##gff-version 3 #!gff-spec-version 1.21 #!processor NCBI annotwriter #!genome-build 5139_3#3 #!genome-build-accession NCBI_Assembly:GCF_001110725.1 #!annotation-date 02/10/2026 09:29:25 #!annotation-source NCBI RefSeq GCF_001110725.1-RS_2026_02_10 ##sequence-region NZ_CPUY01000001.1 1 466461 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=633 NZ_CPUY01000001.1 RefSeq region 1 466461 . + . ID=NZ_CPUY01000001.1:1..466461;Dbxref=taxon:633;collection-date=1900/2008;country=South Africa;gbkey=Src;genome=genomic;isolation-source=not known;mol_type=genomic DNA;nat-host=pig;serovar=O:3;strain=IP32544 NZ_CPUY01000001.1 RefSeq gene 103 489 . - . ID=gene-AD853_RS00005;Name=mutT;gbkey=Gene;gene=mutT;gene_biotype=protein_coding;locus_tag=AD853_RS00005;old_locus_tag=ERS008462_00001 NZ_CPUY01000001.1 Protein Homology CDS 103 489 . - 0 ID=cds-WP_002210424.1;Parent=gene-AD853_RS00005;Dbxref=GenBank:WP_002210424.1;Name=WP_002210424.1;Ontology_term=GO:0006281,GO:0008413;gbkey=CDS;gene=mutT;go_function=8-oxo-7%2C8-dihydroguanosine triphosphate pyrophosphatase activity|0008413||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210424.1;locus_tag=AD853_RS00005;product=8-oxo-dGTP diphosphatase MutT;protein_id=WP_002210424.1;transl_table=11 NZ_CPUY01000001.1 RefSeq pseudogene 667 759 . + . ID=gene-AD853_RS21710;Name=AD853_RS21710;end_range=759,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD853_RS21710;partial=true;pseudo=true NZ_CPUY01000001.1 Protein Homology CDS 667 759 . + 0 ID=cds-AD853_RS21710;Parent=gene-AD853_RS21710;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=759,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002378124.1;locus_tag=AD853_RS21710;partial=true;product=gluconate 5-dehydrogenase;pseudo=true;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 784 3498 . - . ID=gene-AD853_RS00010;Name=secA;gbkey=Gene;gene=secA;gene_biotype=protein_coding;locus_tag=AD853_RS00010;old_locus_tag=ERS008462_00002 NZ_CPUY01000001.1 Protein Homology CDS 784 3498 . - 0 ID=cds-WP_002210426.1;Parent=gene-AD853_RS00010;Dbxref=GenBank:WP_002210426.1;Name=WP_002210426.1;Ontology_term=GO:0006605,GO:0006886,GO:0017038,GO:0005524;gbkey=CDS;gene=secA;go_function=ATP binding|0005524||IEA;go_process=protein targeting|0006605||IEA,intracellular protein transport|0006886||IEA,protein import|0017038||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308129.1;locus_tag=AD853_RS00010;product=preprotein translocase subunit SecA;protein_id=WP_002210426.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 3576 4109 . - . ID=gene-AD853_RS00015;Name=secM;gbkey=Gene;gene=secM;gene_biotype=protein_coding;locus_tag=AD853_RS00015;old_locus_tag=ERS008462_00003 NZ_CPUY01000001.1 Protein Homology CDS 3576 4109 . - 0 ID=cds-WP_011191738.1;Parent=gene-AD853_RS00015;Dbxref=GenBank:WP_011191738.1;Name=WP_011191738.1;Ontology_term=GO:0045182;gbkey=CDS;gene=secM;go_function=translation regulator activity|0045182||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210427.1;locus_tag=AD853_RS00015;product=secA translation cis-regulator SecM;protein_id=WP_011191738.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 4138 4662 . + . ID=gene-AD853_RS00020;Name=AD853_RS00020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS00020;old_locus_tag=ERS008462_00004 NZ_CPUY01000001.1 Protein Homology CDS 4138 4662 . + 0 ID=cds-WP_002210428.1;Parent=gene-AD853_RS00020;Dbxref=GenBank:WP_002210428.1;Name=WP_002210428.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210428.1;locus_tag=AD853_RS00020;product=DUF721 domain-containing protein;protein_id=WP_002210428.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 4829 5749 . - . ID=gene-AD853_RS00025;Name=lpxC;gbkey=Gene;gene=lpxC;gene_biotype=protein_coding;locus_tag=AD853_RS00025;old_locus_tag=ERS008462_00005 NZ_CPUY01000001.1 Protein Homology CDS 4829 5749 . - 0 ID=cds-WP_002228285.1;Parent=gene-AD853_RS00025;Dbxref=GenBank:WP_002228285.1;Name=WP_002228285.1;Ontology_term=GO:0009245,GO:0103117;gbkey=CDS;gene=lpxC;go_function=UDP-3-O-acyl-N-acetylglucosamine deacetylase activity|0103117||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005181431.1;locus_tag=AD853_RS00025;product=UDP-3-O-acyl-N-acetylglucosamine deacetylase;protein_id=WP_002228285.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 5849 7000 . - . ID=gene-AD853_RS00030;Name=ftsZ;gbkey=Gene;gene=ftsZ;gene_biotype=protein_coding;locus_tag=AD853_RS00030;old_locus_tag=ERS008462_00006 NZ_CPUY01000001.1 Protein Homology CDS 5849 7000 . - 0 ID=cds-WP_002210430.1;Parent=gene-AD853_RS00030;Dbxref=GenBank:WP_002210430.1;Name=WP_002210430.1;Ontology_term=GO:0000910,GO:0003924,GO:0005525;gbkey=CDS;gene=ftsZ;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015965916.1;locus_tag=AD853_RS00030;product=cell division protein FtsZ;protein_id=WP_002210430.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 7073 8329 . - . ID=gene-AD853_RS00035;Name=ftsA;gbkey=Gene;gene=ftsA;gene_biotype=protein_coding;locus_tag=AD853_RS00035;old_locus_tag=ERS008462_00007 NZ_CPUY01000001.1 Protein Homology CDS 7073 8329 . - 0 ID=cds-WP_002210431.1;Parent=gene-AD853_RS00035;Dbxref=GenBank:WP_002210431.1;Name=WP_002210431.1;Ontology_term=GO:0051301,GO:0005515;gbkey=CDS;gene=ftsA;go_function=protein binding|0005515||IEA;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459137.1;locus_tag=AD853_RS00035;product=cell division protein FtsA;protein_id=WP_002210431.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 8356 9183 . - . ID=gene-AD853_RS00040;Name=ftsQ;gbkey=Gene;gene=ftsQ;gene_biotype=protein_coding;locus_tag=AD853_RS00040;old_locus_tag=ERS008462_00008 NZ_CPUY01000001.1 Protein Homology CDS 8356 9183 . - 0 ID=cds-WP_011191736.1;Parent=gene-AD853_RS00040;Dbxref=GenBank:WP_011191736.1;Name=WP_011191736.1;Ontology_term=GO:0090529;gbkey=CDS;gene=ftsQ;go_process=cell septum assembly|0090529||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002420359.1;locus_tag=AD853_RS00040;product=cell division protein FtsQ;protein_id=WP_011191736.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 9185 10105 . - . ID=gene-AD853_RS00045;Name=AD853_RS00045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS00045;old_locus_tag=ERS008462_00009 NZ_CPUY01000001.1 Protein Homology CDS 9185 10105 . - 0 ID=cds-WP_002210432.1;Parent=gene-AD853_RS00045;Dbxref=GenBank:WP_002210432.1;Name=WP_002210432.1;Ontology_term=GO:0009252,GO:0005524,GO:0008716,GO:0046872;gbkey=CDS;go_function=ATP binding|0005524||IEA,D-alanine-D-alanine ligase activity|0008716||IEA,metal ion binding|0046872||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210432.1;locus_tag=AD853_RS00045;product=D-alanine--D-alanine ligase;protein_id=WP_002210432.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 10098 11573 . - . ID=gene-AD853_RS00050;Name=murC;gbkey=Gene;gene=murC;gene_biotype=protein_coding;locus_tag=AD853_RS00050;old_locus_tag=ERS008462_00010 NZ_CPUY01000001.1 Protein Homology CDS 10098 11573 . - 0 ID=cds-WP_038401631.1;Parent=gene-AD853_RS00050;Dbxref=GenBank:WP_038401631.1;Name=WP_038401631.1;Ontology_term=GO:0009252,GO:0008763;gbkey=CDS;gene=murC;go_function=UDP-N-acetylmuramate-L-alanine ligase activity|0008763||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004932766.1;locus_tag=AD853_RS00050;product=UDP-N-acetylmuramate--L-alanine ligase;protein_id=WP_038401631.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 11711 12781 . - . ID=gene-AD853_RS00055;Name=murG;gbkey=Gene;gene=murG;gene_biotype=protein_coding;locus_tag=AD853_RS00055;old_locus_tag=ERS008462_00011 NZ_CPUY01000001.1 Protein Homology CDS 11711 12781 . - 0 ID=cds-WP_038824090.1;Parent=gene-AD853_RS00055;Dbxref=GenBank:WP_038824090.1;Name=WP_038824090.1;Ontology_term=GO:0009252,GO:0050511;gbkey=CDS;gene=murG;go_function=undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase activity|0050511||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011906408.1;locus_tag=AD853_RS00055;product=undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase;protein_id=WP_038824090.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 12778 13980 . - . ID=gene-AD853_RS00060;Name=ftsW;gbkey=Gene;gene=ftsW;gene_biotype=protein_coding;locus_tag=AD853_RS00060;old_locus_tag=ERS008462_00012 NZ_CPUY01000001.1 Protein Homology CDS 12778 13980 . - 0 ID=cds-WP_002210435.1;Parent=gene-AD853_RS00060;Dbxref=GenBank:WP_002210435.1;Name=WP_002210435.1;Ontology_term=GO:0051301;gbkey=CDS;gene=ftsW;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210435.1;locus_tag=AD853_RS00060;product=cell division protein FtsW;protein_id=WP_002210435.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 13980 15296 . - . ID=gene-AD853_RS00065;Name=murD;gbkey=Gene;gene=murD;gene_biotype=protein_coding;locus_tag=AD853_RS00065;old_locus_tag=ERS008462_00013 NZ_CPUY01000001.1 Protein Homology CDS 13980 15296 . - 0 ID=cds-WP_012304586.1;Parent=gene-AD853_RS00065;Dbxref=GenBank:WP_012304586.1;Name=WP_012304586.1;Ontology_term=GO:0008360,GO:0009252,GO:0051301,GO:0005524,GO:0008764,GO:0005737;gbkey=CDS;gene=murD;go_component=cytoplasm|0005737||IEA;go_function=ATP binding|0005524||IEA,UDP-N-acetylmuramoylalanine-D-glutamate ligase activity|0008764||IEA;go_process=regulation of cell shape|0008360||IEA,peptidoglycan biosynthetic process|0009252||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105672.1;locus_tag=AD853_RS00065;product=UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase;protein_id=WP_012304586.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 15299 16381 . - . ID=gene-AD853_RS00070;Name=mraY;gbkey=Gene;gene=mraY;gene_biotype=protein_coding;locus_tag=AD853_RS00070;old_locus_tag=ERS008462_00014 NZ_CPUY01000001.1 Protein Homology CDS 15299 16381 . - 0 ID=cds-WP_002210437.1;Parent=gene-AD853_RS00070;Dbxref=GenBank:WP_002210437.1;Name=WP_002210437.1;Ontology_term=GO:0009252,GO:0008963,GO:0016020;gbkey=CDS;gene=mraY;go_component=membrane|0016020||IEA;go_function=phospho-N-acetylmuramoyl-pentapeptide-transferase activity|0008963||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124610.1;locus_tag=AD853_RS00070;product=phospho-N-acetylmuramoyl-pentapeptide-transferase;protein_id=WP_002210437.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 16375 17751 . - . ID=gene-AD853_RS00075;Name=murF;gbkey=Gene;gene=murF;gene_biotype=protein_coding;locus_tag=AD853_RS00075;old_locus_tag=ERS008462_00015 NZ_CPUY01000001.1 Protein Homology CDS 16375 17751 . - 0 ID=cds-WP_011191733.1;Parent=gene-AD853_RS00075;Dbxref=GenBank:WP_011191733.1;Name=WP_011191733.1;Ontology_term=GO:0009058,GO:0071555,GO:0005524,GO:0047480;gbkey=CDS;gene=murF;go_function=ATP binding|0005524||IEA,UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity|0047480||IEA;go_process=biosynthetic process|0009058||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011191733.1;locus_tag=AD853_RS00075;product=UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase;protein_id=WP_011191733.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 17748 19235 . - . ID=gene-AD853_RS00080;Name=murE;gbkey=Gene;gene=murE;gene_biotype=protein_coding;locus_tag=AD853_RS00080;old_locus_tag=ERS008462_00016 NZ_CPUY01000001.1 Protein Homology CDS 17748 19235 . - 0 ID=cds-WP_012105673.1;Parent=gene-AD853_RS00080;Dbxref=GenBank:WP_012105673.1;Name=WP_012105673.1;Ontology_term=GO:0008360,GO:0009058,GO:0051301,GO:0005524,GO:0016881;gbkey=CDS;gene=murE;go_function=ATP binding|0005524||IEA,acid-amino acid ligase activity|0016881||IEA;go_process=regulation of cell shape|0008360||IEA,biosynthetic process|0009058||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210439.1;locus_tag=AD853_RS00080;product=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2%2C6-diaminopimelate ligase;protein_id=WP_012105673.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 19222 20985 . - . ID=gene-AD853_RS00085;Name=AD853_RS00085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS00085;old_locus_tag=ERS008462_00017 NZ_CPUY01000001.1 Protein Homology CDS 19222 20985 . - 0 ID=cds-WP_011191731.1;Parent=gene-AD853_RS00085;Dbxref=GenBank:WP_011191731.1;Name=WP_011191731.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004388992.1;locus_tag=AD853_RS00085;product=peptidoglycan glycosyltransferase FtsI;protein_id=WP_011191731.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 21051 21368 . - . ID=gene-AD853_RS00090;Name=ftsL;gbkey=Gene;gene=ftsL;gene_biotype=protein_coding;locus_tag=AD853_RS00090;old_locus_tag=ERS008462_00018 NZ_CPUY01000001.1 Protein Homology CDS 21051 21368 . - 0 ID=cds-WP_002210441.1;Parent=gene-AD853_RS00090;Dbxref=GenBank:WP_002210441.1;Name=WP_002210441.1;gbkey=CDS;gene=ftsL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210441.1;locus_tag=AD853_RS00090;product=cell division protein FtsL;protein_id=WP_002210441.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 21365 22327 . - . ID=gene-AD853_RS00095;Name=rsmH;gbkey=Gene;gene=rsmH;gene_biotype=protein_coding;locus_tag=AD853_RS00095;old_locus_tag=ERS008462_00019 NZ_CPUY01000001.1 Protein Homology CDS 21365 22327 . - 0 ID=cds-WP_038824089.1;Parent=gene-AD853_RS00095;Dbxref=GenBank:WP_038824089.1;Name=WP_038824089.1;Ontology_term=GO:0000154,GO:0016434;gbkey=CDS;gene=rsmH;go_function=rRNA (cytosine) methyltransferase activity|0016434||IEA;go_process=rRNA modification|0000154||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210442.1;locus_tag=AD853_RS00095;product=16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH;protein_id=WP_038824089.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 22330 22788 . - . ID=gene-AD853_RS00100;Name=mraZ;gbkey=Gene;gene=mraZ;gene_biotype=protein_coding;locus_tag=AD853_RS00100;old_locus_tag=ERS008462_00020 NZ_CPUY01000001.1 Protein Homology CDS 22330 22788 . - 0 ID=cds-WP_038824087.1;Parent=gene-AD853_RS00100;Dbxref=GenBank:WP_038824087.1;Name=WP_038824087.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=mraZ;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005167064.1;locus_tag=AD853_RS00100;product=division/cell wall cluster transcriptional repressor MraZ;protein_id=WP_038824087.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 23343 23432 . - . ID=gene-AD853_RS21410;Name=AD853_RS21410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS21410 NZ_CPUY01000001.1 Protein Homology CDS 23343 23432 . - 0 ID=cds-WP_113773038.1;Parent=gene-AD853_RS21410;Dbxref=GenBank:WP_113773038.1;Name=WP_113773038.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002264692.1;locus_tag=AD853_RS21410;product=gluconate 5-dehydrogenase;protein_id=WP_113773038.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 23890 24330 . + . ID=gene-AD853_RS00105;Name=AD853_RS00105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS00105;old_locus_tag=ERS008462_00021 NZ_CPUY01000001.1 Protein Homology CDS 23890 24330 . + 0 ID=cds-WP_038824612.1;Parent=gene-AD853_RS00105;Dbxref=GenBank:WP_038824612.1;Name=WP_038824612.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210446.1;locus_tag=AD853_RS00105;product=L-alanine exporter AlaE;protein_id=WP_038824612.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 24461 25471 . - . ID=gene-AD853_RS00110;Name=cra;gbkey=Gene;gene=cra;gene_biotype=protein_coding;locus_tag=AD853_RS00110;old_locus_tag=ERS008462_00022 NZ_CPUY01000001.1 Protein Homology CDS 24461 25471 . - 0 ID=cds-WP_011191729.1;Parent=gene-AD853_RS00110;Dbxref=GenBank:WP_011191729.1;Name=WP_011191729.1;Ontology_term=GO:0006355,GO:0009750,GO:0003677;gbkey=CDS;gene=cra;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,response to fructose|0009750||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011191729.1;locus_tag=AD853_RS00110;product=catabolite repressor/activator;protein_id=WP_011191729.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 25920 26414 . - . ID=gene-AD853_RS00120;Name=ilvN;gbkey=Gene;gene=ilvN;gene_biotype=protein_coding;locus_tag=AD853_RS00120;old_locus_tag=ERS008462_00023 NZ_CPUY01000001.1 Protein Homology CDS 25920 26414 . - 0 ID=cds-WP_002210448.1;Parent=gene-AD853_RS00120;Dbxref=GenBank:WP_002210448.1;Name=WP_002210448.1;Ontology_term=GO:0009082,GO:1990610;gbkey=CDS;gene=ilvN;go_function=acetolactate synthase regulator activity|1990610||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004875571.1;locus_tag=AD853_RS00120;product=acetolactate synthase small subunit;protein_id=WP_002210448.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 26417 28144 . - . ID=gene-AD853_RS00125;Name=ilvI;gbkey=Gene;gene=ilvI;gene_biotype=protein_coding;locus_tag=AD853_RS00125;old_locus_tag=ERS008462_00024 NZ_CPUY01000001.1 Protein Homology CDS 26417 28144 . - 0 ID=cds-WP_002228103.1;Parent=gene-AD853_RS00125;Dbxref=GenBank:WP_002228103.1;Name=WP_002228103.1;Ontology_term=GO:0009082,GO:0000287,GO:0003984,GO:0030976,GO:0050660;gbkey=CDS;gene=ilvI;go_function=magnesium ion binding|0000287||IEA,acetolactate synthase activity|0003984||IEA,thiamine pyrophosphate binding|0030976||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_025294.2;locus_tag=AD853_RS00125;product=acetolactate synthase 3 large subunit;protein_id=WP_002228103.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 28604 30409 . - . ID=gene-AD853_RS00135;Name=AD853_RS00135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS00135;old_locus_tag=ERS008462_00025 NZ_CPUY01000001.1 Protein Homology CDS 28604 30409 . - 0 ID=cds-WP_002216437.1;Parent=gene-AD853_RS00135;Dbxref=GenBank:WP_002216437.1;Name=WP_002216437.1;Ontology_term=GO:0005524,GO:0015645;gbkey=CDS;go_function=ATP binding|0005524||IEA,fatty acid ligase activity|0015645||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002216437.1;locus_tag=AD853_RS00135;product=AMP-dependent synthetase/ligase;protein_id=WP_002216437.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 30936 31892 . - . ID=gene-AD853_RS00145;Name=leuO;gbkey=Gene;gene=leuO;gene_biotype=protein_coding;locus_tag=AD853_RS00145;old_locus_tag=ERS008462_00026 NZ_CPUY01000001.1 Protein Homology CDS 30936 31892 . - 0 ID=cds-WP_002216434.1;Parent=gene-AD853_RS00145;Dbxref=GenBank:WP_002216434.1;Name=WP_002216434.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=leuO;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002216434.1;locus_tag=AD853_RS00145;product=transcriptional regulator LeuO;protein_id=WP_002216434.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 32569 32760 . + . ID=gene-AD853_RS00150;Name=AD853_RS00150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS00150;old_locus_tag=ERS008462_00027 NZ_CPUY01000001.1 Protein Homology CDS 32569 32760 . + 0 ID=cds-WP_012413476.1;Parent=gene-AD853_RS00150;Dbxref=GenBank:WP_012413476.1;Name=WP_012413476.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210452.1;locus_tag=AD853_RS00150;product=hypothetical protein;protein_id=WP_012413476.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 33107 34669 . + . ID=gene-AD853_RS00155;Name=leuA;gbkey=Gene;gene=leuA;gene_biotype=protein_coding;locus_tag=AD853_RS00155;old_locus_tag=ERS008462_00029 NZ_CPUY01000001.1 Protein Homology CDS 33107 34669 . + 0 ID=cds-WP_002210453.1;Parent=gene-AD853_RS00155;Dbxref=GenBank:WP_002210453.1;Name=WP_002210453.1;Ontology_term=GO:0019752,GO:0003852;gbkey=CDS;gene=leuA;go_function=2-isopropylmalate synthase activity|0003852||IEA;go_process=carboxylic acid metabolic process|0019752||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012005196.1;locus_tag=AD853_RS00155;product=2-isopropylmalate synthase;protein_id=WP_002210453.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 34672 35763 . + . ID=gene-AD853_RS00160;Name=leuB;gbkey=Gene;gene=leuB;gene_biotype=protein_coding;locus_tag=AD853_RS00160;old_locus_tag=ERS008462_00030 NZ_CPUY01000001.1 Protein Homology CDS 34672 35763 . + 0 ID=cds-WP_038824614.1;Parent=gene-AD853_RS00160;Dbxref=GenBank:WP_038824614.1;Name=WP_038824614.1;Ontology_term=GO:0009098,GO:0003862;gbkey=CDS;gene=leuB;go_function=3-isopropylmalate dehydrogenase activity|0003862||IEA;go_process=L-leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105676.1;locus_tag=AD853_RS00160;product=3-isopropylmalate dehydrogenase;protein_id=WP_038824614.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 35765 37195 . + . ID=gene-AD853_RS00165;Name=leuC;gbkey=Gene;gene=leuC;gene_biotype=protein_coding;locus_tag=AD853_RS00165;old_locus_tag=ERS008462_00031 NZ_CPUY01000001.1 Protein Homology CDS 35765 37195 . + 0 ID=cds-WP_038824615.1;Parent=gene-AD853_RS00165;Dbxref=GenBank:WP_038824615.1;Name=WP_038824615.1;Ontology_term=GO:0009098,GO:0003861,GO:0051539,GO:0009316;gbkey=CDS;gene=leuC;go_component=3-isopropylmalate dehydratase complex|0009316||IEA;go_function=3-isopropylmalate dehydratase activity|0003861||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=L-leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210455.1;locus_tag=AD853_RS00165;product=3-isopropylmalate dehydratase large subunit;protein_id=WP_038824615.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 37210 37812 . + . ID=gene-AD853_RS00170;Name=leuD;gbkey=Gene;gene=leuD;gene_biotype=protein_coding;locus_tag=AD853_RS00170;old_locus_tag=ERS008462_00032 NZ_CPUY01000001.1 Protein Homology CDS 37210 37812 . + 0 ID=cds-WP_002210456.1;Parent=gene-AD853_RS00170;Dbxref=GenBank:WP_002210456.1;Name=WP_002210456.1;Ontology_term=GO:0009098,GO:0003861,GO:0009316;gbkey=CDS;gene=leuD;go_component=3-isopropylmalate dehydratase complex|0009316||IEA;go_function=3-isopropylmalate dehydratase activity|0003861||IEA;go_process=L-leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105677.1;locus_tag=AD853_RS00170;product=3-isopropylmalate dehydratase small subunit;protein_id=WP_002210456.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 38053 39234 . - . ID=gene-AD853_RS00175;Name=AD853_RS00175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS00175;old_locus_tag=ERS008462_00033 NZ_CPUY01000001.1 Protein Homology CDS 38053 39234 . - 0 ID=cds-WP_002224086.1;Parent=gene-AD853_RS00175;Dbxref=GenBank:WP_002224086.1;Name=WP_002224086.1;Ontology_term=GO:0008643,GO:0005351,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=carbohydrate:proton symporter activity|0005351||IEA;go_process=carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019080523.1;locus_tag=AD853_RS00175;product=sugar efflux transporter;protein_id=WP_002224086.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 39688 41349 . + . ID=gene-AD853_RS00180;Name=sgrR;gbkey=Gene;gene=sgrR;gene_biotype=protein_coding;locus_tag=AD853_RS00180;old_locus_tag=ERS008462_00034 NZ_CPUY01000001.1 Protein Homology CDS 39688 41349 . + 0 ID=cds-WP_011191725.1;Parent=gene-AD853_RS00180;Dbxref=GenBank:WP_011191725.1;Name=WP_011191725.1;gbkey=CDS;gene=sgrR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011191725.1;locus_tag=AD853_RS00180;product=HTH-type transcriptional regulator SgrR;protein_id=WP_011191725.1;transl_table=11 NZ_CPUY01000001.1 RefSeq pseudogene 41483 41903 . + . ID=gene-AD853_RS00185;Name=AD853_RS00185;end_range=41903,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD853_RS00185;old_locus_tag=ERS008462_00035;partial=true;pseudo=true;start_range=.,41483 NZ_CPUY01000001.1 Protein Homology CDS 41483 41903 . + 0 ID=cds-AD853_RS00185;Parent=gene-AD853_RS00185;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0015074;end_range=41903,.;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611501.1;locus_tag=AD853_RS00185;partial=true;product=DDE-type integrase/transposase/recombinase;pseudo=true;start_range=.,41483;transl_table=11 NZ_CPUY01000001.1 RefSeq pseudogene 41905 42123 . + . ID=gene-AD853_RS21930;Name=AD853_RS21930;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD853_RS21930;partial=true;pseudo=true;start_range=.,41905 NZ_CPUY01000001.1 Protein Homology CDS 41905 42123 . + 0 ID=cds-AD853_RS21930;Parent=gene-AD853_RS21930;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000728916.1;locus_tag=AD853_RS21930;partial=true;product=Rpn family recombination-promoting nuclease/putative transposase;pseudo=true;start_range=.,41905;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 42272 43774 . - . ID=gene-AD853_RS00195;Name=AD853_RS00195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS00195;old_locus_tag=ERS008462_00037 NZ_CPUY01000001.1 Protein Homology CDS 42272 43774 . - 0 ID=cds-WP_050124541.1;Parent=gene-AD853_RS00195;Dbxref=GenBank:WP_050124541.1;Name=WP_050124541.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000715082.1;locus_tag=AD853_RS00195;product=hypothetical protein;protein_id=WP_050124541.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 44413 45405 . + . ID=gene-AD853_RS00200;Name=thiB;gbkey=Gene;gene=thiB;gene_biotype=protein_coding;locus_tag=AD853_RS00200;old_locus_tag=ERS008462_00038 NZ_CPUY01000001.1 Protein Homology CDS 44413 45405 . + 0 ID=cds-WP_024063117.1;Parent=gene-AD853_RS00200;Dbxref=GenBank:WP_024063117.1;Name=WP_024063117.1;Ontology_term=GO:0015888,GO:0030975,GO:0048502,GO:0030288,GO:0055052;gbkey=CDS;gene=thiB;go_component=outer membrane-bounded periplasmic space|0030288||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=thiamine binding|0030975||IEA,ABC-type thiamine transporter activity|0048502||IEA;go_process=thiamine transport|0015888||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002214274.1;locus_tag=AD853_RS00200;product=thiamine ABC transporter substrate binding subunit;protein_id=WP_024063117.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 45381 46988 . + . ID=gene-AD853_RS00205;Name=thiP;gbkey=Gene;gene=thiP;gene_biotype=protein_coding;locus_tag=AD853_RS00205;old_locus_tag=ERS008462_00039 NZ_CPUY01000001.1 Protein Homology CDS 45381 46988 . + 0 ID=cds-WP_016582381.1;Parent=gene-AD853_RS00205;Dbxref=GenBank:WP_016582381.1;Name=WP_016582381.1;Ontology_term=GO:0015888,GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=thiP;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=thiamine transport|0015888||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002214276.1;locus_tag=AD853_RS00205;product=thiamine/thiamine pyrophosphate ABC transporter permease ThiP;protein_id=WP_016582381.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 46975 47685 . + . ID=gene-AD853_RS00210;Name=thiQ;gbkey=Gene;gene=thiQ;gene_biotype=protein_coding;locus_tag=AD853_RS00210;old_locus_tag=ERS008462_00040 NZ_CPUY01000001.1 Protein Homology CDS 46975 47685 . + 0 ID=cds-WP_038824616.1;Parent=gene-AD853_RS00210;Dbxref=GenBank:WP_038824616.1;Name=WP_038824616.1;gbkey=CDS;gene=thiQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210464.1;locus_tag=AD853_RS00210;product=thiamine ABC transporter ATP-binding protein ThiQ;protein_id=WP_038824616.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 47754 48521 . - . ID=gene-AD853_RS00215;Name=AD853_RS00215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS00215;old_locus_tag=ERS008462_00041 NZ_CPUY01000001.1 Protein Homology CDS 47754 48521 . - 0 ID=cds-WP_038824617.1;Parent=gene-AD853_RS00215;Dbxref=GenBank:WP_038824617.1;Name=WP_038824617.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210465.1;locus_tag=AD853_RS00215;product=DedA family protein;protein_id=WP_038824617.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 48717 51086 . + . ID=gene-AD853_RS00220;Name=AD853_RS00220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS00220;old_locus_tag=ERS008462_00042 NZ_CPUY01000001.1 Protein Homology CDS 48717 51086 . + 0 ID=cds-WP_002210466.1;Parent=gene-AD853_RS00220;Dbxref=GenBank:WP_002210466.1;Name=WP_002210466.1;Ontology_term=GO:0000166,GO:0003676,GO:0003887;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,nucleic acid binding|0003676||IEA,DNA-directed DNA polymerase activity|0003887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105679.1;locus_tag=AD853_RS00220;product=DNA polymerase II;protein_id=WP_002210466.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 51547 54453 . + . ID=gene-AD853_RS00225;Name=rapA;gbkey=Gene;gene=rapA;gene_biotype=protein_coding;locus_tag=AD853_RS00225;old_locus_tag=ERS008462_00043 NZ_CPUY01000001.1 Protein Homology CDS 51547 54453 . + 0 ID=cds-WP_011191719.1;Parent=gene-AD853_RS00225;Dbxref=GenBank:WP_011191719.1;Name=WP_011191719.1;Ontology_term=GO:0006355,GO:0005524,GO:0016817,GO:0140658;gbkey=CDS;gene=rapA;go_function=ATP binding|0005524||IEA,hydrolase activity%2C acting on acid anhydrides|0016817||IEA,ATP-dependent chromatin remodeler activity|0140658||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001117023.1;locus_tag=AD853_RS00225;product=RNA polymerase-associated protein RapA;protein_id=WP_011191719.1;transl_table=11 NZ_CPUY01000001.1 RefSeq pseudogene 54497 54565 . - . ID=gene-AD853_RS21940;Name=AD853_RS21940;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD853_RS21940;partial=true;pseudo=true;start_range=.,54497 NZ_CPUY01000001.1 Protein Homology CDS 54497 54565 . - 0 ID=cds-AD853_RS21940;Parent=gene-AD853_RS21940;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002224869.1;locus_tag=AD853_RS21940;partial=true;product=gluconate 5-dehydrogenase;pseudo=true;start_range=.,54497;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 54709 55062 . - . ID=gene-AD853_RS00230;Name=AD853_RS00230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS00230;old_locus_tag=ERS008462_00044 NZ_CPUY01000001.1 Protein Homology CDS 54709 55062 . - 0 ID=cds-WP_038824565.1;Parent=gene-AD853_RS00230;Dbxref=GenBank:WP_038824565.1;Name=WP_038824565.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210468.1;locus_tag=AD853_RS00230;product=DUF6277 family protein;protein_id=WP_038824565.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 55084 58578 . - . ID=gene-AD853_RS00235;Name=tssM;gbkey=Gene;gene=tssM;gene_biotype=protein_coding;locus_tag=AD853_RS00235;old_locus_tag=ERS008462_00045 NZ_CPUY01000001.1 Protein Homology CDS 55084 58578 . - 0 ID=cds-WP_038824564.1;Parent=gene-AD853_RS00235;Dbxref=GenBank:WP_038824564.1;Name=WP_038824564.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssM;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002228281.1;locus_tag=AD853_RS00235;product=type VI secretion system membrane subunit TssM;protein_id=WP_038824564.1;transl_table=11 NZ_CPUY01000001.1 RefSeq pseudogene 58587 60189 . - . ID=gene-AD853_RS00240;Name=icmH;gbkey=Gene;gene=icmH;gene_biotype=pseudogene;locus_tag=AD853_RS00240;old_locus_tag=ERS008462_00047;pseudo=true NZ_CPUY01000001.1 Protein Homology CDS 58587 60189 . - 0 ID=cds-AD853_RS00240;Parent=gene-AD853_RS00240;Note=frameshifted;gbkey=CDS;gene=icmH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210469.1;locus_tag=AD853_RS00240;product=type IVB secretion system protein IcmH/DotU;pseudo=true;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 60186 61541 . - . ID=gene-AD853_RS00245;Name=tssK;gbkey=Gene;gene=tssK;gene_biotype=protein_coding;locus_tag=AD853_RS00245;old_locus_tag=ERS008462_00048 NZ_CPUY01000001.1 Protein Homology CDS 60186 61541 . - 0 ID=cds-WP_002210470.1;Parent=gene-AD853_RS00245;Dbxref=GenBank:WP_002210470.1;Name=WP_002210470.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssK;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210470.1;locus_tag=AD853_RS00245;product=type VI secretion system baseplate subunit TssK;protein_id=WP_002210470.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 61643 62134 . - . ID=gene-AD853_RS00250;Name=tssJ;gbkey=Gene;gene=tssJ;gene_biotype=protein_coding;locus_tag=AD853_RS00250;old_locus_tag=ERS008462_00049 NZ_CPUY01000001.1 Protein Homology CDS 61643 62134 . - 0 ID=cds-WP_012304592.1;Parent=gene-AD853_RS00250;Dbxref=GenBank:WP_012304592.1;Name=WP_012304592.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssJ;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304592.1;locus_tag=AD853_RS00250;product=type VI secretion system lipoprotein TssJ;protein_id=WP_012304592.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 62127 62492 . - . ID=gene-AD853_RS00255;Name=AD853_RS00255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS00255;old_locus_tag=ERS008462_00050 NZ_CPUY01000001.1 Protein Homology CDS 62127 62492 . - 0 ID=cds-WP_038824563.1;Parent=gene-AD853_RS00255;Dbxref=GenBank:WP_038824563.1;Name=WP_038824563.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002214737.1;locus_tag=AD853_RS00255;product=PAAR-like domain-containing protein;protein_id=WP_038824563.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 62498 63115 . - . ID=gene-AD853_RS00260;Name=AD853_RS00260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS00260;old_locus_tag=ERS008462_00051 NZ_CPUY01000001.1 Protein Homology CDS 62498 63115 . - 0 ID=cds-WP_002210473.1;Parent=gene-AD853_RS00260;Dbxref=GenBank:WP_002210473.1;Name=WP_002210473.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210473.1;locus_tag=AD853_RS00260;product=DUF3540 domain-containing protein;protein_id=WP_002210473.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 63108 64211 . - . ID=gene-AD853_RS00265;Name=AD853_RS00265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS00265;old_locus_tag=ERS008462_00052 NZ_CPUY01000001.1 Protein Homology CDS 63108 64211 . - 0 ID=cds-WP_002214739.1;Parent=gene-AD853_RS00265;Dbxref=GenBank:WP_002214739.1;Name=WP_002214739.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002214739.1;locus_tag=AD853_RS00265;product=pentapeptide repeat-containing protein;protein_id=WP_002214739.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 64237 66456 . - . ID=gene-AD853_RS00270;Name=AD853_RS00270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS00270;old_locus_tag=ERS008462_00053 NZ_CPUY01000001.1 Protein Homology CDS 64237 66456 . - 0 ID=cds-WP_038824562.1;Parent=gene-AD853_RS00270;Dbxref=GenBank:WP_038824562.1;Name=WP_038824562.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011191716.1;locus_tag=AD853_RS00270;product=DUF2169 family type VI secretion system accessory protein;protein_id=WP_038824562.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 66469 68817 . - . ID=gene-AD853_RS00275;Name=vgrG;gbkey=Gene;gene=vgrG;gene_biotype=protein_coding;locus_tag=AD853_RS00275;old_locus_tag=ERS008462_00054 NZ_CPUY01000001.1 Protein Homology CDS 66469 68817 . - 0 ID=cds-WP_011191715.1;Parent=gene-AD853_RS00275;Dbxref=GenBank:WP_011191715.1;Name=WP_011191715.1;gbkey=CDS;gene=vgrG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105682.1;locus_tag=AD853_RS00275;product=type VI secretion system tip protein VgrG;protein_id=WP_011191715.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 68921 71509 . - . ID=gene-AD853_RS00280;Name=tssH;gbkey=Gene;gene=tssH;gene_biotype=protein_coding;gene_synonym=clpV;locus_tag=AD853_RS00280;old_locus_tag=ERS008462_00055 NZ_CPUY01000001.1 Protein Homology CDS 68921 71509 . - 0 ID=cds-WP_024063110.1;Parent=gene-AD853_RS00280;Dbxref=GenBank:WP_024063110.1;Name=WP_024063110.1;Ontology_term=GO:0033103,GO:0016887,GO:0033104;gbkey=CDS;gene=tssH;go_component=type VI protein secretion system complex|0033104||IEA;go_function=ATP hydrolysis activity|0016887||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012413471.1;locus_tag=AD853_RS00280;product=type VI secretion system ATPase TssH;protein_id=WP_024063110.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 71527 72510 . - . ID=gene-AD853_RS00285;Name=tssG;gbkey=Gene;gene=tssG;gene_biotype=protein_coding;locus_tag=AD853_RS00285;old_locus_tag=ERS008462_00056 NZ_CPUY01000001.1 Protein Homology CDS 71527 72510 . - 0 ID=cds-WP_012105683.1;Parent=gene-AD853_RS00285;Dbxref=GenBank:WP_012105683.1;Name=WP_012105683.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssG;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304593.1;locus_tag=AD853_RS00285;product=type VI secretion system baseplate subunit TssG;protein_id=WP_012105683.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 72503 74347 . - . ID=gene-AD853_RS00290;Name=tssF;gbkey=Gene;gene=tssF;gene_biotype=protein_coding;locus_tag=AD853_RS00290;old_locus_tag=ERS008462_00057 NZ_CPUY01000001.1 Protein Homology CDS 72503 74347 . - 0 ID=cds-WP_038825529.1;Parent=gene-AD853_RS00290;Dbxref=GenBank:WP_038825529.1;Name=WP_038825529.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssF;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304594.1;locus_tag=AD853_RS00290;product=type VI secretion system baseplate subunit TssF;protein_id=WP_038825529.