|0003864||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011094836.1;locus_tag=IY40_RS15555;product=3-methyl-2-oxobutanoate hydroxymethyltransferase;protein_id=WP_043141302.1;transl_table=11 NZ_JPQY01000025.1 RefSeq gene 40837 41691 . + . ID=gene-IY40_RS15560;Name=panC;gbkey=Gene;gene=panC;gene_biotype=protein_coding;locus_tag=IY40_RS15560;old_locus_tag=IY40_15840 NZ_JPQY01000025.1 Protein Homology CDS 40837 41691 . + 0 ID=cds-WP_043141305.1;Parent=gene-IY40_RS15560;Dbxref=GenBank:WP_043141305.1;Name=WP_043141305.1;Ontology_term=GO:0015940,GO:0004592;gbkey=CDS;gene=panC;go_function=pantoate-beta-alanine ligase activity|0004592||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019456066.1;locus_tag=IY40_RS15560;product=pantoate--beta-alanine ligase;protein_id=WP_043141305.1;transl_table=11 NZ_JPQY01000025.1 RefSeq gene 41837 42217 . + . ID=gene-IY40_RS15565;Name=panD;gbkey=Gene;gene=panD;gene_biotype=protein_coding;locus_tag=IY40_RS15565;old_locus_tag=IY40_15845 NZ_JPQY01000025.1 Protein Homology CDS 41837 42217 . + 0 ID=cds-WP_004937544.1;Parent=gene-IY40_RS15565;Dbxref=GenBank:WP_004937544.1;Name=WP_004937544.1;Ontology_term=GO:0006523,GO:0004068;gbkey=CDS;gene=panD;go_function=aspartate 1-decarboxylase activity|0004068||IEA;go_process=alanine biosynthetic process|0006523||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015673742.1;locus_tag=IY40_RS15565;product=aspartate 1-decarboxylase;protein_id=WP_004937544.1;transl_table=11 NZ_JPQY01000025.1 RefSeq gene 42252 43532 . - . ID=gene-IY40_RS15570;Name=IY40_RS15570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS15570;old_locus_tag=IY40_15850 NZ_JPQY01000025.1 Protein Homology CDS 42252 43532 . - 0 ID=cds-WP_025304228.1;Parent=gene-IY40_RS15570;Dbxref=GenBank:WP_025304228.1;Name=WP_025304228.1;Ontology_term=GO:0005975,GO:0016810;gbkey=CDS;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015379029.1;locus_tag=IY40_RS15570;product=polysaccharide deacetylase family protein;protein_id=WP_025304228.1;transl_table=11 NZ_JPQY01000025.1 RefSeq gene 43710 44480 . - . ID=gene-IY40_RS15575;Name=IY40_RS15575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS15575;old_locus_tag=IY40_15855 NZ_JPQY01000025.1 Protein Homology CDS 43710 44480 . - 0 ID=cds-WP_004937535.1;Parent=gene-IY40_RS15575;Dbxref=GenBank:WP_004937535.1;Name=WP_004937535.1;Ontology_term=GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013200815.1;locus_tag=IY40_RS15575;product=ABC transporter permease;protein_id=WP_004937535.1;transl_table=11 NZ_JPQY01000025.1 RefSeq gene 44477 45400 . - . ID=gene-IY40_RS15580;Name=IY40_RS15580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS15580;old_locus_tag=IY40_15860 NZ_JPQY01000025.1 Protein Homology CDS 44477 45400 . - 0 ID=cds-WP_015379030.1;Parent=gene-IY40_RS15580;Dbxref=GenBank:WP_015379030.1;Name=WP_015379030.1;Ontology_term=GO:0005524,GO:0016887,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019080482.1;locus_tag=IY40_RS15580;product=ABC transporter ATP-binding protein;protein_id=WP_015379030.1;transl_table=11 NZ_JPQY01000025.1 RefSeq gene 45611 46267 . + . ID=gene-IY40_RS15585;Name=can;gbkey=Gene;gene=can;gene_biotype=protein_coding;locus_tag=IY40_RS15585;old_locus_tag=IY40_15865 NZ_JPQY01000025.1 Protein Homology CDS 45611 46267 . + 0 ID=cds-WP_016930066.1;Parent=gene-IY40_RS15585;Dbxref=GenBank:WP_016930066.1;Name=WP_016930066.1;Ontology_term=GO:0015976,GO:0004089,GO:0008270;gbkey=CDS;gene=can;go_function=carbonate dehydratase activity|0004089||IEA,zinc ion binding|0008270||IEA;go_process=carbon utilization|0015976||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015379031.1;locus_tag=IY40_RS15585;product=carbonate dehydratase;protein_id=WP_016930066.1;transl_table=11 NZ_JPQY01000025.1 RefSeq gene 46306 46842 . - . ID=gene-IY40_RS15590;Name=hpt;gbkey=Gene;gene=hpt;gene_biotype=protein_coding;locus_tag=IY40_RS15590;old_locus_tag=IY40_15870 NZ_JPQY01000025.1 Protein Homology CDS 46306 46842 . - 0 ID=cds-WP_048234659.1;Parent=gene-IY40_RS15590;Dbxref=GenBank:WP_048234659.1;Name=WP_048234659.1;Ontology_term=GO:0006166;gbkey=CDS;gene=hpt;go_process=purine ribonucleoside salvage|0006166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459175.1;locus_tag=IY40_RS15590;product=hypoxanthine phosphoribosyltransferase;protein_id=WP_048234659.1;transl_table=11 NZ_JPQY01000025.1 RefSeq gene 46941 48584 . - . ID=gene-IY40_RS15595;Name=cueO;gbkey=Gene;gene=cueO;gene_biotype=protein_coding;locus_tag=IY40_RS15595;old_locus_tag=IY40_15875 NZ_JPQY01000025.1 Protein Homology CDS 46941 48584 . - 0 ID=cds-WP_025304229.1;Parent=gene-IY40_RS15595;Dbxref=GenBank:WP_025304229.1;Name=WP_025304229.1;Ontology_term=GO:0005507,GO:0016491;gbkey=CDS;gene=cueO;go_function=copper ion binding|0005507||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004937518.1;locus_tag=IY40_RS15595;product=multicopper oxidase CueO;protein_id=WP_025304229.1;transl_table=11 NZ_JPQY01000025.1 RefSeq gene 48802 49149 . + . ID=gene-IY40_RS15600;Name=IY40_RS15600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS15600;old_locus_tag=IY40_15880 NZ_JPQY01000025.1 Protein Homology CDS 48802 49149 . + 0 ID=cds-WP_004937515.1;Parent=gene-IY40_RS15600;Dbxref=GenBank:WP_004937515.1;Name=WP_004937515.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002228215.1;locus_tag=IY40_RS15600;product=YacC family pilotin-like protein;protein_id=WP_004937515.1;transl_table=11 NZ_JPQY01000025.1 RefSeq gene 49275 50138 . + . ID=gene-IY40_RS15605;Name=speE;gbkey=Gene;gene=speE;gene_biotype=protein_coding;locus_tag=IY40_RS15605;old_locus_tag=IY40_15885 NZ_JPQY01000025.1 Protein Homology CDS 49275 50138 . + 0 ID=cds-WP_043141308.1;Parent=gene-IY40_RS15605;Dbxref=GenBank:WP_043141308.1;Name=WP_043141308.1;gbkey=CDS;gene=speE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005156787.1;locus_tag=IY40_RS15605;product=polyamine aminopropyltransferase;protein_id=WP_043141308.1;transl_table=11 NZ_JPQY01000025.1 RefSeq gene 50166 50960 . + . ID=gene-IY40_RS15610;Name=speD;gbkey=Gene;gene=speD;gene_biotype=protein_coding;locus_tag=IY40_RS15610;old_locus_tag=IY40_15890 NZ_JPQY01000025.1 Protein Homology CDS 50166 50960 . + 0 ID=cds-WP_004937510.1;Parent=gene-IY40_RS15610;Dbxref=GenBank:WP_004937510.1;Name=WP_004937510.1;Ontology_term=GO:0008295,GO:0004014;gbkey=CDS;gene=speD;go_function=adenosylmethionine decarboxylase activity|0004014||IEA;go_process=spermidine biosynthetic process|0008295||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012146704.1;locus_tag=IY40_RS15610;product=adenosylmethionine decarboxylase;protein_id=WP_004937510.1;transl_table=11 NZ_JPQY01000025.1 RefSeq gene 50993 51355 . - . ID=gene-IY40_RS15615;Name=yacL;gbkey=Gene;gene=yacL;gene_biotype=protein_coding;locus_tag=IY40_RS15615;old_locus_tag=IY40_15895 NZ_JPQY01000025.1 Protein Homology CDS 50993 51355 . - 0 ID=cds-WP_004937507.1;Parent=gene-IY40_RS15615;Dbxref=GenBank:WP_004937507.1;Name=WP_004937507.1;gbkey=CDS;gene=yacL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004937507.1;locus_tag=IY40_RS15615;product=protein YacL;protein_id=WP_004937507.1;transl_table=11 NZ_JPQY01000025.1 RefSeq gene 51495 54092 . - . ID=gene-IY40_RS15620;Name=acnB;gbkey=Gene;gene=acnB;gene_biotype=protein_coding;locus_tag=IY40_RS15620;old_locus_tag=IY40_15900 NZ_JPQY01000025.1 Protein Homology CDS 51495 54092 . - 0 ID=cds-WP_043141310.1;Parent=gene-IY40_RS15620;Dbxref=GenBank:WP_043141310.1;Name=WP_043141310.1;Ontology_term=GO:0006099,GO:0003994,GO:0051539,GO:0005829;gbkey=CDS;gene=acnB;go_component=cytosol|0005829||IEA;go_function=aconitate hydratase activity|0003994||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019080489.1;locus_tag=IY40_RS15620;product=bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase;protein_id=WP_043141310.1;transl_table=11 NZ_JPQY01000025.1 RefSeq gene 54608 56032 . - . ID=gene-IY40_RS15625;Name=lpdA;gbkey=Gene;gene=lpdA;gene_biotype=protein_coding;locus_tag=IY40_RS15625;old_locus_tag=IY40_15905 NZ_JPQY01000025.1 Protein Homology CDS 54608 56032 . - 0 ID=cds-WP_004937500.1;Parent=gene-IY40_RS15625;Dbxref=GenBank:WP_004937500.1;Name=WP_004937500.1;Ontology_term=GO:0004148,GO:0050660;gbkey=CDS;gene=lpdA;go_function=dihydrolipoyl dehydrogenase (NADH) activity|0004148||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308147.1;locus_tag=IY40_RS15625;product=dihydrolipoyl dehydrogenase;protein_id=WP_004937500.1;transl_table=11 NZ_JPQY01000025.1 RefSeq gene 56266 58149 . - . ID=gene-IY40_RS15630;Name=aceF;gbkey=Gene;gene=aceF;gene_biotype=protein_coding;locus_tag=IY40_RS15630;old_locus_tag=IY40_15910 NZ_JPQY01000025.1 Protein Homology CDS 56266 58149 . - 0 ID=cds-WP_043141312.1;Parent=gene-IY40_RS15630;Dbxref=GenBank:WP_043141312.1;Name=WP_043141312.1;Ontology_term=GO:0006096,GO:0004742,GO:0045254;gbkey=CDS;gene=aceF;go_component=pyruvate dehydrogenase complex|0045254||IEA;go_function=dihydrolipoyllysine-residue acetyltransferase activity|0004742||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003018689.1;locus_tag=IY40_RS15630;product=pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase;protein_id=WP_043141312.1;transl_table=11 NZ_JPQY01000025.1 RefSeq gene 58163 60826 . - . ID=gene-IY40_RS15635;Name=aceE;gbkey=Gene;gene=aceE;gene_biotype=protein_coding;locus_tag=IY40_RS15635;old_locus_tag=IY40_15915 NZ_JPQY01000025.1 Protein Homology CDS 58163 60826 . - 0 ID=cds-WP_025304233.1;Parent=gene-IY40_RS15635;Dbxref=GenBank:WP_025304233.1;Name=WP_025304233.1;Ontology_term=GO:0006086,GO:0004739,GO:0045254;gbkey=CDS;gene=aceE;go_component=pyruvate dehydrogenase complex|0045254||IEA;go_function=pyruvate dehydrogenase (acetyl-transferring) activity|0004739||IEA;go_process=pyruvate decarboxylation to acetyl-CoA|0006086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008814576.1;locus_tag=IY40_RS15635;product=pyruvate dehydrogenase (acetyl-transferring)%2C homodimeric type;protein_id=WP_025304233.1;transl_table=11 NZ_JPQY01000025.1 RefSeq gene 60992 61756 . - . ID=gene-IY40_RS15640;Name=pdhR;gbkey=Gene;gene=pdhR;gene_biotype=protein_coding;locus_tag=IY40_RS15640;old_locus_tag=IY40_15920 NZ_JPQY01000025.1 Protein Homology CDS 60992 61756 . - 0 ID=cds-WP_004937490.1;Parent=gene-IY40_RS15640;Dbxref=GenBank:WP_004937490.1;Name=WP_004937490.1;gbkey=CDS;gene=pdhR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002216080.1;locus_tag=IY40_RS15640;product=pyruvate dehydrogenase complex transcriptional repressor PdhR;protein_id=WP_004937490.1;transl_table=11 NZ_JPQY01000025.1 RefSeq gene 62388 63764 . + . ID=gene-IY40_RS15645;Name=IY40_RS15645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS15645;old_locus_tag=IY40_15925 NZ_JPQY01000025.1 Protein Homology CDS 62388 63764 . + 0 ID=cds-WP_025304234.1;Parent=gene-IY40_RS15645;Dbxref=GenBank:WP_025304234.1;Name=WP_025304234.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015379036.1;locus_tag=IY40_RS15645;product=amino acid permease;protein_id=WP_025304234.1;transl_table=11 NZ_JPQY01000025.1 RefSeq gene 63828 65063 . - . ID=gene-IY40_RS15650;Name=IY40_RS15650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS15650;old_locus_tag=IY40_15930 NZ_JPQY01000025.1 Protein Homology CDS 63828 65063 . - 0 ID=cds-WP_043141315.1;Parent=gene-IY40_RS15650;Dbxref=GenBank:WP_043141315.1;Name=WP_043141315.1;Ontology_term=GO:0009055,GO:0020037;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016930076.1;locus_tag=IY40_RS15650;product=cytochrome c;protein_id=WP_043141315.1;transl_table=11 NZ_JPQY01000025.1 RefSeq gene 65060 65614 . - . ID=gene-IY40_RS15655;Name=IY40_RS15655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS15655;old_locus_tag=IY40_15935 NZ_JPQY01000025.1 Protein Homology CDS 65060 65614 . - 0 ID=cds-WP_025304236.1;Parent=gene-IY40_RS15655;Dbxref=GenBank:WP_025304236.1;Name=WP_025304236.1;Ontology_term=GO:0046872,GO:0051536,GO:0051537;gbkey=CDS;go_function=metal ion binding|0046872||IEA,iron-sulfur cluster binding|0051536||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004937484.1;locus_tag=IY40_RS15655;product=(2Fe-2S)-binding protein;protein_id=WP_025304236.1;transl_table=11 NZ_JPQY01000025.1 RefSeq gene 65611 68400 . - . ID=gene-IY40_RS15660;Name=IY40_RS15660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS15660;old_locus_tag=IY40_15940 NZ_JPQY01000025.1 Protein Homology CDS 65611 68400 . - 0 ID=cds-WP_043141317.1;Parent=gene-IY40_RS15660;Dbxref=GenBank:WP_043141317.1;Name=WP_043141317.1;Ontology_term=GO:0043546;gbkey=CDS;go_function=molybdopterin cofactor binding|0043546||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012146720.1;locus_tag=IY40_RS15660;product=xanthine dehydrogenase family protein molybdopterin-binding subunit;protein_id=WP_043141317.1;transl_table=11 NZ_JPQY01000025.1 RefSeq gene 68609 69193 . + . ID=gene-IY40_RS15665;Name=IY40_RS15665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS15665;old_locus_tag=IY40_15945 NZ_JPQY01000025.1 Protein Homology CDS 68609 69193 . + 0 ID=cds-WP_043141320.1;Parent=gene-IY40_RS15665;Dbxref=GenBank:WP_043141320.1;Name=WP_043141320.1;Ontology_term=GO:0016779;gbkey=CDS;go_function=nucleotidyltransferase activity|0016779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016930078.1;locus_tag=IY40_RS15665;product=nucleotidyltransferase family protein;protein_id=WP_043141320.1;transl_table=11 NZ_JPQY01000025.1 RefSeq gene 69202 70254 . + . ID=gene-IY40_RS15670;Name=IY40_RS15670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS15670;old_locus_tag=IY40_15950 NZ_JPQY01000025.1 Protein Homology CDS 69202 70254 . + 0 ID=cds-WP_043141323.1;Parent=gene-IY40_RS15670;Dbxref=GenBank:WP_043141323.1;Name=WP_043141323.1;Ontology_term=GO:0070403;gbkey=CDS;go_function=NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016930079.1;locus_tag=IY40_RS15670;product=XdhC family protein;protein_id=WP_043141323.1;transl_table=11 NZ_JPQY01000025.1 RefSeq gene 70178 71044 . - . ID=gene-IY40_RS15675;Name=IY40_RS15675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS15675;old_locus_tag=IY40_15955 NZ_JPQY01000025.1 Protein Homology CDS 70178 71044 . - 0 ID=cds-WP_043141326.1;Parent=gene-IY40_RS15675;Dbxref=GenBank:WP_043141326.1;Name=WP_043141326.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004937469.1;locus_tag=IY40_RS15675;product=helix-turn-helix domain-containing protein;protein_id=WP_043141326.1;transl_table=11 NZ_JPQY01000025.1 RefSeq gene 71195 72841 . - . ID=gene-IY40_RS15680;Name=fumA;gbkey=Gene;gene=fumA;gene_biotype=protein_coding;locus_tag=IY40_RS15680;old_locus_tag=IY40_15960 NZ_JPQY01000025.1 Protein Homology CDS 71195 72841 . - 0 ID=cds-WP_043141328.1;Parent=gene-IY40_RS15680;Dbxref=GenBank:WP_043141328.1;Name=WP_043141328.1;gbkey=CDS;gene=fumA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000066594.1;locus_tag=IY40_RS15680;product=class I fumarate hydratase FumA;protein_id=WP_043141328.1;transl_table=11 NZ_JPQY01000025.1 RefSeq gene 73191 73703 . + . ID=gene-IY40_RS15685;Name=IY40_RS15685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS15685;old_locus_tag=IY40_15965 NZ_JPQY01000025.1 Protein Homology CDS 73191 73703 . + 0 ID=cds-WP_004937462.1;Parent=gene-IY40_RS15685;Dbxref=GenBank:WP_004937462.1;Name=WP_004937462.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004937462.1;locus_tag=IY40_RS15685;product=SprT family zinc-dependent metalloprotease;protein_id=WP_004937462.1;transl_table=11 NZ_JPQY01000025.1 RefSeq gene 73805 74500 . + . ID=gene-IY40_RS15690;Name=endA;gbkey=Gene;gene=endA;gene_biotype=protein_coding;locus_tag=IY40_RS15690;old_locus_tag=IY40_15970 NZ_JPQY01000025.1 Protein Homology CDS 73805 74500 . + 0 ID=cds-WP_043141331.1;Parent=gene-IY40_RS15690;Dbxref=GenBank:WP_043141331.1;Name=WP_043141331.1;Ontology_term=GO:0004518;gbkey=CDS;gene=endA;go_function=nuclease activity|0004518||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209973.1;locus_tag=IY40_RS15690;product=deoxyribonuclease I;protein_id=WP_043141331.1;transl_table=11 NZ_JPQY01000025.1 RefSeq gene 74570 75301 . + . ID=gene-IY40_RS15695;Name=rsmE;gbkey=Gene;gene=rsmE;gene_biotype=protein_coding;locus_tag=IY40_RS15695;old_locus_tag=IY40_15975 NZ_JPQY01000025.1 Protein Homology CDS 74570 75301 . + 0 ID=cds-WP_025304244.1;Parent=gene-IY40_RS15695;Dbxref=GenBank:WP_025304244.1;Name=WP_025304244.1;Ontology_term=GO:0006364,GO:0008168;gbkey=CDS;gene=rsmE;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311849.2;locus_tag=IY40_RS15695;product=16S rRNA (uracil(1498)-N(3))-methyltransferase;protein_id=WP_025304244.1;transl_table=11 NZ_JPQY01000025.1 RefSeq gene 75312 76262 . + . ID=gene-IY40_RS15700;Name=gshB;gbkey=Gene;gene=gshB;gene_biotype=protein_coding;locus_tag=IY40_RS15700;old_locus_tag=IY40_15980 NZ_JPQY01000025.1 Protein Homology CDS 75312 76262 . + 0 ID=cds-WP_043141334.1;Parent=gene-IY40_RS15700;Dbxref=GenBank:WP_043141334.1;Name=WP_043141334.1;Ontology_term=GO:0006750,GO:0004363,GO:0005524,GO:0046872;gbkey=CDS;gene=gshB;go_function=glutathione synthase activity|0004363||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=glutathione biosynthetic process|0006750||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019079014.1;locus_tag=IY40_RS15700;product=glutathione synthase;protein_id=WP_043141334.1;transl_table=11 NZ_JPQY01000025.1 RefSeq gene 76410 76973 . + . ID=gene-IY40_RS15705;Name=IY40_RS15705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS15705;old_locus_tag=IY40_15985 NZ_JPQY01000025.1 Protein Homology CDS 76410 76973 . + 0 ID=cds-WP_004937452.1;Parent=gene-IY40_RS15705;Dbxref=GenBank:WP_004937452.1;Name=WP_004937452.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012442535.1;locus_tag=IY40_RS15705;product=YqgE/AlgH family protein;protein_id=WP_004937452.1;transl_table=11 NZ_JPQY01000025.1 RefSeq gene 76973 77395 . + . ID=gene-IY40_RS15710;Name=ruvX;gbkey=Gene;gene=ruvX;gene_biotype=protein_coding;locus_tag=IY40_RS15710;old_locus_tag=IY40_15990 NZ_JPQY01000025.1 Protein Homology CDS 76973 77395 . + 0 ID=cds-WP_025304246.1;Parent=gene-IY40_RS15710;Dbxref=GenBank:WP_025304246.1;Name=WP_025304246.1;Ontology_term=GO:0006364;gbkey=CDS;gene=ruvX;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209978.1;locus_tag=IY40_RS15710;product=Holliday junction resolvase RuvX;protein_id=WP_025304246.1;transl_table=11 NZ_JPQY01000025.1 RefSeq gene 77392 78414 . - . ID=gene-IY40_RS15715;Name=IY40_RS15715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS15715;old_locus_tag=IY40_15995 NZ_JPQY01000025.1 Protein Homology CDS 77392 78414 . - 0 ID=cds-WP_043141339.1;Parent=gene-IY40_RS15715;Dbxref=GenBank:WP_043141339.1;Name=WP_043141339.1;Ontology_term=GO:0043107,GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;go_process=type IV pilus-dependent motility|0043107||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004937448.1;locus_tag=IY40_RS15715;product=type IV pilus twitching motility protein PilT;protein_id=WP_043141339.1;transl_table=11 NZ_JPQY01000025.1 RefSeq gene 78435 79142 . + . ID=gene-IY40_RS15720;Name=IY40_RS15720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS15720;old_locus_tag=IY40_16000 NZ_JPQY01000025.1 Protein Homology CDS 78435 79142 . + 0 ID=cds-WP_043141342.1;Parent=gene-IY40_RS15720;Dbxref=GenBank:WP_043141342.1;Name=WP_043141342.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004958752.1;locus_tag=IY40_RS15720;product=YggS family pyridoxal phosphate-dependent enzyme;protein_id=WP_043141342.1;transl_table=11 NZ_JPQY01000025.1 RefSeq gene 79162 79983 . + . ID=gene-IY40_RS15725;Name=proC;gbkey=Gene;gene=proC;gene_biotype=protein_coding;locus_tag=IY40_RS15725;old_locus_tag=IY40_16005 NZ_JPQY01000025.1 Protein Homology CDS 79162 79983 . + 0 ID=cds-WP_025304249.1;Parent=gene-IY40_RS15725;Dbxref=GenBank:WP_025304249.1;Name=WP_025304249.1;Ontology_term=GO:0055129,GO:0004735;gbkey=CDS;gene=proC;go_function=pyrroline-5-carboxylate reductase activity|0004735||IEA;go_process=L-proline biosynthetic process|0055129||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019456091.1;locus_tag=IY40_RS15725;product=pyrroline-5-carboxylate reductase;protein_id=WP_025304249.1;transl_table=11 NZ_JPQY01000025.1 RefSeq gene 80015 80569 . + . ID=gene-IY40_RS15730;Name=IY40_RS15730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS15730;old_locus_tag=IY40_16010 NZ_JPQY01000025.1 Protein Homology CDS 80015 80569 . + 0 ID=cds-WP_025304250.1;Parent=gene-IY40_RS15730;Dbxref=GenBank:WP_025304250.1;Name=WP_025304250.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012413935.1;locus_tag=IY40_RS15730;product=YggT family protein;protein_id=WP_025304250.1;transl_table=11 NZ_JPQY01000025.1 RefSeq gene 80566 80856 . + . ID=gene-IY40_RS15735;Name=yggU;gbkey=Gene;gene=yggU;gene_biotype=protein_coding;locus_tag=IY40_RS15735;old_locus_tag=IY40_16015 NZ_JPQY01000025.1 Protein Homology CDS 80566 80856 . + 0 ID=cds-WP_004948014.1;Parent=gene-IY40_RS15735;Dbxref=GenBank:WP_004948014.1;Name=WP_004948014.1;gbkey=CDS;gene=yggU;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005173614.1;locus_tag=IY40_RS15735;product=DUF167 family protein YggU;protein_id=WP_004948014.1;transl_table=11 NZ_JPQY01000025.1 RefSeq gene 80874 81467 . + . ID=gene-IY40_RS15740;Name=IY40_RS15740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS15740;old_locus_tag=IY40_16020 NZ_JPQY01000025.1 Protein Homology CDS 80874 81467 . + 0 ID=cds-WP_043141349.1;Parent=gene-IY40_RS15740;Dbxref=GenBank:WP_043141349.1;Name=WP_043141349.1;Ontology_term=GO:0009143,GO:0047429;gbkey=CDS;go_function=nucleoside triphosphate diphosphatase activity|0047429||IEA;go_process=nucleoside triphosphate catabolic process|0009143||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002215614.1;locus_tag=IY40_RS15740;product=XTP/dITP diphosphatase;protein_id=WP_043141349.1;transl_table=11 NZ_JPQY01000025.1 RefSeq gene 81460 82602 . + . ID=gene-IY40_RS15745;Name=hemW;gbkey=Gene;gene=hemW;gene_biotype=protein_coding;locus_tag=IY40_RS15745;old_locus_tag=IY40_16025 NZ_JPQY01000025.1 Protein Homology CDS 81460 82602 . + 0 ID=cds-WP_033635947.1;Parent=gene-IY40_RS15745;Dbxref=GenBank:WP_033635947.1;Name=WP_033635947.1;Ontology_term=GO:0006779,GO:0051539,GO:0051989,GO:0005737;gbkey=CDS;gene=hemW;go_component=cytoplasm|0005737||IEA;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,coproporphyrinogen dehydrogenase activity|0051989||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004937426.1;locus_tag=IY40_RS15745;product=radical SAM family heme chaperone HemW;protein_id=WP_033635947.1;transl_table=11 NZ_JPQY01000025.1 RefSeq gene 82640 82888 . - . ID=gene-IY40_RS15750;Name=IY40_RS15750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS15750;old_locus_tag=IY40_16030 NZ_JPQY01000025.1 Protein Homology CDS 82640 82888 . - 0 ID=cds-WP_025304253.1;Parent=gene-IY40_RS15750;Dbxref=GenBank:WP_025304253.1;Name=WP_025304253.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013814488.1;locus_tag=IY40_RS15750;product=DUF2442 domain-containing protein;protein_id=WP_025304253.1;transl_table=11 NZ_JPQY01000025.1 RefSeq gene 82872 83114 . - . ID=gene-IY40_RS15755;Name=IY40_RS15755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS15755;old_locus_tag=IY40_16035 NZ_JPQY01000025.1 Protein Homology CDS 82872 83114 . - 0 ID=cds-WP_004937418.1;Parent=gene-IY40_RS15755;Dbxref=GenBank:WP_004937418.1;Name=WP_004937418.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004937418.1;locus_tag=IY40_RS15755;product=DUF4160 domain-containing protein;protein_id=WP_004937418.1;transl_table=11 NZ_JPQY01000025.1 RefSeq gene 83210 83932 . - . ID=gene-IY40_RS15760;Name=IY40_RS15760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS15760;old_locus_tag=IY40_16040 NZ_JPQY01000025.1 Protein Homology CDS 83210 83932 . - 0 ID=cds-WP_043141352.1;Parent=gene-IY40_RS15760;Dbxref=GenBank:WP_043141352.1;Name=WP_043141352.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013814490.1;locus_tag=IY40_RS15760;product=YggN family protein;protein_id=WP_043141352.1;transl_table=11 NZ_JPQY01000025.1 RefSeq gene 83963 84886 . - . ID=gene-IY40_RS15765;Name=glsB;gbkey=Gene;gene=glsB;gene_biotype=protein_coding;locus_tag=IY40_RS15765;old_locus_tag=IY40_16045 NZ_JPQY01000025.1 Protein Homology CDS 83963 84886 . - 0 ID=cds-WP_004937414.1;Parent=gene-IY40_RS15765;Dbxref=GenBank:WP_004937414.1;Name=WP_004937414.1;Ontology_term=GO:0006541,GO:0004359;gbkey=CDS;gene=glsB;go_function=glutaminase activity|0004359||IEA;go_process=glutamine metabolic process|0006541||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012104660.1;locus_tag=IY40_RS15765;product=glutaminase B;protein_id=WP_004937414.1;transl_table=11 NZ_JPQY01000025.1 RefSeq gene 84982 85308 . - . ID=gene-IY40_RS15770;Name=IY40_RS15770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS15770;old_locus_tag=IY40_16050 NZ_JPQY01000025.1 Protein Homology CDS 84982 85308 . - 0 ID=cds-WP_004937412.1;Parent=gene-IY40_RS15770;Dbxref=GenBank:WP_004937412.1;Name=WP_004937412.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209990.1;locus_tag=IY40_RS15770;product=YggL family protein;protein_id=WP_004937412.1;transl_table=11 NZ_JPQY01000025.1 RefSeq gene 85308 86027 . - . ID=gene-IY40_RS15775;Name=trmB;gbkey=Gene;gene=trmB;gene_biotype=protein_coding;locus_tag=IY40_RS15775;old_locus_tag=IY40_16055 NZ_JPQY01000025.1 Protein Homology CDS 85308 86027 . - 0 ID=cds-WP_043141355.1;Parent=gene-IY40_RS15775;Dbxref=GenBank:WP_043141355.1;Name=WP_043141355.1;Ontology_term=GO:0006400,GO:0008176;gbkey=CDS;gene=trmB;go_function=tRNA (guanine(46)-N7)-methyltransferase activity|0008176||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004706850.1;locus_tag=IY40_RS15775;product=tRNA (guanosine(46)-N7)-methyltransferase TrmB;protein_id=WP_043141355.1;transl_table=11 NZ_JPQY01000025.1 RefSeq gene 86205 87305 . + . ID=gene-IY40_RS15780;Name=mutY;gbkey=Gene;gene=mutY;gene_biotype=protein_coding;locus_tag=IY40_RS15780;old_locus_tag=IY40_16060 NZ_JPQY01000025.1 Protein Homology CDS 86205 87305 . + 0 ID=cds-WP_074055087.1;Parent=gene-IY40_RS15780;Dbxref=GenBank:WP_074055087.1;Name=WP_074055087.1;Ontology_term=GO:0006281,GO:0019104;gbkey=CDS;gene=mutY;go_function=DNA N-glycosylase activity|0019104||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019456100.1;locus_tag=IY40_RS15780;product=A/G-specific adenine glycosylase;protein_id=WP_074055087.1;transl_table=11 NZ_JPQY01000025.1 RefSeq gene 87302 87574 . + . ID=gene-IY40_RS15785;Name=IY40_RS15785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS15785;old_locus_tag=IY40_16065 NZ_JPQY01000025.1 Protein Homology CDS 87302 87574 . + 0 ID=cds-WP_004937404.1;Parent=gene-IY40_RS15785;Dbxref=GenBank:WP_004937404.1;Name=WP_004937404.1;Ontology_term=GO:0005506;gbkey=CDS;go_function=iron ion binding|0005506||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012442550.1;locus_tag=IY40_RS15785;product=oxidative damage protection protein;protein_id=WP_004937404.1;transl_table=11 NZ_JPQY01000025.1 RefSeq gene 87638 88714 . + . ID=gene-IY40_RS15790;Name=mltC;gbkey=Gene;gene=mltC;gene_biotype=protein_coding;locus_tag=IY40_RS15790;old_locus_tag=IY40_16070 NZ_JPQY01000025.1 Protein Homology CDS 87638 88714 . + 0 ID=cds-WP_004937402.1;Parent=gene-IY40_RS15790;Dbxref=GenBank:WP_004937402.1;Name=WP_004937402.1;Ontology_term=GO:0000270,GO:0008933,GO:0016020;gbkey=CDS;gene=mltC;go_component=membrane|0016020||IEA;go_function=peptidoglycan lytic transglycosylase activity|0008933||IEA;go_process=peptidoglycan metabolic process|0000270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014833231.1;locus_tag=IY40_RS15790;product=membrane-bound lytic murein transglycosylase MltC;protein_id=WP_004937402.1;transl_table=11 NZ_JPQY01000025.1 RefSeq gene 88765 90930 . - . ID=gene-IY40_RS15795;Name=speF;gbkey=Gene;gene=speF;gene_biotype=protein_coding;locus_tag=IY40_RS15795;old_locus_tag=IY40_16075 NZ_JPQY01000025.1 Protein Homology CDS 88765 90930 . - 0 ID=cds-WP_043141366.1;Parent=gene-IY40_RS15795;Dbxref=GenBank:WP_043141366.1;Name=WP_043141366.1;Ontology_term=GO:0006520,GO:0004586;gbkey=CDS;gene=speF;go_function=ornithine decarboxylase activity|0004586||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012146749.1;locus_tag=IY40_RS15795;product=ornithine decarboxylase SpeF;protein_id=WP_043141366.1;transl_table=11 NZ_JPQY01000025.1 RefSeq gene 91637 91712 . + . ID=gene-IY40_RS15800;Name=IY40_RS15800;gbkey=Gene;gene_biotype=tRNA;locus_tag=IY40_RS15800;old_locus_tag=IY40_16080 NZ_JPQY01000025.1 tRNAscan-SE tRNA 91637 91712 . + . ID=rna-IY40_RS15800;Parent=gene-IY40_RS15800;anticodon=(pos:91670..91672);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=IY40_RS15800;product=tRNA-Phe NZ_JPQY01000025.1 tRNAscan-SE exon 91637 91712 . + . ID=exon-IY40_RS15800-1;Parent=rna-IY40_RS15800;anticodon=(pos:91670..91672);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=IY40_RS15800;product=tRNA-Phe ##sequence-region NZ_JPQY01000026.1 1 289881 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=615 NZ_JPQY01000026.1 RefSeq region 1 289881 . + . ID=NZ_JPQY01000026.1:1..289881;Dbxref=taxon:615;collected-by=Mahloro H. Serepa%3B Vincent M. Gray;collection-date=2013-04-11;country=South Africa: North West Province;gbkey=Src;genome=genomic;identified-by=Mahloro H. Serepa%3B Vincent M. Gray;isolation-source=entomopathogenic nematode Oscheius sp. MCB living in soil;mol_type=genomic DNA;nat-host=Oscheius sp. MCB;strain=MCB NZ_JPQY01000026.1 RefSeq gene 1 1109 . + . ID=gene-IY40_RS15805;Name=pckA;gbkey=Gene;gene=pckA;gene_biotype=protein_coding;locus_tag=IY40_RS15805;old_locus_tag=IY40_16085;partial=true;start_range=.,1 NZ_JPQY01000026.1 Protein Homology CDS 1 1109 . + 2 ID=cds-WP_043141384.1;Parent=gene-IY40_RS15805;Dbxref=GenBank:WP_043141384.1;Name=WP_043141384.1;Ontology_term=GO:0006094,GO:0004612;gbkey=CDS;gene=pckA;go_function=phosphoenolpyruvate carboxykinase (ATP) activity|0004612||IEA;go_process=gluconeogenesis|0006094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011144506.1;locus_tag=IY40_RS15805;partial=true;product=phosphoenolpyruvate carboxykinase (ATP);protein_id=WP_043141384.1;start_range=.,1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 1166 1810 . - . ID=gene-IY40_RS15810;Name=IY40_RS15810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS15810;old_locus_tag=IY40_16090 NZ_JPQY01000026.1 Protein Homology CDS 1166 1810 . - 0 ID=cds-WP_043141387.1;Parent=gene-IY40_RS15810;Dbxref=GenBank:WP_043141387.1;Name=WP_043141387.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016928020.1;locus_tag=IY40_RS15810;product=TetR/AcrR family transcriptional regulator;protein_id=WP_043141387.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 1904 2602 . + . ID=gene-IY40_RS15815;Name=IY40_RS15815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS15815;old_locus_tag=IY40_16095 NZ_JPQY01000026.1 Protein Homology CDS 1904 2602 . + 0 ID=cds-WP_025302572.1;Parent=gene-IY40_RS15815;Dbxref=GenBank:WP_025302572.1;Name=WP_025302572.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004941325.1;locus_tag=IY40_RS15815;product=DAPG hydrolase family protein;protein_id=WP_025302572.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 2685 3071 . + . ID=gene-IY40_RS15820;Name=IY40_RS15820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS15820;old_locus_tag=IY40_16100 NZ_JPQY01000026.1 Protein Homology CDS 2685 3071 . + 0 ID=cds-WP_025302571.1;Parent=gene-IY40_RS15820;Dbxref=GenBank:WP_025302571.1;Name=WP_025302571.1;Ontology_term=GO:0016846,GO:0046872;gbkey=CDS;go_function=carbon-sulfur lyase activity|0016846||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019454852.1;locus_tag=IY40_RS15820;product=GFA family protein;protein_id=WP_025302571.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 3162 4466 . + . ID=gene-IY40_RS15825;Name=IY40_RS15825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS15825;old_locus_tag=IY40_16105 NZ_JPQY01000026.1 Protein Homology CDS 3162 4466 . + 0 ID=cds-WP_043141394.1;Parent=gene-IY40_RS15825;Dbxref=GenBank:WP_043141394.1;Name=WP_043141394.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016928023.1;locus_tag=IY40_RS15825;product=MFS transporter;protein_id=WP_043141394.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 4635 5894 . + . ID=gene-IY40_RS15830;Name=IY40_RS15830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS15830;old_locus_tag=IY40_16110 NZ_JPQY01000026.1 Protein Homology CDS 4635 5894 . + 0 ID=cds-WP_025302569.1;Parent=gene-IY40_RS15830;Dbxref=GenBank:WP_025302569.1;Name=WP_025302569.1;Ontology_term=GO:0008643,GO:0005351,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=carbohydrate:proton symporter activity|0005351||IEA;go_process=carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006320389.1;locus_tag=IY40_RS15830;product=MFS transporter;protein_id=WP_025302569.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 5891 7333 . + . ID=gene-IY40_RS15835;Name=IY40_RS15835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS15835;old_locus_tag=IY40_16115 NZ_JPQY01000026.1 Protein Homology CDS 5891 7333 . + 0 ID=cds-WP_043141397.1;Parent=gene-IY40_RS15835;Dbxref=GenBank:WP_043141397.1;Name=WP_043141397.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016928025.1;locus_tag=IY40_RS15835;product=glycoside hydrolase family 32 protein;protein_id=WP_043141397.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 7375 8376 . - . ID=gene-IY40_RS15840;Name=IY40_RS15840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS15840;old_locus_tag=IY40_16120 NZ_JPQY01000026.1 Protein Homology CDS 7375 8376 . - 0 ID=cds-WP_043141400.1;Parent=gene-IY40_RS15840;Dbxref=GenBank:WP_043141400.1;Name=WP_043141400.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013812581.1;locus_tag=IY40_RS15840;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_043141400.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 8446 9003 . - . ID=gene-IY40_RS15845;Name=IY40_RS15845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS15845;old_locus_tag=IY40_16125 NZ_JPQY01000026.1 Protein Homology CDS 8446 9003 . - 0 ID=cds-WP_043141404.1;Parent=gene-IY40_RS15845;Dbxref=GenBank:WP_043141404.1;Name=WP_043141404.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004941310.1;locus_tag=IY40_RS15845;product=HutD/Ves family protein;protein_id=WP_043141404.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 9003 10373 . - . ID=gene-IY40_RS15850;Name=IY40_RS15850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS15850;old_locus_tag=IY40_16130 NZ_JPQY01000026.1 Protein Homology CDS 9003 10373 . - 0 ID=cds-WP_043141407.1;Parent=gene-IY40_RS15850;Dbxref=GenBank:WP_043141407.1;Name=WP_043141407.1;Ontology_term=GO:0016810;gbkey=CDS;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006320410.1;locus_tag=IY40_RS15850;product=formimidoylglutamate deiminase;protein_id=WP_043141407.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 10554 11309 . + . ID=gene-IY40_RS15855;Name=hutC;gbkey=Gene;gene=hutC;gene_biotype=protein_coding;locus_tag=IY40_RS15855;old_locus_tag=IY40_16135 NZ_JPQY01000026.1 Protein Homology CDS 10554 11309 . + 0 ID=cds-WP_025302564.1;Parent=gene-IY40_RS15855;Dbxref=GenBank:WP_025302564.1;Name=WP_025302564.1;Ontology_term=GO:0006355,GO:0006547,GO:0045892,GO:0003677,GO:0003700;gbkey=CDS;gene=hutC;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,L-histidine metabolic process|0006547||IEA,negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006320412.1;locus_tag=IY40_RS15855;product=histidine utilization repressor;protein_id=WP_025302564.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 11467 12690 . + . ID=gene-IY40_RS15860;Name=hutI;gbkey=Gene;gene=hutI;gene_biotype=protein_coding;locus_tag=IY40_RS15860;old_locus_tag=IY40_16140 NZ_JPQY01000026.1 Protein Homology CDS 11467 12690 . + 0 ID=cds-WP_043141410.1;Parent=gene-IY40_RS15860;Dbxref=GenBank:WP_043141410.1;Name=WP_043141410.1;Ontology_term=GO:0019556,GO:0016812,GO:0050480,GO:0005737;gbkey=CDS;gene=hutI;go_component=cytoplasm|0005737||IEA;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds%2C in cyclic amides|0016812||IEA,imidazolonepropionase activity|0050480||IEA;go_process=L-histidine catabolic process to glutamate and formamide|0019556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012006499.1;locus_tag=IY40_RS15860;product=imidazolonepropionase;protein_id=WP_043141410.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 12687 13490 . + . ID=gene-IY40_RS15865;Name=hutG;gbkey=Gene;gene=hutG;gene_biotype=protein_coding;locus_tag=IY40_RS15865;old_locus_tag=IY40_16145 NZ_JPQY01000026.1 Protein Homology CDS 12687 13490 . + 0 ID=cds-WP_043141413.1;Parent=gene-IY40_RS15865;Dbxref=GenBank:WP_043141413.1;Name=WP_043141413.1;Ontology_term=GO:0019557,GO:0050129;gbkey=CDS;gene=hutG;go_function=N-formylglutamate deformylase activity|0050129||IEA;go_process=L-histidine catabolic process to glutamate and formate|0019557||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016928031.1;locus_tag=IY40_RS15865;product=N-formylglutamate deformylase;protein_id=WP_043141413.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 13736 15271 . + . ID=gene-IY40_RS15870;Name=IY40_RS15870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS15870;old_locus_tag=IY40_16150 NZ_JPQY01000026.1 Protein Homology CDS 13736 15271 . + 0 ID=cds-WP_043141415.1;Parent=gene-IY40_RS15870;Dbxref=GenBank:WP_043141415.1;Name=WP_043141415.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019454844.1;locus_tag=IY40_RS15870;product=serine hydrolase domain-containing protein;protein_id=WP_043141415.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 15275 15805 . - . ID=gene-IY40_RS15875;Name=IY40_RS15875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS15875;old_locus_tag=IY40_16155 NZ_JPQY01000026.1 Protein Homology CDS 15275 15805 . - 0 ID=cds-WP_043141419.1;Parent=gene-IY40_RS15875;Dbxref=GenBank:WP_043141419.1;Name=WP_043141419.1;Ontology_term=GO:0046417;gbkey=CDS;go_process=chorismate metabolic process|0046417||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015377641.1;locus_tag=IY40_RS15875;product=chorismate mutase;protein_id=WP_043141419.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 15921 16415 . - . ID=gene-IY40_RS15880;Name=IY40_RS15880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS15880;old_locus_tag=IY40_16160 NZ_JPQY01000026.1 Protein Homology CDS 15921 16415 . - 0 ID=cds-WP_033640576.1;Parent=gene-IY40_RS15880;Dbxref=GenBank:WP_033640576.1;Name=WP_033640576.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006320424.1;locus_tag=IY40_RS15880;product=anti-virulence regulator CigR family protein;protein_id=WP_033640576.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 16858 17037 . + . ID=gene-IY40_RS15885;Name=IY40_RS15885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS15885;old_locus_tag=IY40_16165 NZ_JPQY01000026.1 Protein Homology CDS 16858 17037 . + 0 ID=cds-WP_025302559.1;Parent=gene-IY40_RS15885;Dbxref=GenBank:WP_025302559.1;Name=WP_025302559.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006320432.1;locus_tag=IY40_RS15885;product=hypothetical protein;protein_id=WP_025302559.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 17090 17971 . - . ID=gene-IY40_RS15890;Name=IY40_RS15890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS15890;old_locus_tag=IY40_16170 NZ_JPQY01000026.1 Protein Homology CDS 17090 17971 . - 0 ID=cds-WP_004941293.1;Parent=gene-IY40_RS15890;Dbxref=GenBank:WP_004941293.1;Name=WP_004941293.1;Ontology_term=GO:0015858,GO:0015471,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=nucleoside-specific channel forming porin activity|0015471||IEA;go_process=nucleoside transport|0015858||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004943389.1;locus_tag=IY40_RS15890;product=nucleoside-specific channel-forming protein Tsx;protein_id=WP_004941293.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 18328 18969 . - . ID=gene-IY40_RS15895;Name=IY40_RS15895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS15895;old_locus_tag=IY40_16175 NZ_JPQY01000026.1 Protein Homology CDS 18328 18969 . - 0 ID=cds-WP_025302558.1;Parent=gene-IY40_RS15895;Dbxref=GenBank:WP_025302558.1;Name=WP_025302558.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009637219.1;locus_tag=IY40_RS15895;product=HD domain-containing protein;protein_id=WP_025302558.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 19085 20065 . + . ID=gene-IY40_RS15900;Name=IY40_RS15900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS15900;old_locus_tag=IY40_16180 NZ_JPQY01000026.1 Protein Homology CDS 19085 20065 . + 0 ID=cds-WP_025302557.1;Parent=gene-IY40_RS15900;Dbxref=GenBank:WP_025302557.1;Name=WP_025302557.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017492119.1;locus_tag=IY40_RS15900;product=GlxA family transcriptional regulator;protein_id=WP_025302557.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 20068 20340 . - . ID=gene-IY40_RS15905;Name=IY40_RS15905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS15905;old_locus_tag=IY40_16185 NZ_JPQY01000026.1 Protein Homology CDS 20068 20340 . - 0 ID=cds-WP_025302556.1;Parent=gene-IY40_RS15905;Dbxref=GenBank:WP_025302556.1;Name=WP_025302556.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012006493.1;locus_tag=IY40_RS15905;product=hypothetical protein;protein_id=WP_025302556.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 20414 21307 . - . ID=gene-IY40_RS15910;Name=yddG;gbkey=Gene;gene=yddG;gene_biotype=protein_coding;locus_tag=IY40_RS15910;old_locus_tag=IY40_16190 NZ_JPQY01000026.1 Protein Homology CDS 20414 21307 . - 0 ID=cds-WP_025302555.1;Parent=gene-IY40_RS15910;Dbxref=GenBank:WP_025302555.1;Name=WP_025302555.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yddG;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004941291.1;locus_tag=IY40_RS15910;product=aromatic amino acid DMT transporter YddG;protein_id=WP_025302555.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 21399 22769 . - . ID=gene-IY40_RS15915;Name=IY40_RS15915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS15915;old_locus_tag=IY40_16195 NZ_JPQY01000026.1 Protein Homology CDS 21399 22769 . - 0 ID=cds-WP_025302554.1;Parent=gene-IY40_RS15915;Dbxref=GenBank:WP_025302554.1;Name=WP_025302554.1;Ontology_term=GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019454837.1;locus_tag=IY40_RS15915;product=APC family permease;protein_id=WP_025302554.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 23078 24496 . - . ID=gene-IY40_RS15920;Name=IY40_RS15920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS15920;old_locus_tag=IY40_16200 NZ_JPQY01000026.1 Protein Homology CDS 23078 24496 . - 0 ID=cds-WP_025302553.1;Parent=gene-IY40_RS15920;Dbxref=GenBank:WP_025302553.1;Name=WP_025302553.1;Ontology_term=GO:0006542,GO:0004356,GO:0005524,GO:0046872;gbkey=CDS;go_function=glutamine synthetase activity|0004356||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=glutamine biosynthetic process|0006542||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226196.1;locus_tag=IY40_RS15920;product=glutamine synthetase family protein;protein_id=WP_025302553.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 24716 25477 . + . ID=gene-IY40_RS15925;Name=puuD;gbkey=Gene;gene=puuD;gene_biotype=protein_coding;locus_tag=IY40_RS15925;old_locus_tag=IY40_16205 NZ_JPQY01000026.1 Protein Homology CDS 24716 25477 . + 0 ID=cds-WP_025302552.1;Parent=gene-IY40_RS15925;Dbxref=GenBank:WP_025302552.1;Name=WP_025302552.1;Ontology_term=GO:0016787;gbkey=CDS;gene=puuD;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004941285.1;locus_tag=IY40_RS15925;product=gamma-glutamyl-gamma-aminobutyrate hydrolase;protein_id=WP_025302552.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 25474 26031 . + . ID=gene-IY40_RS15930;Name=puuR;gbkey=Gene;gene=puuR;gene_biotype=protein_coding;locus_tag=IY40_RS15930;old_locus_tag=IY40_16210 NZ_JPQY01000026.1 Protein Homology CDS 25474 26031 . + 0 ID=cds-WP_016928041.1;Parent=gene-IY40_RS15930;Dbxref=GenBank:WP_016928041.1;Name=WP_016928041.1;gbkey=CDS;gene=puuR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001464354.1;locus_tag=IY40_RS15930;product=HTH-type transcriptional regulator PuuR;protein_id=WP_016928041.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 26047 27543 . + . ID=gene-IY40_RS15935;Name=puuC;gbkey=Gene;gene=puuC;gene_biotype=protein_coding;locus_tag=IY40_RS15935;old_locus_tag=IY40_16215 NZ_JPQY01000026.1 Protein Homology CDS 26047 27543 . + 0 ID=cds-WP_043141427.1;Parent=gene-IY40_RS15935;Dbxref=GenBank:WP_043141427.1;Name=WP_043141427.1;Ontology_term=GO:0016620;gbkey=CDS;gene=puuC;go_function=oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017892573.1;locus_tag=IY40_RS15935;product=aldehyde dehydrogenase PuuC;protein_id=WP_043141427.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 27555 28835 . + . ID=gene-IY40_RS15940;Name=IY40_RS15940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS15940;old_locus_tag=IY40_16220 NZ_JPQY01000026.1 Protein Homology CDS 27555 28835 . + 0 ID=cds-WP_025302550.1;Parent=gene-IY40_RS15940;Dbxref=GenBank:WP_025302550.1;Name=WP_025302550.1;Ontology_term=GO:0016491,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226191.1;locus_tag=IY40_RS15940;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_025302550.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 28880 29635 . - . ID=gene-IY40_RS15945;Name=IY40_RS15945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS15945;old_locus_tag=IY40_16225 NZ_JPQY01000026.1 Protein Homology CDS 28880 29635 . - 0 ID=cds-WP_025302549.1;Parent=gene-IY40_RS15945;Dbxref=GenBank:WP_025302549.1;Name=WP_025302549.1;Ontology_term=GO:0016491,GO:0070403;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017892571.1;locus_tag=IY40_RS15945;product=meso-2%2C3-butanediol dehydrogenase;protein_id=WP_025302549.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 29951 30379 . - . ID=gene-IY40_RS15950;Name=IY40_RS15950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS15950;old_locus_tag=IY40_16230 NZ_JPQY01000026.1 Protein Homology CDS 29951 30379 . - 0 ID=cds-WP_025302548.1;Parent=gene-IY40_RS15950;Dbxref=GenBank:WP_025302548.1;Name=WP_025302548.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004941273.1;locus_tag=IY40_RS15950;product=universal stress protein;protein_id=WP_025302548.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 30633 31310 . + . ID=gene-IY40_RS15955;Name=IY40_RS15955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS15955;old_locus_tag=IY40_16235 NZ_JPQY01000026.1 Protein Homology CDS 30633 31310 . + 0 ID=cds-WP_016928046.1;Parent=gene-IY40_RS15955;Dbxref=GenBank:WP_016928046.1;Name=WP_016928046.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459926.1;locus_tag=IY40_RS15955;product=isochorismatase family protein;protein_id=WP_016928046.1;transl_table=11 NZ_JPQY01000026.1 RefSeq pseudogene 31524 31601 . - . ID=gene-IY40_RS15960;Name=IY40_RS15960;gbkey=Gene;gene_biotype=tRNA_pseudogene;locus_tag=IY40_RS15960;old_locus_tag=IY40_16240;pseudo=true NZ_JPQY01000026.1 tRNAscan-SE pseudogenic_tRNA 31524 31601 . - . ID=rna-IY40_RS15960;Parent=gene-IY40_RS15960;anticodon=(pos:complement(31568..31570));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=IY40_RS15960;product=tRNA-Phe;pseudo=true NZ_JPQY01000026.1 tRNAscan-SE exon 31568 31601 . - . ID=exon-IY40_RS15960-1;Parent=rna-IY40_RS15960;anticodon=(pos:complement(31568..31570));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=IY40_RS15960;product=tRNA-Phe;pseudo=true NZ_JPQY01000026.1 tRNAscan-SE exon 31524 31561 . - . ID=exon-IY40_RS15960-2;Parent=rna-IY40_RS15960;anticodon=(pos:complement(31568..31570));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=IY40_RS15960;product=tRNA-Phe;pseudo=true NZ_JPQY01000026.1 RefSeq gene 31716 31928 . - . ID=gene-IY40_RS15965;Name=cspE;gbkey=Gene;gene=cspE;gene_biotype=protein_coding;gene_synonym=gicA,msmC;locus_tag=IY40_RS15965;old_locus_tag=IY40_16245 NZ_JPQY01000026.1 Protein Homology CDS 31716 31928 . - 0 ID=cds-WP_025302547.1;Parent=gene-IY40_RS15965;Dbxref=GenBank:WP_025302547.1;Name=WP_025302547.1;Ontology_term=GO:0031564,GO:0001072,GO:0003697,GO:0003723;gbkey=CDS;gene=cspE;go_function=transcription antitermination factor activity%2C RNA binding|0001072||IEA,single-stranded DNA binding|0003697||IEA,RNA binding|0003723||IEA;go_process=transcription antitermination|0031564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210052.1;locus_tag=IY40_RS15965;product=transcription antiterminator/RNA stability regulator CspE;protein_id=WP_025302547.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 32305 32928 . + . ID=gene-IY40_RS15970;Name=IY40_RS15970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS15970;old_locus_tag=IY40_16250 NZ_JPQY01000026.1 Protein Homology CDS 32305 32928 . + 0 ID=cds-WP_043141429.1;Parent=gene-IY40_RS15970;Dbxref=GenBank:WP_043141429.1;Name=WP_043141429.1;Ontology_term=GO:0006865,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015377631.1;locus_tag=IY40_RS15970;product=LysE family translocator;protein_id=WP_043141429.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 32918 33562 . - . ID=gene-IY40_RS15975;Name=IY40_RS15975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS15975;old_locus_tag=IY40_16255 NZ_JPQY01000026.1 Protein Homology CDS 32918 33562 . - 0 ID=cds-WP_025302545.1;Parent=gene-IY40_RS15975;Dbxref=GenBank:WP_025302545.1;Name=WP_025302545.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017900990.1;locus_tag=IY40_RS15975;product=Qnr family pentapeptide repeat protein;protein_id=WP_025302545.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 33638 34711 . - . ID=gene-IY40_RS15980;Name=IY40_RS15980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS15980;old_locus_tag=IY40_16260 NZ_JPQY01000026.1 Protein Homology CDS 33638 34711 . - 0 ID=cds-WP_050505173.1;Parent=gene-IY40_RS15980;Dbxref=GenBank:WP_050505173.1;Name=WP_050505173.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019454828.1;locus_tag=IY40_RS15980;product=SMP-30/gluconolactonase/LRE family protein;protein_id=WP_050505173.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 34865 35074 . - . ID=gene-IY40_RS15985;Name=IY40_RS15985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS15985;old_locus_tag=IY40_16265 NZ_JPQY01000026.1 Protein Homology CDS 34865 35074 . - 0 ID=cds-WP_004941260.1;Parent=gene-IY40_RS15985;Dbxref=GenBank:WP_004941260.1;Name=WP_004941260.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004941260.1;locus_tag=IY40_RS15985;product=hypothetical protein;protein_id=WP_004941260.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 35216 35566 . + . ID=gene-IY40_RS15990;Name=IY40_RS15990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS15990;old_locus_tag=IY40_16270 NZ_JPQY01000026.1 Protein Homology CDS 35216 35566 . + 0 ID=cds-WP_043141436.1;Parent=gene-IY40_RS15990;Dbxref=GenBank:WP_043141436.1;Name=WP_043141436.1;Ontology_term=GO:0016846,GO:0046872;gbkey=CDS;go_function=carbon-sulfur lyase activity|0016846||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015377628.1;locus_tag=IY40_RS15990;product=GFA family protein;protein_id=WP_043141436.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 35580 36752 . - . ID=gene-IY40_RS15995;Name=IY40_RS15995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS15995;old_locus_tag=IY40_16275 NZ_JPQY01000026.1 Protein Homology CDS 35580 36752 . - 0 ID=cds-WP_043141440.1;Parent=gene-IY40_RS15995;Dbxref=GenBank:WP_043141440.1;Name=WP_043141440.1;Ontology_term=GO:0000166,GO:0003824;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015377627.1;locus_tag=IY40_RS15995;product=Gfo/Idh/MocA family protein;protein_id=WP_043141440.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 36767 37690 . - . ID=gene-IY40_RS16000;Name=IY40_RS16000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS16000;old_locus_tag=IY40_16280 NZ_JPQY01000026.1 Protein Homology CDS 36767 37690 . - 0 ID=cds-WP_043141443.1;Parent=gene-IY40_RS16000;Dbxref=GenBank:WP_043141443.1;Name=WP_043141443.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004179995.1;locus_tag=IY40_RS16000;product=TIM barrel protein;protein_id=WP_043141443.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 37877 38908 . - . ID=gene-IY40_RS16005;Name=IY40_RS16005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS16005;old_locus_tag=IY40_16285 NZ_JPQY01000026.1 Protein Homology CDS 37877 38908 . - 0 ID=cds-WP_043141446.1;Parent=gene-IY40_RS16005;Dbxref=GenBank:WP_043141446.1;Name=WP_043141446.1;Ontology_term=GO:0006351,GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=DNA-templated transcription|0006351||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004941249.1;locus_tag=IY40_RS16005;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_043141446.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 38981 39397 . - . ID=gene-IY40_RS16010;Name=IY40_RS16010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS16010;old_locus_tag=IY40_16290 NZ_JPQY01000026.1 Protein Homology CDS 38981 39397 . - 0 ID=cds-WP_004941246.1;Parent=gene-IY40_RS16010;Dbxref=GenBank:WP_004941246.1;Name=WP_004941246.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004941246.1;locus_tag=IY40_RS16010;product=DUF2000 domain-containing protein;protein_id=WP_004941246.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 39496 39954 . - . ID=gene-IY40_RS16015;Name=IY40_RS16015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS16015;old_locus_tag=IY40_16295 NZ_JPQY01000026.1 Protein Homology CDS 39496 39954 . - 0 ID=cds-WP_043141449.1;Parent=gene-IY40_RS16015;Dbxref=GenBank:WP_043141449.1;Name=WP_043141449.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004941243.1;locus_tag=IY40_RS16015;product=hypothetical protein;protein_id=WP_043141449.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 40187 41398 . + . ID=gene-IY40_RS16020;Name=IY40_RS16020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS16020;old_locus_tag=IY40_16300 NZ_JPQY01000026.1 Protein Homology CDS 40187 41398 . + 0 ID=cds-WP_043141453.1;Parent=gene-IY40_RS16020;Dbxref=GenBank:WP_043141453.1;Name=WP_043141453.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013812549.1;locus_tag=IY40_RS16020;product=MFS transporter;protein_id=WP_043141453.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 41463 41600 . - . ID=gene-IY40_RS26395;Name=IY40_RS26395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS26395 NZ_JPQY01000026.1 Protein Homology CDS 41463 41600 . - 0 ID=cds-WP_162837928.1;Parent=gene-IY40_RS26395;Dbxref=GenBank:WP_162837928.1;Name=WP_162837928.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016928056.1;locus_tag=IY40_RS26395;product=hypothetical protein;protein_id=WP_162837928.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 41895 43013 . + . ID=gene-IY40_RS16025;Name=IY40_RS16025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS16025;old_locus_tag=IY40_16305 NZ_JPQY01000026.1 Protein Homology CDS 41895 43013 . + 0 ID=cds-WP_025302537.1;Parent=gene-IY40_RS16025;Dbxref=GenBank:WP_025302537.1;Name=WP_025302537.1;Ontology_term=GO:0055085,GO:1905887,GO:0015562;gbkey=CDS;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=transmembrane transport|0055085||IEA,autoinducer AI-2 transmembrane transport|1905887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017803672.1;locus_tag=IY40_RS16025;product=AI-2E family transporter;protein_id=WP_025302537.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 43107 43319 . + . ID=gene-IY40_RS16030;Name=IY40_RS16030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS16030;old_locus_tag=IY40_16310 NZ_JPQY01000026.1 Protein Homology CDS 43107 43319 . + 0 ID=cds-WP_043141458.1;Parent=gene-IY40_RS16030;Dbxref=GenBank:WP_043141458.1;Name=WP_043141458.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015377618.1;locus_tag=IY40_RS16030;product=hypothetical protein;protein_id=WP_043141458.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 43316 43735 . - . ID=gene-IY40_RS16035;Name=IY40_RS16035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS16035;old_locus_tag=IY40_16315 NZ_JPQY01000026.1 Protein Homology CDS 43316 43735 . - 0 ID=cds-WP_043141461.1;Parent=gene-IY40_RS16035;Dbxref=GenBank:WP_043141461.1;Name=WP_043141461.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015377617.1;locus_tag=IY40_RS16035;product=GNAT family N-acetyltransferase;protein_id=WP_043141461.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 43882 44172 . + . ID=gene-IY40_RS16040;Name=IY40_RS16040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS16040;old_locus_tag=IY40_16320 NZ_JPQY01000026.1 Protein Homology CDS 43882 44172 . + 0 ID=cds-WP_025302534.1;Parent=gene-IY40_RS16040;Dbxref=GenBank:WP_025302534.1;Name=WP_025302534.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015377616.1;locus_tag=IY40_RS16040;product=hypothetical protein;protein_id=WP_025302534.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 44341 44877 . + . ID=gene-IY40_RS16045;Name=IY40_RS16045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS16045;old_locus_tag=IY40_16325 NZ_JPQY01000026.1 Protein Homology CDS 44341 44877 . + 0 ID=cds-WP_043141464.1;Parent=gene-IY40_RS16045;Dbxref=GenBank:WP_043141464.1;Name=WP_043141464.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: protein motif:HMM:NF024698.6;locus_tag=IY40_RS16045;product=GNAT family N-acetyltransferase;protein_id=WP_043141464.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 44994 45434 . - . ID=gene-IY40_RS16050;Name=tolA;gbkey=Gene;gene=tolA;gene_biotype=protein_coding;locus_tag=IY40_RS16050;old_locus_tag=IY40_16330 NZ_JPQY01000026.1 Protein Homology CDS 44994 45434 . - 0 ID=cds-WP_043141467.1;Parent=gene-IY40_RS16050;Dbxref=GenBank:WP_043141467.1;Name=WP_043141467.1;Ontology_term=GO:0006810,GO:0005215,GO:0098567;gbkey=CDS;gene=tolA;go_component=periplasmic side of plasma membrane|0098567||IEA;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004941218.1;locus_tag=IY40_RS16050;product=cell envelope integrity protein TolA;protein_id=WP_043141467.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 45781 46014 . + . ID=gene-IY40_RS16055;Name=IY40_RS16055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS16055;old_locus_tag=IY40_16335 NZ_JPQY01000026.1 Protein Homology CDS 45781 46014 . + 0 ID=cds-WP_019454814.1;Parent=gene-IY40_RS16055;Dbxref=GenBank:WP_019454814.1;Name=WP_019454814.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008502027.1;locus_tag=IY40_RS16055;product=YgdI/YgdR family lipoprotein;protein_id=WP_019454814.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 46027 46254 . + . ID=gene-IY40_RS16060;Name=IY40_RS16060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS16060;old_locus_tag=IY40_16340 NZ_JPQY01000026.1 Protein Homology CDS 46027 46254 . + 0 ID=cds-WP_025302531.1;Parent=gene-IY40_RS16060;Dbxref=GenBank:WP_025302531.1;Name=WP_025302531.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010615788.1;locus_tag=IY40_RS16060;product=YgdI/YgdR family lipoprotein;protein_id=WP_025302531.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 46473 46922 . + . ID=gene-IY40_RS16065;Name=uspF;gbkey=Gene;gene=uspF;gene_biotype=protein_coding;locus_tag=IY40_RS16065;old_locus_tag=IY40_16345 NZ_JPQY01000026.1 Protein Homology CDS 46473 46922 . + 0 ID=cds-WP_025302530.1;Parent=gene-IY40_RS16065;Dbxref=GenBank:WP_025302530.1;Name=WP_025302530.1;gbkey=CDS;gene=uspF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004941216.1;locus_tag=IY40_RS16065;product=universal stress protein UspF;protein_id=WP_025302530.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 47268 48167 . - . ID=gene-IY40_RS16070;Name=IY40_RS16070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS16070;old_locus_tag=IY40_16350 NZ_JPQY01000026.1 Protein Homology CDS 47268 48167 . - 0 ID=cds-WP_043141470.1;Parent=gene-IY40_RS16070;Dbxref=GenBank:WP_043141470.1;Name=WP_043141470.1;Ontology_term=GO:0003677,GO:0004519;gbkey=CDS;go_function=DNA binding|0003677||IEA,endonuclease activity|0004519||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017892510.1;locus_tag=IY40_RS16070;product=HNH endonuclease;protein_id=WP_043141470.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 48378 49631 . - . ID=gene-IY40_RS16075;Name=icd;gbkey=Gene;gene=icd;gene_biotype=protein_coding;locus_tag=IY40_RS16075;old_locus_tag=IY40_16355 NZ_JPQY01000026.1 Protein Homology CDS 48378 49631 . - 0 ID=cds-WP_015377612.1;Parent=gene-IY40_RS16075;Dbxref=GenBank:WP_015377612.1;Name=WP_015377612.1;Ontology_term=GO:0006099,GO:0000287,GO:0004450,GO:0051287;gbkey=CDS;gene=icd;go_function=magnesium ion binding|0000287||IEA,isocitrate dehydrogenase (NADP+) activity|0004450||IEA,NAD binding|0051287||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226321.1;locus_tag=IY40_RS16075;product=NADP-dependent isocitrate dehydrogenase;protein_id=WP_015377612.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 49763 50389 . + . ID=gene-IY40_RS16080;Name=rluE;gbkey=Gene;gene=rluE;gene_biotype=protein_coding;locus_tag=IY40_RS16080;old_locus_tag=IY40_16360 NZ_JPQY01000026.1 Protein Homology CDS 49763 50389 . + 0 ID=cds-WP_043141474.1;Parent=gene-IY40_RS16080;Dbxref=GenBank:WP_043141474.1;Name=WP_043141474.1;Ontology_term=GO:0001522,GO:0009982;gbkey=CDS;gene=rluE;go_function=pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006324832.1;locus_tag=IY40_RS16080;product=23S rRNA pseudouridine(2457) synthase RluE;protein_id=WP_043141474.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 50412 50750 . + . ID=gene-IY40_RS16085;Name=IY40_RS16085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS16085;old_locus_tag=IY40_16365 NZ_JPQY01000026.1 Protein Homology CDS 50412 50750 . + 0 ID=cds-WP_043141477.1;Parent=gene-IY40_RS16085;Dbxref=GenBank:WP_043141477.1;Name=WP_043141477.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015377610.1;locus_tag=IY40_RS16085;product=lysozyme inhibitor LprI family protein;protein_id=WP_043141477.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 50760 51206 . + . ID=gene-IY40_RS16090;Name=IY40_RS16090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS16090;old_locus_tag=IY40_16370 NZ_JPQY01000026.1 Protein Homology CDS 50760 51206 . + 0 ID=cds-WP_025302526.1;Parent=gene-IY40_RS16090;Dbxref=GenBank:WP_025302526.1;Name=WP_025302526.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006324831.1;locus_tag=IY40_RS16090;product=NUDIX hydrolase;protein_id=WP_025302526.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 51313 52413 . + . ID=gene-IY40_RS16095;Name=mnmA;gbkey=Gene;gene=mnmA;gene_biotype=protein_coding;gene_synonym=trmU;locus_tag=IY40_RS16095;old_locus_tag=IY40_16375 NZ_JPQY01000026.1 Protein Homology CDS 51313 52413 . + 0 ID=cds-WP_043141480.1;Parent=gene-IY40_RS16095;Dbxref=GenBank:WP_043141480.1;Name=WP_043141480.1;Ontology_term=GO:0002143,GO:0006396,GO:0004808,GO:0016783,GO:0005737;gbkey=CDS;gene=mnmA;go_component=cytoplasm|0005737||IEA;go_function=tRNA (5-methylaminomethyl-2-thiouridylate)(34)-methyltransferase activity|0004808||IEA,sulfurtransferase activity|0016783||IEA;go_process=tRNA wobble position uridine thiolation|0002143||IEA,RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004941202.1;locus_tag=IY40_RS16095;product=tRNA 2-thiouridine(34) synthase MnmA;protein_id=WP_043141480.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 52463 54331 . - . ID=gene-IY40_RS16100;Name=kup;gbkey=Gene;gene=kup;gene_biotype=protein_coding;locus_tag=IY40_RS16100;old_locus_tag=IY40_16380 NZ_JPQY01000026.1 Protein Homology CDS 52463 54331 . - 0 ID=cds-WP_016928067.1;Parent=gene-IY40_RS16100;Dbxref=GenBank:WP_016928067.1;Name=WP_016928067.1;Ontology_term=GO:0015079,GO:0016020;gbkey=CDS;gene=kup;go_component=membrane|0016020||IEA;go_function=potassium ion transmembrane transporter activity|0015079||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015377607.1;locus_tag=IY40_RS16100;product=low affinity potassium transporter Kup;protein_id=WP_016928067.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 54663 55289 . + . ID=gene-IY40_RS16105;Name=hflD;gbkey=Gene;gene=hflD;gene_biotype=protein_coding;locus_tag=IY40_RS16105;old_locus_tag=IY40_16385 NZ_JPQY01000026.1 Protein Homology CDS 54663 55289 . + 0 ID=cds-WP_025302523.1;Parent=gene-IY40_RS16105;Dbxref=GenBank:WP_025302523.1;Name=WP_025302523.1;gbkey=CDS;gene=hflD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013812534.1;locus_tag=IY40_RS16105;product=high frequency lysogenization protein HflD;protein_id=WP_025302523.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 55312 56682 . + . ID=gene-IY40_RS16110;Name=purB;gbkey=Gene;gene=purB;gene_biotype=protein_coding;locus_tag=IY40_RS16110;old_locus_tag=IY40_16390 NZ_JPQY01000026.1 Protein Homology CDS 55312 56682 . + 0 ID=cds-WP_043141486.1;Parent=gene-IY40_RS16110;Dbxref=GenBank:WP_043141486.1;Name=WP_043141486.1;Ontology_term=GO:0006188,GO:0009152,GO:0004018;gbkey=CDS;gene=purB;go_function=N6-(1%2C2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity|0004018||IEA;go_process=IMP biosynthetic process|0006188||IEA,purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002950897.1;locus_tag=IY40_RS16110;product=adenylosuccinate lyase;protein_id=WP_043141486.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 56731 57435 . - . ID=gene-IY40_RS16115;Name=IY40_RS16115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS16115;old_locus_tag=IY40_16395 NZ_JPQY01000026.1 Protein Homology CDS 56731 57435 . - 0 ID=cds-WP_025302521.1;Parent=gene-IY40_RS16115;Dbxref=GenBank:WP_025302521.1;Name=WP_025302521.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015377606.1;locus_tag=IY40_RS16115;product=GNAT family N-acetyltransferase;protein_id=WP_025302521.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 57451 57903 . - . ID=gene-IY40_RS16120;Name=IY40_RS16120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS16120;old_locus_tag=IY40_16400 NZ_JPQY01000026.1 Protein Homology CDS 57451 57903 . - 0 ID=cds-WP_043141490.1;Parent=gene-IY40_RS16120;Dbxref=GenBank:WP_043141490.1;Name=WP_043141490.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004941187.1;locus_tag=IY40_RS16120;product=GNAT family N-acetyltransferase;protein_id=WP_043141490.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 58019 59533 . - . ID=gene-IY40_RS16125;Name=pdxR;gbkey=Gene;gene=pdxR;gene_biotype=protein_coding;locus_tag=IY40_RS16125;old_locus_tag=IY40_16405 NZ_JPQY01000026.1 Protein Homology CDS 58019 59533 . - 0 ID=cds-WP_043141493.1;Parent=gene-IY40_RS16125;Dbxref=GenBank:WP_043141493.1;Name=WP_043141493.1;Ontology_term=GO:0042823,GO:2000142,GO:0070279;gbkey=CDS;gene=pdxR;go_function=vitamin B6 binding|0070279||IEA;go_process=pyridoxal phosphate biosynthetic process|0042823||IEA,regulation of DNA-templated transcription initiation|2000142||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015377604.1;locus_tag=IY40_RS16125;product=MocR-like pyridoxine biosynthesis transcription factor PdxR;protein_id=WP_043141493.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 59672 60436 . + . ID=gene-IY40_RS16130;Name=IY40_RS16130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS16130;old_locus_tag=IY40_16410 NZ_JPQY01000026.1 Protein Homology CDS 59672 60436 . + 0 ID=cds-WP_043141496.1;Parent=gene-IY40_RS16130;Dbxref=GenBank:WP_043141496.1;Name=WP_043141496.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004941173.1;locus_tag=IY40_RS16130;product=GntR family transcriptional regulator;protein_id=WP_043141496.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 60441 61460 . - . ID=gene-IY40_RS16135;Name=IY40_RS16135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS16135;old_locus_tag=IY40_16415 NZ_JPQY01000026.1 Protein Homology CDS 60441 61460 . - 0 ID=cds-WP_025302514.1;Parent=gene-IY40_RS16135;Dbxref=GenBank:WP_025302514.1;Name=WP_025302514.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016928074.1;locus_tag=IY40_RS16135;product=ADP-ribosylglycohydrolase family protein;protein_id=WP_025302514.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 61839 62510 . + . ID=gene-IY40_RS16140;Name=phoP;gbkey=Gene;gene=phoP;gene_biotype=protein_coding;locus_tag=IY40_RS16140;old_locus_tag=IY40_16420 NZ_JPQY01000026.1 Protein Homology CDS 61839 62510 . + 0 ID=cds-WP_025302513.1;Parent=gene-IY40_RS16140;Dbxref=GenBank:WP_025302513.1;Name=WP_025302513.1;gbkey=CDS;gene=phoP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012006437.1;locus_tag=IY40_RS16140;product=two-component system response regulator PhoP;protein_id=WP_025302513.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 62516 63973 . + . ID=gene-IY40_RS16145;Name=phoQ;gbkey=Gene;gene=phoQ;gene_biotype=protein_coding;locus_tag=IY40_RS16145;old_locus_tag=IY40_16425 NZ_JPQY01000026.1 Protein Homology CDS 62516 63973 . + 0 ID=cds-WP_025160271.1;Parent=gene-IY40_RS16145;Dbxref=GenBank:WP_025160271.1;Name=WP_025160271.1;Ontology_term=GO:0000160,GO:0000155,GO:0004673,GO:0016772;gbkey=CDS;gene=phoQ;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,transferase activity%2C transferring phosphorus-containing groups|0016772||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004941164.1;locus_tag=IY40_RS16145;product=two-component system sensor histidine kinase PhoQ;protein_id=WP_025160271.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 64058 65179 . + . ID=gene-IY40_RS16150;Name=IY40_RS16150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS16150;old_locus_tag=IY40_16430 NZ_JPQY01000026.1 Protein Homology CDS 64058 65179 . + 0 ID=cds-WP_004941161.1;Parent=gene-IY40_RS16150;Dbxref=GenBank:WP_004941161.1;Name=WP_004941161.1;Ontology_term=GO:0043687,GO:0008198,GO:0016706;gbkey=CDS;go_function=ferrous iron binding|0008198||IEA,2-oxoglutarate-dependent dioxygenase activity|0016706||IEA;go_process=post-translational protein modification|0043687||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011816139.1;locus_tag=IY40_RS16150;product=ribosomal protein uL16 3-hydroxylase;protein_id=WP_004941161.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 65221 66309 . - . ID=gene-IY40_RS16155;Name=IY40_RS16155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS16155;old_locus_tag=IY40_16435 NZ_JPQY01000026.1 Protein Homology CDS 65221 66309 . - 0 ID=cds-WP_043141499.1;Parent=gene-IY40_RS16155;Dbxref=GenBank:WP_043141499.1;Name=WP_043141499.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004941157.1;locus_tag=IY40_RS16155;product=malate/lactate/ureidoglycolate dehydrogenase;protein_id=WP_043141499.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 66400 67629 . - . ID=gene-IY40_RS16160;Name=pepT;gbkey=Gene;gene=pepT;gene_biotype=protein_coding;locus_tag=IY40_RS16160;old_locus_tag=IY40_16440 NZ_JPQY01000026.1 Protein Homology CDS 66400 67629 . - 0 ID=cds-WP_004941154.1;Parent=gene-IY40_RS16160;Dbxref=GenBank:WP_004941154.1;Name=WP_004941154.1;Ontology_term=GO:0006508,GO:0008270,GO:0045148;gbkey=CDS;gene=pepT;go_function=zinc ion binding|0008270||IEA,tripeptide aminopeptidase activity|0045148||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004941154.1;locus_tag=IY40_RS16160;product=peptidase T;protein_id=WP_004941154.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 67687 67959 . + . ID=gene-IY40_RS26030;Name=IY40_RS26030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS26030 NZ_JPQY01000026.1 GeneMarkS-2+ CDS 67687 67959 . + 0 ID=cds-WP_141997848.1;Parent=gene-IY40_RS26030;Dbxref=GenBank:WP_141997848.1;Name=WP_141997848.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IY40_RS26030;product=hypothetical protein;protein_id=WP_141997848.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 67985 69100 . + . ID=gene-IY40_RS16165;Name=potA;gbkey=Gene;gene=potA;gene_biotype=protein_coding;locus_tag=IY40_RS16165;old_locus_tag=IY40_16445 NZ_JPQY01000026.1 Protein Homology CDS 67985 69100 . + 0 ID=cds-WP_025302511.1;Parent=gene-IY40_RS16165;Dbxref=GenBank:WP_025302511.1;Name=WP_025302511.1;Ontology_term=GO:0015846,GO:0005524,GO:0022857,GO:0016020,GO:0043190;gbkey=CDS;gene=potA;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,transmembrane transporter activity|0022857||IEA;go_process=polyamine transport|0015846||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019454793.1;locus_tag=IY40_RS16165;product=spermidine/putrescine ABC transporter ATP-binding protein PotA;protein_id=WP_025302511.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 69084 69944 . + . ID=gene-IY40_RS16170;Name=potB;gbkey=Gene;gene=potB;gene_biotype=protein_coding;locus_tag=IY40_RS16170;old_locus_tag=IY40_16450 NZ_JPQY01000026.1 Protein Homology CDS 69084 69944 . + 0 ID=cds-WP_043141503.1;Parent=gene-IY40_RS16170;Dbxref=GenBank:WP_043141503.1;Name=WP_043141503.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=potB;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015377588.1;locus_tag=IY40_RS16170;product=spermidine/putrescine ABC transporter permease PotB;protein_id=WP_043141503.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 69941 70723 . + . ID=gene-IY40_RS16175;Name=potC;gbkey=Gene;gene=potC;gene_biotype=protein_coding;locus_tag=IY40_RS16175;old_locus_tag=IY40_16455 NZ_JPQY01000026.1 Protein Homology CDS 69941 70723 . + 0 ID=cds-WP_043141506.1;Parent=gene-IY40_RS16175;Dbxref=GenBank:WP_043141506.1;Name=WP_043141506.1;Ontology_term=GO:0055085;gbkey=CDS;gene=potC;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019454791.1;locus_tag=IY40_RS16175;product=spermidine/putrescine ABC transporter permease PotC;protein_id=WP_043141506.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 70941 72500 . + . ID=gene-IY40_RS16180;Name=IY40_RS16180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS16180;old_locus_tag=IY40_16460 NZ_JPQY01000026.1 Protein Homology CDS 70941 72500 . + 0 ID=cds-WP_025302508.1;Parent=gene-IY40_RS16180;Dbxref=GenBank:WP_025302508.1;Name=WP_025302508.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006316768.1;locus_tag=IY40_RS16180;product=PTS transporter subunit EIIC;protein_id=WP_025302508.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 72525 73910 . + . ID=gene-IY40_RS16185;Name=IY40_RS16185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS16185;old_locus_tag=IY40_16465 NZ_JPQY01000026.1 Protein Homology CDS 72525 73910 . + 0 ID=cds-WP_025302507.1;Parent=gene-IY40_RS16185;Dbxref=GenBank:WP_025302507.1;Name=WP_025302507.1;Ontology_term=GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004205096.1;locus_tag=IY40_RS16185;product=family 4 glycosyl hydrolase;protein_id=WP_025302507.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 73928 74638 . - . ID=gene-IY40_RS16190;Name=IY40_RS16190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS16190;old_locus_tag=IY40_16470 NZ_JPQY01000026.1 Protein Homology CDS 73928 74638 . - 0 ID=cds-WP_025302506.1;Parent=gene-IY40_RS16190;Dbxref=GenBank:WP_025302506.1;Name=WP_025302506.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004941137.1;locus_tag=IY40_RS16190;product=MurR/RpiR family transcriptional regulator;protein_id=WP_025302506.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 74875 75918 . + . ID=gene-IY40_RS16195;Name=potD;gbkey=Gene;gene=potD;gene_biotype=protein_coding;locus_tag=IY40_RS16195;old_locus_tag=IY40_16475 NZ_JPQY01000026.1 Protein Homology CDS 74875 75918 . + 0 ID=cds-WP_025302505.1;Parent=gene-IY40_RS16195;Dbxref=GenBank:WP_025302505.1;Name=WP_025302505.1;Ontology_term=GO:0015846,GO:0019808,GO:0042597;gbkey=CDS;gene=potD;go_component=periplasmic space|0042597||IEA;go_function=polyamine binding|0019808||IEA;go_process=polyamine transport|0015846||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121082.1;locus_tag=IY40_RS16195;product=spermidine/putrescine ABC transporter substrate-binding protein PotD;protein_id=WP_025302505.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 75967 76803 . - . ID=gene-IY40_RS16200;Name=cobB;gbkey=Gene;gene=cobB;gene_biotype=protein_coding;locus_tag=IY40_RS16200;old_locus_tag=IY40_16480 NZ_JPQY01000026.1 Protein Homology CDS 75967 76803 . - 0 ID=cds-WP_016928086.1;Parent=gene-IY40_RS16200;Dbxref=GenBank:WP_016928086.1;Name=WP_016928086.1;Ontology_term=GO:0070403;gbkey=CDS;gene=cobB;go_function=NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016928086.1;locus_tag=IY40_RS16200;product=Sir2 family NAD+-dependent deacetylase;protein_id=WP_016928086.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 76895 77812 . - . ID=gene-IY40_RS16205;Name=nagK;gbkey=Gene;gene=nagK;gene_biotype=protein_coding;locus_tag=IY40_RS16205;old_locus_tag=IY40_16485 NZ_JPQY01000026.1 Protein Homology CDS 76895 77812 . - 0 ID=cds-WP_043141509.1;Parent=gene-IY40_RS16205;Dbxref=GenBank:WP_043141509.1;Name=WP_043141509.1;Ontology_term=GO:0045127;gbkey=CDS;gene=nagK;go_function=N-acetylglucosamine kinase activity|0045127||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016928087.1;locus_tag=IY40_RS16205;product=N-acetylglucosamine kinase;protein_id=WP_043141509.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 77866 79113 . - . ID=gene-IY40_RS16210;Name=lolE;gbkey=Gene;gene=lolE;gene_biotype=protein_coding;locus_tag=IY40_RS16210;old_locus_tag=IY40_16490 NZ_JPQY01000026.1 Protein Homology CDS 77866 79113 . - 0 ID=cds-WP_025302503.1;Parent=gene-IY40_RS16210;Dbxref=GenBank:WP_025302503.1;Name=WP_025302503.1;Ontology_term=GO:0042953;gbkey=CDS;gene=lolE;go_process=lipoprotein transport|0042953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015377581.1;locus_tag=IY40_RS16210;product=lipoprotein-releasing ABC transporter permease subunit LolE;protein_id=WP_025302503.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 79113 79817 . - . ID=gene-IY40_RS16215;Name=lolD;gbkey=Gene;gene=lolD;gene_biotype=protein_coding;locus_tag=IY40_RS16215;old_locus_tag=IY40_16495 NZ_JPQY01000026.1 Protein Homology CDS 79113 79817 . - 0 ID=cds-WP_004941120.1;Parent=gene-IY40_RS16215;Dbxref=GenBank:WP_004941120.1;Name=WP_004941120.1;Ontology_term=GO:0042953,GO:0005524,GO:0016020;gbkey=CDS;gene=lolD;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA;go_process=lipoprotein transport|0042953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192588.1;locus_tag=IY40_RS16215;product=lipoprotein-releasing ABC transporter ATP-binding protein LolD;protein_id=WP_004941120.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 79810 81012 . - . ID=gene-IY40_RS16220;Name=lolC;gbkey=Gene;gene=lolC;gene_biotype=protein_coding;locus_tag=IY40_RS16220;old_locus_tag=IY40_16500 NZ_JPQY01000026.1 Protein Homology CDS 79810 81012 . - 0 ID=cds-WP_043141512.1;Parent=gene-IY40_RS16220;Dbxref=GenBank:WP_043141512.1;Name=WP_043141512.1;Ontology_term=GO:0042953,GO:0016020;gbkey=CDS;gene=lolC;go_component=membrane|0016020||IEA;go_process=lipoprotein transport|0042953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226297.1;locus_tag=IY40_RS16220;product=lipoprotein-releasing ABC transporter permease subunit LolC;protein_id=WP_043141512.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 81051 81311 . + . ID=gene-IY40_RS16225;Name=IY40_RS16225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS16225;old_locus_tag=IY40_16505 NZ_JPQY01000026.1 Protein Homology CDS 81051 81311 . + 0 ID=cds-WP_016928090.1;Parent=gene-IY40_RS16225;Dbxref=GenBank:WP_016928090.1;Name=WP_016928090.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019454785.1;locus_tag=IY40_RS16225;product=hypothetical protein;protein_id=WP_016928090.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 81322 84795 . + . ID=gene-IY40_RS16230;Name=mfd;gbkey=Gene;gene=mfd;gene_biotype=protein_coding;locus_tag=IY40_RS16230;old_locus_tag=IY40_16510 NZ_JPQY01000026.1 Protein Homology CDS 81322 84795 . + 0 ID=cds-WP_043141515.1;Parent=gene-IY40_RS16230;Dbxref=GenBank:WP_043141515.1;Name=WP_043141515.1;Ontology_term=GO:0006281,GO:0003676,GO:0003684,GO:0005524;gbkey=CDS;gene=mfd;go_function=nucleic acid binding|0003676||IEA,damaged DNA binding|0003684||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004943242.1;locus_tag=IY40_RS16230;product=transcription-repair coupling factor;protein_id=WP_043141515.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 84828 85928 . - . ID=gene-IY40_RS16235;Name=IY40_RS16235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS16235;old_locus_tag=IY40_16515 NZ_JPQY01000026.1 Protein Homology CDS 84828 85928 . - 0 ID=cds-WP_043141520.1;Parent=gene-IY40_RS16235;Dbxref=GenBank:WP_043141520.1;Name=WP_043141520.1;Ontology_term=GO:0005525,GO:0046872,GO:0052621,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=GTP binding|0005525||IEA,metal ion binding|0046872||IEA,diguanylate cyclase activity|0052621||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019454783.1;locus_tag=IY40_RS16235;product=GGDEF domain-containing protein;protein_id=WP_043141520.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 86127 86612 . + . ID=gene-IY40_RS16240;Name=IY40_RS16240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS16240;old_locus_tag=IY40_16520 NZ_JPQY01000026.1 Protein Homology CDS 86127 86612 . + 0 ID=cds-WP_025302499.1;Parent=gene-IY40_RS16240;Dbxref=GenBank:WP_025302499.1;Name=WP_025302499.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012006420.1;locus_tag=IY40_RS16240;product=heme-degrading domain-containing protein;protein_id=WP_025302499.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 86845 88533 . + . ID=gene-IY40_RS16245;Name=dauA;gbkey=Gene;gene=dauA;gene_biotype=protein_coding;locus_tag=IY40_RS16245;old_locus_tag=IY40_16525 NZ_JPQY01000026.1 Protein Homology CDS 86845 88533 . + 0 ID=cds-WP_043141525.1;Parent=gene-IY40_RS16245;Dbxref=GenBank:WP_043141525.1;Name=WP_043141525.1;gbkey=CDS;gene=dauA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004943236.1;locus_tag=IY40_RS16245;product=C4-dicarboxylic acid transporter DauA;protein_id=WP_043141525.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 88579 89433 . - . ID=gene-IY40_RS16250;Name=kdsA;gbkey=Gene;gene=kdsA;gene_biotype=protein_coding;locus_tag=IY40_RS16250;old_locus_tag=IY40_16530 NZ_JPQY01000026.1 Protein Homology CDS 88579 89433 . - 0 ID=cds-WP_043141843.1;Parent=gene-IY40_RS16250;Dbxref=GenBank:WP_043141843.1;Name=WP_043141843.1;Ontology_term=GO:0008676;gbkey=CDS;gene=kdsA;go_function=3-deoxy-8-phosphooctulonate synthase activity|0008676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012006418.1;locus_tag=IY40_RS16250;product=3-deoxy-8-phosphooctulonate synthase;protein_id=WP_043141843.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 89492 90301 . - . ID=gene-IY40_RS16255;Name=sirB1;gbkey=Gene;gene=sirB1;gene_biotype=protein_coding;locus_tag=IY40_RS16255;old_locus_tag=IY40_16535 NZ_JPQY01000026.1 Protein Homology CDS 89492 90301 . - 0 ID=cds-WP_016928096.1;Parent=gene-IY40_RS16255;Dbxref=GenBank:WP_016928096.1;Name=WP_016928096.1;gbkey=CDS;gene=sirB1;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016256500.1;locus_tag=IY40_RS16255;product=invasion regulator SirB1;protein_id=WP_016928096.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 90298 90699 . - . ID=gene-IY40_RS16260;Name=IY40_RS16260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS16260;old_locus_tag=IY40_16540 NZ_JPQY01000026.1 Protein Homology CDS 90298 90699 . - 0 ID=cds-WP_170310367.1;Parent=gene-IY40_RS16260;Dbxref=GenBank:WP_170310367.1;Name=WP_170310367.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005169111.1;locus_tag=IY40_RS16260;product=SirB2 family protein;protein_id=WP_170310367.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 90741 91574 . - . ID=gene-IY40_RS16265;Name=prmC;gbkey=Gene;gene=prmC;gene_biotype=protein_coding;locus_tag=IY40_RS16265;old_locus_tag=IY40_16545 NZ_JPQY01000026.1 Protein Homology CDS 90741 91574 . - 0 ID=cds-WP_043141530.1;Parent=gene-IY40_RS16265;Dbxref=GenBank:WP_043141530.1;Name=WP_043141530.1;Ontology_term=GO:0006412,GO:0018364,GO:0008757;gbkey=CDS;gene=prmC;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=translation|0006412||IEA,peptidyl-glutamine methylation|0018364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015377574.1;locus_tag=IY40_RS16265;product=peptide chain release factor N(5)-glutamine methyltransferase;protein_id=WP_043141530.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 91574 92659 . - . ID=gene-IY40_RS16270;Name=prfA;gbkey=Gene;gene=prfA;gene_biotype=protein_coding;locus_tag=IY40_RS16270;old_locus_tag=IY40_16550 NZ_JPQY01000026.1 Protein Homology CDS 91574 92659 . - 0 ID=cds-WP_016928099.1;Parent=gene-IY40_RS16270;Dbxref=GenBank:WP_016928099.1;Name=WP_016928099.1;Ontology_term=GO:0006415,GO:0003747;gbkey=CDS;gene=prfA;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007868426.1;locus_tag=IY40_RS16270;product=peptide chain release factor 1;protein_id=WP_016928099.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 92691 93953 . - . ID=gene-IY40_RS16275;Name=hemA;gbkey=Gene;gene=hemA;gene_biotype=protein_coding;locus_tag=IY40_RS16275;old_locus_tag=IY40_16555 NZ_JPQY01000026.1 Protein Homology CDS 92691 93953 . - 0 ID=cds-WP_025302494.1;Parent=gene-IY40_RS16275;Dbxref=GenBank:WP_025302494.1;Name=WP_025302494.1;Ontology_term=GO:0008883,GO:0050661;gbkey=CDS;gene=hemA;go_function=glutamyl-tRNA reductase activity|0008883||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012006413.1;locus_tag=IY40_RS16275;product=glutamyl-tRNA reductase;protein_id=WP_025302494.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 94421 95044 . + . ID=gene-IY40_RS16280;Name=lolB;gbkey=Gene;gene=lolB;gene_biotype=protein_coding;locus_tag=IY40_RS16280;old_locus_tag=IY40_16560 NZ_JPQY01000026.1 Protein Homology CDS 94421 95044 . + 0 ID=cds-WP_043141534.1;Parent=gene-IY40_RS16280;Dbxref=GenBank:WP_043141534.1;Name=WP_043141534.1;Ontology_term=GO:0015031,GO:0009279;gbkey=CDS;gene=lolB;go_component=cell outer membrane|0009279||IEA;go_process=protein transport|0015031||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016583171.1;locus_tag=IY40_RS16280;product=lipoprotein insertase outer membrane protein LolB;protein_id=WP_043141534.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 95041 95907 . + . ID=gene-IY40_RS16285;Name=ispE;gbkey=Gene;gene=ispE;gene_biotype=protein_coding;locus_tag=IY40_RS16285;old_locus_tag=IY40_16565 NZ_JPQY01000026.1 Protein Homology CDS 95041 95907 . + 0 ID=cds-WP_043141536.1;Parent=gene-IY40_RS16285;Dbxref=GenBank:WP_043141536.1;Name=WP_043141536.1;Ontology_term=GO:0016114,GO:0050515;gbkey=CDS;gene=ispE;go_function=4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity|0050515||IEA;go_process=terpenoid biosynthetic process|0016114||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004941065.1;locus_tag=IY40_RS16285;product=4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase;protein_id=WP_043141536.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 96082 97029 . + . ID=gene-IY40_RS16290;Name=prs;gbkey=Gene;gene=prs;gene_biotype=protein_coding;locus_tag=IY40_RS16290;old_locus_tag=IY40_16570 NZ_JPQY01000026.1 Protein Homology CDS 96082 97029 . + 0 ID=cds-WP_004941061.1;Parent=gene-IY40_RS16290;Dbxref=GenBank:WP_004941061.1;Name=WP_004941061.1;gbkey=CDS;gene=prs;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002910407.1;locus_tag=IY40_RS16290;product=ribose-phosphate diphosphokinase;protein_id=WP_004941061.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 97215 97493 . - . ID=gene-IY40_RS16295;Name=ychH;gbkey=Gene;gene=ychH;gene_biotype=protein_coding;locus_tag=IY40_RS16295;old_locus_tag=IY40_16575 NZ_JPQY01000026.1 Protein Homology CDS 97215 97493 . - 0 ID=cds-WP_025302491.1;Parent=gene-IY40_RS16295;Dbxref=GenBank:WP_025302491.1;Name=WP_025302491.1;gbkey=CDS;gene=ychH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012006409.1;locus_tag=IY40_RS16295;product=stress-induced protein YchH;protein_id=WP_025302491.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 97795 98385 . + . ID=gene-IY40_RS16300;Name=pth;gbkey=Gene;gene=pth;gene_biotype=protein_coding;locus_tag=IY40_RS16300;old_locus_tag=IY40_16580 NZ_JPQY01000026.1 Protein Homology CDS 97795 98385 . + 0 ID=cds-WP_004941053.1;Parent=gene-IY40_RS16300;Dbxref=GenBank:WP_004941053.1;Name=WP_004941053.1;Ontology_term=GO:0004045;gbkey=CDS;gene=pth;go_function=peptidyl-tRNA hydrolase activity|0004045||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017892485.1;locus_tag=IY40_RS16300;product=aminoacyl-tRNA hydrolase;protein_id=WP_004941053.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 98423 99952 . - . ID=gene-IY40_RS16305;Name=IY40_RS16305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS16305;old_locus_tag=IY40_16585 NZ_JPQY01000026.1 Protein Homology CDS 98423 99952 . - 0 ID=cds-WP_025302490.1;Parent=gene-IY40_RS16305;Dbxref=GenBank:WP_025302490.1;Name=WP_025302490.1;Ontology_term=GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019454771.1;locus_tag=IY40_RS16305;product=SulP family inorganic anion transporter;protein_id=WP_025302490.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 100287 101378 . + . ID=gene-IY40_RS16310;Name=ychF;gbkey=Gene;gene=ychF;gene_biotype=protein_coding;locus_tag=IY40_RS16310;old_locus_tag=IY40_16590 NZ_JPQY01000026.1 Protein Homology CDS 100287 101378 . + 0 ID=cds-WP_025302489.1;Parent=gene-IY40_RS16310;Dbxref=GenBank:WP_025302489.1;Name=WP_025302489.1;Ontology_term=GO:0005524,GO:0005525,GO:0016887;gbkey=CDS;gene=ychF;go_function=ATP binding|0005524||IEA,GTP binding|0005525||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001538644.1;locus_tag=IY40_RS16310;product=redox-regulated ATPase YchF;protein_id=WP_025302489.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 101678 102262 . + . ID=gene-IY40_RS16315;Name=IY40_RS16315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS16315;old_locus_tag=IY40_16595 NZ_JPQY01000026.1 Protein Homology CDS 101678 102262 . + 0 ID=cds-WP_025302488.1;Parent=gene-IY40_RS16315;Dbxref=GenBank:WP_025302488.1;Name=WP_025302488.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016928107.1;locus_tag=IY40_RS16315;product=TetR/AcrR family transcriptional regulator;protein_id=WP_025302488.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 103180 104346 . + . ID=gene-IY40_RS16320;Name=IY40_RS16320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS16320 NZ_JPQY01000026.1 Protein Homology CDS 103180 104346 . + 0 ID=cds-WP_233494390.1;Parent=gene-IY40_RS16320;Dbxref=GenBank:WP_233494390.1;Name=WP_233494390.1;Ontology_term=GO:0055085,GO:0022857,GO:0042802,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA,identical protein binding|0042802||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020079055.1;locus_tag=IY40_RS16320;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_233494390.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 104357 107683 . + . ID=gene-IY40_RS16325;Name=IY40_RS16325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS16325 NZ_JPQY01000026.1 Protein Homology CDS 104357 107683 . + 0 ID=cds-WP_043141540.1;Parent=gene-IY40_RS16325;Dbxref=GenBank:WP_043141540.1;Name=WP_043141540.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020079056.1;locus_tag=IY40_RS16325;product=efflux RND transporter permease subunit;protein_id=WP_043141540.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 107738 108166 . - . ID=gene-IY40_RS16330;Name=IY40_RS16330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS16330;old_locus_tag=IY40_16610 NZ_JPQY01000026.1 Protein Homology CDS 107738 108166 . - 0 ID=cds-WP_043141542.1;Parent=gene-IY40_RS16330;Dbxref=GenBank:WP_043141542.1;Name=WP_043141542.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019454768.1;locus_tag=IY40_RS16330;product=tautomerase family protein;protein_id=WP_043141542.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 108322 108822 . + . ID=gene-IY40_RS16335;Name=IY40_RS16335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS16335;old_locus_tag=IY40_16615 NZ_JPQY01000026.1 Protein Homology CDS 108322 108822 . + 0 ID=cds-WP_043141544.1;Parent=gene-IY40_RS16335;Dbxref=GenBank:WP_043141544.1;Name=WP_043141544.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004941032.1;locus_tag=IY40_RS16335;product=winged helix-turn-helix transcriptional regulator;protein_id=WP_043141544.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 108824 109507 . - . ID=gene-IY40_RS16340;Name=IY40_RS16340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS16340;old_locus_tag=IY40_16620 NZ_JPQY01000026.1 Protein Homology CDS 108824 109507 . - 0 ID=cds-WP_230203365.1;Parent=gene-IY40_RS16340;Dbxref=GenBank:WP_230203365.1;Name=WP_230203365.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015377564.1;locus_tag=IY40_RS16340;product=helix-turn-helix transcriptional regulator;protein_id=WP_230203365.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 109883 110416 . + . ID=gene-IY40_RS16345;Name=IY40_RS16345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS16345;old_locus_tag=IY40_16625 NZ_JPQY01000026.1 Protein Homology CDS 109883 110416 . + 0 ID=cds-WP_043141548.1;Parent=gene-IY40_RS16345;Dbxref=GenBank:WP_043141548.1;Name=WP_043141548.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015377562.1;locus_tag=IY40_RS16345;product=fimbrial protein;protein_id=WP_043141548.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 110476 111228 . + . ID=gene-IY40_RS16350;Name=IY40_RS16350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS16350;old_locus_tag=IY40_16630 NZ_JPQY01000026.1 Protein Homology CDS 110476 111228 . + 0 ID=cds-WP_225735568.1;Parent=gene-IY40_RS16350;Dbxref=GenBank:WP_225735568.1;Name=WP_225735568.1;Ontology_term=GO:0006457,GO:0043711,GO:0030288;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_process=protein folding|0006457||IEA,pilus organization|0043711||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004941024.1;locus_tag=IY40_RS16350;product=fimbrial biogenesis chaperone;protein_id=WP_225735568.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 111249 113780 . + . ID=gene-IY40_RS16355;Name=IY40_RS16355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS16355;old_locus_tag=IY40_16635 NZ_JPQY01000026.1 Protein Homology CDS 111249 113780 . + 0 ID=cds-WP_043141554.1;Parent=gene-IY40_RS16355;Dbxref=GenBank:WP_043141554.1;Name=WP_043141554.1;Ontology_term=GO:0009297,GO:0015473,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=fimbrial usher porin activity|0015473||IEA;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004941022.1;locus_tag=IY40_RS16355;product=fimbria/pilus outer membrane usher protein;protein_id=WP_043141554.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 113809 115149 . + . ID=gene-IY40_RS16360;Name=IY40_RS16360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS16360;old_locus_tag=IY40_16640 NZ_JPQY01000026.1 Protein Homology CDS 113809 115149 . + 0 ID=cds-WP_038629212.1;Parent=gene-IY40_RS16360;Dbxref=GenBank:WP_038629212.1;Name=WP_038629212.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016928116.1;locus_tag=IY40_RS16360;product=fimbrial protein;protein_id=WP_038629212.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 115146 115898 . + . ID=gene-IY40_RS16365;Name=IY40_RS16365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS16365;old_locus_tag=IY40_16645 NZ_JPQY01000026.1 Protein Homology CDS 115146 115898 . + 0 ID=cds-WP_233492609.1;Parent=gene-IY40_RS16365;Dbxref=GenBank:WP_233492609.1;Name=WP_233492609.1;Ontology_term=GO:0006457,GO:0043711,GO:0030288;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_process=protein folding|0006457||IEA,pilus organization|0043711||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019454761.1;locus_tag=IY40_RS16365;product=fimbrial biogenesis chaperone;protein_id=WP_233492609.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 115943 116809 . + . ID=gene-IY40_RS16370;Name=IY40_RS16370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS16370;old_locus_tag=IY40_16650 NZ_JPQY01000026.1 Protein Homology CDS 115943 116809 . + 0 ID=cds-WP_043141563.1;Parent=gene-IY40_RS16370;Dbxref=GenBank:WP_043141563.1;Name=WP_043141563.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015377557.1;locus_tag=IY40_RS16370;product=hypothetical protein;protein_id=WP_043141563.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 116815 117408 . - . ID=gene-IY40_RS16375;Name=IY40_RS16375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS16375;old_locus_tag=IY40_16655 NZ_JPQY01000026.1 Protein Homology CDS 116815 117408 . - 0 ID=cds-WP_043141566.1;Parent=gene-IY40_RS16375;Dbxref=GenBank:WP_043141566.1;Name=WP_043141566.1;Ontology_term=GO:0006508,GO:0004176,GO:0004252;gbkey=CDS;go_function=ATP-dependent peptidase activity|0004176||IEA,serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004943194.1;locus_tag=IY40_RS16375;product=ATP-dependent Clp protease proteolytic subunit;protein_id=WP_043141566.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 117454 117783 . - . ID=gene-IY40_RS16380;Name=IY40_RS16380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS16380;old_locus_tag=IY40_16660 NZ_JPQY01000026.1 Protein Homology CDS 117454 117783 . - 0 ID=cds-WP_043141569.1;Parent=gene-IY40_RS16380;Dbxref=GenBank:WP_043141569.1;Name=WP_043141569.1;Ontology_term=GO:0005488;gbkey=CDS;go_function=binding|0005488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004941010.1;locus_tag=IY40_RS16380;product=SRPBCC family protein;protein_id=WP_043141569.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 117780 118094 . - . ID=gene-IY40_RS16385;Name=IY40_RS16385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS16385;old_locus_tag=IY40_16665 NZ_JPQY01000026.1 Protein Homology CDS 117780 118094 . - 0 ID=cds-WP_043141571.1;Parent=gene-IY40_RS16385;Dbxref=GenBank:WP_043141571.1;Name=WP_043141571.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012006400.1;locus_tag=IY40_RS16385;product=ArsR/SmtB family transcription factor;protein_id=WP_043141571.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 118199 119701 . - . ID=gene-IY40_RS16390;Name=IY40_RS16390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS16390;old_locus_tag=IY40_16670 NZ_JPQY01000026.1 Protein Homology CDS 118199 119701 . - 0 ID=cds-WP_043141573.1;Parent=gene-IY40_RS16390;Dbxref=GenBank:WP_043141573.1;Name=WP_043141573.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004941005.1;locus_tag=IY40_RS16390;product=amino acid permease;protein_id=WP_043141573.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 119760 120212 . - . ID=gene-IY40_RS16395;Name=IY40_RS16395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS16395;old_locus_tag=IY40_16675 NZ_JPQY01000026.1 Protein Homology CDS 119760 120212 . - 0 ID=cds-WP_043141575.1;Parent=gene-IY40_RS16395;Dbxref=GenBank:WP_043141575.1;Name=WP_043141575.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001592724.1;locus_tag=IY40_RS16395;product=beta-galactosidase subunit beta;protein_id=WP_043141575.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 120209 123298 . - . ID=gene-IY40_RS16400;Name=ebgA;gbkey=Gene;gene=ebgA;gene_biotype=protein_coding;locus_tag=IY40_RS16400;old_locus_tag=IY40_16680 NZ_JPQY01000026.1 Protein Homology CDS 120209 123298 . - 0 ID=cds-WP_043141578.1;Parent=gene-IY40_RS16400;Dbxref=GenBank:WP_043141578.1;Name=WP_043141578.1;Ontology_term=GO:0004565;gbkey=CDS;gene=ebgA;go_function=beta-galactosidase activity|0004565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004940999.1;locus_tag=IY40_RS16400;product=beta-galactosidase subunit alpha;protein_id=WP_043141578.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 123466 124446 . - . ID=gene-IY40_RS16405;Name=ebgR;gbkey=Gene;gene=ebgR;gene_biotype=protein_coding;locus_tag=IY40_RS16405;old_locus_tag=IY40_16685 NZ_JPQY01000026.1 Protein Homology CDS 123466 124446 . - 0 ID=cds-WP_043141580.1;Parent=gene-IY40_RS16405;Dbxref=GenBank:WP_043141580.1;Name=WP_043141580.1;gbkey=CDS;gene=ebgR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012006396.1;locus_tag=IY40_RS16405;product=transcriptional regulator EbgR;protein_id=WP_043141580.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 124784 125854 . + . ID=gene-IY40_RS16410;Name=ygjJ;gbkey=Gene;gene=ygjJ;gene_biotype=protein_coding;locus_tag=IY40_RS16410;old_locus_tag=IY40_16690 NZ_JPQY01000026.1 Protein Homology CDS 124784 125854 . + 0 ID=cds-WP_043141581.1;Parent=gene-IY40_RS16410;Dbxref=GenBank:WP_043141581.1;Name=WP_043141581.1;gbkey=CDS;gene=ygjJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019454752.1;locus_tag=IY40_RS16410;product=protein YgjJ;protein_id=WP_043141581.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 125872 128235 . + . ID=gene-IY40_RS16415;Name=ygjK;gbkey=Gene;gene=ygjK;gene_biotype=protein_coding;locus_tag=IY40_RS16415;old_locus_tag=IY40_16695 NZ_JPQY01000026.1 Protein Homology CDS 125872 128235 . + 0 ID=cds-WP_043141583.1;Parent=gene-IY40_RS16415;Dbxref=GenBank:WP_043141583.1;Name=WP_043141583.1;Ontology_term=GO:0005991,GO:0004555;gbkey=CDS;gene=ygjK;go_function=alpha%2Calpha-trehalase activity|0004555||IEA;go_process=trehalose metabolic process|0005991||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015377549.1;locus_tag=IY40_RS16415;product=alpha-glucosidase;protein_id=WP_043141583.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 128279 128704 . - . ID=gene-IY40_RS16420;Name=IY40_RS16420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS16420;old_locus_tag=IY40_16700 NZ_JPQY01000026.1 Protein Homology CDS 128279 128704 . - 0 ID=cds-WP_025302472.1;Parent=gene-IY40_RS16420;Dbxref=GenBank:WP_025302472.1;Name=WP_025302472.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004940992.1;locus_tag=IY40_RS16420;product=universal stress protein;protein_id=WP_025302472.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 128851 129369 . - . ID=gene-IY40_RS16425;Name=IY40_RS16425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS16425;old_locus_tag=IY40_16705 NZ_JPQY01000026.1 Protein Homology CDS 128851 129369 . - 0 ID=cds-WP_025302471.1;Parent=gene-IY40_RS16425;Dbxref=GenBank:WP_025302471.1;Name=WP_025302471.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019454749.1;locus_tag=IY40_RS16425;product=hypothetical protein;protein_id=WP_025302471.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 129606 130421 . + . ID=gene-IY40_RS16430;Name=metQ;gbkey=Gene;gene=metQ;gene_biotype=protein_coding;locus_tag=IY40_RS16430;old_locus_tag=IY40_16710 NZ_JPQY01000026.1 Protein Homology CDS 129606 130421 . + 0 ID=cds-WP_043141591.1;Parent=gene-IY40_RS16430;Dbxref=GenBank:WP_043141591.1;Name=WP_043141591.1;gbkey=CDS;gene=metQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016534993.1;locus_tag=IY40_RS16430;product=methionine ABC transporter substrate-binding lipoprotein MetQ;protein_id=WP_043141591.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 130468 131232 . - . ID=gene-IY40_RS16435;Name=IY40_RS16435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS16435;old_locus_tag=IY40_16715 NZ_JPQY01000026.1 Protein Homology CDS 130468 131232 . - 0 ID=cds-WP_043141594.1;Parent=gene-IY40_RS16435;Dbxref=GenBank:WP_043141594.1;Name=WP_043141594.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019454747.1;locus_tag=IY40_RS16435;product=SDR family oxidoreductase;protein_id=WP_043141594.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 131372 132292 . - . ID=gene-IY40_RS16440;Name=IY40_RS16440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS16440;old_locus_tag=IY40_16720 NZ_JPQY01000026.1 Protein Homology CDS 131372 132292 . - 0 ID=cds-WP_043141597.1;Parent=gene-IY40_RS16440;Dbxref=GenBank:WP_043141597.1;Name=WP_043141597.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019454746.1;locus_tag=IY40_RS16440;product=sugar ABC transporter substrate-binding protein;protein_id=WP_043141597.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 132358 133398 . - . ID=gene-IY40_RS16445;Name=IY40_RS16445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS16445;old_locus_tag=IY40_16725 NZ_JPQY01000026.1 Protein Homology CDS 132358 133398 . - 0 ID=cds-WP_043141845.1;Parent=gene-IY40_RS16445;Dbxref=GenBank:WP_043141845.1;Name=WP_043141845.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004943164.1;locus_tag=IY40_RS16445;product=ABC transporter permease;protein_id=WP_043141845.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 133414 134898 . - . ID=gene-IY40_RS16450;Name=IY40_RS16450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS16450;old_locus_tag=IY40_16730 NZ_JPQY01000026.1 Protein Homology CDS 133414 134898 . - 0 ID=cds-WP_025302466.1;Parent=gene-IY40_RS16450;Dbxref=GenBank:WP_025302466.1;Name=WP_025302466.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004706480.1;locus_tag=IY40_RS16450;product=sugar ABC transporter ATP-binding protein;protein_id=WP_025302466.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 134974 135903 . - . ID=gene-IY40_RS16455;Name=IY40_RS16455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS16455;old_locus_tag=IY40_16735 NZ_JPQY01000026.1 Protein Homology CDS 134974 135903 . - 0 ID=cds-WP_025302465.1;Parent=gene-IY40_RS16455;Dbxref=GenBank:WP_025302465.1;Name=WP_025302465.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004858977.1;locus_tag=IY40_RS16455;product=sugar ABC transporter substrate-binding protein;protein_id=WP_025302465.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 136388 137230 . + . ID=gene-IY40_RS16460;Name=IY40_RS16460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS16460;old_locus_tag=IY40_16740 NZ_JPQY01000026.1 Protein Homology CDS 136388 137230 . + 0 ID=cds-WP_025302464.1;Parent=gene-IY40_RS16460;Dbxref=GenBank:WP_025302464.1;Name=WP_025302464.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015377543.1;locus_tag=IY40_RS16460;product=class I fructose-bisphosphate aldolase;protein_id=WP_025302464.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 137356 138969 . + . ID=gene-IY40_RS16465;Name=IY40_RS16465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS16465;old_locus_tag=IY40_16745 NZ_JPQY01000026.1 Protein Homology CDS 137356 138969 . + 0 ID=cds-WP_043141600.1;Parent=gene-IY40_RS16465;Dbxref=GenBank:WP_043141600.1;Name=WP_043141600.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016928129.1;locus_tag=IY40_RS16465;product=sensor histidine kinase;protein_id=WP_043141600.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 138962 139681 . + . ID=gene-IY40_RS16470;Name=dcuR;gbkey=Gene;gene=dcuR;gene_biotype=protein_coding;locus_tag=IY40_RS16470;old_locus_tag=IY40_16750 NZ_JPQY01000026.1 Protein Homology CDS 138962 139681 . + 0 ID=cds-WP_004940959.1;Parent=gene-IY40_RS16470;Dbxref=GenBank:WP_004940959.1;Name=WP_004940959.1;Ontology_term=GO:0000160,GO:0003700;gbkey=CDS;gene=dcuR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016928130.1;locus_tag=IY40_RS16470;product=two-component system response regulator DcuR;protein_id=WP_004940959.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 139719 140054 . - . ID=gene-IY40_RS16475;Name=IY40_RS16475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS16475;old_locus_tag=IY40_16755 NZ_JPQY01000026.1 Protein Homology CDS 139719 140054 . - 0 ID=cds-WP_043141604.1;Parent=gene-IY40_RS16475;Dbxref=GenBank:WP_043141604.1;Name=WP_043141604.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004940957.1;locus_tag=IY40_RS16475;product=hypothetical protein;protein_id=WP_043141604.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 140088 140513 . - . ID=gene-IY40_RS16480;Name=IY40_RS16480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS16480;old_locus_tag=IY40_16760 NZ_JPQY01000026.1 GeneMarkS-2+ CDS 140088 140513 . - 0 ID=cds-WP_025302461.1;Parent=gene-IY40_RS16480;Dbxref=GenBank:WP_025302461.1;Name=WP_025302461.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IY40_RS16480;product=hypothetical protein;protein_id=WP_025302461.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 140575 140874 . - . ID=gene-IY40_RS16485;Name=IY40_RS16485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS16485;old_locus_tag=IY40_16765 NZ_JPQY01000026.1 Protein Homology CDS 140575 140874 . - 0 ID=cds-WP_043141607.1;Parent=gene-IY40_RS16485;Dbxref=GenBank:WP_043141607.1;Name=WP_043141607.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004940954.1;locus_tag=IY40_RS16485;product=hypothetical protein;protein_id=WP_043141607.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 141045 141284 . - . ID=gene-IY40_RS25385;Name=IY40_RS25385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS25385 NZ_JPQY01000026.1 Protein Homology CDS 141045 141284 . - 0 ID=cds-WP_072008265.1;Parent=gene-IY40_RS25385;Dbxref=GenBank:WP_072008265.1;Name=WP_072008265.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016928133.1;locus_tag=IY40_RS25385;product=hypothetical protein;protein_id=WP_072008265.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 141512 141727 . - . ID=gene-IY40_RS16490;Name=IY40_RS16490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS16490;old_locus_tag=IY40_16770 NZ_JPQY01000026.1 Protein Homology CDS 141512 141727 . - 0 ID=cds-WP_025302459.1;Parent=gene-IY40_RS16490;Dbxref=GenBank:WP_025302459.1;Name=WP_025302459.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011147794.1;locus_tag=IY40_RS16490;product=helix-turn-helix domain-containing protein;protein_id=WP_025302459.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 141735 142298 . - . ID=gene-IY40_RS16495;Name=IY40_RS16495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS16495;old_locus_tag=IY40_16775 NZ_JPQY01000026.1 Protein Homology CDS 141735 142298 . - 0 ID=cds-WP_025302458.1;Parent=gene-IY40_RS16495;Dbxref=GenBank:WP_025302458.1;Name=WP_025302458.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013812477.1;locus_tag=IY40_RS16495;product=DUF2975 domain-containing protein;protein_id=WP_025302458.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 142456 143655 . - . ID=gene-IY40_RS16500;Name=fabV;gbkey=Gene;gene=fabV;gene_biotype=protein_coding;locus_tag=IY40_RS16500;old_locus_tag=IY40_16780 NZ_JPQY01000026.1 Protein Homology CDS 142456 143655 . - 0 ID=cds-WP_025302456.1;Parent=gene-IY40_RS16500;Dbxref=GenBank:WP_025302456.1;Name=WP_025302456.1;Ontology_term=GO:0006633,GO:0004318;gbkey=CDS;gene=fabV;go_function=enoyl-[acyl-carrier-protein] reductase (NADH) activity|0004318||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006316718.1;locus_tag=IY40_RS16500;product=enoyl-ACP reductase FabV;protein_id=WP_025302456.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 143825 144175 . - . ID=gene-IY40_RS16505;Name=IY40_RS16505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS16505;old_locus_tag=IY40_16785 NZ_JPQY01000026.1 Protein Homology CDS 143825 144175 . - 0 ID=cds-WP_043141612.1;Parent=gene-IY40_RS16505;Dbxref=GenBank:WP_043141612.1;Name=WP_043141612.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019454731.1;locus_tag=IY40_RS16505;product=DUF4377 domain-containing protein;protein_id=WP_043141612.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 144311 144718 . - . ID=gene-IY40_RS16510;Name=IY40_RS16510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS16510;old_locus_tag=IY40_16790 NZ_JPQY01000026.1 Protein Homology CDS 144311 144718 . - 0 ID=cds-WP_043141614.1;Parent=gene-IY40_RS16510;Dbxref=GenBank:WP_043141614.1;Name=WP_043141614.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019454728.1;locus_tag=IY40_RS16510;product=hypothetical protein;protein_id=WP_043141614.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 145326 146135 . + . ID=gene-IY40_RS26035;Name=IY40_RS26035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS26035 NZ_JPQY01000026.1 GeneMarkS-2+ CDS 145326 146135 . + 0 ID=cds-WP_151428425.1;Parent=gene-IY40_RS26035;Dbxref=GenBank:WP_151428425.1;Name=WP_151428425.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IY40_RS26035;product=hypothetical protein;protein_id=WP_151428425.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 146375 146533 . - . ID=gene-IY40_RS26685;Name=IY40_RS26685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS26685 NZ_JPQY01000026.1 Protein Homology CDS 146375 146533 . - 0 ID=cds-WP_225735565.1;Parent=gene-IY40_RS26685;Dbxref=GenBank:WP_225735565.1;Name=WP_225735565.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018772.6;locus_tag=IY40_RS26685;product=DUF1367 family protein;protein_id=WP_225735565.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 147416 147757 . - . ID=gene-IY40_RS16525;Name=IY40_RS16525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS16525;old_locus_tag=IY40_16810 NZ_JPQY01000026.1 Protein Homology CDS 147416 147757 . - 0 ID=cds-WP_025302452.1;Parent=gene-IY40_RS16525;Dbxref=GenBank:WP_025302452.1;Name=WP_025302452.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013812467.1;locus_tag=IY40_RS16525;product=YebY family protein;protein_id=WP_025302452.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 147827 148708 . - . ID=gene-IY40_RS16530;Name=copD;gbkey=Gene;gene=copD;gene_biotype=protein_coding;locus_tag=IY40_RS16530;old_locus_tag=IY40_16815 NZ_JPQY01000026.1 Protein Homology CDS 147827 148708 . - 0 ID=cds-WP_043141616.1;Parent=gene-IY40_RS16530;Dbxref=GenBank:WP_043141616.1;Name=WP_043141616.1;Ontology_term=GO:0006825,GO:0016020;gbkey=CDS;gene=copD;go_component=membrane|0016020||IEA;go_process=copper ion transport|0006825||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017892444.1;locus_tag=IY40_RS16530;product=copper homeostasis membrane protein CopD;protein_id=WP_043141616.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 148711 149094 . - . ID=gene-IY40_RS16535;Name=yobA;gbkey=Gene;gene=yobA;gene_biotype=protein_coding;locus_tag=IY40_RS16535;old_locus_tag=IY40_16820 NZ_JPQY01000026.1 Protein Homology CDS 148711 149094 . - 0 ID=cds-WP_043141618.1;Parent=gene-IY40_RS16535;Dbxref=GenBank:WP_043141618.1;Name=WP_043141618.1;Ontology_term=GO:0006825,GO:0046688,GO:0005507;gbkey=CDS;gene=yobA;go_function=copper ion binding|0005507||IEA;go_process=copper ion transport|0006825||IEA,response to copper ion|0046688||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004943122.1;locus_tag=IY40_RS16535;product=CopC domain-containing protein YobA;protein_id=WP_043141618.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 149419 149937 . - . ID=gene-IY40_RS16540;Name=ftnA;gbkey=Gene;gene=ftnA;gene_biotype=protein_coding;locus_tag=IY40_RS16540;old_locus_tag=IY40_16825 NZ_JPQY01000026.1 Protein Homology CDS 149419 149937 . - 0 ID=cds-WP_025302449.1;Parent=gene-IY40_RS16540;Dbxref=GenBank:WP_025302449.1;Name=WP_025302449.1;Ontology_term=GO:0006879,GO:0008199;gbkey=CDS;gene=ftnA;go_function=ferric iron binding|0008199||IEA;go_process=intracellular iron ion homeostasis|0006879||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015377481.1;locus_tag=IY40_RS16540;product=non-heme ferritin;protein_id=WP_025302449.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 150282 150512 . + . ID=gene-IY40_RS16545;Name=IY40_RS16545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS16545;old_locus_tag=IY40_16830 NZ_JPQY01000026.1 Protein Homology CDS 150282 150512 . + 0 ID=cds-WP_043141621.1;Parent=gene-IY40_RS16545;Dbxref=GenBank:WP_043141621.1;Name=WP_043141621.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211091.1;locus_tag=IY40_RS16545;product=DNA polymerase III subunit theta;protein_id=WP_043141621.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 150543 151496 . - . ID=gene-IY40_RS16550;Name=pip;gbkey=Gene;gene=pip;gene_biotype=protein_coding;locus_tag=IY40_RS16550;old_locus_tag=IY40_16835 NZ_JPQY01000026.1 Protein Homology CDS 150543 151496 . - 0 ID=cds-WP_043141848.1;Parent=gene-IY40_RS16550;Dbxref=GenBank:WP_043141848.1;Name=WP_043141848.1;Ontology_term=GO:0030163,GO:0004177,GO:0005737;gbkey=CDS;gene=pip;go_component=cytoplasm|0005737||IEA;go_function=aminopeptidase activity|0004177||IEA;go_process=protein catabolic process|0030163||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004943115.1;locus_tag=IY40_RS16550;product=prolyl aminopeptidase;protein_id=WP_043141848.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 151653 152048 . - . ID=gene-IY40_RS16555;Name=IY40_RS16555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS16555;old_locus_tag=IY40_16840 NZ_JPQY01000026.1 Protein Homology CDS 151653 152048 . - 0 ID=cds-WP_043141623.1;Parent=gene-IY40_RS16555;Dbxref=GenBank:WP_043141623.1;Name=WP_043141623.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019456416.1;locus_tag=IY40_RS16555;product=RidA family protein;protein_id=WP_043141623.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 152197 153093 . + . ID=gene-IY40_RS16560;Name=IY40_RS16560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS16560;old_locus_tag=IY40_16845 NZ_JPQY01000026.1 Protein Homology CDS 152197 153093 . + 0 ID=cds-WP_043141627.1;Parent=gene-IY40_RS16560;Dbxref=GenBank:WP_043141627.1;Name=WP_043141627.1;Ontology_term=GO:0006355,GO:0001216,GO:0032993;gbkey=CDS;go_component=protein-DNA complex|0032993||IEA;go_function=DNA-binding transcription activator activity|0001216||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004928843.1;locus_tag=IY40_RS16560;product=LysR family transcriptional regulator;protein_id=WP_043141627.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 153098 153523 . - . ID=gene-IY40_RS16565;Name=dksA;gbkey=Gene;gene=dksA;gene_biotype=protein_coding;locus_tag=IY40_RS16565;old_locus_tag=IY40_16850 NZ_JPQY01000026.1 Protein Homology CDS 153098 153523 . - 0 ID=cds-WP_043141630.1;Parent=gene-IY40_RS16565;Dbxref=GenBank:WP_043141630.1;Name=WP_043141630.1;Ontology_term=GO:0006355,GO:0008270,GO:0019899;gbkey=CDS;gene=dksA;go_function=zinc ion binding|0008270||IEA,enzyme binding|0019899||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019456414.1;locus_tag=IY40_RS16565;product=RNA polymerase-binding protein DksA;protein_id=WP_043141630.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 153893 154639 . + . ID=gene-IY40_RS16570;Name=IY40_RS16570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS16570;old_locus_tag=IY40_16860 NZ_JPQY01000026.1 Protein Homology CDS 153893 154639 . + 0 ID=cds-WP_043141633.1;Parent=gene-IY40_RS16570;Dbxref=GenBank:WP_043141633.1;Name=WP_043141633.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006324736.1;locus_tag=IY40_RS16570;product=carbon-nitrogen hydrolase family protein;protein_id=WP_043141633.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 154666 155334 . + . ID=gene-IY40_RS16575;Name=exoX;gbkey=Gene;gene=exoX;gene_biotype=protein_coding;locus_tag=IY40_RS16575;old_locus_tag=IY40_16865 NZ_JPQY01000026.1 Protein Homology CDS 154666 155334 . + 0 ID=cds-WP_004928833.1;Parent=gene-IY40_RS16575;Dbxref=GenBank:WP_004928833.1;Name=WP_004928833.1;gbkey=CDS;gene=exoX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006324735.1;locus_tag=IY40_RS16575;product=exodeoxyribonuclease X;protein_id=WP_004928833.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 155370 157403 . - . ID=gene-IY40_RS16580;Name=IY40_RS16580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS16580;old_locus_tag=IY40_16870 NZ_JPQY01000026.1 Protein Homology CDS 155370 157403 . - 0 ID=cds-WP_043141636.1;Parent=gene-IY40_RS16580;Dbxref=GenBank:WP_043141636.1;Name=WP_043141636.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017892441.1;locus_tag=IY40_RS16580;product=S9 family peptidase;protein_id=WP_043141636.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 157472 158125 . - . ID=gene-IY40_RS16585;Name=IY40_RS16585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS16585;old_locus_tag=IY40_16875 NZ_JPQY01000026.1 Protein Homology CDS 157472 158125 . - 0 ID=cds-WP_033642711.1;Parent=gene-IY40_RS16585;Dbxref=GenBank:WP_033642711.1;Name=WP_033642711.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006324733.1;locus_tag=IY40_RS16585;product=tellurite resistance TerB family protein;protein_id=WP_033642711.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 158284 158862 . - . ID=gene-IY40_RS16590;Name=IY40_RS16590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS16590;old_locus_tag=IY40_16880 NZ_JPQY01000026.1 Protein Homology CDS 158284 158862 . - 0 ID=cds-WP_015377474.1;Parent=gene-IY40_RS16590;Dbxref=GenBank:WP_015377474.1;Name=WP_015377474.1;Ontology_term=GO:0006457;gbkey=CDS;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015377474.1;locus_tag=IY40_RS16590;product=TorD/DmsD family molecular chaperone;protein_id=WP_015377474.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 158905 159642 . - . ID=gene-IY40_RS16595;Name=IY40_RS16595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS16595;old_locus_tag=IY40_16885 NZ_JPQY01000026.1 Protein Homology CDS 158905 159642 . - 0 ID=cds-WP_025302439.1;Parent=gene-IY40_RS16595;Dbxref=GenBank:WP_025302439.1;Name=WP_025302439.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012006358.1;locus_tag=IY40_RS16595;product=phosphatase;protein_id=WP_025302439.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 159733 160674 . - . ID=gene-IY40_RS16600;Name=ghrA;gbkey=Gene;gene=ghrA;gene_biotype=protein_coding;locus_tag=IY40_RS16600;old_locus_tag=IY40_16890 NZ_JPQY01000026.1 Protein Homology CDS 159733 160674 . - 0 ID=cds-WP_043141640.1;Parent=gene-IY40_RS16600;Dbxref=GenBank:WP_043141640.1;Name=WP_043141640.1;Ontology_term=GO:0016618,GO:0030267,GO:0051287;gbkey=CDS;gene=ghrA;go_function=hydroxypyruvate reductase [NAD(P)H] activity|0016618||IEA,glyoxylate reductase (NADPH) activity|0030267||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012006357.1;locus_tag=IY40_RS16600;product=glyoxylate/hydroxypyruvate reductase GhrA;protein_id=WP_043141640.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 160801 162267 . - . ID=gene-IY40_RS16605;Name=IY40_RS16605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS16605;old_locus_tag=IY40_16895 NZ_JPQY01000026.1 Protein Homology CDS 160801 162267 . - 0 ID=cds-WP_049203463.1;Parent=gene-IY40_RS16605;Dbxref=GenBank:WP_049203463.1;Name=WP_049203463.1;Ontology_term=GO:0015833,GO:0055085,GO:0022857,GO:1904680,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA,peptide transmembrane transporter activity|1904680||IEA;go_process=peptide transport|0015833||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006324731.1;locus_tag=IY40_RS16605;product=peptide MFS transporter;protein_id=WP_049203463.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 162715 162804 . + . ID=gene-IY40_RS16610;Name=IY40_RS16610;gbkey=Gene;gene_biotype=tRNA;locus_tag=IY40_RS16610;old_locus_tag=IY40_16900 NZ_JPQY01000026.1 tRNAscan-SE tRNA 162715 162804 . + . ID=rna-IY40_RS16610;Parent=gene-IY40_RS16610;anticodon=(pos:162749..162751);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=IY40_RS16610;product=tRNA-Ser NZ_JPQY01000026.1 tRNAscan-SE exon 162715 162804 . + . ID=exon-IY40_RS16610-1;Parent=rna-IY40_RS16610;anticodon=(pos:162749..162751);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=IY40_RS16610;product=tRNA-Ser NZ_JPQY01000026.1 RefSeq gene 163439 163528 . + . ID=gene-IY40_RS16615;Name=IY40_RS16615;gbkey=Gene;gene_biotype=tRNA;locus_tag=IY40_RS16615;old_locus_tag=IY40_16905 NZ_JPQY01000026.1 tRNAscan-SE tRNA 163439 163528 . + . ID=rna-IY40_RS16615;Parent=gene-IY40_RS16615;anticodon=(pos:163473..163475);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=IY40_RS16615;product=tRNA-Ser NZ_JPQY01000026.1 tRNAscan-SE exon 163439 163528 . + . ID=exon-IY40_RS16615-1;Parent=rna-IY40_RS16615;anticodon=(pos:163473..163475);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=IY40_RS16615;product=tRNA-Ser NZ_JPQY01000026.1 RefSeq gene 163675 164370 . + . ID=gene-IY40_RS16620;Name=IY40_RS16620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS16620;old_locus_tag=IY40_16910 NZ_JPQY01000026.1 GeneMarkS-2+ CDS 163675 164370 . + 0 ID=cds-WP_152561310.1;Parent=gene-IY40_RS16620;Dbxref=GenBank:WP_152561310.1;Name=WP_152561310.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IY40_RS16620;product=hypothetical protein;protein_id=WP_152561310.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 164441 164797 . - . ID=gene-IY40_RS16625;Name=IY40_RS16625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS16625;old_locus_tag=IY40_16915 NZ_JPQY01000026.1 Protein Homology CDS 164441 164797 . - 0 ID=cds-WP_033642706.1;Parent=gene-IY40_RS16625;Dbxref=GenBank:WP_033642706.1;Name=WP_033642706.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004943090.1;locus_tag=IY40_RS16625;product=helix-turn-helix domain-containing protein;protein_id=WP_033642706.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 165097 166284 . + . ID=gene-IY40_RS16630;Name=sdeA;gbkey=Gene;gene=sdeA;gene_biotype=protein_coding;locus_tag=IY40_RS16630;old_locus_tag=IY40_16920 NZ_JPQY01000026.1 Protein Homology CDS 165097 166284 . + 0 ID=cds-WP_043141656.1;Parent=gene-IY40_RS16630;Dbxref=GenBank:WP_043141656.1;Name=WP_043141656.1;gbkey=CDS;gene=sdeA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_048322926.1;locus_tag=IY40_RS16630;product=multidrug efflux RND transporter periplasmic adaptor subunit SdeA;protein_id=WP_043141656.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 166309 169452 . + . ID=gene-IY40_RS16635;Name=sdeB;gbkey=Gene;gene=sdeB;gene_biotype=protein_coding;locus_tag=IY40_RS16635;old_locus_tag=IY40_16925 NZ_JPQY01000026.1 Protein Homology CDS 166309 169452 . + 0 ID=cds-WP_043141659.1;Parent=gene-IY40_RS16635;Dbxref=GenBank:WP_043141659.1;Name=WP_043141659.1;gbkey=CDS;gene=sdeB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_110092881.1;locus_tag=IY40_RS16635;product=multidrug efflux RND transporter permease subunit SdeB;protein_id=WP_043141659.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 169518 169997 . - . ID=gene-IY40_RS16640;Name=IY40_RS16640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS16640;old_locus_tag=IY40_16930 NZ_JPQY01000026.1 Protein Homology CDS 169518 169997 . - 0 ID=cds-WP_043141662.1;Parent=gene-IY40_RS16640;Dbxref=GenBank:WP_043141662.1;Name=WP_043141662.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006322456.1;locus_tag=IY40_RS16640;product=RrF2 family transcriptional regulator;protein_id=WP_043141662.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 170262 170798 . - . ID=gene-IY40_RS16645;Name=IY40_RS16645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS16645;old_locus_tag=IY40_16935 NZ_JPQY01000026.1 Protein Homology CDS 170262 170798 . - 0 ID=cds-WP_167325016.1;Parent=gene-IY40_RS16645;Dbxref=GenBank:WP_167325016.1;Name=WP_167325016.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004928798.1;locus_tag=IY40_RS16645;product=glycine zipper 2TM domain-containing protein;protein_id=WP_167325016.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 171156 172460 . - . ID=gene-IY40_RS16650;Name=IY40_RS16650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS16650;old_locus_tag=IY40_16940 NZ_JPQY01000026.1 Protein Homology CDS 171156 172460 . - 0 ID=cds-WP_004928794.1;Parent=gene-IY40_RS16650;Dbxref=GenBank:WP_004928794.1;Name=WP_004928794.1;Ontology_term=GO:0006116,GO:0003954;gbkey=CDS;go_function=NADH dehydrogenase activity|0003954||IEA;go_process=obsolete NADH oxidation|0006116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015683597.1;locus_tag=IY40_RS16650;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_004928794.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 172793 173335 . - . ID=gene-IY40_RS16655;Name=ycfP;gbkey=Gene;gene=ycfP;gene_biotype=protein_coding;locus_tag=IY40_RS16655;old_locus_tag=IY40_16945 NZ_JPQY01000026.1 Protein Homology CDS 172793 173335 . - 0 ID=cds-WP_015377468.1;Parent=gene-IY40_RS16655;Dbxref=GenBank:WP_015377468.1;Name=WP_015377468.1;gbkey=CDS;gene=ycfP;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226284.1;locus_tag=IY40_RS16655;product=alpha/beta hydrolase YcfP;protein_id=WP_015377468.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 173415 174434 . - . ID=gene-IY40_RS16660;Name=nagZ;gbkey=Gene;gene=nagZ;gene_biotype=protein_coding;locus_tag=IY40_RS16660;old_locus_tag=IY40_16950 NZ_JPQY01000026.1 Protein Homology CDS 173415 174434 . - 0 ID=cds-WP_043141667.1;Parent=gene-IY40_RS16660;Dbxref=GenBank:WP_043141667.1;Name=WP_043141667.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;gene=nagZ;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019455819.1;locus_tag=IY40_RS16660;product=beta-N-acetylhexosaminidase;protein_id=WP_043141667.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 174473 175339 . - . ID=gene-IY40_RS16665;Name=thiK;gbkey=Gene;gene=thiK;gene_biotype=protein_coding;locus_tag=IY40_RS16665;old_locus_tag=IY40_16955 NZ_JPQY01000026.1 Protein Homology CDS 174473 175339 . - 0 ID=cds-WP_043141671.1;Parent=gene-IY40_RS16665;Dbxref=GenBank:WP_043141671.1;Name=WP_043141671.1;Ontology_term=GO:0009228,GO:0016310,GO:0019165;gbkey=CDS;gene=thiK;go_function=thiamine kinase activity|0019165||IEA;go_process=thiamine biosynthetic process|0009228||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004928787.1;locus_tag=IY40_RS16665;product=thiamine kinase;protein_id=WP_043141671.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 175320 175910 . - . ID=gene-IY40_RS16670;Name=lpoB;gbkey=Gene;gene=lpoB;gene_biotype=protein_coding;locus_tag=IY40_RS16670;old_locus_tag=IY40_16960 NZ_JPQY01000026.1 Protein Homology CDS 175320 175910 . - 0 ID=cds-WP_025302429.1;Parent=gene-IY40_RS16670;Dbxref=GenBank:WP_025302429.1;Name=WP_025302429.1;gbkey=CDS;gene=lpoB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004928784.1;locus_tag=IY40_RS16670;product=penicillin-binding protein activator LpoB;protein_id=WP_025302429.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 175937 176326 . - . ID=gene-IY40_RS16675;Name=IY40_RS16675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS16675;old_locus_tag=IY40_16965 NZ_JPQY01000026.1 Protein Homology CDS 175937 176326 . - 0 ID=cds-WP_025302428.1;Parent=gene-IY40_RS16675;Dbxref=GenBank:WP_025302428.1;Name=WP_025302428.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012303975.1;locus_tag=IY40_RS16675;product=YcfL family protein;protein_id=WP_025302428.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 176338 176688 . - . ID=gene-IY40_RS16680;Name=hinT;gbkey=Gene;gene=hinT;gene_biotype=protein_coding;locus_tag=IY40_RS16680;old_locus_tag=IY40_16970 NZ_JPQY01000026.1 Protein Homology CDS 176338 176688 . - 0 ID=cds-WP_004928776.1;Parent=gene-IY40_RS16680;Dbxref=GenBank:WP_004928776.1;Name=WP_004928776.1;gbkey=CDS;gene=hinT;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004928776.1;locus_tag=IY40_RS16680;product=purine nucleoside phosphoramidase;protein_id=WP_004928776.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 176910 177815 . + . ID=gene-IY40_RS16685;Name=IY40_RS16685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS16685;old_locus_tag=IY40_16975 NZ_JPQY01000026.1 Protein Homology CDS 176910 177815 . + 0 ID=cds-WP_043141677.1;Parent=gene-IY40_RS16685;Dbxref=GenBank:WP_043141677.1;Name=WP_043141677.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013812449.1;locus_tag=IY40_RS16685;product=transporter substrate-binding domain-containing protein;protein_id=WP_043141677.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 177812 178189 . - . ID=gene-IY40_RS16690;Name=IY40_RS16690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS16690;old_locus_tag=IY40_16980 NZ_JPQY01000026.1 Protein Homology CDS 177812 178189 . - 0 ID=cds-WP_080287140.1;Parent=gene-IY40_RS16690;Dbxref=GenBank:WP_080287140.1;Name=WP_080287140.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004928768.1;locus_tag=IY40_RS16690;product=winged helix-turn-helix transcriptional regulator;protein_id=WP_080287140.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 178289 179038 . + . ID=gene-IY40_RS16695;Name=IY40_RS16695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS16695;old_locus_tag=IY40_16985 NZ_JPQY01000026.1 Protein Homology CDS 178289 179038 . + 0 ID=cds-WP_043141680.1;Parent=gene-IY40_RS16695;Dbxref=GenBank:WP_043141680.1;Name=WP_043141680.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006322467.1;locus_tag=IY40_RS16695;product=SDR family oxidoreductase;protein_id=WP_043141680.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 179090 179608 . - . ID=gene-IY40_RS16700;Name=IY40_RS16700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS16700;old_locus_tag=IY40_16990 NZ_JPQY01000026.1 Protein Homology CDS 179090 179608 . - 0 ID=cds-WP_043141683.1;Parent=gene-IY40_RS16700;Dbxref=GenBank:WP_043141683.1;Name=WP_043141683.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019455826.1;locus_tag=IY40_RS16700;product=YybH family protein;protein_id=WP_043141683.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 179767 180690 . + . ID=gene-IY40_RS16705;Name=IY40_RS16705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS16705;old_locus_tag=IY40_16995 NZ_JPQY01000026.1 Protein Homology CDS 179767 180690 . + 0 ID=cds-WP_025302423.1;Parent=gene-IY40_RS16705;Dbxref=GenBank:WP_025302423.1;Name=WP_025302423.1;Ontology_term=GO:0006355,GO:0001216,GO:0032993;gbkey=CDS;go_component=protein-DNA complex|0032993||IEA;go_function=DNA-binding transcription activator activity|0001216||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019455827.1;locus_tag=IY40_RS16705;product=LysR family transcriptional regulator;protein_id=WP_025302423.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 180682 181986 . - . ID=gene-IY40_RS16710;Name=IY40_RS16710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS16710;old_locus_tag=IY40_17000 NZ_JPQY01000026.1 Protein Homology CDS 180682 181986 . - 0 ID=cds-WP_043141686.1;Parent=gene-IY40_RS16710;Dbxref=GenBank:WP_043141686.1;Name=WP_043141686.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017892429.1;locus_tag=IY40_RS16710;product=Nramp family divalent metal transporter;protein_id=WP_043141686.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 182217 182687 . + . ID=gene-IY40_RS16715;Name=mntR;gbkey=Gene;gene=mntR;gene_biotype=protein_coding;locus_tag=IY40_RS16715;old_locus_tag=IY40_17005 NZ_JPQY01000026.1 Protein Homology CDS 182217 182687 . + 0 ID=cds-WP_043141688.1;Parent=gene-IY40_RS16715;Dbxref=GenBank:WP_043141688.1;Name=WP_043141688.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700,GO:0046914,GO:0046983;gbkey=CDS;gene=mntR;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,transition metal ion binding|0046914||IEA,protein dimerization activity|0046983||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004928761.1;locus_tag=IY40_RS16715;product=manganese-binding transcriptional regulator MntR;protein_id=WP_043141688.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 182702 183067 . + . ID=gene-IY40_RS16720;Name=IY40_RS16720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS16720;old_locus_tag=IY40_17010 NZ_JPQY01000026.1 Protein Homology CDS 182702 183067 . + 0 ID=cds-WP_043141691.1;Parent=gene-IY40_RS16720;Dbxref=GenBank:WP_043141691.1;Name=WP_043141691.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004928757.1;locus_tag=IY40_RS16720;product=DUF4180 domain-containing protein;protein_id=WP_043141691.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 183124 184557 . - . ID=gene-IY40_RS16725;Name=ptsG;gbkey=Gene;gene=ptsG;gene_biotype=protein_coding;locus_tag=IY40_RS16725;old_locus_tag=IY40_17015 NZ_JPQY01000026.1 Protein Homology CDS 183124 184557 . - 0 ID=cds-WP_016928184.1;Parent=gene-IY40_RS16725;Dbxref=GenBank:WP_016928184.1;Name=WP_016928184.1;Ontology_term=GO:0009401,GO:1904659,GO:0008982,GO:0055056;gbkey=CDS;gene=ptsG;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA,D-glucose transmembrane transporter activity|0055056||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,D-glucose transmembrane transport|1904659||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000475716.1;locus_tag=IY40_RS16725;product=PTS glucose transporter subunit IIBC;protein_id=WP_016928184.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 184901 185677 . - . ID=gene-IY40_RS16730;Name=IY40_RS16730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS16730;old_locus_tag=IY40_17020 NZ_JPQY01000026.1 Protein Homology CDS 184901 185677 . - 0 ID=cds-WP_043141693.1;Parent=gene-IY40_RS16730;Dbxref=GenBank:WP_043141693.1;Name=WP_043141693.1;Ontology_term=GO:0016788;gbkey=CDS;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006322503.1;locus_tag=IY40_RS16730;product=metal-dependent hydrolase;protein_id=WP_043141693.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 185697 186704 . - . ID=gene-IY40_RS16735;Name=holB;gbkey=Gene;gene=holB;gene_biotype=protein_coding;locus_tag=IY40_RS16735;old_locus_tag=IY40_17025 NZ_JPQY01000026.1 Protein Homology CDS 185697 186704 . - 0 ID=cds-WP_025302416.1;Parent=gene-IY40_RS16735;Dbxref=GenBank:WP_025302416.1;Name=WP_025302416.1;Ontology_term=GO:0006260,GO:0003887,GO:0008408;gbkey=CDS;gene=holB;go_function=DNA-directed DNA polymerase activity|0003887||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012104969.1;locus_tag=IY40_RS16735;product=DNA polymerase III subunit delta';protein_id=WP_025302416.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 186704 187342 . - . ID=gene-IY40_RS16740;Name=tmk;gbkey=Gene;gene=tmk;gene_biotype=protein_coding;locus_tag=IY40_RS16740;old_locus_tag=IY40_17030 NZ_JPQY01000026.1 Protein Homology CDS 186704 187342 . - 0 ID=cds-WP_025302415.1;Parent=gene-IY40_RS16740;Dbxref=GenBank:WP_025302415.1;Name=WP_025302415.1;Ontology_term=GO:0006233,GO:0004798,GO:0005524;gbkey=CDS;gene=tmk;go_function=dTMP kinase activity|0004798||IEA,ATP binding|0005524||IEA;go_process=dTDP biosynthetic process|0006233||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015377455.1;locus_tag=IY40_RS16740;product=dTMP kinase;protein_id=WP_025302415.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 187332 188357 . - . ID=gene-IY40_RS16745;Name=mltG;gbkey=Gene;gene=mltG;gene_biotype=protein_coding;locus_tag=IY40_RS16745;old_locus_tag=IY40_17035 NZ_JPQY01000026.1 Protein Homology CDS 187332 188357 . - 0 ID=cds-WP_043141697.1;Parent=gene-IY40_RS16745;Dbxref=GenBank:WP_043141697.1;Name=WP_043141697.1;Ontology_term=GO:0009252,GO:0071555,GO:0008932;gbkey=CDS;gene=mltG;go_function=lytic endotransglycosylase activity|0008932||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012006334.1;locus_tag=IY40_RS16745;product=endolytic transglycosylase MltG;protein_id=WP_043141697.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 188371 189168 . - . ID=gene-IY40_RS16750;Name=pabC;gbkey=Gene;gene=pabC;gene_biotype=protein_coding;locus_tag=IY40_RS16750;old_locus_tag=IY40_17040 NZ_JPQY01000026.1 Protein Homology CDS 188371 189168 . - 0 ID=cds-WP_043141700.1;Parent=gene-IY40_RS16750;Dbxref=GenBank:WP_043141700.1;Name=WP_043141700.1;Ontology_term=GO:0046656,GO:0008696,GO:0030170;gbkey=CDS;gene=pabC;go_function=4-amino-4-deoxychorismate lyase activity|0008696||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=folic acid biosynthetic process|0046656||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006324670.1;locus_tag=IY40_RS16750;product=aminodeoxychorismate lyase;protein_id=WP_043141700.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 189314 190555 . - . ID=gene-IY40_RS16755;Name=fabF;gbkey=Gene;gene=fabF;gene_biotype=protein_coding;locus_tag=IY40_RS16755;old_locus_tag=IY40_17045 NZ_JPQY01000026.1 Protein Homology CDS 189314 190555 . - 0 ID=cds-WP_025302412.1;Parent=gene-IY40_RS16755;Dbxref=GenBank:WP_025302412.1;Name=WP_025302412.1;Ontology_term=GO:0006633,GO:0004315;gbkey=CDS;gene=fabF;go_function=3-oxoacyl-[acyl-carrier-protein] synthase activity|0004315||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309500.1;locus_tag=IY40_RS16755;product=beta-ketoacyl-ACP synthase II;protein_id=WP_025302412.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 190638 190874 . - . ID=gene-IY40_RS16760;Name=acpP;gbkey=Gene;gene=acpP;gene_biotype=protein_coding;locus_tag=IY40_RS16760;old_locus_tag=IY40_17050 NZ_JPQY01000026.1 Protein Homology CDS 190638 190874 . - 0 ID=cds-WP_004719003.1;Parent=gene-IY40_RS16760;Dbxref=GenBank:WP_004719003.1;Name=WP_004719003.1;Ontology_term=GO:0006633;gbkey=CDS;gene=acpP;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016940845.1;locus_tag=IY40_RS16760;product=acyl carrier protein;protein_id=WP_004719003.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 191029 191763 . - . ID=gene-IY40_RS16765;Name=fabG;gbkey=Gene;gene=fabG;gene_biotype=protein_coding;locus_tag=IY40_RS16765;old_locus_tag=IY40_17055 NZ_JPQY01000026.1 Protein Homology CDS 191029 191763 . - 0 ID=cds-WP_016928193.1;Parent=gene-IY40_RS16765;Dbxref=GenBank:WP_016928193.1;Name=WP_016928193.1;Ontology_term=GO:0006633,GO:0004316,GO:0051287;gbkey=CDS;gene=fabG;go_function=3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity|0004316||IEA,NAD binding|0051287||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129017.1;locus_tag=IY40_RS16765;product=3-oxoacyl-ACP reductase FabG;protein_id=WP_016928193.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 191775 192704 . - . ID=gene-IY40_RS16770;Name=fabD;gbkey=Gene;gene=fabD;gene_biotype=protein_coding;locus_tag=IY40_RS16770;old_locus_tag=IY40_17060 NZ_JPQY01000026.1 Protein Homology CDS 191775 192704 . - 0 ID=cds-WP_015377451.1;Parent=gene-IY40_RS16770;Dbxref=GenBank:WP_015377451.1;Name=WP_015377451.1;Ontology_term=GO:0006633,GO:0004314;gbkey=CDS;gene=fabD;go_function=[acyl-carrier-protein] S-malonyltransferase activity|0004314||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013812436.1;locus_tag=IY40_RS16770;product=ACP S-malonyltransferase;protein_id=WP_015377451.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 192723 193676 . - . ID=gene-IY40_RS16775;Name=IY40_RS16775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS16775;old_locus_tag=IY40_17065 NZ_JPQY01000026.1 Protein Homology CDS 192723 193676 . - 0 ID=cds-WP_043141705.1;Parent=gene-IY40_RS16775;Dbxref=GenBank:WP_043141705.1;Name=WP_043141705.1;Ontology_term=GO:0006633,GO:0004315,GO:0016746,GO:0033818;gbkey=CDS;go_function=3-oxoacyl-[acyl-carrier-protein] synthase activity|0004315||IEA,acyltransferase activity|0016746||IEA,beta-ketoacyl-acyl-carrier-protein synthase III activity|0033818||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226268.1;locus_tag=IY40_RS16775;product=beta-ketoacyl-ACP synthase III;protein_id=WP_043141705.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 193683 194717 . - . ID=gene-IY40_RS16780;Name=plsX;gbkey=Gene;gene=plsX;gene_biotype=protein_coding;locus_tag=IY40_RS16780;old_locus_tag=IY40_17070 NZ_JPQY01000026.1 Protein Homology CDS 193683 194717 . - 0 ID=cds-WP_025302410.1;Parent=gene-IY40_RS16780;Dbxref=GenBank:WP_025302410.1;Name=WP_025302410.1;Ontology_term=GO:0008610,GO:0043811;gbkey=CDS;gene=plsX;go_function=phosphate:acyl-[acyl carrier protein] acyltransferase activity|0043811||IEA;go_process=lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210932.1;locus_tag=IY40_RS16780;product=phosphate acyltransferase PlsX;protein_id=WP_025302410.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 194729 194896 . - . ID=gene-IY40_RS25395;Name=rpmF;gbkey=Gene;gene=rpmF;gene_biotype=protein_coding;locus_tag=IY40_RS25395 NZ_JPQY01000026.1 Protein Homology CDS 194729 194896 . - 0 ID=cds-WP_004927778.1;Parent=gene-IY40_RS25395;Dbxref=GenBank:WP_004927778.1;Name=WP_004927778.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rpmF;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013576249.1;locus_tag=IY40_RS25395;product=50S ribosomal protein L32;protein_id=WP_004927778.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 194913 195434 . - . ID=gene-IY40_RS16785;Name=yceD;gbkey=Gene;gene=yceD;gene_biotype=protein_coding;locus_tag=IY40_RS16785;old_locus_tag=IY40_17075 NZ_JPQY01000026.1 Protein Homology CDS 194913 195434 . - 0 ID=cds-WP_004927780.1;Parent=gene-IY40_RS16785;Dbxref=GenBank:WP_004927780.1;Name=WP_004927780.1;gbkey=CDS;gene=yceD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001174481.1;locus_tag=IY40_RS16785;product=23S rRNA accumulation protein YceD;protein_id=WP_004927780.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 195576 196157 . + . ID=gene-IY40_RS16790;Name=IY40_RS16790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS16790;old_locus_tag=IY40_17080 NZ_JPQY01000026.1 Protein Homology CDS 195576 196157 . + 0 ID=cds-WP_050505169.1;Parent=gene-IY40_RS16790;Dbxref=GenBank:WP_050505169.1;Name=WP_050505169.1;Ontology_term=GO:0009117,GO:0009146,GO:0000166,GO:0047429;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,nucleoside triphosphate diphosphatase activity|0047429||IEA;go_process=nucleotide metabolic process|0009117||IEA,purine nucleoside triphosphate catabolic process|0009146||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004927784.1;locus_tag=IY40_RS16790;product=Maf family protein;protein_id=WP_050505169.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 196164 197123 . - . ID=gene-IY40_RS16795;Name=rluC;gbkey=Gene;gene=rluC;gene_biotype=protein_coding;locus_tag=IY40_RS16795;old_locus_tag=IY40_17085 NZ_JPQY01000026.1 Protein Homology CDS 196164 197123 . - 0 ID=cds-WP_043141713.1;Parent=gene-IY40_RS16795;Dbxref=GenBank:WP_043141713.1;Name=WP_043141713.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;gene=rluC;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015377448.1;locus_tag=IY40_RS16795;product=23S rRNA pseudouridine(955/2504/2580) synthase RluC;protein_id=WP_043141713.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 197676 201056 . + . ID=gene-IY40_RS16800;Name=rne;gbkey=Gene;gene=rne;gene_biotype=protein_coding;locus_tag=IY40_RS16800;old_locus_tag=IY40_17090 NZ_JPQY01000026.1 Protein Homology CDS 197676 201056 . + 0 ID=cds-WP_043141716.1;Parent=gene-IY40_RS16800;Dbxref=GenBank:WP_043141716.1;Name=WP_043141716.1;Ontology_term=GO:0006396,GO:0003723,GO:0008995;gbkey=CDS;gene=rne;go_function=RNA binding|0003723||IEA,ribonuclease E activity|0008995||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015377447.1;locus_tag=IY40_RS16800;product=ribonuclease E;protein_id=WP_043141716.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 201117 201404 . - . ID=gene-IY40_RS16805;Name=IY40_RS16805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS16805;old_locus_tag=IY40_17095 NZ_JPQY01000026.1 Protein Homology CDS 201117 201404 . - 0 ID=cds-WP_025302406.1;Parent=gene-IY40_RS16805;Dbxref=GenBank:WP_025302406.1;Name=WP_025302406.1;Ontology_term=GO:0017000,GO:0004497,GO:0016491;gbkey=CDS;go_function=monooxygenase activity|0004497||IEA,oxidoreductase activity|0016491||IEA;go_process=antibiotic biosynthetic process|0017000||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002213107.1;locus_tag=IY40_RS16805;product=putative quinol monooxygenase;protein_id=WP_025302406.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 201618 202664 . + . ID=gene-IY40_RS16810;Name=pyrC;gbkey=Gene;gene=pyrC;gene_biotype=protein_coding;locus_tag=IY40_RS16810;old_locus_tag=IY40_17100 NZ_JPQY01000026.1 Protein Homology CDS 201618 202664 . + 0 ID=cds-WP_043141719.1;Parent=gene-IY40_RS16810;Dbxref=GenBank:WP_043141719.1;Name=WP_043141719.1;Ontology_term=GO:0019856,GO:0004151;gbkey=CDS;gene=pyrC;go_function=dihydroorotase activity|0004151||IEA;go_process=pyrimidine nucleobase biosynthetic process|0019856||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004927803.1;locus_tag=IY40_RS16810;product=dihydroorotase;protein_id=WP_043141719.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 202740 202979 . + . ID=gene-IY40_RS16815;Name=dinI;gbkey=Gene;gene=dinI;gene_biotype=protein_coding;locus_tag=IY40_RS16815;old_locus_tag=IY40_17105 NZ_JPQY01000026.1 Protein Homology CDS 202740 202979 . + 0 ID=cds-WP_043141722.1;Parent=gene-IY40_RS16815;Dbxref=GenBank:WP_043141722.1;Name=WP_043141722.1;gbkey=CDS;gene=dinI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004709658.1;locus_tag=IY40_RS16815;product=DNA damage-inducible protein I;protein_id=WP_043141722.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 203110 203388 . + . ID=gene-IY40_RS16820;Name=IY40_RS16820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS16820;old_locus_tag=IY40_17110 NZ_JPQY01000026.1 Protein Homology CDS 203110 203388 . + 0 ID=cds-WP_004927809.1;Parent=gene-IY40_RS16820;Dbxref=GenBank:WP_004927809.1;Name=WP_004927809.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004927809.1;locus_tag=IY40_RS16820;product=hypothetical protein;protein_id=WP_004927809.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 203590 203844 . + . ID=gene-IY40_RS16825;Name=bssS;gbkey=Gene;gene=bssS;gene_biotype=protein_coding;locus_tag=IY40_RS16825;old_locus_tag=IY40_17115 NZ_JPQY01000026.1 Protein Homology CDS 203590 203844 . + 0 ID=cds-WP_004927812.1;Parent=gene-IY40_RS16825;Dbxref=GenBank:WP_004927812.1;Name=WP_004927812.1;gbkey=CDS;gene=bssS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004927812.1;locus_tag=IY40_RS16825;product=biofilm formation regulator BssS;protein_id=WP_004927812.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 203985 205100 . + . ID=gene-IY40_RS16830;Name=solA;gbkey=Gene;gene=solA;gene_biotype=protein_coding;locus_tag=IY40_RS16830;old_locus_tag=IY40_17120 NZ_JPQY01000026.1 Protein Homology CDS 203985 205100 . + 0 ID=cds-WP_043141725.1;Parent=gene-IY40_RS16830;Dbxref=GenBank:WP_043141725.1;Name=WP_043141725.1;Ontology_term=GO:0050131;gbkey=CDS;gene=solA;go_function=N-methyl-L-amino-acid oxidase activity|0050131||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013812428.1;locus_tag=IY40_RS16830;product=N-methyl-L-tryptophan oxidase;protein_id=WP_043141725.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 205317 205943 . + . ID=gene-IY40_RS16835;Name=IY40_RS16835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS16835;old_locus_tag=IY40_17125 NZ_JPQY01000026.1 Protein Homology CDS 205317 205943 . + 0 ID=cds-WP_025302402.1;Parent=gene-IY40_RS16835;Dbxref=GenBank:WP_025302402.1;Name=WP_025302402.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004943023.1;locus_tag=IY40_RS16835;product=LuxR C-terminal-related transcriptional regulator;protein_id=WP_025302402.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 206066 206182 . + . ID=gene-IY40_RS25400;Name=IY40_RS25400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS25400;old_locus_tag=IY40_17130 NZ_JPQY01000026.1 Protein Homology CDS 206066 206182 . + 0 ID=cds-WP_004927822.1;Parent=gene-IY40_RS25400;Dbxref=GenBank:WP_004927822.1;Name=WP_004927822.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004927822.1;locus_tag=IY40_RS25400;product=DUF2770 family protein;protein_id=WP_004927822.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 206186 207190 . + . ID=gene-IY40_RS16845;Name=IY40_RS16845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS16845;old_locus_tag=IY40_17135 NZ_JPQY01000026.1 Protein Homology CDS 206186 207190 . + 0 ID=cds-WP_043141730.1;Parent=gene-IY40_RS16845;Dbxref=GenBank:WP_043141730.1;Name=WP_043141730.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004927825.1;locus_tag=IY40_RS16845;product=zinc-dependent alcohol dehydrogenase family protein;protein_id=WP_043141730.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 207138 208196 . - . ID=gene-IY40_RS16850;Name=IY40_RS16850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS16850;old_locus_tag=IY40_17140 NZ_JPQY01000026.1 Protein Homology CDS 207138 208196 . - 0 ID=cds-WP_043141734.1;Parent=gene-IY40_RS16850;Dbxref=GenBank:WP_043141734.1;Name=WP_043141734.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017892412.1;locus_tag=IY40_RS16850;product=AI-2E family transporter;protein_id=WP_043141734.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 208639 209193 . + . ID=gene-IY40_RS16855;Name=IY40_RS16855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS16855;old_locus_tag=IY40_17150 NZ_JPQY01000026.1 Protein Homology CDS 208639 209193 . + 0 ID=cds-WP_004927830.1;Parent=gene-IY40_RS16855;Dbxref=GenBank:WP_004927830.1;Name=WP_004927830.1;Ontology_term=GO:0022904,GO:0009055,GO:0020037,GO:0046872,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA;go_process=respiratory electron transport chain|0022904||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012229608.1;locus_tag=IY40_RS16855;product=cytochrome b;protein_id=WP_004927830.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 209217 209795 . + . ID=gene-IY40_RS16860;Name=IY40_RS16860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS16860;old_locus_tag=IY40_17155 NZ_JPQY01000026.1 Protein Homology CDS 209217 209795 . + 0 ID=cds-WP_016928208.1;Parent=gene-IY40_RS16860;Dbxref=GenBank:WP_016928208.1;Name=WP_016928208.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015840724.1;locus_tag=IY40_RS16860;product=YceI family protein;protein_id=WP_016928208.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 209843 210910 . - . ID=gene-IY40_RS16865;Name=trhO;gbkey=Gene;gene=trhO;gene_biotype=protein_coding;gene_synonym=yceA;locus_tag=IY40_RS16865;old_locus_tag=IY40_17160 NZ_JPQY01000026.1 Protein Homology CDS 209843 210910 . - 0 ID=cds-WP_025302399.1;Parent=gene-IY40_RS16865;Dbxref=GenBank:WP_025302399.1;Name=WP_025302399.1;Ontology_term=GO:0006400;gbkey=CDS;gene=trhO;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019455857.1;locus_tag=IY40_RS16865;product=oxygen-dependent tRNA uridine(34) hydroxylase TrhO;protein_id=WP_025302399.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 211030 211185 . - . ID=gene-IY40_RS16870;Name=IY40_RS16870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS16870;old_locus_tag=IY40_17165 NZ_JPQY01000026.1 Protein Homology CDS 211030 211185 . - 0 ID=cds-WP_225735595.1;Parent=gene-IY40_RS16870;Dbxref=GenBank:WP_225735595.1;Name=WP_225735595.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016928210.1;locus_tag=IY40_RS16870;product=histidine kinase;protein_id=WP_225735595.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 211450 212370 . + . ID=gene-IY40_RS16875;Name=IY40_RS16875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS16875;old_locus_tag=IY40_17170 NZ_JPQY01000026.1 Protein Homology CDS 211450 212370 . + 0 ID=cds-WP_025302397.1;Parent=gene-IY40_RS16875;Dbxref=GenBank:WP_025302397.1;Name=WP_025302397.1;Ontology_term=GO:0036104,GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;go_process=Kdo2-lipid A biosynthetic process|0036104||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004927839.1;locus_tag=IY40_RS16875;product=Kdo(2)-lipid IV(A) acyltransferase;protein_id=WP_025302397.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 212472 212756 . + . ID=gene-IY40_RS16880;Name=IY40_RS16880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS16880;old_locus_tag=IY40_17175 NZ_JPQY01000026.1 Protein Homology CDS 212472 212756 . + 0 ID=cds-WP_043141740.1;Parent=gene-IY40_RS16880;Dbxref=GenBank:WP_043141740.1;Name=WP_043141740.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012006308.1;locus_tag=IY40_RS16880;product=YciI family protein;protein_id=WP_043141740.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 212956 214194 . + . ID=gene-IY40_RS16885;Name=mdtG;gbkey=Gene;gene=mdtG;gene_biotype=protein_coding;locus_tag=IY40_RS16885;old_locus_tag=IY40_17180 NZ_JPQY01000026.1 Protein Homology CDS 212956 214194 . + 0 ID=cds-WP_025302395.1;Parent=gene-IY40_RS16885;Dbxref=GenBank:WP_025302395.1;Name=WP_025302395.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=mdtG;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004964318.1;locus_tag=IY40_RS16885;product=multidrug efflux MFS transporter MdtG;protein_id=WP_025302395.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 214670 216223 . + . ID=gene-IY40_RS16890;Name=IY40_RS16890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS16890;old_locus_tag=IY40_17185 NZ_JPQY01000026.1 Protein Homology CDS 214670 216223 . + 0 ID=cds-WP_043141745.1;Parent=gene-IY40_RS16890;Dbxref=GenBank:WP_043141745.1;Name=WP_043141745.1;Ontology_term=GO:0015833,GO:0055085,GO:0022857,GO:1904680,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA,peptide transmembrane transporter activity|1904680||IEA;go_process=peptide transport|0015833||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006322553.1;locus_tag=IY40_RS16890;product=peptide MFS transporter;protein_id=WP_043141745.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 216273 216671 . - . ID=gene-IY40_RS16895;Name=IY40_RS16895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS16895;old_locus_tag=IY40_17190 NZ_JPQY01000026.1 Protein Homology CDS 216273 216671 . - 0 ID=cds-WP_025302393.1;Parent=gene-IY40_RS16895;Dbxref=GenBank:WP_025302393.1;Name=WP_025302393.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004927853.1;locus_tag=IY40_RS16895;product=VOC family protein;protein_id=WP_025302393.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 216662 217090 . - . ID=gene-IY40_RS16900;Name=IY40_RS16900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS16900;old_locus_tag=IY40_17195 NZ_JPQY01000026.1 Protein Homology CDS 216662 217090 . - 0 ID=cds-WP_043141748.1;Parent=gene-IY40_RS16900;Dbxref=GenBank:WP_043141748.1;Name=WP_043141748.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004927856.1;locus_tag=IY40_RS16900;product=YeeE/YedE family protein;protein_id=WP_043141748.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 217093 217527 . - . ID=gene-IY40_RS16905;Name=IY40_RS16905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS16905;old_locus_tag=IY40_17200 NZ_JPQY01000026.1 Protein Homology CDS 217093 217527 . - 0 ID=cds-WP_043141752.1;Parent=gene-IY40_RS16905;Dbxref=GenBank:WP_043141752.1;Name=WP_043141752.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016928217.1;locus_tag=IY40_RS16905;product=YeeE/YedE family protein;protein_id=WP_043141752.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 217517 217834 . - . ID=gene-IY40_RS16910;Name=IY40_RS16910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS16910;old_locus_tag=IY40_17205 NZ_JPQY01000026.1 Protein Homology CDS 217517 217834 . - 0 ID=cds-WP_033638023.1;Parent=gene-IY40_RS16910;Dbxref=GenBank:WP_033638023.1;Name=WP_033638023.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016928218.1;locus_tag=IY40_RS16910;product=ArsR/SmtB family transcription factor;protein_id=WP_033638023.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 217971 218765 . + . ID=gene-IY40_RS16915;Name=IY40_RS16915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS16915;old_locus_tag=IY40_17210 NZ_JPQY01000026.1 Protein Homology CDS 217971 218765 . + 0 ID=cds-WP_043141755.1;Parent=gene-IY40_RS16915;Dbxref=GenBank:WP_043141755.1;Name=WP_043141755.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004927867.1;locus_tag=IY40_RS16915;product=AraC family transcriptional regulator;protein_id=WP_043141755.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 218722 220404 . - . ID=gene-IY40_RS16920;Name=leuA;gbkey=Gene;gene=leuA;gene_biotype=protein_coding;locus_tag=IY40_RS16920;old_locus_tag=IY40_17215 NZ_JPQY01000026.1 Protein Homology CDS 218722 220404 . - 0 ID=cds-WP_043141758.1;Parent=gene-IY40_RS16920;Dbxref=GenBank:WP_043141758.1;Name=WP_043141758.1;Ontology_term=GO:0009098,GO:0003852;gbkey=CDS;gene=leuA;go_function=2-isopropylmalate synthase activity|0003852||IEA;go_process=L-leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015377420.1;locus_tag=IY40_RS16920;product=2-isopropylmalate synthase;protein_id=WP_043141758.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 220615 220992 . + . ID=gene-IY40_RS16925;Name=IY40_RS16925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS16925;old_locus_tag=IY40_17220 NZ_JPQY01000026.1 Protein Homology CDS 220615 220992 . + 0 ID=cds-WP_043141761.1;Parent=gene-IY40_RS16925;Dbxref=GenBank:WP_043141761.1;Name=WP_043141761.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013812412.1;locus_tag=IY40_RS16925;product=MysB family protein;protein_id=WP_043141761.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 221026 221571 . + . ID=gene-IY40_RS16930;Name=IY40_RS16930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS16930;old_locus_tag=IY40_17225 NZ_JPQY01000026.1 Protein Homology CDS 221026 221571 . + 0 ID=cds-WP_025302387.1;Parent=gene-IY40_RS16930;Dbxref=GenBank:WP_025302387.1;Name=WP_025302387.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015377418.1;locus_tag=IY40_RS16930;product=GNAT family N-acetyltransferase;protein_id=WP_025302387.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 221578 221775 . - . ID=gene-IY40_RS16935;Name=IY40_RS16935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS16935;old_locus_tag=IY40_17230 NZ_JPQY01000026.1 Protein Homology CDS 221578 221775 . - 0 ID=cds-WP_049205154.1;Parent=gene-IY40_RS16935;Dbxref=GenBank:WP_049205154.1;Name=WP_049205154.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005170805.1;locus_tag=IY40_RS16935;product=YceK/YidQ family lipoprotein;protein_id=WP_049205154.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 221988 224546 . - . ID=gene-IY40_RS16940;Name=mdoH;gbkey=Gene;gene=mdoH;gene_biotype=protein_coding;locus_tag=IY40_RS16940;old_locus_tag=IY40_17235 NZ_JPQY01000026.1 Protein Homology CDS 221988 224546 . - 0 ID=cds-WP_025302385.1;Parent=gene-IY40_RS16940;Dbxref=GenBank:WP_025302385.1;Name=WP_025302385.1;Ontology_term=GO:0016758;gbkey=CDS;gene=mdoH;go_function=hexosyltransferase activity|0016758||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015377416.1;locus_tag=IY40_RS16940;product=glucans biosynthesis glucosyltransferase MdoH;protein_id=WP_025302385.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 224539 226107 . - . ID=gene-IY40_RS16945;Name=mdoG;gbkey=Gene;gene=mdoG;gene_biotype=protein_coding;locus_tag=IY40_RS16945;old_locus_tag=IY40_17240 NZ_JPQY01000026.1 Protein Homology CDS 224539 226107 . - 0 ID=cds-WP_025302384.1;Parent=gene-IY40_RS16945;Dbxref=GenBank:WP_025302384.1;Name=WP_025302384.1;gbkey=CDS;gene=mdoG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012006295.1;locus_tag=IY40_RS16945;product=glucans biosynthesis protein MdoG;protein_id=WP_025302384.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 226367 227497 . + . ID=gene-IY40_RS16950;Name=mdoC;gbkey=Gene;gene=mdoC;gene_biotype=protein_coding;locus_tag=IY40_RS16950;old_locus_tag=IY40_17245 NZ_JPQY01000026.1 Protein Homology CDS 226367 227497 . + 0 ID=cds-WP_043141764.1;Parent=gene-IY40_RS16950;Dbxref=GenBank:WP_043141764.1;Name=WP_043141764.1;Ontology_term=GO:0016740;gbkey=CDS;gene=mdoC;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006324636.1;locus_tag=IY40_RS16950;product=glucans biosynthesis protein MdoC;protein_id=WP_043141764.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 227801 228025 . + . ID=gene-IY40_RS16955;Name=IY40_RS16955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS16955;old_locus_tag=IY40_17250 NZ_JPQY01000026.1 Protein Homology CDS 227801 228025 . + 0 ID=cds-WP_033633376.1;Parent=gene-IY40_RS16955;Dbxref=GenBank:WP_033633376.1;Name=WP_033633376.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017892394.1;locus_tag=IY40_RS16955;product=hypothetical protein;protein_id=WP_033633376.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 228307 230028 . + . ID=gene-IY40_RS16960;Name=IY40_RS16960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS16960;old_locus_tag=IY40_17255 NZ_JPQY01000026.1 Protein Homology CDS 228307 230028 . + 0 ID=cds-WP_015377414.1;Parent=gene-IY40_RS16960;Dbxref=GenBank:WP_015377414.1;Name=WP_015377414.1;Ontology_term=GO:0006813,GO:0006884,GO:0055085,GO:0051139,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=metal cation:proton antiporter activity|0051139||IEA;go_process=potassium ion transport|0006813||IEA,cell volume homeostasis|0006884||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006322572.1;locus_tag=IY40_RS16960;product=potassium/proton antiporter;protein_id=WP_015377414.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 230277 230405 . + . ID=gene-IY40_RS26635;Name=IY40_RS26635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS26635;old_locus_tag=IY40_17265 NZ_JPQY01000026.1 GeneMarkS-2+ CDS 230277 230405 . + 0 ID=cds-WP_016928228.1;Parent=gene-IY40_RS26635;Dbxref=GenBank:WP_016928228.1;Name=WP_016928228.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IY40_RS26635;product=hypothetical protein;protein_id=WP_016928228.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 230468 230599 . - . ID=gene-IY40_RS26640;Name=IY40_RS26640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS26640 NZ_JPQY01000026.1 Protein Homology CDS 230468 230599 . - 0 ID=cds-WP_256376330.1;Parent=gene-IY40_RS26640;Dbxref=GenBank:WP_256376330.1;Name=WP_256376330.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015377413.1;locus_tag=IY40_RS26640;product=hypothetical protein;protein_id=WP_256376330.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 230669 231172 . - . ID=gene-IY40_RS16970;Name=IY40_RS16970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS16970;old_locus_tag=IY40_17275 NZ_JPQY01000026.1 Protein Homology CDS 230669 231172 . - 0 ID=cds-WP_043141770.1;Parent=gene-IY40_RS16970;Dbxref=GenBank:WP_043141770.1;Name=WP_043141770.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013812405.1;locus_tag=IY40_RS16970;product=YlaC family protein;protein_id=WP_043141770.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 231296 231595 . - . ID=gene-IY40_RS16975;Name=IY40_RS16975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS16975;old_locus_tag=IY40_17280 NZ_JPQY01000026.1 Protein Homology CDS 231296 231595 . - 0 ID=cds-WP_025302380.1;Parent=gene-IY40_RS16975;Dbxref=GenBank:WP_025302380.1;Name=WP_025302380.1;Ontology_term=GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013812404.1;locus_tag=IY40_RS16975;product=sigma-S stabilization anti-adapter protein IraP;protein_id=WP_025302380.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 231780 231876 . - . ID=gene-IY40_RS16980;Name=IY40_RS16980;gbkey=Gene;gene_biotype=tRNA;locus_tag=IY40_RS16980;old_locus_tag=IY40_17285 NZ_JPQY01000026.1 tRNAscan-SE tRNA 231780 231876 . - . ID=rna-IY40_RS16980;Parent=gene-IY40_RS16980;gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=IY40_RS16980;product=tRNA-OTHER NZ_JPQY01000026.1 tRNAscan-SE exon 231780 231876 . - . ID=exon-IY40_RS16980-1;Parent=rna-IY40_RS16980;gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=IY40_RS16980;product=tRNA-OTHER NZ_JPQY01000026.1 RefSeq gene 231989 232837 . - . ID=gene-IY40_RS16985;Name=cho;gbkey=Gene;gene=cho;gene_biotype=protein_coding;locus_tag=IY40_RS16985;old_locus_tag=IY40_17290 NZ_JPQY01000026.1 Protein Homology CDS 231989 232837 . - 0 ID=cds-WP_025302379.1;Parent=gene-IY40_RS16985;Dbxref=GenBank:WP_025302379.1;Name=WP_025302379.1;gbkey=CDS;gene=cho;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004927903.1;locus_tag=IY40_RS16985;product=excinuclease Cho;protein_id=WP_025302379.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 233069 234259 . + . ID=gene-IY40_RS16990;Name=etsA;gbkey=Gene;gene=etsA;gene_biotype=protein_coding;locus_tag=IY40_RS16990;old_locus_tag=IY40_17295 NZ_JPQY01000026.1 Protein Homology CDS 233069 234259 . + 0 ID=cds-WP_455677417.1;Parent=gene-IY40_RS16990;Dbxref=GenBank:WP_455677417.1;Name=WP_455677417.1;gbkey=CDS;gene=etsA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015377409.1;locus_tag=IY40_RS16990;product=macrolide efflux RND transporter periplasmic adaptor subunit EtsA;protein_id=WP_455677417.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 234256 236193 . + . ID=gene-IY40_RS16995;Name=IY40_RS16995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS16995;old_locus_tag=IY40_17300 NZ_JPQY01000026.1 Protein Homology CDS 234256 236193 . + 0 ID=cds-WP_043141772.1;Parent=gene-IY40_RS16995;Dbxref=GenBank:WP_043141772.1;Name=WP_043141772.1;Ontology_term=GO:0005524,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016928233.1;locus_tag=IY40_RS16995;product=MacB family efflux pump subunit;protein_id=WP_043141772.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 236197 237564 . + . ID=gene-IY40_RS17000;Name=etsC;gbkey=Gene;gene=etsC;gene_biotype=protein_coding;locus_tag=IY40_RS17000;old_locus_tag=IY40_17305 NZ_JPQY01000026.1 Protein Homology CDS 236197 237564 . + 0 ID=cds-WP_043141775.1;Parent=gene-IY40_RS17000;Dbxref=GenBank:WP_043141775.1;Name=WP_043141775.1;gbkey=CDS;gene=etsC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015377407.1;locus_tag=IY40_RS17000;product=macrolide efflux RND transporter outer membrane subunit EtsC;protein_id=WP_043141775.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 237979 239481 . + . ID=gene-IY40_RS17005;Name=proP;gbkey=Gene;gene=proP;gene_biotype=protein_coding;locus_tag=IY40_RS17005;old_locus_tag=IY40_17310 NZ_JPQY01000026.1 Protein Homology CDS 237979 239481 . + 0 ID=cds-WP_025302375.1;Parent=gene-IY40_RS17005;Dbxref=GenBank:WP_025302375.1;Name=WP_025302375.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=proP;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004942953.1;locus_tag=IY40_RS17005;product=glycine betaine/L-proline transporter ProP;protein_id=WP_025302375.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 239581 240507 . + . ID=gene-IY40_RS17010;Name=IY40_RS17010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS17010;old_locus_tag=IY40_17315 NZ_JPQY01000026.1 Protein Homology CDS 239581 240507 . + 0 ID=cds-WP_025302374.1;Parent=gene-IY40_RS17010;Dbxref=GenBank:WP_025302374.1;Name=WP_025302374.1;Ontology_term=GO:0006355,GO:0001216,GO:0032993;gbkey=CDS;go_component=protein-DNA complex|0032993||IEA;go_function=DNA-binding transcription activator activity|0001216||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006176475.1;locus_tag=IY40_RS17010;product=LysR family transcriptional regulator;protein_id=WP_025302374.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 240618 242246 . + . ID=gene-IY40_RS17015;Name=IY40_RS17015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS17015;old_locus_tag=IY40_17320 NZ_JPQY01000026.1 Protein Homology CDS 240618 242246 . + 0 ID=cds-WP_025302373.1;Parent=gene-IY40_RS17015;Dbxref=GenBank:WP_025302373.1;Name=WP_025302373.1;Ontology_term=GO:0016491,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: protein motif:HMM:NF012935.6;locus_tag=IY40_RS17015;product=GMC family oxidoreductase;protein_id=WP_025302373.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 242407 242544 . + . ID=gene-IY40_RS26310;Name=IY40_RS26310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS26310;old_locus_tag=IY40_17325 NZ_JPQY01000026.1 Protein Homology CDS 242407 242544 . + 0 ID=cds-WP_162472583.1;Parent=gene-IY40_RS26310;Dbxref=GenBank:WP_162472583.1;Name=WP_162472583.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019455884.1;locus_tag=IY40_RS26310;product=hypothetical protein;protein_id=WP_162472583.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 242647 242916 . + . ID=gene-IY40_RS17025;Name=IY40_RS17025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS17025;old_locus_tag=IY40_17330 NZ_JPQY01000026.1 Protein Homology CDS 242647 242916 . + 0 ID=cds-WP_025302371.1;Parent=gene-IY40_RS17025;Dbxref=GenBank:WP_025302371.1;Name=WP_025302371.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019455885.1;locus_tag=IY40_RS17025;product=hypothetical protein;protein_id=WP_025302371.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 242997 243434 . - . ID=gene-IY40_RS17030;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=IY40_RS17030;old_locus_tag=IY40_17335 NZ_JPQY01000026.1 Protein Homology CDS 242997 243434 . - 0 ID=cds-WP_033633558.1;Parent=gene-IY40_RS17030;Dbxref=GenBank:WP_033633558.1;Name=WP_033633558.1;Ontology_term=GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000503164.1;locus_tag=IY40_RS17030;product=IS200/IS605 family transposase;protein_id=WP_033633558.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 243607 244158 . - . ID=gene-IY40_RS17035;Name=IY40_RS17035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS17035;old_locus_tag=IY40_17340 NZ_JPQY01000026.1 Protein Homology CDS 243607 244158 . - 0 ID=cds-WP_025302370.1;Parent=gene-IY40_RS17035;Dbxref=GenBank:WP_025302370.1;Name=WP_025302370.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004927924.1;locus_tag=IY40_RS17035;product=hypothetical protein;protein_id=WP_025302370.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 244124 244405 . - . ID=gene-IY40_RS17040;Name=IY40_RS17040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS17040;old_locus_tag=IY40_17345 NZ_JPQY01000026.1 Protein Homology CDS 244124 244405 . - 0 ID=cds-WP_025302369.1;Parent=gene-IY40_RS17040;Dbxref=GenBank:WP_025302369.1;Name=WP_025302369.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016928239.1;locus_tag=IY40_RS17040;product=hypothetical protein;protein_id=WP_025302369.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 244546 245115 . - . ID=gene-IY40_RS17045;Name=IY40_RS17045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS17045;old_locus_tag=IY40_17350 NZ_JPQY01000026.1 Protein Homology CDS 244546 245115 . - 0 ID=cds-WP_230203371.1;Parent=gene-IY40_RS17045;Dbxref=GenBank:WP_230203371.1;Name=WP_230203371.1;Ontology_term=GO:0016790,GO:0016836,GO:0047617;gbkey=CDS;go_function=thiolester hydrolase activity|0016790||IEA,hydro-lyase activity|0016836||IEA,fatty acyl-CoA hydrolase activity|0047617||IEA;inference=COORDINATES: protein motif:HMM:TIGR00369.1;locus_tag=IY40_RS17045;product=PaaI family thioesterase;protein_id=WP_230203371.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 245236 246576 . + . ID=gene-IY40_RS17050;Name=IY40_RS17050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS17050;old_locus_tag=IY40_17355 NZ_JPQY01000026.1 Protein Homology CDS 245236 246576 . + 0 ID=cds-WP_025302367.1;Parent=gene-IY40_RS17050;Dbxref=GenBank:WP_025302367.1;Name=WP_025302367.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313132.1;locus_tag=IY40_RS17050;product=anaerobic C4-dicarboxylate transporter;protein_id=WP_025302367.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 246755 246840 . - . ID=gene-IY40_RS17055;Name=IY40_RS17055;gbkey=Gene;gene_biotype=tRNA;locus_tag=IY40_RS17055;old_locus_tag=IY40_17360 NZ_JPQY01000026.1 tRNAscan-SE tRNA 246755 246840 . - . ID=rna-IY40_RS17055;Parent=gene-IY40_RS17055;anticodon=(pos:complement(246804..246806));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=IY40_RS17055;product=tRNA-Leu NZ_JPQY01000026.1 tRNAscan-SE exon 246755 246840 . - . ID=exon-IY40_RS17055-1;Parent=rna-IY40_RS17055;anticodon=(pos:complement(246804..246806));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=IY40_RS17055;product=tRNA-Leu NZ_JPQY01000026.1 RefSeq gene 246851 246924 . - . ID=gene-IY40_RS17060;Name=IY40_RS17060;gbkey=Gene;gene_biotype=tRNA;locus_tag=IY40_RS17060;old_locus_tag=IY40_17365 NZ_JPQY01000026.1 tRNAscan-SE tRNA 246851 246924 . - . ID=rna-IY40_RS17060;Parent=gene-IY40_RS17060;anticodon=(pos:complement(246890..246892));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=IY40_RS17060;product=tRNA-Cys NZ_JPQY01000026.1 tRNAscan-SE exon 246851 246924 . - . ID=exon-IY40_RS17060-1;Parent=rna-IY40_RS17060;anticodon=(pos:complement(246890..246892));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=IY40_RS17060;product=tRNA-Cys NZ_JPQY01000026.1 RefSeq gene 247821 249227 . - . ID=gene-IY40_RS17065;Name=IY40_RS17065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS17065;old_locus_tag=IY40_17370 NZ_JPQY01000026.1 Protein Homology CDS 247821 249227 . - 0 ID=cds-WP_225735594.1;Parent=gene-IY40_RS17065;Dbxref=GenBank:WP_225735594.1;Name=WP_225735594.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006321942.1;locus_tag=IY40_RS17065;product=aminotransferase-like domain-containing protein;protein_id=WP_225735594.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 249647 250672 . + . ID=gene-IY40_RS17070;Name=IY40_RS17070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS17070;old_locus_tag=IY40_17375 NZ_JPQY01000026.1 Protein Homology CDS 249647 250672 . + 0 ID=cds-WP_043141780.1;Parent=gene-IY40_RS17070;Dbxref=GenBank:WP_043141780.1;Name=WP_043141780.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: protein motif:HMM:NF014698.6;locus_tag=IY40_RS17070;product=TauD/TfdA family dioxygenase;protein_id=WP_043141780.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 250697 251482 . + . ID=gene-IY40_RS17075;Name=IY40_RS17075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS17075;old_locus_tag=IY40_17380 NZ_JPQY01000026.1 Protein Homology CDS 250697 251482 . + 0 ID=cds-WP_025302363.1;Parent=gene-IY40_RS17075;Dbxref=GenBank:WP_025302363.1;Name=WP_025302363.1;Ontology_term=GO:0006810,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: protein motif:HMM:NF014035.6;locus_tag=IY40_RS17075;product=sulfite exporter TauE/SafE family protein;protein_id=WP_025302363.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 251519 252271 . + . ID=gene-IY40_RS25405;Name=IY40_RS25405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS25405 NZ_JPQY01000026.1 Protein Homology CDS 251519 252271 . + 0 ID=cds-WP_072008267.1;Parent=gene-IY40_RS25405;Dbxref=GenBank:WP_072008267.1;Name=WP_072008267.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006819980.1;locus_tag=IY40_RS25405;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_072008267.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 252674 252874 . - . ID=gene-IY40_RS26710;Name=IY40_RS26710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS26710 NZ_JPQY01000026.1 Protein Homology CDS 252674 252874 . - 0 ID=cds-WP_380825636.1;Parent=gene-IY40_RS26710;Dbxref=GenBank:WP_380825636.1;Name=WP_380825636.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF047080.2;locus_tag=IY40_RS26710;product=phage integrase central domain-containing protein;protein_id=WP_380825636.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 252890 253249 . - . ID=gene-IY40_RS26715;Name=IY40_RS26715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS26715 NZ_JPQY01000026.1 Protein Homology CDS 252890 253249 . - 0 ID=cds-WP_072008268.1;Parent=gene-IY40_RS26715;Dbxref=GenBank:WP_072008268.1;Name=WP_072008268.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: protein motif:HMM:NF024750.6;locus_tag=IY40_RS26715;product=Arm DNA-binding domain-containing protein;protein_id=WP_072008268.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 253486 253561 . - . ID=gene-IY40_RS17085;Name=IY40_RS17085;gbkey=Gene;gene_biotype=tRNA;locus_tag=IY40_RS17085;old_locus_tag=IY40_17390 NZ_JPQY01000026.1 tRNAscan-SE tRNA 253486 253561 . - . ID=rna-IY40_RS17085;Parent=gene-IY40_RS17085;anticodon=(pos:complement(253526..253528));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=IY40_RS17085;product=tRNA-Gly NZ_JPQY01000026.1 tRNAscan-SE exon 253486 253561 . - . ID=exon-IY40_RS17085-1;Parent=rna-IY40_RS17085;anticodon=(pos:complement(253526..253528));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=IY40_RS17085;product=tRNA-Gly NZ_JPQY01000026.1 RefSeq gene 253706 254254 . - . ID=gene-IY40_RS17090;Name=pgsA;gbkey=Gene;gene=pgsA;gene_biotype=protein_coding;locus_tag=IY40_RS17090;old_locus_tag=IY40_17395 NZ_JPQY01000026.1 Protein Homology CDS 253706 254254 . - 0 ID=cds-WP_004927937.1;Parent=gene-IY40_RS17090;Dbxref=GenBank:WP_004927937.1;Name=WP_004927937.1;gbkey=CDS;gene=pgsA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019080796.1;locus_tag=IY40_RS17090;product=CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase;protein_id=WP_004927937.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 254313 256145 . - . ID=gene-IY40_RS17095;Name=uvrC;gbkey=Gene;gene=uvrC;gene_biotype=protein_coding;locus_tag=IY40_RS17095;old_locus_tag=IY40_17400 NZ_JPQY01000026.1 Protein Homology CDS 254313 256145 . - 0 ID=cds-WP_025302361.1;Parent=gene-IY40_RS17095;Dbxref=GenBank:WP_025302361.1;Name=WP_025302361.1;Ontology_term=GO:0006289,GO:0009381,GO:0009380;gbkey=CDS;gene=uvrC;go_component=excinuclease repair complex|0009380||IEA;go_function=excinuclease ABC activity|0009381||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310678.2;locus_tag=IY40_RS17095;product=excinuclease ABC subunit UvrC;protein_id=WP_025302361.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 256138 256794 . - . ID=gene-IY40_RS17100;Name=uvrY;gbkey=Gene;gene=uvrY;gene_biotype=protein_coding;locus_tag=IY40_RS17100;old_locus_tag=IY40_17405 NZ_JPQY01000026.1 Protein Homology CDS 256138 256794 . - 0 ID=cds-WP_004927947.1;Parent=gene-IY40_RS17100;Dbxref=GenBank:WP_004927947.1;Name=WP_004927947.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=uvrY;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008813142.1;locus_tag=IY40_RS17100;product=UvrY/SirA/GacA family response regulator transcription factor;protein_id=WP_004927947.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 257497 257721 . + . ID=gene-IY40_RS17105;Name=IY40_RS17105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS17105;old_locus_tag=IY40_17410 NZ_JPQY01000026.1 Protein Homology CDS 257497 257721 . + 0 ID=cds-WP_004927950.1;Parent=gene-IY40_RS17105;Dbxref=GenBank:WP_004927950.1;Name=WP_004927950.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004877540.1;locus_tag=IY40_RS17105;product=DUF2594 family protein;protein_id=WP_004927950.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 257843 258184 . + . ID=gene-IY40_RS17110;Name=IY40_RS17110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS17110;old_locus_tag=IY40_17415 NZ_JPQY01000026.1 Protein Homology CDS 257843 258184 . + 0 ID=cds-WP_025302360.1;Parent=gene-IY40_RS17110;Dbxref=GenBank:WP_025302360.1;Name=WP_025302360.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004927953.1;locus_tag=IY40_RS17110;product=GlpM family protein;protein_id=WP_025302360.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 258202 258633 . - . ID=gene-IY40_RS17115;Name=IY40_RS17115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS17115;old_locus_tag=IY40_17420 NZ_JPQY01000026.1 Protein Homology CDS 258202 258633 . - 0 ID=cds-WP_025302359.1;Parent=gene-IY40_RS17115;Dbxref=GenBank:WP_025302359.1;Name=WP_025302359.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006324620.1;locus_tag=IY40_RS17115;product=hypothetical protein;protein_id=WP_025302359.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 258804 259118 . - . ID=gene-IY40_RS26040;Name=IY40_RS26040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS26040 NZ_JPQY01000026.1 Protein Homology CDS 258804 259118 . - 0 ID=cds-WP_033633390.1;Parent=gene-IY40_RS26040;Dbxref=GenBank:WP_033633390.1;Name=WP_033633390.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019456462.1;locus_tag=IY40_RS26040;product=hypothetical protein;protein_id=WP_033633390.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 259661 260020 . + . ID=gene-IY40_RS17125;Name=IY40_RS17125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS17125;old_locus_tag=IY40_17430 NZ_JPQY01000026.1 Protein Homology CDS 259661 260020 . + 0 ID=cds-WP_025302358.1;Parent=gene-IY40_RS17125;Dbxref=GenBank:WP_025302358.1;Name=WP_025302358.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019456461.1;locus_tag=IY40_RS17125;product=hypothetical protein;protein_id=WP_025302358.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 260061 261329 . - . ID=gene-IY40_RS17130;Name=IY40_RS17130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS17130;old_locus_tag=IY40_17435 NZ_JPQY01000026.1 Protein Homology CDS 260061 261329 . - 0 ID=cds-WP_025302357.1;Parent=gene-IY40_RS17130;Dbxref=GenBank:WP_025302357.1;Name=WP_025302357.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004927963.1;locus_tag=IY40_RS17130;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_025302357.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 261322 261582 . - . ID=gene-IY40_RS17135;Name=IY40_RS17135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS17135;old_locus_tag=IY40_17440 NZ_JPQY01000026.1 Protein Homology CDS 261322 261582 . - 0 ID=cds-WP_043141786.1;Parent=gene-IY40_RS17135;Dbxref=GenBank:WP_043141786.1;Name=WP_043141786.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004927966.1;locus_tag=IY40_RS17135;product=(2Fe-2S)-binding protein;protein_id=WP_043141786.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 261579 262703 . - . ID=gene-IY40_RS17140;Name=IY40_RS17140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS17140;old_locus_tag=IY40_17445 NZ_JPQY01000026.1 Protein Homology CDS 261579 262703 . - 0 ID=cds-WP_043141789.1;Parent=gene-IY40_RS17140;Dbxref=GenBank:WP_043141789.1;Name=WP_043141789.1;Ontology_term=GO:0016491,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016928248.1;locus_tag=IY40_RS17140;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_043141789.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 262703 263650 . - . ID=gene-IY40_RS17145;Name=IY40_RS17145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS17145;old_locus_tag=IY40_17450 NZ_JPQY01000026.1 Protein Homology CDS 262703 263650 . - 0 ID=cds-WP_043141792.1;Parent=gene-IY40_RS17145;Dbxref=GenBank:WP_043141792.1;Name=WP_043141792.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013812386.1;locus_tag=IY40_RS17145;product=4-hydroxyproline epimerase;protein_id=WP_043141792.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 264045 264872 . + . ID=gene-IY40_RS17150;Name=IY40_RS17150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS17150 NZ_JPQY01000026.1 Protein Homology CDS 264045 264872 . + 0 ID=cds-WP_050505172.1;Parent=gene-IY40_RS17150;Dbxref=GenBank:WP_050505172.1;Name=WP_050505172.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004927976.1;locus_tag=IY40_RS17150;product=helix-turn-helix domain-containing protein;protein_id=WP_050505172.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 264882 265052 . - . ID=gene-IY40_RS26245;Name=IY40_RS26245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS26245 NZ_JPQY01000026.1 GeneMarkS-2+ CDS 264882 265052 . - 0 ID=cds-WP_153266251.1;Parent=gene-IY40_RS26245;Dbxref=GenBank:WP_153266251.1;Name=WP_153266251.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IY40_RS26245;product=hypothetical protein;protein_id=WP_153266251.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 265082 266002 . + . ID=gene-IY40_RS17155;Name=IY40_RS17155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS17155;old_locus_tag=IY40_17465 NZ_JPQY01000026.1 Protein Homology CDS 265082 266002 . + 0 ID=cds-WP_043141796.1;Parent=gene-IY40_RS17155;Dbxref=GenBank:WP_043141796.1;Name=WP_043141796.1;Ontology_term=GO:0071704,GO:0016829;gbkey=CDS;go_function=lyase activity|0016829||IEA;go_process=obsolete organic substance metabolic process|0071704||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020801844.1;locus_tag=IY40_RS17155;product=dihydrodipicolinate synthase family protein;protein_id=WP_043141796.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 266057 267673 . + . ID=gene-IY40_RS17160;Name=IY40_RS17160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS17160;old_locus_tag=IY40_17470 NZ_JPQY01000026.1 Protein Homology CDS 266057 267673 . + 0 ID=cds-WP_043141800.1;Parent=gene-IY40_RS17160;Dbxref=GenBank:WP_043141800.1;Name=WP_043141800.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016928252.1;locus_tag=IY40_RS17160;product=aldehyde dehydrogenase (NADP(+));protein_id=WP_043141800.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 267718 269283 . + . ID=gene-IY40_RS17165;Name=IY40_RS17165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS17165;old_locus_tag=IY40_17475 NZ_JPQY01000026.1 Protein Homology CDS 267718 269283 . + 0 ID=cds-WP_043141804.1;Parent=gene-IY40_RS17165;Dbxref=GenBank:WP_043141804.1;Name=WP_043141804.1;Ontology_term=GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013812382.1;locus_tag=IY40_RS17165;product=APC family permease;protein_id=WP_043141804.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 269302 270315 . + . ID=gene-IY40_RS17170;Name=IY40_RS17170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS17170;old_locus_tag=IY40_17480 NZ_JPQY01000026.1 Protein Homology CDS 269302 270315 . + 0 ID=cds-WP_025302349.1;Parent=gene-IY40_RS17170;Dbxref=GenBank:WP_025302349.1;Name=WP_025302349.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004927988.1;locus_tag=IY40_RS17170;product=Ldh family oxidoreductase;protein_id=WP_025302349.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 270361 271041 . - . ID=gene-IY40_RS17175;Name=IY40_RS17175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS17175;old_locus_tag=IY40_17485 NZ_JPQY01000026.1 Protein Homology CDS 270361 271041 . - 0 ID=cds-WP_025302348.1;Parent=gene-IY40_RS17175;Dbxref=GenBank:WP_025302348.1;Name=WP_025302348.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004927990.1;locus_tag=IY40_RS17175;product=hypothetical protein;protein_id=WP_025302348.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 271219 271647 . - . ID=gene-IY40_RS17180;Name=IY40_RS17180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS17180;old_locus_tag=IY40_17490 NZ_JPQY01000026.1 Protein Homology CDS 271219 271647 . - 0 ID=cds-WP_025302347.1;Parent=gene-IY40_RS17180;Dbxref=GenBank:WP_025302347.1;Name=WP_025302347.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012006259.1;locus_tag=IY40_RS17180;product=universal stress protein;protein_id=WP_025302347.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 271828 272544 . - . ID=gene-IY40_RS17185;Name=IY40_RS17185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS17185;old_locus_tag=IY40_17495 NZ_JPQY01000026.1 Protein Homology CDS 271828 272544 . - 0 ID=cds-WP_025302346.1;Parent=gene-IY40_RS17185;Dbxref=GenBank:WP_025302346.1;Name=WP_025302346.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006324611.1;locus_tag=IY40_RS17185;product=LuxR family transcriptional regulator;protein_id=WP_025302346.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 272879 274408 . + . ID=gene-IY40_RS17190;Name=IY40_RS17190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS17190;old_locus_tag=IY40_17500 NZ_JPQY01000026.1 Protein Homology CDS 272879 274408 . + 0 ID=cds-WP_043141809.1;Parent=gene-IY40_RS17190;Dbxref=GenBank:WP_043141809.1;Name=WP_043141809.1;Ontology_term=GO:0006631,GO:0070403;gbkey=CDS;go_function=NAD+ binding|0070403||IEA;go_process=fatty acid metabolic process|0006631||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004942899.1;locus_tag=IY40_RS17190;product=3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein;protein_id=WP_043141809.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 274418 275629 . + . ID=gene-IY40_RS17195;Name=IY40_RS17195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS17195;old_locus_tag=IY40_17505 NZ_JPQY01000026.1 Protein Homology CDS 274418 275629 . + 0 ID=cds-WP_043141853.1;Parent=gene-IY40_RS17195;Dbxref=GenBank:WP_043141853.1;Name=WP_043141853.1;Ontology_term=GO:0006631,GO:0003985;gbkey=CDS;go_function=acetyl-CoA C-acetyltransferase activity|0003985||IEA;go_process=fatty acid metabolic process|0006631||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006324609.1;locus_tag=IY40_RS17195;product=acetyl-CoA C-acyltransferase;protein_id=WP_043141853.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 275645 276856 . + . ID=gene-IY40_RS17200;Name=hemA;gbkey=Gene;gene=hemA;gene_biotype=protein_coding;locus_tag=IY40_RS17200;old_locus_tag=IY40_17510 NZ_JPQY01000026.1 Protein Homology CDS 275645 276856 . + 0 ID=cds-WP_025302343.1;Parent=gene-IY40_RS17200;Dbxref=GenBank:WP_025302343.1;Name=WP_025302343.1;Ontology_term=GO:0033014,GO:0003870,GO:0030170;gbkey=CDS;gene=hemA;go_function=5-aminolevulinate synthase activity|0003870||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012006255.1;locus_tag=IY40_RS17200;product=5-aminolevulinate synthase;protein_id=WP_025302343.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 276853 278025 . + . ID=gene-IY40_RS17205;Name=IY40_RS17205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS17205;old_locus_tag=IY40_17515 NZ_JPQY01000026.1 Protein Homology CDS 276853 278025 . + 0 ID=cds-WP_043141814.1;Parent=gene-IY40_RS17205;Dbxref=GenBank:WP_043141814.1;Name=WP_043141814.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013812376.1;locus_tag=IY40_RS17205;product=MFS transporter;protein_id=WP_043141814.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 278018 278737 . + . ID=gene-IY40_RS17210;Name=IY40_RS17210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS17210;old_locus_tag=IY40_17520 NZ_JPQY01000026.1 Protein Homology CDS 278018 278737 . + 0 ID=cds-WP_043141817.1;Parent=gene-IY40_RS17210;Dbxref=GenBank:WP_043141817.1;Name=WP_043141817.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016928259.1;locus_tag=IY40_RS17210;product=enoyl-CoA hydratase-related protein;protein_id=WP_043141817.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 278861 279427 . + . ID=gene-IY40_RS17215;Name=IY40_RS17215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS17215;old_locus_tag=IY40_17525 NZ_JPQY01000026.1 Protein Homology CDS 278861 279427 . + 0 ID=cds-WP_043141821.1;Parent=gene-IY40_RS17215;Dbxref=GenBank:WP_043141821.1;Name=WP_043141821.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016928260.1;locus_tag=IY40_RS17215;product=GNAT family N-acetyltransferase;protein_id=WP_043141821.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 279411 279971 . + . ID=gene-IY40_RS17220;Name=IY40_RS17220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS17220;old_locus_tag=IY40_17530 NZ_JPQY01000026.1 Protein Homology CDS 279411 279971 . + 0 ID=cds-WP_043141824.1;Parent=gene-IY40_RS17220;Dbxref=GenBank:WP_043141824.1;Name=WP_043141824.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015377387.1;locus_tag=IY40_RS17220;product=hypothetical protein;protein_id=WP_043141824.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 280083 280385 . - . ID=gene-IY40_RS17225;Name=IY40_RS17225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS17225;old_locus_tag=IY40_17535 NZ_JPQY01000026.1 Protein Homology CDS 280083 280385 . - 0 ID=cds-WP_025302338.1;Parent=gene-IY40_RS17225;Dbxref=GenBank:WP_025302338.1;Name=WP_025302338.1;Ontology_term=GO:0017000,GO:0004497,GO:0016491;gbkey=CDS;go_function=monooxygenase activity|0004497||IEA,oxidoreductase activity|0016491||IEA;go_process=antibiotic biosynthetic process|0017000||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015377386.1;locus_tag=IY40_RS17225;product=putative quinol monooxygenase;protein_id=WP_025302338.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 280770 282083 . + . ID=gene-IY40_RS17230;Name=IY40_RS17230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS17230;old_locus_tag=IY40_17540 NZ_JPQY01000026.1 Protein Homology CDS 280770 282083 . + 0 ID=cds-WP_025302337.1;Parent=gene-IY40_RS17230;Dbxref=GenBank:WP_025302337.1;Name=WP_025302337.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015377385.1;locus_tag=IY40_RS17230;product=MFS transporter;protein_id=WP_025302337.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 282158 282661 . + . ID=gene-IY40_RS17235;Name=IY40_RS17235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS17235;old_locus_tag=IY40_17545 NZ_JPQY01000026.1 Protein Homology CDS 282158 282661 . + 0 ID=cds-WP_025302336.1;Parent=gene-IY40_RS17235;Dbxref=GenBank:WP_025302336.1;Name=WP_025302336.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004928025.1;locus_tag=IY40_RS17235;product=DedA family protein;protein_id=WP_025302336.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 282882 282957 . - . ID=gene-IY40_RS17240;Name=IY40_RS17240;gbkey=Gene;gene_biotype=tRNA;locus_tag=IY40_RS17240;old_locus_tag=IY40_17550 NZ_JPQY01000026.1 tRNAscan-SE tRNA 282882 282957 . - . ID=rna-IY40_RS17240;Parent=gene-IY40_RS17240;anticodon=(pos:complement(282922..282924));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=IY40_RS17240;product=tRNA-Lys NZ_JPQY01000026.1 tRNAscan-SE exon 282882 282957 . - . ID=exon-IY40_RS17240-1;Parent=rna-IY40_RS17240;anticodon=(pos:complement(282922..282924));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=IY40_RS17240;product=tRNA-Lys NZ_JPQY01000026.1 RefSeq gene 283307 284707 . + . ID=gene-IY40_RS17245;Name=cycA;gbkey=Gene;gene=cycA;gene_biotype=protein_coding;gene_synonym=dagA;locus_tag=IY40_RS17245;old_locus_tag=IY40_17555 NZ_JPQY01000026.1 Protein Homology CDS 283307 284707 . + 0 ID=cds-WP_043141829.1;Parent=gene-IY40_RS17245;Dbxref=GenBank:WP_043141829.1;Name=WP_043141829.1;Ontology_term=GO:0006865,GO:0055085,GO:0016020;gbkey=CDS;gene=cycA;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004928028.1;locus_tag=IY40_RS17245;product=D-serine/D-alanine/glycine transporter;protein_id=WP_043141829.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 284756 285679 . - . ID=gene-IY40_RS17250;Name=IY40_RS17250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS17250;old_locus_tag=IY40_17560 NZ_JPQY01000026.1 Protein Homology CDS 284756 285679 . - 0 ID=cds-WP_025302334.1;Parent=gene-IY40_RS17250;Dbxref=GenBank:WP_025302334.1;Name=WP_025302334.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004928030.1;locus_tag=IY40_RS17250;product=DMT family transporter;protein_id=WP_025302334.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 285747 286322 . + . ID=gene-IY40_RS17255;Name=IY40_RS17255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS17255;old_locus_tag=IY40_17565 NZ_JPQY01000026.1 Protein Homology CDS 285747 286322 . + 0 ID=cds-WP_043141833.1;Parent=gene-IY40_RS17255;Dbxref=GenBank:WP_043141833.1;Name=WP_043141833.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004928032.1;locus_tag=IY40_RS17255;product=helix-turn-helix domain-containing protein;protein_id=WP_043141833.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 286440 286913 . + . ID=gene-IY40_RS17260;Name=IY40_RS17260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS17260;old_locus_tag=IY40_17570 NZ_JPQY01000026.1 Protein Homology CDS 286440 286913 . + 0 ID=cds-WP_025302332.1;Parent=gene-IY40_RS17260;Dbxref=GenBank:WP_025302332.1;Name=WP_025302332.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019456243.1;locus_tag=IY40_RS17260;product=helix-turn-helix domain-containing protein;protein_id=WP_025302332.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 286897 287820 . - . ID=gene-IY40_RS17265;Name=IY40_RS17265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS17265;old_locus_tag=IY40_17575 NZ_JPQY01000026.1 Protein Homology CDS 286897 287820 . - 0 ID=cds-WP_043141837.1;Parent=gene-IY40_RS17265;Dbxref=GenBank:WP_043141837.1;Name=WP_043141837.1;Ontology_term=GO:0001216,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription activator activity|0001216||IEA,DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013812361.1;locus_tag=IY40_RS17265;product=LysR family transcriptional regulator;protein_id=WP_043141837.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 287889 288506 . + . ID=gene-IY40_RS17270;Name=IY40_RS17270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS17270;old_locus_tag=IY40_17580 NZ_JPQY01000026.1 Protein Homology CDS 287889 288506 . + 0 ID=cds-WP_043141841.1;Parent=gene-IY40_RS17270;Dbxref=GenBank:WP_043141841.1;Name=WP_043141841.1;Ontology_term=GO:0006865,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016928269.1;locus_tag=IY40_RS17270;product=LysE family translocator;protein_id=WP_043141841.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 288585 289184 . + . ID=gene-IY40_RS17275;Name=wrbA;gbkey=Gene;gene=wrbA;gene_biotype=protein_coding;locus_tag=IY40_RS17275;old_locus_tag=IY40_17585 NZ_JPQY01000026.1 Protein Homology CDS 288585 289184 . + 0 ID=cds-WP_025302329.1;Parent=gene-IY40_RS17275;Dbxref=GenBank:WP_025302329.1;Name=WP_025302329.1;Ontology_term=GO:0003955,GO:0010181;gbkey=CDS;gene=wrbA;go_function=NAD(P)H dehydrogenase (quinone) activity|0003955||IEA,FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004942840.1;locus_tag=IY40_RS17275;product=NAD(P)H:quinone oxidoreductase;protein_id=WP_025302329.1;transl_table=11 NZ_JPQY01000026.1 RefSeq gene 289421 289735 . + . ID=gene-IY40_RS17280;Name=IY40_RS17280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS17280;old_locus_tag=IY40_17590 NZ_JPQY01000026.1 Protein Homology CDS 289421 289735 . + 0 ID=cds-WP_016928271.1;Parent=gene-IY40_RS17280;Dbxref=GenBank:WP_016928271.1;Name=WP_016928271.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004928047.1;locus_tag=IY40_RS17280;product=hypothetical protein;protein_id=WP_016928271.1;transl_table=11 ##sequence-region NZ_JPQY01000027.1 1 236942 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=615 NZ_JPQY01000027.1 RefSeq region 1 236942 . + . ID=NZ_JPQY01000027.1:1..236942;Dbxref=taxon:615;collected-by=Mahloro H. Serepa%3B Vincent M. Gray;collection-date=2013-04-11;country=South Africa: North West Province;gbkey=Src;genome=genomic;identified-by=Mahloro H. Serepa%3B Vincent M. Gray;isolation-source=entomopathogenic nematode Oscheius sp. MCB living in soil;mol_type=genomic DNA;nat-host=Oscheius sp. MCB;strain=MCB NZ_JPQY01000027.1 RefSeq gene 388 18168 . + . ID=gene-IY40_RS17290;Name=IY40_RS17290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS17290 NZ_JPQY01000027.1 Protein Homology CDS 388 18168 . + 0 ID=cds-WP_080287142.1;Parent=gene-IY40_RS17290;Dbxref=GenBank:WP_080287142.1;Name=WP_080287142.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011147463.1;locus_tag=IY40_RS17290;product=non-ribosomal peptide synthetase;protein_id=WP_080287142.1;transl_table=11 NZ_JPQY01000027.1 RefSeq gene 18211 18909 . - . ID=gene-IY40_RS17295;Name=IY40_RS17295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS17295;old_locus_tag=IY40_17605 NZ_JPQY01000027.1 Protein Homology CDS 18211 18909 . - 0 ID=cds-WP_195904403.1;Parent=gene-IY40_RS17295;Dbxref=GenBank:WP_195904403.1;Name=WP_195904403.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019453184.1;locus_tag=IY40_RS17295;product=CTP synthase C-terminal region-related (seleno)protein;protein_id=WP_195904403.1;transl_table=11 NZ_JPQY01000027.1 RefSeq gene 19023 19943 . - . ID=gene-IY40_RS17300;Name=lpxP;gbkey=Gene;gene=lpxP;gene_biotype=protein_coding;locus_tag=IY40_RS17300;old_locus_tag=IY40_17610 NZ_JPQY01000027.1 Protein Homology CDS 19023 19943 . - 0 ID=cds-WP_016930250.1;Parent=gene-IY40_RS17300;Dbxref=GenBank:WP_016930250.1;Name=WP_016930250.1;Ontology_term=GO:0009409,GO:0036104,GO:0008951,GO:0016020;gbkey=CDS;gene=lpxP;go_component=membrane|0016020||IEA;go_function=palmitoleoyl [acyl-carrier-protein]-dependent acyltransferase activity|0008951||IEA;go_process=response to cold|0009409||IEA,Kdo2-lipid A biosynthetic process|0036104||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004167996.1;locus_tag=IY40_RS17300;product=kdo(2)-lipid IV(A) palmitoleoyltransferase;protein_id=WP_016930250.1;transl_table=11 NZ_JPQY01000027.1 RefSeq gene 20247 21152 . - . ID=gene-IY40_RS17305;Name=lpxO;gbkey=Gene;gene=lpxO;gene_biotype=protein_coding;locus_tag=IY40_RS17305;old_locus_tag=IY40_17615 NZ_JPQY01000027.1 Protein Homology CDS 20247 21152 . - 0 ID=cds-WP_025304427.1;Parent=gene-IY40_RS17305;Dbxref=GenBank:WP_025304427.1;Name=WP_025304427.1;Ontology_term=GO:0018193;gbkey=CDS;gene=lpxO;go_process=peptidyl-amino acid modification|0018193||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004936848.1;locus_tag=IY40_RS17305;product=lipid A hydroxylase LpxO;protein_id=WP_025304427.1;transl_table=11 NZ_JPQY01000027.1 RefSeq gene 21401 21742 . + . ID=gene-IY40_RS17310;Name=IY40_RS17310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS17310;old_locus_tag=IY40_17620 NZ_JPQY01000027.1 Protein Homology CDS 21401 21742 . + 0 ID=cds-WP_016930249.1;Parent=gene-IY40_RS17310;Dbxref=GenBank:WP_016930249.1;Name=WP_016930249.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004936850.1;locus_tag=IY40_RS17310;product=hypothetical protein;protein_id=WP_016930249.1;transl_table=11 NZ_JPQY01000027.1 RefSeq gene 22194 22490 . - . ID=gene-IY40_RS17315;Name=fis;gbkey=Gene;gene=fis;gene_biotype=protein_coding;locus_tag=IY40_RS17315;old_locus_tag=IY40_17630 NZ_JPQY01000027.1 Protein Homology CDS 22194 22490 . - 0 ID=cds-WP_000462905.1;Parent=gene-IY40_RS17315;Dbxref=GenBank:WP_000462905.1;Name=WP_000462905.1;gbkey=CDS;gene=fis;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001465625.1;locus_tag=IY40_RS17315;product=DNA-binding transcriptional regulator Fis;protein_id=WP_000462905.1;transl_table=11 NZ_JPQY01000027.1 RefSeq gene 22472 23476 . - . ID=gene-IY40_RS17320;Name=dusB;gbkey=Gene;gene=dusB;gene_biotype=protein_coding;locus_tag=IY40_RS17320;old_locus_tag=IY40_17635 NZ_JPQY01000027.1 Protein Homology CDS 22472 23476 . - 0 ID=cds-WP_025304426.1;Parent=gene-IY40_RS17320;Dbxref=GenBank:WP_025304426.1;Name=WP_025304426.1;Ontology_term=GO:0008033,GO:0017150,GO:0050660;gbkey=CDS;gene=dusB;go_function=tRNA dihydrouridine synthase activity|0017150||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004936856.1;locus_tag=IY40_RS17320;product=tRNA dihydrouridine synthase DusB;protein_id=WP_025304426.1;transl_table=11 NZ_JPQY01000027.1 RefSeq gene 23870 24751 . - . ID=gene-IY40_RS17325;Name=prmA;gbkey=Gene;gene=prmA;gene_biotype=protein_coding;locus_tag=IY40_RS17325;old_locus_tag=IY40_17640 NZ_JPQY01000027.1 Protein Homology CDS 23870 24751 . - 0 ID=cds-WP_016930246.1;Parent=gene-IY40_RS17325;Dbxref=GenBank:WP_016930246.1;Name=WP_016930246.1;Ontology_term=GO:0036211,GO:0008757;gbkey=CDS;gene=prmA;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005163101.1;locus_tag=IY40_RS17325;product=50S ribosomal protein L11 methyltransferase;protein_id=WP_016930246.1;transl_table=11 NZ_JPQY01000027.1 RefSeq gene 24763 26208 . - . ID=gene-IY40_RS17330;Name=panF;gbkey=Gene;gene=panF;gene_biotype=protein_coding;locus_tag=IY40_RS17330;old_locus_tag=IY40_17645 NZ_JPQY01000027.1 Protein Homology CDS 24763 26208 . - 0 ID=cds-WP_043141886.1;Parent=gene-IY40_RS17330;Dbxref=GenBank:WP_043141886.1;Name=WP_043141886.1;Ontology_term=GO:0015887,GO:0036376,GO:0015081,GO:0015233,GO:0016020;gbkey=CDS;gene=panF;go_component=membrane|0016020||IEA;go_function=sodium ion transmembrane transporter activity|0015081||IEA,pantothenate transmembrane transporter activity|0015233||IEA;go_process=pantothenate transmembrane transport|0015887||IEA,sodium ion export across plasma membrane|0036376||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006708605.1;locus_tag=IY40_RS17330;product=sodium/pantothenate symporter;protein_id=WP_043141886.1;transl_table=11 NZ_JPQY01000027.1 RefSeq gene 26198 26440 . - . ID=gene-IY40_RS17335;Name=IY40_RS17335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS17335;old_locus_tag=IY40_17650 NZ_JPQY01000027.1 Protein Homology CDS 26198 26440 . - 0 ID=cds-WP_043141891.1;Parent=gene-IY40_RS17335;Dbxref=GenBank:WP_043141891.1;Name=WP_043141891.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005975355.1;locus_tag=IY40_RS17335;product=YhdT family protein;protein_id=WP_043141891.1;transl_table=11 NZ_JPQY01000027.1 RefSeq gene 26593 27942 . - . ID=gene-IY40_RS17340;Name=accC;gbkey=Gene;gene=accC;gene_biotype=protein_coding;locus_tag=IY40_RS17340;old_locus_tag=IY40_17655 NZ_JPQY01000027.1 Protein Homology CDS 26593 27942 . - 0 ID=cds-WP_019453177.1;Parent=gene-IY40_RS17340;Dbxref=GenBank:WP_019453177.1;Name=WP_019453177.1;Ontology_term=GO:0004075,GO:0016874,GO:0009317;gbkey=CDS;gene=accC;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=biotin carboxylase activity|0004075||IEA,ligase activity|0016874||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011817284.1;locus_tag=IY40_RS17340;product=acetyl-CoA carboxylase biotin carboxylase subunit;protein_id=WP_019453177.1;transl_table=11 NZ_JPQY01000027.1 RefSeq gene 27955 28422 . - . ID=gene-IY40_RS17345;Name=accB;gbkey=Gene;gene=accB;gene_biotype=protein_coding;locus_tag=IY40_RS17345;old_locus_tag=IY40_17660 NZ_JPQY01000027.1 Protein Homology CDS 27955 28422 . - 0 ID=cds-WP_004936889.1;Parent=gene-IY40_RS17345;Dbxref=GenBank:WP_004936889.1;Name=WP_004936889.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;gene=accB;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008502856.1;locus_tag=IY40_RS17345;product=acetyl-CoA carboxylase biotin carboxyl carrier protein;protein_id=WP_004936889.1;transl_table=11 NZ_JPQY01000027.1 RefSeq gene 28455 28907 . - . ID=gene-IY40_RS17350;Name=aroQ;gbkey=Gene;gene=aroQ;gene_biotype=protein_coding;locus_tag=IY40_RS17350;old_locus_tag=IY40_17665 NZ_JPQY01000027.1 Protein Homology CDS 28455 28907 . - 0 ID=cds-WP_004936891.1;Parent=gene-IY40_RS17350;Dbxref=GenBank:WP_004936891.1;Name=WP_004936891.1;Ontology_term=GO:0009423,GO:0003855;gbkey=CDS;gene=aroQ;go_function=3-dehydroquinate dehydratase activity|0003855||IEA;go_process=chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210071.1;locus_tag=IY40_RS17350;product=type II 3-dehydroquinate dehydratase;protein_id=WP_004936891.1;transl_table=11 NZ_JPQY01000027.1 RefSeq gene 29195 29794 . - . ID=gene-IY40_RS17355;Name=msrQ;gbkey=Gene;gene=msrQ;gene_biotype=protein_coding;locus_tag=IY40_RS17355;old_locus_tag=IY40_17670 NZ_JPQY01000027.1 Protein Homology CDS 29195 29794 . - 0 ID=cds-WP_004936895.1;Parent=gene-IY40_RS17355;Dbxref=GenBank:WP_004936895.1;Name=WP_004936895.1;gbkey=CDS;gene=msrQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001241496.1;locus_tag=IY40_RS17355;product=protein-methionine-sulfoxide reductase heme-binding subunit MsrQ;protein_id=WP_004936895.1;transl_table=11 NZ_JPQY01000027.1 RefSeq gene 29795 30796 . - . ID=gene-IY40_RS17360;Name=msrP;gbkey=Gene;gene=msrP;gene_biotype=protein_coding;locus_tag=IY40_RS17360;old_locus_tag=IY40_17675 NZ_JPQY01000027.1 Protein Homology CDS 29795 30796 . - 0 ID=cds-WP_025304423.1;Parent=gene-IY40_RS17360;Dbxref=GenBank:WP_025304423.1;Name=WP_025304423.1;Ontology_term=GO:0030091,GO:0016667,GO:0043546;gbkey=CDS;gene=msrP;go_function=oxidoreductase activity%2C acting on a sulfur group of donors|0016667||IEA,molybdopterin cofactor binding|0043546||IEA;go_process=protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013814713.1;locus_tag=IY40_RS17360;product=protein-methionine-sulfoxide reductase catalytic subunit MsrP;protein_id=WP_025304423.1;transl_table=11 NZ_JPQY01000027.1 RefSeq gene 30953 31930 . - . ID=gene-IY40_RS17365;Name=acuI;gbkey=Gene;gene=acuI;gene_biotype=protein_coding;locus_tag=IY40_RS17365;old_locus_tag=IY40_17680 NZ_JPQY01000027.1 Protein Homology CDS 30953 31930 . - 0 ID=cds-WP_043141895.1;Parent=gene-IY40_RS17365;Dbxref=GenBank:WP_043141895.1;Name=WP_043141895.1;gbkey=CDS;gene=acuI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019080084.1;locus_tag=IY40_RS17365;product=acrylyl-CoA reductase (NADPH);protein_id=WP_043141895.1;transl_table=11 NZ_JPQY01000027.1 RefSeq gene 32135 34069 . + . ID=gene-IY40_RS17370;Name=csrD;gbkey=Gene;gene=csrD;gene_biotype=protein_coding;locus_tag=IY40_RS17370;old_locus_tag=IY40_17685 NZ_JPQY01000027.1 Protein Homology CDS 32135 34069 . + 0 ID=cds-WP_025304421.1;Parent=gene-IY40_RS17370;Dbxref=GenBank:WP_025304421.1;Name=WP_025304421.1;gbkey=CDS;gene=csrD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004958057.1;locus_tag=IY40_RS17370;product=RNase E specificity factor CsrD;protein_id=WP_025304421.1;transl_table=11 NZ_JPQY01000027.1 RefSeq gene 34483 35526 . + . ID=gene-IY40_RS17375;Name=mreB;gbkey=Gene;gene=mreB;gene_biotype=protein_coding;locus_tag=IY40_RS17375;old_locus_tag=IY40_17690 NZ_JPQY01000027.1 Protein Homology CDS 34483 35526 . + 0 ID=cds-WP_003855260.1;Parent=gene-IY40_RS17375;Dbxref=GenBank:WP_003855260.1;Name=WP_003855260.1;gbkey=CDS;gene=mreB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000913396.1;locus_tag=IY40_RS17375;product=rod shape-determining protein MreB;protein_id=WP_003855260.1;transl_table=11 NZ_JPQY01000027.1 RefSeq gene 35621 36637 . + . ID=gene-IY40_RS17380;Name=mreC;gbkey=Gene;gene=mreC;gene_biotype=protein_coding;locus_tag=IY40_RS17380;old_locus_tag=IY40_17695 NZ_JPQY01000027.1 Protein Homology CDS 35621 36637 . + 0 ID=cds-WP_025304420.1;Parent=gene-IY40_RS17380;Dbxref=GenBank:WP_025304420.1;Name=WP_025304420.1;Ontology_term=GO:0008360;gbkey=CDS;gene=mreC;go_process=regulation of cell shape|0008360||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015379196.1;locus_tag=IY40_RS17380;product=rod shape-determining protein MreC;protein_id=WP_025304420.1;transl_table=11 NZ_JPQY01000027.1 RefSeq gene 36634 37122 . + . ID=gene-IY40_RS17385;Name=mreD;gbkey=Gene;gene=mreD;gene_biotype=protein_coding;locus_tag=IY40_RS17385;old_locus_tag=IY40_17700 NZ_JPQY01000027.1 Protein Homology CDS 36634 37122 . + 0 ID=cds-WP_004936918.1;Parent=gene-IY40_RS17385;Dbxref=GenBank:WP_004936918.1;Name=WP_004936918.1;gbkey=CDS;gene=mreD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210077.1;locus_tag=IY40_RS17385;product=rod shape-determining protein MreD;protein_id=WP_004936918.1;transl_table=11 NZ_JPQY01000027.1 RefSeq gene 37133 37717 . + . ID=gene-IY40_RS17390;Name=IY40_RS17390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS17390;old_locus_tag=IY40_17705 NZ_JPQY01000027.1 Protein Homology CDS 37133 37717 . + 0 ID=cds-WP_004936921.1;Parent=gene-IY40_RS17390;Dbxref=GenBank:WP_004936921.1;Name=WP_004936921.1;Ontology_term=GO:0009117,GO:0009146,GO:0000166,GO:0047429;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,nucleoside triphosphate diphosphatase activity|0047429||IEA;go_process=nucleotide metabolic process|0009117||IEA,purine nucleoside triphosphate catabolic process|0009146||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013814709.1;locus_tag=IY40_RS17390;product=Maf family protein;protein_id=WP_004936921.1;transl_table=11 NZ_JPQY01000027.1 RefSeq gene 37756 39225 . + . ID=gene-IY40_RS17395;Name=rng;gbkey=Gene;gene=rng;gene_biotype=protein_coding;locus_tag=IY40_RS17395;old_locus_tag=IY40_17710 NZ_JPQY01000027.1 Protein Homology CDS 37756 39225 . + 0 ID=cds-WP_025304418.1;Parent=gene-IY40_RS17395;Dbxref=GenBank:WP_025304418.1;Name=WP_025304418.1;Ontology_term=GO:0006396,GO:0003723,GO:0004540;gbkey=CDS;gene=rng;go_function=RNA binding|0003723||IEA,RNA nuclease activity|0004540||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006818051.1;locus_tag=IY40_RS17395;product=ribonuclease G;protein_id=WP_025304418.1;transl_table=11 NZ_JPQY01000027.1 RefSeq gene 39314 43117 . + . ID=gene-IY40_RS17400;Name=yhdP;gbkey=Gene;gene=yhdP;gene_biotype=protein_coding;locus_tag=IY40_RS17400;old_locus_tag=IY40_17715 NZ_JPQY01000027.1 Protein Homology CDS 39314 43117 . + 0 ID=cds-WP_043141903.1;Parent=gene-IY40_RS17400;Dbxref=GenBank:WP_043141903.1;Name=WP_043141903.1;gbkey=CDS;gene=yhdP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013814707.1;locus_tag=IY40_RS17400;product=AsmA2 domain-containing protein YhdP;protein_id=WP_043141903.1;transl_table=11 NZ_JPQY01000027.1 RefSeq gene 43114 43956 . + . ID=gene-IY40_RS17405;Name=nit1;gbkey=Gene;gene=nit1;gene_biotype=protein_coding;locus_tag=IY40_RS17405;old_locus_tag=IY40_17720 NZ_JPQY01000027.1 Protein Homology CDS 43114 43956 . + 0 ID=cds-WP_038629939.1;Parent=gene-IY40_RS17405;Dbxref=GenBank:WP_038629939.1;Name=WP_038629939.1;Ontology_term=GO:0008152,GO:0110050;gbkey=CDS;gene=nit1;go_function=deaminated glutathione amidase activity|0110050||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012303479.1;locus_tag=IY40_RS17405;product=deaminated glutathione amidase;protein_id=WP_038629939.1;transl_table=11 NZ_JPQY01000027.1 RefSeq gene 43982 45427 . + . ID=gene-IY40_RS17410;Name=tldD;gbkey=Gene;gene=tldD;gene_biotype=protein_coding;locus_tag=IY40_RS17410;old_locus_tag=IY40_17725 NZ_JPQY01000027.1 Protein Homology CDS 43982 45427 . + 0 ID=cds-WP_025304416.1;Parent=gene-IY40_RS17410;Dbxref=GenBank:WP_025304416.1;Name=WP_025304416.1;Ontology_term=GO:0006508,GO:0008237;gbkey=CDS;gene=tldD;go_function=metallopeptidase activity|0008237||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009114764.1;locus_tag=IY40_RS17410;product=metalloprotease TldD;protein_id=WP_025304416.1;transl_table=11 NZ_JPQY01000027.1 RefSeq gene 45533 46297 . + . ID=gene-IY40_RS17415;Name=IY40_RS17415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS17415;old_locus_tag=IY40_17730 NZ_JPQY01000027.1 Protein Homology CDS 45533 46297 . + 0 ID=cds-WP_043142154.1;Parent=gene-IY40_RS17415;Dbxref=GenBank:WP_043142154.1;Name=WP_043142154.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019453166.1;locus_tag=IY40_RS17415;product=CDP-diacylglycerol diphosphatase;protein_id=WP_043142154.1;transl_table=11 NZ_JPQY01000027.1 RefSeq gene 46358 48040 . - . ID=gene-IY40_RS17420;Name=IY40_RS17420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS17420;old_locus_tag=IY40_17735 NZ_JPQY01000027.1 Protein Homology CDS 46358 48040 . - 0 ID=cds-WP_043141906.1;Parent=gene-IY40_RS17420;Dbxref=GenBank:WP_043141906.1;Name=WP_043141906.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016930232.1;locus_tag=IY40_RS17420;product=PglL family O-oligosaccharyltransferase;protein_id=WP_043141906.1;transl_table=11 NZ_JPQY01000027.1 RefSeq gene 48735 49676 . - . ID=gene-IY40_RS17425;Name=uriH;gbkey=Gene;gene=uriH;gene_biotype=protein_coding;locus_tag=IY40_RS17425;old_locus_tag=IY40_17740 NZ_JPQY01000027.1 Protein Homology CDS 48735 49676 . - 0 ID=cds-WP_025304397.1;Parent=gene-IY40_RS17425;Dbxref=GenBank:WP_025304397.1;Name=WP_025304397.1;Ontology_term=GO:0016799;gbkey=CDS;gene=uriH;go_function=hydrolase activity%2C hydrolyzing N-glycosyl compounds|0016799||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016930231.1;locus_tag=IY40_RS17425;product=uridine-preferring nucleoside hydrolase UriH;protein_id=WP_025304397.1;transl_table=11 NZ_JPQY01000027.1 RefSeq gene 49884 50159 . + . ID=gene-IY40_RS17430;Name=IY40_RS17430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS17430;old_locus_tag=IY40_17745 NZ_JPQY01000027.1 Protein Homology CDS 49884 50159 . + 0 ID=cds-WP_025304396.1;Parent=gene-IY40_RS17430;Dbxref=GenBank:WP_025304396.1;Name=WP_025304396.1;Ontology_term=GO:0008270;gbkey=CDS;go_function=zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016930230.1;locus_tag=IY40_RS17430;product=zinc ribbon domain-containing protein;protein_id=WP_025304396.1;transl_table=11 NZ_JPQY01000027.1 RefSeq gene 50156 50500 . + . ID=gene-IY40_RS17435;Name=IY40_RS17435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS17435;old_locus_tag=IY40_17750 NZ_JPQY01000027.1 Protein Homology CDS 50156 50500 . + 0 ID=cds-WP_043141909.1;Parent=gene-IY40_RS17435;Dbxref=GenBank:WP_043141909.1;Name=WP_043141909.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015379189.1;locus_tag=IY40_RS17435;product=hypothetical protein;protein_id=WP_043141909.1;transl_table=11 NZ_JPQY01000027.1 RefSeq gene 50491 51402 . - . ID=gene-IY40_RS17440;Name=aaeR;gbkey=Gene;gene=aaeR;gene_biotype=protein_coding;locus_tag=IY40_RS17440;old_locus_tag=IY40_17755 NZ_JPQY01000027.1 Protein Homology CDS 50491 51402 . - 0 ID=cds-WP_025304394.1;Parent=gene-IY40_RS17440;Dbxref=GenBank:WP_025304394.1;Name=WP_025304394.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=aaeR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013814698.1;locus_tag=IY40_RS17440;product=HTH-type transcriptional activator AaeR;protein_id=WP_025304394.1;transl_table=11 NZ_JPQY01000027.1 RefSeq gene 51717 51920 . + . ID=gene-IY40_RS17445;Name=aaeX;gbkey=Gene;gene=aaeX;gene_biotype=protein_coding;locus_tag=IY40_RS17445;old_locus_tag=IY40_17760 NZ_JPQY01000027.1 Protein Homology CDS 51717 51920 . + 0 ID=cds-WP_004936952.1;Parent=gene-IY40_RS17445;Dbxref=GenBank:WP_004936952.1;Name=WP_004936952.1;gbkey=CDS;gene=aaeX;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229082.1;locus_tag=IY40_RS17445;product=p-hydroxybenzoic acid efflux pump operon protein AaeX;protein_id=WP_004936952.1;transl_table=11 NZ_JPQY01000027.1 RefSeq gene 51928 52863 . + . ID=gene-IY40_RS17450;Name=aaeA;gbkey=Gene;gene=aaeA;gene_biotype=protein_coding;locus_tag=IY40_RS17450;old_locus_tag=IY40_17765 NZ_JPQY01000027.1 Protein Homology CDS 51928 52863 . + 0 ID=cds-WP_033644462.1;Parent=gene-IY40_RS17450;Dbxref=GenBank:WP_033644462.1;Name=WP_033644462.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=aaeA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006317504.1;locus_tag=IY40_RS17450;product=p-hydroxybenzoic acid efflux pump subunit AaeA;protein_id=WP_033644462.1;transl_table=11 NZ_JPQY01000027.1 RefSeq gene 52863 54830 . + . ID=gene-IY40_RS17455;Name=aaeB;gbkey=Gene;gene=aaeB;gene_biotype=protein_coding;locus_tag=IY40_RS17455;old_locus_tag=IY40_17770 NZ_JPQY01000027.1 Protein Homology CDS 52863 54830 . + 0 ID=cds-WP_025304392.1;Parent=gene-IY40_RS17455;Dbxref=GenBank:WP_025304392.1;Name=WP_025304392.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=aaeB;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013814697.1;locus_tag=IY40_RS17455;product=p-hydroxybenzoic acid efflux pump subunit AaeB;protein_id=WP_025304392.1;transl_table=11 NZ_JPQY01000027.1 RefSeq gene 55111 55578 . + . ID=gene-IY40_RS17460;Name=IY40_RS17460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS17460;old_locus_tag=IY40_17775 NZ_JPQY01000027.1 Protein Homology CDS 55111 55578 . + 0 ID=cds-WP_043141934.1;Parent=gene-IY40_RS17460;Dbxref=GenBank:WP_043141934.1;Name=WP_043141934.1;Ontology_term=GO:0003723,GO:0004521;gbkey=CDS;go_function=RNA binding|0003723||IEA,RNA endonuclease activity|0004521||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004948611.1;locus_tag=IY40_RS17460;product=ribonuclease;protein_id=WP_043141934.1;transl_table=11 NZ_JPQY01000027.1 RefSeq gene 55584 55883 . + . ID=gene-IY40_RS17465;Name=IY40_RS17465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS17465;old_locus_tag=IY40_17780 NZ_JPQY01000027.1 Protein Homology CDS 55584 55883 . + 0 ID=cds-WP_004936963.1;Parent=gene-IY40_RS17465;Dbxref=GenBank:WP_004936963.1;Name=WP_004936963.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004948609.1;locus_tag=IY40_RS17465;product=barstar family protein;protein_id=WP_004936963.1;transl_table=11 NZ_JPQY01000027.1 RefSeq gene 55914 56462 . - . ID=gene-IY40_RS17470;Name=yjgA;gbkey=Gene;gene=yjgA;gene_biotype=protein_coding;locus_tag=IY40_RS17470;old_locus_tag=IY40_17785 NZ_JPQY01000027.1 Protein Homology CDS 55914 56462 . - 0 ID=cds-WP_004936968.1;Parent=gene-IY40_RS17470;Dbxref=GenBank:WP_004936968.1;Name=WP_004936968.1;Ontology_term=GO:0042254;gbkey=CDS;gene=yjgA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013814696.1;locus_tag=IY40_RS17470;product=ribosome biogenesis factor YjgA;protein_id=WP_004936968.1;transl_table=11 NZ_JPQY01000027.1 RefSeq gene 56642 57982 . + . ID=gene-IY40_RS17475;Name=pmbA;gbkey=Gene;gene=pmbA;gene_biotype=protein_coding;locus_tag=IY40_RS17475;old_locus_tag=IY40_17790 NZ_JPQY01000027.1 Protein Homology CDS 56642 57982 . + 0 ID=cds-WP_025304390.1;Parent=gene-IY40_RS17475;Dbxref=GenBank:WP_025304390.1;Name=WP_025304390.1;Ontology_term=GO:0006508,GO:0008237;gbkey=CDS;gene=pmbA;go_function=metallopeptidase activity|0008237||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011193152.1;locus_tag=IY40_RS17475;product=metalloprotease PmbA;protein_id=WP_025304390.1;transl_table=11 NZ_JPQY01000027.1 RefSeq gene 58121 58507 . + . ID=gene-IY40_RS17480;Name=cybC;gbkey=Gene;gene=cybC;gene_biotype=protein_coding;locus_tag=IY40_RS17480;old_locus_tag=IY40_17795 NZ_JPQY01000027.1 Protein Homology CDS 58121 58507 . + 0 ID=cds-WP_016930224.1;Parent=gene-IY40_RS17480;Dbxref=GenBank:WP_016930224.1;Name=WP_016930224.1;Ontology_term=GO:0022900,GO:0005506,GO:0009055,GO:0042597;gbkey=CDS;gene=cybC;go_component=periplasmic space|0042597||IEA;go_function=iron ion binding|0005506||IEA,electron transfer activity|0009055||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210102.1;locus_tag=IY40_RS17480;product=cytochrome b562;protein_id=WP_016930224.1;transl_table=11 NZ_JPQY01000027.1 RefSeq gene 58512 59294 . - . ID=gene-IY40_RS17485;Name=IY40_RS17485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS17485;old_locus_tag=IY40_17800 NZ_JPQY01000027.1 Protein Homology CDS 58512 59294 . - 0 ID=cds-WP_025304388.1;Parent=gene-IY40_RS17485;Dbxref=GenBank:WP_025304388.1;Name=WP_025304388.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016930223.1;locus_tag=IY40_RS17485;product=AraC family transcriptional regulator;protein_id=WP_025304388.1;transl_table=11 NZ_JPQY01000027.1 RefSeq gene 59578 61032 . + . ID=gene-IY40_RS17490;Name=IY40_RS17490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS17490;old_locus_tag=IY40_17805 NZ_JPQY01000027.1 Protein Homology CDS 59578 61032 . + 0 ID=cds-WP_043141939.1;Parent=gene-IY40_RS17490;Dbxref=GenBank:WP_043141939.1;Name=WP_043141939.1;Ontology_term=GO:0000166;gbkey=CDS;go_function=nucleotide binding|0000166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004936982.1;locus_tag=IY40_RS17490;product=FAD/NAD(P)-binding protein;protein_id=WP_043141939.1;transl_table=11 NZ_JPQY01000027.1 RefSeq gene 61029 61910 . + . ID=gene-IY40_RS17495;Name=IY40_RS17495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS17495;old_locus_tag=IY40_17810 NZ_JPQY01000027.1 Protein Homology CDS 61029 61910 . + 0 ID=cds-WP_043141942.1;Parent=gene-IY40_RS17495;Dbxref=GenBank:WP_043141942.1;Name=WP_043141942.1;Ontology_term=GO:0009058,GO:0016742;gbkey=CDS;go_function=hydroxymethyl-%2C formyl- and related transferase activity|0016742||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015379183.1;locus_tag=IY40_RS17495;product=formyltransferase family protein;protein_id=WP_043141942.1;transl_table=11 NZ_JPQY01000027.1 RefSeq gene 61903 62691 . + . ID=gene-IY40_RS17500;Name=IY40_RS17500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS17500;old_locus_tag=IY40_17815 NZ_JPQY01000027.1 Protein Homology CDS 61903 62691 . + 0 ID=cds-WP_043141945.1;Parent=gene-IY40_RS17500;Dbxref=GenBank:WP_043141945.1;Name=WP_043141945.1;Ontology_term=GO:0006810,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016930220.1;locus_tag=IY40_RS17500;product=sulfite exporter TauE/SafE family protein;protein_id=WP_043141945.1;transl_table=11 NZ_JPQY01000027.1 RefSeq gene 62729 63139 . - . ID=gene-IY40_RS17505;Name=rnk;gbkey=Gene;gene=rnk;gene_biotype=protein_coding;locus_tag=IY40_RS17505;old_locus_tag=IY40_17820 NZ_JPQY01000027.1 Protein Homology CDS 62729 63139 . - 0 ID=cds-WP_004936993.1;Parent=gene-IY40_RS17505;Dbxref=GenBank:WP_004936993.1;Name=WP_004936993.1;Ontology_term=GO:0032784,GO:0003677,GO:0070063;gbkey=CDS;gene=rnk;go_function=DNA binding|0003677||IEA,RNA polymerase binding|0070063||IEA;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210103.1;locus_tag=IY40_RS17505;product=nucleoside diphosphate kinase regulator;protein_id=WP_004936993.1;transl_table=11 NZ_JPQY01000027.1 RefSeq gene 63584 63910 . + . ID=gene-IY40_RS17510;Name=IY40_RS17510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS17510;old_locus_tag=IY40_17825 NZ_JPQY01000027.1 Protein Homology CDS 63584 63910 . + 0 ID=cds-WP_373275471.1;Parent=gene-IY40_RS17510;Dbxref=GenBank:WP_373275471.1;Name=WP_373275471.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016930219.1;locus_tag=IY40_RS17510;product=glycine dehydrogenase;protein_id=WP_373275471.1;transl_table=11 NZ_JPQY01000027.1 RefSeq gene 63947 64312 . + . ID=gene-IY40_RS17515;Name=IY40_RS17515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS17515;old_locus_tag=IY40_17830 NZ_JPQY01000027.1 Protein Homology CDS 63947 64312 . + 0 ID=cds-WP_004937000.1;Parent=gene-IY40_RS17515;Dbxref=GenBank:WP_004937000.1;Name=WP_004937000.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005271418.1;locus_tag=IY40_RS17515;product=glycine-rich SFCGS family protein;protein_id=WP_004937000.1;transl_table=11 NZ_JPQY01000027.1 RefSeq gene 64312 64608 . + . ID=gene-IY40_RS17520;Name=IY40_RS17520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS17520;old_locus_tag=IY40_17835 NZ_JPQY01000027.1 Protein Homology CDS 64312 64608 . + 0 ID=cds-WP_004937003.1;Parent=gene-IY40_RS17520;Dbxref=GenBank:WP_004937003.1;Name=WP_004937003.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019453147.1;locus_tag=IY40_RS17520;product=DUF4312 family protein;protein_id=WP_004937003.1;transl_table=11 NZ_JPQY01000027.1 RefSeq gene 64639 65415 . + . ID=gene-IY40_RS17525;Name=IY40_RS17525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS17525;old_locus_tag=IY40_17840 NZ_JPQY01000027.1 Protein Homology CDS 64639 65415 . + 0 ID=cds-WP_004937006.1;Parent=gene-IY40_RS17525;Dbxref=GenBank:WP_004937006.1;Name=WP_004937006.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224781.1;locus_tag=IY40_RS17525;product=DUF4311 domain-containing protein;protein_id=WP_004937006.1;transl_table=11 NZ_JPQY01000027.1 RefSeq gene 65427 66077 . + . ID=gene-IY40_RS17530;Name=IY40_RS17530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS17530;old_locus_tag=IY40_17845 NZ_JPQY01000027.1 Protein Homology CDS 65427 66077 . + 0 ID=cds-WP_004937013.1;Parent=gene-IY40_RS17530;Dbxref=GenBank:WP_004937013.1;Name=WP_004937013.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013650492.1;locus_tag=IY40_RS17530;product=DUF4310 family protein;protein_id=WP_004937013.1;transl_table=11 NZ_JPQY01000027.1 RefSeq gene 66138 67277 . + . ID=gene-IY40_RS17535;Name=IY40_RS17535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS17535;old_locus_tag=IY40_17850 NZ_JPQY01000027.1 Protein Homology CDS 66138 67277 . + 0 ID=cds-WP_043141948.1;Parent=gene-IY40_RS17535;Dbxref=GenBank:WP_043141948.1;Name=WP_043141948.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011817271.1;locus_tag=IY40_RS17535;product=amidohydrolase/deacetylase family metallohydrolase;protein_id=WP_043141948.1;transl_table=11 NZ_JPQY01000027.1 RefSeq gene 67261 68379 . + . ID=gene-IY40_RS17540;Name=IY40_RS17540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS17540;old_locus_tag=IY40_17855 NZ_JPQY01000027.1 Protein Homology CDS 67261 68379 . + 0 ID=cds-WP_043141950.1;Parent=gene-IY40_RS17540;Dbxref=GenBank:WP_043141950.1;Name=WP_043141950.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013814685.1;locus_tag=IY40_RS17540;product=DgaE family pyridoxal phosphate-dependent ammonia lyase;protein_id=WP_043141950.1;transl_table=11 NZ_JPQY01000027.1 RefSeq gene 68376 69116 . + . ID=gene-IY40_RS17545;Name=dagF;gbkey=Gene;gene=dagF;gene_biotype=protein_coding;locus_tag=IY40_RS17545;old_locus_tag=IY40_17860 NZ_JPQY01000027.1 Protein Homology CDS 68376 69116 . + 0 ID=cds-WP_025304381.1;Parent=gene-IY40_RS17545;Dbxref=GenBank:WP_025304381.1;Name=WP_025304381.1;Ontology_term=GO:0008675;gbkey=CDS;gene=dagF;go_function=2-dehydro-3-deoxy-phosphogluconate aldolase activity|0008675||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017894150.1;locus_tag=IY40_RS17545;product=2-dehydro-3-deoxy-phosphogluconate aldolase;protein_id=WP_025304381.1;transl_table=11 NZ_JPQY01000027.1 RefSeq gene 69328 70542 . + . ID=gene-IY40_RS17550;Name=IY40_RS17550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS17550;old_locus_tag=IY40_17865 NZ_JPQY01000027.1 Protein Homology CDS 69328 70542 . + 0 ID=cds-WP_043141952.1;Parent=gene-IY40_RS17550;Dbxref=GenBank:WP_043141952.1;Name=WP_043141952.1;Ontology_term=GO:0052689;gbkey=CDS;go_function=carboxylic ester hydrolase activity|0052689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012147068.1;locus_tag=IY40_RS17550;product=lactonase family protein;protein_id=WP_043141952.1;transl_table=11 NZ_JPQY01000027.1 RefSeq gene 70594 72510 . + . ID=gene-IY40_RS17555;Name=IY40_RS17555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS17555;old_locus_tag=IY40_17870 NZ_JPQY01000027.1 Protein Homology CDS 70594 72510 . + 0 ID=cds-WP_043141955.1;Parent=gene-IY40_RS17555;Dbxref=GenBank:WP_043141955.1;Name=WP_043141955.1;Ontology_term=GO:0006355,GO:0009401,GO:0008982;gbkey=CDS;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019453142.1;locus_tag=IY40_RS17555;product=BglG family transcription antiterminator;protein_id=WP_043141955.1;transl_table=11 NZ_JPQY01000027.1 RefSeq gene 72551 72823 . - . ID=gene-IY40_RS17560;Name=npr;gbkey=Gene;gene=npr;gene_biotype=protein_coding;locus_tag=IY40_RS17560;old_locus_tag=IY40_17875 NZ_JPQY01000027.1 Protein Homology CDS 72551 72823 . - 0 ID=cds-WP_043141958.1;Parent=gene-IY40_RS17560;Dbxref=GenBank:WP_043141958.1;Name=WP_043141958.1;gbkey=CDS;gene=npr;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000216792.1;locus_tag=IY40_RS17560;product=PTS phosphocarrier protein NPr;protein_id=WP_043141958.1;transl_table=11 NZ_JPQY01000027.1 RefSeq gene 72820 73674 . - . ID=gene-IY40_RS17565;Name=rapZ;gbkey=Gene;gene=rapZ;gene_biotype=protein_coding;locus_tag=IY40_RS17565;old_locus_tag=IY40_17880 NZ_JPQY01000027.1 Protein Homology CDS 72820 73674 . - 0 ID=cds-WP_015379177.1;Parent=gene-IY40_RS17565;Dbxref=GenBank:WP_015379177.1;Name=WP_015379177.1;Ontology_term=GO:0005524;gbkey=CDS;gene=rapZ;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012147065.1;locus_tag=IY40_RS17565;product=RNase adapter RapZ;protein_id=WP_015379177.1;transl_table=11 NZ_JPQY01000027.1 RefSeq gene 73804 74265 . - . ID=gene-IY40_RS17570;Name=ptsN;gbkey=Gene;gene=ptsN;gene_biotype=protein_coding;locus_tag=IY40_RS17570;old_locus_tag=IY40_17885 NZ_JPQY01000027.1 Protein Homology CDS 73804 74265 . - 0 ID=cds-WP_016930212.1;Parent=gene-IY40_RS17570;Dbxref=GenBank:WP_016930212.1;Name=WP_016930212.1;gbkey=CDS;gene=ptsN;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004948550.1;locus_tag=IY40_RS17570;product=PTS IIA-like nitrogen regulatory protein PtsN;protein_id=WP_016930212.1;transl_table=11 NZ_JPQY01000027.1 RefSeq gene 74421 74708 . - . ID=gene-IY40_RS17575;Name=hpf;gbkey=Gene;gene=hpf;gene_biotype=protein_coding;locus_tag=IY40_RS17575;old_locus_tag=IY40_17890 NZ_JPQY01000027.1 Protein Homology CDS 74421 74708 . - 0 ID=cds-WP_004937038.1;Parent=gene-IY40_RS17575;Dbxref=GenBank:WP_004937038.1;Name=WP_004937038.1;Ontology_term=GO:0044238;gbkey=CDS;gene=hpf;go_process=primary metabolic process|0044238||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462231.1;locus_tag=IY40_RS17575;product=ribosome hibernation promoting factor;protein_id=WP_004937038.1;transl_table=11 NZ_JPQY01000027.1 RefSeq gene 74732 76165 . - . ID=gene-IY40_RS17580;Name=rpoN;gbkey=Gene;gene=rpoN;gene_biotype=protein_coding;locus_tag=IY40_RS17580;old_locus_tag=IY40_17895 NZ_JPQY01000027.1 Protein Homology CDS 74732 76165 . - 0 ID=cds-WP_043141961.1;Parent=gene-IY40_RS17580;Dbxref=GenBank:WP_043141961.1;Name=WP_043141961.1;Ontology_term=GO:0006352,GO:0001216,GO:0003677,GO:0016987;gbkey=CDS;gene=rpoN;go_function=DNA-binding transcription activator activity|0001216||IEA,DNA binding|0003677||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229051.1;locus_tag=IY40_RS17580;product=RNA polymerase factor sigma-54;protein_id=WP_043141961.1;transl_table=11 NZ_JPQY01000027.1 RefSeq gene 76218 76943 . - . ID=gene-IY40_RS17585;Name=lptB;gbkey=Gene;gene=lptB;gene_biotype=protein_coding;locus_tag=IY40_RS17585;old_locus_tag=IY40_17900 NZ_JPQY01000027.1 Protein Homology CDS 76218 76943 . - 0 ID=cds-WP_004937040.1;Parent=gene-IY40_RS17585;Dbxref=GenBank:WP_004937040.1;Name=WP_004937040.1;Ontology_term=GO:0055085,GO:0005524,GO:0043190;gbkey=CDS;gene=lptB;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003861862.1;locus_tag=IY40_RS17585;product=LPS export ABC transporter ATP-binding protein;protein_id=WP_004937040.1;transl_table=11 NZ_JPQY01000027.1 RefSeq gene 76950 77489 . - . ID=gene-IY40_RS17590;Name=lptA;gbkey=Gene;gene=lptA;gene_biotype=protein_coding;locus_tag=IY40_RS17590;old_locus_tag=IY40_17905 NZ_JPQY01000027.1 Protein Homology CDS 76950 77489 . - 0 ID=cds-WP_025304377.1;Parent=gene-IY40_RS17590;Dbxref=GenBank:WP_025304377.1;Name=WP_025304377.1;gbkey=CDS;gene=lptA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013814679.1;locus_tag=IY40_RS17590;product=lipopolysaccharide ABC transporter substrate-binding protein LptA;protein_id=WP_025304377.1;transl_table=11 NZ_JPQY01000027.1 RefSeq gene 77458 78036 . - . ID=gene-IY40_RS17595;Name=lptC;gbkey=Gene;gene=lptC;gene_biotype=protein_coding;locus_tag=IY40_RS17595;old_locus_tag=IY40_17910 NZ_JPQY01000027.1 Protein Homology CDS 77458 78036 . - 0 ID=cds-WP_004937047.1;Parent=gene-IY40_RS17595;Dbxref=GenBank:WP_004937047.1;Name=WP_004937047.1;gbkey=CDS;gene=lptC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006708121.1;locus_tag=IY40_RS17595;product=LPS export ABC transporter periplasmic protein LptC;protein_id=WP_004937047.1;transl_table=11 NZ_JPQY01000027.1 RefSeq gene 78033 78587 . - . ID=gene-IY40_RS17600;Name=kdsC;gbkey=Gene;gene=kdsC;gene_biotype=protein_coding;locus_tag=IY40_RS17600;old_locus_tag=IY40_17915 NZ_JPQY01000027.1 Protein Homology CDS 78033 78587 . - 0 ID=cds-WP_021505108.1;Parent=gene-IY40_RS17600;Dbxref=GenBank:WP_021505108.1;Name=WP_021505108.1;Ontology_term=GO:0016788;gbkey=CDS;gene=kdsC;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004948532.1;locus_tag=IY40_RS17600;product=3-deoxy-manno-octulosonate-8-phosphatase KdsC;protein_id=WP_021505108.1;transl_table=11 NZ_JPQY01000027.1 RefSeq gene 78605 79591 . - . ID=gene-IY40_RS17605;Name=kdsD;gbkey=Gene;gene=kdsD;gene_biotype=protein_coding;locus_tag=IY40_RS17605;old_locus_tag=IY40_17920 NZ_JPQY01000027.1 Protein Homology CDS 78605 79591 . - 0 ID=cds-WP_025304376.1;Parent=gene-IY40_RS17605;Dbxref=GenBank:WP_025304376.1;Name=WP_025304376.1;Ontology_term=GO:1901135,GO:0016853,GO:0097367;gbkey=CDS;gene=kdsD;go_function=isomerase activity|0016853||IEA,carbohydrate derivative binding|0097367||IEA;go_process=carbohydrate derivative metabolic process|1901135||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210119.1;locus_tag=IY40_RS17605;product=arabinose-5-phosphate isomerase KdsD;protein_id=WP_025304376.1;transl_table=11 NZ_JPQY01000027.1 RefSeq gene 79608 80585 . - . ID=gene-IY40_RS17610;Name=IY40_RS17610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS17610;old_locus_tag=IY40_17925 NZ_JPQY01000027.1 Protein Homology CDS 79608 80585 . - 0 ID=cds-WP_033644493.1;Parent=gene-IY40_RS17610;Dbxref=GenBank:WP_033644493.1;Name=WP_033644493.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017894142.1;locus_tag=IY40_RS17610;product=calcium/sodium antiporter;protein_id=WP_033644493.1;transl_table=11 NZ_JPQY01000027.1 RefSeq gene 80889 81704 . + . ID=gene-IY40_RS17615;Name=mlaF;gbkey=Gene;gene=mlaF;gene_biotype=protein_coding;locus_tag=IY40_RS17615;old_locus_tag=IY40_17930 NZ_JPQY01000027.1 Protein Homology CDS 80889 81704 . + 0 ID=cds-WP_043141965.1;Parent=gene-IY40_RS17615;Dbxref=GenBank:WP_043141965.1;Name=WP_043141965.1;Ontology_term=GO:0005524;gbkey=CDS;gene=mlaF;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012147056.1;locus_tag=IY40_RS17615;product=phospholipid ABC transporter ATP-binding protein MlaF;protein_id=WP_043141965.1;transl_table=11 NZ_JPQY01000027.1 RefSeq gene 81709 82491 . + . ID=gene-IY40_RS17620;Name=mlaE;gbkey=Gene;gene=mlaE;gene_biotype=protein_coding;locus_tag=IY40_RS17620;old_locus_tag=IY40_17935 NZ_JPQY01000027.1 Protein Homology CDS 81709 82491 . + 0 ID=cds-WP_004937059.1;Parent=gene-IY40_RS17620;Dbxref=GenBank:WP_004937059.1;Name=WP_004937059.1;Ontology_term=GO:0043190;gbkey=CDS;gene=mlaE;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013650484.1;locus_tag=IY40_RS17620;product=lipid asymmetry maintenance ABC transporter permease subunit MlaE;protein_id=WP_004937059.1;transl_table=11 NZ_JPQY01000027.1 RefSeq gene 82496 83044 . + . ID=gene-IY40_RS17625;Name=mlaD;gbkey=Gene;gene=mlaD;gene_biotype=protein_coding;locus_tag=IY40_RS17625;old_locus_tag=IY40_17940 NZ_JPQY01000027.1 Protein Homology CDS 82496 83044 . + 0 ID=cds-WP_025304373.1;Parent=gene-IY40_RS17625;Dbxref=GenBank:WP_025304373.1;Name=WP_025304373.1;Ontology_term=GO:0015914;gbkey=CDS;gene=mlaD;go_process=phospholipid transport|0015914||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013814677.1;locus_tag=IY40_RS17625;product=outer membrane lipid asymmetry maintenance protein MlaD;protein_id=WP_025304373.1;transl_table=11 NZ_JPQY01000027.1 RefSeq gene 83059 83688 . + . ID=gene-IY40_RS17630;Name=mlaC;gbkey=Gene;gene=mlaC;gene_biotype=protein_coding;locus_tag=IY40_RS17630;old_locus_tag=IY40_17945 NZ_JPQY01000027.1 Protein Homology CDS 83059 83688 . + 0 ID=cds-WP_025304372.1;Parent=gene-IY40_RS17630;Dbxref=GenBank:WP_025304372.1;Name=WP_025304372.1;gbkey=CDS;gene=mlaC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004948518.1;locus_tag=IY40_RS17630;product=phospholipid-binding protein MlaC;protein_id=WP_025304372.1;transl_table=11 NZ_JPQY01000027.1 RefSeq gene 83688 83990 . + . ID=gene-IY40_RS17635;Name=mlaB;gbkey=Gene;gene=mlaB;gene_biotype=protein_coding;locus_tag=IY40_RS17635;old_locus_tag=IY40_17950 NZ_JPQY01000027.1 Protein Homology CDS 83688 83990 . + 0 ID=cds-WP_025304371.1;Parent=gene-IY40_RS17635;Dbxref=GenBank:WP_025304371.1;Name=WP_025304371.1;gbkey=CDS;gene=mlaB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019453132.1;locus_tag=IY40_RS17635;product=lipid asymmetry maintenance protein MlaB;protein_id=WP_025304371.1;transl_table=11 NZ_JPQY01000027.1 RefSeq gene 84131 84385 . + . ID=gene-IY40_RS17640;Name=ibaG;gbkey=Gene;gene=ibaG;gene_biotype=protein_coding;locus_tag=IY40_RS17640;old_locus_tag=IY40_17955 NZ_JPQY01000027.1 Protein Homology CDS 84131 84385 . + 0 ID=cds-WP_025304370.1;Parent=gene-IY40_RS17640;Dbxref=GenBank:WP_025304370.1;Name=WP_025304370.1;gbkey=CDS;gene=ibaG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417657.2;locus_tag=IY40_RS17640;product=BolA family iron metabolism protein IbaG;protein_id=WP_025304370.1;transl_table=11 NZ_JPQY01000027.1 RefSeq gene 84441 85700 . + . ID=gene-IY40_RS17645;Name=murA;gbkey=Gene;gene=murA;gene_biotype=protein_coding;locus_tag=IY40_RS17645;old_locus_tag=IY40_17960 NZ_JPQY01000027.1 Protein Homology CDS 84441 85700 . + 0 ID=cds-WP_004937068.1;Parent=gene-IY40_RS17645;Dbxref=GenBank:WP_004937068.1;Name=WP_004937068.1;Ontology_term=GO:0019277,GO:0008760;gbkey=CDS;gene=murA;go_function=UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity|0008760||IEA;go_process=UDP-N-acetylgalactosamine biosynthetic process|0019277||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210127.1;locus_tag=IY40_RS17645;product=UDP-N-acetylglucosamine 1-carboxyvinyltransferase;protein_id=WP_004937068.1;transl_table=11 NZ_JPQY01000027.1 RefSeq gene 85772 86830 . - . ID=gene-IY40_RS17650;Name=degS;gbkey=Gene;gene=degS;gene_biotype=protein_coding;locus_tag=IY40_RS17650;old_locus_tag=IY40_17965 NZ_JPQY01000027.1 Protein Homology CDS 85772 86830 . - 0 ID=cds-WP_025304369.1;Parent=gene-IY40_RS17650;Dbxref=GenBank:WP_025304369.1;Name=WP_025304369.1;Ontology_term=GO:0006508,GO:0004252;gbkey=CDS;gene=degS;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013814675.1;locus_tag=IY40_RS17650;product=outer membrane-stress sensor serine endopeptidase DegS;protein_id=WP_025304369.1;transl_table=11 NZ_JPQY01000027.1 RefSeq gene 86919 88289 . - . ID=gene-IY40_RS17655;Name=degQ;gbkey=Gene;gene=degQ;gene_biotype=protein_coding;locus_tag=IY40_RS17655;old_locus_tag=IY40_17970 NZ_JPQY01000027.1 Protein Homology CDS 86919 88289 . - 0 ID=cds-WP_025304368.1;Parent=gene-IY40_RS17655;Dbxref=GenBank:WP_025304368.1;Name=WP_025304368.1;Ontology_term=GO:0006508,GO:0004252,GO:0005515;gbkey=CDS;gene=degQ;go_function=serine-type endopeptidase activity|0004252||IEA,protein binding|0005515||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002218066.1;locus_tag=IY40_RS17655;product=serine endoprotease DegQ;protein_id=WP_025304368.1;transl_table=11 NZ_JPQY01000027.1 RefSeq gene 88464 88865 . - . ID=gene-IY40_RS17660;Name=zapG;gbkey=Gene;gene=zapG;gene_biotype=protein_coding;locus_tag=IY40_RS17660;old_locus_tag=IY40_17975 NZ_JPQY01000027.1 Protein Homology CDS 88464 88865 . - 0 ID=cds-WP_004937074.1;Parent=gene-IY40_RS17660;Dbxref=GenBank:WP_004937074.1;Name=WP_004937074.1;gbkey=CDS;gene=zapG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004722362.1;locus_tag=IY40_RS17660;product=Z-ring associated protein ZapG;protein_id=WP_004937074.1;transl_table=11 NZ_JPQY01000027.1 RefSeq gene 89097 90224 . + . ID=gene-IY40_RS17665;Name=zapE;gbkey=Gene;gene=zapE;gene_biotype=protein_coding;locus_tag=IY40_RS17665;old_locus_tag=IY40_17980 NZ_JPQY01000027.1 Protein Homology CDS 89097 90224 . + 0 ID=cds-WP_025304367.1;Parent=gene-IY40_RS17665;Dbxref=GenBank:WP_025304367.1;Name=WP_025304367.1;Ontology_term=GO:0051301,GO:0005524,GO:0016887;gbkey=CDS;gene=zapE;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002220218.1;locus_tag=IY40_RS17665;product=cell division protein ZapE;protein_id=WP_025304367.1;transl_table=11 NZ_JPQY01000027.1 RefSeq gene 90499 90927 . + . ID=gene-IY40_RS17670;Name=rplM;gbkey=Gene;gene=rplM;gene_biotype=protein_coding;locus_tag=IY40_RS17670;old_locus_tag=IY40_17985 NZ_JPQY01000027.1 Protein Homology CDS 90499 90927 . + 0 ID=cds-WP_004937079.1;Parent=gene-IY40_RS17670;Dbxref=GenBank:WP_004937079.1;Name=WP_004937079.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplM;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010847760.1;locus_tag=IY40_RS17670;product=50S ribosomal protein L13;protein_id=WP_004937079.1;transl_table=11 NZ_JPQY01000027.1 RefSeq gene 90943 91335 . + . ID=gene-IY40_RS17675;Name=rpsI;gbkey=Gene;gene=rpsI;gene_biotype=protein_coding;locus_tag=IY40_RS17675;old_locus_tag=IY40_17990 NZ_JPQY01000027.1 Protein Homology CDS 90943 91335 . + 0 ID=cds-WP_004937080.1;Parent=gene-IY40_RS17675;Dbxref=GenBank:WP_004937080.1;Name=WP_004937080.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsI;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000829824.1;locus_tag=IY40_RS17675;product=30S ribosomal protein S9;protein_id=WP_004937080.1;transl_table=11 NZ_JPQY01000027.1 RefSeq gene 91661 92302 . + . ID=gene-IY40_RS17680;Name=sspA;gbkey=Gene;gene=sspA;gene_biotype=protein_coding;locus_tag=IY40_RS17680;old_locus_tag=IY40_17995 NZ_JPQY01000027.1 Protein Homology CDS 91661 92302 . + 0 ID=cds-WP_025304366.1;Parent=gene-IY40_RS17680;Dbxref=GenBank:WP_025304366.1;Name=WP_025304366.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;gene=sspA;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005162411.1;locus_tag=IY40_RS17680;product=stringent starvation protein SspA;protein_id=WP_025304366.1;transl_table=11 NZ_JPQY01000027.1 RefSeq gene 92308 92808 . + . ID=gene-IY40_RS17685;Name=sspB;gbkey=Gene;gene=sspB;gene_biotype=protein_coding;locus_tag=IY40_RS17685;old_locus_tag=IY40_18000 NZ_JPQY01000027.1 Protein Homology CDS 92308 92808 . + 0 ID=cds-WP_025304365.1;Parent=gene-IY40_RS17685;Dbxref=GenBank:WP_025304365.1;Name=WP_025304365.1;gbkey=CDS;gene=sspB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312128.1;locus_tag=IY40_RS17685;product=ClpXP protease specificity-enhancing factor;protein_id=WP_025304365.1;transl_table=11 NZ_JPQY01000027.1 RefSeq gene 92871 93350 . - . ID=gene-IY40_RS17690;Name=IY40_RS17690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS17690;old_locus_tag=IY40_18005 NZ_JPQY01000027.1 Protein Homology CDS 92871 93350 . - 0 ID=cds-WP_025304364.1;Parent=gene-IY40_RS17690;Dbxref=GenBank:WP_025304364.1;Name=WP_025304364.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019453125.1;locus_tag=IY40_RS17690;product=hypothetical protein;protein_id=WP_025304364.1;transl_table=11 NZ_JPQY01000027.1 RefSeq gene 93515 94933 . - . ID=gene-IY40_RS17695;Name=IY40_RS17695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS17695;old_locus_tag=IY40_18010 NZ_JPQY01000027.1 Protein Homology CDS 93515 94933 . - 0 ID=cds-WP_043141970.1;Parent=gene-IY40_RS17695;Dbxref=GenBank:WP_043141970.1;Name=WP_043141970.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229065.1;locus_tag=IY40_RS17695;product=glutamate synthase small subunit;protein_id=WP_043141970.1;transl_table=11 NZ_JPQY01000027.1 RefSeq gene 94948 99408 . - . ID=gene-IY40_RS17700;Name=gltB;gbkey=Gene;gene=gltB;gene_biotype=protein_coding;locus_tag=IY40_RS17700;old_locus_tag=IY40_18015 NZ_JPQY01000027.1 Protein Homology CDS 94948 99408 . - 0 ID=cds-WP_025304362.1;Parent=gene-IY40_RS17700;Dbxref=GenBank:WP_025304362.1;Name=WP_025304362.1;Ontology_term=GO:0006537,GO:0008152,GO:0003824,GO:0015930,GO:0016491;gbkey=CDS;gene=gltB;go_function=catalytic activity|0003824||IEA,glutamate synthase activity|0015930||IEA,oxidoreductase activity|0016491||IEA;go_process=glutamate biosynthetic process|0006537||IEA,metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229064.1;locus_tag=IY40_RS17700;product=glutamate synthase large subunit;protein_id=WP_025304362.1;transl_table=11 NZ_JPQY01000027.1 RefSeq gene 100100 101038 . + . ID=gene-IY40_RS17705;Name=IY40_RS17705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS17705;old_locus_tag=IY40_18020 NZ_JPQY01000027.1 Protein Homology CDS 100100 101038 . + 0 ID=cds-WP_043141975.1;Parent=gene-IY40_RS17705;Dbxref=GenBank:WP_043141975.1;Name=WP_043141975.1;Note=This family includes YhcC from E. coli K-12%2C an uncharacterized radical SAM protein.;Ontology_term=GO:0051536,GO:1904047;gbkey=CDS;go_function=iron-sulfur cluster binding|0051536||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019453122.1;locus_tag=IY40_RS17705;product=TIGR01212 family radical SAM protein;protein_id=WP_043141975.1;transl_table=11 NZ_JPQY01000027.1 RefSeq gene 101131 103470 . + . ID=gene-IY40_RS17710;Name=arcB;gbkey=Gene;gene=arcB;gene_biotype=protein_coding;locus_tag=IY40_RS17710;old_locus_tag=IY40_18025 NZ_JPQY01000027.1 Protein Homology CDS 101131 103470 . + 0 ID=cds-WP_025304360.1;Parent=gene-IY40_RS17710;Dbxref=GenBank:WP_025304360.1;Name=WP_025304360.1;Ontology_term=GO:0000160,GO:0006355,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=arcB;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210142.1;locus_tag=IY40_RS17710;product=aerobic respiration two-component sensor histidine kinase ArcB;protein_id=WP_025304360.1;transl_table=11 NZ_JPQY01000027.1 RefSeq gene 103708 104361 . + . ID=gene-IY40_RS17715;Name=elbB;gbkey=Gene;gene=elbB;gene_biotype=protein_coding;locus_tag=IY40_RS17715;old_locus_tag=IY40_18030 NZ_JPQY01000027.1 Protein Homology CDS 103708 104361 . + 0 ID=cds-WP_043141979.1;Parent=gene-IY40_RS17715;Dbxref=GenBank:WP_043141979.1;Name=WP_043141979.1;gbkey=CDS;gene=elbB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004937098.1;locus_tag=IY40_RS17715;product=isoprenoid biosynthesis glyoxalase ElbB;protein_id=WP_043141979.1;transl_table=11 NZ_JPQY01000027.1 RefSeq gene 104358 105089 . + . ID=gene-IY40_RS17720;Name=mtgA;gbkey=Gene;gene=mtgA;gene_biotype=protein_coding;locus_tag=IY40_RS17720;old_locus_tag=IY40_18035 NZ_JPQY01000027.1 Protein Homology CDS 104358 105089 . + 0 ID=cds-WP_025304358.1;Parent=gene-IY40_RS17720;Dbxref=GenBank:WP_025304358.1;Name=WP_025304358.1;Ontology_term=GO:0009252,GO:0016763,GO:0009274,GO:0016020;gbkey=CDS;gene=mtgA;go_component=peptidoglycan-based cell wall|0009274||IEA,membrane|0016020||IEA;go_function=pentosyltransferase activity|0016763||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004948467.1;locus_tag=IY40_RS17720;product=monofunctional biosynthetic peptidoglycan transglycosylase;protein_id=WP_025304358.1;transl_table=11 NZ_JPQY01000027.1 RefSeq gene 105129 105704 . - . ID=gene-IY40_RS17725;Name=dolP;gbkey=Gene;gene=dolP;gene_biotype=protein_coding;locus_tag=IY40_RS17725;old_locus_tag=IY40_18040 NZ_JPQY01000027.1 Protein Homology CDS 105129 105704 . - 0 ID=cds-WP_043141982.1;Parent=gene-IY40_RS17725;Dbxref=GenBank:WP_043141982.1;Name=WP_043141982.1;Ontology_term=GO:0006970;gbkey=CDS;gene=dolP;go_process=response to osmotic stress|0006970||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013098899.1;locus_tag=IY40_RS17725;product=division/outer membrane stress-associated lipid-binding lipoprotein;protein_id=WP_043141982.1;transl_table=11 NZ_JPQY01000027.1 RefSeq gene 105714 106304 . - . ID=gene-IY40_RS17730;Name=diaA;gbkey=Gene;gene=diaA;gene_biotype=protein_coding;locus_tag=IY40_RS17730;old_locus_tag=IY40_18045 NZ_JPQY01000027.1 Protein Homology CDS 105714 106304 . - 0 ID=cds-WP_004937103.1;Parent=gene-IY40_RS17730;Dbxref=GenBank:WP_004937103.1;Name=WP_004937103.1;gbkey=CDS;gene=diaA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228994.1;locus_tag=IY40_RS17730;product=DnaA initiator-associating protein DiaA;protein_id=WP_004937103.1;transl_table=11 NZ_JPQY01000027.1 RefSeq gene 106356 106709 . - . ID=gene-IY40_RS17735;Name=IY40_RS17735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS17735;old_locus_tag=IY40_18050 NZ_JPQY01000027.1 Protein Homology CDS 106356 106709 . - 0 ID=cds-WP_015379164.1;Parent=gene-IY40_RS17735;Dbxref=GenBank:WP_015379164.1;Name=WP_015379164.1;Ontology_term=GO:0003676,GO:0004518;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,nuclease activity|0004518||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004948459.1;locus_tag=IY40_RS17735;product=YraN family protein;protein_id=WP_015379164.1;transl_table=11 NZ_JPQY01000027.1 RefSeq gene 106706 108745 . - . ID=gene-IY40_RS17740;Name=IY40_RS17740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS17740;old_locus_tag=IY40_18055 NZ_JPQY01000027.1 Protein Homology CDS 106706 108745 . - 0 ID=cds-WP_043141990.1;Parent=gene-IY40_RS17740;Dbxref=GenBank:WP_043141990.1;Name=WP_043141990.1;Ontology_term=GO:0008360,GO:0009252,GO:0004553,GO:0019899,GO:0030234;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA,enzyme binding|0019899||IEA,enzyme regulator activity|0030234||IEA;go_process=regulation of cell shape|0008360||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011193138.1;locus_tag=IY40_RS17740;product=penicillin-binding protein activator;protein_id=WP_043141990.1;transl_table=11 NZ_JPQY01000027.1 RefSeq gene 108808 109671 . + . ID=gene-IY40_RS17745;Name=rsmI;gbkey=Gene;gene=rsmI;gene_biotype=protein_coding;locus_tag=IY40_RS17745;old_locus_tag=IY40_18060 NZ_JPQY01000027.1 Protein Homology CDS 108808 109671 . + 0 ID=cds-WP_043141995.1;Parent=gene-IY40_RS17745;Dbxref=GenBank:WP_043141995.1;Name=WP_043141995.1;Ontology_term=GO:0008168;gbkey=CDS;gene=rsmI;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004958195.1;locus_tag=IY40_RS17745;product=16S rRNA (cytidine(1402)-2'-O)-methyltransferase;protein_id=WP_043141995.1;transl_table=11 NZ_JPQY01000027.1 RefSeq gene 109713 110090 . + . ID=gene-IY40_RS24845;Name=rnpB;gbkey=Gene;gene=rnpB;gene_biotype=RNase_P_RNA;locus_tag=IY40_RS24845;old_locus_tag=IY40_18630 NZ_JPQY01000027.1 cmsearch RNase_P_RNA 109713 110090 . + . ID=rna-IY40_RS24845;Parent=gene-IY40_RS24845;Dbxref=RFAM:RF00010;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=IY40_RS24845;product=RNase P RNA component class A NZ_JPQY01000027.1 cmsearch exon 109713 110090 . + . ID=exon-IY40_RS24845-1;Parent=rna-IY40_RS24845;Dbxref=RFAM:RF00010;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=IY40_RS24845;product=RNase P RNA component class A NZ_JPQY01000027.1 RefSeq gene 110149 110850 . - . ID=gene-IY40_RS17750;Name=IY40_RS17750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS17750;old_locus_tag=IY40_18065 NZ_JPQY01000027.1 Protein Homology CDS 110149 110850 . - 0 ID=cds-WP_043141999.1;Parent=gene-IY40_RS17750;Dbxref=GenBank:WP_043141999.1;Name=WP_043141999.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015585680.1;locus_tag=IY40_RS17750;product=pirin family protein;protein_id=WP_043141999.1;transl_table=11 NZ_JPQY01000027.1 RefSeq gene 110958 111854 . + . ID=gene-IY40_RS17755;Name=IY40_RS17755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS17755;old_locus_tag=IY40_18070 NZ_JPQY01000027.1 Protein Homology CDS 110958 111854 . + 0 ID=cds-WP_043142002.1;Parent=gene-IY40_RS17755;Dbxref=GenBank:WP_043142002.1;Name=WP_043142002.1;Ontology_term=GO:0001216,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription activator activity|0001216||IEA,DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005188368.1;locus_tag=IY40_RS17755;product=LysR family transcriptional regulator;protein_id=WP_043142002.1;transl_table=11 NZ_JPQY01000027.1 RefSeq gene 111905 112891 . - . ID=gene-IY40_RS17760;Name=IY40_RS17760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS17760;old_locus_tag=IY40_18075 NZ_JPQY01000027.1 Protein Homology CDS 111905 112891 . - 0 ID=cds-WP_043142006.1;Parent=gene-IY40_RS17760;Dbxref=GenBank:WP_043142006.1;Name=WP_043142006.1;Ontology_term=GO:0004364,GO:0016491;gbkey=CDS;go_function=glutathione transferase activity|0004364||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004937116.1;locus_tag=IY40_RS17760;product=glutathione S-transferase family protein;protein_id=WP_043142006.1;transl_table=11 NZ_JPQY01000027.1 RefSeq gene 112963 113358 . - . ID=gene-IY40_RS17765;Name=IY40_RS17765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS17765;old_locus_tag=IY40_18080 NZ_JPQY01000027.1 Protein Homology CDS 112963 113358 . - 0 ID=cds-WP_004937119.1;Parent=gene-IY40_RS17765;Dbxref=GenBank:WP_004937119.1;Name=WP_004937119.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008503138.1;locus_tag=IY40_RS17765;product=DoxX family protein;protein_id=WP_004937119.1;transl_table=11 NZ_JPQY01000027.1 RefSeq gene 113654 113941 . - . ID=gene-IY40_RS17770;Name=IY40_RS17770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS17770;old_locus_tag=IY40_18085 NZ_JPQY01000027.1 Protein Homology CDS 113654 113941 . - 0 ID=cds-WP_004937121.1;Parent=gene-IY40_RS17770;Dbxref=GenBank:WP_004937121.1;Name=WP_004937121.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006328231.1;locus_tag=IY40_RS17770;product=YqjK-like family protein;protein_id=WP_004937121.1;transl_table=11 NZ_JPQY01000027.1 RefSeq gene 113938 114339 . - . ID=gene-IY40_RS17775;Name=IY40_RS17775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS17775;old_locus_tag=IY40_18090 NZ_JPQY01000027.1 Protein Homology CDS 113938 114339 . - 0 ID=cds-WP_015379160.1;Parent=gene-IY40_RS17775;Dbxref=GenBank:WP_015379160.1;Name=WP_015379160.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015379160.1;locus_tag=IY40_RS17775;product=phage holin family protein;protein_id=WP_015379160.1;transl_table=11 NZ_JPQY01000027.1 RefSeq gene 114342 114647 . - . ID=gene-IY40_RS17780;Name=IY40_RS17780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS17780;old_locus_tag=IY40_18095 NZ_JPQY01000027.1 Protein Homology CDS 114342 114647 . - 0 ID=cds-WP_004937125.1;Parent=gene-IY40_RS17780;Dbxref=GenBank:WP_004937125.1;Name=WP_004937125.1;Ontology_term=GO:0043022,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=ribosome binding|0043022||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006708628.1;locus_tag=IY40_RS17780;product=DUF883 family protein;protein_id=WP_004937125.1;transl_table=11 NZ_JPQY01000027.1 RefSeq gene 114812 115183 . - . ID=gene-IY40_RS17785;Name=IY40_RS17785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS17785;old_locus_tag=IY40_18100 NZ_JPQY01000027.1 Protein Homology CDS 114812 115183 . - 0 ID=cds-WP_025304353.1;Parent=gene-IY40_RS17785;Dbxref=GenBank:WP_025304353.1;Name=WP_025304353.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019453111.1;locus_tag=IY40_RS17785;product=DUF1090 domain-containing protein;protein_id=WP_025304353.1;transl_table=11 NZ_JPQY01000027.1 RefSeq gene 115426 115800 . - . ID=gene-IY40_RS17790;Name=mzrA;gbkey=Gene;gene=mzrA;gene_biotype=protein_coding;locus_tag=IY40_RS17790;old_locus_tag=IY40_18105 NZ_JPQY01000027.1 Protein Homology CDS 115426 115800 . - 0 ID=cds-WP_004937130.1;Parent=gene-IY40_RS17790;Dbxref=GenBank:WP_004937130.1;Name=WP_004937130.1;gbkey=CDS;gene=mzrA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004937130.1;locus_tag=IY40_RS17790;product=EnvZ/OmpR regulon moderator MzrA;protein_id=WP_004937130.1;transl_table=11 NZ_JPQY01000027.1 RefSeq gene 115797 116477 . - . ID=gene-IY40_RS17795;Name=IY40_RS17795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS17795;old_locus_tag=IY40_18110 NZ_JPQY01000027.1 Protein Homology CDS 115797 116477 . - 0 ID=cds-WP_025304352.1;Parent=gene-IY40_RS17795;Dbxref=GenBank:WP_025304352.1;Name=WP_025304352.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019453110.1;locus_tag=IY40_RS17795;product=DedA family protein;protein_id=WP_025304352.1;transl_table=11 NZ_JPQY01000027.1 RefSeq gene 116614 117060 . - . ID=gene-IY40_RS17800;Name=IY40_RS17800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS17800;old_locus_tag=IY40_18115 NZ_JPQY01000027.1 Protein Homology CDS 116614 117060 . - 0 ID=cds-WP_025304351.1;Parent=gene-IY40_RS17800;Dbxref=GenBank:WP_025304351.1;Name=WP_025304351.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019453109.1;locus_tag=IY40_RS17800;product=hypothetical protein;protein_id=WP_025304351.1;transl_table=11 NZ_JPQY01000027.1 RefSeq gene 117247 118023 . - . ID=gene-IY40_RS17805;Name=exuR;gbkey=Gene;gene=exuR;gene_biotype=protein_coding;locus_tag=IY40_RS17805;old_locus_tag=IY40_18120 NZ_JPQY01000027.1 Protein Homology CDS 117247 118023 . - 0 ID=cds-WP_033636102.1;Parent=gene-IY40_RS17805;Dbxref=GenBank:WP_033636102.1;Name=WP_033636102.1;gbkey=CDS;gene=exuR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004948422.1;locus_tag=IY40_RS17805;product=transcriptional regulator ExuR;protein_id=WP_033636102.1;transl_table=11 NZ_JPQY01000027.1 RefSeq gene 118142 119440 . - . ID=gene-IY40_RS17810;Name=IY40_RS17810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS17810;old_locus_tag=IY40_18125 NZ_JPQY01000027.1 Protein Homology CDS 118142 119440 . - 0 ID=cds-WP_043142012.1;Parent=gene-IY40_RS17810;Dbxref=GenBank:WP_043142012.1;Name=WP_043142012.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013814653.1;locus_tag=IY40_RS17810;product=MFS transporter;protein_id=WP_043142012.1;transl_table=11 NZ_JPQY01000027.1 RefSeq gene 119725 121137 . + . ID=gene-IY40_RS17815;Name=uxaC;gbkey=Gene;gene=uxaC;gene_biotype=protein_coding;locus_tag=IY40_RS17815;old_locus_tag=IY40_18130 NZ_JPQY01000027.1 Protein Homology CDS 119725 121137 . + 0 ID=cds-WP_043142016.1;Parent=gene-IY40_RS17815;Dbxref=GenBank:WP_043142016.1;Name=WP_043142016.1;Ontology_term=GO:0006064,GO:0008880;gbkey=CDS;gene=uxaC;go_function=glucuronate isomerase activity|0008880||IEA;go_process=glucuronate catabolic process|0006064||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017894123.1;locus_tag=IY40_RS17815;product=glucuronate isomerase;protein_id=WP_043142016.1;transl_table=11 NZ_JPQY01000027.1 RefSeq gene 121158 122645 . + . ID=gene-IY40_RS17820;Name=IY40_RS17820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS17820;old_locus_tag=IY40_18135 NZ_JPQY01000027.1 Protein Homology CDS 121158 122645 . + 0 ID=cds-WP_043142020.1;Parent=gene-IY40_RS17820;Dbxref=GenBank:WP_043142020.1;Name=WP_043142020.1;Ontology_term=GO:0016829;gbkey=CDS;go_function=lyase activity|0016829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013316279.1;locus_tag=IY40_RS17820;product=UxaA family hydrolase;protein_id=WP_043142020.1;transl_table=11 NZ_JPQY01000027.1 RefSeq gene 122699 123934 . - . ID=gene-IY40_RS17825;Name=sstT;gbkey=Gene;gene=sstT;gene_biotype=protein_coding;locus_tag=IY40_RS17825;old_locus_tag=IY40_18140 NZ_JPQY01000027.1 Protein Homology CDS 122699 123934 . - 0 ID=cds-WP_043142023.1;Parent=gene-IY40_RS17825;Dbxref=GenBank:WP_043142023.1;Name=WP_043142023.1;Ontology_term=GO:0015826,GO:0032329,GO:0015293,GO:0016020;gbkey=CDS;gene=sstT;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA;go_process=threonine transport|0015826||IEA,serine transport|0032329||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015379154.1;locus_tag=IY40_RS17825;product=serine/threonine transporter SstT;protein_id=WP_043142023.1;transl_table=11 NZ_JPQY01000027.1 RefSeq gene 124197 125165 . - . ID=gene-IY40_RS17830;Name=IY40_RS17830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS17830;old_locus_tag=IY40_18145 NZ_JPQY01000027.1 Protein Homology CDS 124197 125165 . - 0 ID=cds-WP_043142026.1;Parent=gene-IY40_RS17830;Dbxref=GenBank:WP_043142026.1;Name=WP_043142026.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015379153.1;locus_tag=IY40_RS17830;product=TerC family protein;protein_id=WP_043142026.1;transl_table=11 NZ_JPQY01000027.1 RefSeq gene 125418 126149 . - . ID=gene-IY40_RS17835;Name=IY40_RS17835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS17835;old_locus_tag=IY40_18150 NZ_JPQY01000027.1 Protein Homology CDS 125418 126149 . - 0 ID=cds-WP_043142030.1;Parent=gene-IY40_RS17835;Dbxref=GenBank:WP_043142030.1;Name=WP_043142030.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004948394.1;locus_tag=IY40_RS17835;product=glutamine amidotransferase;protein_id=WP_043142030.1;transl_table=11 NZ_JPQY01000027.1 RefSeq gene 126151 127131 . - . ID=gene-IY40_RS17840;Name=IY40_RS17840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS17840;old_locus_tag=IY40_18155 NZ_JPQY01000027.1 Protein Homology CDS 126151 127131 . - 0 ID=cds-WP_025304343.1;Parent=gene-IY40_RS17840;Dbxref=GenBank:WP_025304343.1;Name=WP_025304343.1;Ontology_term=GO:0000166,GO:0003824;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004948391.1;locus_tag=IY40_RS17840;product=Gfo/Idh/MocA family protein;protein_id=WP_025304343.1;transl_table=11 NZ_JPQY01000027.1 RefSeq gene 127182 127688 . - . ID=gene-IY40_RS17845;Name=IY40_RS17845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS17845;old_locus_tag=IY40_18160 NZ_JPQY01000027.1 Protein Homology CDS 127182 127688 . - 0 ID=cds-WP_004937154.1;Parent=gene-IY40_RS17845;Dbxref=GenBank:WP_004937154.1;Name=WP_004937154.1;Ontology_term=GO:0008270,GO:0016787,GO:0046872;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004948389.1;locus_tag=IY40_RS17845;product=M48 metallopeptidase family protein;protein_id=WP_004937154.1;transl_table=11 NZ_JPQY01000027.1 RefSeq gene 127838 128977 . + . ID=gene-IY40_RS17850;Name=rlmG;gbkey=Gene;gene=rlmG;gene_biotype=protein_coding;locus_tag=IY40_RS17850;old_locus_tag=IY40_18165 NZ_JPQY01000027.1 Protein Homology CDS 127838 128977 . + 0 ID=cds-WP_043142033.1;Parent=gene-IY40_RS17850;Dbxref=GenBank:WP_043142033.1;Name=WP_043142033.1;Ontology_term=GO:0031167,GO:0003676,GO:0008990;gbkey=CDS;gene=rlmG;go_function=nucleic acid binding|0003676||IEA,rRNA (guanine-N2-)-methyltransferase activity|0008990||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015379148.1;locus_tag=IY40_RS17850;product=23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG;protein_id=WP_043142033.1;transl_table=11 NZ_JPQY01000027.1 RefSeq gene 129012 131033 . - . ID=gene-IY40_RS17855;Name=IY40_RS17855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS17855;old_locus_tag=IY40_18170 NZ_JPQY01000027.1 Protein Homology CDS 129012 131033 . - 0 ID=cds-WP_043142035.1;Parent=gene-IY40_RS17855;Dbxref=GenBank:WP_043142035.1;Name=WP_043142035.1;Ontology_term=GO:0010181,GO:0016491;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002429085.1;locus_tag=IY40_RS17855;product=oxidoreductase;protein_id=WP_043142035.1;transl_table=11 NZ_JPQY01000027.1 RefSeq gene 131341 132960 . + . ID=gene-IY40_RS17860;Name=IY40_RS17860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS17860;old_locus_tag=IY40_18175 NZ_JPQY01000027.1 Protein Homology CDS 131341 132960 . + 0 ID=cds-WP_043142037.1;Parent=gene-IY40_RS17860;Dbxref=GenBank:WP_043142037.1;Name=WP_043142037.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019453098.1;locus_tag=IY40_RS17860;product=ABC-F family ATP-binding cassette domain-containing protein;protein_id=WP_043142037.1;transl_table=11 NZ_JPQY01000027.1 RefSeq gene 132974 134464 . - . ID=gene-IY40_RS17865;Name=pdxR;gbkey=Gene;gene=pdxR;gene_biotype=protein_coding;locus_tag=IY40_RS17865;old_locus_tag=IY40_18180 NZ_JPQY01000027.1 Protein Homology CDS 132974 134464 . - 0 ID=cds-WP_043142041.1;Parent=gene-IY40_RS17865;Dbxref=GenBank:WP_043142041.1;Name=WP_043142041.1;Ontology_term=GO:0042823,GO:2000142,GO:0070279;gbkey=CDS;gene=pdxR;go_function=vitamin B6 binding|0070279||IEA;go_process=pyridoxal phosphate biosynthetic process|0042823||IEA,regulation of DNA-templated transcription initiation|2000142||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008458570.1;locus_tag=IY40_RS17865;product=MocR-like pyridoxine biosynthesis transcription factor PdxR;protein_id=WP_043142041.1;transl_table=11 NZ_JPQY01000027.1 RefSeq gene 134586 135851 . + . ID=gene-IY40_RS17870;Name=IY40_RS17870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS17870;old_locus_tag=IY40_18185 NZ_JPQY01000027.1 Protein Homology CDS 134586 135851 . + 0 ID=cds-WP_043142044.1;Parent=gene-IY40_RS17870;Dbxref=GenBank:WP_043142044.1;Name=WP_043142044.1;Ontology_term=GO:0009448,GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;go_process=gamma-aminobutyric acid metabolic process|0009448||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019453096.1;locus_tag=IY40_RS17870;product=4-aminobutyrate--2-oxoglutarate transaminase;protein_id=WP_043142044.1;transl_table=11 NZ_JPQY01000027.1 RefSeq gene 135864 137318 . + . ID=gene-IY40_RS17875;Name=IY40_RS17875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS17875;old_locus_tag=IY40_18190 NZ_JPQY01000027.1 Protein Homology CDS 135864 137318 . + 0 ID=cds-WP_043142047.1;Parent=gene-IY40_RS17875;Dbxref=GenBank:WP_043142047.1;Name=WP_043142047.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017894111.1;locus_tag=IY40_RS17875;product=NAD-dependent succinate-semialdehyde dehydrogenase;protein_id=WP_043142047.1;transl_table=11 NZ_JPQY01000027.1 RefSeq gene 137377 138618 . + . ID=gene-IY40_RS17880;Name=IY40_RS17880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS17880;old_locus_tag=IY40_18195 NZ_JPQY01000027.1 Protein Homology CDS 137377 138618 . + 0 ID=cds-WP_043142048.1;Parent=gene-IY40_RS17880;Dbxref=GenBank:WP_043142048.1;Name=WP_043142048.1;Ontology_term=GO:0003333;gbkey=CDS;go_process=amino acid transmembrane transport|0003333||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229278.1;locus_tag=IY40_RS17880;product=aromatic amino acid transport family protein;protein_id=WP_043142048.1;transl_table=11 NZ_JPQY01000027.1 RefSeq gene 138692 139327 . - . ID=gene-IY40_RS17885;Name=yfcF;gbkey=Gene;gene=yfcF;gene_biotype=protein_coding;locus_tag=IY40_RS17885;old_locus_tag=IY40_18200 NZ_JPQY01000027.1 Protein Homology CDS 138692 139327 . - 0 ID=cds-WP_004937171.1;Parent=gene-IY40_RS17885;Dbxref=GenBank:WP_004937171.1;Name=WP_004937171.1;Ontology_term=GO:0006749;gbkey=CDS;gene=yfcF;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004937171.1;locus_tag=IY40_RS17885;product=glutathione transferase;protein_id=WP_004937171.1;transl_table=11 NZ_JPQY01000027.1 RefSeq gene 139498 140214 . + . ID=gene-IY40_RS17890;Name=IY40_RS17890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS17890;old_locus_tag=IY40_18205 NZ_JPQY01000027.1 Protein Homology CDS 139498 140214 . + 0 ID=cds-WP_025304335.1;Parent=gene-IY40_RS17890;Dbxref=GenBank:WP_025304335.1;Name=WP_025304335.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016930165.1;locus_tag=IY40_RS17890;product=HPP family protein;protein_id=WP_025304335.1;transl_table=11 NZ_JPQY01000027.1 RefSeq gene 140228 140977 . - . ID=gene-IY40_RS17895;Name=IY40_RS17895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS17895;old_locus_tag=IY40_18210 NZ_JPQY01000027.1 Protein Homology CDS 140228 140977 . - 0 ID=cds-WP_197538603.1;Parent=gene-IY40_RS17895;Dbxref=GenBank:WP_197538603.1;Name=WP_197538603.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010275791.1;locus_tag=IY40_RS17895;product=helix-turn-helix transcriptional regulator;protein_id=WP_197538603.1;transl_table=11 NZ_JPQY01000027.1 RefSeq gene 141126 141767 . - . ID=gene-IY40_RS17900;Name=IY40_RS17900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS17900;old_locus_tag=IY40_18215 NZ_JPQY01000027.1 Protein Homology CDS 141126 141767 . - 0 ID=cds-WP_043142050.1;Parent=gene-IY40_RS17900;Dbxref=GenBank:WP_043142050.1;Name=WP_043142050.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013813665.1;locus_tag=IY40_RS17900;product=YbhB/YbcL family Raf kinase inhibitor-like protein;protein_id=WP_043142050.1;transl_table=11 NZ_JPQY01000027.1 RefSeq gene 142057 142497 . - . ID=gene-IY40_RS17905;Name=aac(6');gbkey=Gene;gene=aac(6');gene_biotype=protein_coding;locus_tag=IY40_RS17905;old_locus_tag=IY40_18220 NZ_JPQY01000027.1 Protein Homology CDS 142057 142497 . - 0 ID=cds-WP_025304332.1;Parent=gene-IY40_RS17905;Dbxref=GenBank:WP_025304332.1;Name=WP_025304332.1;gbkey=CDS;gene=aac(6');inference=COORDINATES: similar to AA sequence:RefSeq:WP_033649026.1;locus_tag=IY40_RS17905;product=aminoglycoside 6'-N-acetyltransferase;protein_id=WP_025304332.1;transl_table=11 NZ_JPQY01000027.1 RefSeq gene 142673 143308 . + . ID=gene-IY40_RS17910;Name=IY40_RS17910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS17910;old_locus_tag=IY40_18225 NZ_JPQY01000027.1 GeneMarkS-2+ CDS 142673 143308 . + 0 ID=cds-WP_043142051.1;Parent=gene-IY40_RS17910;Dbxref=GenBank:WP_043142051.1;Name=WP_043142051.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IY40_RS17910;product=hypothetical protein;protein_id=WP_043142051.1;transl_table=11 NZ_JPQY01000027.1 RefSeq gene 143574 143795 . + . ID=gene-IY40_RS17915;Name=IY40_RS17915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS17915 NZ_JPQY01000027.1 GeneMarkS-2+ CDS 143574 143795 . + 0 ID=cds-WP_043142054.1;Parent=gene-IY40_RS17915;Dbxref=GenBank:WP_043142054.1;Name=WP_043142054.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IY40_RS17915;product=hypothetical protein;protein_id=WP_043142054.1;transl_table=11 NZ_JPQY01000027.1 RefSeq gene 143902 143977 . - . ID=gene-IY40_RS17920;Name=IY40_RS17920;gbkey=Gene;gene_biotype=tRNA;locus_tag=IY40_RS17920;old_locus_tag=IY40_18235 NZ_JPQY01000027.1 tRNAscan-SE tRNA 143902 143977 . - . ID=rna-IY40_RS17920;Parent=gene-IY40_RS17920;anticodon=(pos:complement(143942..143944));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=IY40_RS17920;product=tRNA-Ile NZ_JPQY01000027.1 tRNAscan-SE exon 143902 143977 . - . ID=exon-IY40_RS17920-1;Parent=rna-IY40_RS17920;anticodon=(pos:complement(143942..143944));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=IY40_RS17920;product=tRNA-Ile NZ_JPQY01000027.1 RefSeq gene 144124 144612 . + . ID=gene-IY40_RS17925;Name=mug;gbkey=Gene;gene=mug;gene_biotype=protein_coding;locus_tag=IY40_RS17925;old_locus_tag=IY40_18240 NZ_JPQY01000027.1 Protein Homology CDS 144124 144612 . + 0 ID=cds-WP_025304328.1;Parent=gene-IY40_RS17925;Dbxref=GenBank:WP_025304328.1;Name=WP_025304328.1;Ontology_term=GO:0006285,GO:0000700;gbkey=CDS;gene=mug;go_function=mismatch base pair DNA N-glycosylase activity|0000700||IEA;go_process=base-excision repair%2C AP site formation|0006285||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012146998.1;locus_tag=IY40_RS17925;product=G/U mismatch-specific DNA glycosylase;protein_id=WP_025304328.1;transl_table=11 NZ_JPQY01000027.1 RefSeq gene 144637 145080 . + . ID=gene-IY40_RS17930;Name=IY40_RS17930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS17930;old_locus_tag=IY40_18245 NZ_JPQY01000027.1 Protein Homology CDS 144637 145080 . + 0 ID=cds-WP_025304327.1;Parent=gene-IY40_RS17930;Dbxref=GenBank:WP_025304327.1;Name=WP_025304327.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004850850.1;locus_tag=IY40_RS17930;product=nuclear transport factor 2 family protein;protein_id=WP_025304327.1;transl_table=11 NZ_JPQY01000027.1 RefSeq gene 145136 146977 . - . ID=gene-IY40_RS17935;Name=rpoD;gbkey=Gene;gene=rpoD;gene_biotype=protein_coding;locus_tag=IY40_RS17935;old_locus_tag=IY40_18250 NZ_JPQY01000027.1 Protein Homology CDS 145136 146977 . - 0 ID=cds-WP_043142056.1;Parent=gene-IY40_RS17935;Dbxref=GenBank:WP_043142056.1;Name=WP_043142056.1;Ontology_term=GO:0006355,GO:0003700,GO:0016987;gbkey=CDS;gene=rpoD;go_function=DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017493531.1;locus_tag=IY40_RS17935;product=RNA polymerase sigma factor RpoD;protein_id=WP_043142056.1;transl_table=11 NZ_JPQY01000027.1 RefSeq gene 147135 148883 . - . ID=gene-IY40_RS17940;Name=dnaG;gbkey=Gene;gene=dnaG;gene_biotype=protein_coding;locus_tag=IY40_RS17940;old_locus_tag=IY40_18255 NZ_JPQY01000027.1 Protein Homology CDS 147135 148883 . - 0 ID=cds-WP_025304325.1;Parent=gene-IY40_RS17940;Dbxref=GenBank:WP_025304325.1;Name=WP_025304325.1;Ontology_term=GO:0006269,GO:0003899;gbkey=CDS;gene=dnaG;go_function=DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA replication%2C synthesis of primer|0006269||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006328193.1;locus_tag=IY40_RS17940;product=DNA primase;protein_id=WP_025304325.1;transl_table=11 NZ_JPQY01000027.1 RefSeq gene 149020 149235 . - . ID=gene-IY40_RS25420;Name=rpsU;gbkey=Gene;gene=rpsU;gene_biotype=protein_coding;locus_tag=IY40_RS25420 NZ_JPQY01000027.1 Protein Homology CDS 149020 149235 . - 0 ID=cds-WP_001144069.1;Parent=gene-IY40_RS25420;Dbxref=GenBank:WP_001144069.1;Name=WP_001144069.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsU;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311975.1;locus_tag=IY40_RS25420;product=30S ribosomal protein S21;protein_id=WP_001144069.1;transl_table=11 NZ_JPQY01000027.1 RefSeq gene 149561 150574 . + . ID=gene-IY40_RS17945;Name=tsaD;gbkey=Gene;gene=tsaD;gene_biotype=protein_coding;locus_tag=IY40_RS17945;old_locus_tag=IY40_18260 NZ_JPQY01000027.1 Protein Homology CDS 149561 150574 . + 0 ID=cds-WP_025304324.1;Parent=gene-IY40_RS17945;Dbxref=GenBank:WP_025304324.1;Name=WP_025304324.1;Ontology_term=GO:0002949;gbkey=CDS;gene=tsaD;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012146995.1;locus_tag=IY40_RS17945;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD;protein_id=WP_025304324.1;transl_table=11 NZ_JPQY01000027.1 RefSeq gene 150605 151249 . - . ID=gene-IY40_RS17950;Name=plsY;gbkey=Gene;gene=plsY;gene_biotype=protein_coding;locus_tag=IY40_RS17950;old_locus_tag=IY40_18265 NZ_JPQY01000027.1 Protein Homology CDS 150605 151249 . - 0 ID=cds-WP_025304323.1;Parent=gene-IY40_RS17950;Dbxref=GenBank:WP_025304323.1;Name=WP_025304323.1;Ontology_term=GO:0006654,GO:0008374,GO:0005886;gbkey=CDS;gene=plsY;go_component=plasma membrane|0005886||IEA;go_function=O-acyltransferase activity|0008374||IEA;go_process=phosphatidic acid biosynthetic process|0006654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017894060.1;locus_tag=IY40_RS17950;product=glycerol-3-phosphate 1-O-acyltransferase PlsY;protein_id=WP_025304323.1;transl_table=11 NZ_JPQY01000027.1 RefSeq gene 151357 151716 . + . ID=gene-IY40_RS17955;Name=folB;gbkey=Gene;gene=folB;gene_biotype=protein_coding;locus_tag=IY40_RS17955;old_locus_tag=IY40_18270 NZ_JPQY01000027.1 Protein Homology CDS 151357 151716 . + 0 ID=cds-WP_004937203.1;Parent=gene-IY40_RS17955;Dbxref=GenBank:WP_004937203.1;Name=WP_004937203.1;Ontology_term=GO:0006760,GO:0004150;gbkey=CDS;gene=folB;go_function=dihydroneopterin aldolase activity|0004150||IEA;go_process=folic acid-containing compound metabolic process|0006760||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006709084.1;locus_tag=IY40_RS17955;product=bifunctional dihydroneopterin aldolase/7%2C8-dihydroneopterin epimerase;protein_id=WP_004937203.1;transl_table=11 NZ_JPQY01000027.1 RefSeq gene 151849 152673 . + . ID=gene-IY40_RS17960;Name=bacA;gbkey=Gene;gene=bacA;gene_biotype=protein_coding;locus_tag=IY40_RS17960;old_locus_tag=IY40_18275 NZ_JPQY01000027.1 Protein Homology CDS 151849 152673 . + 0 ID=cds-WP_004937204.1;Parent=gene-IY40_RS17960;Dbxref=GenBank:WP_004937204.1;Name=WP_004937204.1;Ontology_term=GO:0016311,GO:0050380,GO:0016020;gbkey=CDS;gene=bacA;go_component=membrane|0016020||IEA;go_function=undecaprenyl-diphosphatase activity|0050380||IEA;go_process=dephosphorylation|0016311||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004704480.1;locus_tag=IY40_RS17960;product=undecaprenyl-diphosphate phosphatase;protein_id=WP_004937204.1;transl_table=11 NZ_JPQY01000027.1 RefSeq gene 152713 153957 . - . ID=gene-IY40_RS17965;Name=IY40_RS17965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS17965;old_locus_tag=IY40_18280 NZ_JPQY01000027.1 Protein Homology CDS 152713 153957 . - 0 ID=cds-WP_025304322.1;Parent=gene-IY40_RS17965;Dbxref=GenBank:WP_025304322.1;Name=WP_025304322.1;Ontology_term=GO:0001680,GO:0003723,GO:0004810,GO:0005524;gbkey=CDS;go_function=RNA binding|0003723||IEA,CCA tRNA nucleotidyltransferase activity|0004810||IEA,ATP binding|0005524||IEA;go_process=tRNA 3'-terminal CCA addition|0001680||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006328189.1;locus_tag=IY40_RS17965;product=multifunctional CCA addition/repair protein;protein_id=WP_025304322.1;transl_table=11 NZ_JPQY01000027.1 RefSeq gene 154080 154700 . - . ID=gene-IY40_RS17970;Name=IY40_RS17970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS17970;old_locus_tag=IY40_18285 NZ_JPQY01000027.1 Protein Homology CDS 154080 154700 . - 0 ID=cds-WP_016930153.1;Parent=gene-IY40_RS17970;Dbxref=GenBank:WP_016930153.1;Name=WP_016930153.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005271065.1;locus_tag=IY40_RS17970;product=TIGR04211 family SH3 domain-containing protein;protein_id=WP_016930153.1;transl_table=11 NZ_JPQY01000027.1 RefSeq gene 154979 156286 . + . ID=gene-IY40_RS17975;Name=IY40_RS17975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS17975;old_locus_tag=IY40_18290 NZ_JPQY01000027.1 Protein Homology CDS 154979 156286 . + 0 ID=cds-WP_043142059.1;Parent=gene-IY40_RS17975;Dbxref=GenBank:WP_043142059.1;Name=WP_043142059.