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 74380 74823 . - . ID=gene-AD853_RS00295;Name=AD853_RS00295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS00295;old_locus_tag=ERS008462_00058 NZ_CPUY01000001.1 Protein Homology CDS 74380 74823 . - 0 ID=cds-WP_002210478.1;Parent=gene-AD853_RS00295;Dbxref=GenBank:WP_002210478.1;Name=WP_002210478.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210478.1;locus_tag=AD853_RS00295;product=type VI secretion system baseplate subunit TssE;protein_id=WP_002210478.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 74897 75415 . - . ID=gene-AD853_RS00300;Name=AD853_RS00300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS00300;old_locus_tag=ERS008462_00059 NZ_CPUY01000001.1 Protein Homology CDS 74897 75415 . - 0 ID=cds-WP_002210479.1;Parent=gene-AD853_RS00300;Dbxref=GenBank:WP_002210479.1;Name=WP_002210479.1;Ontology_term=GO:0033103;gbkey=CDS;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210479.1;locus_tag=AD853_RS00300;product=Hcp family type VI secretion system effector;protein_id=WP_002210479.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 75578 77080 . - . ID=gene-AD853_RS00305;Name=tssC;gbkey=Gene;gene=tssC;gene_biotype=protein_coding;locus_tag=AD853_RS00305;old_locus_tag=ERS008462_00060 NZ_CPUY01000001.1 Protein Homology CDS 75578 77080 . - 0 ID=cds-WP_038824566.1;Parent=gene-AD853_RS00305;Dbxref=GenBank:WP_038824566.1;Name=WP_038824566.1;Ontology_term=GO:0033103,GO:0033104;gbkey=CDS;gene=tssC;go_component=type VI protein secretion system complex|0033104||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210480.1;locus_tag=AD853_RS00305;product=type VI secretion system contractile sheath large subunit;protein_id=WP_038824566.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 77089 77649 . - . ID=gene-AD853_RS00310;Name=tssB;gbkey=Gene;gene=tssB;gene_biotype=protein_coding;locus_tag=AD853_RS00310;old_locus_tag=ERS008462_00061 NZ_CPUY01000001.1 Protein Homology CDS 77089 77649 . - 0 ID=cds-WP_002210481.1;Parent=gene-AD853_RS00310;Dbxref=GenBank:WP_002210481.1;Name=WP_002210481.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssB;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210481.1;locus_tag=AD853_RS00310;product=type VI secretion system contractile sheath small subunit;protein_id=WP_002210481.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 77660 78673 . - . ID=gene-AD853_RS00315;Name=AD853_RS00315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS00315;old_locus_tag=ERS008462_00062 NZ_CPUY01000001.1 Protein Homology CDS 77660 78673 . - 0 ID=cds-WP_002210482.1;Parent=gene-AD853_RS00315;Dbxref=GenBank:WP_002210482.1;Name=WP_002210482.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012229122.1;locus_tag=AD853_RS00315;product=type VI secretion system protein TssA;protein_id=WP_002210482.1;transl_table=11 NZ_CPUY01000001.1 RefSeq pseudogene 79003 79745 . + . ID=gene-AD853_RS00320;Name=rovC;gbkey=Gene;gene=rovC;gene_biotype=pseudogene;locus_tag=AD853_RS00320;old_locus_tag=ERS008462_00064;pseudo=true NZ_CPUY01000001.1 Protein Homology CDS 79003 79745 . + 0 ID=cds-AD853_RS00320;Parent=gene-AD853_RS00320;Note=RovC was described as a transcriptional activator for a type VI secretion system (T6SS).%3B frameshifted;gbkey=CDS;gene=rovC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002214747.1;locus_tag=AD853_RS00320;product=hexameric transcriptional regulator RovC;pseudo=true;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 80968 81588 . + . ID=gene-AD853_RS00325;Name=rluA;gbkey=Gene;gene=rluA;gene_biotype=protein_coding;locus_tag=AD853_RS00325;old_locus_tag=ERS008462_00065 NZ_CPUY01000001.1 Protein Homology CDS 80968 81588 . + 0 ID=cds-WP_002210485.1;Parent=gene-AD853_RS00325;Dbxref=GenBank:WP_002210485.1;Name=WP_002210485.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;gene=rluA;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210485.1;locus_tag=AD853_RS00325;product=bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA;protein_id=WP_002210485.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 81905 82738 . - . ID=gene-AD853_RS00330;Name=djlA;gbkey=Gene;gene=djlA;gene_biotype=protein_coding;locus_tag=AD853_RS00330;old_locus_tag=ERS008462_00066 NZ_CPUY01000001.1 Protein Homology CDS 81905 82738 . - 0 ID=cds-WP_011191713.1;Parent=gene-AD853_RS00330;Dbxref=GenBank:WP_011191713.1;Name=WP_011191713.1;Ontology_term=GO:0051087;gbkey=CDS;gene=djlA;go_function=protein-folding chaperone binding|0051087||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304596.1;locus_tag=AD853_RS00330;product=co-chaperone DjlA;protein_id=WP_011191713.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 82923 85265 . + . ID=gene-AD853_RS00335;Name=lptD;gbkey=Gene;gene=lptD;gene_biotype=protein_coding;locus_tag=AD853_RS00335;old_locus_tag=ERS008462_00067 NZ_CPUY01000001.1 Protein Homology CDS 82923 85265 . + 0 ID=cds-WP_011191712.1;Parent=gene-AD853_RS00335;Dbxref=GenBank:WP_011191712.1;Name=WP_011191712.1;Ontology_term=GO:0015920,GO:0043165,GO:0019867;gbkey=CDS;gene=lptD;go_component=outer membrane|0019867||IEA;go_process=lipopolysaccharide transport|0015920||IEA,Gram-negative-bacterium-type cell outer membrane assembly|0043165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016674007.1;locus_tag=AD853_RS00335;product=LPS assembly protein LptD;protein_id=WP_011191712.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 85333 86637 . + . ID=gene-AD853_RS00340;Name=surA;gbkey=Gene;gene=surA;gene_biotype=protein_coding;locus_tag=AD853_RS00340;old_locus_tag=ERS008462_00068 NZ_CPUY01000001.1 Protein Homology CDS 85333 86637 . + 0 ID=cds-WP_002210488.1;Parent=gene-AD853_RS00340;Dbxref=GenBank:WP_002210488.1;Name=WP_002210488.1;Ontology_term=GO:0006457,GO:0043165,GO:0050821,GO:0003755,GO:0042277,GO:0051082,GO:0030288;gbkey=CDS;gene=surA;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA,peptide binding|0042277||IEA,unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA,Gram-negative-bacterium-type cell outer membrane assembly|0043165||IEA,protein stabilization|0050821||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005193017.1;locus_tag=AD853_RS00340;product=peptidylprolyl isomerase SurA;protein_id=WP_002210488.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 86621 87616 . + . ID=gene-AD853_RS00345;Name=pdxA;gbkey=Gene;gene=pdxA;gene_biotype=protein_coding;locus_tag=AD853_RS00345;old_locus_tag=ERS008462_00069 NZ_CPUY01000001.1 Protein Homology CDS 86621 87616 . + 0 ID=cds-WP_002210489.1;Parent=gene-AD853_RS00345;Dbxref=GenBank:WP_002210489.1;Name=WP_002210489.1;Ontology_term=GO:0008615,GO:0050570;gbkey=CDS;gene=pdxA;go_function=4-hydroxythreonine-4-phosphate dehydrogenase activity|0050570||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005167004.1;locus_tag=AD853_RS00345;product=4-hydroxythreonine-4-phosphate dehydrogenase PdxA;protein_id=WP_002210489.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 87609 88427 . + . ID=gene-AD853_RS00350;Name=rsmA;gbkey=Gene;gene=rsmA;gene_biotype=protein_coding;locus_tag=AD853_RS00350;old_locus_tag=ERS008462_00070 NZ_CPUY01000001.1 Protein Homology CDS 87609 88427 . + 0 ID=cds-WP_011191710.1;Parent=gene-AD853_RS00350;Dbxref=GenBank:WP_011191710.1;Name=WP_011191710.1;Ontology_term=GO:0000154,GO:0006364,GO:0000179;gbkey=CDS;gene=rsmA;go_function=rRNA (adenine-N6%2CN6-)-dimethyltransferase activity|0000179||IEA;go_process=rRNA modification|0000154||IEA,rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012005175.1;locus_tag=AD853_RS00350;product=16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA;protein_id=WP_011191710.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 88441 88818 . + . ID=gene-AD853_RS00355;Name=apaG;gbkey=Gene;gene=apaG;gene_biotype=protein_coding;locus_tag=AD853_RS00355;old_locus_tag=ERS008462_00071 NZ_CPUY01000001.1 Protein Homology CDS 88441 88818 . + 0 ID=cds-WP_011191709.1;Parent=gene-AD853_RS00355;Dbxref=GenBank:WP_011191709.1;Name=WP_011191709.1;gbkey=CDS;gene=apaG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011095358.1;locus_tag=AD853_RS00355;product=Co2+/Mg2+ efflux protein ApaG;protein_id=WP_011191709.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 88835 89704 . + . ID=gene-AD853_RS00360;Name=apaH;gbkey=Gene;gene=apaH;gene_biotype=protein_coding;locus_tag=AD853_RS00360;old_locus_tag=ERS008462_00072 NZ_CPUY01000001.1 Protein Homology CDS 88835 89704 . + 0 ID=cds-WP_011191708.1;Parent=gene-AD853_RS00360;Dbxref=GenBank:WP_011191708.1;Name=WP_011191708.1;Ontology_term=GO:0008803;gbkey=CDS;gene=apaH;go_function=bis(5'-nucleosyl)-tetraphosphatase (symmetrical) activity|0008803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210492.1;locus_tag=AD853_RS00360;product=bis(5'-nucleosyl)-tetraphosphatase (symmetrical) ApaH;protein_id=WP_011191708.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 89794 90258 . - . ID=gene-AD853_RS00365;Name=AD853_RS00365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS00365;old_locus_tag=ERS008462_00073 NZ_CPUY01000001.1 Protein Homology CDS 89794 90258 . - 0 ID=cds-WP_038824547.1;Parent=gene-AD853_RS00365;Dbxref=GenBank:WP_038824547.1;Name=WP_038824547.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011191707.1;locus_tag=AD853_RS00365;product=DUF3757 domain-containing protein;protein_id=WP_038824547.1;transl_table=11 NZ_CPUY01000001.1 RefSeq pseudogene 90386 90699 . - . ID=gene-AD853_RS00370;Name=AD853_RS00370;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD853_RS00370;pseudo=true NZ_CPUY01000001.1 Protein Homology CDS 90386 90699 . - 0 ID=cds-AD853_RS00370;Parent=gene-AD853_RS00370;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304599.1;locus_tag=AD853_RS00370;product=DUF3757 domain-containing protein;pseudo=true;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 91097 91579 . - . ID=gene-AD853_RS00375;Name=folA;gbkey=Gene;gene=folA;gene_biotype=protein_coding;locus_tag=AD853_RS00375;old_locus_tag=ERS008462_00074 NZ_CPUY01000001.1 Protein Homology CDS 91097 91579 . - 0 ID=cds-WP_002210497.1;Parent=gene-AD853_RS00375;Dbxref=GenBank:WP_002210497.1;Name=WP_002210497.1;Ontology_term=GO:0046654,GO:0004146;gbkey=CDS;gene=folA;go_function=dihydrofolate reductase activity|0004146||IEA;go_process=tetrahydrofolate biosynthetic process|0046654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005270605.1;locus_tag=AD853_RS00375;product=type 3 dihydrofolate reductase;protein_id=WP_002210497.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 91729 92193 . - . ID=gene-AD853_RS00380;Name=AD853_RS00380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS00380;old_locus_tag=ERS008462_00075 NZ_CPUY01000001.1 Protein Homology CDS 91729 92193 . - 0 ID=cds-WP_038824546.1;Parent=gene-AD853_RS00380;Dbxref=GenBank:WP_038824546.1;Name=WP_038824546.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210498.1;locus_tag=AD853_RS00380;product=threonine/serine exporter;protein_id=WP_038824546.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 92190 92990 . - . ID=gene-AD853_RS00385;Name=AD853_RS00385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS00385;old_locus_tag=ERS008462_00076 NZ_CPUY01000001.1 Protein Homology CDS 92190 92990 . - 0 ID=cds-WP_011191704.1;Parent=gene-AD853_RS00385;Dbxref=GenBank:WP_011191704.1;Name=WP_011191704.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210499.1;locus_tag=AD853_RS00385;product=threonine/serine exporter family protein;protein_id=WP_011191704.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 93305 93919 . + . ID=gene-AD853_RS00390;Name=AD853_RS00390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS00390;old_locus_tag=ERS008462_00077 NZ_CPUY01000001.1 Protein Homology CDS 93305 93919 . + 0 ID=cds-WP_038824544.1;Parent=gene-AD853_RS00390;Dbxref=GenBank:WP_038824544.1;Name=WP_038824544.1;Ontology_term=GO:0006865,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105689.1;locus_tag=AD853_RS00390;product=LysE family transporter;protein_id=WP_038824544.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 94145 97378 . - . ID=gene-AD853_RS00395;Name=carB;gbkey=Gene;gene=carB;gene_biotype=protein_coding;locus_tag=AD853_RS00395;old_locus_tag=ERS008462_00078 NZ_CPUY01000001.1 Protein Homology CDS 94145 97378 . - 0 ID=cds-WP_011191702.1;Parent=gene-AD853_RS00395;Dbxref=GenBank:WP_011191702.1;Name=WP_011191702.1;Ontology_term=GO:0008152,GO:0005524,GO:0046872;gbkey=CDS;gene=carB;go_function=ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210502.1;locus_tag=AD853_RS00395;product=carbamoyl-phosphate synthase large subunit;protein_id=WP_011191702.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 97394 98569 . - . ID=gene-AD853_RS00400;Name=carA;gbkey=Gene;gene=carA;gene_biotype=protein_coding;locus_tag=AD853_RS00400;old_locus_tag=ERS008462_00079 NZ_CPUY01000001.1 Protein Homology CDS 97394 98569 . - 0 ID=cds-WP_002224759.1;Parent=gene-AD853_RS00400;Dbxref=GenBank:WP_002224759.1;Name=WP_002224759.1;Ontology_term=GO:0006207,GO:0006541,GO:0004088;gbkey=CDS;gene=carA;go_function=carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity|0004088||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA,glutamine metabolic process|0006541||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002224759.1;locus_tag=AD853_RS00400;product=glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit;protein_id=WP_002224759.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 99042 99863 . - . ID=gene-AD853_RS00405;Name=dapB;gbkey=Gene;gene=dapB;gene_biotype=protein_coding;locus_tag=AD853_RS00405;old_locus_tag=ERS008462_00080 NZ_CPUY01000001.1 Protein Homology CDS 99042 99863 . - 0 ID=cds-WP_038824543.1;Parent=gene-AD853_RS00405;Dbxref=GenBank:WP_038824543.1;Name=WP_038824543.1;Ontology_term=GO:0009089,GO:0008839;gbkey=CDS;gene=dapB;go_function=4-hydroxy-tetrahydrodipicolinate reductase|0008839||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004715936.1;locus_tag=AD853_RS00405;product=4-hydroxy-tetrahydrodipicolinate reductase;protein_id=WP_038824543.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 100370 100471 . + . ID=gene-AD853_RS21415;Name=AD853_RS21415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS21415 NZ_CPUY01000001.1 Protein Homology CDS 100370 100471 . + 0 ID=cds-WP_071840306.1;Parent=gene-AD853_RS21415;Dbxref=GenBank:WP_071840306.1;Name=WP_071840306.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002224869.1;locus_tag=AD853_RS21415;product=gluconate 5-dehydrogenase;protein_id=WP_071840306.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 100519 101472 . - . ID=gene-AD853_RS00410;Name=ispH;gbkey=Gene;gene=ispH;gene_biotype=protein_coding;gene_synonym=lytB;locus_tag=AD853_RS00410;old_locus_tag=ERS008462_00081 NZ_CPUY01000001.1 Protein Homology CDS 100519 101472 . - 0 ID=cds-WP_011191701.1;Parent=gene-AD853_RS00410;Dbxref=GenBank:WP_011191701.1;Name=WP_011191701.1;Ontology_term=GO:0019288,GO:0050992,GO:0046872,GO:0051745;gbkey=CDS;gene=ispH;go_function=metal ion binding|0046872||IEA,4-hydroxy-3-methylbut-2-enyl diphosphate reductase activity|0051745||IEA;go_process=isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA,dimethylallyl diphosphate biosynthetic process|0050992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005166985.1;locus_tag=AD853_RS00410;product=4-hydroxy-3-methylbut-2-enyl diphosphate reductase;protein_id=WP_011191701.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 101453 101911 . - . ID=gene-AD853_RS00415;Name=fkpB;gbkey=Gene;gene=fkpB;gene_biotype=protein_coding;locus_tag=AD853_RS00415;old_locus_tag=ERS008462_00082 NZ_CPUY01000001.1 Protein Homology CDS 101453 101911 . - 0 ID=cds-WP_002228112.1;Parent=gene-AD853_RS00415;Dbxref=GenBank:WP_002228112.1;Name=WP_002228112.1;Ontology_term=GO:0003755;gbkey=CDS;gene=fkpB;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105693.1;locus_tag=AD853_RS00415;product=FKBP-type peptidyl-prolyl cis-trans isomerase;protein_id=WP_002228112.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 101979 102488 . - . ID=gene-AD853_RS00420;Name=lspA;gbkey=Gene;gene=lspA;gene_biotype=protein_coding;locus_tag=AD853_RS00420;old_locus_tag=ERS008462_00083 NZ_CPUY01000001.1 Protein Homology CDS 101979 102488 . - 0 ID=cds-WP_002210508.1;Parent=gene-AD853_RS00420;Dbxref=GenBank:WP_002210508.1;Name=WP_002210508.1;Ontology_term=GO:0006508,GO:0009306,GO:0004190,GO:0005886;gbkey=CDS;gene=lspA;go_component=plasma membrane|0005886||IEA;go_function=aspartic-type endopeptidase activity|0004190||IEA;go_process=proteolysis|0006508||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210508.1;locus_tag=AD853_RS00420;product=signal peptidase II;protein_id=WP_002210508.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 102488 105304 . - . ID=gene-AD853_RS00425;Name=ileS;gbkey=Gene;gene=ileS;gene_biotype=protein_coding;locus_tag=AD853_RS00425;old_locus_tag=ERS008462_00084 NZ_CPUY01000001.1 Protein Homology CDS 102488 105304 . - 0 ID=cds-WP_038825010.1;Parent=gene-AD853_RS00425;Dbxref=GenBank:WP_038825010.1;Name=WP_038825010.1;Ontology_term=GO:0006428,GO:0000166,GO:0004822,GO:0005524;gbkey=CDS;gene=ileS;go_function=nucleotide binding|0000166||IEA,isoleucine-tRNA ligase activity|0004822||IEA,ATP binding|0005524||IEA;go_process=isoleucyl-tRNA aminoacylation|0006428||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_705981.1;locus_tag=AD853_RS00425;product=isoleucine--tRNA ligase;protein_id=WP_038825010.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 105336 106274 . - . ID=gene-AD853_RS00430;Name=ribF;gbkey=Gene;gene=ribF;gene_biotype=protein_coding;locus_tag=AD853_RS00430;old_locus_tag=ERS008462_00085 NZ_CPUY01000001.1 Protein Homology CDS 105336 106274 . - 0 ID=cds-WP_012304604.1;Parent=gene-AD853_RS00430;Dbxref=GenBank:WP_012304604.1;Name=WP_012304604.1;Ontology_term=GO:0003919;gbkey=CDS;gene=ribF;go_function=FMN adenylyltransferase activity|0003919||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005166981.1;locus_tag=AD853_RS00430;product=bifunctional riboflavin kinase/FAD synthetase;protein_id=WP_012304604.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 106689 106952 . + . ID=gene-AD853_RS00440;Name=rpsT;gbkey=Gene;gene=rpsT;gene_biotype=protein_coding;locus_tag=AD853_RS00440;old_locus_tag=ERS008462_00086 NZ_CPUY01000001.1 Protein Homology CDS 106689 106952 . + 0 ID=cds-WP_002220715.1;Parent=gene-AD853_RS00440;Dbxref=GenBank:WP_002220715.1;Name=WP_002220715.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsT;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019080555.1;locus_tag=AD853_RS00440;product=30S ribosomal protein S20;protein_id=WP_002220715.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 107083 107982 . - . ID=gene-AD853_RS00445;Name=nhaR;gbkey=Gene;gene=nhaR;gene_biotype=protein_coding;locus_tag=AD853_RS00445;old_locus_tag=ERS008462_00087 NZ_CPUY01000001.1 Protein Homology CDS 107083 107982 . - 0 ID=cds-WP_012304605.1;Parent=gene-AD853_RS00445;Dbxref=GenBank:WP_012304605.1;Name=WP_012304605.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=nhaR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002220713.1;locus_tag=AD853_RS00445;product=transcriptional activator NhaR;protein_id=WP_012304605.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 108112 109296 . - . ID=gene-AD853_RS00450;Name=nhaA;gbkey=Gene;gene=nhaA;gene_biotype=protein_coding;locus_tag=AD853_RS00450;old_locus_tag=ERS008462_00088 NZ_CPUY01000001.1 Protein Homology CDS 108112 109296 . - 0 ID=cds-WP_002220711.1;Parent=gene-AD853_RS00450;Dbxref=GenBank:WP_002220711.1;Name=WP_002220711.1;Ontology_term=GO:0006814,GO:0006885,GO:0015385,GO:0016020;gbkey=CDS;gene=nhaA;go_component=membrane|0016020||IEA;go_function=sodium:proton antiporter activity|0015385||IEA;go_process=sodium ion transport|0006814||IEA,regulation of pH|0006885||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002220711.1;locus_tag=AD853_RS00450;product=Na+/H+ antiporter NhaA;protein_id=WP_002220711.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 109539 110678 . - . ID=gene-AD853_RS00455;Name=dnaJ;gbkey=Gene;gene=dnaJ;gene_biotype=protein_coding;locus_tag=AD853_RS00455;old_locus_tag=ERS008462_00089 NZ_CPUY01000001.1 Protein Homology CDS 109539 110678 . - 0 ID=cds-WP_002209249.1;Parent=gene-AD853_RS00455;Dbxref=GenBank:WP_002209249.1;Name=WP_002209249.1;Ontology_term=GO:0006457,GO:0009408,GO:0005515,GO:0005524;gbkey=CDS;gene=dnaJ;go_function=protein binding|0005515||IEA,ATP binding|0005524||IEA;go_process=protein folding|0006457||IEA,response to heat|0009408||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012005145.1;locus_tag=AD853_RS00455;product=molecular chaperone DnaJ;protein_id=WP_002209249.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 110790 112700 . - . ID=gene-AD853_RS00460;Name=dnaK;gbkey=Gene;gene=dnaK;gene_biotype=protein_coding;locus_tag=AD853_RS00460;old_locus_tag=ERS008462_00091 NZ_CPUY01000001.1 Protein Homology CDS 110790 112700 . - 0 ID=cds-WP_038825011.1;Parent=gene-AD853_RS00460;Dbxref=GenBank:WP_038825011.1;Name=WP_038825011.1;Ontology_term=GO:0006457,GO:0005524,GO:0016887;gbkey=CDS;gene=dnaK;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001737966.1;locus_tag=AD853_RS00460;product=molecular chaperone DnaK;protein_id=WP_038825011.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 113074 113685 . + . ID=gene-AD853_RS00465;Name=satP;gbkey=Gene;gene=satP;gene_biotype=protein_coding;locus_tag=AD853_RS00465;old_locus_tag=ERS008462_00092 NZ_CPUY01000001.1 Protein Homology CDS 113074 113685 . + 0 ID=cds-WP_002209246.1;Parent=gene-AD853_RS00465;Dbxref=GenBank:WP_002209246.1;Name=WP_002209246.1;Ontology_term=GO:0016020;gbkey=CDS;gene=satP;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011191699.1;locus_tag=AD853_RS00465;product=acetate uptake transporter;protein_id=WP_002209246.1;transl_table=11 NZ_CPUY01000001.1 RefSeq pseudogene 113976 116425 . + . ID=gene-AD853_RS22405;Name=AD853_RS22405;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD853_RS22405;pseudo=true NZ_CPUY01000001.1 Protein Homology CDS 113976 116425 . + 0 ID=cds-AD853_RS22405;Parent=gene-AD853_RS22405;Note=frameshifted;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209245.1;locus_tag=AD853_RS22405;product=GNAT family N-acetyltransferase;pseudo=true;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 116504 117883 . - . ID=gene-AD853_RS00475;Name=AD853_RS00475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS00475;old_locus_tag=ERS008462_00095 NZ_CPUY01000001.1 Protein Homology CDS 116504 117883 . - 0 ID=cds-WP_012105700.1;Parent=gene-AD853_RS00475;Dbxref=GenBank:WP_012105700.1;Name=WP_012105700.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011191697.1;locus_tag=AD853_RS00475;product=MFS transporter;protein_id=WP_012105700.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 118011 118598 . - . ID=gene-AD853_RS00480;Name=mog;gbkey=Gene;gene=mog;gene_biotype=protein_coding;locus_tag=AD853_RS00480;old_locus_tag=ERS008462_00096 NZ_CPUY01000001.1 Protein Homology CDS 118011 118598 . - 0 ID=cds-WP_002209243.1;Parent=gene-AD853_RS00480;Dbxref=GenBank:WP_002209243.1;Name=WP_002209243.1;Ontology_term=GO:0006777;gbkey=CDS;gene=mog;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308036.1;locus_tag=AD853_RS00480;product=molybdopterin adenylyltransferase;protein_id=WP_002209243.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 118886 119839 . - . ID=gene-AD853_RS00485;Name=tal;gbkey=Gene;gene=tal;gene_biotype=protein_coding;locus_tag=AD853_RS00485;old_locus_tag=ERS008462_00097 NZ_CPUY01000001.1 Protein Homology CDS 118886 119839 . - 0 ID=cds-WP_002209241.1;Parent=gene-AD853_RS00485;Dbxref=GenBank:WP_002209241.1;Name=WP_002209241.1;Ontology_term=GO:0006098,GO:0004801,GO:0005737;gbkey=CDS;gene=tal;go_component=cytoplasm|0005737||IEA;go_function=transaldolase activity|0004801||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017457867.1;locus_tag=AD853_RS00485;product=transaldolase;protein_id=WP_002209241.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 119906 120088 . - . ID=gene-AD853_RS20080;Name=AD853_RS20080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS20080 NZ_CPUY01000001.1 Protein Homology CDS 119906 120088 . - 0 ID=cds-WP_071820229.1;Parent=gene-AD853_RS20080;Dbxref=GenBank:WP_071820229.1;Name=WP_071820229.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002216008.1;locus_tag=AD853_RS20080;product=hypothetical protein;protein_id=WP_071820229.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 120371 121147 . + . ID=gene-AD853_RS00490;Name=yaaA;gbkey=Gene;gene=yaaA;gene_biotype=protein_coding;locus_tag=AD853_RS00490;old_locus_tag=ERS008462_00098 NZ_CPUY01000001.1 Protein Homology CDS 120371 121147 . + 0 ID=cds-WP_002209240.1;Parent=gene-AD853_RS00490;Dbxref=GenBank:WP_002209240.1;Name=WP_002209240.1;gbkey=CDS;gene=yaaA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209240.1;locus_tag=AD853_RS00490;product=peroxide stress protein YaaA;protein_id=WP_002209240.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 121964 123253 . - . ID=gene-AD853_RS00495;Name=thrC;gbkey=Gene;gene=thrC;gene_biotype=protein_coding;locus_tag=AD853_RS00495;old_locus_tag=ERS008462_00100 NZ_CPUY01000001.1 Protein Homology CDS 121964 123253 . - 0 ID=cds-WP_002209239.1;Parent=gene-AD853_RS00495;Dbxref=GenBank:WP_002209239.1;Name=WP_002209239.1;Ontology_term=GO:0009088,GO:0004795;gbkey=CDS;gene=thrC;go_function=threonine synthase activity|0004795||IEA;go_process=threonine biosynthetic process|0009088||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005159027.1;locus_tag=AD853_RS00495;product=threonine synthase;protein_id=WP_002209239.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 123257 124186 . - . ID=gene-AD853_RS00500;Name=thrB;gbkey=Gene;gene=thrB;gene_biotype=protein_coding;locus_tag=AD853_RS00500;old_locus_tag=ERS008462_00101 NZ_CPUY01000001.1 Protein Homology CDS 123257 124186 . - 0 ID=cds-WP_002209238.1;Parent=gene-AD853_RS00500;Dbxref=GenBank:WP_002209238.1;Name=WP_002209238.1;Ontology_term=GO:0009088,GO:0004413,GO:0005524;gbkey=CDS;gene=thrB;go_function=homoserine kinase activity|0004413||IEA,ATP binding|0005524||IEA;go_process=threonine biosynthetic process|0009088||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004715920.1;locus_tag=AD853_RS00500;product=homoserine kinase;protein_id=WP_002209238.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 124189 126648 . - . ID=gene-AD853_RS00505;Name=thrA;gbkey=Gene;gene=thrA;gene_biotype=protein_coding;locus_tag=AD853_RS00505;old_locus_tag=ERS008462_00102 NZ_CPUY01000001.1 Protein Homology CDS 124189 126648 . - 0 ID=cds-WP_012105703.1;Parent=gene-AD853_RS00505;Dbxref=GenBank:WP_012105703.1;Name=WP_012105703.1;Ontology_term=GO:0008652,GO:0009067,GO:0004072,GO:0004412,GO:0050661;gbkey=CDS;gene=thrA;go_function=aspartate kinase activity|0004072||IEA,homoserine dehydrogenase activity|0004412||IEA,NADP binding|0050661||IEA;go_process=amino acid biosynthetic process|0008652||IEA,aspartate family amino acid biosynthetic process|0009067||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124053.1;locus_tag=AD853_RS00505;product=bifunctional aspartate kinase/homoserine dehydrogenase I;protein_id=WP_012105703.1;transl_table=11 NZ_CPUY01000001.1 cmsearch sequence_feature 126710 126828 . - . ID=id-NZ_CPUY01000001.1:126710..126828;Dbxref=RFAM:RF00506;Note=Thr leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.5 NZ_CPUY01000001.1 RefSeq gene 126767 126853 . - . ID=gene-AD853_RS20085;Name=thrL;gbkey=Gene;gene=thrL;gene_biotype=protein_coding;locus_tag=AD853_RS20085 NZ_CPUY01000001.1 Protein Homology CDS 126767 126853 . - 0 ID=cds-WP_011055790.1;Parent=gene-AD853_RS20085;Dbxref=GenBank:WP_011055790.1;Name=WP_011055790.1;Ontology_term=GO:0009088,GO:0031554,GO:0031556;gbkey=CDS;gene=thrL;go_process=threonine biosynthetic process|0009088||IEA,regulation of termination of DNA-templated transcription|0031554||IEA,transcriptional attenuation by ribosome|0031556||IEA;inference=COORDINATES: protein motif:HMM:TIGR02077.1;locus_tag=AD853_RS20085;product=thr operon leader peptide;protein_id=WP_011055790.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 127509 127649 . - . ID=gene-AD853_RS21945;Name=yjjY;gbkey=Gene;gene=yjjY;gene_biotype=protein_coding;locus_tag=AD853_RS21945 NZ_CPUY01000001.1 Protein Homology CDS 127509 127649 . - 0 ID=cds-WP_002231506.1;Parent=gene-AD853_RS21945;Dbxref=GenBank:WP_002231506.1;Name=WP_002231506.1;gbkey=CDS;gene=yjjY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002231506.1;locus_tag=AD853_RS21945;product=YjjY family protein;protein_id=WP_002231506.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 127752 128468 . + . ID=gene-AD853_RS00510;Name=arcA;gbkey=Gene;gene=arcA;gene_biotype=protein_coding;locus_tag=AD853_RS00510;old_locus_tag=ERS008462_00105 NZ_CPUY01000001.1 Protein Homology CDS 127752 128468 . + 0 ID=cds-WP_002209234.1;Parent=gene-AD853_RS00510;Dbxref=GenBank:WP_002209234.1;Name=WP_002209234.1;gbkey=CDS;gene=arcA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225009.1;locus_tag=AD853_RS00510;product=two-component system response regulator ArcA;protein_id=WP_002209234.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 128642 129109 . - . ID=gene-AD853_RS00515;Name=creA;gbkey=Gene;gene=creA;gene_biotype=protein_coding;locus_tag=AD853_RS00515;old_locus_tag=ERS008462_00106 NZ_CPUY01000001.1 Protein Homology CDS 128642 129109 . - 0 ID=cds-WP_002209232.1;Parent=gene-AD853_RS00515;Dbxref=GenBank:WP_002209232.1;Name=WP_002209232.1;gbkey=CDS;gene=creA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209232.1;locus_tag=AD853_RS00515;product=protein CreA;protein_id=WP_002209232.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 129335 130201 . + . ID=gene-AD853_RS00520;Name=robA;gbkey=Gene;gene=robA;gene_biotype=protein_coding;locus_tag=AD853_RS00520;old_locus_tag=ERS008462_00108 NZ_CPUY01000001.1 Protein Homology CDS 129335 130201 . + 0 ID=cds-WP_002209231.1;Parent=gene-AD853_RS00520;Dbxref=GenBank:WP_002209231.1;Name=WP_002209231.1;gbkey=CDS;gene=robA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019080567.1;locus_tag=AD853_RS00520;product=MDR efflux pump AcrAB transcriptional activator RobA;protein_id=WP_002209231.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 130198 130845 . - . ID=gene-AD853_RS00525;Name=gpmB;gbkey=Gene;gene=gpmB;gene_biotype=protein_coding;locus_tag=AD853_RS00525;old_locus_tag=ERS008462_00109 NZ_CPUY01000001.1 Protein Homology CDS 130198 130845 . - 0 ID=cds-WP_002209230.1;Parent=gene-AD853_RS00525;Dbxref=GenBank:WP_002209230.1;Name=WP_002209230.1;Ontology_term=GO:0006096,GO:0004619;gbkey=CDS;gene=gpmB;go_function=phosphoglycerate mutase activity|0004619||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225003.1;locus_tag=AD853_RS00525;product=2%2C3-diphosphoglycerate-dependent phosphoglycerate mutase GpmB;protein_id=WP_002209230.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 130939 131481 . + . ID=gene-AD853_RS00530;Name=yjjX;gbkey=Gene;gene=yjjX;gene_biotype=protein_coding;locus_tag=AD853_RS00530;old_locus_tag=ERS008462_00110 NZ_CPUY01000001.1 Protein Homology CDS 130939 131481 . + 0 ID=cds-WP_011191695.1;Parent=gene-AD853_RS00530;Dbxref=GenBank:WP_011191695.1;Name=WP_011191695.1;gbkey=CDS;gene=yjjX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105705.1;locus_tag=AD853_RS00530;product=inosine/xanthosine triphosphatase;protein_id=WP_011191695.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 131478 131870 . - . ID=gene-AD853_RS00535;Name=trpR;gbkey=Gene;gene=trpR;gene_biotype=protein_coding;locus_tag=AD853_RS00535;old_locus_tag=ERS008462_00111 NZ_CPUY01000001.1 Protein Homology CDS 131478 131870 . - 0 ID=cds-WP_002209228.1;Parent=gene-AD853_RS00535;Dbxref=GenBank:WP_002209228.1;Name=WP_002209228.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;gene=trpR;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105706.1;locus_tag=AD853_RS00535;product=trp operon repressor;protein_id=WP_002209228.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 132107 134026 . - . ID=gene-AD853_RS00540;Name=sltY;gbkey=Gene;gene=sltY;gene_biotype=protein_coding;locus_tag=AD853_RS00540;old_locus_tag=ERS008462_00112 NZ_CPUY01000001.1 Protein Homology CDS 132107 134026 . - 0 ID=cds-WP_011191694.1;Parent=gene-AD853_RS00540;Dbxref=GenBank:WP_011191694.1;Name=WP_011191694.1;Ontology_term=GO:0000270,GO:0004553,GO:0008933,GO:0016020,GO:0042597;gbkey=CDS;gene=sltY;go_component=membrane|0016020||IEA,periplasmic space|0042597||IEA;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA,peptidoglycan lytic transglycosylase activity|0008933||IEA;go_process=peptidoglycan metabolic process|0000270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209227.1;locus_tag=AD853_RS00540;product=murein transglycosylase;protein_id=WP_011191694.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 134596 137322 . + . ID=gene-AD853_RS00545;Name=AD853_RS00545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS00545;old_locus_tag=ERS008462_00113 NZ_CPUY01000001.1 Protein Homology CDS 134596 137322 . + 0 ID=cds-WP_011191693.1;Parent=gene-AD853_RS00545;Dbxref=GenBank:WP_011191693.1;Name=WP_011191693.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209226.1;locus_tag=AD853_RS00545;product=cation-transporting P-type ATPase;protein_id=WP_011191693.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 137697 138320 . + . ID=gene-AD853_RS00550;Name=AD853_RS00550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS00550;old_locus_tag=ERS008462_00114 NZ_CPUY01000001.1 Protein Homology CDS 137697 138320 . + 0 ID=cds-WP_002209225.1;Parent=gene-AD853_RS00550;Dbxref=GenBank:WP_002209225.1;Name=WP_002209225.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209225.1;locus_tag=AD853_RS00550;product=regulatory sequestration protein YfiR;protein_id=WP_002209225.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 138317 139618 . + . ID=gene-AD853_RS00555;Name=AD853_RS00555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS00555;old_locus_tag=ERS008462_00115 NZ_CPUY01000001.1 Protein Homology CDS 138317 139618 . + 0 ID=cds-WP_002209224.1;Parent=gene-AD853_RS00555;Dbxref=GenBank:WP_002209224.1;Name=WP_002209224.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209224.1;locus_tag=AD853_RS00555;product=diguanylate cyclase DgcN/YfiN;protein_id=WP_002209224.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 139624 140130 . + . ID=gene-AD853_RS00560;Name=AD853_RS00560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS00560;old_locus_tag=ERS008462_00116 NZ_CPUY01000001.1 Protein Homology CDS 139624 140130 . + 0 ID=cds-WP_002215967.1;Parent=gene-AD853_RS00560;Dbxref=GenBank:WP_002215967.1;Name=WP_002215967.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011191692.1;locus_tag=AD853_RS00560;product=outer membrane lipoprotein YfiB;protein_id=WP_002215967.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 140313 141980 . + . ID=gene-AD853_RS00565;Name=ettA;gbkey=Gene;gene=ettA;gene_biotype=protein_coding;locus_tag=AD853_RS00565;old_locus_tag=ERS008462_00117 NZ_CPUY01000001.1 Protein Homology CDS 140313 141980 . + 0 ID=cds-WP_011191691.1;Parent=gene-AD853_RS00565;Dbxref=GenBank:WP_011191691.1;Name=WP_011191691.1;Ontology_term=GO:0045900,GO:0005524;gbkey=CDS;gene=ettA;go_function=ATP binding|0005524||IEA;go_process=negative regulation of translational elongation|0045900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313376.1;locus_tag=AD853_RS00565;product=energy-dependent translational throttle protein EttA;protein_id=WP_011191691.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 142126 143256 . - . ID=gene-AD853_RS00570;Name=AD853_RS00570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS00570;old_locus_tag=ERS008462_00118 NZ_CPUY01000001.1 Protein Homology CDS 142126 143256 . - 0 ID=cds-WP_011191690.1;Parent=gene-AD853_RS00570;Dbxref=GenBank:WP_011191690.1;Name=WP_011191690.1;Ontology_term=GO:0000287,GO:0005524,GO:0042803;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,ATP binding|0005524||IEA,protein homodimerization activity|0042803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002218755.1;locus_tag=AD853_RS00570;product=Fic family protein;protein_id=WP_011191690.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 143413 144684 . - . ID=gene-AD853_RS00575;Name=nadR;gbkey=Gene;gene=nadR;gene_biotype=protein_coding;locus_tag=AD853_RS00575;old_locus_tag=ERS008462_00119 NZ_CPUY01000001.1 Protein Homology CDS 143413 144684 . - 0 ID=cds-WP_002209221.1;Parent=gene-AD853_RS00575;Dbxref=GenBank:WP_002209221.1;Name=WP_002209221.1;Ontology_term=GO:0009058,GO:0000309,GO:0003677,GO:0050262;gbkey=CDS;gene=nadR;go_function=nicotinamide-nucleotide adenylyltransferase activity|0000309||IEA,DNA binding|0003677||IEA,ribosylnicotinamide kinase activity|0050262||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105707.1;locus_tag=AD853_RS00575;product=multifunctional transcriptional regulator/nicotinamide-nucleotide adenylyltransferase/ribosylnicotinamide kinase NadR;protein_id=WP_002209221.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 144843 146225 . - . ID=gene-AD853_RS00580;Name=radA;gbkey=Gene;gene=radA;gene_biotype=protein_coding;locus_tag=AD853_RS00580;old_locus_tag=ERS008462_00120 NZ_CPUY01000001.1 Protein Homology CDS 144843 146225 . - 0 ID=cds-WP_002209220.1;Parent=gene-AD853_RS00580;Dbxref=GenBank:WP_002209220.1;Name=WP_002209220.1;Ontology_term=GO:0006281,GO:0003684,GO:0005524;gbkey=CDS;gene=radA;go_function=damaged DNA binding|0003684||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463435.1;locus_tag=AD853_RS00580;product=DNA repair protein RadA;protein_id=WP_002209220.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 146344 147324 . - . ID=gene-AD853_RS00585;Name=serB;gbkey=Gene;gene=serB;gene_biotype=protein_coding;locus_tag=AD853_RS00585;old_locus_tag=ERS008462_00121 NZ_CPUY01000001.1 Protein Homology CDS 146344 147324 . - 0 ID=cds-WP_038824108.1;Parent=gene-AD853_RS00585;Dbxref=GenBank:WP_038824108.1;Name=WP_038824108.1;Ontology_term=GO:0006564,GO:0036424;gbkey=CDS;gene=serB;go_function=L-phosphoserine phosphatase activity|0036424||IEA;go_process=L-serine biosynthetic process|0006564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304614.1;locus_tag=AD853_RS00585;product=phosphoserine phosphatase;protein_id=WP_038824108.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 147556 148257 . + . ID=gene-AD853_RS00590;Name=AD853_RS00590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS00590;old_locus_tag=ERS008462_00122 NZ_CPUY01000001.1 Protein Homology CDS 147556 148257 . + 0 ID=cds-WP_002209218.1;Parent=gene-AD853_RS00590;Dbxref=GenBank:WP_002209218.1;Name=WP_002209218.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209218.1;locus_tag=AD853_RS00590;product=YtjB family periplasmic protein;protein_id=WP_002209218.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 148369 149088 . - . ID=gene-AD853_RS00595;Name=deoD;gbkey=Gene;gene=deoD;gene_biotype=protein_coding;locus_tag=AD853_RS00595;old_locus_tag=ERS008462_00123 NZ_CPUY01000001.1 Protein Homology CDS 148369 149088 . - 0 ID=cds-WP_011191689.1;Parent=gene-AD853_RS00595;Dbxref=GenBank:WP_011191689.1;Name=WP_011191689.1;Ontology_term=GO:0006139,GO:0004731;gbkey=CDS;gene=deoD;go_function=purine-nucleoside phosphorylase activity|0004731||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209217.1;locus_tag=AD853_RS00595;product=purine-nucleoside phosphorylase;protein_id=WP_011191689.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 149213 150436 . - . ID=gene-AD853_RS00600;Name=deoB;gbkey=Gene;gene=deoB;gene_biotype=protein_coding;locus_tag=AD853_RS00600;old_locus_tag=ERS008462_00124 NZ_CPUY01000001.1 Protein Homology CDS 149213 150436 . - 0 ID=cds-WP_011191688.1;Parent=gene-AD853_RS00600;Dbxref=GenBank:WP_011191688.1;Name=WP_011191688.1;Ontology_term=GO:0009117,GO:0043094,GO:0000287,GO:0008973,GO:0005737;gbkey=CDS;gene=deoB;go_component=cytoplasm|0005737||IEA;go_function=magnesium ion binding|0000287||IEA,phosphopentomutase activity|0008973||IEA;go_process=nucleotide metabolic process|0009117||IEA,metabolic compound salvage|0043094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011191688.1;locus_tag=AD853_RS00600;product=phosphopentomutase;protein_id=WP_011191688.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 150568 151890 . - . ID=gene-AD853_RS00605;Name=deoA;gbkey=Gene;gene=deoA;gene_biotype=protein_coding;locus_tag=AD853_RS00605;old_locus_tag=ERS008462_00125 NZ_CPUY01000001.1 Protein Homology CDS 150568 151890 . - 0 ID=cds-WP_011191687.1;Parent=gene-AD853_RS00605;Dbxref=GenBank:WP_011191687.1;Name=WP_011191687.1;Ontology_term=GO:0006213,GO:0009032;gbkey=CDS;gene=deoA;go_function=thymidine phosphorylase activity|0009032||IEA;go_process=pyrimidine nucleoside metabolic process|0006213||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019454991.1;locus_tag=AD853_RS00605;product=thymidine phosphorylase;protein_id=WP_011191687.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 152011 152808 . - . ID=gene-AD853_RS00610;Name=deoC;gbkey=Gene;gene=deoC;gene_biotype=protein_coding;locus_tag=AD853_RS00610;old_locus_tag=ERS008462_00126 NZ_CPUY01000001.1 Protein Homology CDS 152011 152808 . - 0 ID=cds-WP_038824104.1;Parent=gene-AD853_RS00610;Dbxref=GenBank:WP_038824104.1;Name=WP_038824104.1;Ontology_term=GO:0009264,GO:0004139,GO:0005737;gbkey=CDS;gene=deoC;go_component=cytoplasm|0005737||IEA;go_function=deoxyribose-phosphate aldolase activity|0004139||IEA;go_process=deoxyribonucleotide catabolic process|0009264||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004716349.1;locus_tag=AD853_RS00610;product=deoxyribose-phosphate aldolase;protein_id=WP_038824104.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 153429 154700 . - . ID=gene-AD853_RS00615;Name=AD853_RS00615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS00615;old_locus_tag=ERS008462_00127 NZ_CPUY01000001.1 Protein Homology CDS 153429 154700 . - 0 ID=cds-WP_011191686.1;Parent=gene-AD853_RS00615;Dbxref=GenBank:WP_011191686.1;Name=WP_011191686.1;Ontology_term=GO:1901642,GO:0005337,GO:0015293,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=nucleoside transmembrane transporter activity|0005337||IEA,symporter activity|0015293||IEA;go_process=nucleoside transmembrane transport|1901642||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019084018.1;locus_tag=AD853_RS00615;product=NupC/NupG family nucleoside CNT transporter;protein_id=WP_011191686.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 155235 156023 . - . ID=gene-AD853_RS00620;Name=AD853_RS00620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS00620;old_locus_tag=ERS008462_00128 NZ_CPUY01000001.1 Protein Homology CDS 155235 156023 . - 0 ID=cds-WP_011191685.1;Parent=gene-AD853_RS00620;Dbxref=GenBank:WP_011191685.1;Name=WP_011191685.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002228116.1;locus_tag=AD853_RS00620;product=metal-dependent hydrolase;protein_id=WP_011191685.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 156060 157331 . - . ID=gene-AD853_RS00625;Name=AD853_RS00625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS00625;old_locus_tag=ERS008462_00129 NZ_CPUY01000001.1 Protein Homology CDS 156060 157331 . - 0 ID=cds-WP_002216076.1;Parent=gene-AD853_RS00625;Dbxref=GenBank:WP_002216076.1;Name=WP_002216076.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016583114.1;locus_tag=AD853_RS00625;product=patatin-like phospholipase family protein;protein_id=WP_002216076.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 157405 157566 . - . ID=gene-AD853_RS00630;Name=AD853_RS00630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS00630;old_locus_tag=ERS008462_00130 NZ_CPUY01000001.1 Protein Homology CDS 157405 157566 . - 0 ID=cds-WP_011191683.1;Parent=gene-AD853_RS00630;Dbxref=GenBank:WP_011191683.1;Name=WP_011191683.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011191683.1;locus_tag=AD853_RS00630;product=DUF1328 domain-containing protein;protein_id=WP_011191683.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 157733 158347 . - . ID=gene-AD853_RS00635;Name=osmY;gbkey=Gene;gene=osmY;gene_biotype=protein_coding;locus_tag=AD853_RS00635;old_locus_tag=ERS008462_00131 NZ_CPUY01000001.1 Protein Homology CDS 157733 158347 . - 0 ID=cds-WP_011191682.1;Parent=gene-AD853_RS00635;Dbxref=GenBank:WP_011191682.1;Name=WP_011191682.1;gbkey=CDS;gene=osmY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011906422.1;locus_tag=AD853_RS00635;product=molecular chaperone OsmY;protein_id=WP_011191682.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 158675 160264 . - . ID=gene-AD853_RS00640;Name=prfC;gbkey=Gene;gene=prfC;gene_biotype=protein_coding;locus_tag=AD853_RS00640;old_locus_tag=ERS008462_00132 NZ_CPUY01000001.1 Protein Homology CDS 158675 160264 . - 0 ID=cds-WP_011191681.1;Parent=gene-AD853_RS00640;Dbxref=GenBank:WP_011191681.1;Name=WP_011191681.1;Ontology_term=GO:0006415,GO:0003747,GO:0003924,GO:0005525;gbkey=CDS;gene=prfC;go_function=translation release factor activity|0003747||IEA,GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019080589.1;locus_tag=AD853_RS00640;product=peptide chain release factor 3;protein_id=WP_011191681.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 160442 160885 . - . ID=gene-AD853_RS00645;Name=rimI;gbkey=Gene;gene=rimI;gene_biotype=protein_coding;locus_tag=AD853_RS00645;old_locus_tag=ERS008462_00133 NZ_CPUY01000001.1 Protein Homology CDS 160442 160885 . - 0 ID=cds-WP_002216075.1;Parent=gene-AD853_RS00645;Dbxref=GenBank:WP_002216075.1;Name=WP_002216075.1;Ontology_term=GO:0006474,GO:0008080;gbkey=CDS;gene=rimI;go_function=N-acetyltransferase activity|0008080||IEA;go_process=N-terminal protein amino acid acetylation|0006474||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002216075.1;locus_tag=AD853_RS00645;product=ribosomal protein S18-alanine N-acetyltransferase;protein_id=WP_002216075.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 160830 161267 . - . ID=gene-AD853_RS00650;Name=AD853_RS00650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS00650;old_locus_tag=ERS008462_00134 NZ_CPUY01000001.1 Protein Homology CDS 160830 161267 . - 0 ID=cds-WP_011191680.1;Parent=gene-AD853_RS00650;Dbxref=GenBank:WP_011191680.1;Name=WP_011191680.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209207.1;locus_tag=AD853_RS00650;product=DNA polymerase III subunit psi;protein_id=WP_011191680.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 161380 162423 . + . ID=gene-AD853_RS00655;Name=rsmC;gbkey=Gene;gene=rsmC;gene_biotype=protein_coding;locus_tag=AD853_RS00655;old_locus_tag=ERS008462_00135 NZ_CPUY01000001.1 Protein Homology CDS 161380 162423 . + 0 ID=cds-WP_002209206.1;Parent=gene-AD853_RS00655;Dbxref=GenBank:WP_002209206.1;Name=WP_002209206.1;Ontology_term=GO:0006364,GO:0003676,GO:0008990;gbkey=CDS;gene=rsmC;go_function=nucleic acid binding|0003676||IEA,rRNA (guanine-N2-)-methyltransferase activity|0008990||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011815514.1;locus_tag=AD853_RS00655;product=16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC;protein_id=WP_002209206.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 162680 162766 . + . ID=gene-AD853_RS00660;Name=AD853_RS00660;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD853_RS00660;old_locus_tag=ERS008462_00136 NZ_CPUY01000001.1 tRNAscan-SE tRNA 162680 162766 . + . ID=rna-AD853_RS00660;Parent=gene-AD853_RS00660;anticodon=(pos:162714..162716);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD853_RS00660;product=tRNA-Leu NZ_CPUY01000001.1 tRNAscan-SE exon 162680 162766 . + . ID=exon-AD853_RS00660-1;Parent=rna-AD853_RS00660;anticodon=(pos:162714..162716);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD853_RS00660;product=tRNA-Leu NZ_CPUY01000001.1 RefSeq gene 162936 163268 . - . ID=gene-AD853_RS00665;Name=AD853_RS00665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS00665;old_locus_tag=ERS008462_00137 NZ_CPUY01000001.1 Protein Homology CDS 162936 163268 . - 0 ID=cds-WP_012413464.1;Parent=gene-AD853_RS00665;Dbxref=GenBank:WP_012413464.1;Name=WP_012413464.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002215232.1;locus_tag=AD853_RS00665;product=DUF1435 domain-containing protein;protein_id=WP_012413464.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 163517 164671 . + . ID=gene-AD853_RS00670;Name=AD853_RS00670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS00670;old_locus_tag=ERS008462_00138 NZ_CPUY01000001.1 Protein Homology CDS 163517 164671 . + 0 ID=cds-WP_050124547.1;Parent=gene-AD853_RS00670;Dbxref=GenBank:WP_050124547.1;Name=WP_050124547.1;Ontology_term=GO:0005525,GO:0046872,GO:0052621,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=GTP binding|0005525||IEA,metal ion binding|0046872||IEA,diguanylate cyclase activity|0052621||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011906423.1;locus_tag=AD853_RS00670;product=GGDEF domain-containing protein;protein_id=WP_050124547.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 165230 166315 . - . ID=gene-AD853_RS00675;Name=AD853_RS00675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS00675;old_locus_tag=ERS008462_00139 NZ_CPUY01000001.1 Protein Homology CDS 165230 166315 . - 0 ID=cds-WP_002209202.1;Parent=gene-AD853_RS00675;Dbxref=GenBank:WP_002209202.1;Name=WP_002209202.1;Ontology_term=GO:0042545,GO:0030599;gbkey=CDS;go_function=pectinesterase activity|0030599||IEA;go_process=cell wall modification|0042545||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105712.1;locus_tag=AD853_RS00675;product=pectinesterase family protein;protein_id=WP_002209202.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 166633 166971 . + . ID=gene-AD853_RS00680;Name=AD853_RS00680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS00680 NZ_CPUY01000001.1 Protein Homology CDS 166633 166971 . + 0 ID=cds-WP_002215230.1;Parent=gene-AD853_RS00680;Dbxref=GenBank:WP_002215230.1;Name=WP_002215230.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002215230.1;locus_tag=AD853_RS00680;product=hypothetical protein;protein_id=WP_002215230.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 167154 167450 . + . ID=gene-AD853_RS00685;Name=AD853_RS00685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS00685;old_locus_tag=ERS008462_00140 NZ_CPUY01000001.1 Protein Homology CDS 167154 167450 . + 0 ID=cds-WP_002209201.1;Parent=gene-AD853_RS00685;Dbxref=GenBank:WP_002209201.1;Name=WP_002209201.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209201.1;locus_tag=AD853_RS00685;product=hypothetical protein;protein_id=WP_002209201.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 167792 170905 . - . ID=gene-AD853_RS00695;Name=AD853_RS00695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS00695;old_locus_tag=ERS008462_00141 NZ_CPUY01000001.1 Protein Homology CDS 167792 170905 . - 0 ID=cds-WP_038824286.1;Parent=gene-AD853_RS00695;Dbxref=GenBank:WP_038824286.1;Name=WP_038824286.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209200.1;locus_tag=AD853_RS00695;product=efflux RND transporter permease subunit;protein_id=WP_038824286.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 170905 171987 . - . ID=gene-AD853_RS00700;Name=AD853_RS00700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS00700;old_locus_tag=ERS008462_00142 NZ_CPUY01000001.1 Protein Homology CDS 170905 171987 . - 0 ID=cds-WP_038824287.1;Parent=gene-AD853_RS00700;Dbxref=GenBank:WP_038824287.1;Name=WP_038824287.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005159139.1;locus_tag=AD853_RS00700;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_038824287.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 172039 172272 . - . ID=gene-AD853_RS00705;Name=AD853_RS00705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS00705;old_locus_tag=ERS008462_00143 NZ_CPUY01000001.1 Protein Homology CDS 172039 172272 . - 0 ID=cds-WP_002209198.1;Parent=gene-AD853_RS00705;Dbxref=GenBank:WP_002209198.1;Name=WP_002209198.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209198.1;locus_tag=AD853_RS00705;product=lipopolysaccharide assembly protein LapA domain-containing protein;protein_id=WP_002209198.1;transl_table=11 NZ_CPUY01000001.1 RefSeq pseudogene 173009 173233 . + . ID=gene-AD853_RS21950;Name=AD853_RS21950;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD853_RS21950;partial=true;pseudo=true;start_range=.,173009 NZ_CPUY01000001.1 Protein Homology CDS 173009 173233 . + 0 ID=cds-AD853_RS21950;Parent=gene-AD853_RS21950;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000950586.1;locus_tag=AD853_RS21950;partial=true;product=transposase;pseudo=true;start_range=.,173009;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 173412 174638 . - . ID=gene-AD853_RS00715;Name=AD853_RS00715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS00715;old_locus_tag=ERS008462_00144 NZ_CPUY01000001.1 Protein Homology CDS 173412 174638 . - 0 ID=cds-WP_011191673.1;Parent=gene-AD853_RS00715;Dbxref=GenBank:WP_011191673.1;Name=WP_011191673.1;Ontology_term=GO:0008641;gbkey=CDS;go_function=ubiquitin-like modifier activating enzyme activity|0008641||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011191673.1;locus_tag=AD853_RS00715;product=ThiF family adenylyltransferase;protein_id=WP_011191673.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 174671 175411 . - . ID=gene-AD853_RS00720;Name=AD853_RS00720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS00720;old_locus_tag=ERS008462_00145 NZ_CPUY01000001.1 GeneMarkS-2+ CDS 174671 175411 . - 0 ID=cds-WP_230674862.1;Parent=gene-AD853_RS00720;Dbxref=GenBank:WP_230674862.1;Name=WP_230674862.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AD853_RS00720;product=hypothetical protein;protein_id=WP_230674862.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 175509 175784 . - . ID=gene-AD853_RS00725;Name=AD853_RS00725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS00725;old_locus_tag=ERS008462_00146 NZ_CPUY01000001.1 Protein Homology CDS 175509 175784 . - 0 ID=cds-WP_011191671.1;Parent=gene-AD853_RS00725;Dbxref=GenBank:WP_011191671.1;Name=WP_011191671.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011191671.1;locus_tag=AD853_RS00725;product=MoaD/ThiS family protein;protein_id=WP_011191671.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 175786 176805 . - . ID=gene-AD853_RS00730;Name=AD853_RS00730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS00730;old_locus_tag=ERS008462_00147 NZ_CPUY01000001.1 Protein Homology CDS 175786 176805 . - 0 ID=cds-WP_050124548.1;Parent=gene-AD853_RS00730;Dbxref=GenBank:WP_050124548.1;Name=WP_050124548.1;Ontology_term=GO:0003995,GO:0050660;gbkey=CDS;go_function=acyl-CoA dehydrogenase activity|0003995||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: protein motif:HMM:NF012656.6;locus_tag=AD853_RS00730;product=acyl-CoA dehydrogenase family protein;protein_id=WP_050124548.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 176780 177919 . - . ID=gene-AD853_RS00735;Name=AD853_RS00735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS00735;old_locus_tag=ERS008462_00148 NZ_CPUY01000001.1 Protein Homology CDS 176780 177919 . - 0 ID=cds-WP_223847744.1;Parent=gene-AD853_RS00735;Dbxref=GenBank:WP_223847744.1;Name=WP_223847744.1;Ontology_term=GO:0006534,GO:0016226,GO:0030170,GO:0031071;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA,cysteine desulfurase activity|0031071||IEA;go_process=cysteine metabolic process|0006534||IEA,iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012413461.1;locus_tag=AD853_RS00735;product=aminotransferase class V-fold PLP-dependent enzyme;protein_id=WP_223847744.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 178285 179511 . - . ID=gene-AD853_RS00740;Name=AD853_RS00740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS00740;old_locus_tag=ERS008462_00149 NZ_CPUY01000001.1 Protein Homology CDS 178285 179511 . - 0 ID=cds-WP_011191668.1;Parent=gene-AD853_RS00740;Dbxref=GenBank:WP_011191668.1;Name=WP_011191668.1;Ontology_term=GO:0009103,GO:0008754,GO:0008755,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=O-antigen ligase activity|0008754||IEA,O antigen polymerase activity|0008755||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012413460.1;locus_tag=AD853_RS00740;product=O-antigen ligase family protein;protein_id=WP_011191668.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 179559 180722 . - . ID=gene-AD853_RS00745;Name=rfaQ;gbkey=Gene;gene=rfaQ;gene_biotype=protein_coding;locus_tag=AD853_RS00745;old_locus_tag=ERS008462_00150 NZ_CPUY01000001.1 Protein Homology CDS 179559 180722 . - 0 ID=cds-WP_038824289.1;Parent=gene-AD853_RS00745;Dbxref=GenBank:WP_038824289.1;Name=WP_038824289.1;Ontology_term=GO:0016757;gbkey=CDS;gene=rfaQ;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209196.1;locus_tag=AD853_RS00745;product=putative lipopolysaccharide heptosyltransferase III;protein_id=WP_038824289.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 181053 182645 . - . ID=gene-AD853_RS00750;Name=lsrK;gbkey=Gene;gene=lsrK;gene_biotype=protein_coding;locus_tag=AD853_RS00750;old_locus_tag=ERS008462_00151 NZ_CPUY01000001.1 Protein Homology CDS 181053 182645 . - 0 ID=cds-WP_002230543.1;Parent=gene-AD853_RS00750;Dbxref=GenBank:WP_002230543.1;Name=WP_002230543.1;Ontology_term=GO:0005975,GO:0009372,GO:0071518;gbkey=CDS;gene=lsrK;go_function=autoinducer-2 kinase activity|0071518||IEA;go_process=carbohydrate metabolic process|0005975||IEA,quorum sensing|0009372||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209194.1;locus_tag=AD853_RS00750;product=autoinducer-2 kinase;protein_id=WP_002230543.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 182816 183811 . - . ID=gene-AD853_RS00755;Name=lsrR;gbkey=Gene;gene=lsrR;gene_biotype=protein_coding;locus_tag=AD853_RS00755;old_locus_tag=ERS008462_00152 NZ_CPUY01000001.1 Protein Homology CDS 182816 183811 . - 0 ID=cds-WP_038824290.1;Parent=gene-AD853_RS00755;Dbxref=GenBank:WP_038824290.1;Name=WP_038824290.1;gbkey=CDS;gene=lsrR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019080622.1;locus_tag=AD853_RS00755;product=transcriptional regulator LsrR;protein_id=WP_038824290.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 183818 184012 . + . ID=gene-AD853_RS00760;Name=AD853_RS00760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS00760 NZ_CPUY01000001.1 Protein Homology CDS 183818 184012 . + 0 ID=cds-WP_038824291.1;Parent=gene-AD853_RS00760;Dbxref=GenBank:WP_038824291.1;Name=WP_038824291.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002221620.1;locus_tag=AD853_RS00760;product=hypothetical protein;protein_id=WP_038824291.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 184122 185705 . + . ID=gene-AD853_RS00765;Name=lsrA;gbkey=Gene;gene=lsrA;gene_biotype=protein_coding;locus_tag=AD853_RS00765;old_locus_tag=ERS008462_00153 NZ_CPUY01000001.1 Protein Homology CDS 184122 185705 . + 0 ID=cds-WP_038824293.1;Parent=gene-AD853_RS00765;Dbxref=GenBank:WP_038824293.1;Name=WP_038824293.1;Ontology_term=GO:1905887,GO:0005524,GO:0042626,GO:0016020;gbkey=CDS;gene=lsrA;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=autoinducer AI-2 transmembrane transport|1905887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209192.1;locus_tag=AD853_RS00765;product=autoinducer 2 ABC transporter ATP-binding protein LsrA;protein_id=WP_038824293.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 185699 186754 . + . ID=gene-AD853_RS00770;Name=lsrC;gbkey=Gene;gene=lsrC;gene_biotype=protein_coding;locus_tag=AD853_RS00770;old_locus_tag=ERS008462_00154 NZ_CPUY01000001.1 Protein Homology CDS 185699 186754 . + 0 ID=cds-WP_038824294.1;Parent=gene-AD853_RS00770;Dbxref=GenBank:WP_038824294.1;Name=WP_038824294.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=lsrC;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011191664.1;locus_tag=AD853_RS00770;product=autoinducer 2 ABC transporter permease LsrC;protein_id=WP_038824294.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 186751 187752 . + . ID=gene-AD853_RS00775;Name=lsrD;gbkey=Gene;gene=lsrD;gene_biotype=protein_coding;locus_tag=AD853_RS00775;old_locus_tag=ERS008462_00155 NZ_CPUY01000001.1 Protein Homology CDS 186751 187752 . + 0 ID=cds-WP_011191663.1;Parent=gene-AD853_RS00775;Dbxref=GenBank:WP_011191663.1;Name=WP_011191663.1;gbkey=CDS;gene=lsrD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011191663.1;locus_tag=AD853_RS00775;product=autoinducer 2 ABC transporter permease LsrD;protein_id=WP_011191663.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 187797 188816 . + . ID=gene-AD853_RS00780;Name=lsrB;gbkey=Gene;gene=lsrB;gene_biotype=protein_coding;locus_tag=AD853_RS00780;old_locus_tag=ERS008462_00156 NZ_CPUY01000001.1 Protein Homology CDS 187797 188816 . + 0 ID=cds-WP_038824295.1;Parent=gene-AD853_RS00780;Dbxref=GenBank:WP_038824295.1;Name=WP_038824295.1;gbkey=CDS;gene=lsrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310150.1;locus_tag=AD853_RS00780;product=autoinducer 2 ABC transporter substrate-binding protein LsrB;protein_id=WP_038824295.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 188872 189747 . + . ID=gene-AD853_RS00785;Name=lsrF;gbkey=Gene;gene=lsrF;gene_biotype=protein_coding;locus_tag=AD853_RS00785;old_locus_tag=ERS008462_00157 NZ_CPUY01000001.1 Protein Homology CDS 188872 189747 . + 0 ID=cds-WP_011191661.1;Parent=gene-AD853_RS00785;Dbxref=GenBank:WP_011191661.1;Name=WP_011191661.1;Ontology_term=GO:0016829;gbkey=CDS;gene=lsrF;go_function=lyase activity|0016829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462959.1;locus_tag=AD853_RS00785;product=3-hydroxy-5-phosphonooxypentane-2%2C4-dione thiolase;protein_id=WP_011191661.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 189812 190102 . + . ID=gene-AD853_RS00790;Name=lsrG;gbkey=Gene;gene=lsrG;gene_biotype=protein_coding;locus_tag=AD853_RS00790;old_locus_tag=ERS008462_00158 NZ_CPUY01000001.1 Protein Homology CDS 189812 190102 . + 0 ID=cds-WP_002209186.1;Parent=gene-AD853_RS00790;Dbxref=GenBank:WP_002209186.1;Name=WP_002209186.1;gbkey=CDS;gene=lsrG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004716509.1;locus_tag=AD853_RS00790;product=(4S)-4-hydroxy-5-phosphonooxypentane-2%2C3-dione isomerase;protein_id=WP_002209186.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 190403 190894 . + . ID=gene-AD853_RS00795;Name=AD853_RS00795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS00795;old_locus_tag=ERS008462_00159 NZ_CPUY01000001.1 Protein Homology CDS 190403 190894 . + 0 ID=cds-WP_002209184.1;Parent=gene-AD853_RS00795;Dbxref=GenBank:WP_002209184.1;Name=WP_002209184.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209184.1;locus_tag=AD853_RS00795;product=YjjA family protein;protein_id=WP_002209184.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 190956 193550 . - . ID=gene-AD853_RS00800;Name=ptsP;gbkey=Gene;gene=ptsP;gene_biotype=protein_coding;locus_tag=AD853_RS00800;old_locus_tag=ERS008462_00160 NZ_CPUY01000001.1 Protein Homology CDS 190956 193550 . - 0 ID=cds-WP_050124554.1;Parent=gene-AD853_RS00800;Dbxref=GenBank:WP_050124554.1;Name=WP_050124554.1;Ontology_term=GO:0009401,GO:0008965;gbkey=CDS;gene=ptsP;go_function=phosphoenolpyruvate-protein phosphotransferase activity|0008965||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002228120.1;locus_tag=AD853_RS00800;product=phosphoenolpyruvate--protein phosphotransferase;protein_id=WP_050124554.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 193915 194997 . + . ID=gene-AD853_RS00805;Name=AD853_RS00805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS00805;old_locus_tag=ERS008462_00161 NZ_CPUY01000001.1 Protein Homology CDS 193915 194997 . + 0 ID=cds-WP_011191659.1;Parent=gene-AD853_RS00805;Dbxref=GenBank:WP_011191659.1;Name=WP_011191659.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016261691.1;locus_tag=AD853_RS00805;product=PTS fructose transporter subunit EIIC;protein_id=WP_011191659.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 195341 195661 . + . ID=gene-AD853_RS00810;Name=AD853_RS00810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS00810;old_locus_tag=ERS008462_00162 NZ_CPUY01000001.1 Protein Homology CDS 195341 195661 . + 0 ID=cds-WP_002209181.1;Parent=gene-AD853_RS00810;Dbxref=GenBank:WP_002209181.1;Name=WP_002209181.1;Ontology_term=GO:0009401,GO:0022877;gbkey=CDS;go_function=protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity|0022877||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209181.1;locus_tag=AD853_RS00810;product=PTS fructose-like transporter subunit IIB;protein_id=WP_002209181.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 195754 196098 . + . ID=gene-AD853_RS00815;Name=AD853_RS00815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS00815;old_locus_tag=ERS008462_00163 NZ_CPUY01000001.1 Protein Homology CDS 195754 196098 . + 0 ID=cds-WP_002209180.1;Parent=gene-AD853_RS00815;Dbxref=GenBank:WP_002209180.1;Name=WP_002209180.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209180.1;locus_tag=AD853_RS00815;product=PTS fructose-like transporter subunit IIB;protein_id=WP_002209180.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 196091 196966 . - . ID=gene-AD853_RS00820;Name=AD853_RS00820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS00820;old_locus_tag=ERS008462_00164 NZ_CPUY01000001.1 Protein Homology CDS 196091 196966 . - 0 ID=cds-WP_002209179.1;Parent=gene-AD853_RS00820;Dbxref=GenBank:WP_002209179.1;Name=WP_002209179.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011191658.1;locus_tag=AD853_RS00820;product=helix-turn-helix transcriptional regulator;protein_id=WP_002209179.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 196968 197504 . - . ID=gene-AD853_RS00825;Name=AD853_RS00825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS00825;old_locus_tag=ERS008462_00165 NZ_CPUY01000001.1 Protein Homology CDS 196968 197504 . - 0 ID=cds-WP_038824264.1;Parent=gene-AD853_RS00825;Dbxref=GenBank:WP_038824264.1;Name=WP_038824264.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304625.1;locus_tag=AD853_RS00825;product=hypothetical protein;protein_id=WP_038824264.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 198218 199414 . + . ID=gene-AD853_RS00830;Name=AD853_RS00830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS00830;old_locus_tag=ERS008462_00166 NZ_CPUY01000001.1 Protein Homology CDS 198218 199414 . + 0 ID=cds-WP_011191657.1;Parent=gene-AD853_RS00830;Dbxref=GenBank:WP_011191657.1;Name=WP_011191657.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016598657.1;locus_tag=AD853_RS00830;product=YjgN family protein;protein_id=WP_011191657.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 199443 200489 . + . ID=gene-AD853_RS00835;Name=AD853_RS00835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS00835;old_locus_tag=ERS008462_00167 NZ_CPUY01000001.1 Protein Homology CDS 199443 200489 . + 0 ID=cds-WP_038824263.1;Parent=gene-AD853_RS00835;Dbxref=GenBank:WP_038824263.1;Name=WP_038824263.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209176.1;locus_tag=AD853_RS00835;product=M48 family metallopeptidase;protein_id=WP_038824263.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 200832 203090 . + . ID=gene-AD853_RS00840;Name=AD853_RS00840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS00840;old_locus_tag=ERS008462_00168 NZ_CPUY01000001.1 Protein Homology CDS 200832 203090 . + 0 ID=cds-WP_223847743.1;Parent=gene-AD853_RS00840;Dbxref=GenBank:WP_223847743.1;Name=WP_223847743.1;Ontology_term=GO:0009307,GO:0003677,GO:0009007;gbkey=CDS;go_function=DNA binding|0003677||IEA,site-specific DNA-methyltransferase (adenine-specific) activity|0009007||IEA;go_process=DNA restriction-modification system|0009307||IEA;inference=COORDINATES: protein motif:HMM:TIGR00497.1;locus_tag=AD853_RS00840;product=type I restriction-modification system subunit M;protein_id=WP_223847743.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 203168 203422 . + . ID=gene-AD853_RS21955;Name=AD853_RS21955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS21955;old_locus_tag=ERS008462_00169 NZ_CPUY01000001.1 GeneMarkS-2+ CDS 203168 203422 . + 0 ID=cds-WP_223847742.1;Parent=gene-AD853_RS21955;Dbxref=GenBank:WP_223847742.1;Name=WP_223847742.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AD853_RS21955;product=hypothetical protein;protein_id=WP_223847742.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 203425 204708 . + . ID=gene-AD853_RS00845;Name=AD853_RS00845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS00845;old_locus_tag=ERS008462_00170 NZ_CPUY01000001.1 Protein Homology CDS 203425 204708 . + 0 ID=cds-WP_038824262.1;Parent=gene-AD853_RS00845;Dbxref=GenBank:WP_038824262.1;Name=WP_038824262.1;Ontology_term=GO:0006304,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA modification|0006304||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011191655.1;locus_tag=AD853_RS00845;product=restriction endonuclease subunit S;protein_id=WP_038824262.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 204723 205046 . + . ID=gene-AD853_RS21960;Name=AD853_RS21960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS21960;old_locus_tag=ERS008462_00171 NZ_CPUY01000001.1 GeneMarkS-2+ CDS 204723 205046 . + 0 ID=cds-WP_223847741.1;Parent=gene-AD853_RS21960;Dbxref=GenBank:WP_223847741.1;Name=WP_223847741.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AD853_RS21960;product=PDDEXK family nuclease;protein_id=WP_223847741.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 205068 207971 . + . ID=gene-AD853_RS00850;Name=AD853_RS00850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS00850;old_locus_tag=ERS008462_00172 NZ_CPUY01000001.1 Protein Homology CDS 205068 207971 . + 0 ID=cds-WP_223847770.1;Parent=gene-AD853_RS00850;Dbxref=GenBank:WP_223847770.1;Name=WP_223847770.1;Ontology_term=GO:0009307,GO:0003677,GO:0004386,GO:0005524,GO:0009035,GO:0016887;gbkey=CDS;go_function=DNA binding|0003677||IEA,helicase activity|0004386||IEA,ATP binding|0005524||IEA,type I site-specific deoxyribonuclease activity|0009035||IEA,ATP hydrolysis activity|0016887||IEA;go_process=DNA restriction-modification system|0009307||IEA;inference=COORDINATES: protein motif:HMM:TIGR00348.1;locus_tag=AD853_RS00850;product=type I restriction endonuclease subunit R;protein_id=WP_223847770.1;transl_table=11 NZ_CPUY01000001.1 RefSeq pseudogene 208221 209487 . - . ID=gene-AD853_RS00855;Name=AD853_RS00855;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD853_RS00855;pseudo=true NZ_CPUY01000001.1 Protein Homology CDS 208221 209487 . - 0 ID=cds-AD853_RS00855;Parent=gene-AD853_RS00855;Note=frameshifted%3B internal stop;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019842469.1;locus_tag=AD853_RS00855;product=tyrosine-type recombinase/integrase;pseudo=true;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 209688 209772 . - . ID=gene-AD853_RS00860;Name=AD853_RS00860;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD853_RS00860;old_locus_tag=ERS008462_00176 NZ_CPUY01000001.1 tRNAscan-SE tRNA 209688 209772 . - . ID=rna-AD853_RS00860;Parent=gene-AD853_RS00860;anticodon=(pos:complement(209736..209738));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD853_RS00860;product=tRNA-Leu NZ_CPUY01000001.1 tRNAscan-SE exon 209688 209772 . - . ID=exon-AD853_RS00860-1;Parent=rna-AD853_RS00860;anticodon=(pos:complement(209736..209738));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD853_RS00860;product=tRNA-Leu NZ_CPUY01000001.1 RefSeq gene 209877 210953 . - . ID=gene-AD853_RS00865;Name=lptG;gbkey=Gene;gene=lptG;gene_biotype=protein_coding;locus_tag=AD853_RS00865;old_locus_tag=ERS008462_00177 NZ_CPUY01000001.1 Protein Homology CDS 209877 210953 . - 0 ID=cds-WP_002223173.1;Parent=gene-AD853_RS00865;Dbxref=GenBank:WP_002223173.1;Name=WP_002223173.1;Ontology_term=GO:0055085,GO:0015221,GO:0043190;gbkey=CDS;gene=lptG;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=lipopolysaccharide transmembrane transporter activity|0015221||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002223173.1;locus_tag=AD853_RS00865;product=LPS export ABC transporter permease LptG;protein_id=WP_002223173.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 210953 212047 . - . ID=gene-AD853_RS00870;Name=lptF;gbkey=Gene;gene=lptF;gene_biotype=protein_coding;locus_tag=AD853_RS00870;old_locus_tag=ERS008462_00178 NZ_CPUY01000001.1 Protein Homology CDS 210953 212047 . - 0 ID=cds-WP_002209311.1;Parent=gene-AD853_RS00870;Dbxref=GenBank:WP_002209311.1;Name=WP_002209311.1;Ontology_term=GO:0055085,GO:0015221,GO:0043190;gbkey=CDS;gene=lptF;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=lipopolysaccharide transmembrane transporter activity|0015221||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004389287.1;locus_tag=AD853_RS00870;product=LPS export ABC transporter permease LptF;protein_id=WP_002209311.