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013650449.1;locus_tag=IY40_RS17975;product=CYTH domain-containing protein;protein_id=WP_043142059.1;transl_table=11 NZ_JPQY01000027.1 RefSeq gene 156332 159169 . + . ID=gene-IY40_RS17980;Name=glnE;gbkey=Gene;gene=glnE;gene_biotype=protein_coding;locus_tag=IY40_RS17980;old_locus_tag=IY40_18295 NZ_JPQY01000027.1 Protein Homology CDS 156332 159169 . + 0 ID=cds-WP_043142061.1;Parent=gene-IY40_RS17980;Dbxref=GenBank:WP_043142061.1;Name=WP_043142061.1;Ontology_term=GO:0008882;gbkey=CDS;gene=glnE;go_function=[glutamate-ammonia-ligase] adenylyltransferase activity|0008882||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004937212.1;locus_tag=IY40_RS17980;product=bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase;protein_id=WP_043142061.1;transl_table=11 NZ_JPQY01000027.1 RefSeq gene 159247 160677 . + . ID=gene-IY40_RS17985;Name=hldE;gbkey=Gene;gene=hldE;gene_biotype=protein_coding;locus_tag=IY40_RS17985;old_locus_tag=IY40_18300 NZ_JPQY01000027.1 Protein Homology CDS 159247 160677 . + 0 ID=cds-WP_043142063.1;Parent=gene-IY40_RS17985;Dbxref=GenBank:WP_043142063.1;Name=WP_043142063.1;Ontology_term=GO:0005975,GO:0009058,GO:0016779;gbkey=CDS;gene=hldE;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=carbohydrate metabolic process|0005975||IEA,biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019082324.1;locus_tag=IY40_RS17985;product=bifunctional D-glycero-beta-D-manno-heptose-7-phosphate kinase/D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase HldE;protein_id=WP_043142063.1;transl_table=11 NZ_JPQY01000027.1 RefSeq gene 160739 161014 . - . ID=gene-IY40_RS17990;Name=ubiK;gbkey=Gene;gene=ubiK;gene_biotype=protein_coding;gene_synonym=yqiC;locus_tag=IY40_RS17990;old_locus_tag=IY40_18305 NZ_JPQY01000027.1 Protein Homology CDS 160739 161014 . - 0 ID=cds-WP_004937216.1;Parent=gene-IY40_RS17990;Dbxref=GenBank:WP_004937216.1;Name=WP_004937216.1;Ontology_term=GO:0006744,GO:0042802;gbkey=CDS;gene=ubiK;go_function=identical protein binding|0042802||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004937216.1;locus_tag=IY40_RS17990;product=ubiquinone biosynthesis accessory factor UbiK;protein_id=WP_004937216.1;transl_table=11 NZ_JPQY01000027.1 cmsearch riboswitch 161160 161320 . + . ID=id-NZ_JPQY01000027.1:161160..161320;Dbxref=RFAM:RF00050;Note=FMN riboswitch;bound_moiety=flavin mononucleotide;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_JPQY01000027.1 RefSeq gene 161430 162083 . + . ID=gene-IY40_RS17995;Name=ribB;gbkey=Gene;gene=ribB;gene_biotype=protein_coding;locus_tag=IY40_RS17995;old_locus_tag=IY40_18310 NZ_JPQY01000027.1 Protein Homology CDS 161430 162083 . + 0 ID=cds-WP_004937218.1;Parent=gene-IY40_RS17995;Dbxref=GenBank:WP_004937218.1;Name=WP_004937218.1;Ontology_term=GO:0008686;gbkey=CDS;gene=ribB;go_function=3%2C4-dihydroxy-2-butanone-4-phosphate synthase activity|0008686||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212190.1;locus_tag=IY40_RS17995;product=3%2C4-dihydroxy-2-butanone-4-phosphate synthase;protein_id=WP_004937218.1;transl_table=11 NZ_JPQY01000027.1 RefSeq gene 162137 163669 . - . ID=gene-IY40_RS18000;Name=IY40_RS18000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS18000;old_locus_tag=IY40_18315 NZ_JPQY01000027.1 Protein Homology CDS 162137 163669 . - 0 ID=cds-WP_043142066.1;Parent=gene-IY40_RS18000;Dbxref=GenBank:WP_043142066.1;Name=WP_043142066.1;Ontology_term=GO:0016791;gbkey=CDS;go_function=phosphatase activity|0016791||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016930150.1;locus_tag=IY40_RS18000;product=alkaline phosphatase;protein_id=WP_043142066.1;transl_table=11 NZ_JPQY01000027.1 RefSeq gene 163995 164777 . + . ID=gene-IY40_RS18005;Name=ygiD;gbkey=Gene;gene=ygiD;gene_biotype=protein_coding;locus_tag=IY40_RS18005;old_locus_tag=IY40_18325 NZ_JPQY01000027.1 Protein Homology CDS 163995 164777 . + 0 ID=cds-WP_043142068.1;Parent=gene-IY40_RS18005;Dbxref=GenBank:WP_043142068.1;Name=WP_043142068.1;gbkey=CDS;gene=ygiD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004948311.1;locus_tag=IY40_RS18005;product=4%2C5-DOPA-extradiol-dioxygenase;protein_id=WP_043142068.1;transl_table=11 NZ_JPQY01000027.1 RefSeq gene 164826 165986 . - . ID=gene-IY40_RS18010;Name=IY40_RS18010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS18010;old_locus_tag=IY40_18330 NZ_JPQY01000027.1 Protein Homology CDS 164826 165986 . - 0 ID=cds-WP_025304316.1;Parent=gene-IY40_RS18010;Dbxref=GenBank:WP_025304316.1;Name=WP_025304316.1;Ontology_term=GO:0005524,GO:0016874,GO:0046872;gbkey=CDS;go_function=ATP binding|0005524||IEA,ligase activity|0016874||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013814624.1;locus_tag=IY40_RS18010;product=glutathionylspermidine synthase family protein;protein_id=WP_025304316.1;transl_table=11 NZ_JPQY01000027.1 RefSeq gene 165990 166652 . - . ID=gene-IY40_RS18015;Name=IY40_RS18015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS18015;old_locus_tag=IY40_18335 NZ_JPQY01000027.1 Protein Homology CDS 165990 166652 . - 0 ID=cds-WP_025304315.1;Parent=gene-IY40_RS18015;Dbxref=GenBank:WP_025304315.1;Name=WP_025304315.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012146973.1;locus_tag=IY40_RS18015;product=DUF1190 family protein;protein_id=WP_025304315.1;transl_table=11 NZ_JPQY01000027.1 RefSeq gene 167006 168106 . + . ID=gene-IY40_RS18020;Name=IY40_RS18020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS18020;old_locus_tag=IY40_18340 NZ_JPQY01000027.1 Protein Homology CDS 167006 168106 . + 0 ID=cds-WP_043142071.1;Parent=gene-IY40_RS18020;Dbxref=GenBank:WP_043142071.1;Name=WP_043142071.1;Ontology_term=GO:0008270,GO:0008888,GO:0030554;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,glycerol dehydrogenase (NAD+) activity|0008888||IEA,adenyl nucleotide binding|0030554||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019453071.1;locus_tag=IY40_RS18020;product=glycerol dehydrogenase;protein_id=WP_043142071.1;transl_table=11 NZ_JPQY01000027.1 RefSeq gene 168158 169228 . + . ID=gene-IY40_RS18025;Name=dhaK;gbkey=Gene;gene=dhaK;gene_biotype=protein_coding;locus_tag=IY40_RS18025;old_locus_tag=IY40_18345 NZ_JPQY01000027.1 Protein Homology CDS 168158 169228 . + 0 ID=cds-WP_043142075.1;Parent=gene-IY40_RS18025;Dbxref=GenBank:WP_043142075.1;Name=WP_043142075.1;Ontology_term=GO:0006071,GO:0004371;gbkey=CDS;gene=dhaK;go_function=glycerone kinase activity|0004371||IEA;go_process=glycerol metabolic process|0006071||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006328171.1;locus_tag=IY40_RS18025;product=dihydroxyacetone kinase subunit DhaK;protein_id=WP_043142075.1;transl_table=11 NZ_JPQY01000027.1 RefSeq gene 169238 169870 . + . ID=gene-IY40_RS18030;Name=dhaL;gbkey=Gene;gene=dhaL;gene_biotype=protein_coding;locus_tag=IY40_RS18030;old_locus_tag=IY40_18350 NZ_JPQY01000027.1 Protein Homology CDS 169238 169870 . + 0 ID=cds-WP_043142078.1;Parent=gene-IY40_RS18030;Dbxref=GenBank:WP_043142078.1;Name=WP_043142078.1;Ontology_term=GO:0006071,GO:0047324;gbkey=CDS;gene=dhaL;go_function=phosphoenolpyruvate-glycerone phosphotransferase activity|0047324||IEA;go_process=glycerol metabolic process|0006071||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004937232.1;locus_tag=IY40_RS18030;product=dihydroxyacetone kinase subunit DhaL;protein_id=WP_043142078.1;transl_table=11 NZ_JPQY01000027.1 RefSeq gene 169882 171312 . + . ID=gene-IY40_RS18035;Name=dhaM;gbkey=Gene;gene=dhaM;gene_biotype=protein_coding;locus_tag=IY40_RS18035;old_locus_tag=IY40_18355 NZ_JPQY01000027.1 Protein Homology CDS 169882 171312 . + 0 ID=cds-WP_043142081.1;Parent=gene-IY40_RS18035;Dbxref=GenBank:WP_043142081.1;Name=WP_043142081.1;Ontology_term=GO:0009401,GO:0016310,GO:0019563,GO:0047324,GO:0016020;gbkey=CDS;gene=dhaM;go_component=membrane|0016020||IEA;go_function=phosphoenolpyruvate-glycerone phosphotransferase activity|0047324||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA,glycerol catabolic process|0019563||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006320589.1;locus_tag=IY40_RS18035;product=dihydroxyacetone kinase phosphoryl donor subunit DhaM;protein_id=WP_043142081.1;transl_table=11 NZ_JPQY01000027.1 RefSeq gene 171309 173258 . - . ID=gene-IY40_RS18040;Name=dhaR;gbkey=Gene;gene=dhaR;gene_biotype=protein_coding;locus_tag=IY40_RS18040;old_locus_tag=IY40_18360 NZ_JPQY01000027.1 Protein Homology CDS 171309 173258 . - 0 ID=cds-WP_043142085.1;Parent=gene-IY40_RS18040;Dbxref=GenBank:WP_043142085.1;Name=WP_043142085.1;Ontology_term=GO:0006355,GO:0005524,GO:0008134,GO:0043565;gbkey=CDS;gene=dhaR;go_function=ATP binding|0005524||IEA,transcription factor binding|0008134||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015379083.1;locus_tag=IY40_RS18040;product=dihydroxyacetone kinase operon transcriptional regulator DhaR;protein_id=WP_043142085.1;transl_table=11 NZ_JPQY01000027.1 RefSeq gene 173409 174926 . - . ID=gene-IY40_RS18045;Name=hasF;gbkey=Gene;gene=hasF;gene_biotype=protein_coding;locus_tag=IY40_RS18045;old_locus_tag=IY40_18365 NZ_JPQY01000027.1 Protein Homology CDS 173409 174926 . - 0 ID=cds-WP_025304309.1;Parent=gene-IY40_RS18045;Dbxref=GenBank:WP_025304309.1;Name=WP_025304309.1;gbkey=CDS;gene=hasF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_033649067.1;locus_tag=IY40_RS18045;product=multidrug efflux transporter outer membrane subunit HasF;protein_id=WP_025304309.1;transl_table=11 NZ_JPQY01000027.1 RefSeq gene 175274 175906 . + . ID=gene-IY40_RS18050;Name=nudF;gbkey=Gene;gene=nudF;gene_biotype=protein_coding;locus_tag=IY40_RS18050;old_locus_tag=IY40_18370 NZ_JPQY01000027.1 Protein Homology CDS 175274 175906 . + 0 ID=cds-WP_043142088.1;Parent=gene-IY40_RS18050;Dbxref=GenBank:WP_043142088.1;Name=WP_043142088.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;gene=nudF;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004937242.1;locus_tag=IY40_RS18050;product=ADP-ribose diphosphatase;protein_id=WP_043142088.1;transl_table=11 NZ_JPQY01000027.1 RefSeq gene 175906 176331 . + . ID=gene-IY40_RS18055;Name=IY40_RS18055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS18055;old_locus_tag=IY40_18375 NZ_JPQY01000027.1 Protein Homology CDS 175906 176331 . + 0 ID=cds-WP_004937244.1;Parent=gene-IY40_RS18055;Dbxref=GenBank:WP_004937244.1;Name=WP_004937244.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004948286.1;locus_tag=IY40_RS18055;product=DUF1249 family protein;protein_id=WP_004937244.1;transl_table=11 NZ_JPQY01000027.1 RefSeq gene 176359 177186 . + . ID=gene-IY40_RS18060;Name=cpdA;gbkey=Gene;gene=cpdA;gene_biotype=protein_coding;locus_tag=IY40_RS18060;old_locus_tag=IY40_18380 NZ_JPQY01000027.1 Protein Homology CDS 176359 177186 . + 0 ID=cds-WP_004937250.1;Parent=gene-IY40_RS18060;Dbxref=GenBank:WP_004937250.1;Name=WP_004937250.1;Ontology_term=GO:0004115;gbkey=CDS;gene=cpdA;go_function=3'%2C5'-cyclic-AMP phosphodiesterase activity|0004115||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005180337.1;locus_tag=IY40_RS18060;product=3'%2C5'-cyclic-AMP phosphodiesterase;protein_id=WP_004937250.1;transl_table=11 NZ_JPQY01000027.1 RefSeq gene 177186 177770 . + . ID=gene-IY40_RS18065;Name=yqiA;gbkey=Gene;gene=yqiA;gene_biotype=protein_coding;locus_tag=IY40_RS18065;old_locus_tag=IY40_18385 NZ_JPQY01000027.1 Protein Homology CDS 177186 177770 . + 0 ID=cds-WP_025304306.1;Parent=gene-IY40_RS18065;Dbxref=GenBank:WP_025304306.1;Name=WP_025304306.1;gbkey=CDS;gene=yqiA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004937252.1;locus_tag=IY40_RS18065;product=esterase YqiA;protein_id=WP_025304306.1;transl_table=11 NZ_JPQY01000027.1 RefSeq gene 177817 179712 . + . ID=gene-IY40_RS18070;Name=parE;gbkey=Gene;gene=parE;gene_biotype=protein_coding;locus_tag=IY40_RS18070;old_locus_tag=IY40_18390 NZ_JPQY01000027.1 Protein Homology CDS 177817 179712 . + 0 ID=cds-WP_025304305.1;Parent=gene-IY40_RS18070;Dbxref=GenBank:WP_025304305.1;Name=WP_025304305.1;Ontology_term=GO:0006265,GO:0003677,GO:0003918,GO:0005524,GO:0005694;gbkey=CDS;gene=parE;go_component=chromosome|0005694||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA,ATP binding|0005524||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016257886.1;locus_tag=IY40_RS18070;product=DNA topoisomerase IV subunit B;protein_id=WP_025304305.1;transl_table=11 NZ_JPQY01000027.1 RefSeq gene 179794 180690 . + . ID=gene-IY40_RS18075;Name=IY40_RS18075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS18075;old_locus_tag=IY40_18395 NZ_JPQY01000027.1 Protein Homology CDS 179794 180690 . + 0 ID=cds-WP_043142091.1;Parent=gene-IY40_RS18075;Dbxref=GenBank:WP_043142091.1;Name=WP_043142091.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016930138.1;locus_tag=IY40_RS18075;product=LysR substrate-binding domain-containing protein;protein_id=WP_043142091.1;transl_table=11 NZ_JPQY01000027.1 RefSeq gene 180699 181007 . - . ID=gene-IY40_RS18080;Name=IY40_RS18080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS18080;old_locus_tag=IY40_18400 NZ_JPQY01000027.1 Protein Homology CDS 180699 181007 . - 0 ID=cds-WP_043142094.1;Parent=gene-IY40_RS18080;Dbxref=GenBank:WP_043142094.1;Name=WP_043142094.1;Ontology_term=GO:0017000,GO:0004497,GO:0016491;gbkey=CDS;go_function=monooxygenase activity|0004497||IEA,oxidoreductase activity|0016491||IEA;go_process=antibiotic biosynthetic process|0017000||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012146960.1;locus_tag=IY40_RS18080;product=putative quinol monooxygenase;protein_id=WP_043142094.1;transl_table=11 NZ_JPQY01000027.1 RefSeq gene 181041 181622 . - . ID=gene-IY40_RS18085;Name=IY40_RS18085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS18085;old_locus_tag=IY40_18405 NZ_JPQY01000027.1 Protein Homology CDS 181041 181622 . - 0 ID=cds-WP_025304302.1;Parent=gene-IY40_RS18085;Dbxref=GenBank:WP_025304302.1;Name=WP_025304302.1;Ontology_term=GO:0008753,GO:0009055,GO:0010181,GO:0050136;gbkey=CDS;go_function=NADPH dehydrogenase (quinone) activity|0008753||IEA,electron transfer activity|0009055||IEA,FMN binding|0010181||IEA,NADH dehydrogenase (quinone) (non-electrogenic) activity|0050136||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006328163.1;locus_tag=IY40_RS18085;product=NAD(P)H-dependent oxidoreductase;protein_id=WP_025304302.1;transl_table=11 NZ_JPQY01000027.1 RefSeq gene 181948 184221 . + . ID=gene-IY40_RS18090;Name=parC;gbkey=Gene;gene=parC;gene_biotype=protein_coding;locus_tag=IY40_RS18090;old_locus_tag=IY40_18410 NZ_JPQY01000027.1 Protein Homology CDS 181948 184221 . + 0 ID=cds-WP_025304301.1;Parent=gene-IY40_RS18090;Dbxref=GenBank:WP_025304301.1;Name=WP_025304301.1;Ontology_term=GO:0006265,GO:0003918,GO:0009340;gbkey=CDS;gene=parC;go_component=DNA topoisomerase IV complex|0009340||IEA;go_function=DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011906164.1;locus_tag=IY40_RS18090;product=DNA topoisomerase IV subunit A;protein_id=WP_025304301.1;transl_table=11 NZ_JPQY01000027.1 RefSeq gene 184468 185202 . + . ID=gene-IY40_RS18095;Name=IY40_RS18095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS18095;old_locus_tag=IY40_18415 NZ_JPQY01000027.1 Protein Homology CDS 184468 185202 . + 0 ID=cds-WP_025304300.1;Parent=gene-IY40_RS18095;Dbxref=GenBank:WP_025304300.1;Name=WP_025304300.1;Ontology_term=GO:0008654,GO:0003841,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=1-acylglycerol-3-phosphate O-acyltransferase activity|0003841||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002223690.1;locus_tag=IY40_RS18095;product=1-acylglycerol-3-phosphate O-acyltransferase;protein_id=WP_025304300.1;transl_table=11 NZ_JPQY01000027.1 RefSeq gene 185335 186750 . + . ID=gene-IY40_RS18100;Name=ftsP;gbkey=Gene;gene=ftsP;gene_biotype=protein_coding;locus_tag=IY40_RS18100;old_locus_tag=IY40_18420 NZ_JPQY01000027.1 Protein Homology CDS 185335 186750 . + 0 ID=cds-WP_025304299.1;Parent=gene-IY40_RS18100;Dbxref=GenBank:WP_025304299.1;Name=WP_025304299.1;Ontology_term=GO:0043093,GO:0016491;gbkey=CDS;gene=ftsP;go_function=oxidoreductase activity|0016491||IEA;go_process=FtsZ-dependent cytokinesis|0043093||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004937270.1;locus_tag=IY40_RS18100;product=cell division protein FtsP;protein_id=WP_025304299.1;transl_table=11 NZ_JPQY01000027.1 RefSeq gene 186768 187679 . - . ID=gene-IY40_RS18105;Name=IY40_RS18105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS18105;old_locus_tag=IY40_18425 NZ_JPQY01000027.1 Protein Homology CDS 186768 187679 . - 0 ID=cds-WP_043142098.1;Parent=gene-IY40_RS18105;Dbxref=GenBank:WP_043142098.1;Name=WP_043142098.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015379078.1;locus_tag=IY40_RS18105;product=LysR family transcriptional regulator;protein_id=WP_043142098.1;transl_table=11 NZ_JPQY01000027.1 RefSeq gene 187816 188637 . + . ID=gene-IY40_RS18110;Name=xapA;gbkey=Gene;gene=xapA;gene_biotype=protein_coding;locus_tag=IY40_RS18110;old_locus_tag=IY40_18430 NZ_JPQY01000027.1 Protein Homology CDS 187816 188637 . + 0 ID=cds-WP_043142102.1;Parent=gene-IY40_RS18110;Dbxref=GenBank:WP_043142102.1;Name=WP_043142102.1;Ontology_term=GO:0055086,GO:0004731,GO:0005737;gbkey=CDS;gene=xapA;go_component=cytoplasm|0005737||IEA;go_function=purine-nucleoside phosphorylase activity|0004731||IEA;go_process=nucleobase-containing small molecule metabolic process|0055086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016930133.1;locus_tag=IY40_RS18110;product=xanthosine phosphorylase;protein_id=WP_043142102.1;transl_table=11 NZ_JPQY01000027.1 RefSeq gene 188719 189969 . + . ID=gene-IY40_RS18115;Name=IY40_RS18115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS18115;old_locus_tag=IY40_18435 NZ_JPQY01000027.1 Protein Homology CDS 188719 189969 . + 0 ID=cds-WP_025304296.1;Parent=gene-IY40_RS18115;Dbxref=GenBank:WP_025304296.1;Name=WP_025304296.1;Ontology_term=GO:0015858,GO:0055085,GO:0015506,GO:0022857;gbkey=CDS;go_function=nucleoside:proton symporter activity|0015506||IEA,transmembrane transporter activity|0022857||IEA;go_process=nucleoside transport|0015858||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008461055.1;locus_tag=IY40_RS18115;product=nucleoside permease;protein_id=WP_025304296.1;transl_table=11 NZ_JPQY01000027.1 RefSeq gene 190004 190936 . - . ID=gene-IY40_RS18120;Name=IY40_RS18120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS18120;old_locus_tag=IY40_18440 NZ_JPQY01000027.1 Protein Homology CDS 190004 190936 . - 0 ID=cds-WP_043142104.1;Parent=gene-IY40_RS18120;Dbxref=GenBank:WP_043142104.1;Name=WP_043142104.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004937278.1;locus_tag=IY40_RS18120;product=PfkB family carbohydrate kinase;protein_id=WP_043142104.1;transl_table=11 NZ_JPQY01000027.1 RefSeq gene 190933 192330 . - . ID=gene-IY40_RS18125;Name=IY40_RS18125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS18125;old_locus_tag=IY40_18445 NZ_JPQY01000027.1 Protein Homology CDS 190933 192330 . - 0 ID=cds-WP_043142107.1;Parent=gene-IY40_RS18125;Dbxref=GenBank:WP_043142107.1;Name=WP_043142107.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004937281.1;locus_tag=IY40_RS18125;product=purine-cytosine permease family protein;protein_id=WP_043142107.1;transl_table=11 NZ_JPQY01000027.1 RefSeq gene 192988 193722 . + . ID=gene-IY40_RS18130;Name=IY40_RS18130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS18130;old_locus_tag=IY40_18450 NZ_JPQY01000027.1 Protein Homology CDS 192988 193722 . + 0 ID=cds-WP_043142111.1;Parent=gene-IY40_RS18130;Dbxref=GenBank:WP_043142111.1;Name=WP_043142111.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015379075.1;locus_tag=IY40_RS18130;product=GntR family transcriptional regulator;protein_id=WP_043142111.1;transl_table=11 NZ_JPQY01000027.1 RefSeq gene 193803 195971 . + . ID=gene-IY40_RS18135;Name=IY40_RS18135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS18135;old_locus_tag=IY40_18455 NZ_JPQY01000027.1 Protein Homology CDS 193803 195971 . + 0 ID=cds-WP_025304292.1;Parent=gene-IY40_RS18135;Dbxref=GenBank:WP_025304292.1;Name=WP_025304292.1;Ontology_term=GO:1904047;gbkey=CDS;go_function=S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013814606.1;locus_tag=IY40_RS18135;product=YgiQ family radical SAM protein;protein_id=WP_025304292.1;transl_table=11 NZ_JPQY01000027.1 RefSeq gene 196035 196640 . - . ID=gene-IY40_RS18140;Name=IY40_RS18140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS18140;old_locus_tag=IY40_18460 NZ_JPQY01000027.1 Protein Homology CDS 196035 196640 . - 0 ID=cds-WP_025304291.1;Parent=gene-IY40_RS18140;Dbxref=GenBank:WP_025304291.1;Name=WP_025304291.1;Ontology_term=GO:0000270,GO:0071555,GO:0008933;gbkey=CDS;go_function=peptidoglycan lytic transglycosylase activity|0008933||IEA;go_process=peptidoglycan metabolic process|0000270||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016930129.1;locus_tag=IY40_RS18140;product=transglycosylase SLT domain-containing protein;protein_id=WP_025304291.1;transl_table=11 NZ_JPQY01000027.1 RefSeq gene 196784 197608 . - . ID=gene-IY40_RS18145;Name=dkgA;gbkey=Gene;gene=dkgA;gene_biotype=protein_coding;locus_tag=IY40_RS18145;old_locus_tag=IY40_18465 NZ_JPQY01000027.1 Protein Homology CDS 196784 197608 . - 0 ID=cds-WP_016930128.1;Parent=gene-IY40_RS18145;Dbxref=GenBank:WP_016930128.1;Name=WP_016930128.1;Ontology_term=GO:0050580;gbkey=CDS;gene=dkgA;go_function=2%2C5-didehydrogluconate reductase activity|0050580||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004937289.1;locus_tag=IY40_RS18145;product=2%2C5-didehydrogluconate reductase DkgA;protein_id=WP_016930128.1;transl_table=11 NZ_JPQY01000027.1 RefSeq gene 197896 199059 . - . ID=gene-IY40_RS18150;Name=yqhD;gbkey=Gene;gene=yqhD;gene_biotype=protein_coding;locus_tag=IY40_RS18150;old_locus_tag=IY40_18470 NZ_JPQY01000027.1 Protein Homology CDS 197896 199059 . - 0 ID=cds-WP_025304289.1;Parent=gene-IY40_RS18150;Dbxref=GenBank:WP_025304289.1;Name=WP_025304289.1;Ontology_term=GO:0046872,GO:1990362;gbkey=CDS;gene=yqhD;go_function=metal ion binding|0046872||IEA,butanol dehydrogenase (NAD+) activity|1990362||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228858.1;locus_tag=IY40_RS18150;product=alcohol dehydrogenase;protein_id=WP_025304289.1;transl_table=11 NZ_JPQY01000027.1 RefSeq gene 199286 200173 . + . ID=gene-IY40_RS18155;Name=IY40_RS18155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS18155;old_locus_tag=IY40_18475 NZ_JPQY01000027.1 Protein Homology CDS 199286 200173 . + 0 ID=cds-WP_405051121.1;Parent=gene-IY40_RS18155;Dbxref=GenBank:WP_405051121.1;Name=WP_405051121.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011091982.1;locus_tag=IY40_RS18155;product=AraC family transcriptional regulator;protein_id=WP_405051121.1;transl_table=11 NZ_JPQY01000027.1 RefSeq gene 200181 201209 . - . ID=gene-IY40_RS18160;Name=IY40_RS18160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS18160;old_locus_tag=IY40_18480 NZ_JPQY01000027.1 Protein Homology CDS 200181 201209 . - 0 ID=cds-WP_043142117.1;Parent=gene-IY40_RS18160;Dbxref=GenBank:WP_043142117.1;Name=WP_043142117.1;Ontology_term=GO:0008270,GO:0016491,GO:0030554;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,oxidoreductase activity|0016491||IEA,adenyl nucleotide binding|0030554||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019453045.1;locus_tag=IY40_RS18160;product=zinc-dependent alcohol dehydrogenase family protein;protein_id=WP_043142117.1;transl_table=11 NZ_JPQY01000027.1 RefSeq gene 201317 202237 . + . ID=gene-IY40_RS18165;Name=IY40_RS18165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS18165;old_locus_tag=IY40_18485 NZ_JPQY01000027.1 Protein Homology CDS 201317 202237 . + 0 ID=cds-WP_025304286.1;Parent=gene-IY40_RS18165;Dbxref=GenBank:WP_025304286.1;Name=WP_025304286.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016930125.1;locus_tag=IY40_RS18165;product=LysR family transcriptional regulator;protein_id=WP_025304286.1;transl_table=11 NZ_JPQY01000027.1 RefSeq gene 202248 202910 . - . ID=gene-IY40_RS18170;Name=IY40_RS18170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS18170;old_locus_tag=IY40_18490 NZ_JPQY01000027.1 Protein Homology CDS 202248 202910 . - 0 ID=cds-WP_025304285.1;Parent=gene-IY40_RS18170;Dbxref=GenBank:WP_025304285.1;Name=WP_025304285.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012146912.1;locus_tag=IY40_RS18170;product=DedA family protein;protein_id=WP_025304285.1;transl_table=11 NZ_JPQY01000027.1 RefSeq gene 203056 204252 . - . ID=gene-IY40_RS18175;Name=metC;gbkey=Gene;gene=metC;gene_biotype=protein_coding;locus_tag=IY40_RS18175;old_locus_tag=IY40_18495 NZ_JPQY01000027.1 Protein Homology CDS 203056 204252 . - 0 ID=cds-WP_043142120.1;Parent=gene-IY40_RS18175;Dbxref=GenBank:WP_043142120.1;Name=WP_043142120.1;Ontology_term=GO:0006520,GO:0019346,GO:0030170,GO:0047804;gbkey=CDS;gene=metC;go_function=pyridoxal phosphate binding|0030170||IEA,cysteine-S-conjugate beta-lyase activity|0047804||IEA;go_process=amino acid metabolic process|0006520||IEA,transsulfuration|0019346||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013814596.1;locus_tag=IY40_RS18175;product=cystathionine beta-lyase;protein_id=WP_043142120.1;transl_table=11 NZ_JPQY01000027.1 RefSeq gene 204684 205661 . + . ID=gene-IY40_RS18180;Name=exbB;gbkey=Gene;gene=exbB;gene_biotype=protein_coding;locus_tag=IY40_RS18180;old_locus_tag=IY40_18500 NZ_JPQY01000027.1 Protein Homology CDS 204684 205661 . + 0 ID=cds-WP_080287144.1;Parent=gene-IY40_RS18180;Dbxref=GenBank:WP_080287144.1;Name=WP_080287144.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=exbB;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004948220.1;locus_tag=IY40_RS18180;product=tol-pal system-associated acyl-CoA thioesterase;protein_id=WP_080287144.1;transl_table=11 NZ_JPQY01000027.1 RefSeq gene 205665 206087 . + . ID=gene-IY40_RS18185;Name=exbD;gbkey=Gene;gene=exbD;gene_biotype=protein_coding;locus_tag=IY40_RS18185;old_locus_tag=IY40_18505 NZ_JPQY01000027.1 Protein Homology CDS 205665 206087 . + 0 ID=cds-WP_004937307.1;Parent=gene-IY40_RS18185;Dbxref=GenBank:WP_004937307.1;Name=WP_004937307.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=exbD;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006320636.1;locus_tag=IY40_RS18185;product=TonB system transport protein ExbD;protein_id=WP_004937307.1;transl_table=11 NZ_JPQY01000027.1 RefSeq gene 206143 207186 . - . ID=gene-IY40_RS18190;Name=IY40_RS18190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS18190;old_locus_tag=IY40_18510 NZ_JPQY01000027.1 Protein Homology CDS 206143 207186 . - 0 ID=cds-WP_025304281.1;Parent=gene-IY40_RS18190;Dbxref=GenBank:WP_025304281.1;Name=WP_025304281.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015379068.1;locus_tag=IY40_RS18190;product=substrate-binding domain-containing protein;protein_id=WP_025304281.1;transl_table=11 NZ_JPQY01000027.1 RefSeq gene 207208 208617 . - . ID=gene-IY40_RS18195;Name=IY40_RS18195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS18195;old_locus_tag=IY40_18515 NZ_JPQY01000027.1 Protein Homology CDS 207208 208617 . - 0 ID=cds-WP_043142163.1;Parent=gene-IY40_RS18195;Dbxref=GenBank:WP_043142163.1;Name=WP_043142163.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005270818.1;locus_tag=IY40_RS18195;product=glycoside hydrolase family 32 protein;protein_id=WP_043142163.1;transl_table=11 NZ_JPQY01000027.1 RefSeq gene 208617 209987 . - . ID=gene-IY40_RS18200;Name=IY40_RS18200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS18200;old_locus_tag=IY40_18520 NZ_JPQY01000027.1 Protein Homology CDS 208617 209987 . - 0 ID=cds-WP_043142125.1;Parent=gene-IY40_RS18200;Dbxref=GenBank:WP_043142125.1;Name=WP_043142125.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004948206.1;locus_tag=IY40_RS18200;product=sucrose-specific PTS transporter subunit IIBC;protein_id=WP_043142125.1;transl_table=11 NZ_JPQY01000027.1 RefSeq gene 210051 211460 . - . ID=gene-IY40_RS18205;Name=IY40_RS18205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS18205;old_locus_tag=IY40_18525 NZ_JPQY01000027.1 Protein Homology CDS 210051 211460 . - 0 ID=cds-WP_025304278.1;Parent=gene-IY40_RS18205;Dbxref=GenBank:WP_025304278.1;Name=WP_025304278.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017893997.1;locus_tag=IY40_RS18205;product=carbohydrate porin;protein_id=WP_025304278.1;transl_table=11 NZ_JPQY01000027.1 RefSeq gene 211658 212584 . - . ID=gene-IY40_RS18210;Name=IY40_RS18210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS18210;old_locus_tag=IY40_18530 NZ_JPQY01000027.1 Protein Homology CDS 211658 212584 . - 0 ID=cds-WP_043142128.1;Parent=gene-IY40_RS18210;Dbxref=GenBank:WP_043142128.1;Name=WP_043142128.1;Ontology_term=GO:0016301;gbkey=CDS;go_function=kinase activity|0016301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015379064.1;locus_tag=IY40_RS18210;product=aminoimidazole riboside kinase;protein_id=WP_043142128.1;transl_table=11 NZ_JPQY01000027.1 RefSeq gene 212762 214288 . - . ID=gene-IY40_RS18215;Name=abgT;gbkey=Gene;gene=abgT;gene_biotype=protein_coding;locus_tag=IY40_RS18215;old_locus_tag=IY40_18535 NZ_JPQY01000027.1 Protein Homology CDS 212762 214288 . - 0 ID=cds-WP_025304276.1;Parent=gene-IY40_RS18215;Dbxref=GenBank:WP_025304276.1;Name=WP_025304276.1;gbkey=CDS;gene=abgT;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012146901.1;locus_tag=IY40_RS18215;product=p-aminobenzoyl-glutamate transporter;protein_id=WP_025304276.1;transl_table=11 NZ_JPQY01000027.1 RefSeq gene 214389 215840 . - . ID=gene-IY40_RS18220;Name=IY40_RS18220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS18220;old_locus_tag=IY40_18540 NZ_JPQY01000027.1 Protein Homology CDS 214389 215840 . - 0 ID=cds-WP_043142132.1;Parent=gene-IY40_RS18220;Dbxref=GenBank:WP_043142132.1;Name=WP_043142132.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015379063.1;locus_tag=IY40_RS18220;product=M20 family metallopeptidase;protein_id=WP_043142132.1;transl_table=11 NZ_JPQY01000027.1 RefSeq gene 215837 217153 . - . ID=gene-IY40_RS18225;Name=IY40_RS18225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS18225;old_locus_tag=IY40_18545 NZ_JPQY01000027.1 Protein Homology CDS 215837 217153 . - 0 ID=cds-WP_043142136.1;Parent=gene-IY40_RS18225;Dbxref=GenBank:WP_043142136.1;Name=WP_043142136.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004937326.1;locus_tag=IY40_RS18225;product=M20 family metallo-hydrolase;protein_id=WP_043142136.1;transl_table=11 NZ_JPQY01000027.1 RefSeq gene 217426 218322 . + . ID=gene-IY40_RS18230;Name=IY40_RS18230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS18230;old_locus_tag=IY40_18550 NZ_JPQY01000027.1 Protein Homology CDS 217426 218322 . + 0 ID=cds-WP_025304273.1;Parent=gene-IY40_RS18230;Dbxref=GenBank:WP_025304273.1;Name=WP_025304273.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013359824.1;locus_tag=IY40_RS18230;product=LysR family transcriptional regulator;protein_id=WP_025304273.1;transl_table=11 NZ_JPQY01000027.1 RefSeq gene 218351 220474 . - . ID=gene-IY40_RS18235;Name=IY40_RS18235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS18235;old_locus_tag=IY40_18555 NZ_JPQY01000027.1 Protein Homology CDS 218351 220474 . - 0 ID=cds-WP_043142139.1;Parent=gene-IY40_RS18235;Dbxref=GenBank:WP_043142139.1;Name=WP_043142139.1;Ontology_term=GO:0015891,GO:0015343,GO:0038023,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=siderophore-iron transmembrane transporter activity|0015343||IEA,signaling receptor activity|0038023||IEA;go_process=siderophore transport|0015891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011815510.1;locus_tag=IY40_RS18235;product=TonB-dependent receptor family protein;protein_id=WP_043142139.1;transl_table=11 NZ_JPQY01000027.1 RefSeq gene 220635 221771 . - . ID=gene-IY40_RS18240;Name=IY40_RS18240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS18240;old_locus_tag=IY40_18560 NZ_JPQY01000027.1 Protein Homology CDS 220635 221771 . - 0 ID=cds-WP_025304271.1;Parent=gene-IY40_RS18240;Dbxref=GenBank:WP_025304271.1;Name=WP_025304271.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015379059.1;locus_tag=IY40_RS18240;product=ABC transporter substrate-binding protein;protein_id=WP_025304271.1;transl_table=11 NZ_JPQY01000027.1 RefSeq gene 221858 224002 . - . ID=gene-IY40_RS18245;Name=IY40_RS18245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS18245;old_locus_tag=IY40_18565 NZ_JPQY01000027.1 Protein Homology CDS 221858 224002 . - 0 ID=cds-WP_043142142.1;Parent=gene-IY40_RS18245;Dbxref=GenBank:WP_043142142.1;Name=WP_043142142.1;Ontology_term=GO:0034480;gbkey=CDS;go_function=phosphatidylcholine phospholipase C activity|0034480||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004948192.1;locus_tag=IY40_RS18245;product=phosphocholine-specific phospholipase C;protein_id=WP_043142142.1;transl_table=11 NZ_JPQY01000027.1 RefSeq gene 224125 224964 . - . ID=gene-IY40_RS18250;Name=queF;gbkey=Gene;gene=queF;gene_biotype=protein_coding;locus_tag=IY40_RS18250;old_locus_tag=IY40_18570 NZ_JPQY01000027.1 Protein Homology CDS 224125 224964 . - 0 ID=cds-WP_043142166.1;Parent=gene-IY40_RS18250;Dbxref=GenBank:WP_043142166.1;Name=WP_043142166.1;Note=Catalyzes the NADPH-dependent reduction of 7-cyano-7-deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) in queuosine biosynthesis;Ontology_term=GO:0008616,GO:0033739,GO:0043867;gbkey=CDS;gene=queF;go_function=preQ1 synthase activity|0033739||IEA,7-cyano-7-deazaguanine tRNA-ribosyltransferase activity|0043867||IEA;go_process=tRNA queuosine(34) biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012146896.1;locus_tag=IY40_RS18250;product=NADPH-dependent 7-cyano-7-deazaguanine reductase QueF;protein_id=WP_043142166.1;transl_table=11 NZ_JPQY01000027.1 RefSeq gene 224942 225838 . - . ID=gene-IY40_RS18255;Name=IY40_RS18255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS18255;old_locus_tag=IY40_18575 NZ_JPQY01000027.1 Protein Homology CDS 224942 225838 . - 0 ID=cds-WP_004937338.1;Parent=gene-IY40_RS18255;Dbxref=GenBank:WP_004937338.1;Name=WP_004937338.1;Ontology_term=GO:0160254;gbkey=CDS;go_process=tRNA queuosine(34) biosynthetic process from salvaged queuosine or its precursors|0160254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004937338.1;locus_tag=IY40_RS18255;product=queuosine precursor transporter;protein_id=WP_004937338.1;transl_table=11 NZ_JPQY01000027.1 RefSeq gene 225839 226453 . - . ID=gene-IY40_RS18260;Name=IY40_RS18260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS18260;old_locus_tag=IY40_18580 NZ_JPQY01000027.1 Protein Homology CDS 225839 226453 . - 0 ID=cds-WP_025304268.1;Parent=gene-IY40_RS18260;Dbxref=GenBank:WP_025304268.1;Name=WP_025304268.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012146894.1;locus_tag=IY40_RS18260;product=helix-turn-helix domain-containing protein;protein_id=WP_025304268.1;transl_table=11 NZ_JPQY01000027.1 RefSeq gene 226984 228285 . - . ID=gene-IY40_RS18265;Name=IY40_RS18265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS18265;old_locus_tag=IY40_18585 NZ_JPQY01000027.1 Protein Homology CDS 226984 228285 . - 0 ID=cds-WP_025304267.1;Parent=gene-IY40_RS18265;Dbxref=GenBank:WP_025304267.1;Name=WP_025304267.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005175249.1;locus_tag=IY40_RS18265;product=cytosine permease;protein_id=WP_025304267.1;transl_table=11 NZ_JPQY01000027.1 RefSeq gene 228306 228995 . - . ID=gene-IY40_RS18270;Name=IY40_RS18270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS18270;old_locus_tag=IY40_18590 NZ_JPQY01000027.1 Protein Homology CDS 228306 228995 . - 0 ID=cds-WP_025304266.1;Parent=gene-IY40_RS18270;Dbxref=GenBank:WP_025304266.1;Name=WP_025304266.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016266374.1;locus_tag=IY40_RS18270;product=helix-turn-helix transcriptional regulator;protein_id=WP_025304266.1;transl_table=11 NZ_JPQY01000027.1 RefSeq gene 229023 229433 . - . ID=gene-IY40_RS18275;Name=IY40_RS18275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS18275;old_locus_tag=IY40_18595 NZ_JPQY01000027.1 Protein Homology CDS 229023 229433 . - 0 ID=cds-WP_019453029.1;Parent=gene-IY40_RS18275;Dbxref=GenBank:WP_019453029.1;Name=WP_019453029.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005159173.1;locus_tag=IY40_RS18275;product=GNAT family N-acetyltransferase;protein_id=WP_019453029.1;transl_table=11 NZ_JPQY01000027.1 RefSeq gene 229851 230765 . - . ID=gene-IY40_RS18280;Name=IY40_RS18280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS18280;old_locus_tag=IY40_18600 NZ_JPQY01000027.1 Protein Homology CDS 229851 230765 . - 0 ID=cds-WP_043142169.1;Parent=gene-IY40_RS18280;Dbxref=GenBank:WP_043142169.1;Name=WP_043142169.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016930106.1;locus_tag=IY40_RS18280;product=alpha/beta hydrolase;protein_id=WP_043142169.1;transl_table=11 NZ_JPQY01000027.1 RefSeq gene 231383 232267 . - . ID=gene-IY40_RS18285;Name=IY40_RS18285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS18285;old_locus_tag=IY40_18605 NZ_JPQY01000027.1 Protein Homology CDS 231383 232267 . - 0 ID=cds-WP_043142145.1;Parent=gene-IY40_RS18285;Dbxref=GenBank:WP_043142145.1;Name=WP_043142145.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004937352.1;locus_tag=IY40_RS18285;product=ATP-grasp fold amidoligase family protein;protein_id=WP_043142145.1;transl_table=11 NZ_JPQY01000027.1 RefSeq gene 232318 233613 . - . ID=gene-IY40_RS18290;Name=IY40_RS18290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS18290;old_locus_tag=IY40_18610 NZ_JPQY01000027.1 Protein Homology CDS 232318 233613 . - 0 ID=cds-WP_025304263.1;Parent=gene-IY40_RS18290;Dbxref=GenBank:WP_025304263.1;Name=WP_025304263.1;Ontology_term=GO:0004497;gbkey=CDS;go_function=monooxygenase activity|0004497||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015379054.1;locus_tag=IY40_RS18290;product=lysine N(6)-hydroxylase/L-ornithine N(5)-oxygenase family protein;protein_id=WP_025304263.1;transl_table=11 NZ_JPQY01000027.1 RefSeq gene 234543 235403 . - . ID=gene-IY40_RS26505;Name=IY40_RS26505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS26505 NZ_JPQY01000027.1 GeneMarkS-2+ CDS 234543 235403 . - 0 ID=cds-WP_225735547.1;Parent=gene-IY40_RS26505;Dbxref=GenBank:WP_225735547.1;Name=WP_225735547.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IY40_RS26505;product=hypothetical protein;protein_id=WP_225735547.1;transl_table=11 NZ_JPQY01000027.1 RefSeq gene 235440 235922 . - . ID=gene-IY40_RS18300;Name=IY40_RS18300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS18300;old_locus_tag=IY40_18620 NZ_JPQY01000027.1 Protein Homology CDS 235440 235922 . - 0 ID=cds-WP_025304261.1;Parent=gene-IY40_RS18300;Dbxref=GenBank:WP_025304261.1;Name=WP_025304261.1;Ontology_term=GO:0033103;gbkey=CDS;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015366565.1;locus_tag=IY40_RS18300;product=Hcp family type VI secretion system effector;protein_id=WP_025304261.1;transl_table=11 NZ_JPQY01000027.1 RefSeq gene 235970 236452 . - . ID=gene-IY40_RS18305;Name=IY40_RS18305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS18305;old_locus_tag=IY40_18625 NZ_JPQY01000027.1 Protein Homology CDS 235970 236452 . - 0 ID=cds-WP_025304260.1;Parent=gene-IY40_RS18305;Dbxref=GenBank:WP_025304260.1;Name=WP_025304260.1;Ontology_term=GO:0033103;gbkey=CDS;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015366565.1;locus_tag=IY40_RS18305;product=Hcp family type VI secretion system effector;protein_id=WP_025304260.1;transl_table=11 NZ_JPQY01000027.1 RefSeq gene 236648 236942 . - . ID=gene-IY40_RS26510;Name=IY40_RS26510;end_range=236942,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS26510;partial=true NZ_JPQY01000027.1 GeneMarkS-2+ CDS 236648 236942 . - 1 ID=cds-WP_235211380.1;Parent=gene-IY40_RS26510;Dbxref=GenBank:WP_235211380.1;Name=WP_235211380.1;end_range=236942,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IY40_RS26510;partial=true;product=hypothetical protein;protein_id=WP_235211380.1;transl_table=11 ##sequence-region NZ_JPQY01000028.1 1 111275 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=615 NZ_JPQY01000028.1 RefSeq region 1 111275 . + . ID=NZ_JPQY01000028.1:1..111275;Dbxref=taxon:615;collected-by=Mahloro H. Serepa%3B Vincent M. Gray;collection-date=2013-04-11;country=South Africa: North West Province;gbkey=Src;genome=genomic;identified-by=Mahloro H. Serepa%3B Vincent M. Gray;isolation-source=entomopathogenic nematode Oscheius sp. MCB living in soil;mol_type=genomic DNA;nat-host=Oscheius sp. MCB;strain=MCB NZ_JPQY01000028.1 RefSeq pseudogene 1 415 . - . ID=gene-IY40_RS18315;Name=IY40_RS18315;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IY40_RS18315;old_locus_tag=IY40_18635;partial=true;pseudo=true;start_range=.,1 NZ_JPQY01000028.1 Protein Homology CDS 1 415 . - 0 ID=cds-IY40_RS18315;Parent=gene-IY40_RS18315;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013811079.1;locus_tag=IY40_RS18315;partial=true;product=signal recognition particle-docking protein FtsY;pseudo=true;start_range=.,1;transl_table=11 NZ_JPQY01000028.1 RefSeq gene 658 1278 . + . ID=gene-IY40_RS18320;Name=rsmD;gbkey=Gene;gene=rsmD;gene_biotype=protein_coding;locus_tag=IY40_RS18320;old_locus_tag=IY40_18640 NZ_JPQY01000028.1 Protein Homology CDS 658 1278 . + 0 ID=cds-WP_025304896.1;Parent=gene-IY40_RS18320;Dbxref=GenBank:WP_025304896.1;Name=WP_025304896.1;Ontology_term=GO:0031167,GO:0003676,GO:0008168;gbkey=CDS;gene=rsmD;go_function=nucleic acid binding|0003676||IEA,methyltransferase activity|0008168||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006323064.1;locus_tag=IY40_RS18320;product=16S rRNA (guanine(966)-N(2))-methyltransferase;protein_id=WP_025304896.1;transl_table=11 NZ_JPQY01000028.1 RefSeq gene 1268 1540 . + . ID=gene-IY40_RS18325;Name=IY40_RS18325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS18325;old_locus_tag=IY40_18645 NZ_JPQY01000028.1 Protein Homology CDS 1268 1540 . + 0 ID=cds-WP_004934327.1;Parent=gene-IY40_RS18325;Dbxref=GenBank:WP_004934327.1;Name=WP_004934327.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005163952.1;locus_tag=IY40_RS18325;product=DUF1145 family protein;protein_id=WP_004934327.1;transl_table=11 NZ_JPQY01000028.1 RefSeq gene 1544 1900 . - . ID=gene-IY40_RS18330;Name=IY40_RS18330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS18330;old_locus_tag=IY40_18650 NZ_JPQY01000028.1 Protein Homology CDS 1544 1900 . - 0 ID=cds-WP_025304895.1;Parent=gene-IY40_RS18330;Dbxref=GenBank:WP_025304895.1;Name=WP_025304895.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015376283.1;locus_tag=IY40_RS18330;product=DUF2500 domain-containing protein;protein_id=WP_025304895.1;transl_table=11 NZ_JPQY01000028.1 RefSeq gene 2060 2686 . + . ID=gene-IY40_RS18335;Name=IY40_RS18335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS18335;old_locus_tag=IY40_18655 NZ_JPQY01000028.1 Protein Homology CDS 2060 2686 . + 0 ID=cds-WP_025304894.1;Parent=gene-IY40_RS18335;Dbxref=GenBank:WP_025304894.1;Name=WP_025304894.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211498.1;locus_tag=IY40_RS18335;product=lysoplasmalogenase;protein_id=WP_025304894.1;transl_table=11 NZ_JPQY01000028.1 RefSeq gene 2727 3104 . - . ID=gene-IY40_RS18340;Name=IY40_RS18340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS18340;old_locus_tag=IY40_18660 NZ_JPQY01000028.1 Protein Homology CDS 2727 3104 . - 0 ID=cds-WP_025304893.1;Parent=gene-IY40_RS18340;Dbxref=GenBank:WP_025304893.1;Name=WP_025304893.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015376281.1;locus_tag=IY40_RS18340;product=AprI/Inh family metalloprotease inhibitor;protein_id=WP_025304893.1;transl_table=11 NZ_JPQY01000028.1 RefSeq gene 3159 4622 . - . ID=gene-IY40_RS18345;Name=IY40_RS18345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS18345;old_locus_tag=IY40_18665 NZ_JPQY01000028.1 Protein Homology CDS 3159 4622 . - 0 ID=cds-WP_025304892.1;Parent=gene-IY40_RS18345;Dbxref=GenBank:WP_025304892.1;Name=WP_025304892.1;Ontology_term=GO:0006508,GO:0004222,GO:0046872,GO:0005615;gbkey=CDS;go_component=extracellular space|0005615||IEA;go_function=metalloendopeptidase activity|0004222||IEA,metal ion binding|0046872||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006317219.1;locus_tag=IY40_RS18345;product=serralysin family metalloprotease;protein_id=WP_025304892.1;transl_table=11 NZ_JPQY01000028.1 RefSeq gene 5306 7624 . + . ID=gene-IY40_RS18350;Name=IY40_RS18350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS18350;old_locus_tag=IY40_18670 NZ_JPQY01000028.1 Protein Homology CDS 5306 7624 . + 0 ID=cds-WP_043142194.1;Parent=gene-IY40_RS18350;Dbxref=GenBank:WP_043142194.1;Name=WP_043142194.1;Ontology_term=GO:0006812,GO:0019829;gbkey=CDS;go_function=ATPase-coupled monoatomic cation transmembrane transporter activity|0019829||IEA;go_process=monoatomic cation transport|0006812||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015376279.1;locus_tag=IY40_RS18350;product=zinc/cadmium/mercury/lead-transporting ATPase;protein_id=WP_043142194.1;transl_table=11 NZ_JPQY01000028.1 RefSeq gene 7713 7958 . - . ID=gene-IY40_RS18355;Name=tusA;gbkey=Gene;gene=tusA;gene_biotype=protein_coding;locus_tag=IY40_RS18355;old_locus_tag=IY40_18675 NZ_JPQY01000028.1 Protein Homology CDS 7713 7958 . - 0 ID=cds-WP_025304890.1;Parent=gene-IY40_RS18355;Dbxref=GenBank:WP_025304890.1;Name=WP_025304890.1;Ontology_term=GO:0002143,GO:0097163;gbkey=CDS;gene=tusA;go_function=sulfur carrier activity|0097163||IEA;go_process=tRNA wobble position uridine thiolation|0002143||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013811073.1;locus_tag=IY40_RS18355;product=sulfurtransferase TusA;protein_id=WP_025304890.1;transl_table=11 NZ_JPQY01000028.1 RefSeq gene 8179 8838 . + . ID=gene-IY40_RS18360;Name=IY40_RS18360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS18360;old_locus_tag=IY40_18680 NZ_JPQY01000028.1 Protein Homology CDS 8179 8838 . + 0 ID=cds-WP_043142197.1;Parent=gene-IY40_RS18360;Dbxref=GenBank:WP_043142197.1;Name=WP_043142197.1;Ontology_term=GO:0160254;gbkey=CDS;go_process=tRNA queuosine(34) biosynthetic process from salvaged queuosine or its precursors|0160254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017891284.1;locus_tag=IY40_RS18360;product=7-cyano-7-deazaguanine/7-aminomethyl-7-deazaguanine transporter;protein_id=WP_043142197.1;transl_table=11 NZ_JPQY01000028.1 RefSeq gene 8879 9313 . + . ID=gene-IY40_RS18365;Name=IY40_RS18365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS18365;old_locus_tag=IY40_18685 NZ_JPQY01000028.1 Protein Homology CDS 8879 9313 . + 0 ID=cds-WP_043142199.1;Parent=gene-IY40_RS18365;Dbxref=GenBank:WP_043142199.1;Name=WP_043142199.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015376278.1;locus_tag=IY40_RS18365;product=GNAT family N-acetyltransferase;protein_id=WP_043142199.1;transl_table=11 NZ_JPQY01000028.1 RefSeq gene 9394 9957 . + . ID=gene-IY40_RS18370;Name=IY40_RS18370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS18370;old_locus_tag=IY40_18690 NZ_JPQY01000028.1 Protein Homology CDS 9394 9957 . + 0 ID=cds-WP_025304887.1;Parent=gene-IY40_RS18370;Dbxref=GenBank:WP_025304887.1;Name=WP_025304887.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016929481.1;locus_tag=IY40_RS18370;product=DcrB family lipoprotein;protein_id=WP_025304887.1;transl_table=11 NZ_JPQY01000028.1 RefSeq gene 9993 11192 . - . ID=gene-IY40_RS18375;Name=glpC;gbkey=Gene;gene=glpC;gene_biotype=protein_coding;locus_tag=IY40_RS18375;old_locus_tag=IY40_18695 NZ_JPQY01000028.1 Protein Homology CDS 9993 11192 . - 0 ID=cds-WP_043142203.1;Parent=gene-IY40_RS18375;Dbxref=GenBank:WP_043142203.1;Name=WP_043142203.1;Ontology_term=GO:0006071,GO:0009061,GO:0004368,GO:0051536,GO:0009331,GO:0016020;gbkey=CDS;gene=glpC;go_component=glycerol-3-phosphate dehydrogenase (FAD) complex|0009331||IEA,membrane|0016020||IEA;go_function=glycerol-3-phosphate dehydrogenase (quinone) activity|0004368||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=glycerol metabolic process|0006071||IEA,anaerobic respiration|0009061||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004957439.1;locus_tag=IY40_RS18375;product=anaerobic glycerol-3-phosphate dehydrogenase subunit GlpC;protein_id=WP_043142203.1;transl_table=11 NZ_JPQY01000028.1 RefSeq gene 11189 12457 . - . ID=gene-IY40_RS18380;Name=glpB;gbkey=Gene;gene=glpB;gene_biotype=protein_coding;locus_tag=IY40_RS18380;old_locus_tag=IY40_18700 NZ_JPQY01000028.1 Protein Homology CDS 11189 12457 . - 0 ID=cds-WP_043142206.1;Parent=gene-IY40_RS18380;Dbxref=GenBank:WP_043142206.1;Name=WP_043142206.1;gbkey=CDS;gene=glpB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016929483.1;locus_tag=IY40_RS18380;product=glycerol-3-phosphate dehydrogenase subunit GlpB;protein_id=WP_043142206.1;transl_table=11 NZ_JPQY01000028.1 RefSeq gene 12447 14096 . - . ID=gene-IY40_RS18385;Name=glpA;gbkey=Gene;gene=glpA;gene_biotype=protein_coding;locus_tag=IY40_RS18385;old_locus_tag=IY40_18705 NZ_JPQY01000028.1 Protein Homology CDS 12447 14096 . - 0 ID=cds-WP_025304884.1;Parent=gene-IY40_RS18385;Dbxref=GenBank:WP_025304884.1;Name=WP_025304884.1;Ontology_term=GO:0006072,GO:0046174,GO:0004368,GO:0010181,GO:0050660,GO:0009331;gbkey=CDS;gene=glpA;go_component=glycerol-3-phosphate dehydrogenase (FAD) complex|0009331||IEA;go_function=glycerol-3-phosphate dehydrogenase (quinone) activity|0004368||IEA,FMN binding|0010181||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=glycerol-3-phosphate metabolic process|0006072||IEA,polyol catabolic process|0046174||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019452530.1;locus_tag=IY40_RS18385;product=anaerobic glycerol-3-phosphate dehydrogenase subunit A;protein_id=WP_025304884.1;transl_table=11 NZ_JPQY01000028.1 RefSeq gene 14461 15813 . + . ID=gene-IY40_RS18390;Name=glpT;gbkey=Gene;gene=glpT;gene_biotype=protein_coding;locus_tag=IY40_RS18390;old_locus_tag=IY40_18710 NZ_JPQY01000028.1 Protein Homology CDS 14461 15813 . + 0 ID=cds-WP_043142209.1;Parent=gene-IY40_RS18390;Dbxref=GenBank:WP_043142209.1;Name=WP_043142209.1;Ontology_term=GO:0015794,GO:0015169,GO:0016020;gbkey=CDS;gene=glpT;go_component=membrane|0016020||IEA;go_function=glycerol-3-phosphate transmembrane transporter activity|0015169||IEA;go_process=glycerol-3-phosphate transmembrane transport|0015794||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013811065.1;locus_tag=IY40_RS18390;product=glycerol-3-phosphate transporter;protein_id=WP_043142209.1;transl_table=11 NZ_JPQY01000028.1 RefSeq gene 15896 16975 . + . ID=gene-IY40_RS18395;Name=glpQ;gbkey=Gene;gene=glpQ;gene_biotype=protein_coding;locus_tag=IY40_RS18395;old_locus_tag=IY40_18715 NZ_JPQY01000028.1 Protein Homology CDS 15896 16975 . + 0 ID=cds-WP_015376272.1;Parent=gene-IY40_RS18395;Dbxref=GenBank:WP_015376272.1;Name=WP_015376272.1;Ontology_term=GO:0006629,GO:0008081;gbkey=CDS;gene=glpQ;go_function=phosphoric diester hydrolase activity|0008081||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004934292.1;locus_tag=IY40_RS18395;product=glycerophosphodiester phosphodiesterase;protein_id=WP_015376272.1;transl_table=11 NZ_JPQY01000028.1 RefSeq gene 17030 17827 . - . ID=gene-IY40_RS18400;Name=yigL;gbkey=Gene;gene=yigL;gene_biotype=protein_coding;locus_tag=IY40_RS18400;old_locus_tag=IY40_18720 NZ_JPQY01000028.1 Protein Homology CDS 17030 17827 . - 0 ID=cds-WP_025304881.1;Parent=gene-IY40_RS18400;Dbxref=GenBank:WP_025304881.1;Name=WP_025304881.1;gbkey=CDS;gene=yigL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004934290.1;locus_tag=IY40_RS18400;product=sugar/pyridoxal phosphate phosphatase YigL;protein_id=WP_025304881.1;transl_table=11 NZ_JPQY01000028.1 RefSeq gene 17832 18875 . - . ID=gene-IY40_RS18405;Name=pldB;gbkey=Gene;gene=pldB;gene_biotype=protein_coding;locus_tag=IY40_RS18405;old_locus_tag=IY40_18725 NZ_JPQY01000028.1 Protein Homology CDS 17832 18875 . - 0 ID=cds-WP_043142212.1;Parent=gene-IY40_RS18405;Dbxref=GenBank:WP_043142212.1;Name=WP_043142212.1;gbkey=CDS;gene=pldB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016929485.1;locus_tag=IY40_RS18405;product=lysophospholipase L2;protein_id=WP_043142212.1;transl_table=11 NZ_JPQY01000028.1 RefSeq gene 19023 19643 . + . ID=gene-IY40_RS18410;Name=rhtB;gbkey=Gene;gene=rhtB;gene_biotype=protein_coding;locus_tag=IY40_RS18410;old_locus_tag=IY40_18730 NZ_JPQY01000028.1 Protein Homology CDS 19023 19643 . + 0 ID=cds-WP_025304879.1;Parent=gene-IY40_RS18410;Dbxref=GenBank:WP_025304879.1;Name=WP_025304879.1;Ontology_term=GO:0006865,GO:0016020;gbkey=CDS;gene=rhtB;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017891277.1;locus_tag=IY40_RS18410;product=homoserine/homoserine lactone efflux protein;protein_id=WP_025304879.1;transl_table=11 NZ_JPQY01000028.1 RefSeq gene 19692 20312 . - . ID=gene-IY40_RS18415;Name=rhtC;gbkey=Gene;gene=rhtC;gene_biotype=protein_coding;locus_tag=IY40_RS18415;old_locus_tag=IY40_18735 NZ_JPQY01000028.1 Protein Homology CDS 19692 20312 . - 0 ID=cds-WP_043142215.1;Parent=gene-IY40_RS18415;Dbxref=GenBank:WP_043142215.1;Name=WP_043142215.1;Ontology_term=GO:0006865;gbkey=CDS;gene=rhtC;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004714274.1;locus_tag=IY40_RS18415;product=threonine export protein RhtC;protein_id=WP_043142215.1;transl_table=11 NZ_JPQY01000028.1 RefSeq gene 20325 22157 . - . ID=gene-IY40_RS18420;Name=recQ;gbkey=Gene;gene=recQ;gene_biotype=protein_coding;locus_tag=IY40_RS18420;old_locus_tag=IY40_18740 NZ_JPQY01000028.1 Protein Homology CDS 20325 22157 . - 0 ID=cds-WP_025304878.1;Parent=gene-IY40_RS18420;Dbxref=GenBank:WP_025304878.1;Name=WP_025304878.1;Ontology_term=GO:0006310,GO:0003678;gbkey=CDS;gene=recQ;go_function=DNA helicase activity|0003678||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019080187.1;locus_tag=IY40_RS18420;product=ATP-dependent DNA helicase RecQ;protein_id=WP_025304878.1;transl_table=11 NZ_JPQY01000028.1 RefSeq gene 22201 23079 . - . ID=gene-IY40_RS18425;Name=pldA;gbkey=Gene;gene=pldA;gene_biotype=protein_coding;locus_tag=IY40_RS18425;old_locus_tag=IY40_18745 NZ_JPQY01000028.1 Protein Homology CDS 22201 23079 . - 0 ID=cds-WP_025304877.1;Parent=gene-IY40_RS18425;Dbxref=GenBank:WP_025304877.1;Name=WP_025304877.1;Ontology_term=GO:0006629,GO:0004620;gbkey=CDS;gene=pldA;go_function=phospholipase activity|0004620||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004934270.1;locus_tag=IY40_RS18425;product=phospholipase A;protein_id=WP_025304877.1;transl_table=11 NZ_JPQY01000028.1 RefSeq gene 23283 23753 . + . ID=gene-IY40_RS18430;Name=IY40_RS18430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS18430;old_locus_tag=IY40_18750 NZ_JPQY01000028.1 Protein Homology CDS 23283 23753 . + 0 ID=cds-WP_016929489.1;Parent=gene-IY40_RS18430;Dbxref=GenBank:WP_016929489.1;Name=WP_016929489.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211482.1;locus_tag=IY40_RS18430;product=thioesterase family protein;protein_id=WP_016929489.1;transl_table=11 NZ_JPQY01000028.1 RefSeq gene 23820 24707 . + . ID=gene-IY40_RS18435;Name=rarD;gbkey=Gene;gene=rarD;gene_biotype=protein_coding;locus_tag=IY40_RS18435;old_locus_tag=IY40_18755 NZ_JPQY01000028.1 Protein Homology CDS 23820 24707 . + 0 ID=cds-WP_025304876.1;Parent=gene-IY40_RS18435;Dbxref=GenBank:WP_025304876.1;Name=WP_025304876.1;Ontology_term=GO:0016020;gbkey=CDS;gene=rarD;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019452537.1;locus_tag=IY40_RS18435;product=EamA family transporter RarD;protein_id=WP_025304876.1;transl_table=11 NZ_JPQY01000028.1 RefSeq gene 24724 25674 . - . ID=gene-IY40_RS18440;Name=corA;gbkey=Gene;gene=corA;gene_biotype=protein_coding;locus_tag=IY40_RS18440;old_locus_tag=IY40_18760 NZ_JPQY01000028.1 Protein Homology CDS 24724 25674 . - 0 ID=cds-WP_004934262.1;Parent=gene-IY40_RS18440;Dbxref=GenBank:WP_004934262.1;Name=WP_004934262.1;Ontology_term=GO:0006824,GO:0015693,GO:0015087,GO:0015095,GO:0016020;gbkey=CDS;gene=corA;go_component=membrane|0016020||IEA;go_function=cobalt ion transmembrane transporter activity|0015087||IEA,magnesium ion transmembrane transporter activity|0015095||IEA;go_process=cobalt ion transport|0006824||IEA,magnesium ion transport|0015693||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000947142.1;locus_tag=IY40_RS18440;product=magnesium/cobalt transporter CorA;protein_id=WP_004934262.1;transl_table=11 NZ_JPQY01000028.1 RefSeq gene 26119 26592 . + . ID=gene-IY40_RS18445;Name=IY40_RS18445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS18445;old_locus_tag=IY40_18770 NZ_JPQY01000028.1 Protein Homology CDS 26119 26592 . + 0 ID=cds-WP_025304875.1;Parent=gene-IY40_RS18445;Dbxref=GenBank:WP_025304875.1;Name=WP_025304875.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004950924.1;locus_tag=IY40_RS18445;product=WbuC family cupin fold metalloprotein;protein_id=WP_025304875.1;transl_table=11 NZ_JPQY01000028.1 RefSeq gene 26638 28800 . - . ID=gene-IY40_RS18450;Name=uvrD;gbkey=Gene;gene=uvrD;gene_biotype=protein_coding;locus_tag=IY40_RS18450;old_locus_tag=IY40_18775 NZ_JPQY01000028.1 Protein Homology CDS 26638 28800 . - 0 ID=cds-WP_025304874.1;Parent=gene-IY40_RS18450;Dbxref=GenBank:WP_025304874.1;Name=WP_025304874.1;Ontology_term=GO:0006260,GO:0006281,GO:0003678,GO:0005737;gbkey=CDS;gene=uvrD;go_component=cytoplasm|0005737||IEA;go_function=DNA helicase activity|0003678||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008455510.1;locus_tag=IY40_RS18450;product=DNA helicase II;protein_id=WP_025304874.1;transl_table=11 NZ_JPQY01000028.1 RefSeq gene 28879 29595 . - . ID=gene-IY40_RS18455;Name=yigB;gbkey=Gene;gene=yigB;gene_biotype=protein_coding;locus_tag=IY40_RS18455;old_locus_tag=IY40_18780 NZ_JPQY01000028.1 Protein Homology CDS 28879 29595 . - 0 ID=cds-WP_043142218.1;Parent=gene-IY40_RS18455;Dbxref=GenBank:WP_043142218.1;Name=WP_043142218.1;gbkey=CDS;gene=yigB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133304.1;locus_tag=IY40_RS18455;product=5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB;protein_id=WP_043142218.1;transl_table=11 NZ_JPQY01000028.1 RefSeq gene 29595 30506 . - . ID=gene-IY40_RS18460;Name=xerC;gbkey=Gene;gene=xerC;gene_biotype=protein_coding;locus_tag=IY40_RS18460;old_locus_tag=IY40_18785 NZ_JPQY01000028.1 Protein Homology CDS 29595 30506 . - 0 ID=cds-WP_043142222.1;Parent=gene-IY40_RS18460;Dbxref=GenBank:WP_043142222.1;Name=WP_043142222.1;Ontology_term=GO:0006310,GO:0007059,GO:0015074,GO:0051301,GO:0003677;gbkey=CDS;gene=xerC;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,chromosome segregation|0007059||IEA,DNA integration|0015074||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019452541.1;locus_tag=IY40_RS18460;product=tyrosine recombinase XerC;protein_id=WP_043142222.1;transl_table=11 NZ_JPQY01000028.1 RefSeq gene 30503 31216 . - . ID=gene-IY40_RS18465;Name=IY40_RS18465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS18465;old_locus_tag=IY40_18790 NZ_JPQY01000028.1 Protein Homology CDS 30503 31216 . - 0 ID=cds-WP_025304872.1;Parent=gene-IY40_RS18465;Dbxref=GenBank:WP_025304872.1;Name=WP_025304872.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004957385.1;locus_tag=IY40_RS18465;product=DUF484 domain-containing protein;protein_id=WP_025304872.1;transl_table=11 NZ_JPQY01000028.1 RefSeq gene 31213 32037 . - . ID=gene-IY40_RS18470;Name=dapF;gbkey=Gene;gene=dapF;gene_biotype=protein_coding;locus_tag=IY40_RS18470;old_locus_tag=IY40_18795 NZ_JPQY01000028.1 Protein Homology CDS 31213 32037 . - 0 ID=cds-WP_025304871.1;Parent=gene-IY40_RS18470;Dbxref=GenBank:WP_025304871.1;Name=WP_025304871.1;Ontology_term=GO:0009089,GO:0008837;gbkey=CDS;gene=dapF;go_function=diaminopimelate epimerase activity|0008837||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133314.1;locus_tag=IY40_RS18470;product=diaminopimelate epimerase;protein_id=WP_025304871.1;transl_table=11 NZ_JPQY01000028.1 RefSeq gene 32109 32315 . - . ID=gene-IY40_RS18475;Name=lptM;gbkey=Gene;gene=lptM;gene_biotype=protein_coding;gene_synonym=yifL;locus_tag=IY40_RS18475;old_locus_tag=IY40_18800 NZ_JPQY01000028.1 Protein Homology CDS 32109 32315 . - 0 ID=cds-WP_004934241.1;Parent=gene-IY40_RS18475;Dbxref=GenBank:WP_004934241.1;Name=WP_004934241.1;gbkey=CDS;gene=lptM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004934241.1;locus_tag=IY40_RS18475;product=LPS translocon maturation chaperone LptM;protein_id=WP_004934241.1;transl_table=11 NZ_JPQY01000028.1 RefSeq gene 32394 32714 . + . ID=gene-IY40_RS18480;Name=cyaY;gbkey=Gene;gene=cyaY;gene_biotype=protein_coding;locus_tag=IY40_RS18480;old_locus_tag=IY40_18805 NZ_JPQY01000028.1 Protein Homology CDS 32394 32714 . + 0 ID=cds-WP_004934237.1;Parent=gene-IY40_RS18480;Dbxref=GenBank:WP_004934237.1;Name=WP_004934237.1;Ontology_term=GO:0016226,GO:0005506;gbkey=CDS;gene=cyaY;go_function=iron ion binding|0005506||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012004651.1;locus_tag=IY40_RS18480;product=iron donor protein CyaY;protein_id=WP_004934237.1;transl_table=11 NZ_JPQY01000028.1 RefSeq gene 32751 35303 . - . ID=gene-IY40_RS18485;Name=IY40_RS18485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS18485;old_locus_tag=IY40_18810 NZ_JPQY01000028.1 Protein Homology CDS 32751 35303 . - 0 ID=cds-WP_019452546.1;Parent=gene-IY40_RS18485;Dbxref=GenBank:WP_019452546.1;Name=WP_019452546.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019084345.1;locus_tag=IY40_RS18485;product=class I adenylate cyclase;protein_id=WP_019452546.1;transl_table=11 NZ_JPQY01000028.1 RefSeq gene 35620 36561 . + . ID=gene-IY40_RS18490;Name=hemC;gbkey=Gene;gene=hemC;gene_biotype=protein_coding;locus_tag=IY40_RS18490;old_locus_tag=IY40_18815 NZ_JPQY01000028.1 Protein Homology CDS 35620 36561 . + 0 ID=cds-WP_041037210.1;Parent=gene-IY40_RS18490;Dbxref=GenBank:WP_041037210.1;Name=WP_041037210.1;Ontology_term=GO:0033014,GO:0004418;gbkey=CDS;gene=hemC;go_function=hydroxymethylbilane synthase activity|0004418||IEA;go_process=tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004957362.1;locus_tag=IY40_RS18490;product=hydroxymethylbilane synthase;protein_id=WP_041037210.1;transl_table=11 NZ_JPQY01000028.1 RefSeq gene 36558 37298 . + . ID=gene-IY40_RS18495;Name=hemD;gbkey=Gene;gene=hemD;gene_biotype=protein_coding;locus_tag=IY40_RS18495;old_locus_tag=IY40_18820 NZ_JPQY01000028.1 Protein Homology CDS 36558 37298 . + 0 ID=cds-WP_025304868.1;Parent=gene-IY40_RS18495;Dbxref=GenBank:WP_025304868.1;Name=WP_025304868.1;Ontology_term=GO:0006780,GO:0004852;gbkey=CDS;gene=hemD;go_function=uroporphyrinogen-III synthase activity|0004852||IEA;go_process=uroporphyrinogen III biosynthetic process|0006780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017891268.1;locus_tag=IY40_RS18495;product=uroporphyrinogen-III synthase;protein_id=WP_025304868.1;transl_table=11 NZ_JPQY01000028.1 RefSeq gene 37321 38445 . + . ID=gene-IY40_RS18500;Name=hemX;gbkey=Gene;gene=hemX;gene_biotype=protein_coding;locus_tag=IY40_RS18500;old_locus_tag=IY40_18825 NZ_JPQY01000028.1 Protein Homology CDS 37321 38445 . + 0 ID=cds-WP_016929498.1;Parent=gene-IY40_RS18500;Dbxref=GenBank:WP_016929498.1;Name=WP_016929498.1;gbkey=CDS;gene=hemX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006323020.1;locus_tag=IY40_RS18500;product=uroporphyrinogen-III C-methyltransferase;protein_id=WP_016929498.1;transl_table=11 NZ_JPQY01000028.1 RefSeq gene 38449 39645 . + . ID=gene-IY40_RS18505;Name=hemY;gbkey=Gene;gene=hemY;gene_biotype=protein_coding;locus_tag=IY40_RS18505;old_locus_tag=IY40_18830 NZ_JPQY01000028.1 Protein Homology CDS 38449 39645 . + 0 ID=cds-WP_004934228.1;Parent=gene-IY40_RS18505;Dbxref=GenBank:WP_004934228.1;Name=WP_004934228.1;Ontology_term=GO:0042168,GO:0005515,GO:0016020;gbkey=CDS;gene=hemY;go_component=membrane|0016020||IEA;go_function=protein binding|0005515||IEA;go_process=heme metabolic process|0042168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019452550.1;locus_tag=IY40_RS18505;product=protoheme IX biogenesis protein HemY;protein_id=WP_004934228.1;transl_table=11 NZ_JPQY01000028.1 RefSeq gene 40352 40480 . - . ID=gene-IY40_RS25430;Name=IY40_RS25430;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IY40_RS25430;old_locus_tag=IY40_19135 NZ_JPQY01000028.1 cmsearch ncRNA 40352 40480 . - . ID=rna-IY40_RS25430;Parent=gene-IY40_RS25430;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=IY40_RS25430;product=RtT sRNA NZ_JPQY01000028.1 cmsearch exon 40352 40480 . - . ID=exon-IY40_RS25430-1;Parent=rna-IY40_RS25430;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=IY40_RS25430;product=RtT sRNA NZ_JPQY01000028.1 RefSeq gene 40516 40592 . - . ID=gene-IY40_RS18510;Name=IY40_RS18510;gbkey=Gene;gene_biotype=tRNA;locus_tag=IY40_RS18510;old_locus_tag=IY40_18835 NZ_JPQY01000028.1 tRNAscan-SE tRNA 40516 40592 . - . ID=rna-IY40_RS18510;Parent=gene-IY40_RS18510;anticodon=(pos:complement(40556..40558));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=IY40_RS18510;product=tRNA-Pro NZ_JPQY01000028.1 tRNAscan-SE exon 40516 40592 . - . ID=exon-IY40_RS18510-1;Parent=rna-IY40_RS18510;anticodon=(pos:complement(40556..40558));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=IY40_RS18510;product=tRNA-Pro NZ_JPQY01000028.1 RefSeq gene 40667 40753 . - . ID=gene-IY40_RS18515;Name=IY40_RS18515;gbkey=Gene;gene_biotype=tRNA;locus_tag=IY40_RS18515;old_locus_tag=IY40_18840 NZ_JPQY01000028.1 tRNAscan-SE tRNA 40667 40753 . - . ID=rna-IY40_RS18515;Parent=gene-IY40_RS18515;anticodon=(pos:complement(40717..40719));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=IY40_RS18515;product=tRNA-Leu NZ_JPQY01000028.1 tRNAscan-SE exon 40667 40753 . - . ID=exon-IY40_RS18515-1;Parent=rna-IY40_RS18515;anticodon=(pos:complement(40717..40719));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=IY40_RS18515;product=tRNA-Leu NZ_JPQY01000028.1 RefSeq gene 40795 40870 . - . ID=gene-IY40_RS18520;Name=IY40_RS18520;gbkey=Gene;gene_biotype=tRNA;locus_tag=IY40_RS18520;old_locus_tag=IY40_18845 NZ_JPQY01000028.1 tRNAscan-SE tRNA 40795 40870 . - . ID=rna-IY40_RS18520;Parent=gene-IY40_RS18520;anticodon=(pos:complement(40835..40837));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=IY40_RS18520;product=tRNA-His NZ_JPQY01000028.1 tRNAscan-SE exon 40795 40870 . - . ID=exon-IY40_RS18520-1;Parent=rna-IY40_RS18520;anticodon=(pos:complement(40835..40837));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=IY40_RS18520;product=tRNA-His NZ_JPQY01000028.1 RefSeq gene 40934 41010 . - . ID=gene-IY40_RS18525;Name=IY40_RS18525;gbkey=Gene;gene_biotype=tRNA;locus_tag=IY40_RS18525;old_locus_tag=IY40_18850 NZ_JPQY01000028.1 tRNAscan-SE tRNA 40934 41010 . - . ID=rna-IY40_RS18525;Parent=gene-IY40_RS18525;anticodon=(pos:complement(40974..40976));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=IY40_RS18525;product=tRNA-Arg NZ_JPQY01000028.1 tRNAscan-SE exon 40934 41010 . - . ID=exon-IY40_RS18525-1;Parent=rna-IY40_RS18525;anticodon=(pos:complement(40974..40976));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=IY40_RS18525;product=tRNA-Arg NZ_JPQY01000028.1 RefSeq gene 41146 42549 . - . ID=gene-IY40_RS18530;Name=thrP;gbkey=Gene;gene=thrP;gene_biotype=protein_coding;gene_synonym=yifK;locus_tag=IY40_RS18530;old_locus_tag=IY40_18855 NZ_JPQY01000028.1 Protein Homology CDS 41146 42549 . - 0 ID=cds-WP_025304867.1;Parent=gene-IY40_RS18530;Dbxref=GenBank:WP_025304867.1;Name=WP_025304867.1;Ontology_term=GO:0015194,GO:0015195;gbkey=CDS;gene=thrP;go_function=L-serine transmembrane transporter activity|0015194||IEA,L-threonine transmembrane transporter activity|0015195||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004950898.1;locus_tag=IY40_RS18530;product=bifunctional threonine/serine APC transporter ThrP;protein_id=WP_025304867.1;transl_table=11 NZ_JPQY01000028.1 RefSeq gene 42916 43656 . - . ID=gene-IY40_RS18535;Name=wecG;gbkey=Gene;gene=wecG;gene_biotype=protein_coding;locus_tag=IY40_RS18535;old_locus_tag=IY40_18860 NZ_JPQY01000028.1 Protein Homology CDS 42916 43656 . - 0 ID=cds-WP_025304866.1;Parent=gene-IY40_RS18535;Dbxref=GenBank:WP_025304866.1;Name=WP_025304866.1;Ontology_term=GO:0047241;gbkey=CDS;gene=wecG;go_function=lipopolysaccharide N-acetylmannosaminouronosyltransferase activity|0047241||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012004643.1;locus_tag=IY40_RS18535;product=lipopolysaccharide N-acetylmannosaminouronosyltransferase;protein_id=WP_025304866.1;transl_table=11 NZ_JPQY01000028.1 RefSeq gene 43671 45038 . - . ID=gene-IY40_RS18540;Name=wzyE;gbkey=Gene;gene=wzyE;gene_biotype=protein_coding;locus_tag=IY40_RS18540;old_locus_tag=IY40_18865 NZ_JPQY01000028.1 Protein Homology CDS 43671 45038 . - 0 ID=cds-WP_043142238.1;Parent=gene-IY40_RS18540;Dbxref=GenBank:WP_043142238.1;Name=WP_043142238.1;Ontology_term=GO:0009246,GO:0016020;gbkey=CDS;gene=wzyE;go_component=membrane|0016020||IEA;go_process=enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012004642.1;locus_tag=IY40_RS18540;product=ECA oligosaccharide polymerase;protein_id=WP_043142238.1;transl_table=11 NZ_JPQY01000028.1 RefSeq gene 45035 46120 . - . ID=gene-IY40_RS18545;Name=IY40_RS18545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS18545;old_locus_tag=IY40_18870 NZ_JPQY01000028.1 Protein Homology CDS 45035 46120 . - 0 ID=cds-WP_025304864.1;Parent=gene-IY40_RS18545;Dbxref=GenBank:WP_025304864.1;Name=WP_025304864.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020453666.1;locus_tag=IY40_RS18545;product=TDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase;protein_id=WP_025304864.1;transl_table=11 NZ_JPQY01000028.1 RefSeq gene 46117 47367 . - . ID=gene-IY40_RS18550;Name=wzxE;gbkey=Gene;gene=wzxE;gene_biotype=protein_coding;locus_tag=IY40_RS18550;old_locus_tag=IY40_18875 NZ_JPQY01000028.1 Protein Homology CDS 46117 47367 . - 0 ID=cds-WP_043142241.1;Parent=gene-IY40_RS18550;Dbxref=GenBank:WP_043142241.1;Name=WP_043142241.1;Ontology_term=GO:0009246,GO:0016020;gbkey=CDS;gene=wzxE;go_component=membrane|0016020||IEA;go_process=enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017891262.1;locus_tag=IY40_RS18550;product=lipid III flippase WzxE;protein_id=WP_043142241.1;transl_table=11 NZ_JPQY01000028.1 RefSeq gene 47369 48499 . - . ID=gene-IY40_RS18555;Name=rffA;gbkey=Gene;gene=rffA;gene_biotype=protein_coding;gene_synonym=fcnA,wecE;locus_tag=IY40_RS18555;old_locus_tag=IY40_18880 NZ_JPQY01000028.1 Protein Homology CDS 47369 48499 . - 0 ID=cds-WP_033639019.1;Parent=gene-IY40_RS18555;Dbxref=GenBank:WP_033639019.1;Name=WP_033639019.1;Ontology_term=GO:0009246,GO:0019180;gbkey=CDS;gene=rffA;go_function=dTDP-4-amino-4%2C6-dideoxygalactose transaminase activity|0019180||IEA;go_process=enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312751.1;locus_tag=IY40_RS18555;product=dTDP-4-amino-4%2C6-dideoxygalactose transaminase;protein_id=WP_033639019.1;transl_table=11 NZ_JPQY01000028.1 RefSeq gene 48486 49217 . - . ID=gene-IY40_RS18560;Name=rffC;gbkey=Gene;gene=rffC;gene_biotype=protein_coding;gene_synonym=wecD;locus_tag=IY40_RS18560;old_locus_tag=IY40_18885 NZ_JPQY01000028.1 Protein Homology CDS 48486 49217 . - 0 ID=cds-WP_043142245.1;Parent=gene-IY40_RS18560;Dbxref=GenBank:WP_043142245.1;Name=WP_043142245.1;Ontology_term=GO:0008080;gbkey=CDS;gene=rffC;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013811039.1;locus_tag=IY40_RS18560;product=dTDP-4-amino-4%2C6-dideoxy-D-galactose acyltransferase;protein_id=WP_043142245.1;transl_table=11 NZ_JPQY01000028.1 RefSeq gene 49195 50076 . - . ID=gene-IY40_RS18565;Name=rfbA;gbkey=Gene;gene=rfbA;gene_biotype=protein_coding;locus_tag=IY40_RS18565;old_locus_tag=IY40_18890 NZ_JPQY01000028.1 Protein Homology CDS 49195 50076 . - 0 ID=cds-WP_043142249.1;Parent=gene-IY40_RS18565;Dbxref=GenBank:WP_043142249.1;Name=WP_043142249.1;Ontology_term=GO:0000271,GO:0019305,GO:0008879;gbkey=CDS;gene=rfbA;go_function=glucose-1-phosphate thymidylyltransferase activity|0008879||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA,dTDP-rhamnose biosynthetic process|0019305||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418236.1;locus_tag=IY40_RS18565;product=glucose-1-phosphate thymidylyltransferase RfbA;protein_id=WP_043142249.1;transl_table=11 NZ_JPQY01000028.1 RefSeq gene 50125 51198 . - . ID=gene-IY40_RS18570;Name=rffG;gbkey=Gene;gene=rffG;gene_biotype=protein_coding;locus_tag=IY40_RS18570;old_locus_tag=IY40_18895 NZ_JPQY01000028.1 Protein Homology CDS 50125 51198 . - 0 ID=cds-WP_187181939.1;Parent=gene-IY40_RS18570;Dbxref=GenBank:WP_187181939.1;Name=WP_187181939.1;Ontology_term=GO:0009225,GO:0008460;gbkey=CDS;gene=rffG;go_function=dTDP-glucose 4%2C6-dehydratase activity|0008460||IEA;go_process=nucleotide-sugar metabolic process|0009225||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004950882.1;locus_tag=IY40_RS18570;product=dTDP-glucose 4%2C6-dehydratase;protein_id=WP_187181939.1;transl_table=11 NZ_JPQY01000028.1 RefSeq gene 51189 52451 . - . ID=gene-IY40_RS18575;Name=wecC;gbkey=Gene;gene=wecC;gene_biotype=protein_coding;locus_tag=IY40_RS18575;old_locus_tag=IY40_18900 NZ_JPQY01000028.1 Protein Homology CDS 51189 52451 . - 0 ID=cds-WP_043142251.1;Parent=gene-IY40_RS18575;Dbxref=GenBank:WP_043142251.1;Name=WP_043142251.1;Ontology_term=GO:0009246,GO:0051287,GO:0089714;gbkey=CDS;gene=wecC;go_function=NAD binding|0051287||IEA,UDP-N-acetyl-D-mannosamine dehydrogenase activity|0089714||IEA;go_process=enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462811.1;locus_tag=IY40_RS18575;product=UDP-N-acetyl-D-mannosamine dehydrogenase;protein_id=WP_043142251.1;transl_table=11 NZ_JPQY01000028.1 RefSeq gene 52448 53578 . - . ID=gene-IY40_RS18580;Name=wecB;gbkey=Gene;gene=wecB;gene_biotype=protein_coding;locus_tag=IY40_RS18580;old_locus_tag=IY40_18905 NZ_JPQY01000028.1 Protein Homology CDS 52448 53578 . - 0 ID=cds-WP_043142254.1;Parent=gene-IY40_RS18580;Dbxref=GenBank:WP_043142254.1;Name=WP_043142254.1;Ontology_term=GO:0008761;gbkey=CDS;gene=wecB;go_function=UDP-N-acetylglucosamine 2-epimerase activity|0008761||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211986.1;locus_tag=IY40_RS18580;product=non-hydrolyzing UDP-N-acetylglucosamine 2-epimerase;protein_id=WP_043142254.1;transl_table=11 NZ_JPQY01000028.1 RefSeq gene 53665 54717 . - . ID=gene-IY40_RS18585;Name=wzzE;gbkey=Gene;gene=wzzE;gene_biotype=protein_coding;locus_tag=IY40_RS18585;old_locus_tag=IY40_18910 NZ_JPQY01000028.1 Protein Homology CDS 53665 54717 . - 0 ID=cds-WP_043142257.1;Parent=gene-IY40_RS18585;Dbxref=GenBank:WP_043142257.1;Name=WP_043142257.1;Ontology_term=GO:0009103,GO:0009246,GO:0016020;gbkey=CDS;gene=wzzE;go_component=membrane|0016020||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA,enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004950878.1;locus_tag=IY40_RS18585;product=ECA polysaccharide chain length modulation protein;protein_id=WP_043142257.1;transl_table=11 NZ_JPQY01000028.1 RefSeq gene 54745 55842 . - . ID=gene-IY40_RS18590;Name=wecA;gbkey=Gene;gene=wecA;gene_biotype=protein_coding;locus_tag=IY40_RS18590;old_locus_tag=IY40_18915 NZ_JPQY01000028.1 Protein Homology CDS 54745 55842 . - 0 ID=cds-WP_025304855.1;Parent=gene-IY40_RS18590;Dbxref=GenBank:WP_025304855.1;Name=WP_025304855.1;Ontology_term=GO:0009103,GO:0009246,GO:0000287,GO:0016780,GO:0030145,GO:0036380,GO:0009276,GO:0016020;gbkey=CDS;gene=wecA;go_component=Gram-negative-bacterium-type cell wall|0009276||IEA,membrane|0016020||IEA;go_function=magnesium ion binding|0000287||IEA,phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA,manganese ion binding|0030145||IEA,UDP-N-acetylglucosamine-undecaprenyl-phosphate N-acetylglucosaminephosphotransferase activity|0036380||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA,enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004934192.1;locus_tag=IY40_RS18590;product=UDP-N-acetylglucosamine--undecaprenyl-phosphate N-acetylglucosaminephosphotransferase;protein_id=WP_025304855.1;transl_table=11 NZ_JPQY01000028.1 RefSeq gene 56139 57398 . - . ID=gene-IY40_RS18595;Name=rho;gbkey=Gene;gene=rho;gene_biotype=protein_coding;locus_tag=IY40_RS18595;old_locus_tag=IY40_18920 NZ_JPQY01000028.1 Protein Homology CDS 56139 57398 . - 0 ID=cds-WP_004934188.1;Parent=gene-IY40_RS18595;Dbxref=GenBank:WP_004934188.1;Name=WP_004934188.1;Ontology_term=GO:0006353,GO:0003723,GO:0005524,GO:0008186;gbkey=CDS;gene=rho;go_function=RNA binding|0003723||IEA,ATP binding|0005524||IEA,ATP-dependent activity%2C acting on RNA|0008186||IEA;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017492510.1;locus_tag=IY40_RS18595;product=transcription termination factor Rho;protein_id=WP_004934188.1;transl_table=11 NZ_JPQY01000028.1 RefSeq gene 57799 58125 . - . ID=gene-IY40_RS18600;Name=trxA;gbkey=Gene;gene=trxA;gene_biotype=protein_coding;locus_tag=IY40_RS18600;old_locus_tag=IY40_18925 NZ_JPQY01000028.1 Protein Homology CDS 57799 58125 . - 0 ID=cds-WP_025304854.1;Parent=gene-IY40_RS18600;Dbxref=GenBank:WP_025304854.1;Name=WP_025304854.1;Ontology_term=GO:0045454,GO:0015035;gbkey=CDS;gene=trxA;go_function=protein-disulfide reductase activity|0015035||IEA;go_process=cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017492509.1;locus_tag=IY40_RS18600;product=thioredoxin TrxA;protein_id=WP_025304854.1;transl_table=11 NZ_JPQY01000028.1 RefSeq gene 58257 59543 . + . ID=gene-IY40_RS18605;Name=rhlB;gbkey=Gene;gene=rhlB;gene_biotype=protein_coding;locus_tag=IY40_RS18605;old_locus_tag=IY40_18930 NZ_JPQY01000028.1 Protein Homology CDS 58257 59543 . + 0 ID=cds-WP_025304853.1;Parent=gene-IY40_RS18605;Dbxref=GenBank:WP_025304853.1;Name=WP_025304853.1;Ontology_term=GO:0003676,GO:0003724,GO:0005524;gbkey=CDS;gene=rhlB;go_function=nucleic acid binding|0003676||IEA,RNA helicase activity|0003724||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004393131.1;locus_tag=IY40_RS18605;product=ATP-dependent RNA helicase RhlB;protein_id=WP_025304853.1;transl_table=11 NZ_JPQY01000028.1 RefSeq gene 59549 61045 . + . ID=gene-IY40_RS18610;Name=ppx;gbkey=Gene;gene=ppx;gene_biotype=protein_coding;locus_tag=IY40_RS18610;old_locus_tag=IY40_18935 NZ_JPQY01000028.1 Protein Homology CDS 59549 61045 . + 0 ID=cds-WP_043142260.1;Parent=gene-IY40_RS18610;Dbxref=GenBank:WP_043142260.1;Name=WP_043142260.1;Ontology_term=GO:0006798,GO:0000287,GO:0004309;gbkey=CDS;gene=ppx;go_function=magnesium ion binding|0000287||IEA,exopolyphosphatase activity|0004309||IEA;go_process=polyphosphate catabolic process|0006798||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017891253.1;locus_tag=IY40_RS18610;product=exopolyphosphatase;protein_id=WP_043142260.1;transl_table=11 NZ_JPQY01000028.1 RefSeq gene 61078 63102 . - . ID=gene-IY40_RS18615;Name=rep;gbkey=Gene;gene=rep;gene_biotype=protein_coding;locus_tag=IY40_RS18615;old_locus_tag=IY40_18940 NZ_JPQY01000028.1 Protein Homology CDS 61078 63102 . - 0 ID=cds-WP_043142264.1;Parent=gene-IY40_RS18615;Dbxref=GenBank:WP_043142264.1;Name=WP_043142264.1;Ontology_term=GO:0006260,GO:0003678;gbkey=CDS;gene=rep;go_function=DNA helicase activity|0003678||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019452566.1;locus_tag=IY40_RS18615;product=DNA helicase Rep;protein_id=WP_043142264.1;transl_table=11 NZ_JPQY01000028.1 RefSeq gene 63212 63493 . + . ID=gene-IY40_RS18620;Name=ppiC;gbkey=Gene;gene=ppiC;gene_biotype=protein_coding;locus_tag=IY40_RS18620;old_locus_tag=IY40_18945 NZ_JPQY01000028.1 Protein Homology CDS 63212 63493 . + 0 ID=cds-WP_004934175.1;Parent=gene-IY40_RS18620;Dbxref=GenBank:WP_004934175.1;Name=WP_004934175.1;gbkey=CDS;gene=ppiC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004721654.1;locus_tag=IY40_RS18620;product=peptidylprolyl isomerase PpiC;protein_id=WP_004934175.1;transl_table=11 NZ_JPQY01000028.1 RefSeq gene 63520 65022 . - . ID=gene-IY40_RS18625;Name=IY40_RS18625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS18625;old_locus_tag=IY40_18950 NZ_JPQY01000028.1 Protein Homology CDS 63520 65022 . - 0 ID=cds-WP_025304850.1;Parent=gene-IY40_RS18625;Dbxref=GenBank:WP_025304850.1;Name=WP_025304850.1;Ontology_term=GO:0008237,GO:0046872;gbkey=CDS;go_function=metallopeptidase activity|0008237||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209550.1;locus_tag=IY40_RS18625;product=M16 family metallopeptidase;protein_id=WP_025304850.1;transl_table=11 NZ_JPQY01000028.1 RefSeq gene 65283 66569 . - . ID=gene-IY40_RS18630;Name=IY40_RS18630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS18630;old_locus_tag=IY40_18955 NZ_JPQY01000028.1 Protein Homology CDS 65283 66569 . - 0 ID=cds-WP_016929514.1;Parent=gene-IY40_RS18630;Dbxref=GenBank:WP_016929514.1;Name=WP_016929514.1;Ontology_term=GO:0006835,GO:0015293;gbkey=CDS;go_function=symporter activity|0015293||IEA;go_process=dicarboxylic acid transport|0006835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012004625.1;locus_tag=IY40_RS18630;product=dicarboxylate/amino acid:cation symporter;protein_id=WP_016929514.1;transl_table=11 NZ_JPQY01000028.1 RefSeq gene 66843 68849 . - . ID=gene-IY40_RS18635;Name=hmsP;gbkey=Gene;gene=hmsP;gene_biotype=protein_coding;locus_tag=IY40_RS18635;old_locus_tag=IY40_18960 NZ_JPQY01000028.1 Protein Homology CDS 66843 68849 . - 0 ID=cds-WP_025304849.1;Parent=gene-IY40_RS18635;Dbxref=GenBank:WP_025304849.1;Name=WP_025304849.1;Ontology_term=GO:0007165;gbkey=CDS;gene=hmsP;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015376245.1;locus_tag=IY40_RS18635;product=biofilm formation regulator HmsP;protein_id=WP_025304849.1;transl_table=11 NZ_JPQY01000028.1 RefSeq gene 69078 72551 . - . ID=gene-IY40_RS18640;Name=bcsC;gbkey=Gene;gene=bcsC;gene_biotype=protein_coding;locus_tag=IY40_RS18640;old_locus_tag=IY40_18965 NZ_JPQY01000028.1 Protein Homology CDS 69078 72551 . - 0 ID=cds-WP_043142267.1;Parent=gene-IY40_RS18640;Dbxref=GenBank:WP_043142267.1;Name=WP_043142267.1;Ontology_term=GO:0030244,GO:0005515,GO:0019867;gbkey=CDS;gene=bcsC;go_component=outer membrane|0019867||IEA;go_function=protein binding|0005515||IEA;go_process=cellulose biosynthetic process|0030244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006322993.1;locus_tag=IY40_RS18640;product=cellulose synthase complex outer membrane protein BcsC;protein_id=WP_043142267.1;transl_table=11 NZ_JPQY01000028.1 RefSeq gene 72533 73645 . - . ID=gene-IY40_RS18645;Name=bcsZ;gbkey=Gene;gene=bcsZ;gene_biotype=protein_coding;locus_tag=IY40_RS18645;old_locus_tag=IY40_18970 NZ_JPQY01000028.1 Protein Homology CDS 72533 73645 . - 0 ID=cds-WP_043142331.1;Parent=gene-IY40_RS18645;Dbxref=GenBank:WP_043142331.1;Name=WP_043142331.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;gene=bcsZ;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005157347.1;locus_tag=IY40_RS18645;product=cellulose synthase complex periplasmic endoglucanase BcsZ;protein_id=WP_043142331.1;transl_table=11 NZ_JPQY01000028.1 RefSeq gene 73651 75957 . - . ID=gene-IY40_RS18650;Name=bcsB;gbkey=Gene;gene=bcsB;gene_biotype=protein_coding;locus_tag=IY40_RS18650;old_locus_tag=IY40_18975 NZ_JPQY01000028.1 Protein Homology CDS 73651 75957 . - 0 ID=cds-WP_043142270.1;Parent=gene-IY40_RS18650;Dbxref=GenBank:WP_043142270.1;Name=WP_043142270.1;gbkey=CDS;gene=bcsB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006322991.1;locus_tag=IY40_RS18650;product=cellulose biosynthesis cyclic di-GMP-binding regulatory protein BcsB;protein_id=WP_043142270.1;transl_table=11 NZ_JPQY01000028.1 RefSeq gene 76020 78623 . - . ID=gene-IY40_RS18655;Name=bcsA;gbkey=Gene;gene=bcsA;gene_biotype=protein_coding;locus_tag=IY40_RS18655;old_locus_tag=IY40_18980 NZ_JPQY01000028.1 Protein Homology CDS 76020 78623 . - 0 ID=cds-WP_043142273.1;Parent=gene-IY40_RS18655;Dbxref=GenBank:WP_043142273.1;Name=WP_043142273.1;Ontology_term=GO:0006011,GO:0030244,GO:0016760,GO:0035438,GO:0016020;gbkey=CDS;gene=bcsA;go_component=membrane|0016020||IEA;go_function=cellulose synthase (UDP-forming) activity|0016760||IEA,cyclic-di-GMP binding|0035438||IEA;go_process=UDP-alpha-D-glucose metabolic process|0006011||IEA,cellulose biosynthetic process|0030244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004934153.1;locus_tag=IY40_RS18655;product=UDP-forming cellulose synthase catalytic subunit;protein_id=WP_043142273.1;transl_table=11 NZ_JPQY01000028.1 RefSeq gene 78620 79360 . - . ID=gene-IY40_RS18660;Name=bcsQ;gbkey=Gene;gene=bcsQ;gene_biotype=protein_coding;locus_tag=IY40_RS18660;old_locus_tag=IY40_18985 NZ_JPQY01000028.1 Protein Homology CDS 78620 79360 . - 0 ID=cds-WP_025304844.1;Parent=gene-IY40_RS18660;Dbxref=GenBank:WP_025304844.1;Name=WP_025304844.1;Ontology_term=GO:0090540;gbkey=CDS;gene=bcsQ;go_process=bacterial cellulose biosynthetic process|0090540||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004934150.1;locus_tag=IY40_RS18660;product=cellulose biosynthesis protein BcsQ;protein_id=WP_025304844.1;transl_table=11 NZ_JPQY01000028.1 RefSeq gene 79364 79555 . - . ID=gene-IY40_RS18665;Name=bcsR;gbkey=Gene;gene=bcsR;gene_biotype=protein_coding;locus_tag=IY40_RS18665;old_locus_tag=IY40_18990 NZ_JPQY01000028.1 Protein Homology CDS 79364 79555 . - 0 ID=cds-WP_043142275.1;Parent=gene-IY40_RS18665;Dbxref=GenBank:WP_043142275.1;Name=WP_043142275.1;gbkey=CDS;gene=bcsR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004934148.1;locus_tag=IY40_RS18665;product=cellulose biosynthesis protein BcsR;protein_id=WP_043142275.1;transl_table=11 NZ_JPQY01000028.1 RefSeq gene 79745 81313 . + . ID=gene-IY40_RS18670;Name=bcsE;gbkey=Gene;gene=bcsE;gene_biotype=protein_coding;locus_tag=IY40_RS18670;old_locus_tag=IY40_18995 NZ_JPQY01000028.1 Protein Homology CDS 79745 81313 . + 0 ID=cds-WP_043142277.1;Parent=gene-IY40_RS18670;Dbxref=GenBank:WP_043142277.1;Name=WP_043142277.1;Ontology_term=GO:0035438;gbkey=CDS;gene=bcsE;go_function=cyclic-di-GMP binding|0035438||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015376239.1;locus_tag=IY40_RS18670;product=cellulose biosynthesis protein BcsE;protein_id=WP_043142277.1;transl_table=11 NZ_JPQY01000028.1 RefSeq gene 81300 81503 . + . ID=gene-IY40_RS18675;Name=bcsF;gbkey=Gene;gene=bcsF;gene_biotype=protein_coding;locus_tag=IY40_RS18675;old_locus_tag=IY40_19000 NZ_JPQY01000028.1 Protein Homology CDS 81300 81503 . + 0 ID=cds-WP_004934139.1;Parent=gene-IY40_RS18675;Dbxref=GenBank:WP_004934139.1;Name=WP_004934139.1;Ontology_term=GO:0052324;gbkey=CDS;gene=bcsF;go_process=plant-type cell wall cellulose biosynthetic process|0052324||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013811019.1;locus_tag=IY40_RS18675;product=cellulose biosynthesis protein BcsF;protein_id=WP_004934139.1;transl_table=11 NZ_JPQY01000028.1 RefSeq gene 81500 83155 . + . ID=gene-IY40_RS18680;Name=bcsG;gbkey=Gene;gene=bcsG;gene_biotype=protein_coding;locus_tag=IY40_RS18680;old_locus_tag=IY40_19005 NZ_JPQY01000028.1 Protein Homology CDS 81500 83155 . + 0 ID=cds-WP_043142279.1;Parent=gene-IY40_RS18680;Dbxref=GenBank:WP_043142279.1;Name=WP_043142279.1;Ontology_term=GO:0030244;gbkey=CDS;gene=bcsG;go_process=cellulose biosynthetic process|0030244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006322978.1;locus_tag=IY40_RS18680;product=cellulose biosynthesis protein BcsG;protein_id=WP_043142279.1;transl_table=11 NZ_JPQY01000028.1 RefSeq gene 83454 84443 . - . ID=gene-IY40_RS18685;Name=dppF;gbkey=Gene;gene=dppF;gene_biotype=protein_coding;locus_tag=IY40_RS18685;old_locus_tag=IY40_19010 NZ_JPQY01000028.1 Protein Homology CDS 83454 84443 . - 0 ID=cds-WP_015376237.1;Parent=gene-IY40_RS18685;Dbxref=GenBank:WP_015376237.1;Name=WP_015376237.1;Ontology_term=GO:0042938,GO:0071916,GO:0016020;gbkey=CDS;gene=dppF;go_component=membrane|0016020||IEA;go_function=dipeptide transmembrane transporter activity|0071916||IEA;go_process=dipeptide transport|0042938||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004950828.1;locus_tag=IY40_RS18685;product=dipeptide ABC transporter ATP-binding subunit DppF;protein_id=WP_015376237.1;transl_table=11 NZ_JPQY01000028.1 RefSeq gene 84440 85420 . - . ID=gene-IY40_RS18690;Name=dppD;gbkey=Gene;gene=dppD;gene_biotype=protein_coding;locus_tag=IY40_RS18690;old_locus_tag=IY40_19015 NZ_JPQY01000028.1 Protein Homology CDS 84440 85420 . - 0 ID=cds-WP_004934132.1;Parent=gene-IY40_RS18690;Dbxref=GenBank:WP_004934132.1;Name=WP_004934132.1;Ontology_term=GO:0015833,GO:0000166,GO:0005524;gbkey=CDS;gene=dppD;go_function=nucleotide binding|0000166||IEA,ATP binding|0005524||IEA;go_process=peptide transport|0015833||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209562.1;locus_tag=IY40_RS18690;product=dipeptide ABC transporter ATP-binding protein;protein_id=WP_004934132.1;transl_table=11 NZ_JPQY01000028.1 RefSeq gene 85436 86338 . - . ID=gene-IY40_RS18695;Name=dppC;gbkey=Gene;gene=dppC;gene_biotype=protein_coding;locus_tag=IY40_RS18695;old_locus_tag=IY40_19020 NZ_JPQY01000028.1 Protein Homology CDS 85436 86338 . - 0 ID=cds-WP_025304838.1;Parent=gene-IY40_RS18695;Dbxref=GenBank:WP_025304838.1;Name=WP_025304838.1;Ontology_term=GO:0055085;gbkey=CDS;gene=dppC;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229356.1;locus_tag=IY40_RS18695;product=dipeptide ABC transporter permease DppC;protein_id=WP_025304838.1;transl_table=11 NZ_JPQY01000028.1 RefSeq gene 86350 87369 . - . ID=gene-IY40_RS18700;Name=dppB;gbkey=Gene;gene=dppB;gene_biotype=protein_coding;locus_tag=IY40_RS18700;old_locus_tag=IY40_19025 NZ_JPQY01000028.1 Protein Homology CDS 86350 87369 . - 0 ID=cds-WP_038630050.1;Parent=gene-IY40_RS18700;Dbxref=GenBank:WP_038630050.1;Name=WP_038630050.1;gbkey=CDS;gene=dppB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133865.1;locus_tag=IY40_RS18700;product=dipeptide ABC transporter permease DppB;protein_id=WP_038630050.1;transl_table=11 NZ_JPQY01000028.1 RefSeq gene 87540 89147 . - . ID=gene-IY40_RS18705;Name=dppA;gbkey=Gene;gene=dppA;gene_biotype=protein_coding;locus_tag=IY40_RS18705;old_locus_tag=IY40_19035 NZ_JPQY01000028.1 Protein Homology CDS 87540 89147 . - 0 ID=cds-WP_025304836.1;Parent=gene-IY40_RS18705;Dbxref=GenBank:WP_025304836.1;Name=WP_025304836.1;Ontology_term=GO:0042938,GO:0071916,GO:0030288;gbkey=CDS;gene=dppA;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=dipeptide transmembrane transporter activity|0071916||IEA;go_process=dipeptide transport|0042938||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011817398.1;locus_tag=IY40_RS18705;product=dipeptide ABC transporter periplasmic-binding protein DppA;protein_id=WP_025304836.1;transl_table=11 NZ_JPQY01000028.1 RefSeq gene 89749 91440 . - . ID=gene-IY40_RS18710;Name=IY40_RS18710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS18710;old_locus_tag=IY40_19040 NZ_JPQY01000028.1 Protein Homology CDS 89749 91440 . - 0 ID=cds-WP_043142281.1;Parent=gene-IY40_RS18710;Dbxref=GenBank:WP_043142281.1;Name=WP_043142281.1;Ontology_term=GO:0005975;gbkey=CDS;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019452585.1;locus_tag=IY40_RS18710;product=glycosyl hydrolase family 18 protein;protein_id=WP_043142281.1;transl_table=11 NZ_JPQY01000028.1 RefSeq gene 91865 91993 . - . ID=gene-IY40_RS25435;Name=IY40_RS25435;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IY40_RS25435;old_locus_tag=IY40_19140 NZ_JPQY01000028.1 cmsearch ncRNA 91865 91993 . - . ID=rna-IY40_RS25435;Parent=gene-IY40_RS25435;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=IY40_RS25435;product=RtT sRNA NZ_JPQY01000028.1 cmsearch exon 91865 91993 . - . ID=exon-IY40_RS25435-1;Parent=rna-IY40_RS25435;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=IY40_RS25435;product=RtT sRNA NZ_JPQY01000028.1 RefSeq gene 92030 92106 . - . ID=gene-IY40_RS18715;Name=IY40_RS18715;gbkey=Gene;gene_biotype=tRNA;locus_tag=IY40_RS18715;old_locus_tag=IY40_19045 NZ_JPQY01000028.1 tRNAscan-SE tRNA 92030 92106 . - . ID=rna-IY40_RS18715;Parent=gene-IY40_RS18715;anticodon=(pos:complement(92070..92072));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=IY40_RS18715;product=tRNA-Pro NZ_JPQY01000028.1 tRNAscan-SE exon 92030 92106 . - . ID=exon-IY40_RS18715-1;Parent=rna-IY40_RS18715;anticodon=(pos:complement(92070..92072));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=IY40_RS18715;product=tRNA-Pro NZ_JPQY01000028.1 RefSeq gene 92227 93558 . - . ID=gene-IY40_RS18720;Name=uhpC;gbkey=Gene;gene=uhpC;gene_biotype=protein_coding;locus_tag=IY40_RS18720;old_locus_tag=IY40_19050 NZ_JPQY01000028.1 Protein Homology CDS 92227 93558 . - 0 ID=cds-WP_043142283.1;Parent=gene-IY40_RS18720;Dbxref=GenBank:WP_043142283.1;Name=WP_043142283.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=uhpC;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013811010.1;locus_tag=IY40_RS18720;product=MFS transporter;protein_id=WP_043142283.1;transl_table=11 NZ_JPQY01000028.1 RefSeq gene 93654 95198 . - . ID=gene-IY40_RS18725;Name=uhpB;gbkey=Gene;gene=uhpB;gene_biotype=protein_coding;locus_tag=IY40_RS18725;old_locus_tag=IY40_19055 NZ_JPQY01000028.1 Protein Homology CDS 93654 95198 . - 0 ID=cds-WP_043142285.1;Parent=gene-IY40_RS18725;Dbxref=GenBank:WP_043142285.1;Name=WP_043142285.1;Ontology_term=GO:0000160,GO:0000155;gbkey=CDS;gene=uhpB;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016929531.1;locus_tag=IY40_RS18725;product=signal transduction histidine-protein kinase/phosphatase UhpB;protein_id=WP_043142285.1;transl_table=11 NZ_JPQY01000028.1 RefSeq gene 95195 95785 . - . ID=gene-IY40_RS18730;Name=uhpA;gbkey=Gene;gene=uhpA;gene_biotype=protein_coding;locus_tag=IY40_RS18730;old_locus_tag=IY40_19060 NZ_JPQY01000028.1 Protein Homology CDS 95195 95785 . - 0 ID=cds-WP_033645065.1;Parent=gene-IY40_RS18730;Dbxref=GenBank:WP_033645065.1;Name=WP_033645065.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=uhpA;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012303350.1;locus_tag=IY40_RS18730;product=transcriptional regulator UhpA;protein_id=WP_033645065.1;transl_table=11 NZ_JPQY01000028.1 RefSeq gene 95909 97603 . - . ID=gene-IY40_RS18735;Name=eptB;gbkey=Gene;gene=eptB;gene_biotype=protein_coding;locus_tag=IY40_RS18735;old_locus_tag=IY40_19065 NZ_JPQY01000028.1 Protein Homology CDS 95909 97603 . - 0 ID=cds-WP_043142312.1;Parent=gene-IY40_RS18735;Dbxref=GenBank:WP_043142312.1;Name=WP_043142312.1;Ontology_term=GO:0008484;gbkey=CDS;gene=eptB;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013811008.1;locus_tag=IY40_RS18735;product=kdo(2)-lipid A phosphoethanolamine 7''-transferase;protein_id=WP_043142312.1;transl_table=11 NZ_JPQY01000028.1 RefSeq gene 97829 98254 . - . ID=gene-IY40_RS18740;Name=IY40_RS18740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS18740;old_locus_tag=IY40_19070 NZ_JPQY01000028.1 Protein Homology CDS 97829 98254 . - 0 ID=cds-WP_004934114.1;Parent=gene-IY40_RS18740;Dbxref=GenBank:WP_004934114.1;Name=WP_004934114.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005273713.1;locus_tag=IY40_RS18740;product=organic hydroperoxide resistance protein;protein_id=WP_004934114.1;transl_table=11 NZ_JPQY01000028.1 RefSeq gene 98415 98879 . - . ID=gene-IY40_RS18745;Name=IY40_RS18745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS18745;old_locus_tag=IY40_19075 NZ_JPQY01000028.1 Protein Homology CDS 98415 98879 . - 0 ID=cds-WP_025304830.1;Parent=gene-IY40_RS18745;Dbxref=GenBank:WP_025304830.1;Name=WP_025304830.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004950795.1;locus_tag=IY40_RS18745;product=MarR family winged helix-turn-helix transcriptional regulator;protein_id=WP_025304830.1;transl_table=11 NZ_JPQY01000028.1 RefSeq gene 98975 99574 . + . ID=gene-IY40_RS18750;Name=IY40_RS18750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS18750;old_locus_tag=IY40_19080 NZ_JPQY01000028.1 Protein Homology CDS 98975 99574 . + 0 ID=cds-WP_025304829.1;Parent=gene-IY40_RS18750;Dbxref=GenBank:WP_025304829.1;Name=WP_025304829.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013811006.1;locus_tag=IY40_RS18750;product=HD domain-containing protein;protein_id=WP_025304829.1;transl_table=11 NZ_JPQY01000028.1 RefSeq gene 99575 100945 . - . ID=gene-IY40_RS18755;Name=IY40_RS18755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS18755;old_locus_tag=IY40_19085 NZ_JPQY01000028.1 Protein Homology CDS 99575 100945 . - 0 ID=cds-WP_373408032.1;Parent=gene-IY40_RS18755;Dbxref=GenBank:WP_373408032.1;Name=WP_373408032.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019452592.1;locus_tag=IY40_RS18755;product=carbohydrate porin;protein_id=WP_373408032.1;transl_table=11 NZ_JPQY01000028.1 RefSeq gene 101097 102500 . - . ID=gene-IY40_RS18760;Name=IY40_RS18760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS18760;old_locus_tag=IY40_19090 NZ_JPQY01000028.1 Protein Homology CDS 101097 102500 . - 0 ID=cds-WP_025304827.1;Parent=gene-IY40_RS18760;Dbxref=GenBank:WP_025304827.1;Name=WP_025304827.1;Ontology_term=GO:0005975,GO:0016798;gbkey=CDS;go_function=hydrolase activity%2C acting on glycosyl bonds|0016798||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016929537.1;locus_tag=IY40_RS18760;product=glycoside hydrolase family 1 protein;protein_id=WP_025304827.1;transl_table=11 NZ_JPQY01000028.1 RefSeq gene 102515 104377 . - . ID=gene-IY40_RS18765;Name=bglF;gbkey=Gene;gene=bglF;gene_biotype=protein_coding;locus_tag=IY40_RS18765;old_locus_tag=IY40_19095 NZ_JPQY01000028.1 Protein Homology CDS 102515 104377 . - 0 ID=cds-WP_043142315.1;Parent=gene-IY40_RS18765;Dbxref=GenBank:WP_043142315.1;Name=WP_043142315.1;gbkey=CDS;gene=bglF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013811003.1;locus_tag=IY40_RS18765;product=PTS beta-glucoside transporter subunit IIABC;protein_id=WP_043142315.1;transl_table=11 NZ_JPQY01000028.1 RefSeq gene 104638 105396 . - . ID=gene-IY40_RS18770;Name=IY40_RS18770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS18770;old_locus_tag=IY40_19100 NZ_JPQY01000028.1 Protein Homology CDS 104638 105396 . - 0 ID=cds-WP_043142316.1;Parent=gene-IY40_RS18770;Dbxref=GenBank:WP_043142316.1;Name=WP_043142316.1;Ontology_term=GO:0016491,GO:0070403;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017891228.1;locus_tag=IY40_RS18770;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_043142316.1;transl_table=11 NZ_JPQY01000028.1 RefSeq gene 105511 106374 . + . ID=gene-IY40_RS18775;Name=IY40_RS18775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS18775;old_locus_tag=IY40_19105 NZ_JPQY01000028.1 Protein Homology CDS 105511 106374 . + 0 ID=cds-WP_043142318.1;Parent=gene-IY40_RS18775;Dbxref=GenBank:WP_043142318.1;Name=WP_043142318.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019452596.1;locus_tag=IY40_RS18775;product=LysR family transcriptional regulator;protein_id=WP_043142318.1;transl_table=11 NZ_JPQY01000028.1 RefSeq gene 106468 107217 . + . ID=gene-IY40_RS18780;Name=IY40_RS18780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS18780;old_locus_tag=IY40_19110 NZ_JPQY01000028.1 Protein Homology CDS 106468 107217 . + 0 ID=cds-WP_043142321.1;Parent=gene-IY40_RS18780;Dbxref=GenBank:WP_043142321.1;Name=WP_043142321.1;Ontology_term=GO:0016491,GO:0051287,GO:0070403;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD binding|0051287||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004934095.1;locus_tag=IY40_RS18780;product=NAD-dependent epimerase/dehydratase family protein;protein_id=WP_043142321.1;transl_table=11 NZ_JPQY01000028.1 RefSeq gene 107251 108417 . - . ID=gene-IY40_RS18785;Name=IY40_RS18785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS18785;old_locus_tag=IY40_19115 NZ_JPQY01000028.1 Protein Homology CDS 107251 108417 . - 0 ID=cds-WP_025304822.1;Parent=gene-IY40_RS18785;Dbxref=GenBank:WP_025304822.1;Name=WP_025304822.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416174.1;locus_tag=IY40_RS18785;product=MFS transporter;protein_id=WP_025304822.1;transl_table=11 NZ_JPQY01000028.1 RefSeq gene 108797 109897 . + . ID=gene-IY40_RS18790;Name=IY40_RS18790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS18790;old_locus_tag=IY40_19120 NZ_JPQY01000028.1 Protein Homology CDS 108797 109897 . + 0 ID=cds-WP_043142322.1;Parent=gene-IY40_RS18790;Dbxref=GenBank:WP_043142322.1;Name=WP_043142322.1;Ontology_term=GO:0010181,GO:0016491;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004934091.1;locus_tag=IY40_RS18790;product=alkene reductase;protein_id=WP_043142322.1;transl_table=11 NZ_JPQY01000028.1 RefSeq gene 109929 110672 . - . ID=gene-IY40_RS18795;Name=IY40_RS18795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS18795;old_locus_tag=IY40_19125 NZ_JPQY01000028.1 Protein Homology CDS 109929 110672 . - 0 ID=cds-WP_043142324.1;Parent=gene-IY40_RS18795;Dbxref=GenBank:WP_043142324.1;Name=WP_043142324.1;Ontology_term=GO:0000166,GO:0016779,GO:0046872;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,nucleotidyltransferase activity|0016779||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015376226.1;locus_tag=IY40_RS18795;product=nucleotidyltransferase domain-containing protein;protein_id=WP_043142324.1;transl_table=11 NZ_JPQY01000028.1 RefSeq gene 110674 111186 . - . ID=gene-IY40_RS18800;Name=IY40_RS18800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS18800;old_locus_tag=IY40_19130 NZ_JPQY01000028.1 Protein Homology CDS 110674 111186 . - 0 ID=cds-WP_043142326.1;Parent=gene-IY40_RS18800;Dbxref=GenBank:WP_043142326.1;Name=WP_043142326.1;Ontology_term=GO:0001561,GO:0102672,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=fatty acid alpha-dioxygenase activity|0102672||IEA;go_process=fatty acid alpha-oxidation|0001561||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019452600.1;locus_tag=IY40_RS18800;product=Mpo1 family 2-hydroxy fatty acid dioxygenase;protein_id=WP_043142326.1;transl_table=11 ##sequence-region NZ_JPQY01000029.1 1 38519 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=615 NZ_JPQY01000029.1 RefSeq region 1 38519 . + . ID=NZ_JPQY01000029.1:1..38519;Dbxref=taxon:615;collected-by=Mahloro H. Serepa%3B Vincent M. Gray;collection-date=2013-04-11;country=South Africa: North West Province;gbkey=Src;genome=genomic;identified-by=Mahloro H. Serepa%3B Vincent M. Gray;isolation-source=entomopathogenic nematode Oscheius sp. MCB living in soil;mol_type=genomic DNA;nat-host=Oscheius sp. MCB;strain=MCB NZ_JPQY01000029.1 RefSeq gene 183 298 . + . ID=gene-IY40_RS18815;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=IY40_RS18815;old_locus_tag=IY40_19145 NZ_JPQY01000029.1 cmsearch rRNA 183 298 . + . ID=rna-IY40_RS18815;Parent=gene-IY40_RS18815;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=IY40_RS18815;product=5S ribosomal RNA NZ_JPQY01000029.1 cmsearch exon 183 298 . + . ID=exon-IY40_RS18815-1;Parent=rna-IY40_RS18815;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=IY40_RS18815;product=5S ribosomal RNA NZ_JPQY01000029.1 RefSeq gene 666 2318 . - . ID=gene-IY40_RS18820;Name=actP;gbkey=Gene;gene=actP;gene_biotype=protein_coding;locus_tag=IY40_RS18820;old_locus_tag=IY40_19150 NZ_JPQY01000029.1 Protein Homology CDS 666 2318 . - 0 ID=cds-WP_025304954.1;Parent=gene-IY40_RS18820;Dbxref=GenBank:WP_025304954.1;Name=WP_025304954.1;Ontology_term=GO:0006814,GO:0015123,GO:0015370,GO:0031402,GO:0005886;gbkey=CDS;gene=actP;go_component=plasma membrane|0005886||IEA;go_function=acetate transmembrane transporter activity|0015123||IEA,solute:sodium symporter activity|0015370||IEA,sodium ion binding|0031402||IEA;go_process=sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004930048.1;locus_tag=IY40_RS18820;product=cation/acetate symporter ActP;protein_id=WP_025304954.1;transl_table=11 NZ_JPQY01000029.1 RefSeq gene 2315 2626 . - . ID=gene-IY40_RS18825;Name=IY40_RS18825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS18825;old_locus_tag=IY40_19155 NZ_JPQY01000029.1 Protein Homology CDS 2315 2626 . - 0 ID=cds-WP_043142344.1;Parent=gene-IY40_RS18825;Dbxref=GenBank:WP_043142344.1;Name=WP_043142344.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209030.1;locus_tag=IY40_RS18825;product=DUF485 domain-containing protein;protein_id=WP_043142344.1;transl_table=11 NZ_JPQY01000029.1 RefSeq gene 2719 4677 . - . ID=gene-IY40_RS18830;Name=acs;gbkey=Gene;gene=acs;gene_biotype=protein_coding;locus_tag=IY40_RS18830;old_locus_tag=IY40_19160 NZ_JPQY01000029.1 Protein Homology CDS 2719 4677 . - 0 ID=cds-WP_025304955.1;Parent=gene-IY40_RS18830;Dbxref=GenBank:WP_025304955.1;Name=WP_025304955.1;Ontology_term=GO:0019427,GO:0003987,GO:0016208;gbkey=CDS;gene=acs;go_function=acetate-CoA ligase activity|0003987||IEA,AMP binding|0016208||IEA;go_process=acetyl-CoA biosynthetic process from acetate|0019427||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012004764.1;locus_tag=IY40_RS18830;product=acetate--CoA ligase;protein_id=WP_025304955.1;transl_table=11 NZ_JPQY01000029.1 RefSeq gene 5579 6895 . + . ID=gene-IY40_RS18835;Name=gltP;gbkey=Gene;gene=gltP;gene_biotype=protein_coding;locus_tag=IY40_RS18835;old_locus_tag=IY40_19165 NZ_JPQY01000029.1 Protein Homology CDS 5579 6895 . + 0 ID=cds-WP_043142347.1;Parent=gene-IY40_RS18835;Dbxref=GenBank:WP_043142347.1;Name=WP_043142347.1;Ontology_term=GO:0006835,GO:0015293,GO:0016020;gbkey=CDS;gene=gltP;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA;go_process=dicarboxylic acid transport|0006835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015376334.1;locus_tag=IY40_RS18835;product=glutamate/aspartate:proton symporter GltP;protein_id=WP_043142347.1;transl_table=11 NZ_JPQY01000029.1 RefSeq gene 7169 8512 . + . ID=gene-IY40_RS18840;Name=IY40_RS18840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS18840;old_locus_tag=IY40_19170 NZ_JPQY01000029.1 Protein Homology CDS 7169 8512 . + 0 ID=cds-WP_043142350.1;Parent=gene-IY40_RS18840;Dbxref=GenBank:WP_043142350.1;Name=WP_043142350.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004930039.1;locus_tag=IY40_RS18840;product=condensation domain-containing protein;protein_id=WP_043142350.1;transl_table=11 NZ_JPQY01000029.1 RefSeq gene 8555 11650 . - . ID=gene-IY40_RS18845;Name=IY40_RS18845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS18845;old_locus_tag=IY40_19175 NZ_JPQY01000029.1 Protein Homology CDS 8555 11650 . - 0 ID=cds-WP_043142354.1;Parent=gene-IY40_RS18845;Dbxref=GenBank:WP_043142354.1;Name=WP_043142354.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015376336.1;locus_tag=IY40_RS18845;product=amino acid adenylation domain-containing protein;protein_id=WP_043142354.1;transl_table=11 NZ_JPQY01000029.1 RefSeq gene 11684 13294 . - . ID=gene-IY40_RS18850;Name=IY40_RS18850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS18850;old_locus_tag=IY40_19180 NZ_JPQY01000029.1 Protein Homology CDS 11684 13294 . - 0 ID=cds-WP_043142357.1;Parent=gene-IY40_RS18850;Dbxref=GenBank:WP_043142357.1;Name=WP_043142357.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019453426.1;locus_tag=IY40_RS18850;product=condensation domain-containing protein;protein_id=WP_043142357.1;transl_table=11 NZ_JPQY01000029.1 RefSeq gene 13830 15923 . + . ID=gene-IY40_RS18855;Name=IY40_RS18855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS18855;old_locus_tag=IY40_19185 NZ_JPQY01000029.1 Protein Homology CDS 13830 15923 . + 0 ID=cds-WP_043142360.1;Parent=gene-IY40_RS18855;Dbxref=GenBank:WP_043142360.1;Name=WP_043142360.1;Ontology_term=GO:0055085,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017891746.1;locus_tag=IY40_RS18855;product=TonB-dependent receptor;protein_id=WP_043142360.1;transl_table=11 NZ_JPQY01000029.1 RefSeq gene 16002 18911 . + . ID=gene-IY40_RS18860;Name=IY40_RS18860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS18860;old_locus_tag=IY40_19190 NZ_JPQY01000029.1 Protein Homology CDS 16002 18911 . + 0 ID=cds-WP_043142363.1;Parent=gene-IY40_RS18860;Dbxref=GenBank:WP_043142363.1;Name=WP_043142363.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004930030.1;locus_tag=IY40_RS18860;product=condensation domain-containing protein;protein_id=WP_043142363.1;transl_table=11 NZ_JPQY01000029.1 RefSeq gene 18959 20191 . + . ID=gene-IY40_RS18865;Name=IY40_RS18865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS18865;old_locus_tag=IY40_19195 NZ_JPQY01000029.1 Protein Homology CDS 18959 20191 . + 0 ID=cds-WP_043142366.1;Parent=gene-IY40_RS18865;Dbxref=GenBank:WP_043142366.1;Name=WP_043142366.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004930028.1;locus_tag=IY40_RS18865;product=YncE family protein;protein_id=WP_043142366.1;transl_table=11 NZ_JPQY01000029.1 RefSeq gene 20411 22687 . - . ID=gene-IY40_RS18870;Name=IY40_RS18870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS18870;old_locus_tag=IY40_19200 NZ_JPQY01000029.1 Protein Homology CDS 20411 22687 . - 0 ID=cds-WP_043142369.1;Parent=gene-IY40_RS18870;Dbxref=GenBank:WP_043142369.1;Name=WP_043142369.1;Ontology_term=GO:0015891,GO:0015343,GO:0038023,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=siderophore-iron transmembrane transporter activity|0015343||IEA,signaling receptor activity|0038023||IEA;go_process=siderophore transport|0015891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006327062.1;locus_tag=IY40_RS18870;product=TonB-dependent siderophore receptor;protein_id=WP_043142369.1;transl_table=11 NZ_JPQY01000029.1 RefSeq gene 22973 24346 . + . ID=gene-IY40_RS18875;Name=fes;gbkey=Gene;gene=fes;gene_biotype=protein_coding;locus_tag=IY40_RS18875 NZ_JPQY01000029.1 Protein Homology CDS 22973 24346 . + 0 ID=cds-WP_075201420.1;Parent=gene-IY40_RS18875;Dbxref=GenBank:WP_075201420.1;Name=WP_075201420.1;Ontology_term=GO:0005506,GO:0008849;gbkey=CDS;gene=fes;go_function=iron ion binding|0005506||IEA,enterochelin esterase activity|0008849||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004947639.1;locus_tag=IY40_RS18875;product=enterochelin esterase;protein_id=WP_075201420.1;transl_table=11 NZ_JPQY01000029.1 RefSeq gene 24321 24527 . + . ID=gene-IY40_RS18880;Name=IY40_RS18880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS18880;old_locus_tag=IY40_19210 NZ_JPQY01000029.1 Protein Homology CDS 24321 24527 . + 0 ID=cds-WP_025304965.1;Parent=gene-IY40_RS18880;Dbxref=GenBank:WP_025304965.1;Name=WP_025304965.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004930023.1;locus_tag=IY40_RS18880;product=MbtH family protein;protein_id=WP_025304965.1;transl_table=11 NZ_JPQY01000029.1 RefSeq gene 24560 28504 . + . ID=gene-IY40_RS18885;Name=IY40_RS18885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS18885;old_locus_tag=IY40_19215 NZ_JPQY01000029.1 Protein Homology CDS 24560 28504 . + 0 ID=cds-WP_043142373.1;Parent=gene-IY40_RS18885;Dbxref=GenBank:WP_043142373.1;Name=WP_043142373.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019453419.1;locus_tag=IY40_RS18885;product=enterobactin synthase subunit F;protein_id=WP_043142373.1;transl_table=11 NZ_JPQY01000029.1 RefSeq gene 28681 29949 . + . ID=gene-IY40_RS18890;Name=entS;gbkey=Gene;gene=entS;gene_biotype=protein_coding;locus_tag=IY40_RS18890;old_locus_tag=IY40_19220 NZ_JPQY01000029.1 Protein Homology CDS 28681 29949 . + 0 ID=cds-WP_043142377.1;Parent=gene-IY40_RS18890;Dbxref=GenBank:WP_043142377.1;Name=WP_043142377.1;Ontology_term=GO:0042930,GO:0042931;gbkey=CDS;gene=entS;go_function=enterobactin transmembrane transporter activity|0042931||IEA;go_process=enterobactin transport|0042930||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015376345.1;locus_tag=IY40_RS18890;product=enterobactin transporter EntS;protein_id=WP_043142377.1;transl_table=11 NZ_JPQY01000029.1 RefSeq gene 30161 31366 . + . ID=gene-IY40_RS18895;Name=IY40_RS18895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS18895;old_locus_tag=IY40_19225 NZ_JPQY01000029.1 Protein Homology CDS 30161 31366 . + 0 ID=cds-WP_043142379.1;Parent=gene-IY40_RS18895;Dbxref=GenBank:WP_043142379.1;Name=WP_043142379.1;Ontology_term=GO:0009234,GO:0008909,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=isochorismate synthase activity|0008909||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004930018.1;locus_tag=IY40_RS18895;product=isochorismate synthase;protein_id=WP_043142379.1;transl_table=11 NZ_JPQY01000029.1 RefSeq gene 31374 33002 . + . ID=gene-IY40_RS18900;Name=IY40_RS18900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS18900;old_locus_tag=IY40_19230 NZ_JPQY01000029.1 Protein Homology CDS 31374 33002 . + 0 ID=cds-WP_043142383.1;Parent=gene-IY40_RS18900;Dbxref=GenBank:WP_043142383.1;Name=WP_043142383.1;Ontology_term=GO:0019290,GO:0008668;gbkey=CDS;go_function=2%2C3-dihydroxybenzoate--[aryl-carrier protein] ligase|0008668||IEA;go_process=siderophore biosynthetic process|0019290||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019453416.1;locus_tag=IY40_RS18900;product=(2%2C3-dihydroxybenzoyl)adenylate synthase;protein_id=WP_043142383.1;transl_table=11 NZ_JPQY01000029.1 RefSeq gene 33006 33866 . + . ID=gene-IY40_RS18905;Name=IY40_RS18905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS18905;old_locus_tag=IY40_19235 NZ_JPQY01000029.1 Protein Homology CDS 33006 33866 . + 0 ID=cds-WP_004930014.1;Parent=gene-IY40_RS18905;Dbxref=GenBank:WP_004930014.1;Name=WP_004930014.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015376348.1;locus_tag=IY40_RS18905;product=isochorismatase;protein_id=WP_004930014.1;transl_table=11 NZ_JPQY01000029.1 RefSeq gene 33928 34992 . + . ID=gene-IY40_RS18910;Name=yncE;gbkey=Gene;gene=yncE;gene_biotype=protein_coding;locus_tag=IY40_RS18910;old_locus_tag=IY40_19240 NZ_JPQY01000029.1 Protein Homology CDS 33928 34992 . + 0 ID=cds-WP_043142387.1;Parent=gene-IY40_RS18910;Dbxref=GenBank:WP_043142387.1;Name=WP_043142387.1;gbkey=CDS;gene=yncE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004930011.1;locus_tag=IY40_RS18910;product=7-bladed beta-propeller protein YncE;protein_id=WP_043142387.1;transl_table=11 NZ_JPQY01000029.1 RefSeq gene 35113 35733 . + . ID=gene-IY40_RS18915;Name=IY40_RS18915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS18915;old_locus_tag=IY40_19245 NZ_JPQY01000029.1 Protein Homology CDS 35113 35733 . + 0 ID=cds-WP_043142390.1;Parent=gene-IY40_RS18915;Dbxref=GenBank:WP_043142390.1;Name=WP_043142390.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016929397.1;locus_tag=IY40_RS18915;product=DUF2238 domain-containing protein;protein_id=WP_043142390.1;transl_table=11 NZ_JPQY01000029.1 RefSeq gene 36059 36793 . + . ID=gene-IY40_RS18920;Name=IY40_RS18920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS18920;old_locus_tag=IY40_19250 NZ_JPQY01000029.1 Protein Homology CDS 36059 36793 . + 0 ID=cds-WP_225735557.1;Parent=gene-IY40_RS18920;Dbxref=GenBank:WP_225735557.1;Name=WP_225735557.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004929616.1;locus_tag=IY40_RS18920;product=winged helix-turn-helix domain-containing protein;protein_id=WP_225735557.1;transl_table=11 NZ_JPQY01000029.1 RefSeq gene 36774 37265 . + . ID=gene-IY40_RS18925;Name=IY40_RS18925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS18925;old_locus_tag=IY40_19255 NZ_JPQY01000029.1 GeneMarkS-2+ CDS 36774 37265 . + 0 ID=cds-WP_043142396.1;Parent=gene-IY40_RS18925;Dbxref=GenBank:WP_043142396.1;Name=WP_043142396.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IY40_RS18925;product=hypothetical protein;protein_id=WP_043142396.1;transl_table=11 NZ_JPQY01000029.1 RefSeq gene 37350 38093 . - . ID=gene-IY40_RS18930;Name=IY40_RS18930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS18930;old_locus_tag=IY40_19260 NZ_JPQY01000029.1 Protein Homology CDS 37350 38093 . - 0 ID=cds-WP_043142398.1;Parent=gene-IY40_RS18930;Dbxref=GenBank:WP_043142398.1;Name=WP_043142398.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016929394.1;locus_tag=IY40_RS18930;product=winged helix-turn-helix domain-containing protein;protein_id=WP_043142398.1;transl_table=11 ##sequence-region NZ_JPQY01000030.1 1 44959 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=615 NZ_JPQY01000030.1 RefSeq region 1 44959 . + . ID=NZ_JPQY01000030.1:1..44959;Dbxref=taxon:615;collected-by=Mahloro H. Serepa%3B Vincent M. Gray;collection-date=2013-04-11;country=South Africa: North West Province;gbkey=Src;genome=genomic;identified-by=Mahloro H. Serepa%3B Vincent M. Gray;isolation-source=entomopathogenic nematode Oscheius sp. MCB living in soil;mol_type=genomic DNA;nat-host=Oscheius sp. MCB;strain=MCB NZ_JPQY01000030.1 RefSeq gene 1 704 . + . ID=gene-IY40_RS18935;Name=IY40_RS18935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS18935;old_locus_tag=IY40_19265;partial=true;start_range=.,1 NZ_JPQY01000030.1 Protein Homology CDS 1 704 . + 2 ID=cds-WP_043142407.1;Parent=gene-IY40_RS18935;Dbxref=GenBank:WP_043142407.1;Name=WP_043142407.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004938998.1;locus_tag=IY40_RS18935;partial=true;product=isoaspartyl peptidase/L-asparaginase;protein_id=WP_043142407.1;start_range=.,1;transl_table=11 NZ_JPQY01000030.1 RefSeq gene 724 2598 . + . ID=gene-IY40_RS18940;Name=IY40_RS18940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS18940;old_locus_tag=IY40_19270 NZ_JPQY01000030.1 Protein Homology CDS 724 2598 . + 0 ID=cds-WP_043142410.1;Parent=gene-IY40_RS18940;Dbxref=GenBank:WP_043142410.1;Name=WP_043142410.1;Ontology_term=GO:0015833,GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;go_process=peptide transport|0015833||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019454431.1;locus_tag=IY40_RS18940;product=dipeptide ABC transporter ATP-binding protein;protein_id=WP_043142410.1;transl_table=11 NZ_JPQY01000030.1 RefSeq gene 2622 4157 . + . ID=gene-IY40_RS18945;Name=gsiB;gbkey=Gene;gene=gsiB;gene_biotype=protein_coding;locus_tag=IY40_RS18945;old_locus_tag=IY40_19275 NZ_JPQY01000030.1 Protein Homology CDS 2622 4157 . + 0 ID=cds-WP_025302140.1;Parent=gene-IY40_RS18945;Dbxref=GenBank:WP_025302140.1;Name=WP_025302140.1;Ontology_term=GO:0034775,GO:0034634,GO:0043190;gbkey=CDS;gene=gsiB;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=glutathione transmembrane transporter activity|0034634||IEA;go_process=glutathione transmembrane transport|0034775||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006322169.1;locus_tag=IY40_RS18945;product=glutathione ABC transporter substrate-binding protein GsiB;protein_id=WP_025302140.1;transl_table=11 NZ_JPQY01000030.1 RefSeq gene 4210 5130 . + . ID=gene-IY40_RS18950;Name=gsiC;gbkey=Gene;gene=gsiC;gene_biotype=protein_coding;locus_tag=IY40_RS18950;old_locus_tag=IY40_19280 NZ_JPQY01000030.1 Protein Homology CDS 4210 5130 . + 0 ID=cds-WP_025302141.1;Parent=gene-IY40_RS18950;Dbxref=GenBank:WP_025302141.1;Name=WP_025302141.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=gsiC;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225998.1;locus_tag=IY40_RS18950;product=glutathione ABC transporter permease GsiC;protein_id=WP_025302141.1;transl_table=11 NZ_JPQY01000030.1 RefSeq gene 5140 6048 . + . ID=gene-IY40_RS18955;Name=gsiD;gbkey=Gene;gene=gsiD;gene_biotype=protein_coding;locus_tag=IY40_RS18955;old_locus_tag=IY40_19285 NZ_JPQY01000030.1 Protein Homology CDS 5140 6048 . + 0 ID=cds-WP_169540348.1;Parent=gene-IY40_RS18955;Dbxref=GenBank:WP_169540348.1;Name=WP_169540348.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=gsiD;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006322173.1;locus_tag=IY40_RS18955;product=glutathione ABC transporter permease GsiD;protein_id=WP_169540348.1;transl_table=11 NZ_JPQY01000030.1 RefSeq gene 6130 6372 . + . ID=gene-IY40_RS18960;Name=IY40_RS18960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS18960;old_locus_tag=IY40_19290 NZ_JPQY01000030.1 Protein Homology CDS 6130 6372 . + 0 ID=cds-WP_079449478.1;Parent=gene-IY40_RS18960;Dbxref=GenBank:WP_079449478.1;Name=WP_079449478.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006322175.1;locus_tag=IY40_RS18960;product=type II toxin-antitoxin system CcdA family antitoxin;protein_id=WP_079449478.1;transl_table=11 NZ_JPQY01000030.1 RefSeq gene 6375 6683 . + . ID=gene-IY40_RS18965;Name=IY40_RS18965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS18965;old_locus_tag=IY40_19295 NZ_JPQY01000030.1 Protein Homology CDS 6375 6683 . + 0 ID=cds-WP_043142412.1;Parent=gene-IY40_RS18965;Dbxref=GenBank:WP_043142412.1;Name=WP_043142412.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001199743.1;locus_tag=IY40_RS18965;product=CcdB family protein;protein_id=WP_043142412.1;transl_table=11 NZ_JPQY01000030.1 RefSeq gene 6718 7560 . - . ID=gene-IY40_RS18970;Name=fghA;gbkey=Gene;gene=fghA;gene_biotype=protein_coding;locus_tag=IY40_RS18970;old_locus_tag=IY40_19300 NZ_JPQY01000030.1 Protein Homology CDS 6718 7560 . - 0 ID=cds-WP_015377214.1;Parent=gene-IY40_RS18970;Dbxref=GenBank:WP_015377214.1;Name=WP_015377214.1;Ontology_term=GO:0046294,GO:0018738;gbkey=CDS;gene=fghA;go_function=S-formylglutathione hydrolase activity|0018738||IEA;go_process=formaldehyde catabolic process|0046294||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011816746.1;locus_tag=IY40_RS18970;product=S-formylglutathione hydrolase;protein_id=WP_015377214.1;transl_table=11 NZ_JPQY01000030.1 RefSeq gene 7575 8699 . - . ID=gene-IY40_RS18975;Name=IY40_RS18975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS18975;old_locus_tag=IY40_19305 NZ_JPQY01000030.1 Protein Homology CDS 7575 8699 . - 0 ID=cds-WP_043142415.1;Parent=gene-IY40_RS18975;Dbxref=GenBank:WP_043142415.1;Name=WP_043142415.1;Ontology_term=GO:0004022,GO:0008270,GO:0051903;gbkey=CDS;go_function=alcohol dehydrogenase (NAD+) activity|0004022||IEA,zinc ion binding|0008270||IEA,S-(hydroxymethyl)glutathione dehydrogenase [NAD(P)+] activity|0051903||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004938977.1;locus_tag=IY40_RS18975;product=S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase;protein_id=WP_043142415.1;transl_table=11 NZ_JPQY01000030.1 RefSeq gene 8730 9650 . - . ID=gene-IY40_RS18980;Name=ptrR;gbkey=Gene;gene=ptrR;gene_biotype=protein_coding;locus_tag=IY40_RS18980;old_locus_tag=IY40_19310 NZ_JPQY01000030.1 Protein Homology CDS 8730 9650 . - 0 ID=cds-WP_043142419.1;Parent=gene-IY40_RS18980;Dbxref=GenBank:WP_043142419.1;Name=WP_043142419.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=ptrR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017892162.1;locus_tag=IY40_RS18980;product=putrescine utilization regulator PtrR;protein_id=WP_043142419.1;transl_table=11 NZ_JPQY01000030.1 RefSeq gene 9756 10913 . + . ID=gene-IY40_RS18985;Name=IY40_RS18985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS18985;old_locus_tag=IY40_19315 NZ_JPQY01000030.1 Protein Homology CDS 9756 10913 . + 0 ID=cds-WP_043142422.1;Parent=gene-IY40_RS18985;Dbxref=GenBank:WP_043142422.1;Name=WP_043142422.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004938972.1;locus_tag=IY40_RS18985;product=YbfB/YjiJ family MFS transporter;protein_id=WP_043142422.1;transl_table=11 NZ_JPQY01000030.1 RefSeq gene 11157 11822 . + . ID=gene-IY40_RS18990;Name=folE;gbkey=Gene;gene=folE;gene_biotype=protein_coding;locus_tag=IY40_RS18990;old_locus_tag=IY40_19320 NZ_JPQY01000030.1 Protein Homology CDS 11157 11822 . + 0 ID=cds-WP_004938969.1;Parent=gene-IY40_RS18990;Dbxref=GenBank:WP_004938969.1;Name=WP_004938969.1;Ontology_term=GO:0046654,GO:0003934;gbkey=CDS;gene=folE;go_function=GTP cyclohydrolase I activity|0003934||IEA;go_process=tetrahydrofolate biosynthetic process|0046654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004387461.1;locus_tag=IY40_RS18990;product=GTP cyclohydrolase I FolE;protein_id=WP_004938969.1;transl_table=11 NZ_JPQY01000030.1 RefSeq gene 11902 13074 . + . ID=gene-IY40_RS18995;Name=yeiB;gbkey=Gene;gene=yeiB;gene_biotype=protein_coding;locus_tag=IY40_RS18995;old_locus_tag=IY40_19325 NZ_JPQY01000030.1 Protein Homology CDS 11902 13074 . + 0 ID=cds-WP_043142424.1;Parent=gene-IY40_RS18995;Dbxref=GenBank:WP_043142424.1;Name=WP_043142424.1;gbkey=CDS;gene=yeiB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004938966.1;locus_tag=IY40_RS18995;product=DUF418 domain-containing protein YeiB;protein_id=WP_043142424.1;transl_table=11 NZ_JPQY01000030.1 RefSeq gene 13201 14238 . + . ID=gene-IY40_RS19000;Name=galS;gbkey=Gene;gene=galS;gene_biotype=protein_coding;locus_tag=IY40_RS19000;old_locus_tag=IY40_19330 NZ_JPQY01000030.1 Protein Homology CDS 13201 14238 . + 0 ID=cds-WP_043142428.1;Parent=gene-IY40_RS19000;Dbxref=GenBank:WP_043142428.1;Name=WP_043142428.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=galS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013812177.1;locus_tag=IY40_RS19000;product=HTH-type transcriptional regulator GalS;protein_id=WP_043142428.1;transl_table=11 NZ_JPQY01000030.1 RefSeq gene 14503 15495 . + . ID=gene-IY40_RS19005;Name=mglB;gbkey=Gene;gene=mglB;gene_biotype=protein_coding;locus_tag=IY40_RS19005;old_locus_tag=IY40_19335 NZ_JPQY01000030.1 Protein Homology CDS 14503 15495 . + 0 ID=cds-WP_025302149.1;Parent=gene-IY40_RS19005;Dbxref=GenBank:WP_025302149.1;Name=WP_025302149.1;Ontology_term=GO:0030246;gbkey=CDS;gene=mglB;go_function=carbohydrate binding|0030246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005168257.1;locus_tag=IY40_RS19005;product=galactose/glucose ABC transporter substrate-binding protein MglB;protein_id=WP_025302149.1;transl_table=11 NZ_JPQY01000030.1 RefSeq gene 15595 17103 . + . ID=gene-IY40_RS19010;Name=mglA;gbkey=Gene;gene=mglA;gene_biotype=protein_coding;locus_tag=IY40_RS19010;old_locus_tag=IY40_19340 NZ_JPQY01000030.1 Protein Homology CDS 15595 17103 . + 0 ID=cds-WP_004938959.1;Parent=gene-IY40_RS19010;Dbxref=GenBank:WP_004938959.1;Name=WP_004938959.1;Ontology_term=GO:0008643,GO:0005524,GO:0043211,GO:0016020;gbkey=CDS;gene=mglA;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type carbohydrate transporter activity|0043211||IEA;go_process=carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020883197.1;locus_tag=IY40_RS19010;product=galactose/methyl galactoside ABC transporter ATP-binding protein MglA;protein_id=WP_004938959.1;transl_table=11 NZ_JPQY01000030.1 RefSeq gene 17115 18125 . + . ID=gene-IY40_RS19015;Name=mglC;gbkey=Gene;gene=mglC;gene_biotype=protein_coding;locus_tag=IY40_RS19015;old_locus_tag=IY40_19345 NZ_JPQY01000030.1 Protein Homology CDS 17115 18125 . + 0 ID=cds-WP_004938953.1;Parent=gene-IY40_RS19015;Dbxref=GenBank:WP_004938953.1;Name=WP_004938953.1;Ontology_term=GO:0008643,GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=mglC;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012229868.1;locus_tag=IY40_RS19015;product=galactose/methyl galactoside ABC transporter permease MglC;protein_id=WP_004938953.1;transl_table=11 NZ_JPQY01000030.1 RefSeq gene 18361 18753 . + . ID=gene-IY40_RS19020;Name=IY40_RS19020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS19020;old_locus_tag=IY40_19350 NZ_JPQY01000030.1 Protein Homology CDS 18361 18753 . + 0 ID=cds-WP_043142430.1;Parent=gene-IY40_RS19020;Dbxref=GenBank:WP_043142430.1;Name=WP_043142430.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025903.6;locus_tag=IY40_RS19020;product=tautomerase family protein;protein_id=WP_043142430.1;transl_table=11 NZ_JPQY01000030.1 RefSeq gene 18880 19623 . - . ID=gene-IY40_RS19025;Name=sanA;gbkey=Gene;gene=sanA;gene_biotype=protein_coding;locus_tag=IY40_RS19025;old_locus_tag=IY40_19355 NZ_JPQY01000030.1 Protein Homology CDS 18880 19623 . - 0 ID=cds-WP_004938948.1;Parent=gene-IY40_RS19025;Dbxref=GenBank:WP_004938948.1;Name=WP_004938948.1;gbkey=CDS;gene=sanA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006708326.1;locus_tag=IY40_RS19025;product=outer membrane permeability protein SanA;protein_id=WP_004938948.1;transl_table=11 NZ_JPQY01000030.1 RefSeq gene 19793 21490 . - . ID=gene-IY40_RS19030;Name=IY40_RS19030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS19030;old_locus_tag=IY40_19360 NZ_JPQY01000030.1 Protein Homology CDS 19793 21490 . - 0 ID=cds-WP_025302151.1;Parent=gene-IY40_RS19030;Dbxref=GenBank:WP_025302151.1;Name=WP_025302151.1;Ontology_term=GO:0004470,GO:0004471,GO:0046872,GO:0051287;gbkey=CDS;go_function=malic enzyme activity|0004470||IEA,malate dehydrogenase (decarboxylating) (NAD+) activity|0004471||IEA,metal ion binding|0046872||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015835025.1;locus_tag=IY40_RS19030;product=NAD-dependent malic enzyme;protein_id=WP_025302151.1;transl_table=11 NZ_JPQY01000030.1 RefSeq gene 21712 22596 . - . ID=gene-IY40_RS19035;Name=cdd;gbkey=Gene;gene=cdd;gene_biotype=protein_coding;locus_tag=IY40_RS19035;old_locus_tag=IY40_19365 NZ_JPQY01000030.1 Protein Homology CDS 21712 22596 . - 0 ID=cds-WP_043142432.1;Parent=gene-IY40_RS19035;Dbxref=GenBank:WP_043142432.1;Name=WP_043142432.1;Ontology_term=GO:0008655,GO:0004126,GO:0008270;gbkey=CDS;gene=cdd;go_function=cytidine deaminase activity|0004126||IEA,zinc ion binding|0008270||IEA;go_process=pyrimidine-containing compound salvage|0008655||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006324396.1;locus_tag=IY40_RS19035;product=cytidine deaminase;protein_id=WP_043142432.1;transl_table=11 NZ_JPQY01000030.1 RefSeq gene 22734 23429 . - . ID=gene-IY40_RS19040;Name=IY40_RS19040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS19040;old_locus_tag=IY40_19370 NZ_JPQY01000030.1 Protein Homology CDS 22734 23429 . - 0 ID=cds-WP_019454415.1;Parent=gene-IY40_RS19040;Dbxref=GenBank:WP_019454415.1;Name=WP_019454415.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192107.1;locus_tag=IY40_RS19040;product=CidB/LrgB family autolysis modulator;protein_id=WP_019454415.1;transl_table=11 NZ_JPQY01000030.1 RefSeq gene 23426 23833 . - . ID=gene-IY40_RS19045;Name=IY40_RS19045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS19045;old_locus_tag=IY40_19375 NZ_JPQY01000030.1 Protein Homology CDS 23426 23833 . - 0 ID=cds-WP_025302154.1;Parent=gene-IY40_RS19045;Dbxref=GenBank:WP_025302154.1;Name=WP_025302154.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019454414.1;locus_tag=IY40_RS19045;product=CidA/LrgA family protein;protein_id=WP_025302154.1;transl_table=11 NZ_JPQY01000030.1 RefSeq gene 23972 25183 . - . ID=gene-IY40_RS19050;Name=IY40_RS19050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS19050;old_locus_tag=IY40_19380 NZ_JPQY01000030.1 Protein Homology CDS 23972 25183 . - 0 ID=cds-WP_025302155.1;Parent=gene-IY40_RS19050;Dbxref=GenBank:WP_025302155.1;Name=WP_025302155.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016928444.1;locus_tag=IY40_RS19050;product=MFS transporter;protein_id=WP_025302155.1;transl_table=11 NZ_JPQY01000030.1 RefSeq gene 25315 26382 . - . ID=gene-IY40_RS19055;Name=IY40_RS19055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS19055;old_locus_tag=IY40_19385 NZ_JPQY01000030.1 Protein Homology CDS 25315 26382 . - 0 ID=cds-WP_043142433.1;Parent=gene-IY40_RS19055;Dbxref=GenBank:WP_043142433.1;Name=WP_043142433.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004938932.1;locus_tag=IY40_RS19055;product=sugar ABC transporter substrate-binding protein;protein_id=WP_043142433.1;transl_table=11 NZ_JPQY01000030.1 RefSeq gene 26604 28631 . - . ID=gene-IY40_RS19060;Name=metG;gbkey=Gene;gene=metG;gene_biotype=protein_coding;locus_tag=IY40_RS19060;old_locus_tag=IY40_19390 NZ_JPQY01000030.1 Protein Homology CDS 26604 28631 . - 0 ID=cds-WP_043142437.1;Parent=gene-IY40_RS19060;Dbxref=GenBank:WP_043142437.1;Name=WP_043142437.1;Ontology_term=GO:0006431,GO:0000166,GO:0004825,GO:0005524;gbkey=CDS;gene=metG;go_function=nucleotide binding|0000166||IEA,methionine-tRNA ligase activity|0004825||IEA,ATP binding|0005524||IEA;go_process=methionyl-tRNA aminoacylation|0006431||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310947.1;locus_tag=IY40_RS19060;product=methionine--tRNA ligase;protein_id=WP_043142437.1;transl_table=11 NZ_JPQY01000030.1 RefSeq gene 28791 29903 . + . ID=gene-IY40_RS19065;Name=apbC;gbkey=Gene;gene=apbC;gene_biotype=protein_coding;locus_tag=IY40_RS19065;old_locus_tag=IY40_19395 NZ_JPQY01000030.1 Protein Homology CDS 28791 29903 . + 0 ID=cds-WP_043142439.1;Parent=gene-IY40_RS19065;Dbxref=GenBank:WP_043142439.1;Name=WP_043142439.1;Ontology_term=GO:0016226,GO:0005524,GO:0016887,GO:0051536;gbkey=CDS;gene=apbC;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004388769.1;locus_tag=IY40_RS19065;product=iron-sulfur cluster carrier protein ApbC;protein_id=WP_043142439.1;transl_table=11 NZ_JPQY01000030.1 RefSeq gene 29948 30577 . - . ID=gene-IY40_RS19070;Name=IY40_RS19070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS19070;old_locus_tag=IY40_19400 NZ_JPQY01000030.1 Protein Homology CDS 29948 30577 . - 0 ID=cds-WP_025302159.1;Parent=gene-IY40_RS19070;Dbxref=GenBank:WP_025302159.1;Name=WP_025302159.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015377220.1;locus_tag=IY40_RS19070;product=phosphatase PAP2 family protein;protein_id=WP_025302159.1;transl_table=11 NZ_JPQY01000030.1 RefSeq gene 30808 31449 . + . ID=gene-IY40_RS19075;Name=udk;gbkey=Gene;gene=udk;gene_biotype=protein_coding;locus_tag=IY40_RS19075;old_locus_tag=IY40_19405 NZ_JPQY01000030.1 Protein Homology CDS 30808 31449 . + 0 ID=cds-WP_004938922.1;Parent=gene-IY40_RS19075;Dbxref=GenBank:WP_004938922.1;Name=WP_004938922.1;Ontology_term=GO:0004849;gbkey=CDS;gene=udk;go_function=uridine kinase activity|0004849||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211872.1;locus_tag=IY40_RS19075;product=uridine kinase;protein_id=WP_004938922.1;transl_table=11 NZ_JPQY01000030.1 RefSeq gene 31575 32156 . + . ID=gene-IY40_RS19080;Name=dcd;gbkey=Gene;gene=dcd;gene_biotype=protein_coding;locus_tag=IY40_RS19080;old_locus_tag=IY40_19410 NZ_JPQY01000030.1 Protein Homology CDS 31575 32156 . + 0 ID=cds-WP_019454407.1;Parent=gene-IY40_RS19080;Dbxref=GenBank:WP_019454407.1;Name=WP_019454407.1;Ontology_term=GO:0006229,GO:0008829;gbkey=CDS;gene=dcd;go_function=dCTP deaminase activity|0008829||IEA;go_process=dUTP biosynthetic process|0006229||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004942378.1;locus_tag=IY40_RS19080;product=dCTP deaminase;protein_id=WP_019454407.1;transl_table=11 NZ_JPQY01000030.1 RefSeq gene 32201 34033 . + . ID=gene-IY40_RS19085;Name=asmA;gbkey=Gene;gene=asmA;gene_biotype=protein_coding;locus_tag=IY40_RS19085;old_locus_tag=IY40_19415 NZ_JPQY01000030.1 Protein Homology CDS 32201 34033 . + 0 ID=cds-WP_043142441.1;Parent=gene-IY40_RS19085;Dbxref=GenBank:WP_043142441.1;Name=WP_043142441.1;gbkey=CDS;gene=asmA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211874.1;locus_tag=IY40_RS19085;product=outer membrane assembly protein AsmA;protein_id=WP_043142441.1;transl_table=11 NZ_JPQY01000030.1 RefSeq gene 34209 35561 . + . ID=gene-IY40_RS19090;Name=dcuC;gbkey=Gene;gene=dcuC;gene_biotype=protein_coding;locus_tag=IY40_RS19090;old_locus_tag=IY40_19420 NZ_JPQY01000030.1 Protein Homology CDS 34209 35561 . + 0 ID=cds-WP_043142443.1;Parent=gene-IY40_RS19090;Dbxref=GenBank:WP_043142443.1;Name=WP_043142443.1;Ontology_term=GO:0015740,GO:0015556;gbkey=CDS;gene=dcuC;go_function=C4-dicarboxylate transmembrane transporter activity|0015556||IEA;go_process=C4-dicarboxylate transport|0015740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004938910.1;locus_tag=IY40_RS19090;product=anaerobic C4-dicarboxylate transporter DcuC;protein_id=WP_043142443.1;transl_table=11 NZ_JPQY01000030.1 RefSeq gene 35593 37176 . - . ID=gene-IY40_RS19095;Name=IY40_RS19095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS19095;old_locus_tag=IY40_19425 NZ_JPQY01000030.1 Protein Homology CDS 35593 37176 . - 0 ID=cds-WP_043142445.1;Parent=gene-IY40_RS19095;Dbxref=GenBank:WP_043142445.1;Name=WP_043142445.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004388775.1;locus_tag=IY40_RS19095;product=TerC family protein;protein_id=WP_043142445.1;transl_table=11 NZ_JPQY01000030.1 RefSeq gene 37786 38682 . + . ID=gene-IY40_RS19100;Name=galU;gbkey=Gene;gene=galU;gene_biotype=protein_coding;locus_tag=IY40_RS19100;old_locus_tag=IY40_19430 NZ_JPQY01000030.1 Protein Homology CDS 37786 38682 . + 0 ID=cds-WP_043142457.1;Parent=gene-IY40_RS19100;Dbxref=GenBank:WP_043142457.1;Name=WP_043142457.1;Ontology_term=GO:0006011,GO:0003983;gbkey=CDS;gene=galU;go_function=UTP:glucose-1-phosphate uridylyltransferase activity|0003983||IEA;go_process=UDP-alpha-D-glucose metabolic process|0006011||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015377224.1;locus_tag=IY40_RS19100;product=UTP--glucose-1-phosphate uridylyltransferase GalU;protein_id=WP_043142457.1;transl_table=11 NZ_JPQY01000030.1 RefSeq gene 38736 39638 . + . ID=gene-IY40_RS19105;Name=IY40_RS19105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS19105;old_locus_tag=IY40_19435 NZ_JPQY01000030.1 Protein Homology CDS 38736 39638 . + 0 ID=cds-WP_043142447.1;Parent=gene-IY40_RS19105;Dbxref=GenBank:WP_043142447.1;Name=WP_043142447.1;Ontology_term=GO:0009058,GO:0016779;gbkey=CDS;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017892179.1;locus_tag=IY40_RS19105;product=sugar phosphate nucleotidyltransferase;protein_id=WP_043142447.1;transl_table=11 NZ_JPQY01000030.1 RefSeq gene 40054 41190 . + . ID=gene-IY40_RS19110;Name=IY40_RS19110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS19110;old_locus_tag=IY40_19440 NZ_JPQY01000030.1 Protein Homology CDS 40054 41190 . + 0 ID=cds-WP_043142459.1;Parent=gene-IY40_RS19110;Dbxref=GenBank:WP_043142459.1;Name=WP_043142459.1;Ontology_term=GO:0015774,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=polysaccharide transport|0015774||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017892180.1;locus_tag=IY40_RS19110;product=polysaccharide export protein;protein_id=WP_043142459.1;transl_table=11 NZ_JPQY01000030.1 RefSeq gene 41201 41635 . + . ID=gene-IY40_RS25440;Name=IY40_RS25440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS25440 NZ_JPQY01000030.1 Protein Homology CDS 41201 41635 . + 0 ID=cds-WP_072008271.1;Parent=gene-IY40_RS25440;Dbxref=GenBank:WP_072008271.1;Name=WP_072008271.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010296762.1;locus_tag=IY40_RS25440;product=arsenate reductase/protein-tyrosine-phosphatase family protein;protein_id=WP_072008271.1;transl_table=11 NZ_JPQY01000030.1 RefSeq gene 41648 43801 . + . ID=gene-IY40_RS19115;Name=wzc;gbkey=Gene;gene=wzc;gene_biotype=protein_coding;locus_tag=IY40_RS19115;old_locus_tag=IY40_19445 NZ_JPQY01000030.1 Protein Homology CDS 41648 43801 . + 0 ID=cds-WP_043142450.1;Parent=gene-IY40_RS19115;Dbxref=GenBank:WP_043142450.1;Name=WP_043142450.1;Ontology_term=GO:0009103,GO:0016020;gbkey=CDS;gene=wzc;go_component=membrane|0016020||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004942392.1;locus_tag=IY40_RS19115;product=tyrosine-protein kinase Wzc;protein_id=WP_043142450.1;transl_table=11 NZ_JPQY01000030.1 RefSeq gene 43892 44581 . + . ID=gene-IY40_RS19120;Name=IY40_RS19120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS19120;old_locus_tag=IY40_19450 NZ_JPQY01000030.1 Protein Homology CDS 43892 44581 . + 0 ID=cds-WP_043142452.1;Parent=gene-IY40_RS19120;Dbxref=GenBank:WP_043142452.1;Name=WP_043142452.1;Ontology_term=GO:0016779;gbkey=CDS;go_function=nucleotidyltransferase activity|0016779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004965276.1;locus_tag=IY40_RS19120;product=acylneuraminate cytidylyltransferase family protein;protein_id=WP_043142452.1;transl_table=11 NZ_JPQY01000030.1 RefSeq gene 44585 44959 . + . ID=gene-IY40_RS19125;Name=IY40_RS19125;end_range=44959,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS19125;old_locus_tag=IY40_19455;partial=true NZ_JPQY01000030.1 Protein Homology CDS 44585 44959 . + 0 ID=cds-WP_043142455.1;Parent=gene-IY40_RS19125;Dbxref=GenBank:WP_043142455.1;Name=WP_043142455.1;end_range=44959,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004965274.1;locus_tag=IY40_RS19125;partial=true;product=CBS domain-containing protein;protein_id=WP_043142455.1;transl_table=11 ##sequence-region NZ_JPQY01000031.1 1 70721 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=615 NZ_JPQY01000031.1 RefSeq region 1 70721 . + . ID=NZ_JPQY01000031.1:1..70721;Dbxref=taxon:615;collected-by=Mahloro H. Serepa%3B Vincent M. Gray;collection-date=2013-04-11;country=South Africa: North West Province;gbkey=Src;genome=genomic;identified-by=Mahloro H. Serepa%3B Vincent M. Gray;isolation-source=entomopathogenic nematode Oscheius sp. MCB living in soil;mol_type=genomic DNA;nat-host=Oscheius sp. MCB;strain=MCB NZ_JPQY01000031.1 RefSeq gene 1 1283 . + . ID=gene-IY40_RS19130;Name=IY40_RS19130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS19130;old_locus_tag=IY40_19460;partial=true;start_range=.,1 NZ_JPQY01000031.1 Protein Homology CDS 1 1283 . + 2 ID=cds-WP_043142465.1;Parent=gene-IY40_RS19130;Dbxref=GenBank:WP_043142465.1;Name=WP_043142465.