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 212327 213838 . + . ID=gene-AD853_RS00875;Name=pepA;gbkey=Gene;gene=pepA;gene_biotype=protein_coding;locus_tag=AD853_RS00875;old_locus_tag=ERS008462_00179 NZ_CPUY01000001.1 Protein Homology CDS 212327 213838 . + 0 ID=cds-WP_002209310.1;Parent=gene-AD853_RS00875;Dbxref=GenBank:WP_002209310.1;Name=WP_002209310.1;Ontology_term=GO:0006508,GO:0019538,GO:0030145,GO:0070006;gbkey=CDS;gene=pepA;go_function=manganese ion binding|0030145||IEA,metalloaminopeptidase activity|0070006||IEA;go_process=proteolysis|0006508||IEA,protein metabolic process|0019538||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007767120.1;locus_tag=AD853_RS00875;product=leucyl aminopeptidase;protein_id=WP_002209310.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 213989 214438 . + . ID=gene-AD853_RS00880;Name=AD853_RS00880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS00880;old_locus_tag=ERS008462_00180 NZ_CPUY01000001.1 Protein Homology CDS 213989 214438 . + 0 ID=cds-WP_033852822.1;Parent=gene-AD853_RS00880;Dbxref=GenBank:WP_033852822.1;Name=WP_033852822.1;Ontology_term=GO:0006260,GO:0006261,GO:0003677,GO:0003887;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA,DNA-templated DNA replication|0006261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209309.1;locus_tag=AD853_RS00880;product=DNA polymerase III subunit chi;protein_id=WP_033852822.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 214451 217348 . + . ID=gene-AD853_RS00885;Name=AD853_RS00885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS00885;old_locus_tag=ERS008462_00181 NZ_CPUY01000001.1 Protein Homology CDS 214451 217348 . + 0 ID=cds-WP_012304638.1;Parent=gene-AD853_RS00885;Dbxref=GenBank:WP_012304638.1;Name=WP_012304638.1;Ontology_term=GO:0006438,GO:0000166,GO:0004812,GO:0004832,GO:0005524;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,valine-tRNA ligase activity|0004832||IEA,ATP binding|0005524||IEA;go_process=valyl-tRNA aminoacylation|0006438||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004720449.1;locus_tag=AD853_RS00885;product=valine--tRNA ligase;protein_id=WP_012304638.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 217491 217994 . + . ID=gene-AD853_RS00890;Name=AD853_RS00890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS00890;old_locus_tag=ERS008462_00182 NZ_CPUY01000001.1 Protein Homology CDS 217491 217994 . + 0 ID=cds-WP_038824261.1;Parent=gene-AD853_RS00890;Dbxref=GenBank:WP_038824261.1;Name=WP_038824261.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304639.1;locus_tag=AD853_RS00890;product=GNAT family N-acetyltransferase;protein_id=WP_038824261.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 218354 218785 . - . ID=gene-AD853_RS00895;Name=rraB;gbkey=Gene;gene=rraB;gene_biotype=protein_coding;locus_tag=AD853_RS00895;old_locus_tag=ERS008462_00183 NZ_CPUY01000001.1 Protein Homology CDS 218354 218785 . - 0 ID=cds-WP_002209303.1;Parent=gene-AD853_RS00895;Dbxref=GenBank:WP_002209303.1;Name=WP_002209303.1;gbkey=CDS;gene=rraB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005156155.1;locus_tag=AD853_RS00895;product=ribonuclease E inhibitor RraB;protein_id=WP_002209303.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 218996 220003 . + . ID=gene-AD853_RS00900;Name=argF;gbkey=Gene;gene=argF;gene_biotype=protein_coding;locus_tag=AD853_RS00900;old_locus_tag=ERS008462_00184 NZ_CPUY01000001.1 Protein Homology CDS 218996 220003 . + 0 ID=cds-WP_011191651.1;Parent=gene-AD853_RS00900;Dbxref=GenBank:WP_011191651.1;Name=WP_011191651.1;Ontology_term=GO:0042450,GO:0004585;gbkey=CDS;gene=argF;go_function=ornithine carbamoyltransferase activity|0004585||IEA;go_process=L-arginine biosynthetic process via ornithine|0042450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105725.1;locus_tag=AD853_RS00900;product=ornithine carbamoyltransferase;protein_id=WP_011191651.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 220266 220724 . - . ID=gene-AD853_RS00905;Name=AD853_RS00905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS00905;old_locus_tag=ERS008462_00185 NZ_CPUY01000001.1 Protein Homology CDS 220266 220724 . - 0 ID=cds-WP_002209301.1;Parent=gene-AD853_RS00905;Dbxref=GenBank:WP_002209301.1;Name=WP_002209301.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012230161.1;locus_tag=AD853_RS00905;product=NanQ anomerase/TabA/YiaL family protein;protein_id=WP_002209301.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 221363 222931 . + . ID=gene-AD853_RS00910;Name=AD853_RS00910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS00910;old_locus_tag=ERS008462_00186 NZ_CPUY01000001.1 Protein Homology CDS 221363 222931 . + 0 ID=cds-WP_012105726.1;Parent=gene-AD853_RS00910;Dbxref=GenBank:WP_012105726.1;Name=WP_012105726.1;Ontology_term=GO:0005524,GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019080649.1;locus_tag=AD853_RS00910;product=ABC transporter substrate-binding protein;protein_id=WP_012105726.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 223027 224076 . + . ID=gene-AD853_RS00915;Name=AD853_RS00915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS00915;old_locus_tag=ERS008462_00187 NZ_CPUY01000001.1 Protein Homology CDS 223027 224076 . + 0 ID=cds-WP_002209300.1;Parent=gene-AD853_RS00915;Dbxref=GenBank:WP_002209300.1;Name=WP_002209300.1;Ontology_term=GO:0055085;gbkey=CDS;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011815472.1;locus_tag=AD853_RS00915;product=ABC transporter permease;protein_id=WP_002209300.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 224095 224931 . + . ID=gene-AD853_RS00920;Name=AD853_RS00920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS00920;old_locus_tag=ERS008462_00188 NZ_CPUY01000001.1 Protein Homology CDS 224095 224931 . + 0 ID=cds-WP_038823739.1;Parent=gene-AD853_RS00920;Dbxref=GenBank:WP_038823739.1;Name=WP_038823739.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209299.1;locus_tag=AD853_RS00920;product=ABC transporter permease;protein_id=WP_038823739.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 224924 225802 . + . ID=gene-AD853_RS00925;Name=AD853_RS00925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS00925;old_locus_tag=ERS008462_00189 NZ_CPUY01000001.1 Protein Homology CDS 224924 225802 . + 0 ID=cds-WP_002209298.1;Parent=gene-AD853_RS00925;Dbxref=GenBank:WP_002209298.1;Name=WP_002209298.1;Ontology_term=GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011815471.1;locus_tag=AD853_RS00925;product=ABC transporter ATP-binding protein;protein_id=WP_002209298.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 225789 226505 . + . ID=gene-AD853_RS00930;Name=AD853_RS00930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS00930;old_locus_tag=ERS008462_00190 NZ_CPUY01000001.1 Protein Homology CDS 225789 226505 . + 0 ID=cds-WP_002209297.1;Parent=gene-AD853_RS00930;Dbxref=GenBank:WP_002209297.1;Name=WP_002209297.1;Ontology_term=GO:0005524,GO:0016887,GO:0022857,GO:0042626,GO:0140359,GO:0043190;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,transmembrane transporter activity|0022857||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209297.1;locus_tag=AD853_RS00930;product=ABC transporter ATP-binding protein;protein_id=WP_002209297.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 226863 229001 . + . ID=gene-AD853_RS00935;Name=nrdD;gbkey=Gene;gene=nrdD;gene_biotype=protein_coding;locus_tag=AD853_RS00935;old_locus_tag=ERS008462_00191 NZ_CPUY01000001.1 Protein Homology CDS 226863 229001 . + 0 ID=cds-WP_002209296.1;Parent=gene-AD853_RS00935;Dbxref=GenBank:WP_002209296.1;Name=WP_002209296.1;Ontology_term=GO:0006260,GO:0008998;gbkey=CDS;gene=nrdD;go_function=ribonucleoside-triphosphate reductase (thioredoxin) activity|0008998||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004389268.1;locus_tag=AD853_RS00935;product=anaerobic ribonucleoside-triphosphate reductase;protein_id=WP_002209296.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 229178 229642 . + . ID=gene-AD853_RS00940;Name=nrdG;gbkey=Gene;gene=nrdG;gene_biotype=protein_coding;locus_tag=AD853_RS00940;old_locus_tag=ERS008462_00192 NZ_CPUY01000001.1 Protein Homology CDS 229178 229642 . + 0 ID=cds-WP_032466992.1;Parent=gene-AD853_RS00940;Dbxref=GenBank:WP_032466992.1;Name=WP_032466992.1;Ontology_term=GO:0043365,GO:0051539;gbkey=CDS;gene=nrdG;go_function=[formate-C-acetyltransferase]-activating enzyme activity|0043365||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463312.1;locus_tag=AD853_RS00940;product=anaerobic ribonucleoside-triphosphate reductase-activating protein;protein_id=WP_032466992.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 229970 230695 . + . ID=gene-AD853_RS00945;Name=phnF;gbkey=Gene;gene=phnF;gene_biotype=protein_coding;locus_tag=AD853_RS00945;old_locus_tag=ERS008462_00194 NZ_CPUY01000001.1 Protein Homology CDS 229970 230695 . + 0 ID=cds-WP_038823740.1;Parent=gene-AD853_RS00945;Dbxref=GenBank:WP_038823740.1;Name=WP_038823740.1;gbkey=CDS;gene=phnF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304641.1;locus_tag=AD853_RS00945;product=phosphonate metabolism transcriptional regulator PhnF;protein_id=WP_038823740.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 230696 231172 . + . ID=gene-AD853_RS00950;Name=phnG;gbkey=Gene;gene=phnG;gene_biotype=protein_coding;locus_tag=AD853_RS00950;old_locus_tag=ERS008462_00195 NZ_CPUY01000001.1 Protein Homology CDS 230696 231172 . + 0 ID=cds-WP_038823741.1;Parent=gene-AD853_RS00950;Dbxref=GenBank:WP_038823741.1;Name=WP_038823741.1;Ontology_term=GO:0015716,GO:0019634;gbkey=CDS;gene=phnG;go_process=organic phosphonate transport|0015716||IEA,organic phosphonate metabolic process|0019634||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209292.1;locus_tag=AD853_RS00950;product=phosphonate C-P lyase system protein PhnG;protein_id=WP_038823741.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 231172 231783 . + . ID=gene-AD853_RS00955;Name=phnH;gbkey=Gene;gene=phnH;gene_biotype=protein_coding;locus_tag=AD853_RS00955;old_locus_tag=ERS008462_00196 NZ_CPUY01000001.1 Protein Homology CDS 231172 231783 . + 0 ID=cds-WP_038823742.1;Parent=gene-AD853_RS00955;Dbxref=GenBank:WP_038823742.1;Name=WP_038823742.1;Ontology_term=GO:0019634;gbkey=CDS;gene=phnH;go_process=organic phosphonate metabolic process|0019634||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011191648.1;locus_tag=AD853_RS00955;product=phosphonate C-P lyase system protein PhnH;protein_id=WP_038823742.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 231783 232946 . + . ID=gene-AD853_RS00960;Name=AD853_RS00960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS00960;old_locus_tag=ERS008462_00197 NZ_CPUY01000001.1 Protein Homology CDS 231783 232946 . + 0 ID=cds-WP_038823743.1;Parent=gene-AD853_RS00960;Dbxref=GenBank:WP_038823743.1;Name=WP_038823743.1;Ontology_term=GO:0019634;gbkey=CDS;go_process=organic phosphonate metabolic process|0019634||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304643.1;locus_tag=AD853_RS00960;product=carbon-phosphorus lyase complex subunit;protein_id=WP_038823743.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 232939 233820 . + . ID=gene-AD853_RS00965;Name=AD853_RS00965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS00965;old_locus_tag=ERS008462_00198 NZ_CPUY01000001.1 Protein Homology CDS 232939 233820 . + 0 ID=cds-WP_038823744.1;Parent=gene-AD853_RS00965;Dbxref=GenBank:WP_038823744.1;Name=WP_038823744.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209289.1;locus_tag=AD853_RS00965;product=alpha-D-ribose 1-methylphosphonate 5-phosphate C-P-lyase PhnJ;protein_id=WP_038823744.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 233820 234611 . + . ID=gene-AD853_RS00970;Name=phnK;gbkey=Gene;gene=phnK;gene_biotype=protein_coding;locus_tag=AD853_RS00970;old_locus_tag=ERS008462_00199 NZ_CPUY01000001.1 Protein Homology CDS 233820 234611 . + 0 ID=cds-WP_038823745.1;Parent=gene-AD853_RS00970;Dbxref=GenBank:WP_038823745.1;Name=WP_038823745.1;Ontology_term=GO:0019634,GO:0018835;gbkey=CDS;gene=phnK;go_function=carbon phosphorus lyase activity|0018835||IEA;go_process=organic phosphonate metabolic process|0019634||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011191645.1;locus_tag=AD853_RS00970;product=phosphonate C-P lyase system protein PhnK;protein_id=WP_038823745.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 235000 235719 . + . ID=gene-AD853_RS00975;Name=phnL;gbkey=Gene;gene=phnL;gene_biotype=protein_coding;locus_tag=AD853_RS00975;old_locus_tag=ERS008462_00200 NZ_CPUY01000001.1 Protein Homology CDS 235000 235719 . + 0 ID=cds-WP_012105733.1;Parent=gene-AD853_RS00975;Dbxref=GenBank:WP_012105733.1;Name=WP_012105733.1;Ontology_term=GO:0019634,GO:0018835;gbkey=CDS;gene=phnL;go_function=carbon phosphorus lyase activity|0018835||IEA;go_process=organic phosphonate metabolic process|0019634||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105733.1;locus_tag=AD853_RS00975;product=phosphonate C-P lyase system protein PhnL;protein_id=WP_012105733.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 235716 236852 . + . ID=gene-AD853_RS00980;Name=phnM;gbkey=Gene;gene=phnM;gene_biotype=protein_coding;locus_tag=AD853_RS00980;old_locus_tag=ERS008462_00201 NZ_CPUY01000001.1 Protein Homology CDS 235716 236852 . + 0 ID=cds-WP_038823747.1;Parent=gene-AD853_RS00980;Dbxref=GenBank:WP_038823747.1;Name=WP_038823747.1;Ontology_term=GO:0019700,GO:0016810;gbkey=CDS;gene=phnM;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA;go_process=organic phosphonate catabolic process|0019700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209286.1;locus_tag=AD853_RS00980;product=alpha-D-ribose 1-methylphosphonate 5-triphosphate diphosphatase;protein_id=WP_038823747.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 236852 237433 . + . ID=gene-AD853_RS00985;Name=phnN;gbkey=Gene;gene=phnN;gene_biotype=protein_coding;locus_tag=AD853_RS00985;old_locus_tag=ERS008462_00202 NZ_CPUY01000001.1 Protein Homology CDS 236852 237433 . + 0 ID=cds-WP_038823748.1;Parent=gene-AD853_RS00985;Dbxref=GenBank:WP_038823748.1;Name=WP_038823748.1;Ontology_term=GO:0006015,GO:0033863;gbkey=CDS;gene=phnN;go_function=ribose 1%2C5-bisphosphate phosphokinase activity|0033863||IEA;go_process=5-phosphoribose 1-diphosphate biosynthetic process|0006015||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209285.1;locus_tag=AD853_RS00985;product=ribose 1%2C5-bisphosphokinase;protein_id=WP_038823748.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 237424 238176 . + . ID=gene-AD853_RS00990;Name=phnP;gbkey=Gene;gene=phnP;gene_biotype=protein_coding;locus_tag=AD853_RS00990;old_locus_tag=ERS008462_00203 NZ_CPUY01000001.1 Protein Homology CDS 237424 238176 . + 0 ID=cds-WP_038823750.1;Parent=gene-AD853_RS00990;Dbxref=GenBank:WP_038823750.1;Name=WP_038823750.1;Ontology_term=GO:0019700,GO:0008081;gbkey=CDS;gene=phnP;go_function=phosphoric diester hydrolase activity|0008081||IEA;go_process=organic phosphonate catabolic process|0019700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304647.1;locus_tag=AD853_RS00990;product=phosphonate metabolism protein PhnP;protein_id=WP_038823750.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 238189 238827 . - . ID=gene-AD853_RS00995;Name=AD853_RS00995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS00995;old_locus_tag=ERS008462_00204 NZ_CPUY01000001.1 Protein Homology CDS 238189 238827 . - 0 ID=cds-WP_038823751.1;Parent=gene-AD853_RS00995;Dbxref=GenBank:WP_038823751.1;Name=WP_038823751.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209283.1;locus_tag=AD853_RS00995;product=Rossmann-fold NAD(P)-binding domain-containing protein;protein_id=WP_038823751.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 238979 239422 . - . ID=gene-AD853_RS01000;Name=AD853_RS01000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS01000;old_locus_tag=ERS008462_00205 NZ_CPUY01000001.1 Protein Homology CDS 238979 239422 . - 0 ID=cds-WP_011191642.1;Parent=gene-AD853_RS01000;Dbxref=GenBank:WP_011191642.1;Name=WP_011191642.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209282.1;locus_tag=AD853_RS01000;product=YhbP family protein;protein_id=WP_011191642.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 239536 240702 . - . ID=gene-AD853_RS01005;Name=AD853_RS01005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS01005;old_locus_tag=ERS008462_00206 NZ_CPUY01000001.1 Protein Homology CDS 239536 240702 . - 0 ID=cds-WP_002209281.1;Parent=gene-AD853_RS01005;Dbxref=GenBank:WP_002209281.1;Name=WP_002209281.1;Ontology_term=GO:0016829,GO:0042597;gbkey=CDS;go_component=periplasmic space|0042597||IEA;go_function=lyase activity|0016829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209281.1;locus_tag=AD853_RS01005;product=alginate lyase family protein;protein_id=WP_002209281.1;transl_table=11 NZ_CPUY01000001.1 RefSeq pseudogene 240717 241811 . - . ID=gene-AD853_RS01010;Name=AD853_RS01010;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD853_RS01010;pseudo=true NZ_CPUY01000001.1 Protein Homology CDS 240717 241811 . - 0 ID=cds-AD853_RS01010;Parent=gene-AD853_RS01010;Note=internal stop;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209280.1;locus_tag=AD853_RS01010;product=ABC transporter ATP-binding protein;pseudo=true;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 241823 242662 . - . ID=gene-AD853_RS01015;Name=AD853_RS01015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS01015;old_locus_tag=ERS008462_00209 NZ_CPUY01000001.1 Protein Homology CDS 241823 242662 . - 0 ID=cds-WP_002209279.1;Parent=gene-AD853_RS01015;Dbxref=GenBank:WP_002209279.1;Name=WP_002209279.1;Ontology_term=GO:0008643,GO:0055085;gbkey=CDS;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004707080.1;locus_tag=AD853_RS01015;product=carbohydrate ABC transporter permease;protein_id=WP_002209279.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 242681 243565 . - . ID=gene-AD853_RS01020;Name=AD853_RS01020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS01020;old_locus_tag=ERS008462_00210 NZ_CPUY01000001.1 Protein Homology CDS 242681 243565 . - 0 ID=cds-WP_011191641.1;Parent=gene-AD853_RS01020;Dbxref=GenBank:WP_011191641.1;Name=WP_011191641.1;Ontology_term=GO:0008643,GO:0055085,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011815457.1;locus_tag=AD853_RS01020;product=carbohydrate ABC transporter permease;protein_id=WP_011191641.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 243573 244886 . - . ID=gene-AD853_RS01025;Name=AD853_RS01025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS01025;old_locus_tag=ERS008462_00211 NZ_CPUY01000001.1 Protein Homology CDS 243573 244886 . - 0 ID=cds-WP_038823752.1;Parent=gene-AD853_RS01025;Dbxref=GenBank:WP_038823752.1;Name=WP_038823752.1;Ontology_term=GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011191640.1;locus_tag=AD853_RS01025;product=ABC transporter substrate-binding protein;protein_id=WP_038823752.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 245447 246670 . + . ID=gene-AD853_RS01030;Name=AD853_RS01030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS01030;old_locus_tag=ERS008462_00212 NZ_CPUY01000001.1 Protein Homology CDS 245447 246670 . + 0 ID=cds-WP_050124549.1;Parent=gene-AD853_RS01030;Dbxref=GenBank:WP_050124549.1;Name=WP_050124549.1;Ontology_term=GO:0016829,GO:0042597;gbkey=CDS;go_component=periplasmic space|0042597||IEA;go_function=lyase activity|0016829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304649.1;locus_tag=AD853_RS01030;product=alginate lyase family protein;protein_id=WP_050124549.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 246694 248712 . + . ID=gene-AD853_RS01035;Name=AD853_RS01035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS01035;old_locus_tag=ERS008462_00213 NZ_CPUY01000001.1 Protein Homology CDS 246694 248712 . + 0 ID=cds-WP_012105739.1;Parent=gene-AD853_RS01035;Dbxref=GenBank:WP_012105739.1;Name=WP_012105739.1;Ontology_term=GO:0016829;gbkey=CDS;go_function=lyase activity|0016829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209275.1;locus_tag=AD853_RS01035;product=heparinase II/III domain-containing protein;protein_id=WP_012105739.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 248940 249227 . + . ID=gene-AD853_RS01040;Name=AD853_RS01040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS01040;old_locus_tag=ERS008462_00214 NZ_CPUY01000001.1 Protein Homology CDS 248940 249227 . + 0 ID=cds-WP_038823755.1;Parent=gene-AD853_RS01040;Dbxref=GenBank:WP_038823755.1;Name=WP_038823755.1;Ontology_term=GO:0004518;gbkey=CDS;go_function=nuclease activity|0004518||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209274.1;locus_tag=AD853_RS01040;product=GIY-YIG nuclease family protein;protein_id=WP_038823755.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 249402 249905 . - . ID=gene-AD853_RS01050;Name=AD853_RS01050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS01050;old_locus_tag=ERS008462_00215 NZ_CPUY01000001.1 Protein Homology CDS 249402 249905 . - 0 ID=cds-WP_038823756.1;Parent=gene-AD853_RS01050;Dbxref=GenBank:WP_038823756.1;Name=WP_038823756.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209273.1;locus_tag=AD853_RS01050;product=GNAT family N-acetyltransferase;protein_id=WP_038823756.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 249899 250420 . - . ID=gene-AD853_RS01055;Name=ubiT;gbkey=Gene;gene=ubiT;gene_biotype=protein_coding;locus_tag=AD853_RS01055;old_locus_tag=ERS008462_00216 NZ_CPUY01000001.1 Protein Homology CDS 249899 250420 . - 0 ID=cds-WP_050124550.1;Parent=gene-AD853_RS01055;Dbxref=GenBank:WP_050124550.1;Name=WP_050124550.1;Ontology_term=GO:0006744,GO:0110142;gbkey=CDS;gene=ubiT;go_component=ubiquinone biosynthesis complex|0110142||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209272.1;locus_tag=AD853_RS01055;product=ubiquinone anaerobic biosynthesis accessory factor UbiT;protein_id=WP_050124550.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 250736 251731 . + . ID=gene-AD853_RS01065;Name=ubiU;gbkey=Gene;gene=ubiU;gene_biotype=protein_coding;locus_tag=AD853_RS01065;old_locus_tag=ERS008462_00217 NZ_CPUY01000001.1 Protein Homology CDS 250736 251731 . + 0 ID=cds-WP_002209270.1;Parent=gene-AD853_RS01065;Dbxref=GenBank:WP_002209270.1;Name=WP_002209270.1;Ontology_term=GO:0006744;gbkey=CDS;gene=ubiU;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017457364.1;locus_tag=AD853_RS01065;product=ubiquinone anaerobic biosynthesis protein UbiU;protein_id=WP_002209270.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 251743 252621 . + . ID=gene-AD853_RS01070;Name=AD853_RS01070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS01070;old_locus_tag=ERS008462_00218 NZ_CPUY01000001.1 Protein Homology CDS 251743 252621 . + 0 ID=cds-WP_002209269.1;Parent=gene-AD853_RS01070;Dbxref=GenBank:WP_002209269.1;Name=WP_002209269.1;Ontology_term=GO:0006744;gbkey=CDS;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304652.1;locus_tag=AD853_RS01070;product=U32 family peptidase;protein_id=WP_002209269.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 252762 254168 . - . ID=gene-AD853_RS01075;Name=AD853_RS01075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS01075;old_locus_tag=ERS008462_00219 NZ_CPUY01000001.1 Protein Homology CDS 252762 254168 . - 0 ID=cds-WP_038823757.1;Parent=gene-AD853_RS01075;Dbxref=GenBank:WP_038823757.1;Name=WP_038823757.1;Ontology_term=GO:0006810,GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209268.1;locus_tag=AD853_RS01075;product=efflux transporter outer membrane subunit;protein_id=WP_038823757.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 254170 257295 . - . ID=gene-AD853_RS01080;Name=AD853_RS01080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS01080;old_locus_tag=ERS008462_00220 NZ_CPUY01000001.1 Protein Homology CDS 254170 257295 . - 0 ID=cds-WP_012105740.1;Parent=gene-AD853_RS01080;Dbxref=GenBank:WP_012105740.1;Name=WP_012105740.1;Ontology_term=GO:0042908,GO:0015562,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=xenobiotic transport|0042908||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209267.1;locus_tag=AD853_RS01080;product=efflux RND transporter permease subunit;protein_id=WP_012105740.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 257299 258459 . - . ID=gene-AD853_RS01085;Name=AD853_RS01085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS01085;old_locus_tag=ERS008462_00221 NZ_CPUY01000001.1 Protein Homology CDS 257299 258459 . - 0 ID=cds-WP_038823759.1;Parent=gene-AD853_RS01085;Dbxref=GenBank:WP_038823759.1;Name=WP_038823759.1;Ontology_term=GO:0006810,GO:0005215,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105741.1;locus_tag=AD853_RS01085;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_038823759.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 258967 260022 . + . ID=gene-AD853_RS01090;Name=AD853_RS01090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS01090;old_locus_tag=ERS008462_00222 NZ_CPUY01000001.1 Protein Homology CDS 258967 260022 . + 0 ID=cds-WP_012413453.1;Parent=gene-AD853_RS01090;Dbxref=GenBank:WP_012413453.1;Name=WP_012413453.1;Ontology_term=GO:0016705;gbkey=CDS;go_function=oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen|0016705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002214817.1;locus_tag=AD853_RS01090;product=luciferase-like monooxygenase;protein_id=WP_012413453.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 260091 260402 . - . ID=gene-AD853_RS01095;Name=AD853_RS01095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS01095;old_locus_tag=ERS008462_00224 NZ_CPUY01000001.1 Protein Homology CDS 260091 260402 . - 0 ID=cds-WP_002209263.1;Parent=gene-AD853_RS01095;Dbxref=GenBank:WP_002209263.1;Name=WP_002209263.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209263.1;locus_tag=AD853_RS01095;product=helix-turn-helix domain-containing protein;protein_id=WP_002209263.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 260426 260794 . - . ID=gene-AD853_RS01100;Name=AD853_RS01100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS01100;old_locus_tag=ERS008462_00225 NZ_CPUY01000001.1 Protein Homology CDS 260426 260794 . - 0 ID=cds-WP_002214818.1;Parent=gene-AD853_RS01100;Dbxref=GenBank:WP_002214818.1;Name=WP_002214818.1;Ontology_term=GO:0004519,GO:0090729,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=endonuclease activity|0004519||IEA,toxin activity|0090729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002214818.1;locus_tag=AD853_RS01100;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_002214818.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 261030 263024 . - . ID=gene-AD853_RS01110;Name=AD853_RS01110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS01110;old_locus_tag=ERS008462_00226 NZ_CPUY01000001.1 Protein Homology CDS 261030 263024 . - 0 ID=cds-WP_002209261.1;Parent=gene-AD853_RS01110;Dbxref=GenBank:WP_002209261.1;Name=WP_002209261.1;Ontology_term=GO:0000027,GO:0003724,GO:0005524;gbkey=CDS;go_function=RNA helicase activity|0003724||IEA,ATP binding|0005524||IEA;go_process=ribosomal large subunit assembly|0000027||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209261.1;locus_tag=AD853_RS01110;product=DEAD/DEAH family ATP-dependent RNA helicase;protein_id=WP_002209261.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 263014 263094 . - . ID=gene-AD853_RS22565;Name=yrbN;gbkey=Gene;gene=yrbN;gene_biotype=protein_coding;locus_tag=AD853_RS22565 NZ_CPUY01000001.1 Protein Homology CDS 263014 263094 . - 0 ID=cds-WP_096335046.1;Parent=gene-AD853_RS22565;Dbxref=GenBank:WP_096335046.1;Name=WP_096335046.1;gbkey=CDS;gene=yrbN;inference=COORDINATES: protein motif:HMM:NF033440.0;locus_tag=AD853_RS22565;product=protein YrbN;protein_id=WP_096335046.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 263211 264095 . - . ID=gene-AD853_RS01115;Name=nlpI;gbkey=Gene;gene=nlpI;gene_biotype=protein_coding;locus_tag=AD853_RS01115;old_locus_tag=ERS008462_00227 NZ_CPUY01000001.1 Protein Homology CDS 263211 264095 . - 0 ID=cds-WP_002209260.1;Parent=gene-AD853_RS01115;Dbxref=GenBank:WP_002209260.1;Name=WP_002209260.1;Ontology_term=GO:0005515;gbkey=CDS;gene=nlpI;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020802045.1;locus_tag=AD853_RS01115;product=lipoprotein NlpI;protein_id=WP_002209260.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 264220 266337 . - . ID=gene-AD853_RS01120;Name=pnp;gbkey=Gene;gene=pnp;gene_biotype=protein_coding;locus_tag=AD853_RS01120;old_locus_tag=ERS008462_00228 NZ_CPUY01000001.1 Protein Homology CDS 264220 266337 . - 0 ID=cds-WP_002209259.1;Parent=gene-AD853_RS01120;Dbxref=GenBank:WP_002209259.1;Name=WP_002209259.1;Ontology_term=GO:0006402,GO:0003723,GO:0004654;gbkey=CDS;gene=pnp;go_function=RNA binding|0003723||IEA,polyribonucleotide nucleotidyltransferase activity|0004654||IEA;go_process=mRNA catabolic process|0006402||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002228303.1;locus_tag=AD853_RS01120;product=polyribonucleotide nucleotidyltransferase;protein_id=WP_002209259.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 266601 266870 . - . ID=gene-AD853_RS01125;Name=rpsO;gbkey=Gene;gene=rpsO;gene_biotype=protein_coding;locus_tag=AD853_RS01125 NZ_CPUY01000001.1 Protein Homology CDS 266601 266870 . - 0 ID=cds-WP_002209257.1;Parent=gene-AD853_RS01125;Dbxref=GenBank:WP_002209257.1;Name=WP_002209257.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsO;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004933502.1;locus_tag=AD853_RS01125;product=30S ribosomal protein S15;protein_id=WP_002209257.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 266992 267966 . - . ID=gene-AD853_RS01130;Name=truB;gbkey=Gene;gene=truB;gene_biotype=protein_coding;locus_tag=AD853_RS01130;old_locus_tag=ERS008462_00231 NZ_CPUY01000001.1 Protein Homology CDS 266992 267966 . - 0 ID=cds-WP_002209256.1;Parent=gene-AD853_RS01130;Dbxref=GenBank:WP_002209256.1;Name=WP_002209256.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;gene=truB;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209256.1;locus_tag=AD853_RS01130;product=tRNA pseudouridine(55) synthase TruB;protein_id=WP_002209256.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 267966 268376 . - . ID=gene-AD853_RS01135;Name=rbfA;gbkey=Gene;gene=rbfA;gene_biotype=protein_coding;locus_tag=AD853_RS01135;old_locus_tag=ERS008462_00232 NZ_CPUY01000001.1 Protein Homology CDS 267966 268376 . - 0 ID=cds-WP_002209255.1;Parent=gene-AD853_RS01135;Dbxref=GenBank:WP_002209255.1;Name=WP_002209255.1;Ontology_term=GO:0006364;gbkey=CDS;gene=rbfA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005175393.1;locus_tag=AD853_RS01135;product=30S ribosome-binding factor RbfA;protein_id=WP_002209255.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 268442 271120 . - . ID=gene-AD853_RS01140;Name=infB;gbkey=Gene;gene=infB;gene_biotype=protein_coding;locus_tag=AD853_RS01140;old_locus_tag=ERS008462_00233 NZ_CPUY01000001.1 Protein Homology CDS 268442 271120 . - 0 ID=cds-WP_038823760.1;Parent=gene-AD853_RS01140;Dbxref=GenBank:WP_038823760.1;Name=WP_038823760.1;Ontology_term=GO:0006413,GO:0003743,GO:0003924,GO:0005525,GO:0005737;gbkey=CDS;gene=infB;go_component=cytoplasm|0005737||IEA;go_function=translation initiation factor activity|0003743||IEA,GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002223151.1;locus_tag=AD853_RS01140;product=translation initiation factor IF-2;protein_id=WP_038823760.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 271145 272632 . - . ID=gene-AD853_RS01145;Name=nusA;gbkey=Gene;gene=nusA;gene_biotype=protein_coding;locus_tag=AD853_RS01145;old_locus_tag=ERS008462_00234 NZ_CPUY01000001.1 Protein Homology CDS 271145 272632 . - 0 ID=cds-WP_002209253.1;Parent=gene-AD853_RS01145;Dbxref=GenBank:WP_002209253.1;Name=WP_002209253.1;Ontology_term=GO:0006353,GO:0003723;gbkey=CDS;gene=nusA;go_function=RNA binding|0003723||IEA;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005131833.1;locus_tag=AD853_RS01145;product=transcription termination factor NusA;protein_id=WP_002209253.1;transl_table=11 NZ_CPUY01000001.1 RefSeq pseudogene 272654 273106 . - . ID=gene-AD853_RS01150;Name=rimP;gbkey=Gene;gene=rimP;gene_biotype=pseudogene;locus_tag=AD853_RS01150;pseudo=true NZ_CPUY01000001.1 Protein Homology CDS 272654 273106 . - 0 ID=cds-AD853_RS01150;Parent=gene-AD853_RS01150;Note=internal stop;Ontology_term=GO:0042274;gbkey=CDS;gene=rimP;go_process=ribosomal small subunit biogenesis|0042274||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004125659.1;locus_tag=AD853_RS01150;product=ribosome maturation factor RimP;pseudo=true;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 273322 273398 . - . ID=gene-AD853_RS01155;Name=AD853_RS01155;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD853_RS01155;old_locus_tag=ERS008462_00237 NZ_CPUY01000001.1 tRNAscan-SE tRNA 273322 273398 . - . ID=rna-AD853_RS01155;Parent=gene-AD853_RS01155;anticodon=(pos:complement(273362..273364));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD853_RS01155;product=tRNA-Met NZ_CPUY01000001.1 tRNAscan-SE exon 273322 273398 . - . ID=exon-AD853_RS01155-1;Parent=rna-AD853_RS01155;anticodon=(pos:complement(273362..273364));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD853_RS01155;product=tRNA-Met NZ_CPUY01000001.1 RefSeq gene 273459 273545 . - . ID=gene-AD853_RS01160;Name=AD853_RS01160;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD853_RS01160;old_locus_tag=ERS008462_00238 NZ_CPUY01000001.1 tRNAscan-SE tRNA 273459 273545 . - . ID=rna-AD853_RS01160;Parent=gene-AD853_RS01160;anticodon=(pos:complement(273509..273511));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD853_RS01160;product=tRNA-Leu NZ_CPUY01000001.1 tRNAscan-SE exon 273459 273545 . - . ID=exon-AD853_RS01160-1;Parent=rna-AD853_RS01160;anticodon=(pos:complement(273509..273511));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD853_RS01160;product=tRNA-Leu NZ_CPUY01000001.1 RefSeq gene 273638 273973 . - . ID=gene-AD853_RS01165;Name=secG;gbkey=Gene;gene=secG;gene_biotype=protein_coding;locus_tag=AD853_RS01165;old_locus_tag=ERS008462_00239 NZ_CPUY01000001.1 Protein Homology CDS 273638 273973 . - 0 ID=cds-WP_002210190.1;Parent=gene-AD853_RS01165;Dbxref=GenBank:WP_002210190.1;Name=WP_002210190.1;Ontology_term=GO:0015739,GO:0015136,GO:0016020;gbkey=CDS;gene=secG;go_component=membrane|0016020||IEA;go_function=sialic acid transmembrane transporter activity|0015136||IEA;go_process=sialic acid transport|0015739||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462204.1;locus_tag=AD853_RS01165;product=preprotein translocase subunit SecG;protein_id=WP_002210190.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 274196 275536 . - . ID=gene-AD853_RS01170;Name=glmM;gbkey=Gene;gene=glmM;gene_biotype=protein_coding;locus_tag=AD853_RS01170;old_locus_tag=ERS008462_00240 NZ_CPUY01000001.1 Protein Homology CDS 274196 275536 . - 0 ID=cds-WP_002210189.1;Parent=gene-AD853_RS01170;Dbxref=GenBank:WP_002210189.1;Name=WP_002210189.1;Ontology_term=GO:0005975,GO:0000287,GO:0008966,GO:0016868;gbkey=CDS;gene=glmM;go_function=magnesium ion binding|0000287||IEA,phosphoglucosamine mutase activity|0008966||IEA,intramolecular phosphotransferase activity|0016868||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011148609.1;locus_tag=AD853_RS01170;product=phosphoglucosamine mutase;protein_id=WP_002210189.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 275546 276379 . - . ID=gene-AD853_RS01175;Name=folP;gbkey=Gene;gene=folP;gene_biotype=protein_coding;locus_tag=AD853_RS01175;old_locus_tag=ERS008462_00241 NZ_CPUY01000001.1 Protein Homology CDS 275546 276379 . - 0 ID=cds-WP_011191630.1;Parent=gene-AD853_RS01175;Dbxref=GenBank:WP_011191630.1;Name=WP_011191630.1;Ontology_term=GO:0004156;gbkey=CDS;gene=folP;go_function=dihydropteroate synthase activity|0004156||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004389228.1;locus_tag=AD853_RS01175;product=dihydropteroate synthase;protein_id=WP_011191630.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 276499 278433 . - . ID=gene-AD853_RS01180;Name=ftsH;gbkey=Gene;gene=ftsH;gene_biotype=protein_coding;locus_tag=AD853_RS01180;old_locus_tag=ERS008462_00242 NZ_CPUY01000001.1 Protein Homology CDS 276499 278433 . - 0 ID=cds-WP_002228195.1;Parent=gene-AD853_RS01180;Dbxref=GenBank:WP_002228195.1;Name=WP_002228195.1;Ontology_term=GO:0006508,GO:0004176,GO:0004222;gbkey=CDS;gene=ftsH;go_function=ATP-dependent peptidase activity|0004176||IEA,metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229027.1;locus_tag=AD853_RS01180;product=ATP-dependent zinc metalloprotease FtsH;protein_id=WP_002228195.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 278490 279119 . - . ID=gene-AD853_RS01185;Name=rlmE;gbkey=Gene;gene=rlmE;gene_biotype=protein_coding;locus_tag=AD853_RS01185;old_locus_tag=ERS008462_00243 NZ_CPUY01000001.1 Protein Homology CDS 278490 279119 . - 0 ID=cds-WP_002228196.1;Parent=gene-AD853_RS01185;Dbxref=GenBank:WP_002228196.1;Name=WP_002228196.1;Ontology_term=GO:0001510,GO:0006364,GO:0016436;gbkey=CDS;gene=rlmE;go_function=rRNA (uridine) methyltransferase activity|0016436||IEA;go_process=RNA methylation|0001510||IEA,rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005156285.1;locus_tag=AD853_RS01185;product=23S rRNA (uridine(2552)-2'-O)-methyltransferase RlmE;protein_id=WP_002228196.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 279266 279559 . + . ID=gene-AD853_RS01190;Name=yhbY;gbkey=Gene;gene=yhbY;gene_biotype=protein_coding;locus_tag=AD853_RS01190;old_locus_tag=ERS008462_00244 NZ_CPUY01000001.1 Protein Homology CDS 279266 279559 . + 0 ID=cds-WP_002210185.1;Parent=gene-AD853_RS01190;Dbxref=GenBank:WP_002210185.1;Name=WP_002210185.1;gbkey=CDS;gene=yhbY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210185.1;locus_tag=AD853_RS01190;product=ribosome assembly RNA-binding protein YhbY;protein_id=WP_002210185.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 279687 280163 . - . ID=gene-AD853_RS01195;Name=greA;gbkey=Gene;gene=greA;gene_biotype=protein_coding;locus_tag=AD853_RS01195;old_locus_tag=ERS008462_00245 NZ_CPUY01000001.1 Protein Homology CDS 279687 280163 . - 0 ID=cds-WP_002210184.1;Parent=gene-AD853_RS01195;Dbxref=GenBank:WP_002210184.1;Name=WP_002210184.1;Ontology_term=GO:0032784,GO:0003677,GO:0070063;gbkey=CDS;gene=greA;go_function=DNA binding|0003677||IEA,RNA polymerase binding|0070063||IEA;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006178768.1;locus_tag=AD853_RS01195;product=transcription elongation factor GreA;protein_id=WP_002210184.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 280421 281869 . + . ID=gene-AD853_RS01200;Name=dacB;gbkey=Gene;gene=dacB;gene_biotype=protein_coding;locus_tag=AD853_RS01200;old_locus_tag=ERS008462_00247 NZ_CPUY01000001.1 Protein Homology CDS 280421 281869 . + 0 ID=cds-WP_038825047.1;Parent=gene-AD853_RS01200;Dbxref=GenBank:WP_038825047.1;Name=WP_038825047.1;Ontology_term=GO:0006508,GO:0004185;gbkey=CDS;gene=dacB;go_function=serine-type carboxypeptidase activity|0004185||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004720377.1;locus_tag=AD853_RS01200;product=serine-type D-Ala-D-Ala carboxypeptidase;protein_id=WP_038825047.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 281875 282537 . + . ID=gene-AD853_RS01205;Name=pmrA;gbkey=Gene;gene=pmrA;gene_biotype=protein_coding;locus_tag=AD853_RS01205;old_locus_tag=ERS008462_00248 NZ_CPUY01000001.1 Protein Homology CDS 281875 282537 . + 0 ID=cds-WP_002210183.1;Parent=gene-AD853_RS01205;Dbxref=GenBank:WP_002210183.1;Name=WP_002210183.1;gbkey=CDS;gene=pmrA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210183.1;locus_tag=AD853_RS01205;product=two-component system response regulator PmrA;protein_id=WP_002210183.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 282534 283601 . + . ID=gene-AD853_RS01210;Name=pmrB;gbkey=Gene;gene=pmrB;gene_biotype=protein_coding;locus_tag=AD853_RS01210;old_locus_tag=ERS008462_00249 NZ_CPUY01000001.1 Protein Homology CDS 282534 283601 . + 0 ID=cds-WP_002210182.1;Parent=gene-AD853_RS01210;Dbxref=GenBank:WP_002210182.1;Name=WP_002210182.1;gbkey=CDS;gene=pmrB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002227439.1;locus_tag=AD853_RS01210;product=two-component system sensor histidine kinase PmrB;protein_id=WP_002210182.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 283696 284868 . - . ID=gene-AD853_RS01215;Name=cgtA;gbkey=Gene;gene=cgtA;gene_biotype=protein_coding;locus_tag=AD853_RS01215;old_locus_tag=ERS008462_00250 NZ_CPUY01000001.1 Protein Homology CDS 283696 284868 . - 0 ID=cds-WP_002210181.1;Parent=gene-AD853_RS01215;Dbxref=GenBank:WP_002210181.1;Name=WP_002210181.1;Ontology_term=GO:0000287,GO:0003924,GO:0005525;gbkey=CDS;gene=cgtA;go_function=magnesium ion binding|0000287||IEA,GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210181.1;locus_tag=AD853_RS01215;product=Obg family GTPase CgtA;protein_id=WP_002210181.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 284869 285855 . - . ID=gene-AD853_RS01220;Name=AD853_RS01220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS01220;old_locus_tag=ERS008462_00251 NZ_CPUY01000001.1 Protein Homology CDS 284869 285855 . - 0 ID=cds-WP_002210180.1;Parent=gene-AD853_RS01220;Dbxref=GenBank:WP_002210180.1;Name=WP_002210180.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210180.1;locus_tag=AD853_RS01220;product=DMT family transporter;protein_id=WP_002210180.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 285943 286200 . - . ID=gene-AD853_RS01225;Name=rpmA;gbkey=Gene;gene=rpmA;gene_biotype=protein_coding;locus_tag=AD853_RS01225;old_locus_tag=ERS008462_00252 NZ_CPUY01000001.1 Protein Homology CDS 285943 286200 . - 0 ID=cds-WP_002210179.1;Parent=gene-AD853_RS01225;Dbxref=GenBank:WP_002210179.1;Name=WP_002210179.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmA;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004933559.1;locus_tag=AD853_RS01225;product=50S ribosomal protein L27;protein_id=WP_002210179.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 286220 286531 . - . ID=gene-AD853_RS01230;Name=rplU;gbkey=Gene;gene=rplU;gene_biotype=protein_coding;locus_tag=AD853_RS01230;old_locus_tag=ERS008462_00253 NZ_CPUY01000001.1 Protein Homology CDS 286220 286531 . - 0 ID=cds-WP_002210178.1;Parent=gene-AD853_RS01230;Dbxref=GenBank:WP_002210178.1;Name=WP_002210178.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rplU;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015960603.1;locus_tag=AD853_RS01230;product=50S ribosomal protein L21;protein_id=WP_002210178.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 286791 287762 . + . ID=gene-AD853_RS01235;Name=ispB;gbkey=Gene;gene=ispB;gene_biotype=protein_coding;locus_tag=AD853_RS01235;old_locus_tag=ERS008462_00254 NZ_CPUY01000001.1 Protein Homology CDS 286791 287762 . + 0 ID=cds-WP_002210177.1;Parent=gene-AD853_RS01235;Dbxref=GenBank:WP_002210177.1;Name=WP_002210177.1;Ontology_term=GO:0008299;gbkey=CDS;gene=ispB;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011191628.1;locus_tag=AD853_RS01235;product=octaprenyl diphosphate synthase;protein_id=WP_002210177.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 287859 288206 . - . ID=gene-AD853_RS01240;Name=AD853_RS01240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS01240;old_locus_tag=ERS008462_00255 NZ_CPUY01000001.1 Protein Homology CDS 287859 288206 . - 0 ID=cds-WP_002210176.1;Parent=gene-AD853_RS01240;Dbxref=GenBank:WP_002210176.1;Name=WP_002210176.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210176.1;locus_tag=AD853_RS01240;product=DNA-binding protein;protein_id=WP_002210176.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 288389 288664 . + . ID=gene-AD853_RS01245;Name=AD853_RS01245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS01245;old_locus_tag=ERS008462_00256 NZ_CPUY01000001.1 Protein Homology CDS 288389 288664 . + 0 ID=cds-WP_002210175.1;Parent=gene-AD853_RS01245;Dbxref=GenBank:WP_002210175.1;Name=WP_002210175.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004723007.1;locus_tag=AD853_RS01245;product=helix-turn-helix domain-containing protein;protein_id=WP_002210175.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 289098 290036 . - . ID=gene-AD853_RS01250;Name=mdh;gbkey=Gene;gene=mdh;gene_biotype=protein_coding;locus_tag=AD853_RS01250;old_locus_tag=ERS008462_00257 NZ_CPUY01000001.1 Protein Homology CDS 289098 290036 . - 0 ID=cds-WP_002210174.1;Parent=gene-AD853_RS01250;Dbxref=GenBank:WP_002210174.1;Name=WP_002210174.1;Ontology_term=GO:0006099,GO:0030060;gbkey=CDS;gene=mdh;go_function=L-malate dehydrogenase (NAD+) activity|0030060||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000861594.1;locus_tag=AD853_RS01250;product=malate dehydrogenase;protein_id=WP_002210174.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 290500 290970 . + . ID=gene-AD853_RS01255;Name=argR;gbkey=Gene;gene=argR;gene_biotype=protein_coding;locus_tag=AD853_RS01255;old_locus_tag=ERS008462_00258 NZ_CPUY01000001.1 Protein Homology CDS 290500 290970 . + 0 ID=cds-WP_002210173.1;Parent=gene-AD853_RS01255;Dbxref=GenBank:WP_002210173.1;Name=WP_002210173.1;gbkey=CDS;gene=argR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210173.1;locus_tag=AD853_RS01255;product=transcriptional regulator ArgR;protein_id=WP_002210173.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 291359 291622 . + . ID=gene-AD853_RS01260;Name=yhcN;gbkey=Gene;gene=yhcN;gene_biotype=protein_coding;locus_tag=AD853_RS01260;old_locus_tag=ERS008462_00259 NZ_CPUY01000001.1 Protein Homology CDS 291359 291622 . + 0 ID=cds-WP_038824922.1;Parent=gene-AD853_RS01260;Dbxref=GenBank:WP_038824922.1;Name=WP_038824922.1;gbkey=CDS;gene=yhcN;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210172.1;locus_tag=AD853_RS01260;product=peroxide/acid stress response protein YhcN;protein_id=WP_038824922.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 291918 293303 . - . ID=gene-AD853_RS01270;Name=mpl;gbkey=Gene;gene=mpl;gene_biotype=protein_coding;locus_tag=AD853_RS01270;old_locus_tag=ERS008462_00260 NZ_CPUY01000001.1 Protein Homology CDS 291918 293303 . - 0 ID=cds-WP_011191627.1;Parent=gene-AD853_RS01270;Dbxref=GenBank:WP_011191627.1;Name=WP_011191627.1;Ontology_term=GO:0009252,GO:0071555,GO:0016881;gbkey=CDS;gene=mpl;go_function=acid-amino acid ligase activity|0016881||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011191627.1;locus_tag=AD853_RS01270;product=UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase;protein_id=WP_011191627.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 293474 294487 . + . ID=gene-AD853_RS01275;Name=fbp;gbkey=Gene;gene=fbp;gene_biotype=protein_coding;locus_tag=AD853_RS01275;old_locus_tag=ERS008462_00261 NZ_CPUY01000001.1 Protein Homology CDS 293474 294487 . + 0 ID=cds-WP_011191626.1;Parent=gene-AD853_RS01275;Dbxref=GenBank:WP_011191626.1;Name=WP_011191626.1;Ontology_term=GO:0005975,GO:0042132;gbkey=CDS;gene=fbp;go_function=fructose 1%2C6-bisphosphate 1-phosphatase activity|0042132||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004875434.1;locus_tag=AD853_RS01275;product=class 1 fructose-bisphosphatase;protein_id=WP_011191626.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 294687 295214 . + . ID=gene-AD853_RS01280;Name=ppa;gbkey=Gene;gene=ppa;gene_biotype=protein_coding;locus_tag=AD853_RS01280;old_locus_tag=ERS008462_00262 NZ_CPUY01000001.1 Protein Homology CDS 294687 295214 . + 0 ID=cds-WP_002210169.1;Parent=gene-AD853_RS01280;Dbxref=GenBank:WP_002210169.1;Name=WP_002210169.1;Ontology_term=GO:0006796,GO:0004427;gbkey=CDS;gene=ppa;go_function=inorganic diphosphate phosphatase activity|0004427||IEA;go_process=phosphate-containing compound metabolic process|0006796||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005134479.1;locus_tag=AD853_RS01280;product=inorganic diphosphatase;protein_id=WP_002210169.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 295332 295688 . - . ID=gene-AD853_RS01285;Name=AD853_RS01285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS01285;old_locus_tag=ERS008462_00263 NZ_CPUY01000001.1 Protein Homology CDS 295332 295688 . - 0 ID=cds-WP_002210168.1;Parent=gene-AD853_RS01285;Dbxref=GenBank:WP_002210168.1;Name=WP_002210168.1;Ontology_term=GO:0061929;gbkey=CDS;go_function=gamma-glutamylaminecyclotransferase activity|0061929||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210168.1;locus_tag=AD853_RS01285;product=gamma-glutamylcyclotransferase family protein;protein_id=WP_002210168.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 295691 299566 . - . ID=gene-AD853_RS01290;Name=tamB;gbkey=Gene;gene=tamB;gene_biotype=protein_coding;locus_tag=AD853_RS01290;old_locus_tag=ERS008462_00264 NZ_CPUY01000001.1 Protein Homology CDS 295691 299566 . - 0 ID=cds-WP_038824846.1;Parent=gene-AD853_RS01290;Dbxref=GenBank:WP_038824846.1;Name=WP_038824846.1;Ontology_term=GO:0009306,GO:0089705;gbkey=CDS;gene=tamB;go_process=protein secretion|0009306||IEA,protein localization to outer membrane|0089705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210167.1;locus_tag=AD853_RS01290;product=autotransporter assembly complex protein TamB;protein_id=WP_038824846.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 299563 301299 . - . ID=gene-AD853_RS01295;Name=tamA;gbkey=Gene;gene=tamA;gene_biotype=protein_coding;locus_tag=AD853_RS01295;old_locus_tag=ERS008462_00265 NZ_CPUY01000001.1 Protein Homology CDS 299563 301299 . - 0 ID=cds-WP_002210166.1;Parent=gene-AD853_RS01295;Dbxref=GenBank:WP_002210166.1;Name=WP_002210166.1;Ontology_term=GO:0009306,GO:0089705;gbkey=CDS;gene=tamA;go_process=protein secretion|0009306||IEA,protein localization to outer membrane|0089705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011191624.1;locus_tag=AD853_RS01295;product=autotransporter assembly complex protein TamA;protein_id=WP_002210166.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 301574 302212 . + . ID=gene-AD853_RS01300;Name=msrA;gbkey=Gene;gene=msrA;gene_biotype=protein_coding;locus_tag=AD853_RS01300;old_locus_tag=ERS008462_00266 NZ_CPUY01000001.1 Protein Homology CDS 301574 302212 . + 0 ID=cds-WP_038824845.1;Parent=gene-AD853_RS01300;Dbxref=GenBank:WP_038824845.1;Name=WP_038824845.1;Ontology_term=GO:0006979,GO:0030091,GO:0008113,GO:0033744;gbkey=CDS;gene=msrA;go_function=peptide-methionine (S)-S-oxide reductase activity|0008113||IEA,L-methionine (S)-S-oxide reductase activity|0033744||IEA;go_process=response to oxidative stress|0006979||IEA,protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210165.1;locus_tag=AD853_RS01300;product=peptide-methionine (S)-S-oxide reductase MsrA;protein_id=WP_038824845.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 302490 303821 . + . ID=gene-AD853_RS01305;Name=paeA;gbkey=Gene;gene=paeA;gene_biotype=protein_coding;gene_synonym=ytfL;locus_tag=AD853_RS01305;old_locus_tag=ERS008462_00267 NZ_CPUY01000001.1 Protein Homology CDS 302490 303821 . + 0 ID=cds-WP_002210164.1;Parent=gene-AD853_RS01305;Dbxref=GenBank:WP_002210164.1;Name=WP_002210164.1;Ontology_term=GO:0050660;gbkey=CDS;gene=paeA;go_function=flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012230150.1;locus_tag=AD853_RS01305;product=polyamine export protein PaeA;protein_id=WP_002210164.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 303929 304141 . - . ID=gene-AD853_RS01310;Name=AD853_RS01310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS01310;old_locus_tag=ERS008462_00268 NZ_CPUY01000001.1 Protein Homology CDS 303929 304141 . - 0 ID=cds-WP_002210163.1;Parent=gene-AD853_RS01310;Dbxref=GenBank:WP_002210163.1;Name=WP_002210163.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210163.1;locus_tag=AD853_RS01310;product=DUF1107 domain-containing protein;protein_id=WP_002210163.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 304477 305040 . + . ID=gene-AD853_RS01315;Name=AD853_RS01315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS01315;old_locus_tag=ERS008462_00269 NZ_CPUY01000001.1 Protein Homology CDS 304477 305040 . + 0 ID=cds-WP_002210162.1;Parent=gene-AD853_RS01315;Dbxref=GenBank:WP_002210162.1;Name=WP_002210162.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002223134.1;locus_tag=AD853_RS01315;product=YtfJ family protein;protein_id=WP_002210162.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 305043 305783 . - . ID=gene-AD853_RS01320;Name=cysQ;gbkey=Gene;gene=cysQ;gene_biotype=protein_coding;locus_tag=AD853_RS01320;old_locus_tag=ERS008462_00270 NZ_CPUY01000001.1 Protein Homology CDS 305043 305783 . - 0 ID=cds-WP_002220539.1;Parent=gene-AD853_RS01320;Dbxref=GenBank:WP_002220539.1;Name=WP_002220539.1;Ontology_term=GO:0000287,GO:0008441;gbkey=CDS;gene=cysQ;go_function=magnesium ion binding|0000287||IEA,3'(2')%2C5'-bisphosphate nucleotidase activity|0008441||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463265.1;locus_tag=AD853_RS01320;product=3'(2')%2C5'-bisphosphate nucleotidase CysQ;protein_id=WP_002220539.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 306236 308206 . + . ID=gene-AD853_RS01325;Name=AD853_RS01325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS01325;old_locus_tag=ERS008462_00271 NZ_CPUY01000001.1 Protein Homology CDS 306236 308206 . + 0 ID=cds-WP_038824844.1;Parent=gene-AD853_RS01325;Dbxref=GenBank:WP_038824844.1;Name=WP_038824844.1;Ontology_term=GO:0009166,GO:0000166,GO:0008663,GO:0016788;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,2'%2C3'-cyclic-nucleotide 2'-phosphodiesterase activity|0008663||IEA,hydrolase activity%2C acting on ester bonds|0016788||IEA;go_process=nucleotide catabolic process|0009166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011191622.1;locus_tag=AD853_RS01325;product=bifunctional 2'%2C3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase;protein_id=WP_038824844.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 308335 309000 . + . ID=gene-AD853_RS01330;Name=ytfE;gbkey=Gene;gene=ytfE;gene_biotype=protein_coding;locus_tag=AD853_RS01330;old_locus_tag=ERS008462_00272 NZ_CPUY01000001.1 Protein Homology CDS 308335 309000 . + 0 ID=cds-WP_011191621.1;Parent=gene-AD853_RS01330;Dbxref=GenBank:WP_011191621.1;Name=WP_011191621.1;gbkey=CDS;gene=ytfE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011191621.1;locus_tag=AD853_RS01330;product=iron-sulfur cluster repair protein YtfE;protein_id=WP_011191621.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 309098 309718 . - . ID=gene-AD853_RS01335;Name=AD853_RS01335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS01335;old_locus_tag=ERS008462_00273 NZ_CPUY01000001.1 Protein Homology CDS 309098 309718 . - 0 ID=cds-WP_011191620.1;Parent=gene-AD853_RS01335;Dbxref=GenBank:WP_011191620.1;Name=WP_011191620.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015742582.1;locus_tag=AD853_RS01335;product=peptidylprolyl isomerase;protein_id=WP_011191620.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 310036 310776 . + . ID=gene-AD853_RS01340;Name=AD853_RS01340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS01340;old_locus_tag=ERS008462_00274 NZ_CPUY01000001.1 Protein Homology CDS 310036 310776 . + 0 ID=cds-WP_002210158.1;Parent=gene-AD853_RS01340;Dbxref=GenBank:WP_002210158.1;Name=WP_002210158.1;Ontology_term=GO:0042834;gbkey=CDS;go_function=peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002396228.1;locus_tag=AD853_RS01340;product=LysM-like peptidoglycan-binding domain-containing protein;protein_id=WP_002210158.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 310916 311371 . + . ID=gene-AD853_RS01345;Name=AD853_RS01345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS01345;old_locus_tag=ERS008462_00275 NZ_CPUY01000001.1 Protein Homology CDS 310916 311371 . + 0 ID=cds-WP_002210157.1;Parent=gene-AD853_RS01345;Dbxref=GenBank:WP_002210157.1;Name=WP_002210157.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210157.1;locus_tag=AD853_RS01345;product=DUF3757 domain-containing protein;protein_id=WP_002210157.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 311437 311889 . - . ID=gene-AD853_RS01350;Name=rplI;gbkey=Gene;gene=rplI;gene_biotype=protein_coding;locus_tag=AD853_RS01350;old_locus_tag=ERS008462_00276 NZ_CPUY01000001.1 Protein Homology CDS 311437 311889 . - 0 ID=cds-WP_002210156.1;Parent=gene-AD853_RS01350;Dbxref=GenBank:WP_002210156.1;Name=WP_002210156.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplI;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004699845.1;locus_tag=AD853_RS01350;product=50S ribosomal protein L9;protein_id=WP_002210156.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 311929 312156 . - . ID=gene-AD853_RS01355;Name=rpsR;gbkey=Gene;gene=rpsR;gene_biotype=protein_coding;locus_tag=AD853_RS01355;old_locus_tag=ERS008462_00277 NZ_CPUY01000001.1 Protein Homology CDS 311929 312156 . - 0 ID=cds-WP_002210155.1;Parent=gene-AD853_RS01355;Dbxref=GenBank:WP_002210155.1;Name=WP_002210155.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsR;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012986941.1;locus_tag=AD853_RS01355;product=30S ribosomal protein S18;protein_id=WP_002210155.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 312161 312481 . - . ID=gene-AD853_RS01360;Name=priB;gbkey=Gene;gene=priB;gene_biotype=protein_coding;locus_tag=AD853_RS01360 NZ_CPUY01000001.1 Protein Homology CDS 312161 312481 . - 0 ID=cds-WP_072080724.1;Parent=gene-AD853_RS01360;Dbxref=GenBank:WP_072080724.1;Name=WP_072080724.1;Ontology_term=GO:0006260,GO:0003697,GO:0030894;gbkey=CDS;gene=priB;go_component=replisome|0030894||IEA;go_function=single-stranded DNA binding|0003697||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009111556.1;locus_tag=AD853_RS01360;product=primosomal replication protein N;protein_id=WP_072080724.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 312487 312879 . - . ID=gene-AD853_RS01365;Name=rpsF;gbkey=Gene;gene=rpsF;gene_biotype=protein_coding;locus_tag=AD853_RS01365;old_locus_tag=ERS008462_00278 NZ_CPUY01000001.1 Protein Homology CDS 312487 312879 . - 0 ID=cds-WP_002210153.1;Parent=gene-AD853_RS01365;Dbxref=GenBank:WP_002210153.1;Name=WP_002210153.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsF;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020456251.1;locus_tag=AD853_RS01365;product=30S ribosomal protein S6;protein_id=WP_002210153.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 312893 313171 . - . ID=gene-AD853_RS22410;Name=AD853_RS22410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS22410;old_locus_tag=ERS008462_00279 NZ_CPUY01000001.1 Protein Homology CDS 312893 313171 . - 0 ID=cds-WP_011191619.1;Parent=gene-AD853_RS22410;Dbxref=GenBank:WP_011191619.1;Name=WP_011191619.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011191619.1;locus_tag=AD853_RS22410;product=hypothetical protein;protein_id=WP_011191619.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 313246 313995 . - . ID=gene-AD853_RS01375;Name=yjfP;gbkey=Gene;gene=yjfP;gene_biotype=protein_coding;locus_tag=AD853_RS01375;old_locus_tag=ERS008462_00280 NZ_CPUY01000001.1 Protein Homology CDS 313246 313995 . - 0 ID=cds-WP_038824843.1;Parent=gene-AD853_RS01375;Dbxref=GenBank:WP_038824843.1;Name=WP_038824843.1;Ontology_term=GO:0006508,GO:0008236;gbkey=CDS;gene=yjfP;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005156392.1;locus_tag=AD853_RS01375;product=esterase;protein_id=WP_038824843.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 314258 314497 . + . ID=gene-AD853_RS01380;Name=bsmA;gbkey=Gene;gene=bsmA;gene_biotype=protein_coding;locus_tag=AD853_RS01380;old_locus_tag=ERS008462_00281 NZ_CPUY01000001.1 Protein Homology CDS 314258 314497 . + 0 ID=cds-WP_306415653.1;Parent=gene-AD853_RS01380;Dbxref=GenBank:WP_306415653.1;Name=WP_306415653.1;gbkey=CDS;gene=bsmA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005175485.1;locus_tag=AD853_RS01380;product=biofilm peroxide resistance protein BsmA;protein_id=WP_306415653.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 314569 316200 . - . ID=gene-AD853_RS01385;Name=AD853_RS01385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS01385;old_locus_tag=ERS008462_00282 NZ_CPUY01000001.1 Protein Homology CDS 314569 316200 . - 0 ID=cds-WP_038824848.1;Parent=gene-AD853_RS01385;Dbxref=GenBank:WP_038824848.1;Name=WP_038824848.1;Ontology_term=GO:0003995;gbkey=CDS;go_function=acyl-CoA dehydrogenase activity|0003995||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002353634.1;locus_tag=AD853_RS01385;product=isovaleryl-CoA dehydrogenase;protein_id=WP_038824848.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 316620 317360 . - . ID=gene-AD853_RS01390;Name=rlmB;gbkey=Gene;gene=rlmB;gene_biotype=protein_coding;locus_tag=AD853_RS01390;old_locus_tag=ERS008462_00283 NZ_CPUY01000001.1 Protein Homology CDS 316620 317360 . - 0 ID=cds-WP_002209161.1;Parent=gene-AD853_RS01390;Dbxref=GenBank:WP_002209161.1;Name=WP_002209161.1;Ontology_term=GO:0006396,GO:0003723,GO:0008173;gbkey=CDS;gene=rlmB;go_function=RNA binding|0003723||IEA,RNA methyltransferase activity|0008173||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209161.1;locus_tag=AD853_RS01390;product=23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB;protein_id=WP_002209161.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 317479 320013 . - . ID=gene-AD853_RS01395;Name=rnr;gbkey=Gene;gene=rnr;gene_biotype=protein_coding;locus_tag=AD853_RS01395;old_locus_tag=ERS008462_00284 NZ_CPUY01000001.1 Protein Homology CDS 317479 320013 . - 0 ID=cds-WP_002209159.1;Parent=gene-AD853_RS01395;Dbxref=GenBank:WP_002209159.1;Name=WP_002209159.1;Ontology_term=GO:0016070,GO:0004540;gbkey=CDS;gene=rnr;go_function=RNA nuclease activity|0004540||IEA;go_process=RNA metabolic process|0016070||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012413448.1;locus_tag=AD853_RS01395;product=ribonuclease R;protein_id=WP_002209159.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 320254 320679 . - . ID=gene-AD853_RS01400;Name=nsrR;gbkey=Gene;gene=nsrR;gene_biotype=protein_coding;locus_tag=AD853_RS01400;old_locus_tag=ERS008462_00285 NZ_CPUY01000001.1 Protein Homology CDS 320254 320679 . - 0 ID=cds-WP_002217229.1;Parent=gene-AD853_RS01400;Dbxref=GenBank:WP_002217229.1;Name=WP_002217229.1;gbkey=CDS;gene=nsrR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005134424.1;locus_tag=AD853_RS01400;product=nitric oxide-sensing transcriptional repressor NsrR;protein_id=WP_002217229.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 321068 322366 . - . ID=gene-AD853_RS01405;Name=AD853_RS01405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS01405;old_locus_tag=ERS008462_00286 NZ_CPUY01000001.1 Protein Homology CDS 321068 322366 . - 0 ID=cds-WP_002209157.1;Parent=gene-AD853_RS01405;Dbxref=GenBank:WP_002209157.1;Name=WP_002209157.1;Ontology_term=GO:0006164,GO:0004019,GO:0005525;gbkey=CDS;go_function=adenylosuccinate synthase activity|0004019||IEA,GTP binding|0005525||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019842885.1;locus_tag=AD853_RS01405;product=adenylosuccinate synthase;protein_id=WP_002209157.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 322466 322666 . - . ID=gene-AD853_RS01410;Name=AD853_RS01410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS01410;old_locus_tag=ERS008462_00287 NZ_CPUY01000001.1 Protein Homology CDS 322466 322666 . - 0 ID=cds-WP_038825032.1;Parent=gene-AD853_RS01410;Dbxref=GenBank:WP_038825032.1;Name=WP_038825032.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002217227.1;locus_tag=AD853_RS01410;product=DUF2065 domain-containing protein;protein_id=WP_038825032.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 322838 323842 . - . ID=gene-AD853_RS01415;Name=hflC;gbkey=Gene;gene=hflC;gene_biotype=protein_coding;locus_tag=AD853_RS01415;old_locus_tag=ERS008462_00288 NZ_CPUY01000001.1 Protein Homology CDS 322838 323842 . - 0 ID=cds-WP_002209155.1;Parent=gene-AD853_RS01415;Dbxref=GenBank:WP_002209155.1;Name=WP_002209155.1;gbkey=CDS;gene=hflC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004875464.1;locus_tag=AD853_RS01415;product=protease modulator HflC;protein_id=WP_002209155.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 323846 325105 . - . ID=gene-AD853_RS01420;Name=hflK;gbkey=Gene;gene=hflK;gene_biotype=protein_coding;locus_tag=AD853_RS01420;old_locus_tag=ERS008462_00289 NZ_CPUY01000001.1 Protein Homology CDS 323846 325105 . - 0 ID=cds-WP_002209154.1;Parent=gene-AD853_RS01420;Dbxref=GenBank:WP_002209154.1;Name=WP_002209154.1;Ontology_term=GO:0016020;gbkey=CDS;gene=hflK;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209154.1;locus_tag=AD853_RS01420;product=FtsH protease activity modulator HflK;protein_id=WP_002209154.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 325346 326632 . - . ID=gene-AD853_RS01425;Name=hflX;gbkey=Gene;gene=hflX;gene_biotype=protein_coding;locus_tag=AD853_RS01425;old_locus_tag=ERS008462_00290 NZ_CPUY01000001.1 Protein Homology CDS 325346 326632 . - 0 ID=cds-WP_002209152.1;Parent=gene-AD853_RS01425;Dbxref=GenBank:WP_002209152.1;Name=WP_002209152.1;Ontology_term=GO:0005525;gbkey=CDS;gene=hflX;go_function=GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105752.1;locus_tag=AD853_RS01425;product=ribosome rescue GTPase HflX;protein_id=WP_002209152.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 326731 327036 . - . ID=gene-AD853_RS01430;Name=hfq;gbkey=Gene;gene=hfq;gene_biotype=protein_coding;locus_tag=AD853_RS01430;old_locus_tag=ERS008462_00291 NZ_CPUY01000001.1 Protein Homology CDS 326731 327036 . - 0 ID=cds-WP_002209151.1;Parent=gene-AD853_RS01430;Dbxref=GenBank:WP_002209151.1;Name=WP_002209151.1;Ontology_term=GO:0006355,GO:0003723;gbkey=CDS;gene=hfq;go_function=RNA binding|0003723||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209151.1;locus_tag=AD853_RS01430;product=RNA chaperone Hfq;protein_id=WP_002209151.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 327153 328094 . - . ID=gene-AD853_RS01435;Name=miaA;gbkey=Gene;gene=miaA;gene_biotype=protein_coding;locus_tag=AD853_RS01435;old_locus_tag=ERS008462_00292 NZ_CPUY01000001.1 Protein Homology CDS 327153 328094 . - 0 ID=cds-WP_038825033.1;Parent=gene-AD853_RS01435;Dbxref=GenBank:WP_038825033.1;Name=WP_038825033.1;Ontology_term=GO:0006400,GO:0052381,GO:0005737;gbkey=CDS;gene=miaA;go_component=cytoplasm|0005737||IEA;go_function=tRNA dimethylallyltransferase activity|0052381||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011095429.1;locus_tag=AD853_RS01435;product=tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA;protein_id=WP_038825033.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 328087 329994 . - . ID=gene-AD853_RS01440;Name=mutL;gbkey=Gene;gene=mutL;gene_biotype=protein_coding;locus_tag=AD853_RS01440;old_locus_tag=ERS008462_00293 NZ_CPUY01000001.1 Protein Homology CDS 328087 329994 . - 0 ID=cds-WP_038825034.1;Parent=gene-AD853_RS01440;Dbxref=GenBank:WP_038825034.1;Name=WP_038825034.1;Ontology_term=GO:0006298,GO:0005524,GO:0016887,GO:0030983,GO:0032300;gbkey=CDS;gene=mutL;go_component=mismatch repair complex|0032300||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,mismatched DNA binding|0030983||IEA;go_process=mismatch repair|0006298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209148.1;locus_tag=AD853_RS01440;product=DNA mismatch repair endonuclease MutL;protein_id=WP_038825034.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 330010 331905 . - . ID=gene-AD853_RS01445;Name=amiB;gbkey=Gene;gene=amiB;gene_biotype=protein_coding;locus_tag=AD853_RS01445;old_locus_tag=ERS008462_00294 NZ_CPUY01000001.1 Protein Homology CDS 330010 331905 . - 0 ID=cds-WP_038825036.1;Parent=gene-AD853_RS01445;Dbxref=GenBank:WP_038825036.1;Name=WP_038825036.1;Ontology_term=GO:0009253,GO:0008745;gbkey=CDS;gene=amiB;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012413447.1;locus_tag=AD853_RS01445;product=N-acetylmuramoyl-L-alanine amidase AmiB;protein_id=WP_038825036.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 331913 332383 . - . ID=gene-AD853_RS01450;Name=tsaE;gbkey=Gene;gene=tsaE;gene_biotype=protein_coding;locus_tag=AD853_RS01450;old_locus_tag=ERS008462_00295 NZ_CPUY01000001.1 Protein Homology CDS 331913 332383 . - 0 ID=cds-WP_011191614.1;Parent=gene-AD853_RS01450;Dbxref=GenBank:WP_011191614.1;Name=WP_011191614.1;Ontology_term=GO:0002949;gbkey=CDS;gene=tsaE;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005156441.1;locus_tag=AD853_RS01450;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE;protein_id=WP_011191614.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 332394 333908 . - . ID=gene-AD853_RS01455;Name=nnr;gbkey=Gene;gene=nnr;gene_biotype=protein_coding;locus_tag=AD853_RS01455;old_locus_tag=ERS008462_00296 NZ_CPUY01000001.1 Protein Homology CDS 332394 333908 . - 0 ID=cds-WP_002209145.1;Parent=gene-AD853_RS01455;Dbxref=GenBank:WP_002209145.1;Name=WP_002209145.1;Ontology_term=GO:0052855;gbkey=CDS;gene=nnr;go_function=ADP-dependent NAD(P)H-hydrate dehydratase activity|0052855||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019080720.1;locus_tag=AD853_RS01455;product=bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase;protein_id=WP_002209145.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 333907 335127 . + . ID=gene-AD853_RS01460;Name=queG;gbkey=Gene;gene=queG;gene_biotype=protein_coding;locus_tag=AD853_RS01460;old_locus_tag=ERS008462_00297 NZ_CPUY01000001.1 Protein Homology CDS 333907 335127 . + 0 ID=cds-WP_038826725.1;Parent=gene-AD853_RS01460;Dbxref=GenBank:WP_038826725.1;Name=WP_038826725.1;Ontology_term=GO:0008033,GO:0008616,GO:0051539,GO:0052693;gbkey=CDS;gene=queG;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,epoxyqueuosine reductase activity|0052693||IEA;go_process=tRNA processing|0008033||IEA,tRNA queuosine(34) biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002228676.1;locus_tag=AD853_RS01460;product=tRNA epoxyqueuosine(34) reductase QueG;protein_id=WP_038826725.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 335439 335514 . - . ID=gene-AD853_RS01465;Name=AD853_RS01465;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD853_RS01465;old_locus_tag=ERS008462_00298 NZ_CPUY01000001.1 tRNAscan-SE tRNA 335439 335514 . - . ID=rna-AD853_RS01465;Parent=gene-AD853_RS01465;anticodon=(pos:complement(335479..335481));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD853_RS01465;product=tRNA-Gly NZ_CPUY01000001.1 tRNAscan-SE exon 335439 335514 . - . ID=exon-AD853_RS01465-1;Parent=rna-AD853_RS01465;anticodon=(pos:complement(335479..335481));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD853_RS01465;product=tRNA-Gly NZ_CPUY01000001.1 RefSeq gene 335606 335681 . - . ID=gene-AD853_RS01470;Name=AD853_RS01470;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD853_RS01470;old_locus_tag=ERS008462_00299 NZ_CPUY01000001.1 tRNAscan-SE tRNA 335606 335681 . - . ID=rna-AD853_RS01470;Parent=gene-AD853_RS01470;anticodon=(pos:complement(335646..335648));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD853_RS01470;product=tRNA-Gly NZ_CPUY01000001.1 tRNAscan-SE exon 335606 335681 . - . ID=exon-AD853_RS01470-1;Parent=rna-AD853_RS01470;anticodon=(pos:complement(335646..335648));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD853_RS01470;product=tRNA-Gly NZ_CPUY01000001.1 RefSeq gene 336118 336663 . - . ID=gene-AD853_RS01475;Name=orn;gbkey=Gene;gene=orn;gene_biotype=protein_coding;locus_tag=AD853_RS01475;old_locus_tag=ERS008462_00301 NZ_CPUY01000001.1 Protein Homology CDS 336118 336663 . - 0 ID=cds-WP_038824851.1;Parent=gene-AD853_RS01475;Dbxref=GenBank:WP_038824851.1;Name=WP_038824851.1;Ontology_term=GO:0000175,GO:0003676;gbkey=CDS;gene=orn;go_function=3'-5'-RNA exonuclease activity|0000175||IEA,nucleic acid binding|0003676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004873932.1;locus_tag=AD853_RS01475;product=oligoribonuclease;protein_id=WP_038824851.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 336863 337915 . + . ID=gene-AD853_RS01485;Name=rsgA;gbkey=Gene;gene=rsgA;gene_biotype=protein_coding;locus_tag=AD853_RS01485;old_locus_tag=ERS008462_00302 NZ_CPUY01000001.1 Protein Homology CDS 336863 337915 . + 0 ID=cds-WP_002209142.1;Parent=gene-AD853_RS01485;Dbxref=GenBank:WP_002209142.1;Name=WP_002209142.1;Ontology_term=GO:0003924,GO:0005525;gbkey=CDS;gene=rsgA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005156445.1;locus_tag=AD853_RS01485;product=small ribosomal subunit biogenesis GTPase RsgA;protein_id=WP_002209142.