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004932156.1;locus_tag=IY40_RS19130;partial=true;product=ABC transporter substrate-binding protein;protein_id=WP_043142465.1;start_range=.,1;transl_table=11 NZ_JPQY01000031.1 RefSeq gene 1431 3068 . + . ID=gene-IY40_RS19135;Name=oppA;gbkey=Gene;gene=oppA;gene_biotype=protein_coding;locus_tag=IY40_RS19135;old_locus_tag=IY40_19465 NZ_JPQY01000031.1 Protein Homology CDS 1431 3068 . + 0 ID=cds-WP_025303074.1;Parent=gene-IY40_RS19135;Dbxref=GenBank:WP_025303074.1;Name=WP_025303074.1;Ontology_term=GO:0055085,GO:0043190;gbkey=CDS;gene=oppA;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004945311.1;locus_tag=IY40_RS19135;product=oligopeptide ABC transporter substrate-binding protein OppA;protein_id=WP_025303074.1;transl_table=11 NZ_JPQY01000031.1 RefSeq gene 3152 4072 . + . ID=gene-IY40_RS19140;Name=oppB;gbkey=Gene;gene=oppB;gene_biotype=protein_coding;locus_tag=IY40_RS19140;old_locus_tag=IY40_19470 NZ_JPQY01000031.1 Protein Homology CDS 3152 4072 . + 0 ID=cds-WP_004932150.1;Parent=gene-IY40_RS19140;Dbxref=GenBank:WP_004932150.1;Name=WP_004932150.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=oppB;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126405.1;locus_tag=IY40_RS19140;product=oligopeptide ABC transporter permease OppB;protein_id=WP_004932150.1;transl_table=11 NZ_JPQY01000031.1 RefSeq gene 4087 4995 . + . ID=gene-IY40_RS19145;Name=oppC;gbkey=Gene;gene=oppC;gene_biotype=protein_coding;locus_tag=IY40_RS19145;old_locus_tag=IY40_19475 NZ_JPQY01000031.1 Protein Homology CDS 4087 4995 . + 0 ID=cds-WP_025303073.1;Parent=gene-IY40_RS19145;Dbxref=GenBank:WP_025303073.1;Name=WP_025303073.1;Ontology_term=GO:0055085;gbkey=CDS;gene=oppC;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000979653.1;locus_tag=IY40_RS19145;product=oligopeptide ABC transporter permease OppC;protein_id=WP_025303073.1;transl_table=11 NZ_JPQY01000031.1 RefSeq gene 5007 6023 . + . ID=gene-IY40_RS19150;Name=oppD;gbkey=Gene;gene=oppD;gene_biotype=protein_coding;locus_tag=IY40_RS19150;old_locus_tag=IY40_19480 NZ_JPQY01000031.1 Protein Homology CDS 5007 6023 . + 0 ID=cds-WP_043142468.1;Parent=gene-IY40_RS19150;Dbxref=GenBank:WP_043142468.1;Name=WP_043142468.1;gbkey=CDS;gene=oppD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019452738.1;locus_tag=IY40_RS19150;product=ABC transporter ATP-binding protein;protein_id=WP_043142468.1;transl_table=11 NZ_JPQY01000031.1 RefSeq gene 6020 7021 . + . ID=gene-IY40_RS19155;Name=oppF;gbkey=Gene;gene=oppF;gene_biotype=protein_coding;locus_tag=IY40_RS19155;old_locus_tag=IY40_19485 NZ_JPQY01000031.1 Protein Homology CDS 6020 7021 . + 0 ID=cds-WP_025303071.1;Parent=gene-IY40_RS19155;Dbxref=GenBank:WP_025303071.1;Name=WP_025303071.1;Ontology_term=GO:0015833,GO:0005524;gbkey=CDS;gene=oppF;go_function=ATP binding|0005524||IEA;go_process=peptide transport|0015833||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227487.1;locus_tag=IY40_RS19155;product=murein tripeptide/oligopeptide ABC transporter ATP binding protein OppF;protein_id=WP_025303071.1;transl_table=11 NZ_JPQY01000031.1 RefSeq gene 7094 7417 . - . ID=gene-IY40_RS19160;Name=IY40_RS19160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS19160;old_locus_tag=IY40_19490 NZ_JPQY01000031.1 Protein Homology CDS 7094 7417 . - 0 ID=cds-WP_004932139.1;Parent=gene-IY40_RS19160;Dbxref=GenBank:WP_004932139.1;Name=WP_004932139.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210649.1;locus_tag=IY40_RS19160;product=HI1450 family dsDNA-mimic protein;protein_id=WP_004932139.1;transl_table=11 NZ_JPQY01000031.1 RefSeq gene 7474 8934 . - . ID=gene-IY40_RS19165;Name=cls;gbkey=Gene;gene=cls;gene_biotype=protein_coding;locus_tag=IY40_RS19165;old_locus_tag=IY40_19495 NZ_JPQY01000031.1 Protein Homology CDS 7474 8934 . - 0 ID=cds-WP_025303070.1;Parent=gene-IY40_RS19165;Dbxref=GenBank:WP_025303070.1;Name=WP_025303070.1;Ontology_term=GO:0032049,GO:0008808,GO:0016780;gbkey=CDS;gene=cls;go_function=cardiolipin synthase activity|0008808||IEA,phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA;go_process=cardiolipin biosynthetic process|0032049||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126413.1;locus_tag=IY40_RS19165;product=cardiolipin synthase;protein_id=WP_025303070.1;transl_table=11 NZ_JPQY01000031.1 RefSeq gene 9177 9353 . + . ID=gene-IY40_RS19170;Name=IY40_RS19170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS19170;old_locus_tag=IY40_19500 NZ_JPQY01000031.1 Protein Homology CDS 9177 9353 . + 0 ID=cds-WP_025159792.1;Parent=gene-IY40_RS19170;Dbxref=GenBank:WP_025159792.1;Name=WP_025159792.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004945296.1;locus_tag=IY40_RS19170;product=YciY family protein;protein_id=WP_025159792.1;transl_table=11 NZ_JPQY01000031.1 RefSeq gene 9399 9890 . - . ID=gene-IY40_RS19175;Name=IY40_RS19175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS19175;old_locus_tag=IY40_19505 NZ_JPQY01000031.1 Protein Homology CDS 9399 9890 . - 0 ID=cds-WP_043142470.1;Parent=gene-IY40_RS19175;Dbxref=GenBank:WP_043142470.1;Name=WP_043142470.1;Ontology_term=GO:0008199,GO:0016722;gbkey=CDS;go_function=ferric iron binding|0008199||IEA,oxidoreductase activity%2C acting on metal ions|0016722||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012145415.1;locus_tag=IY40_RS19175;product=Dps family protein;protein_id=WP_043142470.1;transl_table=11 NZ_JPQY01000031.1 RefSeq gene 10091 11563 . - . ID=gene-IY40_RS19180;Name=smfY;gbkey=Gene;gene=smfY;gene_biotype=protein_coding;locus_tag=IY40_RS19180;old_locus_tag=IY40_19510 NZ_JPQY01000031.1 Protein Homology CDS 10091 11563 . - 0 ID=cds-WP_025303068.1;Parent=gene-IY40_RS19180;Dbxref=GenBank:WP_025303068.1;Name=WP_025303068.1;gbkey=CDS;gene=smfY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015378085.1;locus_tag=IY40_RS19180;product=multidrug efflux MFS transporter SmfY;protein_id=WP_025303068.1;transl_table=11 NZ_JPQY01000031.1 RefSeq gene 11691 12254 . + . ID=gene-IY40_RS19185;Name=IY40_RS19185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS19185;old_locus_tag=IY40_19515 NZ_JPQY01000031.1 Protein Homology CDS 11691 12254 . + 0 ID=cds-WP_025303067.1;Parent=gene-IY40_RS19185;Dbxref=GenBank:WP_025303067.1;Name=WP_025303067.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004932127.1;locus_tag=IY40_RS19185;product=TetR/AcrR family transcriptional regulator;protein_id=WP_025303067.1;transl_table=11 NZ_JPQY01000031.1 RefSeq gene 12398 13405 . - . ID=gene-IY40_RS19190;Name=IY40_RS19190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS19190;old_locus_tag=IY40_19520 NZ_JPQY01000031.1 Protein Homology CDS 12398 13405 . - 0 ID=cds-WP_025303066.1;Parent=gene-IY40_RS19190;Dbxref=GenBank:WP_025303066.1;Name=WP_025303066.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002422709.1;locus_tag=IY40_RS19190;product=substrate-binding domain-containing protein;protein_id=WP_025303066.1;transl_table=11 NZ_JPQY01000031.1 RefSeq gene 13439 14416 . - . ID=gene-IY40_RS19195;Name=IY40_RS19195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS19195;old_locus_tag=IY40_19525 NZ_JPQY01000031.1 Protein Homology CDS 13439 14416 . - 0 ID=cds-WP_016927501.1;Parent=gene-IY40_RS19195;Dbxref=GenBank:WP_016927501.1;Name=WP_016927501.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019452730.1;locus_tag=IY40_RS19195;product=ABC transporter permease;protein_id=WP_016927501.1;transl_table=11 NZ_JPQY01000031.1 RefSeq gene 14493 15998 . - . ID=gene-IY40_RS19200;Name=IY40_RS19200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS19200;old_locus_tag=IY40_19530 NZ_JPQY01000031.1 Protein Homology CDS 14493 15998 . - 0 ID=cds-WP_043142474.1;Parent=gene-IY40_RS19200;Dbxref=GenBank:WP_043142474.1;Name=WP_043142474.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004932117.1;locus_tag=IY40_RS19200;product=sugar ABC transporter ATP-binding protein;protein_id=WP_043142474.1;transl_table=11 NZ_JPQY01000031.1 RefSeq gene 15995 17512 . - . ID=gene-IY40_RS19205;Name=xylB;gbkey=Gene;gene=xylB;gene_biotype=protein_coding;locus_tag=IY40_RS19205;old_locus_tag=IY40_19535 NZ_JPQY01000031.1 Protein Homology CDS 15995 17512 . - 0 ID=cds-WP_043142477.1;Parent=gene-IY40_RS19205;Dbxref=GenBank:WP_043142477.1;Name=WP_043142477.1;Ontology_term=GO:0005997,GO:0004856;gbkey=CDS;gene=xylB;go_function=D-xylulokinase activity|0004856||IEA;go_process=xylulose metabolic process|0005997||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015378082.1;locus_tag=IY40_RS19205;product=xylulokinase;protein_id=WP_043142477.1;transl_table=11 NZ_JPQY01000031.1 RefSeq gene 17517 18551 . - . ID=gene-IY40_RS19210;Name=IY40_RS19210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS19210;old_locus_tag=IY40_19540 NZ_JPQY01000031.1 Protein Homology CDS 17517 18551 . - 0 ID=cds-WP_043142480.1;Parent=gene-IY40_RS19210;Dbxref=GenBank:WP_043142480.1;Name=WP_043142480.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004932112.1;locus_tag=IY40_RS19210;product=NAD(P)-dependent alcohol dehydrogenase;protein_id=WP_043142480.1;transl_table=11 NZ_JPQY01000031.1 RefSeq gene 18780 19334 . + . ID=gene-IY40_RS19215;Name=IY40_RS19215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS19215;old_locus_tag=IY40_19545 NZ_JPQY01000031.1 Protein Homology CDS 18780 19334 . + 0 ID=cds-WP_043142542.1;Parent=gene-IY40_RS19215;Dbxref=GenBank:WP_043142542.1;Name=WP_043142542.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015378080.1;locus_tag=IY40_RS19215;product=D-lyxose/D-mannose family sugar isomerase;protein_id=WP_043142542.1;transl_table=11 NZ_JPQY01000031.1 RefSeq gene 19405 20406 . + . ID=gene-IY40_RS19220;Name=IY40_RS19220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS19220;old_locus_tag=IY40_19550 NZ_JPQY01000031.1 Protein Homology CDS 19405 20406 . + 0 ID=cds-WP_025303060.1;Parent=gene-IY40_RS19220;Dbxref=GenBank:WP_025303060.1;Name=WP_025303060.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015378079.1;locus_tag=IY40_RS19220;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_025303060.1;transl_table=11 NZ_JPQY01000031.1 RefSeq gene 20431 21387 . - . ID=gene-IY40_RS19225;Name=IY40_RS19225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS19225;old_locus_tag=IY40_19555 NZ_JPQY01000031.1 Protein Homology CDS 20431 21387 . - 0 ID=cds-WP_043142483.1;Parent=gene-IY40_RS19225;Dbxref=GenBank:WP_043142483.1;Name=WP_043142483.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004932102.1;locus_tag=IY40_RS19225;product=DMT family transporter;protein_id=WP_043142483.1;transl_table=11 NZ_JPQY01000031.1 RefSeq gene 21479 22333 . + . ID=gene-IY40_RS19230;Name=IY40_RS19230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS19230;old_locus_tag=IY40_19560 NZ_JPQY01000031.1 Protein Homology CDS 21479 22333 . + 0 ID=cds-WP_043142486.1;Parent=gene-IY40_RS19230;Dbxref=GenBank:WP_043142486.1;Name=WP_043142486.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016927507.1;locus_tag=IY40_RS19230;product=LysR substrate-binding domain-containing protein;protein_id=WP_043142486.1;transl_table=11 NZ_JPQY01000031.1 RefSeq gene 22442 22738 . - . ID=gene-IY40_RS19235;Name=IY40_RS19235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS19235;old_locus_tag=IY40_19565 NZ_JPQY01000031.1 Protein Homology CDS 22442 22738 . - 0 ID=cds-WP_004932096.1;Parent=gene-IY40_RS19235;Dbxref=GenBank:WP_004932096.1;Name=WP_004932096.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415767.2;locus_tag=IY40_RS19235;product=YciI family protein;protein_id=WP_004932096.1;transl_table=11 NZ_JPQY01000031.1 RefSeq gene 22914 23567 . + . ID=gene-IY40_RS19240;Name=IY40_RS19240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS19240;old_locus_tag=IY40_19570 NZ_JPQY01000031.1 Protein Homology CDS 22914 23567 . + 0 ID=cds-WP_025303057.1;Parent=gene-IY40_RS19240;Dbxref=GenBank:WP_025303057.1;Name=WP_025303057.1;Ontology_term=GO:0008033,GO:0008616,GO:0046872,GO:0051539,GO:0052693;gbkey=CDS;go_function=metal ion binding|0046872||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,epoxyqueuosine reductase activity|0052693||IEA;go_process=tRNA processing|0008033||IEA,tRNA queuosine(34) biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006321171.1;locus_tag=IY40_RS19240;product=epoxyqueuosine reductase QueH;protein_id=WP_025303057.1;transl_table=11 NZ_JPQY01000031.1 RefSeq gene 23804 24547 . + . ID=gene-IY40_RS19245;Name=tonB;gbkey=Gene;gene=tonB;gene_biotype=protein_coding;locus_tag=IY40_RS19245;old_locus_tag=IY40_19575 NZ_JPQY01000031.1 Protein Homology CDS 23804 24547 . + 0 ID=cds-WP_043142488.1;Parent=gene-IY40_RS19245;Dbxref=GenBank:WP_043142488.1;Name=WP_043142488.1;gbkey=CDS;gene=tonB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015378072.1;locus_tag=IY40_RS19245;product=TonB system transport protein TonB;protein_id=WP_043142488.1;transl_table=11 NZ_JPQY01000031.1 RefSeq gene 25130 26152 . + . ID=gene-IY40_RS19250;Name=bioB;gbkey=Gene;gene=bioB;gene_biotype=protein_coding;locus_tag=IY40_RS19250;old_locus_tag=IY40_19580 NZ_JPQY01000031.1 Protein Homology CDS 25130 26152 . + 0 ID=cds-WP_043142490.1;Parent=gene-IY40_RS19250;Dbxref=GenBank:WP_043142490.1;Name=WP_043142490.1;Ontology_term=GO:0009102,GO:0004076,GO:0051536,GO:1904047;gbkey=CDS;gene=bioB;go_function=biotin synthase activity|0004076||IEA,iron-sulfur cluster binding|0051536||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019452721.1;locus_tag=IY40_RS19250;product=biotin synthase BioB;protein_id=WP_043142490.1;transl_table=11 NZ_JPQY01000031.1 RefSeq gene 26222 26650 . - . ID=gene-IY40_RS19255;Name=yciA;gbkey=Gene;gene=yciA;gene_biotype=protein_coding;locus_tag=IY40_RS19255;old_locus_tag=IY40_19585 NZ_JPQY01000031.1 Protein Homology CDS 26222 26650 . - 0 ID=cds-WP_004932085.1;Parent=gene-IY40_RS19255;Dbxref=GenBank:WP_004932085.1;Name=WP_004932085.1;Ontology_term=GO:0016790;gbkey=CDS;gene=yciA;go_function=thiolester hydrolase activity|0016790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004945276.1;locus_tag=IY40_RS19255;product=acyl-CoA thioester hydrolase YciA;protein_id=WP_004932085.1;transl_table=11 NZ_JPQY01000031.1 RefSeq gene 26727 27266 . - . ID=gene-IY40_RS19260;Name=IY40_RS19260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS19260;old_locus_tag=IY40_19590 NZ_JPQY01000031.1 Protein Homology CDS 26727 27266 . - 0 ID=cds-WP_016927511.1;Parent=gene-IY40_RS19260;Dbxref=GenBank:WP_016927511.1;Name=WP_016927511.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012145404.1;locus_tag=IY40_RS19260;product=septation protein A;protein_id=WP_016927511.1;transl_table=11 NZ_JPQY01000031.1 RefSeq gene 27489 29192 . + . ID=gene-IY40_RS19265;Name=IY40_RS19265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS19265;old_locus_tag=IY40_19595 NZ_JPQY01000031.1 Protein Homology CDS 27489 29192 . + 0 ID=cds-WP_025303055.1;Parent=gene-IY40_RS19265;Dbxref=GenBank:WP_025303055.1;Name=WP_025303055.1;Ontology_term=GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004932080.1;locus_tag=IY40_RS19265;product=SulP family inorganic anion transporter;protein_id=WP_025303055.1;transl_table=11 NZ_JPQY01000031.1 RefSeq gene 29246 29998 . - . ID=gene-IY40_RS19270;Name=IY40_RS19270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS19270;old_locus_tag=IY40_19600 NZ_JPQY01000031.1 Protein Homology CDS 29246 29998 . - 0 ID=cds-WP_016927513.1;Parent=gene-IY40_RS19270;Dbxref=GenBank:WP_016927513.1;Name=WP_016927513.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004932079.1;locus_tag=IY40_RS19270;product=YciC family protein;protein_id=WP_016927513.1;transl_table=11 NZ_JPQY01000031.1 RefSeq gene 30033 30473 . - . ID=gene-IY40_RS19275;Name=IY40_RS19275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS19275;old_locus_tag=IY40_19605 NZ_JPQY01000031.1 Protein Homology CDS 30033 30473 . - 0 ID=cds-WP_025303054.1;Parent=gene-IY40_RS19275;Dbxref=GenBank:WP_025303054.1;Name=WP_025303054.1;Ontology_term=GO:0046872,GO:0051536;gbkey=CDS;go_function=metal ion binding|0046872||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004945265.1;locus_tag=IY40_RS19275;product=YkgJ family cysteine cluster protein;protein_id=WP_025303054.1;transl_table=11 NZ_JPQY01000031.1 RefSeq gene 30760 31392 . + . ID=gene-IY40_RS19280;Name=ompW;gbkey=Gene;gene=ompW;gene_biotype=protein_coding;locus_tag=IY40_RS19280;old_locus_tag=IY40_19610 NZ_JPQY01000031.1 Protein Homology CDS 30760 31392 . + 0 ID=cds-WP_016927514.1;Parent=gene-IY40_RS19280;Dbxref=GenBank:WP_016927514.1;Name=WP_016927514.1;Ontology_term=GO:0019867;gbkey=CDS;gene=ompW;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192441.1;locus_tag=IY40_RS19280;product=outer membrane protein OmpW;protein_id=WP_016927514.1;transl_table=11 NZ_JPQY01000031.1 RefSeq gene 31438 31752 . - . ID=gene-IY40_RS19285;Name=IY40_RS19285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS19285;old_locus_tag=IY40_19615 NZ_JPQY01000031.1 Protein Homology CDS 31438 31752 . - 0 ID=cds-WP_025303053.1;Parent=gene-IY40_RS19285;Dbxref=GenBank:WP_025303053.1;Name=WP_025303053.1;Ontology_term=GO:0008289;gbkey=CDS;go_function=lipid binding|0008289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210636.1;locus_tag=IY40_RS19285;product=BON domain-containing protein;protein_id=WP_025303053.1;transl_table=11 NZ_JPQY01000031.1 RefSeq gene 31970 32776 . - . ID=gene-IY40_RS19290;Name=trpA;gbkey=Gene;gene=trpA;gene_biotype=protein_coding;locus_tag=IY40_RS19290;old_locus_tag=IY40_19620 NZ_JPQY01000031.1 Protein Homology CDS 31970 32776 . - 0 ID=cds-WP_025303052.1;Parent=gene-IY40_RS19290;Dbxref=GenBank:WP_025303052.1;Name=WP_025303052.1;Ontology_term=GO:0000162,GO:0004834;gbkey=CDS;gene=trpA;go_function=tryptophan synthase activity|0004834||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019079505.1;locus_tag=IY40_RS19290;product=tryptophan synthase subunit alpha;protein_id=WP_025303052.1;transl_table=11 NZ_JPQY01000031.1 RefSeq gene 32776 33966 . - . ID=gene-IY40_RS19295;Name=trpB;gbkey=Gene;gene=trpB;gene_biotype=protein_coding;locus_tag=IY40_RS19295;old_locus_tag=IY40_19625 NZ_JPQY01000031.1 Protein Homology CDS 32776 33966 . - 0 ID=cds-WP_025303051.1;Parent=gene-IY40_RS19295;Dbxref=GenBank:WP_025303051.1;Name=WP_025303051.1;Ontology_term=GO:0000162,GO:0004834;gbkey=CDS;gene=trpB;go_function=tryptophan synthase activity|0004834||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019083174.1;locus_tag=IY40_RS19295;product=tryptophan synthase subunit beta;protein_id=WP_025303051.1;transl_table=11 NZ_JPQY01000031.1 RefSeq gene 34008 35369 . - . ID=gene-IY40_RS19300;Name=trpCF;gbkey=Gene;gene=trpCF;gene_biotype=protein_coding;locus_tag=IY40_RS19300;old_locus_tag=IY40_19630 NZ_JPQY01000031.1 Protein Homology CDS 34008 35369 . - 0 ID=cds-WP_200877950.1;Parent=gene-IY40_RS19300;Dbxref=GenBank:WP_200877950.1;Name=WP_200877950.1;Ontology_term=GO:0006568,GO:0004425,GO:0004640;gbkey=CDS;gene=trpCF;go_function=indole-3-glycerol-phosphate synthase activity|0004425||IEA,phosphoribosylanthranilate isomerase activity|0004640||IEA;go_process=L-tryptophan metabolic process|0006568||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004932068.1;locus_tag=IY40_RS19300;product=bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF;protein_id=WP_200877950.1;transl_table=11 NZ_JPQY01000031.1 RefSeq pseudogene 35373 36969 . - . ID=gene-IY40_RS26515;Name=trpD;gbkey=Gene;gene=trpD;gene_biotype=pseudogene;locus_tag=IY40_RS26515;pseudo=true NZ_JPQY01000031.1 Protein Homology CDS 35373 36969 . - 0 ID=cds-IY40_RS26515;Parent=gene-IY40_RS26515;Note=frameshifted;Ontology_term=GO:0000162,GO:0004048;gbkey=CDS;gene=trpD;go_function=anthranilate phosphoribosyltransferase activity|0004048||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226462.1;locus_tag=IY40_RS26515;product=bifunctional anthranilate synthase glutamate amidotransferase component TrpG/anthranilate phosphoribosyltransferase TrpD;pseudo=true;transl_table=11 NZ_JPQY01000031.1 RefSeq gene 36969 38531 . - . ID=gene-IY40_RS19315;Name=IY40_RS19315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS19315;old_locus_tag=IY40_19645 NZ_JPQY01000031.1 Protein Homology CDS 36969 38531 . - 0 ID=cds-WP_025303047.1;Parent=gene-IY40_RS19315;Dbxref=GenBank:WP_025303047.1;Name=WP_025303047.1;Ontology_term=GO:0009058,GO:0004049;gbkey=CDS;go_function=anthranilate synthase activity|0004049||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004945236.1;locus_tag=IY40_RS19315;product=anthranilate synthase component 1;protein_id=WP_025303047.1;transl_table=11 NZ_JPQY01000031.1 cmsearch sequence_feature 38556 38659 . - . ID=id-NZ_JPQY01000031.1:38556..38659;Dbxref=RFAM:RF00513;Note=Trp leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.5 NZ_JPQY01000031.1 RefSeq gene 38912 39793 . + . ID=gene-IY40_RS19320;Name=rnm;gbkey=Gene;gene=rnm;gene_biotype=protein_coding;gene_synonym=trpH,yciV;locus_tag=IY40_RS19320;old_locus_tag=IY40_19650 NZ_JPQY01000031.1 Protein Homology CDS 38912 39793 . + 0 ID=cds-WP_043142502.1;Parent=gene-IY40_RS19320;Dbxref=GenBank:WP_043142502.1;Name=WP_043142502.1;Ontology_term=GO:0006364,GO:0004534,GO:0035312,GO:0097657;gbkey=CDS;gene=rnm;go_function=5'-3' RNA exonuclease activity|0004534||IEA,5'-3' DNA exonuclease activity|0035312||IEA,3'%2C5'-nucleotide bisphosphate phosphatase activity|0097657||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004932060.1;locus_tag=IY40_RS19320;product=RNase RNM;protein_id=WP_043142502.1;transl_table=11 NZ_JPQY01000031.1 RefSeq gene 39841 40461 . + . ID=gene-IY40_RS19325;Name=IY40_RS19325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS19325;old_locus_tag=IY40_19655 NZ_JPQY01000031.1 Protein Homology CDS 39841 40461 . + 0 ID=cds-WP_025303045.1;Parent=gene-IY40_RS19325;Dbxref=GenBank:WP_025303045.1;Name=WP_025303045.1;Ontology_term=GO:0006400,GO:0003725,GO:0061710;gbkey=CDS;go_function=double-stranded RNA binding|0003725||IEA,L-threonylcarbamoyladenylate synthase|0061710||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004390873.1;locus_tag=IY40_RS19325;product=L-threonylcarbamoyladenylate synthase;protein_id=WP_025303045.1;transl_table=11 NZ_JPQY01000031.1 RefSeq gene 40577 40936 . + . ID=gene-IY40_RS19330;Name=IY40_RS19330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS19330;old_locus_tag=IY40_19660 NZ_JPQY01000031.1 Protein Homology CDS 40577 40936 . + 0 ID=cds-WP_025303044.1;Parent=gene-IY40_RS19330;Dbxref=GenBank:WP_025303044.1;Name=WP_025303044.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006321147.1;locus_tag=IY40_RS19330;product=Rap1a/Tai family immunity protein;protein_id=WP_025303044.1;transl_table=11 NZ_JPQY01000031.1 RefSeq gene 41086 41883 . + . ID=gene-IY40_RS19335;Name=IY40_RS19335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS19335;old_locus_tag=IY40_19665 NZ_JPQY01000031.1 Protein Homology CDS 41086 41883 . + 0 ID=cds-WP_043142506.1;Parent=gene-IY40_RS19335;Dbxref=GenBank:WP_043142506.1;Name=WP_043142506.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016927524.1;locus_tag=IY40_RS19335;product=alpha/beta fold hydrolase;protein_id=WP_043142506.1;transl_table=11 NZ_JPQY01000031.1 RefSeq gene 42046 42951 . + . ID=gene-IY40_RS19340;Name=rluB;gbkey=Gene;gene=rluB;gene_biotype=protein_coding;locus_tag=IY40_RS19340;old_locus_tag=IY40_19670 NZ_JPQY01000031.1 Protein Homology CDS 42046 42951 . + 0 ID=cds-WP_025303042.1;Parent=gene-IY40_RS19340;Dbxref=GenBank:WP_025303042.1;Name=WP_025303042.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;gene=rluB;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017893026.1;locus_tag=IY40_RS19340;product=23S rRNA pseudouridine(2605) synthase RluB;protein_id=WP_025303042.1;transl_table=11 NZ_JPQY01000031.1 RefSeq gene 42990 43580 . - . ID=gene-IY40_RS19345;Name=cobO;gbkey=Gene;gene=cobO;gene_biotype=protein_coding;locus_tag=IY40_RS19345;old_locus_tag=IY40_19675 NZ_JPQY01000031.1 Protein Homology CDS 42990 43580 . - 0 ID=cds-WP_025303041.1;Parent=gene-IY40_RS19345;Dbxref=GenBank:WP_025303041.1;Name=WP_025303041.1;Ontology_term=GO:0009236,GO:0008817;gbkey=CDS;gene=cobO;go_function=corrinoid adenosyltransferase activity|0008817||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019079496.1;locus_tag=IY40_RS19345;product=cob(I)yrinic acid a%2Cc-diamide adenosyltransferase;protein_id=WP_025303041.1;transl_table=11 NZ_JPQY01000031.1 RefSeq gene 43594 44355 . - . ID=gene-IY40_RS19350;Name=IY40_RS19350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS19350;old_locus_tag=IY40_19680 NZ_JPQY01000031.1 Protein Homology CDS 43594 44355 . - 0 ID=cds-WP_025303040.1;Parent=gene-IY40_RS19350;Dbxref=GenBank:WP_025303040.1;Name=WP_025303040.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005164229.1;locus_tag=IY40_RS19350;product=YciK family oxidoreductase;protein_id=WP_025303040.1;transl_table=11 NZ_JPQY01000031.1 RefSeq gene 44715 45761 . + . ID=gene-IY40_RS19355;Name=sohB;gbkey=Gene;gene=sohB;gene_biotype=protein_coding;locus_tag=IY40_RS19355;old_locus_tag=IY40_19685 NZ_JPQY01000031.1 Protein Homology CDS 44715 45761 . + 0 ID=cds-WP_004930703.1;Parent=gene-IY40_RS19355;Dbxref=GenBank:WP_004930703.1;Name=WP_004930703.1;Ontology_term=GO:0006508,GO:0008233;gbkey=CDS;gene=sohB;go_function=peptidase activity|0008233||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004699213.1;locus_tag=IY40_RS19355;product=protease SohB;protein_id=WP_004930703.1;transl_table=11 NZ_JPQY01000031.1 RefSeq gene 45813 46064 . - . ID=gene-IY40_RS19360;Name=IY40_RS19360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS19360;old_locus_tag=IY40_19690 NZ_JPQY01000031.1 Protein Homology CDS 45813 46064 . - 0 ID=cds-WP_033650243.1;Parent=gene-IY40_RS19360;Dbxref=GenBank:WP_033650243.1;Name=WP_033650243.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105106.1;locus_tag=IY40_RS19360;product=YciN family protein;protein_id=WP_033650243.1;transl_table=11 NZ_JPQY01000031.1 RefSeq gene 46492 49089 . + . ID=gene-IY40_RS19365;Name=topA;gbkey=Gene;gene=topA;gene_biotype=protein_coding;locus_tag=IY40_RS19365;old_locus_tag=IY40_19695 NZ_JPQY01000031.1 Protein Homology CDS 46492 49089 . + 0 ID=cds-WP_004930691.1;Parent=gene-IY40_RS19365;Dbxref=GenBank:WP_004930691.1;Name=WP_004930691.1;Ontology_term=GO:0006260,GO:0006265,GO:0003677,GO:0003917,GO:0005737;gbkey=CDS;gene=topA;go_component=cytoplasm|0005737||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase type I (single strand cut%2C ATP-independent) activity|0003917||IEA;go_process=DNA replication|0006260||IEA,DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005191581.1;locus_tag=IY40_RS19365;product=type I DNA topoisomerase;protein_id=WP_004930691.1;transl_table=11 NZ_JPQY01000031.1 RefSeq gene 49450 50424 . + . ID=gene-IY40_RS19370;Name=cysB;gbkey=Gene;gene=cysB;gene_biotype=protein_coding;locus_tag=IY40_RS19370;old_locus_tag=IY40_19700 NZ_JPQY01000031.1 Protein Homology CDS 49450 50424 . + 0 ID=cds-WP_004930690.1;Parent=gene-IY40_RS19370;Dbxref=GenBank:WP_004930690.1;Name=WP_004930690.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=cysB;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309874.1;locus_tag=IY40_RS19370;product=HTH-type transcriptional regulator CysB;protein_id=WP_004930690.1;transl_table=11 NZ_JPQY01000031.1 RefSeq gene 50758 53067 . + . ID=gene-IY40_RS19375;Name=IY40_RS19375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS19375;old_locus_tag=IY40_19705 NZ_JPQY01000031.1 Protein Homology CDS 50758 53067 . + 0 ID=cds-WP_043142510.1;Parent=gene-IY40_RS19375;Dbxref=GenBank:WP_043142510.1;Name=WP_043142510.1;Ontology_term=GO:0033103,GO:0033104;gbkey=CDS;go_component=type VI protein secretion system complex|0033104||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019452698.1;locus_tag=IY40_RS19375;product=type VI secretion system Vgr family protein;protein_id=WP_043142510.1;transl_table=11 NZ_JPQY01000031.1 RefSeq gene 53085 53480 . + . ID=gene-IY40_RS19380;Name=IY40_RS19380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS19380;old_locus_tag=IY40_19710 NZ_JPQY01000031.1 Protein Homology CDS 53085 53480 . + 0 ID=cds-WP_043142513.1;Parent=gene-IY40_RS19380;Dbxref=GenBank:WP_043142513.1;Name=WP_043142513.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019452697.1;locus_tag=IY40_RS19380;product=hypothetical protein;protein_id=WP_043142513.1;transl_table=11 NZ_JPQY01000031.1 RefSeq gene 53699 56371 . + . ID=gene-IY40_RS19385;Name=acnA;gbkey=Gene;gene=acnA;gene_biotype=protein_coding;locus_tag=IY40_RS19385;old_locus_tag=IY40_19715 NZ_JPQY01000031.1 Protein Homology CDS 53699 56371 . + 0 ID=cds-WP_043142520.1;Parent=gene-IY40_RS19385;Dbxref=GenBank:WP_043142520.1;Name=WP_043142520.1;Ontology_term=GO:0006099,GO:0003994;gbkey=CDS;gene=acnA;go_function=aconitate hydratase activity|0003994||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005169930.1;locus_tag=IY40_RS19385;product=aconitate hydratase AcnA;protein_id=WP_043142520.1;transl_table=11 NZ_JPQY01000031.1 RefSeq gene 56428 57021 . - . ID=gene-IY40_RS19390;Name=ribA;gbkey=Gene;gene=ribA;gene_biotype=protein_coding;locus_tag=IY40_RS19390;old_locus_tag=IY40_19720 NZ_JPQY01000031.1 Protein Homology CDS 56428 57021 . - 0 ID=cds-WP_025303036.1;Parent=gene-IY40_RS19390;Dbxref=GenBank:WP_025303036.1;Name=WP_025303036.1;Ontology_term=GO:0003935;gbkey=CDS;gene=ribA;go_function=GTP cyclohydrolase II activity|0003935||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015672507.1;locus_tag=IY40_RS19390;product=GTP cyclohydrolase II;protein_id=WP_025303036.1;transl_table=11 NZ_JPQY01000031.1 RefSeq gene 57301 58062 . + . ID=gene-IY40_RS19395;Name=pgpB;gbkey=Gene;gene=pgpB;gene_biotype=protein_coding;locus_tag=IY40_RS19395;old_locus_tag=IY40_19725 NZ_JPQY01000031.1 Protein Homology CDS 57301 58062 . + 0 ID=cds-WP_043142522.1;Parent=gene-IY40_RS19395;Dbxref=GenBank:WP_043142522.1;Name=WP_043142522.1;Ontology_term=GO:0008654,GO:0004609;gbkey=CDS;gene=pgpB;go_function=phosphatidylserine decarboxylase activity|0004609||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004930675.1;locus_tag=IY40_RS19395;product=phosphatidylglycerophosphatase B;protein_id=WP_043142522.1;transl_table=11 NZ_JPQY01000031.1 RefSeq gene 58085 58879 . - . ID=gene-IY40_RS19400;Name=IY40_RS19400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS19400;old_locus_tag=IY40_19730 NZ_JPQY01000031.1 Protein Homology CDS 58085 58879 . - 0 ID=cds-WP_043142524.1;Parent=gene-IY40_RS19400;Dbxref=GenBank:WP_043142524.1;Name=WP_043142524.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006118925.1;locus_tag=IY40_RS19400;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_043142524.1;transl_table=11 NZ_JPQY01000031.1 RefSeq gene 59268 60071 . + . ID=gene-IY40_RS19405;Name=IY40_RS19405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS19405;old_locus_tag=IY40_19735 NZ_JPQY01000031.1 Protein Homology CDS 59268 60071 . + 0 ID=cds-WP_043142526.1;Parent=gene-IY40_RS19405;Dbxref=GenBank:WP_043142526.1;Name=WP_043142526.1;Ontology_term=GO:0016740;gbkey=CDS;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004930671.1;locus_tag=IY40_RS19405;product=transketolase;protein_id=WP_043142526.1;transl_table=11 NZ_JPQY01000031.1 RefSeq gene 60074 60979 . + . ID=gene-IY40_RS19410;Name=IY40_RS19410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS19410;old_locus_tag=IY40_19740 NZ_JPQY01000031.1 Protein Homology CDS 60074 60979 . + 0 ID=cds-WP_043142529.1;Parent=gene-IY40_RS19410;Dbxref=GenBank:WP_043142529.1;Name=WP_043142529.1;Ontology_term=GO:0016740;gbkey=CDS;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004930670.1;locus_tag=IY40_RS19410;product=transketolase family protein;protein_id=WP_043142529.1;transl_table=11 NZ_JPQY01000031.1 RefSeq gene 60989 61789 . + . ID=gene-IY40_RS19415;Name=IY40_RS19415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS19415;old_locus_tag=IY40_19745 NZ_JPQY01000031.1 Protein Homology CDS 60989 61789 . + 0 ID=cds-WP_025303031.1;Parent=gene-IY40_RS19415;Dbxref=GenBank:WP_025303031.1;Name=WP_025303031.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017490035.1;locus_tag=IY40_RS19415;product=GolD/DthD family dehydrogenase;protein_id=WP_025303031.1;transl_table=11 NZ_JPQY01000031.1 RefSeq gene 61853 62785 . + . ID=gene-IY40_RS19420;Name=IY40_RS19420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS19420;old_locus_tag=IY40_19750 NZ_JPQY01000031.1 Protein Homology CDS 61853 62785 . + 0 ID=cds-WP_025303030.1;Parent=gene-IY40_RS19420;Dbxref=GenBank:WP_025303030.1;Name=WP_025303030.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004930664.1;locus_tag=IY40_RS19420;product=D-ribose ABC transporter substrate-binding protein;protein_id=WP_025303030.1;transl_table=11 NZ_JPQY01000031.1 RefSeq gene 62850 63467 . + . ID=gene-IY40_RS19425;Name=IY40_RS19425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS19425;old_locus_tag=IY40_19755 NZ_JPQY01000031.1 Protein Homology CDS 62850 63467 . + 0 ID=cds-WP_025303029.1;Parent=gene-IY40_RS19425;Dbxref=GenBank:WP_025303029.1;Name=WP_025303029.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015378039.1;locus_tag=IY40_RS19425;product=DUF2291 family protein;protein_id=WP_025303029.1;transl_table=11 NZ_JPQY01000031.1 RefSeq gene 63477 64976 . + . ID=gene-IY40_RS19430;Name=IY40_RS19430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS19430;old_locus_tag=IY40_19760 NZ_JPQY01000031.1 Protein Homology CDS 63477 64976 . + 0 ID=cds-WP_043142531.1;Parent=gene-IY40_RS19430;Dbxref=GenBank:WP_043142531.1;Name=WP_043142531.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004930659.1;locus_tag=IY40_RS19430;product=sugar ABC transporter ATP-binding protein;protein_id=WP_043142531.1;transl_table=11 NZ_JPQY01000031.1 RefSeq gene 64987 66051 . + . ID=gene-IY40_RS19435;Name=IY40_RS19435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS19435;old_locus_tag=IY40_19765 NZ_JPQY01000031.1 Protein Homology CDS 64987 66051 . + 0 ID=cds-WP_043142534.1;Parent=gene-IY40_RS19435;Dbxref=GenBank:WP_043142534.1;Name=WP_043142534.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015378037.1;locus_tag=IY40_RS19435;product=ABC transporter permease;protein_id=WP_043142534.1;transl_table=11 NZ_JPQY01000031.1 RefSeq gene 66044 67567 . + . ID=gene-IY40_RS19440;Name=IY40_RS19440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS19440;old_locus_tag=IY40_19770 NZ_JPQY01000031.1 Protein Homology CDS 66044 67567 . + 0 ID=cds-WP_043142536.1;Parent=gene-IY40_RS19440;Dbxref=GenBank:WP_043142536.1;Name=WP_043142536.1;Ontology_term=GO:0005975,GO:0006072,GO:0016310,GO:0005524,GO:0016301;gbkey=CDS;go_function=ATP binding|0005524||IEA,kinase activity|0016301||IEA;go_process=carbohydrate metabolic process|0005975||IEA,glycerol-3-phosphate metabolic process|0006072||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004930654.1;locus_tag=IY40_RS19440;product=FGGY family carbohydrate kinase;protein_id=WP_043142536.1;transl_table=11 NZ_JPQY01000031.1 RefSeq gene 67564 68361 . + . ID=gene-IY40_RS19445;Name=IY40_RS19445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS19445;old_locus_tag=IY40_19775 NZ_JPQY01000031.1 Protein Homology CDS 67564 68361 . + 0 ID=cds-WP_025303025.1;Parent=gene-IY40_RS19445;Dbxref=GenBank:WP_025303025.1;Name=WP_025303025.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225726.1;locus_tag=IY40_RS19445;product=SDR family oxidoreductase;protein_id=WP_025303025.1;transl_table=11 NZ_JPQY01000031.1 RefSeq gene 68654 68956 . + . ID=gene-IY40_RS19450;Name=IY40_RS19450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS19450;old_locus_tag=IY40_19780 NZ_JPQY01000031.1 Protein Homology CDS 68654 68956 . + 0 ID=cds-WP_025303024.1;Parent=gene-IY40_RS19450;Dbxref=GenBank:WP_025303024.1;Name=WP_025303024.1;Ontology_term=GO:0008653,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_process=lipopolysaccharide metabolic process|0008653||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210616.1;locus_tag=IY40_RS19450;product=LapA family protein;protein_id=WP_025303024.1;transl_table=11 NZ_JPQY01000031.1 RefSeq gene 68963 70135 . + . ID=gene-IY40_RS19455;Name=lapB;gbkey=Gene;gene=lapB;gene_biotype=protein_coding;locus_tag=IY40_RS19455;old_locus_tag=IY40_19785 NZ_JPQY01000031.1 Protein Homology CDS 68963 70135 . + 0 ID=cds-WP_025303023.1;Parent=gene-IY40_RS19455;Dbxref=GenBank:WP_025303023.1;Name=WP_025303023.1;Ontology_term=GO:0008653,GO:0005515;gbkey=CDS;gene=lapB;go_function=protein binding|0005515||IEA;go_process=lipopolysaccharide metabolic process|0008653||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000891373.1;locus_tag=IY40_RS19455;product=lipopolysaccharide assembly protein LapB;protein_id=WP_025303023.1;transl_table=11 NZ_JPQY01000031.1 RefSeq gene 70197 70496 . - . ID=gene-IY40_RS19460;Name=IY40_RS19460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS19460;old_locus_tag=IY40_19790 NZ_JPQY01000031.1 Protein Homology CDS 70197 70496 . - 0 ID=cds-WP_043142539.1;Parent=gene-IY40_RS19460;Dbxref=GenBank:WP_043142539.1;Name=WP_043142539.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004930644.1;locus_tag=IY40_RS19460;product=Arc family DNA-binding protein;protein_id=WP_043142539.1;transl_table=11 ##sequence-region NZ_JPQY01000032.1 1 106277 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=615 NZ_JPQY01000032.1 RefSeq region 1 106277 . + . ID=NZ_JPQY01000032.1:1..106277;Dbxref=taxon:615;collected-by=Mahloro H. Serepa%3B Vincent M. Gray;collection-date=2013-04-11;country=South Africa: North West Province;gbkey=Src;genome=genomic;identified-by=Mahloro H. Serepa%3B Vincent M. Gray;isolation-source=entomopathogenic nematode Oscheius sp. MCB living in soil;mol_type=genomic DNA;nat-host=Oscheius sp. MCB;strain=MCB NZ_JPQY01000032.1 RefSeq gene 1 730 . - . ID=gene-IY40_RS19465;Name=IY40_RS19465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS19465;old_locus_tag=IY40_19795;partial=true;start_range=.,1 NZ_JPQY01000032.1 Protein Homology CDS 1 730 . - 0 ID=cds-WP_043142702.1;Parent=gene-IY40_RS19465;Dbxref=GenBank:WP_043142702.1;Name=WP_043142702.1;Ontology_term=GO:0071705,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=nitrogen compound transport|0071705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015378949.1;locus_tag=IY40_RS19465;partial=true;product=BCCT family transporter;protein_id=WP_043142702.1;start_range=.,1;transl_table=11 NZ_JPQY01000032.1 RefSeq gene 889 1485 . + . ID=gene-IY40_RS19470;Name=betI;gbkey=Gene;gene=betI;gene_biotype=protein_coding;locus_tag=IY40_RS19470;old_locus_tag=IY40_19800 NZ_JPQY01000032.1 Protein Homology CDS 889 1485 . + 0 ID=cds-WP_025304099.1;Parent=gene-IY40_RS19470;Dbxref=GenBank:WP_025304099.1;Name=WP_025304099.1;Ontology_term=GO:0003677;gbkey=CDS;gene=betI;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019455683.1;locus_tag=IY40_RS19470;product=transcriptional regulator BetI;protein_id=WP_025304099.1;transl_table=11 NZ_JPQY01000032.1 RefSeq gene 1495 3264 . - . ID=gene-IY40_RS19475;Name=IY40_RS19475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS19475;old_locus_tag=IY40_19805 NZ_JPQY01000032.1 Protein Homology CDS 1495 3264 . - 0 ID=cds-WP_043142705.1;Parent=gene-IY40_RS19475;Dbxref=GenBank:WP_043142705.1;Name=WP_043142705.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004716291.1;locus_tag=IY40_RS19475;product=ABCB family ABC transporter ATP-binding protein/permease;protein_id=WP_043142705.1;transl_table=11 NZ_JPQY01000032.1 RefSeq gene 3446 4303 . + . ID=gene-IY40_RS19480;Name=IY40_RS19480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS19480;old_locus_tag=IY40_19815 NZ_JPQY01000032.1 Protein Homology CDS 3446 4303 . + 0 ID=cds-WP_043142553.1;Parent=gene-IY40_RS19480;Dbxref=GenBank:WP_043142553.1;Name=WP_043142553.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004931728.1;locus_tag=IY40_RS19480;product=AraC family transcriptional regulator;protein_id=WP_043142553.1;transl_table=11 NZ_JPQY01000032.1 RefSeq gene 4338 5087 . - . ID=gene-IY40_RS19485;Name=actS;gbkey=Gene;gene=actS;gene_biotype=protein_coding;locus_tag=IY40_RS19485;old_locus_tag=IY40_19820 NZ_JPQY01000032.1 Protein Homology CDS 4338 5087 . - 0 ID=cds-WP_043142556.1;Parent=gene-IY40_RS19485;Dbxref=GenBank:WP_043142556.1;Name=WP_043142556.1;gbkey=CDS;gene=actS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013814344.1;locus_tag=IY40_RS19485;product=amidase activator ActS;protein_id=WP_043142556.1;transl_table=11 NZ_JPQY01000032.1 RefSeq gene 5276 5905 . - . ID=gene-IY40_RS19490;Name=ycaC;gbkey=Gene;gene=ycaC;gene_biotype=protein_coding;locus_tag=IY40_RS19490;old_locus_tag=IY40_19825 NZ_JPQY01000032.1 Protein Homology CDS 5276 5905 . - 0 ID=cds-WP_025304103.1;Parent=gene-IY40_RS19490;Dbxref=GenBank:WP_025304103.1;Name=WP_025304103.1;Ontology_term=GO:0016787;gbkey=CDS;gene=ycaC;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016929953.1;locus_tag=IY40_RS19490;product=isochorismate family cysteine hydrolase YcaC;protein_id=WP_025304103.1;transl_table=11 NZ_JPQY01000032.1 RefSeq gene 6095 6961 . + . ID=gene-IY40_RS19495;Name=IY40_RS19495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS19495;old_locus_tag=IY40_19830 NZ_JPQY01000032.1 Protein Homology CDS 6095 6961 . + 0 ID=cds-WP_161781787.1;Parent=gene-IY40_RS19495;Dbxref=GenBank:WP_161781787.1;Name=WP_161781787.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015431.6;locus_tag=IY40_RS19495;product=LysR substrate-binding domain-containing protein;protein_id=WP_161781787.1;transl_table=11 NZ_JPQY01000032.1 RefSeq gene 7089 7658 . + . ID=gene-IY40_RS19500;Name=IY40_RS19500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS19500;old_locus_tag=IY40_19835 NZ_JPQY01000032.1 Protein Homology CDS 7089 7658 . + 0 ID=cds-WP_043142563.1;Parent=gene-IY40_RS19500;Dbxref=GenBank:WP_043142563.1;Name=WP_043142563.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004931723.1;locus_tag=IY40_RS19500;product=HdeD family acid-resistance protein;protein_id=WP_043142563.1;transl_table=11 NZ_JPQY01000032.1 RefSeq gene 7794 8132 . + . ID=gene-IY40_RS19505;Name=IY40_RS19505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS19505;old_locus_tag=IY40_19840 NZ_JPQY01000032.1 Protein Homology CDS 7794 8132 . + 0 ID=cds-WP_025304105.1;Parent=gene-IY40_RS19505;Dbxref=GenBank:WP_025304105.1;Name=WP_025304105.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015378954.1;locus_tag=IY40_RS19505;product=hypothetical protein;protein_id=WP_025304105.1;transl_table=11 NZ_JPQY01000032.1 RefSeq gene 8306 8914 . - . ID=gene-IY40_RS19510;Name=IY40_RS19510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS19510;old_locus_tag=IY40_19845 NZ_JPQY01000032.1 Protein Homology CDS 8306 8914 . - 0 ID=cds-WP_043142565.1;Parent=gene-IY40_RS19510;Dbxref=GenBank:WP_043142565.1;Name=WP_043142565.1;Ontology_term=GO:0015288,GO:0042834,GO:0009279,GO:0016020;gbkey=CDS;go_component=cell outer membrane|0009279||IEA,membrane|0016020||IEA;go_function=porin activity|0015288||IEA,peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015378955.1;locus_tag=IY40_RS19510;product=OmpA family protein;protein_id=WP_043142565.1;transl_table=11 NZ_JPQY01000032.1 RefSeq gene 8918 9394 . - . ID=gene-IY40_RS19515;Name=IY40_RS19515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS19515;old_locus_tag=IY40_19850 NZ_JPQY01000032.1 Protein Homology CDS 8918 9394 . - 0 ID=cds-WP_004931717.1;Parent=gene-IY40_RS19515;Dbxref=GenBank:WP_004931717.1;Name=WP_004931717.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015378956.1;locus_tag=IY40_RS19515;product=hypothetical protein;protein_id=WP_004931717.1;transl_table=11 NZ_JPQY01000032.1 RefSeq gene 9784 10398 . + . ID=gene-IY40_RS19520;Name=IY40_RS19520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS19520;old_locus_tag=IY40_19855 NZ_JPQY01000032.1 Protein Homology CDS 9784 10398 . + 0 ID=cds-WP_225735536.1;Parent=gene-IY40_RS19520;Dbxref=GenBank:WP_225735536.1;Name=WP_225735536.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004931716.1;locus_tag=IY40_RS19520;product=2OG-Fe dioxygenase family protein;protein_id=WP_225735536.1;transl_table=11 NZ_JPQY01000032.1 RefSeq gene 10395 11627 . + . ID=gene-IY40_RS19525;Name=IY40_RS19525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS19525;old_locus_tag=IY40_19860 NZ_JPQY01000032.1 Protein Homology CDS 10395 11627 . + 0 ID=cds-WP_043142570.1;Parent=gene-IY40_RS19525;Dbxref=GenBank:WP_043142570.1;Name=WP_043142570.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016929957.1;locus_tag=IY40_RS19525;product=cysteine desulfurase-like protein;protein_id=WP_043142570.1;transl_table=11 NZ_JPQY01000032.1 RefSeq gene 11923 12915 . + . ID=gene-IY40_RS19530;Name=IY40_RS19530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS19530;old_locus_tag=IY40_19865 NZ_JPQY01000032.1 Protein Homology CDS 11923 12915 . + 0 ID=cds-WP_043142708.1;Parent=gene-IY40_RS19530;Dbxref=GenBank:WP_043142708.1;Name=WP_043142708.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210260.1;locus_tag=IY40_RS19530;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_043142708.1;transl_table=11 NZ_JPQY01000032.1 RefSeq gene 13036 14433 . - . ID=gene-IY40_RS19535;Name=IY40_RS19535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS19535;old_locus_tag=IY40_19870 NZ_JPQY01000032.1 Protein Homology CDS 13036 14433 . - 0 ID=cds-WP_043142573.1;Parent=gene-IY40_RS19535;Dbxref=GenBank:WP_043142573.1;Name=WP_043142573.1;Ontology_term=GO:0009055,GO:0020037,GO:0046872;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004931710.1;locus_tag=IY40_RS19535;product=c-type cytochrome;protein_id=WP_043142573.1;transl_table=11 NZ_JPQY01000032.1 RefSeq gene 14430 16082 . - . ID=gene-IY40_RS19540;Name=IY40_RS19540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS19540;old_locus_tag=IY40_19875 NZ_JPQY01000032.1 Protein Homology CDS 14430 16082 . - 0 ID=cds-WP_025304112.1;Parent=gene-IY40_RS19540;Dbxref=GenBank:WP_025304112.1;Name=WP_025304112.1;Ontology_term=GO:0016491,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019455672.1;locus_tag=IY40_RS19540;product=GMC family oxidoreductase;protein_id=WP_025304112.1;transl_table=11 NZ_JPQY01000032.1 RefSeq gene 16079 16666 . - . ID=gene-IY40_RS19545;Name=IY40_RS19545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS19545;old_locus_tag=IY40_19880 NZ_JPQY01000032.1 Protein Homology CDS 16079 16666 . - 0 ID=cds-WP_043142578.1;Parent=gene-IY40_RS19545;Dbxref=GenBank:WP_043142578.1;Name=WP_043142578.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016929961.1;locus_tag=IY40_RS19545;product=sugar dehydrogenase complex small subunit;protein_id=WP_043142578.1;transl_table=11 NZ_JPQY01000032.1 RefSeq gene 17043 17513 . - . ID=gene-IY40_RS19550;Name=IY40_RS19550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS19550;old_locus_tag=IY40_19885 NZ_JPQY01000032.1 Protein Homology CDS 17043 17513 . - 0 ID=cds-WP_043142582.1;Parent=gene-IY40_RS19550;Dbxref=GenBank:WP_043142582.1;Name=WP_043142582.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016929962.1;locus_tag=IY40_RS19550;product=YhcH/YjgK/YiaL family protein;protein_id=WP_043142582.1;transl_table=11 NZ_JPQY01000032.1 RefSeq gene 18087 19037 . + . ID=gene-IY40_RS19555;Name=IY40_RS19555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS19555;old_locus_tag=IY40_19890 NZ_JPQY01000032.1 Protein Homology CDS 18087 19037 . + 0 ID=cds-WP_043142586.1;Parent=gene-IY40_RS19555;Dbxref=GenBank:WP_043142586.1;Name=WP_043142586.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004931702.1;locus_tag=IY40_RS19555;product=2-hydroxyacid dehydrogenase;protein_id=WP_043142586.1;transl_table=11 NZ_JPQY01000032.1 RefSeq gene 19125 20435 . + . ID=gene-IY40_RS19560;Name=IY40_RS19560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS19560;old_locus_tag=IY40_19895 NZ_JPQY01000032.1 Protein Homology CDS 19125 20435 . + 0 ID=cds-WP_043142589.1;Parent=gene-IY40_RS19560;Dbxref=GenBank:WP_043142589.1;Name=WP_043142589.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004931699.1;locus_tag=IY40_RS19560;product=MFS transporter;protein_id=WP_043142589.1;transl_table=11 NZ_JPQY01000032.1 RefSeq gene 20638 20711 . - . ID=gene-IY40_RS19565;Name=IY40_RS19565;gbkey=Gene;gene_biotype=tRNA;locus_tag=IY40_RS19565;old_locus_tag=IY40_19900 NZ_JPQY01000032.1 tRNAscan-SE tRNA 20638 20711 . - . ID=rna-IY40_RS19565;Parent=gene-IY40_RS19565;anticodon=(pos:complement(20677..20679));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=IY40_RS19565;product=tRNA-Gly NZ_JPQY01000032.1 tRNAscan-SE exon 20638 20711 . - . ID=exon-IY40_RS19565-1;Parent=rna-IY40_RS19565;anticodon=(pos:complement(20677..20679));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=IY40_RS19565;product=tRNA-Gly NZ_JPQY01000032.1 RefSeq gene 20859 22376 . - . ID=gene-IY40_RS19570;Name=lysS;gbkey=Gene;gene=lysS;gene_biotype=protein_coding;locus_tag=IY40_RS19570;old_locus_tag=IY40_19905 NZ_JPQY01000032.1 Protein Homology CDS 20859 22376 . - 0 ID=cds-WP_043142592.1;Parent=gene-IY40_RS19570;Dbxref=GenBank:WP_043142592.1;Name=WP_043142592.1;Ontology_term=GO:0006430,GO:0004824,GO:0005524,GO:0005737;gbkey=CDS;gene=lysS;go_component=cytoplasm|0005737||IEA;go_function=lysine-tRNA ligase activity|0004824||IEA,ATP binding|0005524||IEA;go_process=lysyl-tRNA aminoacylation|0006430||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228686.1;locus_tag=IY40_RS19570;product=lysine--tRNA ligase;protein_id=WP_043142592.1;transl_table=11 NZ_JPQY01000032.1 RefSeq gene 22386 23484 . - . ID=gene-IY40_RS19575;Name=prfB;gbkey=Gene;gene=prfB;gene_biotype=protein_coding;locus_tag=IY40_RS19575;old_locus_tag=IY40_19910 NZ_JPQY01000032.1 Protein Homology CDS 23410 23484 . - 0 ID=cds-WP_096242572.1;Parent=gene-IY40_RS19575;Dbxref=GenBank:WP_096242572.1;Name=WP_096242572.1;Note=programmed frameshift;Ontology_term=GO:0006415,GO:0016149,GO:0005737;exception=ribosomal slippage;gbkey=CDS;gene=prfB;go_component=cytoplasm|0005737||IEA;go_function=translation release factor activity%2C codon specific|0016149||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311790.1;locus_tag=IY40_RS19575;product=peptide chain release factor 2;protein_id=WP_096242572.1;transl_table=11 NZ_JPQY01000032.1 Protein Homology CDS 22386 23408 . - 0 ID=cds-WP_096242572.1;Parent=gene-IY40_RS19575;Dbxref=GenBank:WP_096242572.1;Name=WP_096242572.1;Note=programmed frameshift;Ontology_term=GO:0006415,GO:0016149,GO:0005737;exception=ribosomal slippage;gbkey=CDS;gene=prfB;go_component=cytoplasm|0005737||IEA;go_function=translation release factor activity%2C codon specific|0016149||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311790.1;locus_tag=IY40_RS19575;product=peptide chain release factor 2;protein_id=WP_096242572.1;transl_table=11 NZ_JPQY01000032.1 RefSeq pseudogene 23746 24132 . + . ID=gene-IY40_RS25785;Name=IY40_RS25785;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IY40_RS25785;old_locus_tag=IY40_19920;pseudo=true NZ_JPQY01000032.1 Protein Homology CDS 23746 24132 . + 0 ID=cds-IY40_RS25785;Parent=gene-IY40_RS25785;Note=internal stop;Ontology_term=GO:0004519,GO:0090729,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=endonuclease activity|0004519||IEA,toxin activity|0090729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_301479988.1;locus_tag=IY40_RS25785;product=type II toxin-antitoxin system RelE/ParE family toxin;pseudo=true;transl_table=11 NZ_JPQY01000032.1 RefSeq gene 24125 24469 . + . ID=gene-IY40_RS19585;Name=IY40_RS19585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS19585;old_locus_tag=IY40_19925 NZ_JPQY01000032.1 Protein Homology CDS 24125 24469 . + 0 ID=cds-WP_025304117.1;Parent=gene-IY40_RS19585;Dbxref=GenBank:WP_025304117.1;Name=WP_025304117.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: protein motif:HMM:NF024949.6;locus_tag=IY40_RS19585;product=helix-turn-helix domain-containing protein;protein_id=WP_025304117.1;transl_table=11 NZ_JPQY01000032.1 RefSeq gene 24520 26253 . - . ID=gene-IY40_RS19590;Name=recJ;gbkey=Gene;gene=recJ;gene_biotype=protein_coding;locus_tag=IY40_RS19590;old_locus_tag=IY40_19930 NZ_JPQY01000032.1 Protein Homology CDS 24520 26253 . - 0 ID=cds-WP_016929971.1;Parent=gene-IY40_RS19590;Dbxref=GenBank:WP_016929971.1;Name=WP_016929971.1;Ontology_term=GO:0006281,GO:0006310,GO:0008409;gbkey=CDS;gene=recJ;go_function=5'-3' exonuclease activity|0008409||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004931690.1;locus_tag=IY40_RS19590;product=single-stranded-DNA-specific exonuclease RecJ;protein_id=WP_016929971.1;transl_table=11 NZ_JPQY01000032.1 RefSeq gene 26260 26976 . - . ID=gene-IY40_RS19595;Name=dsbC;gbkey=Gene;gene=dsbC;gene_biotype=protein_coding;locus_tag=IY40_RS19595;old_locus_tag=IY40_19935 NZ_JPQY01000032.1 Protein Homology CDS 26260 26976 . - 0 ID=cds-WP_025304118.1;Parent=gene-IY40_RS19595;Dbxref=GenBank:WP_025304118.1;Name=WP_025304118.1;Ontology_term=GO:0042597;gbkey=CDS;gene=dsbC;go_component=periplasmic space|0042597||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209932.1;locus_tag=IY40_RS19595;product=bifunctional protein-disulfide isomerase/oxidoreductase DsbC;protein_id=WP_025304118.1;transl_table=11 NZ_JPQY01000032.1 RefSeq gene 27003 27923 . - . ID=gene-IY40_RS19600;Name=xerD;gbkey=Gene;gene=xerD;gene_biotype=protein_coding;locus_tag=IY40_RS19600;old_locus_tag=IY40_19940 NZ_JPQY01000032.1 Protein Homology CDS 27003 27923 . - 0 ID=cds-WP_154747450.1;Parent=gene-IY40_RS19600;Dbxref=GenBank:WP_154747450.1;Name=WP_154747450.1;Ontology_term=GO:0006310,GO:0009009;gbkey=CDS;gene=xerD;go_function=site-specific recombinase activity|0009009||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015378967.1;locus_tag=IY40_RS19600;product=site-specific tyrosine recombinase XerD;protein_id=WP_154747450.1;transl_table=11 NZ_JPQY01000032.1 RefSeq gene 28009 28527 . + . ID=gene-IY40_RS19605;Name=fldB;gbkey=Gene;gene=fldB;gene_biotype=protein_coding;locus_tag=IY40_RS19605;old_locus_tag=IY40_19945 NZ_JPQY01000032.1 Protein Homology CDS 28009 28527 . + 0 ID=cds-WP_043142598.1;Parent=gene-IY40_RS19605;Dbxref=GenBank:WP_043142598.1;Name=WP_043142598.1;Ontology_term=GO:0009055,GO:0010181;gbkey=CDS;gene=fldB;go_function=electron transfer activity|0009055||IEA,FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209934.1;locus_tag=IY40_RS19605;product=flavodoxin FldB;protein_id=WP_043142598.1;transl_table=11 NZ_JPQY01000032.1 RefSeq gene 28565 29929 . - . ID=gene-IY40_RS19610;Name=creD;gbkey=Gene;gene=creD;gene_biotype=protein_coding;locus_tag=IY40_RS19610;old_locus_tag=IY40_19950 NZ_JPQY01000032.1 Protein Homology CDS 28565 29929 . - 0 ID=cds-WP_043142602.1;Parent=gene-IY40_RS19610;Dbxref=GenBank:WP_043142602.1;Name=WP_043142602.1;gbkey=CDS;gene=creD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004952415.1;locus_tag=IY40_RS19610;product=cell envelope integrity protein CreD;protein_id=WP_043142602.1;transl_table=11 NZ_JPQY01000032.1 RefSeq gene 30010 31428 . - . ID=gene-IY40_RS19615;Name=creC;gbkey=Gene;gene=creC;gene_biotype=protein_coding;locus_tag=IY40_RS19615;old_locus_tag=IY40_19955 NZ_JPQY01000032.1 Protein Homology CDS 30010 31428 . - 0 ID=cds-WP_043142606.1;Parent=gene-IY40_RS19615;Dbxref=GenBank:WP_043142606.1;Name=WP_043142606.1;Ontology_term=GO:0007165,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=creC;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209936.1;locus_tag=IY40_RS19615;product=two-component system sensor histidine kinase CreC;protein_id=WP_043142606.1;transl_table=11 NZ_JPQY01000032.1 RefSeq gene 31425 32120 . - . ID=gene-IY40_RS19620;Name=creB;gbkey=Gene;gene=creB;gene_biotype=protein_coding;locus_tag=IY40_RS19620;old_locus_tag=IY40_19960 NZ_JPQY01000032.1 Protein Homology CDS 31425 32120 . - 0 ID=cds-WP_025304122.1;Parent=gene-IY40_RS19620;Dbxref=GenBank:WP_025304122.1;Name=WP_025304122.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=creB;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209937.1;locus_tag=IY40_RS19620;product=two-component system response regulator CreB;protein_id=WP_025304122.1;transl_table=11 NZ_JPQY01000032.1 RefSeq gene 32120 32542 . - . ID=gene-IY40_RS19625;Name=IY40_RS19625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS19625;old_locus_tag=IY40_19965 NZ_JPQY01000032.1 Protein Homology CDS 32120 32542 . - 0 ID=cds-WP_025304123.1;Parent=gene-IY40_RS19625;Dbxref=GenBank:WP_025304123.1;Name=WP_025304123.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004952425.1;locus_tag=IY40_RS19625;product=protein YgfX;protein_id=WP_025304123.1;transl_table=11 NZ_JPQY01000032.1 RefSeq gene 32523 32789 . - . ID=gene-IY40_RS19630;Name=sdhE;gbkey=Gene;gene=sdhE;gene_biotype=protein_coding;locus_tag=IY40_RS19630;old_locus_tag=IY40_19970 NZ_JPQY01000032.1 Protein Homology CDS 32523 32789 . - 0 ID=cds-WP_004931679.1;Parent=gene-IY40_RS19630;Dbxref=GenBank:WP_004931679.1;Name=WP_004931679.1;gbkey=CDS;gene=sdhE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000354044.1;locus_tag=IY40_RS19630;product=FAD assembly factor SdhE;protein_id=WP_004931679.1;transl_table=11 NZ_JPQY01000032.1 RefSeq gene 33110 34102 . + . ID=gene-IY40_RS19635;Name=ygfZ;gbkey=Gene;gene=ygfZ;gene_biotype=protein_coding;locus_tag=IY40_RS19635;old_locus_tag=IY40_19975 NZ_JPQY01000032.1 Protein Homology CDS 33110 34102 . + 0 ID=cds-WP_043142609.1;Parent=gene-IY40_RS19635;Dbxref=GenBank:WP_043142609.1;Name=WP_043142609.1;Ontology_term=GO:0009451,GO:0005542;gbkey=CDS;gene=ygfZ;go_function=folic acid binding|0005542||IEA;go_process=RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012146601.1;locus_tag=IY40_RS19635;product=tRNA-modifying protein YgfZ;protein_id=WP_043142609.1;transl_table=11 NZ_JPQY01000032.1 RefSeq gene 34141 34638 . - . ID=gene-IY40_RS19640;Name=IY40_RS19640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS19640;old_locus_tag=IY40_19980 NZ_JPQY01000032.1 Protein Homology CDS 34141 34638 . - 0 ID=cds-WP_025304125.1;Parent=gene-IY40_RS19640;Dbxref=GenBank:WP_025304125.1;Name=WP_025304125.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209941.1;locus_tag=IY40_RS19640;product=DUF2165 family protein;protein_id=WP_025304125.1;transl_table=11 NZ_JPQY01000032.1 RefSeq gene 34789 35463 . - . ID=gene-IY40_RS19645;Name=trhA;gbkey=Gene;gene=trhA;gene_biotype=protein_coding;locus_tag=IY40_RS19645;old_locus_tag=IY40_19985 NZ_JPQY01000032.1 Protein Homology CDS 34789 35463 . - 0 ID=cds-WP_033639467.1;Parent=gene-IY40_RS19645;Dbxref=GenBank:WP_033639467.1;Name=WP_033639467.1;Ontology_term=GO:0019835;gbkey=CDS;gene=trhA;go_process=cytolysis|0019835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015378970.1;locus_tag=IY40_RS19645;product=PAQR family membrane homeostasis protein TrhA;protein_id=WP_033639467.1;transl_table=11 NZ_JPQY01000032.1 RefSeq gene 35647 36255 . + . ID=gene-IY40_RS19650;Name=IY40_RS19650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS19650;old_locus_tag=IY40_19990 NZ_JPQY01000032.1 Protein Homology CDS 35647 36255 . + 0 ID=cds-WP_025304127.1;Parent=gene-IY40_RS19650;Dbxref=GenBank:WP_025304127.1;Name=WP_025304127.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004952444.1;locus_tag=IY40_RS19650;product=HD domain-containing protein;protein_id=WP_025304127.1;transl_table=11 NZ_JPQY01000032.1 RefSeq gene 36295 37221 . - . ID=gene-IY40_RS19655;Name=rbsK;gbkey=Gene;gene=rbsK;gene_biotype=protein_coding;locus_tag=IY40_RS19655;old_locus_tag=IY40_19995 NZ_JPQY01000032.1 Protein Homology CDS 36295 37221 . - 0 ID=cds-WP_025304128.1;Parent=gene-IY40_RS19655;Dbxref=GenBank:WP_025304128.1;Name=WP_025304128.1;Ontology_term=GO:0006014,GO:0004747;gbkey=CDS;gene=rbsK;go_function=ribokinase activity|0004747||IEA;go_process=D-ribose metabolic process|0006014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015378971.1;locus_tag=IY40_RS19655;product=ribokinase;protein_id=WP_025304128.1;transl_table=11 NZ_JPQY01000032.1 RefSeq gene 37218 38126 . - . ID=gene-IY40_RS19660;Name=alsK;gbkey=Gene;gene=alsK;gene_biotype=protein_coding;locus_tag=IY40_RS19660;old_locus_tag=IY40_20000 NZ_JPQY01000032.1 Protein Homology CDS 37218 38126 . - 0 ID=cds-WP_043142612.1;Parent=gene-IY40_RS19660;Dbxref=GenBank:WP_043142612.1;Name=WP_043142612.1;Ontology_term=GO:0019316,GO:0019200;gbkey=CDS;gene=alsK;go_function=carbohydrate kinase activity|0019200||IEA;go_process=D-allose catabolic process|0019316||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019455652.1;locus_tag=IY40_RS19660;product=allose kinase;protein_id=WP_043142612.1;transl_table=11 NZ_JPQY01000032.1 RefSeq gene 38137 38808 . - . ID=gene-IY40_RS19665;Name=alsE;gbkey=Gene;gene=alsE;gene_biotype=protein_coding;locus_tag=IY40_RS19665;old_locus_tag=IY40_20005 NZ_JPQY01000032.1 Protein Homology CDS 38137 38808 . - 0 ID=cds-WP_025304130.1;Parent=gene-IY40_RS19665;Dbxref=GenBank:WP_025304130.1;Name=WP_025304130.1;gbkey=CDS;gene=alsE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004931664.1;locus_tag=IY40_RS19665;product=D-allulose 6-phosphate 3-epimerase;protein_id=WP_025304130.1;transl_table=11 NZ_JPQY01000032.1 RefSeq gene 38840 39874 . - . ID=gene-IY40_RS19670;Name=IY40_RS19670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS19670;old_locus_tag=IY40_20010 NZ_JPQY01000032.1 Protein Homology CDS 38840 39874 . - 0 ID=cds-WP_025304131.1;Parent=gene-IY40_RS19670;Dbxref=GenBank:WP_025304131.1;Name=WP_025304131.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019455650.1;locus_tag=IY40_RS19670;product=ABC transporter permease;protein_id=WP_025304131.1;transl_table=11 NZ_JPQY01000032.1 RefSeq gene 39885 40871 . - . ID=gene-IY40_RS19675;Name=IY40_RS19675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS19675;old_locus_tag=IY40_20015 NZ_JPQY01000032.1 Protein Homology CDS 39885 40871 . - 0 ID=cds-WP_043142614.1;Parent=gene-IY40_RS19675;Dbxref=GenBank:WP_043142614.1;Name=WP_043142614.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004931660.1;locus_tag=IY40_RS19675;product=ABC transporter permease;protein_id=WP_043142614.1;transl_table=11 NZ_JPQY01000032.1 RefSeq gene 40864 42381 . - . ID=gene-IY40_RS19680;Name=IY40_RS19680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS19680;old_locus_tag=IY40_20020 NZ_JPQY01000032.1 Protein Homology CDS 40864 42381 . - 0 ID=cds-WP_043142616.1;Parent=gene-IY40_RS19680;Dbxref=GenBank:WP_043142616.1;Name=WP_043142616.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015378976.1;locus_tag=IY40_RS19680;product=sugar ABC transporter ATP-binding protein;protein_id=WP_043142616.1;transl_table=11 NZ_JPQY01000032.1 RefSeq gene 42384 43367 . - . ID=gene-IY40_RS19685;Name=IY40_RS19685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS19685;old_locus_tag=IY40_20025 NZ_JPQY01000032.1 Protein Homology CDS 42384 43367 . - 0 ID=cds-WP_025304134.1;Parent=gene-IY40_RS19685;Dbxref=GenBank:WP_025304134.1;Name=WP_025304134.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015378977.1;locus_tag=IY40_RS19685;product=substrate-binding domain-containing protein;protein_id=WP_025304134.1;transl_table=11 NZ_JPQY01000032.1 RefSeq gene 43416 44234 . - . ID=gene-IY40_RS19690;Name=IY40_RS19690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS19690;old_locus_tag=IY40_20030 NZ_JPQY01000032.1 Protein Homology CDS 43416 44234 . - 0 ID=cds-WP_043142619.1;Parent=gene-IY40_RS19690;Dbxref=GenBank:WP_043142619.1;Name=WP_043142619.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016929989.1;locus_tag=IY40_RS19690;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_043142619.1;transl_table=11 NZ_JPQY01000032.1 RefSeq gene 44546 45871 . - . ID=gene-IY40_RS19695;Name=IY40_RS19695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS19695;old_locus_tag=IY40_20035 NZ_JPQY01000032.1 Protein Homology CDS 44546 45871 . - 0 ID=cds-WP_043142622.1;Parent=gene-IY40_RS19695;Dbxref=GenBank:WP_043142622.1;Name=WP_043142622.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009637928.1;locus_tag=IY40_RS19695;product=MFS transporter;protein_id=WP_043142622.1;transl_table=11 NZ_JPQY01000032.1 RefSeq gene 45868 46521 . - . ID=gene-IY40_RS19700;Name=IY40_RS19700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS19700;old_locus_tag=IY40_20040 NZ_JPQY01000032.1 Protein Homology CDS 45868 46521 . - 0 ID=cds-WP_043142626.1;Parent=gene-IY40_RS19700;Dbxref=GenBank:WP_043142626.1;Name=WP_043142626.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004952452.1;locus_tag=IY40_RS19700;product=DUF4286 family protein;protein_id=WP_043142626.1;transl_table=11 NZ_JPQY01000032.1 RefSeq gene 46571 47917 . - . ID=gene-IY40_RS19705;Name=IY40_RS19705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS19705;old_locus_tag=IY40_20045 NZ_JPQY01000032.1 Protein Homology CDS 46571 47917 . - 0 ID=cds-WP_043142628.1;Parent=gene-IY40_RS19705;Dbxref=GenBank:WP_043142628.1;Name=WP_043142628.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006327737.1;locus_tag=IY40_RS19705;product=amidase;protein_id=WP_043142628.1;transl_table=11 NZ_JPQY01000032.1 RefSeq gene 47917 48630 . - . ID=gene-IY40_RS19710;Name=IY40_RS19710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS19710;old_locus_tag=IY40_20050 NZ_JPQY01000032.1 Protein Homology CDS 47917 48630 . - 0 ID=cds-WP_043142631.1;Parent=gene-IY40_RS19710;Dbxref=GenBank:WP_043142631.1;Name=WP_043142631.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004952457.1;locus_tag=IY40_RS19710;product=DUF2848 domain-containing protein;protein_id=WP_043142631.1;transl_table=11 NZ_JPQY01000032.1 RefSeq gene 48793 49437 . + . ID=gene-IY40_RS19715;Name=IY40_RS19715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS19715;old_locus_tag=IY40_20055 NZ_JPQY01000032.1 Protein Homology CDS 48793 49437 . + 0 ID=cds-WP_169540627.1;Parent=gene-IY40_RS19715;Dbxref=GenBank:WP_169540627.1;Name=WP_169540627.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016929994.1;locus_tag=IY40_RS19715;product=GntR family transcriptional regulator;protein_id=WP_169540627.1;transl_table=11 NZ_JPQY01000032.1 RefSeq gene 49662 49979 . - . ID=gene-IY40_RS19720;Name=IY40_RS19720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS19720;old_locus_tag=IY40_20060 NZ_JPQY01000032.1 Protein Homology CDS 49662 49979 . - 0 ID=cds-WP_025304141.1;Parent=gene-IY40_RS19720;Dbxref=GenBank:WP_025304141.1;Name=WP_025304141.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004931651.1;locus_tag=IY40_RS19720;product=BrnA antitoxin family protein;protein_id=WP_025304141.1;transl_table=11 NZ_JPQY01000032.1 RefSeq gene 49942 50265 . - . ID=gene-IY40_RS25455;Name=IY40_RS25455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS25455 NZ_JPQY01000032.1 Protein Homology CDS 49942 50265 . - 0 ID=cds-WP_071845113.1;Parent=gene-IY40_RS25455;Dbxref=GenBank:WP_071845113.1;Name=WP_071845113.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015378978.1;locus_tag=IY40_RS25455;product=BrnT family toxin;protein_id=WP_071845113.1;transl_table=11 NZ_JPQY01000032.1 RefSeq gene 50343 51089 . - . ID=gene-IY40_RS19730;Name=IY40_RS19730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS19730;old_locus_tag=IY40_20070 NZ_JPQY01000032.1 Protein Homology CDS 50343 51089 . - 0 ID=cds-WP_025304143.1;Parent=gene-IY40_RS19730;Dbxref=GenBank:WP_025304143.1;Name=WP_025304143.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004952462.1;locus_tag=IY40_RS19730;product=SDR family oxidoreductase;protein_id=WP_025304143.1;transl_table=11 NZ_JPQY01000032.1 RefSeq gene 51186 51419 . - . ID=gene-IY40_RS19735;Name=IY40_RS19735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS19735;old_locus_tag=IY40_20075 NZ_JPQY01000032.1 Protein Homology CDS 51186 51419 . - 0 ID=cds-WP_025304144.1;Parent=gene-IY40_RS19735;Dbxref=GenBank:WP_025304144.1;Name=WP_025304144.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004931645.1;locus_tag=IY40_RS19735;product=hypothetical protein;protein_id=WP_025304144.1;transl_table=11 NZ_JPQY01000032.1 RefSeq gene 51609 52268 . + . ID=gene-IY40_RS19740;Name=IY40_RS19740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS19740;old_locus_tag=IY40_20080 NZ_JPQY01000032.1 Protein Homology CDS 51609 52268 . + 0 ID=cds-WP_025304145.1;Parent=gene-IY40_RS19740;Dbxref=GenBank:WP_025304145.1;Name=WP_025304145.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004931642.1;locus_tag=IY40_RS19740;product=response regulator;protein_id=WP_025304145.1;transl_table=11 NZ_JPQY01000032.1 RefSeq gene 52273 53679 . + . ID=gene-IY40_RS19745;Name=IY40_RS19745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS19745;old_locus_tag=IY40_20085 NZ_JPQY01000032.1 Protein Homology CDS 52273 53679 . + 0 ID=cds-WP_043142639.1;Parent=gene-IY40_RS19745;Dbxref=GenBank:WP_043142639.1;Name=WP_043142639.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012146613.1;locus_tag=IY40_RS19745;product=ATP-binding protein;protein_id=WP_043142639.1;transl_table=11 NZ_JPQY01000032.1 RefSeq gene 53691 54218 . + . ID=gene-IY40_RS19750;Name=IY40_RS19750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS19750;old_locus_tag=IY40_20090 NZ_JPQY01000032.1 Protein Homology CDS 53691 54218 . + 0 ID=cds-WP_025304147.1;Parent=gene-IY40_RS19750;Dbxref=GenBank:WP_025304147.1;Name=WP_025304147.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004931638.1;locus_tag=IY40_RS19750;product=GNAT family N-acetyltransferase;protein_id=WP_025304147.1;transl_table=11 NZ_JPQY01000032.1 RefSeq gene 54228 55193 . - . ID=gene-IY40_RS19755;Name=IY40_RS19755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS19755;old_locus_tag=IY40_20095 NZ_JPQY01000032.1 Protein Homology CDS 54228 55193 . - 0 ID=cds-WP_043142642.1;Parent=gene-IY40_RS19755;Dbxref=GenBank:WP_043142642.1;Name=WP_043142642.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013814394.1;locus_tag=IY40_RS19755;product=quinone oxidoreductase family protein;protein_id=WP_043142642.1;transl_table=11 NZ_JPQY01000032.1 RefSeq gene 55302 58181 . - . ID=gene-IY40_RS19760;Name=gcvP;gbkey=Gene;gene=gcvP;gene_biotype=protein_coding;locus_tag=IY40_RS19760;old_locus_tag=IY40_20100 NZ_JPQY01000032.1 Protein Homology CDS 55302 58181 . - 0 ID=cds-WP_043142647.1;Parent=gene-IY40_RS19760;Dbxref=GenBank:WP_043142647.1;Name=WP_043142647.1;Ontology_term=GO:0019464,GO:0004375;gbkey=CDS;gene=gcvP;go_function=glycine dehydrogenase (decarboxylating) activity|0004375||IEA;go_process=glycine decarboxylation via glycine cleavage system|0019464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019455636.1;locus_tag=IY40_RS19760;product=aminomethyl-transferring glycine dehydrogenase;protein_id=WP_043142647.1;transl_table=11 NZ_JPQY01000032.1 RefSeq gene 58274 58660 . - . ID=gene-IY40_RS19765;Name=gcvH;gbkey=Gene;gene=gcvH;gene_biotype=protein_coding;locus_tag=IY40_RS19765;old_locus_tag=IY40_20105 NZ_JPQY01000032.1 Protein Homology CDS 58274 58660 . - 0 ID=cds-WP_043142653.1;Parent=gene-IY40_RS19765;Dbxref=GenBank:WP_043142653.1;Name=WP_043142653.1;Ontology_term=GO:0019464,GO:0005960;gbkey=CDS;gene=gcvH;go_component=glycine cleavage complex|0005960||IEA;go_process=glycine decarboxylation via glycine cleavage system|0019464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209948.1;locus_tag=IY40_RS19765;product=glycine cleavage system protein GcvH;protein_id=WP_043142653.1;transl_table=11 NZ_JPQY01000032.1 RefSeq gene 58707 59804 . - . ID=gene-IY40_RS19770;Name=gcvT;gbkey=Gene;gene=gcvT;gene_biotype=protein_coding;locus_tag=IY40_RS19770;old_locus_tag=IY40_20110 NZ_JPQY01000032.1 Protein Homology CDS 58707 59804 . - 0 ID=cds-WP_004931631.1;Parent=gene-IY40_RS19770;Dbxref=GenBank:WP_004931631.1;Name=WP_004931631.1;Ontology_term=GO:0019464,GO:0004047,GO:0005737;gbkey=CDS;gene=gcvT;go_component=cytoplasm|0005737||IEA;go_function=aminomethyltransferase activity|0004047||IEA;go_process=glycine decarboxylation via glycine cleavage system|0019464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004931631.1;locus_tag=IY40_RS19770;product=glycine cleavage system aminomethyltransferase GcvT;protein_id=WP_004931631.1;transl_table=11 NZ_JPQY01000032.1 RefSeq gene 60311 61513 . - . ID=gene-IY40_RS19775;Name=ubiI;gbkey=Gene;gene=ubiI;gene_biotype=protein_coding;gene_synonym=visC;locus_tag=IY40_RS19775;old_locus_tag=IY40_20115 NZ_JPQY01000032.1 Protein Homology CDS 60311 61513 . - 0 ID=cds-WP_043142656.1;Parent=gene-IY40_RS19775;Dbxref=GenBank:WP_043142656.1;Name=WP_043142656.1;Ontology_term=GO:0006744,GO:0016709,GO:0071949;gbkey=CDS;gene=ubiI;go_function=oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C NAD(P)H as one donor%2C and incorporation of one atom of oxygen|0016709||IEA,FAD binding|0071949||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004931629.1;locus_tag=IY40_RS19775;product=FAD-dependent 2-octaprenylphenol hydroxylase;protein_id=WP_043142656.1;transl_table=11 NZ_JPQY01000032.1 RefSeq gene 61592 62770 . - . ID=gene-IY40_RS19780;Name=ubiH;gbkey=Gene;gene=ubiH;gene_biotype=protein_coding;gene_synonym=visB;locus_tag=IY40_RS19780;old_locus_tag=IY40_20120 NZ_JPQY01000032.1 Protein Homology CDS 61592 62770 . - 0 ID=cds-WP_043142660.1;Parent=gene-IY40_RS19780;Dbxref=GenBank:WP_043142660.1;Name=WP_043142660.1;Ontology_term=GO:0006744,GO:0008681,GO:0016709,GO:0071949;gbkey=CDS;gene=ubiH;go_function=2-octaprenyl-6-methoxyphenol hydroxylase activity|0008681||IEA,oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C NAD(P)H as one donor%2C and incorporation of one atom of oxygen|0016709||IEA,FAD binding|0071949||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209951.1;locus_tag=IY40_RS19780;product=2-octaprenyl-6-methoxyphenyl hydroxylase;protein_id=WP_043142660.1;transl_table=11 NZ_JPQY01000032.1 RefSeq gene 62772 64088 . - . ID=gene-IY40_RS19785;Name=pepP;gbkey=Gene;gene=pepP;gene_biotype=protein_coding;locus_tag=IY40_RS19785;old_locus_tag=IY40_20125 NZ_JPQY01000032.1 Protein Homology CDS 62772 64088 . - 0 ID=cds-WP_025304153.1;Parent=gene-IY40_RS19785;Dbxref=GenBank:WP_025304153.1;Name=WP_025304153.1;Ontology_term=GO:0070006;gbkey=CDS;gene=pepP;go_function=metalloaminopeptidase activity|0070006||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016930007.1;locus_tag=IY40_RS19785;product=Xaa-Pro aminopeptidase;protein_id=WP_025304153.1;transl_table=11 NZ_JPQY01000032.1 RefSeq gene 64144 64722 . - . ID=gene-IY40_RS19790;Name=IY40_RS19790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS19790;old_locus_tag=IY40_20130 NZ_JPQY01000032.1 Protein Homology CDS 64144 64722 . - 0 ID=cds-WP_025304154.1;Parent=gene-IY40_RS19790;Dbxref=GenBank:WP_025304154.1;Name=WP_025304154.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209953.1;locus_tag=IY40_RS19790;product=YecA/YgfB family protein;protein_id=WP_025304154.1;transl_table=11 NZ_JPQY01000032.1 RefSeq gene 65042 65371 . + . ID=gene-IY40_RS19795;Name=zapA;gbkey=Gene;gene=zapA;gene_biotype=protein_coding;locus_tag=IY40_RS19795;old_locus_tag=IY40_20135 NZ_JPQY01000032.1 Protein Homology CDS 65042 65371 . + 0 ID=cds-WP_004931621.1;Parent=gene-IY40_RS19795;Dbxref=GenBank:WP_004931621.1;Name=WP_004931621.1;gbkey=CDS;gene=zapA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005971092.1;locus_tag=IY40_RS19795;product=cell division protein ZapA;protein_id=WP_004931621.1;transl_table=11 NZ_JPQY01000032.1 RefSeq gene 65412 65594 . + . ID=gene-IY40_RS25460;Name=ssrS;gbkey=Gene;gene=ssrS;gene_biotype=ncRNA;locus_tag=IY40_RS25460 NZ_JPQY01000032.1 cmsearch ncRNA 65412 65594 . + . ID=rna-IY40_RS25460;Parent=gene-IY40_RS25460;Dbxref=RFAM:RF00013;gbkey=ncRNA;gene=ssrS;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=IY40_RS25460;product=6S RNA NZ_JPQY01000032.1 cmsearch exon 65412 65594 . + . ID=exon-IY40_RS25460-1;Parent=rna-IY40_RS25460;Dbxref=RFAM:RF00013;gbkey=ncRNA;gene=ssrS;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=IY40_RS25460;product=6S RNA NZ_JPQY01000032.1 RefSeq gene 65647 66255 . + . ID=gene-IY40_RS19800;Name=IY40_RS19800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS19800;old_locus_tag=IY40_20140 NZ_JPQY01000032.1 Protein Homology CDS 65647 66255 . + 0 ID=cds-WP_043142663.1;Parent=gene-IY40_RS19800;Dbxref=GenBank:WP_043142663.1;Name=WP_043142663.1;Ontology_term=GO:0006730,GO:0030272;gbkey=CDS;go_function=5-formyltetrahydrofolate cyclo-ligase activity|0030272||IEA;go_process=one-carbon metabolic process|0006730||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004931619.1;locus_tag=IY40_RS19800;product=5-formyltetrahydrofolate cyclo-ligase;protein_id=WP_043142663.1;transl_table=11 NZ_JPQY01000032.1 RefSeq gene 66303 67541 . - . ID=gene-IY40_RS19805;Name=serA;gbkey=Gene;gene=serA;gene_biotype=protein_coding;locus_tag=IY40_RS19805;old_locus_tag=IY40_20145 NZ_JPQY01000032.1 Protein Homology CDS 66303 67541 . - 0 ID=cds-WP_025304156.1;Parent=gene-IY40_RS19805;Dbxref=GenBank:WP_025304156.1;Name=WP_025304156.1;Ontology_term=GO:0016616,GO:0051287;gbkey=CDS;gene=serA;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228712.1;locus_tag=IY40_RS19805;product=phosphoglycerate dehydrogenase;protein_id=WP_025304156.1;transl_table=11 NZ_JPQY01000032.1 RefSeq gene 67834 68490 . - . ID=gene-IY40_RS19810;Name=rpiA;gbkey=Gene;gene=rpiA;gene_biotype=protein_coding;locus_tag=IY40_RS19810;old_locus_tag=IY40_20150 NZ_JPQY01000032.1 Protein Homology CDS 67834 68490 . - 0 ID=cds-WP_025304157.1;Parent=gene-IY40_RS19810;Dbxref=GenBank:WP_025304157.1;Name=WP_025304157.1;Ontology_term=GO:0009052,GO:0004751;gbkey=CDS;gene=rpiA;go_function=ribose-5-phosphate isomerase activity|0004751||IEA;go_process=pentose-phosphate shunt%2C non-oxidative branch|0009052||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006319487.1;locus_tag=IY40_RS19810;product=ribose-5-phosphate isomerase RpiA;protein_id=WP_025304157.1;transl_table=11 NZ_JPQY01000032.1 RefSeq gene 68695 69588 . + . ID=gene-IY40_RS19815;Name=IY40_RS19815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS19815;old_locus_tag=IY40_20155 NZ_JPQY01000032.1 Protein Homology CDS 68695 69588 . + 0 ID=cds-WP_025304158.1;Parent=gene-IY40_RS19815;Dbxref=GenBank:WP_025304158.1;Name=WP_025304158.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700,GO:0005829;gbkey=CDS;go_component=cytosol|0005829||IEA;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000828351.1;locus_tag=IY40_RS19815;product=LysR family transcriptional regulator ArgP;protein_id=WP_025304158.1;transl_table=11 NZ_JPQY01000032.1 RefSeq gene 69637 70368 . - . ID=gene-IY40_RS19820;Name=IY40_RS19820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS19820;old_locus_tag=IY40_20160 NZ_JPQY01000032.1 Protein Homology CDS 69637 70368 . - 0 ID=cds-WP_025160209.1;Parent=gene-IY40_RS19820;Dbxref=GenBank:WP_025160209.1;Name=WP_025160209.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004931607.1;locus_tag=IY40_RS19820;product=oxidative stress defense protein;protein_id=WP_025160209.1;transl_table=11 NZ_JPQY01000032.1 RefSeq gene 70490 71107 . - . ID=gene-IY40_RS19825;Name=argO;gbkey=Gene;gene=argO;gene_biotype=protein_coding;locus_tag=IY40_RS19825;old_locus_tag=IY40_20165 NZ_JPQY01000032.1 Protein Homology CDS 70490 71107 . - 0 ID=cds-WP_025304159.1;Parent=gene-IY40_RS19825;Dbxref=GenBank:WP_025304159.1;Name=WP_025304159.1;Ontology_term=GO:1903826,GO:0061459,GO:0016020;gbkey=CDS;gene=argO;go_component=membrane|0016020||IEA;go_function=L-arginine transmembrane transporter activity|0061459||IEA;go_process=L-arginine transmembrane transport|1903826||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012146629.1;locus_tag=IY40_RS19825;product=arginine exporter ArgO;protein_id=WP_025304159.1;transl_table=11 NZ_JPQY01000032.1 RefSeq gene 71232 72050 . - . ID=gene-IY40_RS19830;Name=IY40_RS19830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS19830;old_locus_tag=IY40_20170 NZ_JPQY01000032.1 Protein Homology CDS 71232 72050 . - 0 ID=cds-WP_025304160.1;Parent=gene-IY40_RS19830;Dbxref=GenBank:WP_025304160.1;Name=WP_025304160.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016930012.1;locus_tag=IY40_RS19830;product=IclR family transcriptional regulator;protein_id=WP_025304160.1;transl_table=11 NZ_JPQY01000032.1 RefSeq gene 72425 73978 . + . ID=gene-IY40_RS19835;Name=IY40_RS19835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS19835;old_locus_tag=IY40_20175 NZ_JPQY01000032.1 Protein Homology CDS 72425 73978 . + 0 ID=cds-WP_043142665.1;Parent=gene-IY40_RS19835;Dbxref=GenBank:WP_043142665.1;Name=WP_043142665.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013814406.1;locus_tag=IY40_RS19835;product=sugar ABC transporter ATP-binding protein;protein_id=WP_043142665.1;transl_table=11 NZ_JPQY01000032.1 RefSeq gene 73971 75053 . + . ID=gene-IY40_RS19840;Name=IY40_RS19840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS19840;old_locus_tag=IY40_20180 NZ_JPQY01000032.1 Protein Homology CDS 73971 75053 . + 0 ID=cds-WP_016930014.1;Parent=gene-IY40_RS19840;Dbxref=GenBank:WP_016930014.1;Name=WP_016930014.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006319493.1;locus_tag=IY40_RS19840;product=ABC transporter permease;protein_id=WP_016930014.1;transl_table=11 NZ_JPQY01000032.1 RefSeq gene 75068 76168 . + . ID=gene-IY40_RS19845;Name=IY40_RS19845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS19845;old_locus_tag=IY40_20185 NZ_JPQY01000032.1 Protein Homology CDS 75068 76168 . + 0 ID=cds-WP_043142668.1;Parent=gene-IY40_RS19845;Dbxref=GenBank:WP_043142668.1;Name=WP_043142668.1;Ontology_term=GO:0055085,GO:0022857,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=transmembrane transporter activity|0022857||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015841819.1;locus_tag=IY40_RS19845;product=ABC transporter substrate-binding protein;protein_id=WP_043142668.1;transl_table=11 NZ_JPQY01000032.1 RefSeq gene 76165 77040 . + . ID=gene-IY40_RS19850;Name=IY40_RS19850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS19850;old_locus_tag=IY40_20190 NZ_JPQY01000032.1 Protein Homology CDS 76165 77040 . + 0 ID=cds-WP_192839710.1;Parent=gene-IY40_RS19850;Dbxref=GenBank:WP_192839710.1;Name=WP_192839710.1;Ontology_term=GO:0005515,GO:0016787,GO:0046872;gbkey=CDS;go_function=protein binding|0005515||IEA,hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016930016.1;locus_tag=IY40_RS19850;product=SMP-30/gluconolactonase/LRE family protein;protein_id=WP_192839710.1;transl_table=11 NZ_JPQY01000032.1 RefSeq gene 77297 78295 . + . ID=gene-IY40_RS19855;Name=yiaK;gbkey=Gene;gene=yiaK;gene_biotype=protein_coding;locus_tag=IY40_RS19855;old_locus_tag=IY40_20195 NZ_JPQY01000032.1 Protein Homology CDS 77297 78295 . + 0 ID=cds-WP_043142670.1;Parent=gene-IY40_RS19855;Dbxref=GenBank:WP_043142670.1;Name=WP_043142670.1;Ontology_term=GO:0047559,GO:0070403;gbkey=CDS;gene=yiaK;go_function=3-dehydro-L-gulonate 2-dehydrogenase activity|0047559||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013094954.1;locus_tag=IY40_RS19855;product=3-dehydro-L-gulonate 2-dehydrogenase;protein_id=WP_043142670.1;transl_table=11 NZ_JPQY01000032.1 RefSeq gene 78309 78782 . + . ID=gene-IY40_RS19860;Name=IY40_RS19860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS19860;old_locus_tag=IY40_20200 NZ_JPQY01000032.1 Protein Homology CDS 78309 78782 . + 0 ID=cds-WP_025304166.1;Parent=gene-IY40_RS19860;Dbxref=GenBank:WP_025304166.1;Name=WP_025304166.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006319497.1;locus_tag=IY40_RS19860;product=YhcH/YjgK/YiaL family protein;protein_id=WP_025304166.1;transl_table=11 NZ_JPQY01000032.1 RefSeq gene 78905 80200 . + . ID=gene-IY40_RS19865;Name=IY40_RS19865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS19865;old_locus_tag=IY40_20205 NZ_JPQY01000032.1 Protein Homology CDS 78905 80200 . + 0 ID=cds-WP_043142672.1;Parent=gene-IY40_RS19865;Dbxref=GenBank:WP_043142672.1;Name=WP_043142672.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013814412.1;locus_tag=IY40_RS19865;product=MFS transporter;protein_id=WP_043142672.1;transl_table=11 NZ_JPQY01000032.1 RefSeq gene 80200 81690 . + . ID=gene-IY40_RS19870;Name=IY40_RS19870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS19870;old_locus_tag=IY40_20210 NZ_JPQY01000032.1 Protein Homology CDS 80200 81690 . + 0 ID=cds-WP_043142673.1;Parent=gene-IY40_RS19870;Dbxref=GenBank:WP_043142673.1;Name=WP_043142673.1;Ontology_term=GO:0016310,GO:0005524,GO:0019200;gbkey=CDS;go_function=ATP binding|0005524||IEA,carbohydrate kinase activity|0019200||IEA;go_process=phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013814413.1;locus_tag=IY40_RS19870;product=FGGY-family carbohydrate kinase;protein_id=WP_043142673.1;transl_table=11 NZ_JPQY01000032.1 RefSeq gene 81687 82343 . + . ID=gene-IY40_RS19875;Name=ulaD;gbkey=Gene;gene=ulaD;gene_biotype=protein_coding;locus_tag=IY40_RS19875;old_locus_tag=IY40_20215 NZ_JPQY01000032.1 Protein Homology CDS 81687 82343 . + 0 ID=cds-WP_043142675.1;Parent=gene-IY40_RS19875;Dbxref=GenBank:WP_043142675.1;Name=WP_043142675.1;gbkey=CDS;gene=ulaD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006319516.1;locus_tag=IY40_RS19875;product=3-keto-L-gulonate-6-phosphate decarboxylase UlaD;protein_id=WP_043142675.1;transl_table=11 NZ_JPQY01000032.1 RefSeq gene 82345 83205 . + . ID=gene-IY40_RS19880;Name=IY40_RS19880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS19880;old_locus_tag=IY40_20220 NZ_JPQY01000032.1 Protein Homology CDS 82345 83205 . + 0 ID=cds-WP_043142677.1;Parent=gene-IY40_RS19880;Dbxref=GenBank:WP_043142677.1;Name=WP_043142677.1;Ontology_term=GO:0005975,GO:0016861;gbkey=CDS;go_function=intramolecular oxidoreductase activity%2C interconverting aldoses and ketoses|0016861||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004952556.1;locus_tag=IY40_RS19880;product=L-ribulose-5-phosphate 3-epimerase;protein_id=WP_043142677.1;transl_table=11 NZ_JPQY01000032.1 RefSeq gene 83199 83894 . + . ID=gene-IY40_RS19885;Name=araD;gbkey=Gene;gene=araD;gene_biotype=protein_coding;locus_tag=IY40_RS19885;old_locus_tag=IY40_20225 NZ_JPQY01000032.1 Protein Homology CDS 83199 83894 . + 0 ID=cds-WP_043142679.1;Parent=gene-IY40_RS19885;Dbxref=GenBank:WP_043142679.1;Name=WP_043142679.1;Ontology_term=GO:0019568,GO:0008270,GO:0008742;gbkey=CDS;gene=araD;go_function=zinc ion binding|0008270||IEA,L-ribulose-phosphate 4-epimerase activity|0008742||IEA;go_process=arabinose catabolic process|0019568||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010276689.1;locus_tag=IY40_RS19885;product=L-ribulose-5-phosphate 4-epimerase;protein_id=WP_043142679.1;transl_table=11 NZ_JPQY01000032.1 RefSeq gene 84037 84735 . + . ID=gene-IY40_RS19890;Name=IY40_RS19890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS19890;old_locus_tag=IY40_20230 NZ_JPQY01000032.1 Protein Homology CDS 84037 84735 . + 0 ID=cds-WP_043142681.1;Parent=gene-IY40_RS19890;Dbxref=GenBank:WP_043142681.1;Name=WP_043142681.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004952562.1;locus_tag=IY40_RS19890;product=RluA family pseudouridine synthase;protein_id=WP_043142681.1;transl_table=11 NZ_JPQY01000032.1 RefSeq gene 84743 85282 . - . ID=gene-IY40_RS19895;Name=IY40_RS19895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS19895;old_locus_tag=IY40_20235 NZ_JPQY01000032.1 Protein Homology CDS 84743 85282 . - 0 ID=cds-WP_033635867.1;Parent=gene-IY40_RS19895;Dbxref=GenBank:WP_033635867.1;Name=WP_033635867.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227580.1;locus_tag=IY40_RS19895;product=DUF2058 domain-containing protein;protein_id=WP_033635867.1;transl_table=11 NZ_JPQY01000032.1 RefSeq gene 85600 86577 . + . ID=gene-IY40_RS19900;Name=IY40_RS19900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS19900;old_locus_tag=IY40_20245 NZ_JPQY01000032.1 Protein Homology CDS 85600 86577 . + 0 ID=cds-WP_043142684.1;Parent=gene-IY40_RS19900;Dbxref=GenBank:WP_043142684.1;Name=WP_043142684.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016930027.1;locus_tag=IY40_RS19900;product=DUF1852 domain-containing protein;protein_id=WP_043142684.1;transl_table=11 NZ_JPQY01000032.1 RefSeq gene 86603 87634 . + . ID=gene-IY40_RS19905;Name=IY40_RS19905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS19905;old_locus_tag=IY40_20250 NZ_JPQY01000032.1 Protein Homology CDS 86603 87634 . + 0 ID=cds-WP_025304175.1;Parent=gene-IY40_RS19905;Dbxref=GenBank:WP_025304175.1;Name=WP_025304175.1;Ontology_term=GO:0009086,GO:0003871,GO:0008270;gbkey=CDS;go_function=5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity|0003871||IEA,zinc ion binding|0008270||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017347974.1;locus_tag=IY40_RS19905;product=methionine synthase;protein_id=WP_025304175.1;transl_table=11 NZ_JPQY01000032.1 RefSeq gene 87822 89171 . + . ID=gene-IY40_RS19910;Name=IY40_RS19910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS19910;old_locus_tag=IY40_20255 NZ_JPQY01000032.1 Protein Homology CDS 87822 89171 . + 0 ID=cds-WP_043142686.1;Parent=gene-IY40_RS19910;Dbxref=GenBank:WP_043142686.1;Name=WP_043142686.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004931592.1;locus_tag=IY40_RS19910;product=MFS transporter;protein_id=WP_043142686.1;transl_table=11 NZ_JPQY01000032.1 RefSeq gene 89254 90120 . - . ID=gene-IY40_RS19915;Name=mscS;gbkey=Gene;gene=mscS;gene_biotype=protein_coding;locus_tag=IY40_RS19915;old_locus_tag=IY40_20260 NZ_JPQY01000032.1 Protein Homology CDS 89254 90120 . - 0 ID=cds-WP_025304177.1;Parent=gene-IY40_RS19915;Dbxref=GenBank:WP_025304177.1;Name=WP_025304177.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=mscS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017893892.1;locus_tag=IY40_RS19915;product=small-conductance mechanosensitive channel MscS;protein_id=WP_025304177.1;transl_table=11 NZ_JPQY01000032.1 RefSeq gene 90326 90994 . + . ID=gene-IY40_RS19920;Name=IY40_RS19920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS19920;old_locus_tag=IY40_20265 NZ_JPQY01000032.1 Protein Homology CDS 90326 90994 . + 0 ID=cds-WP_025304178.1;Parent=gene-IY40_RS19920;Dbxref=GenBank:WP_025304178.1;Name=WP_025304178.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019455617.1;locus_tag=IY40_RS19920;product=DUF1345 domain-containing protein;protein_id=WP_025304178.1;transl_table=11 NZ_JPQY01000032.1 RefSeq gene 91050 92129 . - . ID=gene-IY40_RS19925;Name=fbaA;gbkey=Gene;gene=fbaA;gene_biotype=protein_coding;locus_tag=IY40_RS19925;old_locus_tag=IY40_20270 NZ_JPQY01000032.1 Protein Homology CDS 91050 92129 . - 0 ID=cds-WP_025304179.1;Parent=gene-IY40_RS19925;Dbxref=GenBank:WP_025304179.1;Name=WP_025304179.1;Ontology_term=GO:0005975,GO:0006096,GO:0004332,GO:0008270;gbkey=CDS;gene=fbaA;go_function=fructose-bisphosphate aldolase activity|0004332||IEA,zinc ion binding|0008270||IEA;go_process=carbohydrate metabolic process|0005975||IEA,glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228720.1;locus_tag=IY40_RS19925;product=class II fructose-bisphosphate aldolase;protein_id=WP_025304179.1;transl_table=11 NZ_JPQY01000032.1 RefSeq gene 92246 93409 . - . ID=gene-IY40_RS19930;Name=pgk;gbkey=Gene;gene=pgk;gene_biotype=protein_coding;locus_tag=IY40_RS19930;old_locus_tag=IY40_20275 NZ_JPQY01000032.1 Protein Homology CDS 92246 93409 . - 0 ID=cds-WP_025160206.1;Parent=gene-IY40_RS19930;Dbxref=GenBank:WP_025160206.1;Name=WP_025160206.1;gbkey=CDS;gene=pgk;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228721.1;locus_tag=IY40_RS19930;product=phosphoglycerate kinase;protein_id=WP_025160206.1;transl_table=11 NZ_JPQY01000032.1 RefSeq gene 93480 94496 . - . ID=gene-IY40_RS19935;Name=epd;gbkey=Gene;gene=epd;gene_biotype=protein_coding;locus_tag=IY40_RS19935;old_locus_tag=IY40_20280 NZ_JPQY01000032.1 Protein Homology CDS 93480 94496 . - 0 ID=cds-WP_004931582.1;Parent=gene-IY40_RS19935;Dbxref=GenBank:WP_004931582.1;Name=WP_004931582.1;Ontology_term=GO:0042823,GO:0048001,GO:0051287;gbkey=CDS;gene=epd;go_function=erythrose-4-phosphate dehydrogenase activity|0048001||IEA,NAD binding|0051287||IEA;go_process=pyridoxal phosphate biosynthetic process|0042823||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209964.1;locus_tag=IY40_RS19935;product=erythrose-4-phosphate dehydrogenase;protein_id=WP_004931582.1;transl_table=11 NZ_JPQY01000032.1 RefSeq pseudogene 94808 94936 . - . ID=gene-IY40_RS26520;Name=IY40_RS26520;end_range=94936,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IY40_RS26520;partial=true;pseudo=true NZ_JPQY01000032.1 Protein Homology CDS 94808 94936 . - 0 ID=cds-IY40_RS26520;Parent=gene-IY40_RS26520;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=94936,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015378995.1;locus_tag=IY40_RS26520;partial=true;product=LysR family transcriptional regulator;pseudo=true;transl_table=11 NZ_JPQY01000032.1 RefSeq gene 95000 96070 . - . ID=gene-IY40_RS19940;Name=IY40_RS19940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS19940;old_locus_tag=IY40_20285 NZ_JPQY01000032.1 Protein Homology CDS 95000 96070 . - 0 ID=cds-WP_043142690.1;Parent=gene-IY40_RS19940;Dbxref=GenBank:WP_043142690.1;Name=WP_043142690.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015379001.1;locus_tag=IY40_RS19940;product=ABC transporter ATP-binding protein;protein_id=WP_043142690.1;transl_table=11 NZ_JPQY01000032.1 RefSeq gene 96063 97832 . - . ID=gene-IY40_RS19945;Name=IY40_RS19945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS19945;old_locus_tag=IY40_20290 NZ_JPQY01000032.1 Protein Homology CDS 96063 97832 . - 0 ID=cds-WP_025304187.1;Parent=gene-IY40_RS19945;Dbxref=GenBank:WP_025304187.1;Name=WP_025304187.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002231049.1;locus_tag=IY40_RS19945;product=ABC transporter permease;protein_id=WP_025304187.1;transl_table=11 NZ_JPQY01000032.1 RefSeq gene 97911 98999 . - . ID=gene-IY40_RS19950;Name=IY40_RS19950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS19950;old_locus_tag=IY40_20295 NZ_JPQY01000032.1 Protein Homology CDS 97911 98999 . - 0 ID=cds-WP_043142713.1;Parent=gene-IY40_RS19950;Dbxref=GenBank:WP_043142713.1;Name=WP_043142713.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013814425.1;locus_tag=IY40_RS19950;product=ABC transporter substrate-binding protein;protein_id=WP_043142713.1;transl_table=11 NZ_JPQY01000032.1 RefSeq gene 99164 100081 . - . ID=gene-IY40_RS19955;Name=IY40_RS19955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS19955;old_locus_tag=IY40_20300 NZ_JPQY01000032.1 Protein Homology CDS 99164 100081 . - 0 ID=cds-WP_043142693.1;Parent=gene-IY40_RS19955;Dbxref=GenBank:WP_043142693.1;Name=WP_043142693.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019455605.1;locus_tag=IY40_RS19955;product=DMT family transporter;protein_id=WP_043142693.1;transl_table=11 NZ_JPQY01000032.1 RefSeq gene 100372 100704 . + . ID=gene-IY40_RS19960;Name=IY40_RS19960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS19960;old_locus_tag=IY40_20305 NZ_JPQY01000032.1 Protein Homology CDS 100372 100704 . + 0 ID=cds-WP_025304190.1;Parent=gene-IY40_RS19960;Dbxref=GenBank:WP_025304190.1;Name=WP_025304190.1;Ontology_term=GO:0000049;gbkey=CDS;go_function=tRNA binding|0000049||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004931561.1;locus_tag=IY40_RS19960;product=tRNA-binding protein;protein_id=WP_025304190.1;transl_table=11 NZ_JPQY01000032.1 RefSeq gene 100735 101616 . + . ID=gene-IY40_RS19965;Name=IY40_RS19965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS19965;old_locus_tag=IY40_20310 NZ_JPQY01000032.1 Protein Homology CDS 100735 101616 . + 0 ID=cds-WP_025304191.1;Parent=gene-IY40_RS19965;Dbxref=GenBank:WP_025304191.1;Name=WP_025304191.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015379003.1;locus_tag=IY40_RS19965;product=2OG-Fe dioxygenase family protein;protein_id=WP_025304191.1;transl_table=11 NZ_JPQY01000032.1 RefSeq gene 101830 103152 . + . ID=gene-IY40_RS19970;Name=brnQ;gbkey=Gene;gene=brnQ;gene_biotype=protein_coding;locus_tag=IY40_RS19970;old_locus_tag=IY40_20315 NZ_JPQY01000032.1 Protein Homology CDS 101830 103152 . + 0 ID=cds-WP_043142696.1;Parent=gene-IY40_RS19970;Dbxref=GenBank:WP_043142696.1;Name=WP_043142696.1;Ontology_term=GO:0015803,GO:0015658,GO:0016020;gbkey=CDS;gene=brnQ;go_component=membrane|0016020||IEA;go_function=branched-chain amino acid transmembrane transporter activity|0015658||IEA;go_process=branched-chain amino acid transport|0015803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015379004.1;locus_tag=IY40_RS19970;product=branched-chain amino acid transport system II carrier protein;protein_id=WP_043142696.1;transl_table=11 NZ_JPQY01000032.1 RefSeq gene 103222 105216 . - . ID=gene-IY40_RS19975;Name=tkt;gbkey=Gene;gene=tkt;gene_biotype=protein_coding;locus_tag=IY40_RS19975;old_locus_tag=IY40_20320 NZ_JPQY01000032.1 Protein Homology CDS 103222 105216 . - 0 ID=cds-WP_043142698.1;Parent=gene-IY40_RS19975;Dbxref=GenBank:WP_043142698.1;Name=WP_043142698.1;Ontology_term=GO:0004802;gbkey=CDS;gene=tkt;go_function=transketolase activity|0004802||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015379005.1;locus_tag=IY40_RS19975;product=transketolase;protein_id=WP_043142698.1;transl_table=11 NZ_JPQY01000032.1 RefSeq gene 105455 106207 . + . ID=gene-IY40_RS19980;Name=loiP;gbkey=Gene;gene=loiP;gene_biotype=protein_coding;locus_tag=IY40_RS19980;old_locus_tag=IY40_20325 NZ_JPQY01000032.1 Protein Homology CDS 105455 106207 . + 0 ID=cds-WP_016930039.1;Parent=gene-IY40_RS19980;Dbxref=GenBank:WP_016930039.1;Name=WP_016930039.1;Ontology_term=GO:0004222;gbkey=CDS;gene=loiP;go_function=metalloendopeptidase activity|0004222||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005192806.1;locus_tag=IY40_RS19980;product=metalloprotease LoiP;protein_id=WP_016930039.1;transl_table=11 ##sequence-region NZ_JPQY01000033.1 1 40399 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=615 NZ_JPQY01000033.1 RefSeq region 1 40399 . + . ID=NZ_JPQY01000033.1:1..40399;Dbxref=taxon:615;collected-by=Mahloro H. Serepa%3B Vincent M. Gray;collection-date=2013-04-11;country=South Africa: North West Province;gbkey=Src;genome=genomic;identified-by=Mahloro H. Serepa%3B Vincent M. Gray;isolation-source=entomopathogenic nematode Oscheius sp. MCB living in soil;mol_type=genomic DNA;nat-host=Oscheius sp. MCB;strain=MCB NZ_JPQY01000033.1 RefSeq gene 1 221 . - . ID=gene-IY40_RS19985;Name=IY40_RS19985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS19985;old_locus_tag=IY40_20330;partial=true;start_range=.,1 NZ_JPQY01000033.1 Protein Homology CDS 1 221 . - 0 ID=cds-WP_043142733.1;Parent=gene-IY40_RS19985;Dbxref=GenBank:WP_043142733.1;Name=WP_043142733.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013812824.1;locus_tag=IY40_RS19985;partial=true;product=MFS transporter;protein_id=WP_043142733.1;start_range=.,1;transl_table=11 NZ_JPQY01000033.1 RefSeq gene 473 919 . + . ID=gene-IY40_RS19990;Name=IY40_RS19990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS19990;old_locus_tag=IY40_20335 NZ_JPQY01000033.1 Protein Homology CDS 473 919 . + 0 ID=cds-WP_038629307.1;Parent=gene-IY40_RS19990;Dbxref=GenBank:WP_038629307.1;Name=WP_038629307.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019456317.1;locus_tag=IY40_RS19990;product=MarR family winged helix-turn-helix transcriptional regulator;protein_id=WP_038629307.1;transl_table=11 NZ_JPQY01000033.1 RefSeq gene 957 1238 . - . ID=gene-IY40_RS19995;Name=IY40_RS19995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS19995;old_locus_tag=IY40_20340 NZ_JPQY01000033.1 Protein Homology CDS 957 1238 . - 0 ID=cds-WP_004940713.1;Parent=gene-IY40_RS19995;Dbxref=GenBank:WP_004940713.1;Name=WP_004940713.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004940713.1;locus_tag=IY40_RS19995;product=YjcB family protein;protein_id=WP_004940713.1;transl_table=11 NZ_JPQY01000033.1 RefSeq gene 1533 3458 . + . ID=gene-IY40_RS20000;Name=mrdA;gbkey=Gene;gene=mrdA;gene_biotype=protein_coding;locus_tag=IY40_RS20000;old_locus_tag=IY40_20345 NZ_JPQY01000033.1 Protein Homology CDS 1533 3458 . + 0 ID=cds-WP_043142736.1;Parent=gene-IY40_RS20000;Dbxref=GenBank:WP_043142736.1;Name=WP_043142736.1;Ontology_term=GO:0009252,GO:0003824,GO:0008658,GO:0016020;gbkey=CDS;gene=mrdA;go_component=membrane|0016020||IEA;go_function=catalytic activity|0003824||IEA,penicillin binding|0008658||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006318778.1;locus_tag=IY40_RS20000;product=penicillin-binding protein 2;protein_id=WP_043142736.1;transl_table=11 NZ_JPQY01000033.1 RefSeq gene 3566 5284 . + . ID=gene-IY40_RS20005;Name=IY40_RS20005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS20005;old_locus_tag=IY40_20350 NZ_JPQY01000033.1 Protein Homology CDS 3566 5284 . + 0 ID=cds-WP_043142739.1;Parent=gene-IY40_RS20005;Dbxref=GenBank:WP_043142739.1;Name=WP_043142739.1;Ontology_term=GO:0008658;gbkey=CDS;go_function=penicillin binding|0008658||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017892784.1;locus_tag=IY40_RS20005;product=penicillin-binding transpeptidase domain-containing protein;protein_id=WP_043142739.1;transl_table=11 NZ_JPQY01000033.1 RefSeq gene 5291 5686 . - . ID=gene-IY40_RS20010;Name=IY40_RS20010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS20010;old_locus_tag=IY40_20355 NZ_JPQY01000033.1 Protein Homology CDS 5291 5686 . - 0 ID=cds-WP_043142743.1;Parent=gene-IY40_RS20010;Dbxref=GenBank:WP_043142743.1;Name=WP_043142743.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019456313.1;locus_tag=IY40_RS20010;product=SRPBCC family protein;protein_id=WP_043142743.1;transl_table=11 NZ_JPQY01000033.1 RefSeq gene 5736 6974 . - . ID=gene-IY40_RS20015;Name=IY40_RS20015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS20015;old_locus_tag=IY40_20360 NZ_JPQY01000033.1 Protein Homology CDS 5736 6974 . - 0 ID=cds-WP_043142747.1;Parent=gene-IY40_RS20015;Dbxref=GenBank:WP_043142747.1;Name=WP_043142747.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015377831.1;locus_tag=IY40_RS20015;product=hypothetical protein;protein_id=WP_043142747.1;transl_table=11 NZ_JPQY01000033.1 RefSeq gene 7311 8927 . + . ID=gene-IY40_RS20020;Name=IY40_RS20020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS20020;old_locus_tag=IY40_20365 NZ_JPQY01000033.1 Protein Homology CDS 7311 8927 . + 0 ID=cds-WP_043142750.1;Parent=gene-IY40_RS20020;Dbxref=GenBank:WP_043142750.1;Name=WP_043142750.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004940702.1;locus_tag=IY40_RS20020;product=methyl-accepting chemotaxis protein;protein_id=WP_043142750.1;transl_table=11 NZ_JPQY01000033.1 RefSeq gene 9082 9294 . - . ID=gene-IY40_RS20025;Name=osmB;gbkey=Gene;gene=osmB;gene_biotype=protein_coding;locus_tag=IY40_RS20025;old_locus_tag=IY40_20370 NZ_JPQY01000033.1 Protein Homology CDS 9082 9294 . - 0 ID=cds-WP_004940700.1;Parent=gene-IY40_RS20025;Dbxref=GenBank:WP_004940700.1;Name=WP_004940700.1;gbkey=CDS;gene=osmB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004962802.1;locus_tag=IY40_RS20025;product=osmotically-inducible lipoprotein OsmB;protein_id=WP_004940700.1;transl_table=11 NZ_JPQY01000033.1 RefSeq gene 9526 9921 . + . ID=gene-IY40_RS20030;Name=IY40_RS20030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS20030;old_locus_tag=IY40_20375 NZ_JPQY01000033.1 Protein Homology CDS 9526 9921 . + 0 ID=cds-WP_025302787.1;Parent=gene-IY40_RS20030;Dbxref=GenBank:WP_025302787.1;Name=WP_025302787.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004940699.1;locus_tag=IY40_RS20030;product=DUF427 domain-containing protein;protein_id=WP_025302787.1;transl_table=11 NZ_JPQY01000033.1 RefSeq gene 10052 10522 . + . ID=gene-IY40_RS20035;Name=IY40_RS20035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS20035;old_locus_tag=IY40_20380 NZ_JPQY01000033.1 Protein Homology CDS 10052 10522 . + 0 ID=cds-WP_043142753.1;Parent=gene-IY40_RS20035;Dbxref=GenBank:WP_043142753.1;Name=WP_043142753.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016927780.1;locus_tag=IY40_RS20035;product=Rrf2 family transcriptional regulator;protein_id=WP_043142753.1;transl_table=11 NZ_JPQY01000033.1 RefSeq gene 10716 10853 . + . ID=gene-IY40_RS25465;Name=IY40_RS25465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS25465;old_locus_tag=IY40_20385 NZ_JPQY01000033.1 Protein Homology CDS 10716 10853 . + 0 ID=cds-WP_016927779.1;Parent=gene-IY40_RS25465;Dbxref=GenBank:WP_016927779.1;Name=WP_016927779.1;Ontology_term=GO:1990961,GO:0042910,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=xenobiotic transmembrane transporter activity|0042910||IEA;go_process=xenobiotic detoxification by transmembrane export across the plasma membrane|1990961||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004940695.1;locus_tag=IY40_RS25465;product=AcrZ family multidrug efflux pump-associated protein;protein_id=WP_016927779.1;transl_table=11 NZ_JPQY01000033.1 RefSeq gene 10893 11654 . - . ID=gene-IY40_RS20045;Name=IY40_RS20045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS20045;old_locus_tag=IY40_20390 NZ_JPQY01000033.1 Protein Homology CDS 10893 11654 . - 0 ID=cds-WP_025302789.1;Parent=gene-IY40_RS20045;Dbxref=GenBank:WP_025302789.1;Name=WP_025302789.1;Ontology_term=GO:0005524,GO:0015424,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ABC-type amino acid transporter activity|0015424||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004940693.1;locus_tag=IY40_RS20045;product=amino acid ABC transporter ATP-binding protein;protein_id=WP_025302789.1;transl_table=11 NZ_JPQY01000033.1 RefSeq gene 11651 12556 . - . ID=gene-IY40_RS20050;Name=IY40_RS20050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS20050;old_locus_tag=IY40_20395 NZ_JPQY01000033.1 Protein Homology CDS 11651 12556 . - 0 ID=cds-WP_025302790.1;Parent=gene-IY40_RS20050;Dbxref=GenBank:WP_025302790.1;Name=WP_025302790.1;Ontology_term=GO:0006865,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006325143.1;locus_tag=IY40_RS20050;product=amino acid ABC transporter permease;protein_id=WP_025302790.1;transl_table=11 NZ_JPQY01000033.1 RefSeq gene 12553 13467 . - . ID=gene-IY40_RS20055;Name=IY40_RS20055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS20055;old_locus_tag=IY40_20400 NZ_JPQY01000033.1 Protein Homology CDS 12553 13467 . - 0 ID=cds-WP_043142756.1;Parent=gene-IY40_RS20055;Dbxref=GenBank:WP_043142756.1;Name=WP_043142756.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016927777.1;locus_tag=IY40_RS20055;product=ABC transporter substrate-binding protein;protein_id=WP_043142756.1;transl_table=11 NZ_JPQY01000033.1 RefSeq gene 13485 14822 . - . ID=gene-IY40_RS20060;Name=IY40_RS20060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS20060;old_locus_tag=IY40_20405 NZ_JPQY01000033.1 Protein Homology CDS 13485 14822 . - 0 ID=cds-WP_043142760.1;Parent=gene-IY40_RS20060;Dbxref=GenBank:WP_043142760.1;Name=WP_043142760.1;Ontology_term=GO:0010181,GO:0016491;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013812845.1;locus_tag=IY40_RS20060;product=LLM class flavin-dependent oxidoreductase;protein_id=WP_043142760.1;transl_table=11 NZ_JPQY01000033.1 RefSeq gene 14842 16146 . - . ID=gene-IY40_RS20065;Name=IY40_RS20065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS20065;old_locus_tag=IY40_20410 NZ_JPQY01000033.1 Protein Homology CDS 14842 16146 . - 0 ID=cds-WP_043142764.1;Parent=gene-IY40_RS20065;Dbxref=GenBank:WP_043142764.1;Name=WP_043142764.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015377837.1;locus_tag=IY40_RS20065;product=MmgE/PrpD family protein;protein_id=WP_043142764.1;transl_table=11 NZ_JPQY01000033.1 RefSeq gene 16372 17259 . - . ID=gene-IY40_RS20070;Name=IY40_RS20070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS20070;old_locus_tag=IY40_20415 NZ_JPQY01000033.1 Protein Homology CDS 16372 17259 . - 0 ID=cds-WP_025302794.1;Parent=gene-IY40_RS20070;Dbxref=GenBank:WP_025302794.1;Name=WP_025302794.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013812847.1;locus_tag=IY40_RS20070;product=LysR family transcriptional regulator;protein_id=WP_025302794.1;transl_table=11 NZ_JPQY01000033.1 RefSeq gene 17381 18538 . + . ID=gene-IY40_RS20075;Name=IY40_RS20075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS20075;old_locus_tag=IY40_20420 NZ_JPQY01000033.1 Protein Homology CDS 17381 18538 . + 0 ID=cds-WP_043142770.1;Parent=gene-IY40_RS20075;Dbxref=GenBank:WP_043142770.1;Name=WP_043142770.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004940684.1;locus_tag=IY40_RS20075;product=serine hydrolase domain-containing protein;protein_id=WP_043142770.1;transl_table=11 NZ_JPQY01000033.1 RefSeq gene 18538 19755 . + . ID=gene-IY40_RS20080;Name=IY40_RS20080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS20080;old_locus_tag=IY40_20425 NZ_JPQY01000033.1 Protein Homology CDS 18538 19755 . + 0 ID=cds-WP_043142772.1;Parent=gene-IY40_RS20080;Dbxref=GenBank:WP_043142772.1;Name=WP_043142772.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016927772.1;locus_tag=IY40_RS20080;product=MFS transporter;protein_id=WP_043142772.1;transl_table=11 NZ_JPQY01000033.1 RefSeq gene 19682 20557 . - . ID=gene-IY40_RS20085;Name=IY40_RS20085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS20085;old_locus_tag=IY40_20430 NZ_JPQY01000033.1 Protein Homology CDS 19682 20557 . - 0 ID=cds-WP_043142804.1;Parent=gene-IY40_RS20085;Dbxref=GenBank:WP_043142804.1;Name=WP_043142804.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004940682.1;locus_tag=IY40_RS20085;product=alpha/beta hydrolase;protein_id=WP_043142804.1;transl_table=11 NZ_JPQY01000033.1 RefSeq gene 20710 21459 . + . ID=gene-IY40_RS20090;Name=IY40_RS20090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS20090;old_locus_tag=IY40_20435 NZ_JPQY01000033.1 Protein Homology CDS 20710 21459 . + 0 ID=cds-WP_025302798.1;Parent=gene-IY40_RS20090;Dbxref=GenBank:WP_025302798.1;Name=WP_025302798.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019456303.1;locus_tag=IY40_RS20090;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_025302798.1;transl_table=11 NZ_JPQY01000033.1 RefSeq gene 21472 22539 . + . ID=gene-IY40_RS20095;Name=IY40_RS20095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS20095;old_locus_tag=IY40_20440 NZ_JPQY01000033.1 Protein Homology CDS 21472 22539 . + 0 ID=cds-WP_025302799.1;Parent=gene-IY40_RS20095;Dbxref=GenBank:WP_025302799.1;Name=WP_025302799.1;Ontology_term=GO:0000166;gbkey=CDS;go_function=nucleotide binding|0000166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019456302.1;locus_tag=IY40_RS20095;product=oxidoreductase;protein_id=WP_025302799.1;transl_table=11 NZ_JPQY01000033.1 RefSeq gene 22653 24050 . + . ID=gene-IY40_RS20100;Name=IY40_RS20100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS20100;old_locus_tag=IY40_20445 NZ_JPQY01000033.1 Protein Homology CDS 22653 24050 . + 0 ID=cds-WP_043142777.1;Parent=gene-IY40_RS20100;Dbxref=GenBank:WP_043142777.1;Name=WP_043142777.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015377844.1;locus_tag=IY40_RS20100;product=MFS transporter;protein_id=WP_043142777.1;transl_table=11 NZ_JPQY01000033.1 RefSeq gene 24035 24574 . - . ID=gene-IY40_RS20105;Name=IY40_RS20105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS20105;old_locus_tag=IY40_20450 NZ_JPQY01000033.1 Protein Homology CDS 24035 24574 . - 0 ID=cds-WP_188016062.1;Parent=gene-IY40_RS20105;Dbxref=GenBank:WP_188016062.1;Name=WP_188016062.1;Ontology_term=GO:0046654,GO:0004146,GO:0050661;gbkey=CDS;go_function=dihydrofolate reductase activity|0004146||IEA,NADP binding|0050661||IEA;go_process=tetrahydrofolate biosynthetic process|0046654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019456300.1;locus_tag=IY40_RS20105;product=dihydrofolate reductase family protein;protein_id=WP_188016062.1;transl_table=11 NZ_JPQY01000033.1 RefSeq gene 24574 24975 . - . ID=gene-IY40_RS20110;Name=IY40_RS20110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS20110;old_locus_tag=IY40_20455 NZ_JPQY01000033.1 Protein Homology CDS 24574 24975 . - 0 ID=cds-WP_025302802.1;Parent=gene-IY40_RS20110;Dbxref=GenBank:WP_025302802.1;Name=WP_025302802.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015377846.1;locus_tag=IY40_RS20110;product=VOC family protein;protein_id=WP_025302802.1;transl_table=11 NZ_JPQY01000033.1 RefSeq gene 25117 25311 . - . ID=gene-IY40_RS20115;Name=IY40_RS20115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS20115;old_locus_tag=IY40_20460 NZ_JPQY01000033.1 Protein Homology CDS 25117 25311 . - 0 ID=cds-WP_004928567.1;Parent=gene-IY40_RS20115;Dbxref=GenBank:WP_004928567.1;Name=WP_004928567.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019455315.1;locus_tag=IY40_RS20115;product=ribbon-helix-helix protein%2C CopG family;protein_id=WP_004928567.1;transl_table=11 NZ_JPQY01000033.1 RefSeq gene 25392 26180 . - . ID=gene-IY40_RS20120;Name=IY40_RS20120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS20120;old_locus_tag=IY40_20465 NZ_JPQY01000033.1 Protein Homology CDS 25392 26180 . - 0 ID=cds-WP_043142786.1;Parent=gene-IY40_RS20120;Dbxref=GenBank:WP_043142786.1;Name=WP_043142786.1;Ontology_term=GO:0004766,GO:1904047;gbkey=CDS;go_function=spermidine synthase activity|0004766||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019455316.1;locus_tag=IY40_RS20120;product=spermidine synthase;protein_id=WP_043142786.1;transl_table=11 NZ_JPQY01000033.1 RefSeq gene 26211 26666 . - . ID=gene-IY40_RS20125;Name=fabZ;gbkey=Gene;gene=fabZ;gene_biotype=protein_coding;locus_tag=IY40_RS20125;old_locus_tag=IY40_20470 NZ_JPQY01000033.1 Protein Homology CDS 26211 26666 . - 0 ID=cds-WP_025302804.1;Parent=gene-IY40_RS20125;Dbxref=GenBank:WP_025302804.1;Name=WP_025302804.1;gbkey=CDS;gene=fabZ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015377847.1;locus_tag=IY40_RS20125;product=3-hydroxyacyl-ACP dehydratase FabZ;protein_id=WP_025302804.1;transl_table=11 NZ_JPQY01000033.1 RefSeq gene 26856 27350 . - . ID=gene-IY40_RS20130;Name=IY40_RS20130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS20130;old_locus_tag=IY40_20475 NZ_JPQY01000033.1 Protein Homology CDS 26856 27350 . - 0 ID=cds-WP_025302805.1;Parent=gene-IY40_RS20130;Dbxref=GenBank:WP_025302805.1;Name=WP_025302805.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311913.1;locus_tag=IY40_RS20130;product=TIGR00645 family protein;protein_id=WP_025302805.1;transl_table=11 NZ_JPQY01000033.1 RefSeq gene 27456 28655 . - . ID=gene-IY40_RS20135;Name=IY40_RS20135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS20135;old_locus_tag=IY40_20480 NZ_JPQY01000033.1 Protein Homology CDS 27456 28655 . - 0 ID=cds-WP_043142790.1;Parent=gene-IY40_RS20135;Dbxref=GenBank:WP_043142790.1;Name=WP_043142790.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004928558.1;locus_tag=IY40_RS20135;product=MFS transporter;protein_id=WP_043142790.1;transl_table=11 NZ_JPQY01000033.1 RefSeq gene 28753 29694 . + . ID=gene-IY40_RS20140;Name=IY40_RS20140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS20140;old_locus_tag=IY40_20485 NZ_JPQY01000033.1 Protein Homology CDS 28753 29694 . + 0 ID=cds-WP_025302807.1;Parent=gene-IY40_RS20140;Dbxref=GenBank:WP_025302807.1;Name=WP_025302807.1;Ontology_term=GO:0006355,GO:0001216,GO:0032993;gbkey=CDS;go_component=protein-DNA complex|0032993||IEA;go_function=DNA-binding transcription activator activity|0001216||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004928555.1;locus_tag=IY40_RS20140;product=LysR family transcriptional regulator;protein_id=WP_025302807.1;transl_table=11 NZ_JPQY01000033.1 RefSeq gene 29701 29994 . - . ID=gene-IY40_RS20145;Name=IY40_RS20145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS20145;old_locus_tag=IY40_20490 NZ_JPQY01000033.1 Protein Homology CDS 29701 29994 . - 0 ID=cds-WP_004928553.1;Parent=gene-IY40_RS20145;Dbxref=GenBank:WP_004928553.1;Name=WP_004928553.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004928553.1;locus_tag=IY40_RS20145;product=Rdx family protein;protein_id=WP_004928553.1;transl_table=11 NZ_JPQY01000033.1 RefSeq gene 30061 31545 . - . ID=gene-IY40_RS20150;Name=IY40_RS20150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS20150;old_locus_tag=IY40_20495 NZ_JPQY01000033.1 Protein Homology CDS 30061 31545 . - 0 ID=cds-WP_043142797.1;Parent=gene-IY40_RS20150;Dbxref=GenBank:WP_043142797.1;Name=WP_043142797.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF027980.6;locus_tag=IY40_RS20150;product=Ca2+-dependent phosphoinositide-specific phospholipase C;protein_id=WP_043142797.1;transl_table=11 NZ_JPQY01000033.1 RefSeq gene 31604 39550 . - . ID=gene-IY40_RS20155;Name=IY40_RS20155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS20155;old_locus_tag=IY40_20500 NZ_JPQY01000033.1 Protein Homology CDS 31604 39550 . - 0 ID=cds-WP_161781788.1;Parent=gene-IY40_RS20155;Dbxref=GenBank:WP_161781788.1;Name=WP_161781788.1;Ontology_term=GO:0030246;gbkey=CDS;go_function=carbohydrate binding|0030246||IEA;inference=COORDINATES: protein motif:HMM:TIGR03696.1;locus_tag=IY40_RS20155;product=RHS repeat domain-containing protein;protein_id=WP_161781788.1;transl_table=11 NZ_JPQY01000033.1 RefSeq gene 39906 40115 . - . ID=gene-IY40_RS20160;Name=IY40_RS20160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS20160;old_locus_tag=IY40_20505 NZ_JPQY01000033.1 GeneMarkS-2+ CDS 39906 40115 . - 0 ID=cds-WP_049207659.1;Parent=gene-IY40_RS20160;Dbxref=GenBank:WP_049207659.1;Name=WP_049207659.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IY40_RS20160;product=hypothetical protein;protein_id=WP_049207659.1;transl_table=11 ##sequence-region NZ_JPQY01000034.1 1 18879 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=615 NZ_JPQY01000034.1 RefSeq region 1 18879 . + . ID=NZ_JPQY01000034.1:1..18879;Dbxref=taxon:615;collected-by=Mahloro H. Serepa%3B Vincent M. Gray;collection-date=2013-04-11;country=South Africa: North West Province;gbkey=Src;genome=genomic;identified-by=Mahloro H. Serepa%3B Vincent M. Gray;isolation-source=entomopathogenic nematode Oscheius sp. MCB living in soil;mol_type=genomic DNA;nat-host=Oscheius sp. MCB;strain=MCB NZ_JPQY01000034.1 RefSeq gene 1 270 . + . ID=gene-IY40_RS25470;Name=IY40_RS25470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS25470;partial=true;start_range=.,1 NZ_JPQY01000034.1 Protein Homology CDS 1 270 . + 0 ID=cds-WP_200877952.1;Parent=gene-IY40_RS25470;Dbxref=GenBank:WP_200877952.1;Name=WP_200877952.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310879.1;locus_tag=IY40_RS25470;partial=true;product=sugar transferase;protein_id=WP_200877952.1;start_range=.,1;transl_table=11 NZ_JPQY01000034.1 RefSeq gene 327 1493 . + . ID=gene-IY40_RS20165;Name=IY40_RS20165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS20165;old_locus_tag=IY40_20510 NZ_JPQY01000034.1 Protein Homology CDS 327 1493 . + 0 ID=cds-WP_050505177.1;Parent=gene-IY40_RS20165;Dbxref=GenBank:WP_050505177.1;Name=WP_050505177.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013812204.1;locus_tag=IY40_RS20165;product=hypothetical protein;protein_id=WP_050505177.1;transl_table=11 NZ_JPQY01000034.1 RefSeq gene 1561 3390 . + . ID=gene-IY40_RS26045;Name=IY40_RS26045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS26045 NZ_JPQY01000034.1 GeneMarkS-2+ CDS 1561 3390 . + 0 ID=cds-WP_152561311.1;Parent=gene-IY40_RS26045;Dbxref=GenBank:WP_152561311.1;Name=WP_152561311.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IY40_RS26045;product=hypothetical protein;protein_id=WP_152561311.1;transl_table=11 NZ_JPQY01000034.1 RefSeq gene 4759 7764 . + . ID=gene-IY40_RS20175;Name=IY40_RS20175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS20175;old_locus_tag=IY40_20525 NZ_JPQY01000034.1 Protein Homology CDS 4759 7764 . + 0 ID=cds-WP_043142819.1;Parent=gene-IY40_RS20175;Dbxref=GenBank:WP_043142819.1;Name=WP_043142819.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013812205.1;locus_tag=IY40_RS20175;product=beta strand repeat-containing protein;protein_id=WP_043142819.1;transl_table=11 NZ_JPQY01000034.1 RefSeq gene 8155 9927 . + . ID=gene-IY40_RS20180;Name=IY40_RS20180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS20180;old_locus_tag=IY40_20530 NZ_JPQY01000034.1 Protein Homology CDS 8155 9927 . + 0 ID=cds-WP_025302175.1;Parent=gene-IY40_RS20180;Dbxref=GenBank:WP_025302175.1;Name=WP_025302175.1;Ontology_term=GO:0030253,GO:0005524,GO:0016887,GO:0034040,GO:0140359,GO:0030256;gbkey=CDS;go_component=type I protein secretion system complex|0030256||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled lipid transmembrane transporter activity|0034040||IEA,ABC-type transporter activity|0140359||IEA;go_process=protein secretion by the type I secretion system|0030253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012006029.1;locus_tag=IY40_RS20180;product=type I secretion system permease/ATPase;protein_id=WP_025302175.1;transl_table=11 NZ_JPQY01000034.1 RefSeq gene 9980 11311 . + . ID=gene-IY40_RS20185;Name=IY40_RS20185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS20185;old_locus_tag=IY40_20535 NZ_JPQY01000034.1 Protein Homology CDS 9980 11311 . + 0 ID=cds-WP_025302176.1;Parent=gene-IY40_RS20185;Dbxref=GenBank:WP_025302176.1;Name=WP_025302176.1;Ontology_term=GO:0015031,GO:0030253,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=protein transport|0015031||IEA,protein secretion by the type I secretion system|0030253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012006030.1;locus_tag=IY40_RS20185;product=HlyD family type I secretion periplasmic adaptor subunit;protein_id=WP_025302176.1;transl_table=11 NZ_JPQY01000034.1 RefSeq gene 11314 12690 . + . ID=gene-IY40_RS20190;Name=IY40_RS20190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS20190;old_locus_tag=IY40_20540 NZ_JPQY01000034.1 Protein Homology CDS 11314 12690 . + 0 ID=cds-WP_025302177.1;Parent=gene-IY40_RS20190;Dbxref=GenBank:WP_025302177.1;Name=WP_025302177.1;Ontology_term=GO:0055085,GO:0015562,GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013812208.1;locus_tag=IY40_RS20190;product=TolC family outer membrane protein;protein_id=WP_025302177.1;transl_table=11 NZ_JPQY01000034.1 RefSeq gene 12965 14389 . + . ID=gene-IY40_RS20195;Name=IY40_RS20195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS20195;old_locus_tag=IY40_20545 NZ_JPQY01000034.1 Protein Homology CDS 12965 14389 . + 0 ID=cds-WP_043142822.1;Parent=gene-IY40_RS20195;Dbxref=GenBank:WP_043142822.1;Name=WP_043142822.1;Ontology_term=GO:0000271,GO:0016779;gbkey=CDS;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006324426.1;locus_tag=IY40_RS20195;product=mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase;protein_id=WP_043142822.1;transl_table=11 NZ_JPQY01000034.1 RefSeq gene 14402 15775 . + . ID=gene-IY40_RS20200;Name=cpsG;gbkey=Gene;gene=cpsG;gene_biotype=protein_coding;locus_tag=IY40_RS20200;old_locus_tag=IY40_20550 NZ_JPQY01000034.1 Protein Homology CDS 14402 15775 . + 0 ID=cds-WP_043142826.1;Parent=gene-IY40_RS20200;Dbxref=GenBank:WP_043142826.1;Name=WP_043142826.1;gbkey=CDS;gene=cpsG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006320945.1;locus_tag=IY40_RS20200;product=phosphomannomutase CpsG;protein_id=WP_043142826.1;transl_table=11 NZ_JPQY01000034.1 RefSeq gene 16147 17181 . + . ID=gene-IY40_RS20205;Name=galE;gbkey=Gene;gene=galE;gene_biotype=protein_coding;locus_tag=IY40_RS20205;old_locus_tag=IY40_20555 NZ_JPQY01000034.1 Protein Homology CDS 16147 17181 . + 0 ID=cds-WP_043142828.1;Parent=gene-IY40_RS20205;Dbxref=GenBank:WP_043142828.1;Name=WP_043142828.1;Ontology_term=GO:0006012,GO:0003978;gbkey=CDS;gene=galE;go_function=UDP-glucose 4-epimerase activity|0003978||IEA;go_process=galactose metabolic process|0006012||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011148890.1;locus_tag=IY40_RS20205;product=UDP-glucose 4-epimerase GalE;protein_id=WP_043142828.1;transl_table=11 NZ_JPQY01000034.1 RefSeq gene 17457 17993 . + . ID=gene-IY40_RS20210;Name=rfbC;gbkey=Gene;gene=rfbC;gene_biotype=protein_coding;locus_tag=IY40_RS20210;old_locus_tag=IY40_20560 NZ_JPQY01000034.1 Protein Homology CDS 17457 17993 . + 0 ID=cds-WP_043142832.1;Parent=gene-IY40_RS20210;Dbxref=GenBank:WP_043142832.1;Name=WP_043142832.1;Ontology_term=GO:0019305,GO:0008830;gbkey=CDS;gene=rfbC;go_function=dTDP-4-dehydrorhamnose 3%2C5-epimerase activity|0008830||IEA;go_process=dTDP-rhamnose biosynthetic process|0019305||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017490056.1;locus_tag=IY40_RS20210;product=dTDP-4-dehydrorhamnose 3%2C5-epimerase;protein_id=WP_043142832.1;transl_table=11 NZ_JPQY01000034.1 RefSeq gene 17990 18850 . + . ID=gene-IY40_RS20215;Name=rfbD;gbkey=Gene;gene=rfbD;gene_biotype=protein_coding;locus_tag=IY40_RS20215;old_locus_tag=IY40_20565 NZ_JPQY01000034.1 Protein Homology CDS 17990 18850 . + 0 ID=cds-WP_043142836.1;Parent=gene-IY40_RS20215;Dbxref=GenBank:WP_043142836.1;Name=WP_043142836.1;Ontology_term=GO:0009243,GO:0019305,GO:0008831;gbkey=CDS;gene=rfbD;go_function=dTDP-4-dehydrorhamnose reductase activity|0008831||IEA;go_process=O antigen biosynthetic process|0009243||IEA,dTDP-rhamnose biosynthetic process|0019305||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015671652.1;locus_tag=IY40_RS20215;product=dTDP-4-dehydrorhamnose reductase;protein_id=WP_043142836.1;transl_table=11 ##sequence-region NZ_JPQY01000035.1 1 26050 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=615 NZ_JPQY01000035.1 RefSeq region 1 26050 . + . ID=NZ_JPQY01000035.1:1..26050;Dbxref=taxon:615;collected-by=Mahloro H. Serepa%3B Vincent M. Gray;collection-date=2013-04-11;country=South Africa: North West Province;gbkey=Src;genome=genomic;identified-by=Mahloro H. Serepa%3B Vincent M. Gray;isolation-source=entomopathogenic nematode Oscheius sp. MCB living in soil;mol_type=genomic DNA;nat-host=Oscheius sp. MCB;strain=MCB NZ_JPQY01000035.1 RefSeq gene 9 563 . + . ID=gene-IY40_RS25475;Name=IY40_RS25475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS25475 NZ_JPQY01000035.1 Protein Homology CDS 9 563 . + 0 ID=cds-WP_072008272.1;Parent=gene-IY40_RS25475;Dbxref=GenBank:WP_072008272.1;Name=WP_072008272.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004105369.1;locus_tag=IY40_RS25475;product=tyrosine-type DNA invertase;protein_id=WP_072008272.1;transl_table=11 NZ_JPQY01000035.1 RefSeq gene 1637 2224 . + . ID=gene-IY40_RS20225;Name=IY40_RS20225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS20225;old_locus_tag=IY40_20575 NZ_JPQY01000035.1 Protein Homology CDS 1637 2224 . + 0 ID=cds-WP_232106084.1;Parent=gene-IY40_RS20225;Dbxref=GenBank:WP_232106084.1;Name=WP_232106084.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:NF012422.6;locus_tag=IY40_RS20225;product=LuxR C-terminal-related transcriptional regulator;protein_id=WP_232106084.1;transl_table=11 NZ_JPQY01000035.1 RefSeq gene 2360 2809 . + . ID=gene-IY40_RS20230;Name=IY40_RS20230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS20230;old_locus_tag=IY40_20580 NZ_JPQY01000035.1 Protein Homology CDS 2360 2809 . + 0 ID=cds-WP_043142855.1;Parent=gene-IY40_RS20230;Dbxref=GenBank:WP_043142855.1;Name=WP_043142855.1;Ontology_term=GO:0005198,GO:0098015;gbkey=CDS;go_component=virus tail|0098015||IEA;go_function=structural molecule activity|0005198||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004966142.1;locus_tag=IY40_RS20230;product=phage tail protein;protein_id=WP_043142855.1;transl_table=11 NZ_JPQY01000035.1 RefSeq gene 2866 3984 . + . ID=gene-IY40_RS20235;Name=IY40_RS20235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS20235;old_locus_tag=IY40_20585 NZ_JPQY01000035.1 Protein Homology CDS 2866 3984 . + 0 ID=cds-WP_043142858.1;Parent=gene-IY40_RS20235;Dbxref=GenBank:WP_043142858.1;Name=WP_043142858.1;Ontology_term=GO:0005576;gbkey=CDS;go_component=extracellular region|0005576||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015835471.1;locus_tag=IY40_RS20235;product=phage tail sheath family protein;protein_id=WP_043142858.1;transl_table=11 NZ_JPQY01000035.1 RefSeq gene 4040 5584 . + . ID=gene-IY40_RS24855;Name=IY40_RS24855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS24855 NZ_JPQY01000035.1 Protein Homology CDS 4040 5584 . + 0 ID=cds-WP_161781789.1;Parent=gene-IY40_RS24855;Dbxref=GenBank:WP_161781789.1;Name=WP_161781789.1;Ontology_term=GO:0005576;gbkey=CDS;go_component=extracellular region|0005576||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015834382.1;locus_tag=IY40_RS24855;product=phage tail sheath family protein;protein_id=WP_161781789.1;transl_table=11 NZ_JPQY01000035.1 RefSeq gene 5608 6849 . + . ID=gene-IY40_RS20245;Name=IY40_RS20245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS20245;old_locus_tag=IY40_20595 NZ_JPQY01000035.1 Protein Homology CDS 5608 6849 . + 0 ID=cds-WP_043142861.1;Parent=gene-IY40_RS20245;Dbxref=GenBank:WP_043142861.1;Name=WP_043142861.1;Ontology_term=GO:0005576;gbkey=CDS;go_component=extracellular region|0005576||IEA;inference=COORDINATES: protein motif:HMM:NF037565.6;locus_tag=IY40_RS20245;product=phage tail sheath family protein;protein_id=WP_043142861.1;transl_table=11 NZ_JPQY01000035.1 RefSeq gene 6846 7310 . + . ID=gene-IY40_RS20250;Name=IY40_RS20250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS20250;old_locus_tag=IY40_20600 NZ_JPQY01000035.1 Protein Homology CDS 6846 7310 . + 0 ID=cds-WP_043142866.1;Parent=gene-IY40_RS20250;Dbxref=GenBank:WP_043142866.1;Name=WP_043142866.1;Ontology_term=GO:0005198,GO:0098015;gbkey=CDS;go_component=virus tail|0098015||IEA;go_function=structural molecule activity|0005198||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004966134.1;locus_tag=IY40_RS20250;product=phage tail protein;protein_id=WP_043142866.1;transl_table=11 NZ_JPQY01000035.1 RefSeq gene 7307 7468 . + . ID=gene-IY40_RS26525;Name=IY40_RS26525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS26525 NZ_JPQY01000035.1 Protein Homology CDS 7307 7468 . + 0 ID=cds-WP_235211381.1;Parent=gene-IY40_RS26525;Dbxref=GenBank:WP_235211381.1;Name=WP_235211381.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF039278.5;locus_tag=IY40_RS26525;product=DUF5908 family protein;protein_id=WP_235211381.1;transl_table=11 NZ_JPQY01000035.1 RefSeq gene 7468 8136 . + . ID=gene-IY40_RS20255;Name=IY40_RS20255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS20255;old_locus_tag=IY40_20610 NZ_JPQY01000035.1 Protein Homology CDS 7468 8136 . + 0 ID=cds-WP_043142869.1;Parent=gene-IY40_RS20255;Dbxref=GenBank:WP_043142869.1;Name=WP_043142869.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF039279.5;locus_tag=IY40_RS20255;product=CIS tube protein;protein_id=WP_043142869.1;transl_table=11 NZ_JPQY01000035.1 RefSeq gene 8176 10317 . + . ID=gene-IY40_RS20260;Name=IY40_RS20260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS20260;old_locus_tag=IY40_20615 NZ_JPQY01000035.1 Protein Homology CDS 8176 10317 . + 0 ID=cds-WP_043142872.1;Parent=gene-IY40_RS20260;Dbxref=GenBank:WP_043142872.1;Name=WP_043142872.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017739.6;locus_tag=IY40_RS20260;product=phage baseplate assembly protein V;protein_id=WP_043142872.1;transl_table=11 NZ_JPQY01000035.1 RefSeq gene 10338 10811 . + . ID=gene-IY40_RS20265;Name=IY40_RS20265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS20265 NZ_JPQY01000035.1 Protein Homology CDS 10338 10811 . + 0 ID=cds-WP_043142875.1;Parent=gene-IY40_RS20265;Dbxref=GenBank:WP_043142875.1;Name=WP_043142875.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016829.6;locus_tag=IY40_RS20265;product=GPW/gp25 family protein;protein_id=WP_043142875.1;transl_table=11 NZ_JPQY01000035.1 RefSeq gene 10790 11215 . + . ID=gene-IY40_RS20270;Name=IY40_RS20270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS20270;old_locus_tag=IY40_20625 NZ_JPQY01000035.1 Protein Homology CDS 10790 11215 . + 0 ID=cds-WP_043142879.1;Parent=gene-IY40_RS20270;Dbxref=GenBank:WP_043142879.1;Name=WP_043142879.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004966126.1;locus_tag=IY40_RS20270;product=hypothetical protein;protein_id=WP_043142879.1;transl_table=11 NZ_JPQY01000035.1 RefSeq gene 11238 14843 . + . ID=gene-IY40_RS20275;Name=IY40_RS20275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS20275;old_locus_tag=IY40_20630 NZ_JPQY01000035.1 GeneMarkS-2+ CDS 11238 14843 . + 0 ID=cds-WP_043142882.1;Parent=gene-IY40_RS20275;Dbxref=GenBank:WP_043142882.1;Name=WP_043142882.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IY40_RS20275;product=hypothetical protein;protein_id=WP_043142882.1;transl_table=11 NZ_JPQY01000035.1 RefSeq gene 14927 18004 . + . ID=gene-IY40_RS20280;Name=IY40_RS20280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS20280;old_locus_tag=IY40_20635 NZ_JPQY01000035.1 GeneMarkS-2+ CDS 14927 18004 . + 0 ID=cds-WP_043142885.1;Parent=gene-IY40_RS20280;Dbxref=GenBank:WP_043142885.1;Name=WP_043142885.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IY40_RS20280;product=hypothetical protein;protein_id=WP_043142885.1;transl_table=11 NZ_JPQY01000035.1 RefSeq gene 18071 19870 . + . ID=gene-IY40_RS20285;Name=IY40_RS20285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS20285;old_locus_tag=IY40_20640 NZ_JPQY01000035.1 Protein Homology CDS 18071 19870 . + 0 ID=cds-WP_043142889.1;Parent=gene-IY40_RS20285;Dbxref=GenBank:WP_043142889.1;Name=WP_043142889.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF039901.5;locus_tag=IY40_RS20285;product=contractile injection system tape measure protein;protein_id=WP_043142889.1;transl_table=11 NZ_JPQY01000035.1 RefSeq gene 19867 22032 . + . ID=gene-IY40_RS20290;Name=IY40_RS20290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS20290 NZ_JPQY01000035.1 Protein Homology CDS 19867 22032 . + 0 ID=cds-WP_050505180.1;Parent=gene-IY40_RS20290;Dbxref=GenBank:WP_050505180.1;Name=WP_050505180.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004966108.1;locus_tag=IY40_RS20290;product=ATP-binding protein;protein_id=WP_050505180.1;transl_table=11 NZ_JPQY01000035.1 RefSeq gene 22117 23034 . + . ID=gene-IY40_RS24860;Name=IY40_RS24860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS24860 NZ_JPQY01000035.1 Protein Homology CDS 22117 23034 . + 0 ID=cds-WP_050505181.1;Parent=gene-IY40_RS24860;Dbxref=GenBank:WP_050505181.1;Name=WP_050505181.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025431.6;locus_tag=IY40_RS24860;product=Pvc16 family protein;protein_id=WP_050505181.1;transl_table=11 NZ_JPQY01000035.1 RefSeq gene 23095 24279 . + . ID=gene-IY40_RS20300;Name=IY40_RS20300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS20300;old_locus_tag=IY40_20655 NZ_JPQY01000035.1 GeneMarkS-2+ CDS 23095 24279 . + 0 ID=cds-WP_043142893.1;Parent=gene-IY40_RS20300;Dbxref=GenBank:WP_043142893.1;Name=WP_043142893.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IY40_RS20300;product=hypothetical protein;protein_id=WP_043142893.1;transl_table=11 NZ_JPQY01000035.1 RefSeq gene 24339 25217 . + . ID=gene-IY40_RS20305;Name=IY40_RS20305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS20305;old_locus_tag=IY40_20660 NZ_JPQY01000035.1 Protein Homology CDS 24339 25217 . + 0 ID=cds-WP_043142896.1;Parent=gene-IY40_RS20305;Dbxref=GenBank:WP_043142896.1;Name=WP_043142896.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019041.6;locus_tag=IY40_RS20305;product=GNAT family N-acetyltransferase;protein_id=WP_043142896.1;transl_table=11 NZ_JPQY01000035.1 RefSeq gene 25563 26050 . + . ID=gene-IY40_RS20310;Name=IY40_RS20310;end_range=26050,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS20310;old_locus_tag=IY40_20665;partial=true NZ_JPQY01000035.1 GeneMarkS-2+ CDS 25563 26050 . + 0 ID=cds-WP_043142900.1;Parent=gene-IY40_RS20310;Dbxref=GenBank:WP_043142900.1;Name=WP_043142900.1;end_range=26050,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IY40_RS20310;partial=true;product=LysM peptidoglycan-binding domain-containing protein;protein_id=WP_043142900.1;transl_table=11 ##sequence-region NZ_JPQY01000036.1 1 35182 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=615 NZ_JPQY01000036.1 RefSeq region 1 35182 . + . ID=NZ_JPQY01000036.1:1..35182;Dbxref=taxon:615;collected-by=Mahloro H. Serepa%3B Vincent M. Gray;collection-date=2013-04-11;country=South Africa: North West Province;gbkey=Src;genome=genomic;identified-by=Mahloro H. Serepa%3B Vincent M. Gray;isolation-source=entomopathogenic nematode Oscheius sp. MCB living in soil;mol_type=genomic DNA;nat-host=Oscheius sp. MCB;strain=MCB NZ_JPQY01000036.1 RefSeq gene 101 216 . + . ID=gene-IY40_RS20315;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=IY40_RS20315;old_locus_tag=IY40_20670 NZ_JPQY01000036.1 cmsearch rRNA 101 216 . + . ID=rna-IY40_RS20315;Parent=gene-IY40_RS20315;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=IY40_RS20315;product=5S ribosomal RNA NZ_JPQY01000036.1 cmsearch exon 101 216 . + . ID=exon-IY40_RS20315-1;Parent=rna-IY40_RS20315;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=IY40_RS20315;product=5S ribosomal RNA NZ_JPQY01000036.1 RefSeq gene 311 387 . + . ID=gene-IY40_RS20320;Name=IY40_RS20320;gbkey=Gene;gene_biotype=tRNA;locus_tag=IY40_RS20320;old_locus_tag=IY40_20675 NZ_JPQY01000036.1 tRNAscan-SE tRNA 311 387 . + . ID=rna-IY40_RS20320;Parent=gene-IY40_RS20320;anticodon=(pos:345..347);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=IY40_RS20320;product=tRNA-Asp NZ_JPQY01000036.1 tRNAscan-SE exon 311 387 . + . ID=exon-IY40_RS20320-1;Parent=rna-IY40_RS20320;anticodon=(pos:345..347);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=IY40_RS20320;product=tRNA-Asp NZ_JPQY01000036.1 RefSeq gene 439 514 . + . ID=gene-IY40_RS20325;Name=IY40_RS20325;gbkey=Gene;gene_biotype=tRNA;locus_tag=IY40_RS20325;old_locus_tag=IY40_20680 NZ_JPQY01000036.1 tRNAscan-SE tRNA 439 514 . + . ID=rna-IY40_RS20325;Parent=gene-IY40_RS20325;anticodon=(pos:472..474);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=IY40_RS20325;product=tRNA-Trp NZ_JPQY01000036.1 tRNAscan-SE exon 439 514 . + . ID=exon-IY40_RS20325-1;Parent=rna-IY40_RS20325;anticodon=(pos:472..474);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=IY40_RS20325;product=tRNA-Trp NZ_JPQY01000036.1 RefSeq gene 784 1611 . - . ID=gene-IY40_RS20330;Name=hdfR;gbkey=Gene;gene=hdfR;gene_biotype=protein_coding;locus_tag=IY40_RS20330;old_locus_tag=IY40_20685 NZ_JPQY01000036.1 Protein Homology CDS 784 1611 . - 0 ID=cds-WP_025304646.1;Parent=gene-IY40_RS20330;Dbxref=GenBank:WP_025304646.1;Name=WP_025304646.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=hdfR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004929945.1;locus_tag=IY40_RS20330;product=HTH-type transcriptional regulator HdfR;protein_id=WP_025304646.1;transl_table=11 NZ_JPQY01000036.1 RefSeq gene 1731 2069 . + . ID=gene-IY40_RS20335;Name=IY40_RS20335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS20335;old_locus_tag=IY40_20690 NZ_JPQY01000036.1 Protein Homology CDS 1731 2069 . + 0 ID=cds-WP_004929946.1;Parent=gene-IY40_RS20335;Dbxref=GenBank:WP_004929946.1;Name=WP_004929946.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312726.1;locus_tag=IY40_RS20335;product=MaoP family protein;protein_id=WP_004929946.1;transl_table=11 NZ_JPQY01000036.1 RefSeq gene 2097 3620 . - . ID=gene-IY40_RS20340;Name=IY40_RS20340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS20340;old_locus_tag=IY40_20695 NZ_JPQY01000036.1 Protein Homology CDS 2097 3620 . - 0 ID=cds-WP_043142915.1;Parent=gene-IY40_RS20340;Dbxref=GenBank:WP_043142915.1;Name=WP_043142915.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004929948.1;locus_tag=IY40_RS20340;product=YifB family Mg chelatase-like AAA ATPase;protein_id=WP_043142915.1;transl_table=11 NZ_JPQY01000036.1 RefSeq gene 3962 5194 . + . ID=gene-IY40_RS20345;Name=IY40_RS20345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS20345;old_locus_tag=IY40_20700 NZ_JPQY01000036.1 Protein Homology CDS 3962 5194 . + 0 ID=cds-WP_025304644.1;Parent=gene-IY40_RS20345;Dbxref=GenBank:WP_025304644.1;Name=WP_025304644.