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 338240 339121 . + . ID=gene-AD853_RS01490;Name=asd;gbkey=Gene;gene=asd;gene_biotype=protein_coding;locus_tag=AD853_RS01490;old_locus_tag=ERS008462_00303 NZ_CPUY01000001.1 Protein Homology CDS 338240 339121 . + 0 ID=cds-WP_038824853.1;Parent=gene-AD853_RS01490;Dbxref=GenBank:WP_038824853.1;Name=WP_038824853.1;Note=Phosphatidylserine decarboxylase is synthesized as a single chain precursor. Generation of the pyruvoyl active site from a Ser is coupled to cleavage of a Gly-Ser bond between the larger (beta) and smaller (alpha chains). It is an integral membrane protein.;Ontology_term=GO:0008654,GO:0004609;gbkey=CDS;gene=asd;go_function=phosphatidylserine decarboxylase activity|0004609||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002423325.1;locus_tag=AD853_RS01490;product=archaetidylserine decarboxylase;protein_id=WP_038824853.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 339163 342504 . + . ID=gene-AD853_RS01495;Name=mscM;gbkey=Gene;gene=mscM;gene_biotype=protein_coding;locus_tag=AD853_RS01495;old_locus_tag=ERS008462_00304 NZ_CPUY01000001.1 Protein Homology CDS 339163 342504 . + 0 ID=cds-WP_012413446.1;Parent=gene-AD853_RS01495;Dbxref=GenBank:WP_012413446.1;Name=WP_012413446.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=mscM;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011906457.1;locus_tag=AD853_RS01495;product=miniconductance mechanosensitive channel MscM;protein_id=WP_012413446.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 342625 343602 . - . ID=gene-AD853_RS01500;Name=epmA;gbkey=Gene;gene=epmA;gene_biotype=protein_coding;locus_tag=AD853_RS01500;old_locus_tag=ERS008462_00305 NZ_CPUY01000001.1 Protein Homology CDS 342625 343602 . - 0 ID=cds-WP_002209139.1;Parent=gene-AD853_RS01500;Dbxref=GenBank:WP_002209139.1;Name=WP_002209139.1;Ontology_term=GO:0006418,GO:0004812;gbkey=CDS;gene=epmA;go_function=aminoacyl-tRNA ligase activity|0004812||IEA;go_process=tRNA aminoacylation for protein translation|0006418||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209139.1;locus_tag=AD853_RS01500;product=elongation factor P--(R)-beta-lysine ligase;protein_id=WP_002209139.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 343762 343953 . - . ID=gene-AD853_RS01505;Name=AD853_RS01505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS01505 NZ_CPUY01000001.1 Protein Homology CDS 343762 343953 . - 0 ID=cds-WP_002209138.1;Parent=gene-AD853_RS01505;Dbxref=GenBank:WP_002209138.1;Name=WP_002209138.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209138.1;locus_tag=AD853_RS01505;product=hypothetical protein;protein_id=WP_002209138.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 344060 345883 . + . ID=gene-AD853_RS01510;Name=frdA;gbkey=Gene;gene=frdA;gene_biotype=protein_coding;locus_tag=AD853_RS01510;old_locus_tag=ERS008462_00306 NZ_CPUY01000001.1 Protein Homology CDS 344060 345883 . + 0 ID=cds-WP_038824854.1;Parent=gene-AD853_RS01510;Dbxref=GenBank:WP_038824854.1;Name=WP_038824854.1;Ontology_term=GO:0009061,GO:0022900,GO:0016491,GO:0050660;gbkey=CDS;gene=frdA;go_function=oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=anaerobic respiration|0009061||IEA,electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011815417.1;locus_tag=AD853_RS01510;product=fumarate reductase (quinol) flavoprotein subunit;protein_id=WP_038824854.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 345876 346610 . + . ID=gene-AD853_RS01515;Name=AD853_RS01515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS01515;old_locus_tag=ERS008462_00307 NZ_CPUY01000001.1 Protein Homology CDS 345876 346610 . + 0 ID=cds-WP_002209136.1;Parent=gene-AD853_RS01515;Dbxref=GenBank:WP_002209136.1;Name=WP_002209136.1;Ontology_term=GO:0006099,GO:0009055,GO:0016491,GO:0051536;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,oxidoreductase activity|0016491||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005175554.1;locus_tag=AD853_RS01515;product=succinate dehydrogenase/fumarate reductase iron-sulfur subunit;protein_id=WP_002209136.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 346627 347019 . + . ID=gene-AD853_RS01520;Name=frdC;gbkey=Gene;gene=frdC;gene_biotype=protein_coding;locus_tag=AD853_RS01520;old_locus_tag=ERS008462_00308 NZ_CPUY01000001.1 Protein Homology CDS 346627 347019 . + 0 ID=cds-WP_002209135.1;Parent=gene-AD853_RS01520;Dbxref=GenBank:WP_002209135.1;Name=WP_002209135.1;Ontology_term=GO:0016020;gbkey=CDS;gene=frdC;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005156465.1;locus_tag=AD853_RS01520;product=fumarate reductase subunit FrdC;protein_id=WP_002209135.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 347036 347392 . + . ID=gene-AD853_RS01525;Name=frdD;gbkey=Gene;gene=frdD;gene_biotype=protein_coding;locus_tag=AD853_RS01525;old_locus_tag=ERS008462_00309 NZ_CPUY01000001.1 Protein Homology CDS 347036 347392 . + 0 ID=cds-WP_002209134.1;Parent=gene-AD853_RS01525;Dbxref=GenBank:WP_002209134.1;Name=WP_002209134.1;gbkey=CDS;gene=frdD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304677.1;locus_tag=AD853_RS01525;product=fumarate reductase subunit FrdD;protein_id=WP_002209134.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 347550 347864 . - . ID=gene-AD853_RS01530;Name=sugE;gbkey=Gene;gene=sugE;gene_biotype=protein_coding;locus_tag=AD853_RS01530 NZ_CPUY01000001.1 Protein Homology CDS 347550 347864 . - 0 ID=cds-WP_002228124.1;Parent=gene-AD853_RS01530;Dbxref=GenBank:WP_002228124.1;Name=WP_002228124.1;Ontology_term=GO:0022857,GO:0016020;gbkey=CDS;gene=sugE;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004392447.1;locus_tag=AD853_RS01530;product=quaternary ammonium compound efflux SMR transporter SugE;protein_id=WP_002228124.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 348111 348677 . - . ID=gene-AD853_RS01535;Name=efp;gbkey=Gene;gene=efp;gene_biotype=protein_coding;locus_tag=AD853_RS01535;old_locus_tag=ERS008462_00311 NZ_CPUY01000001.1 Protein Homology CDS 348111 348677 . - 0 ID=cds-WP_002209131.1;Parent=gene-AD853_RS01535;Dbxref=GenBank:WP_002209131.1;Name=WP_002209131.1;Ontology_term=GO:0006414,GO:0003746,GO:0005737;gbkey=CDS;gene=efp;go_component=cytoplasm|0005737||IEA;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004871142.1;locus_tag=AD853_RS01535;product=elongation factor P;protein_id=WP_002209131.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 348713 349741 . + . ID=gene-AD853_RS01540;Name=epmB;gbkey=Gene;gene=epmB;gene_biotype=protein_coding;locus_tag=AD853_RS01540;old_locus_tag=ERS008462_00312 NZ_CPUY01000001.1 Protein Homology CDS 348713 349741 . + 0 ID=cds-WP_002228125.1;Parent=gene-AD853_RS01540;Dbxref=GenBank:WP_002228125.1;Name=WP_002228125.1;gbkey=CDS;gene=epmB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002228125.1;locus_tag=AD853_RS01540;product=EF-P beta-lysylation protein EpmB;protein_id=WP_002228125.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 350213 350557 . - . ID=gene-AD853_RS01545;Name=AD853_RS01545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS01545;old_locus_tag=ERS008462_00313 NZ_CPUY01000001.1 Protein Homology CDS 350213 350557 . - 0 ID=cds-WP_032465615.1;Parent=gene-AD853_RS01545;Dbxref=GenBank:WP_032465615.1;Name=WP_032465615.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005175566.1;locus_tag=AD853_RS01545;product=DUF4156 domain-containing protein;protein_id=WP_032465615.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 350887 351102 . - . ID=gene-AD853_RS22570;Name=AD853_RS22570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS22570 NZ_CPUY01000001.1 Protein Homology CDS 350887 351102 . - 0 ID=cds-WP_002353623.1;Parent=gene-AD853_RS22570;Dbxref=GenBank:WP_002353623.1;Name=WP_002353623.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002353623.1;locus_tag=AD853_RS22570;product=hypothetical protein;protein_id=WP_002353623.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 351236 352882 . - . ID=gene-AD853_RS01550;Name=groL;gbkey=Gene;gene=groL;gene_biotype=protein_coding;locus_tag=AD853_RS01550;old_locus_tag=ERS008462_00314 NZ_CPUY01000001.1 Protein Homology CDS 351236 352882 . - 0 ID=cds-WP_002209128.1;Parent=gene-AD853_RS01550;Dbxref=GenBank:WP_002209128.1;Name=WP_002209128.1;Note=60 kDa chaperone family%3B promotes refolding of misfolded polypeptides especially under stressful conditions%3B forms two stacked rings of heptamers to form a barrel-shaped 14mer%3B ends can be capped by GroES%3B misfolded proteins enter the barrel where they are refolded when GroES binds;Ontology_term=GO:0042026,GO:0140662;gbkey=CDS;gene=groL;go_function=ATP-dependent protein folding chaperone|0140662||IEA;go_process=protein refolding|0042026||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463194.1;locus_tag=AD853_RS01550;product=chaperonin GroEL;protein_id=WP_002209128.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 352929 353222 . - . ID=gene-AD853_RS01555;Name=AD853_RS01555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS01555;old_locus_tag=ERS008462_00315 NZ_CPUY01000001.1 Protein Homology CDS 352929 353222 . - 0 ID=cds-WP_002209127.1;Parent=gene-AD853_RS01555;Dbxref=GenBank:WP_002209127.1;Name=WP_002209127.1;Ontology_term=GO:0005524,GO:0140662;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP-dependent protein folding chaperone|0140662||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004391824.1;locus_tag=AD853_RS01555;product=co-chaperone GroES;protein_id=WP_002209127.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 353477 354040 . - . ID=gene-AD853_RS01560;Name=AD853_RS01560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS01560;old_locus_tag=ERS008462_00316 NZ_CPUY01000001.1 Protein Homology CDS 353477 354040 . - 0 ID=cds-WP_033848959.1;Parent=gene-AD853_RS01560;Dbxref=GenBank:WP_033848959.1;Name=WP_033848959.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209126.1;locus_tag=AD853_RS01560;product=FxsA family protein;protein_id=WP_033848959.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 354488 355924 . + . ID=gene-AD853_RS01565;Name=aspA;gbkey=Gene;gene=aspA;gene_biotype=protein_coding;locus_tag=AD853_RS01565;old_locus_tag=ERS008462_00317 NZ_CPUY01000001.1 Protein Homology CDS 354488 355924 . + 0 ID=cds-WP_002230464.1;Parent=gene-AD853_RS01565;Dbxref=GenBank:WP_002230464.1;Name=WP_002230464.1;Ontology_term=GO:0006520,GO:0008797;gbkey=CDS;gene=aspA;go_function=aspartate ammonia-lyase activity|0008797||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463190.1;locus_tag=AD853_RS01565;product=aspartate ammonia-lyase;protein_id=WP_002230464.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 356044 357345 . + . ID=gene-AD853_RS01570;Name=AD853_RS01570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS01570;old_locus_tag=ERS008462_00318 NZ_CPUY01000001.1 Protein Homology CDS 356044 357345 . + 0 ID=cds-WP_002209123.1;Parent=gene-AD853_RS01570;Dbxref=GenBank:WP_002209123.1;Name=WP_002209123.1;Ontology_term=GO:0015740,GO:0015556,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=C4-dicarboxylate transmembrane transporter activity|0015556||IEA;go_process=C4-dicarboxylate transport|0015740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209123.1;locus_tag=AD853_RS01570;product=anaerobic C4-dicarboxylate transporter;protein_id=WP_002209123.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 357530 357889 . + . ID=gene-AD853_RS01575;Name=cutA;gbkey=Gene;gene=cutA;gene_biotype=protein_coding;locus_tag=AD853_RS01575;old_locus_tag=ERS008462_00319 NZ_CPUY01000001.1 Protein Homology CDS 357530 357889 . + 0 ID=cds-WP_002209122.1;Parent=gene-AD853_RS01575;Dbxref=GenBank:WP_002209122.1;Name=WP_002209122.1;gbkey=CDS;gene=cutA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209122.1;locus_tag=AD853_RS01575;product=divalent cation tolerance protein CutA;protein_id=WP_002209122.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 357865 359688 . + . ID=gene-AD853_RS01580;Name=AD853_RS01580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS01580;old_locus_tag=ERS008462_00320 NZ_CPUY01000001.1 Protein Homology CDS 357865 359688 . + 0 ID=cds-WP_038823821.1;Parent=gene-AD853_RS01580;Dbxref=GenBank:WP_038823821.1;Name=WP_038823821.1;Ontology_term=GO:0017004,GO:0009055,GO:0030554,GO:0047134;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,adenyl nucleotide binding|0030554||IEA,protein-disulfide reductase [NAD(P)H] activity|0047134||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209121.1;locus_tag=AD853_RS01580;product=protein-disulfide reductase DsbD;protein_id=WP_038823821.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 359750 361897 . - . ID=gene-AD853_RS01585;Name=fdhF;gbkey=Gene;gene=fdhF;gene_biotype=protein_coding;locus_tag=AD853_RS01585;old_locus_tag=ERS008462_00321 NZ_CPUY01000001.1 Protein Homology CDS 359750 361897 . - 0 ID=cds-WP_038823819.1;Parent=gene-AD853_RS01585;Dbxref=GenBank:WP_038823819.1;Name=WP_038823819.1;Ontology_term=GO:0015942,GO:0008863,GO:0009326;gbkey=CDS;gene=fdhF;go_component=formate dehydrogenase complex|0009326||IEA;go_function=formate dehydrogenase (NAD+) activity|0008863||IEA;go_process=formate metabolic process|0015942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011191608.1;locus_tag=AD853_RS01585;product=formate dehydrogenase subunit alpha;protein_id=WP_038823819.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 361920 362477 . - . ID=gene-AD853_RS01590;Name=AD853_RS01590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS01590;old_locus_tag=ERS008462_00322 NZ_CPUY01000001.1 Protein Homology CDS 361920 362477 . - 0 ID=cds-WP_038823818.1;Parent=gene-AD853_RS01590;Dbxref=GenBank:WP_038823818.1;Name=WP_038823818.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209119.1;locus_tag=AD853_RS01590;product=4Fe-4S binding protein;protein_id=WP_038823818.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 362500 364515 . - . ID=gene-AD853_RS01595;Name=aegA;gbkey=Gene;gene=aegA;gene_biotype=protein_coding;locus_tag=AD853_RS01595;old_locus_tag=ERS008462_00323 NZ_CPUY01000001.1 Protein Homology CDS 362500 364515 . - 0 ID=cds-WP_038823817.1;Parent=gene-AD853_RS01595;Dbxref=GenBank:WP_038823817.1;Name=WP_038823817.1;Ontology_term=GO:0016491;gbkey=CDS;gene=aegA;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105760.1;locus_tag=AD853_RS01595;product=formate-dependent uric acid utilization protein AegA;protein_id=WP_038823817.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 364718 364903 . - . ID=gene-AD853_RS21970;Name=AD853_RS21970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS21970 NZ_CPUY01000001.1 Protein Homology CDS 364718 364903 . - 0 ID=cds-WP_002216121.1;Parent=gene-AD853_RS21970;Dbxref=GenBank:WP_002216121.1;Name=WP_002216121.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002216121.1;locus_tag=AD853_RS21970;product=hypothetical protein;protein_id=WP_002216121.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 364935 365510 . + . ID=gene-AD853_RS01600;Name=AD853_RS01600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS01600;old_locus_tag=ERS008462_00324 NZ_CPUY01000001.1 Protein Homology CDS 364935 365510 . + 0 ID=cds-WP_002209117.1;Parent=gene-AD853_RS01600;Dbxref=GenBank:WP_002209117.1;Name=WP_002209117.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005175574.1;locus_tag=AD853_RS01600;product=transcriptional regulator;protein_id=WP_002209117.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 365655 365730 . + . ID=gene-AD853_RS01605;Name=AD853_RS01605;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD853_RS01605;old_locus_tag=ERS008462_00325 NZ_CPUY01000001.1 tRNAscan-SE tRNA 365655 365730 . + . ID=rna-AD853_RS01605;Parent=gene-AD853_RS01605;anticodon=(pos:365688..365690);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD853_RS01605;product=tRNA-Phe NZ_CPUY01000001.1 tRNAscan-SE exon 365655 365730 . + . ID=exon-AD853_RS01605-1;Parent=rna-AD853_RS01605;anticodon=(pos:365688..365690);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD853_RS01605;product=tRNA-Phe NZ_CPUY01000001.1 RefSeq gene 366164 368719 . - . ID=gene-AD853_RS01610;Name=AD853_RS01610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS01610;old_locus_tag=ERS008462_00326 NZ_CPUY01000001.1 Protein Homology CDS 366164 368719 . - 0 ID=cds-WP_038824800.1;Parent=gene-AD853_RS01610;Dbxref=GenBank:WP_038824800.1;Name=WP_038824800.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304680.1;locus_tag=AD853_RS01610;product=putative mucin/carbohydrate-binding domain-containing protein;protein_id=WP_038824800.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 369146 369571 . + . ID=gene-AD853_RS01620;Name=AD853_RS01620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS01620;old_locus_tag=ERS008462_00327 NZ_CPUY01000001.1 Protein Homology CDS 369146 369571 . + 0 ID=cds-WP_002209112.1;Parent=gene-AD853_RS01620;Dbxref=GenBank:WP_002209112.1;Name=WP_002209112.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209112.1;locus_tag=AD853_RS01620;product=subtilase family AB5 toxin binding subunit;protein_id=WP_002209112.1;transl_table=11 NZ_CPUY01000001.1 RefSeq pseudogene 369634 369990 . - . ID=gene-AD853_RS20125;Name=AD853_RS20125;end_range=369990,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD853_RS20125;partial=true;pseudo=true NZ_CPUY01000001.1 Protein Homology CDS 369634 369990 . - 0 ID=cds-AD853_RS20125;Parent=gene-AD853_RS20125;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=369990,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_209027934.1;locus_tag=AD853_RS20125;partial=true;product=IS1 family transposase;pseudo=true;transl_table=11 NZ_CPUY01000001.1 RefSeq pseudogene 370007 370269 . - . ID=gene-AD853_RS22415;Name=AD853_RS22415;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD853_RS22415;pseudo=true NZ_CPUY01000001.1 Protein Homology CDS 370007 370269 . - 0 ID=cds-AD853_RS22415;Parent=gene-AD853_RS22415;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002217947.1;locus_tag=AD853_RS22415;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 370423 371457 . + . ID=gene-AD853_RS01630;Name=rhaT;gbkey=Gene;gene=rhaT;gene_biotype=protein_coding;locus_tag=AD853_RS01630;old_locus_tag=ERS008462_00328 NZ_CPUY01000001.1 Protein Homology CDS 370423 371457 . + 0 ID=cds-WP_038824798.1;Parent=gene-AD853_RS01630;Dbxref=GenBank:WP_038824798.1;Name=WP_038824798.1;gbkey=CDS;gene=rhaT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462931.1;locus_tag=AD853_RS01630;product=L-rhamnose/proton symporter RhaT;protein_id=WP_038824798.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 371606 372478 . - . ID=gene-AD853_RS01635;Name=rhaR;gbkey=Gene;gene=rhaR;gene_biotype=protein_coding;locus_tag=AD853_RS01635;old_locus_tag=ERS008462_00329 NZ_CPUY01000001.1 Protein Homology CDS 371606 372478 . - 0 ID=cds-WP_011191603.1;Parent=gene-AD853_RS01635;Dbxref=GenBank:WP_011191603.1;Name=WP_011191603.1;gbkey=CDS;gene=rhaR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304682.1;locus_tag=AD853_RS01635;product=HTH-type transcriptional activator RhaR;protein_id=WP_011191603.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 372611 373432 . - . ID=gene-AD853_RS01640;Name=rhaS;gbkey=Gene;gene=rhaS;gene_biotype=protein_coding;locus_tag=AD853_RS01640;old_locus_tag=ERS008462_00330 NZ_CPUY01000001.1 Protein Homology CDS 372611 373432 . - 0 ID=cds-WP_038824797.1;Parent=gene-AD853_RS01640;Dbxref=GenBank:WP_038824797.1;Name=WP_038824797.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=rhaS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004706026.1;locus_tag=AD853_RS01640;product=HTH-type transcriptional activator RhaS;protein_id=WP_038824797.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 373654 373830 . - . ID=gene-AD853_RS01650;Name=AD853_RS01650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS01650;old_locus_tag=ERS008462_00332 NZ_CPUY01000001.1 Protein Homology CDS 373654 373830 . - 0 ID=cds-WP_012304683.1;Parent=gene-AD853_RS01650;Dbxref=GenBank:WP_012304683.1;Name=WP_012304683.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209106.1;locus_tag=AD853_RS01650;product=hypothetical protein;protein_id=WP_012304683.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 373829 375286 . + . ID=gene-AD853_RS01655;Name=rhaB;gbkey=Gene;gene=rhaB;gene_biotype=protein_coding;locus_tag=AD853_RS01655;old_locus_tag=ERS008462_00333 NZ_CPUY01000001.1 Protein Homology CDS 373829 375286 . + 0 ID=cds-WP_038824795.1;Parent=gene-AD853_RS01655;Dbxref=GenBank:WP_038824795.1;Name=WP_038824795.1;Ontology_term=GO:0005975,GO:0019301,GO:0008993;gbkey=CDS;gene=rhaB;go_function=rhamnulokinase activity|0008993||IEA;go_process=carbohydrate metabolic process|0005975||IEA,rhamnose catabolic process|0019301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209105.1;locus_tag=AD853_RS01655;product=rhamnulokinase;protein_id=WP_038824795.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 375283 376539 . + . ID=gene-AD853_RS01660;Name=AD853_RS01660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS01660;old_locus_tag=ERS008462_00334 NZ_CPUY01000001.1 Protein Homology CDS 375283 376539 . + 0 ID=cds-WP_038824794.1;Parent=gene-AD853_RS01660;Dbxref=GenBank:WP_038824794.1;Name=WP_038824794.1;Ontology_term=GO:0019318,GO:0008740,GO:0030145;gbkey=CDS;go_function=L-rhamnose isomerase activity|0008740||IEA,manganese ion binding|0030145||IEA;go_process=hexose metabolic process|0019318||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105828.1;locus_tag=AD853_RS01660;product=L-rhamnose isomerase;protein_id=WP_038824794.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 376552 377376 . + . ID=gene-AD853_RS01665;Name=rhaD;gbkey=Gene;gene=rhaD;gene_biotype=protein_coding;locus_tag=AD853_RS01665;old_locus_tag=ERS008462_00335 NZ_CPUY01000001.1 Protein Homology CDS 376552 377376 . + 0 ID=cds-WP_011191600.1;Parent=gene-AD853_RS01665;Dbxref=GenBank:WP_011191600.1;Name=WP_011191600.1;Ontology_term=GO:0019301,GO:0008994;gbkey=CDS;gene=rhaD;go_function=rhamnulose-1-phosphate aldolase activity|0008994||IEA;go_process=rhamnose catabolic process|0019301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016674148.1;locus_tag=AD853_RS01665;product=rhamnulose-1-phosphate aldolase;protein_id=WP_011191600.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 377443 378591 . + . ID=gene-AD853_RS01670;Name=fucO;gbkey=Gene;gene=fucO;gene_biotype=protein_coding;locus_tag=AD853_RS01670;old_locus_tag=ERS008462_00336 NZ_CPUY01000001.1 Protein Homology CDS 377443 378591 . + 0 ID=cds-WP_038824792.1;Parent=gene-AD853_RS01670;Dbxref=GenBank:WP_038824792.1;Name=WP_038824792.1;Ontology_term=GO:0008912;gbkey=CDS;gene=fucO;go_function=lactaldehyde reductase activity|0008912||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224358.1;locus_tag=AD853_RS01670;product=lactaldehyde reductase;protein_id=WP_038824792.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 378605 378919 . + . ID=gene-AD853_RS01675;Name=rhaM;gbkey=Gene;gene=rhaM;gene_biotype=protein_coding;locus_tag=AD853_RS01675;old_locus_tag=ERS008462_00337 NZ_CPUY01000001.1 Protein Homology CDS 378605 378919 . + 0 ID=cds-WP_002209101.1;Parent=gene-AD853_RS01675;Dbxref=GenBank:WP_002209101.1;Name=WP_002209101.1;Ontology_term=GO:0019318,GO:0016857,GO:0062192,GO:0005737;gbkey=CDS;gene=rhaM;go_component=cytoplasm|0005737||IEA;go_function=racemase and epimerase activity%2C acting on carbohydrates and derivatives|0016857||IEA,L-rhamnose mutarotase activity|0062192||IEA;go_process=hexose metabolic process|0019318||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462924.1;locus_tag=AD853_RS01675;product=L-rhamnose mutarotase;protein_id=WP_002209101.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 379130 379678 . - . ID=gene-AD853_RS01680;Name=ssb1;gbkey=Gene;gene=ssb1;gene_biotype=protein_coding;locus_tag=AD853_RS01680;old_locus_tag=ERS008462_00338 NZ_CPUY01000001.1 Protein Homology CDS 379130 379678 . - 0 ID=cds-WP_002209100.1;Parent=gene-AD853_RS01680;Dbxref=GenBank:WP_002209100.1;Name=WP_002209100.1;gbkey=CDS;gene=ssb1;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000168322.1;locus_tag=AD853_RS01680;product=single-stranded DNA-binding protein SSB1;protein_id=WP_002209100.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 380119 382962 . + . ID=gene-AD853_RS01685;Name=uvrA;gbkey=Gene;gene=uvrA;gene_biotype=protein_coding;locus_tag=AD853_RS01685;old_locus_tag=ERS008462_00339 NZ_CPUY01000001.1 Protein Homology CDS 380119 382962 . + 0 ID=cds-WP_011191598.1;Parent=gene-AD853_RS01685;Dbxref=GenBank:WP_011191598.1;Name=WP_011191598.1;Ontology_term=GO:0006289,GO:0003677,GO:0005524,GO:0016887;gbkey=CDS;gene=uvrA;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105829.1;locus_tag=AD853_RS01685;product=excinuclease ABC subunit UvrA;protein_id=WP_011191598.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 383055 383414 . - . ID=gene-AD853_RS01690;Name=AD853_RS01690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS01690;old_locus_tag=ERS008462_00340 NZ_CPUY01000001.1 Protein Homology CDS 383055 383414 . - 0 ID=cds-WP_002209098.1;Parent=gene-AD853_RS01690;Dbxref=GenBank:WP_002209098.1;Name=WP_002209098.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209098.1;locus_tag=AD853_RS01690;product=MmcQ/YjbR family DNA-binding protein;protein_id=WP_002209098.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 383941 385134 . - . ID=gene-AD853_RS01695;Name=AD853_RS01695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS01695;old_locus_tag=ERS008462_00341 NZ_CPUY01000001.1 Protein Homology CDS 383941 385134 . - 0 ID=cds-WP_012105830.1;Parent=gene-AD853_RS01695;Dbxref=GenBank:WP_012105830.1;Name=WP_012105830.1;Ontology_term=GO:0008483,GO:0030170;gbkey=CDS;go_function=transaminase activity|0008483||IEA,pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304686.1;locus_tag=AD853_RS01695;product=amino acid aminotransferase;protein_id=WP_012105830.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 385320 386399 . - . ID=gene-AD853_RS01700;Name=alr;gbkey=Gene;gene=alr;gene_biotype=protein_coding;locus_tag=AD853_RS01700;old_locus_tag=ERS008462_00342 NZ_CPUY01000001.1 Protein Homology CDS 385320 386399 . - 0 ID=cds-WP_038825343.1;Parent=gene-AD853_RS01700;Dbxref=GenBank:WP_038825343.1;Name=WP_038825343.1;Ontology_term=GO:0006522,GO:0009252,GO:0008784;gbkey=CDS;gene=alr;go_function=alanine racemase activity|0008784||IEA;go_process=alanine metabolic process|0006522||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304687.1;locus_tag=AD853_RS01700;product=alanine racemase;protein_id=WP_038825343.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 386496 387902 . - . ID=gene-AD853_RS01705;Name=dnaB;gbkey=Gene;gene=dnaB;gene_biotype=protein_coding;locus_tag=AD853_RS01705;old_locus_tag=ERS008462_00343 NZ_CPUY01000001.1 Protein Homology CDS 386496 387902 . - 0 ID=cds-WP_002209095.1;Parent=gene-AD853_RS01705;Dbxref=GenBank:WP_002209095.1;Name=WP_002209095.1;gbkey=CDS;gene=dnaB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004711204.1;locus_tag=AD853_RS01705;product=replicative DNA helicase;protein_id=WP_002209095.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 388234 389217 . + . ID=gene-AD853_RS01710;Name=AD853_RS01710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS01710;old_locus_tag=ERS008462_00344 NZ_CPUY01000001.1 Protein Homology CDS 388234 389217 . + 0 ID=cds-WP_011191595.1;Parent=gene-AD853_RS01710;Dbxref=GenBank:WP_011191595.1;Name=WP_011191595.1;Ontology_term=GO:0008270,GO:0016491;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019082201.1;locus_tag=AD853_RS01710;product=quinone oxidoreductase;protein_id=WP_011191595.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 389562 389780 . - . ID=gene-AD853_RS01715;Name=pspG;gbkey=Gene;gene=pspG;gene_biotype=protein_coding;locus_tag=AD853_RS01715;old_locus_tag=ERS008462_00345 NZ_CPUY01000001.1 Protein Homology CDS 389562 389780 . - 0 ID=cds-WP_002209093.1;Parent=gene-AD853_RS01715;Dbxref=GenBank:WP_002209093.1;Name=WP_002209093.1;gbkey=CDS;gene=pspG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004719412.1;locus_tag=AD853_RS01715;product=envelope stress response protein PspG;protein_id=WP_002209093.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 390296 391333 . - . ID=gene-AD853_RS01720;Name=dusA;gbkey=Gene;gene=dusA;gene_biotype=protein_coding;locus_tag=AD853_RS01720;old_locus_tag=ERS008462_00346 NZ_CPUY01000001.1 Protein Homology CDS 390296 391333 . - 0 ID=cds-WP_002209092.1;Parent=gene-AD853_RS01720;Dbxref=GenBank:WP_002209092.1;Name=WP_002209092.1;Ontology_term=GO:0002943,GO:0017150,GO:0050660;gbkey=CDS;gene=dusA;go_function=tRNA dihydrouridine synthase activity|0017150||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA dihydrouridine synthesis|0002943||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209092.1;locus_tag=AD853_RS01720;product=tRNA dihydrouridine(20/20a) synthase DusA;protein_id=WP_002209092.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 391588 392097 . + . ID=gene-AD853_RS01725;Name=zur;gbkey=Gene;gene=zur;gene_biotype=protein_coding;locus_tag=AD853_RS01725;old_locus_tag=ERS008462_00347 NZ_CPUY01000001.1 Protein Homology CDS 391588 392097 . + 0 ID=cds-WP_002214647.1;Parent=gene-AD853_RS01725;Dbxref=GenBank:WP_002214647.1;Name=WP_002214647.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=zur;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002214647.1;locus_tag=AD853_RS01725;product=zinc uptake transcriptional repressor Zur;protein_id=WP_002214647.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 392257 392865 . - . ID=gene-AD853_RS01730;Name=lexA;gbkey=Gene;gene=lexA;gene_biotype=protein_coding;locus_tag=AD853_RS01730;old_locus_tag=ERS008462_00348 NZ_CPUY01000001.1 Protein Homology CDS 392257 392865 . - 0 ID=cds-WP_002209090.1;Parent=gene-AD853_RS01730;Dbxref=GenBank:WP_002209090.1;Name=WP_002209090.1;Ontology_term=GO:0009432,GO:0045892,GO:0004252;gbkey=CDS;gene=lexA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=SOS response|0009432||IEA,negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015869689.1;locus_tag=AD853_RS01730;product=transcriptional repressor LexA;protein_id=WP_002209090.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 392990 393361 . - . ID=gene-AD853_RS01735;Name=AD853_RS01735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS01735;old_locus_tag=ERS008462_00349 NZ_CPUY01000001.1 Protein Homology CDS 392990 393361 . - 0 ID=cds-WP_002209089.1;Parent=gene-AD853_RS01735;Dbxref=GenBank:WP_002209089.1;Name=WP_002209089.1;Ontology_term=GO:0006654,GO:0008654,GO:0016310,GO:0004143,GO:0005524,GO:0046872,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP-dependent diacylglycerol kinase activity|0004143||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=phosphatidic acid biosynthetic process|0006654||IEA,phospholipid biosynthetic process|0008654||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209089.1;locus_tag=AD853_RS01735;product=diacylglycerol kinase;protein_id=WP_002209089.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 393489 395975 . + . ID=gene-AD853_RS01740;Name=plsB;gbkey=Gene;gene=plsB;gene_biotype=protein_coding;locus_tag=AD853_RS01740;old_locus_tag=ERS008462_00350 NZ_CPUY01000001.1 Protein Homology CDS 393489 395975 . + 0 ID=cds-WP_012304690.1;Parent=gene-AD853_RS01740;Dbxref=GenBank:WP_012304690.1;Name=WP_012304690.1;Ontology_term=GO:0008654,GO:0004366;gbkey=CDS;gene=plsB;go_function=glycerol-3-phosphate O-acyltransferase activity|0004366||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015683539.1;locus_tag=AD853_RS01740;product=glycerol-3-phosphate 1-O-acyltransferase PlsB;protein_id=WP_012304690.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 396156 397022 . - . ID=gene-AD853_RS01745;Name=ubiA;gbkey=Gene;gene=ubiA;gene_biotype=protein_coding;locus_tag=AD853_RS01745;old_locus_tag=ERS008462_00351 NZ_CPUY01000001.1 Protein Homology CDS 396156 397022 . - 0 ID=cds-WP_002209088.1;Parent=gene-AD853_RS01745;Dbxref=GenBank:WP_002209088.1;Name=WP_002209088.1;Ontology_term=GO:0006744,GO:0008412;gbkey=CDS;gene=ubiA;go_function=4-hydroxybenzoate polyprenyltransferase activity|0008412||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209088.1;locus_tag=AD853_RS01745;product=4-hydroxybenzoate octaprenyltransferase;protein_id=WP_002209088.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 397188 397712 . - . ID=gene-AD853_RS01750;Name=ubiC;gbkey=Gene;gene=ubiC;gene_biotype=protein_coding;locus_tag=AD853_RS01750;old_locus_tag=ERS008462_00352 NZ_CPUY01000001.1 Protein Homology CDS 397188 397712 . - 0 ID=cds-WP_002209087.1;Parent=gene-AD853_RS01750;Dbxref=GenBank:WP_002209087.1;Name=WP_002209087.1;Ontology_term=GO:0008813;gbkey=CDS;gene=ubiC;go_function=chorismate lyase activity|0008813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209087.1;locus_tag=AD853_RS01750;product=chorismate lyase;protein_id=WP_002209087.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 398638 402357 . + . ID=gene-AD853_RS01755;Name=yapK;gbkey=Gene;gene=yapK;gene_biotype=protein_coding;locus_tag=AD853_RS01755;old_locus_tag=ERS008462_00353 NZ_CPUY01000001.1 Protein Homology CDS 398638 402357 . + 0 ID=cds-WP_072080735.1;Parent=gene-AD853_RS01755;Dbxref=GenBank:WP_072080735.1;Name=WP_072080735.1;gbkey=CDS;gene=yapK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_072120866.1;locus_tag=AD853_RS01755;product=autotransporter adhesin YapK;protein_id=WP_072080735.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 402701 404758 . - . ID=gene-AD853_RS01760;Name=AD853_RS01760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS01760;old_locus_tag=ERS008462_00354 NZ_CPUY01000001.1 Protein Homology CDS 402701 404758 . - 0 ID=cds-WP_038830662.1;Parent=gene-AD853_RS01760;Dbxref=GenBank:WP_038830662.1;Name=WP_038830662.1;Ontology_term=GO:0050660;gbkey=CDS;go_function=flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011191591.1;locus_tag=AD853_RS01760;product=FAD-binding protein;protein_id=WP_038830662.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 405760 407079 . - . ID=gene-AD853_RS01770;Name=AD853_RS01770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS01770;old_locus_tag=ERS008462_00355 NZ_CPUY01000001.1 Protein Homology CDS 405760 407079 . - 0 ID=cds-WP_038824436.1;Parent=gene-AD853_RS01770;Dbxref=GenBank:WP_038824436.1;Name=WP_038824436.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002214633.1;locus_tag=AD853_RS01770;product=hypothetical protein;protein_id=WP_038824436.1;transl_table=11 NZ_CPUY01000001.1 RefSeq pseudogene 407278 407378 . - . ID=gene-AD853_RS21250;Name=AD853_RS21250;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD853_RS21250;partial=true;pseudo=true;start_range=.,407278 NZ_CPUY01000001.1 Protein Homology CDS 407278 407378 . - 0 ID=cds-AD853_RS21250;Parent=gene-AD853_RS21250;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002213014.1;locus_tag=AD853_RS21250;partial=true;product=type VI secretion system contractile sheath small subunit;pseudo=true;start_range=.,407278;transl_table=11 NZ_CPUY01000001.1 RefSeq pseudogene 408271 408523 . - . ID=gene-AD853_RS01775;Name=AD853_RS01775;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD853_RS01775;pseudo=true NZ_CPUY01000001.1 Protein Homology CDS 408271 408523 . - 0 ID=cds-AD853_RS01775;Parent=gene-AD853_RS01775;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002214631.1;locus_tag=AD853_RS01775;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 408534 409277 . - . ID=gene-AD853_RS01780;Name=AD853_RS01780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS01780;old_locus_tag=ERS008462_00356 NZ_CPUY01000001.1 Protein Homology CDS 408534 409277 . - 0 ID=cds-WP_002209082.1;Parent=gene-AD853_RS01780;Dbxref=GenBank:WP_002209082.1;Name=WP_002209082.1;Ontology_term=GO:0006457;gbkey=CDS;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209082.1;locus_tag=AD853_RS01780;product=fimbria/pilus chaperone family protein;protein_id=WP_002209082.1;transl_table=11 NZ_CPUY01000001.1 RefSeq pseudogene 409349 411727 . - . ID=gene-AD853_RS01785;Name=AD853_RS01785;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD853_RS01785;old_locus_tag=ERS008462_00358;pseudo=true NZ_CPUY01000001.1 Protein Homology CDS 409349 411727 . - 0 ID=cds-AD853_RS01785;Parent=gene-AD853_RS01785;Note=internal stop;Ontology_term=GO:0009297,GO:0015473,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=fimbrial usher porin activity|0015473||IEA;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304694.1;locus_tag=AD853_RS01785;product=fimbria/pilus outer membrane usher protein;pseudo=true;transl_table=11 NZ_CPUY01000001.1 RefSeq pseudogene 411978 412542 . - . ID=gene-AD853_RS01790;Name=AD853_RS01790;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD853_RS01790;pseudo=true NZ_CPUY01000001.1 Protein Homology CDS 411978 412542 . - 0 ID=cds-AD853_RS01790;Parent=gene-AD853_RS01790;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209080.1;locus_tag=AD853_RS01790;product=DUF1120 domain-containing protein;pseudo=true;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 413181 413756 . - . ID=gene-AD853_RS01795;Name=AD853_RS01795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS01795;old_locus_tag=ERS008462_00360 NZ_CPUY01000001.1 Protein Homology CDS 413181 413756 . - 0 ID=cds-WP_002209079.1;Parent=gene-AD853_RS01795;Dbxref=GenBank:WP_002209079.1;Name=WP_002209079.1;Ontology_term=GO:0006950;gbkey=CDS;go_process=response to stress|0006950||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309383.1;locus_tag=AD853_RS01795;product=TerD family protein;protein_id=WP_002209079.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 413940 414518 . - . ID=gene-AD853_RS01800;Name=AD853_RS01800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS01800;old_locus_tag=ERS008462_00361 NZ_CPUY01000001.1 Protein Homology CDS 413940 414518 . - 0 ID=cds-WP_002209078.1;Parent=gene-AD853_RS01800;Dbxref=GenBank:WP_002209078.1;Name=WP_002209078.1;Ontology_term=GO:0006950;gbkey=CDS;go_process=response to stress|0006950||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309382.1;locus_tag=AD853_RS01800;product=TerD family protein;protein_id=WP_002209078.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 414582 415619 . - . ID=gene-AD853_RS01805;Name=AD853_RS01805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS01805;old_locus_tag=ERS008462_00362 NZ_CPUY01000001.1 Protein Homology CDS 414582 415619 . - 0 ID=cds-WP_012304695.1;Parent=gene-AD853_RS01805;Dbxref=GenBank:WP_012304695.1;Name=WP_012304695.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304695.1;locus_tag=AD853_RS01805;product=TerC/Alx family metal homeostasis membrane protein;protein_id=WP_012304695.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 415641 416096 . - . ID=gene-AD853_RS01810;Name=AD853_RS01810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS01810;old_locus_tag=ERS008462_00363 NZ_CPUY01000001.1 Protein Homology CDS 415641 416096 . - 0 ID=cds-WP_002209076.1;Parent=gene-AD853_RS01810;Dbxref=GenBank:WP_002209076.1;Name=WP_002209076.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209076.1;locus_tag=AD853_RS01810;product=tellurite resistance TerB family protein;protein_id=WP_002209076.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 416129 417313 . - . ID=gene-AD853_RS01815;Name=AD853_RS01815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS01815;old_locus_tag=ERS008462_00364 NZ_CPUY01000001.1 Protein Homology CDS 416129 417313 . - 0 ID=cds-WP_002209075.1;Parent=gene-AD853_RS01815;Dbxref=GenBank:WP_002209075.1;Name=WP_002209075.1;Ontology_term=GO:0046690;gbkey=CDS;go_process=response to tellurium ion|0046690||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209075.1;locus_tag=AD853_RS01815;product=TerD family protein;protein_id=WP_002209075.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 417313 417906 . - . ID=gene-AD853_RS01820;Name=AD853_RS01820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS01820;old_locus_tag=ERS008462_00365 NZ_CPUY01000001.1 Protein Homology CDS 417313 417906 . - 0 ID=cds-WP_011191586.1;Parent=gene-AD853_RS01820;Dbxref=GenBank:WP_011191586.1;Name=WP_011191586.1;Ontology_term=GO:0050896;gbkey=CDS;go_process=response to stimulus|0050896||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309378.1;locus_tag=AD853_RS01820;product=TerD family protein;protein_id=WP_011191586.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 418182 419243 . + . ID=gene-AD853_RS01825;Name=AD853_RS01825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS01825;old_locus_tag=ERS008462_00366 NZ_CPUY01000001.1 Protein Homology CDS 418182 419243 . + 0 ID=cds-WP_038826695.1;Parent=gene-AD853_RS01825;Dbxref=GenBank:WP_038826695.1;Name=WP_038826695.1;Ontology_term=GO:0005524,GO:0016874;gbkey=CDS;go_function=ATP binding|0005524||IEA,ligase activity|0016874||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105843.1;locus_tag=AD853_RS01825;product=ATP-grasp domain-containing protein;protein_id=WP_038826695.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 419255 420391 . + . ID=gene-AD853_RS01830;Name=AD853_RS01830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS01830;old_locus_tag=ERS008462_00367 NZ_CPUY01000001.1 Protein Homology CDS 419255 420391 . + 0 ID=cds-WP_038824215.1;Parent=gene-AD853_RS01830;Dbxref=GenBank:WP_038824215.1;Name=WP_038824215.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209072.1;locus_tag=AD853_RS01830;product=phosphoribosyltransferase domain-containing protein;protein_id=WP_038824215.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 420384 421196 . + . ID=gene-AD853_RS01835;Name=AD853_RS01835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS01835;old_locus_tag=ERS008462_00368 NZ_CPUY01000001.1 Protein Homology CDS 420384 421196 . + 0 ID=cds-WP_038824214.1;Parent=gene-AD853_RS01835;Dbxref=GenBank:WP_038824214.1;Name=WP_038824214.1;Ontology_term=GO:0005215,GO:0005524,GO:0016887;gbkey=CDS;go_function=transporter activity|0005215||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209071.1;locus_tag=AD853_RS01835;product=HAD family hydrolase;protein_id=WP_038824214.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 421189 422268 . + . ID=gene-AD853_RS01840;Name=AD853_RS01840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS01840;old_locus_tag=ERS008462_00369 NZ_CPUY01000001.1 Protein Homology CDS 421189 422268 . + 0 ID=cds-WP_002209070.1;Parent=gene-AD853_RS01840;Dbxref=GenBank:WP_002209070.1;Name=WP_002209070.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209070.1;locus_tag=AD853_RS01840;product=cysteine protease StiP family protein;protein_id=WP_002209070.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 422268 423227 . + . ID=gene-AD853_RS01845;Name=AD853_RS01845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS01845;old_locus_tag=ERS008462_00370 NZ_CPUY01000001.1 Protein Homology CDS 422268 423227 . + 0 ID=cds-WP_002209069.1;Parent=gene-AD853_RS01845;Dbxref=GenBank:WP_002209069.1;Name=WP_002209069.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304696.1;locus_tag=AD853_RS01845;product=citrate lyase subunit beta;protein_id=WP_002209069.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 423624 424112 . + . ID=gene-AD853_RS01850;Name=AD853_RS01850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS01850;old_locus_tag=ERS008462_00371 NZ_CPUY01000001.1 Protein Homology CDS 423624 424112 . + 0 ID=cds-WP_002209068.1;Parent=gene-AD853_RS01850;Dbxref=GenBank:WP_002209068.1;Name=WP_002209068.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209068.1;locus_tag=AD853_RS01850;product=tellurium resistance protein TerW;protein_id=WP_002209068.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 424427 425227 . + . ID=gene-AD853_RS01855;Name=AD853_RS01855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS01855;old_locus_tag=ERS008462_00372 NZ_CPUY01000001.1 Protein Homology CDS 424427 425227 . + 0 ID=cds-WP_002209067.1;Parent=gene-AD853_RS01855;Dbxref=GenBank:WP_002209067.1;Name=WP_002209067.1;Ontology_term=GO:0006555,GO:0004489,GO:0050660;gbkey=CDS;go_function=methylenetetrahydrofolate reductase [NAD(P)H] activity|0004489||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=methionine metabolic process|0006555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209067.1;locus_tag=AD853_RS01855;product=methylenetetrahydrofolate reductase;protein_id=WP_002209067.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 425568 426881 . + . ID=gene-AD853_RS01860;Name=hutW;gbkey=Gene;gene=hutW;gene_biotype=protein_coding;locus_tag=AD853_RS01860;old_locus_tag=ERS008462_00373 NZ_CPUY01000001.1 Protein Homology CDS 425568 426881 . + 0 ID=cds-WP_038824213.1;Parent=gene-AD853_RS01860;Dbxref=GenBank:WP_038824213.1;Name=WP_038824213.1;Ontology_term=GO:0003824,GO:0051536;gbkey=CDS;gene=hutW;go_function=catalytic activity|0003824||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019084272.1;locus_tag=AD853_RS01860;product=heme anaerobic degradation radical SAM methyltransferase ChuW/HutW;protein_id=WP_038824213.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 426914 427423 . + . ID=gene-AD853_RS01865;Name=hutX;gbkey=Gene;gene=hutX;gene_biotype=protein_coding;locus_tag=AD853_RS01865;old_locus_tag=ERS008462_00374 NZ_CPUY01000001.1 Protein Homology CDS 426914 427423 . + 0 ID=cds-WP_002209065.1;Parent=gene-AD853_RS01865;Dbxref=GenBank:WP_002209065.1;Name=WP_002209065.1;gbkey=CDS;gene=hutX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209065.1;locus_tag=AD853_RS01865;product=heme utilization cystosolic carrier protein HutX;protein_id=WP_002209065.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 427457 428107 . + . ID=gene-AD853_RS01870;Name=AD853_RS01870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS01870;old_locus_tag=ERS008462_00375 NZ_CPUY01000001.1 Protein Homology CDS 427457 428107 . + 0 ID=cds-WP_002209064.1;Parent=gene-AD853_RS01870;Dbxref=GenBank:WP_002209064.1;Name=WP_002209064.1;Ontology_term=GO:0016491,GO:0070403;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209064.1;locus_tag=AD853_RS01870;product=NAD(P)-binding oxidoreductase;protein_id=WP_002209064.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 428193 428384 . + . ID=gene-AD853_RS21440;Name=hemP;gbkey=Gene;gene=hemP;gene_biotype=protein_coding;locus_tag=AD853_RS21440;old_locus_tag=ERS008462_00376 NZ_CPUY01000001.1 Protein Homology CDS 428193 428384 . + 0 ID=cds-WP_011191581.1;Parent=gene-AD853_RS21440;Dbxref=GenBank:WP_011191581.1;Name=WP_011191581.1;gbkey=CDS;gene=hemP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011191581.1;locus_tag=AD853_RS21440;product=hemin uptake protein HemP;protein_id=WP_011191581.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 428515 430545 . + . ID=gene-AD853_RS01880;Name=AD853_RS01880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS01880;old_locus_tag=ERS008462_00377 NZ_CPUY01000001.1 Protein Homology CDS 428515 430545 . + 0 ID=cds-WP_011191580.1;Parent=gene-AD853_RS01880;Dbxref=GenBank:WP_011191580.1;Name=WP_011191580.1;Ontology_term=GO:0055085,GO:0022857,GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209062.1;locus_tag=AD853_RS01880;product=TonB-dependent hemoglobin/transferrin/lactoferrin family receptor;protein_id=WP_011191580.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 430664 431701 . + . ID=gene-AD853_RS01885;Name=AD853_RS01885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS01885;old_locus_tag=ERS008462_00378 NZ_CPUY01000001.1 Protein Homology CDS 430664 431701 . + 0 ID=cds-WP_038824211.1;Parent=gene-AD853_RS01885;Dbxref=GenBank:WP_038824211.1;Name=WP_038824211.1;Ontology_term=GO:0006826;gbkey=CDS;go_process=iron ion transport|0006826||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209061.1;locus_tag=AD853_RS01885;product=hemin-degrading factor;protein_id=WP_038824211.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 431698 432537 . + . ID=gene-AD853_RS01890;Name=AD853_RS01890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS01890;old_locus_tag=ERS008462_00379 NZ_CPUY01000001.1 Protein Homology CDS 431698 432537 . + 0 ID=cds-WP_012413435.1;Parent=gene-AD853_RS01890;Dbxref=GenBank:WP_012413435.1;Name=WP_012413435.1;Ontology_term=GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012413435.1;locus_tag=AD853_RS01890;product=heme/hemin ABC transporter substrate-binding protein;protein_id=WP_012413435.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 432534 433538 . + . ID=gene-AD853_RS01895;Name=AD853_RS01895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS01895;old_locus_tag=ERS008462_00380 NZ_CPUY01000001.1 Protein Homology CDS 432534 433538 . + 0 ID=cds-WP_038824210.1;Parent=gene-AD853_RS01895;Dbxref=GenBank:WP_038824210.1;Name=WP_038824210.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209059.1;locus_tag=AD853_RS01895;product=FecCD family ABC transporter permease;protein_id=WP_038824210.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 433531 434331 . + . ID=gene-AD853_RS01900;Name=AD853_RS01900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS01900;old_locus_tag=ERS008462_00381 NZ_CPUY01000001.1 Protein Homology CDS 433531 434331 . + 0 ID=cds-WP_002209058.1;Parent=gene-AD853_RS01900;Dbxref=GenBank:WP_002209058.1;Name=WP_002209058.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209058.1;locus_tag=AD853_RS01900;product=heme ABC transporter ATP-binding protein;protein_id=WP_002209058.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 434472 435653 . - . ID=gene-AD853_RS01905;Name=metC;gbkey=Gene;gene=metC;gene_biotype=protein_coding;locus_tag=AD853_RS01905;old_locus_tag=ERS008462_00382 NZ_CPUY01000001.1 Protein Homology CDS 434472 435653 . - 0 ID=cds-WP_038824207.1;Parent=gene-AD853_RS01905;Dbxref=GenBank:WP_038824207.1;Name=WP_038824207.1;Ontology_term=GO:0009086,GO:0047804;gbkey=CDS;gene=metC;go_function=cysteine-S-conjugate beta-lyase activity|0047804||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304697.1;locus_tag=AD853_RS01905;product=cystathionine beta-lyase;protein_id=WP_038824207.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 435699 436985 . - . ID=gene-AD853_RS01910;Name=AD853_RS01910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS01910;old_locus_tag=ERS008462_00383 NZ_CPUY01000001.1 Protein Homology CDS 435699 436985 . - 0 ID=cds-WP_002209057.1;Parent=gene-AD853_RS01910;Dbxref=GenBank:WP_002209057.1;Name=WP_002209057.1;Ontology_term=GO:0003333,GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transmembrane transport|0003333||IEA,amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016261769.1;locus_tag=AD853_RS01910;product=amino acid permease;protein_id=WP_002209057.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 437155 438138 . + . ID=gene-AD853_RS01915;Name=AD853_RS01915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS01915;old_locus_tag=ERS008462_00384 NZ_CPUY01000001.1 Protein Homology CDS 437155 438138 . + 0 ID=cds-WP_038824206.1;Parent=gene-AD853_RS01915;Dbxref=GenBank:WP_038824206.1;Name=WP_038824206.1;Ontology_term=GO:0006355,GO:0001216,GO:0032993;gbkey=CDS;go_component=protein-DNA complex|0032993||IEA;go_function=DNA-binding transcription activator activity|0001216||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016584811.1;locus_tag=AD853_RS01915;product=LysR family transcriptional regulator;protein_id=WP_038824206.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 438216 438485 . - . ID=gene-AD853_RS01920;Name=yedF;gbkey=Gene;gene=yedF;gene_biotype=protein_coding;locus_tag=AD853_RS01920;old_locus_tag=ERS008462_00385 NZ_CPUY01000001.1 Protein Homology CDS 438216 438485 . - 0 ID=cds-WP_002209055.1;Parent=gene-AD853_RS01920;Dbxref=GenBank:WP_002209055.1;Name=WP_002209055.1;gbkey=CDS;gene=yedF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011191578.1;locus_tag=AD853_RS01920;product=sulfurtransferase-like selenium metabolism protein YedF;protein_id=WP_002209055.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 438482 439696 . - . ID=gene-AD853_RS01925;Name=yedE;gbkey=Gene;gene=yedE;gene_biotype=protein_coding;locus_tag=AD853_RS01925;old_locus_tag=ERS008462_00386 NZ_CPUY01000001.1 Protein Homology CDS 438482 439696 . - 0 ID=cds-WP_002209054.1;Parent=gene-AD853_RS01925;Dbxref=GenBank:WP_002209054.1;Name=WP_002209054.1;gbkey=CDS;gene=yedE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105847.1;locus_tag=AD853_RS01925;product=selenium metabolism membrane protein YedE/FdhT;protein_id=WP_002209054.1;transl_table=11 NZ_CPUY01000001.1 RefSeq pseudogene 439789 439860 . - . ID=gene-AD853_RS21975;Name=AD853_RS21975;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD853_RS21975;partial=true;pseudo=true;start_range=.,439789 NZ_CPUY01000001.1 Protein Homology CDS 439789 439860 . - 0 ID=cds-AD853_RS21975;Parent=gene-AD853_RS21975;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002224869.1;locus_tag=AD853_RS21975;partial=true;product=gluconate 5-dehydrogenase;pseudo=true;start_range=.,439789;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 440079 441146 . - . ID=gene-AD853_RS01930;Name=AD853_RS01930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS01930;old_locus_tag=ERS008462_00387 NZ_CPUY01000001.1 Protein Homology CDS 440079 441146 . - 0 ID=cds-WP_038824201.1;Parent=gene-AD853_RS01930;Dbxref=GenBank:WP_038824201.1;Name=WP_038824201.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209053.1;locus_tag=AD853_RS01930;product=EscU/YscU/HrcU family type III secretion system export apparatus switch protein;protein_id=WP_038824201.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 441136 441930 . - . ID=gene-AD853_RS01935;Name=sctT;gbkey=Gene;gene=sctT;gene_biotype=protein_coding;locus_tag=AD853_RS01935;old_locus_tag=ERS008462_00388 NZ_CPUY01000001.1 Protein Homology CDS 441136 441930 . - 0 ID=cds-WP_002209052.1;Parent=gene-AD853_RS01935;Dbxref=GenBank:WP_002209052.1;Name=WP_002209052.1;Ontology_term=GO:0030254,GO:0016020;gbkey=CDS;gene=sctT;go_component=membrane|0016020||IEA;go_process=protein secretion by the type III secretion system|0030254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209052.1;locus_tag=AD853_RS01935;product=type III secretion system export apparatus subunit SctT;protein_id=WP_002209052.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 441932 442225 . - . ID=gene-AD853_RS01940;Name=AD853_RS01940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS01940;old_locus_tag=ERS008462_00389 NZ_CPUY01000001.1 Protein Homology CDS 441932 442225 . - 0 ID=cds-WP_002209051.1;Parent=gene-AD853_RS01940;Dbxref=GenBank:WP_002209051.1;Name=WP_002209051.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209051.1;locus_tag=AD853_RS01940;product=EscS/YscS/HrcS family type III secretion system export apparatus protein;protein_id=WP_002209051.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 442222 442872 . - . ID=gene-AD853_RS01945;Name=sctR;gbkey=Gene;gene=sctR;gene_biotype=protein_coding;locus_tag=AD853_RS01945;old_locus_tag=ERS008462_00390 NZ_CPUY01000001.1 Protein Homology CDS 442222 442872 . - 0 ID=cds-WP_002221023.1;Parent=gene-AD853_RS01945;Dbxref=GenBank:WP_002221023.1;Name=WP_002221023.1;Ontology_term=GO:0030254,GO:0016020,GO:0030257;gbkey=CDS;gene=sctR;go_component=membrane|0016020||IEA,type III protein secretion system complex|0030257||IEA;go_process=protein secretion by the type III secretion system|0030254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002221023.1;locus_tag=AD853_RS01945;product=type III secretion system export apparatus subunit SctR;protein_id=WP_002221023.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 442999 443961 . - . ID=gene-AD853_RS01950;Name=AD853_RS01950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS01950;old_locus_tag=ERS008462_00391 NZ_CPUY01000001.1 Protein Homology CDS 442999 443961 . - 0 ID=cds-WP_038824199.1;Parent=gene-AD853_RS01950;Dbxref=GenBank:WP_038824199.1;Name=WP_038824199.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209049.1;locus_tag=AD853_RS01950;product=YscQ/HrcQ family type III secretion apparatus protein;protein_id=WP_038824199.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 443939 444337 . - . ID=gene-AD853_RS01955;Name=AD853_RS01955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS01955;old_locus_tag=ERS008462_00392 NZ_CPUY01000001.1 Protein Homology CDS 443939 444337 . - 0 ID=cds-WP_002218091.1;Parent=gene-AD853_RS01955;Dbxref=GenBank:WP_002218091.1;Name=WP_002218091.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002218091.1;locus_tag=AD853_RS01955;product=hypothetical protein;protein_id=WP_002218091.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 444318 444719 . - . ID=gene-AD853_RS01960;Name=AD853_RS01960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS01960;old_locus_tag=ERS008462_00393 NZ_CPUY01000001.1 Protein Homology CDS 444318 444719 . - 0 ID=cds-WP_024063523.1;Parent=gene-AD853_RS01960;Dbxref=GenBank:WP_024063523.1;Name=WP_024063523.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304701.1;locus_tag=AD853_RS01960;product=hypothetical protein;protein_id=WP_024063523.1;transl_table=11 NZ_CPUY01000001.1 RefSeq pseudogene 444716 446053 . - . ID=gene-AD853_RS01965;Name=AD853_RS01965;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD853_RS01965;pseudo=true NZ_CPUY01000001.1 Protein Homology CDS 444716 446053 . - 0 ID=cds-AD853_RS01965;Parent=gene-AD853_RS01965;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209046.1;locus_tag=AD853_RS01965;product=EscN/YscN/HrcN family type III secretion system ATPase;pseudo=true;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 446040 448088 . - . ID=gene-AD853_RS01970;Name=AD853_RS01970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS01970;old_locus_tag=ERS008462_00396 NZ_CPUY01000001.1 Protein Homology CDS 446040 448088 . - 0 ID=cds-WP_012105852.1;Parent=gene-AD853_RS01970;Dbxref=GenBank:WP_012105852.1;Name=WP_012105852.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105852.1;locus_tag=AD853_RS01970;product=EscV/YscV/HrcV family type III secretion system export apparatus protein;protein_id=WP_012105852.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 448081 448692 . - . ID=gene-AD853_RS01975;Name=sctL;gbkey=Gene;gene=sctL;gene_biotype=protein_coding;locus_tag=AD853_RS01975;old_locus_tag=ERS008462_00397 NZ_CPUY01000001.1 Protein Homology CDS 448081 448692 . - 0 ID=cds-WP_050124553.1;Parent=gene-AD853_RS01975;Dbxref=GenBank:WP_050124553.1;Name=WP_050124553.1;Ontology_term=GO:0030254,GO:0030257;gbkey=CDS;gene=sctL;go_component=type III protein secretion system complex|0030257||IEA;go_process=protein secretion by the type III secretion system|0030254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105853.1;locus_tag=AD853_RS01975;product=type III secretion system stator protein SctL;protein_id=WP_050124553.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 448689 449282 . - . ID=gene-AD853_RS01980;Name=AD853_RS01980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS01980;old_locus_tag=ERS008462_00398 NZ_CPUY01000001.1 Protein Homology CDS 448689 449282 . - 0 ID=cds-WP_012413430.1;Parent=gene-AD853_RS01980;Dbxref=GenBank:WP_012413430.1;Name=WP_012413430.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012413430.1;locus_tag=AD853_RS01980;product=type III secretion system domain-containing protein;protein_id=WP_012413430.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 449457 450188 . - . ID=gene-AD853_RS01985;Name=ssaJ;gbkey=Gene;gene=ssaJ;gene_biotype=protein_coding;locus_tag=AD853_RS01985;old_locus_tag=ERS008462_00399 NZ_CPUY01000001.1 Protein Homology CDS 449457 450188 . - 0 ID=cds-WP_011191572.1;Parent=gene-AD853_RS01985;Dbxref=GenBank:WP_011191572.1;Name=WP_011191572.1;gbkey=CDS;gene=ssaJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209042.1;locus_tag=AD853_RS01985;product=EscJ/YscJ/HrcJ family type III secretion inner membrane ring protein SsaJ;protein_id=WP_011191572.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 450185 450436 . - . ID=gene-AD853_RS01990;Name=sctI;gbkey=Gene;gene=sctI;gene_biotype=protein_coding;locus_tag=AD853_RS01990;old_locus_tag=ERS008462_00400 NZ_CPUY01000001.1 Protein Homology CDS 450185 450436 . - 0 ID=cds-WP_002209041.1;Parent=gene-AD853_RS01990;Dbxref=GenBank:WP_002209041.1;Name=WP_002209041.1;Ontology_term=GO:0030254,GO:0030257;gbkey=CDS;gene=sctI;go_component=type III protein secretion system complex|0030257||IEA;go_process=protein secretion by the type III secretion system|0030254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209041.1;locus_tag=AD853_RS01990;product=type III secretion system inner rod subunit SctI;protein_id=WP_002209041.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 450534 450782 . - . ID=gene-AD853_RS01995;Name=AD853_RS01995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS01995;old_locus_tag=ERS008462_00401 NZ_CPUY01000001.1 Protein Homology CDS 450534 450782 . - 0 ID=cds-WP_002209040.1;Parent=gene-AD853_RS01995;Dbxref=GenBank:WP_002209040.1;Name=WP_002209040.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209040.1;locus_tag=AD853_RS01995;product=EscG/YscG/SsaH family type III secretion system needle protein co-chaperone;protein_id=WP_002209040.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 450779 450994 . - . ID=gene-AD853_RS02000;Name=sctF;gbkey=Gene;gene=sctF;gene_biotype=protein_coding;locus_tag=AD853_RS02000;old_locus_tag=ERS008462_00402 NZ_CPUY01000001.1 Protein Homology CDS 450779 450994 . - 0 ID=cds-WP_002216328.1;Parent=gene-AD853_RS02000;Dbxref=GenBank:WP_002216328.1;Name=WP_002216328.1;Ontology_term=GO:0030254,GO:0030257;gbkey=CDS;gene=sctF;go_component=type III protein secretion system complex|0030257||IEA;go_process=protein secretion by the type III secretion system|0030254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002216328.1;locus_tag=AD853_RS02000;product=type III secretion system needle filament subunit SctF;protein_id=WP_002216328.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 451004 451711 . - . ID=gene-AD853_RS02005;Name=AD853_RS02005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS02005;old_locus_tag=ERS008462_00403 NZ_CPUY01000001.1 Protein Homology CDS 451004 451711 . - 0 ID=cds-WP_011171760.1;Parent=gene-AD853_RS02005;Dbxref=GenBank:WP_011171760.1;Name=WP_011171760.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004391768.1;locus_tag=AD853_RS02005;product=helix-turn-helix domain-containing protein;protein_id=WP_011171760.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 451818 452039 . - . ID=gene-AD853_RS02010;Name=AD853_RS02010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS02010;old_locus_tag=ERS008462_00404 NZ_CPUY01000001.1 Protein Homology CDS 451818 452039 . - 0 ID=cds-WP_011191569.1;Parent=gene-AD853_RS02010;Dbxref=GenBank:WP_011191569.1;Name=WP_011191569.1;Ontology_term=GO:0030254;gbkey=CDS;go_process=protein secretion by the type III secretion system|0030254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209038.1;locus_tag=AD853_RS02010;product=EscE/YscE/SsaE family type III secretion system needle protein co-chaperone;protein_id=WP_011191569.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 452058 453269 . - . ID=gene-AD853_RS02015;Name=sctD;gbkey=Gene;gene=sctD;gene_biotype=protein_coding;locus_tag=AD853_RS02015;old_locus_tag=ERS008462_00405 NZ_CPUY01000001.1 Protein Homology CDS 452058 453269 . - 0 ID=cds-WP_038824198.1;Parent=gene-AD853_RS02015;Dbxref=GenBank:WP_038824198.1;Name=WP_038824198.1;Ontology_term=GO:0030254;gbkey=CDS;gene=sctD;go_process=protein secretion by the type III secretion system|0030254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209037.1;locus_tag=AD853_RS02015;product=type III secretion system inner membrane ring subunit SctD;protein_id=WP_038824198.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 453271 454770 . - . ID=gene-AD853_RS02020;Name=AD853_RS02020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS02020;old_locus_tag=ERS008462_00406 NZ_CPUY01000001.1 Protein Homology CDS 453271 454770 . - 0 ID=cds-WP_038824204.1;Parent=gene-AD853_RS02020;Dbxref=GenBank:WP_038824204.1;Name=WP_038824204.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002425231.1;locus_tag=AD853_RS02020;product=EscC/YscC/HrcC family type III secretion system outer membrane ring protein;protein_id=WP_038824204.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 455015 457834 . + . ID=gene-AD853_RS02025;Name=AD853_RS02025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS02025;old_locus_tag=ERS008462_00407 NZ_CPUY01000001.1 Protein Homology CDS 455015 457834 . + 0 ID=cds-WP_038824197.1;Parent=gene-AD853_RS02025;Dbxref=GenBank:WP_038824197.1;Name=WP_038824197.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209035.1;locus_tag=AD853_RS02025;product=two component system sensor kinase;protein_id=WP_038824197.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 457848 458480 . + . ID=gene-AD853_RS02030;Name=AD853_RS02030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS02030;old_locus_tag=ERS008462_00408 NZ_CPUY01000001.1 Protein Homology CDS 457848 458480 . + 0 ID=cds-WP_012105859.1;Parent=gene-AD853_RS02030;Dbxref=GenBank:WP_012105859.1;Name=WP_012105859.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209034.1;locus_tag=AD853_RS02030;product=two component system response regulator;protein_id=WP_012105859.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 458658 459974 . - . ID=gene-AD853_RS02035;Name=gltP;gbkey=Gene;gene=gltP;gene_biotype=protein_coding;locus_tag=AD853_RS02035;old_locus_tag=ERS008462_00409 NZ_CPUY01000001.1 Protein Homology CDS 458658 459974 . - 0 ID=cds-WP_011191564.1;Parent=gene-AD853_RS02035;Dbxref=GenBank:WP_011191564.1;Name=WP_011191564.1;Ontology_term=GO:0006835,GO:0015293,GO:0016020;gbkey=CDS;gene=gltP;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA;go_process=dicarboxylic acid transport|0006835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209033.1;locus_tag=AD853_RS02035;product=glutamate/aspartate:proton symporter GltP;protein_id=WP_011191564.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 460829 462787 . + . ID=gene-AD853_RS02040;Name=acs;gbkey=Gene;gene=acs;gene_biotype=protein_coding;locus_tag=AD853_RS02040;old_locus_tag=ERS008462_00410 NZ_CPUY01000001.1 Protein Homology CDS 460829 462787 . + 0 ID=cds-WP_038824196.1;Parent=gene-AD853_RS02040;Dbxref=GenBank:WP_038824196.1;Name=WP_038824196.1;Ontology_term=GO:0019427,GO:0003987,GO:0016208;gbkey=CDS;gene=acs;go_function=acetate-CoA ligase activity|0003987||IEA,AMP binding|0016208||IEA;go_process=acetyl-CoA biosynthetic process from acetate|0019427||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012004764.1;locus_tag=AD853_RS02040;product=acetate--CoA ligase;protein_id=WP_038824196.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 462844 463155 . + . ID=gene-AD853_RS02045;Name=AD853_RS02045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS02045;old_locus_tag=ERS008462_00411 NZ_CPUY01000001.1 Protein Homology CDS 462844 463155 . + 0 ID=cds-WP_002209030.1;Parent=gene-AD853_RS02045;Dbxref=GenBank:WP_002209030.1;Name=WP_002209030.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209030.1;locus_tag=AD853_RS02045;product=DUF485 domain-containing protein;protein_id=WP_002209030.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 463152 464807 . + . ID=gene-AD853_RS02050;Name=actP;gbkey=Gene;gene=actP;gene_biotype=protein_coding;locus_tag=AD853_RS02050;old_locus_tag=ERS008462_00412 NZ_CPUY01000001.1 Protein Homology CDS 463152 464807 . + 0 ID=cds-WP_011191562.1;Parent=gene-AD853_RS02050;Dbxref=GenBank:WP_011191562.1;Name=WP_011191562.1;Ontology_term=GO:0006814,GO:0015123,GO:0015370,GO:0031402,GO:0005886;gbkey=CDS;gene=actP;go_component=plasma membrane|0005886||IEA;go_function=acetate transmembrane transporter activity|0015123||IEA,solute:sodium symporter activity|0015370||IEA,sodium ion binding|0031402||IEA;go_process=sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209029.1;locus_tag=AD853_RS02050;product=cation/acetate symporter ActP;protein_id=WP_011191562.1;transl_table=11 NZ_CPUY01000001.1 RefSeq gene 464881 466038 . - . ID=gene-AD853_RS02055;Name=AD853_RS02055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS02055;old_locus_tag=ERS008462_00413 NZ_CPUY01000001.1 Protein Homology CDS 464881 466038 . - 0 ID=cds-WP_011191561.1;Parent=gene-AD853_RS02055;Dbxref=GenBank:WP_011191561.1;Name=WP_011191561.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011191561.1;locus_tag=AD853_RS02055;product=dienelactone hydrolase family protein;protein_id=WP_011191561.1;transl_table=11 ##sequence-region NZ_CPUY01000002.1 1 310837 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=633 NZ_CPUY01000002.1 RefSeq region 1 310837 . + . ID=NZ_CPUY01000002.1:1..310837;Dbxref=taxon:633;collection-date=1900/2008;country=South Africa;gbkey=Src;genome=genomic;isolation-source=not known;mol_type=genomic DNA;nat-host=pig;serovar=O:3;strain=IP32544 NZ_CPUY01000002.1 RefSeq pseudogene 68 240 . - . ID=gene-AD853_RS21445;Name=AD853_RS21445;end_range=240,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD853_RS21445;partial=true;pseudo=true;start_range=.,68 NZ_CPUY01000002.1 Protein Homology CDS 68 240 . - 0 ID=cds-AD853_RS21445;Parent=gene-AD853_RS21445;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=240,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016160242.1;locus_tag=AD853_RS21445;partial=true;product=aspartate:proton symporter;pseudo=true;start_range=.,68;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 614 2044 . - . ID=gene-AD853_RS02060;Name=sbcB;gbkey=Gene;gene=sbcB;gene_biotype=protein_coding;locus_tag=AD853_RS02060;old_locus_tag=ERS008462_00415 NZ_CPUY01000002.1 Protein Homology CDS 614 2044 . - 0 ID=cds-WP_038399971.1;Parent=gene-AD853_RS02060;Dbxref=GenBank:WP_038399971.1;Name=WP_038399971.1;Ontology_term=GO:0006281,GO:0000175,GO:0003676,GO:0008310;gbkey=CDS;gene=sbcB;go_function=3'-5'-RNA exonuclease activity|0000175||IEA,nucleic acid binding|0003676||IEA,single-stranded DNA 3'-5' DNA exonuclease activity|0008310||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004713557.1;locus_tag=AD853_RS02060;product=exodeoxyribonuclease I;protein_id=WP_038399971.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 2337 3446 . + . ID=gene-AD853_RS02065;Name=AD853_RS02065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS02065;old_locus_tag=ERS008462_00416 NZ_CPUY01000002.1 Protein Homology CDS 2337 3446 . + 0 ID=cds-WP_038825043.1;Parent=gene-AD853_RS02065;Dbxref=GenBank:WP_038825043.1;Name=WP_038825043.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211905.1;locus_tag=AD853_RS02065;product=SDR family oxidoreductase;protein_id=WP_038825043.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 3880 4197 . + . ID=gene-AD853_RS02070;Name=tmaR;gbkey=Gene;gene=tmaR;gene_biotype=protein_coding;locus_tag=AD853_RS02070;old_locus_tag=ERS008462_00417 NZ_CPUY01000002.1 Protein Homology CDS 3880 4197 . + 0 ID=cds-WP_002217522.1;Parent=gene-AD853_RS02070;Dbxref=GenBank:WP_002217522.1;Name=WP_002217522.1;gbkey=CDS;gene=tmaR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005967626.1;locus_tag=AD853_RS02070;product=PTS system regulator TmaR;protein_id=WP_002217522.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 4336 7563 . - . ID=gene-AD853_RS02075;Name=AD853_RS02075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS02075;old_locus_tag=ERS008462_00418 NZ_CPUY01000002.1 Protein Homology CDS 4336 7563 . - 0 ID=cds-WP_072080738.1;Parent=gene-AD853_RS02075;Dbxref=GenBank:WP_072080738.1;Name=WP_072080738.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304240.1;locus_tag=AD853_RS02075;product=inverse autotransporter beta domain-containing protein;protein_id=WP_072080738.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 8247 8420 . - . ID=gene-AD853_RS21720;Name=AD853_RS21720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS21720 NZ_CPUY01000002.1 Protein Homology CDS 8247 8420 . - 0 ID=cds-WP_164712627.1;Parent=gene-AD853_RS21720;Dbxref=GenBank:WP_164712627.1;Name=WP_164712627.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211910.1;locus_tag=AD853_RS21720;product=hypothetical protein;protein_id=WP_164712627.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 8603 9907 . + . ID=gene-AD853_RS02080;Name=AD853_RS02080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS02080;old_locus_tag=ERS008462_00419 NZ_CPUY01000002.1 Protein Homology CDS 8603 9907 . + 0 ID=cds-WP_038824757.1;Parent=gene-AD853_RS02080;Dbxref=GenBank:WP_038824757.1;Name=WP_038824757.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211911.1;locus_tag=AD853_RS02080;product=MFS transporter;protein_id=WP_038824757.