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004951720.1;locus_tag=IY40_RS20345;product=MFS transporter;protein_id=WP_025304644.1;transl_table=11 NZ_JPQY01000036.1 RefSeq gene 5328 5426 . + . ID=gene-IY40_RS25480;Name=ilvL;gbkey=Gene;gene=ilvL;gene_biotype=protein_coding;locus_tag=IY40_RS25480 NZ_JPQY01000036.1 Protein Homology CDS 5328 5426 . + 0 ID=cds-WP_013814970.1;Parent=gene-IY40_RS25480;Dbxref=GenBank:WP_013814970.1;Name=WP_013814970.1;Ontology_term=GO:0031556;gbkey=CDS;gene=ilvL;go_process=transcriptional attenuation by ribosome|0031556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312728.1;locus_tag=IY40_RS25480;product=ilv operon leader peptide;protein_id=WP_013814970.1;transl_table=11 NZ_JPQY01000036.1 RefSeq gene 5569 7215 . + . ID=gene-IY40_RS20350;Name=ilvG;gbkey=Gene;gene=ilvG;gene_biotype=protein_coding;locus_tag=IY40_RS20350;old_locus_tag=IY40_20705 NZ_JPQY01000036.1 Protein Homology CDS 5569 7215 . + 0 ID=cds-WP_043142918.1;Parent=gene-IY40_RS20350;Dbxref=GenBank:WP_043142918.1;Name=WP_043142918.1;Ontology_term=GO:0009082,GO:0000287,GO:0003984,GO:0030976,GO:0050660;gbkey=CDS;gene=ilvG;go_function=magnesium ion binding|0000287||IEA,acetolactate synthase activity|0003984||IEA,thiamine pyrophosphate binding|0030976||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224414.1;locus_tag=IY40_RS20350;product=acetolactate synthase 2 catalytic subunit;protein_id=WP_043142918.1;transl_table=11 NZ_JPQY01000036.1 RefSeq gene 7212 7469 . + . ID=gene-IY40_RS20355;Name=ilvM;gbkey=Gene;gene=ilvM;gene_biotype=protein_coding;locus_tag=IY40_RS20355;old_locus_tag=IY40_20710 NZ_JPQY01000036.1 Protein Homology CDS 7212 7469 . + 0 ID=cds-WP_004929955.1;Parent=gene-IY40_RS20355;Dbxref=GenBank:WP_004929955.1;Name=WP_004929955.1;gbkey=CDS;gene=ilvM;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224415.1;locus_tag=IY40_RS20355;product=acetolactate synthase 2 small subunit;protein_id=WP_004929955.1;transl_table=11 NZ_JPQY01000036.1 RefSeq gene 7493 8419 . + . ID=gene-IY40_RS20360;Name=IY40_RS20360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS20360;old_locus_tag=IY40_20715 NZ_JPQY01000036.1 Protein Homology CDS 7493 8419 . + 0 ID=cds-WP_033636413.1;Parent=gene-IY40_RS20360;Dbxref=GenBank:WP_033636413.1;Name=WP_033636413.1;Ontology_term=GO:0009081,GO:0004084;gbkey=CDS;go_function=branched-chain-amino-acid transaminase activity|0004084||IEA;go_process=branched-chain amino acid metabolic process|0009081||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212015.1;locus_tag=IY40_RS20360;product=branched-chain amino acid transaminase;protein_id=WP_033636413.1;transl_table=11 NZ_JPQY01000036.1 RefSeq gene 8526 10376 . + . ID=gene-IY40_RS20365;Name=ilvD;gbkey=Gene;gene=ilvD;gene_biotype=protein_coding;locus_tag=IY40_RS20365;old_locus_tag=IY40_20720 NZ_JPQY01000036.1 Protein Homology CDS 8526 10376 . + 0 ID=cds-WP_015379395.1;Parent=gene-IY40_RS20365;Dbxref=GenBank:WP_015379395.1;Name=WP_015379395.1;Ontology_term=GO:0009082,GO:0004160;gbkey=CDS;gene=ilvD;go_function=dihydroxy-acid dehydratase activity|0004160||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133366.1;locus_tag=IY40_RS20365;product=dihydroxy-acid dehydratase;protein_id=WP_015379395.1;transl_table=11 NZ_JPQY01000036.1 RefSeq gene 10382 11926 . + . ID=gene-IY40_RS20370;Name=ilvA;gbkey=Gene;gene=ilvA;gene_biotype=protein_coding;locus_tag=IY40_RS20370;old_locus_tag=IY40_20725 NZ_JPQY01000036.1 Protein Homology CDS 10382 11926 . + 0 ID=cds-WP_043142923.1;Parent=gene-IY40_RS20370;Dbxref=GenBank:WP_043142923.1;Name=WP_043142923.1;Ontology_term=GO:0009097,GO:0004794;gbkey=CDS;gene=ilvA;go_function=threonine deaminase activity|0004794||IEA;go_process=isoleucine biosynthetic process|0009097||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010294667.1;locus_tag=IY40_RS20370;product=threonine ammonia-lyase%2C biosynthetic;protein_id=WP_043142923.1;transl_table=11 NZ_JPQY01000036.1 RefSeq gene 12039 13034 . + . ID=gene-IY40_RS20375;Name=IY40_RS20375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS20375;old_locus_tag=IY40_20730 NZ_JPQY01000036.1 Protein Homology CDS 12039 13034 . + 0 ID=cds-WP_025304642.1;Parent=gene-IY40_RS20375;Dbxref=GenBank:WP_025304642.1;Name=WP_025304642.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004929965.1;locus_tag=IY40_RS20375;product=hypothetical protein;protein_id=WP_025304642.1;transl_table=11 NZ_JPQY01000036.1 RefSeq gene 13034 13612 . + . ID=gene-IY40_RS20380;Name=IY40_RS20380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS20380;old_locus_tag=IY40_20735 NZ_JPQY01000036.1 Protein Homology CDS 13034 13612 . + 0 ID=cds-WP_025304641.1;Parent=gene-IY40_RS20380;Dbxref=GenBank:WP_025304641.1;Name=WP_025304641.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016930471.1;locus_tag=IY40_RS20380;product=hypothetical protein;protein_id=WP_025304641.1;transl_table=11 NZ_JPQY01000036.1 RefSeq gene 13634 14335 . + . ID=gene-IY40_RS20385;Name=IY40_RS20385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS20385;old_locus_tag=IY40_20740 NZ_JPQY01000036.1 Protein Homology CDS 13634 14335 . + 0 ID=cds-WP_025304640.1;Parent=gene-IY40_RS20385;Dbxref=GenBank:WP_025304640.1;Name=WP_025304640.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004929969.1;locus_tag=IY40_RS20385;product=DUF2461 domain-containing protein;protein_id=WP_025304640.1;transl_table=11 NZ_JPQY01000036.1 RefSeq gene 14345 15235 . - . ID=gene-IY40_RS20390;Name=ilvY;gbkey=Gene;gene=ilvY;gene_biotype=protein_coding;locus_tag=IY40_RS20390;old_locus_tag=IY40_20745 NZ_JPQY01000036.1 Protein Homology CDS 14345 15235 . - 0 ID=cds-WP_004929971.1;Parent=gene-IY40_RS20390;Dbxref=GenBank:WP_004929971.1;Name=WP_004929971.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=ilvY;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004929971.1;locus_tag=IY40_RS20390;product=HTH-type transcriptional activator IlvY;protein_id=WP_004929971.1;transl_table=11 NZ_JPQY01000036.1 RefSeq gene 15404 16879 . + . ID=gene-IY40_RS20395;Name=ilvC;gbkey=Gene;gene=ilvC;gene_biotype=protein_coding;locus_tag=IY40_RS20395;old_locus_tag=IY40_20750 NZ_JPQY01000036.1 Protein Homology CDS 15404 16879 . + 0 ID=cds-WP_025304638.1;Parent=gene-IY40_RS20395;Dbxref=GenBank:WP_025304638.1;Name=WP_025304638.1;Ontology_term=GO:0009082,GO:0004455;gbkey=CDS;gene=ilvC;go_function=ketol-acid reductoisomerase activity|0004455||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133363.1;locus_tag=IY40_RS20395;product=ketol-acid reductoisomerase;protein_id=WP_025304638.1;transl_table=11 NZ_JPQY01000036.1 RefSeq gene 16927 17628 . - . ID=gene-IY40_RS20400;Name=IY40_RS20400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS20400;old_locus_tag=IY40_20755 NZ_JPQY01000036.1 Protein Homology CDS 16927 17628 . - 0 ID=cds-WP_043142927.1;Parent=gene-IY40_RS20400;Dbxref=GenBank:WP_043142927.1;Name=WP_043142927.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004929976.1;locus_tag=IY40_RS20400;product=LuxR family transcriptional regulator;protein_id=WP_043142927.1;transl_table=11 NZ_JPQY01000036.1 RefSeq gene 17864 18799 . - . ID=gene-IY40_RS20405;Name=kdgK;gbkey=Gene;gene=kdgK;gene_biotype=protein_coding;locus_tag=IY40_RS20405;old_locus_tag=IY40_20760 NZ_JPQY01000036.1 Protein Homology CDS 17864 18799 . - 0 ID=cds-WP_043142931.1;Parent=gene-IY40_RS20405;Dbxref=GenBank:WP_043142931.1;Name=WP_043142931.1;Ontology_term=GO:0000166,GO:0005524,GO:0008673;gbkey=CDS;gene=kdgK;go_function=nucleotide binding|0000166||IEA,ATP binding|0005524||IEA,2-dehydro-3-deoxygluconokinase activity|0008673||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015848367.1;locus_tag=IY40_RS20405;product=2-dehydro-3-deoxygluconokinase;protein_id=WP_043142931.1;transl_table=11 NZ_JPQY01000036.1 RefSeq gene 19038 19829 . + . ID=gene-IY40_RS20410;Name=pdeH;gbkey=Gene;gene=pdeH;gene_biotype=protein_coding;locus_tag=IY40_RS20410;old_locus_tag=IY40_20765 NZ_JPQY01000036.1 Protein Homology CDS 19038 19829 . + 0 ID=cds-WP_043142934.1;Parent=gene-IY40_RS20410;Dbxref=GenBank:WP_043142934.1;Name=WP_043142934.1;gbkey=CDS;gene=pdeH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016930466.1;locus_tag=IY40_RS20410;product=cyclic-guanylate-specific phosphodiesterase;protein_id=WP_043142934.1;transl_table=11 NZ_JPQY01000036.1 RefSeq gene 19920 21959 . + . ID=gene-IY40_RS20415;Name=IY40_RS20415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS20415;old_locus_tag=IY40_20770 NZ_JPQY01000036.1 Protein Homology CDS 19920 21959 . + 0 ID=cds-WP_043142937.1;Parent=gene-IY40_RS20415;Dbxref=GenBank:WP_043142937.1;Name=WP_043142937.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004951690.1;locus_tag=IY40_RS20415;product=AsmA family protein;protein_id=WP_043142937.1;transl_table=11 NZ_JPQY01000036.1 RefSeq gene 21960 22727 . - . ID=gene-IY40_RS20420;Name=IY40_RS20420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS20420;old_locus_tag=IY40_20775 NZ_JPQY01000036.1 Protein Homology CDS 21960 22727 . - 0 ID=cds-WP_043142940.1;Parent=gene-IY40_RS20420;Dbxref=GenBank:WP_043142940.1;Name=WP_043142940.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015379387.1;locus_tag=IY40_RS20420;product=CDP-diacylglycerol diphosphatase;protein_id=WP_043142940.1;transl_table=11 NZ_JPQY01000036.1 RefSeq gene 22828 24150 . - . ID=gene-IY40_RS20425;Name=IY40_RS20425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS20425;old_locus_tag=IY40_20780 NZ_JPQY01000036.1 Protein Homology CDS 22828 24150 . - 0 ID=cds-WP_043142943.1;Parent=gene-IY40_RS20425;Dbxref=GenBank:WP_043142943.1;Name=WP_043142943.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004929985.1;locus_tag=IY40_RS20425;product=MFS transporter;protein_id=WP_043142943.1;transl_table=11 NZ_JPQY01000036.1 RefSeq gene 24480 25499 . - . ID=gene-IY40_RS20430;Name=yhjD;gbkey=Gene;gene=yhjD;gene_biotype=protein_coding;locus_tag=IY40_RS20430;old_locus_tag=IY40_20785 NZ_JPQY01000036.1 Protein Homology CDS 24480 25499 . - 0 ID=cds-WP_025304632.1;Parent=gene-IY40_RS20430;Dbxref=GenBank:WP_025304632.1;Name=WP_025304632.1;gbkey=CDS;gene=yhjD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006328769.1;locus_tag=IY40_RS20430;product=inner membrane protein YhjD;protein_id=WP_025304632.1;transl_table=11 NZ_JPQY01000036.1 RefSeq gene 25841 26707 . + . ID=gene-IY40_RS20435;Name=IY40_RS20435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS20435;old_locus_tag=IY40_20790 NZ_JPQY01000036.1 Protein Homology CDS 25841 26707 . + 0 ID=cds-WP_025304631.1;Parent=gene-IY40_RS20435;Dbxref=GenBank:WP_025304631.1;Name=WP_025304631.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006328758.1;locus_tag=IY40_RS20435;product=crotonase/enoyl-CoA hydratase family protein;protein_id=WP_025304631.1;transl_table=11 NZ_JPQY01000036.1 RefSeq gene 26724 28718 . - . ID=gene-IY40_RS20440;Name=pdeR;gbkey=Gene;gene=pdeR;gene_biotype=protein_coding;locus_tag=IY40_RS20440;old_locus_tag=IY40_20795 NZ_JPQY01000036.1 Protein Homology CDS 26724 28718 . - 0 ID=cds-WP_043142947.1;Parent=gene-IY40_RS20440;Dbxref=GenBank:WP_043142947.1;Name=WP_043142947.1;gbkey=CDS;gene=pdeR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015379385.1;locus_tag=IY40_RS20440;product=cyclic di-GMP phosphodiesterase;protein_id=WP_043142947.1;transl_table=11 NZ_JPQY01000036.1 RefSeq gene 29255 29746 . + . ID=gene-IY40_RS20445;Name=spy;gbkey=Gene;gene=spy;gene_biotype=protein_coding;locus_tag=IY40_RS20445;old_locus_tag=IY40_20800 NZ_JPQY01000036.1 Protein Homology CDS 29255 29746 . + 0 ID=cds-WP_043142950.1;Parent=gene-IY40_RS20445;Dbxref=GenBank:WP_043142950.1;Name=WP_043142950.1;Ontology_term=GO:0042597;gbkey=CDS;gene=spy;go_component=periplasmic space|0042597||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013814956.1;locus_tag=IY40_RS20445;product=ATP-independent periplasmic protein-refolding chaperone Spy;protein_id=WP_043142950.1;transl_table=11 NZ_JPQY01000036.1 RefSeq gene 29841 31058 . - . ID=gene-IY40_RS20450;Name=IY40_RS20450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS20450;old_locus_tag=IY40_20805 NZ_JPQY01000036.1 Protein Homology CDS 29841 31058 . - 0 ID=cds-WP_043142954.1;Parent=gene-IY40_RS20450;Dbxref=GenBank:WP_043142954.1;Name=WP_043142954.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015379383.1;locus_tag=IY40_RS20450;product=Tm-1-like ATP-binding domain-containing protein;protein_id=WP_043142954.1;transl_table=11 NZ_JPQY01000036.1 RefSeq gene 31323 31961 . + . ID=gene-IY40_RS20455;Name=IY40_RS20455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS20455;old_locus_tag=IY40_20810 NZ_JPQY01000036.1 Protein Homology CDS 31323 31961 . + 0 ID=cds-WP_038630005.1;Parent=gene-IY40_RS20455;Dbxref=GenBank:WP_038630005.1;Name=WP_038630005.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015379382.1;locus_tag=IY40_RS20455;product=TetR/AcrR family transcriptional regulator;protein_id=WP_038630005.1;transl_table=11 NZ_JPQY01000036.1 RefSeq gene 32440 35182 . + . ID=gene-IY40_RS20460;Name=IY40_RS20460;end_range=35182,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS20460;old_locus_tag=IY40_20815;partial=true NZ_JPQY01000036.1 Protein Homology CDS 32440 35182 . + 0 ID=cds-WP_043142959.1;Parent=gene-IY40_RS20460;Dbxref=GenBank:WP_043142959.1;Name=WP_043142959.1;Ontology_term=GO:0019867;end_range=35182,.;gbkey=CDS;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012147412.1;locus_tag=IY40_RS20460;partial=true;product=autotransporter serine protease;protein_id=WP_043142959.1;transl_table=11 ##sequence-region NZ_JPQY01000037.1 1 92354 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=615 NZ_JPQY01000037.1 RefSeq region 1 92354 . + . ID=NZ_JPQY01000037.1:1..92354;Dbxref=taxon:615;collected-by=Mahloro H. Serepa%3B Vincent M. Gray;collection-date=2013-04-11;country=South Africa: North West Province;gbkey=Src;genome=genomic;identified-by=Mahloro H. Serepa%3B Vincent M. Gray;isolation-source=entomopathogenic nematode Oscheius sp. MCB living in soil;mol_type=genomic DNA;nat-host=Oscheius sp. MCB;strain=MCB NZ_JPQY01000037.1 RefSeq gene 262 906 . - . ID=gene-IY40_RS20465;Name=IY40_RS20465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS20465;old_locus_tag=IY40_20820 NZ_JPQY01000037.1 Protein Homology CDS 262 906 . - 0 ID=cds-WP_015378089.1;Parent=gene-IY40_RS20465;Dbxref=GenBank:WP_015378089.1;Name=WP_015378089.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013575947.1;locus_tag=IY40_RS20465;product=YchE family NAAT transporter;protein_id=WP_015378089.1;transl_table=11 NZ_JPQY01000037.1 RefSeq gene 1438 4110 . + . ID=gene-IY40_RS20470;Name=adhE;gbkey=Gene;gene=adhE;gene_biotype=protein_coding;gene_synonym=adhC;locus_tag=IY40_RS20470;old_locus_tag=IY40_20825 NZ_JPQY01000037.1 Protein Homology CDS 1438 4110 . + 0 ID=cds-WP_025303076.1;Parent=gene-IY40_RS20470;Dbxref=GenBank:WP_025303076.1;Name=WP_025303076.1;Ontology_term=GO:0006066,GO:0015976,GO:0004022,GO:0016620,GO:0046872;gbkey=CDS;gene=adhE;go_function=alcohol dehydrogenase (NAD+) activity|0004022||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA,metal ion binding|0046872||IEA;go_process=alcohol metabolic process|0006066||IEA,carbon utilization|0015976||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002416549.1;locus_tag=IY40_RS20470;product=bifunctional acetaldehyde-CoA/alcohol dehydrogenase;protein_id=WP_025303076.1;transl_table=11 NZ_JPQY01000037.1 RefSeq gene 4230 4814 . - . ID=gene-IY40_RS20475;Name=IY40_RS20475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS20475;old_locus_tag=IY40_20830 NZ_JPQY01000037.1 Protein Homology CDS 4230 4814 . - 0 ID=cds-WP_015378091.1;Parent=gene-IY40_RS20475;Dbxref=GenBank:WP_015378091.1;Name=WP_015378091.1;Ontology_term=GO:0004797,GO:0005524;gbkey=CDS;go_function=thymidine kinase activity|0004797||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004945324.1;locus_tag=IY40_RS20475;product=thymidine kinase;protein_id=WP_015378091.1;transl_table=11 NZ_JPQY01000037.1 RefSeq gene 5515 5922 . + . ID=gene-IY40_RS20480;Name=hns;gbkey=Gene;gene=hns;gene_biotype=protein_coding;locus_tag=IY40_RS20480;old_locus_tag=IY40_20835 NZ_JPQY01000037.1 Protein Homology CDS 5515 5922 . + 0 ID=cds-WP_004932170.1;Parent=gene-IY40_RS20480;Dbxref=GenBank:WP_004932170.1;Name=WP_004932170.1;Ontology_term=GO:0071824,GO:0003677;gbkey=CDS;gene=hns;go_function=DNA binding|0003677||IEA;go_process=protein-DNA complex organization|0071824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227498.1;locus_tag=IY40_RS20480;product=histone-like nucleoid-structuring protein H-NS;protein_id=WP_004932170.1;transl_table=11 NZ_JPQY01000037.1 RefSeq gene 6109 7119 . - . ID=gene-IY40_RS20485;Name=IY40_RS20485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS20485;old_locus_tag=IY40_20840 NZ_JPQY01000037.1 Protein Homology CDS 6109 7119 . - 0 ID=cds-WP_025303077.1;Parent=gene-IY40_RS20485;Dbxref=GenBank:WP_025303077.1;Name=WP_025303077.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013813210.1;locus_tag=IY40_RS20485;product=NAD-dependent epimerase;protein_id=WP_025303077.1;transl_table=11 NZ_JPQY01000037.1 RefSeq gene 7129 8472 . - . ID=gene-IY40_RS20490;Name=IY40_RS20490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS20490;old_locus_tag=IY40_20845 NZ_JPQY01000037.1 Protein Homology CDS 7129 8472 . - 0 ID=cds-WP_025303078.1;Parent=gene-IY40_RS20490;Dbxref=GenBank:WP_025303078.1;Name=WP_025303078.1;Ontology_term=GO:0016616;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004962347.1;locus_tag=IY40_RS20490;product=UDP-glucose dehydrogenase family protein;protein_id=WP_025303078.1;transl_table=11 NZ_JPQY01000037.1 RefSeq gene 8513 9430 . - . ID=gene-IY40_RS20495;Name=galU;gbkey=Gene;gene=galU;gene_biotype=protein_coding;locus_tag=IY40_RS20495;old_locus_tag=IY40_20850 NZ_JPQY01000037.1 Protein Homology CDS 8513 9430 . - 0 ID=cds-WP_025303079.1;Parent=gene-IY40_RS20495;Dbxref=GenBank:WP_025303079.1;Name=WP_025303079.1;gbkey=CDS;gene=galU;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015840214.1;locus_tag=IY40_RS20495;product=UTP--glucose-1-phosphate uridylyltransferase GalU;protein_id=WP_025303079.1;transl_table=11 NZ_JPQY01000037.1 RefSeq gene 9643 10656 . - . ID=gene-IY40_RS20500;Name=rssB;gbkey=Gene;gene=rssB;gene_biotype=protein_coding;locus_tag=IY40_RS20500;old_locus_tag=IY40_20855 NZ_JPQY01000037.1 Protein Homology CDS 9643 10656 . - 0 ID=cds-WP_025303080.1;Parent=gene-IY40_RS20500;Dbxref=GenBank:WP_025303080.1;Name=WP_025303080.1;Ontology_term=GO:0000160;gbkey=CDS;gene=rssB;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015672556.1;locus_tag=IY40_RS20500;product=two-component system response regulator RssB;protein_id=WP_025303080.1;transl_table=11 NZ_JPQY01000037.1 RefSeq gene 10760 11662 . - . ID=gene-IY40_RS20505;Name=rssA;gbkey=Gene;gene=rssA;gene_biotype=protein_coding;locus_tag=IY40_RS20505;old_locus_tag=IY40_20860 NZ_JPQY01000037.1 Protein Homology CDS 10760 11662 . - 0 ID=cds-WP_043142971.1;Parent=gene-IY40_RS20505;Dbxref=GenBank:WP_043142971.1;Name=WP_043142971.1;Ontology_term=GO:0006629,GO:0004622;gbkey=CDS;gene=rssA;go_function=phosphatidylcholine lysophospholipase activity|0004622||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006325796.1;locus_tag=IY40_RS20505;product=patatin-like phospholipase RssA;protein_id=WP_043142971.1;transl_table=11 NZ_JPQY01000037.1 RefSeq gene 11781 12245 . + . ID=gene-IY40_RS20510;Name=IY40_RS20510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS20510;old_locus_tag=IY40_20865 NZ_JPQY01000037.1 Protein Homology CDS 11781 12245 . + 0 ID=cds-WP_043142974.1;Parent=gene-IY40_RS20510;Dbxref=GenBank:WP_043142974.1;Name=WP_043142974.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210666.1;locus_tag=IY40_RS20510;product=YchJ family protein;protein_id=WP_043142974.1;transl_table=11 NZ_JPQY01000037.1 RefSeq gene 12314 13162 . + . ID=gene-IY40_RS20515;Name=purU;gbkey=Gene;gene=purU;gene_biotype=protein_coding;locus_tag=IY40_RS20515;old_locus_tag=IY40_20870 NZ_JPQY01000037.1 Protein Homology CDS 12314 13162 . + 0 ID=cds-WP_004932187.1;Parent=gene-IY40_RS20515;Dbxref=GenBank:WP_004932187.1;Name=WP_004932187.1;Ontology_term=GO:0006189,GO:0008864;gbkey=CDS;gene=purU;go_function=formyltetrahydrofolate deformylase activity|0008864||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002230891.1;locus_tag=IY40_RS20515;product=formyltetrahydrofolate deformylase;protein_id=WP_004932187.1;transl_table=11 NZ_JPQY01000037.1 RefSeq gene 13338 13422 . + . ID=gene-IY40_RS20520;Name=IY40_RS20520;gbkey=Gene;gene_biotype=tRNA;locus_tag=IY40_RS20520;old_locus_tag=IY40_20875 NZ_JPQY01000037.1 tRNAscan-SE tRNA 13338 13422 . + . ID=rna-IY40_RS20520;Parent=gene-IY40_RS20520;anticodon=(pos:13372..13374);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=IY40_RS20520;product=tRNA-Tyr NZ_JPQY01000037.1 tRNAscan-SE exon 13338 13422 . + . ID=exon-IY40_RS20520-1;Parent=rna-IY40_RS20520;anticodon=(pos:13372..13374);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=IY40_RS20520;product=tRNA-Tyr NZ_JPQY01000037.1 RefSeq gene 13612 13696 . + . ID=gene-IY40_RS20525;Name=IY40_RS20525;gbkey=Gene;gene_biotype=tRNA;locus_tag=IY40_RS20525;old_locus_tag=IY40_20880 NZ_JPQY01000037.1 tRNAscan-SE tRNA 13612 13696 . + . ID=rna-IY40_RS20525;Parent=gene-IY40_RS20525;anticodon=(pos:13646..13648);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=IY40_RS20525;product=tRNA-Tyr NZ_JPQY01000037.1 tRNAscan-SE exon 13612 13696 . + . ID=exon-IY40_RS20525-1;Parent=rna-IY40_RS20525;anticodon=(pos:13646..13648);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=IY40_RS20525;product=tRNA-Tyr NZ_JPQY01000037.1 RefSeq gene 13743 13870 . + . ID=gene-IY40_RS24870;Name=IY40_RS24870;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IY40_RS24870;old_locus_tag=IY40_21285 NZ_JPQY01000037.1 cmsearch ncRNA 13743 13870 . + . ID=rna-IY40_RS24870;Parent=gene-IY40_RS24870;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=IY40_RS24870;product=RtT sRNA NZ_JPQY01000037.1 cmsearch exon 13743 13870 . + . ID=exon-IY40_RS24870-1;Parent=rna-IY40_RS24870;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=IY40_RS24870;product=RtT sRNA NZ_JPQY01000037.1 RefSeq gene 14139 14711 . + . ID=gene-IY40_RS20530;Name=IY40_RS20530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS20530;old_locus_tag=IY40_20885 NZ_JPQY01000037.1 Protein Homology CDS 14139 14711 . + 0 ID=cds-WP_043142977.1;Parent=gene-IY40_RS20530;Dbxref=GenBank:WP_043142977.1;Name=WP_043142977.1;Ontology_term=GO:0009691,GO:0016799;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing N-glycosyl compounds|0016799||IEA;go_process=cytokinin biosynthetic process|0009691||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017893058.1;locus_tag=IY40_RS20530;product=LOG family protein;protein_id=WP_043142977.1;transl_table=11 NZ_JPQY01000037.1 RefSeq gene 14813 15619 . + . ID=gene-IY40_RS20535;Name=xthA;gbkey=Gene;gene=xthA;gene_biotype=protein_coding;locus_tag=IY40_RS20535;old_locus_tag=IY40_20890 NZ_JPQY01000037.1 Protein Homology CDS 14813 15619 . + 0 ID=cds-WP_025303083.1;Parent=gene-IY40_RS20535;Dbxref=GenBank:WP_025303083.1;Name=WP_025303083.1;Ontology_term=GO:0006281,GO:0003677,GO:0004519,GO:0008311;gbkey=CDS;gene=xthA;go_function=DNA binding|0003677||IEA,endonuclease activity|0004519||IEA,double-stranded DNA 3'-5' DNA exonuclease activity|0008311||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017893059.1;locus_tag=IY40_RS20535;product=exodeoxyribonuclease III;protein_id=WP_025303083.1;transl_table=11 NZ_JPQY01000037.1 RefSeq gene 15664 16065 . + . ID=gene-IY40_RS20540;Name=IY40_RS20540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS20540;old_locus_tag=IY40_20895 NZ_JPQY01000037.1 Protein Homology CDS 15664 16065 . + 0 ID=cds-WP_043142981.1;Parent=gene-IY40_RS20540;Dbxref=GenBank:WP_043142981.1;Name=WP_043142981.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016927483.1;locus_tag=IY40_RS20540;product=pyrimidine (deoxy)nucleoside triphosphate diphosphatase;protein_id=WP_043142981.1;transl_table=11 NZ_JPQY01000037.1 RefSeq gene 16087 16383 . - . ID=gene-IY40_RS20545;Name=IY40_RS20545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS20545;old_locus_tag=IY40_20900 NZ_JPQY01000037.1 Protein Homology CDS 16087 16383 . - 0 ID=cds-WP_025303085.1;Parent=gene-IY40_RS20545;Dbxref=GenBank:WP_025303085.1;Name=WP_025303085.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004932195.1;locus_tag=IY40_RS20545;product=YnjH family protein;protein_id=WP_025303085.1;transl_table=11 NZ_JPQY01000037.1 RefSeq gene 16380 18305 . - . ID=gene-IY40_RS20550;Name=IY40_RS20550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS20550;old_locus_tag=IY40_20905 NZ_JPQY01000037.1 Protein Homology CDS 16380 18305 . - 0 ID=cds-WP_043142985.1;Parent=gene-IY40_RS20550;Dbxref=GenBank:WP_043142985.1;Name=WP_043142985.1;Ontology_term=GO:0006261,GO:0006265,GO:0006310,GO:0051304,GO:0003677,GO:0003916,GO:0003917,GO:0098847;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA topoisomerase activity|0003916||IEA,DNA topoisomerase type I (single strand cut%2C ATP-independent) activity|0003917||IEA,sequence-specific single stranded DNA binding|0098847||IEA;go_process=DNA-templated DNA replication|0006261||IEA,DNA topological change|0006265||IEA,DNA recombination|0006310||IEA,chromosome separation|0051304||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004945367.1;locus_tag=IY40_RS20550;product=DNA topoisomerase III;protein_id=WP_043142985.1;transl_table=11 NZ_JPQY01000037.1 RefSeq gene 18305 19414 . - . ID=gene-IY40_RS20555;Name=mnmH;gbkey=Gene;gene=mnmH;gene_biotype=protein_coding;locus_tag=IY40_RS20555;old_locus_tag=IY40_20910 NZ_JPQY01000037.1 Protein Homology CDS 18305 19414 . - 0 ID=cds-WP_043142988.1;Parent=gene-IY40_RS20555;Dbxref=GenBank:WP_043142988.1;Name=WP_043142988.1;Ontology_term=GO:0002098,GO:0043828;gbkey=CDS;gene=mnmH;go_function=tRNA 2-selenouridine synthase activity|0043828||IEA;go_process=tRNA wobble uridine modification|0002098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015672565.1;locus_tag=IY40_RS20555;product=tRNA 2-selenouridine(34) synthase MnmH;protein_id=WP_043142988.1;transl_table=11 NZ_JPQY01000037.1 RefSeq gene 19423 20466 . - . ID=gene-IY40_RS20560;Name=selD;gbkey=Gene;gene=selD;gene_biotype=protein_coding;locus_tag=IY40_RS20560;old_locus_tag=IY40_20915 NZ_JPQY01000037.1 Protein Homology CDS 19423 20466 . - 0 ID=cds-WP_025303088.1;Parent=gene-IY40_RS20560;Dbxref=GenBank:WP_025303088.1;Name=WP_025303088.1;Ontology_term=GO:0016260,GO:0004756;gbkey=CDS;gene=selD;go_function=selenide%2C water dikinase activity|0004756||IEA;go_process=selenocysteine biosynthetic process|0016260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017893063.1;locus_tag=IY40_RS20560;product=selenide%2C water dikinase SelD;protein_id=WP_025303088.1;transl_table=11 NZ_JPQY01000037.1 RefSeq gene 20624 21175 . - . ID=gene-IY40_RS20565;Name=IY40_RS20565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS20565;old_locus_tag=IY40_20920 NZ_JPQY01000037.1 Protein Homology CDS 20624 21175 . - 0 ID=cds-WP_004932204.1;Parent=gene-IY40_RS20565;Dbxref=GenBank:WP_004932204.1;Name=WP_004932204.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304095.1;locus_tag=IY40_RS20565;product=NAD(P)H nitroreductase;protein_id=WP_004932204.1;transl_table=11 NZ_JPQY01000037.1 RefSeq gene 21336 23192 . + . ID=gene-IY40_RS20570;Name=sppA;gbkey=Gene;gene=sppA;gene_biotype=protein_coding;locus_tag=IY40_RS20570;old_locus_tag=IY40_20925 NZ_JPQY01000037.1 Protein Homology CDS 21336 23192 . + 0 ID=cds-WP_025303089.1;Parent=gene-IY40_RS20570;Dbxref=GenBank:WP_025303089.1;Name=WP_025303089.1;Ontology_term=GO:0006465,GO:0008233;gbkey=CDS;gene=sppA;go_function=peptidase activity|0008233||IEA;go_process=signal peptide processing|0006465||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019083189.1;locus_tag=IY40_RS20570;product=signal peptide peptidase SppA;protein_id=WP_025303089.1;transl_table=11 NZ_JPQY01000037.1 RefSeq gene 23286 24302 . + . ID=gene-IY40_RS20575;Name=ansA;gbkey=Gene;gene=ansA;gene_biotype=protein_coding;locus_tag=IY40_RS20575;old_locus_tag=IY40_20930 NZ_JPQY01000037.1 Protein Homology CDS 23286 24302 . + 0 ID=cds-WP_025303090.1;Parent=gene-IY40_RS20575;Dbxref=GenBank:WP_025303090.1;Name=WP_025303090.1;Ontology_term=GO:0006520,GO:0004067;gbkey=CDS;gene=ansA;go_function=asparaginase activity|0004067||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013813225.1;locus_tag=IY40_RS20575;product=asparaginase;protein_id=WP_025303090.1;transl_table=11 NZ_JPQY01000037.1 RefSeq gene 24325 24957 . + . ID=gene-IY40_RS20580;Name=pncA;gbkey=Gene;gene=pncA;gene_biotype=protein_coding;locus_tag=IY40_RS20580;old_locus_tag=IY40_20935 NZ_JPQY01000037.1 Protein Homology CDS 24325 24957 . + 0 ID=cds-WP_043142991.1;Parent=gene-IY40_RS20580;Dbxref=GenBank:WP_043142991.1;Name=WP_043142991.1;gbkey=CDS;gene=pncA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006322608.1;locus_tag=IY40_RS20580;product=bifunctional nicotinamidase/pyrazinamidase;protein_id=WP_043142991.1;transl_table=11 NZ_JPQY01000037.1 RefSeq gene 25191 26468 . + . ID=gene-IY40_RS20585;Name=IY40_RS20585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS20585;old_locus_tag=IY40_20940 NZ_JPQY01000037.1 Protein Homology CDS 25191 26468 . + 0 ID=cds-WP_043142993.1;Parent=gene-IY40_RS20585;Dbxref=GenBank:WP_043142993.1;Name=WP_043142993.1;Ontology_term=GO:0005975,GO:0004568,GO:0008061,GO:0016798;gbkey=CDS;go_function=chitinase activity|0004568||IEA,chitin binding|0008061||IEA,hydrolase activity%2C acting on glycosyl bonds|0016798||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015378101.1;locus_tag=IY40_RS20585;product=glycoside hydrolase family 18 protein;protein_id=WP_043142993.1;transl_table=11 NZ_JPQY01000037.1 RefSeq gene 26511 26783 . - . ID=gene-IY40_RS20590;Name=IY40_RS20590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS20590;old_locus_tag=IY40_20945 NZ_JPQY01000037.1 Protein Homology CDS 26511 26783 . - 0 ID=cds-WP_025303093.1;Parent=gene-IY40_RS20590;Dbxref=GenBank:WP_025303093.1;Name=WP_025303093.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005162905.1;locus_tag=IY40_RS20590;product=YeaC family protein;protein_id=WP_025303093.1;transl_table=11 NZ_JPQY01000037.1 RefSeq gene 26847 27260 . - . ID=gene-IY40_RS20595;Name=msrB;gbkey=Gene;gene=msrB;gene_biotype=protein_coding;locus_tag=IY40_RS20595;old_locus_tag=IY40_20950 NZ_JPQY01000037.1 Protein Homology CDS 26847 27260 . - 0 ID=cds-WP_004932219.1;Parent=gene-IY40_RS20595;Dbxref=GenBank:WP_004932219.1;Name=WP_004932219.1;Ontology_term=GO:0006979,GO:0030091,GO:0033743;gbkey=CDS;gene=msrB;go_function=peptide-methionine (R)-S-oxide reductase activity|0033743||IEA;go_process=response to oxidative stress|0006979||IEA,protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004715275.1;locus_tag=IY40_RS20595;product=peptide-methionine (R)-S-oxide reductase MsrB;protein_id=WP_004932219.1;transl_table=11 NZ_JPQY01000037.1 RefSeq gene 27609 28604 . + . ID=gene-IY40_RS20600;Name=gapA;gbkey=Gene;gene=gapA;gene_biotype=protein_coding;locus_tag=IY40_RS20600;old_locus_tag=IY40_20955 NZ_JPQY01000037.1 Protein Homology CDS 27609 28604 . + 0 ID=cds-WP_004932222.1;Parent=gene-IY40_RS20600;Dbxref=GenBank:WP_004932222.1;Name=WP_004932222.1;gbkey=CDS;gene=gapA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006322611.1;locus_tag=IY40_RS20600;product=glyceraldehyde-3-phosphate dehydrogenase;protein_id=WP_004932222.1;transl_table=11 NZ_JPQY01000037.1 RefSeq gene 28688 29563 . + . ID=gene-IY40_RS20605;Name=IY40_RS20605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS20605;old_locus_tag=IY40_20960 NZ_JPQY01000037.1 Protein Homology CDS 28688 29563 . + 0 ID=cds-WP_025303094.1;Parent=gene-IY40_RS20605;Dbxref=GenBank:WP_025303094.1;Name=WP_025303094.1;Ontology_term=GO:0005975,GO:0016857;gbkey=CDS;go_function=racemase and epimerase activity%2C acting on carbohydrates and derivatives|0016857||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006325816.1;locus_tag=IY40_RS20605;product=D-hexose-6-phosphate mutarotase;protein_id=WP_025303094.1;transl_table=11 NZ_JPQY01000037.1 RefSeq gene 29658 30422 . - . ID=gene-IY40_RS20610;Name=IY40_RS20610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS20610;old_locus_tag=IY40_20965 NZ_JPQY01000037.1 Protein Homology CDS 29658 30422 . - 0 ID=cds-WP_025303095.1;Parent=gene-IY40_RS20610;Dbxref=GenBank:WP_025303095.1;Name=WP_025303095.1;Ontology_term=GO:0009252,GO:0030674,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=protein-macromolecule adaptor activity|0030674||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004945397.1;locus_tag=IY40_RS20610;product=MipA/OmpV family protein;protein_id=WP_025303095.1;transl_table=11 NZ_JPQY01000037.1 RefSeq gene 30531 30806 . - . ID=gene-IY40_RS26250;Name=IY40_RS26250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS26250 NZ_JPQY01000037.1 GeneMarkS-2+ CDS 30531 30806 . - 0 ID=cds-WP_160310831.1;Parent=gene-IY40_RS26250;Dbxref=GenBank:WP_160310831.1;Name=WP_160310831.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IY40_RS26250;product=hypothetical protein;protein_id=WP_160310831.1;transl_table=11 NZ_JPQY01000037.1 RefSeq gene 30849 32783 . + . ID=gene-IY40_RS20615;Name=yeaG;gbkey=Gene;gene=yeaG;gene_biotype=protein_coding;locus_tag=IY40_RS20615;old_locus_tag=IY40_20970 NZ_JPQY01000037.1 Protein Homology CDS 30849 32783 . + 0 ID=cds-WP_043142996.1;Parent=gene-IY40_RS20615;Dbxref=GenBank:WP_043142996.1;Name=WP_043142996.1;gbkey=CDS;gene=yeaG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011411173.1;locus_tag=IY40_RS20615;product=protein kinase YeaG;protein_id=WP_043142996.1;transl_table=11 NZ_JPQY01000037.1 RefSeq gene 32916 34184 . + . ID=gene-IY40_RS20620;Name=IY40_RS20620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS20620;old_locus_tag=IY40_20975 NZ_JPQY01000037.1 Protein Homology CDS 32916 34184 . + 0 ID=cds-WP_004932234.1;Parent=gene-IY40_RS20620;Dbxref=GenBank:WP_004932234.1;Name=WP_004932234.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019452767.1;locus_tag=IY40_RS20620;product=YeaH/YhbH family protein;protein_id=WP_004932234.1;transl_table=11 NZ_JPQY01000037.1 RefSeq gene 34520 34750 . + . ID=gene-IY40_RS20625;Name=IY40_RS20625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS20625;old_locus_tag=IY40_20980 NZ_JPQY01000037.1 Protein Homology CDS 34520 34750 . + 0 ID=cds-WP_004932237.1;Parent=gene-IY40_RS20625;Dbxref=GenBank:WP_004932237.1;Name=WP_004932237.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019452768.1;locus_tag=IY40_RS20625;product=hypothetical protein;protein_id=WP_004932237.1;transl_table=11 NZ_JPQY01000037.1 RefSeq gene 34951 35640 . - . ID=gene-IY40_RS20630;Name=IY40_RS20630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS20630;old_locus_tag=IY40_20990 NZ_JPQY01000037.1 Protein Homology CDS 34951 35640 . - 0 ID=cds-WP_043142997.1;Parent=gene-IY40_RS20630;Dbxref=GenBank:WP_043142997.1;Name=WP_043142997.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019452770.1;locus_tag=IY40_RS20630;product=alpha/beta hydrolase;protein_id=WP_043142997.1;transl_table=11 NZ_JPQY01000037.1 RefSeq gene 36462 36638 . + . ID=gene-IY40_RS25495;Name=IY40_RS25495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS25495;old_locus_tag=IY40_21000 NZ_JPQY01000037.1 Protein Homology CDS 36462 36638 . + 0 ID=cds-WP_025303098.1;Parent=gene-IY40_RS25495;Dbxref=GenBank:WP_025303098.1;Name=WP_025303098.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015378105.1;locus_tag=IY40_RS25495;product=GhoT/OrtT family toxin;protein_id=WP_025303098.1;transl_table=11 NZ_JPQY01000037.1 RefSeq gene 36905 37198 . - . ID=gene-IY40_RS20640;Name=IY40_RS20640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS20640;old_locus_tag=IY40_21005 NZ_JPQY01000037.1 Protein Homology CDS 36905 37198 . - 0 ID=cds-WP_043142999.1;Parent=gene-IY40_RS20640;Dbxref=GenBank:WP_043142999.1;Name=WP_043142999.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015378107.1;locus_tag=IY40_RS20640;product=hypothetical protein;protein_id=WP_043142999.1;transl_table=11 NZ_JPQY01000037.1 RefSeq gene 37424 37906 . + . ID=gene-IY40_RS20645;Name=IY40_RS20645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS20645;old_locus_tag=IY40_21010 NZ_JPQY01000037.1 Protein Homology CDS 37424 37906 . + 0 ID=cds-WP_025303100.1;Parent=gene-IY40_RS20645;Dbxref=GenBank:WP_025303100.1;Name=WP_025303100.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004932246.1;locus_tag=IY40_RS20645;product=hypothetical protein;protein_id=WP_025303100.1;transl_table=11 NZ_JPQY01000037.1 RefSeq gene 38214 38768 . + . ID=gene-IY40_RS20655;Name=IY40_RS20655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS20655;old_locus_tag=IY40_21020 NZ_JPQY01000037.1 Protein Homology CDS 38214 38768 . + 0 ID=cds-WP_038629407.1;Parent=gene-IY40_RS20655;Dbxref=GenBank:WP_038629407.1;Name=WP_038629407.1;Ontology_term=GO:0003676,GO:0008408;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,3'-5' exonuclease activity|0008408||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004945437.1;locus_tag=IY40_RS20655;product=3'-5' exonuclease;protein_id=WP_038629407.1;transl_table=11 NZ_JPQY01000037.1 RefSeq gene 38852 40045 . + . ID=gene-IY40_RS20660;Name=IY40_RS20660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS20660;old_locus_tag=IY40_21025 NZ_JPQY01000037.1 Protein Homology CDS 38852 40045 . + 0 ID=cds-WP_043143001.1;Parent=gene-IY40_RS20660;Dbxref=GenBank:WP_043143001.1;Name=WP_043143001.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006325840.1;locus_tag=IY40_RS20660;product=multidrug effflux MFS transporter;protein_id=WP_043143001.1;transl_table=11 NZ_JPQY01000037.1 RefSeq gene 40054 41127 . - . ID=gene-IY40_RS20665;Name=dadX;gbkey=Gene;gene=dadX;gene_biotype=protein_coding;locus_tag=IY40_RS20665;old_locus_tag=IY40_21030 NZ_JPQY01000037.1 Protein Homology CDS 40054 41127 . - 0 ID=cds-WP_043143003.1;Parent=gene-IY40_RS20665;Dbxref=GenBank:WP_043143003.1;Name=WP_043143003.1;Ontology_term=GO:0006522,GO:0008784;gbkey=CDS;gene=dadX;go_function=alanine racemase activity|0008784||IEA;go_process=alanine metabolic process|0006522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013813246.1;locus_tag=IY40_RS20665;product=catabolic alanine racemase DadX;protein_id=WP_043143003.1;transl_table=11 NZ_JPQY01000037.1 RefSeq gene 41204 42508 . - . ID=gene-IY40_RS20670;Name=IY40_RS20670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS20670;old_locus_tag=IY40_21035 NZ_JPQY01000037.1 Protein Homology CDS 41204 42508 . - 0 ID=cds-WP_043143005.1;Parent=gene-IY40_RS20670;Dbxref=GenBank:WP_043143005.1;Name=WP_043143005.1;Ontology_term=GO:0055130,GO:0008718,GO:0016491,GO:0071949;gbkey=CDS;go_function=D-amino-acid dehydrogenase activity|0008718||IEA,oxidoreductase activity|0016491||IEA,FAD binding|0071949||IEA;go_process=D-alanine catabolic process|0055130||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005169245.1;locus_tag=IY40_RS20670;product=D-amino acid dehydrogenase;protein_id=WP_043143005.1;transl_table=11 NZ_JPQY01000037.1 RefSeq gene 43048 43365 . + . ID=gene-IY40_RS20675;Name=IY40_RS20675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS20675;old_locus_tag=IY40_21040 NZ_JPQY01000037.1 Protein Homology CDS 43048 43365 . + 0 ID=cds-WP_043143007.1;Parent=gene-IY40_RS20675;Dbxref=GenBank:WP_043143007.1;Name=WP_043143007.1;Ontology_term=GO:0017000,GO:0004497,GO:0016491;gbkey=CDS;go_function=monooxygenase activity|0004497||IEA,oxidoreductase activity|0016491||IEA;go_process=antibiotic biosynthetic process|0017000||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019452779.1;locus_tag=IY40_RS20675;product=antibiotic biosynthesis monooxygenase family protein;protein_id=WP_043143007.1;transl_table=11 NZ_JPQY01000037.1 RefSeq gene 43411 44061 . - . ID=gene-IY40_RS20680;Name=zinT;gbkey=Gene;gene=zinT;gene_biotype=protein_coding;locus_tag=IY40_RS20680;old_locus_tag=IY40_21045 NZ_JPQY01000037.1 Protein Homology CDS 43411 44061 . - 0 ID=cds-WP_043143011.1;Parent=gene-IY40_RS20680;Dbxref=GenBank:WP_043143011.1;Name=WP_043143011.1;Ontology_term=GO:0008270;gbkey=CDS;gene=zinT;go_function=zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004932265.1;locus_tag=IY40_RS20680;product=metal-binding protein ZinT;protein_id=WP_043143011.1;transl_table=11 NZ_JPQY01000037.1 RefSeq gene 44358 45893 . + . ID=gene-IY40_RS20685;Name=IY40_RS20685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS20685;old_locus_tag=IY40_21050 NZ_JPQY01000037.1 Protein Homology CDS 44358 45893 . + 0 ID=cds-WP_025303106.1;Parent=gene-IY40_RS20685;Dbxref=GenBank:WP_025303106.1;Name=WP_025303106.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192425.1;locus_tag=IY40_RS20685;product=SpoVR family protein;protein_id=WP_025303106.1;transl_table=11 NZ_JPQY01000037.1 RefSeq gene 45954 46673 . - . ID=gene-IY40_RS20690;Name=fadR;gbkey=Gene;gene=fadR;gene_biotype=protein_coding;locus_tag=IY40_RS20690;old_locus_tag=IY40_21055 NZ_JPQY01000037.1 Protein Homology CDS 45954 46673 . - 0 ID=cds-WP_025303107.1;Parent=gene-IY40_RS20690;Dbxref=GenBank:WP_025303107.1;Name=WP_025303107.1;Ontology_term=GO:0006355,GO:0019217,GO:0000062,GO:0003677,GO:0003700;gbkey=CDS;gene=fadR;go_function=fatty-acyl-CoA binding|0000062||IEA,DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,regulation of fatty acid metabolic process|0019217||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211688.1;locus_tag=IY40_RS20690;product=fatty acid metabolism transcriptional regulator FadR;protein_id=WP_025303107.1;transl_table=11 NZ_JPQY01000037.1 RefSeq gene 46916 48481 . + . ID=gene-IY40_RS20695;Name=nhaB;gbkey=Gene;gene=nhaB;gene_biotype=protein_coding;locus_tag=IY40_RS20695;old_locus_tag=IY40_21060 NZ_JPQY01000037.1 Protein Homology CDS 46916 48481 . + 0 ID=cds-WP_025303108.1;Parent=gene-IY40_RS20695;Dbxref=GenBank:WP_025303108.1;Name=WP_025303108.1;Ontology_term=GO:0006814,GO:0015385,GO:0016020;gbkey=CDS;gene=nhaB;go_component=membrane|0016020||IEA;go_function=sodium:proton antiporter activity|0015385||IEA;go_process=sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004945452.1;locus_tag=IY40_RS20695;product=sodium/proton antiporter NhaB;protein_id=WP_025303108.1;transl_table=11 NZ_JPQY01000037.1 RefSeq gene 48601 49131 . + . ID=gene-IY40_RS20700;Name=dsbB;gbkey=Gene;gene=dsbB;gene_biotype=protein_coding;locus_tag=IY40_RS20700;old_locus_tag=IY40_21065 NZ_JPQY01000037.1 Protein Homology CDS 48601 49131 . + 0 ID=cds-WP_004932277.1;Parent=gene-IY40_RS20700;Dbxref=GenBank:WP_004932277.1;Name=WP_004932277.1;Ontology_term=GO:0006457,GO:0015035,GO:0016020;gbkey=CDS;gene=dsbB;go_component=membrane|0016020||IEA;go_function=protein-disulfide reductase activity|0015035||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002227934.1;locus_tag=IY40_RS20700;product=disulfide bond formation protein DsbB;protein_id=WP_004932277.1;transl_table=11 NZ_JPQY01000037.1 RefSeq gene 49824 50585 . + . ID=gene-IY40_RS20705;Name=IY40_RS20705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS20705;old_locus_tag=IY40_21070 NZ_JPQY01000037.1 Protein Homology CDS 49824 50585 . + 0 ID=cds-WP_043143013.1;Parent=gene-IY40_RS20705;Dbxref=GenBank:WP_043143013.1;Name=WP_043143013.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004932281.1;locus_tag=IY40_RS20705;product=aspartyl/asparaginyl beta-hydroxylase domain-containing protein;protein_id=WP_043143013.1;transl_table=11 NZ_JPQY01000037.1 RefSeq gene 50706 51152 . - . ID=gene-IY40_RS20710;Name=IY40_RS20710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS20710;old_locus_tag=IY40_21075 NZ_JPQY01000037.1 Protein Homology CDS 50706 51152 . - 0 ID=cds-WP_025303110.1;Parent=gene-IY40_RS20710;Dbxref=GenBank:WP_025303110.1;Name=WP_025303110.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309703.5;locus_tag=IY40_RS20710;product=YcgN family cysteine cluster protein;protein_id=WP_025303110.1;transl_table=11 NZ_JPQY01000037.1 RefSeq gene 51275 51931 . - . ID=gene-IY40_RS20715;Name=IY40_RS20715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS20715;old_locus_tag=IY40_21080 NZ_JPQY01000037.1 Protein Homology CDS 51275 51931 . - 0 ID=cds-WP_043143015.1;Parent=gene-IY40_RS20715;Dbxref=GenBank:WP_043143015.1;Name=WP_043143015.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211740.1;locus_tag=IY40_RS20715;product=fumarylacetoacetate hydrolase family protein;protein_id=WP_043143015.1;transl_table=11 NZ_JPQY01000037.1 RefSeq gene 51990 53012 . - . ID=gene-IY40_RS20720;Name=IY40_RS20720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS20720;old_locus_tag=IY40_21085 NZ_JPQY01000037.1 Protein Homology CDS 51990 53012 . - 0 ID=cds-WP_043143018.1;Parent=gene-IY40_RS20720;Dbxref=GenBank:WP_043143018.1;Name=WP_043143018.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019452787.1;locus_tag=IY40_RS20720;product=lytic murein transglycosylase;protein_id=WP_043143018.1;transl_table=11 NZ_JPQY01000037.1 RefSeq gene 53041 53313 . - . ID=gene-IY40_RS20725;Name=IY40_RS20725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS20725;old_locus_tag=IY40_21090 NZ_JPQY01000037.1 Protein Homology CDS 53041 53313 . - 0 ID=cds-WP_033643340.1;Parent=gene-IY40_RS20725;Dbxref=GenBank:WP_033643340.1;Name=WP_033643340.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004932294.1;locus_tag=IY40_RS20725;product=YcgL domain-containing protein;protein_id=WP_033643340.1;transl_table=11 NZ_JPQY01000037.1 RefSeq gene 53450 54145 . + . ID=gene-IY40_RS20730;Name=minC;gbkey=Gene;gene=minC;gene_biotype=protein_coding;locus_tag=IY40_RS20730;old_locus_tag=IY40_21095 NZ_JPQY01000037.1 Protein Homology CDS 53450 54145 . + 0 ID=cds-WP_025303113.1;Parent=gene-IY40_RS20730;Dbxref=GenBank:WP_025303113.1;Name=WP_025303113.1;Ontology_term=GO:0000918,GO:1901891,GO:0004857;gbkey=CDS;gene=minC;go_function=enzyme inhibitor activity|0004857||IEA;go_process=division septum site selection|0000918||IEA,regulation of cell septum assembly|1901891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019083202.1;locus_tag=IY40_RS20730;product=septum site-determining protein MinC;protein_id=WP_025303113.1;transl_table=11 NZ_JPQY01000037.1 RefSeq gene 54171 54983 . + . ID=gene-IY40_RS20735;Name=minD;gbkey=Gene;gene=minD;gene_biotype=protein_coding;locus_tag=IY40_RS20735;old_locus_tag=IY40_21100 NZ_JPQY01000037.1 Protein Homology CDS 54171 54983 . + 0 ID=cds-WP_016927452.1;Parent=gene-IY40_RS20735;Dbxref=GenBank:WP_016927452.1;Name=WP_016927452.1;gbkey=CDS;gene=minD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020801817.1;locus_tag=IY40_RS20735;product=septum site-determining protein MinD;protein_id=WP_016927452.1;transl_table=11 NZ_JPQY01000037.1 RefSeq gene 54987 55256 . + . ID=gene-IY40_RS20740;Name=minE;gbkey=Gene;gene=minE;gene_biotype=protein_coding;locus_tag=IY40_RS20740;old_locus_tag=IY40_21105 NZ_JPQY01000037.1 Protein Homology CDS 54987 55256 . + 0 ID=cds-WP_004932303.1;Parent=gene-IY40_RS20740;Dbxref=GenBank:WP_004932303.1;Name=WP_004932303.1;Ontology_term=GO:0032955;gbkey=CDS;gene=minE;go_process=regulation of division septum assembly|0032955||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012145482.1;locus_tag=IY40_RS20740;product=cell division topological specificity factor MinE;protein_id=WP_004932303.1;transl_table=11 NZ_JPQY01000037.1 RefSeq gene 55494 56615 . - . ID=gene-IY40_RS20745;Name=rnd;gbkey=Gene;gene=rnd;gene_biotype=protein_coding;locus_tag=IY40_RS20745;old_locus_tag=IY40_21110 NZ_JPQY01000037.1 Protein Homology CDS 55494 56615 . - 0 ID=cds-WP_025303114.1;Parent=gene-IY40_RS20745;Dbxref=GenBank:WP_025303114.1;Name=WP_025303114.1;Ontology_term=GO:0008033,GO:0003676,GO:0008408,GO:0033890;gbkey=CDS;gene=rnd;go_function=nucleic acid binding|0003676||IEA,3'-5' exonuclease activity|0008408||IEA,ribonuclease D activity|0033890||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211181.1;locus_tag=IY40_RS20745;product=ribonuclease D;protein_id=WP_025303114.1;transl_table=11 NZ_JPQY01000037.1 RefSeq gene 56697 58385 . - . ID=gene-IY40_RS20750;Name=fadD;gbkey=Gene;gene=fadD;gene_biotype=protein_coding;locus_tag=IY40_RS20750;old_locus_tag=IY40_21115 NZ_JPQY01000037.1 Protein Homology CDS 56697 58385 . - 0 ID=cds-WP_025303115.1;Parent=gene-IY40_RS20750;Dbxref=GenBank:WP_025303115.1;Name=WP_025303115.1;gbkey=CDS;gene=fadD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002220632.1;locus_tag=IY40_RS20750;product=long-chain-fatty-acid--CoA ligase FadD;protein_id=WP_025303115.1;transl_table=11 NZ_JPQY01000037.1 RefSeq gene 58595 59185 . - . ID=gene-IY40_RS20755;Name=IY40_RS20755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS20755;old_locus_tag=IY40_21120 NZ_JPQY01000037.1 Protein Homology CDS 58595 59185 . - 0 ID=cds-WP_021503867.1;Parent=gene-IY40_RS20755;Dbxref=GenBank:WP_021503867.1;Name=WP_021503867.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015378122.1;locus_tag=IY40_RS20755;product=Slp family lipoprotein;protein_id=WP_021503867.1;transl_table=11 NZ_JPQY01000037.1 RefSeq gene 59286 59987 . - . ID=gene-IY40_RS20760;Name=tsaB;gbkey=Gene;gene=tsaB;gene_biotype=protein_coding;locus_tag=IY40_RS20760;old_locus_tag=IY40_21125 NZ_JPQY01000037.1 Protein Homology CDS 59286 59987 . - 0 ID=cds-WP_025303116.1;Parent=gene-IY40_RS20760;Dbxref=GenBank:WP_025303116.1;Name=WP_025303116.1;Ontology_term=GO:0002949;gbkey=CDS;gene=tsaB;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004945483.1;locus_tag=IY40_RS20760;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB;protein_id=WP_025303116.1;transl_table=11 NZ_JPQY01000037.1 RefSeq gene 60067 61983 . - . ID=gene-IY40_RS20765;Name=IY40_RS20765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS20765;old_locus_tag=IY40_21130 NZ_JPQY01000037.1 Protein Homology CDS 60067 61983 . - 0 ID=cds-WP_043143022.1;Parent=gene-IY40_RS20765;Dbxref=GenBank:WP_043143022.1;Name=WP_043143022.1;Ontology_term=GO:0003676,GO:0003677,GO:0004386,GO:0005524;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,DNA binding|0003677||IEA,helicase activity|0004386||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004932318.1;locus_tag=IY40_RS20765;product=ATP-dependent DNA helicase;protein_id=WP_043143022.1;transl_table=11 NZ_JPQY01000037.1 RefSeq gene 62117 62461 . + . ID=gene-IY40_RS20770;Name=IY40_RS20770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS20770;old_locus_tag=IY40_21135 NZ_JPQY01000037.1 Protein Homology CDS 62117 62461 . + 0 ID=cds-WP_025303117.1;Parent=gene-IY40_RS20770;Dbxref=GenBank:WP_025303117.1;Name=WP_025303117.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005169202.1;locus_tag=IY40_RS20770;product=RidA family protein;protein_id=WP_025303117.1;transl_table=11 NZ_JPQY01000037.1 RefSeq gene 62524 62853 . - . ID=gene-IY40_RS20775;Name=mdtI;gbkey=Gene;gene=mdtI;gene_biotype=protein_coding;locus_tag=IY40_RS20775;old_locus_tag=IY40_21140 NZ_JPQY01000037.1 Protein Homology CDS 62524 62853 . - 0 ID=cds-WP_016927446.1;Parent=gene-IY40_RS20775;Dbxref=GenBank:WP_016927446.1;Name=WP_016927446.1;gbkey=CDS;gene=mdtI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020801673.1;locus_tag=IY40_RS20775;product=multidrug/spermidine efflux SMR transporter subunit MdtI;protein_id=WP_016927446.1;transl_table=11 NZ_JPQY01000037.1 RefSeq gene 62840 63208 . - . ID=gene-IY40_RS20780;Name=mdtJ;gbkey=Gene;gene=mdtJ;gene_biotype=protein_coding;locus_tag=IY40_RS20780;old_locus_tag=IY40_21145 NZ_JPQY01000037.1 Protein Homology CDS 62840 63208 . - 0 ID=cds-WP_025303118.1;Parent=gene-IY40_RS20780;Dbxref=GenBank:WP_025303118.1;Name=WP_025303118.1;Ontology_term=GO:0015848,GO:0015606,GO:0016020;gbkey=CDS;gene=mdtJ;go_component=membrane|0016020||IEA;go_function=spermidine transmembrane transporter activity|0015606||IEA;go_process=spermidine transport|0015848||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019452797.1;locus_tag=IY40_RS20780;product=multidrug/spermidine efflux SMR transporter subunit MdtJ;protein_id=WP_025303118.1;transl_table=11 NZ_JPQY01000037.1 RefSeq gene 63761 64402 . - . ID=gene-IY40_RS20785;Name=IY40_RS20785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS20785;old_locus_tag=IY40_21150 NZ_JPQY01000037.1 Protein Homology CDS 63761 64402 . - 0 ID=cds-WP_025303119.1;Parent=gene-IY40_RS20785;Dbxref=GenBank:WP_025303119.1;Name=WP_025303119.1;Ontology_term=GO:0016829,GO:0016830,GO:0016832,GO:0016833;gbkey=CDS;go_function=lyase activity|0016829||IEA,carbon-carbon lyase activity|0016830||IEA,aldehyde-lyase activity|0016832||IEA,oxo-acid-lyase activity|0016833||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000800512.1;locus_tag=IY40_RS20785;product=bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase;protein_id=WP_025303119.1;transl_table=11 NZ_JPQY01000037.1 RefSeq gene 64557 66032 . - . ID=gene-IY40_RS20790;Name=zwf;gbkey=Gene;gene=zwf;gene_biotype=protein_coding;locus_tag=IY40_RS20790;old_locus_tag=IY40_21155 NZ_JPQY01000037.1 Protein Homology CDS 64557 66032 . - 0 ID=cds-WP_019452799.1;Parent=gene-IY40_RS20790;Dbxref=GenBank:WP_019452799.1;Name=WP_019452799.1;Ontology_term=GO:0006006,GO:0006098,GO:0004345,GO:0016614,GO:0050661;gbkey=CDS;gene=zwf;go_function=glucose-6-phosphate dehydrogenase activity|0004345||IEA,oxidoreductase activity%2C acting on CH-OH group of donors|0016614||IEA,NADP binding|0050661||IEA;go_process=glucose metabolic process|0006006||IEA,pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013317812.1;locus_tag=IY40_RS20790;product=glucose-6-phosphate dehydrogenase;protein_id=WP_019452799.1;transl_table=11 NZ_JPQY01000037.1 RefSeq gene 66481 67353 . + . ID=gene-IY40_RS20795;Name=IY40_RS20795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS20795;old_locus_tag=IY40_21160 NZ_JPQY01000037.1 Protein Homology CDS 66481 67353 . + 0 ID=cds-WP_025303120.1;Parent=gene-IY40_RS20795;Dbxref=GenBank:WP_025303120.1;Name=WP_025303120.1;Ontology_term=GO:0006351,GO:0006355,GO:0003677,GO:0003700,GO:0097367;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,carbohydrate derivative binding|0097367||IEA;go_process=DNA-templated transcription|0006351||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016927443.1;locus_tag=IY40_RS20795;product=MurR/RpiR family transcriptional regulator;protein_id=WP_025303120.1;transl_table=11 NZ_JPQY01000037.1 RefSeq gene 67544 68986 . + . ID=gene-IY40_RS20800;Name=pyk;gbkey=Gene;gene=pyk;gene_biotype=protein_coding;locus_tag=IY40_RS20800;old_locus_tag=IY40_21165 NZ_JPQY01000037.1 Protein Homology CDS 67544 68986 . + 0 ID=cds-WP_004932339.1;Parent=gene-IY40_RS20800;Dbxref=GenBank:WP_004932339.1;Name=WP_004932339.1;Ontology_term=GO:0006096,GO:0000287,GO:0004743,GO:0030955;gbkey=CDS;gene=pyk;go_function=magnesium ion binding|0000287||IEA,pyruvate kinase activity|0004743||IEA,potassium ion binding|0030955||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120709.1;locus_tag=IY40_RS20800;product=pyruvate kinase;protein_id=WP_004932339.1;transl_table=11 NZ_JPQY01000037.1 RefSeq gene 69072 69953 . + . ID=gene-IY40_RS20805;Name=IY40_RS20805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS20805;old_locus_tag=IY40_21170 NZ_JPQY01000037.1 Protein Homology CDS 69072 69953 . + 0 ID=cds-WP_043143025.1;Parent=gene-IY40_RS20805;Dbxref=GenBank:WP_043143025.1;Name=WP_043143025.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004932343.1;locus_tag=IY40_RS20805;product=leucine-rich repeat domain-containing protein;protein_id=WP_043143025.1;transl_table=11 NZ_JPQY01000037.1 RefSeq gene 70003 70971 . - . ID=gene-IY40_RS20810;Name=lpxM;gbkey=Gene;gene=lpxM;gene_biotype=protein_coding;gene_synonym=msbB;locus_tag=IY40_RS20810;old_locus_tag=IY40_21175 NZ_JPQY01000037.1 Protein Homology CDS 70003 70971 . - 0 ID=cds-WP_015378127.1;Parent=gene-IY40_RS20810;Dbxref=GenBank:WP_015378127.1;Name=WP_015378127.1;Note=LpxM is lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase%2C an enzyme characterized in Escherichia coli and involved in biosynthesis of the form of lipid A found in that species and some closely related species.;Ontology_term=GO:0009103,GO:0016747,GO:0009276,GO:0016020;gbkey=CDS;gene=lpxM;go_component=Gram-negative-bacterium-type cell wall|0009276||IEA,membrane|0016020||IEA;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004932345.1;locus_tag=IY40_RS20810;product=lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase;protein_id=WP_015378127.1;transl_table=11 NZ_JPQY01000037.1 RefSeq gene 71123 72445 . - . ID=gene-IY40_RS20815;Name=mepM;gbkey=Gene;gene=mepM;gene_biotype=protein_coding;locus_tag=IY40_RS20815;old_locus_tag=IY40_21180 NZ_JPQY01000037.1 Protein Homology CDS 71123 72445 . - 0 ID=cds-WP_004932347.1;Parent=gene-IY40_RS20815;Dbxref=GenBank:WP_004932347.1;Name=WP_004932347.1;Ontology_term=GO:0042834;gbkey=CDS;gene=mepM;go_function=peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002228437.1;locus_tag=IY40_RS20815;product=murein DD-endopeptidase MepM;protein_id=WP_004932347.1;transl_table=11 NZ_JPQY01000037.1 RefSeq gene 72467 73411 . - . ID=gene-IY40_RS20820;Name=znuA;gbkey=Gene;gene=znuA;gene_biotype=protein_coding;locus_tag=IY40_RS20820;old_locus_tag=IY40_21185 NZ_JPQY01000037.1 Protein Homology CDS 72467 73411 . - 0 ID=cds-WP_025303123.1;Parent=gene-IY40_RS20820;Dbxref=GenBank:WP_025303123.1;Name=WP_025303123.1;Ontology_term=GO:0006829,GO:0046872;gbkey=CDS;gene=znuA;go_function=metal ion binding|0046872||IEA;go_process=zinc ion transport|0006829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304106.1;locus_tag=IY40_RS20820;product=zinc ABC transporter substrate-binding protein ZnuA;protein_id=WP_025303123.1;transl_table=11 NZ_JPQY01000037.1 RefSeq gene 73490 74248 . + . ID=gene-IY40_RS20825;Name=znuC;gbkey=Gene;gene=znuC;gene_biotype=protein_coding;locus_tag=IY40_RS20825;old_locus_tag=IY40_21190 NZ_JPQY01000037.1 Protein Homology CDS 73490 74248 . + 0 ID=cds-WP_004932357.1;Parent=gene-IY40_RS20825;Dbxref=GenBank:WP_004932357.1;Name=WP_004932357.1;Ontology_term=GO:0006829,GO:0005524,GO:0015633;gbkey=CDS;gene=znuC;go_function=ATP binding|0005524||IEA,ABC-type zinc transporter activity|0015633||IEA;go_process=zinc ion transport|0006829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011094033.1;locus_tag=IY40_RS20825;product=zinc ABC transporter ATP-binding protein ZnuC;protein_id=WP_004932357.1;transl_table=11 NZ_JPQY01000037.1 RefSeq gene 74245 75030 . + . ID=gene-IY40_RS20830;Name=znuB;gbkey=Gene;gene=znuB;gene_biotype=protein_coding;locus_tag=IY40_RS20830;old_locus_tag=IY40_21195 NZ_JPQY01000037.1 Protein Homology CDS 74245 75030 . + 0 ID=cds-WP_025303124.1;Parent=gene-IY40_RS20830;Dbxref=GenBank:WP_025303124.1;Name=WP_025303124.1;Ontology_term=GO:0055085,GO:0042626;gbkey=CDS;gene=znuB;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004932361.1;locus_tag=IY40_RS20830;product=zinc ABC transporter permease subunit ZnuB;protein_id=WP_025303124.1;transl_table=11 NZ_JPQY01000037.1 RefSeq gene 75097 76101 . - . ID=gene-IY40_RS20835;Name=ruvB;gbkey=Gene;gene=ruvB;gene_biotype=protein_coding;locus_tag=IY40_RS20835;old_locus_tag=IY40_21200 NZ_JPQY01000037.1 Protein Homology CDS 75097 76101 . - 0 ID=cds-WP_025303125.1;Parent=gene-IY40_RS20835;Dbxref=GenBank:WP_025303125.1;Name=WP_025303125.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677,GO:0005524,GO:0009378;gbkey=CDS;gene=ruvB;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,four-way junction helicase activity|0009378||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013026077.1;locus_tag=IY40_RS20835;product=Holliday junction branch migration DNA helicase RuvB;protein_id=WP_025303125.1;transl_table=11 NZ_JPQY01000037.1 RefSeq gene 76121 76735 . - . ID=gene-IY40_RS20840;Name=ruvA;gbkey=Gene;gene=ruvA;gene_biotype=protein_coding;locus_tag=IY40_RS20840;old_locus_tag=IY40_21205 NZ_JPQY01000037.1 Protein Homology CDS 76121 76735 . - 0 ID=cds-WP_025303126.1;Parent=gene-IY40_RS20840;Dbxref=GenBank:WP_025303126.1;Name=WP_025303126.1;Ontology_term=GO:0006281,GO:0006310,GO:0003678,GO:0009378,GO:0009379;gbkey=CDS;gene=ruvA;go_component=Holliday junction helicase complex|0009379||IEA;go_function=DNA helicase activity|0003678||IEA,four-way junction helicase activity|0009378||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006709047.1;locus_tag=IY40_RS20840;product=Holliday junction branch migration protein RuvA;protein_id=WP_025303126.1;transl_table=11 NZ_JPQY01000037.1 RefSeq gene 76848 77369 . - . ID=gene-IY40_RS20845;Name=ruvC;gbkey=Gene;gene=ruvC;gene_biotype=protein_coding;locus_tag=IY40_RS20845;old_locus_tag=IY40_21210 NZ_JPQY01000037.1 Protein Homology CDS 76848 77369 . - 0 ID=cds-WP_004932367.1;Parent=gene-IY40_RS20845;Dbxref=GenBank:WP_004932367.1;Name=WP_004932367.1;Ontology_term=GO:0006310,GO:0008821;gbkey=CDS;gene=ruvC;go_function=crossover junction DNA endonuclease activity|0008821||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005068993.1;locus_tag=IY40_RS20845;product=crossover junction endodeoxyribonuclease RuvC;protein_id=WP_004932367.1;transl_table=11 NZ_JPQY01000037.1 RefSeq gene 77427 78170 . - . ID=gene-IY40_RS20850;Name=IY40_RS20850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS20850;old_locus_tag=IY40_21215 NZ_JPQY01000037.1 Protein Homology CDS 77427 78170 . - 0 ID=cds-WP_004932370.1;Parent=gene-IY40_RS20850;Dbxref=GenBank:WP_004932370.1;Name=WP_004932370.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000907250.1;locus_tag=IY40_RS20850;product=YebC/PmpR family DNA-binding transcriptional regulator;protein_id=WP_004932370.1;transl_table=11 NZ_JPQY01000037.1 RefSeq gene 78190 78636 . - . ID=gene-IY40_RS20855;Name=nudB;gbkey=Gene;gene=nudB;gene_biotype=protein_coding;locus_tag=IY40_RS20855;old_locus_tag=IY40_21220 NZ_JPQY01000037.1 Protein Homology CDS 78190 78636 . - 0 ID=cds-WP_004932373.1;Parent=gene-IY40_RS20855;Dbxref=GenBank:WP_004932373.1;Name=WP_004932373.1;Ontology_term=GO:0046656,GO:0008828,GO:0019177;gbkey=CDS;gene=nudB;go_function=dATP diphosphatase activity|0008828||IEA,dihydroneopterin triphosphate pyrophosphohydrolase activity|0019177||IEA;go_process=folic acid biosynthetic process|0046656||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004932373.1;locus_tag=IY40_RS20855;product=dihydroneopterin triphosphate diphosphatase;protein_id=WP_004932373.1;transl_table=11 NZ_JPQY01000037.1 RefSeq gene 78636 80420 . - . ID=gene-IY40_RS20860;Name=aspS;gbkey=Gene;gene=aspS;gene_biotype=protein_coding;locus_tag=IY40_RS20860;old_locus_tag=IY40_21225 NZ_JPQY01000037.1 Protein Homology CDS 78636 80420 . - 0 ID=cds-WP_043143027.1;Parent=gene-IY40_RS20860;Dbxref=GenBank:WP_043143027.1;Name=WP_043143027.1;Ontology_term=GO:0006422,GO:0004815,GO:0005524,GO:0005737;gbkey=CDS;gene=aspS;go_component=cytoplasm|0005737||IEA;go_function=aspartate-tRNA ligase activity|0004815||IEA,ATP binding|0005524||IEA;go_process=aspartyl-tRNA aminoacylation|0006422||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012145505.1;locus_tag=IY40_RS20860;product=aspartate--tRNA ligase;protein_id=WP_043143027.1;transl_table=11 NZ_JPQY01000037.1 RefSeq gene 80495 80725 . - . ID=gene-IY40_RS25500;Name=IY40_RS25500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS25500 NZ_JPQY01000037.1 Protein Homology CDS 80495 80725 . - 0 ID=cds-WP_320204121.1;Parent=gene-IY40_RS25500;Dbxref=GenBank:WP_320204121.1;Name=WP_320204121.1;Ontology_term=GO:0008270;gbkey=CDS;go_function=zinc ion binding|0008270||IEA;inference=COORDINATES: protein motif:HMM:TIGR02605.1;locus_tag=IY40_RS25500;product=FmdB family zinc ribbon protein;protein_id=WP_320204121.1;transl_table=11 NZ_JPQY01000037.1 RefSeq gene 80941 81519 . + . ID=gene-IY40_RS20870;Name=IY40_RS20870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS20870;old_locus_tag=IY40_21230 NZ_JPQY01000037.1 Protein Homology CDS 80941 81519 . + 0 ID=cds-WP_043143030.1;Parent=gene-IY40_RS20870;Dbxref=GenBank:WP_043143030.1;Name=WP_043143030.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004945548.1;locus_tag=IY40_RS20870;product=hydrolase;protein_id=WP_043143030.1;transl_table=11 NZ_JPQY01000037.1 RefSeq gene 81573 82388 . + . ID=gene-IY40_RS20875;Name=IY40_RS20875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS20875;old_locus_tag=IY40_21235 NZ_JPQY01000037.1 Protein Homology CDS 81573 82388 . + 0 ID=cds-WP_089180536.1;Parent=gene-IY40_RS20875;Dbxref=GenBank:WP_089180536.1;Name=WP_089180536.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105129.1;locus_tag=IY40_RS20875;product=DUF72 domain-containing protein;protein_id=WP_089180536.1;transl_table=11 NZ_JPQY01000037.1 RefSeq gene 82491 82886 . + . ID=gene-IY40_RS20880;Name=IY40_RS20880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS20880;old_locus_tag=IY40_21240 NZ_JPQY01000037.1 Protein Homology CDS 82491 82886 . + 0 ID=cds-WP_004932387.1;Parent=gene-IY40_RS20880;Dbxref=GenBank:WP_004932387.1;Name=WP_004932387.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010309229.1;locus_tag=IY40_RS20880;product=MAPEG family protein;protein_id=WP_004932387.1;transl_table=11 NZ_JPQY01000037.1 RefSeq gene 82989 83732 . + . ID=gene-IY40_RS20885;Name=cmoA;gbkey=Gene;gene=cmoA;gene_biotype=protein_coding;locus_tag=IY40_RS20885;old_locus_tag=IY40_21245 NZ_JPQY01000037.1 Protein Homology CDS 82989 83732 . + 0 ID=cds-WP_043143033.1;Parent=gene-IY40_RS20885;Dbxref=GenBank:WP_043143033.1;Name=WP_043143033.1;gbkey=CDS;gene=cmoA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004932389.1;locus_tag=IY40_RS20885;product=carboxy-S-adenosyl-L-methionine synthase CmoA;protein_id=WP_043143033.1;transl_table=11 NZ_JPQY01000037.1 RefSeq gene 83729 84700 . + . ID=gene-IY40_RS20890;Name=cmoB;gbkey=Gene;gene=cmoB;gene_biotype=protein_coding;locus_tag=IY40_RS20890;old_locus_tag=IY40_21250 NZ_JPQY01000037.1 Protein Homology CDS 83729 84700 . + 0 ID=cds-WP_025303131.1;Parent=gene-IY40_RS20890;Dbxref=GenBank:WP_025303131.1;Name=WP_025303131.1;Ontology_term=GO:0002098,GO:0016765;gbkey=CDS;gene=cmoB;go_function=transferase activity%2C transferring alkyl or aryl (other than methyl) groups|0016765||IEA;go_process=tRNA wobble uridine modification|0002098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460863.1;locus_tag=IY40_RS20890;product=tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB;protein_id=WP_025303131.1;transl_table=11 NZ_JPQY01000037.1 RefSeq gene 84737 86827 . - . ID=gene-IY40_RS24865;Name=IY40_RS24865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS24865 NZ_JPQY01000037.1 Protein Homology CDS 84737 86827 . - 0 ID=cds-WP_072008274.1;Parent=gene-IY40_RS24865;Dbxref=GenBank:WP_072008274.1;Name=WP_072008274.1;Ontology_term=GO:0006457;gbkey=CDS;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004932395.1;locus_tag=IY40_RS24865;product=FKBP-type peptidyl-prolyl cis-trans isomerase N-terminal domain-containing protein;protein_id=WP_072008274.1;transl_table=11 NZ_JPQY01000037.1 RefSeq gene 86824 87228 . - . ID=gene-IY40_RS20900;Name=IY40_RS20900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS20900;old_locus_tag=IY40_21260 NZ_JPQY01000037.1 Protein Homology CDS 86824 87228 . - 0 ID=cds-WP_025303133.1;Parent=gene-IY40_RS20900;Dbxref=GenBank:WP_025303133.1;Name=WP_025303133.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006325892.1;locus_tag=IY40_RS20900;product=hypothetical protein;protein_id=WP_025303133.1;transl_table=11 NZ_JPQY01000037.1 RefSeq gene 87666 89486 . + . ID=gene-IY40_RS20905;Name=IY40_RS20905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS20905;old_locus_tag=IY40_21265 NZ_JPQY01000037.1 Protein Homology CDS 87666 89486 . + 0 ID=cds-WP_043143035.1;Parent=gene-IY40_RS20905;Dbxref=GenBank:WP_043143035.1;Name=WP_043143035.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019452816.1;locus_tag=IY40_RS20905;product=hypothetical protein;protein_id=WP_043143035.1;transl_table=11 NZ_JPQY01000037.1 RefSeq gene 89618 90376 . - . ID=gene-IY40_RS20910;Name=cutC;gbkey=Gene;gene=cutC;gene_biotype=protein_coding;locus_tag=IY40_RS20910;old_locus_tag=IY40_21270 NZ_JPQY01000037.1 Protein Homology CDS 89618 90376 . - 0 ID=cds-WP_043143046.1;Parent=gene-IY40_RS20910;Dbxref=GenBank:WP_043143046.1;Name=WP_043143046.1;Ontology_term=GO:0055070,GO:0005507;gbkey=CDS;gene=cutC;go_function=copper ion binding|0005507||IEA;go_process=copper ion homeostasis|0055070||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019452817.1;locus_tag=IY40_RS20910;product=copper homeostasis protein CutC;protein_id=WP_043143046.1;transl_table=11 NZ_JPQY01000037.1 RefSeq gene 90478 91626 . + . ID=gene-IY40_RS20915;Name=IY40_RS20915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS20915;old_locus_tag=IY40_21275 NZ_JPQY01000037.1 Protein Homology CDS 90478 91626 . + 0 ID=cds-WP_043143038.1;Parent=gene-IY40_RS20915;Dbxref=GenBank:WP_043143038.1;Name=WP_043143038.1;Ontology_term=GO:0009086,GO:0030170,GO:0047804;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA,cysteine-S-conjugate beta-lyase activity|0047804||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004929647.1;locus_tag=IY40_RS20915;product=MalY/PatB family protein;protein_id=WP_043143038.1;transl_table=11 NZ_JPQY01000037.1 RefSeq gene 91623 92189 . - . ID=gene-IY40_RS20920;Name=IY40_RS20920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS20920;old_locus_tag=IY40_21280 NZ_JPQY01000037.1 Protein Homology CDS 91623 92189 . - 0 ID=cds-WP_043143041.1;Parent=gene-IY40_RS20920;Dbxref=GenBank:WP_043143041.1;Name=WP_043143041.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004929646.1;locus_tag=IY40_RS20920;product=VOC family protein;protein_id=WP_043143041.1;transl_table=11 ##sequence-region NZ_JPQY01000038.1 1 4957 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=615 NZ_JPQY01000038.1 RefSeq region 1 4957 . + . ID=NZ_JPQY01000038.1:1..4957;Dbxref=taxon:615;collected-by=Mahloro H. Serepa%3B Vincent M. Gray;collection-date=2013-04-11;country=South Africa: North West Province;gbkey=Src;genome=genomic;identified-by=Mahloro H. Serepa%3B Vincent M. Gray;isolation-source=entomopathogenic nematode Oscheius sp. MCB living in soil;mol_type=genomic DNA;nat-host=Oscheius sp. MCB;strain=MCB NZ_JPQY01000038.1 RefSeq gene 41 853 . - . ID=gene-IY40_RS20930;Name=sapF;gbkey=Gene;gene=sapF;gene_biotype=protein_coding;locus_tag=IY40_RS20930;old_locus_tag=IY40_21290 NZ_JPQY01000038.1 Protein Homology CDS 41 853 . - 0 ID=cds-WP_016927550.1;Parent=gene-IY40_RS20930;Dbxref=GenBank:WP_016927550.1;Name=WP_016927550.1;gbkey=CDS;gene=sapF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012145361.1;locus_tag=IY40_RS20930;product=putrescine export ABC transporter ATP-binding protein SapF;protein_id=WP_016927550.1;transl_table=11 NZ_JPQY01000038.1 RefSeq gene 855 1847 . - . ID=gene-IY40_RS20935;Name=sapD;gbkey=Gene;gene=sapD;gene_biotype=protein_coding;locus_tag=IY40_RS20935;old_locus_tag=IY40_21295 NZ_JPQY01000038.1 Protein Homology CDS 855 1847 . - 0 ID=cds-WP_019452674.1;Parent=gene-IY40_RS20935;Dbxref=GenBank:WP_019452674.1;Name=WP_019452674.1;gbkey=CDS;gene=sapD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015697767.1;locus_tag=IY40_RS20935;product=putrescine export ABC transporter ATP-binding protein SapD;protein_id=WP_019452674.1;transl_table=11 NZ_JPQY01000038.1 RefSeq gene 1847 2737 . - . ID=gene-IY40_RS20940;Name=sapC;gbkey=Gene;gene=sapC;gene_biotype=protein_coding;locus_tag=IY40_RS20940;old_locus_tag=IY40_21300 NZ_JPQY01000038.1 Protein Homology CDS 1847 2737 . - 0 ID=cds-WP_004930580.1;Parent=gene-IY40_RS20940;Dbxref=GenBank:WP_004930580.1;Name=WP_004930580.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=sapC;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019079344.1;locus_tag=IY40_RS20940;product=putrescine export ABC transporter permease SapC;protein_id=WP_004930580.1;transl_table=11 NZ_JPQY01000038.1 RefSeq gene 2724 3689 . - . ID=gene-IY40_RS20945;Name=sapB;gbkey=Gene;gene=sapB;gene_biotype=protein_coding;locus_tag=IY40_RS20945;old_locus_tag=IY40_21305 NZ_JPQY01000038.1 Protein Homology CDS 2724 3689 . - 0 ID=cds-WP_004930575.1;Parent=gene-IY40_RS20945;Dbxref=GenBank:WP_004930575.1;Name=WP_004930575.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=sapB;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126482.1;locus_tag=IY40_RS20945;product=putrescine export ABC transporter permease SapB;protein_id=WP_004930575.1;transl_table=11 NZ_JPQY01000038.1 RefSeq gene 3686 4957 . - . ID=gene-IY40_RS20950;Name=sapA;end_range=4957,.;gbkey=Gene;gene=sapA;gene_biotype=protein_coding;locus_tag=IY40_RS20950;old_locus_tag=IY40_21310;partial=true NZ_JPQY01000038.1 Protein Homology CDS 3686 4957 . - 0 ID=cds-WP_043143055.1;Parent=gene-IY40_RS20950;Dbxref=GenBank:WP_043143055.1;Name=WP_043143055.1;Ontology_term=GO:0055085,GO:0043190;end_range=4957,.;gbkey=CDS;gene=sapA;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004930574.1;locus_tag=IY40_RS20950;partial=true;product=ABC transporter substrate-binding protein SapA;protein_id=WP_043143055.1;transl_table=11 ##sequence-region NZ_JPQY01000039.1 1 112432 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=615 NZ_JPQY01000039.1 RefSeq region 1 112432 . + . ID=NZ_JPQY01000039.1:1..112432;Dbxref=taxon:615;collected-by=Mahloro H. Serepa%3B Vincent M. Gray;collection-date=2013-04-11;country=South Africa: North West Province;gbkey=Src;genome=genomic;identified-by=Mahloro H. Serepa%3B Vincent M. Gray;isolation-source=entomopathogenic nematode Oscheius sp. MCB living in soil;mol_type=genomic DNA;nat-host=Oscheius sp. MCB;strain=MCB NZ_JPQY01000039.1 RefSeq gene 294 1202 . - . ID=gene-IY40_RS20955;Name=IY40_RS20955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS20955;old_locus_tag=IY40_21315 NZ_JPQY01000039.1 Protein Homology CDS 294 1202 . - 0 ID=cds-WP_043143060.1;Parent=gene-IY40_RS20955;Dbxref=GenBank:WP_043143060.1;Name=WP_043143060.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016927018.1;locus_tag=IY40_RS20955;product=LysR family transcriptional regulator;protein_id=WP_043143060.1;transl_table=11 NZ_JPQY01000039.1 RefSeq gene 1310 2617 . + . ID=gene-IY40_RS20960;Name=IY40_RS20960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS20960;old_locus_tag=IY40_21320 NZ_JPQY01000039.1 Protein Homology CDS 1310 2617 . + 0 ID=cds-WP_043143062.1;Parent=gene-IY40_RS20960;Dbxref=GenBank:WP_043143062.1;Name=WP_043143062.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016808924.1;locus_tag=IY40_RS20960;product=serine hydrolase domain-containing protein;protein_id=WP_043143062.1;transl_table=11 NZ_JPQY01000039.1 RefSeq gene 2685 3434 . - . ID=gene-IY40_RS20965;Name=IY40_RS20965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS20965;old_locus_tag=IY40_21325 NZ_JPQY01000039.1 Protein Homology CDS 2685 3434 . - 0 ID=cds-WP_043143064.1;Parent=gene-IY40_RS20965;Dbxref=GenBank:WP_043143064.1;Name=WP_043143064.1;Ontology_term=GO:0009101,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=glycoprotein biosynthetic process|0009101||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016927020.1;locus_tag=IY40_RS20965;product=glycosyltransferase family 2 protein;protein_id=WP_043143064.1;transl_table=11 NZ_JPQY01000039.1 RefSeq gene 3538 4617 . - . ID=gene-IY40_RS20970;Name=lptG;gbkey=Gene;gene=lptG;gene_biotype=protein_coding;locus_tag=IY40_RS20970;old_locus_tag=IY40_21330 NZ_JPQY01000039.1 Protein Homology CDS 3538 4617 . - 0 ID=cds-WP_043143066.1;Parent=gene-IY40_RS20970;Dbxref=GenBank:WP_043143066.1;Name=WP_043143066.1;Ontology_term=GO:0055085,GO:0015221,GO:0043190;gbkey=CDS;gene=lptG;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=lipopolysaccharide transmembrane transporter activity|0015221||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015378490.1;locus_tag=IY40_RS20970;product=LPS export ABC transporter permease LptG;protein_id=WP_043143066.1;transl_table=11 NZ_JPQY01000039.1 RefSeq gene 4614 5684 . - . ID=gene-IY40_RS20975;Name=lptF;gbkey=Gene;gene=lptF;gene_biotype=protein_coding;locus_tag=IY40_RS20975;old_locus_tag=IY40_21335 NZ_JPQY01000039.1 Protein Homology CDS 4614 5684 . - 0 ID=cds-WP_043143068.1;Parent=gene-IY40_RS20975;Dbxref=GenBank:WP_043143068.1;Name=WP_043143068.1;Ontology_term=GO:0055085,GO:0015221,GO:0043190;gbkey=CDS;gene=lptF;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=lipopolysaccharide transmembrane transporter activity|0015221||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000779637.1;locus_tag=IY40_RS20975;product=LPS export ABC transporter permease LptF;protein_id=WP_043143068.1;transl_table=11 NZ_JPQY01000039.1 RefSeq gene 5713 6279 . - . ID=gene-IY40_RS20980;Name=IY40_RS20980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS20980;old_locus_tag=IY40_21340 NZ_JPQY01000039.1 Protein Homology CDS 5713 6279 . - 0 ID=cds-WP_043143070.1;Parent=gene-IY40_RS20980;Dbxref=GenBank:WP_043143070.1;Name=WP_043143070.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015378488.1;locus_tag=IY40_RS20980;product=YtfJ family protein;protein_id=WP_043143070.1;transl_table=11 NZ_JPQY01000039.1 RefSeq gene 6300 7169 . - . ID=gene-IY40_RS20985;Name=IY40_RS20985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS20985;old_locus_tag=IY40_21345 NZ_JPQY01000039.1 Protein Homology CDS 6300 7169 . - 0 ID=cds-WP_043143072.1;Parent=gene-IY40_RS20985;Dbxref=GenBank:WP_043143072.1;Name=WP_043143072.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015378487.1;locus_tag=IY40_RS20985;product=hypothetical protein;protein_id=WP_043143072.1;transl_table=11 NZ_JPQY01000039.1 RefSeq gene 7166 8503 . - . ID=gene-IY40_RS20990;Name=IY40_RS20990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS20990;old_locus_tag=IY40_21350 NZ_JPQY01000039.1 Protein Homology CDS 7166 8503 . - 0 ID=cds-WP_004935553.1;Parent=gene-IY40_RS20990;Dbxref=GenBank:WP_004935553.1;Name=WP_004935553.1;Ontology_term=GO:0140327,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=flippase activity|0140327||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019453576.1;locus_tag=IY40_RS20990;product=lipopolysaccharide biosynthesis protein;protein_id=WP_004935553.1;transl_table=11 NZ_JPQY01000039.1 RefSeq gene 8576 9370 . - . ID=gene-IY40_RS20995;Name=IY40_RS20995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS20995;old_locus_tag=IY40_21355 NZ_JPQY01000039.1 Protein Homology CDS 8576 9370 . - 0 ID=cds-WP_043143074.1;Parent=gene-IY40_RS20995;Dbxref=GenBank:WP_043143074.1;Name=WP_043143074.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004935550.1;locus_tag=IY40_RS20995;product=nucleoside/nucleotide kinase family protein;protein_id=WP_043143074.1;transl_table=11 NZ_JPQY01000039.1 RefSeq gene 9401 10126 . - . ID=gene-IY40_RS21000;Name=IY40_RS21000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS21000;old_locus_tag=IY40_21360 NZ_JPQY01000039.1 Protein Homology CDS 9401 10126 . - 0 ID=cds-WP_043143076.1;Parent=gene-IY40_RS21000;Dbxref=GenBank:WP_043143076.1;Name=WP_043143076.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015378485.1;locus_tag=IY40_RS21000;product=nucleoside/nucleotide kinase family protein;protein_id=WP_043143076.1;transl_table=11 NZ_JPQY01000039.1 RefSeq gene 10498 11229 . + . ID=gene-IY40_RS21005;Name=IY40_RS21005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS21005;old_locus_tag=IY40_21365 NZ_JPQY01000039.1 Protein Homology CDS 10498 11229 . + 0 ID=cds-WP_025303502.1;Parent=gene-IY40_RS21005;Dbxref=GenBank:WP_025303502.1;Name=WP_025303502.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015378484.1;locus_tag=IY40_RS21005;product=nucleoside/nucleotide kinase family protein;protein_id=WP_025303502.1;transl_table=11 NZ_JPQY01000039.1 RefSeq gene 11298 12470 . - . ID=gene-IY40_RS21010;Name=spt;gbkey=Gene;gene=spt;gene_biotype=protein_coding;locus_tag=IY40_RS21010;old_locus_tag=IY40_21370 NZ_JPQY01000039.1 Protein Homology CDS 11298 12470 . - 0 ID=cds-WP_025303501.1;Parent=gene-IY40_RS21010;Dbxref=GenBank:WP_025303501.1;Name=WP_025303501.1;Ontology_term=GO:0046513,GO:0004758,GO:0030170;gbkey=CDS;gene=spt;go_function=serine C-palmitoyltransferase activity|0004758||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=ceramide biosynthetic process|0046513||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019453572.1;locus_tag=IY40_RS21010;product=serine palmitoyltransferase;protein_id=WP_025303501.1;transl_table=11 NZ_JPQY01000039.1 RefSeq gene 12457 12717 . - . ID=gene-IY40_RS21015;Name=IY40_RS21015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS21015;old_locus_tag=IY40_21375 NZ_JPQY01000039.1 Protein Homology CDS 12457 12717 . - 0 ID=cds-WP_015378483.1;Parent=gene-IY40_RS21015;Dbxref=GenBank:WP_015378483.1;Name=WP_015378483.1;Ontology_term=GO:0006633,GO:0009245,GO:0000035,GO:0000036;gbkey=CDS;go_function=acyl binding|0000035||IEA,acyl carrier activity|0000036||IEA;go_process=fatty acid biosynthetic process|0006633||IEA,lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004935539.1;locus_tag=IY40_RS21015;product=acyl carrier protein;protein_id=WP_015378483.1;transl_table=11 NZ_JPQY01000039.1 RefSeq gene 12749 13663 . - . ID=gene-IY40_RS21020;Name=IY40_RS21020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS21020;old_locus_tag=IY40_21380 NZ_JPQY01000039.1 Protein Homology CDS 12749 13663 . - 0 ID=cds-WP_043143080.1;Parent=gene-IY40_RS21020;Dbxref=GenBank:WP_043143080.1;Name=WP_043143080.1;Ontology_term=GO:0016491,GO:0051287,GO:0070403;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD binding|0051287||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004935535.1;locus_tag=IY40_RS21020;product=NAD-dependent epimerase/dehydratase family protein;protein_id=WP_043143080.1;transl_table=11 NZ_JPQY01000039.1 RefSeq gene 13660 15399 . - . ID=gene-IY40_RS21025;Name=IY40_RS21025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS21025;old_locus_tag=IY40_21385 NZ_JPQY01000039.1 Protein Homology CDS 13660 15399 . - 0 ID=cds-WP_038629655.1;Parent=gene-IY40_RS21025;Dbxref=GenBank:WP_038629655.1;Name=WP_038629655.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002443680.1;locus_tag=IY40_RS21025;product=fatty acyl-AMP ligase;protein_id=WP_038629655.1;transl_table=11 NZ_JPQY01000039.1 RefSeq gene 16138 17262 . + . ID=gene-IY40_RS21030;Name=IY40_RS21030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS21030;old_locus_tag=IY40_21390 NZ_JPQY01000039.1 Protein Homology CDS 16138 17262 . + 0 ID=cds-WP_043143083.1;Parent=gene-IY40_RS21030;Dbxref=GenBank:WP_043143083.1;Name=WP_043143083.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004935531.1;locus_tag=IY40_RS21030;product=hypothetical protein;protein_id=WP_043143083.1;transl_table=11 NZ_JPQY01000039.1 RefSeq gene 17482 17847 . + . ID=gene-IY40_RS21035;Name=IY40_RS21035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS21035;old_locus_tag=IY40_21395 NZ_JPQY01000039.1 Protein Homology CDS 17482 17847 . + 0 ID=cds-WP_004935528.1;Parent=gene-IY40_RS21035;Dbxref=GenBank:WP_004935528.1;Name=WP_004935528.1;Ontology_term=GO:0006654,GO:0008654,GO:0016310,GO:0004143,GO:0005524,GO:0046872,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP-dependent diacylglycerol kinase activity|0004143||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=phosphatidic acid biosynthetic process|0006654||IEA,phospholipid biosynthetic process|0008654||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004935528.1;locus_tag=IY40_RS21035;product=diacylglycerol kinase;protein_id=WP_004935528.1;transl_table=11 NZ_JPQY01000039.1 RefSeq gene 17951 18850 . + . ID=gene-IY40_RS21040;Name=IY40_RS21040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS21040;old_locus_tag=IY40_21400 NZ_JPQY01000039.1 Protein Homology CDS 17951 18850 . + 0 ID=cds-WP_043143085.1;Parent=gene-IY40_RS21040;Dbxref=GenBank:WP_043143085.1;Name=WP_043143085.1;Ontology_term=GO:0003677,GO:0003700,GO:0005829;gbkey=CDS;go_component=cytosol|0005829||IEA;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014332944.1;locus_tag=IY40_RS21040;product=LysR family transcriptional regulator;protein_id=WP_043143085.1;transl_table=11 NZ_JPQY01000039.1 RefSeq gene 18825 19631 . - . ID=gene-IY40_RS21045;Name=IY40_RS21045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS21045;old_locus_tag=IY40_21405 NZ_JPQY01000039.1 Protein Homology CDS 18825 19631 . - 0 ID=cds-WP_043143087.1;Parent=gene-IY40_RS21045;Dbxref=GenBank:WP_043143087.1;Name=WP_043143087.1;Ontology_term=GO:0005488;gbkey=CDS;go_function=binding|0005488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012145898.1;locus_tag=IY40_RS21045;product=substrate-binding domain-containing protein;protein_id=WP_043143087.1;transl_table=11 NZ_JPQY01000039.1 RefSeq gene 19658 20953 . - . ID=gene-IY40_RS21050;Name=tcuC;gbkey=Gene;gene=tcuC;gene_biotype=protein_coding;locus_tag=IY40_RS21050;old_locus_tag=IY40_21410 NZ_JPQY01000039.1 Protein Homology CDS 19658 20953 . - 0 ID=cds-WP_043143090.1;Parent=gene-IY40_RS21050;Dbxref=GenBank:WP_043143090.1;Name=WP_043143090.1;gbkey=CDS;gene=tcuC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004935508.1;locus_tag=IY40_RS21050;product=MFS transporter;protein_id=WP_043143090.1;transl_table=11 NZ_JPQY01000039.1 RefSeq gene 21392 21745 . + . ID=gene-IY40_RS21055;Name=IY40_RS21055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS21055;old_locus_tag=IY40_21415 NZ_JPQY01000039.1 Protein Homology CDS 21392 21745 . + 0 ID=cds-WP_025303493.1;Parent=gene-IY40_RS21055;Dbxref=GenBank:WP_025303493.1;Name=WP_025303493.1;Ontology_term=GO:0004519,GO:0090729,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=endonuclease activity|0004519||IEA,toxin activity|0090729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003842123.1;locus_tag=IY40_RS21055;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_025303493.1;transl_table=11 NZ_JPQY01000039.1 RefSeq gene 21750 22052 . + . ID=gene-IY40_RS21060;Name=IY40_RS21060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS21060;old_locus_tag=IY40_21420 NZ_JPQY01000039.1 Protein Homology CDS 21750 22052 . + 0 ID=cds-WP_016927038.1;Parent=gene-IY40_RS21060;Dbxref=GenBank:WP_016927038.1;Name=WP_016927038.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000533828.1;locus_tag=IY40_RS21060;product=helix-turn-helix domain-containing protein;protein_id=WP_016927038.1;transl_table=11 NZ_JPQY01000039.1 RefSeq gene 22477 23685 . + . ID=gene-IY40_RS21065;Name=IY40_RS21065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS21065;old_locus_tag=IY40_21425 NZ_JPQY01000039.1 Protein Homology CDS 22477 23685 . + 0 ID=cds-WP_043143093.1;Parent=gene-IY40_RS21065;Dbxref=GenBank:WP_043143093.1;Name=WP_043143093.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224772.1;locus_tag=IY40_RS21065;product=aldose 1-epimerase family protein;protein_id=WP_043143093.1;transl_table=11 NZ_JPQY01000039.1 RefSeq gene 23759 23834 . - . ID=gene-IY40_RS21070;Name=IY40_RS21070;gbkey=Gene;gene_biotype=tRNA;locus_tag=IY40_RS21070;old_locus_tag=IY40_21430 NZ_JPQY01000039.1 tRNAscan-SE tRNA 23759 23834 . - . ID=rna-IY40_RS21070;Parent=gene-IY40_RS21070;anticodon=(pos:complement(23799..23801));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=IY40_RS21070;product=tRNA-Asn NZ_JPQY01000039.1 tRNAscan-SE exon 23759 23834 . - . ID=exon-IY40_RS21070-1;Parent=rna-IY40_RS21070;anticodon=(pos:complement(23799..23801));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=IY40_RS21070;product=tRNA-Asn NZ_JPQY01000039.1 RefSeq gene 24291 25409 . + . ID=gene-IY40_RS21075;Name=IY40_RS21075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS21075;old_locus_tag=IY40_21435 NZ_JPQY01000039.1 Protein Homology CDS 24291 25409 . + 0 ID=cds-WP_016927040.1;Parent=gene-IY40_RS21075;Dbxref=GenBank:WP_016927040.1;Name=WP_016927040.1;Ontology_term=GO:0015803,GO:0055085,GO:0015658,GO:0022857,GO:0140359;gbkey=CDS;go_function=branched-chain amino acid transmembrane transporter activity|0015658||IEA,transmembrane transporter activity|0022857||IEA,ABC-type transporter activity|0140359||IEA;go_process=branched-chain amino acid transport|0015803||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006319839.1;locus_tag=IY40_RS21075;product=branched-chain amino acid ABC transporter substrate-binding protein;protein_id=WP_016927040.1;transl_table=11 NZ_JPQY01000039.1 RefSeq gene 25535 26449 . + . ID=gene-IY40_RS21080;Name=IY40_RS21080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS21080;old_locus_tag=IY40_21440 NZ_JPQY01000039.1 Protein Homology CDS 25535 26449 . + 0 ID=cds-WP_004928592.1;Parent=gene-IY40_RS21080;Dbxref=GenBank:WP_004928592.1;Name=WP_004928592.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227595.1;locus_tag=IY40_RS21080;product=ABC transporter permease subunit;protein_id=WP_004928592.1;transl_table=11 NZ_JPQY01000039.1 RefSeq gene 26460 27746 . + . ID=gene-IY40_RS21085;Name=livM;gbkey=Gene;gene=livM;gene_biotype=protein_coding;locus_tag=IY40_RS21085;old_locus_tag=IY40_21445 NZ_JPQY01000039.1 Protein Homology CDS 26460 27746 . + 0 ID=cds-WP_043143096.1;Parent=gene-IY40_RS21085;Dbxref=GenBank:WP_043143096.1;Name=WP_043143096.1;Ontology_term=GO:0055085,GO:0015658,GO:0016020;gbkey=CDS;gene=livM;go_component=membrane|0016020||IEA;go_function=branched-chain amino acid transmembrane transporter activity|0015658||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004946910.1;locus_tag=IY40_RS21085;product=high-affinity branched-chain amino acid ABC transporter permease LivM;protein_id=WP_043143096.1;transl_table=11 NZ_JPQY01000039.1 RefSeq gene 27743 28618 . + . ID=gene-IY40_RS21090;Name=IY40_RS21090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS21090;old_locus_tag=IY40_21450 NZ_JPQY01000039.1 Protein Homology CDS 27743 28618 . + 0 ID=cds-WP_025303490.1;Parent=gene-IY40_RS21090;Dbxref=GenBank:WP_025303490.1;Name=WP_025303490.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019452438.1;locus_tag=IY40_RS21090;product=ABC transporter ATP-binding protein;protein_id=WP_025303490.1;transl_table=11 NZ_JPQY01000039.1 RefSeq gene 28615 29331 . + . ID=gene-IY40_RS21095;Name=IY40_RS21095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS21095;old_locus_tag=IY40_21455 NZ_JPQY01000039.1 Protein Homology CDS 28615 29331 . + 0 ID=cds-WP_004928599.1;Parent=gene-IY40_RS21095;Dbxref=GenBank:WP_004928599.1;Name=WP_004928599.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004928599.1;locus_tag=IY40_RS21095;product=ABC transporter ATP-binding protein;protein_id=WP_004928599.1;transl_table=11 NZ_JPQY01000039.1 RefSeq gene 29361 29783 . - . ID=gene-IY40_RS21100;Name=IY40_RS21100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS21100;old_locus_tag=IY40_21460 NZ_JPQY01000039.1 Protein Homology CDS 29361 29783 . - 0 ID=cds-WP_043143098.1;Parent=gene-IY40_RS21100;Dbxref=GenBank:WP_043143098.1;Name=WP_043143098.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004928603.1;locus_tag=IY40_RS21100;product=winged helix-turn-helix transcriptional regulator;protein_id=WP_043143098.1;transl_table=11 NZ_JPQY01000039.1 RefSeq gene 29870 30817 . + . ID=gene-IY40_RS21105;Name=IY40_RS21105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS21105;old_locus_tag=IY40_21465 NZ_JPQY01000039.1 Protein Homology CDS 29870 30817 . + 0 ID=cds-WP_043143100.1;Parent=gene-IY40_RS21105;Dbxref=GenBank:WP_043143100.1;Name=WP_043143100.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016927045.1;locus_tag=IY40_RS21105;product=aromatic alcohol reductase;protein_id=WP_043143100.1;transl_table=11 NZ_JPQY01000039.1 RefSeq gene 30835 31521 . - . ID=gene-IY40_RS21110;Name=IY40_RS21110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS21110;old_locus_tag=IY40_21470 NZ_JPQY01000039.1 Protein Homology CDS 30835 31521 . - 0 ID=cds-WP_043143103.1;Parent=gene-IY40_RS21110;Dbxref=GenBank:WP_043143103.1;Name=WP_043143103.1;Ontology_term=GO:0018193;gbkey=CDS;go_process=peptidyl-amino acid modification|0018193||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013813732.1;locus_tag=IY40_RS21110;product=aspartyl/asparaginyl beta-hydroxylase domain-containing protein;protein_id=WP_043143103.1;transl_table=11 NZ_JPQY01000039.1 RefSeq gene 31790 32980 . + . ID=gene-IY40_RS21115;Name=IY40_RS21115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS21115;old_locus_tag=IY40_21475 NZ_JPQY01000039.1 Protein Homology CDS 31790 32980 . + 0 ID=cds-WP_025303485.1;Parent=gene-IY40_RS21115;Dbxref=GenBank:WP_025303485.1;Name=WP_025303485.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019452444.1;locus_tag=IY40_RS21115;product=sugar transporter;protein_id=WP_025303485.1;transl_table=11 NZ_JPQY01000039.1 RefSeq gene 33155 34549 . + . ID=gene-IY40_RS21120;Name=IY40_RS21120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS21120;old_locus_tag=IY40_21480 NZ_JPQY01000039.1 Protein Homology CDS 33155 34549 . + 0 ID=cds-WP_200877953.1;Parent=gene-IY40_RS21120;Dbxref=GenBank:WP_200877953.1;Name=WP_200877953.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015378463.1;locus_tag=IY40_RS21120;product=MFS transporter;protein_id=WP_200877953.1;transl_table=11 NZ_JPQY01000039.1 RefSeq gene 34692 35522 . + . ID=gene-IY40_RS21125;Name=IY40_RS21125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS21125;old_locus_tag=IY40_21485 NZ_JPQY01000039.1 Protein Homology CDS 34692 35522 . + 0 ID=cds-WP_043143107.1;Parent=gene-IY40_RS21125;Dbxref=GenBank:WP_043143107.1;Name=WP_043143107.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004928620.1;locus_tag=IY40_RS21125;product=alpha/beta fold hydrolase;protein_id=WP_043143107.1;transl_table=11 NZ_JPQY01000039.1 RefSeq gene 35532 35957 . + . ID=gene-IY40_RS21130;Name=IY40_RS21130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS21130;old_locus_tag=IY40_21490 NZ_JPQY01000039.1 Protein Homology CDS 35532 35957 . + 0 ID=cds-WP_043143109.1;Parent=gene-IY40_RS21130;Dbxref=GenBank:WP_043143109.1;Name=WP_043143109.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016927050.1;locus_tag=IY40_RS21130;product=DoxX family protein;protein_id=WP_043143109.1;transl_table=11 NZ_JPQY01000039.1 RefSeq gene 35950 37560 . + . ID=gene-IY40_RS21135;Name=IY40_RS21135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS21135;old_locus_tag=IY40_21495 NZ_JPQY01000039.1 Protein Homology CDS 35950 37560 . + 0 ID=cds-WP_043143111.1;Parent=gene-IY40_RS21135;Dbxref=GenBank:WP_043143111.1;Name=WP_043143111.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004928627.1;locus_tag=IY40_RS21135;product=MFS transporter;protein_id=WP_043143111.1;transl_table=11 NZ_JPQY01000039.1 RefSeq gene 37657 38709 . + . ID=gene-IY40_RS21140;Name=IY40_RS21140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS21140;old_locus_tag=IY40_21500 NZ_JPQY01000039.1 Protein Homology CDS 37657 38709 . + 0 ID=cds-WP_043143113.1;Parent=gene-IY40_RS21140;Dbxref=GenBank:WP_043143113.1;Name=WP_043143113.1;Ontology_term=GO:0004497,GO:0010181,GO:0016703;gbkey=CDS;go_function=monooxygenase activity|0004497||IEA,FMN binding|0010181||IEA,oxidoreductase activity%2C acting on single donors with incorporation of molecular oxygen%2C incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases)|0016703||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016927052.1;locus_tag=IY40_RS21140;product=NAD(P)H-dependent flavin oxidoreductase;protein_id=WP_043143113.1;transl_table=11 NZ_JPQY01000039.1 RefSeq gene 38917 39192 . - . ID=gene-IY40_RS25505;Name=IY40_RS25505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS25505 NZ_JPQY01000039.1 Protein Homology CDS 38917 39192 . - 0 ID=cds-WP_071796825.1;Parent=gene-IY40_RS25505;Dbxref=GenBank:WP_071796825.1;Name=WP_071796825.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000564705.1;locus_tag=IY40_RS25505;product=hypothetical protein;protein_id=WP_071796825.1;transl_table=11 NZ_JPQY01000039.1 RefSeq gene 39208 41517 . - . ID=gene-IY40_RS26400;Name=IY40_RS26400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS26400 NZ_JPQY01000039.1 Protein Homology CDS 39208 41517 . - 0 ID=cds-WP_235211383.1;Parent=gene-IY40_RS26400;Dbxref=GenBank:WP_235211383.1;Name=WP_235211383.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015377592.1;locus_tag=IY40_RS26400;product=S-type pyocin domain-containing protein;protein_id=WP_235211383.1;transl_table=11 NZ_JPQY01000039.1 RefSeq gene 41576 42736 . - . ID=gene-IY40_RS21150;Name=IY40_RS21150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS21150;old_locus_tag=IY40_21510 NZ_JPQY01000039.1 Protein Homology CDS 41576 42736 . - 0 ID=cds-WP_043143116.1;Parent=gene-IY40_RS21150;Dbxref=GenBank:WP_043143116.1;Name=WP_043143116.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015705900.1;locus_tag=IY40_RS21150;product=tail fiber domain-containing protein;protein_id=WP_043143116.1;transl_table=11 NZ_JPQY01000039.1 RefSeq gene 43156 44538 . - . ID=gene-IY40_RS21155;Name=IY40_RS21155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS21155;old_locus_tag=IY40_21515 NZ_JPQY01000039.1 Protein Homology CDS 43156 44538 . - 0 ID=cds-WP_043143118.1;Parent=gene-IY40_RS21155;Dbxref=GenBank:WP_043143118.1;Name=WP_043143118.1;Ontology_term=GO:0006508,GO:0004222,GO:0046872,GO:0005615;gbkey=CDS;go_component=extracellular space|0005615||IEA;go_function=metalloendopeptidase activity|0004222||IEA,metal ion binding|0046872||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004928633.1;locus_tag=IY40_RS21155;product=serralysin family metalloprotease;protein_id=WP_043143118.1;transl_table=11 NZ_JPQY01000039.1 RefSeq gene 45041 46330 . - . ID=gene-IY40_RS21160;Name=IY40_RS21160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS21160;old_locus_tag=IY40_21520 NZ_JPQY01000039.1 Protein Homology CDS 45041 46330 . - 0 ID=cds-WP_043143120.1;Parent=gene-IY40_RS21160;Dbxref=GenBank:WP_043143120.1;Name=WP_043143120.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019452450.1;locus_tag=IY40_RS21160;product=alginate export family protein;protein_id=WP_043143120.1;transl_table=11 NZ_JPQY01000039.1 RefSeq gene 46372 47169 . - . ID=gene-IY40_RS21165;Name=IY40_RS21165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS21165;old_locus_tag=IY40_21525 NZ_JPQY01000039.1 Protein Homology CDS 46372 47169 . - 0 ID=cds-WP_200877954.1;Parent=gene-IY40_RS21165;Dbxref=GenBank:WP_200877954.1;Name=WP_200877954.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016927055.1;locus_tag=IY40_RS21165;product=VOC family protein;protein_id=WP_200877954.1;transl_table=11 NZ_JPQY01000039.1 RefSeq gene 47800 49995 . - . ID=gene-IY40_RS21170;Name=katG;gbkey=Gene;gene=katG;gene_biotype=protein_coding;locus_tag=IY40_RS21170;old_locus_tag=IY40_21530 NZ_JPQY01000039.1 Protein Homology CDS 47800 49995 . - 0 ID=cds-WP_043143123.1;Parent=gene-IY40_RS21170;Dbxref=GenBank:WP_043143123.1;Name=WP_043143123.1;Ontology_term=GO:0006979,GO:0004096,GO:0004601,GO:0020037;gbkey=CDS;gene=katG;go_function=catalase activity|0004096||IEA,peroxidase activity|0004601||IEA,heme binding|0020037||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019452452.1;locus_tag=IY40_RS21170;product=catalase/peroxidase HPI;protein_id=WP_043143123.1;transl_table=11 NZ_JPQY01000039.1 RefSeq gene 50255 51679 . - . ID=gene-IY40_RS21175;Name=IY40_RS21175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS21175;old_locus_tag=IY40_21535 NZ_JPQY01000039.1 Protein Homology CDS 50255 51679 . - 0 ID=cds-WP_043143125.1;Parent=gene-IY40_RS21175;Dbxref=GenBank:WP_043143125.1;Name=WP_043143125.1;Ontology_term=GO:0006081,GO:0050269;gbkey=CDS;go_function=coniferyl-aldehyde dehydrogenase [NAD(P)+] activity|0050269||IEA;go_process=aldehyde metabolic process|0006081||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015378453.1;locus_tag=IY40_RS21175;product=coniferyl aldehyde dehydrogenase;protein_id=WP_043143125.1;transl_table=11 NZ_JPQY01000039.1 RefSeq gene 51884 52714 . + . ID=gene-IY40_RS21180;Name=IY40_RS21180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS21180;old_locus_tag=IY40_21540 NZ_JPQY01000039.1 Protein Homology CDS 51884 52714 . + 0 ID=cds-WP_025303474.1;Parent=gene-IY40_RS21180;Dbxref=GenBank:WP_025303474.1;Name=WP_025303474.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013509097.1;locus_tag=IY40_RS21180;product=alpha/beta fold hydrolase;protein_id=WP_025303474.1;transl_table=11 NZ_JPQY01000039.1 RefSeq gene 52782 53714 . + . ID=gene-IY40_RS21185;Name=IY40_RS21185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS21185;old_locus_tag=IY40_21545 NZ_JPQY01000039.1 Protein Homology CDS 52782 53714 . + 0 ID=cds-WP_043143127.1;Parent=gene-IY40_RS21185;Dbxref=GenBank:WP_043143127.1;Name=WP_043143127.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016927062.1;locus_tag=IY40_RS21185;product=NAD-dependent epimerase/dehydratase family protein;protein_id=WP_043143127.1;transl_table=11 NZ_JPQY01000039.1 RefSeq gene 53847 54899 . - . ID=gene-IY40_RS21190;Name=IY40_RS21190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS21190;old_locus_tag=IY40_21550 NZ_JPQY01000039.1 Protein Homology CDS 53847 54899 . - 0 ID=cds-WP_025303472.1;Parent=gene-IY40_RS21190;Dbxref=GenBank:WP_025303472.1;Name=WP_025303472.1;Ontology_term=GO:0015288,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=porin activity|0015288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016927063.1;locus_tag=IY40_RS21190;product=porin;protein_id=WP_025303472.1;transl_table=11 NZ_JPQY01000039.1 RefSeq gene 54954 55796 . - . ID=gene-IY40_RS21195;Name=amiA;gbkey=Gene;gene=amiA;gene_biotype=protein_coding;locus_tag=IY40_RS21195;old_locus_tag=IY40_21555 NZ_JPQY01000039.1 Protein Homology CDS 54954 55796 . - 0 ID=cds-WP_043143191.1;Parent=gene-IY40_RS21195;Dbxref=GenBank:WP_043143191.1;Name=WP_043143191.1;Ontology_term=GO:0009253,GO:0008745;gbkey=CDS;gene=amiA;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000102888.1;locus_tag=IY40_RS21195;product=N-acetylmuramoyl-L-alanine amidase AmiA;protein_id=WP_043143191.1;transl_table=11 NZ_JPQY01000039.1 RefSeq gene 56131 57501 . + . ID=gene-IY40_RS21200;Name=IY40_RS21200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS21200;old_locus_tag=IY40_21560 NZ_JPQY01000039.1 Protein Homology CDS 56131 57501 . + 0 ID=cds-WP_025303470.1;Parent=gene-IY40_RS21200;Dbxref=GenBank:WP_025303470.1;Name=WP_025303470.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016927065.1;locus_tag=IY40_RS21200;product=MFS transporter;protein_id=WP_025303470.1;transl_table=11 NZ_JPQY01000039.1 RefSeq gene 57554 57916 . + . ID=gene-IY40_RS21205;Name=IY40_RS21205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS21205;old_locus_tag=IY40_21565 NZ_JPQY01000039.1 Protein Homology CDS 57554 57916 . + 0 ID=cds-WP_016927066.1;Parent=gene-IY40_RS21205;Dbxref=GenBank:WP_016927066.1;Name=WP_016927066.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016927066.1;locus_tag=IY40_RS21205;product=hypothetical protein;protein_id=WP_016927066.1;transl_table=11 NZ_JPQY01000039.1 RefSeq gene 57963 59039 . + . ID=gene-IY40_RS21210;Name=IY40_RS21210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS21210;old_locus_tag=IY40_21570 NZ_JPQY01000039.1 Protein Homology CDS 57963 59039 . + 0 ID=cds-WP_212637287.1;Parent=gene-IY40_RS21210;Dbxref=GenBank:WP_212637287.1;Name=WP_212637287.1;Ontology_term=GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016927067.1;locus_tag=IY40_RS21210;product=ABC transporter substrate-binding protein;protein_id=WP_212637287.1;transl_table=11 NZ_JPQY01000039.1 RefSeq gene 59082 60092 . + . ID=gene-IY40_RS21215;Name=IY40_RS21215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS21215;old_locus_tag=IY40_21575 NZ_JPQY01000039.1 Protein Homology CDS 59082 60092 . + 0 ID=cds-WP_043143129.1;Parent=gene-IY40_RS21215;Dbxref=GenBank:WP_043143129.1;Name=WP_043143129.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016927068.1;locus_tag=IY40_RS21215;product=FecCD family ABC transporter permease;protein_id=WP_043143129.1;transl_table=11 NZ_JPQY01000039.1 RefSeq gene 60079 60846 . + . ID=gene-IY40_RS21220;Name=IY40_RS21220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS21220;old_locus_tag=IY40_21580 NZ_JPQY01000039.1 Protein Homology CDS 60079 60846 . + 0 ID=cds-WP_043143131.1;Parent=gene-IY40_RS21220;Dbxref=GenBank:WP_043143131.1;Name=WP_043143131.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016927069.1;locus_tag=IY40_RS21220;product=ABC transporter ATP-binding protein;protein_id=WP_043143131.1;transl_table=11 NZ_JPQY01000039.1 RefSeq gene 60949 61824 . + . ID=gene-IY40_RS21225;Name=hchA;gbkey=Gene;gene=hchA;gene_biotype=protein_coding;locus_tag=IY40_RS21225;old_locus_tag=IY40_21585 NZ_JPQY01000039.1 Protein Homology CDS 60949 61824 . + 0 ID=cds-WP_043143133.1;Parent=gene-IY40_RS21225;Dbxref=GenBank:WP_043143133.1;Name=WP_043143133.1;Ontology_term=GO:0036524;gbkey=CDS;gene=hchA;go_function=protein deglycase activity|0036524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019452455.1;locus_tag=IY40_RS21225;product=glyoxalase III HchA;protein_id=WP_043143133.1;transl_table=11 NZ_JPQY01000039.1 RefSeq gene 61821 62549 . + . ID=gene-IY40_RS21230;Name=IY40_RS21230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS21230;old_locus_tag=IY40_21590 NZ_JPQY01000039.1 Protein Homology CDS 61821 62549 . + 0 ID=cds-WP_043143135.1;Parent=gene-IY40_RS21230;Dbxref=GenBank:WP_043143135.1;Name=WP_043143135.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004928651.1;locus_tag=IY40_RS21230;product=PA1136 family autoinducer-binding transcriptional regulator;protein_id=WP_043143135.1;transl_table=11 NZ_JPQY01000039.1 RefSeq gene 62546 63436 . - . ID=gene-IY40_RS21235;Name=IY40_RS21235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS21235;old_locus_tag=IY40_21595 NZ_JPQY01000039.1 Protein Homology CDS 62546 63436 . - 0 ID=cds-WP_025303464.1;Parent=gene-IY40_RS21235;Dbxref=GenBank:WP_025303464.1;Name=WP_025303464.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004928653.1;locus_tag=IY40_RS21235;product=LysR substrate-binding domain-containing protein;protein_id=WP_025303464.1;transl_table=11 NZ_JPQY01000039.1 RefSeq gene 63566 64138 . + . ID=gene-IY40_RS21240;Name=IY40_RS21240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS21240;old_locus_tag=IY40_21600 NZ_JPQY01000039.1 Protein Homology CDS 63566 64138 . + 0 ID=cds-WP_043143137.1;Parent=gene-IY40_RS21240;Dbxref=GenBank:WP_043143137.1;Name=WP_043143137.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016927073.1;locus_tag=IY40_RS21240;product=hypothetical protein;protein_id=WP_043143137.1;transl_table=11 NZ_JPQY01000039.1 RefSeq gene 65139 65708 . + . ID=gene-IY40_RS26050;Name=IY40_RS26050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS26050 NZ_JPQY01000039.1 GeneMarkS-2+ CDS 65139 65708 . + 0 ID=cds-WP_145957003.1;Parent=gene-IY40_RS26050;Dbxref=GenBank:WP_145957003.1;Name=WP_145957003.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IY40_RS26050;product=hypothetical protein;protein_id=WP_145957003.1;transl_table=11 NZ_JPQY01000039.1 RefSeq gene 65930 66850 . - . ID=gene-IY40_RS21245;Name=IY40_RS21245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS21245;old_locus_tag=IY40_21605 NZ_JPQY01000039.1 Protein Homology CDS 65930 66850 . - 0 ID=cds-WP_043143139.1;Parent=gene-IY40_RS21245;Dbxref=GenBank:WP_043143139.1;Name=WP_043143139.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015378444.1;locus_tag=IY40_RS21245;product=AraC family transcriptional regulator;protein_id=WP_043143139.1;transl_table=11 NZ_JPQY01000039.1 RefSeq gene 66956 67789 . + . ID=gene-IY40_RS21250;Name=IY40_RS21250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS21250;old_locus_tag=IY40_21610 NZ_JPQY01000039.1 Protein Homology CDS 66956 67789 . + 0 ID=cds-WP_043143141.1;Parent=gene-IY40_RS21250;Dbxref=GenBank:WP_043143141.1;Name=WP_043143141.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013366551.1;locus_tag=IY40_RS21250;product=oxidoreductase;protein_id=WP_043143141.1;transl_table=11 NZ_JPQY01000039.1 RefSeq gene 67887 67962 . - . ID=gene-IY40_RS21255;Name=IY40_RS21255;gbkey=Gene;gene_biotype=tRNA;locus_tag=IY40_RS21255;old_locus_tag=IY40_21615 NZ_JPQY01000039.1 tRNAscan-SE tRNA 67887 67962 . - . ID=rna-IY40_RS21255;Parent=gene-IY40_RS21255;anticodon=(pos:complement(67927..67929));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=IY40_RS21255;product=tRNA-Asn NZ_JPQY01000039.1 tRNAscan-SE exon 67887 67962 . - . ID=exon-IY40_RS21255-1;Parent=rna-IY40_RS21255;anticodon=(pos:complement(67927..67929));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=IY40_RS21255;product=tRNA-Asn NZ_JPQY01000039.1 RefSeq gene 68077 71166 . - . ID=gene-IY40_RS21260;Name=IY40_RS21260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS21260;old_locus_tag=IY40_21620 NZ_JPQY01000039.1 Protein Homology CDS 68077 71166 . - 0 ID=cds-WP_043143143.1;Parent=gene-IY40_RS21260;Dbxref=GenBank:WP_043143143.1;Name=WP_043143143.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004940804.1;locus_tag=IY40_RS21260;product=beta-galactosidase;protein_id=WP_043143143.1;transl_table=11 NZ_JPQY01000039.1 RefSeq gene 71269 71955 . - . ID=gene-IY40_RS21265;Name=dpiA;gbkey=Gene;gene=dpiA;gene_biotype=protein_coding;gene_synonym=citB;locus_tag=IY40_RS21265;old_locus_tag=IY40_21625 NZ_JPQY01000039.1 Protein Homology CDS 71269 71955 . - 0 ID=cds-WP_021505854.1;Parent=gene-IY40_RS21265;Dbxref=GenBank:WP_021505854.1;Name=WP_021505854.1;gbkey=CDS;gene=dpiA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004940807.1;locus_tag=IY40_RS21265;product=two-component response regulator DpiA;protein_id=WP_021505854.1;transl_table=11 NZ_JPQY01000039.1 RefSeq gene 72269 73339 . + . ID=gene-IY40_RS21270;Name=citC;gbkey=Gene;gene=citC;gene_biotype=protein_coding;locus_tag=IY40_RS21270;old_locus_tag=IY40_21630 NZ_JPQY01000039.1 Protein Homology CDS 72269 73339 . + 0 ID=cds-WP_004940809.1;Parent=gene-IY40_RS21270;Dbxref=GenBank:WP_004940809.1;Name=WP_004940809.1;Ontology_term=GO:0006101,GO:0008771;gbkey=CDS;gene=citC;go_function=[citrate (pro-3S)-lyase] ligase activity|0008771||IEA;go_process=citrate metabolic process|0006101||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004940809.1;locus_tag=IY40_RS21270;product=[citrate (pro-3S)-lyase] ligase;protein_id=WP_004940809.1;transl_table=11 NZ_JPQY01000039.1 RefSeq gene 73339 73647 . + . ID=gene-IY40_RS21275;Name=citD;gbkey=Gene;gene=citD;gene_biotype=protein_coding;locus_tag=IY40_RS21275;old_locus_tag=IY40_21635 NZ_JPQY01000039.1 Protein Homology CDS 73339 73647 . + 0 ID=cds-WP_004940811.1;Parent=gene-IY40_RS21275;Dbxref=GenBank:WP_004940811.1;Name=WP_004940811.1;Ontology_term=GO:0006113,GO:0008815,GO:0005737,GO:0009346;gbkey=CDS;gene=citD;go_component=cytoplasm|0005737||IEA,ATP-independent citrate lyase complex|0009346||IEA;go_function=citrate (pro-3S)-lyase activity|0008815||IEA;go_process=fermentation|0006113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016927084.1;locus_tag=IY40_RS21275;product=citrate lyase acyl carrier protein;protein_id=WP_004940811.1;transl_table=11 NZ_JPQY01000039.1 RefSeq gene 73631 74551 . + . ID=gene-IY40_RS21280;Name=citE;gbkey=Gene;gene=citE;gene_biotype=protein_coding;locus_tag=IY40_RS21280;old_locus_tag=IY40_21640 NZ_JPQY01000039.1 Protein Homology CDS 73631 74551 . + 0 ID=cds-WP_016927085.1;Parent=gene-IY40_RS21280;Dbxref=GenBank:WP_016927085.1;Name=WP_016927085.1;Ontology_term=GO:0006084,GO:0006113,GO:0008815,GO:0005737,GO:0009346;gbkey=CDS;gene=citE;go_component=cytoplasm|0005737||IEA,ATP-independent citrate lyase complex|0009346||IEA;go_function=citrate (pro-3S)-lyase activity|0008815||IEA;go_process=acetyl-CoA metabolic process|0006084||IEA,fermentation|0006113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015378441.1;locus_tag=IY40_RS21280;product=citrate (pro-3S)-lyase subunit beta;protein_id=WP_016927085.1;transl_table=11 NZ_JPQY01000039.1 RefSeq gene 74551 76056 . + . ID=gene-IY40_RS21285;Name=citF;gbkey=Gene;gene=citF;gene_biotype=protein_coding;locus_tag=IY40_RS21285;old_locus_tag=IY40_21645 NZ_JPQY01000039.1 Protein Homology CDS 74551 76056 . + 0 ID=cds-WP_043143145.1;Parent=gene-IY40_RS21285;Dbxref=GenBank:WP_043143145.1;Name=WP_043143145.1;Ontology_term=GO:0006113,GO:0008814,GO:0008815,GO:0009346;gbkey=CDS;gene=citF;go_component=ATP-independent citrate lyase complex|0009346||IEA;go_function=citrate CoA-transferase activity|0008814||IEA,citrate (pro-3S)-lyase activity|0008815||IEA;go_process=fermentation|0006113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005185532.1;locus_tag=IY40_RS21285;product=citrate lyase subunit alpha;protein_id=WP_043143145.1;transl_table=11 NZ_JPQY01000039.1 RefSeq gene 76060 76608 . + . ID=gene-IY40_RS21290;Name=citX;gbkey=Gene;gene=citX;gene_biotype=protein_coding;locus_tag=IY40_RS21290;old_locus_tag=IY40_21650 NZ_JPQY01000039.1 Protein Homology CDS 76060 76608 . + 0 ID=cds-WP_033635185.1;Parent=gene-IY40_RS21290;Dbxref=GenBank:WP_033635185.1;Name=WP_033635185.1;Ontology_term=GO:0051191,GO:0050519;gbkey=CDS;gene=citX;go_function=holo-citrate lyase synthase activity|0050519||IEA;go_process=prosthetic group biosynthetic process|0051191||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004940818.1;locus_tag=IY40_RS21290;product=citrate lyase holo-[acyl-carrier protein] synthase;protein_id=WP_033635185.1;transl_table=11 NZ_JPQY01000039.1 RefSeq gene 76589 77473 . + . ID=gene-IY40_RS21295;Name=citG;gbkey=Gene;gene=citG;gene_biotype=protein_coding;locus_tag=IY40_RS21295;old_locus_tag=IY40_21655 NZ_JPQY01000039.1 Protein Homology CDS 76589 77473 . + 0 ID=cds-WP_043143148.1;Parent=gene-IY40_RS21295;Dbxref=GenBank:WP_043143148.1;Name=WP_043143148.1;Ontology_term=GO:0016310,GO:0019361,GO:0005524,GO:0046917;gbkey=CDS;gene=citG;go_function=ATP binding|0005524||IEA,triphosphoribosyl-dephospho-CoA synthase activity|0046917||IEA;go_process=phosphorylation|0016310||IEA,2'-(5''-triphosphoribosyl)-3'-dephospho-CoA biosynthetic process|0019361||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015378438.1;locus_tag=IY40_RS21295;product=triphosphoribosyl-dephospho-CoA synthase CitG;protein_id=WP_043143148.1;transl_table=11 NZ_JPQY01000039.1 RefSeq gene 77499 78962 . + . ID=gene-IY40_RS21300;Name=IY40_RS21300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS21300;old_locus_tag=IY40_21660 NZ_JPQY01000039.1 Protein Homology CDS 77499 78962 . + 0 ID=cds-WP_004940821.1;Parent=gene-IY40_RS21300;Dbxref=GenBank:WP_004940821.1;Name=WP_004940821.1;Ontology_term=GO:0022857,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013649676.1;locus_tag=IY40_RS21300;product=anion permease;protein_id=WP_004940821.1;transl_table=11 NZ_JPQY01000039.1 RefSeq gene 79109 80338 . + . ID=gene-IY40_RS21305;Name=agp;gbkey=Gene;gene=agp;gene_biotype=protein_coding;locus_tag=IY40_RS21305;old_locus_tag=IY40_21665 NZ_JPQY01000039.1 Protein Homology CDS 79109 80338 . + 0 ID=cds-WP_043143150.1;Parent=gene-IY40_RS21305;Dbxref=GenBank:WP_043143150.1;Name=WP_043143150.1;gbkey=CDS;gene=agp;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004940823.1;locus_tag=IY40_RS21305;product=bifunctional glucose-1-phosphatase/inositol phosphatase;protein_id=WP_043143150.1;transl_table=11 NZ_JPQY01000039.1 RefSeq gene 80457 80747 . + . ID=gene-IY40_RS21310;Name=IY40_RS21310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS21310;old_locus_tag=IY40_21670 NZ_JPQY01000039.1 Protein Homology CDS 80457 80747 . + 0 ID=cds-WP_015378435.1;Parent=gene-IY40_RS21310;Dbxref=GenBank:WP_015378435.1;Name=WP_015378435.1;Ontology_term=GO:0016779,GO:0046872;gbkey=CDS;go_function=nucleotidyltransferase activity|0016779||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015378435.1;locus_tag=IY40_RS21310;product=nucleotidyltransferase family protein;protein_id=WP_015378435.1;transl_table=11 NZ_JPQY01000039.1 RefSeq gene 80744 81115 . + . ID=gene-IY40_RS21315;Name=IY40_RS21315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS21315;old_locus_tag=IY40_21675 NZ_JPQY01000039.1 Protein Homology CDS 80744 81115 . + 0 ID=cds-WP_043143151.1;Parent=gene-IY40_RS21315;Dbxref=GenBank:WP_043143151.1;Name=WP_043143151.1;Ontology_term=GO:0004540,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=RNA nuclease activity|0004540||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015378434.1;locus_tag=IY40_RS21315;product=HepT-like ribonuclease domain-containing protein;protein_id=WP_043143151.1;transl_table=11 NZ_JPQY01000039.1 RefSeq gene 81123 81842 . + . ID=gene-IY40_RS21320;Name=IY40_RS21320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS21320;old_locus_tag=IY40_21680 NZ_JPQY01000039.1 Protein Homology CDS 81123 81842 . + 0 ID=cds-WP_043143153.1;Parent=gene-IY40_RS21320;Dbxref=GenBank:WP_043143153.1;Name=WP_043143153.1;Ontology_term=GO:0000287,GO:0008897;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,holo-[acyl-carrier-protein] synthase activity|0008897||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015378433.1;locus_tag=IY40_RS21320;product=4'-phosphopantetheinyl transferase family protein;protein_id=WP_043143153.1;transl_table=11 NZ_JPQY01000039.1 RefSeq gene 82033 83223 . + . ID=gene-IY40_RS21325;Name=IY40_RS21325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS21325;old_locus_tag=IY40_21685 NZ_JPQY01000039.1 Protein Homology CDS 82033 83223 . + 0 ID=cds-WP_025303453.1;Parent=gene-IY40_RS21325;Dbxref=GenBank:WP_025303453.1;Name=WP_025303453.1;Ontology_term=GO:0008909;gbkey=CDS;go_function=isochorismate synthase activity|0008909||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004940825.1;locus_tag=IY40_RS21325;product=isochorismate synthase;protein_id=WP_025303453.1;transl_table=11 NZ_JPQY01000039.1 RefSeq gene 83326 84084 . + . ID=gene-IY40_RS21330;Name=dhbA;gbkey=Gene;gene=dhbA;gene_biotype=protein_coding;locus_tag=IY40_RS21330;old_locus_tag=IY40_21690 NZ_JPQY01000039.1 Protein Homology CDS 83326 84084 . + 0 ID=cds-WP_025303452.1;Parent=gene-IY40_RS21330;Dbxref=GenBank:WP_025303452.1;Name=WP_025303452.1;Ontology_term=GO:0019290,GO:0008667;gbkey=CDS;gene=dhbA;go_function=2%2C3-dihydro-2%2C3-dihydroxybenzoate dehydrogenase activity|0008667||IEA;go_process=siderophore biosynthetic process|0019290||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019452472.1;locus_tag=IY40_RS21330;product=2%2C3-dihydro-2%2C3-dihydroxybenzoate dehydrogenase;protein_id=WP_025303452.1;transl_table=11 NZ_JPQY01000039.1 RefSeq gene 84086 84964 . - . ID=gene-IY40_RS21335;Name=rarD;gbkey=Gene;gene=rarD;gene_biotype=protein_coding;locus_tag=IY40_RS21335;old_locus_tag=IY40_21695 NZ_JPQY01000039.1 Protein Homology CDS 84086 84964 . - 0 ID=cds-WP_043143156.1;Parent=gene-IY40_RS21335;Dbxref=GenBank:WP_043143156.1;Name=WP_043143156.1;Ontology_term=GO:0006810,GO:0005215,GO:0005886;gbkey=CDS;gene=rarD;go_component=plasma membrane|0005886||IEA;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015378430.1;locus_tag=IY40_RS21335;product=EamA family transporter RarD;protein_id=WP_043143156.1;transl_table=11 NZ_JPQY01000039.1 RefSeq gene 85104 85751 . + . ID=gene-IY40_RS21340;Name=alkB;gbkey=Gene;gene=alkB;gene_biotype=protein_coding;locus_tag=IY40_RS21340;old_locus_tag=IY40_21700 NZ_JPQY01000039.1 Protein Homology CDS 85104 85751 . + 0 ID=cds-WP_043143158.1;Parent=gene-IY40_RS21340;Dbxref=GenBank:WP_043143158.1;Name=WP_043143158.1;gbkey=CDS;gene=alkB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017893380.1;locus_tag=IY40_RS21340;product=DNA oxidative demethylase AlkB;protein_id=WP_043143158.1;transl_table=11 NZ_JPQY01000039.1 RefSeq gene 85734 86669 . - . ID=gene-IY40_RS21345;Name=IY40_RS21345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS21345;old_locus_tag=IY40_21705 NZ_JPQY01000039.1 Protein Homology CDS 85734 86669 . - 0 ID=cds-WP_043143161.1;Parent=gene-IY40_RS21345;Dbxref=GenBank:WP_043143161.1;Name=WP_043143161.1;Ontology_term=GO:0006355,GO:0001216,GO:0032993;gbkey=CDS;go_component=protein-DNA complex|0032993||IEA;go_function=DNA-binding transcription activator activity|0001216||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004940829.1;locus_tag=IY40_RS21345;product=LysR family transcriptional regulator;protein_id=WP_043143161.1;transl_table=11 NZ_JPQY01000039.1 RefSeq gene 86755 87384 . + . ID=gene-IY40_RS21350;Name=IY40_RS21350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS21350;old_locus_tag=IY40_21710 NZ_JPQY01000039.1 Protein Homology CDS 86755 87384 . + 0 ID=cds-WP_025303448.1;Parent=gene-IY40_RS21350;Dbxref=GenBank:WP_025303448.1;Name=WP_025303448.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004940830.1;locus_tag=IY40_RS21350;product=serine-tRNA(Ala) deacylase AlaX;protein_id=WP_025303448.1;transl_table=11 NZ_JPQY01000039.1 RefSeq gene 87400 87642 . - . ID=gene-IY40_RS21355;Name=IY40_RS21355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS21355;old_locus_tag=IY40_21715 NZ_JPQY01000039.1 Protein Homology CDS 87400 87642 . - 0 ID=cds-WP_025303447.1;Parent=gene-IY40_RS21355;Dbxref=GenBank:WP_025303447.1;Name=WP_025303447.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016927098.1;locus_tag=IY40_RS21355;product=hypothetical protein;protein_id=WP_025303447.1;transl_table=11 NZ_JPQY01000039.1 RefSeq gene 87884 89443 . + . ID=gene-IY40_RS21360;Name=IY40_RS21360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS21360;old_locus_tag=IY40_21720 NZ_JPQY01000039.1 Protein Homology CDS 87884 89443 . + 0 ID=cds-WP_235211384.1;Parent=gene-IY40_RS21360;Dbxref=GenBank:WP_235211384.1;Name=WP_235211384.1;Ontology_term=GO:0055085,GO:0043190;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015378426.1;locus_tag=IY40_RS21360;product=TIGR04028 family ABC transporter substrate-binding protein;protein_id=WP_235211384.1;transl_table=11 NZ_JPQY01000039.1 RefSeq gene 89453 90397 . + . ID=gene-IY40_RS21365;Name=IY40_RS21365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS21365;old_locus_tag=IY40_21725 NZ_JPQY01000039.1 Protein Homology CDS 89453 90397 . + 0 ID=cds-WP_025303445.1;Parent=gene-IY40_RS21365;Dbxref=GenBank:WP_025303445.1;Name=WP_025303445.1;Ontology_term=GO:0055085;gbkey=CDS;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013813699.1;locus_tag=IY40_RS21365;product=ABC transporter permease;protein_id=WP_025303445.1;transl_table=11 NZ_JPQY01000039.1 RefSeq gene 90394 91284 . + . ID=gene-IY40_RS21370;Name=IY40_RS21370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS21370;old_locus_tag=IY40_21730 NZ_JPQY01000039.1 Protein Homology CDS 90394 91284 . + 0 ID=cds-WP_043143166.1;Parent=gene-IY40_RS21370;Dbxref=GenBank:WP_043143166.1;Name=WP_043143166.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004940835.1;locus_tag=IY40_RS21370;product=ABC transporter permease;protein_id=WP_043143166.1;transl_table=11 NZ_JPQY01000039.1 RefSeq gene 91281 92939 . + . ID=gene-IY40_RS21375;Name=IY40_RS21375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS21375;old_locus_tag=IY40_21735 NZ_JPQY01000039.1 Protein Homology CDS 91281 92939 . + 0 ID=cds-WP_043143168.1;Parent=gene-IY40_RS21375;Dbxref=GenBank:WP_043143168.1;Name=WP_043143168.1;Ontology_term=GO:0015833,GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;go_process=peptide transport|0015833||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015378424.1;locus_tag=IY40_RS21375;product=dipeptide ABC transporter ATP-binding protein;protein_id=WP_043143168.1;transl_table=11 NZ_JPQY01000039.1 RefSeq gene 92936 93979 . + . ID=gene-IY40_RS21380;Name=IY40_RS21380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS21380;old_locus_tag=IY40_21740 NZ_JPQY01000039.1 Protein Homology CDS 92936 93979 . + 0 ID=cds-WP_043143170.1;Parent=gene-IY40_RS21380;Dbxref=GenBank:WP_043143170.1;Name=WP_043143170.1;Ontology_term=GO:0016705;gbkey=CDS;go_function=oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen|0016705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020453894.1;locus_tag=IY40_RS21380;product=putative FMN-dependent luciferase-like monooxygenase;protein_id=WP_043143170.1;transl_table=11 NZ_JPQY01000039.1 RefSeq gene 93976 95088 . + . ID=gene-IY40_RS21385;Name=IY40_RS21385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS21385;old_locus_tag=IY40_21745 NZ_JPQY01000039.1 Protein Homology CDS 93976 95088 . + 0 ID=cds-WP_043143172.1;Parent=gene-IY40_RS21385;Dbxref=GenBank:WP_043143172.1;Name=WP_043143172.1;Ontology_term=GO:0051920;gbkey=CDS;go_function=peroxiredoxin activity|0051920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015378422.1;locus_tag=IY40_RS21385;product=alkylhydroperoxidase domain protein;protein_id=WP_043143172.1;transl_table=11 NZ_JPQY01000039.1 RefSeq gene 95173 97086 . - . ID=gene-IY40_RS21390;Name=IY40_RS21390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS21390;old_locus_tag=IY40_21750 NZ_JPQY01000039.1 Protein Homology CDS 95173 97086 . - 0 ID=cds-WP_043143174.1;Parent=gene-IY40_RS21390;Dbxref=GenBank:WP_043143174.1;Name=WP_043143174.1;Ontology_term=GO:0042918,GO:0042626,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=alkanesulfonate transmembrane transport|0042918||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004940841.1;locus_tag=IY40_RS21390;product=aliphatic sulfonate ABC transporter substrate-binding protein;protein_id=WP_043143174.1;transl_table=11 NZ_JPQY01000039.1 RefSeq gene 97364 98536 . + . ID=gene-IY40_RS21395;Name=ssuD;gbkey=Gene;gene=ssuD;gene_biotype=protein_coding;locus_tag=IY40_RS21395;old_locus_tag=IY40_21755 NZ_JPQY01000039.1 Protein Homology CDS 97364 98536 . + 0 ID=cds-WP_043143175.1;Parent=gene-IY40_RS21395;Dbxref=GenBank:WP_043143175.1;Name=WP_043143175.1;Ontology_term=GO:0006790,GO:0008726,GO:0010181;gbkey=CDS;gene=ssuD;go_function=alkanesulfonate monooxygenase activity|0008726||IEA,FMN binding|0010181||IEA;go_process=sulfur compound metabolic process|0006790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015378420.1;locus_tag=IY40_RS21395;product=FMNH2-dependent alkanesulfonate monooxygenase;protein_id=WP_043143175.1;transl_table=11 NZ_JPQY01000039.1 RefSeq gene 98536 99915 . + . ID=gene-IY40_RS21400;Name=IY40_RS21400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS21400;old_locus_tag=IY40_21760 NZ_JPQY01000039.1 Protein Homology CDS 98536 99915 . + 0 ID=cds-WP_043143176.1;Parent=gene-IY40_RS21400;Dbxref=GenBank:WP_043143176.1;Name=WP_043143176.1;Ontology_term=GO:0000166;gbkey=CDS;go_function=nucleotide binding|0000166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016927107.1;locus_tag=IY40_RS21400;product=FAD/NAD(P)-binding protein;protein_id=WP_043143176.1;transl_table=11 NZ_JPQY01000039.1 RefSeq gene 100000 101406 . + . ID=gene-IY40_RS21405;Name=IY40_RS21405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS21405;old_locus_tag=IY40_21765 NZ_JPQY01000039.1 Protein Homology CDS 100000 101406 . + 0 ID=cds-WP_025303423.1;Parent=gene-IY40_RS21405;Dbxref=GenBank:WP_025303423.1;Name=WP_025303423.1;Ontology_term=GO:0010181,GO:0016491;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004940847.1;locus_tag=IY40_RS21405;product=LLM class flavin-dependent oxidoreductase;protein_id=WP_025303423.1;transl_table=11 NZ_JPQY01000039.1 RefSeq gene 101414 102433 . + . ID=gene-IY40_RS21410;Name=IY40_RS21410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS21410;old_locus_tag=IY40_21770 NZ_JPQY01000039.1 Protein Homology CDS 101414 102433 . + 0 ID=cds-WP_043143177.1;Parent=gene-IY40_RS21410;Dbxref=GenBank:WP_043143177.1;Name=WP_043143177.1;Ontology_term=GO:0048473,GO:0005524,GO:0016887,GO:0033232,GO:0042626;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ABC-type D-methionine transporter activity|0033232||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=D-methionine transmembrane transport|0048473||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020317275.1;locus_tag=IY40_RS21410;product=methionine ABC transporter ATP-binding protein;protein_id=WP_043143177.1;transl_table=11 NZ_JPQY01000039.1 RefSeq gene 102430 103134 . + . ID=gene-IY40_RS21415;Name=IY40_RS21415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS21415;old_locus_tag=IY40_21775 NZ_JPQY01000039.1 Protein Homology CDS 102430 103134 . + 0 ID=cds-WP_016927110.1;Parent=gene-IY40_RS21415;Dbxref=GenBank:WP_016927110.1;Name=WP_016927110.1;Ontology_term=GO:0048473,GO:0033232,GO:0042626;gbkey=CDS;go_function=ABC-type D-methionine transporter activity|0033232||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=D-methionine transmembrane transport|0048473||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016927110.1;locus_tag=IY40_RS21415;product=methionine ABC transporter permease;protein_id=WP_016927110.1;transl_table=11 NZ_JPQY01000039.1 RefSeq gene 103137 104012 . + . ID=gene-IY40_RS21420;Name=IY40_RS21420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS21420;old_locus_tag=IY40_21780 NZ_JPQY01000039.1 Protein Homology CDS 103137 104012 . + 0 ID=cds-WP_043143178.1;Parent=gene-IY40_RS21420;Dbxref=GenBank:WP_043143178.1;Name=WP_043143178.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228521.1;locus_tag=IY40_RS21420;product=MetQ/NlpA family ABC transporter substrate-binding protein;protein_id=WP_043143178.1;transl_table=11 NZ_JPQY01000039.1 RefSeq gene 104196 105629 . + . ID=gene-IY40_RS21425;Name=IY40_RS21425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS21425;old_locus_tag=IY40_21785 NZ_JPQY01000039.1 Protein Homology CDS 104196 105629 . + 0 ID=cds-WP_043143179.1;Parent=gene-IY40_RS21425;Dbxref=GenBank:WP_043143179.1;Name=WP_043143179.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004940853.1;locus_tag=IY40_RS21425;product=MFS transporter;protein_id=WP_043143179.1;transl_table=11 NZ_JPQY01000039.1 RefSeq gene 105647 106864 . + . ID=gene-IY40_RS21430;Name=IY40_RS21430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS21430;old_locus_tag=IY40_21790 NZ_JPQY01000039.1 Protein Homology CDS 105647 106864 . + 0 ID=cds-WP_043143180.1;Parent=gene-IY40_RS21430;Dbxref=GenBank:WP_043143180.1;Name=WP_043143180.1;Ontology_term=GO:0016627;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016927113.1;locus_tag=IY40_RS21430;product=acyl-CoA dehydrogenase family protein;protein_id=WP_043143180.1;transl_table=11 NZ_JPQY01000039.1 RefSeq gene 106873 107508 . - . ID=gene-IY40_RS21435;Name=IY40_RS21435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS21435;old_locus_tag=IY40_21795 NZ_JPQY01000039.1 Protein Homology CDS 106873 107508 . - 0 ID=cds-WP_043143181.1;Parent=gene-IY40_RS21435;Dbxref=GenBank:WP_043143181.1;Name=WP_043143181.1;Ontology_term=GO:0009055,GO:0010181;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004940857.1;locus_tag=IY40_RS21435;product=flavodoxin family protein;protein_id=WP_043143181.1;transl_table=11 NZ_JPQY01000039.1 RefSeq gene 107624 108520 . + . ID=gene-IY40_RS21440;Name=IY40_RS21440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS21440;old_locus_tag=IY40_21800 NZ_JPQY01000039.1 Protein Homology CDS 107624 108520 . + 0 ID=cds-WP_043143182.1;Parent=gene-IY40_RS21440;Dbxref=GenBank:WP_043143182.1;Name=WP_043143182.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004940858.1;locus_tag=IY40_RS21440;product=LysR substrate-binding domain-containing protein;protein_id=WP_043143182.1;transl_table=11 NZ_JPQY01000039.1 RefSeq gene 108590 109177 . + . ID=gene-IY40_RS21445;Name=IY40_RS21445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS21445;old_locus_tag=IY40_21805 NZ_JPQY01000039.1 Protein Homology CDS 108590 109177 . + 0 ID=cds-WP_043143183.1;Parent=gene-IY40_RS21445;Dbxref=GenBank:WP_043143183.1;Name=WP_043143183.1;Ontology_term=GO:0000166,GO:0016491;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004940860.1;locus_tag=IY40_RS21445;product=nitroreductase family protein;protein_id=WP_043143183.1;transl_table=11 NZ_JPQY01000039.1 RefSeq gene 109309 109602 . + . ID=gene-IY40_RS21450;Name=IY40_RS21450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS21450;old_locus_tag=IY40_21810 NZ_JPQY01000039.1 Protein Homology CDS 109309 109602 . + 0 ID=cds-WP_043143184.1;Parent=gene-IY40_RS21450;Dbxref=GenBank:WP_043143184.1;Name=WP_043143184.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016927116.1;locus_tag=IY40_RS21450;product=DUF2623 family protein;protein_id=WP_043143184.1;transl_table=11 NZ_JPQY01000039.1 RefSeq gene 109616 110185 . - . ID=gene-IY40_RS21455;Name=IY40_RS21455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS21455;old_locus_tag=IY40_21815 NZ_JPQY01000039.1 Protein Homology CDS 109616 110185 . - 0 ID=cds-WP_015378410.1;Parent=gene-IY40_RS21455;Dbxref=GenBank:WP_015378410.1;Name=WP_015378410.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019452492.1;locus_tag=IY40_RS21455;product=helix-turn-helix domain-containing protein;protein_id=WP_015378410.1;transl_table=11 NZ_JPQY01000039.1 RefSeq gene 110224 110742 . + . ID=gene-IY40_RS21460;Name=IY40_RS21460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS21460;old_locus_tag=IY40_21820 NZ_JPQY01000039.1 Protein Homology CDS 110224 110742 . + 0 ID=cds-WP_043143185.1;Parent=gene-IY40_RS21460;Dbxref=GenBank:WP_043143185.1;Name=WP_043143185.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015378409.1;locus_tag=IY40_RS21460;product=GNAT family N-acetyltransferase;protein_id=WP_043143185.1;transl_table=11 NZ_JPQY01000039.1 RefSeq gene 110760 111200 . + . ID=gene-IY40_RS21465;Name=IY40_RS21465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS21465;old_locus_tag=IY40_21825 NZ_JPQY01000039.1 Protein Homology CDS 110760 111200 . + 0 ID=cds-WP_043143187.1;Parent=gene-IY40_RS21465;Dbxref=GenBank:WP_043143187.1;Name=WP_043143187.1;Ontology_term=GO:0055085,GO:0005215,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transporter activity|0005215||IEA,transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004940869.1;locus_tag=IY40_RS21465;product=DMT family transporter;protein_id=WP_043143187.1;transl_table=11 NZ_JPQY01000039.1 RefSeq gene 111588 112432 . + . ID=gene-IY40_RS25515;Name=IY40_RS25515;end_range=112432,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS25515;partial=true NZ_JPQY01000039.1 Protein Homology CDS 111588 112432 . + 0 ID=cds-WP_080287150.1;Parent=gene-IY40_RS25515;Dbxref=GenBank:WP_080287150.1;Name=WP_080287150.1;Ontology_term=GO:0005524,GO:0016887;end_range=112432,.;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: protein motif:HMM:NF024700.6;locus_tag=IY40_RS25515;partial=true;product=AAA family ATPase;protein_id=WP_080287150.1;transl_table=11 ##sequence-region NZ_JPQY01000040.1 1 113023 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=615 NZ_JPQY01000040.1 RefSeq region 1 113023 . + . ID=NZ_JPQY01000040.1:1..113023;Dbxref=taxon:615;collected-by=Mahloro H. Serepa%3B Vincent M. Gray;collection-date=2013-04-11;country=South Africa: North West Province;gbkey=Src;genome=genomic;identified-by=Mahloro H. Serepa%3B Vincent M. Gray;isolation-source=entomopathogenic nematode Oscheius sp. MCB living in soil;mol_type=genomic DNA;nat-host=Oscheius sp. MCB;strain=MCB NZ_JPQY01000040.1 RefSeq pseudogene 1 608 . - . ID=gene-IY40_RS21470;Name=IY40_RS21470;end_range=608,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IY40_RS21470;partial=true;pseudo=true;start_range=.,1 NZ_JPQY01000040.1 Protein Homology CDS 1 608 . - 0 ID=cds-IY40_RS21470;Parent=gene-IY40_RS21470;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=608,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016927809.1;locus_tag=IY40_RS21470;partial=true;product=RHS domain-containing protein;pseudo=true;start_range=.,1;transl_table=11 NZ_JPQY01000040.1 RefSeq gene 670 1113 . - . ID=gene-IY40_RS25520;Name=IY40_RS25520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS25520 NZ_JPQY01000040.1 Protein Homology CDS 670 1113 . - 0 ID=cds-WP_072008276.1;Parent=gene-IY40_RS25520;Dbxref=GenBank:WP_072008276.1;Name=WP_072008276.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016927801.1;locus_tag=IY40_RS25520;product=DUF6386 family protein;protein_id=WP_072008276.1;transl_table=11 NZ_JPQY01000040.1 RefSeq pseudogene 1217 1348 . - . ID=gene-IY40_RS26720;Name=IY40_RS26720;end_range=1348,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IY40_RS26720;partial=true;pseudo=true;start_range=.,1217 NZ_JPQY01000040.1 Protein Homology CDS 1217 1348 . - 0 ID=cds-IY40_RS26720;Parent=gene-IY40_RS26720;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=1348,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012667205.1;locus_tag=IY40_RS26720;partial=true;product=RHS repeat-associated core domain-containing protein;pseudo=true;start_range=.,1217;transl_table=11 NZ_JPQY01000040.1 RefSeq gene 1388 1876 . - . ID=gene-IY40_RS21480;Name=IY40_RS21480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS21480;old_locus_tag=IY40_21840 NZ_JPQY01000040.1 Protein Homology CDS 1388 1876 . - 0 ID=cds-WP_043143205.1;Parent=gene-IY40_RS21480;Dbxref=GenBank:WP_043143205.1;Name=WP_043143205.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011144725.1;locus_tag=IY40_RS21480;product=hypothetical protein;protein_id=WP_043143205.1;transl_table=11 NZ_JPQY01000040.1 RefSeq pseudogene 2299 2757 . - . ID=gene-IY40_RS21485;Name=IY40_RS21485;end_range=2757,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IY40_RS21485;partial=true;pseudo=true;start_range=.,2299 NZ_JPQY01000040.1 Protein Homology CDS 2299 2757 . - 0 ID=cds-IY40_RS21485;Parent=gene-IY40_RS21485;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=2757,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012667205.1;locus_tag=IY40_RS21485;partial=true;product=RHS repeat-associated core domain-containing protein;pseudo=true;start_range=.,2299;transl_table=11 NZ_JPQY01000040.1 RefSeq gene 2883 3428 . - . ID=gene-IY40_RS24875;Name=IY40_RS24875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS24875 NZ_JPQY01000040.1 Protein Homology CDS 2883 3428 . - 0 ID=cds-WP_050505187.1;Parent=gene-IY40_RS24875;Dbxref=GenBank:WP_050505187.1;Name=WP_050505187.1;Ontology_term=GO:0042546;gbkey=CDS;go_process=cell wall biogenesis|0042546||IEA;inference=COORDINATES: protein motif:HMM:NF020904.6;locus_tag=IY40_RS24875;product=SMI1/KNR4 family protein;protein_id=WP_050505187.1;transl_table=11 NZ_JPQY01000040.1 RefSeq gene 3422 7684 . - . ID=gene-IY40_RS21495;Name=IY40_RS21495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS21495 NZ_JPQY01000040.1 Protein Homology CDS 3422 7684 . - 0 ID=cds-WP_235211385.1;Parent=gene-IY40_RS21495;Dbxref=GenBank:WP_235211385.1;Name=WP_235211385.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004158999.1;locus_tag=IY40_RS21495;product=RHS repeat-associated core domain-containing protein;protein_id=WP_235211385.1;transl_table=11 NZ_JPQY01000040.1 RefSeq gene 7716 8147 . - . ID=gene-IY40_RS21500;Name=IY40_RS21500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS21500;old_locus_tag=IY40_21865 NZ_JPQY01000040.1 Protein Homology CDS 7716 8147 . - 0 ID=cds-WP_043143207.1;Parent=gene-IY40_RS21500;Dbxref=GenBank:WP_043143207.1;Name=WP_043143207.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004940742.1;locus_tag=IY40_RS21500;product=DcrB-related protein;protein_id=WP_043143207.1;transl_table=11 NZ_JPQY01000040.1 RefSeq gene 8381 9385 . + . ID=gene-IY40_RS21505;Name=IY40_RS21505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS21505;old_locus_tag=IY40_21875 NZ_JPQY01000040.1 Protein Homology CDS 8381 9385 . + 0 ID=cds-WP_043143208.1;Parent=gene-IY40_RS21505;Dbxref=GenBank:WP_043143208.1;Name=WP_043143208.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016927811.1;locus_tag=IY40_RS21505;product=alpha/beta fold hydrolase;protein_id=WP_043143208.1;transl_table=11 NZ_JPQY01000040.1 RefSeq gene 9455 10105 . + . ID=gene-IY40_RS21510;Name=IY40_RS21510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS21510;old_locus_tag=IY40_21880 NZ_JPQY01000040.1 Protein Homology CDS 9455 10105 . + 0 ID=cds-WP_043143210.1;Parent=gene-IY40_RS21510;Dbxref=GenBank:WP_043143210.1;Name=WP_043143210.1;Ontology_term=GO:0046654,GO:0004146,GO:0050661;gbkey=CDS;go_function=dihydrofolate reductase activity|0004146||IEA,NADP binding|0050661||IEA;go_process=tetrahydrofolate biosynthetic process|0046654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015377814.1;locus_tag=IY40_RS21510;product=dihydrofolate reductase family protein;protein_id=WP_043143210.1;transl_table=11 NZ_JPQY01000040.1 RefSeq gene 10147 11763 . - . ID=gene-IY40_RS21515;Name=IY40_RS21515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS21515;old_locus_tag=IY40_21885 NZ_JPQY01000040.1 Protein Homology CDS 10147 11763 . - 0 ID=cds-WP_043143212.1;Parent=gene-IY40_RS21515;Dbxref=GenBank:WP_043143212.1;Name=WP_043143212.1;Ontology_term=GO:0006508,GO:0004222,GO:0046872,GO:0005615;gbkey=CDS;go_component=extracellular space|0005615||IEA;go_function=metalloendopeptidase activity|0004222||IEA,metal ion binding|0046872||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015377813.1;locus_tag=IY40_RS21515;product=serralysin family metalloprotease;protein_id=WP_043143212.1;transl_table=11 NZ_JPQY01000040.1 RefSeq gene 12175 12528 . + . ID=gene-IY40_RS21520;Name=IY40_RS21520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS21520;old_locus_tag=IY40_21890 NZ_JPQY01000040.1 Protein Homology CDS 12175 12528 . + 0 ID=cds-WP_043143214.1;Parent=gene-IY40_RS21520;Dbxref=GenBank:WP_043143214.1;Name=WP_043143214.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004940750.1;locus_tag=IY40_RS21520;product=protease inhibitor Inh/omp19 family protein;protein_id=WP_043143214.1;transl_table=11 NZ_JPQY01000040.1 RefSeq gene 12533 13054 . - . ID=gene-IY40_RS21525;Name=IY40_RS21525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS21525;old_locus_tag=IY40_21895 NZ_JPQY01000040.1 Protein Homology CDS 12533 13054 . - 0 ID=cds-WP_028127817.1;Parent=gene-IY40_RS21525;Dbxref=GenBank:WP_028127817.1;Name=WP_028127817.1;Ontology_term=GO:0015703,GO:0015109;gbkey=CDS;go_function=chromate transmembrane transporter activity|0015109||IEA;go_process=chromate transport|0015703||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006325093.1;locus_tag=IY40_RS21525;product=chromate transporter;protein_id=WP_028127817.1;transl_table=11 NZ_JPQY01000040.1 RefSeq gene 13051 13617 . - . ID=gene-IY40_RS21530;Name=IY40_RS21530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS21530;old_locus_tag=IY40_21900 NZ_JPQY01000040.1 Protein Homology CDS 13051 13617 . - 0 ID=cds-WP_043143217.1;Parent=gene-IY40_RS21530;Dbxref=GenBank:WP_043143217.1;Name=WP_043143217.1;Ontology_term=GO:0015703,GO:0015109;gbkey=CDS;go_function=chromate transmembrane transporter activity|0015109||IEA;go_process=chromate transport|0015703||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016927816.1;locus_tag=IY40_RS21530;product=chromate transporter;protein_id=WP_043143217.1;transl_table=11 NZ_JPQY01000040.1 RefSeq gene 13721 14635 . + . ID=gene-IY40_RS21535;Name=IY40_RS21535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS21535;old_locus_tag=IY40_21905 NZ_JPQY01000040.1 Protein Homology CDS 13721 14635 . + 0 ID=cds-WP_043143219.1;Parent=gene-IY40_RS21535;Dbxref=GenBank:WP_043143219.1;Name=WP_043143219.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019456336.1;locus_tag=IY40_RS21535;product=LysR family transcriptional regulator;protein_id=WP_043143219.1;transl_table=11 NZ_JPQY01000040.1 RefSeq gene 14620 15462 . - . ID=gene-IY40_RS21540;Name=licT;gbkey=Gene;gene=licT;gene_biotype=protein_coding;locus_tag=IY40_RS21540;old_locus_tag=IY40_21910 NZ_JPQY01000040.1 Protein Homology CDS 14620 15462 . - 0 ID=cds-WP_043143221.1;Parent=gene-IY40_RS21540;Dbxref=GenBank:WP_043143221.1;Name=WP_043143221.1;Ontology_term=GO:0006355,GO:0003723;gbkey=CDS;gene=licT;go_function=RNA binding|0003723||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016927818.1;locus_tag=IY40_RS21540;product=BglG family transcription antiterminator LicT;protein_id=WP_043143221.1;transl_table=11 NZ_JPQY01000040.1 RefSeq gene 15483 16898 . - . ID=gene-IY40_RS21545;Name=IY40_RS21545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS21545;old_locus_tag=IY40_21915 NZ_JPQY01000040.1 Protein Homology CDS 15483 16898 . - 0 ID=cds-WP_043143223.1;Parent=gene-IY40_RS21545;Dbxref=GenBank:WP_043143223.1;Name=WP_043143223.1;Ontology_term=GO:0005975,GO:0016798;gbkey=CDS;go_function=hydrolase activity%2C acting on glycosyl bonds|0016798||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016927819.1;locus_tag=IY40_RS21545;product=glycoside hydrolase family 1 protein;protein_id=WP_043143223.1;transl_table=11 NZ_JPQY01000040.1 RefSeq gene 16895 18748 . - . ID=gene-IY40_RS21550;Name=IY40_RS21550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS21550;old_locus_tag=IY40_21920 NZ_JPQY01000040.1 Protein Homology CDS 16895 18748 . - 0 ID=cds-WP_043143225.1;Parent=gene-IY40_RS21550;Dbxref=GenBank:WP_043143225.1;Name=WP_043143225.1;Ontology_term=GO:0009401,GO:0015759,GO:0008982,GO:0015573,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA,beta-glucoside transmembrane transporter activity|0015573||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,beta-glucoside transport|0015759||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006325088.1;locus_tag=IY40_RS21550;product=beta-glucoside-specific PTS transporter subunit IIABC;protein_id=WP_043143225.1;transl_table=11 NZ_JPQY01000040.1 RefSeq gene 19310 20479 . + . ID=gene-IY40_RS21555;Name=IY40_RS21555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS21555;old_locus_tag=IY40_21925 NZ_JPQY01000040.1 Protein Homology CDS 19310 20479 . + 0 ID=cds-WP_043143227.1;Parent=gene-IY40_RS21555;Dbxref=GenBank:WP_043143227.1;Name=WP_043143227.1;Ontology_term=GO:0045735;gbkey=CDS;go_function=nutrient reservoir activity|0045735||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004940757.1;locus_tag=IY40_RS21555;product=cupin domain-containing protein;protein_id=WP_043143227.1;transl_table=11 NZ_JPQY01000040.1 RefSeq gene 20516 21820 . - . ID=gene-IY40_RS21560;Name=IY40_RS21560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS21560;old_locus_tag=IY40_21930 NZ_JPQY01000040.1 Protein Homology CDS 20516 21820 . - 0 ID=cds-WP_043143228.1;Parent=gene-IY40_RS21560;Dbxref=GenBank:WP_043143228.1;Name=WP_043143228.1;Ontology_term=GO:0009055,GO:0020037;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019456350.1;locus_tag=IY40_RS21560;product=c-type cytochrome;protein_id=WP_043143228.1;transl_table=11 NZ_JPQY01000040.1 RefSeq gene 21832 22290 . - . ID=gene-IY40_RS21565;Name=IY40_RS21565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS21565;old_locus_tag=IY40_21935 NZ_JPQY01000040.1 Protein Homology CDS 21832 22290 . - 0 ID=cds-WP_043143229.1;Parent=gene-IY40_RS21565;Dbxref=GenBank:WP_043143229.1;Name=WP_043143229.1;Ontology_term=GO:0046872,GO:0051536,GO:0051537;gbkey=CDS;go_function=metal ion binding|0046872||IEA,iron-sulfur cluster binding|0051536||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015377806.1;locus_tag=IY40_RS21565;product=(2Fe-2S)-binding protein;protein_id=WP_043143229.1;transl_table=11 NZ_JPQY01000040.1 RefSeq gene 22290 24512 . - . ID=gene-IY40_RS21570;Name=IY40_RS21570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS21570;old_locus_tag=IY40_21940 NZ_JPQY01000040.1 Protein Homology CDS 22290 24512 . - 0 ID=cds-WP_025302751.1;Parent=gene-IY40_RS21570;Dbxref=GenBank:WP_025302751.1;Name=WP_025302751.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016927824.1;locus_tag=IY40_RS21570;product=xanthine dehydrogenase family protein molybdopterin-binding subunit;protein_id=WP_025302751.1;transl_table=11 NZ_JPQY01000040.1 RefSeq gene 24713 25537 . - . ID=gene-IY40_RS21575;Name=IY40_RS21575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS21575;old_locus_tag=IY40_21945 NZ_JPQY01000040.1 Protein Homology CDS 24713 25537 . - 0 ID=cds-WP_043143230.1;Parent=gene-IY40_RS21575;Dbxref=GenBank:WP_043143230.1;Name=WP_043143230.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012882885.1;locus_tag=IY40_RS21575;product=M55 family metallopeptidase;protein_id=WP_043143230.1;transl_table=11 NZ_JPQY01000040.1 RefSeq gene 25539 26612 . - . ID=gene-IY40_RS21580;Name=IY40_RS21580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS21580;old_locus_tag=IY40_21950 NZ_JPQY01000040.1 Protein Homology CDS 25539 26612 . - 0 ID=cds-WP_043143231.1;Parent=gene-IY40_RS21580;Dbxref=GenBank:WP_043143231.1;Name=WP_043143231.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019456355.1;locus_tag=IY40_RS21580;product=P1 family peptidase;protein_id=WP_043143231.1;transl_table=11 NZ_JPQY01000040.1 RefSeq pseudogene 26722 26921 . + . ID=gene-IY40_RS26530;Name=IY40_RS26530;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IY40_RS26530;partial=true;pseudo=true;start_range=.,26722 NZ_JPQY01000040.1 Protein Homology CDS 26722 26921 . + 0 ID=cds-IY40_RS26530;Parent=gene-IY40_RS26530;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006325086.1;locus_tag=IY40_RS26530;partial=true;product=FAD-dependent urate hydroxylase HpxO;pseudo=true;start_range=.,26722;transl_table=11 NZ_JPQY01000040.1 RefSeq gene 26991 27257 . - . ID=gene-IY40_RS21585;Name=IY40_RS21585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS21585;old_locus_tag=IY40_21955 NZ_JPQY01000040.1 Protein Homology CDS 26991 27257 . - 0 ID=cds-WP_043143311.1;Parent=gene-IY40_RS21585;Dbxref=GenBank:WP_043143311.1;Name=WP_043143311.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019454345.1;locus_tag=IY40_RS21585;product=hypothetical protein;protein_id=WP_043143311.1;transl_table=11 NZ_JPQY01000040.1 RefSeq gene 27549 28292 . - . ID=gene-IY40_RS21590;Name=IY40_RS21590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS21590;old_locus_tag=IY40_21960 NZ_JPQY01000040.1 Protein Homology CDS 27549 28292 . - 0 ID=cds-WP_050505188.1;Parent=gene-IY40_RS21590;Dbxref=GenBank:WP_050505188.1;Name=WP_050505188.1;Ontology_term=GO:0006810,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015377799.1;locus_tag=IY40_RS21590;product=sulfite exporter TauE/SafE family protein;protein_id=WP_050505188.1;transl_table=11 NZ_JPQY01000040.1 RefSeq gene 28400 29281 . + . ID=gene-IY40_RS21595;Name=IY40_RS21595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS21595;old_locus_tag=IY40_21965 NZ_JPQY01000040.1 Protein Homology CDS 28400 29281 . + 0 ID=cds-WP_043143233.1;Parent=gene-IY40_RS21595;Dbxref=GenBank:WP_043143233.1;Name=WP_043143233.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004940783.1;locus_tag=IY40_RS21595;product=LysR family transcriptional regulator;protein_id=WP_043143233.1;transl_table=11 NZ_JPQY01000040.1 RefSeq gene 29288 32857 . - . ID=gene-IY40_RS21600;Name=IY40_RS21600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS21600;old_locus_tag=IY40_21970 NZ_JPQY01000040.1 Protein Homology CDS 29288 32857 . - 0 ID=cds-WP_043143234.1;Parent=gene-IY40_RS21600;Dbxref=GenBank:WP_043143234.1;Name=WP_043143234.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004940785.1;locus_tag=IY40_RS21600;product=molybdopterin cofactor-binding domain-containing protein;protein_id=WP_043143234.1;transl_table=11 NZ_JPQY01000040.1 RefSeq gene 32850 33392 . - . ID=gene-IY40_RS21605;Name=IY40_RS21605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS21605;old_locus_tag=IY40_21975 NZ_JPQY01000040.1 Protein Homology CDS 32850 33392 . - 0 ID=cds-WP_025302744.1;Parent=gene-IY40_RS21605;Dbxref=GenBank:WP_025302744.1;Name=WP_025302744.1;Ontology_term=GO:0046872,GO:0051536,GO:0051537;gbkey=CDS;go_function=metal ion binding|0046872||IEA,iron-sulfur cluster binding|0051536||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004938615.1;locus_tag=IY40_RS21605;product=(2Fe-2S)-binding protein;protein_id=WP_025302744.1;transl_table=11 NZ_JPQY01000040.1 RefSeq gene 33478 33951 . - . ID=gene-IY40_RS21610;Name=IY40_RS21610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS21610;old_locus_tag=IY40_21980 NZ_JPQY01000040.1 Protein Homology CDS 33478 33951 . - 0 ID=cds-WP_043143235.1;Parent=gene-IY40_RS21610;Dbxref=GenBank:WP_043143235.1;Name=WP_043143235.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004944104.1;locus_tag=IY40_RS21610;product=MarR family winged helix-turn-helix transcriptional regulator;protein_id=WP_043143235.1;transl_table=11 NZ_JPQY01000040.1 RefSeq gene 34018 35076 . - . ID=gene-IY40_RS21615;Name=IY40_RS21615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS21615;old_locus_tag=IY40_21985 NZ_JPQY01000040.1 Protein Homology CDS 34018 35076 . - 0 ID=cds-WP_043143236.1;Parent=gene-IY40_RS21615;Dbxref=GenBank:WP_043143236.1;Name=WP_043143236.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004938611.1;locus_tag=IY40_RS21615;product=2%2C5-dihydroxypyridine 5%2C6-dioxygenase;protein_id=WP_043143236.1;transl_table=11 NZ_JPQY01000040.1 RefSeq gene 35403 36554 . + . ID=gene-IY40_RS21620;Name=IY40_RS21620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS21620;old_locus_tag=IY40_21990 NZ_JPQY01000040.1 Protein Homology CDS 35403 36554 . + 0 ID=cds-WP_033645813.1;Parent=gene-IY40_RS21620;Dbxref=GenBank:WP_033645813.1;Name=WP_033645813.1;Ontology_term=GO:0071949;gbkey=CDS;go_function=FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004944098.1;locus_tag=IY40_RS21620;product=FAD-dependent monooxygenase;protein_id=WP_033645813.1;transl_table=11 NZ_JPQY01000040.1 RefSeq gene 36551 37345 . + . ID=gene-IY40_RS21625;Name=IY40_RS21625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS21625;old_locus_tag=IY40_21995 NZ_JPQY01000040.1 Protein Homology CDS 36551 37345 . + 0 ID=cds-WP_025302741.1;Parent=gene-IY40_RS21625;Dbxref=GenBank:WP_025302741.1;Name=WP_025302741.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004944096.1;locus_tag=IY40_RS21625;product=alpha/beta fold hydrolase;protein_id=WP_025302741.1;transl_table=11 NZ_JPQY01000040.1 RefSeq gene 37361 38113 . + . ID=gene-IY40_RS21630;Name=IY40_RS21630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS21630;old_locus_tag=IY40_22000 NZ_JPQY01000040.1 Protein Homology CDS 37361 38113 . + 0 ID=cds-WP_016927838.1;Parent=gene-IY40_RS21630;Dbxref=GenBank:WP_016927838.1;Name=WP_016927838.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004938600.1;locus_tag=IY40_RS21630;product=maleate cis-trans isomerase family protein;protein_id=WP_016927838.1;transl_table=11 NZ_JPQY01000040.1 RefSeq gene 38123 38752 . + . ID=gene-IY40_RS21635;Name=IY40_RS21635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS21635;old_locus_tag=IY40_22005 NZ_JPQY01000040.1 Protein Homology CDS 38123 38752 . + 0 ID=cds-WP_025302739.1;Parent=gene-IY40_RS21635;Dbxref=GenBank:WP_025302739.1;Name=WP_025302739.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004938597.1;locus_tag=IY40_RS21635;product=N-carbamoylsarcosine amidohydrolase;protein_id=WP_025302739.1;transl_table=11 NZ_JPQY01000040.1 RefSeq gene 38895 40205 . + . ID=gene-IY40_RS21640;Name=IY40_RS21640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS21640;old_locus_tag=IY40_22010 NZ_JPQY01000040.1 Protein Homology CDS 38895 40205 . + 0 ID=cds-WP_016927840.1;Parent=gene-IY40_RS21640;Dbxref=GenBank:WP_016927840.1;Name=WP_016927840.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017892744.1;locus_tag=IY40_RS21640;product=MFS transporter;protein_id=WP_016927840.1;transl_table=11 NZ_JPQY01000040.1 RefSeq gene 40242 40865 . - . ID=gene-IY40_RS21645;Name=IY40_RS21645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS21645;old_locus_tag=IY40_22015 NZ_JPQY01000040.1 GeneMarkS-2+ CDS 40242 40865 . - 0 ID=cds-WP_043143238.1;Parent=gene-IY40_RS21645;Dbxref=GenBank:WP_043143238.1;Name=WP_043143238.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IY40_RS21645;product=hypothetical protein;protein_id=WP_043143238.1;transl_table=11 NZ_JPQY01000040.1 RefSeq gene 40955 43156 . - . ID=gene-IY40_RS21650;Name=dcp;gbkey=Gene;gene=dcp;gene_biotype=protein_coding;locus_tag=IY40_RS21650;old_locus_tag=IY40_22020 NZ_JPQY01000040.1 Protein Homology CDS 40955 43156 . - 0 ID=cds-WP_043143240.1;Parent=gene-IY40_RS21650;Dbxref=GenBank:WP_043143240.1;Name=WP_043143240.1;Ontology_term=GO:0006508,GO:0008237;gbkey=CDS;gene=dcp;go_function=metallopeptidase activity|0008237||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004938592.1;locus_tag=IY40_RS21650;product=peptidyl-dipeptidase Dcp;protein_id=WP_043143240.1;transl_table=11 NZ_JPQY01000040.1 RefSeq gene 43457 43747 . + . ID=gene-IY40_RS21655;Name=IY40_RS21655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS21655;old_locus_tag=IY40_22025 NZ_JPQY01000040.1 GeneMarkS-2+ CDS 43457 43747 . + 0 ID=cds-WP_025302735.1;Parent=gene-IY40_RS21655;Dbxref=GenBank:WP_025302735.1;Name=WP_025302735.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IY40_RS21655;product=hypothetical protein;protein_id=WP_025302735.1;transl_table=11 NZ_JPQY01000040.1 RefSeq gene 43744 44031 . + . ID=gene-IY40_RS26725;Name=IY40_RS26725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS26725 NZ_JPQY01000040.1 Protein Homology CDS 43744 44031 . + 0 ID=cds-WP_125460888.1;Parent=gene-IY40_RS26725;Dbxref=GenBank:WP_125460888.1;Name=WP_125460888.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF051486.1;locus_tag=IY40_RS26725;product=E492 group microcin;protein_id=WP_125460888.1;transl_table=11 NZ_JPQY01000040.1 RefSeq gene 44109 45635 . + . ID=gene-IY40_RS24880;Name=IY40_RS24880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS24880 NZ_JPQY01000040.1 GeneMarkS-2+ CDS 44109 45635 . + 0 ID=cds-WP_050505189.1;Parent=gene-IY40_RS24880;Dbxref=GenBank:WP_050505189.1;Name=WP_050505189.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IY40_RS24880;product=hypothetical protein;protein_id=WP_050505189.1;transl_table=11 NZ_JPQY01000040.1 RefSeq gene 45654 46103 . + . ID=gene-IY40_RS21665;Name=IY40_RS21665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS21665;old_locus_tag=IY40_22035 NZ_JPQY01000040.1 Protein Homology CDS 45654 46103 . + 0 ID=cds-WP_043143242.1;Parent=gene-IY40_RS21665;Dbxref=GenBank:WP_043143242.1;Name=WP_043143242.1;Ontology_term=GO:0009404,GO:0016746,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=acyltransferase activity|0016746||IEA;go_process=toxin metabolic process|0009404||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016927844.1;locus_tag=IY40_RS21665;product=toxin-activating lysine-acyltransferase;protein_id=WP_043143242.1;transl_table=11 NZ_JPQY01000040.1 RefSeq gene 46121 49927 . + . ID=gene-IY40_RS21670;Name=IY40_RS21670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS21670;old_locus_tag=IY40_22040 NZ_JPQY01000040.1 Protein Homology CDS 46121 49927 . + 0 ID=cds-WP_043143244.1;Parent=gene-IY40_RS21670;Dbxref=GenBank:WP_043143244.1;Name=WP_043143244.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012873.6;locus_tag=IY40_RS21670;product=AMP-binding protein;protein_id=WP_043143244.1;transl_table=11 NZ_JPQY01000040.1 RefSeq gene 49927 54072 . + . ID=gene-IY40_RS21675;Name=IY40_RS21675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS21675;old_locus_tag=IY40_22045 NZ_JPQY01000040.1 Protein Homology CDS 49927 54072 . + 0 ID=cds-WP_043143246.1;Parent=gene-IY40_RS21675;Dbxref=GenBank:WP_043143246.1;Name=WP_043143246.1;Ontology_term=GO:0019184,GO:0044550,GO:0016874,GO:0031177;gbkey=CDS;go_function=ligase activity|0016874||IEA,phosphopantetheine binding|0031177||IEA;go_process=nonribosomal peptide biosynthetic process|0019184||IEA,secondary metabolite biosynthetic process|0044550||IEA;inference=COORDINATES: protein motif:HMM:NF012873.6;locus_tag=IY40_RS21675;product=non-ribosomal peptide synthetase;protein_id=WP_043143246.1;transl_table=11 NZ_JPQY01000040.1 RefSeq gene 54317 54577 . + . ID=gene-IY40_RS21680;Name=IY40_RS21680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS21680 NZ_JPQY01000040.1 GeneMarkS-2+ CDS 54317 54577 . + 0 ID=cds-WP_016927848.1;Parent=gene-IY40_RS21680;Dbxref=GenBank:WP_016927848.1;Name=WP_016927848.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IY40_RS21680;product=hypothetical protein;protein_id=WP_016927848.1;transl_table=11 NZ_JPQY01000040.1 RefSeq gene 54602 54769 . + . ID=gene-IY40_RS26255;Name=IY40_RS26255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS26255 NZ_JPQY01000040.1 GeneMarkS-2+ CDS 54602 54769 . + 0 ID=cds-WP_016927849.1;Parent=gene-IY40_RS26255;Dbxref=GenBank:WP_016927849.1;Name=WP_016927849.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IY40_RS26255;product=hypothetical protein;protein_id=WP_016927849.1;transl_table=11 NZ_JPQY01000040.1 RefSeq gene 54875 55099 . + . ID=gene-IY40_RS21685;Name=IY40_RS21685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS21685;old_locus_tag=IY40_22065 NZ_JPQY01000040.1 GeneMarkS-2+ CDS 54875 55099 . + 0 ID=cds-WP_154892309.1;Parent=gene-IY40_RS21685;Dbxref=GenBank:WP_154892309.1;Name=WP_154892309.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IY40_RS21685;product=hypothetical protein;protein_id=WP_154892309.1;transl_table=11 NZ_JPQY01000040.1 RefSeq gene 55286 57385 . - . ID=gene-IY40_RS21690;Name=IY40_RS21690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS21690;old_locus_tag=IY40_22070 NZ_JPQY01000040.1 Protein Homology CDS 55286 57385 . - 0 ID=cds-WP_016927850.1;Parent=gene-IY40_RS21690;Dbxref=GenBank:WP_016927850.1;Name=WP_016927850.1;Ontology_term=GO:0005524,GO:0008233,GO:0016887,GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,peptidase activity|0008233||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016927850.1;locus_tag=IY40_RS21690;product=peptidase domain-containing ABC transporter;protein_id=WP_016927850.1;transl_table=11 NZ_JPQY01000040.1 RefSeq gene 57378 58664 . - . ID=gene-IY40_RS21695;Name=IY40_RS21695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS21695;old_locus_tag=IY40_22075 NZ_JPQY01000040.1 Protein Homology CDS 57378 58664 . - 0 ID=cds-WP_043143248.1;Parent=gene-IY40_RS21695;Dbxref=GenBank:WP_043143248.1;Name=WP_043143248.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016927851.1;locus_tag=IY40_RS21695;product=HlyD family secretion protein;protein_id=WP_043143248.1;transl_table=11 NZ_JPQY01000040.1 RefSeq gene 59102 60016 . - . ID=gene-IY40_RS21700;Name=IY40_RS21700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS21700;old_locus_tag=IY40_22080 NZ_JPQY01000040.1 Protein Homology CDS 59102 60016 . - 0 ID=cds-WP_025302729.1;Parent=gene-IY40_RS21700;Dbxref=GenBank:WP_025302729.1;Name=WP_025302729.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016927852.1;locus_tag=IY40_RS21700;product=LysR family transcriptional regulator;protein_id=WP_025302729.1;transl_table=11 NZ_JPQY01000040.1 RefSeq gene 60120 61286 . + . ID=gene-IY40_RS21705;Name=IY40_RS21705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS21705;old_locus_tag=IY40_22085 NZ_JPQY01000040.1 Protein Homology CDS 60120 61286 . + 0 ID=cds-WP_043143316.1;Parent=gene-IY40_RS21705;Dbxref=GenBank:WP_043143316.1;Name=WP_043143316.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016927853.1;locus_tag=IY40_RS21705;product=MFS transporter;protein_id=WP_043143316.1;transl_table=11 NZ_JPQY01000040.1 RefSeq gene 61268 62584 . - . ID=gene-IY40_RS21710;Name=guaD;gbkey=Gene;gene=guaD;gene_biotype=protein_coding;locus_tag=IY40_RS21710;old_locus_tag=IY40_22090 NZ_JPQY01000040.1 Protein Homology CDS 61268 62584 . - 0 ID=cds-WP_043143250.1;Parent=gene-IY40_RS21710;Dbxref=GenBank:WP_043143250.1;Name=WP_043143250.1;Ontology_term=GO:0006147,GO:0008270,GO:0008892;gbkey=CDS;gene=guaD;go_function=zinc ion binding|0008270||IEA,guanine deaminase activity|0008892||IEA;go_process=guanine catabolic process|0006147||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019456362.1;locus_tag=IY40_RS21710;product=guanine deaminase;protein_id=WP_043143250.1;transl_table=11 NZ_JPQY01000040.1 RefSeq gene 62772 62954 . + . ID=gene-IY40_RS26055;Name=IY40_RS26055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS26055 NZ_JPQY01000040.1 GeneMarkS-2+ CDS 62772 62954 . + 0 ID=cds-WP_127146125.1;Parent=gene-IY40_RS26055;Dbxref=GenBank:WP_127146125.1;Name=WP_127146125.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IY40_RS26055;product=hypothetical protein;protein_id=WP_127146125.1;transl_table=11 NZ_JPQY01000040.1 RefSeq gene 63013 63537 . + . ID=gene-IY40_RS21715;Name=fecI;gbkey=Gene;gene=fecI;gene_biotype=protein_coding;locus_tag=IY40_RS21715;old_locus_tag=IY40_22095 NZ_JPQY01000040.1 Protein Homology CDS 63013 63537 . + 0 ID=cds-WP_043143252.1;Parent=gene-IY40_RS21715;Dbxref=GenBank:WP_043143252.1;Name=WP_043143252.1;gbkey=CDS;gene=fecI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015377788.1;locus_tag=IY40_RS21715;product=ferric citrate uptake sigma factor FecI;protein_id=WP_043143252.1;transl_table=11 NZ_JPQY01000040.1 RefSeq gene 63534 64490 . + . ID=gene-IY40_RS21720;Name=fecR;gbkey=Gene;gene=fecR;gene_biotype=protein_coding;locus_tag=IY40_RS21720;old_locus_tag=IY40_22100 NZ_JPQY01000040.1 Protein Homology CDS 63534 64490 . + 0 ID=cds-WP_043143254.1;Parent=gene-IY40_RS21720;Dbxref=GenBank:WP_043143254.1;Name=WP_043143254.1;gbkey=CDS;gene=fecR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019456364.1;locus_tag=IY40_RS21720;product=ferric citrate uptake sigma factor regulator FecR;protein_id=WP_043143254.1;transl_table=11 NZ_JPQY01000040.1 RefSeq gene 64606 66957 . + . ID=gene-IY40_RS21725;Name=fecA;gbkey=Gene;gene=fecA;gene_biotype=protein_coding;locus_tag=IY40_RS21725;old_locus_tag=IY40_22105 NZ_JPQY01000040.1 Protein Homology CDS 64606 66957 . + 0 ID=cds-WP_043143256.1;Parent=gene-IY40_RS21725;Dbxref=GenBank:WP_043143256.1;Name=WP_043143256.1;gbkey=CDS;gene=fecA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004938574.1;locus_tag=IY40_RS21725;product=TonB-dependent Fe(3+) dicitrate receptor FecA;protein_id=WP_043143256.1;transl_table=11 NZ_JPQY01000040.1 RefSeq gene 67157 67678 . + . ID=gene-IY40_RS21730;Name=IY40_RS21730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS21730;old_locus_tag=IY40_22110 NZ_JPQY01000040.1 Protein Homology CDS 67157 67678 . + 0 ID=cds-WP_043143257.1;Parent=gene-IY40_RS21730;Dbxref=GenBank:WP_043143257.1;Name=WP_043143257.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004938571.1;locus_tag=IY40_RS21730;product=GNAT family N-acetyltransferase;protein_id=WP_043143257.1;transl_table=11 NZ_JPQY01000040.1 RefSeq gene 67804 68553 . + . ID=gene-IY40_RS21735;Name=ydfG;gbkey=Gene;gene=ydfG;gene_biotype=protein_coding;locus_tag=IY40_RS21735;old_locus_tag=IY40_22115 NZ_JPQY01000040.1 Protein Homology CDS 67804 68553 . + 0 ID=cds-WP_025302722.1;Parent=gene-IY40_RS21735;Dbxref=GenBank:WP_025302722.1;Name=WP_025302722.1;Ontology_term=GO:0016491;gbkey=CDS;gene=ydfG;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004938567.1;locus_tag=IY40_RS21735;product=bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG;protein_id=WP_025302722.1;transl_table=11 NZ_JPQY01000040.1 RefSeq gene 68590 68916 . - . ID=gene-IY40_RS21740;Name=IY40_RS21740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS21740;old_locus_tag=IY40_22120 NZ_JPQY01000040.1 Protein Homology CDS 68590 68916 . - 0 ID=cds-WP_025302721.1;Parent=gene-IY40_RS21740;Dbxref=GenBank:WP_025302721.1;Name=WP_025302721.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012145017.1;locus_tag=IY40_RS21740;product=YnfA family protein;protein_id=WP_025302721.1;transl_table=11 NZ_JPQY01000040.1 RefSeq gene 69065 69433 . + . ID=gene-IY40_RS21745;Name=IY40_RS21745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS21745;old_locus_tag=IY40_22125 NZ_JPQY01000040.1 Protein Homology CDS 69065 69433 . + 0 ID=cds-WP_019455910.1;Parent=gene-IY40_RS21745;Dbxref=GenBank:WP_019455910.1;Name=WP_019455910.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006322586.1;locus_tag=IY40_RS21745;product=DUF1283 family protein;protein_id=WP_019455910.1;transl_table=11 NZ_JPQY01000040.1 RefSeq gene 69523 69822 . + . ID=gene-IY40_RS21750;Name=IY40_RS21750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS21750;old_locus_tag=IY40_22130 NZ_JPQY01000040.1 Protein Homology CDS 69523 69822 . + 0 ID=cds-WP_019455911.1;Parent=gene-IY40_RS21750;Dbxref=GenBank:WP_019455911.1;Name=WP_019455911.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013812766.1;locus_tag=IY40_RS21750;product=DUF1161 domain-containing protein;protein_id=WP_019455911.1;transl_table=11 NZ_JPQY01000040.1 RefSeq gene 69873 71360 . - . ID=gene-IY40_RS21755;Name=IY40_RS21755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS21755;old_locus_tag=IY40_22135 NZ_JPQY01000040.1 Protein Homology CDS 69873 71360 . - 0 ID=cds-WP_043143259.1;Parent=gene-IY40_RS21755;Dbxref=GenBank:WP_043143259.1;Name=WP_043143259.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015377784.1;locus_tag=IY40_RS21755;product=MDR family MFS transporter;protein_id=WP_043143259.1;transl_table=11 NZ_JPQY01000040.1 RefSeq gene 71870 72586 . + . ID=gene-IY40_RS21760;Name=IY40_RS21760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS21760;old_locus_tag=IY40_22140 NZ_JPQY01000040.1 Protein Homology CDS 71870 72586 . + 0 ID=cds-WP_043143261.1;Parent=gene-IY40_RS21760;Dbxref=GenBank:WP_043143261.1;Name=WP_043143261.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019455913.1;locus_tag=IY40_RS21760;product=ABC transporter permease;protein_id=WP_043143261.1;transl_table=11 NZ_JPQY01000040.1 RefSeq gene 72651 73508 . + . ID=gene-IY40_RS21765;Name=IY40_RS21765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS21765;old_locus_tag=IY40_22145 NZ_JPQY01000040.1 Protein Homology CDS 72651 73508 . + 0 ID=cds-WP_173888958.1;Parent=gene-IY40_RS21765;Dbxref=GenBank:WP_173888958.1;Name=WP_173888958.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015672466.1;locus_tag=IY40_RS21765;product=glycine betaine ABC transporter substrate-binding protein;protein_id=WP_173888958.1;transl_table=11 NZ_JPQY01000040.1 RefSeq gene 73517 74167 . + . ID=gene-IY40_RS21770;Name=osmW;gbkey=Gene;gene=osmW;gene_biotype=protein_coding;locus_tag=IY40_RS21770;old_locus_tag=IY40_22150 NZ_JPQY01000040.1 Protein Homology CDS 73517 74167 . + 0 ID=cds-WP_015377782.1;Parent=gene-IY40_RS21770;Dbxref=GenBank:WP_015377782.1;Name=WP_015377782.1;gbkey=CDS;gene=osmW;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004938544.1;locus_tag=IY40_RS21770;product=osmoprotectant ABC transporter permease OsmW;protein_id=WP_015377782.1;transl_table=11 NZ_JPQY01000040.1 RefSeq gene 74164 75303 . + . ID=gene-IY40_RS21775;Name=osmV;gbkey=Gene;gene=osmV;gene_biotype=protein_coding;locus_tag=IY40_RS21775;old_locus_tag=IY40_22155 NZ_JPQY01000040.1 Protein Homology CDS 74164 75303 . + 0 ID=cds-WP_016927861.1;Parent=gene-IY40_RS21775;Dbxref=GenBank:WP_016927861.1;Name=WP_016927861.1;gbkey=CDS;gene=osmV;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016927861.1;locus_tag=IY40_RS21775;product=osmoprotectant ABC transporter ATP-binding protein OsmV;protein_id=WP_016927861.1;transl_table=11 NZ_JPQY01000040.1 RefSeq gene 75429 76730 . + . ID=gene-IY40_RS21780;Name=clcB;gbkey=Gene;gene=clcB;gene_biotype=protein_coding;locus_tag=IY40_RS21780;old_locus_tag=IY40_22160 NZ_JPQY01000040.1 Protein Homology CDS 75429 76730 . + 0 ID=cds-WP_043143266.1;Parent=gene-IY40_RS21780;Dbxref=GenBank:WP_043143266.1;Name=WP_043143266.1;Ontology_term=GO:0006821,GO:0010447,GO:0005247,GO:0016020;gbkey=CDS;gene=clcB;go_component=membrane|0016020||IEA;go_function=voltage-gated chloride channel activity|0005247||IEA;go_process=chloride transport|0006821||IEA,response to acidic pH|0010447||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015377780.1;locus_tag=IY40_RS21780;product=voltage-gated ClC-type chloride channel ClcB;protein_id=WP_043143266.1;transl_table=11 NZ_JPQY01000040.1 RefSeq gene 76727 77119 . - . ID=gene-IY40_RS21785;Name=IY40_RS21785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS21785;old_locus_tag=IY40_22165 NZ_JPQY01000040.1 Protein Homology CDS 76727 77119 . - 0 ID=cds-WP_043143268.1;Parent=gene-IY40_RS21785;Dbxref=GenBank:WP_043143268.1;Name=WP_043143268.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004938536.1;locus_tag=IY40_RS21785;product=helix-turn-helix domain-containing protein;protein_id=WP_043143268.1;transl_table=11 NZ_JPQY01000040.1 RefSeq gene 77189 77683 . + . ID=gene-IY40_RS21790;Name=IY40_RS21790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS21790;old_locus_tag=IY40_22170 NZ_JPQY01000040.1 Protein Homology CDS 77189 77683 . + 0 ID=cds-WP_043143271.1;Parent=gene-IY40_RS21790;Dbxref=GenBank:WP_043143271.1;Name=WP_043143271.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015377778.1;locus_tag=IY40_RS21790;product=DUF2938 family protein;protein_id=WP_043143271.1;transl_table=11 NZ_JPQY01000040.1 RefSeq gene 77689 78354 . - . ID=gene-IY40_RS21795;Name=bioD;gbkey=Gene;gene=bioD;gene_biotype=protein_coding;locus_tag=IY40_RS21795;old_locus_tag=IY40_22175 NZ_JPQY01000040.1 Protein Homology CDS 77689 78354 . - 0 ID=cds-WP_025302714.1;Parent=gene-IY40_RS21795;Dbxref=GenBank:WP_025302714.1;Name=WP_025302714.1;Ontology_term=GO:0009102,GO:0000287,GO:0004141,GO:0005524;gbkey=CDS;gene=bioD;go_function=magnesium ion binding|0000287||IEA,dethiobiotin synthase activity|0004141||IEA,ATP binding|0005524||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004944013.1;locus_tag=IY40_RS21795;product=dethiobiotin synthase;protein_id=WP_025302714.1;transl_table=11 NZ_JPQY01000040.1 RefSeq gene 78499 79716 . - . ID=gene-IY40_RS21800;Name=mlc;gbkey=Gene;gene=mlc;gene_biotype=protein_coding;gene_synonym=dgsA;locus_tag=IY40_RS21800;old_locus_tag=IY40_22180 NZ_JPQY01000040.1 Protein Homology CDS 78499 79716 . - 0 ID=cds-WP_025302713.1;Parent=gene-IY40_RS21800;Dbxref=GenBank:WP_025302713.1;Name=WP_025302713.1;Ontology_term=GO:0006355,GO:0003677,GO:0046872;gbkey=CDS;gene=mlc;go_function=DNA binding|0003677||IEA,metal ion binding|0046872||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192479.1;locus_tag=IY40_RS21800;product=sugar metabolism global transcriptional regulator Mlc;protein_id=WP_025302713.1;transl_table=11 NZ_JPQY01000040.1 RefSeq gene 79876 80766 . - . ID=gene-IY40_RS21805;Name=IY40_RS21805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS21805;old_locus_tag=IY40_22185 NZ_JPQY01000040.1 Protein Homology CDS 79876 80766 . - 0 ID=cds-WP_025302712.1;Parent=gene-IY40_RS21805;Dbxref=GenBank:WP_025302712.1;Name=WP_025302712.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016927866.1;locus_tag=IY40_RS21805;product=LysR substrate-binding domain-containing protein;protein_id=WP_025302712.1;transl_table=11 NZ_JPQY01000040.1 RefSeq gene 80914 82182 . + . ID=gene-IY40_RS21810;Name=IY40_RS21810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS21810;old_locus_tag=IY40_22190 NZ_JPQY01000040.1 Protein Homology CDS 80914 82182 . + 0 ID=cds-WP_031300458.1;Parent=gene-IY40_RS21810;Dbxref=GenBank:WP_031300458.1;Name=WP_031300458.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004938520.1;locus_tag=IY40_RS21810;product=MFS transporter;protein_id=WP_031300458.1;transl_table=11 NZ_JPQY01000040.1 RefSeq gene 82234 83520 . - . ID=gene-IY40_RS21815;Name=IY40_RS21815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS21815;old_locus_tag=IY40_22195 NZ_JPQY01000040.1 Protein Homology CDS 82234 83520 . - 0 ID=cds-WP_043143274.1;Parent=gene-IY40_RS21815;Dbxref=GenBank:WP_043143274.1;Name=WP_043143274.1;Ontology_term=GO:0005975,GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015377776.1;locus_tag=IY40_RS21815;product=glycoside hydrolase family 10 protein;protein_id=WP_043143274.1;transl_table=11 NZ_JPQY01000040.1 RefSeq gene 83647 85443 . - . ID=gene-IY40_RS21820;Name=IY40_RS21820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS21820;old_locus_tag=IY40_22200 NZ_JPQY01000040.1 Protein Homology CDS 83647 85443 . - 0 ID=cds-WP_043143276.1;Parent=gene-IY40_RS21820;Dbxref=GenBank:WP_043143276.1;Name=WP_043143276.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019455924.1;locus_tag=IY40_RS21820;product=glycoside hydrolase family 3 protein;protein_id=WP_043143276.1;transl_table=11 NZ_JPQY01000040.1 RefSeq gene 85810 86748 . + . ID=gene-IY40_RS21825;Name=tus;gbkey=Gene;gene=tus;gene_biotype=protein_coding;locus_tag=IY40_RS21825;old_locus_tag=IY40_22205 NZ_JPQY01000040.1 Protein Homology CDS 85810 86748 . + 0 ID=cds-WP_043143278.1;Parent=gene-IY40_RS21825;Dbxref=GenBank:WP_043143278.1;Name=WP_043143278.1;Ontology_term=GO:0006274,GO:0003677,GO:0005737;gbkey=CDS;gene=tus;go_component=cytoplasm|0005737||IEA;go_function=DNA binding|0003677||IEA;go_process=DNA replication termination|0006274||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015377774.1;locus_tag=IY40_RS21825;product=DNA replication terminus site-binding protein;protein_id=WP_043143278.1;transl_table=11 NZ_JPQY01000040.1 RefSeq gene 86738 87106 . - . ID=gene-IY40_RS21830;Name=IY40_RS21830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS21830;old_locus_tag=IY40_22210 NZ_JPQY01000040.1 Protein Homology CDS 86738 87106 . - 0 ID=cds-WP_028128189.1;Parent=gene-IY40_RS21830;Dbxref=GenBank:WP_028128189.1;Name=WP_028128189.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004938508.1;locus_tag=IY40_RS21830;product=VOC family protein;protein_id=WP_028128189.1;transl_table=11 NZ_JPQY01000040.1 RefSeq gene 87197 87886 . - . ID=gene-IY40_RS21835;Name=IY40_RS21835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS21835;old_locus_tag=IY40_22215 NZ_JPQY01000040.1 Protein Homology CDS 87197 87886 . - 0 ID=cds-WP_025302706.1;Parent=gene-IY40_RS21835;Dbxref=GenBank:WP_025302706.1;Name=WP_025302706.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019455927.1;locus_tag=IY40_RS21835;product=helix-turn-helix transcriptional regulator;protein_id=WP_025302706.1;transl_table=11 NZ_JPQY01000040.1 RefSeq gene 87888 88778 . - . ID=gene-IY40_RS21840;Name=IY40_RS21840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS21840;old_locus_tag=IY40_22220 NZ_JPQY01000040.1 Protein Homology CDS 87888 88778 . - 0 ID=cds-WP_043143283.1;Parent=gene-IY40_RS21840;Dbxref=GenBank:WP_043143283.1;Name=WP_043143283.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019455928.1;locus_tag=IY40_RS21840;product=LysR family transcriptional regulator;protein_id=WP_043143283.1;transl_table=11 NZ_JPQY01000040.1 RefSeq gene 88882 89541 . + . ID=gene-IY40_RS21845;Name=IY40_RS21845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS21845;old_locus_tag=IY40_22225 NZ_JPQY01000040.1 Protein Homology CDS 88882 89541 . + 0 ID=cds-WP_043143284.1;Parent=gene-IY40_RS21845;Dbxref=GenBank:WP_043143284.1;Name=WP_043143284.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004938500.1;locus_tag=IY40_RS21845;product=peroxiredoxin-like family protein;protein_id=WP_043143284.1;transl_table=11 NZ_JPQY01000040.1 RefSeq gene 89591 90988 . - . ID=gene-IY40_RS21850;Name=fumC;gbkey=Gene;gene=fumC;gene_biotype=protein_coding;locus_tag=IY40_RS21850;old_locus_tag=IY40_22230 NZ_JPQY01000040.1 Protein Homology CDS 89591 90988 . - 0 ID=cds-WP_025302703.1;Parent=gene-IY40_RS21850;Dbxref=GenBank:WP_025302703.1;Name=WP_025302703.1;Ontology_term=GO:0006106,GO:0004333,GO:0045239;gbkey=CDS;gene=fumC;go_component=tricarboxylic acid cycle heteromeric enzyme complex|0045239||IEA;go_function=fumarate hydratase activity|0004333||IEA;go_process=fumarate metabolic process|0006106||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017892719.1;locus_tag=IY40_RS21850;product=class II fumarate hydratase;protein_id=WP_025302703.1;transl_table=11 NZ_JPQY01000040.1 RefSeq gene 91219 91551 . - . ID=gene-IY40_RS21855;Name=IY40_RS21855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS21855;old_locus_tag=IY40_22235 NZ_JPQY01000040.1 Protein Homology CDS 91219 91551 . - 0 ID=cds-WP_043143286.1;Parent=gene-IY40_RS21855;Dbxref=GenBank:WP_043143286.1;Name=WP_043143286.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015377770.1;locus_tag=IY40_RS21855;product=hypothetical protein;protein_id=WP_043143286.1;transl_table=11 NZ_JPQY01000040.1 RefSeq gene 92028 93206 . + . ID=gene-IY40_RS21860;Name=manA;gbkey=Gene;gene=manA;gene_biotype=protein_coding;locus_tag=IY40_RS21860;old_locus_tag=IY40_22240 NZ_JPQY01000040.1 Protein Homology CDS 92028 93206 . + 0 ID=cds-WP_025302701.1;Parent=gene-IY40_RS21860;Dbxref=GenBank:WP_025302701.1;Name=WP_025302701.1;Ontology_term=GO:0009298,GO:0004476,GO:0008270;gbkey=CDS;gene=manA;go_function=mannose-6-phosphate isomerase activity|0004476||IEA,zinc ion binding|0008270||IEA;go_process=GDP-mannose biosynthetic process|0009298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015377769.1;locus_tag=IY40_RS21860;product=mannose-6-phosphate isomerase;protein_id=WP_025302701.1;transl_table=11 NZ_JPQY01000040.1 RefSeq gene 93347 94879 . + . ID=gene-IY40_RS21865;Name=IY40_RS21865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS21865;old_locus_tag=IY40_22245 NZ_JPQY01000040.1 Protein Homology CDS 93347 94879 . + 0 ID=cds-WP_025302700.1;Parent=gene-IY40_RS21865;Dbxref=GenBank:WP_025302700.1;Name=WP_025302700.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017892716.1;locus_tag=IY40_RS21865;product=YdgA family protein;protein_id=WP_025302700.1;transl_table=11 NZ_JPQY01000040.1 RefSeq gene 94924 96078 . - . ID=gene-IY40_RS21870;Name=IY40_RS21870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS21870;old_locus_tag=IY40_22250 NZ_JPQY01000040.1 Protein Homology CDS 94924 96078 . - 0 ID=cds-WP_025302699.1;Parent=gene-IY40_RS21870;Dbxref=GenBank:WP_025302699.1;Name=WP_025302699.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015377767.1;locus_tag=IY40_RS21870;product=serine hydrolase domain-containing protein;protein_id=WP_025302699.1;transl_table=11 NZ_JPQY01000040.1 RefSeq gene 96181 97089 . + . ID=gene-IY40_RS21875;Name=IY40_RS21875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS21875;old_locus_tag=IY40_22255 NZ_JPQY01000040.1 Protein Homology CDS 96181 97089 . + 0 ID=cds-WP_025302698.1;Parent=gene-IY40_RS21875;Dbxref=GenBank:WP_025302698.1;Name=WP_025302698.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015377766.1;locus_tag=IY40_RS21875;product=LysR family transcriptional regulator;protein_id=WP_025302698.1;transl_table=11 NZ_JPQY01000040.1 RefSeq gene 97116 98252 . - . ID=gene-IY40_RS21880;Name=blaSRT;gbkey=Gene;gene=blaSRT;gene_biotype=protein_coding;locus_tag=IY40_RS21880;old_locus_tag=IY40_22260 NZ_JPQY01000040.1 Protein Homology CDS 97116 98252 . - 0 ID=cds-WP_025302697.1;Parent=gene-IY40_RS21880;Dbxref=GenBank:WP_025302697.1;Name=WP_025302697.1;Ontology_term=GO:0008800;gbkey=CDS;gene=blaSRT;go_function=beta-lactamase activity|0008800||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_048321520.1;locus_tag=IY40_RS21880;product=SRT/SST family class C beta-lactamase;protein_id=WP_025302697.1;transl_table=11 NZ_JPQY01000040.1 RefSeq gene 98459 99340 . + . ID=gene-IY40_RS21885;Name=IY40_RS21885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS21885;old_locus_tag=IY40_22265 NZ_JPQY01000040.1 Protein Homology CDS 98459 99340 . + 0 ID=cds-WP_043143290.1;Parent=gene-IY40_RS21885;Dbxref=GenBank:WP_043143290.1;Name=WP_043143290.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004938477.1;locus_tag=IY40_RS21885;product=LysR family transcriptional regulator;protein_id=WP_043143290.1;transl_table=11 NZ_JPQY01000040.1 RefSeq gene 99337 100368 . - . ID=gene-IY40_RS21890;Name=IY40_RS21890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS21890;old_locus_tag=IY40_22270 NZ_JPQY01000040.1 Protein Homology CDS 99337 100368 . - 0 ID=cds-WP_025302695.1;Parent=gene-IY40_RS21890;Dbxref=GenBank:WP_025302695.1;Name=WP_025302695.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004874385.1;locus_tag=IY40_RS21890;product=Mal regulon transcriptional regulator MalI;protein_id=WP_025302695.1;transl_table=11 NZ_JPQY01000040.1 RefSeq gene 100592 102211 . + . ID=gene-IY40_RS21895;Name=malX;gbkey=Gene;gene=malX;gene_biotype=protein_coding;locus_tag=IY40_RS21895;old_locus_tag=IY40_22275 NZ_JPQY01000040.1 Protein Homology CDS 100592 102211 . + 0 ID=cds-WP_043143292.1;Parent=gene-IY40_RS21895;Dbxref=GenBank:WP_043143292.1;Name=WP_043143292.1;Ontology_term=GO:0009401,GO:0008982;gbkey=CDS;gene=malX;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013812745.1;locus_tag=IY40_RS21895;product=maltose/glucose-specific PTS transporter subunit IIBC;protein_id=WP_043143292.1;transl_table=11 NZ_JPQY01000040.1 RefSeq gene 102204 103385 . + . ID=gene-IY40_RS21900;Name=IY40_RS21900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS21900;old_locus_tag=IY40_22280 NZ_JPQY01000040.1 Protein Homology CDS 102204 103385 . + 0 ID=cds-WP_043143295.1;Parent=gene-IY40_RS21900;Dbxref=GenBank:WP_043143295.1;Name=WP_043143295.1;Ontology_term=GO:0009086,GO:0030170,GO:0047804;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA,cysteine-S-conjugate beta-lyase activity|0047804||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004938468.1;locus_tag=IY40_RS21900;product=MalY/PatB family protein;protein_id=WP_043143295.1;transl_table=11 NZ_JPQY01000040.1 RefSeq gene 103418 103786 . - . ID=gene-IY40_RS21905;Name=IY40_RS21905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS21905;old_locus_tag=IY40_22285 NZ_JPQY01000040.1 Protein Homology CDS 103418 103786 . - 0 ID=cds-WP_033640470.1;Parent=gene-IY40_RS21905;Dbxref=GenBank:WP_033640470.1;Name=WP_033640470.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004938465.1;locus_tag=IY40_RS21905;product=hypothetical protein;protein_id=WP_033640470.1;transl_table=11 NZ_JPQY01000040.1 RefSeq gene 103783 104379 . - . ID=gene-IY40_RS21910;Name=IY40_RS21910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS21910;old_locus_tag=IY40_22290 NZ_JPQY01000040.1 Protein Homology CDS 103783 104379 . - 0 ID=cds-WP_025302691.1;Parent=gene-IY40_RS21910;Dbxref=GenBank:WP_025302691.1;Name=WP_025302691.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004938462.1;locus_tag=IY40_RS21910;product=NUDIX domain-containing protein;protein_id=WP_025302691.1;transl_table=11 NZ_JPQY01000040.1 RefSeq gene 104477 105232 . + . ID=gene-IY40_RS21915;Name=IY40_RS21915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS21915;old_locus_tag=IY40_22295 NZ_JPQY01000040.1 Protein Homology CDS 104477 105232 . + 0 ID=cds-WP_025302690.1;Parent=gene-IY40_RS21915;Dbxref=GenBank:WP_025302690.1;Name=WP_025302690.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004943956.1;locus_tag=IY40_RS21915;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_025302690.1;transl_table=11 NZ_JPQY01000040.1 RefSeq gene 105368 106366 . + . ID=gene-IY40_RS21920;Name=add;gbkey=Gene;gene=add;gene_biotype=protein_coding;locus_tag=IY40_RS21920;old_locus_tag=IY40_22300 NZ_JPQY01000040.1 Protein Homology CDS 105368 106366 . + 0 ID=cds-WP_016927887.1;Parent=gene-IY40_RS21920;Dbxref=GenBank:WP_016927887.1;Name=WP_016927887.1;Ontology_term=GO:0009168,GO:0004000;gbkey=CDS;gene=add;go_function=adenosine deaminase activity|0004000||IEA;go_process=purine ribonucleoside monophosphate biosynthetic process|0009168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012144981.1;locus_tag=IY40_RS21920;product=adenosine deaminase;protein_id=WP_016927887.1;transl_table=11 NZ_JPQY01000040.1 RefSeq gene 106477 107022 . + . ID=gene-IY40_RS21925;Name=IY40_RS21925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS21925;old_locus_tag=IY40_22305 NZ_JPQY01000040.1 Protein Homology CDS 106477 107022 . + 0 ID=cds-WP_043143298.1;Parent=gene-IY40_RS21925;Dbxref=GenBank:WP_043143298.1;Name=WP_043143298.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016927888.1;locus_tag=IY40_RS21925;product=AAA family ATPase;protein_id=WP_043143298.1;transl_table=11 NZ_JPQY01000040.1 RefSeq gene 107034 108038 . - . ID=gene-IY40_RS21930;Name=IY40_RS21930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS21930;old_locus_tag=IY40_22310 NZ_JPQY01000040.1 Protein Homology CDS 107034 108038 . - 0 ID=cds-WP_016927889.1;Parent=gene-IY40_RS21930;Dbxref=GenBank:WP_016927889.1;Name=WP_016927889.1;Ontology_term=GO:0006810,GO:0015293,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013812734.1;locus_tag=IY40_RS21930;product=bile acid:sodium symporter family protein;protein_id=WP_016927889.1;transl_table=11 NZ_JPQY01000040.1 RefSeq gene 108111 109151 . - . ID=gene-IY40_RS21935;Name=IY40_RS21935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS21935;old_locus_tag=IY40_22315 NZ_JPQY01000040.1 Protein Homology CDS 108111 109151 . - 0 ID=cds-WP_043143300.1;Parent=gene-IY40_RS21935;Dbxref=GenBank:WP_043143300.1;Name=WP_043143300.1;Ontology_term=GO:0000166;gbkey=CDS;go_function=nucleotide binding|0000166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004943923.1;locus_tag=IY40_RS21935;product=oxidoreductase;protein_id=WP_043143300.1;transl_table=11 NZ_JPQY01000040.1 RefSeq gene 109374 109814 . + . ID=gene-IY40_RS21940;Name=IY40_RS21940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS21940;old_locus_tag=IY40_22320 NZ_JPQY01000040.1 Protein Homology CDS 109374 109814 . + 0 ID=cds-WP_043143301.1;Parent=gene-IY40_RS21940;Dbxref=GenBank:WP_043143301.1;Name=WP_043143301.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210594.1;locus_tag=IY40_RS21940;product=DUF2569 domain-containing protein;protein_id=WP_043143301.1;transl_table=11 NZ_JPQY01000040.1 RefSeq gene 109950 110531 . + . ID=gene-IY40_RS21945;Name=rsxA;gbkey=Gene;gene=rsxA;gene_biotype=protein_coding;locus_tag=IY40_RS21945;old_locus_tag=IY40_22325 NZ_JPQY01000040.1 Protein Homology CDS 109950 110531 . + 0 ID=cds-WP_004938443.1;Parent=gene-IY40_RS21945;Dbxref=GenBank:WP_004938443.1;Name=WP_004938443.1;Ontology_term=GO:0022900,GO:0016020;gbkey=CDS;gene=rsxA;go_component=membrane|0016020||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010845872.1;locus_tag=IY40_RS21945;product=electron transport complex subunit RsxA;protein_id=WP_004938443.1;transl_table=11 NZ_JPQY01000040.1 RefSeq gene 110531 111103 . + . ID=gene-IY40_RS21950;Name=rsxB;gbkey=Gene;gene=rsxB;gene_biotype=protein_coding;locus_tag=IY40_RS21950;old_locus_tag=IY40_22330 NZ_JPQY01000040.1 Protein Homology CDS 110531 111103 . + 0 ID=cds-WP_004938428.1;Parent=gene-IY40_RS21950;Dbxref=GenBank:WP_004938428.1;Name=WP_004938428.1;Ontology_term=GO:0022900,GO:0009055,GO:0051536;gbkey=CDS;gene=rsxB;go_function=electron transfer activity|0009055||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012144971.1;locus_tag=IY40_RS21950;product=electron transport complex subunit RsxB;protein_id=WP_004938428.1;transl_table=11 NZ_JPQY01000040.1 RefSeq gene 111096 113023 . + . ID=gene-IY40_RS21955;Name=rsxC;end_range=113023,.;gbkey=Gene;gene=rsxC;gene_biotype=protein_coding;locus_tag=IY40_RS21955;old_locus_tag=IY40_22335;partial=true NZ_JPQY01000040.1 Protein Homology CDS 111096 113023 . + 0 ID=cds-WP_043143303.1;Parent=gene-IY40_RS21955;Dbxref=GenBank:WP_043143303.1;Name=WP_043143303.1;Ontology_term=GO:0009055,GO:0051539,GO:0016020;end_range=113023,.;gbkey=CDS;gene=rsxC;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012144970.1;locus_tag=IY40_RS21955;partial=true;product=electron transport complex subunit RsxC;protein_id=WP_043143303.1;transl_table=11 ##sequence-region NZ_JPQY01000041.1 1 13182 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=615 NZ_JPQY01000041.1 RefSeq region 1 13182 . + . ID=NZ_JPQY01000041.1:1..13182;Dbxref=taxon:615;collected-by=Mahloro H. Serepa%3B Vincent M. Gray;collection-date=2013-04-11;country=South Africa: North West Province;gbkey=Src;genome=genomic;identified-by=Mahloro H. Serepa%3B Vincent M. Gray;isolation-source=entomopathogenic nematode Oscheius sp. MCB living in soil;mol_type=genomic DNA;nat-host=Oscheius sp. MCB;strain=MCB NZ_JPQY01000041.1 RefSeq pseudogene 1 1146 . + . ID=gene-IY40_RS26260;Name=IY40_RS26260;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IY40_RS26260;old_locus_tag=IY40_22340;partial=true;pseudo=true;start_range=.,1 NZ_JPQY01000041.1 Protein Homology CDS 1 1146 . + 0 ID=cds-IY40_RS26260;Parent=gene-IY40_RS26260;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF044565.3;locus_tag=IY40_RS26260;partial=true;product=Ig-like domain-containing protein;pseudo=true;start_range=.,1;transl_table=11 NZ_JPQY01000041.1 RefSeq pseudogene 1329 2274 . - . ID=gene-IY40_RS25805;Name=IY40_RS25805;end_range=2274,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IY40_RS25805;old_locus_tag=IY40_22345;partial=true;pseudo=true;start_range=.,1329 NZ_JPQY01000041.1 Protein Homology CDS 1329 2274 . - 0 ID=cds-IY40_RS25805;Parent=gene-IY40_RS25805;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=2274,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612308.1;locus_tag=IY40_RS25805;partial=true;product=IS481 family transposase;pseudo=true;start_range=.,1329;transl_table=11 NZ_JPQY01000041.1 RefSeq gene 2529 3230 . + . ID=gene-IY40_RS21970;Name=IY40_RS21970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS21970;old_locus_tag=IY40_22350 NZ_JPQY01000041.1 Protein Homology CDS 2529 3230 . + 0 ID=cds-WP_043143324.1;Parent=gene-IY40_RS21970;Dbxref=GenBank:WP_043143324.1;Name=WP_043143324.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004716773.1;locus_tag=IY40_RS21970;product=RraA family protein;protein_id=WP_043143324.1;transl_table=11 NZ_JPQY01000041.1 RefSeq gene 3257 3787 . + . ID=gene-IY40_RS21975;Name=IY40_RS21975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS21975;old_locus_tag=IY40_22355 NZ_JPQY01000041.1 Protein Homology CDS 3257 3787 . + 0 ID=cds-WP_043143326.1;Parent=gene-IY40_RS21975;Dbxref=GenBank:WP_043143326.1;Name=WP_043143326.1;Ontology_term=GO:0009094,GO:0004664;gbkey=CDS;go_function=prephenate dehydratase activity|0004664||IEA;go_process=L-phenylalanine biosynthetic process|0009094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004716772.1;locus_tag=IY40_RS21975;product=prephenate dehydratase domain-containing protein;protein_id=WP_043143326.1;transl_table=11 NZ_JPQY01000041.1 RefSeq gene 3839 4237 . + . ID=gene-IY40_RS21980;Name=IY40_RS21980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS21980;old_locus_tag=IY40_22360 NZ_JPQY01000041.1 Protein Homology CDS 3839 4237 . + 0 ID=cds-WP_043143328.1;Parent=gene-IY40_RS21980;Dbxref=GenBank:WP_043143328.1;Name=WP_043143328.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004716771.1;locus_tag=IY40_RS21980;product=cupin domain-containing protein;protein_id=WP_043143328.1;transl_table=11 NZ_JPQY01000041.1 RefSeq gene 4302 5696 . + . ID=gene-IY40_RS21985;Name=IY40_RS21985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS21985;old_locus_tag=IY40_22365 NZ_JPQY01000041.1 Protein Homology CDS 4302 5696 . + 0 ID=cds-WP_043143330.1;Parent=gene-IY40_RS21985;Dbxref=GenBank:WP_043143330.1;Name=WP_043143330.1;Ontology_term=GO:0009073,GO:0003849;gbkey=CDS;go_function=3-deoxy-7-phosphoheptulonate synthase activity|0003849||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004716770.1;locus_tag=IY40_RS21985;product=3-deoxy-7-phosphoheptulonate synthase class II;protein_id=WP_043143330.1;transl_table=11 NZ_JPQY01000041.1 RefSeq pseudogene 6018 6216 . + . ID=gene-IY40_RS26065;Name=IY40_RS26065;end_range=6216,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IY40_RS26065;partial=true;pseudo=true NZ_JPQY01000041.1 Protein Homology CDS 6018 6216 . + 0 ID=cds-IY40_RS26065;Parent=gene-IY40_RS26065;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=6216,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490541.1;locus_tag=IY40_RS26065;partial=true;product=Rpn family recombination-promoting nuclease/putative transposase;pseudo=true;transl_table=11 NZ_JPQY01000041.1 RefSeq gene 6516 8087 . - . ID=gene-IY40_RS21990;Name=tnpC;gbkey=Gene;gene=tnpC;gene_biotype=protein_coding;locus_tag=IY40_RS21990;old_locus_tag=IY40_22380 NZ_JPQY01000041.1 Protein Homology CDS 6516 8087 . - 0 ID=cds-WP_043143333.1;Parent=gene-IY40_RS21990;Dbxref=GenBank:WP_043143333.1;Name=WP_043143333.1;Ontology_term=GO:0004803;gbkey=CDS;gene=tnpC;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000099160.1;locus_tag=IY40_RS21990;product=IS66 family transposase;protein_id=WP_043143333.1;transl_table=11 NZ_JPQY01000041.1 RefSeq gene 8107 8454 . - . ID=gene-IY40_RS21995;Name=tnpB;gbkey=Gene;gene=tnpB;gene_biotype=protein_coding;locus_tag=IY40_RS21995;old_locus_tag=IY40_22385 NZ_JPQY01000041.1 Protein Homology CDS 8107 8454 . - 0 ID=cds-WP_043143335.1;Parent=gene-IY40_RS21995;Dbxref=GenBank:WP_043143335.1;Name=WP_043143335.1;Note=TnpB%2C as the term is used for proteins encoded by IS66 family insertion elements%2C is considered an accessory protein%2C since TnpC%2C encoded by a neighboring gene%2C is a DDE family transposase.;gbkey=CDS;gene=tnpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_858152.1;locus_tag=IY40_RS21995;product=IS66 family insertion sequence element accessory protein TnpB;protein_id=WP_043143335.1;transl_table=11 NZ_JPQY01000041.1 RefSeq pseudogene 8451 8564 . - . ID=gene-IY40_RS26405;Name=IY40_RS26405;end_range=8564,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IY40_RS26405;partial=true;pseudo=true NZ_JPQY01000041.1 Protein Homology CDS 8451 8564 . - 0 ID=cds-IY40_RS26405;Parent=gene-IY40_RS26405;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=8564,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013511944.1;locus_tag=IY40_RS26405;partial=true;product=IS66-like element accessory protein TnpA;pseudo=true;transl_table=11 NZ_JPQY01000041.1 RefSeq pseudogene 8563 9687 . - . ID=gene-IY40_RS22000;Name=tnpC;gbkey=Gene;gene=tnpC;gene_biotype=pseudogene;locus_tag=IY40_RS22000;partial=true;pseudo=true;start_range=.,8563 NZ_JPQY01000041.1 Protein Homology CDS 8563 9687 . - 0 ID=cds-IY40_RS22000;Parent=gene-IY40_RS22000;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;gbkey=CDS;gene=tnpC;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001562684.1;locus_tag=IY40_RS22000;partial=true;product=IS66 family transposase;pseudo=true;start_range=.,8563;transl_table=11 NZ_JPQY01000041.1 RefSeq pseudogene 9707 9894 . - . ID=gene-IY40_RS26535;Name=tnpB;end_range=9894,.;gbkey=Gene;gene=tnpB;gene_biotype=pseudogene;locus_tag=IY40_RS26535;partial=true;pseudo=true NZ_JPQY01000041.1 Protein Homology CDS 9707 9894 . - 0 ID=cds-IY40_RS26535;Parent=gene-IY40_RS26535;Note=TnpB%2C as the term is used for proteins encoded by IS66 family insertion elements%2C is considered an accessory protein%2C since TnpC%2C encoded by a neighboring gene%2C is a DDE family transposase.%3B frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=9894,.;gbkey=CDS;gene=tnpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_858152.1;locus_tag=IY40_RS26535;partial=true;product=IS66 family insertion sequence element accessory protein TnpB;pseudo=true;transl_table=11 NZ_JPQY01000041.1 RefSeq pseudogene 9913 10041 . + . ID=gene-IY40_RS26270;Name=IY40_RS26270;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IY40_RS26270;partial=true;pseudo=true;start_range=.,9913 NZ_JPQY01000041.1 Protein Homology CDS 9913 10041 . + 0 ID=cds-IY40_RS26270;Parent=gene-IY40_RS26270;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017947.6;locus_tag=IY40_RS26270;partial=true;product=DinI-like family protein;pseudo=true;start_range=.,9913;transl_table=11 NZ_JPQY01000041.1 RefSeq gene 10423 12003 . + . ID=gene-IY40_RS26410;Name=IY40_RS26410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS26410 NZ_JPQY01000041.1 Protein Homology CDS 10423 12003 . + 0 ID=cds-WP_200877956.1;Parent=gene-IY40_RS26410;Dbxref=GenBank:WP_200877956.1;Name=WP_200877956.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013810.6;locus_tag=IY40_RS26410;product=hypothetical protein;protein_id=WP_200877956.1;transl_table=11 NZ_JPQY01000041.1 RefSeq pseudogene 12113 12338 . + . ID=gene-IY40_RS22010;Name=tnpB;gbkey=Gene;gene=tnpB;gene_biotype=pseudogene;locus_tag=IY40_RS22010;old_locus_tag=IY40_22400;partial=true;pseudo=true;start_range=.,12113 NZ_JPQY01000041.1 Protein Homology CDS 12113 12338 . + 0 ID=cds-IY40_RS22010;Parent=gene-IY40_RS22010;Note=TnpB%2C as the term is used for proteins encoded by IS66 family insertion elements%2C is considered an accessory protein%2C since TnpC%2C encoded by a neighboring gene%2C is a DDE family transposase.%3B frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;gene=tnpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311895.1;locus_tag=IY40_RS22010;partial=true;product=IS66 family insertion sequence element accessory protein TnpB;pseudo=true;start_range=.,12113;transl_table=11 NZ_JPQY01000041.1 RefSeq pseudogene 12369 13182 . + . ID=gene-IY40_RS22015;Name=IY40_RS22015;end_range=13182,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IY40_RS22015;old_locus_tag=IY40_22405;partial=true;pseudo=true NZ_JPQY01000041.1 Protein Homology CDS 12369 13182 . + 0 ID=cds-IY40_RS22015;Parent=gene-IY40_RS22015;Note=frameshifted%3B incomplete%3B missing C-terminus;end_range=13182,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014839879.1;locus_tag=IY40_RS22015;partial=true;product=IS66 family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_JPQY01000042.1 1 74770 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=615 NZ_JPQY01000042.1 RefSeq region 1 74770 . + . ID=NZ_JPQY01000042.1:1..74770;Dbxref=taxon:615;collected-by=Mahloro H. Serepa%3B Vincent M. Gray;collection-date=2013-04-11;country=South Africa: North West Province;gbkey=Src;genome=genomic;identified-by=Mahloro H. Serepa%3B Vincent M. Gray;isolation-source=entomopathogenic nematode Oscheius sp. MCB living in soil;mol_type=genomic DNA;nat-host=Oscheius sp. MCB;strain=MCB NZ_JPQY01000042.1 RefSeq gene 148 1491 . + . ID=gene-IY40_RS22020;Name=IY40_RS22020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS22020;old_locus_tag=IY40_22415 NZ_JPQY01000042.1 Protein Homology CDS 148 1491 . + 0 ID=cds-WP_043143342.1;Parent=gene-IY40_RS22020;Dbxref=GenBank:WP_043143342.1;Name=WP_043143342.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019079185.1;locus_tag=IY40_RS22020;product=2-hydroxycarboxylate transporter family protein;protein_id=WP_043143342.1;transl_table=11 NZ_JPQY01000042.1 RefSeq gene 1824 3242 . + . ID=gene-IY40_RS22030;Name=IY40_RS22030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS22030;old_locus_tag=IY40_22425 NZ_JPQY01000042.1 Protein Homology CDS 1824 3242 . + 0 ID=cds-WP_025302576.1;Parent=gene-IY40_RS22030;Dbxref=GenBank:WP_025302576.1;Name=WP_025302576.1;Ontology_term=GO:0006508,GO:0004222,GO:0046872,GO:0005615;gbkey=CDS;go_component=extracellular space|0005615||IEA;go_function=metalloendopeptidase activity|0004222||IEA,metal ion binding|0046872||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004931527.1;locus_tag=IY40_RS22030;product=serralysin family metalloprotease;protein_id=WP_025302576.1;transl_table=11 NZ_JPQY01000042.1 RefSeq gene 3389 3598 . - . ID=gene-IY40_RS22035;Name=IY40_RS22035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS22035;old_locus_tag=IY40_22430 NZ_JPQY01000042.1 Protein Homology CDS 3389 3598 . - 0 ID=cds-WP_004931526.1;Parent=gene-IY40_RS22035;Dbxref=GenBank:WP_004931526.1;Name=WP_004931526.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012144839.1;locus_tag=IY40_RS22035;product=hypothetical protein;protein_id=WP_004931526.1;transl_table=11 NZ_JPQY01000042.1 RefSeq gene 3758 3910 . + . ID=gene-IY40_RS26415;Name=IY40_RS26415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS26415 NZ_JPQY01000042.1 Protein Homology CDS 3758 3910 . + 0 ID=cds-WP_162837925.1;Parent=gene-IY40_RS26415;Dbxref=GenBank:WP_162837925.1;Name=WP_162837925.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016928014.1;locus_tag=IY40_RS26415;product=hypothetical protein;protein_id=WP_162837925.1;transl_table=11 NZ_JPQY01000042.1 RefSeq gene 3949 4041 . - . ID=gene-IY40_RS26540;Name=yniD;gbkey=Gene;gene=yniD;gene_biotype=protein_coding;locus_tag=IY40_RS26540 NZ_JPQY01000042.1 Protein Homology CDS 3949 4041 . - 0 ID=cds-WP_016928013.1;Parent=gene-IY40_RS26540;Dbxref=GenBank:WP_016928013.1;Name=WP_016928013.1;gbkey=CDS;gene=yniD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010426102.1;locus_tag=IY40_RS26540;product=small membrane protein YniD;protein_id=WP_016928013.1;transl_table=11 NZ_JPQY01000042.1 RefSeq gene 4380 4772 . + . ID=gene-IY40_RS22040;Name=IY40_RS22040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS22040;old_locus_tag=IY40_22450 NZ_JPQY01000042.1 Protein Homology CDS 4380 4772 . + 0 ID=cds-WP_004931522.1;Parent=gene-IY40_RS22040;Dbxref=GenBank:WP_004931522.1;Name=WP_004931522.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004931522.1;locus_tag=IY40_RS22040;product=ASCH domain-containing protein;protein_id=WP_004931522.1;transl_table=11 NZ_JPQY01000042.1 RefSeq gene 4777 5376 . + . ID=gene-IY40_RS22045;Name=IY40_RS22045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS22045;old_locus_tag=IY40_22455 NZ_JPQY01000042.1 Protein Homology CDS 4777 5376 . + 0 ID=cds-WP_025302577.1;Parent=gene-IY40_RS22045;Dbxref=GenBank:WP_025302577.1;Name=WP_025302577.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019454864.1;locus_tag=IY40_RS22045;product=C39 family peptidase;protein_id=WP_025302577.1;transl_table=11 NZ_JPQY01000042.1 RefSeq gene 5432 5671 . - . ID=gene-IY40_RS22050;Name=IY40_RS22050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS22050;old_locus_tag=IY40_22460 NZ_JPQY01000042.1 Protein Homology CDS 5432 5671 . - 0 ID=cds-WP_025302578.1;Parent=gene-IY40_RS22050;Dbxref=GenBank:WP_025302578.1;Name=WP_025302578.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015705939.1;locus_tag=IY40_RS22050;product=DUF1480 family protein;protein_id=WP_025302578.1;transl_table=11 NZ_JPQY01000042.1 RefSeq gene 5807 6739 . - . ID=gene-IY40_RS22055;Name=IY40_RS22055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS22055;old_locus_tag=IY40_22465 NZ_JPQY01000042.1 Protein Homology CDS 5807 6739 . - 0 ID=cds-WP_025302579.1;Parent=gene-IY40_RS22055;Dbxref=GenBank:WP_025302579.1;Name=WP_025302579.1;Ontology_term=GO:0005576;gbkey=CDS;go_component=extracellular region|0005576||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013812599.1;locus_tag=IY40_RS22055;product=Csu type fimbrial protein;protein_id=WP_025302579.1;transl_table=11 NZ_JPQY01000042.1 RefSeq gene 6760 9180 . - . ID=gene-IY40_RS22060;Name=IY40_RS22060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS22060;old_locus_tag=IY40_22470 NZ_JPQY01000042.1 Protein Homology CDS 6760 9180 . - 0 ID=cds-WP_235211388.1;Parent=gene-IY40_RS22060;Dbxref=GenBank:WP_235211388.1;Name=WP_235211388.1;Ontology_term=GO:0009297,GO:0015473,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=fimbrial usher porin activity|0015473||IEA;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004931512.1;locus_tag=IY40_RS22060;product=fimbria/pilus outer membrane usher protein;protein_id=WP_235211388.1;transl_table=11 NZ_JPQY01000042.1 RefSeq gene 9248 10012 . - . ID=gene-IY40_RS22065;Name=IY40_RS22065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS22065;old_locus_tag=IY40_22475 NZ_JPQY01000042.1 Protein Homology CDS 9248 10012 . - 0 ID=cds-WP_025302581.1;Parent=gene-IY40_RS22065;Dbxref=GenBank:WP_025302581.1;Name=WP_025302581.1;Ontology_term=GO:0006457,GO:0043711,GO:0030288;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_process=protein folding|0006457||IEA,pilus organization|0043711||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004931510.1;locus_tag=IY40_RS22065;product=fimbrial biogenesis chaperone;protein_id=WP_025302581.1;transl_table=11 NZ_JPQY01000042.1 RefSeq gene 10039 10587 . - . ID=gene-IY40_RS22070;Name=IY40_RS22070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS22070;old_locus_tag=IY40_22480 NZ_JPQY01000042.1 Protein Homology CDS 10039 10587 . - 0 ID=cds-WP_086013591.1;Parent=gene-IY40_RS22070;Dbxref=GenBank:WP_086013591.1;Name=WP_086013591.1;Ontology_term=GO:0005576;gbkey=CDS;go_component=extracellular region|0005576||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004943498.1;locus_tag=IY40_RS22070;product=Csu type fimbrial protein;protein_id=WP_086013591.1;transl_table=11 NZ_JPQY01000042.1 RefSeq gene 10593 11096 . - . ID=gene-IY40_RS22075;Name=IY40_RS22075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS22075;old_locus_tag=IY40_22485 NZ_JPQY01000042.1 Protein Homology CDS 10593 11096 . - 0 ID=cds-WP_025302583.1;Parent=gene-IY40_RS22075;Dbxref=GenBank:WP_025302583.1;Name=WP_025302583.1;Ontology_term=GO:0005576;gbkey=CDS;go_component=extracellular region|0005576||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019454870.1;locus_tag=IY40_RS22075;product=Csu type fimbrial protein;protein_id=WP_025302583.1;transl_table=11 NZ_JPQY01000042.1 RefSeq gene 11099 11638 . - . ID=gene-IY40_RS22080;Name=IY40_RS22080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS22080;old_locus_tag=IY40_22490 NZ_JPQY01000042.1 Protein Homology CDS 11099 11638 . - 0 ID=cds-WP_016928005.1;Parent=gene-IY40_RS22080;Dbxref=GenBank:WP_016928005.1;Name=WP_016928005.1;Ontology_term=GO:0005576;gbkey=CDS;go_component=extracellular region|0005576||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016928005.1;locus_tag=IY40_RS22080;product=Csu type fimbrial protein;protein_id=WP_016928005.1;transl_table=11 NZ_JPQY01000042.1 RefSeq gene 11914 13350 . - . ID=gene-IY40_RS22085;Name=rsmF;gbkey=Gene;gene=rsmF;gene_biotype=protein_coding;locus_tag=IY40_RS22085;old_locus_tag=IY40_22495 NZ_JPQY01000042.1 Protein Homology CDS 11914 13350 . - 0 ID=cds-WP_043143345.1;Parent=gene-IY40_RS22085;Dbxref=GenBank:WP_043143345.1;Name=WP_043143345.1;Ontology_term=GO:0001510,GO:0003723,GO:0008649;gbkey=CDS;gene=rsmF;go_function=RNA binding|0003723||IEA,rRNA methyltransferase activity|0008649||IEA;go_process=RNA methylation|0001510||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004931503.1;locus_tag=IY40_RS22085;product=16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF;protein_id=WP_043143345.1;transl_table=11 NZ_JPQY01000042.1 RefSeq gene 13453 16083 . - . ID=gene-IY40_RS22090;Name=IY40_RS22090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS22090;old_locus_tag=IY40_22500 NZ_JPQY01000042.1 Protein Homology CDS 13453 16083 . - 0 ID=cds-WP_025302585.1;Parent=gene-IY40_RS22090;Dbxref=GenBank:WP_025302585.1;Name=WP_025302585.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019454875.1;locus_tag=IY40_RS22090;product=PqiB family protein;protein_id=WP_025302585.1;transl_table=11 NZ_JPQY01000042.1 RefSeq gene 16052 17299 . - . ID=gene-IY40_RS22095;Name=yebS;gbkey=Gene;gene=yebS;gene_biotype=protein_coding;locus_tag=IY40_RS22095;old_locus_tag=IY40_22505 NZ_JPQY01000042.1 Protein Homology CDS 16052 17299 . - 0 ID=cds-WP_025302586.1;Parent=gene-IY40_RS22095;Dbxref=GenBank:WP_025302586.1;Name=WP_025302586.1;gbkey=CDS;gene=yebS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002367629.1;locus_tag=IY40_RS22095;product=membrane integrity lipid transport subunit YebS;protein_id=WP_025302586.1;transl_table=11 NZ_JPQY01000042.1 RefSeq gene 17555 18052 . + . ID=gene-IY40_RS22100;Name=IY40_RS22100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS22100;old_locus_tag=IY40_22510 NZ_JPQY01000042.1 Protein Homology CDS 17555 18052 . + 0 ID=cds-WP_025302587.1;Parent=gene-IY40_RS22100;Dbxref=GenBank:WP_025302587.1;Name=WP_025302587.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210850.1;locus_tag=IY40_RS22100;product=GAF domain-containing protein;protein_id=WP_025302587.1;transl_table=11 NZ_JPQY01000042.1 RefSeq gene 18149 18859 . + . ID=gene-IY40_RS22105;Name=proQ;gbkey=Gene;gene=proQ;gene_biotype=protein_coding;locus_tag=IY40_RS22105;old_locus_tag=IY40_22515 NZ_JPQY01000042.1 Protein Homology CDS 18149 18859 . + 0 ID=cds-WP_004931497.1;Parent=gene-IY40_RS22105;Dbxref=GenBank:WP_004931497.1;Name=WP_004931497.1;Ontology_term=GO:0010608,GO:0003723,GO:0033592,GO:0034057;gbkey=CDS;gene=proQ;go_function=RNA binding|0003723||IEA,RNA strand annealing activity|0033592||IEA,RNA strand-exchange activity|0034057||IEA;go_process=post-transcriptional regulation of gene expression|0010608||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004723358.1;locus_tag=IY40_RS22105;product=RNA chaperone ProQ;protein_id=WP_004931497.1;transl_table=11 NZ_JPQY01000042.1 RefSeq gene 18879 20927 . + . ID=gene-IY40_RS22110;Name=prc;gbkey=Gene;gene=prc;gene_biotype=protein_coding;gene_synonym=tsp;locus_tag=IY40_RS22110;old_locus_tag=IY40_22520 NZ_JPQY01000042.1 Protein Homology CDS 18879 20927 . + 0 ID=cds-WP_043143347.1;Parent=gene-IY40_RS22110;Dbxref=GenBank:WP_043143347.1;Name=WP_043143347.1;Ontology_term=GO:0006508,GO:0005515,GO:0008236;gbkey=CDS;gene=prc;go_function=protein binding|0005515||IEA,serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004931496.1;locus_tag=IY40_RS22110;product=carboxy terminal-processing peptidase;protein_id=WP_043143347.1;transl_table=11 NZ_JPQY01000042.1 RefSeq gene 21237 22121 . + . ID=gene-IY40_RS22115;Name=htpX;gbkey=Gene;gene=htpX;gene_biotype=protein_coding;locus_tag=IY40_RS22115;old_locus_tag=IY40_22525 NZ_JPQY01000042.1 Protein Homology CDS 21237 22121 . + 0 ID=cds-WP_016927998.1;Parent=gene-IY40_RS22115;Dbxref=GenBank:WP_016927998.1;Name=WP_016927998.1;Ontology_term=GO:0006508,GO:0004222;gbkey=CDS;gene=htpX;go_function=metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012144856.1;locus_tag=IY40_RS22115;product=protease HtpX;protein_id=WP_016927998.1;transl_table=11 NZ_JPQY01000042.1 RefSeq gene 22458 23165 . + . ID=gene-IY40_RS22120;Name=IY40_RS22120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS22120;old_locus_tag=IY40_22530 NZ_JPQY01000042.1 Protein Homology CDS 22458 23165 . + 0 ID=cds-WP_043143349.1;Parent=gene-IY40_RS22120;Dbxref=GenBank:WP_043143349.1;Name=WP_043143349.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016927997.1;locus_tag=IY40_RS22120;product=hypothetical protein;protein_id=WP_043143349.1;transl_table=11 NZ_JPQY01000042.1 RefSeq gene 23280 24674 . - . ID=gene-IY40_RS22125;Name=IY40_RS22125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS22125;old_locus_tag=IY40_22535 NZ_JPQY01000042.1 Protein Homology CDS 23280 24674 . - 0 ID=cds-WP_043143351.1;Parent=gene-IY40_RS22125;Dbxref=GenBank:WP_043143351.1;Name=WP_043143351.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016927996.1;locus_tag=IY40_RS22125;product=MFS transporter;protein_id=WP_043143351.1;transl_table=11 NZ_JPQY01000042.1 RefSeq gene 24906 25697 . + . ID=gene-IY40_RS22130;Name=kdgR;gbkey=Gene;gene=kdgR;gene_biotype=protein_coding;locus_tag=IY40_RS22130;old_locus_tag=IY40_22540 NZ_JPQY01000042.1 Protein Homology CDS 24906 25697 . + 0 ID=cds-WP_025302591.1;Parent=gene-IY40_RS22130;Dbxref=GenBank:WP_025302591.1;Name=WP_025302591.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=kdgR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416341.1;locus_tag=IY40_RS22130;product=DNA-binding transcriptional regulator KdgR;protein_id=WP_025302591.1;transl_table=11 NZ_JPQY01000042.1 RefSeq gene 25744 26547 . - . ID=gene-IY40_RS22135;Name=IY40_RS22135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS22135;old_locus_tag=IY40_22545 NZ_JPQY01000042.1 Protein Homology CDS 25744 26547 . - 0 ID=cds-WP_025302592.1;Parent=gene-IY40_RS22135;Dbxref=GenBank:WP_025302592.1;Name=WP_025302592.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016927993.1;locus_tag=IY40_RS22135;product=ABC transporter permease;protein_id=WP_025302592.1;transl_table=11 NZ_JPQY01000042.1 RefSeq gene 26550 27413 . - . ID=gene-IY40_RS22140;Name=phnU;gbkey=Gene;gene=phnU;gene_biotype=protein_coding;locus_tag=IY40_RS22140;old_locus_tag=IY40_22550 NZ_JPQY01000042.1 Protein Homology CDS 26550 27413 . - 0 ID=cds-WP_043143353.1;Parent=gene-IY40_RS22140;Dbxref=GenBank:WP_043143353.1;Name=WP_043143353.1;Ontology_term=GO:0033223,GO:0033225,GO:0016020;gbkey=CDS;gene=phnU;go_component=membrane|0016020||IEA;go_function=ATPase-coupled 2-aminoethylphosphonate transporter activity|0033225||IEA;go_process=2-aminoethylphosphonate transport|0033223||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004931471.1;locus_tag=IY40_RS22140;product=2-aminoethylphosphonate ABC transporter permease subunit;protein_id=WP_043143353.1;transl_table=11 NZ_JPQY01000042.1 RefSeq gene 27415 28545 . - . ID=gene-IY40_RS22145;Name=phnT;gbkey=Gene;gene=phnT;gene_biotype=protein_coding;locus_tag=IY40_RS22145;old_locus_tag=IY40_22555 NZ_JPQY01000042.1 Protein Homology CDS 27415 28545 . - 0 ID=cds-WP_394853079.1;Parent=gene-IY40_RS22145;Dbxref=GenBank:WP_394853079.1;Name=WP_394853079.1;Ontology_term=GO:0033223,GO:0005524,GO:0033225,GO:0009898,GO:0055052;gbkey=CDS;gene=phnT;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled 2-aminoethylphosphonate transporter activity|0033225||IEA;go_process=2-aminoethylphosphonate transport|0033223||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005286734.1;locus_tag=IY40_RS22145;product=2-aminoethylphosphonate ABC transport system ATP-binding subunit PhnT;protein_id=WP_394853079.1;transl_table=11 NZ_JPQY01000042.1 RefSeq gene 28548 29558 . - . ID=gene-IY40_RS22150;Name=IY40_RS22150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS22150;old_locus_tag=IY40_22560 NZ_JPQY01000042.1 Protein Homology CDS 28548 29558 . - 0 ID=cds-WP_043143357.1;Parent=gene-IY40_RS22150;Dbxref=GenBank:WP_043143357.1;Name=WP_043143357.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004931467.1;locus_tag=IY40_RS22150;product=2-aminoethylphosphonate ABC transporter substrate-binding protein;protein_id=WP_043143357.1;transl_table=11 NZ_JPQY01000042.1 RefSeq gene 29733 30452 . - . ID=gene-IY40_RS22155;Name=phnR;gbkey=Gene;gene=phnR;gene_biotype=protein_coding;locus_tag=IY40_RS22155;old_locus_tag=IY40_22565 NZ_JPQY01000042.1 Protein Homology CDS 29733 30452 . - 0 ID=cds-WP_004931465.1;Parent=gene-IY40_RS22155;Dbxref=GenBank:WP_004931465.1;Name=WP_004931465.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=phnR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004931465.1;locus_tag=IY40_RS22155;product=phosphonate utilization transcriptional regulator PhnR;protein_id=WP_004931465.1;transl_table=11 NZ_JPQY01000042.1 RefSeq gene 30608 31711 . + . ID=gene-IY40_RS22160;Name=phnW;gbkey=Gene;gene=phnW;gene_biotype=protein_coding;locus_tag=IY40_RS22160;old_locus_tag=IY40_22570 NZ_JPQY01000042.1 Protein Homology CDS 30608 31711 . + 0 ID=cds-WP_043143359.1;Parent=gene-IY40_RS22160;Dbxref=GenBank:WP_043143359.1;Name=WP_043143359.1;Ontology_term=GO:0019700,GO:0047304;gbkey=CDS;gene=phnW;go_function=2-aminoethylphosphonate-pyruvate transaminase activity|0047304||IEA;go_process=organic phosphonate catabolic process|0019700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459426.1;locus_tag=IY40_RS22160;product=2-aminoethylphosphonate--pyruvate transaminase;protein_id=WP_043143359.1;transl_table=11 NZ_JPQY01000042.1 RefSeq gene 31721 32530 . + . ID=gene-IY40_RS22165;Name=phnX;gbkey=Gene;gene=phnX;gene_biotype=protein_coding;locus_tag=IY40_RS22165;old_locus_tag=IY40_22575 NZ_JPQY01000042.1 Protein Homology CDS 31721 32530 . + 0 ID=cds-WP_025302597.1;Parent=gene-IY40_RS22165;Dbxref=GenBank:WP_025302597.1;Name=WP_025302597.1;Ontology_term=GO:0019700,GO:0050194;gbkey=CDS;gene=phnX;go_function=phosphonoacetaldehyde hydrolase activity|0050194||IEA;go_process=organic phosphonate catabolic process|0019700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229535.1;locus_tag=IY40_RS22165;product=phosphonoacetaldehyde hydrolase;protein_id=WP_025302597.1;transl_table=11 NZ_JPQY01000042.1 RefSeq gene 32594 33985 . - . ID=gene-IY40_RS22170;Name=IY40_RS22170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS22170;old_locus_tag=IY40_22580 NZ_JPQY01000042.1 Protein Homology CDS 32594 33985 . - 0 ID=cds-WP_043143361.1;Parent=gene-IY40_RS22170;Dbxref=GenBank:WP_043143361.1;Name=WP_043143361.1;Ontology_term=GO:0005215;gbkey=CDS;go_function=transporter activity|0005215||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120792.1;locus_tag=IY40_RS22170;product=L-cystine transporter;protein_id=WP_043143361.1;transl_table=11 NZ_JPQY01000042.1 RefSeq gene 34167 34715 . - . ID=gene-IY40_RS22175;Name=IY40_RS22175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS22175;old_locus_tag=IY40_22585 NZ_JPQY01000042.1 Protein Homology CDS 34167 34715 . - 0 ID=cds-WP_004931456.1;Parent=gene-IY40_RS22175;Dbxref=GenBank:WP_004931456.1;Name=WP_004931456.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016674211.1;locus_tag=IY40_RS22175;product=metal-dependent hydrolase;protein_id=WP_004931456.1;transl_table=11 NZ_JPQY01000042.1 RefSeq gene 35137 35802 . - . ID=gene-IY40_RS22180;Name=hxpB;gbkey=Gene;gene=hxpB;gene_biotype=protein_coding;locus_tag=IY40_RS22180;old_locus_tag=IY40_22590 NZ_JPQY01000042.1 Protein Homology CDS 35137 35802 . - 0 ID=cds-WP_043143363.1;Parent=gene-IY40_RS22180;Dbxref=GenBank:WP_043143363.1;Name=WP_043143363.1;gbkey=CDS;gene=hxpB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004875260.1;locus_tag=IY40_RS22180;product=hexitol phosphatase HxpB;protein_id=WP_043143363.1;transl_table=11 NZ_JPQY01000042.1 RefSeq gene 35867 37147 . - . ID=gene-IY40_RS22185;Name=IY40_RS22185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS22185;old_locus_tag=IY40_22595 NZ_JPQY01000042.1 Protein Homology CDS 35867 37147 . - 0 ID=cds-WP_025302600.1;Parent=gene-IY40_RS22185;Dbxref=GenBank:WP_025302600.1;Name=WP_025302600.1;Ontology_term=GO:0009268;gbkey=CDS;go_process=response to pH|0009268||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019454898.1;locus_tag=IY40_RS22185;product=HdeD family acid-resistance protein;protein_id=WP_025302600.1;transl_table=11 NZ_JPQY01000042.1 RefSeq gene 37333 37893 . + . ID=gene-IY40_RS22190;Name=IY40_RS22190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS22190;old_locus_tag=IY40_22600 NZ_JPQY01000042.1 Protein Homology CDS 37333 37893 . + 0 ID=cds-WP_025302601.1;Parent=gene-IY40_RS22190;Dbxref=GenBank:WP_025302601.1;Name=WP_025302601.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017892618.1;locus_tag=IY40_RS22190;product=YniB family protein;protein_id=WP_025302601.1;transl_table=11 NZ_JPQY01000042.1 RefSeq gene 37929 38798 . - . ID=gene-IY40_RS22195;Name=IY40_RS22195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS22195;old_locus_tag=IY40_22605 NZ_JPQY01000042.1 Protein Homology CDS 37929 38798 . - 0 ID=cds-WP_033642864.1;Parent=gene-IY40_RS22195;Dbxref=GenBank:WP_033642864.1;Name=WP_033642864.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004931452.1;locus_tag=IY40_RS22195;product=fructosamine kinase family protein;protein_id=WP_033642864.1;transl_table=11 NZ_JPQY01000042.1 RefSeq gene 39036 39890 . - . ID=gene-IY40_RS22200;Name=IY40_RS22200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS22200;old_locus_tag=IY40_22610 NZ_JPQY01000042.1 Protein Homology CDS 39036 39890 . - 0 ID=cds-WP_025302603.1;Parent=gene-IY40_RS22200;Dbxref=GenBank:WP_025302603.1;Name=WP_025302603.1;Ontology_term=GO:0030001,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=metal ion transport|0030001||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015377685.1;locus_tag=IY40_RS22200;product=metal ABC transporter permease;protein_id=WP_025302603.1;transl_table=11 NZ_JPQY01000042.1 RefSeq gene 39890 40750 . - . ID=gene-IY40_RS22205;Name=yfeC;gbkey=Gene;gene=yfeC;gene_biotype=protein_coding;locus_tag=IY40_RS22205;old_locus_tag=IY40_22615 NZ_JPQY01000042.1 Protein Homology CDS 39890 40750 . - 0 ID=cds-WP_015377686.1;Parent=gene-IY40_RS22205;Dbxref=GenBank:WP_015377686.1;Name=WP_015377686.1;gbkey=CDS;gene=yfeC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004931448.1;locus_tag=IY40_RS22205;product=iron/manganese ABC transporter permease subunit YfeC;protein_id=WP_015377686.1;transl_table=11 NZ_JPQY01000042.1 RefSeq gene 40750 41640 . - . ID=gene-IY40_RS22210;Name=IY40_RS22210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS22210;old_locus_tag=IY40_22620 NZ_JPQY01000042.1 Protein Homology CDS 40750 41640 . - 0 ID=cds-WP_043143367.1;Parent=gene-IY40_RS22210;Dbxref=GenBank:WP_043143367.1;Name=WP_043143367.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016927979.1;locus_tag=IY40_RS22210;product=manganese/iron ABC transporter ATP-binding protein;protein_id=WP_043143367.1;transl_table=11 NZ_JPQY01000042.1 RefSeq gene 41637 42581 . - . ID=gene-IY40_RS22215;Name=IY40_RS22215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS22215;old_locus_tag=IY40_22625 NZ_JPQY01000042.1 Protein Homology CDS 41637 42581 . - 0 ID=cds-WP_025302605.1;Parent=gene-IY40_RS22215;Dbxref=GenBank:WP_025302605.1;Name=WP_025302605.1;Ontology_term=GO:0030001,GO:0005524,GO:0042626,GO:0046872,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,metal ion binding|0046872||IEA,ABC-type transporter activity|0140359||IEA;go_process=metal ion transport|0030001||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006324893.1;locus_tag=IY40_RS22215;product=metal ABC transporter substrate-binding protein;protein_id=WP_025302605.1;transl_table=11 NZ_JPQY01000042.1 RefSeq gene 42713 43012 . - . ID=gene-IY40_RS22220;Name=ghoS;gbkey=Gene;gene=ghoS;gene_biotype=protein_coding;locus_tag=IY40_RS22220;old_locus_tag=IY40_22630 NZ_JPQY01000042.1 Protein Homology CDS 42713 43012 . - 0 ID=cds-WP_025302606.1;Parent=gene-IY40_RS22220;Dbxref=GenBank:WP_025302606.1;Name=WP_025302606.1;Ontology_term=GO:0004521;gbkey=CDS;gene=ghoS;go_function=RNA endonuclease activity|0004521||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006320296.1;locus_tag=IY40_RS22220;product=type V toxin-antitoxin system endoribonuclease antitoxin GhoS;protein_id=WP_025302606.1;transl_table=11 NZ_JPQY01000042.1 RefSeq gene 43122 43787 . + . ID=gene-IY40_RS22225;Name=IY40_RS22225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS22225;old_locus_tag=IY40_22635 NZ_JPQY01000042.1 Protein Homology CDS 43122 43787 . + 0 ID=cds-WP_025302607.1;Parent=gene-IY40_RS22225;Dbxref=GenBank:WP_025302607.1;Name=WP_025302607.1;Ontology_term=GO:0000270,GO:0071555,GO:0008933;gbkey=CDS;go_function=peptidoglycan lytic transglycosylase activity|0008933||IEA;go_process=peptidoglycan metabolic process|0000270||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002216686.1;locus_tag=IY40_RS22225;product=transglycosylase SLT domain-containing protein;protein_id=WP_025302607.1;transl_table=11 NZ_JPQY01000042.1 RefSeq gene 44095 44820 . + . ID=gene-IY40_RS22230;Name=IY40_RS22230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS22230;old_locus_tag=IY40_22640 NZ_JPQY01000042.1 Protein Homology CDS 44095 44820 . + 0 ID=cds-WP_025302608.1;Parent=gene-IY40_RS22230;Dbxref=GenBank:WP_025302608.1;Name=WP_025302608.1;Ontology_term=GO:0008873,GO:0008875;gbkey=CDS;go_function=gluconate 2-dehydrogenase activity|0008873||IEA,gluconate dehydrogenase activity|0008875||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006324895.1;locus_tag=IY40_RS22230;product=gluconate 2-dehydrogenase subunit 3 family protein;protein_id=WP_025302608.1;transl_table=11 NZ_JPQY01000042.1 RefSeq gene 44823 46604 . + . ID=gene-IY40_RS22235;Name=IY40_RS22235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS22235;old_locus_tag=IY40_22645 NZ_JPQY01000042.1 Protein Homology CDS 44823 46604 . + 0 ID=cds-WP_025302609.1;Parent=gene-IY40_RS22235;Dbxref=GenBank:WP_025302609.1;Name=WP_025302609.1;Ontology_term=GO:0016491,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227362.1;locus_tag=IY40_RS22235;product=GMC family oxidoreductase;protein_id=WP_025302609.1;transl_table=11 NZ_JPQY01000042.1 RefSeq gene 46617 47954 . + . ID=gene-IY40_RS22240;Name=IY40_RS22240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS22240;old_locus_tag=IY40_22650 NZ_JPQY01000042.1 Protein Homology CDS 46617 47954 . + 0 ID=cds-WP_043143369.1;Parent=gene-IY40_RS22240;Dbxref=GenBank:WP_043143369.1;Name=WP_043143369.1;Ontology_term=GO:0009055,GO:0020037,GO:0046872;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006320291.1;locus_tag=IY40_RS22240;product=c-type cytochrome;protein_id=WP_043143369.1;transl_table=11 NZ_JPQY01000042.1 RefSeq gene 48212 49495 . + . ID=gene-IY40_RS22245;Name=IY40_RS22245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS22245;old_locus_tag=IY40_22655 NZ_JPQY01000042.1 Protein Homology CDS 48212 49495 . + 0 ID=cds-WP_043143391.1;Parent=gene-IY40_RS22245;Dbxref=GenBank:WP_043143391.1;Name=WP_043143391.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013812628.1;locus_tag=IY40_RS22245;product=SLC5/6 family protein;protein_id=WP_043143391.1;transl_table=11 NZ_JPQY01000042.1 RefSeq gene 49646 50779 . + . ID=gene-IY40_RS22250;Name=IY40_RS22250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS22250;old_locus_tag=IY40_22660 NZ_JPQY01000042.1 Protein Homology CDS 49646 50779 . + 0 ID=cds-WP_025302612.1;Parent=gene-IY40_RS22250;Dbxref=GenBank:WP_025302612.1;Name=WP_025302612.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006324898.1;locus_tag=IY40_RS22250;product=ABC transporter substrate-binding protein;protein_id=WP_025302612.1;transl_table=11 NZ_JPQY01000042.1 RefSeq gene 50817 51503 . - . ID=gene-IY40_RS22255;Name=IY40_RS22255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS22255;old_locus_tag=IY40_22665 NZ_JPQY01000042.1 Protein Homology CDS 50817 51503 . - 0 ID=cds-WP_025302613.1;Parent=gene-IY40_RS22255;Dbxref=GenBank:WP_025302613.1;Name=WP_025302613.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004931428.1;locus_tag=IY40_RS22255;product=MarC family NAAT transporter;protein_id=WP_025302613.1;transl_table=11 NZ_JPQY01000042.1 RefSeq gene 51611 51838 . - . ID=gene-IY40_RS26320;Name=IY40_RS26320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS26320 NZ_JPQY01000042.1 GeneMarkS-2+ CDS 51611 51838 . - 0 ID=cds-WP_025302614.1;Parent=gene-IY40_RS26320;Dbxref=GenBank:WP_025302614.1;Name=WP_025302614.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IY40_RS26320;product=hypothetical protein;protein_id=WP_025302614.1;transl_table=11 NZ_JPQY01000042.1 RefSeq gene 52062 53111 . + . ID=gene-IY40_RS22265;Name=IY40_RS22265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS22265;old_locus_tag=IY40_22675 NZ_JPQY01000042.1 Protein Homology CDS 52062 53111 . + 0 ID=cds-WP_043143370.1;Parent=gene-IY40_RS22265;Dbxref=GenBank:WP_043143370.1;Name=WP_043143370.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006708228.1;locus_tag=IY40_RS22265;product=AAA family ATPase;protein_id=WP_043143370.1;transl_table=11 NZ_JPQY01000042.1 RefSeq gene 53352 53975 . + . ID=gene-IY40_RS22270;Name=IY40_RS22270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS22270;old_locus_tag=IY40_22680 NZ_JPQY01000042.1 Protein Homology CDS 53352 53975 . + 0 ID=cds-WP_025302616.1;Parent=gene-IY40_RS22270;Dbxref=GenBank:WP_025302616.1;Name=WP_025302616.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016927968.1;locus_tag=IY40_RS22270;product=hypothetical protein;protein_id=WP_025302616.1;transl_table=11 NZ_JPQY01000042.1 RefSeq gene 54194 56122 . + . ID=gene-IY40_RS22275;Name=thrS;gbkey=Gene;gene=thrS;gene_biotype=protein_coding;locus_tag=IY40_RS22275;old_locus_tag=IY40_22685 NZ_JPQY01000042.1 Protein Homology CDS 54194 56122 . + 0 ID=cds-WP_004931421.1;Parent=gene-IY40_RS22275;Dbxref=GenBank:WP_004931421.1;Name=WP_004931421.1;Ontology_term=GO:0006435,GO:0004829,GO:0005524,GO:0005737;gbkey=CDS;gene=thrS;go_component=cytoplasm|0005737||IEA;go_function=threonine-tRNA ligase activity|0004829||IEA,ATP binding|0005524||IEA;go_process=threonyl-tRNA aminoacylation|0006435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006894721.1;locus_tag=IY40_RS22275;product=threonine--tRNA ligase;protein_id=WP_004931421.1;transl_table=11 NZ_JPQY01000042.1 RefSeq gene 56126 56677 . + . ID=gene-IY40_RS25550;Name=infC;gbkey=Gene;gene=infC;gene_biotype=protein_coding;locus_tag=IY40_RS25550 NZ_JPQY01000042.1 Protein Homology CDS 56126 56677 . + 0 ID=cds-WP_048233542.1;Parent=gene-IY40_RS25550;Dbxref=GenBank:WP_048233542.1;Name=WP_048233542.1;Ontology_term=GO:0006413,GO:0003743;gbkey=CDS;gene=infC;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310452.1;locus_tag=IY40_RS25550;product=translation initiation factor IF-3;protein_id=WP_048233542.1;transl_table=11 NZ_JPQY01000042.1 RefSeq gene 56776 56973 . + . ID=gene-IY40_RS22285;Name=rpmI;gbkey=Gene;gene=rpmI;gene_biotype=protein_coding;locus_tag=IY40_RS22285;old_locus_tag=IY40_22695 NZ_JPQY01000042.1 Protein Homology CDS 56776 56973 . + 0 ID=cds-WP_004931418.1;Parent=gene-IY40_RS22285;Dbxref=GenBank:WP_004931418.1;Name=WP_004931418.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmI;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006708231.1;locus_tag=IY40_RS22285;product=50S ribosomal protein L35;protein_id=WP_004931418.1;transl_table=11 NZ_JPQY01000042.1 RefSeq gene 57017 57373 . + . ID=gene-IY40_RS22290;Name=rplT;gbkey=Gene;gene=rplT;gene_biotype=protein_coding;locus_tag=IY40_RS22290;old_locus_tag=IY40_22700 NZ_JPQY01000042.1 Protein Homology CDS 57017 57373 . + 0 ID=cds-WP_004931417.1;Parent=gene-IY40_RS22290;Dbxref=GenBank:WP_004931417.1;Name=WP_004931417.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplT;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009635878.1;locus_tag=IY40_RS22290;product=50S ribosomal protein L20;protein_id=WP_004931417.1;transl_table=11 NZ_JPQY01000042.1 cmsearch sequence_feature 57487 57609 . + . ID=id-NZ_JPQY01000042.1:57487..57609;Dbxref=RFAM:RF01859;Note=Phe leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.5 NZ_JPQY01000042.1 RefSeq gene 57491 57535 . + . ID=gene-IY40_RS26420;Name=pheM;gbkey=Gene;gene=pheM;gene_biotype=protein_coding;locus_tag=IY40_RS26420 NZ_JPQY01000042.1 Protein Homology CDS 57491 57535 . + 0 ID=cds-WP_121626058.1;Parent=gene-IY40_RS26420;Dbxref=GenBank:WP_121626058.1;Name=WP_121626058.1;Ontology_term=GO:0031556;gbkey=CDS;gene=pheM;go_process=transcriptional attenuation by ribosome|0031556||IEA;inference=COORDINATES: protein motif:HMM:NF033686.1;locus_tag=IY40_RS26420;product=pheST operon leader peptide PheM;protein_id=WP_121626058.1;transl_table=11 NZ_JPQY01000042.1 RefSeq gene 57797 58780 . + . ID=gene-IY40_RS22295;Name=pheS;gbkey=Gene;gene=pheS;gene_biotype=protein_coding;locus_tag=IY40_RS22295;old_locus_tag=IY40_22705 NZ_JPQY01000042.1 Protein Homology CDS 57797 58780 . + 0 ID=cds-WP_043143373.1;Parent=gene-IY40_RS22295;Dbxref=GenBank:WP_043143373.1;Name=WP_043143373.1;Ontology_term=GO:0006432,GO:0000166,GO:0004826,GO:0005524,GO:0005737;gbkey=CDS;gene=pheS;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,phenylalanine-tRNA ligase activity|0004826||IEA,ATP binding|0005524||IEA;go_process=phenylalanyl-tRNA aminoacylation|0006432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004851795.1;locus_tag=IY40_RS22295;product=phenylalanine--tRNA ligase subunit alpha;protein_id=WP_043143373.1;transl_table=11 NZ_JPQY01000042.1 RefSeq gene 58795 61182 . + . ID=gene-IY40_RS22300;Name=pheT;gbkey=Gene;gene=pheT;gene_biotype=protein_coding;locus_tag=IY40_RS22300;old_locus_tag=IY40_22710 NZ_JPQY01000042.1 Protein Homology CDS 58795 61182 . + 0 ID=cds-WP_043143375.1;Parent=gene-IY40_RS22300;Dbxref=GenBank:WP_043143375.1;Name=WP_043143375.1;Ontology_term=GO:0006432,GO:0000287,GO:0004826,GO:0005524;gbkey=CDS;gene=pheT;go_function=magnesium ion binding|0000287||IEA,phenylalanine-tRNA ligase activity|0004826||IEA,ATP binding|0005524||IEA;go_process=phenylalanyl-tRNA aminoacylation|0006432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310447.1;locus_tag=IY40_RS22300;product=phenylalanine--tRNA ligase subunit beta;protein_id=WP_043143375.1;transl_table=11 NZ_JPQY01000042.1 RefSeq gene 61187 61483 . + . ID=gene-IY40_RS22305;Name=ihfA;gbkey=Gene;gene=ihfA;gene_biotype=protein_coding;locus_tag=IY40_RS22305;old_locus_tag=IY40_22715 NZ_JPQY01000042.1 Protein Homology CDS 61187 61483 . + 0 ID=cds-WP_004931414.1;Parent=gene-IY40_RS22305;Dbxref=GenBank:WP_004931414.1;Name=WP_004931414.1;Ontology_term=GO:0006310,GO:0006355,GO:0003677;gbkey=CDS;gene=ihfA;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004931414.1;locus_tag=IY40_RS22305;product=integration host factor subunit alpha;protein_id=WP_004931414.1;transl_table=11 NZ_JPQY01000042.1 RefSeq gene 62037 62471 . + . ID=gene-IY40_RS22310;Name=IY40_RS22310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS22310;old_locus_tag=IY40_22720 NZ_JPQY01000042.1 Protein Homology CDS 62037 62471 . + 0 ID=cds-WP_043143377.1;Parent=gene-IY40_RS22310;Dbxref=GenBank:WP_043143377.1;Name=WP_043143377.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004931413.1;locus_tag=IY40_RS22310;product=DUF2502 domain-containing protein;protein_id=WP_043143377.1;transl_table=11 NZ_JPQY01000042.1 RefSeq gene 62651 63658 . + . ID=gene-IY40_RS22315;Name=btuC;gbkey=Gene;gene=btuC;gene_biotype=protein_coding;locus_tag=IY40_RS22315;old_locus_tag=IY40_22725 NZ_JPQY01000042.1 Protein Homology CDS 62651 63658 . + 0 ID=cds-WP_025302620.1;Parent=gene-IY40_RS22315;Dbxref=GenBank:WP_025302620.1;Name=WP_025302620.1;Ontology_term=GO:0005524,GO:0022857;gbkey=CDS;gene=btuC;go_function=ATP binding|0005524||IEA,transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012144883.1;locus_tag=IY40_RS22315;product=vitamin B12 ABC transporter permease BtuC;protein_id=WP_025302620.1;transl_table=11 NZ_JPQY01000042.1 RefSeq gene 63704 64255 . + . ID=gene-IY40_RS22320;Name=IY40_RS22320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS22320;old_locus_tag=IY40_22730 NZ_JPQY01000042.1 Protein Homology CDS 63704 64255 . + 0 ID=cds-WP_025302621.1;Parent=gene-IY40_RS22320;Dbxref=GenBank:WP_025302621.1;Name=WP_025302621.1;Ontology_term=GO:0006979,GO:0004602;gbkey=CDS;go_function=glutathione peroxidase activity|0004602||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006324908.1;locus_tag=IY40_RS22320;product=glutathione peroxidase;protein_id=WP_025302621.1;transl_table=11 NZ_JPQY01000042.1 RefSeq gene 64261 65016 . + . ID=gene-IY40_RS22325;Name=btuD;gbkey=Gene;gene=btuD;gene_biotype=protein_coding;locus_tag=IY40_RS22325;old_locus_tag=IY40_22735 NZ_JPQY01000042.1 Protein Homology CDS 64261 65016 . + 0 ID=cds-WP_043143379.1;Parent=gene-IY40_RS22325;Dbxref=GenBank:WP_043143379.1;Name=WP_043143379.1;Ontology_term=GO:0015889,GO:0005524;gbkey=CDS;gene=btuD;go_function=ATP binding|0005524||IEA;go_process=cobalamin transport|0015889||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004943615.1;locus_tag=IY40_RS22325;product=vitamin B12 ABC transporter ATP-binding protein BtuD;protein_id=WP_043143379.1;transl_table=11 NZ_JPQY01000042.1 RefSeq gene 65414 66568 . + . ID=gene-IY40_RS22330;Name=arnB;gbkey=Gene;gene=arnB;gene_biotype=protein_coding;locus_tag=IY40_RS22330;old_locus_tag=IY40_22740 NZ_JPQY01000042.1 Protein Homology CDS 65414 66568 . + 0 ID=cds-WP_025302623.1;Parent=gene-IY40_RS22330;Dbxref=GenBank:WP_025302623.1;Name=WP_025302623.1;Ontology_term=GO:0008483;gbkey=CDS;gene=arnB;go_function=transaminase activity|0008483||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004874218.1;locus_tag=IY40_RS22330;product=UDP-4-amino-4-deoxy-L-arabinose aminotransferase;protein_id=WP_025302623.1;transl_table=11 NZ_JPQY01000042.1 RefSeq gene 66555 67535 . + . ID=gene-IY40_RS22335;Name=arnC;gbkey=Gene;gene=arnC;gene_biotype=protein_coding;locus_tag=IY40_RS22335;old_locus_tag=IY40_22745 NZ_JPQY01000042.1 Protein Homology CDS 66555 67535 . + 0 ID=cds-WP_025302624.1;Parent=gene-IY40_RS22335;Dbxref=GenBank:WP_025302624.1;Name=WP_025302624.1;Ontology_term=GO:0016780;gbkey=CDS;gene=arnC;go_function=phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013812640.1;locus_tag=IY40_RS22335;product=undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase;protein_id=WP_025302624.1;transl_table=11 NZ_JPQY01000042.1 RefSeq gene 67535 69517 . + . ID=gene-IY40_RS22340;Name=arnA;gbkey=Gene;gene=arnA;gene_biotype=protein_coding;locus_tag=IY40_RS22340;old_locus_tag=IY40_22750 NZ_JPQY01000042.1 Protein Homology CDS 67535 69517 . + 0 ID=cds-WP_043143392.1;Parent=gene-IY40_RS22340;Dbxref=GenBank:WP_043143392.1;Name=WP_043143392.1;Ontology_term=GO:0009058,GO:0016742;gbkey=CDS;gene=arnA;go_function=hydroxymethyl-%2C formyl- and related transferase activity|0016742||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017892634.1;locus_tag=IY40_RS22340;product=bifunctional UDP-4-amino-4-deoxy-L-arabinose formyltransferase/UDP-glucuronic acid oxidase ArnA;protein_id=WP_043143392.1;transl_table=11 NZ_JPQY01000042.1 RefSeq gene 69514 70419 . + . ID=gene-IY40_RS22345;Name=arnD;gbkey=Gene;gene=arnD;gene_biotype=protein_coding;locus_tag=IY40_RS22345;old_locus_tag=IY40_22755 NZ_JPQY01000042.1 Protein Homology CDS 69514 70419 . + 0 ID=cds-WP_043143382.1;Parent=gene-IY40_RS22345;Dbxref=GenBank:WP_043143382.1;Name=WP_043143382.1;Ontology_term=GO:0016810;gbkey=CDS;gene=arnD;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004931406.1;locus_tag=IY40_RS22345;product=4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase;protein_id=WP_043143382.1;transl_table=11 NZ_JPQY01000042.1 RefSeq gene 70416 72080 . + . ID=gene-IY40_RS22350;Name=arnT;gbkey=Gene;gene=arnT;gene_biotype=protein_coding;locus_tag=IY40_RS22350;old_locus_tag=IY40_22760 NZ_JPQY01000042.1 Protein Homology CDS 70416 72080 . + 0 ID=cds-WP_025302627.1;Parent=gene-IY40_RS22350;Dbxref=GenBank:WP_025302627.1;Name=WP_025302627.1;Ontology_term=GO:0006493,GO:0000030,GO:0016763,GO:0016020;gbkey=CDS;gene=arnT;go_component=membrane|0016020||IEA;go_function=mannosyltransferase activity|0000030||IEA,pentosyltransferase activity|0016763||IEA;go_process=protein O-linked glycosylation|0006493||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304019.1;locus_tag=IY40_RS22350;product=lipid IV(A) 4-amino-4-deoxy-L-arabinosyltransferase;protein_id=WP_025302627.1;transl_table=11 NZ_JPQY01000042.1 RefSeq gene 72077 72421 . + . ID=gene-IY40_RS22355;Name=arnE;gbkey=Gene;gene=arnE;gene_biotype=protein_coding;locus_tag=IY40_RS22355;old_locus_tag=IY40_22765 NZ_JPQY01000042.1 Protein Homology CDS 72077 72421 . + 0 ID=cds-WP_025302628.1;Parent=gene-IY40_RS22355;Dbxref=GenBank:WP_025302628.1;Name=WP_025302628.1;gbkey=CDS;gene=arnE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004931404.1;locus_tag=IY40_RS22355;product=4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE;protein_id=WP_025302628.1;transl_table=11 NZ_JPQY01000042.1 RefSeq gene 72418 72810 . + . ID=gene-IY40_RS22360;Name=arnF;gbkey=Gene;gene=arnF;gene_biotype=protein_coding;locus_tag=IY40_RS22360;old_locus_tag=IY40_22770 NZ_JPQY01000042.1 Protein Homology CDS 72418 72810 . + 0 ID=cds-WP_043143385.1;Parent=gene-IY40_RS22360;Dbxref=GenBank:WP_043143385.1;Name=WP_043143385.1;gbkey=CDS;gene=arnF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012144892.1;locus_tag=IY40_RS22360;product=4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF;protein_id=WP_043143385.1;transl_table=11 NZ_JPQY01000042.1 RefSeq gene 72987 73451 . + . ID=gene-IY40_RS22365;Name=IY40_RS22365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS22365;old_locus_tag=IY40_22775 NZ_JPQY01000042.1 Protein Homology CDS 72987 73451 . + 0 ID=cds-WP_016927954.1;Parent=gene-IY40_RS22365;Dbxref=GenBank:WP_016927954.1;Name=WP_016927954.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002216102.1;locus_tag=IY40_RS22365;product=NlpC/P60 family protein;protein_id=WP_016927954.1;transl_table=11 NZ_JPQY01000042.1 RefSeq gene 73511 74524 . + . ID=gene-IY40_RS22370;Name=IY40_RS22370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS22370;old_locus_tag=IY40_22780 NZ_JPQY01000042.1 Protein Homology CDS 73511 74524 . + 0 ID=cds-WP_043143387.1;Parent=gene-IY40_RS22370;Dbxref=GenBank:WP_043143387.1;Name=WP_043143387.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000209756.1;locus_tag=IY40_RS22370;product=lipoate--protein ligase A;protein_id=WP_043143387.1;transl_table=11 ##sequence-region NZ_JPQY01000043.1 1 17550 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=615 NZ_JPQY01000043.1 RefSeq region 1 17550 . + . ID=NZ_JPQY01000043.1:1..17550;Dbxref=taxon:615;collected-by=Mahloro H. Serepa%3B Vincent M. Gray;collection-date=2013-04-11;country=South Africa: North West Province;gbkey=Src;genome=genomic;identified-by=Mahloro H. Serepa%3B Vincent M. Gray;isolation-source=entomopathogenic nematode Oscheius sp. MCB living in soil;mol_type=genomic DNA;nat-host=Oscheius sp. MCB;strain=MCB NZ_JPQY01000043.1 RefSeq gene 516 1943 . - . ID=gene-IY40_RS22375;Name=phoA;gbkey=Gene;gene=phoA;gene_biotype=protein_coding;locus_tag=IY40_RS22375;old_locus_tag=IY40_22785 NZ_JPQY01000043.1 Protein Homology CDS 516 1943 . - 0 ID=cds-WP_025302119.1;Parent=gene-IY40_RS22375;Dbxref=GenBank:WP_025302119.1;Name=WP_025302119.1;Ontology_term=GO:0016791;gbkey=CDS;gene=phoA;go_function=phosphatase activity|0016791||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_046686693.1;locus_tag=IY40_RS22375;product=alkaline phosphatase;protein_id=WP_025302119.1;transl_table=11 NZ_JPQY01000043.1 RefSeq gene 2074 2781 . - . ID=gene-IY40_RS22380;Name=IY40_RS22380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS22380;old_locus_tag=IY40_22790 NZ_JPQY01000043.1 Protein Homology CDS 2074 2781 . - 0 ID=cds-WP_025302120.1;Parent=gene-IY40_RS22380;Dbxref=GenBank:WP_025302120.1;Name=WP_025302120.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019454451.1;locus_tag=IY40_RS22380;product=glutathione S-transferase N-terminal domain-containing protein;protein_id=WP_025302120.1;transl_table=11 NZ_JPQY01000043.1 RefSeq gene 2856 3539 . - . ID=gene-IY40_RS22385;Name=IY40_RS22385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS22385;old_locus_tag=IY40_22795 NZ_JPQY01000043.1 Protein Homology CDS 2856 3539 . - 0 ID=cds-WP_043143395.1;Parent=gene-IY40_RS22385;Dbxref=GenBank:WP_043143395.1;Name=WP_043143395.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004939062.1;locus_tag=IY40_RS22385;product=ArsR/SmtB family transcription factor;protein_id=WP_043143395.1;transl_table=11 NZ_JPQY01000043.1 RefSeq gene 3714 4061 . + . ID=gene-IY40_RS22390;Name=IY40_RS22390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS22390;old_locus_tag=IY40_22800 NZ_JPQY01000043.1 Protein Homology CDS 3714 4061 . + 0 ID=cds-WP_025302122.1;Parent=gene-IY40_RS22390;Dbxref=GenBank:WP_025302122.1;Name=WP_025302122.1;Ontology_term=GO:0017000,GO:0004497,GO:0016491;gbkey=CDS;go_function=monooxygenase activity|0004497||IEA,oxidoreductase activity|0016491||IEA;go_process=antibiotic biosynthetic process|0017000||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019454448.1;locus_tag=IY40_RS22390;product=antibiotic biosynthesis monooxygenase family protein;protein_id=WP_025302122.1;transl_table=11 NZ_JPQY01000043.1 RefSeq gene 4094 4825 . - . ID=gene-IY40_RS22395;Name=IY40_RS22395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS22395;old_locus_tag=IY40_22805 NZ_JPQY01000043.1 Protein Homology CDS 4094 4825 . - 0 ID=cds-WP_025302123.1;Parent=gene-IY40_RS22395;Dbxref=GenBank:WP_025302123.1;Name=WP_025302123.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015377190.1;locus_tag=IY40_RS22395;product=isochorismatase family protein;protein_id=WP_025302123.1;transl_table=11 NZ_JPQY01000043.1 RefSeq gene 4958 5854 . + . ID=gene-IY40_RS22400;Name=IY40_RS22400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS22400;old_locus_tag=IY40_22810 NZ_JPQY01000043.1 Protein Homology CDS 4958 5854 . + 0 ID=cds-WP_043143397.1;Parent=gene-IY40_RS22400;Dbxref=GenBank:WP_043143397.1;Name=WP_043143397.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015377191.1;locus_tag=IY40_RS22400;product=LysR family transcriptional regulator;protein_id=WP_043143397.1;transl_table=11 NZ_JPQY01000043.1 RefSeq gene 6023 6520 . + . ID=gene-IY40_RS22405;Name=IY40_RS22405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS22405;old_locus_tag=IY40_22815 NZ_JPQY01000043.1 Protein Homology CDS 6023 6520 . + 0 ID=cds-WP_043143398.1;Parent=gene-IY40_RS22405;Dbxref=GenBank:WP_043143398.1;Name=WP_043143398.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004939036.1;locus_tag=IY40_RS22405;product=AAA family ATPase;protein_id=WP_043143398.1;transl_table=11 NZ_JPQY01000043.1 RefSeq gene 6553 7059 . - . ID=gene-IY40_RS22410;Name=IY40_RS22410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS22410;old_locus_tag=IY40_22820 NZ_JPQY01000043.1 Protein Homology CDS 6553 7059 . - 0 ID=cds-WP_043143402.1;Parent=gene-IY40_RS22410;Dbxref=GenBank:WP_043143402.1;Name=WP_043143402.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015377193.1;locus_tag=IY40_RS22410;product=GNAT family N-acetyltransferase;protein_id=WP_043143402.1;transl_table=11 NZ_JPQY01000043.1 RefSeq gene 7122 7379 . - . ID=gene-IY40_RS22415;Name=IY40_RS22415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS22415;old_locus_tag=IY40_22825 NZ_JPQY01000043.1 Protein Homology CDS 7122 7379 . - 0 ID=cds-WP_004939031.1;Parent=gene-IY40_RS22415;Dbxref=GenBank:WP_004939031.1;Name=WP_004939031.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015585268.1;locus_tag=IY40_RS22415;product=YjhX family toxin;protein_id=WP_004939031.1;transl_table=11 NZ_JPQY01000043.1 RefSeq gene 7613 8083 . - . ID=gene-IY40_RS22420;Name=cynS;gbkey=Gene;gene=cynS;gene_biotype=protein_coding;locus_tag=IY40_RS22420;old_locus_tag=IY40_22830 NZ_JPQY01000043.1 Protein Homology CDS 7613 8083 . - 0 ID=cds-WP_043143404.1;Parent=gene-IY40_RS22420;Dbxref=GenBank:WP_043143404.1;Name=WP_043143404.1;Ontology_term=GO:0006082,GO:0008824;gbkey=CDS;gene=cynS;go_function=cyanate hydratase activity|0008824||IEA;go_process=organic acid metabolic process|0006082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012005966.1;locus_tag=IY40_RS22420;product=cyanase;protein_id=WP_043143404.1;transl_table=11 NZ_JPQY01000043.1 RefSeq gene 8103 8756 . - . ID=gene-IY40_RS22425;Name=IY40_RS22425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS22425;old_locus_tag=IY40_22835 NZ_JPQY01000043.1 Protein Homology CDS 8103 8756 . - 0 ID=cds-WP_043143406.1;Parent=gene-IY40_RS22425;Dbxref=GenBank:WP_043143406.1;Name=WP_043143406.1;Ontology_term=GO:0004089,GO:0008270;gbkey=CDS;go_function=carbonate dehydratase activity|0004089||IEA,zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004939026.1;locus_tag=IY40_RS22425;product=carbonic anhydrase;protein_id=WP_043143406.1;transl_table=11 NZ_JPQY01000043.1 RefSeq gene 8871 9821 . + . ID=gene-IY40_RS22430;Name=cynR;gbkey=Gene;gene=cynR;gene_biotype=protein_coding;locus_tag=IY40_RS22430;old_locus_tag=IY40_22840 NZ_JPQY01000043.1 Protein Homology CDS 8871 9821 . + 0 ID=cds-WP_043143408.1;Parent=gene-IY40_RS22430;Dbxref=GenBank:WP_043143408.1;Name=WP_043143408.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=cynR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004939023.1;locus_tag=IY40_RS22430;product=transcriptional regulator CynR;protein_id=WP_043143408.1;transl_table=11 NZ_JPQY01000043.1 RefSeq gene 9745 10176 . - . ID=gene-IY40_RS22435;Name=IY40_RS22435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS22435;old_locus_tag=IY40_22845 NZ_JPQY01000043.1 Protein Homology CDS 9745 10176 . - 0 ID=cds-WP_043143410.1;Parent=gene-IY40_RS22435;Dbxref=GenBank:WP_043143410.1;Name=WP_043143410.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004939020.1;locus_tag=IY40_RS22435;product=hypothetical protein;protein_id=WP_043143410.1;transl_table=11 NZ_JPQY01000043.1 RefSeq gene 10268 11179 . + . ID=gene-IY40_RS22440;Name=IY40_RS22440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS22440;old_locus_tag=IY40_22850 NZ_JPQY01000043.1 Protein Homology CDS 10268 11179 . + 0 ID=cds-WP_043143412.1;Parent=gene-IY40_RS22440;Dbxref=GenBank:WP_043143412.1;Name=WP_043143412.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: protein motif:HMM:NF012546.6;locus_tag=IY40_RS22440;product=alpha/beta hydrolase family protein;protein_id=WP_043143412.1;transl_table=11 NZ_JPQY01000043.1 RefSeq gene 11266 11481 . - . ID=gene-IY40_RS22445;Name=IY40_RS22445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS22445;old_locus_tag=IY40_22855 NZ_JPQY01000043.1 Protein Homology CDS 11266 11481 . - 0 ID=cds-WP_025302132.1;Parent=gene-IY40_RS22445;Dbxref=GenBank:WP_025302132.1;Name=WP_025302132.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019454437.1;locus_tag=IY40_RS22445;product=hypothetical protein;protein_id=WP_025302132.1;transl_table=11 NZ_JPQY01000043.1 RefSeq gene 11478 12122 . - . ID=gene-IY40_RS22450;Name=IY40_RS22450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS22450;old_locus_tag=IY40_22860 NZ_JPQY01000043.1 Protein Homology CDS 11478 12122 . - 0 ID=cds-WP_043143414.1;Parent=gene-IY40_RS22450;Dbxref=GenBank:WP_043143414.1;Name=WP_043143414.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019454436.1;locus_tag=IY40_RS22450;product=hypothetical protein;protein_id=WP_043143414.1;transl_table=11 NZ_JPQY01000043.1 RefSeq gene 12304 13896 . + . ID=gene-IY40_RS22455;Name=IY40_RS22455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS22455;old_locus_tag=IY40_22865 NZ_JPQY01000043.1 Protein Homology CDS 12304 13896 . + 0 ID=cds-WP_025302134.1;Parent=gene-IY40_RS22455;Dbxref=GenBank:WP_025302134.1;Name=WP_025302134.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004942319.1;locus_tag=IY40_RS22455;product=ABC-F family ATPase;protein_id=WP_025302134.1;transl_table=11 NZ_JPQY01000043.1 RefSeq gene 13948 14703 . - . ID=gene-IY40_RS22460;Name=moeB;gbkey=Gene;gene=moeB;gene_biotype=protein_coding;locus_tag=IY40_RS22460;old_locus_tag=IY40_22870 NZ_JPQY01000043.1 Protein Homology CDS 13948 14703 . - 0 ID=cds-WP_043143416.1;Parent=gene-IY40_RS22460;Dbxref=GenBank:WP_043143416.1;Name=WP_043143416.1;Ontology_term=GO:0006777,GO:0008641;gbkey=CDS;gene=moeB;go_function=ubiquitin-like modifier activating enzyme activity|0008641||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004939002.1;locus_tag=IY40_RS22460;product=molybdopterin-synthase adenylyltransferase MoeB;protein_id=WP_043143416.1;transl_table=11 NZ_JPQY01000043.1 RefSeq gene 14706 15944 . - . ID=gene-IY40_RS22465;Name=moeA;gbkey=Gene;gene=moeA;gene_biotype=protein_coding;locus_tag=IY40_RS22465;old_locus_tag=IY40_22875 NZ_JPQY01000043.1 Protein Homology CDS 14706 15944 . - 0 ID=cds-WP_043143418.1;Parent=gene-IY40_RS22465;Dbxref=GenBank:WP_043143418.1;Name=WP_043143418.1;Ontology_term=GO:0006777,GO:0032324;gbkey=CDS;gene=moeA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA,molybdopterin cofactor biosynthetic process|0032324||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006322161.1;locus_tag=IY40_RS22465;product=molybdopterin molybdotransferase MoeA;protein_id=WP_043143418.1;transl_table=11 NZ_JPQY01000043.1 RefSeq gene 16102 16638 . + . ID=gene-IY40_RS22470;Name=IY40_RS22470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS22470;old_locus_tag=IY40_22880 NZ_JPQY01000043.1 Protein Homology CDS 16102 16638 . + 0 ID=cds-WP_038629078.1;Parent=gene-IY40_RS22470;Dbxref=GenBank:WP_038629078.1;Name=WP_038629078.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006324382.1;locus_tag=IY40_RS22470;product=DUF924 family protein;protein_id=WP_038629078.1;transl_table=11 NZ_JPQY01000043.1 RefSeq gene 16995 17550 . + . ID=gene-IY40_RS22475;Name=IY40_RS22475;end_range=17550,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS22475;old_locus_tag=IY40_22885;partial=true NZ_JPQY01000043.1 Protein Homology CDS 16995 17550 . + 0 ID=cds-WP_043143420.1;Parent=gene-IY40_RS22475;Dbxref=GenBank:WP_043143420.1;Name=WP_043143420.1;Ontology_term=GO:0006508,GO:0004067,GO:0008798;end_range=17550,.;gbkey=CDS;go_function=asparaginase activity|0004067||IEA,beta-aspartyl-peptidase activity|0008798||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004938998.1;locus_tag=IY40_RS22475;partial=true;product=isoaspartyl peptidase/L-asparaginase family protein;protein_id=WP_043143420.1;transl_table=11 ##sequence-region NZ_JPQY01000044.1 1 3193 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=615 NZ_JPQY01000044.1 RefSeq region 1 3193 . + . ID=NZ_JPQY01000044.1:1..3193;Dbxref=taxon:615;collected-by=Mahloro H. Serepa%3B Vincent M. Gray;collection-date=2013-04-11;country=South Africa: North West Province;gbkey=Src;genome=genomic;identified-by=Mahloro H. Serepa%3B Vincent M. Gray;isolation-source=entomopathogenic nematode Oscheius sp. MCB living in soil;mol_type=genomic DNA;nat-host=Oscheius sp. MCB;strain=MCB NZ_JPQY01000044.1 RefSeq gene 125 1567 . - . ID=gene-IY40_RS22480;Name=IY40_RS22480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS22480;old_locus_tag=IY40_22890 NZ_JPQY01000044.1 Protein Homology CDS 125 1567 . - 0 ID=cds-WP_025302632.1;Parent=gene-IY40_RS22480;Dbxref=GenBank:WP_025302632.1;Name=WP_025302632.1;Ontology_term=GO:0000287,GO:0005524,GO:0070733;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,ATP binding|0005524||IEA,AMPylase activity|0070733||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019456015.1;locus_tag=IY40_RS22480;product=protein adenylyltransferase SelO;protein_id=WP_025302632.1;transl_table=11 NZ_JPQY01000044.1 RefSeq gene 1825 2556 . - . ID=gene-IY40_RS22485;Name=IY40_RS22485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS22485;old_locus_tag=IY40_22895 NZ_JPQY01000044.1 Protein Homology CDS 1825 2556 . - 0 ID=cds-WP_043143424.1;Parent=gene-IY40_RS22485;Dbxref=GenBank:WP_043143424.1;Name=WP_043143424.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019456016.1;locus_tag=IY40_RS22485;product=EAL domain-containing protein;protein_id=WP_043143424.1;transl_table=11 NZ_JPQY01000044.1 RefSeq pseudogene 3069 3193 . - . ID=gene-IY40_RS26660;Name=lplA;end_range=3193,.;gbkey=Gene;gene=lplA;gene_biotype=pseudogene;locus_tag=IY40_RS26660;partial=true;pseudo=true NZ_JPQY01000044.1 Protein Homology CDS 3069 3193 . - 2 ID=cds-IY40_RS26660;Parent=gene-IY40_RS26660;Note=Catalyzes both the ATP-dependent activation of exogenously supplied lipoate to lipoyl-AMP and the transfer of the activated lipoyl on the lipoate-dependent enzymes. Creates an amide linkage that joins the free carboxyl group of lipoic acid to the epsilon-amino group of a specific lysine residue in lipoyl domain of apoproteins%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=3193,.;gbkey=CDS;gene=lplA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015377706.1;locus_tag=IY40_RS26660;partial=true;product=lipoate--protein ligase LplA;pseudo=true;transl_table=11 ##sequence-region NZ_JPQY01000045.1 1 5146 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=615 NZ_JPQY01000045.1 RefSeq region 1 5146 . + . ID=NZ_JPQY01000045.1:1..5146;Dbxref=taxon:615;collected-by=Mahloro H. Serepa%3B Vincent M. Gray;collection-date=2013-04-11;country=South Africa: North West Province;gbkey=Src;genome=genomic;identified-by=Mahloro H. Serepa%3B Vincent M. Gray;isolation-source=entomopathogenic nematode Oscheius sp. MCB living in soil;mol_type=genomic DNA;nat-host=Oscheius sp. MCB;strain=MCB NZ_JPQY01000045.1 RefSeq gene 84 1625 . + . ID=gene-IY40_RS22490;Name=IY40_RS22490;gbkey=Gene;gene_biotype=rRNA;locus_tag=IY40_RS22490;old_locus_tag=IY40_22905 NZ_JPQY01000045.1 cmsearch rRNA 84 1625 . + . ID=rna-IY40_RS22490;Parent=gene-IY40_RS22490;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=IY40_RS22490;product=16S ribosomal RNA NZ_JPQY01000045.1 cmsearch exon 84 1625 . + . ID=exon-IY40_RS22490-1;Parent=rna-IY40_RS22490;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=IY40_RS22490;product=16S ribosomal RNA NZ_JPQY01000045.1 RefSeq gene 1766 1841 . + . ID=gene-IY40_RS22495;Name=IY40_RS22495;gbkey=Gene;gene_biotype=tRNA;locus_tag=IY40_RS22495;old_locus_tag=IY40_22910 NZ_JPQY01000045.1 tRNAscan-SE tRNA 1766 1841 . + . ID=rna-IY40_RS22495;Parent=gene-IY40_RS22495;anticodon=(pos:1800..1802);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=IY40_RS22495;product=tRNA-Glu NZ_JPQY01000045.1 tRNAscan-SE exon 1766 1841 . + . ID=exon-IY40_RS22495-1;Parent=rna-IY40_RS22495;anticodon=(pos:1800..1802);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=IY40_RS22495;product=tRNA-Glu NZ_JPQY01000045.1 RefSeq gene 2076 4983 . + . ID=gene-IY40_RS22500;Name=IY40_RS22500;gbkey=Gene;gene_biotype=rRNA;locus_tag=IY40_RS22500;old_locus_tag=IY40_22915 NZ_JPQY01000045.1 cmsearch rRNA 2076 4983 . + . ID=rna-IY40_RS22500;Parent=gene-IY40_RS22500;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=IY40_RS22500;product=23S ribosomal RNA NZ_JPQY01000045.1 cmsearch exon 2076 4983 . + . ID=exon-IY40_RS22500-1;Parent=rna-IY40_RS22500;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=IY40_RS22500;product=23S ribosomal RNA ##sequence-region NZ_JPQY01000046.1 1 99756 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=615 NZ_JPQY01000046.1 RefSeq region 1 99756 . + . ID=NZ_JPQY01000046.1:1..99756;Dbxref=taxon:615;collected-by=Mahloro H. Serepa%3B Vincent M. Gray;collection-date=2013-04-11;country=South Africa: North West Province;gbkey=Src;genome=genomic;identified-by=Mahloro H. Serepa%3B Vincent M. Gray;isolation-source=entomopathogenic nematode Oscheius sp. MCB living in soil;mol_type=genomic DNA;nat-host=Oscheius sp. MCB;strain=MCB NZ_JPQY01000046.1 RefSeq gene 321 1226 . - . ID=gene-IY40_RS22505;Name=IY40_RS22505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS22505;old_locus_tag=IY40_22920 NZ_JPQY01000046.1 Protein Homology CDS 321 1226 . - 0 ID=cds-WP_025302958.1;Parent=gene-IY40_RS22505;Dbxref=GenBank:WP_025302958.1;Name=WP_025302958.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016927597.1;locus_tag=IY40_RS22505;product=ROK family protein;protein_id=WP_025302958.1;transl_table=11 NZ_JPQY01000046.1 RefSeq gene 1245 2528 . - . ID=gene-IY40_RS22510;Name=IY40_RS22510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS22510;old_locus_tag=IY40_22925 NZ_JPQY01000046.1 Protein Homology CDS 1245 2528 . - 0 ID=cds-WP_043143427.1;Parent=gene-IY40_RS22510;Dbxref=GenBank:WP_043143427.1;Name=WP_043143427.1;Ontology_term=GO:0000166,GO:0003824;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017892965.1;locus_tag=IY40_RS22510;product=Gfo/Idh/MocA family protein;protein_id=WP_043143427.1;transl_table=11 NZ_JPQY01000046.1 RefSeq gene 2548 3660 . - . ID=gene-IY40_RS22515;Name=IY40_RS22515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS22515;old_locus_tag=IY40_22930 NZ_JPQY01000046.1 Protein Homology CDS 2548 3660 . - 0 ID=cds-WP_043143428.1;Parent=gene-IY40_RS22515;Dbxref=GenBank:WP_043143428.1;Name=WP_043143428.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017892964.1;locus_tag=IY40_RS22515;product=ABC transporter ATP-binding protein;protein_id=WP_043143428.1;transl_table=11 NZ_JPQY01000046.1 RefSeq gene 3682 4500 . - . ID=gene-IY40_RS22520;Name=IY40_RS22520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS22520;old_locus_tag=IY40_22935 NZ_JPQY01000046.1 Protein Homology CDS 3682 4500 . - 0 ID=cds-WP_043143429.1;Parent=gene-IY40_RS22520;Dbxref=GenBank:WP_043143429.1;Name=WP_043143429.1;Ontology_term=GO:0008643,GO:0055085;gbkey=CDS;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016927600.1;locus_tag=IY40_RS22520;product=carbohydrate ABC transporter permease;protein_id=WP_043143429.1;transl_table=11 NZ_JPQY01000046.1 RefSeq gene 4511 5452 . - . ID=gene-IY40_RS22525;Name=IY40_RS22525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS22525;old_locus_tag=IY40_22940 NZ_JPQY01000046.1 Protein Homology CDS 4511 5452 . - 0 ID=cds-WP_025302955.1;Parent=gene-IY40_RS22525;Dbxref=GenBank:WP_025302955.1;Name=WP_025302955.1;Ontology_term=GO:0008643,GO:0055085,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004938248.1;locus_tag=IY40_RS22525;product=carbohydrate ABC transporter permease;protein_id=WP_025302955.1;transl_table=11 NZ_JPQY01000046.1 RefSeq gene 5531 6784 . - . ID=gene-IY40_RS22530;Name=IY40_RS22530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS22530;old_locus_tag=IY40_22945 NZ_JPQY01000046.1 Protein Homology CDS 5531 6784 . - 0 ID=cds-WP_043143430.1;Parent=gene-IY40_RS22530;Dbxref=GenBank:WP_043143430.1;Name=WP_043143430.1;Ontology_term=GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017892961.1;locus_tag=IY40_RS22530;product=ABC transporter substrate-binding protein;protein_id=WP_043143430.1;transl_table=11 NZ_JPQY01000046.1 RefSeq gene 7251 8921 . + . ID=gene-IY40_RS22535;Name=IY40_RS22535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS22535;old_locus_tag=IY40_22950 NZ_JPQY01000046.1 Protein Homology CDS 7251 8921 . + 0 ID=cds-WP_043143431.1;Parent=gene-IY40_RS22535;Dbxref=GenBank:WP_043143431.1;Name=WP_043143431.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004938238.1;locus_tag=IY40_RS22535;product=DUF4091 domain-containing protein;protein_id=WP_043143431.1;transl_table=11 NZ_JPQY01000046.1 RefSeq gene 9077 10798 . + . ID=gene-IY40_RS22540;Name=olsF;gbkey=Gene;gene=olsF;gene_biotype=protein_coding;locus_tag=IY40_RS22540;old_locus_tag=IY40_22955 NZ_JPQY01000046.1 Protein Homology CDS 9077 10798 . + 0 ID=cds-WP_043143432.1;Parent=gene-IY40_RS22540;Dbxref=GenBank:WP_043143432.1;Name=WP_043143432.1;gbkey=CDS;gene=olsF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016927604.1;locus_tag=IY40_RS22540;product=ornithine lipid synthase OlsF;protein_id=WP_043143432.1;transl_table=11 NZ_JPQY01000046.1 RefSeq gene 10900 11682 . + . ID=gene-IY40_RS22545;Name=IY40_RS22545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS22545;old_locus_tag=IY40_22960 NZ_JPQY01000046.1 Protein Homology CDS 10900 11682 . + 0 ID=cds-WP_025302951.1;Parent=gene-IY40_RS22545;Dbxref=GenBank:WP_025302951.1;Name=WP_025302951.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015377972.1;locus_tag=IY40_RS22545;product=N-formylglutamate amidohydrolase;protein_id=WP_025302951.1;transl_table=11 NZ_JPQY01000046.1 RefSeq gene 11759 12472 . + . ID=gene-IY40_RS22550;Name=IY40_RS22550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS22550;old_locus_tag=IY40_22965 NZ_JPQY01000046.1 Protein Homology CDS 11759 12472 . + 0 ID=cds-WP_025302950.1;Parent=gene-IY40_RS22550;Dbxref=GenBank:WP_025302950.1;Name=WP_025302950.1;Ontology_term=GO:0035438;gbkey=CDS;go_function=cyclic-di-GMP binding|0035438||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012145295.1;locus_tag=IY40_RS22550;product=flagellar brake protein;protein_id=WP_025302950.1;transl_table=11 NZ_JPQY01000046.1 RefSeq gene 12516 13358 . - . ID=gene-IY40_RS22555;Name=pdxY;gbkey=Gene;gene=pdxY;gene_biotype=protein_coding;locus_tag=IY40_RS22555;old_locus_tag=IY40_22970 NZ_JPQY01000046.1 Protein Homology CDS 12516 13358 . - 0 ID=cds-WP_025302949.1;Parent=gene-IY40_RS22555;Dbxref=GenBank:WP_025302949.1;Name=WP_025302949.1;Ontology_term=GO:0009443,GO:0008478;gbkey=CDS;gene=pdxY;go_function=pyridoxal kinase activity|0008478||IEA;go_process=pyridoxal 5'-phosphate salvage|0009443||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016927606.1;locus_tag=IY40_RS22555;product=pyridoxal kinase;protein_id=WP_025302949.1;transl_table=11 NZ_JPQY01000046.1 RefSeq gene 13362 14078 . - . ID=gene-IY40_RS22560;Name=IY40_RS22560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS22560;old_locus_tag=IY40_22975 NZ_JPQY01000046.1 Protein Homology CDS 13362 14078 . - 0 ID=cds-WP_043143441.1;Parent=gene-IY40_RS22560;Dbxref=GenBank:WP_043143441.1;Name=WP_043143441.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016927607.1;locus_tag=IY40_RS22560;product=glutamine amidotransferase;protein_id=WP_043143441.1;transl_table=11 NZ_JPQY01000046.1 RefSeq gene 14075 14329 . - . ID=gene-IY40_RS22565;Name=IY40_RS22565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS22565;old_locus_tag=IY40_22980 NZ_JPQY01000046.1 Protein Homology CDS 14075 14329 . - 0 ID=cds-WP_025302947.1;Parent=gene-IY40_RS22565;Dbxref=GenBank:WP_025302947.1;Name=WP_025302947.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016927608.1;locus_tag=IY40_RS22565;product=hypothetical protein;protein_id=WP_025302947.1;transl_table=11 NZ_JPQY01000046.1 RefSeq gene 14396 15700 . + . ID=gene-IY40_RS22570;Name=IY40_RS22570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS22570;old_locus_tag=IY40_22985 NZ_JPQY01000046.1 Protein Homology CDS 14396 15700 . + 0 ID=cds-WP_043143443.1;Parent=gene-IY40_RS22570;Dbxref=GenBank:WP_043143443.1;Name=WP_043143443.1;Ontology_term=GO:0009058,GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016927609.1;locus_tag=IY40_RS22570;product=aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme;protein_id=WP_043143443.1;transl_table=11 NZ_JPQY01000046.1 RefSeq gene 15697 16683 . - . ID=gene-IY40_RS22575;Name=IY40_RS22575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS22575;old_locus_tag=IY40_22990 NZ_JPQY01000046.1 Protein Homology CDS 15697 16683 . - 0 ID=cds-WP_043143445.1;Parent=gene-IY40_RS22575;Dbxref=GenBank:WP_043143445.1;Name=WP_043143445.1;Ontology_term=GO:0010181,GO:0016491;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013813069.1;locus_tag=IY40_RS22575;product=MsnO8 family LLM class oxidoreductase;protein_id=WP_043143445.1;transl_table=11 NZ_JPQY01000046.1 RefSeq gene 16822 17658 . - . ID=gene-IY40_RS22580;Name=pbpG;gbkey=Gene;gene=pbpG;gene_biotype=protein_coding;locus_tag=IY40_RS22580;old_locus_tag=IY40_22995 NZ_JPQY01000046.1 Protein Homology CDS 16822 17658 . - 0 ID=cds-WP_043143447.1;Parent=gene-IY40_RS22580;Dbxref=GenBank:WP_043143447.1;Name=WP_043143447.1;Ontology_term=GO:0006508,GO:0009002;gbkey=CDS;gene=pbpG;go_function=serine-type D-Ala-D-Ala carboxypeptidase activity|0009002||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016927611.1;locus_tag=IY40_RS22580;product=D-alanyl-D-alanine endopeptidase;protein_id=WP_043143447.1;transl_table=11 NZ_JPQY01000046.1 RefSeq gene 17752 18177 . - . ID=gene-IY40_RS22585;Name=nudI;gbkey=Gene;gene=nudI;gene_biotype=protein_coding;locus_tag=IY40_RS22585;old_locus_tag=IY40_23000 NZ_JPQY01000046.1 Protein Homology CDS 17752 18177 . - 0 ID=cds-WP_043143449.1;Parent=gene-IY40_RS22585;Dbxref=GenBank:WP_043143449.1;Name=WP_043143449.1;Ontology_term=GO:0016818;gbkey=CDS;gene=nudI;go_function=hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461237.1;locus_tag=IY40_RS22585;product=nucleoside triphosphatase NudI;protein_id=WP_043143449.1;transl_table=11 NZ_JPQY01000046.1 RefSeq gene 18298 19212 . - . ID=gene-IY40_RS22590;Name=ppk2;gbkey=Gene;gene=ppk2;gene_biotype=protein_coding;locus_tag=IY40_RS22590;old_locus_tag=IY40_23005 NZ_JPQY01000046.1 Protein Homology CDS 18298 19212 . - 0 ID=cds-WP_025302942.1;Parent=gene-IY40_RS22590;Dbxref=GenBank:WP_025302942.1;Name=WP_025302942.1;Ontology_term=GO:0006793,GO:0008976;gbkey=CDS;gene=ppk2;go_function=polyphosphate kinase activity|0008976||IEA;go_process=phosphorus metabolic process|0006793||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012145288.1;locus_tag=IY40_RS22590;product=polyphosphate kinase 2;protein_id=WP_025302942.1;transl_table=11 NZ_JPQY01000046.1 RefSeq gene 19239 20849 . - . ID=gene-IY40_RS22595;Name=IY40_RS22595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS22595;old_locus_tag=IY40_23010 NZ_JPQY01000046.1 Protein Homology CDS 19239 20849 . - 0 ID=cds-WP_025302941.1;Parent=gene-IY40_RS22595;Dbxref=GenBank:WP_025302941.1;Name=WP_025302941.1;Ontology_term=GO:0006817,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=phosphate ion transport|0006817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012145287.1;locus_tag=IY40_RS22595;product=inorganic phosphate transporter;protein_id=WP_025302941.1;transl_table=11 NZ_JPQY01000046.1 RefSeq gene 21036 22064 . + . ID=gene-IY40_RS22600;Name=IY40_RS22600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS22600;old_locus_tag=IY40_23015 NZ_JPQY01000046.1 Protein Homology CDS 21036 22064 . + 0 ID=cds-WP_043143451.1;Parent=gene-IY40_RS22600;Dbxref=GenBank:WP_043143451.1;Name=WP_043143451.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016927615.1;locus_tag=IY40_RS22600;product=transporter;protein_id=WP_043143451.1;transl_table=11 NZ_JPQY01000046.1 RefSeq gene 22065 22598 . - . ID=gene-IY40_RS22605;Name=IY40_RS22605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS22605;old_locus_tag=IY40_23020 NZ_JPQY01000046.1 Protein Homology CDS 22065 22598 . - 0 ID=cds-WP_043143453.1;Parent=gene-IY40_RS22605;Dbxref=GenBank:WP_043143453.1;Name=WP_043143453.1;Ontology_term=GO:0005488;gbkey=CDS;go_function=binding|0005488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006325591.1;locus_tag=IY40_RS22605;product=SRPBCC family protein;protein_id=WP_043143453.1;transl_table=11 NZ_JPQY01000046.1 RefSeq gene 22602 22949 . - . ID=gene-IY40_RS22610;Name=IY40_RS22610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS22610;old_locus_tag=IY40_23025 NZ_JPQY01000046.1 Protein Homology CDS 22602 22949 . - 0 ID=cds-WP_004938187.1;Parent=gene-IY40_RS22610;Dbxref=GenBank:WP_004938187.1;Name=WP_004938187.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012145284.1;locus_tag=IY40_RS22610;product=ArsR/SmtB family transcription factor;protein_id=WP_004938187.1;transl_table=11 NZ_JPQY01000046.1 RefSeq gene 23033 24259 . - . ID=gene-IY40_RS22615;Name=IY40_RS22615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS22615;old_locus_tag=IY40_23030 NZ_JPQY01000046.1 Protein Homology CDS 23033 24259 . - 0 ID=cds-WP_043143455.1;Parent=gene-IY40_RS22615;Dbxref=GenBank:WP_043143455.1;Name=WP_043143455.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015377961.1;locus_tag=IY40_RS22615;product=Zn-dependent hydrolase;protein_id=WP_043143455.1;transl_table=11 NZ_JPQY01000046.1 RefSeq gene 24256 24747 . - . ID=gene-IY40_RS22620;Name=IY40_RS22620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS22620;old_locus_tag=IY40_23035 NZ_JPQY01000046.1 Protein Homology CDS 24256 24747 . - 0 ID=cds-WP_043143456.1;Parent=gene-IY40_RS22620;Dbxref=GenBank:WP_043143456.1;Name=WP_043143456.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013813062.1;locus_tag=IY40_RS22620;product=L-2-amino-thiazoline-4-carboxylic acid hydrolase;protein_id=WP_043143456.1;transl_table=11 NZ_JPQY01000046.1 RefSeq gene 24766 25875 . - . ID=gene-IY40_RS22625;Name=IY40_RS22625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS22625;old_locus_tag=IY40_23040 NZ_JPQY01000046.1 Protein Homology CDS 24766 25875 . - 0 ID=cds-WP_407863475.1;Parent=gene-IY40_RS22625;Dbxref=GenBank:WP_407863475.1;Name=WP_407863475.1;Ontology_term=GO:0015803,GO:0055085,GO:0015658,GO:0022857,GO:0140359;gbkey=CDS;go_function=branched-chain amino acid transmembrane transporter activity|0015658||IEA,transmembrane transporter activity|0022857||IEA,ABC-type transporter activity|0140359||IEA;go_process=branched-chain amino acid transport|0015803||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013813061.1;locus_tag=IY40_RS22625;product=branched-chain amino acid ABC transporter substrate-binding protein;protein_id=WP_407863475.1;transl_table=11 NZ_JPQY01000046.1 RefSeq gene 25952 26665 . - . ID=gene-IY40_RS22630;Name=IY40_RS22630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS22630;old_locus_tag=IY40_23045 NZ_JPQY01000046.1 Protein Homology CDS 25952 26665 . - 0 ID=cds-WP_043143459.1;Parent=gene-IY40_RS22630;Dbxref=GenBank:WP_043143459.1;Name=WP_043143459.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016927620.1;locus_tag=IY40_RS22630;product=ABC transporter ATP-binding protein;protein_id=WP_043143459.1;transl_table=11 NZ_JPQY01000046.1 RefSeq gene 26658 27428 . - . ID=gene-IY40_RS22635;Name=IY40_RS22635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS22635;old_locus_tag=IY40_23050 NZ_JPQY01000046.1 Protein Homology CDS 26658 27428 . - 0 ID=cds-WP_033643185.1;Parent=gene-IY40_RS22635;Dbxref=GenBank:WP_033643185.1;Name=WP_033643185.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004938167.1;locus_tag=IY40_RS22635;product=ABC transporter ATP-binding protein;protein_id=WP_033643185.1;transl_table=11 NZ_JPQY01000046.1 RefSeq gene 27425 28537 . - . ID=gene-IY40_RS22640;Name=IY40_RS22640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS22640;old_locus_tag=IY40_23055 NZ_JPQY01000046.1 Protein Homology CDS 27425 28537 . - 0 ID=cds-WP_043143462.1;Parent=gene-IY40_RS22640;Dbxref=GenBank:WP_043143462.1;Name=WP_043143462.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013813058.1;locus_tag=IY40_RS22640;product=ABC transporter permease subunit;protein_id=WP_043143462.1;transl_table=11 NZ_JPQY01000046.1 RefSeq gene 28548 29498 . - . ID=gene-IY40_RS22645;Name=IY40_RS22645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS22645;old_locus_tag=IY40_23060 NZ_JPQY01000046.1 Protein Homology CDS 28548 29498 . - 0 ID=cds-WP_043143464.1;Parent=gene-IY40_RS22645;Dbxref=GenBank:WP_043143464.1;Name=WP_043143464.1;Ontology_term=GO:0015803,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=branched-chain amino acid transport|0015803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012145277.1;locus_tag=IY40_RS22645;product=branched-chain amino acid ABC transporter permease;protein_id=WP_043143464.1;transl_table=11 NZ_JPQY01000046.1 RefSeq gene 29669 30601 . + . ID=gene-IY40_RS22650;Name=IY40_RS22650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS22650;old_locus_tag=IY40_23065 NZ_JPQY01000046.1 Protein Homology CDS 29669 30601 . + 0 ID=cds-WP_043143466.1;Parent=gene-IY40_RS22650;Dbxref=GenBank:WP_043143466.1;Name=WP_043143466.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016927624.1;locus_tag=IY40_RS22650;product=LysR substrate-binding domain-containing protein;protein_id=WP_043143466.1;transl_table=11 NZ_JPQY01000046.1 RefSeq gene 30679 30981 . + . ID=gene-IY40_RS22655;Name=IY40_RS22655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS22655;old_locus_tag=IY40_23070 NZ_JPQY01000046.1 Protein Homology CDS 30679 30981 . + 0 ID=cds-WP_043143548.1;Parent=gene-IY40_RS22655;Dbxref=GenBank:WP_043143548.1;Name=WP_043143548.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019455442.1;locus_tag=IY40_RS22655;product=cupin domain-containing protein;protein_id=WP_043143548.1;transl_table=11 NZ_JPQY01000046.1 RefSeq gene 30978 31568 . - . ID=gene-IY40_RS22660;Name=IY40_RS22660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS22660;old_locus_tag=IY40_23075 NZ_JPQY01000046.1 Protein Homology CDS 30978 31568 . - 0 ID=cds-WP_043143468.1;Parent=gene-IY40_RS22660;Dbxref=GenBank:WP_043143468.1;Name=WP_043143468.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016927626.1;locus_tag=IY40_RS22660;product=TetR/AcrR family transcriptional regulator;protein_id=WP_043143468.1;transl_table=11 NZ_JPQY01000046.1 RefSeq gene 31709 32764 . + . ID=gene-IY40_RS22665;Name=IY40_RS22665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS22665;old_locus_tag=IY40_23080 NZ_JPQY01000046.1 Protein Homology CDS 31709 32764 . + 0 ID=cds-WP_043143470.1;Parent=gene-IY40_RS22665;Dbxref=GenBank:WP_043143470.1;Name=WP_043143470.1;Ontology_term=GO:0003824,GO:0016853;gbkey=CDS;go_function=catalytic activity|0003824||IEA,isomerase activity|0016853||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019455440.1;locus_tag=IY40_RS22665;product=sugar phosphate isomerase/epimerase family protein;protein_id=WP_043143470.1;transl_table=11 NZ_JPQY01000046.1 RefSeq gene 32790 33683 . + . ID=gene-IY40_RS22670;Name=IY40_RS22670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS22670;old_locus_tag=IY40_23085 NZ_JPQY01000046.1 Protein Homology CDS 32790 33683 . + 0 ID=cds-WP_043143472.1;Parent=gene-IY40_RS22670;Dbxref=GenBank:WP_043143472.1;Name=WP_043143472.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016927628.1;locus_tag=IY40_RS22670;product=alpha/beta fold hydrolase;protein_id=WP_043143472.1;transl_table=11 NZ_JPQY01000046.1 RefSeq gene 33673 34575 . + . ID=gene-IY40_RS22675;Name=IY40_RS22675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS22675;old_locus_tag=IY40_23090 NZ_JPQY01000046.1 Protein Homology CDS 33673 34575 . + 0 ID=cds-WP_025302926.1;Parent=gene-IY40_RS22675;Dbxref=GenBank:WP_025302926.1;Name=WP_025302926.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004938143.1;locus_tag=IY40_RS22675;product=alpha/beta hydrolase;protein_id=WP_025302926.1;transl_table=11 NZ_JPQY01000046.1 RefSeq gene 34624 36057 . - . ID=gene-IY40_RS22680;Name=IY40_RS22680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS22680;old_locus_tag=IY40_23095 NZ_JPQY01000046.1 Protein Homology CDS 34624 36057 . - 0 ID=cds-WP_025302925.1;Parent=gene-IY40_RS22680;Dbxref=GenBank:WP_025302925.1;Name=WP_025302925.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004944896.1;locus_tag=IY40_RS22680;product=NAD-dependent succinate-semialdehyde dehydrogenase;protein_id=WP_025302925.1;transl_table=11 NZ_JPQY01000046.1 RefSeq gene 36254 37081 . + . ID=gene-IY40_RS22685;Name=IY40_RS22685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS22685;old_locus_tag=IY40_23100 NZ_JPQY01000046.1 Protein Homology CDS 36254 37081 . + 0 ID=cds-WP_025302924.1;Parent=gene-IY40_RS22685;Dbxref=GenBank:WP_025302924.1;Name=WP_025302924.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004938135.1;locus_tag=IY40_RS22685;product=AraC family transcriptional regulator;protein_id=WP_025302924.1;transl_table=11 NZ_JPQY01000046.1 RefSeq gene 37180 38148 . + . ID=gene-IY40_RS22690;Name=IY40_RS22690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS22690;old_locus_tag=IY40_23105 NZ_JPQY01000046.1 Protein Homology CDS 37180 38148 . + 0 ID=cds-WP_043143475.1;Parent=gene-IY40_RS22690;Dbxref=GenBank:WP_043143475.1;Name=WP_043143475.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015377945.1;locus_tag=IY40_RS22690;product=DMT family transporter;protein_id=WP_043143475.1;transl_table=11 NZ_JPQY01000046.1 RefSeq gene 38176 40281 . - . ID=gene-IY40_RS22695;Name=fusA;gbkey=Gene;gene=fusA;gene_biotype=protein_coding;locus_tag=IY40_RS22695;old_locus_tag=IY40_23110 NZ_JPQY01000046.1 Protein Homology CDS 38176 40281 . - 0 ID=cds-WP_043143477.1;Parent=gene-IY40_RS22695;Dbxref=GenBank:WP_043143477.1;Name=WP_043143477.1;Ontology_term=GO:0006414,GO:0003746,GO:0005525;gbkey=CDS;gene=fusA;go_function=translation elongation factor activity|0003746||IEA,GTP binding|0005525||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019455434.1;locus_tag=IY40_RS22695;product=elongation factor G;protein_id=WP_043143477.1;transl_table=11 NZ_JPQY01000046.1 RefSeq gene 40531 40779 . - . ID=gene-IY40_RS22700;Name=IY40_RS22700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS22700;old_locus_tag=IY40_23115 NZ_JPQY01000046.1 Protein Homology CDS 40531 40779 . - 0 ID=cds-WP_016927634.1;Parent=gene-IY40_RS22700;Dbxref=GenBank:WP_016927634.1;Name=WP_016927634.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019455433.1;locus_tag=IY40_RS22700;product=CsbD family protein;protein_id=WP_016927634.1;transl_table=11 NZ_JPQY01000046.1 RefSeq gene 41001 42497 . + . ID=gene-IY40_RS22705;Name=IY40_RS22705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS22705;old_locus_tag=IY40_23120 NZ_JPQY01000046.1 Protein Homology CDS 41001 42497 . + 0 ID=cds-WP_043143479.1;Parent=gene-IY40_RS22705;Dbxref=GenBank:WP_043143479.1;Name=WP_043143479.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016927635.1;locus_tag=IY40_RS22705;product=alpha/beta hydrolase;protein_id=WP_043143479.1;transl_table=11 NZ_JPQY01000046.1 RefSeq gene 42528 43565 . - . ID=gene-IY40_RS22710;Name=IY40_RS22710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS22710;old_locus_tag=IY40_23125 NZ_JPQY01000046.1 Protein Homology CDS 42528 43565 . - 0 ID=cds-WP_043143482.1;Parent=gene-IY40_RS22710;Dbxref=GenBank:WP_043143482.1;Name=WP_043143482.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015377942.1;locus_tag=IY40_RS22710;product=ABC transporter ATP-binding protein;protein_id=WP_043143482.1;transl_table=11 NZ_JPQY01000046.1 RefSeq gene 43562 45145 . - . ID=gene-IY40_RS22715;Name=IY40_RS22715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS22715;old_locus_tag=IY40_23130 NZ_JPQY01000046.1 Protein Homology CDS 43562 45145 . - 0 ID=cds-WP_043143484.1;Parent=gene-IY40_RS22715;Dbxref=GenBank:WP_043143484.1;Name=WP_043143484.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012303903.1;locus_tag=IY40_RS22715;product=ABC transporter permease;protein_id=WP_043143484.1;transl_table=11 NZ_JPQY01000046.1 RefSeq gene 45179 46195 . - . ID=gene-IY40_RS22720;Name=IY40_RS22720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS22720;old_locus_tag=IY40_23135 NZ_JPQY01000046.1 Protein Homology CDS 45179 46195 . - 0 ID=cds-WP_043143486.1;Parent=gene-IY40_RS22720;Dbxref=GenBank:WP_043143486.1;Name=WP_043143486.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013813041.1;locus_tag=IY40_RS22720;product=iron ABC transporter substrate-binding protein;protein_id=WP_043143486.1;transl_table=11 NZ_JPQY01000046.1 RefSeq gene 46607 48226 . + . ID=gene-IY40_RS22725;Name=IY40_RS22725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS22725;old_locus_tag=IY40_23140 NZ_JPQY01000046.1 Protein Homology CDS 46607 48226 . + 0 ID=cds-WP_043143549.1;Parent=gene-IY40_RS22725;Dbxref=GenBank:WP_043143549.1;Name=WP_043143549.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015377940.1;locus_tag=IY40_RS22725;product=ABC transporter substrate-binding protein;protein_id=WP_043143549.1;transl_table=11 NZ_JPQY01000046.1 cmsearch riboswitch 48369 48542 . + . ID=id-NZ_JPQY01000046.1:48369..48542;Dbxref=RFAM:RF00380;Note=The M-box (ykoK) riboswitch appears to function as a genetic 'off' switch that is important for maintaining magnesium homeostasis in bacteria;bound_moiety=magnesium;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_JPQY01000046.1 RefSeq gene 48618 49640 . + . ID=gene-IY40_RS22730;Name=IY40_RS22730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS22730;old_locus_tag=IY40_23145 NZ_JPQY01000046.1 Protein Homology CDS 48618 49640 . + 0 ID=cds-WP_043143487.1;Parent=gene-IY40_RS22730;Dbxref=GenBank:WP_043143487.1;Name=WP_043143487.1;Ontology_term=GO:0015693,GO:0000287,GO:0005524,GO:0015095;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,ATP binding|0005524||IEA,magnesium ion transmembrane transporter activity|0015095||IEA;go_process=magnesium ion transport|0015693||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004938111.1;locus_tag=IY40_RS22730;product=magnesium transporter;protein_id=WP_043143487.1;transl_table=11 NZ_JPQY01000046.1 RefSeq gene 49773 49865 . + . ID=gene-IY40_RS26095;Name=mgtS;gbkey=Gene;gene=mgtS;gene_biotype=protein_coding;locus_tag=IY40_RS26095 NZ_JPQY01000046.1 Protein Homology CDS 49773 49865 . + 0 ID=cds-WP_004938109.1;Parent=gene-IY40_RS26095;Dbxref=GenBank:WP_004938109.1;Name=WP_004938109.1;gbkey=CDS;gene=mgtS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013813036.1;locus_tag=IY40_RS26095;product=protein MgtS;protein_id=WP_004938109.1;transl_table=11 NZ_JPQY01000046.1 RefSeq gene 49973 50152 . + . ID=gene-IY40_RS22735;Name=IY40_RS22735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS22735;old_locus_tag=IY40_23155 NZ_JPQY01000046.1 Protein Homology CDS 49973 50152 . + 0 ID=cds-WP_025302915.1;Parent=gene-IY40_RS22735;Dbxref=GenBank:WP_025302915.1;Name=WP_025302915.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019455425.1;locus_tag=IY40_RS22735;product=hypothetical protein;protein_id=WP_025302915.1;transl_table=11 NZ_JPQY01000046.1 RefSeq gene 50179 51555 . + . ID=gene-IY40_RS22740;Name=IY40_RS22740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS22740;old_locus_tag=IY40_23160 NZ_JPQY01000046.1 Protein Homology CDS 50179 51555 . + 0 ID=cds-WP_043143489.1;Parent=gene-IY40_RS22740;Dbxref=GenBank:WP_043143489.1;Name=WP_043143489.1;Ontology_term=GO:0006812,GO:0008324,GO:0015562,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA,efflux transmembrane transporter activity|0015562||IEA;go_process=monoatomic cation transport|0006812||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004938105.1;locus_tag=IY40_RS22740;product=cation diffusion facilitator family transporter;protein_id=WP_043143489.1;transl_table=11 NZ_JPQY01000046.1 RefSeq gene 51498 52343 . - . ID=gene-IY40_RS22745;Name=IY40_RS22745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS22745;old_locus_tag=IY40_23165 NZ_JPQY01000046.1 Protein Homology CDS 51498 52343 . - 0 ID=cds-WP_025302913.1;Parent=gene-IY40_RS22745;Dbxref=GenBank:WP_025302913.1;Name=WP_025302913.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015377938.1;locus_tag=IY40_RS22745;product=inositol monophosphatase family protein;protein_id=WP_025302913.1;transl_table=11 NZ_JPQY01000046.1 RefSeq gene 52410 52850 . - . ID=gene-IY40_RS22750;Name=IY40_RS22750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS22750;old_locus_tag=IY40_23170 NZ_JPQY01000046.1 Protein Homology CDS 52410 52850 . - 0 ID=cds-WP_043143491.1;Parent=gene-IY40_RS22750;Dbxref=GenBank:WP_043143491.1;Name=WP_043143491.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004938100.1;locus_tag=IY40_RS22750;product=GNAT family N-acetyltransferase;protein_id=WP_043143491.1;transl_table=11 NZ_JPQY01000046.1 RefSeq gene 52898 54628 . - . ID=gene-IY40_RS22755;Name=IY40_RS22755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS22755;old_locus_tag=IY40_23175 NZ_JPQY01000046.1 Protein Homology CDS 52898 54628 . - 0 ID=cds-WP_043143493.1;Parent=gene-IY40_RS22755;Dbxref=GenBank:WP_043143493.1;Name=WP_043143493.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015377937.1;locus_tag=IY40_RS22755;product=ABC-F family ATP-binding cassette domain-containing protein;protein_id=WP_043143493.1;transl_table=11 NZ_JPQY01000046.1 RefSeq gene 55079 57508 . + . ID=gene-IY40_RS22760;Name=IY40_RS22760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS22760;old_locus_tag=IY40_23180 NZ_JPQY01000046.1 Protein Homology CDS 55079 57508 . + 0 ID=cds-WP_065424061.1;Parent=gene-IY40_RS22760;Dbxref=GenBank:WP_065424061.1;Name=WP_065424061.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006325538.1;locus_tag=IY40_RS22760;product=DUF3772 domain-containing protein;protein_id=WP_065424061.1;transl_table=11 NZ_JPQY01000046.1 RefSeq gene 57557 57724 . - . ID=gene-IY40_RS22765;Name=IY40_RS22765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS22765;old_locus_tag=IY40_23185 NZ_JPQY01000046.1 Protein Homology CDS 57557 57724 . - 0 ID=cds-WP_164550866.1;Parent=gene-IY40_RS22765;Dbxref=GenBank:WP_164550866.1;Name=WP_164550866.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004938091.1;locus_tag=IY40_RS22765;product=hypothetical protein;protein_id=WP_164550866.1;transl_table=11 NZ_JPQY01000046.1 RefSeq gene 57854 58669 . + . ID=gene-IY40_RS22770;Name=IY40_RS22770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS22770;old_locus_tag=IY40_23190 NZ_JPQY01000046.1 Protein Homology CDS 57854 58669 . + 0 ID=cds-WP_043143496.1;Parent=gene-IY40_RS22770;Dbxref=GenBank:WP_043143496.1;Name=WP_043143496.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016927650.1;locus_tag=IY40_RS22770;product=alpha/beta fold hydrolase;protein_id=WP_043143496.1;transl_table=11 NZ_JPQY01000046.1 RefSeq gene 58720 60858 . - . ID=gene-IY40_RS22775;Name=IY40_RS22775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS22775;old_locus_tag=IY40_23195 NZ_JPQY01000046.1 Protein Homology CDS 58720 60858 . - 0 ID=cds-WP_407863459.1;Parent=gene-IY40_RS22775;Dbxref=GenBank:WP_407863459.1;Name=WP_407863459.1;Ontology_term=GO:0015891,GO:0055085,GO:0015267,GO:0046872,GO:0009279,GO:0016020;gbkey=CDS;go_component=cell outer membrane|0009279||IEA,membrane|0016020||IEA;go_function=channel activity|0015267||IEA,metal ion binding|0046872||IEA;go_process=siderophore transport|0015891||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019455416.1;locus_tag=IY40_RS22775;product=TonB-dependent siderophore receptor;protein_id=WP_407863459.1;transl_table=11 NZ_JPQY01000046.1 RefSeq gene 61246 62700 . + . ID=gene-IY40_RS22780;Name=IY40_RS22780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS22780;old_locus_tag=IY40_23200 NZ_JPQY01000046.1 Protein Homology CDS 61246 62700 . + 0 ID=cds-WP_043143498.1;Parent=gene-IY40_RS22780;Dbxref=GenBank:WP_043143498.1;Name=WP_043143498.1;Ontology_term=GO:0009966,GO:0009975;gbkey=CDS;go_function=cyclase activity|0009975||IEA;go_process=regulation of signal transduction|0009966||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004938083.1;locus_tag=IY40_RS22780;product=GGDEF domain-containing protein;protein_id=WP_043143498.1;transl_table=11 NZ_JPQY01000046.1 RefSeq gene 62772 63122 . + . ID=gene-IY40_RS22785;Name=IY40_RS22785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS22785;old_locus_tag=IY40_23205 NZ_JPQY01000046.1 Protein Homology CDS 62772 63122 . + 0 ID=cds-WP_025302905.1;Parent=gene-IY40_RS22785;Dbxref=GenBank:WP_025302905.1;Name=WP_025302905.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004938082.1;locus_tag=IY40_RS22785;product=DUF1428 domain-containing protein;protein_id=WP_025302905.1;transl_table=11 NZ_JPQY01000046.1 RefSeq gene 63134 63607 . + . ID=gene-IY40_RS22790;Name=IY40_RS22790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS22790;old_locus_tag=IY40_23210 NZ_JPQY01000046.1 Protein Homology CDS 63134 63607 . + 0 ID=cds-WP_025302904.1;Parent=gene-IY40_RS22790;Dbxref=GenBank:WP_025302904.1;Name=WP_025302904.1;Ontology_term=GO:0003824,GO:0046872;gbkey=CDS;go_function=catalytic activity|0003824||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004938077.1;locus_tag=IY40_RS22790;product=VOC family protein;protein_id=WP_025302904.1;transl_table=11 NZ_JPQY01000046.1 RefSeq gene 63635 64324 . + . ID=gene-IY40_RS22795;Name=IY40_RS22795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS22795;old_locus_tag=IY40_23215 NZ_JPQY01000046.1 Protein Homology CDS 63635 64324 . + 0 ID=cds-WP_043143500.1;Parent=gene-IY40_RS22795;Dbxref=GenBank:WP_043143500.1;Name=WP_043143500.1;Ontology_term=GO:0046873;gbkey=CDS;go_function=metal ion transmembrane transporter activity|0046873||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013813007.1;locus_tag=IY40_RS22795;product=VIT1/CCC1 transporter family protein;protein_id=WP_043143500.1;transl_table=11 NZ_JPQY01000046.1 RefSeq gene 64434 65771 . + . ID=gene-IY40_RS22800;Name=IY40_RS22800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS22800;old_locus_tag=IY40_23220 NZ_JPQY01000046.1 Protein Homology CDS 64434 65771 . + 0 ID=cds-WP_043143503.1;Parent=gene-IY40_RS22800;Dbxref=GenBank:WP_043143503.1;Name=WP_043143503.1;Ontology_term=GO:0046416,GO:0008721,GO:0030170;gbkey=CDS;go_function=D-serine ammonia-lyase activity|0008721||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=D-amino acid metabolic process|0046416||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004938072.1;locus_tag=IY40_RS22800;product=D-serine ammonia-lyase;protein_id=WP_043143503.1;transl_table=11 NZ_JPQY01000046.1 RefSeq gene 65820 67256 . - . ID=gene-IY40_RS22805;Name=IY40_RS22805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS22805;old_locus_tag=IY40_23225 NZ_JPQY01000046.1 Protein Homology CDS 65820 67256 . - 0 ID=cds-WP_099817256.1;Parent=gene-IY40_RS22805;Dbxref=GenBank:WP_099817256.1;Name=WP_099817256.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012229399.1;locus_tag=IY40_RS22805;product=6-phospho-beta-glucosidase;protein_id=WP_099817256.1;transl_table=11 NZ_JPQY01000046.1 RefSeq gene 67387 68121 . - . ID=gene-IY40_RS22810;Name=IY40_RS22810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS22810;old_locus_tag=IY40_23230 NZ_JPQY01000046.1 Protein Homology CDS 67387 68121 . - 0 ID=cds-WP_043143507.1;Parent=gene-IY40_RS22810;Dbxref=GenBank:WP_043143507.1;Name=WP_043143507.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012145227.1;locus_tag=IY40_RS22810;product=MurR/RpiR family transcriptional regulator;protein_id=WP_043143507.1;transl_table=11 NZ_JPQY01000046.1 RefSeq gene 68380 69336 . - . ID=gene-IY40_RS22815;Name=IY40_RS22815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS22815;old_locus_tag=IY40_23235 NZ_JPQY01000046.1 Protein Homology CDS 68380 69336 . - 0 ID=cds-WP_043143509.1;Parent=gene-IY40_RS22815;Dbxref=GenBank:WP_043143509.1;Name=WP_043143509.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004938062.1;locus_tag=IY40_RS22815;product=sulfonate ABC transporter substrate-binding protein;protein_id=WP_043143509.1;transl_table=11 NZ_JPQY01000046.1 RefSeq gene 69535 70860 . - . ID=gene-IY40_RS22820;Name=tet;gbkey=Gene;gene=tet;gene_biotype=protein_coding;locus_tag=IY40_RS22820;old_locus_tag=IY40_23240 NZ_JPQY01000046.1 Protein Homology CDS 69535 70860 . - 0 ID=cds-WP_306789722.1;Parent=gene-IY40_RS22820;Dbxref=GenBank:WP_306789722.1;Name=WP_306789722.1;Ontology_term=GO:0015904,GO:0008493;gbkey=CDS;gene=tet;go_function=tetracycline transmembrane transporter activity|0008493||IEA;go_process=tetracycline transmembrane transport|0015904||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_065424060.1;locus_tag=IY40_RS22820;product=Tet(A)/Tet(B)/Tet(C) family tetracycline efflux MFS transporter;protein_id=WP_306789722.1;transl_table=11 NZ_JPQY01000046.1 RefSeq gene 70778 71419 . + . ID=gene-IY40_RS22825;Name=tetR;gbkey=Gene;gene=tetR;gene_biotype=protein_coding;locus_tag=IY40_RS22825;old_locus_tag=IY40_23245 NZ_JPQY01000046.1 Protein Homology CDS 70778 71419 . + 0 ID=cds-WP_043143511.1;Parent=gene-IY40_RS22825;Dbxref=GenBank:WP_043143511.1;Name=WP_043143511.1;gbkey=CDS;gene=tetR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004938056.1;locus_tag=IY40_RS22825;product=tetracycline resistance transcriptional repressor TetR;protein_id=WP_043143511.1;transl_table=11 NZ_JPQY01000046.1 RefSeq gene 71595 72068 . + . ID=gene-IY40_RS22830;Name=IY40_RS22830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS22830;old_locus_tag=IY40_23250 NZ_JPQY01000046.1 Protein Homology CDS 71595 72068 . + 0 ID=cds-WP_025302897.1;Parent=gene-IY40_RS22830;Dbxref=GenBank:WP_025302897.1;Name=WP_025302897.1;Ontology_term=GO:0046872,GO:0051536,GO:0051537;gbkey=CDS;go_function=metal ion binding|0046872||IEA,iron-sulfur cluster binding|0051536||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015377926.1;locus_tag=IY40_RS22830;product=(2Fe-2S)-binding protein;protein_id=WP_025302897.1;transl_table=11 NZ_JPQY01000046.1 RefSeq gene 72065 74323 . + . ID=gene-IY40_RS22835;Name=IY40_RS22835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS22835;old_locus_tag=IY40_23255 NZ_JPQY01000046.1 Protein Homology CDS 72065 74323 . + 0 ID=cds-WP_043143513.1;Parent=gene-IY40_RS22835;Dbxref=GenBank:WP_043143513.1;Name=WP_043143513.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004938049.1;locus_tag=IY40_RS22835;product=xanthine dehydrogenase family protein molybdopterin-binding subunit;protein_id=WP_043143513.1;transl_table=11 NZ_JPQY01000046.1 RefSeq gene 74352 75650 . + . ID=gene-IY40_RS22840;Name=IY40_RS22840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS22840;old_locus_tag=IY40_23260 NZ_JPQY01000046.1 Protein Homology CDS 74352 75650 . + 0 ID=cds-WP_043143515.1;Parent=gene-IY40_RS22840;Dbxref=GenBank:WP_043143515.1;Name=WP_043143515.1;Ontology_term=GO:0009055,GO:0020037,GO:0046872;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004938045.1;locus_tag=IY40_RS22840;product=c-type cytochrome;protein_id=WP_043143515.1;transl_table=11 NZ_JPQY01000046.1 RefSeq gene 75720 76325 . + . ID=gene-IY40_RS22845;Name=IY40_RS22845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS22845;old_locus_tag=IY40_23265 NZ_JPQY01000046.1 Protein Homology CDS 75720 76325 . + 0 ID=cds-WP_025302894.1;Parent=gene-IY40_RS22845;Dbxref=GenBank:WP_025302894.1;Name=WP_025302894.1;Ontology_term=GO:0000166,GO:0016491;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019455403.1;locus_tag=IY40_RS22845;product=nitroreductase family protein;protein_id=WP_025302894.1;transl_table=11 NZ_JPQY01000046.1 RefSeq gene 76535 77431 . - . ID=gene-IY40_RS22850;Name=IY40_RS22850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS22850;old_locus_tag=IY40_23270 NZ_JPQY01000046.1 Protein Homology CDS 76535 77431 . - 0 ID=cds-WP_043143517.1;Parent=gene-IY40_RS22850;Dbxref=GenBank:WP_043143517.1;Name=WP_043143517.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015377923.1;locus_tag=IY40_RS22850;product=DMT family transporter;protein_id=WP_043143517.1;transl_table=11 NZ_JPQY01000046.1 RefSeq gene 77561 78130 . + . ID=gene-IY40_RS22855;Name=IY40_RS22855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS22855;old_locus_tag=IY40_23275 NZ_JPQY01000046.1 Protein Homology CDS 77561 78130 . + 0 ID=cds-WP_043143518.1;Parent=gene-IY40_RS22855;Dbxref=GenBank:WP_043143518.1;Name=WP_043143518.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016927668.1;locus_tag=IY40_RS22855;product=helix-turn-helix domain-containing protein;protein_id=WP_043143518.1;transl_table=11 NZ_JPQY01000046.1 RefSeq gene 78254 80179 . + . ID=gene-IY40_RS22860;Name=IY40_RS22860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS22860;old_locus_tag=IY40_23280 NZ_JPQY01000046.1 Protein Homology CDS 78254 80179 . + 0 ID=cds-WP_043143520.1;Parent=gene-IY40_RS22860;Dbxref=GenBank:WP_043143520.1;Name=WP_043143520.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015377922.1;locus_tag=IY40_RS22860;product=DUF3857 domain-containing protein;protein_id=WP_043143520.1;transl_table=11 NZ_JPQY01000046.1 RefSeq gene 80247 82541 . - . ID=gene-IY40_RS22865;Name=IY40_RS22865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS22865;old_locus_tag=IY40_23285 NZ_JPQY01000046.1 Protein Homology CDS 80247 82541 . - 0 ID=cds-WP_043143522.1;Parent=gene-IY40_RS22865;Dbxref=GenBank:WP_043143522.1;Name=WP_043143522.1;Ontology_term=GO:0016491,GO:0030151,GO:0051539;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,molybdenum ion binding|0030151||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019455398.1;locus_tag=IY40_RS22865;product=FdhF/YdeP family oxidoreductase;protein_id=WP_043143522.1;transl_table=11 NZ_JPQY01000046.1 RefSeq gene 82748 84421 . - . ID=gene-IY40_RS22870;Name=ggt;gbkey=Gene;gene=ggt;gene_biotype=protein_coding;locus_tag=IY40_RS22870;old_locus_tag=IY40_23290 NZ_JPQY01000046.1 Protein Homology CDS 82748 84421 . - 0 ID=cds-WP_043143523.1;Parent=gene-IY40_RS22870;Dbxref=GenBank:WP_043143523.1;Name=WP_043143523.1;Ontology_term=GO:0006750,GO:0006751,GO:0036374;gbkey=CDS;gene=ggt;go_function=glutathione hydrolase activity|0036374||IEA;go_process=glutathione biosynthetic process|0006750||IEA,glutathione catabolic process|0006751||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016927671.1;locus_tag=IY40_RS22870;product=gamma-glutamyltransferase;protein_id=WP_043143523.1;transl_table=11 NZ_JPQY01000046.1 RefSeq gene 84583 85446 . - . ID=gene-IY40_RS22875;Name=IY40_RS22875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS22875;old_locus_tag=IY40_23295 NZ_JPQY01000046.1 Protein Homology CDS 84583 85446 . - 0 ID=cds-WP_043143525.1;Parent=gene-IY40_RS22875;Dbxref=GenBank:WP_043143525.1;Name=WP_043143525.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015377919.1;locus_tag=IY40_RS22875;product=LysR substrate-binding domain-containing protein;protein_id=WP_043143525.1;transl_table=11 NZ_JPQY01000046.1 RefSeq gene 85590 86729 . + . ID=gene-IY40_RS22880;Name=IY40_RS22880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS22880;old_locus_tag=IY40_23300 NZ_JPQY01000046.1 Protein Homology CDS 85590 86729 . + 0 ID=cds-WP_043143527.1;Parent=gene-IY40_RS22880;Dbxref=GenBank:WP_043143527.1;Name=WP_043143527.1;Ontology_term=GO:0009446,GO:0004668;gbkey=CDS;go_function=protein-arginine deiminase activity|0004668||IEA;go_process=putrescine biosynthetic process|0009446||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004938005.1;locus_tag=IY40_RS22880;product=agmatine deiminase family protein;protein_id=WP_043143527.1;transl_table=11 NZ_JPQY01000046.1 RefSeq gene 86806 87501 . + . ID=gene-IY40_RS22885;Name=IY40_RS22885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS22885;old_locus_tag=IY40_23305 NZ_JPQY01000046.1 Protein Homology CDS 86806 87501 . + 0 ID=cds-WP_043143529.1;Parent=gene-IY40_RS22885;Dbxref=GenBank:WP_043143529.1;Name=WP_043143529.1;Ontology_term=GO:0032259,GO:0008168,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016927674.1;locus_tag=IY40_RS22885;product=class I SAM-dependent methyltransferase;protein_id=WP_043143529.1;transl_table=11 NZ_JPQY01000046.1 RefSeq gene 87498 88166 . - . ID=gene-IY40_RS22890;Name=IY40_RS22890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS22890;old_locus_tag=IY40_23310 NZ_JPQY01000046.1 Protein Homology CDS 87498 88166 . - 0 ID=cds-WP_235211389.1;Parent=gene-IY40_RS22890;Dbxref=GenBank:WP_235211389.1;Name=WP_235211389.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006325436.1;locus_tag=IY40_RS22890;product=TetR/AcrR family transcriptional regulator;protein_id=WP_235211389.1;transl_table=11 NZ_JPQY01000046.1 RefSeq gene 88249 89763 . + . ID=gene-IY40_RS22895;Name=IY40_RS22895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS22895;old_locus_tag=IY40_23315 NZ_JPQY01000046.1 Protein Homology CDS 88249 89763 . + 0 ID=cds-WP_043143533.1;Parent=gene-IY40_RS22895;Dbxref=GenBank:WP_043143533.1;Name=WP_043143533.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009635637.1;locus_tag=IY40_RS22895;product=MDR family MFS transporter;protein_id=WP_043143533.1;transl_table=11 NZ_JPQY01000046.1 RefSeq gene 89893 91035 . + . ID=gene-IY40_RS22900;Name=IY40_RS22900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS22900;old_locus_tag=IY40_23320 NZ_JPQY01000046.1 Protein Homology CDS 89893 91035 . + 0 ID=cds-WP_043143535.1;Parent=gene-IY40_RS22900;Dbxref=GenBank:WP_043143535.1;Name=WP_043143535.1;Ontology_term=GO:0006810,GO:0005215,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016927677.1;locus_tag=IY40_RS22900;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_043143535.1;transl_table=11 NZ_JPQY01000046.1 RefSeq gene 91037 94174 . + . ID=gene-IY40_RS22905;Name=IY40_RS22905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS22905;old_locus_tag=IY40_23325 NZ_JPQY01000046.1 Protein Homology CDS 91037 94174 . + 0 ID=cds-WP_043143537.1;Parent=gene-IY40_RS22905;Dbxref=GenBank:WP_043143537.1;Name=WP_043143537.1;Ontology_term=GO:0042908,GO:0015562,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=xenobiotic transport|0042908||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019455390.1;locus_tag=IY40_RS22905;product=efflux RND transporter permease subunit;protein_id=WP_043143537.1;transl_table=11 NZ_JPQY01000046.1 RefSeq gene 94176 95618 . + . ID=gene-IY40_RS22910;Name=IY40_RS22910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS22910;old_locus_tag=IY40_23330 NZ_JPQY01000046.1 Protein Homology CDS 94176 95618 . + 0 ID=cds-WP_043143539.1;Parent=gene-IY40_RS22910;Dbxref=GenBank:WP_043143539.1;Name=WP_043143539.1;Ontology_term=GO:0006810,GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006321932.1;locus_tag=IY40_RS22910;product=efflux transporter outer membrane subunit;protein_id=WP_043143539.1;transl_table=11 NZ_JPQY01000046.1 RefSeq gene 95774 96127 . + . ID=gene-IY40_RS22915;Name=IY40_RS22915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS22915;old_locus_tag=IY40_23335 NZ_JPQY01000046.1 Protein Homology CDS 95774 96127 . + 0 ID=cds-WP_025302880.1;Parent=gene-IY40_RS22915;Dbxref=GenBank:WP_025302880.1;Name=WP_025302880.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004937980.1;locus_tag=IY40_RS22915;product=DUF1493 family protein;protein_id=WP_025302880.1;transl_table=11 NZ_JPQY01000046.1 RefSeq gene 96135 96704 . - . ID=gene-IY40_RS22920;Name=IY40_RS22920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS22920;old_locus_tag=IY40_23340 NZ_JPQY01000046.1 Protein Homology CDS 96135 96704 . - 0 ID=cds-WP_043143542.1;Parent=gene-IY40_RS22920;Dbxref=GenBank:WP_043143542.1;Name=WP_043143542.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004944657.1;locus_tag=IY40_RS22920;product=DJ-1/PfpI family protein;protein_id=WP_043143542.1;transl_table=11 NZ_JPQY01000046.1 RefSeq gene 97040 98029 . + . ID=gene-IY40_RS22925;Name=IY40_RS22925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS22925;old_locus_tag=IY40_23345 NZ_JPQY01000046.1 Protein Homology CDS 97040 98029 . + 0 ID=cds-WP_043143544.1;Parent=gene-IY40_RS22925;Dbxref=GenBank:WP_043143544.1;Name=WP_043143544.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012253.6;locus_tag=IY40_RS22925;product=ankyrin repeat domain-containing protein;protein_id=WP_043143544.1;transl_table=11 NZ_JPQY01000046.1 RefSeq gene 98097 99371 . - . ID=gene-IY40_RS22930;Name=IY40_RS22930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS22930;old_locus_tag=IY40_23350 NZ_JPQY01000046.1 Protein Homology CDS 98097 99371 . - 0 ID=cds-WP_043143546.1;Parent=gene-IY40_RS22930;Dbxref=GenBank:WP_043143546.1;Name=WP_043143546.1;Ontology_term=GO:0006520,GO:0000166,GO:0016639;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,oxidoreductase activity%2C acting on the CH-NH2 group of donors%2C NAD or NADP as acceptor|0016639||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122303.1;locus_tag=IY40_RS22930;product=Glu/Leu/Phe/Val family dehydrogenase;protein_id=WP_043143546.1;transl_table=11 ##sequence-region NZ_JPQY01000047.1 1 43896 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=615 NZ_JPQY01000047.1 RefSeq region 1 43896 . + . ID=NZ_JPQY01000047.1:1..43896;Dbxref=taxon:615;collected-by=Mahloro H. Serepa%3B Vincent M. Gray;collection-date=2013-04-11;country=South Africa: North West Province;gbkey=Src;genome=genomic;identified-by=Mahloro H. Serepa%3B Vincent M. Gray;isolation-source=entomopathogenic nematode Oscheius sp. MCB living in soil;mol_type=genomic DNA;nat-host=Oscheius sp. MCB;strain=MCB NZ_JPQY01000047.1 RefSeq gene 1 852 . + . ID=gene-IY40_RS22935;Name=IY40_RS22935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS22935;old_locus_tag=IY40_23355;partial=true;start_range=.,1 NZ_JPQY01000047.1 Protein Homology CDS 1 852 . + 0 ID=cds-WP_043143557.1;Parent=gene-IY40_RS22935;Dbxref=GenBank:WP_043143557.1;Name=WP_043143557.1;Ontology_term=GO:0015288,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=porin activity|0015288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017893127.1;locus_tag=IY40_RS22935;partial=true;product=porin;protein_id=WP_043143557.1;start_range=.,1;transl_table=11 NZ_JPQY01000047.1 RefSeq gene 1095 1319 . - . ID=gene-IY40_RS22940;Name=IY40_RS22940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS22940;old_locus_tag=IY40_23360 NZ_JPQY01000047.1 Protein Homology CDS 1095 1319 . - 0 ID=cds-WP_016927388.1;Parent=gene-IY40_RS22940;Dbxref=GenBank:WP_016927388.1;Name=WP_016927388.1;Ontology_term=GO:0071468;gbkey=CDS;go_process=cellular response to acidic pH|0071468||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016927388.1;locus_tag=IY40_RS22940;product=biofilm development regulator YmgB/AriR family protein;protein_id=WP_016927388.1;transl_table=11 NZ_JPQY01000047.1 RefSeq gene 1443 1634 . - . ID=gene-IY40_RS22945;Name=IY40_RS22945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS22945;old_locus_tag=IY40_23365 NZ_JPQY01000047.1 Protein Homology CDS 1443 1634 . - 0 ID=cds-WP_004934567.1;Parent=gene-IY40_RS22945;Dbxref=GenBank:WP_004934567.1;Name=WP_004934567.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014728646.1;locus_tag=IY40_RS22945;product=YdfD/YebW family protein;protein_id=WP_004934567.1;transl_table=11 NZ_JPQY01000047.1 RefSeq gene 1863 2309 . + . ID=gene-IY40_RS22950;Name=lysM;gbkey=Gene;gene=lysM;gene_biotype=protein_coding;locus_tag=IY40_RS22950;old_locus_tag=IY40_23370 NZ_JPQY01000047.1 Protein Homology CDS 1863 2309 . + 0 ID=cds-WP_025303174.1;Parent=gene-IY40_RS22950;Dbxref=GenBank:WP_025303174.1;Name=WP_025303174.1;gbkey=CDS;gene=lysM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016927389.1;locus_tag=IY40_RS22950;product=peptidoglycan-binding protein LysM;protein_id=WP_025303174.1;transl_table=11 NZ_JPQY01000047.1 RefSeq gene 2575 2730 . + . ID=gene-IY40_RS26425;Name=IY40_RS26425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS26425 NZ_JPQY01000047.1 Protein Homology CDS 2575 2730 . + 0 ID=cds-WP_016927390.1;Parent=gene-IY40_RS26425;Dbxref=GenBank:WP_016927390.1;Name=WP_016927390.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004934560.1;locus_tag=IY40_RS26425;product=hypothetical protein;protein_id=WP_016927390.1;transl_table=11 NZ_JPQY01000047.1 RefSeq gene 2754 2918 . + . ID=gene-IY40_RS26430;Name=IY40_RS26430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS26430 NZ_JPQY01000047.1 Protein Homology CDS 2754 2918 . + 0 ID=cds-WP_162837923.1;Parent=gene-IY40_RS26430;Dbxref=GenBank:WP_162837923.1;Name=WP_162837923.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017893125.1;locus_tag=IY40_RS26430;product=hypothetical protein;protein_id=WP_162837923.1;transl_table=11 NZ_JPQY01000047.1 RefSeq gene 3019 3960 . + . ID=gene-IY40_RS22955;Name=IY40_RS22955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS22955;old_locus_tag=IY40_23385 NZ_JPQY01000047.1 Protein Homology CDS 3019 3960 . + 0 ID=cds-WP_043143559.1;Parent=gene-IY40_RS22955;Dbxref=GenBank:WP_043143559.1;Name=WP_043143559.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015378168.1;locus_tag=IY40_RS22955;product=pirin family protein;protein_id=WP_043143559.1;transl_table=11 NZ_JPQY01000047.1 RefSeq gene 4388 4741 . + . ID=gene-IY40_RS22960;Name=IY40_RS22960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS22960;old_locus_tag=IY40_23390 NZ_JPQY01000047.1 Protein Homology CDS 4388 4741 . + 0 ID=cds-WP_025303172.1;Parent=gene-IY40_RS22960;Dbxref=GenBank:WP_025303172.1;Name=WP_025303172.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016927392.1;locus_tag=IY40_RS22960;product=DUF1304 domain-containing protein;protein_id=WP_025303172.1;transl_table=11 NZ_JPQY01000047.1 RefSeq gene 4763 5149 . - . ID=gene-IY40_RS22965;Name=IY40_RS22965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS22965;old_locus_tag=IY40_23395 NZ_JPQY01000047.1 Protein Homology CDS 4763 5149 . - 0 ID=cds-WP_004927697.1;Parent=gene-IY40_RS22965;Dbxref=GenBank:WP_004927697.1;Name=WP_004927697.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002224436.1;locus_tag=IY40_RS22965;product=helix-turn-helix domain-containing protein;protein_id=WP_004927697.1;transl_table=11 NZ_JPQY01000047.1 RefSeq gene 5597 5809 . - . ID=gene-IY40_RS22975;Name=IY40_RS22975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS22975;old_locus_tag=IY40_23405 NZ_JPQY01000047.1 Protein Homology CDS 5597 5809 . - 0 ID=cds-WP_004927694.1;Parent=gene-IY40_RS22975;Dbxref=GenBank:WP_004927694.1;Name=WP_004927694.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006321586.1;locus_tag=IY40_RS22975;product=YccJ family protein;protein_id=WP_004927694.1;transl_table=11 NZ_JPQY01000047.1 RefSeq gene 5993 6232 . + . ID=gene-IY40_RS22980;Name=IY40_RS22980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS22980;old_locus_tag=IY40_23410 NZ_JPQY01000047.1 Protein Homology CDS 5993 6232 . + 0 ID=cds-WP_025303170.1;Parent=gene-IY40_RS22980;Dbxref=GenBank:WP_025303170.1;Name=WP_025303170.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004945684.1;locus_tag=IY40_RS22980;product=DUF2766 family protein;protein_id=WP_025303170.1;transl_table=11 NZ_JPQY01000047.1 RefSeq gene 6273 6506 . - . ID=gene-IY40_RS22985;Name=IY40_RS22985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS22985;old_locus_tag=IY40_23415 NZ_JPQY01000047.1 Protein Homology CDS 6273 6506 . - 0 ID=cds-WP_004927690.1;Parent=gene-IY40_RS22985;Dbxref=GenBank:WP_004927690.1;Name=WP_004927690.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004927690.1;locus_tag=IY40_RS22985;product=YobH family protein;protein_id=WP_004927690.1;transl_table=11 NZ_JPQY01000047.1 RefSeq gene 6668 6826 . + . ID=gene-IY40_RS22990;Name=IY40_RS22990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS22990 NZ_JPQY01000047.1 Protein Homology CDS 6668 6826 . + 0 ID=cds-WP_004927688.1;Parent=gene-IY40_RS22990;Dbxref=GenBank:WP_004927688.1;Name=WP_004927688.1;Ontology_term=GO:0070298;gbkey=CDS;go_process=negative regulation of phosphorelay signal transduction system|0070298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004927688.1;locus_tag=IY40_RS22990;product=PhoP/PhoQ regulator MgrB;protein_id=WP_004927688.1;transl_table=11 NZ_JPQY01000047.1 RefSeq gene 6908 7186 . + . ID=gene-IY40_RS22995;Name=IY40_RS22995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS22995;old_locus_tag=IY40_23425 NZ_JPQY01000047.1 Protein Homology CDS 6908 7186 . + 0 ID=cds-WP_025303169.1;Parent=gene-IY40_RS22995;Dbxref=GenBank:WP_025303169.1;Name=WP_025303169.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004945679.1;locus_tag=IY40_RS22995;product=YebO family protein;protein_id=WP_025303169.1;transl_table=11 NZ_JPQY01000047.1 RefSeq gene 7226 7633 . - . ID=gene-IY40_RS23000;Name=fos;gbkey=Gene;gene=fos;gene_biotype=protein_coding;locus_tag=IY40_RS23000;old_locus_tag=IY40_23430 NZ_JPQY01000047.1 Protein Homology CDS 7226 7633 . - 0 ID=cds-WP_043143562.1;Parent=gene-IY40_RS23000;Dbxref=GenBank:WP_043143562.1;Name=WP_043143562.1;Ontology_term=GO:0003824;gbkey=CDS;gene=fos;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019452851.1;locus_tag=IY40_RS23000;product=fosfomycin resistance glutathione transferase;protein_id=WP_043143562.1;transl_table=11 NZ_JPQY01000047.1 RefSeq gene 7803 8105 . + . ID=gene-IY40_RS23005;Name=IY40_RS23005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS23005;old_locus_tag=IY40_23435 NZ_JPQY01000047.1 Protein Homology CDS 7803 8105 . + 0 ID=cds-WP_004927682.1;Parent=gene-IY40_RS23005;Dbxref=GenBank:WP_004927682.1;Name=WP_004927682.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004927682.1;locus_tag=IY40_RS23005;product=phage protein NinX family protein;protein_id=WP_004927682.1;transl_table=11 NZ_JPQY01000047.1 RefSeq gene 8180 8416 . + . ID=gene-IY40_RS23010;Name=IY40_RS23010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS23010;old_locus_tag=IY40_23440 NZ_JPQY01000047.1 Protein Homology CDS 8180 8416 . + 0 ID=cds-WP_025303167.1;Parent=gene-IY40_RS23010;Dbxref=GenBank:WP_025303167.1;Name=WP_025303167.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004945669.1;locus_tag=IY40_RS23010;product=DUF4060 family protein;protein_id=WP_025303167.1;transl_table=11 NZ_JPQY01000047.1 RefSeq gene 8592 9953 . + . ID=gene-IY40_RS23015;Name=IY40_RS23015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS23015;old_locus_tag=IY40_23445 NZ_JPQY01000047.1 Protein Homology CDS 8592 9953 . + 0 ID=cds-WP_043143564.1;Parent=gene-IY40_RS23015;Dbxref=GenBank:WP_043143564.1;Name=WP_043143564.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019452849.1;locus_tag=IY40_RS23015;product=amino acid permease;protein_id=WP_043143564.1;transl_table=11 NZ_JPQY01000047.1 RefSeq gene 10000 10290 . - . ID=gene-IY40_RS23020;Name=IY40_RS23020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS23020;old_locus_tag=IY40_23450 NZ_JPQY01000047.1 Protein Homology CDS 10000 10290 . - 0 ID=cds-WP_043143566.1;Parent=gene-IY40_RS23020;Dbxref=GenBank:WP_043143566.1;Name=WP_043143566.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016927399.1;locus_tag=IY40_RS23020;product=hypothetical protein;protein_id=WP_043143566.1;transl_table=11 NZ_JPQY01000047.1 RefSeq gene 10511 11545 . + . ID=gene-IY40_RS23025;Name=IY40_RS23025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS23025 NZ_JPQY01000047.1 Protein Homology CDS 10511 11545 . + 0 ID=cds-WP_043143568.1;Parent=gene-IY40_RS23025;Dbxref=GenBank:WP_043143568.1;Name=WP_043143568.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016927400.1;locus_tag=IY40_RS23025;product=MBL fold metallo-hydrolase;protein_id=WP_043143568.1;transl_table=11 NZ_JPQY01000047.1 RefSeq gene 12226 12342 . + . ID=gene-IY40_RS25555;Name=IY40_RS25555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS25555 NZ_JPQY01000047.1 Protein Homology CDS 12226 12342 . + 0 ID=cds-WP_002211058.1;Parent=gene-IY40_RS25555;Dbxref=GenBank:WP_002211058.1;Name=WP_002211058.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211058.1;locus_tag=IY40_RS25555;product=DUF2627 domain-containing protein;protein_id=WP_002211058.1;transl_table=11 NZ_JPQY01000047.1 RefSeq gene 12384 12593 . + . ID=gene-IY40_RS23030;Name=cspE;gbkey=Gene;gene=cspE;gene_biotype=protein_coding;gene_synonym=gicA,msmC;locus_tag=IY40_RS23030;old_locus_tag=IY40_23460 NZ_JPQY01000047.1 Protein Homology CDS 12384 12593 . + 0 ID=cds-WP_002221949.1;Parent=gene-IY40_RS23030;Dbxref=GenBank:WP_002221949.1;Name=WP_002221949.1;Ontology_term=GO:0031564,GO:0001072,GO:0003697,GO:0003723;gbkey=CDS;gene=cspE;go_function=transcription antitermination factor activity%2C RNA binding|0001072||IEA,single-stranded DNA binding|0003697||IEA,RNA binding|0003723||IEA;go_process=transcription antitermination|0031564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004094893.1;locus_tag=IY40_RS23030;product=transcription antiterminator/RNA stability regulator CspE;protein_id=WP_002221949.1;transl_table=11 NZ_JPQY01000047.1 RefSeq gene 12646 13362 . - . ID=gene-IY40_RS23035;Name=pgeF;gbkey=Gene;gene=pgeF;gene_biotype=protein_coding;locus_tag=IY40_RS23035;old_locus_tag=IY40_23465 NZ_JPQY01000047.1 Protein Homology CDS 12646 13362 . - 0 ID=cds-WP_043143569.1;Parent=gene-IY40_RS23035;Dbxref=GenBank:WP_043143569.1;Name=WP_043143569.1;gbkey=CDS;gene=pgeF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019452846.1;locus_tag=IY40_RS23035;product=peptidoglycan editing factor PgeF;protein_id=WP_043143569.1;transl_table=11 NZ_JPQY01000047.1 RefSeq gene 13524 14342 . + . ID=gene-IY40_RS23040;Name=rlmA;gbkey=Gene;gene=rlmA;gene_biotype=protein_coding;locus_tag=IY40_RS23040;old_locus_tag=IY40_23470 NZ_JPQY01000047.1 Protein Homology CDS 13524 14342 . + 0 ID=cds-WP_025303162.1;Parent=gene-IY40_RS23040;Dbxref=GenBank:WP_025303162.1;Name=WP_025303162.1;Ontology_term=GO:0008168;gbkey=CDS;gene=rlmA;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004927618.1;locus_tag=IY40_RS23040;product=23S rRNA (guanine(745)-N(1))-methyltransferase;protein_id=WP_025303162.1;transl_table=11 NZ_JPQY01000047.1 RefSeq gene 14404 14973 . - . ID=gene-IY40_RS23045;Name=mntP;gbkey=Gene;gene=mntP;gene_biotype=protein_coding;locus_tag=IY40_RS23045;old_locus_tag=IY40_23475 NZ_JPQY01000047.1 Protein Homology CDS 14404 14973 . - 0 ID=cds-WP_025303161.1;Parent=gene-IY40_RS23045;Dbxref=GenBank:WP_025303161.1;Name=WP_025303161.1;gbkey=CDS;gene=mntP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005163653.1;locus_tag=IY40_RS23045;product=manganese efflux pump MntP;protein_id=WP_025303161.1;transl_table=11 NZ_JPQY01000047.1 cmsearch riboswitch 14985 15168 . - . ID=id-NZ_JPQY01000047.1:14985..15168;Dbxref=RFAM:RF00080;Note=yybP-ykoY riboswitch is a manganese riboswitch that directly binds Mn;bound_moiety=manganese;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_JPQY01000047.1 RefSeq gene 15387 15845 . - . ID=gene-IY40_RS23050;Name=IY40_RS23050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS23050;old_locus_tag=IY40_23480 NZ_JPQY01000047.1 Protein Homology CDS 15387 15845 . - 0 ID=cds-WP_025303160.1;Parent=gene-IY40_RS23050;Dbxref=GenBank:WP_025303160.1;Name=WP_025303160.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006325932.1;locus_tag=IY40_RS23050;product=DUF986 family protein;protein_id=WP_025303160.1;transl_table=11 NZ_JPQY01000047.1 RefSeq gene 15897 16739 . - . ID=gene-IY40_RS23055;Name=IY40_RS23055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS23055;old_locus_tag=IY40_23485 NZ_JPQY01000047.1 Protein Homology CDS 15897 16739 . - 0 ID=cds-WP_015378157.1;Parent=gene-IY40_RS23055;Dbxref=GenBank:WP_015378157.1;Name=WP_015378157.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017347199.1;locus_tag=IY40_RS23055;product=PTS mannose transporter subunit IID;protein_id=WP_015378157.1;transl_table=11 NZ_JPQY01000047.1 RefSeq gene 16755 17555 . - . ID=gene-IY40_RS23060;Name=IY40_RS23060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS23060;old_locus_tag=IY40_23490 NZ_JPQY01000047.1 Protein Homology CDS 16755 17555 . - 0 ID=cds-WP_015378156.1;Parent=gene-IY40_RS23060;Dbxref=GenBank:WP_015378156.1;Name=WP_015378156.1;Ontology_term=GO:0009401,GO:0034219,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,carbohydrate transmembrane transport|0034219||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310555.1;locus_tag=IY40_RS23060;product=PTS mannose/fructose/sorbose transporter subunit IIC;protein_id=WP_015378156.1;transl_table=11 NZ_JPQY01000047.1 RefSeq gene 17612 18571 . - . ID=gene-IY40_RS23065;Name=manX;gbkey=Gene;gene=manX;gene_biotype=protein_coding;locus_tag=IY40_RS23065;old_locus_tag=IY40_23495 NZ_JPQY01000047.1 Protein Homology CDS 17612 18571 . - 0 ID=cds-WP_043143571.1;Parent=gene-IY40_RS23065;Dbxref=GenBank:WP_043143571.1;Name=WP_043143571.1;Ontology_term=GO:0009401,GO:0008982;gbkey=CDS;gene=manX;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006325930.1;locus_tag=IY40_RS23065;product=PTS mannose transporter subunit IIAB;protein_id=WP_043143571.1;transl_table=11 NZ_JPQY01000047.1 RefSeq gene 19134 20678 . + . ID=gene-IY40_RS23070;Name=IY40_RS23070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS23070;old_locus_tag=IY40_23500 NZ_JPQY01000047.1 Protein Homology CDS 19134 20678 . + 0 ID=cds-WP_043143573.1;Parent=gene-IY40_RS23070;Dbxref=GenBank:WP_043143573.1;Name=WP_043143573.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016927405.1;locus_tag=IY40_RS23070;product=TerC family protein;protein_id=WP_043143573.1;transl_table=11 NZ_JPQY01000047.1 RefSeq gene 20695 22281 . - . ID=gene-IY40_RS23075;Name=IY40_RS23075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS23075;old_locus_tag=IY40_23505 NZ_JPQY01000047.1 Protein Homology CDS 20695 22281 . - 0 ID=cds-WP_043143575.1;Parent=gene-IY40_RS23075;Dbxref=GenBank:WP_043143575.1;Name=WP_043143575.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004927593.1;locus_tag=IY40_RS23075;product=EAL domain-containing protein;protein_id=WP_043143575.1;transl_table=11 NZ_JPQY01000047.1 RefSeq gene 22550 23914 . - . ID=gene-IY40_RS23080;Name=sdaA;gbkey=Gene;gene=sdaA;gene_biotype=protein_coding;locus_tag=IY40_RS23080;old_locus_tag=IY40_23510 NZ_JPQY01000047.1 Protein Homology CDS 22550 23914 . - 0 ID=cds-WP_043143577.1;Parent=gene-IY40_RS23080;Dbxref=GenBank:WP_043143577.1;Name=WP_043143577.1;gbkey=CDS;gene=sdaA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227643.1;locus_tag=IY40_RS23080;product=L-serine ammonia-lyase;protein_id=WP_043143577.1;transl_table=11 NZ_JPQY01000047.1 RefSeq gene 24361 24939 . - . ID=gene-IY40_RS23085;Name=IY40_RS23085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS23085;old_locus_tag=IY40_23515 NZ_JPQY01000047.1 Protein Homology CDS 24361 24939 . - 0 ID=cds-WP_025303155.1;Parent=gene-IY40_RS23085;Dbxref=GenBank:WP_025303155.1;Name=WP_025303155.1;Ontology_term=GO:0000287,GO:0010945;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,coenzyme A diphosphatase activity|0010945||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016927408.1;locus_tag=IY40_RS23085;product=CoA pyrophosphatase;protein_id=WP_025303155.1;transl_table=11 NZ_JPQY01000047.1 RefSeq gene 24936 26309 . - . ID=gene-IY40_RS23090;Name=pabB;gbkey=Gene;gene=pabB;gene_biotype=protein_coding;locus_tag=IY40_RS23090;old_locus_tag=IY40_23520 NZ_JPQY01000047.1 Protein Homology CDS 24936 26309 . - 0 ID=cds-WP_043143602.1;Parent=gene-IY40_RS23090;Dbxref=GenBank:WP_043143602.1;Name=WP_043143602.1;Ontology_term=GO:0009396;gbkey=CDS;gene=pabB;go_process=folic acid-containing compound biosynthetic process|0009396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004945618.1;locus_tag=IY40_RS23090;product=aminodeoxychorismate synthase component 1;protein_id=WP_043143602.1;transl_table=11 NZ_JPQY01000047.1 RefSeq gene 26835 27836 . + . ID=gene-IY40_RS23095;Name=IY40_RS23095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS23095;old_locus_tag=IY40_23525 NZ_JPQY01000047.1 Protein Homology CDS 26835 27836 . + 0 ID=cds-WP_043143604.1;Parent=gene-IY40_RS23095;Dbxref=GenBank:WP_043143604.1;Name=WP_043143604.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004927582.1;locus_tag=IY40_RS23095;product=glycosyltransferase;protein_id=WP_043143604.1;transl_table=11 NZ_JPQY01000047.1 RefSeq gene 27907 28146 . + . ID=gene-IY40_RS23100;Name=IY40_RS23100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS23100;old_locus_tag=IY40_23530 NZ_JPQY01000047.1 Protein Homology CDS 27907 28146 . + 0 ID=cds-WP_033643378.1;Parent=gene-IY40_RS23100;Dbxref=GenBank:WP_033643378.1;Name=WP_033643378.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006316778.1;locus_tag=IY40_RS23100;product=YoaH family protein;protein_id=WP_033643378.1;transl_table=11 NZ_JPQY01000047.1 RefSeq gene 28181 29359 . - . ID=gene-IY40_RS23105;Name=purT;gbkey=Gene;gene=purT;gene_biotype=protein_coding;locus_tag=IY40_RS23105;old_locus_tag=IY40_23535 NZ_JPQY01000047.1 Protein Homology CDS 28181 29359 . - 0 ID=cds-WP_043143578.1;Parent=gene-IY40_RS23105;Dbxref=GenBank:WP_043143578.1;Name=WP_043143578.1;Ontology_term=GO:0009152,GO:0000287,GO:0004644,GO:0005524;gbkey=CDS;gene=purT;go_function=magnesium ion binding|0000287||IEA,phosphoribosylglycinamide formyltransferase activity|0004644||IEA,ATP binding|0005524||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004927575.1;locus_tag=IY40_RS23105;product=formate-dependent phosphoribosylglycinamide formyltransferase;protein_id=WP_043143578.1;transl_table=11 NZ_JPQY01000047.1 RefSeq gene 29606 29815 . + . ID=gene-IY40_RS23110;Name=cspE;gbkey=Gene;gene=cspE;gene_biotype=protein_coding;gene_synonym=gicA,msmC;locus_tag=IY40_RS23110;old_locus_tag=IY40_23540 NZ_JPQY01000047.1 Protein Homology CDS 29606 29815 . + 0 ID=cds-WP_004927572.1;Parent=gene-IY40_RS23110;Dbxref=GenBank:WP_004927572.1;Name=WP_004927572.1;Ontology_term=GO:0031564,GO:0001072,GO:0003697,GO:0003723;gbkey=CDS;gene=cspE;go_function=transcription antitermination factor activity%2C RNA binding|0001072||IEA,single-stranded DNA binding|0003697||IEA,RNA binding|0003723||IEA;go_process=transcription antitermination|0031564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004386688.1;locus_tag=IY40_RS23110;product=transcription antiterminator/RNA stability regulator CspE;protein_id=WP_004927572.1;transl_table=11 NZ_JPQY01000047.1 RefSeq gene 29963 31345 . + . ID=gene-IY40_RS23115;Name=dbpA;gbkey=Gene;gene=dbpA;gene_biotype=protein_coding;locus_tag=IY40_RS23115;old_locus_tag=IY40_23545 NZ_JPQY01000047.1 Protein Homology CDS 29963 31345 . + 0 ID=cds-WP_043143580.1;Parent=gene-IY40_RS23115;Dbxref=GenBank:WP_043143580.1;Name=WP_043143580.1;Ontology_term=GO:0003676,GO:0003724,GO:0005524;gbkey=CDS;gene=dbpA;go_function=nucleic acid binding|0003676||IEA,RNA helicase activity|0003724||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192156.1;locus_tag=IY40_RS23115;product=ATP-dependent RNA helicase DbpA;protein_id=WP_043143580.1;transl_table=11 NZ_JPQY01000047.1 RefSeq gene 31434 31757 . + . ID=gene-IY40_RS23120;Name=IY40_RS23120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS23120;old_locus_tag=IY40_23550 NZ_JPQY01000047.1 Protein Homology CDS 31434 31757 . + 0 ID=cds-WP_043143582.1;Parent=gene-IY40_RS23120;Dbxref=GenBank:WP_043143582.1;Name=WP_043143582.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006316782.1;locus_tag=IY40_RS23120;product=YebG family protein;protein_id=WP_043143582.1;transl_table=11 NZ_JPQY01000047.1 RefSeq gene 31797 32105 . + . ID=gene-IY40_RS23125;Name=yqfB;gbkey=Gene;gene=yqfB;gene_biotype=protein_coding;locus_tag=IY40_RS23125;old_locus_tag=IY40_23555 NZ_JPQY01000047.1 Protein Homology CDS 31797 32105 . + 0 ID=cds-WP_004927562.1;Parent=gene-IY40_RS23125;Dbxref=GenBank:WP_004927562.1;Name=WP_004927562.1;gbkey=CDS;gene=yqfB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004945601.1;locus_tag=IY40_RS23125;product=N(4)-acetylcytidine aminohydrolase;protein_id=WP_004927562.1;transl_table=11 NZ_JPQY01000047.1 RefSeq gene 32176 32535 . + . ID=gene-IY40_RS23130;Name=yebF;gbkey=Gene;gene=yebF;gene_biotype=protein_coding;locus_tag=IY40_RS23130;old_locus_tag=IY40_23560 NZ_JPQY01000047.1 Protein Homology CDS 32176 32535 . + 0 ID=cds-WP_043143586.1;Parent=gene-IY40_RS23130;Dbxref=GenBank:WP_043143586.1;Name=WP_043143586.1;gbkey=CDS;gene=yebF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004927560.1;locus_tag=IY40_RS23130;product=protein YebF;protein_id=WP_043143586.1;transl_table=11 NZ_JPQY01000047.1 RefSeq gene 32597 33160 . - . ID=gene-IY40_RS23135;Name=IY40_RS23135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS23135;old_locus_tag=IY40_23565 NZ_JPQY01000047.1 Protein Homology CDS 32597 33160 . - 0 ID=cds-WP_033632830.1;Parent=gene-IY40_RS23135;Dbxref=GenBank:WP_033632830.1;Name=WP_033632830.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012229689.1;locus_tag=IY40_RS23135;product=lipoprotein;protein_id=WP_033632830.1;transl_table=11 NZ_JPQY01000047.1 RefSeq gene 33313 34953 . - . ID=gene-IY40_RS23140;Name=IY40_RS23140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS23140;old_locus_tag=IY40_23570 NZ_JPQY01000047.1 Protein Homology CDS 33313 34953 . - 0 ID=cds-WP_043143588.1;Parent=gene-IY40_RS23140;Dbxref=GenBank:WP_043143588.1;Name=WP_043143588.1;Ontology_term=GO:0006468,GO:0004672,GO:0005524;gbkey=CDS;go_function=protein kinase activity|0004672||IEA,ATP binding|0005524||IEA;go_process=protein phosphorylation|0006468||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004945591.1;locus_tag=IY40_RS23140;product=ABC1 kinase family protein;protein_id=WP_043143588.1;transl_table=11 NZ_JPQY01000047.1 RefSeq gene 34988 35635 . - . ID=gene-IY40_RS23145;Name=grxB;gbkey=Gene;gene=grxB;gene_biotype=protein_coding;locus_tag=IY40_RS23145;old_locus_tag=IY40_23575 NZ_JPQY01000047.1 Protein Homology CDS 34988 35635 . - 0 ID=cds-WP_043143590.1;Parent=gene-IY40_RS23145;Dbxref=GenBank:WP_043143590.1;Name=WP_043143590.1;Ontology_term=GO:0006749,GO:0004362,GO:0005515;gbkey=CDS;gene=grxB;go_function=glutathione-disulfide reductase (NADPH) activity|0004362||IEA,protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004945588.1;locus_tag=IY40_RS23145;product=glutaredoxin 2;protein_id=WP_043143590.1;transl_table=11 NZ_JPQY01000047.1 RefSeq gene 35763 36011 . - . ID=gene-IY40_RS23150;Name=IY40_RS23150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS23150;old_locus_tag=IY40_23580 NZ_JPQY01000047.1 Protein Homology CDS 35763 36011 . - 0 ID=cds-WP_043143592.1;Parent=gene-IY40_RS23150;Dbxref=GenBank:WP_043143592.1;Name=WP_043143592.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017893100.1;locus_tag=IY40_RS23150;product=hypothetical protein;protein_id=WP_043143592.1;transl_table=11 NZ_JPQY01000047.1 RefSeq gene 36085 37290 . - . ID=gene-IY40_RS23155;Name=mdtH;gbkey=Gene;gene=mdtH;gene_biotype=protein_coding;locus_tag=IY40_RS23155;old_locus_tag=IY40_23585 NZ_JPQY01000047.1 Protein Homology CDS 36085 37290 . - 0 ID=cds-WP_043143594.1;Parent=gene-IY40_RS23155;Dbxref=GenBank:WP_043143594.1;Name=WP_043143594.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=mdtH;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019452826.1;locus_tag=IY40_RS23155;product=multidrug efflux MFS transporter MdtH;protein_id=WP_043143594.1;transl_table=11 NZ_JPQY01000047.1 RefSeq gene 37636 38220 . + . ID=gene-IY40_RS23160;Name=rimJ;gbkey=Gene;gene=rimJ;gene_biotype=protein_coding;locus_tag=IY40_RS23160;old_locus_tag=IY40_23590 NZ_JPQY01000047.1 Protein Homology CDS 37636 38220 . + 0 ID=cds-WP_025303142.1;Parent=gene-IY40_RS23160;Dbxref=GenBank:WP_025303142.1;Name=WP_025303142.1;Ontology_term=GO:0008080;gbkey=CDS;gene=rimJ;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005272053.1;locus_tag=IY40_RS23160;product=ribosomal protein S5-alanine N-acetyltransferase;protein_id=WP_025303142.1;transl_table=11 NZ_JPQY01000047.1 RefSeq gene 38230 38877 . + . ID=gene-IY40_RS23165;Name=IY40_RS23165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS23165;old_locus_tag=IY40_23595 NZ_JPQY01000047.1 Protein Homology CDS 38230 38877 . + 0 ID=cds-WP_043143596.1;Parent=gene-IY40_RS23165;Dbxref=GenBank:WP_043143596.1;Name=WP_043143596.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013813345.1;locus_tag=IY40_RS23165;product=YceH family protein;protein_id=WP_043143596.1;transl_table=11 NZ_JPQY01000047.1 RefSeq gene 38870 39790 . + . ID=gene-IY40_RS23170;Name=IY40_RS23170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS23170;old_locus_tag=IY40_23600 NZ_JPQY01000047.1 Protein Homology CDS 38870 39790 . + 0 ID=cds-WP_043143598.1;Parent=gene-IY40_RS23170;Dbxref=GenBank:WP_043143598.1;Name=WP_043143598.1;Ontology_term=GO:0000166,GO:0003824;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015378143.1;locus_tag=IY40_RS23170;product=Gfo/Idh/MocA family protein;protein_id=WP_043143598.1;transl_table=11 NZ_JPQY01000047.1 RefSeq gene 39895 41430 . + . ID=gene-IY40_RS23175;Name=murJ;gbkey=Gene;gene=murJ;gene_biotype=protein_coding;locus_tag=IY40_RS23175;old_locus_tag=IY40_23605 NZ_JPQY01000047.1 Protein Homology CDS 39895 41430 . + 0 ID=cds-WP_043143599.1;Parent=gene-IY40_RS23175;Dbxref=GenBank:WP_043143599.1;Name=WP_043143599.1;Ontology_term=GO:0009252,GO:0034204;gbkey=CDS;gene=murJ;go_process=peptidoglycan biosynthetic process|0009252||IEA,lipid translocation|0034204||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006316793.1;locus_tag=IY40_RS23175;product=murein biosynthesis integral membrane protein MurJ;protein_id=WP_043143599.1;transl_table=11 NZ_JPQY01000047.1 RefSeq gene 41492 43222 . - . ID=gene-IY40_RS23180;Name=argS;gbkey=Gene;gene=argS;gene_biotype=protein_coding;locus_tag=IY40_RS23180;old_locus_tag=IY40_23610 NZ_JPQY01000047.1 Protein Homology CDS 41492 43222 . - 0 ID=cds-WP_025303138.1;Parent=gene-IY40_RS23180;Dbxref=GenBank:WP_025303138.1;Name=WP_025303138.1;Ontology_term=GO:0006420,GO:0004814,GO:0005524,GO:0005737;gbkey=CDS;gene=argS;go_component=cytoplasm|0005737||IEA;go_function=arginine-tRNA ligase activity|0004814||IEA,ATP binding|0005524||IEA;go_process=arginyl-tRNA aminoacylation|0006420||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019452821.1;locus_tag=IY40_RS23180;product=arginine--tRNA ligase;protein_id=WP_025303138.1;transl_table=11 ##sequence-region NZ_JPQY01000048.1 1 55805 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=615 NZ_JPQY01000048.1 RefSeq region 1 55805 . + . ID=NZ_JPQY01000048.1:1..55805;Dbxref=taxon:615;collected-by=Mahloro H. Serepa%3B Vincent M. Gray;collection-date=2013-04-11;country=South Africa: North West Province;gbkey=Src;genome=genomic;identified-by=Mahloro H. Serepa%3B Vincent M. Gray;isolation-source=entomopathogenic nematode Oscheius sp. MCB living in soil;mol_type=genomic DNA;nat-host=Oscheius sp. MCB;strain=MCB NZ_JPQY01000048.1 RefSeq gene 135 659 . + . ID=gene-IY40_RS23185;Name=ogt;gbkey=Gene;gene=ogt;gene_biotype=protein_coding;locus_tag=IY40_RS23185;old_locus_tag=IY40_23620 NZ_JPQY01000048.1 Protein Homology CDS 135 659 . + 0 ID=cds-WP_025302963.1;Parent=gene-IY40_RS23185;Dbxref=GenBank:WP_025302963.1;Name=WP_025302963.1;Ontology_term=GO:0006281,GO:0003908;gbkey=CDS;gene=ogt;go_function=methylated-DNA-[protein]-cysteine S-methyltransferase activity|0003908||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013813078.1;locus_tag=IY40_RS23185;product=methylated-DNA--[protein]-cysteine S-methyltransferase;protein_id=WP_025302963.1;transl_table=11 NZ_JPQY01000048.1 RefSeq gene 931 1695 . + . ID=gene-IY40_RS23190;Name=IY40_RS23190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS23190;old_locus_tag=IY40_23625 NZ_JPQY01000048.1 Protein Homology CDS 931 1695 . + 0 ID=cds-WP_004938278.1;Parent=gene-IY40_RS23190;Dbxref=GenBank:WP_004938278.1;Name=WP_004938278.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012145310.1;locus_tag=IY40_RS23190;product=FNR family transcription factor;protein_id=WP_004938278.1;transl_table=11 NZ_JPQY01000048.1 RefSeq gene 1822 2784 . + . ID=gene-IY40_RS23195;Name=uspE;gbkey=Gene;gene=uspE;gene_biotype=protein_coding;locus_tag=IY40_RS23195;old_locus_tag=IY40_23630 NZ_JPQY01000048.1 Protein Homology CDS 1822 2784 . + 0 ID=cds-WP_004938281.1;Parent=gene-IY40_RS23195;Dbxref=GenBank:WP_004938281.1;Name=WP_004938281.1;gbkey=CDS;gene=uspE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019452632.1;locus_tag=IY40_RS23195;product=universal stress protein UspE;protein_id=WP_004938281.1;transl_table=11 NZ_JPQY01000048.1 RefSeq gene 2842 4236 . - . ID=gene-IY40_RS23200;Name=pntB;gbkey=Gene;gene=pntB;gene_biotype=protein_coding;locus_tag=IY40_RS23200;old_locus_tag=IY40_23635 NZ_JPQY01000048.1 Protein Homology CDS 2842 4236 . - 0 ID=cds-WP_043143609.1;Parent=gene-IY40_RS23200;Dbxref=GenBank:WP_043143609.1;Name=WP_043143609.1;Ontology_term=GO:0008750,GO:0050661,GO:0016020;gbkey=CDS;gene=pntB;go_component=membrane|0016020||IEA;go_function=proton-translocating NAD(P)+ transhydrogenase activity|0008750||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015377983.1;locus_tag=IY40_RS23200;product=Re/Si-specific NAD(P)(+) transhydrogenase subunit beta;protein_id=WP_043143609.1;transl_table=11 NZ_JPQY01000048.1 RefSeq gene 4247 5776 . - . ID=gene-IY40_RS23205;Name=pntA;gbkey=Gene;gene=pntA;gene_biotype=protein_coding;locus_tag=IY40_RS23205;old_locus_tag=IY40_23640 NZ_JPQY01000048.1 Protein Homology CDS 4247 5776 . - 0 ID=cds-WP_043143611.1;Parent=gene-IY40_RS23205;Dbxref=GenBank:WP_043143611.1;Name=WP_043143611.1;Ontology_term=GO:1902600,GO:0008750;gbkey=CDS;gene=pntA;go_function=proton-translocating NAD(P)+ transhydrogenase activity|0008750||IEA;go_process=proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460439.1;locus_tag=IY40_RS23205;product=Re/Si-specific NAD(P)(+) transhydrogenase subunit alpha;protein_id=WP_043143611.1;transl_table=11 NZ_JPQY01000048.1 RefSeq gene 6314 7264 . + . ID=gene-IY40_RS23210;Name=ydgH;gbkey=Gene;gene=ydgH;gene_biotype=protein_coding;locus_tag=IY40_RS23210;old_locus_tag=IY40_23645 NZ_JPQY01000048.1 Protein Homology CDS 6314 7264 . + 0 ID=cds-WP_025302966.1;Parent=gene-IY40_RS23210;Dbxref=GenBank:WP_025302966.1;Name=WP_025302966.1;gbkey=CDS;gene=ydgH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304045.1;locus_tag=IY40_RS23210;product=DUF1471 family protein YdgH;protein_id=WP_025302966.1;transl_table=11 NZ_JPQY01000048.1 RefSeq gene 7509 8900 . + . ID=gene-IY40_RS23215;Name=IY40_RS23215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS23215;old_locus_tag=IY40_23655 NZ_JPQY01000048.1 Protein Homology CDS 7509 8900 . + 0 ID=cds-WP_025302967.1;Parent=gene-IY40_RS23215;Dbxref=GenBank:WP_025302967.1;Name=WP_025302967.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211017.1;locus_tag=IY40_RS23215;product=amino acid permease;protein_id=WP_025302967.1;transl_table=11 NZ_JPQY01000048.1 RefSeq gene 9118 9603 . + . ID=gene-IY40_RS23220;Name=IY40_RS23220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS23220;old_locus_tag=IY40_23660 NZ_JPQY01000048.1 Protein Homology CDS 9118 9603 . + 0 ID=cds-WP_043143614.1;Parent=gene-IY40_RS23220;Dbxref=GenBank:WP_043143614.1;Name=WP_043143614.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015377985.1;locus_tag=IY40_RS23220;product=hypothetical protein;protein_id=WP_043143614.1;transl_table=11 NZ_JPQY01000048.1 RefSeq gene 9637 10032 . + . ID=gene-IY40_RS23225;Name=IY40_RS23225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS23225;old_locus_tag=IY40_23665 NZ_JPQY01000048.1 Protein Homology CDS 9637 10032 . + 0 ID=cds-WP_025302969.1;Parent=gene-IY40_RS23225;Dbxref=GenBank:WP_025302969.1;Name=WP_025302969.1;Ontology_term=GO:0010181,GO:0016491;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004938299.1;locus_tag=IY40_RS23225;product=pyridoxamine 5'-phosphate oxidase family protein;protein_id=WP_025302969.1;transl_table=11 NZ_JPQY01000048.1 RefSeq gene 10132 10542 . - . ID=gene-IY40_RS23230;Name=IY40_RS23230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS23230;old_locus_tag=IY40_23670 NZ_JPQY01000048.1 Protein Homology CDS 10132 10542 . - 0 ID=cds-WP_025302970.1;Parent=gene-IY40_RS23230;Dbxref=GenBank:WP_025302970.1;Name=WP_025302970.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019452640.1;locus_tag=IY40_RS23230;product=hypothetical protein;protein_id=WP_025302970.1;transl_table=11 NZ_JPQY01000048.1 RefSeq gene 10727 11449 . + . ID=gene-IY40_RS23235;Name=folM;gbkey=Gene;gene=folM;gene_biotype=protein_coding;locus_tag=IY40_RS23235;old_locus_tag=IY40_23675 NZ_JPQY01000048.1 Protein Homology CDS 10727 11449 . + 0 ID=cds-WP_025302971.1;Parent=gene-IY40_RS23235;Dbxref=GenBank:WP_025302971.1;Name=WP_025302971.1;Ontology_term=GO:0016491;gbkey=CDS;gene=folM;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013813085.1;locus_tag=IY40_RS23235;product=dihydromonapterin reductase;protein_id=WP_025302971.1;transl_table=11 NZ_JPQY01000048.1 RefSeq gene 11525 12250 . + . ID=gene-IY40_RS23240;Name=rstA;gbkey=Gene;gene=rstA;gene_biotype=protein_coding;locus_tag=IY40_RS23240;old_locus_tag=IY40_23680 NZ_JPQY01000048.1 Protein Homology CDS 11525 12250 . + 0 ID=cds-WP_004938307.1;Parent=gene-IY40_RS23240;Dbxref=GenBank:WP_004938307.1;Name=WP_004938307.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=rstA;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005169653.1;locus_tag=IY40_RS23240;product=two-component system response regulator RstA;protein_id=WP_004938307.1;transl_table=11 NZ_JPQY01000048.1 RefSeq gene 12247 13551 . + . ID=gene-IY40_RS23245;Name=rstB;gbkey=Gene;gene=rstB;gene_biotype=protein_coding;locus_tag=IY40_RS23245;old_locus_tag=IY40_23685 NZ_JPQY01000048.1 Protein Homology CDS 12247 13551 . + 0 ID=cds-WP_043143616.1;Parent=gene-IY40_RS23245;Dbxref=GenBank:WP_043143616.1;Name=WP_043143616.1;Ontology_term=GO:0007165,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=rstB;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016927585.1;locus_tag=IY40_RS23245;product=two-component system sensor histidine kinase RstB;protein_id=WP_043143616.1;transl_table=11 NZ_JPQY01000048.1 RefSeq gene 13587 15086 . + . ID=gene-IY40_RS23250;Name=IY40_RS23250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS23250;old_locus_tag=IY40_23690 NZ_JPQY01000048.1 Protein Homology CDS 13587 15086 . + 0 ID=cds-WP_043143618.1;Parent=gene-IY40_RS23250;Dbxref=GenBank:WP_043143618.1;Name=WP_043143618.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016927584.1;locus_tag=IY40_RS23250;product=carboxypeptidase M32;protein_id=WP_043143618.1;transl_table=11 NZ_JPQY01000048.1 RefSeq gene 15253 16158 . - . ID=gene-IY40_RS23255;Name=IY40_RS23255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS23255;old_locus_tag=IY40_23695 NZ_JPQY01000048.1 Protein Homology CDS 15253 16158 . - 0 ID=cds-WP_043143620.1;Parent=gene-IY40_RS23255;Dbxref=GenBank:WP_043143620.1;Name=WP_043143620.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016927583.1;locus_tag=IY40_RS23255;product=alpha/beta fold hydrolase;protein_id=WP_043143620.1;transl_table=11 NZ_JPQY01000048.1 RefSeq gene 16344 16619 . + . ID=gene-IY40_RS23260;Name=asr;gbkey=Gene;gene=asr;gene_biotype=protein_coding;locus_tag=IY40_RS23260;old_locus_tag=IY40_23700 NZ_JPQY01000048.1 Protein Homology CDS 16344 16619 . + 0 ID=cds-WP_025302975.1;Parent=gene-IY40_RS23260;Dbxref=GenBank:WP_025302975.1;Name=WP_025302975.1;gbkey=CDS;gene=asr;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004930450.1;locus_tag=IY40_RS23260;product=acid resistance repetitive basic protein Asr;protein_id=WP_025302975.1;transl_table=11 NZ_JPQY01000048.1 RefSeq gene 16706 16786 . + . ID=gene-IY40_RS26730;Name=ydgU;gbkey=Gene;gene=ydgU;gene_biotype=protein_coding;locus_tag=IY40_RS26730 NZ_JPQY01000048.1 Protein Homology CDS 16706 16786 . + 0 ID=cds-WP_455677416.1;Parent=gene-IY40_RS26730;Dbxref=GenBank:WP_455677416.1;Name=WP_455677416.1;gbkey=CDS;gene=ydgU;inference=COORDINATES: protein motif:HMM:NF052476.1;locus_tag=IY40_RS26730;product=small membrane protein YdgU;protein_id=WP_455677416.1;transl_table=11 NZ_JPQY01000048.1 RefSeq gene 16914 17726 . + . ID=gene-IY40_RS23265;Name=IY40_RS23265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS23265;old_locus_tag=IY40_23710 NZ_JPQY01000048.1 Protein Homology CDS 16914 17726 . + 0 ID=cds-WP_043143623.1;Parent=gene-IY40_RS23265;Dbxref=GenBank:WP_043143623.1;Name=WP_043143623.1;Ontology_term=GO:0006508,GO:0004252,GO:0008233,GO:0008236;gbkey=CDS;go_function=serine-type endopeptidase activity|0004252||IEA,peptidase activity|0008233||IEA,serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006325633.1;locus_tag=IY40_RS23265;product=trypsin-like serine peptidase;protein_id=WP_043143623.1;transl_table=11 NZ_JPQY01000048.1 RefSeq gene 17825 21712 . - . ID=gene-IY40_RS23270;Name=hrpA;gbkey=Gene;gene=hrpA;gene_biotype=protein_coding;locus_tag=IY40_RS23270;old_locus_tag=IY40_23715 NZ_JPQY01000048.1 Protein Homology CDS 17825 21712 . - 0 ID=cds-WP_072008279.1;Parent=gene-IY40_RS23270;Dbxref=GenBank:WP_072008279.1;Name=WP_072008279.1;Ontology_term=GO:0003676,GO:0003724,GO:0005524;gbkey=CDS;gene=hrpA;go_function=nucleic acid binding|0003676||IEA,RNA helicase activity|0003724||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005270522.1;locus_tag=IY40_RS23270;product=ATP-dependent RNA helicase HrpA;protein_id=WP_072008279.1;transl_table=11 NZ_JPQY01000048.1 RefSeq gene 21982 22587 . + . ID=gene-IY40_RS23275;Name=azoR;gbkey=Gene;gene=azoR;gene_biotype=protein_coding;locus_tag=IY40_RS23275;old_locus_tag=IY40_23720 NZ_JPQY01000048.1 Protein Homology CDS 21982 22587 . + 0 ID=cds-WP_015377994.1;Parent=gene-IY40_RS23275;Dbxref=GenBank:WP_015377994.1;Name=WP_015377994.1;gbkey=CDS;gene=azoR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004861333.1;locus_tag=IY40_RS23275;product=FMN-dependent NADH-azoreductase;protein_id=WP_015377994.1;transl_table=11 NZ_JPQY01000048.1 RefSeq gene 22584 22721 . - . ID=gene-IY40_RS26690;Name=IY40_RS26690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS26690 NZ_JPQY01000048.1 Protein Homology CDS 22584 22721 . - 0 ID=cds-WP_127145959.1;Parent=gene-IY40_RS26690;Dbxref=GenBank:WP_127145959.1;Name=WP_127145959.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013266.6;locus_tag=IY40_RS26690;product=hypothetical protein;protein_id=WP_127145959.1;transl_table=11 NZ_JPQY01000048.1 RefSeq gene 22706 23029 . - . ID=gene-IY40_RS23280;Name=IY40_RS23280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS23280;old_locus_tag=IY40_23725 NZ_JPQY01000048.1 Protein Homology CDS 22706 23029 . - 0 ID=cds-WP_025302978.1;Parent=gene-IY40_RS23280;Dbxref=GenBank:WP_025302978.1;Name=WP_025302978.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004204018.1;locus_tag=IY40_RS23280;product=YdbL family probable chaperone protein;protein_id=WP_025302978.1;transl_table=11 NZ_JPQY01000048.1 RefSeq gene 23038 23235 . - . ID=gene-IY40_RS23285;Name=IY40_RS23285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS23285;old_locus_tag=IY40_23730 NZ_JPQY01000048.1 Protein Homology CDS 23038 23235 . - 0 ID=cds-WP_025302979.1;Parent=gene-IY40_RS23285;Dbxref=GenBank:WP_025302979.1;Name=WP_025302979.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004930472.1;locus_tag=IY40_RS23285;product=YnbE family lipoprotein;protein_id=WP_025302979.1;transl_table=11 NZ_JPQY01000048.1 RefSeq gene 23232 25844 . - . ID=gene-IY40_RS23290;Name=IY40_RS23290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS23290;old_locus_tag=IY40_23735 NZ_JPQY01000048.1 Protein Homology CDS 23232 25844 . - 0 ID=cds-WP_043143626.1;Parent=gene-IY40_RS23290;Dbxref=GenBank:WP_043143626.1;Name=WP_043143626.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015377996.1;locus_tag=IY40_RS23290;product=YdbH family protein;protein_id=WP_043143626.1;transl_table=11 NZ_JPQY01000048.1 RefSeq gene 26169 26993 . - . ID=gene-IY40_RS23295;Name=IY40_RS23295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS23295;old_locus_tag=IY40_23740 NZ_JPQY01000048.1 Protein Homology CDS 26169 26993 . - 0 ID=cds-WP_080287156.1;Parent=gene-IY40_RS23295;Dbxref=GenBank:WP_080287156.1;Name=WP_080287156.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:NF015431.6;locus_tag=IY40_RS23295;product=LysR family transcriptional regulator;protein_id=WP_080287156.1;transl_table=11 NZ_JPQY01000048.1 RefSeq gene 27133 27423 . + . ID=gene-IY40_RS23300;Name=IY40_RS23300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS23300;old_locus_tag=IY40_23745 NZ_JPQY01000048.1 Protein Homology CDS 27133 27423 . + 0 ID=cds-WP_025302982.1;Parent=gene-IY40_RS23300;Dbxref=GenBank:WP_025302982.1;Name=WP_025302982.1;Ontology_term=GO:0017000,GO:0004497,GO:0016491;gbkey=CDS;go_function=monooxygenase activity|0004497||IEA,oxidoreductase activity|0016491||IEA;go_process=antibiotic biosynthetic process|0017000||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016927572.1;locus_tag=IY40_RS23300;product=putative quinol monooxygenase;protein_id=WP_025302982.1;transl_table=11 NZ_JPQY01000048.1 RefSeq gene 27565 28557 . + . ID=gene-IY40_RS23305;Name=IY40_RS23305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS23305;old_locus_tag=IY40_23750 NZ_JPQY01000048.1 Protein Homology CDS 27565 28557 . + 0 ID=cds-WP_025302983.1;Parent=gene-IY40_RS23305;Dbxref=GenBank:WP_025302983.1;Name=WP_025302983.1;Ontology_term=GO:0008720,GO:0070404;gbkey=CDS;go_function=D-lactate dehydrogenase (NAD+) activity|0008720||IEA,NADH binding|0070404||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015377997.1;locus_tag=IY40_RS23305;product=2-hydroxyacid dehydrogenase;protein_id=WP_025302983.1;transl_table=11 NZ_JPQY01000048.1 RefSeq gene 28608 29036 . + . ID=gene-IY40_RS23310;Name=hslJ;gbkey=Gene;gene=hslJ;gene_biotype=protein_coding;locus_tag=IY40_RS23310;old_locus_tag=IY40_23755 NZ_JPQY01000048.1 Protein Homology CDS 28608 29036 . + 0 ID=cds-WP_043143628.1;Parent=gene-IY40_RS23310;Dbxref=GenBank:WP_043143628.1;Name=WP_043143628.1;gbkey=CDS;gene=hslJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016927570.1;locus_tag=IY40_RS23310;product=heat shock protein HslJ;protein_id=WP_043143628.1;transl_table=11 NZ_JPQY01000048.1 RefSeq gene 29058 29312 . - . ID=gene-IY40_RS23315;Name=IY40_RS23315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS23315;old_locus_tag=IY40_23760 NZ_JPQY01000048.1 Protein Homology CDS 29058 29312 . - 0 ID=cds-WP_015377999.1;Parent=gene-IY40_RS23315;Dbxref=GenBank:WP_015377999.1;Name=WP_015377999.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016927569.1;locus_tag=IY40_RS23315;product=DUF333 domain-containing protein;protein_id=WP_015377999.1;transl_table=11 NZ_JPQY01000048.1 RefSeq gene 29812 30144 . - . ID=gene-IY40_RS23320;Name=ssmE;gbkey=Gene;gene=ssmE;gene_biotype=protein_coding;locus_tag=IY40_RS23320;old_locus_tag=IY40_23765 NZ_JPQY01000048.1 Protein Homology CDS 29812 30144 . - 0 ID=cds-WP_025302985.1;Parent=gene-IY40_RS23320;Dbxref=GenBank:WP_025302985.1;Name=WP_025302985.1;gbkey=CDS;gene=ssmE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015063357.1;locus_tag=IY40_RS23320;product=multidrug efflux SMR transporter SsmE;protein_id=WP_025302985.1;transl_table=11 NZ_JPQY01000048.1 RefSeq gene 30383 33916 . + . ID=gene-IY40_RS23325;Name=nifJ;gbkey=Gene;gene=nifJ;gene_biotype=protein_coding;locus_tag=IY40_RS23325;old_locus_tag=IY40_23770 NZ_JPQY01000048.1 Protein Homology CDS 30383 33916 . + 0 ID=cds-WP_043143655.1;Parent=gene-IY40_RS23325;Dbxref=GenBank:WP_043143655.1;Name=WP_043143655.1;Ontology_term=GO:0022900,GO:0005506,GO:0016903,GO:0030976;gbkey=CDS;gene=nifJ;go_function=iron ion binding|0005506||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors|0016903||IEA,thiamine pyrophosphate binding|0030976||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004706661.1;locus_tag=IY40_RS23325;product=pyruvate:ferredoxin (flavodoxin) oxidoreductase;protein_id=WP_043143655.1;transl_table=11 NZ_JPQY01000048.1 RefSeq gene 34003 34317 . - . ID=gene-IY40_RS23330;Name=IY40_RS23330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS23330;old_locus_tag=IY40_23775 NZ_JPQY01000048.1 GeneMarkS-2+ CDS 34003 34317 . - 0 ID=cds-WP_025302987.1;Parent=gene-IY40_RS23330;Dbxref=GenBank:WP_025302987.1;Name=WP_025302987.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IY40_RS23330;product=hypothetical protein;protein_id=WP_025302987.1;transl_table=11 NZ_JPQY01000048.1 RefSeq gene 34612 35550 . + . ID=gene-IY40_RS23335;Name=ttcA;gbkey=Gene;gene=ttcA;gene_biotype=protein_coding;locus_tag=IY40_RS23335;old_locus_tag=IY40_23780 NZ_JPQY01000048.1 Protein Homology CDS 34612 35550 . + 0 ID=cds-WP_025302988.1;Parent=gene-IY40_RS23335;Dbxref=GenBank:WP_025302988.1;Name=WP_025302988.1;Ontology_term=GO:0008033;gbkey=CDS;gene=ttcA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004945064.1;locus_tag=IY40_RS23335;product=tRNA 2-thiocytidine(32) synthetase TtcA;protein_id=WP_025302988.1;transl_table=11 NZ_JPQY01000048.1 RefSeq gene 35697 36095 . + . ID=gene-IY40_RS23340;Name=IY40_RS23340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS23340;old_locus_tag=IY40_23785 NZ_JPQY01000048.1 Protein Homology CDS 35697 36095 . + 0 ID=cds-WP_025302989.1;Parent=gene-IY40_RS23340;Dbxref=GenBank:WP_025302989.1;Name=WP_025302989.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019452657.1;locus_tag=IY40_RS23340;product=VOC family protein;protein_id=WP_025302989.1;transl_table=11 NZ_JPQY01000048.1 RefSeq gene 36314 37297 . - . ID=gene-IY40_RS23345;Name=zntB;gbkey=Gene;gene=zntB;gene_biotype=protein_coding;locus_tag=IY40_RS23345;old_locus_tag=IY40_23790 NZ_JPQY01000048.1 Protein Homology CDS 36314 37297 . - 0 ID=cds-WP_025302990.1;Parent=gene-IY40_RS23345;Dbxref=GenBank:WP_025302990.1;Name=WP_025302990.1;Ontology_term=GO:0071577,GO:0005385,GO:0005886;gbkey=CDS;gene=zntB;go_component=plasma membrane|0005886||IEA;go_function=zinc ion transmembrane transporter activity|0005385||IEA;go_process=zinc ion transmembrane transport|0071577||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004702124.1;locus_tag=IY40_RS23345;product=zinc transporter ZntB;protein_id=WP_025302990.1;transl_table=11 NZ_JPQY01000048.1 RefSeq gene 37452 38153 . + . ID=gene-IY40_RS23350;Name=IY40_RS23350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS23350;old_locus_tag=IY40_23795 NZ_JPQY01000048.1 Protein Homology CDS 37452 38153 . + 0 ID=cds-WP_043143631.1;Parent=gene-IY40_RS23350;Dbxref=GenBank:WP_043143631.1;Name=WP_043143631.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004930501.1;locus_tag=IY40_RS23350;product=hypothetical protein;protein_id=WP_043143631.1;transl_table=11 NZ_JPQY01000048.1 RefSeq gene 38105 39196 . + . ID=gene-IY40_RS23355;Name=IY40_RS23355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS23355;old_locus_tag=IY40_23800 NZ_JPQY01000048.1 Protein Homology CDS 38105 39196 . + 0 ID=cds-WP_152561314.1;Parent=gene-IY40_RS23355;Dbxref=GenBank:WP_152561314.1;Name=WP_152561314.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019452659.1;locus_tag=IY40_RS23355;product=hypothetical protein;protein_id=WP_152561314.1;transl_table=11 NZ_JPQY01000048.1 RefSeq gene 39391 39639 . + . ID=gene-IY40_RS23360;Name=IY40_RS23360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS23360;old_locus_tag=IY40_23805 NZ_JPQY01000048.1 Protein Homology CDS 39391 39639 . + 0 ID=cds-WP_004930507.1;Parent=gene-IY40_RS23360;Dbxref=GenBank:WP_004930507.1;Name=WP_004930507.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004930507.1;locus_tag=IY40_RS23360;product=hypothetical protein;protein_id=WP_004930507.1;transl_table=11 NZ_JPQY01000048.1 RefSeq gene 39800 41434 . - . ID=gene-IY40_RS23365;Name=IY40_RS23365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS23365;old_locus_tag=IY40_23810 NZ_JPQY01000048.1 Protein Homology CDS 39800 41434 . - 0 ID=cds-WP_043143633.1;Parent=gene-IY40_RS23365;Dbxref=GenBank:WP_043143633.1;Name=WP_043143633.1;Ontology_term=GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013813105.1;locus_tag=IY40_RS23365;product=peptide ABC transporter substrate-binding protein;protein_id=WP_043143633.1;transl_table=11 NZ_JPQY01000048.1 RefSeq gene 41593 41943 . - . ID=gene-IY40_RS23370;Name=IY40_RS23370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS23370;old_locus_tag=IY40_23815 NZ_JPQY01000048.1 Protein Homology CDS 41593 41943 . - 0 ID=cds-WP_025302994.1;Parent=gene-IY40_RS23370;Dbxref=GenBank:WP_025302994.1;Name=WP_025302994.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004945080.1;locus_tag=IY40_RS23370;product=hypothetical protein;protein_id=WP_025302994.1;transl_table=11 NZ_JPQY01000048.1 RefSeq gene 42150 42857 . + . ID=gene-IY40_RS23375;Name=mpaA;gbkey=Gene;gene=mpaA;gene_biotype=protein_coding;locus_tag=IY40_RS23375;old_locus_tag=IY40_23820 NZ_JPQY01000048.1 Protein Homology CDS 42150 42857 . + 0 ID=cds-WP_043143634.1;Parent=gene-IY40_RS23375;Dbxref=GenBank:WP_043143634.1;Name=WP_043143634.1;Ontology_term=GO:0006508,GO:0004181,GO:0008270;gbkey=CDS;gene=mpaA;go_function=metallocarboxypeptidase activity|0004181||IEA,zinc ion binding|0008270||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011816358.1;locus_tag=IY40_RS23375;product=murein tripeptide amidase MpaA;protein_id=WP_043143634.1;transl_table=11 NZ_JPQY01000048.1 RefSeq gene 42861 43835 . - . ID=gene-IY40_RS23380;Name=ycjG;gbkey=Gene;gene=ycjG;gene_biotype=protein_coding;locus_tag=IY40_RS23380;old_locus_tag=IY40_23825 NZ_JPQY01000048.1 Protein Homology CDS 42861 43835 . - 0 ID=cds-WP_043143636.1;Parent=gene-IY40_RS23380;Dbxref=GenBank:WP_043143636.1;Name=WP_043143636.1;Ontology_term=GO:0009063,GO:0016855;gbkey=CDS;gene=ycjG;go_function=racemase and epimerase activity%2C acting on amino acids and derivatives|0016855||IEA;go_process=amino acid catabolic process|0009063||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004930520.1;locus_tag=IY40_RS23380;product=L-Ala-D/L-Glu epimerase;protein_id=WP_043143636.1;transl_table=11 NZ_JPQY01000048.1 RefSeq gene 44061 44564 . + . ID=gene-IY40_RS23385;Name=tpx;gbkey=Gene;gene=tpx;gene_biotype=protein_coding;locus_tag=IY40_RS23385;old_locus_tag=IY40_23830 NZ_JPQY01000048.1 Protein Homology CDS 44061 44564 . + 0 ID=cds-WP_004930536.1;Parent=gene-IY40_RS23385;Dbxref=GenBank:WP_004930536.1;Name=WP_004930536.1;Ontology_term=GO:0008379,GO:0016684;gbkey=CDS;gene=tpx;go_function=thioredoxin peroxidase activity|0008379||IEA,oxidoreductase activity%2C acting on peroxide as acceptor|0016684||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019083075.1;locus_tag=IY40_RS23385;product=thiol peroxidase;protein_id=WP_004930536.1;transl_table=11 NZ_JPQY01000048.1 RefSeq gene 44622 46193 . - . ID=gene-IY40_RS23390;Name=tyrR;gbkey=Gene;gene=tyrR;gene_biotype=protein_coding;locus_tag=IY40_RS23390;old_locus_tag=IY40_23835 NZ_JPQY01000048.1 Protein Homology CDS 44622 46193 . - 0 ID=cds-WP_025302997.1;Parent=gene-IY40_RS23390;Dbxref=GenBank:WP_025302997.1;Name=WP_025302997.1;Ontology_term=GO:0006355,GO:0008134;gbkey=CDS;gene=tyrR;go_function=transcription factor binding|0008134||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006319549.1;locus_tag=IY40_RS23390;product=transcriptional regulator TyrR;protein_id=WP_025302997.1;transl_table=11 NZ_JPQY01000048.1 RefSeq gene 46507 47568 . - . ID=gene-IY40_RS23395;Name=IY40_RS23395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS23395;old_locus_tag=IY40_23840 NZ_JPQY01000048.1 Protein Homology CDS 46507 47568 . - 0 ID=cds-WP_043143639.1;Parent=gene-IY40_RS23395;Dbxref=GenBank:WP_043143639.1;Name=WP_043143639.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017892997.1;locus_tag=IY40_RS23395;product=YcjF family protein;protein_id=WP_043143639.1;transl_table=11 NZ_JPQY01000048.1 RefSeq gene 47565 48962 . - . ID=gene-IY40_RS23400;Name=IY40_RS23400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS23400;old_locus_tag=IY40_23845 NZ_JPQY01000048.1 Protein Homology CDS 47565 48962 . - 0 ID=cds-WP_025302998.1;Parent=gene-IY40_RS23400;Dbxref=GenBank:WP_025302998.1;Name=WP_025302998.1;Ontology_term=GO:0003924,GO:0005525,GO:0019003;gbkey=CDS;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,GDP binding|0019003||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126510.1;locus_tag=IY40_RS23400;product=YcjX family GTP-binding protein;protein_id=WP_025302998.1;transl_table=11 NZ_JPQY01000048.1 RefSeq gene 48943 49209 . - . ID=gene-IY40_RS23405;Name=pspD;gbkey=Gene;gene=pspD;gene_biotype=protein_coding;locus_tag=IY40_RS23405;old_locus_tag=IY40_23850 NZ_JPQY01000048.1 Protein Homology CDS 48943 49209 . - 0 ID=cds-WP_072008280.1;Parent=gene-IY40_RS23405;Dbxref=GenBank:WP_072008280.1;Name=WP_072008280.1;gbkey=CDS;gene=pspD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006319543.1;locus_tag=IY40_RS23405;product=phage shock protein PspD;protein_id=WP_072008280.1;transl_table=11 NZ_JPQY01000048.1 RefSeq gene 49306 49665 . - . ID=gene-IY40_RS23410;Name=pspC;gbkey=Gene;gene=pspC;gene_biotype=protein_coding;locus_tag=IY40_RS23410;old_locus_tag=IY40_23855 NZ_JPQY01000048.1 Protein Homology CDS 49306 49665 . - 0 ID=cds-WP_004930552.1;Parent=gene-IY40_RS23410;Dbxref=GenBank:WP_004930552.1;Name=WP_004930552.1;gbkey=CDS;gene=pspC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015378011.1;locus_tag=IY40_RS23410;product=envelope stress response membrane protein PspC;protein_id=WP_004930552.1;transl_table=11 NZ_JPQY01000048.1 RefSeq gene 49665 49892 . - . ID=gene-IY40_RS23415;Name=pspB;gbkey=Gene;gene=pspB;gene_biotype=protein_coding;locus_tag=IY40_RS23415;old_locus_tag=IY40_23860 NZ_JPQY01000048.1 Protein Homology CDS 49665 49892 . - 0 ID=cds-WP_004930553.1;Parent=gene-IY40_RS23415;Dbxref=GenBank:WP_004930553.1;Name=WP_004930553.1;Ontology_term=GO:0009271;gbkey=CDS;gene=pspB;go_process=phage shock|0009271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005161022.1;locus_tag=IY40_RS23415;product=envelope stress response membrane protein PspB;protein_id=WP_004930553.1;transl_table=11 NZ_JPQY01000048.1 RefSeq gene 49956 50621 . - . ID=gene-IY40_RS23420;Name=pspA;gbkey=Gene;gene=pspA;gene_biotype=protein_coding;locus_tag=IY40_RS23420;old_locus_tag=IY40_23865 NZ_JPQY01000048.1 Protein Homology CDS 49956 50621 . - 0 ID=cds-WP_025303000.1;Parent=gene-IY40_RS23420;Dbxref=GenBank:WP_025303000.1;Name=WP_025303000.1;gbkey=CDS;gene=pspA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192521.1;locus_tag=IY40_RS23420;product=phage shock protein PspA;protein_id=WP_025303000.1;transl_table=11 NZ_JPQY01000048.1 RefSeq gene 50806 51813 . + . ID=gene-IY40_RS23425;Name=pspF;gbkey=Gene;gene=pspF;gene_biotype=protein_coding;locus_tag=IY40_RS23425;old_locus_tag=IY40_23870 NZ_JPQY01000048.1 Protein Homology CDS 50806 51813 . + 0 ID=cds-WP_043143644.1;Parent=gene-IY40_RS23425;Dbxref=GenBank:WP_043143644.1;Name=WP_043143644.1;gbkey=CDS;gene=pspF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013813112.1;locus_tag=IY40_RS23425;product=phage shock protein operon transcriptional activator;protein_id=WP_043143644.1;transl_table=11 NZ_JPQY01000048.1 RefSeq gene 52008 53195 . - . ID=gene-IY40_RS23430;Name=zigA;gbkey=Gene;gene=zigA;gene_biotype=protein_coding;locus_tag=IY40_RS23430;old_locus_tag=IY40_23875 NZ_JPQY01000048.1 Protein Homology CDS 52008 53195 . - 0 ID=cds-WP_043143646.1;Parent=gene-IY40_RS23430;Dbxref=GenBank:WP_043143646.1;Name=WP_043143646.1;gbkey=CDS;gene=zigA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013813113.1;locus_tag=IY40_RS23430;product=zinc metallochaperone GTPase ZigA;protein_id=WP_043143646.1;transl_table=11 NZ_JPQY01000048.1 RefSeq gene 53206 53766 . - . ID=gene-IY40_RS23435;Name=IY40_RS23435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS23435;old_locus_tag=IY40_23880 NZ_JPQY01000048.1 Protein Homology CDS 53206 53766 . - 0 ID=cds-WP_025303003.1;Parent=gene-IY40_RS23435;Dbxref=GenBank:WP_025303003.1;Name=WP_025303003.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019452670.1;locus_tag=IY40_RS23435;product=LbetaH domain-containing protein;protein_id=WP_025303003.1;transl_table=11 NZ_JPQY01000048.1 RefSeq gene 53756 54682 . - . ID=gene-IY40_RS23440;Name=folE2;gbkey=Gene;gene=folE2;gene_biotype=protein_coding;locus_tag=IY40_RS23440;old_locus_tag=IY40_23885 NZ_JPQY01000048.1 Protein Homology CDS 53756 54682 . - 0 ID=cds-WP_043143648.1;Parent=gene-IY40_RS23440;Dbxref=GenBank:WP_043143648.1;Name=WP_043143648.1;Ontology_term=GO:0003933;gbkey=CDS;gene=folE2;go_function=GTP cyclohydrolase activity|0003933||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006325664.1;locus_tag=IY40_RS23440;product=GTP cyclohydrolase FolE2;protein_id=WP_043143648.1;transl_table=11 NZ_JPQY01000048.1 RefSeq gene 54887 55805 . + . ID=gene-IY40_RS23445;Name=sapA;end_range=55805,.;gbkey=Gene;gene=sapA;gene_biotype=protein_coding;locus_tag=IY40_RS23445;old_locus_tag=IY40_23890;partial=true NZ_JPQY01000048.1 Protein Homology CDS 54887 55805 . + 0 ID=cds-WP_043143650.1;Parent=gene-IY40_RS23445;Dbxref=GenBank:WP_043143650.1;Name=WP_043143650.1;Ontology_term=GO:0055085,GO:0043190;end_range=55805,.;gbkey=CDS;gene=sapA;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012145357.1;locus_tag=IY40_RS23445;partial=true;product=ABC transporter substrate-binding protein SapA;protein_id=WP_043143650.1;transl_table=11 ##sequence-region NZ_JPQY01000049.1 1 1111 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=615 NZ_JPQY01000049.1 RefSeq region 1 1111 . + . ID=NZ_JPQY01000049.1:1..1111;Dbxref=taxon:615;collected-by=Mahloro H. Serepa%3B Vincent M. Gray;collection-date=2013-04-11;country=South Africa: North West Province;gbkey=Src;genome=genomic;identified-by=Mahloro H. Serepa%3B Vincent M. Gray;isolation-source=entomopathogenic nematode Oscheius sp. MCB living in soil;mol_type=genomic DNA;nat-host=Oscheius sp. MCB;strain=MCB NZ_JPQY01000049.1 RefSeq gene 1 1111 . + . ID=gene-IY40_RS23450;Name=IY40_RS23450;end_range=1111,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS23450;old_locus_tag=IY40_23895;partial=true;start_range=.,1 NZ_JPQY01000049.1 Protein Homology CDS 1 1111 . + 2 ID=cds-WP_043143661.1;Parent=gene-IY40_RS23450;Dbxref=GenBank:WP_043143661.1;Name=WP_043143661.1;end_range=1111,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013811186.1;locus_tag=IY40_RS23450;partial=true;product=conjugal transfer protein TraG N-terminal domain-containing protein;protein_id=WP_043143661.1;start_range=.,1;transl_table=11 ##sequence-region NZ_JPQY01000050.1 1 4631 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=615 NZ_JPQY01000050.1 RefSeq region 1 4631 . + . ID=NZ_JPQY01000050.1:1..4631;Dbxref=taxon:615;collected-by=Mahloro H. Serepa%3B Vincent M. Gray;collection-date=2013-04-11;country=South Africa: North West Province;gbkey=Src;genome=genomic;identified-by=Mahloro H. Serepa%3B Vincent M. Gray;isolation-source=entomopathogenic nematode Oscheius sp. MCB living in soil;mol_type=genomic DNA;nat-host=Oscheius sp. MCB;strain=MCB NZ_JPQY01000050.1 RefSeq gene 333 458 . - . ID=gene-IY40_RS25560;Name=IY40_RS25560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS25560 NZ_JPQY01000050.1 Protein Homology CDS 333 458 . - 0 ID=cds-WP_224753136.1;Parent=gene-IY40_RS25560;Dbxref=GenBank:WP_224753136.1;Name=WP_224753136.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001366886.1;locus_tag=IY40_RS25560;product=type I toxin-antitoxin system Hok family toxin;protein_id=WP_224753136.1;transl_table=11 NZ_JPQY01000050.1 RefSeq pseudogene 400 552 . - . ID=gene-IY40_RS26545;Name=IY40_RS26545;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IY40_RS26545;partial=true;pseudo=true;start_range=.,400 NZ_JPQY01000050.1 Protein Homology CDS 400 552 . - 0 ID=cds-IY40_RS26545;Parent=gene-IY40_RS26545;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF010277.0;locus_tag=IY40_RS26545;partial=true;product=DUF5431 family protein;pseudo=true;start_range=.,400;transl_table=11 NZ_JPQY01000050.1 RefSeq gene 742 972 . - . ID=gene-IY40_RS23455;Name=IY40_RS23455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS23455;old_locus_tag=IY40_23900 NZ_JPQY01000050.1 Protein Homology CDS 742 972 . - 0 ID=cds-WP_235211390.1;Parent=gene-IY40_RS23455;Dbxref=GenBank:WP_235211390.1;Name=WP_235211390.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016589766.1;locus_tag=IY40_RS23455;product=hypothetical protein;protein_id=WP_235211390.1;transl_table=11 NZ_JPQY01000050.1 RefSeq gene 963 1688 . - . ID=gene-IY40_RS23460;Name=IY40_RS23460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS23460;old_locus_tag=IY40_23905 NZ_JPQY01000050.1 Protein Homology CDS 963 1688 . - 0 ID=cds-WP_043143666.1;Parent=gene-IY40_RS23460;Dbxref=GenBank:WP_043143666.1;Name=WP_043143666.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000613062.1;locus_tag=IY40_RS23460;product=plasmid SOS inhibition protein A;protein_id=WP_043143666.1;transl_table=11 NZ_JPQY01000050.1 RefSeq gene 1688 2110 . - . ID=gene-IY40_RS23465;Name=psiB;gbkey=Gene;gene=psiB;gene_biotype=protein_coding;locus_tag=IY40_RS23465;old_locus_tag=IY40_23910 NZ_JPQY01000050.1 Protein Homology CDS 1688 2110 . - 0 ID=cds-WP_152561315.1;Parent=gene-IY40_RS23465;Dbxref=GenBank:WP_152561315.1;Name=WP_152561315.1;gbkey=CDS;gene=psiB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004194235.1;locus_tag=IY40_RS23465;product=conjugation system SOS inhibitor PsiB;protein_id=WP_152561315.1;transl_table=11 NZ_JPQY01000050.1 RefSeq gene 2153 4120 . - . ID=gene-IY40_RS23470;Name=IY40_RS23470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS23470;old_locus_tag=IY40_23915 NZ_JPQY01000050.1 Protein Homology CDS 2153 4120 . - 0 ID=cds-WP_043143668.1;Parent=gene-IY40_RS23470;Dbxref=GenBank:WP_043143668.1;Name=WP_043143668.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001485380.1;locus_tag=IY40_RS23470;product=ParB/RepB/Spo0J family partition protein;protein_id=WP_043143668.1;transl_table=11 NZ_JPQY01000050.1 RefSeq gene 4189 4518 . - . ID=gene-IY40_RS23475;Name=IY40_RS23475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS23475;old_locus_tag=IY40_23920 NZ_JPQY01000050.1 Protein Homology CDS 4189 4518 . - 0 ID=cds-WP_370991768.1;Parent=gene-IY40_RS23475;Dbxref=GenBank:WP_370991768.1;Name=WP_370991768.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017787.6;locus_tag=IY40_RS23475;product=DUF905 family protein;protein_id=WP_370991768.1;transl_table=11 ##sequence-region NZ_JPQY01000051.1 1 37777 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=615 NZ_JPQY01000051.1 RefSeq region 1 37777 . + . ID=NZ_JPQY01000051.1:1..37777;Dbxref=taxon:615;collected-by=Mahloro H. Serepa%3B Vincent M. Gray;collection-date=2013-04-11;country=South Africa: North West Province;gbkey=Src;genome=genomic;identified-by=Mahloro H. Serepa%3B Vincent M. Gray;isolation-source=entomopathogenic nematode Oscheius sp. MCB living in soil;mol_type=genomic DNA;nat-host=Oscheius sp. MCB;strain=MCB NZ_JPQY01000051.1 RefSeq gene 1 467 . + . ID=gene-IY40_RS23480;Name=IY40_RS23480;gbkey=Gene;gene_biotype=rRNA;locus_tag=IY40_RS23480;old_locus_tag=IY40_23925;partial=true;start_range=.,1 NZ_JPQY01000051.1 cmsearch rRNA 1 467 . + . ID=rna-IY40_RS23480;Parent=gene-IY40_RS23480;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=IY40_RS23480;partial=true;product=23S ribosomal RNA;start_range=.,1 NZ_JPQY01000051.1 cmsearch exon 1 467 . + . ID=exon-IY40_RS23480-1;Parent=rna-IY40_RS23480;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=IY40_RS23480;partial=true;product=23S ribosomal RNA;start_range=.,1 NZ_JPQY01000051.1 RefSeq gene 567 682 . + . ID=gene-IY40_RS23485;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=IY40_RS23485;old_locus_tag=IY40_23930 NZ_JPQY01000051.1 cmsearch rRNA 567 682 . + . ID=rna-IY40_RS23485;Parent=gene-IY40_RS23485;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=IY40_RS23485;product=5S ribosomal RNA NZ_JPQY01000051.1 cmsearch exon 567 682 . + . ID=exon-IY40_RS23485-1;Parent=rna-IY40_RS23485;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=IY40_RS23485;product=5S ribosomal RNA NZ_JPQY01000051.1 RefSeq gene 1059 2096 . + . ID=gene-IY40_RS23490;Name=murB;gbkey=Gene;gene=murB;gene_biotype=protein_coding;locus_tag=IY40_RS23490;old_locus_tag=IY40_23935 NZ_JPQY01000051.1 Protein Homology CDS 1059 2096 . + 0 ID=cds-WP_043143678.1;Parent=gene-IY40_RS23490;Dbxref=GenBank:WP_043143678.1;Name=WP_043143678.1;Ontology_term=GO:0008762,GO:0071949;gbkey=CDS;gene=murB;go_function=UDP-N-acetylmuramate dehydrogenase activity|0008762||IEA,FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006323127.1;locus_tag=IY40_RS23490;product=UDP-N-acetylmuramate dehydrogenase;protein_id=WP_043143678.1;transl_table=11 NZ_JPQY01000051.1 RefSeq gene 2093 3055 . + . ID=gene-IY40_RS23495;Name=birA;gbkey=Gene;gene=birA;gene_biotype=protein_coding;locus_tag=IY40_RS23495;old_locus_tag=IY40_23940 NZ_JPQY01000051.1 Protein Homology CDS 2093 3055 . + 0 ID=cds-WP_025304935.1;Parent=gene-IY40_RS23495;Dbxref=GenBank:WP_025304935.1;Name=WP_025304935.1;Ontology_term=GO:0036211,GO:0004077;gbkey=CDS;gene=birA;go_function=biotin--[biotin carboxyl-carrier protein] ligase activity|0004077||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013811122.1;locus_tag=IY40_RS23495;product=bifunctional biotin--[acetyl-CoA-carboxylase] ligase/biotin operon repressor BirA;protein_id=WP_025304935.1;transl_table=11 NZ_JPQY01000051.1 RefSeq gene 3104 4054 . - . ID=gene-IY40_RS23500;Name=coaA;gbkey=Gene;gene=coaA;gene_biotype=protein_coding;locus_tag=IY40_RS23500;old_locus_tag=IY40_23945 NZ_JPQY01000051.1 Protein Homology CDS 3104 4054 . - 0 ID=cds-WP_025304936.1;Parent=gene-IY40_RS23500;Dbxref=GenBank:WP_025304936.1;Name=WP_025304936.1;Ontology_term=GO:0015937,GO:0004594;gbkey=CDS;gene=coaA;go_function=pantothenate kinase activity|0004594||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463013.1;locus_tag=IY40_RS23500;product=type I pantothenate kinase;protein_id=WP_025304936.1;transl_table=11 NZ_JPQY01000051.1 RefSeq gene 4274 4822 . - . ID=gene-IY40_RS23505;Name=IY40_RS23505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS23505;old_locus_tag=IY40_23950 NZ_JPQY01000051.1 Protein Homology CDS 4274 4822 . - 0 ID=cds-WP_025304937.1;Parent=gene-IY40_RS23505;Dbxref=GenBank:WP_025304937.1;Name=WP_025304937.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006323130.1;locus_tag=IY40_RS23505;product=GNAT family N-acetyltransferase;protein_id=WP_025304937.1;transl_table=11 NZ_JPQY01000051.1 RefSeq gene 5219 5294 . + . ID=gene-IY40_RS23510;Name=IY40_RS23510;gbkey=Gene;gene_biotype=tRNA;locus_tag=IY40_RS23510;old_locus_tag=IY40_23955 NZ_JPQY01000051.1 tRNAscan-SE tRNA 5219 5294 . + . ID=rna-IY40_RS23510;Parent=gene-IY40_RS23510;anticodon=(pos:5252..5254);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=IY40_RS23510;product=tRNA-Thr NZ_JPQY01000051.1 tRNAscan-SE exon 5219 5294 . + . ID=exon-IY40_RS23510-1;Parent=rna-IY40_RS23510;anticodon=(pos:5252..5254);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=IY40_RS23510;product=tRNA-Thr NZ_JPQY01000051.1 RefSeq gene 5320 5404 . + . ID=gene-IY40_RS23515;Name=IY40_RS23515;gbkey=Gene;gene_biotype=tRNA;locus_tag=IY40_RS23515;old_locus_tag=IY40_23960 NZ_JPQY01000051.1 tRNAscan-SE tRNA 5320 5404 . + . ID=rna-IY40_RS23515;Parent=gene-IY40_RS23515;anticodon=(pos:5354..5356);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=IY40_RS23515;product=tRNA-Tyr NZ_JPQY01000051.1 tRNAscan-SE exon 5320 5404 . + . ID=exon-IY40_RS23515-1;Parent=rna-IY40_RS23515;anticodon=(pos:5354..5356);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=IY40_RS23515;product=tRNA-Tyr NZ_JPQY01000051.1 RefSeq gene 5451 5566 . + . ID=gene-IY40_RS25565;Name=IY40_RS25565;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IY40_RS25565;old_locus_tag=IY40_24120 NZ_JPQY01000051.1 cmsearch ncRNA 5451 5566 . + . ID=rna-IY40_RS25565;Parent=gene-IY40_RS25565;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=IY40_RS25565;product=RtT sRNA NZ_JPQY01000051.1 cmsearch exon 5451 5566 . + . ID=exon-IY40_RS25565-1;Parent=rna-IY40_RS25565;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=IY40_RS25565;product=RtT sRNA NZ_JPQY01000051.1 RefSeq gene 5603 5677 . + . ID=gene-IY40_RS23520;Name=IY40_RS23520;gbkey=Gene;gene_biotype=tRNA;locus_tag=IY40_RS23520;old_locus_tag=IY40_23965 NZ_JPQY01000051.1 tRNAscan-SE tRNA 5603 5677 . + . ID=rna-IY40_RS23520;Parent=gene-IY40_RS23520;anticodon=(pos:5636..5638);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=IY40_RS23520;product=tRNA-Gly NZ_JPQY01000051.1 tRNAscan-SE exon 5603 5677 . + . ID=exon-IY40_RS23520-1;Parent=rna-IY40_RS23520;anticodon=(pos:5636..5638);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=IY40_RS23520;product=tRNA-Gly NZ_JPQY01000051.1 RefSeq gene 5684 5759 . + . ID=gene-IY40_RS23525;Name=IY40_RS23525;gbkey=Gene;gene_biotype=tRNA;locus_tag=IY40_RS23525;old_locus_tag=IY40_23970 NZ_JPQY01000051.1 tRNAscan-SE tRNA 5684 5759 . + . ID=rna-IY40_RS23525;Parent=gene-IY40_RS23525;anticodon=(pos:5717..5719);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=IY40_RS23525;product=tRNA-Thr NZ_JPQY01000051.1 tRNAscan-SE exon 5684 5759 . + . ID=exon-IY40_RS23525-1;Parent=rna-IY40_RS23525;anticodon=(pos:5717..5719);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=IY40_RS23525;product=tRNA-Thr NZ_JPQY01000051.1 RefSeq gene 5869 7053 . + . ID=gene-IY40_RS23530;Name=tuf;gbkey=Gene;gene=tuf;gene_biotype=protein_coding;locus_tag=IY40_RS23530;old_locus_tag=IY40_23975 NZ_JPQY01000051.1 Protein Homology CDS 5869 7053 . + 0 ID=cds-WP_015376315.1-2;Parent=gene-IY40_RS23530;Dbxref=GenBank:WP_015376315.1;Name=WP_015376315.1;Ontology_term=GO:0006414,GO:0003746,GO:0005525;gbkey=CDS;gene=tuf;go_function=translation elongation factor activity|0003746||IEA,GTP binding|0005525||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012147227.1;locus_tag=IY40_RS23530;product=elongation factor Tu;protein_id=WP_015376315.1;transl_table=11 NZ_JPQY01000051.1 RefSeq gene 7313 7696 . + . ID=gene-IY40_RS23535;Name=secE;gbkey=Gene;gene=secE;gene_biotype=protein_coding;locus_tag=IY40_RS23535;old_locus_tag=IY40_23980 NZ_JPQY01000051.1 Protein Homology CDS 7313 7696 . + 0 ID=cds-WP_004929916.1;Parent=gene-IY40_RS23535;Dbxref=GenBank:WP_004929916.1;Name=WP_004929916.1;gbkey=CDS;gene=secE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007665874.1;locus_tag=IY40_RS23535;product=preprotein translocase subunit SecE;protein_id=WP_004929916.1;transl_table=11 NZ_JPQY01000051.1 RefSeq gene 7698 8243 . + . ID=gene-IY40_RS23540;Name=nusG;gbkey=Gene;gene=nusG;gene_biotype=protein_coding;locus_tag=IY40_RS23540;old_locus_tag=IY40_23985 NZ_JPQY01000051.1 Protein Homology CDS 7698 8243 . + 0 ID=cds-WP_004929914.1;Parent=gene-IY40_RS23540;Dbxref=GenBank:WP_004929914.1;Name=WP_004929914.1;Ontology_term=GO:0032784;gbkey=CDS;gene=nusG;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004953928.1;locus_tag=IY40_RS23540;product=transcription termination/antitermination protein NusG;protein_id=WP_004929914.1;transl_table=11 NZ_JPQY01000051.1 RefSeq gene 8409 8837 . + . ID=gene-IY40_RS23545;Name=rplK;gbkey=Gene;gene=rplK;gene_biotype=protein_coding;locus_tag=IY40_RS23545;old_locus_tag=IY40_23990 NZ_JPQY01000051.1 Protein Homology CDS 8409 8837 . + 0 ID=cds-WP_015376316.1;Parent=gene-IY40_RS23545;Dbxref=GenBank:WP_015376316.1;Name=WP_015376316.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplK;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006121495.1;locus_tag=IY40_RS23545;product=50S ribosomal protein L11;protein_id=WP_015376316.1;transl_table=11 NZ_JPQY01000051.1 RefSeq gene 8841 9545 . + . ID=gene-IY40_RS23550;Name=rplA;gbkey=Gene;gene=rplA;gene_biotype=protein_coding;locus_tag=IY40_RS23550;old_locus_tag=IY40_23995 NZ_JPQY01000051.1 Protein Homology CDS 8841 9545 . + 0 ID=cds-WP_019456443.1;Parent=gene-IY40_RS23550;Dbxref=GenBank:WP_019456443.1;Name=WP_019456443.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0015934;gbkey=CDS;gene=rplA;go_component=large ribosomal subunit|0015934||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312934.1;locus_tag=IY40_RS23550;product=50S ribosomal protein L1;protein_id=WP_019456443.1;transl_table=11 NZ_JPQY01000051.1 RefSeq gene 9884 10381 . + . ID=gene-IY40_RS23555;Name=rplJ;gbkey=Gene;gene=rplJ;gene_biotype=protein_coding;locus_tag=IY40_RS23555;old_locus_tag=IY40_24000 NZ_JPQY01000051.1 Protein Homology CDS 9884 10381 . + 0 ID=cds-WP_004929905.1;Parent=gene-IY40_RS23555;Dbxref=GenBank:WP_004929905.1;Name=WP_004929905.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplJ;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002438625.1;locus_tag=IY40_RS23555;product=50S ribosomal protein L10;protein_id=WP_004929905.1;transl_table=11 NZ_JPQY01000051.1 RefSeq gene 10445 10810 . + . ID=gene-IY40_RS23560;Name=rplL;gbkey=Gene;gene=rplL;gene_biotype=protein_coding;locus_tag=IY40_RS23560;old_locus_tag=IY40_24005 NZ_JPQY01000051.1 Protein Homology CDS 10445 10810 . + 0 ID=cds-WP_004929903.1;Parent=gene-IY40_RS23560;Dbxref=GenBank:WP_004929903.1;Name=WP_004929903.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplL;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122872.1;locus_tag=IY40_RS23560;product=50S ribosomal protein L7/L12;protein_id=WP_004929903.1;transl_table=11 NZ_JPQY01000051.1 RefSeq gene 11143 15171 . + . ID=gene-IY40_RS23565;Name=rpoB;gbkey=Gene;gene=rpoB;gene_biotype=protein_coding;locus_tag=IY40_RS23565;old_locus_tag=IY40_24010 NZ_JPQY01000051.1 Protein Homology CDS 11143 15171 . + 0 ID=cds-WP_025304938.1;Parent=gene-IY40_RS23565;Dbxref=GenBank:WP_025304938.1;Name=WP_025304938.1;Ontology_term=GO:0006351,GO:0003677,GO:0003899;gbkey=CDS;gene=rpoB;go_function=DNA binding|0003677||IEA,DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004870488.1;locus_tag=IY40_RS23565;product=DNA-directed RNA polymerase subunit beta;protein_id=WP_025304938.1;transl_table=11 NZ_JPQY01000051.1 RefSeq gene 15290 19513 . + . ID=gene-IY40_RS23570;Name=rpoC;gbkey=Gene;gene=rpoC;gene_biotype=protein_coding;locus_tag=IY40_RS23570;old_locus_tag=IY40_24015 NZ_JPQY01000051.1 Protein Homology CDS 15290 19513 . + 0 ID=cds-WP_025304939.1;Parent=gene-IY40_RS23570;Dbxref=GenBank:WP_025304939.1;Name=WP_025304939.1;Ontology_term=GO:0006351,GO:0003677,GO:0003899;gbkey=CDS;gene=rpoC;go_function=DNA binding|0003677||IEA,DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012004745.1;locus_tag=IY40_RS23570;product=DNA-directed RNA polymerase subunit beta';protein_id=WP_025304939.1;transl_table=11 NZ_JPQY01000051.1 RefSeq gene 19682 20128 . + . ID=gene-IY40_RS23575;Name=IY40_RS23575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS23575;old_locus_tag=IY40_24020 NZ_JPQY01000051.1 Protein Homology CDS 19682 20128 . + 0 ID=cds-WP_025304940.1;Parent=gene-IY40_RS23575;Dbxref=GenBank:WP_025304940.1;Name=WP_025304940.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019456441.1;locus_tag=IY40_RS23575;product=GNAT family N-acetyltransferase;protein_id=WP_025304940.1;transl_table=11 NZ_JPQY01000051.1 RefSeq gene 20128 20592 . + . ID=gene-IY40_RS23580;Name=IY40_RS23580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS23580;old_locus_tag=IY40_24025 NZ_JPQY01000051.1 Protein Homology CDS 20128 20592 . + 0 ID=cds-WP_043143693.1;Parent=gene-IY40_RS23580;Dbxref=GenBank:WP_043143693.1;Name=WP_043143693.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004929895.1;locus_tag=IY40_RS23580;product=putative pterin-binding protein;protein_id=WP_043143693.1;transl_table=11 NZ_JPQY01000051.1 RefSeq gene 20594 21868 . + . ID=gene-IY40_RS23585;Name=IY40_RS23585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS23585;old_locus_tag=IY40_24030 NZ_JPQY01000051.1 Protein Homology CDS 20594 21868 . + 0 ID=cds-WP_043143681.1;Parent=gene-IY40_RS23585;Dbxref=GenBank:WP_043143681.1;Name=WP_043143681.1;Ontology_term=GO:0007165,GO:0000155,GO:0004673,GO:0005524;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019456439.1;locus_tag=IY40_RS23585;product=sensor histidine kinase;protein_id=WP_043143681.1;transl_table=11 NZ_JPQY01000051.1 RefSeq gene 21854 22549 . - . ID=gene-IY40_RS23590;Name=IY40_RS23590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS23590;old_locus_tag=IY40_24035 NZ_JPQY01000051.1 Protein Homology CDS 21854 22549 . - 0 ID=cds-WP_235211391.1;Parent=gene-IY40_RS23590;Dbxref=GenBank:WP_235211391.1;Name=WP_235211391.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004929890.1;locus_tag=IY40_RS23590;product=helix-turn-helix domain-containing protein;protein_id=WP_235211391.1;transl_table=11 NZ_JPQY01000051.1 RefSeq gene 23374 24507 . - . ID=gene-IY40_RS23595;Name=thiH;gbkey=Gene;gene=thiH;gene_biotype=protein_coding;locus_tag=IY40_RS23595;old_locus_tag=IY40_24040 NZ_JPQY01000051.1 Protein Homology CDS 23374 24507 . - 0 ID=cds-WP_043143695.1;Parent=gene-IY40_RS23595;Dbxref=GenBank:WP_043143695.1;Name=WP_043143695.1;Ontology_term=GO:0009228,GO:0005506,GO:0016829,GO:0051539,GO:1904047;gbkey=CDS;gene=thiH;go_function=iron ion binding|0005506||IEA,lyase activity|0016829||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210678.1;locus_tag=IY40_RS23595;product=2-iminoacetate synthase ThiH;protein_id=WP_043143695.1;transl_table=11 NZ_JPQY01000051.1 RefSeq gene 24507 25286 . - . ID=gene-IY40_RS23600;Name=IY40_RS23600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS23600;old_locus_tag=IY40_24045 NZ_JPQY01000051.1 Protein Homology CDS 24507 25286 . - 0 ID=cds-WP_033652706.1;Parent=gene-IY40_RS23600;Dbxref=GenBank:WP_033652706.1;Name=WP_033652706.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016929424.1;locus_tag=IY40_RS23600;product=thiazole synthase;protein_id=WP_033652706.1;transl_table=11 NZ_JPQY01000051.1 RefSeq gene 25288 25488 . - . ID=gene-IY40_RS23605;Name=thiS;gbkey=Gene;gene=thiS;gene_biotype=protein_coding;locus_tag=IY40_RS23605;old_locus_tag=IY40_24050 NZ_JPQY01000051.1 Protein Homology CDS 25288 25488 . - 0 ID=cds-WP_016929423.1;Parent=gene-IY40_RS23605;Dbxref=GenBank:WP_016929423.1;Name=WP_016929423.1;Ontology_term=GO:0009228,GO:0003824;gbkey=CDS;gene=thiS;go_function=catalytic activity|0003824||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004953956.1;locus_tag=IY40_RS23605;product=sulfur carrier protein ThiS;protein_id=WP_016929423.1;transl_table=11 NZ_JPQY01000051.1 RefSeq gene 25485 26234 . - . ID=gene-IY40_RS23610;Name=IY40_RS23610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS23610;old_locus_tag=IY40_24055 NZ_JPQY01000051.1 Protein Homology CDS 25485 26234 . - 0 ID=cds-WP_043143683.1;Parent=gene-IY40_RS23610;Dbxref=GenBank:WP_043143683.1;Name=WP_043143683.1;Ontology_term=GO:0016779;gbkey=CDS;go_function=nucleotidyltransferase activity|0016779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015376324.1;locus_tag=IY40_RS23610;product=HesA/MoeB/ThiF family protein;protein_id=WP_043143683.1;transl_table=11 NZ_JPQY01000051.1 RefSeq gene 26227 26877 . - . ID=gene-IY40_RS23615;Name=thiE;gbkey=Gene;gene=thiE;gene_biotype=protein_coding;locus_tag=IY40_RS23615;old_locus_tag=IY40_24060 NZ_JPQY01000051.1 Protein Homology CDS 26227 26877 . - 0 ID=cds-WP_043143686.1;Parent=gene-IY40_RS23615;Dbxref=GenBank:WP_043143686.1;Name=WP_043143686.1;Ontology_term=GO:0009228,GO:0004789;gbkey=CDS;gene=thiE;go_function=thiamine-phosphate diphosphorylase activity|0004789||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019456433.1;locus_tag=IY40_RS23615;product=thiamine phosphate synthase;protein_id=WP_043143686.1;transl_table=11 NZ_JPQY01000051.1 RefSeq gene 26870 28813 . - . ID=gene-IY40_RS23620;Name=thiC;gbkey=Gene;gene=thiC;gene_biotype=protein_coding;locus_tag=IY40_RS23620;old_locus_tag=IY40_24065 NZ_JPQY01000051.1 Protein Homology CDS 26870 28813 . - 0 ID=cds-WP_043143687.1;Parent=gene-IY40_RS23620;Dbxref=GenBank:WP_043143687.1;Name=WP_043143687.1;Ontology_term=GO:0009228,GO:0051536;gbkey=CDS;gene=thiC;go_function=iron-sulfur cluster binding|0051536||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016929421.1;locus_tag=IY40_RS23620;product=phosphomethylpyrimidine synthase ThiC;protein_id=WP_043143687.1;transl_table=11 NZ_JPQY01000051.1 cmsearch riboswitch 28928 29052 . - . ID=id-NZ_JPQY01000051.1:28928..29052;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_JPQY01000051.1 RefSeq gene 29092 29595 . - . ID=gene-IY40_RS23625;Name=IY40_RS23625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS23625;old_locus_tag=IY40_24070 NZ_JPQY01000051.1 Protein Homology CDS 29092 29595 . - 0 ID=cds-WP_016929420.1;Parent=gene-IY40_RS23625;Dbxref=GenBank:WP_016929420.1;Name=WP_016929420.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019456431.1;locus_tag=IY40_RS23625;product=Rsd/AlgQ family anti-sigma factor;protein_id=WP_016929420.1;transl_table=11 NZ_JPQY01000051.1 RefSeq gene 29697 30464 . + . ID=gene-IY40_RS23630;Name=nudC;gbkey=Gene;gene=nudC;gene_biotype=protein_coding;locus_tag=IY40_RS23630;old_locus_tag=IY40_24075 NZ_JPQY01000051.1 Protein Homology CDS 29697 30464 . + 0 ID=cds-WP_025304948.1;Parent=gene-IY40_RS23630;Dbxref=GenBank:WP_025304948.1;Name=WP_025304948.1;Ontology_term=GO:0000210,GO:0016787;gbkey=CDS;gene=nudC;go_function=NAD+ diphosphatase activity|0000210||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006323154.1;locus_tag=IY40_RS23630;product=NAD(+) diphosphatase;protein_id=WP_025304948.1;transl_table=11 NZ_JPQY01000051.1 RefSeq gene 30503 31567 . + . ID=gene-IY40_RS23635;Name=hemE;gbkey=Gene;gene=hemE;gene_biotype=protein_coding;locus_tag=IY40_RS23635;old_locus_tag=IY40_24080 NZ_JPQY01000051.1 Protein Homology CDS 30503 31567 . + 0 ID=cds-WP_025304949.1;Parent=gene-IY40_RS23635;Dbxref=GenBank:WP_025304949.1;Name=WP_025304949.1;Ontology_term=GO:0006779,GO:0004853;gbkey=CDS;gene=hemE;go_function=uroporphyrinogen decarboxylase activity|0004853||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312947.1;locus_tag=IY40_RS23635;product=uroporphyrinogen decarboxylase;protein_id=WP_025304949.1;transl_table=11 NZ_JPQY01000051.1 RefSeq gene 31577 32263 . + . ID=gene-IY40_RS23640;Name=nfi;gbkey=Gene;gene=nfi;gene_biotype=protein_coding;locus_tag=IY40_RS23640;old_locus_tag=IY40_24085 NZ_JPQY01000051.1 Protein Homology CDS 31577 32263 . + 0 ID=cds-WP_043143689.1;Parent=gene-IY40_RS23640;Dbxref=GenBank:WP_043143689.1;Name=WP_043143689.1;Note=cleaves DNA at apurinic or apyrimidinic sites;Ontology_term=GO:0006281,GO:0004519;gbkey=CDS;gene=nfi;go_function=endonuclease activity|0004519||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012004755.1;locus_tag=IY40_RS23640;product=deoxyribonuclease V;protein_id=WP_043143689.1;transl_table=11 NZ_JPQY01000051.1 RefSeq gene 32312 32902 . + . ID=gene-IY40_RS23645;Name=IY40_RS23645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS23645;old_locus_tag=IY40_24090 NZ_JPQY01000051.1 Protein Homology CDS 32312 32902 . + 0 ID=cds-WP_025304951.1;Parent=gene-IY40_RS23645;Dbxref=GenBank:WP_025304951.1;Name=WP_025304951.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004957783.1;locus_tag=IY40_RS23645;product=YjaG family protein;protein_id=WP_025304951.1;transl_table=11 NZ_JPQY01000051.1 RefSeq gene 33092 33364 . + . ID=gene-IY40_RS23650;Name=hupA;gbkey=Gene;gene=hupA;gene_biotype=protein_coding;locus_tag=IY40_RS23650;old_locus_tag=IY40_24095 NZ_JPQY01000051.1 Protein Homology CDS 33092 33364 . + 0 ID=cds-WP_004929874.1;Parent=gene-IY40_RS23650;Dbxref=GenBank:WP_004929874.1;Name=WP_004929874.1;gbkey=CDS;gene=hupA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017460010.1;locus_tag=IY40_RS23650;product=nucleoid-associated protein HU-alpha;protein_id=WP_004929874.1;transl_table=11 NZ_JPQY01000051.1 RefSeq gene 33401 34072 . + . ID=gene-IY40_RS23655;Name=IY40_RS23655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS23655;old_locus_tag=IY40_24100 NZ_JPQY01000051.1 Protein Homology CDS 33401 34072 . + 0 ID=cds-WP_080271274.1;Parent=gene-IY40_RS23655;Dbxref=GenBank:WP_080271274.1;Name=WP_080271274.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013811140.1;locus_tag=IY40_RS23655;product=DUF1481 domain-containing protein;protein_id=WP_080271274.1;transl_table=11 NZ_JPQY01000051.1 RefSeq gene 34122 35405 . - . ID=gene-IY40_RS23660;Name=purD;gbkey=Gene;gene=purD;gene_biotype=protein_coding;locus_tag=IY40_RS23660;old_locus_tag=IY40_24105 NZ_JPQY01000051.1 Protein Homology CDS 34122 35405 . - 0 ID=cds-WP_015376331.1;Parent=gene-IY40_RS23660;Dbxref=GenBank:WP_015376331.1;Name=WP_015376331.1;Ontology_term=GO:0009113,GO:0004637;gbkey=CDS;gene=purD;go_function=phosphoribosylamine-glycine ligase activity|0004637||IEA;go_process=purine nucleobase biosynthetic process|0009113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004716493.1;locus_tag=IY40_RS23660;product=phosphoribosylamine--glycine ligase;protein_id=WP_015376331.1;transl_table=11 NZ_JPQY01000051.1 RefSeq gene 35454 37043 . - . ID=gene-IY40_RS23665;Name=purH;gbkey=Gene;gene=purH;gene_biotype=protein_coding;locus_tag=IY40_RS23665;old_locus_tag=IY40_24110 NZ_JPQY01000051.1 Protein Homology CDS 35454 37043 . - 0 ID=cds-WP_089181545.1;Parent=gene-IY40_RS23665;Dbxref=GenBank:WP_089181545.1;Name=WP_089181545.1;Ontology_term=GO:0009152,GO:0003937,GO:0004643;gbkey=CDS;gene=purH;go_function=IMP cyclohydrolase activity|0003937||IEA,phosphoribosylaminoimidazolecarboxamide formyltransferase activity|0004643||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132841.1;locus_tag=IY40_RS23665;product=bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase;protein_id=WP_089181545.1;transl_table=11 NZ_JPQY01000051.1 RefSeq gene 37681 37777 . + . ID=gene-IY40_RS23670;Name=IY40_RS23670;end_range=37777,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=IY40_RS23670;old_locus_tag=IY40_24115;partial=true NZ_JPQY01000051.1 cmsearch rRNA 37681 37777 . + . ID=rna-IY40_RS23670;Parent=gene-IY40_RS23670;Dbxref=RFAM:RF00177;end_range=37777,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=IY40_RS23670;partial=true;product=16S ribosomal RNA NZ_JPQY01000051.1 cmsearch exon 37681 37777 . + . ID=exon-IY40_RS23670-1;Parent=rna-IY40_RS23670;Dbxref=RFAM:RF00177;end_range=37777,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=IY40_RS23670;partial=true;product=16S ribosomal RNA ##sequence-region NZ_JPQY01000052.1 1 8693 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=615 NZ_JPQY01000052.1 RefSeq region 1 8693 . + . ID=NZ_JPQY01000052.1:1..8693;Dbxref=taxon:615;collected-by=Mahloro H. Serepa%3B Vincent M. Gray;collection-date=2013-04-11;country=South Africa: North West Province;gbkey=Src;genome=genomic;identified-by=Mahloro H. Serepa%3B Vincent M. Gray;isolation-source=entomopathogenic nematode Oscheius sp. MCB living in soil;mol_type=genomic DNA;nat-host=Oscheius sp. MCB;strain=MCB NZ_JPQY01000052.1 RefSeq gene 1 580 . + . ID=gene-IY40_RS23680;Name=IY40_RS23680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS23680;partial=true;start_range=.,1 NZ_JPQY01000052.1 Protein Homology CDS 1 580 . + 1 ID=cds-WP_043143701.1;Parent=gene-IY40_RS23680;Dbxref=GenBank:WP_043143701.1;Name=WP_043143701.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012004790.1;locus_tag=IY40_RS23680;partial=true;product=transglycosylase SLT domain-containing protein;protein_id=WP_043143701.1;start_range=.,1;transl_table=11 NZ_JPQY01000052.1 RefSeq gene 583 1107 . + . ID=gene-IY40_RS23685;Name=IY40_RS23685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS23685;old_locus_tag=IY40_24130 NZ_JPQY01000052.1 Protein Homology CDS 583 1107 . + 0 ID=cds-WP_043143703.1;Parent=gene-IY40_RS23685;Dbxref=GenBank:WP_043143703.1;Name=WP_043143703.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016191737.1;locus_tag=IY40_RS23685;product=integrating conjugative element protein;protein_id=WP_043143703.1;transl_table=11 NZ_JPQY01000052.1 RefSeq gene 1104 1730 . + . ID=gene-IY40_RS23690;Name=IY40_RS23690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS23690;old_locus_tag=IY40_24135 NZ_JPQY01000052.1 Protein Homology CDS 1104 1730 . + 0 ID=cds-WP_043143706.1;Parent=gene-IY40_RS23690;Dbxref=GenBank:WP_043143706.1;Name=WP_043143706.1;Ontology_term=GO:0003677,GO:0004519;gbkey=CDS;go_function=DNA binding|0003677||IEA,endonuclease activity|0004519||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013060267.1;locus_tag=IY40_RS23690;product=restriction endonuclease;protein_id=WP_043143706.1;transl_table=11 NZ_JPQY01000052.1 RefSeq gene 1723 3837 . + . ID=gene-IY40_RS23695;Name=traD;gbkey=Gene;gene=traD;gene_biotype=protein_coding;locus_tag=IY40_RS23695;old_locus_tag=IY40_24140 NZ_JPQY01000052.1 Protein Homology CDS 1723 3837 . + 0 ID=cds-WP_043143708.1;Parent=gene-IY40_RS23695;Dbxref=GenBank:WP_043143708.1;Name=WP_043143708.1;gbkey=CDS;gene=traD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013060269.1;locus_tag=IY40_RS23695;product=type IV conjugative transfer system coupling protein TraD;protein_id=WP_043143708.1;transl_table=11 NZ_JPQY01000052.1 RefSeq gene 3818 4576 . + . ID=gene-IY40_RS23700;Name=IY40_RS23700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS23700;old_locus_tag=IY40_24145 NZ_JPQY01000052.1 Protein Homology CDS 3818 4576 . + 0 ID=cds-WP_043143710.1;Parent=gene-IY40_RS23700;Dbxref=GenBank:WP_043143710.1;Name=WP_043143710.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013811169.1;locus_tag=IY40_RS23700;product=TIGR03747 family integrating conjugative element membrane protein;protein_id=WP_043143710.1;transl_table=11 NZ_JPQY01000052.1 RefSeq gene 4665 5219 . - . ID=gene-IY40_RS23705;Name=IY40_RS23705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS23705;old_locus_tag=IY40_24150 NZ_JPQY01000052.1 GeneMarkS-2+ CDS 4665 5219 . - 0 ID=cds-WP_043143712.1;Parent=gene-IY40_RS23705;Dbxref=GenBank:WP_043143712.1;Name=WP_043143712.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IY40_RS23705;product=hypothetical protein;protein_id=WP_043143712.1;transl_table=11 NZ_JPQY01000052.1 RefSeq gene 5375 5704 . + . ID=gene-IY40_RS23710;Name=IY40_RS23710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS23710;old_locus_tag=IY40_24155 NZ_JPQY01000052.1 Protein Homology CDS 5375 5704 . + 0 ID=cds-WP_043143714.1;Parent=gene-IY40_RS23710;Dbxref=GenBank:WP_043143714.1;Name=WP_043143714.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016191732.1;locus_tag=IY40_RS23710;product=integrative conjugative element protein%2C RAQPRD family;protein_id=WP_043143714.1;transl_table=11 NZ_JPQY01000052.1 RefSeq gene 5704 5946 . + . ID=gene-IY40_RS23715;Name=IY40_RS23715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS23715;old_locus_tag=IY40_24160 NZ_JPQY01000052.1 Protein Homology CDS 5704 5946 . + 0 ID=cds-WP_043143717.1;Parent=gene-IY40_RS23715;Dbxref=GenBank:WP_043143717.1;Name=WP_043143717.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016260100.1;locus_tag=IY40_RS23715;product=TIGR03758 family integrating conjugative element protein;protein_id=WP_043143717.1;transl_table=11 NZ_JPQY01000052.1 RefSeq gene 6010 6375 . + . ID=gene-IY40_RS23720;Name=IY40_RS23720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS23720;old_locus_tag=IY40_24165 NZ_JPQY01000052.1 Protein Homology CDS 6010 6375 . + 0 ID=cds-WP_043143719.1;Parent=gene-IY40_RS23720;Dbxref=GenBank:WP_043143719.1;Name=WP_043143719.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013060272.1;locus_tag=IY40_RS23720;product=TIGR03745 family integrating conjugative element membrane protein;protein_id=WP_043143719.1;transl_table=11 NZ_JPQY01000052.1 RefSeq gene 6387 6752 . + . ID=gene-IY40_RS23725;Name=IY40_RS23725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS23725;old_locus_tag=IY40_24170 NZ_JPQY01000052.1 Protein Homology CDS 6387 6752 . + 0 ID=cds-WP_012146873.1;Parent=gene-IY40_RS23725;Dbxref=GenBank:WP_012146873.1;Name=WP_012146873.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012146873.1;locus_tag=IY40_RS23725;product=TIGR03750 family conjugal transfer protein;protein_id=WP_012146873.1;transl_table=11 NZ_JPQY01000052.1 RefSeq gene 6749 7420 . + . ID=gene-IY40_RS23730;Name=IY40_RS23730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS23730;old_locus_tag=IY40_24175 NZ_JPQY01000052.1 Protein Homology CDS 6749 7420 . + 0 ID=cds-WP_043143723.1;Parent=gene-IY40_RS23730;Dbxref=GenBank:WP_043143723.1;Name=WP_043143723.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012146792.1;locus_tag=IY40_RS23730;product=PFL_4703 family integrating conjugative element protein;protein_id=WP_043143723.1;transl_table=11 NZ_JPQY01000052.1 RefSeq gene 7417 8325 . + . ID=gene-IY40_RS23735;Name=IY40_RS23735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS23735;old_locus_tag=IY40_24180 NZ_JPQY01000052.1 Protein Homology CDS 7417 8325 . + 0 ID=cds-WP_043143725.1;Parent=gene-IY40_RS23735;Dbxref=GenBank:WP_043143725.1;Name=WP_043143725.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013811174.1;locus_tag=IY40_RS23735;product=TIGR03749 family integrating conjugative element protein;protein_id=WP_043143725.1;transl_table=11 NZ_JPQY01000052.1 RefSeq pseudogene 8318 8693 . + . ID=gene-IY40_RS23740;Name=IY40_RS23740;end_range=8693,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IY40_RS23740;old_locus_tag=IY40_24185;partial=true;pseudo=true NZ_JPQY01000052.1 Protein Homology CDS 8318 8693 . + 0 ID=cds-IY40_RS23740;Parent=gene-IY40_RS23740;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=8693,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013811175.1;locus_tag=IY40_RS23740;partial=true;product=TIGR03752 family integrating conjugative element protein;pseudo=true;transl_table=11 ##sequence-region NZ_JPQY01000053.1 1 4629 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=615 NZ_JPQY01000053.1 RefSeq region 1 4629 . + . ID=NZ_JPQY01000053.1:1..4629;Dbxref=taxon:615;collected-by=Mahloro H. Serepa%3B Vincent M. Gray;collection-date=2013-04-11;country=South Africa: North West Province;gbkey=Src;genome=genomic;identified-by=Mahloro H. Serepa%3B Vincent M. Gray;isolation-source=entomopathogenic nematode Oscheius sp. MCB living in soil;mol_type=genomic DNA;nat-host=Oscheius sp. MCB;strain=MCB NZ_JPQY01000053.1 RefSeq gene 1 2146 . + . ID=gene-IY40_RS23745;Name=IY40_RS23745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS23745;old_locus_tag=IY40_24190;partial=true;start_range=.,1 NZ_JPQY01000053.1 Protein Homology CDS 1 2146 . + 1 ID=cds-WP_043143731.1;Parent=gene-IY40_RS23745;Dbxref=GenBank:WP_043143731.1;Name=WP_043143731.1;Ontology_term=GO:0016051;gbkey=CDS;go_process=carbohydrate biosynthetic process|0016051||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004965274.1;locus_tag=IY40_RS23745;partial=true;product=N-acetylneuraminate synthase family protein;protein_id=WP_043143731.1;start_range=.,1;transl_table=11 NZ_JPQY01000053.1 RefSeq gene 2147 3385 . + . ID=gene-IY40_RS23750;Name=IY40_RS23750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS23750;old_locus_tag=IY40_24195 NZ_JPQY01000053.1 Protein Homology CDS 2147 3385 . + 0 ID=cds-WP_043143733.1;Parent=gene-IY40_RS23750;Dbxref=GenBank:WP_043143733.1;Name=WP_043143733.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004965270.1;locus_tag=IY40_RS23750;product=oligosaccharide flippase family protein;protein_id=WP_043143733.1;transl_table=11 NZ_JPQY01000053.1 RefSeq gene 3382 3888 . + . ID=gene-IY40_RS25570;Name=IY40_RS25570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS25570 NZ_JPQY01000053.1 Protein Homology CDS 3382 3888 . + 0 ID=cds-WP_072008281.1;Parent=gene-IY40_RS25570;Dbxref=GenBank:WP_072008281.1;Name=WP_072008281.1;Ontology_term=GO:0046677,GO:0016746,GO:0120225;gbkey=CDS;go_function=acyltransferase activity|0016746||IEA,coenzyme A binding|0120225||IEA;go_process=response to antibiotic|0046677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004965267.1;locus_tag=IY40_RS25570;product=acyltransferase;protein_id=WP_072008281.1;transl_table=11 NZ_JPQY01000053.1 RefSeq gene 3941 4629 . + . ID=gene-IY40_RS23755;Name=IY40_RS23755;end_range=4629,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS23755;old_locus_tag=IY40_24205;partial=true NZ_JPQY01000053.1 Protein Homology CDS 3941 4629 . + 0 ID=cds-WP_043143736.1;Parent=gene-IY40_RS23755;Dbxref=GenBank:WP_043143736.1;Name=WP_043143736.1;end_range=4629,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016928427.1;locus_tag=IY40_RS23755;partial=true;product=polysialyltransferase family glycosyltransferase;protein_id=WP_043143736.1;transl_table=11 ##sequence-region NZ_JPQY01000054.1 1 9980 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=615 NZ_JPQY01000054.1 RefSeq region 1 9980 . + . ID=NZ_JPQY01000054.1:1..9980;Dbxref=taxon:615;collected-by=Mahloro H. Serepa%3B Vincent M. Gray;collection-date=2013-04-11;country=South Africa: North West Province;gbkey=Src;genome=genomic;identified-by=Mahloro H. Serepa%3B Vincent M. Gray;isolation-source=entomopathogenic nematode Oscheius sp. MCB living in soil;mol_type=genomic DNA;nat-host=Oscheius sp. MCB;strain=MCB NZ_JPQY01000054.1 RefSeq gene 352 1158 . - . ID=gene-IY40_RS23760;Name=IY40_RS23760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS23760;old_locus_tag=IY40_24215 NZ_JPQY01000054.1 Protein Homology CDS 352 1158 . - 0 ID=cds-WP_043143741.1;Parent=gene-IY40_RS23760;Dbxref=GenBank:WP_043143741.1;Name=WP_043143741.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004936408.1;locus_tag=IY40_RS23760;product=ABC transporter ATP-binding protein;protein_id=WP_043143741.1;transl_table=11 NZ_JPQY01000054.1 RefSeq gene 1176 2213 . - . ID=gene-IY40_RS23765;Name=fepG;gbkey=Gene;gene=fepG;gene_biotype=protein_coding;locus_tag=IY40_RS23765;old_locus_tag=IY40_24220 NZ_JPQY01000054.1 Protein Homology CDS 1176 2213 . - 0 ID=cds-WP_025303767.1;Parent=gene-IY40_RS23765;Dbxref=GenBank:WP_025303767.1;Name=WP_025303767.1;Ontology_term=GO:0022857;gbkey=CDS;gene=fepG;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016926800.1;locus_tag=IY40_RS23765;product=iron-enterobactin ABC transporter permease;protein_id=WP_025303767.1;transl_table=11 NZ_JPQY01000054.1 RefSeq gene 2213 3268 . - . ID=gene-IY40_RS23770;Name=fepD;gbkey=Gene;gene=fepD;gene_biotype=protein_coding;locus_tag=IY40_RS23770;old_locus_tag=IY40_24225 NZ_JPQY01000054.1 Protein Homology CDS 2213 3268 . - 0 ID=cds-WP_043143743.1;Parent=gene-IY40_RS23770;Dbxref=GenBank:WP_043143743.1;Name=WP_043143743.1;Ontology_term=GO:0022857,GO:0016020;gbkey=CDS;gene=fepD;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016926801.1;locus_tag=IY40_RS23770;product=Fe(3+)-siderophore ABC transporter permease;protein_id=WP_043143743.1;transl_table=11 NZ_JPQY01000054.1 RefSeq gene 3484 4491 . - . ID=gene-IY40_RS23775;Name=fepB;gbkey=Gene;gene=fepB;gene_biotype=protein_coding;locus_tag=IY40_RS23775;old_locus_tag=IY40_24230 NZ_JPQY01000054.1 Protein Homology CDS 3484 4491 . - 0 ID=cds-WP_043143745.1;Parent=gene-IY40_RS23775;Dbxref=GenBank:WP_043143745.1;Name=WP_043143745.1;gbkey=CDS;gene=fepB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004936399.1;locus_tag=IY40_RS23775;product=Fe2+-enterobactin ABC transporter substrate-binding protein;protein_id=WP_043143745.1;transl_table=11 NZ_JPQY01000054.1 RefSeq gene 4699 4823 . - . ID=gene-IY40_RS25575;Name=IY40_RS25575;gbkey=Gene;gene_biotype=ncRNA;locus_tag=IY40_RS25575;old_locus_tag=IY40_24280 NZ_JPQY01000054.1 cmsearch ncRNA 4699 4823 . - . ID=rna-IY40_RS25575;Parent=gene-IY40_RS25575;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=IY40_RS25575;product=RtT sRNA NZ_JPQY01000054.1 cmsearch exon 4699 4823 . - . ID=exon-IY40_RS25575-1;Parent=rna-IY40_RS25575;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=IY40_RS25575;product=RtT sRNA NZ_JPQY01000054.1 RefSeq gene 4899 4974 . - . ID=gene-IY40_RS23780;Name=IY40_RS23780;gbkey=Gene;gene_biotype=tRNA;locus_tag=IY40_RS23780;old_locus_tag=IY40_24235 NZ_JPQY01000054.1 tRNAscan-SE tRNA 4899 4974 . - . ID=rna-IY40_RS23780;Parent=gene-IY40_RS23780;anticodon=(pos:complement(4939..4941));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=IY40_RS23780;product=tRNA-Lys NZ_JPQY01000054.1 tRNAscan-SE exon 4899 4974 . - . ID=exon-IY40_RS23780-1;Parent=rna-IY40_RS23780;anticodon=(pos:complement(4939..4941));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=IY40_RS23780;product=tRNA-Lys NZ_JPQY01000054.1 RefSeq gene 4982 5057 . - . ID=gene-IY40_RS23785;Name=IY40_RS23785;gbkey=Gene;gene_biotype=tRNA;locus_tag=IY40_RS23785;old_locus_tag=IY40_24240 NZ_JPQY01000054.1 tRNAscan-SE tRNA 4982 5057 . - . ID=rna-IY40_RS23785;Parent=gene-IY40_RS23785;anticodon=(pos:complement(5022..5024));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=IY40_RS23785;product=tRNA-Val NZ_JPQY01000054.1 tRNAscan-SE exon 4982 5057 . - . ID=exon-IY40_RS23785-1;Parent=rna-IY40_RS23785;anticodon=(pos:complement(5022..5024));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=IY40_RS23785;product=tRNA-Val NZ_JPQY01000054.1 RefSeq gene 5096 5171 . - . ID=gene-IY40_RS23790;Name=IY40_RS23790;gbkey=Gene;gene_biotype=tRNA;locus_tag=IY40_RS23790;old_locus_tag=IY40_24245 NZ_JPQY01000054.1 tRNAscan-SE tRNA 5096 5171 . - . ID=rna-IY40_RS23790;Parent=gene-IY40_RS23790;anticodon=(pos:complement(5136..5138));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=IY40_RS23790;product=tRNA-Val NZ_JPQY01000054.1 tRNAscan-SE exon 5096 5171 . - . ID=exon-IY40_RS23790-1;Parent=rna-IY40_RS23790;anticodon=(pos:complement(5136..5138));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=IY40_RS23790;product=tRNA-Val NZ_JPQY01000054.1 RefSeq gene 5200 5275 . - . ID=gene-IY40_RS23795;Name=IY40_RS23795;gbkey=Gene;gene_biotype=tRNA;locus_tag=IY40_RS23795;old_locus_tag=IY40_24250 NZ_JPQY01000054.1 tRNAscan-SE tRNA 5200 5275 . - . ID=rna-IY40_RS23795;Parent=gene-IY40_RS23795;anticodon=(pos:complement(5240..5242));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=IY40_RS23795;product=tRNA-Val NZ_JPQY01000054.1 tRNAscan-SE exon 5200 5275 . - . ID=exon-IY40_RS23795-1;Parent=rna-IY40_RS23795;anticodon=(pos:complement(5240..5242));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=IY40_RS23795;product=tRNA-Val NZ_JPQY01000054.1 RefSeq gene 5570 6985 . + . ID=gene-IY40_RS23800;Name=gltX;gbkey=Gene;gene=gltX;gene_biotype=protein_coding;locus_tag=IY40_RS23800;old_locus_tag=IY40_24255 NZ_JPQY01000054.1 Protein Homology CDS 5570 6985 . + 0 ID=cds-WP_025303764.1;Parent=gene-IY40_RS23800;Dbxref=GenBank:WP_025303764.1;Name=WP_025303764.1;Ontology_term=GO:0006424,GO:0000166,GO:0004818,GO:0005524;gbkey=CDS;gene=gltX;go_function=nucleotide binding|0000166||IEA,glutamate-tRNA ligase activity|0004818||IEA,ATP binding|0005524||IEA;go_process=glutamyl-tRNA aminoacylation|0006424||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015378659.1;locus_tag=IY40_RS23800;product=glutamate--tRNA ligase;protein_id=WP_025303764.1;transl_table=11 NZ_JPQY01000054.1 RefSeq gene 7053 7838 . - . ID=gene-IY40_RS23805;Name=IY40_RS23805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS23805;old_locus_tag=IY40_24260 NZ_JPQY01000054.1 Protein Homology CDS 7053 7838 . - 0 ID=cds-WP_043143749.1;Parent=gene-IY40_RS23805;Dbxref=GenBank:WP_043143749.1;Name=WP_043143749.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004936376.1;locus_tag=IY40_RS23805;product=formate/nitrite transporter family protein;protein_id=WP_043143749.1;transl_table=11 NZ_JPQY01000054.1 RefSeq gene 8147 8222 . + . ID=gene-IY40_RS23810;Name=IY40_RS23810;gbkey=Gene;gene_biotype=tRNA;locus_tag=IY40_RS23810;old_locus_tag=IY40_24265 NZ_JPQY01000054.1 tRNAscan-SE tRNA 8147 8222 . + . ID=rna-IY40_RS23810;Parent=gene-IY40_RS23810;anticodon=(pos:8180..8182);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=IY40_RS23810;product=tRNA-Ala NZ_JPQY01000054.1 tRNAscan-SE exon 8147 8222 . + . ID=exon-IY40_RS23810-1;Parent=rna-IY40_RS23810;anticodon=(pos:8180..8182);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=IY40_RS23810;product=tRNA-Ala NZ_JPQY01000054.1 RefSeq gene 8283 8358 . + . ID=gene-IY40_RS23815;Name=IY40_RS23815;gbkey=Gene;gene_biotype=tRNA;locus_tag=IY40_RS23815;old_locus_tag=IY40_24270 NZ_JPQY01000054.1 tRNAscan-SE tRNA 8283 8358 . + . ID=rna-IY40_RS23815;Parent=gene-IY40_RS23815;anticodon=(pos:8316..8318);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=IY40_RS23815;product=tRNA-Ala NZ_JPQY01000054.1 tRNAscan-SE exon 8283 8358 . + . ID=exon-IY40_RS23815-1;Parent=rna-IY40_RS23815;anticodon=(pos:8316..8318);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=IY40_RS23815;product=tRNA-Ala NZ_JPQY01000054.1 RefSeq gene 8477 9664 . - . ID=gene-IY40_RS23820;Name=IY40_RS23820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS23820;old_locus_tag=IY40_24275 NZ_JPQY01000054.1 Protein Homology CDS 8477 9664 . - 0 ID=cds-WP_004936373.1;Parent=gene-IY40_RS23820;Dbxref=GenBank:WP_004936373.1;Name=WP_004936373.1;Ontology_term=GO:1901642,GO:0005337,GO:0015293,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=nucleoside transmembrane transporter activity|0005337||IEA,symporter activity|0015293||IEA;go_process=nucleoside transmembrane transport|1901642||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019453828.1;locus_tag=IY40_RS23820;product=NupC/NupG family nucleoside CNT transporter;protein_id=WP_004936373.1;transl_table=11 ##sequence-region NZ_JPQY01000055.1 1 4049 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=615 NZ_JPQY01000055.1 RefSeq region 1 4049 . + . ID=NZ_JPQY01000055.1:1..4049;Dbxref=taxon:615;collected-by=Mahloro H. Serepa%3B Vincent M. Gray;collection-date=2013-04-11;country=South Africa: North West Province;gbkey=Src;genome=genomic;identified-by=Mahloro H. Serepa%3B Vincent M. Gray;isolation-source=entomopathogenic nematode Oscheius sp. MCB living in soil;mol_type=genomic DNA;nat-host=Oscheius sp. MCB;strain=MCB NZ_JPQY01000055.1 RefSeq pseudogene 1 307 . + . ID=gene-IY40_RS26275;Name=IY40_RS26275;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IY40_RS26275;partial=true;pseudo=true;start_range=.,1 NZ_JPQY01000055.1 GeneMarkS-2+ CDS 1 307 . + 1 ID=cds-IY40_RS26275;Parent=gene-IY40_RS26275;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IY40_RS26275;partial=true;product=P-loop ATPase%2C Sll1717 family;pseudo=true;start_range=.,1;transl_table=11 NZ_JPQY01000055.1 RefSeq gene 667 1071 . + . ID=gene-IY40_RS23830;Name=IY40_RS23830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS23830;old_locus_tag=IY40_24285 NZ_JPQY01000055.1 Protein Homology CDS 667 1071 . + 0 ID=cds-WP_043143754.1;Parent=gene-IY40_RS23830;Dbxref=GenBank:WP_043143754.1;Name=WP_043143754.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016191721.1;locus_tag=IY40_RS23830;product=TIGR03757 family integrating conjugative element protein;protein_id=WP_043143754.1;transl_table=11 NZ_JPQY01000055.1 RefSeq gene 1073 2062 . + . ID=gene-IY40_RS23835;Name=IY40_RS23835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS23835;old_locus_tag=IY40_24290 NZ_JPQY01000055.1 Protein Homology CDS 1073 2062 . + 0 ID=cds-WP_043143756.1;Parent=gene-IY40_RS23835;Dbxref=GenBank:WP_043143756.1;Name=WP_043143756.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003029763.1;locus_tag=IY40_RS23835;product=TIGR03756 family integrating conjugative element protein;protein_id=WP_043143756.1;transl_table=11 NZ_JPQY01000055.1 RefSeq gene 2073 3554 . + . ID=gene-IY40_RS23840;Name=IY40_RS23840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS23840;old_locus_tag=IY40_24295 NZ_JPQY01000055.1 Protein Homology CDS 2073 3554 . + 0 ID=cds-WP_043143758.1;Parent=gene-IY40_RS23840;Dbxref=GenBank:WP_043143758.1;Name=WP_043143758.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012146862.1;locus_tag=IY40_RS23840;product=integrating conjugative element protein;protein_id=WP_043143758.1;transl_table=11 NZ_JPQY01000055.1 RefSeq gene 3571 3942 . + . ID=gene-IY40_RS23845;Name=IY40_RS23845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS23845;old_locus_tag=IY40_24300 NZ_JPQY01000055.1 Protein Homology CDS 3571 3942 . + 0 ID=cds-WP_043143761.1;Parent=gene-IY40_RS23845;Dbxref=GenBank:WP_043143761.1;Name=WP_043143761.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016260102.1;locus_tag=IY40_RS23845;product=hypothetical protein;protein_id=WP_043143761.1;transl_table=11 ##sequence-region NZ_JPQY01000056.1 1 1664 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=615 NZ_JPQY01000056.1 RefSeq region 1 1664 . + . ID=NZ_JPQY01000056.1:1..1664;Dbxref=taxon:615;collected-by=Mahloro H. Serepa%3B Vincent M. Gray;collection-date=2013-04-11;country=South Africa: North West Province;gbkey=Src;genome=genomic;identified-by=Mahloro H. Serepa%3B Vincent M. Gray;isolation-source=entomopathogenic nematode Oscheius sp. MCB living in soil;mol_type=genomic DNA;nat-host=Oscheius sp. MCB;strain=MCB NZ_JPQY01000056.1 RefSeq pseudogene 1 92 . + . ID=gene-IY40_RS26735;Name=IY40_RS26735;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IY40_RS26735;partial=true;pseudo=true;start_range=.,1 NZ_JPQY01000056.1 Protein Homology CDS 1 92 . + 2 ID=cds-IY40_RS26735;Parent=gene-IY40_RS26735;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013811162.1;locus_tag=IY40_RS26735;partial=true;product=pilus assembly protein PilL;pseudo=true;start_range=.,1;transl_table=11 NZ_JPQY01000056.1 RefSeq gene 89 832 . + . ID=gene-IY40_RS23850;Name=IY40_RS23850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS23850;old_locus_tag=IY40_24310 NZ_JPQY01000056.1 Protein Homology CDS 89 832 . + 0 ID=cds-WP_043143764.1;Parent=gene-IY40_RS23850;Dbxref=GenBank:WP_043143764.1;Name=WP_043143764.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012146803.1;locus_tag=IY40_RS23850;product=ATP synthase mitochondrial F1 complex assembly factor 1;protein_id=WP_043143764.1;transl_table=11 NZ_JPQY01000056.1 RefSeq gene 843 1553 . + . ID=gene-IY40_RS23855;Name=IY40_RS23855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS23855;old_locus_tag=IY40_24315 NZ_JPQY01000056.1 Protein Homology CDS 843 1553 . + 0 ID=cds-WP_043143766.1;Parent=gene-IY40_RS23855;Dbxref=GenBank:WP_043143766.1;Name=WP_043143766.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016191739.1;locus_tag=IY40_RS23855;product=TIGR03759 family integrating conjugative element protein;protein_id=WP_043143766.1;transl_table=11 ##sequence-region NZ_JPQY01000057.1 1 4582 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=615 NZ_JPQY01000057.1 RefSeq region 1 4582 . + . ID=NZ_JPQY01000057.1:1..4582;Dbxref=taxon:615;collected-by=Mahloro H. Serepa%3B Vincent M. Gray;collection-date=2013-04-11;country=South Africa: North West Province;gbkey=Src;genome=genomic;identified-by=Mahloro H. Serepa%3B Vincent M. Gray;isolation-source=entomopathogenic nematode Oscheius sp. MCB living in soil;mol_type=genomic DNA;nat-host=Oscheius sp. MCB;strain=MCB NZ_JPQY01000057.1 RefSeq gene 557 2596 . - . ID=gene-IY40_RS23860;Name=IY40_RS23860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS23860;old_locus_tag=IY40_24320 NZ_JPQY01000057.1 Protein Homology CDS 557 2596 . - 0 ID=cds-WP_043143773.1;Parent=gene-IY40_RS23860;Dbxref=GenBank:WP_043143773.1;Name=WP_043143773.1;Ontology_term=GO:0006261,GO:0006265,GO:0006310,GO:0051304,GO:0003677,GO:0003916,GO:0003917,GO:0098847;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA topoisomerase activity|0003916||IEA,DNA topoisomerase type I (single strand cut%2C ATP-independent) activity|0003917||IEA,sequence-specific single stranded DNA binding|0098847||IEA;go_process=DNA-templated DNA replication|0006261||IEA,DNA topological change|0006265||IEA,DNA recombination|0006310||IEA,chromosome separation|0051304||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013060258.1;locus_tag=IY40_RS23860;product=DNA topoisomerase III;protein_id=WP_043143773.1;transl_table=11 NZ_JPQY01000057.1 RefSeq gene 2610 3182 . - . ID=gene-IY40_RS23865;Name=IY40_RS23865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS23865;old_locus_tag=IY40_24325 NZ_JPQY01000057.1 Protein Homology CDS 2610 3182 . - 0 ID=cds-WP_043143774.1;Parent=gene-IY40_RS23865;Dbxref=GenBank:WP_043143774.1;Name=WP_043143774.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013060257.1;locus_tag=IY40_RS23865;product=hypothetical protein;protein_id=WP_043143774.1;transl_table=11 NZ_JPQY01000057.1 RefSeq gene 3179 3928 . - . ID=gene-IY40_RS25585;Name=IY40_RS25585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS25585 NZ_JPQY01000057.1 Protein Homology CDS 3179 3928 . - 0 ID=cds-WP_072008282.1;Parent=gene-IY40_RS25585;Dbxref=GenBank:WP_072008282.1;Name=WP_072008282.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013811156.1;locus_tag=IY40_RS25585;product=PFL_4669 family integrating conjugative element protein;protein_id=WP_072008282.1;transl_table=11 NZ_JPQY01000057.1 RefSeq pseudogene 4219 4582 . - . ID=gene-IY40_RS26550;Name=IY40_RS26550;end_range=4582,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IY40_RS26550;partial=true;pseudo=true NZ_JPQY01000057.1 Protein Homology CDS 4219 4582 . - 1 ID=cds-IY40_RS26550;Parent=gene-IY40_RS26550;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=4582,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012146812.1;locus_tag=IY40_RS26550;partial=true;product=STY4528 family pathogenicity island replication protein;pseudo=true;transl_table=11 ##sequence-region NZ_JPQY01000058.1 1 10454 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=615 NZ_JPQY01000058.1 RefSeq region 1 10454 . + . ID=NZ_JPQY01000058.1:1..10454;Dbxref=taxon:615;collected-by=Mahloro H. Serepa%3B Vincent M. Gray;collection-date=2013-04-11;country=South Africa: North West Province;gbkey=Src;genome=genomic;identified-by=Mahloro H. Serepa%3B Vincent M. Gray;isolation-source=entomopathogenic nematode Oscheius sp. MCB living in soil;mol_type=genomic DNA;nat-host=Oscheius sp. MCB;strain=MCB NZ_JPQY01000058.1 RefSeq gene 244 804 . + . ID=gene-IY40_RS23875;Name=IY40_RS23875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS23875;old_locus_tag=IY40_24335 NZ_JPQY01000058.1 Protein Homology CDS 244 804 . + 0 ID=cds-WP_043143780.1;Parent=gene-IY40_RS23875;Dbxref=GenBank:WP_043143780.1;Name=WP_043143780.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004938731.1;locus_tag=IY40_RS23875;product=fimbrial protein;protein_id=WP_043143780.1;transl_table=11 NZ_JPQY01000058.1 RefSeq gene 889 1434 . + . ID=gene-IY40_RS23880;Name=IY40_RS23880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS23880;old_locus_tag=IY40_24340 NZ_JPQY01000058.1 Protein Homology CDS 889 1434 . + 0 ID=cds-WP_043143789.1;Parent=gene-IY40_RS23880;Dbxref=GenBank:WP_043143789.1;Name=WP_043143789.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004929607.1;locus_tag=IY40_RS23880;product=fimbrial protein;protein_id=WP_043143789.1;transl_table=11 NZ_JPQY01000058.1 RefSeq gene 1464 4019 . + . ID=gene-IY40_RS23885;Name=IY40_RS23885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS23885;old_locus_tag=IY40_24345 NZ_JPQY01000058.1 Protein Homology CDS 1464 4019 . + 0 ID=cds-WP_050505199.1;Parent=gene-IY40_RS23885;Dbxref=GenBank:WP_050505199.1;Name=WP_050505199.1;Ontology_term=GO:0009297,GO:0005515,GO:0015473,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein binding|0005515||IEA,fimbrial usher porin activity|0015473||IEA;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017893978.1;locus_tag=IY40_RS23885;product=outer membrane usher protein;protein_id=WP_050505199.1;transl_table=11 NZ_JPQY01000058.1 RefSeq gene 4050 4799 . + . ID=gene-IY40_RS23890;Name=IY40_RS23890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS23890;old_locus_tag=IY40_24350 NZ_JPQY01000058.1 Protein Homology CDS 4050 4799 . + 0 ID=cds-WP_043143791.1;Parent=gene-IY40_RS23890;Dbxref=GenBank:WP_043143791.1;Name=WP_043143791.1;Ontology_term=GO:0071555,GO:0030288;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_process=cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019453459.1;locus_tag=IY40_RS23890;product=fimbria/pilus periplasmic chaperone;protein_id=WP_043143791.1;transl_table=11 NZ_JPQY01000058.1 RefSeq gene 4847 5461 . + . ID=gene-IY40_RS23895;Name=IY40_RS23895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS23895;old_locus_tag=IY40_24355 NZ_JPQY01000058.1 Protein Homology CDS 4847 5461 . + 0 ID=cds-WP_043143782.1;Parent=gene-IY40_RS23895;Dbxref=GenBank:WP_043143782.1;Name=WP_043143782.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004929600.1;locus_tag=IY40_RS23895;product=fimbrial protein;protein_id=WP_043143782.1;transl_table=11 NZ_JPQY01000058.1 RefSeq gene 5472 6044 . + . ID=gene-IY40_RS23900;Name=IY40_RS23900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS23900;old_locus_tag=IY40_24360 NZ_JPQY01000058.1 Protein Homology CDS 5472 6044 . + 0 ID=cds-WP_049204139.1;Parent=gene-IY40_RS23900;Dbxref=GenBank:WP_049204139.1;Name=WP_049204139.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: protein motif:HMM:NF012635.6;locus_tag=IY40_RS23900;product=fimbrial protein;protein_id=WP_049204139.1;transl_table=11 NZ_JPQY01000058.1 RefSeq gene 6055 6567 . + . ID=gene-IY40_RS24885;Name=IY40_RS24885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS24885 NZ_JPQY01000058.1 Protein Homology CDS 6055 6567 . + 0 ID=cds-WP_050505200.1;Parent=gene-IY40_RS24885;Dbxref=GenBank:WP_050505200.1;Name=WP_050505200.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: protein motif:HMM:NF012635.6;locus_tag=IY40_RS24885;product=fimbrial protein;protein_id=WP_050505200.1;transl_table=11 NZ_JPQY01000058.1 RefSeq gene 6738 7547 . + . ID=gene-IY40_RS23910;Name=IY40_RS23910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS23910;old_locus_tag=IY40_24370 NZ_JPQY01000058.1 GeneMarkS-2+ CDS 6738 7547 . + 0 ID=cds-WP_043143783.1;Parent=gene-IY40_RS23910;Dbxref=GenBank:WP_043143783.1;Name=WP_043143783.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IY40_RS23910;product=hypothetical protein;protein_id=WP_043143783.1;transl_table=11 NZ_JPQY01000058.1 RefSeq gene 7746 8654 . + . ID=gene-IY40_RS23915;Name=IY40_RS23915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS23915;old_locus_tag=IY40_24375 NZ_JPQY01000058.1 GeneMarkS-2+ CDS 7746 8654 . + 0 ID=cds-WP_043143785.1;Parent=gene-IY40_RS23915;Dbxref=GenBank:WP_043143785.1;Name=WP_043143785.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IY40_RS23915;product=hypothetical protein;protein_id=WP_043143785.1;transl_table=11 NZ_JPQY01000058.1 RefSeq gene 8882 9418 . + . ID=gene-IY40_RS23920;Name=IY40_RS23920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS23920;old_locus_tag=IY40_24380 NZ_JPQY01000058.1 Protein Homology CDS 8882 9418 . + 0 ID=cds-WP_043143787.1;Parent=gene-IY40_RS23920;Dbxref=GenBank:WP_043143787.1;Name=WP_043143787.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016929383.1;locus_tag=IY40_RS23920;product=helix-turn-helix transcriptional regulator;protein_id=WP_043143787.1;transl_table=11 NZ_JPQY01000058.1 RefSeq gene 9555 9839 . + . ID=gene-IY40_RS23925;Name=IY40_RS23925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS23925;old_locus_tag=IY40_24385 NZ_JPQY01000058.1 GeneMarkS-2+ CDS 9555 9839 . + 0 ID=cds-WP_043143788.1;Parent=gene-IY40_RS23925;Dbxref=GenBank:WP_043143788.1;Name=WP_043143788.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IY40_RS23925;product=hypothetical protein;protein_id=WP_043143788.1;transl_table=11 ##sequence-region NZ_JPQY01000059.1 1 26319 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=615 NZ_JPQY01000059.1 RefSeq region 1 26319 . + . ID=NZ_JPQY01000059.1:1..26319;Dbxref=taxon:615;collected-by=Mahloro H. Serepa%3B Vincent M. Gray;collection-date=2013-04-11;country=South Africa: North West Province;gbkey=Src;genome=genomic;identified-by=Mahloro H. Serepa%3B Vincent M. Gray;isolation-source=entomopathogenic nematode Oscheius sp. MCB living in soil;mol_type=genomic DNA;nat-host=Oscheius sp. MCB;strain=MCB NZ_JPQY01000059.1 RefSeq gene 1 458 . + . ID=gene-IY40_RS23930;Name=IY40_RS23930;gbkey=Gene;gene_biotype=rRNA;locus_tag=IY40_RS23930;old_locus_tag=IY40_24390;partial=true;start_range=.,1 NZ_JPQY01000059.1 cmsearch rRNA 1 458 . + . ID=rna-IY40_RS23930;Parent=gene-IY40_RS23930;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=IY40_RS23930;partial=true;product=23S ribosomal RNA;start_range=.,1 NZ_JPQY01000059.1 cmsearch exon 1 458 . + . ID=exon-IY40_RS23930-1;Parent=rna-IY40_RS23930;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=IY40_RS23930;partial=true;product=23S ribosomal RNA;start_range=.,1 NZ_JPQY01000059.1 RefSeq gene 558 673 . + . ID=gene-IY40_RS23935;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=IY40_RS23935;old_locus_tag=IY40_24395 NZ_JPQY01000059.1 cmsearch rRNA 558 673 . + . ID=rna-IY40_RS23935;Parent=gene-IY40_RS23935;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=IY40_RS23935;product=5S ribosomal RNA NZ_JPQY01000059.1 cmsearch exon 558 673 . + . ID=exon-IY40_RS23935-1;Parent=rna-IY40_RS23935;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=IY40_RS23935;product=5S ribosomal RNA NZ_JPQY01000059.1 RefSeq gene 930 2240 . + . ID=gene-IY40_RS23940;Name=IY40_RS23940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS23940;old_locus_tag=IY40_24400 NZ_JPQY01000059.1 Protein Homology CDS 930 2240 . + 0 ID=cds-WP_025304008.1;Parent=gene-IY40_RS23940;Dbxref=GenBank:WP_025304008.1;Name=WP_025304008.1;Ontology_term=GO:0016740;gbkey=CDS;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017893777.1;locus_tag=IY40_RS23940;product=MFS family transporter;protein_id=WP_025304008.1;transl_table=11 NZ_JPQY01000059.1 RefSeq gene 2277 3632 . - . ID=gene-IY40_RS23945;Name=pssA;gbkey=Gene;gene=pssA;gene_biotype=protein_coding;locus_tag=IY40_RS23945;old_locus_tag=IY40_24405 NZ_JPQY01000059.1 Protein Homology CDS 2277 3632 . - 0 ID=cds-WP_025304007.1;Parent=gene-IY40_RS23945;Dbxref=GenBank:WP_025304007.1;Name=WP_025304007.1;Ontology_term=GO:0032049,GO:0008444;gbkey=CDS;gene=pssA;go_function=CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity|0008444||IEA;go_process=cardiolipin biosynthetic process|0032049||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208751.1;locus_tag=IY40_RS23945;product=CDP-diacylglycerol--serine O-phosphatidyltransferase;protein_id=WP_025304007.1;transl_table=11 NZ_JPQY01000059.1 RefSeq gene 3785 6433 . - . ID=gene-IY40_RS23950;Name=IY40_RS23950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS23950;old_locus_tag=IY40_24410 NZ_JPQY01000059.1 Protein Homology CDS 3785 6433 . - 0 ID=cds-WP_025304006.1;Parent=gene-IY40_RS23950;Dbxref=GenBank:WP_025304006.1;Name=WP_025304006.1;Ontology_term=GO:0046356,GO:0003985,GO:0005524,GO:0008080,GO:0043758;gbkey=CDS;go_function=acetyl-CoA C-acetyltransferase activity|0003985||IEA,ATP binding|0005524||IEA,N-acetyltransferase activity|0008080||IEA,acetate-CoA ligase (ADP-forming) activity|0043758||IEA;go_process=acetyl-CoA catabolic process|0046356||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004928862.1;locus_tag=IY40_RS23950;product=bifunctional acetate--CoA ligase family protein/GNAT family N-acetyltransferase;protein_id=WP_025304006.1;transl_table=11 NZ_JPQY01000059.1 RefSeq gene 6482 7171 . - . ID=gene-IY40_RS23955;Name=IY40_RS23955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS23955;old_locus_tag=IY40_24415 NZ_JPQY01000059.1 Protein Homology CDS 6482 7171 . - 0 ID=cds-WP_038629863.1;Parent=gene-IY40_RS23955;Dbxref=GenBank:WP_038629863.1;Name=WP_038629863.1;Ontology_term=GO:0006400,GO:0016432;gbkey=CDS;go_function=tRNA-uridine aminocarboxypropyltransferase activity|0016432||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019455598.1;locus_tag=IY40_RS23955;product=tRNA-uridine aminocarboxypropyltransferase;protein_id=WP_038629863.1;transl_table=11 NZ_JPQY01000059.1 RefSeq gene 7287 7706 . - . ID=gene-IY40_RS23960;Name=trxC;gbkey=Gene;gene=trxC;gene_biotype=protein_coding;locus_tag=IY40_RS23960;old_locus_tag=IY40_24420 NZ_JPQY01000059.1 Protein Homology CDS 7287 7706 . - 0 ID=cds-WP_004928868.1;Parent=gene-IY40_RS23960;Dbxref=GenBank:WP_004928868.1;Name=WP_004928868.1;Ontology_term=GO:0045454,GO:0015035;gbkey=CDS;gene=trxC;go_function=protein-disulfide reductase activity|0015035||IEA;go_process=cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012146452.1;locus_tag=IY40_RS23960;product=thioredoxin TrxC;protein_id=WP_004928868.1;transl_table=11 NZ_JPQY01000059.1 RefSeq gene 7914 9002 . + . ID=gene-IY40_RS23965;Name=IY40_RS23965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS23965;old_locus_tag=IY40_24425 NZ_JPQY01000059.1 Protein Homology CDS 7914 9002 . + 0 ID=cds-WP_025304005.1;Parent=gene-IY40_RS23965;Dbxref=GenBank:WP_025304005.1;Name=WP_025304005.1;Ontology_term=GO:0006396,GO:0003723,GO:0008173;gbkey=CDS;go_function=RNA binding|0003723||IEA,RNA methyltransferase activity|0008173||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004928870.1;locus_tag=IY40_RS23965;product=tRNA/rRNA methyltransferase;protein_id=WP_025304005.1;transl_table=11 NZ_JPQY01000059.1 RefSeq gene 9063 10601 . - . ID=gene-IY40_RS23970;Name=emrB;gbkey=Gene;gene=emrB;gene_biotype=protein_coding;locus_tag=IY40_RS23970;old_locus_tag=IY40_24430 NZ_JPQY01000059.1 Protein Homology CDS 9063 10601 . - 0 ID=cds-WP_043143795.1;Parent=gene-IY40_RS23970;Dbxref=GenBank:WP_043143795.1;Name=WP_043143795.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=emrB;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208746.1;locus_tag=IY40_RS23970;product=multidrug efflux MFS transporter permease subunit EmrB;protein_id=WP_043143795.1;transl_table=11 NZ_JPQY01000059.1 RefSeq gene 10619 11791 . - . ID=gene-IY40_RS23975;Name=emrA;gbkey=Gene;gene=emrA;gene_biotype=protein_coding;locus_tag=IY40_RS23975;old_locus_tag=IY40_24435 NZ_JPQY01000059.1 Protein Homology CDS 10619 11791 . - 0 ID=cds-WP_043143796.1;Parent=gene-IY40_RS23975;Dbxref=GenBank:WP_043143796.1;Name=WP_043143796.1;gbkey=CDS;gene=emrA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012146449.1;locus_tag=IY40_RS23975;product=multidrug efflux MFS transporter periplasmic adaptor subunit EmrA;protein_id=WP_043143796.1;transl_table=11 NZ_JPQY01000059.1 RefSeq gene 11815 13266 . - . ID=gene-IY40_RS23980;Name=IY40_RS23980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS23980;old_locus_tag=IY40_24440 NZ_JPQY01000059.1 Protein Homology CDS 11815 13266 . - 0 ID=cds-WP_025304002.1;Parent=gene-IY40_RS23980;Dbxref=GenBank:WP_025304002.1;Name=WP_025304002.1;Ontology_term=GO:0006810,GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013814240.1;locus_tag=IY40_RS23980;product=efflux transporter outer membrane subunit;protein_id=WP_025304002.1;transl_table=11 NZ_JPQY01000059.1 RefSeq gene 13294 13812 . - . ID=gene-IY40_RS23985;Name=mprA;gbkey=Gene;gene=mprA;gene_biotype=protein_coding;locus_tag=IY40_RS23985;old_locus_tag=IY40_24445 NZ_JPQY01000059.1 Protein Homology CDS 13294 13812 . - 0 ID=cds-WP_025160249.1;Parent=gene-IY40_RS23985;Dbxref=GenBank:WP_025160249.1;Name=WP_025160249.1;gbkey=CDS;gene=mprA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004959349.1;locus_tag=IY40_RS23985;product=transcriptional repressor MprA;protein_id=WP_025160249.1;transl_table=11 NZ_JPQY01000059.1 RefSeq gene 13974 14321 . - . ID=gene-IY40_RS23990;Name=ygaH;gbkey=Gene;gene=ygaH;gene_biotype=protein_coding;locus_tag=IY40_RS23990;old_locus_tag=IY40_24450 NZ_JPQY01000059.1 Protein Homology CDS 13974 14321 . - 0 ID=cds-WP_043143797.1;Parent=gene-IY40_RS23990;Dbxref=GenBank:WP_043143797.1;Name=WP_043143797.1;gbkey=CDS;gene=ygaH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015378874.1;locus_tag=IY40_RS23990;product=L-valine transporter subunit YgaH;protein_id=WP_043143797.1;transl_table=11 NZ_JPQY01000059.1 RefSeq gene 14311 15057 . - . ID=gene-IY40_RS23995;Name=IY40_RS23995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS23995;old_locus_tag=IY40_24455 NZ_JPQY01000059.1 Protein Homology CDS 14311 15057 . - 0 ID=cds-WP_025304000.1;Parent=gene-IY40_RS23995;Dbxref=GenBank:WP_025304000.1;Name=WP_025304000.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020,GO:1902495;gbkey=CDS;go_component=membrane|0016020||IEA,transmembrane transporter complex|1902495||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016929851.1;locus_tag=IY40_RS23995;product=AzlC family ABC transporter permease;protein_id=WP_025304000.1;transl_table=11 NZ_JPQY01000059.1 RefSeq gene 15179 16378 . - . ID=gene-IY40_RS24000;Name=IY40_RS24000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS24000;old_locus_tag=IY40_24460 NZ_JPQY01000059.1 Protein Homology CDS 15179 16378 . - 0 ID=cds-WP_025303999.1;Parent=gene-IY40_RS24000;Dbxref=GenBank:WP_025303999.1;Name=WP_025303999.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004928887.1;locus_tag=IY40_RS24000;product=MFS transporter;protein_id=WP_025303999.1;transl_table=11 NZ_JPQY01000059.1 RefSeq gene 16484 17362 . + . ID=gene-IY40_RS24005;Name=IY40_RS24005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS24005;old_locus_tag=IY40_24465 NZ_JPQY01000059.1 Protein Homology CDS 16484 17362 . + 0 ID=cds-WP_016929849.1;Parent=gene-IY40_RS24005;Dbxref=GenBank:WP_016929849.1;Name=WP_016929849.1;Ontology_term=GO:0001217,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription repressor activity|0001217||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004928891.1;locus_tag=IY40_RS24005;product=LysR family transcriptional regulator;protein_id=WP_016929849.1;transl_table=11 NZ_JPQY01000059.1 RefSeq gene 17393 18394 . - . ID=gene-IY40_RS24010;Name=proX;gbkey=Gene;gene=proX;gene_biotype=protein_coding;locus_tag=IY40_RS24010;old_locus_tag=IY40_24470 NZ_JPQY01000059.1 Protein Homology CDS 17393 18394 . - 0 ID=cds-WP_025303998.1;Parent=gene-IY40_RS24010;Dbxref=GenBank:WP_025303998.1;Name=WP_025303998.1;Ontology_term=GO:0055085,GO:0022857,GO:0043190;gbkey=CDS;gene=proX;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016929848.1;locus_tag=IY40_RS24010;product=glycine betaine/L-proline ABC transporter substrate-binding protein ProX;protein_id=WP_025303998.1;transl_table=11 NZ_JPQY01000059.1 RefSeq gene 18464 19570 . - . ID=gene-IY40_RS24015;Name=proW;gbkey=Gene;gene=proW;gene_biotype=protein_coding;locus_tag=IY40_RS24015;old_locus_tag=IY40_24475 NZ_JPQY01000059.1 Protein Homology CDS 18464 19570 . - 0 ID=cds-WP_043143799.1;Parent=gene-IY40_RS24015;Dbxref=GenBank:WP_043143799.1;Name=WP_043143799.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=proW;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004928897.1;locus_tag=IY40_RS24015;product=glycine betaine/L-proline ABC transporter permease ProW;protein_id=WP_043143799.1;transl_table=11 NZ_JPQY01000059.1 RefSeq gene 19563 20765 . - . ID=gene-IY40_RS24020;Name=proV;gbkey=Gene;gene=proV;gene_biotype=protein_coding;locus_tag=IY40_RS24020;old_locus_tag=IY40_24480 NZ_JPQY01000059.1 Protein Homology CDS 19563 20765 . - 0 ID=cds-WP_016929846.1;Parent=gene-IY40_RS24020;Dbxref=GenBank:WP_016929846.1;Name=WP_016929846.1;Ontology_term=GO:0031460,GO:0005524;gbkey=CDS;gene=proV;go_function=ATP binding|0005524||IEA;go_process=glycine betaine transport|0031460||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014701145.1;locus_tag=IY40_RS24020;product=glycine betaine/L-proline ABC transporter ATP-binding protein ProV;protein_id=WP_016929846.1;transl_table=11 NZ_JPQY01000059.1 RefSeq gene 21173 21859 . - . ID=gene-IY40_RS24025;Name=IY40_RS24025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS24025;old_locus_tag=IY40_24485 NZ_JPQY01000059.1 Protein Homology CDS 21173 21859 . - 0 ID=cds-WP_043143800.1;Parent=gene-IY40_RS24025;Dbxref=GenBank:WP_043143800.1;Name=WP_043143800.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006318589.1;locus_tag=IY40_RS24025;product=response regulator;protein_id=WP_043143800.1;transl_table=11 NZ_JPQY01000059.1 RefSeq gene 21892 23484 . - . ID=gene-IY40_RS24030;Name=IY40_RS24030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS24030;old_locus_tag=IY40_24490 NZ_JPQY01000059.1 Protein Homology CDS 21892 23484 . - 0 ID=cds-WP_043143801.1;Parent=gene-IY40_RS24030;Dbxref=GenBank:WP_043143801.1;Name=WP_043143801.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015378871.1;locus_tag=IY40_RS24030;product=ATP-binding protein;protein_id=WP_043143801.1;transl_table=11 NZ_JPQY01000059.1 RefSeq gene 23811 25166 . + . ID=gene-IY40_RS24035;Name=IY40_RS24035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS24035;old_locus_tag=IY40_24500 NZ_JPQY01000059.1 Protein Homology CDS 23811 25166 . + 0 ID=cds-WP_043143802.1;Parent=gene-IY40_RS24035;Dbxref=GenBank:WP_043143802.1;Name=WP_043143802.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013574927.1;locus_tag=IY40_RS24035;product=2-hydroxycarboxylate transporter family protein;protein_id=WP_043143802.1;transl_table=11 NZ_JPQY01000059.1 RefSeq gene 25265 26236 . - . ID=gene-IY40_RS24040;Name=IY40_RS24040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS24040;old_locus_tag=IY40_24505 NZ_JPQY01000059.1 Protein Homology CDS 25265 26236 . - 0 ID=cds-WP_025303993.1;Parent=gene-IY40_RS24040;Dbxref=GenBank:WP_025303993.1;Name=WP_025303993.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004953758.1;locus_tag=IY40_RS24040;product=patatin-like phospholipase family protein;protein_id=WP_025303993.1;transl_table=11 ##sequence-region NZ_JPQY01000060.1 1 2295 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=615 NZ_JPQY01000060.1 RefSeq region 1 2295 . + . ID=NZ_JPQY01000060.1:1..2295;Dbxref=taxon:615;collected-by=Mahloro H. Serepa%3B Vincent M. Gray;collection-date=2013-04-11;country=South Africa: North West Province;gbkey=Src;genome=genomic;identified-by=Mahloro H. Serepa%3B Vincent M. Gray;isolation-source=entomopathogenic nematode Oscheius sp. MCB living in soil;mol_type=genomic DNA;nat-host=Oscheius sp. MCB;strain=MCB NZ_JPQY01000060.1 RefSeq gene 1 835 . + . ID=gene-IY40_RS24045;Name=IY40_RS24045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS24045;old_locus_tag=IY40_24510;partial=true;start_range=.,1 NZ_JPQY01000060.1 Protein Homology CDS 1 835 . + 1 ID=cds-WP_043143810.1;Parent=gene-IY40_RS24045;Dbxref=GenBank:WP_043143810.1;Name=WP_043143810.1;Ontology_term=GO:0006508,GO:0008236;gbkey=CDS;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019846676.1;locus_tag=IY40_RS24045;partial=true;product=S8 family serine peptidase;protein_id=WP_043143810.1;start_range=.,1;transl_table=11 NZ_JPQY01000060.1 RefSeq pseudogene 1099 1568 . - . ID=gene-IY40_RS25595;Name=IY40_RS25595;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IY40_RS25595;pseudo=true NZ_JPQY01000060.1 Protein Homology CDS 1099 1568 . - 0 ID=cds-IY40_RS25595;Parent=gene-IY40_RS25595;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000168322.1;locus_tag=IY40_RS25595;product=single-stranded DNA-binding protein;pseudo=true;transl_table=11 NZ_JPQY01000060.1 RefSeq gene 1641 2108 . - . ID=gene-IY40_RS24055;Name=IY40_RS24055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS24055;old_locus_tag=IY40_24520 NZ_JPQY01000060.1 Protein Homology CDS 1641 2108 . - 0 ID=cds-WP_043143807.1;Parent=gene-IY40_RS24055;Dbxref=GenBank:WP_043143807.1;Name=WP_043143807.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012146808.1;locus_tag=IY40_RS24055;product=STY4534 family ICE replication protein;protein_id=WP_043143807.1;transl_table=11 ##sequence-region NZ_JPQY01000061.1 1 12389 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=615 NZ_JPQY01000061.1 RefSeq region 1 12389 . + . ID=NZ_JPQY01000061.1:1..12389;Dbxref=taxon:615;collected-by=Mahloro H. Serepa%3B Vincent M. Gray;collection-date=2013-04-11;country=South Africa: North West Province;gbkey=Src;genome=genomic;identified-by=Mahloro H. Serepa%3B Vincent M. Gray;isolation-source=entomopathogenic nematode Oscheius sp. MCB living in soil;mol_type=genomic DNA;nat-host=Oscheius sp. MCB;strain=MCB NZ_JPQY01000061.1 RefSeq gene 3 776 . + . ID=gene-IY40_RS24060;Name=IY40_RS24060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS24060;old_locus_tag=IY40_24525 NZ_JPQY01000061.1 Protein Homology CDS 3 776 . + 0 ID=cds-WP_043143814.1;Parent=gene-IY40_RS24060;Dbxref=GenBank:WP_043143814.1;Name=WP_043143814.1;Ontology_term=GO:0003676,GO:0004519,GO:0046872;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,endonuclease activity|0004519||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004942831.1;locus_tag=IY40_RS24060;product=DNA/RNA non-specific endonuclease;protein_id=WP_043143814.1;transl_table=11 NZ_JPQY01000061.1 RefSeq gene 826 3906 . - . ID=gene-IY40_RS24065;Name=IY40_RS24065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS24065;old_locus_tag=IY40_24530 NZ_JPQY01000061.1 Protein Homology CDS 826 3906 . - 0 ID=cds-WP_043143816.1;Parent=gene-IY40_RS24065;Dbxref=GenBank:WP_043143816.1;Name=WP_043143816.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004928056.1;locus_tag=IY40_RS24065;product=MexW/MexI family multidrug efflux RND transporter permease subunit;protein_id=WP_043143816.1;transl_table=11 NZ_JPQY01000061.1 RefSeq gene 3917 5002 . - . ID=gene-IY40_RS24070;Name=IY40_RS24070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS24070;old_locus_tag=IY40_24535 NZ_JPQY01000061.1 Protein Homology CDS 3917 5002 . - 0 ID=cds-WP_043143818.1;Parent=gene-IY40_RS24070;Dbxref=GenBank:WP_043143818.1;Name=WP_043143818.1;Ontology_term=GO:0055085,GO:0022857,GO:0042802,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA,identical protein binding|0042802||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019456250.1;locus_tag=IY40_RS24070;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_043143818.1;transl_table=11 NZ_JPQY01000061.1 RefSeq gene 5148 5621 . + . ID=gene-IY40_RS24075;Name=soxR;gbkey=Gene;gene=soxR;gene_biotype=protein_coding;locus_tag=IY40_RS24075;old_locus_tag=IY40_24540 NZ_JPQY01000061.1 Protein Homology CDS 5148 5621 . + 0 ID=cds-WP_025302326.1;Parent=gene-IY40_RS24075;Dbxref=GenBank:WP_025302326.1;Name=WP_025302326.1;Ontology_term=GO:0006355,GO:0006979,GO:0003700,GO:0051537;gbkey=CDS;gene=soxR;go_function=DNA-binding transcription factor activity|0003700||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004928063.1;locus_tag=IY40_RS24075;product=redox-sensitive transcriptional activator SoxR;protein_id=WP_025302326.1;transl_table=11 NZ_JPQY01000061.1 RefSeq gene 5669 6184 . - . ID=gene-IY40_RS24080;Name=IY40_RS24080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS24080;old_locus_tag=IY40_24545 NZ_JPQY01000061.1 Protein Homology CDS 5669 6184 . - 0 ID=cds-WP_197538605.1;Parent=gene-IY40_RS24080;Dbxref=GenBank:WP_197538605.1;Name=WP_197538605.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:NF012422.6;locus_tag=IY40_RS24080;product=response regulator transcription factor;protein_id=WP_197538605.1;transl_table=11 NZ_JPQY01000061.1 RefSeq gene 6276 6800 . - . ID=gene-IY40_RS24890;Name=IY40_RS24890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS24890;old_locus_tag=IY40_24550 NZ_JPQY01000061.1 GeneMarkS-2+ CDS 6276 6800 . - 0 ID=cds-WP_025302324.1;Parent=gene-IY40_RS24890;Dbxref=GenBank:WP_025302324.1;Name=WP_025302324.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IY40_RS24890;product=hypothetical protein;protein_id=WP_025302324.1;transl_table=11 NZ_JPQY01000061.1 RefSeq gene 6937 8001 . - . ID=gene-IY40_RS24090;Name=IY40_RS24090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS24090;old_locus_tag=IY40_24555 NZ_JPQY01000061.1 Protein Homology CDS 6937 8001 . - 0 ID=cds-WP_043143820.1;Parent=gene-IY40_RS24090;Dbxref=GenBank:WP_043143820.1;Name=WP_043143820.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004928073.1;locus_tag=IY40_RS24090;product=fimbrial protein;protein_id=WP_043143820.1;transl_table=11 NZ_JPQY01000061.1 RefSeq gene 8016 10511 . - . ID=gene-IY40_RS24095;Name=IY40_RS24095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS24095;old_locus_tag=IY40_24560 NZ_JPQY01000061.1 Protein Homology CDS 8016 10511 . - 0 ID=cds-WP_043143823.1;Parent=gene-IY40_RS24095;Dbxref=GenBank:WP_043143823.1;Name=WP_043143823.1;Ontology_term=GO:0009297,GO:0015473,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=fimbrial usher porin activity|0015473||IEA;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000782716.1;locus_tag=IY40_RS24095;product=fimbria/pilus outer membrane usher protein;protein_id=WP_043143823.1;transl_table=11 NZ_JPQY01000061.1 RefSeq gene 10526 11221 . - . ID=gene-IY40_RS24100;Name=IY40_RS24100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS24100;old_locus_tag=IY40_24565 NZ_JPQY01000061.1 Protein Homology CDS 10526 11221 . - 0 ID=cds-WP_025302321.1;Parent=gene-IY40_RS24100;Dbxref=GenBank:WP_025302321.1;Name=WP_025302321.1;Ontology_term=GO:0006457,GO:0043711,GO:0030288;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_process=protein folding|0006457||IEA,pilus organization|0043711||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001223973.1;locus_tag=IY40_RS24100;product=fimbrial biogenesis chaperone;protein_id=WP_025302321.1;transl_table=11 NZ_JPQY01000061.1 RefSeq gene 11276 11872 . - . ID=gene-IY40_RS24105;Name=IY40_RS24105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS24105;old_locus_tag=IY40_24570 NZ_JPQY01000061.1 Protein Homology CDS 11276 11872 . - 0 ID=cds-WP_369825806.1;Parent=gene-IY40_RS24105;Dbxref=GenBank:WP_369825806.1;Name=WP_369825806.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015570088.1;locus_tag=IY40_RS24105;product=fimbrial protein;protein_id=WP_369825806.1;transl_table=11 ##sequence-region NZ_JPQY01000062.1 1 9508 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=615 NZ_JPQY01000062.1 RefSeq region 1 9508 . + . ID=NZ_JPQY01000062.1:1..9508;Dbxref=taxon:615;collected-by=Mahloro H. Serepa%3B Vincent M. Gray;collection-date=2013-04-11;country=South Africa: North West Province;gbkey=Src;genome=genomic;identified-by=Mahloro H. Serepa%3B Vincent M. Gray;isolation-source=entomopathogenic nematode Oscheius sp. MCB living in soil;mol_type=genomic DNA;nat-host=Oscheius sp. MCB;strain=MCB NZ_JPQY01000062.1 RefSeq gene 1 444 . + . ID=gene-IY40_RS25600;Name=IY40_RS25600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS25600;partial=true;start_range=.,1 NZ_JPQY01000062.1 Protein Homology CDS 1 444 . + 0 ID=cds-WP_321029153.1;Parent=gene-IY40_RS25600;Dbxref=GenBank:WP_321029153.1;Name=WP_321029153.1;Ontology_term=GO:0003723,GO:0004521;gbkey=CDS;go_function=RNA binding|0003723||IEA,RNA endonuclease activity|0004521||IEA;inference=COORDINATES: protein motif:HMM:NF012755.6;locus_tag=IY40_RS25600;partial=true;product=ribonuclease domain-containing protein;protein_id=WP_321029153.1;start_range=.,1;transl_table=11 NZ_JPQY01000062.1 RefSeq gene 441 773 . + . ID=gene-IY40_RS24110;Name=IY40_RS24110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS24110;old_locus_tag=IY40_24575 NZ_JPQY01000062.1 Protein Homology CDS 441 773 . + 0 ID=cds-WP_080287160.1;Parent=gene-IY40_RS24110;Dbxref=GenBank:WP_080287160.1;Name=WP_080287160.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016927806.1;locus_tag=IY40_RS24110;product=barstar family protein;protein_id=WP_080287160.1;transl_table=11 NZ_JPQY01000062.1 RefSeq pseudogene 1128 2330 . + . ID=gene-IY40_RS24115;Name=IY40_RS24115;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IY40_RS24115;old_locus_tag=IY40_24580;partial=true;pseudo=true;start_range=.,1128 NZ_JPQY01000062.1 Protein Homology CDS 1128 2330 . + 0 ID=cds-IY40_RS24115;Parent=gene-IY40_RS24115;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004171800.1;locus_tag=IY40_RS24115;partial=true;product=RHS repeat-associated core domain-containing protein;pseudo=true;start_range=.,1128;transl_table=11 NZ_JPQY01000062.1 RefSeq gene 2334 2768 . + . ID=gene-IY40_RS25605;Name=IY40_RS25605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS25605 NZ_JPQY01000062.1 Protein Homology CDS 2334 2768 . + 0 ID=cds-WP_072008285.1;Parent=gene-IY40_RS25605;Dbxref=GenBank:WP_072008285.1;Name=WP_072008285.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000789494.1;locus_tag=IY40_RS25605;product=hypothetical protein;protein_id=WP_072008285.1;transl_table=11 NZ_JPQY01000062.1 RefSeq gene 2821 3144 . + . ID=gene-IY40_RS24120;Name=IY40_RS24120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS24120;old_locus_tag=IY40_24585 NZ_JPQY01000062.1 Protein Homology CDS 2821 3144 . + 0 ID=cds-WP_043143829.1;Parent=gene-IY40_RS24120;Dbxref=GenBank:WP_043143829.1;Name=WP_043143829.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016927802.1;locus_tag=IY40_RS24120;product=hypothetical protein;protein_id=WP_043143829.1;transl_table=11 NZ_JPQY01000062.1 RefSeq gene 3195 3350 . - . ID=gene-IY40_RS26325;Name=IY40_RS26325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS26325 NZ_JPQY01000062.1 GeneMarkS-2+ CDS 3195 3350 . - 0 ID=cds-WP_162472585.1;Parent=gene-IY40_RS26325;Dbxref=GenBank:WP_162472585.1;Name=WP_162472585.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IY40_RS26325;product=hypothetical protein;protein_id=WP_162472585.1;transl_table=11 NZ_JPQY01000062.1 RefSeq pseudogene 3285 3820 . + . ID=gene-IY40_RS26665;Name=IY40_RS26665;end_range=3820,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IY40_RS26665;partial=true;pseudo=true;start_range=.,3285 NZ_JPQY01000062.1 Protein Homology CDS 3285 3820 . + 0 ID=cds-IY40_RS26665;Parent=gene-IY40_RS26665;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=3820,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004159529.1;locus_tag=IY40_RS26665;partial=true;product=RHS repeat-associated core domain-containing protein;pseudo=true;start_range=.,3285;transl_table=11 NZ_JPQY01000062.1 RefSeq gene 4495 4659 . - . ID=gene-IY40_RS26280;Name=IY40_RS26280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS26280;old_locus_tag=IY40_24600 NZ_JPQY01000062.1 GeneMarkS-2+ CDS 4495 4659 . - 0 ID=cds-WP_161781791.1;Parent=gene-IY40_RS26280;Dbxref=GenBank:WP_161781791.1;Name=WP_161781791.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IY40_RS26280;product=hypothetical protein;protein_id=WP_161781791.1;transl_table=11 NZ_JPQY01000062.1 RefSeq gene 4697 5593 . - . ID=gene-IY40_RS24135;Name=IY40_RS24135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS24135;old_locus_tag=IY40_24605 NZ_JPQY01000062.1 Protein Homology CDS 4697 5593 . - 0 ID=cds-WP_043143834.1;Parent=gene-IY40_RS24135;Dbxref=GenBank:WP_043143834.1;Name=WP_043143834.1;Ontology_term=GO:0009058,GO:0016853,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=isomerase activity|0016853||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015377819.1;locus_tag=IY40_RS24135;product=PhzF family phenazine biosynthesis protein;protein_id=WP_043143834.1;transl_table=11 NZ_JPQY01000062.1 RefSeq gene 5648 6565 . - . ID=gene-IY40_RS24140;Name=IY40_RS24140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS24140;old_locus_tag=IY40_24610 NZ_JPQY01000062.1 Protein Homology CDS 5648 6565 . - 0 ID=cds-WP_043143836.1;Parent=gene-IY40_RS24140;Dbxref=GenBank:WP_043143836.1;Name=WP_043143836.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004940731.1;locus_tag=IY40_RS24140;product=DMT family transporter;protein_id=WP_043143836.1;transl_table=11 NZ_JPQY01000062.1 RefSeq gene 6747 7616 . + . ID=gene-IY40_RS24145;Name=IY40_RS24145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS24145;old_locus_tag=IY40_24620 NZ_JPQY01000062.1 Protein Homology CDS 6747 7616 . + 0 ID=cds-WP_043143838.1;Parent=gene-IY40_RS24145;Dbxref=GenBank:WP_043143838.1;Name=WP_043143838.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004940729.1;locus_tag=IY40_RS24145;product=helix-turn-helix domain-containing protein;protein_id=WP_043143838.1;transl_table=11 NZ_JPQY01000062.1 RefSeq gene 7634 8068 . + . ID=gene-IY40_RS24150;Name=IY40_RS24150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS24150;old_locus_tag=IY40_24625 NZ_JPQY01000062.1 Protein Homology CDS 7634 8068 . + 0 ID=cds-WP_043143840.1;Parent=gene-IY40_RS24150;Dbxref=GenBank:WP_043143840.1;Name=WP_043143840.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016927791.1;locus_tag=IY40_RS24150;product=VOC family protein;protein_id=WP_043143840.1;transl_table=11 NZ_JPQY01000062.1 RefSeq gene 8379 8831 . + . ID=gene-IY40_RS24155;Name=IY40_RS24155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS24155;old_locus_tag=IY40_24630 NZ_JPQY01000062.1 Protein Homology CDS 8379 8831 . + 0 ID=cds-WP_028127408.1;Parent=gene-IY40_RS24155;Dbxref=GenBank:WP_028127408.1;Name=WP_028127408.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015377823.1;locus_tag=IY40_RS24155;product=MoaF-related domain-containing protein;protein_id=WP_028127408.1;transl_table=11 NZ_JPQY01000062.1 RefSeq gene 8841 9332 . + . ID=gene-IY40_RS24160;Name=IY40_RS24160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS24160;old_locus_tag=IY40_24635 NZ_JPQY01000062.1 Protein Homology CDS 8841 9332 . + 0 ID=cds-WP_025302780.1;Parent=gene-IY40_RS24160;Dbxref=GenBank:WP_025302780.1;Name=WP_025302780.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016927789.1;locus_tag=IY40_RS24160;product=nuclear transport factor 2 family protein;protein_id=WP_025302780.1;transl_table=11 ##sequence-region NZ_JPQY01000063.1 1 11772 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=615 NZ_JPQY01000063.1 RefSeq region 1 11772 . + . ID=NZ_JPQY01000063.1:1..11772;Dbxref=taxon:615;collected-by=Mahloro H. Serepa%3B Vincent M. Gray;collection-date=2013-04-11;country=South Africa: North West Province;gbkey=Src;genome=genomic;identified-by=Mahloro H. Serepa%3B Vincent M. Gray;isolation-source=entomopathogenic nematode Oscheius sp. MCB living in soil;mol_type=genomic DNA;nat-host=Oscheius sp. MCB;strain=MCB NZ_JPQY01000063.1 RefSeq gene 1 2270 . - . ID=gene-IY40_RS24165;Name=IY40_RS24165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS24165;old_locus_tag=IY40_24640;partial=true;start_range=.,1 NZ_JPQY01000063.1 Protein Homology CDS 1 2270 . - 0 ID=cds-WP_321029154.1;Parent=gene-IY40_RS24165;Dbxref=GenBank:WP_321029154.1;Name=WP_321029154.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF023351.6;locus_tag=IY40_RS24165;partial=true;product=inverse autotransporter beta domain-containing protein;protein_id=WP_321029154.1;start_range=.,1;transl_table=11 NZ_JPQY01000063.1 RefSeq gene 3403 3957 . - . ID=gene-IY40_RS24895;Name=IY40_RS24895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS24895 NZ_JPQY01000063.1 Protein Homology CDS 3403 3957 . - 0 ID=cds-WP_050505202.1;Parent=gene-IY40_RS24895;Dbxref=GenBank:WP_050505202.1;Name=WP_050505202.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004105369.1;locus_tag=IY40_RS24895;product=tyrosine-type DNA invertase;protein_id=WP_050505202.1;transl_table=11 NZ_JPQY01000063.1 RefSeq gene 4478 5032 . - . ID=gene-IY40_RS24900;Name=IY40_RS24900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS24900 NZ_JPQY01000063.1 Protein Homology CDS 4478 5032 . - 0 ID=cds-WP_050505203.1;Parent=gene-IY40_RS24900;Dbxref=GenBank:WP_050505203.1;Name=WP_050505203.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000194105.1;locus_tag=IY40_RS24900;product=tyrosine-type DNA invertase;protein_id=WP_050505203.1;transl_table=11 NZ_JPQY01000063.1 RefSeq pseudogene 5537 5735 . - . ID=gene-IY40_RS26560;Name=IY40_RS26560;end_range=5735,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IY40_RS26560;partial=true;pseudo=true NZ_JPQY01000063.1 Protein Homology CDS 5537 5735 . - 0 ID=cds-IY40_RS26560;Parent=gene-IY40_RS26560;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=5735,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006484960.1;locus_tag=IY40_RS26560;partial=true;product=IS66 family transposase;pseudo=true;transl_table=11 NZ_JPQY01000063.1 RefSeq pseudogene 6095 6942 . - . ID=gene-IY40_RS25835;Name=IY40_RS25835;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IY40_RS25835;pseudo=true NZ_JPQY01000063.1 Protein Homology CDS 6095 6942 . - 0 ID=cds-IY40_RS25835;Parent=gene-IY40_RS25835;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611197.1;locus_tag=IY40_RS25835;product=IS5 family transposase;pseudo=true;transl_table=11 NZ_JPQY01000063.1 RefSeq gene 7362 8237 . + . ID=gene-IY40_RS26120;Name=IY40_RS26120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS26120 NZ_JPQY01000063.1 GeneMarkS-2+ CDS 7362 8237 . + 0 ID=cds-WP_144240691.1;Parent=gene-IY40_RS26120;Dbxref=GenBank:WP_144240691.1;Name=WP_144240691.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IY40_RS26120;product=hypothetical protein;protein_id=WP_144240691.1;transl_table=11 NZ_JPQY01000063.1 RefSeq gene 8612 8875 . - . ID=gene-IY40_RS26670;Name=IY40_RS26670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS26670 NZ_JPQY01000063.1 Protein Homology CDS 8612 8875 . - 0 ID=cds-WP_321029155.1;Parent=gene-IY40_RS26670;Dbxref=GenBank:WP_321029155.1;Name=WP_321029155.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF033828.1;locus_tag=IY40_RS26670;product=Exc2 family lipoprotein;protein_id=WP_321029155.1;transl_table=11 NZ_JPQY01000063.1 RefSeq pseudogene 9015 9439 . - . ID=gene-IY40_RS24910;Name=IY40_RS24910;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IY40_RS24910;pseudo=true NZ_JPQY01000063.1 Protein Homology CDS 9015 9439 . - 0 ID=cds-IY40_RS24910;Parent=gene-IY40_RS24910;Note=frameshifted;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013814047.1;locus_tag=IY40_RS24910;product=GNAT family N-acetyltransferase;pseudo=true;transl_table=11 NZ_JPQY01000063.1 RefSeq pseudogene 9473 10027 . - . ID=gene-IY40_RS24170;Name=IY40_RS24170;end_range=10027,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IY40_RS24170;partial=true;pseudo=true NZ_JPQY01000063.1 Protein Homology CDS 9473 10027 . - 0 ID=cds-IY40_RS24170;Parent=gene-IY40_RS24170;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004803;end_range=10027,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013511896.1;locus_tag=IY40_RS24170;partial=true;product=IS3 family transposase;pseudo=true;transl_table=11 NZ_JPQY01000063.1 RefSeq gene 10279 11772 . - . ID=gene-IY40_RS26290;Name=IY40_RS26290;end_range=11772,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS26290;old_locus_tag=IY40_24660;partial=true NZ_JPQY01000063.1 GeneMarkS-2+ CDS 10279 11772 . - 0 ID=cds-WP_161781792.1;Parent=gene-IY40_RS26290;Dbxref=GenBank:WP_161781792.1;Name=WP_161781792.1;end_range=11772,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IY40_RS26290;partial=true;product=hypothetical protein;protein_id=WP_161781792.1;transl_table=11 ##sequence-region NZ_JPQY01000064.1 1 988 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=615 NZ_JPQY01000064.1 RefSeq region 1 988 . + . ID=NZ_JPQY01000064.1:1..988;Dbxref=taxon:615;collected-by=Mahloro H. Serepa%3B Vincent M. Gray;collection-date=2013-04-11;country=South Africa: North West Province;gbkey=Src;genome=genomic;identified-by=Mahloro H. Serepa%3B Vincent M. Gray;isolation-source=entomopathogenic nematode Oscheius sp. MCB living in soil;mol_type=genomic DNA;nat-host=Oscheius sp. MCB;strain=MCB NZ_JPQY01000064.1 RefSeq gene 83 343 . - . ID=gene-IY40_RS24180;Name=bhsA;gbkey=Gene;gene=bhsA;gene_biotype=protein_coding;locus_tag=IY40_RS24180;old_locus_tag=IY40_24665 NZ_JPQY01000064.1 Protein Homology CDS 83 343 . - 0 ID=cds-WP_025303021.1;Parent=gene-IY40_RS24180;Dbxref=GenBank:WP_025303021.1;Name=WP_025303021.1;Ontology_term=GO:0006950,GO:0046688;gbkey=CDS;gene=bhsA;go_process=response to stress|0006950||IEA,response to copper ion|0046688||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000849090.1;locus_tag=IY40_RS24180;product=multiple stress resistance protein BhsA;protein_id=WP_025303021.1;transl_table=11 NZ_JPQY01000064.1 RefSeq gene 673 988 . + . ID=gene-IY40_RS24185;Name=IY40_RS24185;end_range=988,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS24185;old_locus_tag=IY40_24670;partial=true NZ_JPQY01000064.1 Protein Homology CDS 673 988 . + 0 ID=cds-WP_200877959.1;Parent=gene-IY40_RS24185;Dbxref=GenBank:WP_200877959.1;Name=WP_200877959.1;Ontology_term=GO:0006207,GO:0004590;end_range=988,.;gbkey=CDS;go_function=orotidine-5'-phosphate decarboxylase activity|0004590||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017893016.1;locus_tag=IY40_RS24185;partial=true;product=orotidine 5'-phosphate decarboxylase / HUMPS family protein;protein_id=WP_200877959.1;transl_table=11 ##sequence-region NZ_JPQY01000065.1 1 6685 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=615 NZ_JPQY01000065.1 RefSeq region 1 6685 . + . ID=NZ_JPQY01000065.1:1..6685;Dbxref=taxon:615;collected-by=Mahloro H. Serepa%3B Vincent M. Gray;collection-date=2013-04-11;country=South Africa: North West Province;gbkey=Src;genome=genomic;identified-by=Mahloro H. Serepa%3B Vincent M. Gray;isolation-source=entomopathogenic nematode Oscheius sp. MCB living in soil;mol_type=genomic DNA;nat-host=Oscheius sp. MCB;strain=MCB NZ_JPQY01000065.1 RefSeq pseudogene 1 194 . + . ID=gene-IY40_RS26565;Name=IY40_RS26565;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IY40_RS26565;partial=true;pseudo=true;start_range=.,1 NZ_JPQY01000065.1 GeneMarkS-2+ CDS 1 194 . + 2 ID=cds-IY40_RS26565;Parent=gene-IY40_RS26565;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IY40_RS26565;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1;transl_table=11 NZ_JPQY01000065.1 RefSeq gene 433 2934 . + . ID=gene-IY40_RS24190;Name=IY40_RS24190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS24190;old_locus_tag=IY40_24675 NZ_JPQY01000065.1 GeneMarkS-2+ CDS 433 2934 . + 0 ID=cds-WP_043143857.1;Parent=gene-IY40_RS24190;Dbxref=GenBank:WP_043143857.1;Name=WP_043143857.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IY40_RS24190;product=zinc metalloprotease;protein_id=WP_043143857.1;transl_table=11 NZ_JPQY01000065.1 RefSeq pseudogene 3354 4305 . + . ID=gene-IY40_RS26570;Name=IY40_RS26570;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IY40_RS26570;pseudo=true NZ_JPQY01000065.1 Protein Homology CDS 3354 4305 . + 0 ID=cds-IY40_RS26570;Parent=gene-IY40_RS26570;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001395480.1;locus_tag=IY40_RS26570;product=transposase;pseudo=true;transl_table=11 NZ_JPQY01000065.1 RefSeq gene 4418 5734 . + . ID=gene-IY40_RS24195;Name=IY40_RS24195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS24195;old_locus_tag=IY40_24680 NZ_JPQY01000065.1 GeneMarkS-2+ CDS 4418 5734 . + 0 ID=cds-WP_152561318.1;Parent=gene-IY40_RS24195;Dbxref=GenBank:WP_152561318.1;Name=WP_152561318.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IY40_RS24195;product=hypothetical protein;protein_id=WP_152561318.1;transl_table=11 NZ_JPQY01000065.1 RefSeq gene 5892 6077 . + . ID=gene-IY40_RS26130;Name=IY40_RS26130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS26130 NZ_JPQY01000065.1 GeneMarkS-2+ CDS 5892 6077 . + 0 ID=cds-WP_152561319.1;Parent=gene-IY40_RS26130;Dbxref=GenBank:WP_152561319.1;Name=WP_152561319.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IY40_RS26130;product=hypothetical protein;protein_id=WP_152561319.1;transl_table=11 NZ_JPQY01000065.1 RefSeq gene 6458 6685 . + . ID=gene-IY40_RS24200;Name=IY40_RS24200;end_range=6685,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS24200;partial=true NZ_JPQY01000065.1 GeneMarkS-2+ CDS 6458 6685 . + 0 ID=cds-WP_043143863.1;Parent=gene-IY40_RS24200;Dbxref=GenBank:WP_043143863.1;Name=WP_043143863.1;end_range=6685,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IY40_RS24200;partial=true;product=LysM peptidoglycan-binding domain-containing protein;protein_id=WP_043143863.1;transl_table=11 ##sequence-region NZ_JPQY01000066.1 1 15273 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=615 NZ_JPQY01000066.1 RefSeq region 1 15273 . + . ID=NZ_JPQY01000066.1:1..15273;Dbxref=taxon:615;collected-by=Mahloro H. Serepa%3B Vincent M. Gray;collection-date=2013-04-11;country=South Africa: North West Province;gbkey=Src;genome=genomic;identified-by=Mahloro H. Serepa%3B Vincent M. Gray;isolation-source=entomopathogenic nematode Oscheius sp. MCB living in soil;mol_type=genomic DNA;nat-host=Oscheius sp. MCB;strain=MCB NZ_JPQY01000066.1 RefSeq gene 359 1342 . - . ID=gene-IY40_RS24205;Name=astE;gbkey=Gene;gene=astE;gene_biotype=protein_coding;locus_tag=IY40_RS24205;old_locus_tag=IY40_24695 NZ_JPQY01000066.1 Protein Homology CDS 359 1342 . - 0 ID=cds-WP_043143868.1;Parent=gene-IY40_RS24205;Dbxref=GenBank:WP_043143868.1;Name=WP_043143868.1;Ontology_term=GO:0006527,GO:0008270,GO:0009017;gbkey=CDS;gene=astE;go_function=zinc ion binding|0008270||IEA,succinylglutamate desuccinylase activity|0009017||IEA;go_process=L-arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012145563.1;locus_tag=IY40_RS24205;product=succinylglutamate desuccinylase;protein_id=WP_043143868.1;transl_table=11 NZ_JPQY01000066.1 RefSeq gene 1353 2693 . - . ID=gene-IY40_RS24210;Name=astB;gbkey=Gene;gene=astB;gene_biotype=protein_coding;locus_tag=IY40_RS24210;old_locus_tag=IY40_24700 NZ_JPQY01000066.1 Protein Homology CDS 1353 2693 . - 0 ID=cds-WP_043143870.1;Parent=gene-IY40_RS24210;Dbxref=GenBank:WP_043143870.1;Name=WP_043143870.1;Ontology_term=GO:0006527,GO:0009015;gbkey=CDS;gene=astB;go_function=N-succinylarginine dihydrolase activity|0009015||IEA;go_process=L-arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004934580.1;locus_tag=IY40_RS24210;product=N-succinylarginine dihydrolase;protein_id=WP_043143870.1;transl_table=11 NZ_JPQY01000066.1 RefSeq gene 2746 4218 . - . ID=gene-IY40_RS24215;Name=astD;gbkey=Gene;gene=astD;gene_biotype=protein_coding;locus_tag=IY40_RS24215;old_locus_tag=IY40_24705 NZ_JPQY01000066.1 Protein Homology CDS 2746 4218 . - 0 ID=cds-WP_043143883.1;Parent=gene-IY40_RS24215;Dbxref=GenBank:WP_043143883.1;Name=WP_043143883.1;Ontology_term=GO:0006527,GO:0043824;gbkey=CDS;gene=astD;go_function=succinylglutamate-semialdehyde dehydrogenase activity|0043824||IEA;go_process=L-arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004934583.1;locus_tag=IY40_RS24215;product=succinylglutamate-semialdehyde dehydrogenase;protein_id=WP_043143883.1;transl_table=11 NZ_JPQY01000066.1 RefSeq gene 4218 5252 . - . ID=gene-IY40_RS24220;Name=astA;gbkey=Gene;gene=astA;gene_biotype=protein_coding;locus_tag=IY40_RS24220;old_locus_tag=IY40_24710 NZ_JPQY01000066.1 Protein Homology CDS 4218 5252 . - 0 ID=cds-WP_025303179.1;Parent=gene-IY40_RS24220;Dbxref=GenBank:WP_025303179.1;Name=WP_025303179.1;Ontology_term=GO:0006527,GO:0008791;gbkey=CDS;gene=astA;go_function=arginine N-succinyltransferase activity|0008791||IEA;go_process=L-arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012145566.1;locus_tag=IY40_RS24220;product=arginine N-succinyltransferase;protein_id=WP_025303179.1;transl_table=11 NZ_JPQY01000066.1 RefSeq gene 5305 6519 . - . ID=gene-IY40_RS24225;Name=IY40_RS24225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS24225;old_locus_tag=IY40_24715 NZ_JPQY01000066.1 Protein Homology CDS 5305 6519 . - 0 ID=cds-WP_025303180.1;Parent=gene-IY40_RS24225;Dbxref=GenBank:WP_025303180.1;Name=WP_025303180.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019452865.1;locus_tag=IY40_RS24225;product=aspartate aminotransferase family protein;protein_id=WP_025303180.1;transl_table=11 NZ_JPQY01000066.1 RefSeq gene 7196 8170 . + . ID=gene-IY40_RS24230;Name=IY40_RS24230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS24230;old_locus_tag=IY40_24720 NZ_JPQY01000066.1 Protein Homology CDS 7196 8170 . + 0 ID=cds-WP_043143872.1;Parent=gene-IY40_RS24230;Dbxref=GenBank:WP_043143872.1;Name=WP_043143872.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006325970.1;locus_tag=IY40_RS24230;product=alpha/beta hydrolase;protein_id=WP_043143872.1;transl_table=11 NZ_JPQY01000066.1 RefSeq gene 8173 9141 . - . ID=gene-IY40_RS24235;Name=IY40_RS24235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS24235;old_locus_tag=IY40_24725 NZ_JPQY01000066.1 Protein Homology CDS 8173 9141 . - 0 ID=cds-WP_043143874.1;Parent=gene-IY40_RS24235;Dbxref=GenBank:WP_043143874.1;Name=WP_043143874.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015378177.1;locus_tag=IY40_RS24235;product=ABC transporter ATP-binding protein;protein_id=WP_043143874.1;transl_table=11 NZ_JPQY01000066.1 RefSeq gene 9131 10117 . - . ID=gene-IY40_RS24240;Name=IY40_RS24240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS24240;old_locus_tag=IY40_24730 NZ_JPQY01000066.1 Protein Homology CDS 9131 10117 . - 0 ID=cds-WP_043143876.1;Parent=gene-IY40_RS24240;Dbxref=GenBank:WP_043143876.1;Name=WP_043143876.1;Ontology_term=GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004934597.1;locus_tag=IY40_RS24240;product=ABC transporter ATP-binding protein;protein_id=WP_043143876.1;transl_table=11 NZ_JPQY01000066.1 RefSeq gene 10114 11064 . - . ID=gene-IY40_RS24245;Name=opp4C;gbkey=Gene;gene=opp4C;gene_biotype=protein_coding;locus_tag=IY40_RS24245;old_locus_tag=IY40_24735 NZ_JPQY01000066.1 Protein Homology CDS 10114 11064 . - 0 ID=cds-WP_043143878.1;Parent=gene-IY40_RS24245;Dbxref=GenBank:WP_043143878.1;Name=WP_043143878.1;Ontology_term=GO:0140359,GO:0043190;gbkey=CDS;gene=opp4C;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013813392.1;locus_tag=IY40_RS24245;product=oligopeptide ABC transporter permease;protein_id=WP_043143878.1;transl_table=11 NZ_JPQY01000066.1 RefSeq gene 11069 12025 . - . ID=gene-IY40_RS24250;Name=IY40_RS24250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS24250;old_locus_tag=IY40_24740 NZ_JPQY01000066.1 Protein Homology CDS 11069 12025 . - 0 ID=cds-WP_004934604.1;Parent=gene-IY40_RS24250;Dbxref=GenBank:WP_004934604.1;Name=WP_004934604.1;Ontology_term=GO:0055085;gbkey=CDS;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004945734.1;locus_tag=IY40_RS24250;product=ABC transporter permease;protein_id=WP_004934604.1;transl_table=11 NZ_JPQY01000066.1 RefSeq gene 12074 13729 . - . ID=gene-IY40_RS24255;Name=IY40_RS24255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS24255;old_locus_tag=IY40_24745 NZ_JPQY01000066.1 Protein Homology CDS 12074 13729 . - 0 ID=cds-WP_043143879.1;Parent=gene-IY40_RS24255;Dbxref=GenBank:WP_043143879.1;Name=WP_043143879.1;Ontology_term=GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016927378.1;locus_tag=IY40_RS24255;product=ABC transporter substrate-binding protein;protein_id=WP_043143879.1;transl_table=11 NZ_JPQY01000066.1 RefSeq gene 13917 15273 . - . ID=gene-IY40_RS24260;Name=IY40_RS24260;end_range=15273,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS24260;old_locus_tag=IY40_24750;partial=true NZ_JPQY01000066.1 Protein Homology CDS 13917 15273 . - 1 ID=cds-WP_043143881.1;Parent=gene-IY40_RS24260;Dbxref=GenBank:WP_043143881.1;Name=WP_043143881.1;Ontology_term=GO:0030170;end_range=15273,.;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017893142.1;locus_tag=IY40_RS24260;partial=true;product=aminotransferase-like domain-containing protein;protein_id=WP_043143881.1;transl_table=11 ##sequence-region NZ_JPQY01000067.1 1 1745 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=615 NZ_JPQY01000067.1 RefSeq region 1 1745 . + . ID=NZ_JPQY01000067.1:1..1745;Dbxref=taxon:615;collected-by=Mahloro H. Serepa%3B Vincent M. Gray;collection-date=2013-04-11;country=South Africa: North West Province;gbkey=Src;genome=genomic;identified-by=Mahloro H. Serepa%3B Vincent M. Gray;isolation-source=entomopathogenic nematode Oscheius sp. MCB living in soil;mol_type=genomic DNA;nat-host=Oscheius sp. MCB;strain=MCB NZ_JPQY01000067.1 RefSeq gene 97 1014 . + . ID=gene-IY40_RS24265;Name=IY40_RS24265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS24265;old_locus_tag=IY40_24755 NZ_JPQY01000067.1 Protein Homology CDS 97 1014 . + 0 ID=cds-WP_080287163.1;Parent=gene-IY40_RS24265;Dbxref=GenBank:WP_080287163.1;Name=WP_080287163.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012146818.1;locus_tag=IY40_RS24265;product=ParA family protein;protein_id=WP_080287163.1;transl_table=11 NZ_JPQY01000067.1 RefSeq gene 1011 1676 . + . ID=gene-IY40_RS26330;Name=IY40_RS26330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS26330 NZ_JPQY01000067.1 GeneMarkS-2+ CDS 1011 1676 . + 0 ID=cds-WP_043143889.1;Parent=gene-IY40_RS26330;Dbxref=GenBank:WP_043143889.1;Name=WP_043143889.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IY40_RS26330;product=hypothetical protein;protein_id=WP_043143889.1;transl_table=11 ##sequence-region NZ_JPQY01000068.1 1 22347 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=615 NZ_JPQY01000068.1 RefSeq region 1 22347 . + . ID=NZ_JPQY01000068.1:1..22347;Dbxref=taxon:615;collected-by=Mahloro H. Serepa%3B Vincent M. Gray;collection-date=2013-04-11;country=South Africa: North West Province;gbkey=Src;genome=genomic;identified-by=Mahloro H. Serepa%3B Vincent M. Gray;isolation-source=entomopathogenic nematode Oscheius sp. MCB living in soil;mol_type=genomic DNA;nat-host=Oscheius sp. MCB;strain=MCB NZ_JPQY01000068.1 RefSeq gene 421 2994 . - . ID=gene-IY40_RS24275;Name=clpB;gbkey=Gene;gene=clpB;gene_biotype=protein_coding;locus_tag=IY40_RS24275;old_locus_tag=IY40_24765 NZ_JPQY01000068.1 Protein Homology CDS 421 2994 . - 0 ID=cds-WP_025301647.1;Parent=gene-IY40_RS24275;Dbxref=GenBank:WP_025301647.1;Name=WP_025301647.1;Ontology_term=GO:0009408,GO:0042026,GO:0005524,GO:0016887;gbkey=CDS;gene=clpB;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=response to heat|0009408||IEA,protein refolding|0042026||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461591.1;locus_tag=IY40_RS24275;product=ATP-dependent chaperone ClpB;protein_id=WP_025301647.1;transl_table=11 NZ_JPQY01000068.1 RefSeq gene 3125 3856 . - . ID=gene-IY40_RS24280;Name=yfiH;gbkey=Gene;gene=yfiH;gene_biotype=protein_coding;locus_tag=IY40_RS24280;old_locus_tag=IY40_24770 NZ_JPQY01000068.1 Protein Homology CDS 3125 3856 . - 0 ID=cds-WP_025301646.1;Parent=gene-IY40_RS24280;Dbxref=GenBank:WP_025301646.1;Name=WP_025301646.1;Ontology_term=GO:0004000,GO:0004731,GO:0042803;gbkey=CDS;gene=yfiH;go_function=adenosine deaminase activity|0004000||IEA,purine-nucleoside phosphorylase activity|0004731||IEA,protein homodimerization activity|0042803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209471.1;locus_tag=IY40_RS24280;product=purine nucleoside phosphorylase YfiH;protein_id=WP_025301646.1;transl_table=11 NZ_JPQY01000068.1 RefSeq gene 3856 4833 . - . ID=gene-IY40_RS24285;Name=rluD;gbkey=Gene;gene=rluD;gene_biotype=protein_coding;locus_tag=IY40_RS24285;old_locus_tag=IY40_24775 NZ_JPQY01000068.1 Protein Homology CDS 3856 4833 . - 0 ID=cds-WP_028127833.1;Parent=gene-IY40_RS24285;Dbxref=GenBank:WP_028127833.1;Name=WP_028127833.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;gene=rluD;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016603421.1;locus_tag=IY40_RS24285;product=23S rRNA pseudouridine(1911/1915/1917) synthase RluD;protein_id=WP_028127833.1;transl_table=11 NZ_JPQY01000068.1 RefSeq gene 4965 5696 . + . ID=gene-IY40_RS24290;Name=bamD;gbkey=Gene;gene=bamD;gene_biotype=protein_coding;locus_tag=IY40_RS24290;old_locus_tag=IY40_24780 NZ_JPQY01000068.1 Protein Homology CDS 4965 5696 . + 0 ID=cds-WP_004932456.1;Parent=gene-IY40_RS24290;Dbxref=GenBank:WP_004932456.1;Name=WP_004932456.1;gbkey=CDS;gene=bamD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015376711.1;locus_tag=IY40_RS24290;product=outer membrane protein assembly factor BamD;protein_id=WP_004932456.1;transl_table=11 NZ_JPQY01000068.1 RefSeq gene 6009 6350 . + . ID=gene-IY40_RS24295;Name=raiA;gbkey=Gene;gene=raiA;gene_biotype=protein_coding;locus_tag=IY40_RS24295;old_locus_tag=IY40_24785 NZ_JPQY01000068.1 Protein Homology CDS 6009 6350 . + 0 ID=cds-WP_004932457.1;Parent=gene-IY40_RS24295;Dbxref=GenBank:WP_004932457.1;Name=WP_004932457.1;gbkey=CDS;gene=raiA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004950387.1;locus_tag=IY40_RS24295;product=ribosome-associated translation inhibitor RaiA;protein_id=WP_004932457.1;transl_table=11 NZ_JPQY01000068.1 cmsearch sequence_feature 6473 6599 . + . ID=id-NZ_JPQY01000068.1:6473..6599;Dbxref=RFAM:RF01859;Note=Phe leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.5 NZ_JPQY01000068.1 RefSeq gene 6474 6521 . + . ID=gene-IY40_RS26135;Name=IY40_RS26135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS26135 NZ_JPQY01000068.1 Protein Homology CDS 6474 6521 . + 0 ID=cds-WP_101428074.1;Parent=gene-IY40_RS26135;Dbxref=GenBank:WP_101428074.1;Name=WP_101428074.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311488.1;locus_tag=IY40_RS26135;product=hypothetical protein;protein_id=WP_101428074.1;transl_table=11 NZ_JPQY01000068.1 RefSeq gene 6642 7799 . + . ID=gene-IY40_RS24300;Name=pheA;gbkey=Gene;gene=pheA;gene_biotype=protein_coding;locus_tag=IY40_RS24300;old_locus_tag=IY40_24790 NZ_JPQY01000068.1 Protein Homology CDS 6642 7799 . + 0 ID=cds-WP_025301644.1;Parent=gene-IY40_RS24300;Dbxref=GenBank:WP_025301644.1;Name=WP_025301644.1;Ontology_term=GO:0009094,GO:0046417,GO:0004106,GO:0004664;gbkey=CDS;gene=pheA;go_function=chorismate mutase activity|0004106||IEA,prephenate dehydratase activity|0004664||IEA;go_process=L-phenylalanine biosynthetic process|0009094||IEA,chorismate metabolic process|0046417||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016929014.1;locus_tag=IY40_RS24300;product=bifunctional chorismate mutase/prephenate dehydratase;protein_id=WP_025301644.1;transl_table=11 NZ_JPQY01000068.1 RefSeq gene 7855 8976 . - . ID=gene-IY40_RS24305;Name=tyrA;gbkey=Gene;gene=tyrA;gene_biotype=protein_coding;locus_tag=IY40_RS24305;old_locus_tag=IY40_24795 NZ_JPQY01000068.1 Protein Homology CDS 7855 8976 . - 0 ID=cds-WP_043143894.1;Parent=gene-IY40_RS24305;Dbxref=GenBank:WP_043143894.1;Name=WP_043143894.1;Ontology_term=GO:0006571,GO:0046417,GO:0004106,GO:0004665,GO:0008977;gbkey=CDS;gene=tyrA;go_function=chorismate mutase activity|0004106||IEA,prephenate dehydrogenase (NADP+) activity|0004665||IEA,prephenate dehydrogenase (NAD+) activity|0008977||IEA;go_process=L-tyrosine biosynthetic process|0006571||IEA,chorismate metabolic process|0046417||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311490.1;locus_tag=IY40_RS24305;product=bifunctional chorismate mutase/prephenate dehydrogenase;protein_id=WP_043143894.1;transl_table=11 NZ_JPQY01000068.1 RefSeq gene 8980 10056 . - . ID=gene-IY40_RS24310;Name=IY40_RS24310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS24310;old_locus_tag=IY40_24800 NZ_JPQY01000068.1 Protein Homology CDS 8980 10056 . - 0 ID=cds-WP_025301643.1;Parent=gene-IY40_RS24310;Dbxref=GenBank:WP_025301643.1;Name=WP_025301643.1;Ontology_term=GO:0009073,GO:0016832;gbkey=CDS;go_function=aldehyde-lyase activity|0016832||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004932466.1;locus_tag=IY40_RS24310;product=3-deoxy-7-phosphoheptulonate synthase;protein_id=WP_025301643.1;transl_table=11 NZ_JPQY01000068.1 RefSeq gene 10563 11327 . + . ID=gene-IY40_RS24315;Name=IY40_RS24315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS24315;old_locus_tag=IY40_24805 NZ_JPQY01000068.1 Protein Homology CDS 10563 11327 . + 0 ID=cds-WP_025301642.1;Parent=gene-IY40_RS24315;Dbxref=GenBank:WP_025301642.1;Name=WP_025301642.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004716690.1;locus_tag=IY40_RS24315;product=DUF481 domain-containing protein;protein_id=WP_025301642.1;transl_table=11 NZ_JPQY01000068.1 RefSeq gene 11577 11798 . + . ID=gene-IY40_RS24320;Name=IY40_RS24320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS24320;old_locus_tag=IY40_24810 NZ_JPQY01000068.1 Protein Homology CDS 11577 11798 . + 0 ID=cds-WP_025301641.1;Parent=gene-IY40_RS24320;Dbxref=GenBank:WP_025301641.1;Name=WP_025301641.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004932472.1;locus_tag=IY40_RS24320;product=HP1 family phage holin;protein_id=WP_025301641.1;transl_table=11 NZ_JPQY01000068.1 RefSeq gene 11782 12297 . + . ID=gene-IY40_RS24325;Name=IY40_RS24325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS24325;old_locus_tag=IY40_24815 NZ_JPQY01000068.1 Protein Homology CDS 11782 12297 . + 0 ID=cds-WP_025301640.1;Parent=gene-IY40_RS24325;Dbxref=GenBank:WP_025301640.1;Name=WP_025301640.1;Ontology_term=GO:0009253,GO:0016998,GO:0042742,GO:0003796;gbkey=CDS;go_function=lysozyme activity|0003796||IEA;go_process=peptidoglycan catabolic process|0009253||IEA,cell wall macromolecule catabolic process|0016998||IEA,defense response to bacterium|0042742||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019455137.1;locus_tag=IY40_RS24325;product=lysozyme;protein_id=WP_025301640.1;transl_table=11 NZ_JPQY01000068.1 RefSeq gene 12361 12588 . + . ID=gene-IY40_RS24330;Name=IY40_RS24330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS24330;old_locus_tag=IY40_24820 NZ_JPQY01000068.1 Protein Homology CDS 12361 12588 . + 0 ID=cds-WP_025301639.1;Parent=gene-IY40_RS24330;Dbxref=GenBank:WP_025301639.1;Name=WP_025301639.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004955147.1;locus_tag=IY40_RS24330;product=ogr/Delta-like zinc finger family protein;protein_id=WP_025301639.1;transl_table=11 NZ_JPQY01000068.1 RefSeq gene 12732 13088 . - . ID=gene-IY40_RS24335;Name=rplS;gbkey=Gene;gene=rplS;gene_biotype=protein_coding;locus_tag=IY40_RS24335;old_locus_tag=IY40_24825 NZ_JPQY01000068.1 Protein Homology CDS 12732 13088 . - 0 ID=cds-WP_025301638.1;Parent=gene-IY40_RS24335;Dbxref=GenBank:WP_025301638.1;Name=WP_025301638.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplS;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004932484.1;locus_tag=IY40_RS24335;product=50S ribosomal protein L19;protein_id=WP_025301638.1;transl_table=11 NZ_JPQY01000068.1 RefSeq gene 13137 13904 . - . ID=gene-IY40_RS24340;Name=trmD;gbkey=Gene;gene=trmD;gene_biotype=protein_coding;locus_tag=IY40_RS24340;old_locus_tag=IY40_24830 NZ_JPQY01000068.1 Protein Homology CDS 13137 13904 . - 0 ID=cds-WP_043143896.1;Parent=gene-IY40_RS24340;Dbxref=GenBank:WP_043143896.1;Name=WP_043143896.1;Ontology_term=GO:0030488,GO:0052906;gbkey=CDS;gene=trmD;go_function=tRNA (guanine(37)-N1)-methyltransferase activity|0052906||IEA;go_process=tRNA methylation|0030488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015671005.1;locus_tag=IY40_RS24340;product=tRNA (guanosine(37)-N1)-methyltransferase TrmD;protein_id=WP_043143896.1;transl_table=11 NZ_JPQY01000068.1 RefSeq gene 13957 14505 . - . ID=gene-IY40_RS24345;Name=rimM;gbkey=Gene;gene=rimM;gene_biotype=protein_coding;locus_tag=IY40_RS24345;old_locus_tag=IY40_24835 NZ_JPQY01000068.1 Protein Homology CDS 13957 14505 . - 0 ID=cds-WP_019455135.1;Parent=gene-IY40_RS24345;Dbxref=GenBank:WP_019455135.1;Name=WP_019455135.1;Note=Essential for efficient processing of 16S rRNA;Ontology_term=GO:0006364,GO:0043022,GO:0005840;gbkey=CDS;gene=rimM;go_component=ribosome|0005840||IEA;go_function=ribosome binding|0043022||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000043333.1;locus_tag=IY40_RS24345;product=ribosome maturation factor RimM;protein_id=WP_019455135.1;transl_table=11 NZ_JPQY01000068.1 RefSeq gene 14524 14772 . - . ID=gene-IY40_RS24350;Name=rpsP;gbkey=Gene;gene=rpsP;gene_biotype=protein_coding;locus_tag=IY40_RS24350;old_locus_tag=IY40_24840 NZ_JPQY01000068.1 Protein Homology CDS 14524 14772 . - 0 ID=cds-WP_004932501.1;Parent=gene-IY40_RS24350;Dbxref=GenBank:WP_004932501.1;Name=WP_004932501.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsP;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209458.1;locus_tag=IY40_RS24350;product=30S ribosomal protein S16;protein_id=WP_004932501.1;transl_table=11 NZ_JPQY01000068.1 RefSeq gene 14987 16348 . - . ID=gene-IY40_RS24355;Name=ffh;gbkey=Gene;gene=ffh;gene_biotype=protein_coding;locus_tag=IY40_RS24355;old_locus_tag=IY40_24845 NZ_JPQY01000068.1 Protein Homology CDS 14987 16348 . - 0 ID=cds-WP_004932504.1;Parent=gene-IY40_RS24355;Dbxref=GenBank:WP_004932504.1;Name=WP_004932504.1;Ontology_term=GO:0009306,GO:0003924,GO:0005048,GO:0005525,GO:0048501;gbkey=CDS;gene=ffh;go_component=signal recognition particle%2C plasma membrane targeting|0048501||IEA;go_function=GTPase activity|0003924||IEA,signal sequence binding|0005048||IEA,GTP binding|0005525||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130432.1;locus_tag=IY40_RS24355;product=signal recognition particle protein;protein_id=WP_004932504.1;transl_table=11 NZ_JPQY01000068.1 RefSeq gene 16518 17309 . + . ID=gene-IY40_RS24360;Name=IY40_RS24360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS24360;old_locus_tag=IY40_24850 NZ_JPQY01000068.1 Protein Homology CDS 16518 17309 . + 0 ID=cds-WP_004932506.1;Parent=gene-IY40_RS24360;Dbxref=GenBank:WP_004932506.1;Name=WP_004932506.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015671002.1;locus_tag=IY40_RS24360;product=cytochrome C assembly family protein;protein_id=WP_004932506.1;transl_table=11 NZ_JPQY01000068.1 RefSeq gene 17352 18641 . + . ID=gene-IY40_RS24365;Name=IY40_RS24365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS24365;old_locus_tag=IY40_24855 NZ_JPQY01000068.1 Protein Homology CDS 17352 18641 . + 0 ID=cds-WP_043143897.1;Parent=gene-IY40_RS24365;Dbxref=GenBank:WP_043143897.1;Name=WP_043143897.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016929024.1;locus_tag=IY40_RS24365;product=HlyC/CorC family transporter;protein_id=WP_043143897.1;transl_table=11 NZ_JPQY01000068.1 RefSeq gene 18708 19223 . - . ID=gene-IY40_RS24370;Name=luxS;gbkey=Gene;gene=luxS;gene_biotype=protein_coding;locus_tag=IY40_RS24370;old_locus_tag=IY40_24860 NZ_JPQY01000068.1 Protein Homology CDS 18708 19223 . - 0 ID=cds-WP_019455133.1;Parent=gene-IY40_RS24370;Dbxref=GenBank:WP_019455133.1;Name=WP_019455133.1;gbkey=CDS;gene=luxS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008458247.1;locus_tag=IY40_RS24370;product=S-ribosylhomocysteine lyase;protein_id=WP_019455133.1;transl_table=11 NZ_JPQY01000068.1 RefSeq gene 19390 20952 . - . ID=gene-IY40_RS24375;Name=gshA;gbkey=Gene;gene=gshA;gene_biotype=protein_coding;locus_tag=IY40_RS24375;old_locus_tag=IY40_24865 NZ_JPQY01000068.1 Protein Homology CDS 19390 20952 . - 0 ID=cds-WP_043143899.1;Parent=gene-IY40_RS24375;Dbxref=GenBank:WP_043143899.1;Name=WP_043143899.1;Ontology_term=GO:0006750,GO:0004357;gbkey=CDS;gene=gshA;go_function=glutamate-cysteine ligase activity|0004357||IEA;go_process=glutathione biosynthetic process|0006750||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015376703.1;locus_tag=IY40_RS24375;product=glutamate--cysteine ligase;protein_id=WP_043143899.1;transl_table=11 NZ_JPQY01000068.1 RefSeq gene 21035 21463 . - . ID=gene-IY40_RS24380;Name=IY40_RS24380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS24380;old_locus_tag=IY40_24870 NZ_JPQY01000068.1 Protein Homology CDS 21035 21463 . - 0 ID=cds-WP_004932520.1;Parent=gene-IY40_RS24380;Dbxref=GenBank:WP_004932520.1;Name=WP_004932520.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209451.1;locus_tag=IY40_RS24380;product=YqaA family protein;protein_id=WP_004932520.1;transl_table=11 NZ_JPQY01000068.1 RefSeq gene 21460 22026 . - . ID=gene-IY40_RS24385;Name=yqaB;gbkey=Gene;gene=yqaB;gene_biotype=protein_coding;locus_tag=IY40_RS24385;old_locus_tag=IY40_24875 NZ_JPQY01000068.1 Protein Homology CDS 21460 22026 . - 0 ID=cds-WP_025301636.1;Parent=gene-IY40_RS24385;Dbxref=GenBank:WP_025301636.1;Name=WP_025301636.1;gbkey=CDS;gene=yqaB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005278443.1;locus_tag=IY40_RS24385;product=fructose-1-phosphate/6-phosphogluconate phosphatase;protein_id=WP_025301636.1;transl_table=11 NZ_JPQY01000068.1 RefSeq gene 22198 22274 . - . ID=gene-IY40_RS24390;Name=IY40_RS24390;gbkey=Gene;gene_biotype=tRNA;locus_tag=IY40_RS24390;old_locus_tag=IY40_24880 NZ_JPQY01000068.1 tRNAscan-SE tRNA 22198 22274 . - . ID=rna-IY40_RS24390;Parent=gene-IY40_RS24390;anticodon=(pos:complement(22238..22240));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=IY40_RS24390;product=tRNA-Arg NZ_JPQY01000068.1 tRNAscan-SE exon 22198 22274 . - . ID=exon-IY40_RS24390-1;Parent=rna-IY40_RS24390;anticodon=(pos:complement(22238..22240));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=IY40_RS24390;product=tRNA-Arg ##sequence-region NZ_JPQY01000069.1 1 1166 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=615 NZ_JPQY01000069.1 RefSeq region 1 1166 . + . ID=NZ_JPQY01000069.1:1..1166;Dbxref=taxon:615;collected-by=Mahloro H. Serepa%3B Vincent M. Gray;collection-date=2013-04-11;country=South Africa: North West Province;gbkey=Src;genome=genomic;identified-by=Mahloro H. Serepa%3B Vincent M. Gray;isolation-source=entomopathogenic nematode Oscheius sp. MCB living in soil;mol_type=genomic DNA;nat-host=Oscheius sp. MCB;strain=MCB NZ_JPQY01000069.1 RefSeq gene 1 1005 . - . ID=gene-IY40_RS24395;Name=IY40_RS24395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS24395;old_locus_tag=IY40_24885;partial=true;start_range=.,1 NZ_JPQY01000069.1 Protein Homology CDS 1 1005 . - 0 ID=cds-WP_235211394.1;Parent=gene-IY40_RS24395;Dbxref=GenBank:WP_235211394.1;Name=WP_235211394.1;Ontology_term=GO:0006508,GO:0008236;gbkey=CDS;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019846676.1;locus_tag=IY40_RS24395;partial=true;product=S8 family serine peptidase;protein_id=WP_235211394.1;start_range=.,1;transl_table=11 ##sequence-region NZ_JPQY01000070.1 1 3258 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=615 NZ_JPQY01000070.1 RefSeq region 1 3258 . + . ID=NZ_JPQY01000070.1:1..3258;Dbxref=taxon:615;collected-by=Mahloro H. Serepa%3B Vincent M. Gray;collection-date=2013-04-11;country=South Africa: North West Province;gbkey=Src;genome=genomic;identified-by=Mahloro H. Serepa%3B Vincent M. Gray;isolation-source=entomopathogenic nematode Oscheius sp. MCB living in soil;mol_type=genomic DNA;nat-host=Oscheius sp. MCB;strain=MCB NZ_JPQY01000070.1 RefSeq gene 49 1452 . - . ID=gene-IY40_RS24400;Name=wcaJ;gbkey=Gene;gene=wcaJ;gene_biotype=protein_coding;locus_tag=IY40_RS24400;old_locus_tag=IY40_24890 NZ_JPQY01000070.1 Protein Homology CDS 49 1452 . - 0 ID=cds-WP_043143913.1;Parent=gene-IY40_RS24400;Dbxref=GenBank:WP_043143913.1;Name=WP_043143913.1;gbkey=CDS;gene=wcaJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016537230.1;locus_tag=IY40_RS24400;product=undecaprenyl-phosphate glucose phosphotransferase;protein_id=WP_043143913.1;transl_table=11 NZ_JPQY01000070.1 RefSeq gene 1610 2704 . - . ID=gene-IY40_RS25640;Name=IY40_RS25640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS25640 NZ_JPQY01000070.1 Protein Homology CDS 1610 2704 . - 0 ID=cds-WP_080287164.1;Parent=gene-IY40_RS25640;Dbxref=GenBank:WP_080287164.1;Name=WP_080287164.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015377231.1;locus_tag=IY40_RS25640;product=glycosyltransferase;protein_id=WP_080287164.1;transl_table=11 NZ_JPQY01000070.1 RefSeq gene 2726 3258 . - . ID=gene-IY40_RS24410;Name=IY40_RS24410;end_range=3258,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS24410;old_locus_tag=IY40_24900;partial=true NZ_JPQY01000070.1 Protein Homology CDS 2726 3258 . - 2 ID=cds-WP_043143914.1;Parent=gene-IY40_RS24410;Dbxref=GenBank:WP_043143914.1;Name=WP_043143914.1;Ontology_term=GO:0009101,GO:0016757;end_range=3258,.;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=glycoprotein biosynthetic process|0009101||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006320954.1;locus_tag=IY40_RS24410;partial=true;product=glycosyltransferase family 4 protein;protein_id=WP_043143914.1;transl_table=11 ##sequence-region NZ_JPQY01000071.1 1 4011 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=615 NZ_JPQY01000071.1 RefSeq region 1 4011 . + . ID=NZ_JPQY01000071.1:1..4011;Dbxref=taxon:615;collected-by=Mahloro H. Serepa%3B Vincent M. Gray;collection-date=2013-04-11;country=South Africa: North West Province;gbkey=Src;genome=genomic;identified-by=Mahloro H. Serepa%3B Vincent M. Gray;isolation-source=entomopathogenic nematode Oscheius sp. MCB living in soil;mol_type=genomic DNA;nat-host=Oscheius sp. MCB;strain=MCB NZ_JPQY01000071.1 RefSeq gene 672 884 . - . ID=gene-IY40_RS24415;Name=IY40_RS24415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS24415;old_locus_tag=IY40_24905 NZ_JPQY01000071.1 Protein Homology CDS 672 884 . - 0 ID=cds-WP_025302319.1;Parent=gene-IY40_RS24415;Dbxref=GenBank:WP_025302319.1;Name=WP_025302319.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004928089.1;locus_tag=IY40_RS24415;product=hypothetical protein;protein_id=WP_025302319.1;transl_table=11 NZ_JPQY01000071.1 RefSeq gene 1113 1200 . - . ID=gene-IY40_RS24420;Name=IY40_RS24420;gbkey=Gene;gene_biotype=tRNA;locus_tag=IY40_RS24420;old_locus_tag=IY40_24910 NZ_JPQY01000071.1 tRNAscan-SE tRNA 1113 1200 . - . ID=rna-IY40_RS24420;Parent=gene-IY40_RS24420;anticodon=(pos:complement(1164..1166));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=IY40_RS24420;product=tRNA-Ser NZ_JPQY01000071.1 tRNAscan-SE exon 1113 1200 . - . ID=exon-IY40_RS24420-1;Parent=rna-IY40_RS24420;anticodon=(pos:complement(1164..1166));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=IY40_RS24420;product=tRNA-Ser NZ_JPQY01000071.1 RefSeq gene 1429 2088 . + . ID=gene-IY40_RS24425;Name=yccA;gbkey=Gene;gene=yccA;gene_biotype=protein_coding;locus_tag=IY40_RS24425;old_locus_tag=IY40_24915 NZ_JPQY01000071.1 Protein Homology CDS 1429 2088 . + 0 ID=cds-WP_043143915.1;Parent=gene-IY40_RS24425;Dbxref=GenBank:WP_043143915.1;Name=WP_043143915.1;gbkey=CDS;gene=yccA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004942825.1;locus_tag=IY40_RS24425;product=FtsH protease modulator YccA;protein_id=WP_043143915.1;transl_table=11 NZ_JPQY01000071.1 RefSeq gene 2200 2529 . + . ID=gene-IY40_RS24430;Name=tusE;gbkey=Gene;gene=tusE;gene_biotype=protein_coding;locus_tag=IY40_RS24430;old_locus_tag=IY40_24920 NZ_JPQY01000071.1 Protein Homology CDS 2200 2529 . + 0 ID=cds-WP_004928095.1;Parent=gene-IY40_RS24430;Dbxref=GenBank:WP_004928095.1;Name=WP_004928095.1;gbkey=CDS;gene=tusE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005970590.1;locus_tag=IY40_RS24430;product=sulfurtransferase TusE;protein_id=WP_004928095.1;transl_table=11 NZ_JPQY01000071.1 RefSeq gene 2564 2842 . - . ID=gene-IY40_RS24435;Name=yccX;gbkey=Gene;gene=yccX;gene_biotype=protein_coding;locus_tag=IY40_RS24435;old_locus_tag=IY40_24925 NZ_JPQY01000071.1 Protein Homology CDS 2564 2842 . - 0 ID=cds-WP_043143916.1;Parent=gene-IY40_RS24435;Dbxref=GenBank:WP_043143916.1;Name=WP_043143916.1;Ontology_term=GO:0003998;gbkey=CDS;gene=yccX;go_function=acylphosphatase activity|0003998||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012006192.1;locus_tag=IY40_RS24435;product=acylphosphatase;protein_id=WP_043143916.1;transl_table=11 NZ_JPQY01000071.1 RefSeq gene 3001 3963 . - . ID=gene-IY40_RS24440;Name=IY40_RS24440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS24440;old_locus_tag=IY40_24930 NZ_JPQY01000071.1 Protein Homology CDS 3001 3963 . - 0 ID=cds-WP_043143917.1;Parent=gene-IY40_RS24440;Dbxref=GenBank:WP_043143917.1;Name=WP_043143917.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016928279.1;locus_tag=IY40_RS24440;product=acyltransferase family protein;protein_id=WP_043143917.1;transl_table=11 ##sequence-region NZ_JPQY01000072.1 1 2582 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=615 NZ_JPQY01000072.1 RefSeq region 1 2582 . + . ID=NZ_JPQY01000072.1:1..2582;Dbxref=taxon:615;collected-by=Mahloro H. Serepa%3B Vincent M. Gray;collection-date=2013-04-11;country=South Africa: North West Province;gbkey=Src;genome=genomic;identified-by=Mahloro H. Serepa%3B Vincent M. Gray;isolation-source=entomopathogenic nematode Oscheius sp. MCB living in soil;mol_type=genomic DNA;nat-host=Oscheius sp. MCB;strain=MCB NZ_JPQY01000072.1 RefSeq pseudogene 1 655 . - . ID=gene-IY40_RS26140;Name=IY40_RS26140;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IY40_RS26140;partial=true;pseudo=true;start_range=.,1 NZ_JPQY01000072.1 Protein Homology CDS 1 655 . - 0 ID=cds-IY40_RS26140;Parent=gene-IY40_RS26140;Note=frameshifted%3B incomplete%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558235.1;locus_tag=IY40_RS26140;partial=true;product=transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_JPQY01000072.1 RefSeq pseudogene 811 1025 . + . ID=gene-IY40_RS26435;Name=IY40_RS26435;end_range=1025,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IY40_RS26435;partial=true;pseudo=true;start_range=.,811 NZ_JPQY01000072.1 Protein Homology CDS 811 1025 . + 0 ID=cds-IY40_RS26435;Parent=gene-IY40_RS26435;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=1025,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612091.1;locus_tag=IY40_RS26435;partial=true;product=IS3 family transposase;pseudo=true;start_range=.,811;transl_table=11 NZ_JPQY01000072.1 RefSeq pseudogene 1248 1385 . - . ID=gene-IY40_RS26150;Name=IY40_RS26150;end_range=1385,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IY40_RS26150;partial=true;pseudo=true;start_range=.,1248 NZ_JPQY01000072.1 Protein Homology CDS 1248 1385 . - 0 ID=cds-IY40_RS26150;Parent=gene-IY40_RS26150;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=1385,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004953852.1;locus_tag=IY40_RS26150;partial=true;product=DUF4113 domain-containing protein;pseudo=true;start_range=.,1248;transl_table=11 NZ_JPQY01000072.1 RefSeq pseudogene 1392 1589 . + . ID=gene-IY40_RS24450;Name=IY40_RS24450;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IY40_RS24450;old_locus_tag=IY40_24940;partial=true;pseudo=true;start_range=.,1392 NZ_JPQY01000072.1 Protein Homology CDS 1392 1589 . + 0 ID=cds-IY40_RS24450;Parent=gene-IY40_RS24450;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_025243830.1;locus_tag=IY40_RS24450;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1392;transl_table=11 NZ_JPQY01000072.1 RefSeq gene 1600 2148 . - . ID=gene-IY40_RS24455;Name=IY40_RS24455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS24455;old_locus_tag=IY40_24945 NZ_JPQY01000072.1 GeneMarkS-2+ CDS 1600 2148 . - 0 ID=cds-WP_152561320.1;Parent=gene-IY40_RS24455;Dbxref=GenBank:WP_152561320.1;Name=WP_152561320.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IY40_RS24455;product=hypothetical protein;protein_id=WP_152561320.1;transl_table=11 NZ_JPQY01000072.1 RefSeq pseudogene 2429 2515 . - . ID=gene-IY40_RS26575;Name=IY40_RS26575;end_range=2515,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IY40_RS26575;partial=true;pseudo=true NZ_JPQY01000072.1 Protein Homology CDS 2429 2515 . - 0 ID=cds-IY40_RS26575;Parent=gene-IY40_RS26575;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=2515,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229637.1;locus_tag=IY40_RS26575;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region NZ_JPQY01000073.1 1 1480 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=615 NZ_JPQY01000073.1 RefSeq region 1 1480 . + . ID=NZ_JPQY01000073.1:1..1480;Dbxref=taxon:615;collected-by=Mahloro H. Serepa%3B Vincent M. Gray;collection-date=2013-04-11;country=South Africa: North West Province;gbkey=Src;genome=genomic;identified-by=Mahloro H. Serepa%3B Vincent M. Gray;isolation-source=entomopathogenic nematode Oscheius sp. MCB living in soil;mol_type=genomic DNA;nat-host=Oscheius sp. MCB;strain=MCB NZ_JPQY01000073.1 RefSeq gene 153 416 . + . ID=gene-IY40_RS24460;Name=IY40_RS24460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS24460;old_locus_tag=IY40_24955 NZ_JPQY01000073.1 Protein Homology CDS 153 416 . + 0 ID=cds-WP_043143926.1;Parent=gene-IY40_RS24460;Dbxref=GenBank:WP_043143926.1;Name=WP_043143926.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016260159.1;locus_tag=IY40_RS24460;product=ParE family toxin-like protein;protein_id=WP_043143926.1;transl_table=11 NZ_JPQY01000073.1 RefSeq gene 530 1480 . + . ID=gene-IY40_RS24465;Name=IY40_RS24465;end_range=1480,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS24465;old_locus_tag=IY40_24960;partial=true NZ_JPQY01000073.1 Protein Homology CDS 530 1480 . + 0 ID=cds-WP_043143928.1;Parent=gene-IY40_RS24465;Dbxref=GenBank:WP_043143928.1;Name=WP_043143928.1;end_range=1480,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013060255.1;locus_tag=IY40_RS24465;partial=true;product=STY4528 family pathogenicity island replication protein;protein_id=WP_043143928.1;transl_table=11 ##sequence-region NZ_JPQY01000074.1 1 2025 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=615 NZ_JPQY01000074.1 RefSeq region 1 2025 . + . ID=NZ_JPQY01000074.1:1..2025;Dbxref=taxon:615;collected-by=Mahloro H. Serepa%3B Vincent M. Gray;collection-date=2013-04-11;country=South Africa: North West Province;gbkey=Src;genome=genomic;identified-by=Mahloro H. Serepa%3B Vincent M. Gray;isolation-source=entomopathogenic nematode Oscheius sp. MCB living in soil;mol_type=genomic DNA;nat-host=Oscheius sp. MCB;strain=MCB NZ_JPQY01000074.1 RefSeq gene 32 1069 . - . ID=gene-IY40_RS24470;Name=IY40_RS24470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS24470;old_locus_tag=IY40_24965 NZ_JPQY01000074.1 Protein Homology CDS 32 1069 . - 0 ID=cds-WP_043143932.1;Parent=gene-IY40_RS24470;Dbxref=GenBank:WP_043143932.1;Name=WP_043143932.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019846677.1;locus_tag=IY40_RS24470;product=AAA family ATPase;protein_id=WP_043143932.1;transl_table=11 NZ_JPQY01000074.1 RefSeq gene 1453 2025 . + . ID=gene-IY40_RS24475;Name=pilL2;end_range=2025,.;gbkey=Gene;gene=pilL2;gene_biotype=protein_coding;locus_tag=IY40_RS24475;old_locus_tag=IY40_24970;partial=true NZ_JPQY01000074.1 Protein Homology CDS 1453 2025 . + 0 ID=cds-WP_043143933.1;Parent=gene-IY40_RS24475;Dbxref=GenBank:WP_043143933.1;Name=WP_043143933.1;end_range=2025,.;gbkey=CDS;gene=pilL2;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016191740.1;locus_tag=IY40_RS24475;partial=true;product=PFGI-1 class ICE element type IV pilus protein PilL2;protein_id=WP_043143933.1;transl_table=11 ##sequence-region NZ_JPQY01000075.1 1 2011 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=615 NZ_JPQY01000075.1 RefSeq region 1 2011 . + . ID=NZ_JPQY01000075.1:1..2011;Dbxref=taxon:615;collected-by=Mahloro H. Serepa%3B Vincent M. Gray;collection-date=2013-04-11;country=South Africa: North West Province;gbkey=Src;genome=genomic;identified-by=Mahloro H. Serepa%3B Vincent M. Gray;isolation-source=entomopathogenic nematode Oscheius sp. MCB living in soil;mol_type=genomic DNA;nat-host=Oscheius sp. MCB;strain=MCB NZ_JPQY01000075.1 RefSeq pseudogene 1 728 . - . ID=gene-IY40_RS24480;Name=IY40_RS24480;end_range=728,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IY40_RS24480;partial=true;pseudo=true;start_range=.,1 NZ_JPQY01000075.1 Protein Homology CDS 1 728 . - 0 ID=cds-IY40_RS24480;Parent=gene-IY40_RS24480;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0030246;end_range=728,.;gbkey=CDS;go_function=carbohydrate binding|0030246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016927809.1;locus_tag=IY40_RS24480;partial=true;product=RHS repeat domain-containing protein;pseudo=true;start_range=.,1;transl_table=11 NZ_JPQY01000075.1 RefSeq gene 878 1231 . - . ID=gene-IY40_RS24485;Name=IY40_RS24485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS24485;old_locus_tag=IY40_24980 NZ_JPQY01000075.1 Protein Homology CDS 878 1231 . - 0 ID=cds-WP_043143939.1;Parent=gene-IY40_RS24485;Dbxref=GenBank:WP_043143939.1;Name=WP_043143939.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016927808.1;locus_tag=IY40_RS24485;product=hypothetical protein;protein_id=WP_043143939.1;transl_table=11 NZ_JPQY01000075.1 RefSeq gene 1235 2011 . - . ID=gene-IY40_RS25655;Name=IY40_RS25655;end_range=2011,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS25655;partial=true NZ_JPQY01000075.1 Protein Homology CDS 1235 2011 . - 0 ID=cds-WP_200877960.1;Parent=gene-IY40_RS25655;Dbxref=GenBank:WP_200877960.1;Name=WP_200877960.1;Ontology_term=GO:0030246;end_range=2011,.;gbkey=CDS;go_function=carbohydrate binding|0030246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016927809.1;locus_tag=IY40_RS25655;partial=true;product=RHS repeat domain-containing protein;protein_id=WP_200877960.1;transl_table=11 ##sequence-region NZ_JPQY01000076.1 1 3569 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=615 NZ_JPQY01000076.1 RefSeq region 1 3569 . + . ID=NZ_JPQY01000076.1:1..3569;Dbxref=taxon:615;collected-by=Mahloro H. Serepa%3B Vincent M. Gray;collection-date=2013-04-11;country=South Africa: North West Province;gbkey=Src;genome=genomic;identified-by=Mahloro H. Serepa%3B Vincent M. Gray;isolation-source=entomopathogenic nematode Oscheius sp. MCB living in soil;mol_type=genomic DNA;nat-host=Oscheius sp. MCB;strain=MCB NZ_JPQY01000076.1 RefSeq gene 1 2356 . - . ID=gene-IY40_RS24495;Name=IY40_RS24495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS24495;old_locus_tag=IY40_24990;partial=true;start_range=.,1 NZ_JPQY01000076.1 Protein Homology CDS 1 2356 . - 0 ID=cds-WP_043143945.1;Parent=gene-IY40_RS24495;Dbxref=GenBank:WP_043143945.1;Name=WP_043143945.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016191725.1;locus_tag=IY40_RS24495;partial=true;product=conjugative transfer ATPase;protein_id=WP_043143945.1;start_range=.,1;transl_table=11 NZ_JPQY01000076.1 RefSeq gene 2356 2781 . - . ID=gene-IY40_RS24500;Name=IY40_RS24500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS24500;old_locus_tag=IY40_24995 NZ_JPQY01000076.1 Protein Homology CDS 2356 2781 . - 0 ID=cds-WP_043143947.1;Parent=gene-IY40_RS24500;Dbxref=GenBank:WP_043143947.1;Name=WP_043143947.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013811177.1;locus_tag=IY40_RS24500;product=TIGR03751 family conjugal transfer lipoprotein;protein_id=WP_043143947.1;transl_table=11 NZ_JPQY01000076.1 RefSeq gene 2931 3569 . - . ID=gene-IY40_RS24505;Name=IY40_RS24505;end_range=3569,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS24505;old_locus_tag=IY40_25000;partial=true NZ_JPQY01000076.1 Protein Homology CDS 2931 3569 . - 0 ID=cds-WP_043143948.1;Parent=gene-IY40_RS24505;Dbxref=GenBank:WP_043143948.1;Name=WP_043143948.1;Ontology_term=GO:0005886;end_range=3569,.;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013811175.1;locus_tag=IY40_RS24505;partial=true;product=TIGR03752 family integrating conjugative element protein;protein_id=WP_043143948.1;transl_table=11 ##sequence-region NZ_JPQY01000077.1 1 868 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=615 NZ_JPQY01000077.1 RefSeq region 1 868 . + . ID=NZ_JPQY01000077.1:1..868;Dbxref=taxon:615;collected-by=Mahloro H. Serepa%3B Vincent M. Gray;collection-date=2013-04-11;country=South Africa: North West Province;gbkey=Src;genome=genomic;identified-by=Mahloro H. Serepa%3B Vincent M. Gray;isolation-source=entomopathogenic nematode Oscheius sp. MCB living in soil;mol_type=genomic DNA;nat-host=Oscheius sp. MCB;strain=MCB NZ_JPQY01000077.1 RefSeq gene 1 658 . - . ID=gene-IY40_RS24510;Name=IY40_RS24510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS24510;old_locus_tag=IY40_25005;partial=true;start_range=.,1 NZ_JPQY01000077.1 Protein Homology CDS 1 658 . - 0 ID=cds-WP_043143952.1;Parent=gene-IY40_RS24510;Dbxref=GenBank:WP_043143952.1;Name=WP_043143952.1;Ontology_term=GO:0006099,GO:0008924;gbkey=CDS;go_function=L-malate dehydrogenase (quinone) activity|0008924||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004939070.1;locus_tag=IY40_RS24510;partial=true;product=malate:quinone oxidoreductase;protein_id=WP_043143952.1;start_range=.,1;transl_table=11 ##sequence-region NZ_JPQY01000078.1 1 2011 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=615 NZ_JPQY01000078.1 RefSeq region 1 2011 . + . ID=NZ_JPQY01000078.1:1..2011;Dbxref=taxon:615;collected-by=Mahloro H. Serepa%3B Vincent M. Gray;collection-date=2013-04-11;country=South Africa: North West Province;gbkey=Src;genome=genomic;identified-by=Mahloro H. Serepa%3B Vincent M. Gray;isolation-source=entomopathogenic nematode Oscheius sp. MCB living in soil;mol_type=genomic DNA;nat-host=Oscheius sp. MCB;strain=MCB NZ_JPQY01000078.1 RefSeq gene 1 301 . + . ID=gene-IY40_RS24515;Name=IY40_RS24515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS24515;partial=true;start_range=.,1 NZ_JPQY01000078.1 Protein Homology CDS 1 301 . + 1 ID=cds-WP_043143956.1;Parent=gene-IY40_RS24515;Dbxref=GenBank:WP_043143956.1;Name=WP_043143956.1;Ontology_term=GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004951660.1;locus_tag=IY40_RS24515;partial=true;product=autotransporter outer membrane beta-barrel domain-containing protein;protein_id=WP_043143956.1;start_range=.,1;transl_table=11 NZ_JPQY01000078.1 RefSeq gene 420 2011 . + . ID=gene-IY40_RS24520;Name=IY40_RS24520;end_range=2011,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS24520;old_locus_tag=IY40_25015;partial=true NZ_JPQY01000078.1 Protein Homology CDS 420 2011 . + 0 ID=cds-WP_235211395.1;Parent=gene-IY40_RS24520;Dbxref=GenBank:WP_235211395.1;Name=WP_235211395.1;Ontology_term=GO:0006508,GO:0008236;end_range=2011,.;gbkey=CDS;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015379380.1;locus_tag=IY40_RS24520;partial=true;product=S8 family serine peptidase;protein_id=WP_235211395.1;transl_table=11 ##sequence-region NZ_JPQY01000079.1 1 5101 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=615 NZ_JPQY01000079.1 RefSeq region 1 5101 . + . ID=NZ_JPQY01000079.1:1..5101;Dbxref=taxon:615;collected-by=Mahloro H. Serepa%3B Vincent M. Gray;collection-date=2013-04-11;country=South Africa: North West Province;gbkey=Src;genome=genomic;identified-by=Mahloro H. Serepa%3B Vincent M. Gray;isolation-source=entomopathogenic nematode Oscheius sp. MCB living in soil;mol_type=genomic DNA;nat-host=Oscheius sp. MCB;strain=MCB NZ_JPQY01000079.1 RefSeq gene 277 837 . + . ID=gene-IY40_RS24525;Name=IY40_RS24525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS24525;old_locus_tag=IY40_25025 NZ_JPQY01000079.1 Protein Homology CDS 277 837 . + 0 ID=cds-WP_043143962.1;Parent=gene-IY40_RS24525;Dbxref=GenBank:WP_043143962.1;Name=WP_043143962.1;Ontology_term=GO:0006310,GO:0015074,GO:0000150,GO:0003677;gbkey=CDS;go_function=DNA strand exchange activity|0000150||IEA,DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001595151.1;locus_tag=IY40_RS24525;product=recombinase family protein;protein_id=WP_043143962.1;transl_table=11 NZ_JPQY01000079.1 RefSeq gene 887 1522 . + . ID=gene-IY40_RS26580;Name=IY40_RS26580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS26580 NZ_JPQY01000079.1 Protein Homology CDS 887 1522 . + 0 ID=cds-WP_235211396.1;Parent=gene-IY40_RS26580;Dbxref=GenBank:WP_235211396.1;Name=WP_235211396.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025079.6;locus_tag=IY40_RS26580;product=DUF4158 domain-containing protein;protein_id=WP_235211396.1;transl_table=11 NZ_JPQY01000079.1 RefSeq gene 1608 2219 . + . ID=gene-IY40_RS26585;Name=IY40_RS26585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS26585 NZ_JPQY01000079.1 GeneMarkS-2+ CDS 1608 2219 . + 0 ID=cds-WP_235211397.1;Parent=gene-IY40_RS26585;Dbxref=GenBank:WP_235211397.1;Name=WP_235211397.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IY40_RS26585;product=hypothetical protein;protein_id=WP_235211397.1;transl_table=11 NZ_JPQY01000079.1 RefSeq pseudogene 2572 2877 . - . ID=gene-IY40_RS24535;Name=IY40_RS24535;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IY40_RS24535;old_locus_tag=IY40_25035;partial=true;pseudo=true;start_range=.,2572 NZ_JPQY01000079.1 Protein Homology CDS 2572 2877 . - 0 ID=cds-IY40_RS24535;Parent=gene-IY40_RS24535;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020324562.1;locus_tag=IY40_RS24535;partial=true;product=IS6 family transposase;pseudo=true;start_range=.,2572;transl_table=11 NZ_JPQY01000079.1 RefSeq gene 3231 4253 . - . ID=gene-IY40_RS24540;Name=IY40_RS24540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS24540;old_locus_tag=IY40_25040 NZ_JPQY01000079.1 Protein Homology CDS 3231 4253 . - 0 ID=cds-WP_043143963.1;Parent=gene-IY40_RS24540;Dbxref=GenBank:WP_043143963.1;Name=WP_043143963.1;Ontology_term=GO:0008171;gbkey=CDS;go_function=O-methyltransferase activity|0008171||IEA;inference=COORDINATES: protein motif:HMM:NF013087.6;locus_tag=IY40_RS24540;product=methyltransferase;protein_id=WP_043143963.1;transl_table=11 NZ_JPQY01000079.1 RefSeq gene 4321 5007 . - . ID=gene-IY40_RS24545;Name=IY40_RS24545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS24545;old_locus_tag=IY40_25045 NZ_JPQY01000079.1 Protein Homology CDS 4321 5007 . - 0 ID=cds-WP_043143965.1;Parent=gene-IY40_RS24545;Dbxref=GenBank:WP_043143965.1;Name=WP_043143965.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019455350.1;locus_tag=IY40_RS24545;product=hypothetical protein;protein_id=WP_043143965.1;transl_table=11 ##sequence-region NZ_JPQY01000080.1 1 4399 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=615 NZ_JPQY01000080.1 RefSeq region 1 4399 . + . ID=NZ_JPQY01000080.1:1..4399;Dbxref=taxon:615;collected-by=Mahloro H. Serepa%3B Vincent M. Gray;collection-date=2013-04-11;country=South Africa: North West Province;gbkey=Src;genome=genomic;identified-by=Mahloro H. Serepa%3B Vincent M. Gray;isolation-source=entomopathogenic nematode Oscheius sp. MCB living in soil;mol_type=genomic DNA;nat-host=Oscheius sp. MCB;strain=MCB NZ_JPQY01000080.1 RefSeq pseudogene 165 377 . + . ID=gene-IY40_RS26165;Name=IY40_RS26165;end_range=377,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IY40_RS26165;partial=true;pseudo=true;start_range=.,165 NZ_JPQY01000080.1 Protein Homology CDS 165 377 . + 0 ID=cds-IY40_RS26165;Parent=gene-IY40_RS26165;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=377,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012650068.1;locus_tag=IY40_RS26165;partial=true;product=transposase;pseudo=true;start_range=.,165;transl_table=11 NZ_JPQY01000080.1 RefSeq gene 449 751 . - . ID=gene-IY40_RS26170;Name=IY40_RS26170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS26170 NZ_JPQY01000080.1 Protein Homology CDS 449 751 . - 0 ID=cds-WP_161781793.1;Parent=gene-IY40_RS26170;Dbxref=GenBank:WP_161781793.1;Name=WP_161781793.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019984.6;locus_tag=IY40_RS26170;product=group II intron maturase-specific domain-containing protein;protein_id=WP_161781793.1;transl_table=11 NZ_JPQY01000080.1 RefSeq pseudogene 748 1818 . - . ID=gene-IY40_RS24550;Name=ltrA;gbkey=Gene;gene=ltrA;gene_biotype=pseudogene;locus_tag=IY40_RS24550;old_locus_tag=IY40_25055;pseudo=true NZ_JPQY01000080.1 Protein Homology CDS 748 1818 . - 0 ID=cds-IY40_RS24550;Parent=gene-IY40_RS24550;Note=internal stop;Ontology_term=GO:0000373,GO:0003964;gbkey=CDS;gene=ltrA;go_function=RNA-directed DNA polymerase activity|0003964||IEA;go_process=Group II intron splicing|0000373||IEA;inference=COORDINATES: protein motif:HMM:NF012307.6;locus_tag=IY40_RS24550;product=group II intron reverse transcriptase/maturase;pseudo=true;transl_table=11 NZ_JPQY01000080.1 RefSeq gene 2419 3366 . - . ID=gene-IY40_RS25665;Name=IY40_RS25665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS25665;old_locus_tag=IY40_25060 NZ_JPQY01000080.1 Protein Homology CDS 2419 3366 . - 0 ID=cds-WP_072008292.1;Parent=gene-IY40_RS25665;Dbxref=GenBank:WP_072008292.1;Name=WP_072008292.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004150717.1;locus_tag=IY40_RS25665;product=DMT family transporter;protein_id=WP_072008292.1;transl_table=11 NZ_JPQY01000080.1 RefSeq gene 3483 3944 . + . ID=gene-IY40_RS24555;Name=IY40_RS24555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS24555;old_locus_tag=IY40_25065 NZ_JPQY01000080.1 Protein Homology CDS 3483 3944 . + 0 ID=cds-WP_043143969.1;Parent=gene-IY40_RS24555;Dbxref=GenBank:WP_043143969.1;Name=WP_043143969.1;Ontology_term=GO:0043565;gbkey=CDS;go_function=sequence-specific DNA binding|0043565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000884672.1;locus_tag=IY40_RS24555;product=Lrp/AsnC family transcriptional regulator;protein_id=WP_043143969.1;transl_table=11 NZ_JPQY01000080.1 RefSeq pseudogene 4266 4399 . - . ID=gene-IY40_RS25670;Name=IY40_RS25670;end_range=4399,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IY40_RS25670;partial=true;pseudo=true NZ_JPQY01000080.1 Protein Homology CDS 4266 4399 . - 2 ID=cds-IY40_RS25670;Parent=gene-IY40_RS25670;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=4399,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_047389784.1;locus_tag=IY40_RS25670;partial=true;product=IS6 family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_JPQY01000081.1 1 2230 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=615 NZ_JPQY01000081.1 RefSeq region 1 2230 . + . ID=NZ_JPQY01000081.1:1..2230;Dbxref=taxon:615;collected-by=Mahloro H. Serepa%3B Vincent M. Gray;collection-date=2013-04-11;country=South Africa: North West Province;gbkey=Src;genome=genomic;identified-by=Mahloro H. Serepa%3B Vincent M. Gray;isolation-source=entomopathogenic nematode Oscheius sp. MCB living in soil;mol_type=genomic DNA;nat-host=Oscheius sp. MCB;strain=MCB NZ_JPQY01000081.1 RefSeq gene 1 794 . - . ID=gene-IY40_RS25840;Name=IY40_RS25840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS25840;old_locus_tag=IY40_25070;partial=true;start_range=.,1 NZ_JPQY01000081.1 Protein Homology CDS 1 794 . - 0 ID=cds-WP_043143979.1;Parent=gene-IY40_RS25840;Dbxref=GenBank:WP_043143979.1;Name=WP_043143979.1;Ontology_term=GO:0009101,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=glycoprotein biosynthetic process|0009101||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006324411.1;locus_tag=IY40_RS25840;partial=true;product=glycosyltransferase family 4 protein;protein_id=WP_043143979.1;start_range=.,1;transl_table=11 NZ_JPQY01000081.1 RefSeq gene 850 1968 . - . ID=gene-IY40_RS24565;Name=IY40_RS24565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS24565;old_locus_tag=IY40_25075 NZ_JPQY01000081.1 Protein Homology CDS 850 1968 . - 0 ID=cds-WP_235211398.1;Parent=gene-IY40_RS24565;Dbxref=GenBank:WP_235211398.1;Name=WP_235211398.1;Ontology_term=GO:0009101,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=glycoprotein biosynthetic process|0009101||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004942398.1;locus_tag=IY40_RS24565;product=glycosyltransferase;protein_id=WP_235211398.1;transl_table=11 NZ_JPQY01000081.1 RefSeq pseudogene 2012 2230 . - . ID=gene-IY40_RS26590;Name=IY40_RS26590;end_range=2230,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IY40_RS26590;old_locus_tag=IY40_25080;partial=true;pseudo=true NZ_JPQY01000081.1 Protein Homology CDS 2012 2230 . - 0 ID=cds-IY40_RS26590;Parent=gene-IY40_RS26590;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=2230,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016928427.1;locus_tag=IY40_RS26590;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region NZ_JPQY01000082.1 1 1541 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=615 NZ_JPQY01000082.1 RefSeq region 1 1541 . + . ID=NZ_JPQY01000082.1:1..1541;Dbxref=taxon:615;collected-by=Mahloro H. Serepa%3B Vincent M. Gray;collection-date=2013-04-11;country=South Africa: North West Province;gbkey=Src;genome=genomic;identified-by=Mahloro H. Serepa%3B Vincent M. Gray;isolation-source=entomopathogenic nematode Oscheius sp. MCB living in soil;mol_type=genomic DNA;nat-host=Oscheius sp. MCB;strain=MCB NZ_JPQY01000082.1 RefSeq gene 216 1415 . - . ID=gene-IY40_RS24575;Name=IY40_RS24575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS24575;old_locus_tag=IY40_25090 NZ_JPQY01000082.1 Protein Homology CDS 216 1415 . - 0 ID=cds-WP_004940721.1;Parent=gene-IY40_RS24575;Dbxref=GenBank:WP_004940721.1;Name=WP_004940721.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004940721.1;locus_tag=IY40_RS24575;product=multidrug efflux MFS transporter;protein_id=WP_004940721.1;transl_table=11 ##sequence-region NZ_JPQY01000083.1 1 674 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=615 NZ_JPQY01000083.1 RefSeq region 1 674 . + . ID=NZ_JPQY01000083.1:1..674;Dbxref=taxon:615;collected-by=Mahloro H. Serepa%3B Vincent M. Gray;collection-date=2013-04-11;country=South Africa: North West Province;gbkey=Src;genome=genomic;identified-by=Mahloro H. Serepa%3B Vincent M. Gray;isolation-source=entomopathogenic nematode Oscheius sp. MCB living in soil;mol_type=genomic DNA;nat-host=Oscheius sp. MCB;strain=MCB NZ_JPQY01000083.1 RefSeq gene 1 674 . + . ID=gene-IY40_RS24580;Name=IY40_RS24580;end_range=674,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS24580;old_locus_tag=IY40_25095;partial=true;start_range=.,1 NZ_JPQY01000083.1 Protein Homology CDS 1 674 . + 0 ID=cds-WP_043143986.1;Parent=gene-IY40_RS24580;Dbxref=GenBank:WP_043143986.1;Name=WP_043143986.1;Ontology_term=GO:0055085,GO:0022857;end_range=674,.;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004947224.1;locus_tag=IY40_RS24580;partial=true;product=MFS transporter;protein_id=WP_043143986.1;start_range=.,1;transl_table=11 ##sequence-region NZ_JPQY01000084.1 1 13120 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=615 NZ_JPQY01000084.1 RefSeq region 1 13120 . + . ID=NZ_JPQY01000084.1:1..13120;Dbxref=taxon:615;collected-by=Mahloro H. Serepa%3B Vincent M. Gray;collection-date=2013-04-11;country=South Africa: North West Province;gbkey=Src;genome=genomic;identified-by=Mahloro H. Serepa%3B Vincent M. Gray;isolation-source=entomopathogenic nematode Oscheius sp. MCB living in soil;mol_type=genomic DNA;nat-host=Oscheius sp. MCB;strain=MCB NZ_JPQY01000084.1 RefSeq pseudogene 1 614 . + . ID=gene-IY40_RS26295;Name=IY40_RS26295;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IY40_RS26295;old_locus_tag=IY40_25100;partial=true;pseudo=true;start_range=.,1 NZ_JPQY01000084.1 GeneMarkS-2+ CDS 1 614 . + 2 ID=cds-IY40_RS26295;Parent=gene-IY40_RS26295;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IY40_RS26295;partial=true;product=YrIlm family inverse autotransporter adhesin;pseudo=true;start_range=.,1;transl_table=11 NZ_JPQY01000084.1 RefSeq gene 696 1040 . + . ID=gene-IY40_RS24590;Name=IY40_RS24590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS24590;old_locus_tag=IY40_25105 NZ_JPQY01000084.1 GeneMarkS-2+ CDS 696 1040 . + 0 ID=cds-WP_043143995.1;Parent=gene-IY40_RS24590;Dbxref=GenBank:WP_043143995.1;Name=WP_043143995.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IY40_RS24590;product=hypothetical protein;protein_id=WP_043143995.1;transl_table=11 NZ_JPQY01000084.1 RefSeq gene 1296 3023 . + . ID=gene-IY40_RS24595;Name=IY40_RS24595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS24595;old_locus_tag=IY40_25110 NZ_JPQY01000084.1 GeneMarkS-2+ CDS 1296 3023 . + 0 ID=cds-WP_043143999.1;Parent=gene-IY40_RS24595;Dbxref=GenBank:WP_043143999.1;Name=WP_043143999.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IY40_RS24595;product=hypothetical protein;protein_id=WP_043143999.1;transl_table=11 NZ_JPQY01000084.1 RefSeq gene 3555 4901 . + . ID=gene-IY40_RS26175;Name=IY40_RS26175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS26175 NZ_JPQY01000084.1 GeneMarkS-2+ CDS 3555 4901 . + 0 ID=cds-WP_152561324.1;Parent=gene-IY40_RS26175;Dbxref=GenBank:WP_152561324.1;Name=WP_152561324.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IY40_RS26175;product=hypothetical protein;protein_id=WP_152561324.1;transl_table=11 NZ_JPQY01000084.1 RefSeq gene 5291 5575 . + . ID=gene-IY40_RS24600;Name=IY40_RS24600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS24600;old_locus_tag=IY40_25115 NZ_JPQY01000084.1 GeneMarkS-2+ CDS 5291 5575 . + 0 ID=cds-WP_043144001.1;Parent=gene-IY40_RS24600;Dbxref=GenBank:WP_043144001.1;Name=WP_043144001.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IY40_RS24600;product=hypothetical protein;protein_id=WP_043144001.1;transl_table=11 NZ_JPQY01000084.1 RefSeq gene 6736 8325 . + . ID=gene-IY40_RS24605;Name=IY40_RS24605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS24605 NZ_JPQY01000084.1 Protein Homology CDS 6736 8325 . + 0 ID=cds-WP_080287166.1;Parent=gene-IY40_RS24605;Dbxref=GenBank:WP_080287166.1;Name=WP_080287166.1;Ontology_term=GO:0009101,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=glycoprotein biosynthetic process|0009101||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001520091.1;locus_tag=IY40_RS24605;product=glycosyltransferase family 39 protein;protein_id=WP_080287166.1;transl_table=11 NZ_JPQY01000084.1 RefSeq gene 8350 9846 . + . ID=gene-IY40_RS24610;Name=IY40_RS24610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS24610;old_locus_tag=IY40_25125 NZ_JPQY01000084.1 Protein Homology CDS 8350 9846 . + 0 ID=cds-WP_072008294.1;Parent=gene-IY40_RS24610;Dbxref=GenBank:WP_072008294.1;Name=WP_072008294.1;Ontology_term=GO:0016810;gbkey=CDS;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013359238.1;locus_tag=IY40_RS24610;product=8-oxoguanine deaminase;protein_id=WP_072008294.1;transl_table=11 NZ_JPQY01000084.1 RefSeq gene 10235 12397 . + . ID=gene-IY40_RS24615;Name=IY40_RS24615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS24615;old_locus_tag=IY40_25130 NZ_JPQY01000084.1 GeneMarkS-2+ CDS 10235 12397 . + 0 ID=cds-WP_043144004.1;Parent=gene-IY40_RS24615;Dbxref=GenBank:WP_043144004.1;Name=WP_043144004.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IY40_RS24615;product=bactofilin family protein;protein_id=WP_043144004.1;transl_table=11 NZ_JPQY01000084.1 RefSeq gene 12474 13120 . + . ID=gene-IY40_RS24620;Name=IY40_RS24620;end_range=13120,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS24620;old_locus_tag=IY40_25135;partial=true NZ_JPQY01000084.1 GeneMarkS-2+ CDS 12474 13120 . + 0 ID=cds-WP_043144008.1;Parent=gene-IY40_RS24620;Dbxref=GenBank:WP_043144008.1;Name=WP_043144008.1;end_range=13120,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IY40_RS24620;partial=true;product=hypothetical protein;protein_id=WP_043144008.1;transl_table=11 ##sequence-region NZ_JPQY01000085.1 1 809 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=615 NZ_JPQY01000085.1 RefSeq region 1 809 . + . ID=NZ_JPQY01000085.1:1..809;Dbxref=taxon:615;collected-by=Mahloro H. Serepa%3B Vincent M. Gray;collection-date=2013-04-11;country=South Africa: North West Province;gbkey=Src;genome=genomic;identified-by=Mahloro H. Serepa%3B Vincent M. Gray;isolation-source=entomopathogenic nematode Oscheius sp. MCB living in soil;mol_type=genomic DNA;nat-host=Oscheius sp. MCB;strain=MCB NZ_JPQY01000085.1 RefSeq gene 507 809 . + . ID=gene-IY40_RS26595;Name=IY40_RS26595;end_range=809,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS26595;partial=true NZ_JPQY01000085.1 Protein Homology CDS 507 809 . + 0 ID=cds-WP_235211399.1;Parent=gene-IY40_RS26595;Dbxref=GenBank:WP_235211399.1;Name=WP_235211399.1;end_range=809,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013060284.1;locus_tag=IY40_RS26595;partial=true;product=hypothetical protein;protein_id=WP_235211399.1;transl_table=11 ##sequence-region NZ_JPQY01000086.1 1 2991 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=615 NZ_JPQY01000086.1 RefSeq region 1 2991 . + . ID=NZ_JPQY01000086.1:1..2991;Dbxref=taxon:615;collected-by=Mahloro H. Serepa%3B Vincent M. Gray;collection-date=2013-04-11;country=South Africa: North West Province;gbkey=Src;genome=genomic;identified-by=Mahloro H. Serepa%3B Vincent M. Gray;isolation-source=entomopathogenic nematode Oscheius sp. MCB living in soil;mol_type=genomic DNA;nat-host=Oscheius sp. MCB;strain=MCB NZ_JPQY01000086.1 RefSeq gene 1 1282 . - . ID=gene-IY40_RS24625;Name=IY40_RS24625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS24625;old_locus_tag=IY40_25145;partial=true;start_range=.,1 NZ_JPQY01000086.1 Protein Homology CDS 1 1282 . - 0 ID=cds-WP_050505207.1;Parent=gene-IY40_RS24625;Dbxref=GenBank:WP_050505207.1;Name=WP_050505207.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF047389.1;locus_tag=IY40_RS24625;partial=true;product=P-loop ATPase%2C Sll1717 family;protein_id=WP_050505207.1;start_range=.,1;transl_table=11 NZ_JPQY01000086.1 RefSeq gene 2071 2475 . - . ID=gene-IY40_RS24630;Name=IY40_RS24630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS24630;old_locus_tag=IY40_25150 NZ_JPQY01000086.1 Protein Homology CDS 2071 2475 . - 0 ID=cds-WP_043144020.1;Parent=gene-IY40_RS24630;Dbxref=GenBank:WP_043144020.1;Name=WP_043144020.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012146867.1;locus_tag=IY40_RS24630;product=hypothetical protein;protein_id=WP_043144020.1;transl_table=11 NZ_JPQY01000086.1 RefSeq pseudogene 2472 2991 . - . ID=gene-IY40_RS24635;Name=IY40_RS24635;end_range=2991,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IY40_RS24635;old_locus_tag=IY40_25155;partial=true;pseudo=true NZ_JPQY01000086.1 Protein Homology CDS 2472 2991 . - 1 ID=cds-IY40_RS24635;Parent=gene-IY40_RS24635;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=2991,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016191725.1;locus_tag=IY40_RS24635;partial=true;product=conjugative transfer ATPase;pseudo=true;transl_table=11 ##sequence-region NZ_JPQY01000087.1 1 1140 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=615 NZ_JPQY01000087.1 RefSeq region 1 1140 . + . ID=NZ_JPQY01000087.1:1..1140;Dbxref=taxon:615;collected-by=Mahloro H. Serepa%3B Vincent M. Gray;collection-date=2013-04-11;country=South Africa: North West Province;gbkey=Src;genome=genomic;identified-by=Mahloro H. Serepa%3B Vincent M. Gray;isolation-source=entomopathogenic nematode Oscheius sp. MCB living in soil;mol_type=genomic DNA;nat-host=Oscheius sp. MCB;strain=MCB NZ_JPQY01000087.1 RefSeq gene 345 740 . - . ID=gene-IY40_RS24640;Name=IY40_RS24640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS24640;old_locus_tag=IY40_25160 NZ_JPQY01000087.1 GeneMarkS-2+ CDS 345 740 . - 0 ID=cds-WP_043144027.1;Parent=gene-IY40_RS24640;Dbxref=GenBank:WP_043144027.1;Name=WP_043144027.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IY40_RS24640;product=hypothetical protein;protein_id=WP_043144027.1;transl_table=11 NZ_JPQY01000087.1 RefSeq gene 752 1140 . - . ID=gene-IY40_RS25685;Name=IY40_RS25685;end_range=1140,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS25685;partial=true NZ_JPQY01000087.1 Protein Homology CDS 752 1140 . - 2 ID=cds-WP_265182941.1;Parent=gene-IY40_RS25685;Dbxref=GenBank:WP_265182941.1;Name=WP_265182941.1;end_range=1140,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013024966.1;locus_tag=IY40_RS25685;partial=true;product=HNH/endonuclease VII fold putative polymorphic toxin;protein_id=WP_265182941.1;transl_table=11 ##sequence-region NZ_JPQY01000088.1 1 4037 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=615 NZ_JPQY01000088.1 RefSeq region 1 4037 . + . ID=NZ_JPQY01000088.1:1..4037;Dbxref=taxon:615;collected-by=Mahloro H. Serepa%3B Vincent M. Gray;collection-date=2013-04-11;country=South Africa: North West Province;gbkey=Src;genome=genomic;identified-by=Mahloro H. Serepa%3B Vincent M. Gray;isolation-source=entomopathogenic nematode Oscheius sp. MCB living in soil;mol_type=genomic DNA;nat-host=Oscheius sp. MCB;strain=MCB NZ_JPQY01000088.1 RefSeq gene 1 1293 . + . ID=gene-IY40_RS24645;Name=dnaB-PI;gbkey=Gene;gene=dnaB-PI;gene_biotype=protein_coding;locus_tag=IY40_RS24645;partial=true;start_range=.,1 NZ_JPQY01000088.1 Protein Homology CDS 1 1293 . + 0 ID=cds-WP_043144032.1;Parent=gene-IY40_RS24645;Dbxref=GenBank:WP_043144032.1;Name=WP_043144032.1;gbkey=CDS;gene=dnaB-PI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013811151.1;locus_tag=IY40_RS24645;partial=true;product=SPI-7-type island replicative DNA helicase;protein_id=WP_043144032.1;start_range=.,1;transl_table=11 NZ_JPQY01000088.1 RefSeq pseudogene 1296 2744 . + . ID=gene-IY40_RS24650;Name=IY40_RS24650;end_range=2744,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IY40_RS24650;partial=true;pseudo=true NZ_JPQY01000088.1 Protein Homology CDS 1296 2744 . + 0 ID=cds-IY40_RS24650;Parent=gene-IY40_RS24650;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=2744,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013811152.1;locus_tag=IY40_RS24650;partial=true;product=ParB family protein;pseudo=true;transl_table=11 NZ_JPQY01000088.1 RefSeq pseudogene 2749 3333 . + . ID=gene-IY40_RS24655;Name=IY40_RS24655;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IY40_RS24655;partial=true;pseudo=true;start_range=.,2749 NZ_JPQY01000088.1 Protein Homology CDS 2749 3333 . + 0 ID=cds-IY40_RS24655;Parent=gene-IY40_RS24655;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015869768.1;locus_tag=IY40_RS24655;partial=true;product=DUF7168 domain-containing protein;pseudo=true;start_range=.,2749;transl_table=11 NZ_JPQY01000088.1 RefSeq gene 3544 4037 . + . ID=gene-IY40_RS24665;Name=IY40_RS24665;end_range=4037,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS24665;old_locus_tag=IY40_25185;partial=true NZ_JPQY01000088.1 Protein Homology CDS 3544 4037 . + 0 ID=cds-WP_043144041.1;Parent=gene-IY40_RS24665;Dbxref=GenBank:WP_043144041.1;Name=WP_043144041.1;end_range=4037,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012004772.1;locus_tag=IY40_RS24665;partial=true;product=DUF2857 domain-containing protein;protein_id=WP_043144041.1;transl_table=11 ##sequence-region NZ_JPQY01000089.1 1 1176 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=615 NZ_JPQY01000089.1 RefSeq region 1 1176 . + . ID=NZ_JPQY01000089.1:1..1176;Dbxref=taxon:615;collected-by=Mahloro H. Serepa%3B Vincent M. Gray;collection-date=2013-04-11;country=South Africa: North West Province;gbkey=Src;genome=genomic;identified-by=Mahloro H. Serepa%3B Vincent M. Gray;isolation-source=entomopathogenic nematode Oscheius sp. MCB living in soil;mol_type=genomic DNA;nat-host=Oscheius sp. MCB;strain=MCB NZ_JPQY01000089.1 RefSeq gene 302 1021 . + . ID=gene-IY40_RS25690;Name=IY40_RS25690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS25690 NZ_JPQY01000089.1 Protein Homology CDS 302 1021 . + 0 ID=cds-WP_152561325.1;Parent=gene-IY40_RS25690;Dbxref=GenBank:WP_152561325.1;Name=WP_152561325.1;Ontology_term=GO:0009058,GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: protein motif:HMM:NF012382.6;locus_tag=IY40_RS25690;product=aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme;protein_id=WP_152561325.1;transl_table=11 ##sequence-region NZ_JPQY01000090.1 1 954 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=615 NZ_JPQY01000090.1 RefSeq region 1 954 . + . ID=NZ_JPQY01000090.1:1..954;Dbxref=taxon:615;collected-by=Mahloro H. Serepa%3B Vincent M. Gray;collection-date=2013-04-11;country=South Africa: North West Province;gbkey=Src;genome=genomic;identified-by=Mahloro H. Serepa%3B Vincent M. Gray;isolation-source=entomopathogenic nematode Oscheius sp. MCB living in soil;mol_type=genomic DNA;nat-host=Oscheius sp. MCB;strain=MCB NZ_JPQY01000090.1 RefSeq gene 62 954 . + . ID=gene-IY40_RS24670;Name=IY40_RS24670;end_range=954,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS24670;old_locus_tag=IY40_25190;partial=true NZ_JPQY01000090.1 Protein Homology CDS 62 954 . + 0 ID=cds-WP_235211401.1;Parent=gene-IY40_RS24670;Dbxref=GenBank:WP_235211401.1;Name=WP_235211401.1;end_range=954,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020698.6;locus_tag=IY40_RS24670;partial=true;product=Ig-like domain-containing protein;protein_id=WP_235211401.1;transl_table=11 ##sequence-region NZ_JPQY01000091.1 1 5568 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=615 NZ_JPQY01000091.1 RefSeq region 1 5568 . + . ID=NZ_JPQY01000091.1:1..5568;Dbxref=taxon:615;collected-by=Mahloro H. Serepa%3B Vincent M. Gray;collection-date=2013-04-11;country=South Africa: North West Province;gbkey=Src;genome=genomic;identified-by=Mahloro H. Serepa%3B Vincent M. Gray;isolation-source=entomopathogenic nematode Oscheius sp. MCB living in soil;mol_type=genomic DNA;nat-host=Oscheius sp. MCB;strain=MCB NZ_JPQY01000091.1 RefSeq gene 763 1551 . + . ID=gene-IY40_RS24675;Name=IY40_RS24675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS24675;old_locus_tag=IY40_25195 NZ_JPQY01000091.1 Protein Homology CDS 763 1551 . + 0 ID=cds-WP_043144053.1;Parent=gene-IY40_RS24675;Dbxref=GenBank:WP_043144053.1;Name=WP_043144053.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF013245.6;locus_tag=IY40_RS24675;product=ABC transporter permease;protein_id=WP_043144053.1;transl_table=11 NZ_JPQY01000091.1 RefSeq gene 1541 2821 . + . ID=gene-IY40_RS24915;Name=IY40_RS24915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS24915 NZ_JPQY01000091.1 Protein Homology CDS 1541 2821 . + 0 ID=cds-WP_050505209.1;Parent=gene-IY40_RS24915;Dbxref=GenBank:WP_050505209.1;Name=WP_050505209.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: protein motif:HMM:NF025877.6;locus_tag=IY40_RS24915;product=ABC transporter ATP-binding protein;protein_id=WP_050505209.1;transl_table=11 NZ_JPQY01000091.1 RefSeq gene 2811 4025 . + . ID=gene-IY40_RS24685;Name=IY40_RS24685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS24685;old_locus_tag=IY40_25205 NZ_JPQY01000091.1 Protein Homology CDS 2811 4025 . + 0 ID=cds-WP_043144055.1;Parent=gene-IY40_RS24685;Dbxref=GenBank:WP_043144055.1;Name=WP_043144055.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024880.6;locus_tag=IY40_RS24685;product=methyltransferase domain-containing protein;protein_id=WP_043144055.1;transl_table=11 NZ_JPQY01000091.1 RefSeq gene 4022 5053 . + . ID=gene-IY40_RS24690;Name=IY40_RS24690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS24690;old_locus_tag=IY40_25210 NZ_JPQY01000091.1 Protein Homology CDS 4022 5053 . + 0 ID=cds-WP_043144058.1;Parent=gene-IY40_RS24690;Dbxref=GenBank:WP_043144058.1;Name=WP_043144058.1;Ontology_term=GO:0009101,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=glycoprotein biosynthetic process|0009101||IEA;inference=COORDINATES: protein motif:HMM:NF025082.6;locus_tag=IY40_RS24690;product=glycosyltransferase family 2 protein;protein_id=WP_043144058.1;transl_table=11 NZ_JPQY01000091.1 RefSeq gene 5046 5555 . + . ID=gene-IY40_RS26180;Name=IY40_RS26180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS26180 NZ_JPQY01000091.1 GeneMarkS-2+ CDS 5046 5555 . + 0 ID=cds-WP_152561326.1;Parent=gene-IY40_RS26180;Dbxref=GenBank:WP_152561326.1;Name=WP_152561326.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IY40_RS26180;product=hypothetical protein;protein_id=WP_152561326.1;transl_table=11 ##sequence-region NZ_JPQY01000092.1 1 1448 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=615 NZ_JPQY01000092.1 RefSeq region 1 1448 . + . ID=NZ_JPQY01000092.1:1..1448;Dbxref=taxon:615;collected-by=Mahloro H. Serepa%3B Vincent M. Gray;collection-date=2013-04-11;country=South Africa: North West Province;gbkey=Src;genome=genomic;identified-by=Mahloro H. Serepa%3B Vincent M. Gray;isolation-source=entomopathogenic nematode Oscheius sp. MCB living in soil;mol_type=genomic DNA;nat-host=Oscheius sp. MCB;strain=MCB NZ_JPQY01000092.1 RefSeq gene 1 1445 . - . ID=gene-IY40_RS24695;Name=IY40_RS24695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS24695;old_locus_tag=IY40_25215;partial=true;start_range=.,1 NZ_JPQY01000092.1 Protein Homology CDS 1 1445 . - 0 ID=cds-WP_321029156.1;Parent=gene-IY40_RS24695;Dbxref=GenBank:WP_321029156.1;Name=WP_321029156.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF023351.6;locus_tag=IY40_RS24695;partial=true;product=inverse autotransporter beta domain-containing protein;protein_id=WP_321029156.1;start_range=.,1;transl_table=11 ##sequence-region NZ_JPQY01000093.1 1 4139 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=615 NZ_JPQY01000093.1 RefSeq region 1 4139 . + . ID=NZ_JPQY01000093.1:1..4139;Dbxref=taxon:615;collected-by=Mahloro H. Serepa%3B Vincent M. Gray;collection-date=2013-04-11;country=South Africa: North West Province;gbkey=Src;genome=genomic;identified-by=Mahloro H. Serepa%3B Vincent M. Gray;isolation-source=entomopathogenic nematode Oscheius sp. MCB living in soil;mol_type=genomic DNA;nat-host=Oscheius sp. MCB;strain=MCB NZ_JPQY01000093.1 RefSeq gene 282 593 . - . ID=gene-IY40_RS24700;Name=IY40_RS24700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS24700;old_locus_tag=IY40_25225 NZ_JPQY01000093.1 Protein Homology CDS 282 593 . - 0 ID=cds-WP_043144071.1;Parent=gene-IY40_RS24700;Dbxref=GenBank:WP_043144071.1;Name=WP_043144071.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004938271.1;locus_tag=IY40_RS24700;product=hypothetical protein;protein_id=WP_043144071.1;transl_table=11 NZ_JPQY01000093.1 RefSeq gene 900 1754 . - . ID=gene-IY40_RS24705;Name=IY40_RS24705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS24705;old_locus_tag=IY40_25230 NZ_JPQY01000093.1 Protein Homology CDS 900 1754 . - 0 ID=cds-WP_025302961.1;Parent=gene-IY40_RS24705;Dbxref=GenBank:WP_025302961.1;Name=WP_025302961.1;Ontology_term=GO:0005975,GO:0008270,GO:0009025;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,tagatose-bisphosphate aldolase activity|0009025||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017892969.1;locus_tag=IY40_RS24705;product=tagatose bisphosphate family class II aldolase;protein_id=WP_025302961.1;transl_table=11 NZ_JPQY01000093.1 RefSeq gene 1764 2930 . - . ID=gene-IY40_RS24710;Name=IY40_RS24710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS24710;old_locus_tag=IY40_25235 NZ_JPQY01000093.1 Protein Homology CDS 1764 2930 . - 0 ID=cds-WP_043144075.1;Parent=gene-IY40_RS24710;Dbxref=GenBank:WP_043144075.1;Name=WP_043144075.1;Ontology_term=GO:1901135,GO:0097367;gbkey=CDS;go_function=carbohydrate derivative binding|0097367||IEA;go_process=carbohydrate derivative metabolic process|1901135||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016927595.1;locus_tag=IY40_RS24710;product=SIS domain-containing protein;protein_id=WP_043144075.1;transl_table=11 NZ_JPQY01000093.1 RefSeq gene 2957 3727 . - . ID=gene-IY40_RS24715;Name=agaR;gbkey=Gene;gene=agaR;gene_biotype=protein_coding;locus_tag=IY40_RS24715;old_locus_tag=IY40_25240 NZ_JPQY01000093.1 Protein Homology CDS 2957 3727 . - 0 ID=cds-WP_025302959.1;Parent=gene-IY40_RS24715;Dbxref=GenBank:WP_025302959.1;Name=WP_025302959.1;gbkey=CDS;gene=agaR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004938263.1;locus_tag=IY40_RS24715;product=transcriptional repressor AgaR;protein_id=WP_025302959.1;transl_table=11 ##sequence-region NZ_JPQY01000094.1 1 2952 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=615 NZ_JPQY01000094.1 RefSeq region 1 2952 . + . ID=NZ_JPQY01000094.1:1..2952;Dbxref=taxon:615;collected-by=Mahloro H. Serepa%3B Vincent M. Gray;collection-date=2013-04-11;country=South Africa: North West Province;gbkey=Src;genome=genomic;identified-by=Mahloro H. Serepa%3B Vincent M. Gray;isolation-source=entomopathogenic nematode Oscheius sp. MCB living in soil;mol_type=genomic DNA;nat-host=Oscheius sp. MCB;strain=MCB NZ_JPQY01000094.1 RefSeq gene 59 859 . - . ID=gene-IY40_RS24720;Name=IY40_RS24720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS24720;old_locus_tag=IY40_25250 NZ_JPQY01000094.1 Protein Homology CDS 59 859 . - 0 ID=cds-WP_049294839.1-2;Parent=gene-IY40_RS24720;Dbxref=GenBank:WP_049294839.1;Name=WP_049294839.1;Ontology_term=GO:0016491,GO:0070403;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015376694.1;locus_tag=IY40_RS24720;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_049294839.1;transl_table=11 NZ_JPQY01000094.1 RefSeq gene 966 1859 . + . ID=gene-IY40_RS24725;Name=IY40_RS24725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS24725;old_locus_tag=IY40_25255 NZ_JPQY01000094.1 Protein Homology CDS 966 1859 . + 0 ID=cds-WP_043135815.1-2;Parent=gene-IY40_RS24725;Dbxref=GenBank:WP_043135815.1;Name=WP_043135815.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004932564.1;locus_tag=IY40_RS24725;product=LysR family transcriptional regulator;protein_id=WP_043135815.1;transl_table=11 NZ_JPQY01000094.1 RefSeq gene 2280 2597 . + . ID=gene-IY40_RS24730;Name=IY40_RS24730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS24730;old_locus_tag=IY40_25260 NZ_JPQY01000094.1 Protein Homology CDS 2280 2597 . + 0 ID=cds-WP_004932561.1-2;Parent=gene-IY40_RS24730;Dbxref=GenBank:WP_004932561.1;Name=WP_004932561.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212240.1;locus_tag=IY40_RS24730;product=PTS sugar transporter subunit IIB;protein_id=WP_004932561.1;transl_table=11 NZ_JPQY01000094.1 RefSeq pseudogene 2610 2952 . + . ID=gene-IY40_RS24735;Name=IY40_RS24735;end_range=2952,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IY40_RS24735;old_locus_tag=IY40_25265;partial=true;pseudo=true NZ_JPQY01000094.1 Protein Homology CDS 2610 2952 . + 0 ID=cds-IY40_RS24735;Parent=gene-IY40_RS24735;Note=catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B involved in N%2CN'-diacetylchitobiose transport%3B protein IIA transfers a phosphoryl group to IIB which then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel for the sugar uptake%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=2952,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017384664.1;locus_tag=IY40_RS24735;partial=true;product=PTS N%2CN'-diacetylchitobiose transporter subunit IIC;pseudo=true;transl_table=11 ##sequence-region NZ_JPQY01000095.1 1 1347 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=615 NZ_JPQY01000095.1 RefSeq region 1 1347 . + . ID=NZ_JPQY01000095.1:1..1347;Dbxref=taxon:615;collected-by=Mahloro H. Serepa%3B Vincent M. Gray;collection-date=2013-04-11;country=South Africa: North West Province;gbkey=Src;genome=genomic;identified-by=Mahloro H. Serepa%3B Vincent M. Gray;isolation-source=entomopathogenic nematode Oscheius sp. MCB living in soil;mol_type=genomic DNA;nat-host=Oscheius sp. MCB;strain=MCB NZ_JPQY01000095.1 RefSeq gene 1 718 . - . ID=gene-IY40_RS24740;Name=IY40_RS24740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS24740;old_locus_tag=IY40_25270;partial=true;start_range=.,1 NZ_JPQY01000095.1 Protein Homology CDS 1 718 . - 0 ID=cds-WP_043144089.1;Parent=gene-IY40_RS24740;Dbxref=GenBank:WP_043144089.1;Name=WP_043144089.1;Ontology_term=GO:0071705,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=nitrogen compound transport|0071705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015378949.1;locus_tag=IY40_RS24740;partial=true;product=BCCT family transporter;protein_id=WP_043144089.1;start_range=.,1;transl_table=11 NZ_JPQY01000095.1 RefSeq gene 877 1347 . + . ID=gene-IY40_RS24745;Name=betI;end_range=1347,.;gbkey=Gene;gene=betI;gene_biotype=protein_coding;locus_tag=IY40_RS24745;old_locus_tag=IY40_25275;partial=true NZ_JPQY01000095.1 Protein Homology CDS 877 1347 . + 0 ID=cds-WP_043144086.1;Parent=gene-IY40_RS24745;Dbxref=GenBank:WP_043144086.1;Name=WP_043144086.1;Ontology_term=GO:0003677;end_range=1347,.;gbkey=CDS;gene=betI;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004952341.1;locus_tag=IY40_RS24745;partial=true;product=transcriptional regulator BetI;protein_id=WP_043144086.1;transl_table=11 ##sequence-region NZ_JPQY01000096.1 1 4517 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=615 NZ_JPQY01000096.1 RefSeq region 1 4517 . + . ID=NZ_JPQY01000096.1:1..4517;Dbxref=taxon:615;collected-by=Mahloro H. Serepa%3B Vincent M. Gray;collection-date=2013-04-11;country=South Africa: North West Province;gbkey=Src;genome=genomic;identified-by=Mahloro H. Serepa%3B Vincent M. Gray;isolation-source=entomopathogenic nematode Oscheius sp. MCB living in soil;mol_type=genomic DNA;nat-host=Oscheius sp. MCB;strain=MCB NZ_JPQY01000096.1 RefSeq gene 433 969 . + . ID=gene-IY40_RS25700;Name=IY40_RS25700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS25700 NZ_JPQY01000096.1 Protein Homology CDS 433 969 . + 0 ID=cds-WP_072008296.1;Parent=gene-IY40_RS25700;Dbxref=GenBank:WP_072008296.1;Name=WP_072008296.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000056329.1;locus_tag=IY40_RS25700;product=hypothetical protein;protein_id=WP_072008296.1;transl_table=11 NZ_JPQY01000096.1 RefSeq gene 1193 2551 . + . ID=gene-IY40_RS25705;Name=IY40_RS25705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS25705 NZ_JPQY01000096.1 Protein Homology CDS 1193 2551 . + 0 ID=cds-WP_152561327.1;Parent=gene-IY40_RS25705;Dbxref=GenBank:WP_152561327.1;Name=WP_152561327.1;Ontology_term=GO:0004674,GO:0005524;gbkey=CDS;go_function=protein serine/threonine kinase activity|0004674||IEA,ATP binding|0005524||IEA;inference=COORDINATES: protein motif:HMM:NF012298.6;locus_tag=IY40_RS25705;product=serine/threonine protein kinase;protein_id=WP_152561327.1;transl_table=11 NZ_JPQY01000096.1 RefSeq gene 2866 4092 . - . ID=gene-IY40_RS24755;Name=IY40_RS24755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS24755;old_locus_tag=IY40_25285 NZ_JPQY01000096.1 Protein Homology CDS 2866 4092 . - 0 ID=cds-WP_043144096.1;Parent=gene-IY40_RS24755;Dbxref=GenBank:WP_043144096.1;Name=WP_043144096.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001566974.1;locus_tag=IY40_RS24755;product=deoxyguanosinetriphosphate triphosphohydrolase family protein;protein_id=WP_043144096.1;transl_table=11 ##sequence-region NZ_JPQY01000097.1 1 703 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=615 NZ_JPQY01000097.1 RefSeq region 1 703 . + . ID=NZ_JPQY01000097.1:1..703;Dbxref=taxon:615;collected-by=Mahloro H. Serepa%3B Vincent M. Gray;collection-date=2013-04-11;country=South Africa: North West Province;gbkey=Src;genome=genomic;identified-by=Mahloro H. Serepa%3B Vincent M. Gray;isolation-source=entomopathogenic nematode Oscheius sp. MCB living in soil;mol_type=genomic DNA;nat-host=Oscheius sp. MCB;strain=MCB NZ_JPQY01000097.1 RefSeq pseudogene 1 367 . + . ID=gene-IY40_RS26600;Name=IY40_RS26600;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IY40_RS26600;partial=true;pseudo=true;start_range=.,1 NZ_JPQY01000097.1 GeneMarkS-2+ CDS 1 367 . + 1 ID=cds-IY40_RS26600;Parent=gene-IY40_RS26600;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IY40_RS26600;partial=true;product=shufflon system plasmid conjugative transfer pilus tip adhesin PilV;pseudo=true;start_range=.,1;transl_table=11 NZ_JPQY01000097.1 RefSeq pseudogene 451 703 . - . ID=gene-IY40_RS26605;Name=IY40_RS26605;end_range=703,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IY40_RS26605;partial=true;pseudo=true NZ_JPQY01000097.1 GeneMarkS-2+ CDS 451 703 . - 1 ID=cds-IY40_RS26605;Parent=gene-IY40_RS26605;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=703,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IY40_RS26605;partial=true;product=shufflon system plasmid conjugative transfer pilus tip adhesin PilV;pseudo=true;transl_table=11 ##sequence-region NZ_JPQY01000098.1 1 868 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=615 NZ_JPQY01000098.1 RefSeq region 1 868 . + . ID=NZ_JPQY01000098.1:1..868;Dbxref=taxon:615;collected-by=Mahloro H. Serepa%3B Vincent M. Gray;collection-date=2013-04-11;country=South Africa: North West Province;gbkey=Src;genome=genomic;identified-by=Mahloro H. Serepa%3B Vincent M. Gray;isolation-source=entomopathogenic nematode Oscheius sp. MCB living in soil;mol_type=genomic DNA;nat-host=Oscheius sp. MCB;strain=MCB NZ_JPQY01000098.1 RefSeq pseudogene 1 175 . - . ID=gene-IY40_RS26190;Name=IY40_RS26190;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IY40_RS26190;partial=true;pseudo=true;start_range=.,1 NZ_JPQY01000098.1 Protein Homology CDS 1 175 . - 0 ID=cds-IY40_RS26190;Parent=gene-IY40_RS26190;Note=is involved in the transport of the murein peptide L-alanyl-gamma-D-glutamyl-meso-diaminopimelate%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004932156.1;locus_tag=IY40_RS26190;partial=true;product=oligopeptide ABC transporter substrate-binding protein OppA;pseudo=true;start_range=.,1;transl_table=11 ##sequence-region NZ_JPQY01000099.1 1 1364 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=615 NZ_JPQY01000099.1 RefSeq region 1 1364 . + . ID=NZ_JPQY01000099.1:1..1364;Dbxref=taxon:615;collected-by=Mahloro H. Serepa%3B Vincent M. Gray;collection-date=2013-04-11;country=South Africa: North West Province;gbkey=Src;genome=genomic;identified-by=Mahloro H. Serepa%3B Vincent M. Gray;isolation-source=entomopathogenic nematode Oscheius sp. MCB living in soil;mol_type=genomic DNA;nat-host=Oscheius sp. MCB;strain=MCB NZ_JPQY01000099.1 RefSeq gene 115 840 . + . ID=gene-IY40_RS24920;Name=IY40_RS24920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS24920;old_locus_tag=IY40_25295 NZ_JPQY01000099.1 Protein Homology CDS 115 840 . + 0 ID=cds-WP_049205755.1;Parent=gene-IY40_RS24920;Dbxref=GenBank:WP_049205755.1;Name=WP_049205755.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: protein motif:HMM:NF012698.6;locus_tag=IY40_RS24920;product=winged helix-turn-helix domain-containing protein;protein_id=WP_049205755.1;transl_table=11 NZ_JPQY01000099.1 RefSeq gene 830 1294 . + . ID=gene-IY40_RS24765;Name=IY40_RS24765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS24765;old_locus_tag=IY40_25300 NZ_JPQY01000099.1 GeneMarkS-2+ CDS 830 1294 . + 0 ID=cds-WP_152561328.1;Parent=gene-IY40_RS24765;Dbxref=GenBank:WP_152561328.1;Name=WP_152561328.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IY40_RS24765;product=hypothetical protein;protein_id=WP_152561328.1;transl_table=11 ##sequence-region NZ_JPQY01000100.1 1 879 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=615 NZ_JPQY01000100.1 RefSeq region 1 879 . + . ID=NZ_JPQY01000100.1:1..879;Dbxref=taxon:615;collected-by=Mahloro H. Serepa%3B Vincent M. Gray;collection-date=2013-04-11;country=South Africa: North West Province;gbkey=Src;genome=genomic;identified-by=Mahloro H. Serepa%3B Vincent M. Gray;isolation-source=entomopathogenic nematode Oscheius sp. MCB living in soil;mol_type=genomic DNA;nat-host=Oscheius sp. MCB;strain=MCB ##sequence-region NZ_JPQY01000101.1 1 1342 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=615 NZ_JPQY01000101.1 RefSeq region 1 1342 . + . ID=NZ_JPQY01000101.1:1..1342;Dbxref=taxon:615;collected-by=Mahloro H. Serepa%3B Vincent M. Gray;collection-date=2013-04-11;country=South Africa: North West Province;gbkey=Src;genome=genomic;identified-by=Mahloro H. Serepa%3B Vincent M. Gray;isolation-source=entomopathogenic nematode Oscheius sp. MCB living in soil;mol_type=genomic DNA;nat-host=Oscheius sp. MCB;strain=MCB NZ_JPQY01000101.1 RefSeq gene 532 1059 . - . ID=gene-IY40_RS26200;Name=IY40_RS26200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS26200 NZ_JPQY01000101.1 GeneMarkS-2+ CDS 532 1059 . - 0 ID=cds-WP_152561330.1;Parent=gene-IY40_RS26200;Dbxref=GenBank:WP_152561330.1;Name=WP_152561330.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IY40_RS26200;product=hypothetical protein;protein_id=WP_152561330.1;transl_table=11 NZ_JPQY01000101.1 RefSeq pseudogene 1056 1342 . - . ID=gene-IY40_RS26610;Name=IY40_RS26610;end_range=1342,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=IY40_RS26610;partial=true;pseudo=true NZ_JPQY01000101.1 GeneMarkS-2+ CDS 1056 1342 . - 2 ID=cds-IY40_RS26610;Parent=gene-IY40_RS26610;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=1342,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=IY40_RS26610;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region NZ_JPQY01000102.1 1 813 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=615 NZ_JPQY01000102.1 RefSeq region 1 813 . + . ID=NZ_JPQY01000102.1:1..813;Dbxref=taxon:615;collected-by=Mahloro H. Serepa%3B Vincent M. Gray;collection-date=2013-04-11;country=South Africa: North West Province;gbkey=Src;genome=genomic;identified-by=Mahloro H. Serepa%3B Vincent M. Gray;isolation-source=entomopathogenic nematode Oscheius sp. MCB living in soil;mol_type=genomic DNA;nat-host=Oscheius sp. MCB;strain=MCB NZ_JPQY01000102.1 RefSeq gene 1 813 . + . ID=gene-IY40_RS24770;Name=IY40_RS24770;end_range=813,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=IY40_RS24770;old_locus_tag=IY40_25320;partial=true;start_range=.,1 NZ_JPQY01000102.1 Protein Homology CDS 1 813 . + 1 ID=cds-WP_043144116.1;Parent=gene-IY40_RS24770;Dbxref=GenBank:WP_043144116.1;Name=WP_043144116.1;Ontology_term=GO:0006979,GO:0004601,GO:0020037;end_range=813,.;gbkey=CDS;go_function=peroxidase activity|0004601||IEA,heme binding|0020037||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019452452.1;locus_tag=IY40_RS24770;partial=true;product=peroxidase family protein;protein_id=WP_043144116.1;start_range=.,1;transl_table=11 ##sequence-region NZ_JPQY01000103.1 1 709 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=615 NZ_JPQY01000103.1 RefSeq region 1 709 . + . ID=NZ_JPQY01000103.1:1..709;Dbxref=taxon:615;collected-by=Mahloro H. Serepa%3B Vincent M. Gray;collection-date=2013-04-11;country=South Africa: North West Province;gbkey=Src;genome=genomic;identified-by=Mahloro H. Serepa%3B Vincent M. Gray;isolation-source=entomopathogenic nematode Oscheius sp. MCB living in soil;mol_type=genomic DNA;nat-host=Oscheius sp. MCB;strain=MCB NZ_JPQY01000103.1 RefSeq pseudogene 1 70 . - . ID=gene-IY40_RS26205;Name=purN;gbkey=Gene;gene=purN;gene_biotype=pseudogene;locus_tag=IY40_RS26205;partial=true;pseudo=true;start_range=.,1 NZ_JPQY01000103.1 Protein Homology CDS 1 70 . - 0 ID=cds-IY40_RS26205;Parent=gene-IY40_RS26205;Note=glycinamide ribonucleotide transformylase%3B GAR Tfase%3B catalyzes the synthesis of 5'-phosphoribosylformylglycinamide from 5'-phosphoribosylglycinamide and 10-formyltetrahydrofolate%3B PurN requires formyl folate for the reaction unlike PurT which uses formate%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;gene=purN;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004959944.1;locus_tag=IY40_RS26205;partial=true;product=phosphoribosylglycinamide formyltransferase;pseudo=true;start_range=.,1;transl_table=11 NZ_JPQY01000103.1 RefSeq pseudogene 70 709 . - . ID=gene-IY40_RS24775;Name=purM;end_range=709,.;gbkey=Gene;gene=purM;gene_biotype=pseudogene;locus_tag=IY40_RS24775;old_locus_tag=IY40_25325;partial=true;pseudo=true NZ_JPQY01000103.1 Protein Homology CDS 70 709 . - 1 ID=cds-IY40_RS24775;Parent=gene-IY40_RS24775;Note=internal stop%3B incomplete%3B missing N-terminus;Ontology_term=GO:0006189,GO:0004641;end_range=709,.;gbkey=CDS;gene=purM;go_function=phosphoribosylformylglycinamidine cyclo-ligase activity|0004641||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012440802.1;locus_tag=IY40_RS24775;partial=true;product=phosphoribosylformylglycinamidine cyclo-ligase;pseudo=true;transl_table=11 ###