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 9916 10338 . - . ID=gene-AD853_RS02085;Name=AD853_RS02085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS02085;old_locus_tag=ERS008462_00420 NZ_CPUY01000002.1 Protein Homology CDS 9916 10338 . - 0 ID=cds-WP_012304238.1;Parent=gene-AD853_RS02085;Dbxref=GenBank:WP_012304238.1;Name=WP_012304238.1;Ontology_term=GO:0015035;gbkey=CDS;go_function=protein-disulfide reductase activity|0015035||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012413636.1;locus_tag=AD853_RS02085;product=thiol-disulfide oxidoreductase DCC family protein;protein_id=WP_012304238.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 10766 11506 . + . ID=gene-AD853_RS02090;Name=AD853_RS02090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS02090;old_locus_tag=ERS008462_00421 NZ_CPUY01000002.1 Protein Homology CDS 10766 11506 . + 0 ID=cds-WP_002216393.1;Parent=gene-AD853_RS02090;Dbxref=GenBank:WP_002216393.1;Name=WP_002216393.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002216393.1;locus_tag=AD853_RS02090;product=SDR family oxidoreductase;protein_id=WP_002216393.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 11554 12396 . + . ID=gene-AD853_RS02095;Name=AD853_RS02095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS02095;old_locus_tag=ERS008462_00422 NZ_CPUY01000002.1 Protein Homology CDS 11554 12396 . + 0 ID=cds-WP_050124555.1;Parent=gene-AD853_RS02095;Dbxref=GenBank:WP_050124555.1;Name=WP_050124555.1;Ontology_term=GO:0003824,GO:0016787;gbkey=CDS;go_function=catalytic activity|0003824||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192131.1;locus_tag=AD853_RS02095;product=fumarylacetoacetate hydrolase family protein;protein_id=WP_050124555.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 12428 13705 . + . ID=gene-AD853_RS02100;Name=AD853_RS02100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS02100;old_locus_tag=ERS008462_00423 NZ_CPUY01000002.1 Protein Homology CDS 12428 13705 . + 0 ID=cds-WP_002211917.1;Parent=gene-AD853_RS02100;Dbxref=GenBank:WP_002211917.1;Name=WP_002211917.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211917.1;locus_tag=AD853_RS02100;product=L-fuconate dehydratase;protein_id=WP_002211917.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 14020 15165 . + . ID=gene-AD853_RS02105;Name=lldD;gbkey=Gene;gene=lldD;gene_biotype=protein_coding;locus_tag=AD853_RS02105;old_locus_tag=ERS008462_00424 NZ_CPUY01000002.1 Protein Homology CDS 14020 15165 . + 0 ID=cds-WP_050124556.1;Parent=gene-AD853_RS02105;Dbxref=GenBank:WP_050124556.1;Name=WP_050124556.1;Ontology_term=GO:0006089,GO:0004457,GO:0010181;gbkey=CDS;gene=lldD;go_function=lactate dehydrogenase activity|0004457||IEA,FMN binding|0010181||IEA;go_process=lactate metabolic process|0006089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211919.1;locus_tag=AD853_RS02105;product=FMN-dependent L-lactate dehydrogenase LldD;protein_id=WP_050124556.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 15370 16737 . - . ID=gene-AD853_RS02110;Name=argG;gbkey=Gene;gene=argG;gene_biotype=protein_coding;locus_tag=AD853_RS02110;old_locus_tag=ERS008462_00425 NZ_CPUY01000002.1 Protein Homology CDS 15370 16737 . - 0 ID=cds-WP_038825518.1;Parent=gene-AD853_RS02110;Dbxref=GenBank:WP_038825518.1;Name=WP_038825518.1;Ontology_term=GO:0006526,GO:0004055,GO:0005524,GO:0042803;gbkey=CDS;gene=argG;go_function=argininosuccinate synthase activity|0004055||IEA,ATP binding|0005524||IEA,protein homodimerization activity|0042803||IEA;go_process=L-arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016678504.1;locus_tag=AD853_RS02110;product=argininosuccinate synthase;protein_id=WP_038825518.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 17031 18461 . + . ID=gene-AD853_RS02115;Name=AD853_RS02115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS02115;old_locus_tag=ERS008462_00426 NZ_CPUY01000002.1 Protein Homology CDS 17031 18461 . + 0 ID=cds-WP_012105306.1;Parent=gene-AD853_RS02115;Dbxref=GenBank:WP_012105306.1;Name=WP_012105306.1;Ontology_term=GO:0055085,GO:0015297;gbkey=CDS;go_function=antiporter activity|0015297||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002230723.1;locus_tag=AD853_RS02115;product=EmmdR/YeeO family multidrug/toxin efflux MATE transporter;protein_id=WP_012105306.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 18489 19829 . - . ID=gene-AD853_RS02120;Name=AD853_RS02120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS02120;old_locus_tag=ERS008462_00427 NZ_CPUY01000002.1 Protein Homology CDS 18489 19829 . - 0 ID=cds-WP_002211922.1;Parent=gene-AD853_RS02120;Dbxref=GenBank:WP_002211922.1;Name=WP_002211922.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211922.1;locus_tag=AD853_RS02120;product=MFS transporter;protein_id=WP_002211922.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 19865 20746 . - . ID=gene-AD853_RS02125;Name=AD853_RS02125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS02125;old_locus_tag=ERS008462_00428 NZ_CPUY01000002.1 Protein Homology CDS 19865 20746 . - 0 ID=cds-WP_012105305.1;Parent=gene-AD853_RS02125;Dbxref=GenBank:WP_012105305.1;Name=WP_012105305.1;Ontology_term=GO:0005975,GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012229477.1;locus_tag=AD853_RS02125;product=polysaccharide deacetylase family protein;protein_id=WP_012105305.1;transl_table=11 NZ_CPUY01000002.1 RefSeq pseudogene 21314 22010 . + . ID=gene-AD853_RS21455;Name=AD853_RS21455;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD853_RS21455;pseudo=true NZ_CPUY01000002.1 Protein Homology CDS 21314 22010 . + 0 ID=cds-AD853_RS21455;Parent=gene-AD853_RS21455;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002217591.1;locus_tag=AD853_RS21455;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CPUY01000002.1 RefSeq pseudogene 22100 22638 . + . ID=gene-AD853_RS21460;Name=AD853_RS21460;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD853_RS21460;pseudo=true NZ_CPUY01000002.1 Protein Homology CDS 22100 22638 . + 0 ID=cds-AD853_RS21460;Parent=gene-AD853_RS21460;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463057.1;locus_tag=AD853_RS21460;product=DUF2058 domain-containing protein;pseudo=true;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 22968 23043 . - . ID=gene-AD853_RS02140;Name=AD853_RS02140;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD853_RS02140;old_locus_tag=ERS008462_00433 NZ_CPUY01000002.1 tRNAscan-SE tRNA 22968 23043 . - . ID=rna-AD853_RS02140;Parent=gene-AD853_RS02140;anticodon=(pos:complement(23008..23010));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD853_RS02140;product=tRNA-Asn NZ_CPUY01000002.1 tRNAscan-SE exon 22968 23043 . - . ID=exon-AD853_RS02140-1;Parent=rna-AD853_RS02140;anticodon=(pos:complement(23008..23010));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD853_RS02140;product=tRNA-Asn NZ_CPUY01000002.1 RefSeq gene 23489 24118 . - . ID=gene-AD853_RS02145;Name=AD853_RS02145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS02145;old_locus_tag=ERS008462_00434 NZ_CPUY01000002.1 Protein Homology CDS 23489 24118 . - 0 ID=cds-WP_002213125.1;Parent=gene-AD853_RS02145;Dbxref=GenBank:WP_002213125.1;Name=WP_002213125.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002213125.1;locus_tag=AD853_RS02145;product=response regulator transcription factor;protein_id=WP_002213125.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 24376 25668 . - . ID=gene-AD853_RS02150;Name=AD853_RS02150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS02150;old_locus_tag=ERS008462_00435 NZ_CPUY01000002.1 Protein Homology CDS 24376 25668 . - 0 ID=cds-WP_050124557.1;Parent=gene-AD853_RS02150;Dbxref=GenBank:WP_050124557.1;Name=WP_050124557.1;Ontology_term=GO:0008643,GO:0022857,GO:0005886,GO:0016020,GO:0031317;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA,tripartite ATP-independent periplasmic transporter complex|0031317||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002213124.1;locus_tag=AD853_RS02150;product=TRAP transporter large permease;protein_id=WP_050124557.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 25688 26194 . - . ID=gene-AD853_RS02155;Name=AD853_RS02155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS02155;old_locus_tag=ERS008462_00436 NZ_CPUY01000002.1 Protein Homology CDS 25688 26194 . - 0 ID=cds-WP_002213122.1;Parent=gene-AD853_RS02155;Dbxref=GenBank:WP_002213122.1;Name=WP_002213122.1;Ontology_term=GO:0015740,GO:0022857,GO:0005886,GO:0016020,GO:0031317;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA,tripartite ATP-independent periplasmic transporter complex|0031317||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=C4-dicarboxylate transport|0015740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002213122.1;locus_tag=AD853_RS02155;product=TRAP transporter small permease;protein_id=WP_002213122.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 26318 27310 . - . ID=gene-AD853_RS02160;Name=AD853_RS02160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS02160;old_locus_tag=ERS008462_00437 NZ_CPUY01000002.1 Protein Homology CDS 26318 27310 . - 0 ID=cds-WP_002213121.1;Parent=gene-AD853_RS02160;Dbxref=GenBank:WP_002213121.1;Name=WP_002213121.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002264778.1;locus_tag=AD853_RS02160;product=TRAP transporter substrate-binding protein;protein_id=WP_002213121.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 27805 28545 . + . ID=gene-AD853_RS02165;Name=AD853_RS02165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS02165;old_locus_tag=ERS008462_00438 NZ_CPUY01000002.1 Protein Homology CDS 27805 28545 . + 0 ID=cds-WP_002213120.1;Parent=gene-AD853_RS02165;Dbxref=GenBank:WP_002213120.1;Name=WP_002213120.1;Ontology_term=GO:0000287,GO:0008897;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,holo-[acyl-carrier-protein] synthase activity|0008897||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002213120.1;locus_tag=AD853_RS02165;product=4'-phosphopantetheinyl transferase family protein;protein_id=WP_002213120.1;transl_table=11 NZ_CPUY01000002.1 RefSeq pseudogene 28951 29544 . - . ID=gene-AD853_RS02175;Name=AD853_RS02175;end_range=29544,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD853_RS02175;old_locus_tag=ERS008462_00440;partial=true;pseudo=true NZ_CPUY01000002.1 Protein Homology CDS 28951 29544 . - 0 ID=cds-AD853_RS02175;Parent=gene-AD853_RS02175;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=29544,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002230722.1;locus_tag=AD853_RS02175;partial=true;product=alpha-galactosidase;pseudo=true;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 29576 37198 . - . ID=gene-AD853_RS02180;Name=AD853_RS02180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS02180;old_locus_tag=ERS008462_00441 NZ_CPUY01000002.1 Protein Homology CDS 29576 37198 . - 0 ID=cds-WP_038824225.1;Parent=gene-AD853_RS02180;Dbxref=GenBank:WP_038824225.1;Name=WP_038824225.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_104999970.1;locus_tag=AD853_RS02180;product=type I polyketide synthase;protein_id=WP_038824225.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 37286 43384 . - . ID=gene-AD853_RS02185;Name=irp2;gbkey=Gene;gene=irp2;gene_biotype=protein_coding;locus_tag=AD853_RS02185;old_locus_tag=ERS008462_00442 NZ_CPUY01000002.1 Protein Homology CDS 37286 43384 . - 0 ID=cds-WP_038825651.1;Parent=gene-AD853_RS02185;Dbxref=GenBank:WP_038825651.1;Name=WP_038825651.1;Ontology_term=GO:1904091;gbkey=CDS;gene=irp2;go_function=non-ribosomal peptide synthetase activity|1904091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227766.1;locus_tag=AD853_RS02185;product=yersiniabactin non-ribosomal peptide synthetase HMWP2;protein_id=WP_038825651.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 43575 44534 . - . ID=gene-AD853_RS02190;Name=ybtA;gbkey=Gene;gene=ybtA;gene_biotype=protein_coding;locus_tag=AD853_RS02190;old_locus_tag=ERS008462_00443 NZ_CPUY01000002.1 Protein Homology CDS 43575 44534 . - 0 ID=cds-WP_000140406.1;Parent=gene-AD853_RS02190;Dbxref=GenBank:WP_000140406.1;Name=WP_000140406.1;gbkey=CDS;gene=ybtA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227765.1;locus_tag=AD853_RS02190;product=yersiniabactin transcriptional regulator YbtA;protein_id=WP_000140406.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 44791 46503 . + . ID=gene-AD853_RS02195;Name=ybtP;gbkey=Gene;gene=ybtP;gene_biotype=protein_coding;locus_tag=AD853_RS02195;old_locus_tag=ERS008462_00444 NZ_CPUY01000002.1 Protein Homology CDS 44791 46503 . + 0 ID=cds-WP_038824223.1;Parent=gene-AD853_RS02195;Dbxref=GenBank:WP_038824223.1;Name=WP_038824223.1;gbkey=CDS;gene=ybtP;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227764.1;locus_tag=AD853_RS02195;product=yersiniabactin ABC transporter ATP-binding/permease protein YbtP;protein_id=WP_038824223.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 46490 48292 . + . ID=gene-AD853_RS02200;Name=ybtQ;gbkey=Gene;gene=ybtQ;gene_biotype=protein_coding;locus_tag=AD853_RS02200;old_locus_tag=ERS008462_00445 NZ_CPUY01000002.1 Protein Homology CDS 46490 48292 . + 0 ID=cds-WP_038824222.1;Parent=gene-AD853_RS02200;Dbxref=GenBank:WP_038824222.1;Name=WP_038824222.1;gbkey=CDS;gene=ybtQ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227763.1;locus_tag=AD853_RS02200;product=yersiniabactin ABC transporter ATP-binding/permease protein YbtQ;protein_id=WP_038824222.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 48285 49565 . + . ID=gene-AD853_RS02205;Name=ybtX;gbkey=Gene;gene=ybtX;gene_biotype=protein_coding;locus_tag=AD853_RS02205;old_locus_tag=ERS008462_00446 NZ_CPUY01000002.1 Protein Homology CDS 48285 49565 . + 0 ID=cds-WP_001286280.1;Parent=gene-AD853_RS02205;Dbxref=GenBank:WP_001286280.1;Name=WP_001286280.1;gbkey=CDS;gene=ybtX;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227762.1;locus_tag=AD853_RS02205;product=yersiniabactin-associated zinc MFS transporter YbtX;protein_id=WP_001286280.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 49593 50897 . + . ID=gene-AD853_RS02210;Name=ybtS;gbkey=Gene;gene=ybtS;gene_biotype=protein_coding;locus_tag=AD853_RS02210;old_locus_tag=ERS008462_00447 NZ_CPUY01000002.1 Protein Homology CDS 49593 50897 . + 0 ID=cds-WP_000703040.1;Parent=gene-AD853_RS02210;Dbxref=GenBank:WP_000703040.1;Name=WP_000703040.1;gbkey=CDS;gene=ybtS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227761.1;locus_tag=AD853_RS02210;product=yersiniabactin biosynthesis salicylate synthase Irp9/YbtS;protein_id=WP_000703040.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 51091 52353 . - . ID=gene-AD853_RS02215;Name=AD853_RS02215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS02215;old_locus_tag=ERS008462_00448 NZ_CPUY01000002.1 Protein Homology CDS 51091 52353 . - 0 ID=cds-WP_000059622.1;Parent=gene-AD853_RS02215;Dbxref=GenBank:WP_000059622.1;Name=WP_000059622.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227760.1;locus_tag=AD853_RS02215;product=tyrosine-type recombinase/integrase;protein_id=WP_000059622.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 52515 52590 . - . ID=gene-AD853_RS02220;Name=AD853_RS02220;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD853_RS02220;old_locus_tag=ERS008462_00449 NZ_CPUY01000002.1 tRNAscan-SE tRNA 52515 52590 . - . ID=rna-AD853_RS02220;Parent=gene-AD853_RS02220;anticodon=(pos:complement(52555..52557));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD853_RS02220;product=tRNA-Asn NZ_CPUY01000002.1 tRNAscan-SE exon 52515 52590 . - . ID=exon-AD853_RS02220-1;Parent=rna-AD853_RS02220;anticodon=(pos:complement(52555..52557));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD853_RS02220;product=tRNA-Asn NZ_CPUY01000002.1 RefSeq gene 52768 53580 . - . ID=gene-AD853_RS02225;Name=mtfA;gbkey=Gene;gene=mtfA;gene_biotype=protein_coding;locus_tag=AD853_RS02225;old_locus_tag=ERS008462_00450 NZ_CPUY01000002.1 Protein Homology CDS 52768 53580 . - 0 ID=cds-WP_002211042.1;Parent=gene-AD853_RS02225;Dbxref=GenBank:WP_002211042.1;Name=WP_002211042.1;Ontology_term=GO:0008237;gbkey=CDS;gene=mtfA;go_function=metallopeptidase activity|0008237||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211042.1;locus_tag=AD853_RS02225;product=DgsA anti-repressor MtfA;protein_id=WP_002211042.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 53970 54254 . - . ID=gene-AD853_RS02235;Name=AD853_RS02235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS02235;old_locus_tag=ERS008462_00451 NZ_CPUY01000002.1 Protein Homology CDS 53970 54254 . - 0 ID=cds-WP_002211043.1;Parent=gene-AD853_RS02235;Dbxref=GenBank:WP_002211043.1;Name=WP_002211043.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211043.1;locus_tag=AD853_RS02235;product=YciI family protein;protein_id=WP_002211043.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 54491 55342 . - . ID=gene-AD853_RS02240;Name=AD853_RS02240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS02240;old_locus_tag=ERS008462_00452 NZ_CPUY01000002.1 Protein Homology CDS 54491 55342 . - 0 ID=cds-WP_002211044.1;Parent=gene-AD853_RS02240;Dbxref=GenBank:WP_002211044.1;Name=WP_002211044.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211044.1;locus_tag=AD853_RS02240;product=PA4780 family RIO1-like protein kinase;protein_id=WP_002211044.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 55445 57163 . - . ID=gene-AD853_RS02245;Name=AD853_RS02245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS02245;old_locus_tag=ERS008462_00453 NZ_CPUY01000002.1 Protein Homology CDS 55445 57163 . - 0 ID=cds-WP_002211045.1;Parent=gene-AD853_RS02245;Dbxref=GenBank:WP_002211045.1;Name=WP_002211045.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015683658.1;locus_tag=AD853_RS02245;product=ABC transporter ATP-binding protein;protein_id=WP_002211045.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 57819 57983 . + . ID=gene-AD853_RS02250;Name=AD853_RS02250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS02250;old_locus_tag=ERS008462_00454 NZ_CPUY01000002.1 Protein Homology CDS 57819 57983 . + 0 ID=cds-WP_002211047.1;Parent=gene-AD853_RS02250;Dbxref=GenBank:WP_002211047.1;Name=WP_002211047.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211047.1;locus_tag=AD853_RS02250;product=hypothetical protein;protein_id=WP_002211047.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 58065 58451 . - . ID=gene-AD853_RS02255;Name=AD853_RS02255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS02255;old_locus_tag=ERS008462_00455 NZ_CPUY01000002.1 Protein Homology CDS 58065 58451 . - 0 ID=cds-WP_002224436.1;Parent=gene-AD853_RS02255;Dbxref=GenBank:WP_002224436.1;Name=WP_002224436.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002224436.1;locus_tag=AD853_RS02255;product=helix-turn-helix domain-containing protein;protein_id=WP_002224436.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 59007 59246 . + . ID=gene-AD853_RS02265;Name=AD853_RS02265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS02265;old_locus_tag=ERS008462_00457 NZ_CPUY01000002.1 Protein Homology CDS 59007 59246 . + 0 ID=cds-WP_011192141.1;Parent=gene-AD853_RS02265;Dbxref=GenBank:WP_011192141.1;Name=WP_011192141.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005170549.1;locus_tag=AD853_RS02265;product=DUF2766 family protein;protein_id=WP_011192141.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 59337 59570 . - . ID=gene-AD853_RS02270;Name=AD853_RS02270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS02270;old_locus_tag=ERS008462_00458 NZ_CPUY01000002.1 Protein Homology CDS 59337 59570 . - 0 ID=cds-WP_002216493.1;Parent=gene-AD853_RS02270;Dbxref=GenBank:WP_002216493.1;Name=WP_002216493.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013650015.1;locus_tag=AD853_RS02270;product=YobH family protein;protein_id=WP_002216493.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 59806 59949 . + . ID=gene-AD853_RS20165;Name=mgrB;gbkey=Gene;gene=mgrB;gene_biotype=protein_coding;locus_tag=AD853_RS20165 NZ_CPUY01000002.1 Protein Homology CDS 59806 59949 . + 0 ID=cds-WP_002430101.1;Parent=gene-AD853_RS20165;Dbxref=GenBank:WP_002430101.1;Name=WP_002430101.1;Ontology_term=GO:0046677;gbkey=CDS;gene=mgrB;go_process=response to antibiotic|0046677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005170546.1;locus_tag=AD853_RS20165;product=PhoP/PhoQ regulatory lipoprotein MgrB;protein_id=WP_002430101.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 60153 60428 . + . ID=gene-AD853_RS02275;Name=AD853_RS02275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS02275;old_locus_tag=ERS008462_00459 NZ_CPUY01000002.1 Protein Homology CDS 60153 60428 . + 0 ID=cds-WP_024063288.1;Parent=gene-AD853_RS02275;Dbxref=GenBank:WP_024063288.1;Name=WP_024063288.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002216495.1;locus_tag=AD853_RS02275;product=YebO family protein;protein_id=WP_024063288.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 60691 60990 . + . ID=gene-AD853_RS02280;Name=AD853_RS02280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS02280;old_locus_tag=ERS008462_00460 NZ_CPUY01000002.1 Protein Homology CDS 60691 60990 . + 0 ID=cds-WP_038824658.1;Parent=gene-AD853_RS02280;Dbxref=GenBank:WP_038824658.1;Name=WP_038824658.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005163675.1;locus_tag=AD853_RS02280;product=phage protein NinX family protein;protein_id=WP_038824658.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 61099 61344 . + . ID=gene-AD853_RS02285;Name=AD853_RS02285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS02285;old_locus_tag=ERS008462_00461 NZ_CPUY01000002.1 Protein Homology CDS 61099 61344 . + 0 ID=cds-WP_002211054.1;Parent=gene-AD853_RS02285;Dbxref=GenBank:WP_002211054.1;Name=WP_002211054.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211054.1;locus_tag=AD853_RS02285;product=DUF4060 family protein;protein_id=WP_002211054.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 61581 62954 . + . ID=gene-AD853_RS02290;Name=AD853_RS02290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS02290;old_locus_tag=ERS008462_00462 NZ_CPUY01000002.1 Protein Homology CDS 61581 62954 . + 0 ID=cds-WP_002211055.1;Parent=gene-AD853_RS02290;Dbxref=GenBank:WP_002211055.1;Name=WP_002211055.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211055.1;locus_tag=AD853_RS02290;product=amino acid permease;protein_id=WP_002211055.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 63250 63858 . - . ID=gene-AD853_RS02295;Name=pagP;gbkey=Gene;gene=pagP;gene_biotype=protein_coding;locus_tag=AD853_RS02295;old_locus_tag=ERS008462_00463 NZ_CPUY01000002.1 Protein Homology CDS 63250 63858 . - 0 ID=cds-WP_011192143.1;Parent=gene-AD853_RS02295;Dbxref=GenBank:WP_011192143.1;Name=WP_011192143.1;gbkey=CDS;gene=pagP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192143.1;locus_tag=AD853_RS02295;product=lipid IV(A) palmitoyltransferase PagP;protein_id=WP_011192143.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 64860 64976 . + . ID=gene-AD853_RS02305;Name=AD853_RS02305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS02305 NZ_CPUY01000002.1 Protein Homology CDS 64860 64976 . + 0 ID=cds-WP_002211058.1;Parent=gene-AD853_RS02305;Dbxref=GenBank:WP_002211058.1;Name=WP_002211058.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211058.1;locus_tag=AD853_RS02305;product=DUF2627 domain-containing protein;protein_id=WP_002211058.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 65019 65228 . + . ID=gene-AD853_RS02310;Name=cspE;gbkey=Gene;gene=cspE;gene_biotype=protein_coding;gene_synonym=gicA,msmC;locus_tag=AD853_RS02310 NZ_CPUY01000002.1 Protein Homology CDS 65019 65228 . + 0 ID=cds-WP_002221949.1;Parent=gene-AD853_RS02310;Dbxref=GenBank:WP_002221949.1;Name=WP_002221949.1;Ontology_term=GO:0031564,GO:0001072,GO:0003697,GO:0003723;gbkey=CDS;gene=cspE;go_function=transcription antitermination factor activity%2C RNA binding|0001072||IEA,single-stranded DNA binding|0003697||IEA,RNA binding|0003723||IEA;go_process=transcription antitermination|0031564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004094893.1;locus_tag=AD853_RS02310;product=transcription antiterminator/RNA stability regulator CspE;protein_id=WP_002221949.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 65319 66092 . - . ID=gene-AD853_RS02315;Name=pgeF;gbkey=Gene;gene=pgeF;gene_biotype=protein_coding;locus_tag=AD853_RS02315;old_locus_tag=ERS008462_00465 NZ_CPUY01000002.1 Protein Homology CDS 65319 66092 . - 0 ID=cds-WP_012105300.1;Parent=gene-AD853_RS02315;Dbxref=GenBank:WP_012105300.1;Name=WP_012105300.1;gbkey=CDS;gene=pgeF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012413644.1;locus_tag=AD853_RS02315;product=peptidoglycan editing factor PgeF;protein_id=WP_012105300.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 66466 67305 . + . ID=gene-AD853_RS02320;Name=rlmA;gbkey=Gene;gene=rlmA;gene_biotype=protein_coding;locus_tag=AD853_RS02320;old_locus_tag=ERS008462_00466 NZ_CPUY01000002.1 Protein Homology CDS 66466 67305 . + 0 ID=cds-WP_038824656.1;Parent=gene-AD853_RS02320;Dbxref=GenBank:WP_038824656.1;Name=WP_038824656.1;Ontology_term=GO:0008168;gbkey=CDS;gene=rlmA;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211061.1;locus_tag=AD853_RS02320;product=23S rRNA (guanine(745)-N(1))-methyltransferase;protein_id=WP_038824656.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 67527 67805 . - . ID=gene-AD853_RS02325;Name=AD853_RS02325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS02325;old_locus_tag=ERS008462_00467 NZ_CPUY01000002.1 Protein Homology CDS 67527 67805 . - 0 ID=cds-WP_038824655.1;Parent=gene-AD853_RS02325;Dbxref=GenBank:WP_038824655.1;Name=WP_038824655.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013650009.1;locus_tag=AD853_RS02325;product=hypothetical protein;protein_id=WP_038824655.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 68027 70108 . - . ID=gene-AD853_RS02330;Name=AD853_RS02330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS02330;old_locus_tag=ERS008462_00468 NZ_CPUY01000002.1 Protein Homology CDS 68027 70108 . - 0 ID=cds-WP_002211063.1;Parent=gene-AD853_RS02330;Dbxref=GenBank:WP_002211063.1;Name=WP_002211063.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012413645.1;locus_tag=AD853_RS02330;product=PAS domain S-box protein;protein_id=WP_002211063.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 70530 72743 . + . ID=gene-AD853_RS02335;Name=AD853_RS02335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS02335;old_locus_tag=ERS008462_00469 NZ_CPUY01000002.1 Protein Homology CDS 70530 72743 . + 0 ID=cds-WP_038824654.1;Parent=gene-AD853_RS02335;Dbxref=GenBank:WP_038824654.1;Name=WP_038824654.1;Ontology_term=GO:0015343,GO:0038023,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=siderophore-iron transmembrane transporter activity|0015343||IEA,signaling receptor activity|0038023||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211064.1;locus_tag=AD853_RS02335;product=TonB-dependent receptor;protein_id=WP_038824654.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 72920 73489 . - . ID=gene-AD853_RS02340;Name=mntP;gbkey=Gene;gene=mntP;gene_biotype=protein_coding;locus_tag=AD853_RS02340;old_locus_tag=ERS008462_00470 NZ_CPUY01000002.1 Protein Homology CDS 72920 73489 . - 0 ID=cds-WP_002211065.1;Parent=gene-AD853_RS02340;Dbxref=GenBank:WP_002211065.1;Name=WP_002211065.1;gbkey=CDS;gene=mntP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211065.1;locus_tag=AD853_RS02340;product=manganese efflux pump MntP;protein_id=WP_002211065.1;transl_table=11 NZ_CPUY01000002.1 cmsearch riboswitch 73500 73700 . - . ID=id-NZ_CPUY01000002.1:73500..73700;Dbxref=RFAM:RF00080;Note=yybP-ykoY riboswitch is a manganese riboswitch that directly binds Mn;bound_moiety=manganese;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_CPUY01000002.1 RefSeq gene 73919 74380 . - . ID=gene-AD853_RS02345;Name=AD853_RS02345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS02345;old_locus_tag=ERS008462_00471 NZ_CPUY01000002.1 Protein Homology CDS 73919 74380 . - 0 ID=cds-WP_002211066.1;Parent=gene-AD853_RS02345;Dbxref=GenBank:WP_002211066.1;Name=WP_002211066.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005272513.1;locus_tag=AD853_RS02345;product=DUF986 family protein;protein_id=WP_002211066.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 74580 75458 . - . ID=gene-AD853_RS02350;Name=AD853_RS02350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS02350;old_locus_tag=ERS008462_00472 NZ_CPUY01000002.1 Protein Homology CDS 74580 75458 . - 0 ID=cds-WP_002211067.1;Parent=gene-AD853_RS02350;Dbxref=GenBank:WP_002211067.1;Name=WP_002211067.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211067.1;locus_tag=AD853_RS02350;product=PTS mannose transporter subunit IID;protein_id=WP_002211067.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 75474 76271 . - . ID=gene-AD853_RS02355;Name=AD853_RS02355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS02355;old_locus_tag=ERS008462_00473 NZ_CPUY01000002.1 Protein Homology CDS 75474 76271 . - 0 ID=cds-WP_002211068.1;Parent=gene-AD853_RS02355;Dbxref=GenBank:WP_002211068.1;Name=WP_002211068.1;Ontology_term=GO:0009401,GO:0034219,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,carbohydrate transmembrane transport|0034219||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310555.1;locus_tag=AD853_RS02355;product=PTS mannose/fructose/sorbose transporter subunit IIC;protein_id=WP_002211068.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 76363 77337 . - . ID=gene-AD853_RS02360;Name=manX;gbkey=Gene;gene=manX;gene_biotype=protein_coding;locus_tag=AD853_RS02360;old_locus_tag=ERS008462_00474 NZ_CPUY01000002.1 Protein Homology CDS 76363 77337 . - 0 ID=cds-WP_002211069.1;Parent=gene-AD853_RS02360;Dbxref=GenBank:WP_002211069.1;Name=WP_002211069.1;Ontology_term=GO:0009401,GO:0008982;gbkey=CDS;gene=manX;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002218559.1;locus_tag=AD853_RS02360;product=PTS mannose transporter subunit IIAB;protein_id=WP_002211069.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 78048 79592 . + . ID=gene-AD853_RS02365;Name=AD853_RS02365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS02365;old_locus_tag=ERS008462_00475 NZ_CPUY01000002.1 Protein Homology CDS 78048 79592 . + 0 ID=cds-WP_002231099.1;Parent=gene-AD853_RS02365;Dbxref=GenBank:WP_002231099.1;Name=WP_002231099.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019079718.1;locus_tag=AD853_RS02365;product=TerC family protein;protein_id=WP_002231099.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 79693 80160 . - . ID=gene-AD853_RS02370;Name=hpaR;gbkey=Gene;gene=hpaR;gene_biotype=protein_coding;locus_tag=AD853_RS02370;old_locus_tag=ERS008462_00476 NZ_CPUY01000002.1 Protein Homology CDS 79693 80160 . - 0 ID=cds-WP_032466264.1;Parent=gene-AD853_RS02370;Dbxref=GenBank:WP_032466264.1;Name=WP_032466264.1;Ontology_term=GO:0045892,GO:0003677,GO:0003700;gbkey=CDS;gene=hpaR;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211070.1;locus_tag=AD853_RS02370;product=homoprotocatechuate degradation operon regulator HpaR;protein_id=WP_032466264.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 80550 81182 . + . ID=gene-AD853_RS02375;Name=AD853_RS02375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS02375;old_locus_tag=ERS008462_00477 NZ_CPUY01000002.1 Protein Homology CDS 80550 81182 . + 0 ID=cds-WP_038824652.1;Parent=gene-AD853_RS02375;Dbxref=GenBank:WP_038824652.1;Name=WP_038824652.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015683656.1;locus_tag=AD853_RS02375;product=fumarylacetoacetate hydrolase family protein;protein_id=WP_038824652.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 81179 81943 . + . ID=gene-AD853_RS02380;Name=AD853_RS02380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS02380;old_locus_tag=ERS008462_00478 NZ_CPUY01000002.1 Protein Homology CDS 81179 81943 . + 0 ID=cds-WP_002214882.1;Parent=gene-AD853_RS02380;Dbxref=GenBank:WP_002214882.1;Name=WP_002214882.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460074.1;locus_tag=AD853_RS02380;product=fumarylacetoacetate hydrolase family protein;protein_id=WP_002214882.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 81940 83406 . + . ID=gene-AD853_RS02385;Name=hpaE;gbkey=Gene;gene=hpaE;gene_biotype=protein_coding;locus_tag=AD853_RS02385;old_locus_tag=ERS008462_00479 NZ_CPUY01000002.1 Protein Homology CDS 81940 83406 . + 0 ID=cds-WP_038830711.1;Parent=gene-AD853_RS02385;Dbxref=GenBank:WP_038830711.1;Name=WP_038830711.1;Ontology_term=GO:1901023,GO:0018480;gbkey=CDS;gene=hpaE;go_function=5-carboxymethyl-2-hydroxymuconic-semialdehyde dehydrogenase activity|0018480||IEA;go_process=4-hydroxyphenylacetate catabolic process|1901023||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_710092.1;locus_tag=AD853_RS02385;product=5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase;protein_id=WP_038830711.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 83525 84382 . + . ID=gene-AD853_RS02390;Name=hpaD;gbkey=Gene;gene=hpaD;gene_biotype=protein_coding;locus_tag=AD853_RS02390;old_locus_tag=ERS008462_00480 NZ_CPUY01000002.1 Protein Homology CDS 83525 84382 . + 0 ID=cds-WP_038824649.1;Parent=gene-AD853_RS02390;Dbxref=GenBank:WP_038824649.1;Name=WP_038824649.1;Ontology_term=GO:0008152,GO:0008198,GO:0008687;gbkey=CDS;gene=hpaD;go_function=ferrous iron binding|0008198||IEA,3%2C4-dihydroxyphenylacetate 2%2C3-dioxygenase activity|0008687||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211072.1;locus_tag=AD853_RS02390;product=3%2C4-dihydroxyphenylacetate 2%2C3-dioxygenase;protein_id=WP_038824649.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 84407 84805 . + . ID=gene-AD853_RS02395;Name=AD853_RS02395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS02395;old_locus_tag=ERS008462_00481 NZ_CPUY01000002.1 Protein Homology CDS 84407 84805 . + 0 ID=cds-WP_002211073.1;Parent=gene-AD853_RS02395;Dbxref=GenBank:WP_002211073.1;Name=WP_002211073.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211073.1;locus_tag=AD853_RS02395;product=5-carboxymethyl-2-hydroxymuconate Delta-isomerase;protein_id=WP_002211073.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 84799 85602 . + . ID=gene-AD853_RS02400;Name=hpaH;gbkey=Gene;gene=hpaH;gene_biotype=protein_coding;locus_tag=AD853_RS02400;old_locus_tag=ERS008462_00482 NZ_CPUY01000002.1 Protein Homology CDS 84799 85602 . + 0 ID=cds-WP_011192151.1;Parent=gene-AD853_RS02400;Dbxref=GenBank:WP_011192151.1;Name=WP_011192151.1;Ontology_term=GO:0009056,GO:0018817;gbkey=CDS;gene=hpaH;go_function=2-oxo-hept-3-ene-1%2C7-dioate hydratase activity|0018817||IEA;go_process=catabolic process|0009056||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211074.1;locus_tag=AD853_RS02400;product=2-oxo-hept-4-ene-1%2C7-dioate hydratase;protein_id=WP_011192151.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 85613 86419 . + . ID=gene-AD853_RS02405;Name=hpaI;gbkey=Gene;gene=hpaI;gene_biotype=protein_coding;locus_tag=AD853_RS02405;old_locus_tag=ERS008462_00483 NZ_CPUY01000002.1 Protein Homology CDS 85613 86419 . + 0 ID=cds-WP_038824648.1;Parent=gene-AD853_RS02405;Dbxref=GenBank:WP_038824648.1;Name=WP_038824648.1;Ontology_term=GO:0010124;gbkey=CDS;gene=hpaI;go_process=phenylacetate catabolic process|0010124||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002231102.1;locus_tag=AD853_RS02405;product=4-hydroxy-2-oxoheptanedioate aldolase;protein_id=WP_038824648.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 86445 87812 . + . ID=gene-AD853_RS02410;Name=hpaX;gbkey=Gene;gene=hpaX;gene_biotype=protein_coding;locus_tag=AD853_RS02410;old_locus_tag=ERS008462_00484 NZ_CPUY01000002.1 Protein Homology CDS 86445 87812 . + 0 ID=cds-WP_050124558.1;Parent=gene-AD853_RS02410;Dbxref=GenBank:WP_050124558.1;Name=WP_050124558.1;Ontology_term=GO:1900754,GO:1901241;gbkey=CDS;gene=hpaX;go_function=4-hydroxyphenylacetate transmembrane transporter activity|1901241||IEA;go_process=4-hydroxyphenylacetate transport|1900754||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211076.1;locus_tag=AD853_RS02410;product=4-hydroxyphenylacetate permease;protein_id=WP_050124558.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 87880 89442 . + . ID=gene-AD853_RS02415;Name=hpaB;gbkey=Gene;gene=hpaB;gene_biotype=protein_coding;locus_tag=AD853_RS02415;old_locus_tag=ERS008462_00485 NZ_CPUY01000002.1 Protein Homology CDS 87880 89442 . + 0 ID=cds-WP_012105296.1;Parent=gene-AD853_RS02415;Dbxref=GenBank:WP_012105296.1;Name=WP_012105296.1;Ontology_term=GO:0010124,GO:0016712,GO:0050660;gbkey=CDS;gene=hpaB;go_function=oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C reduced flavin or flavoprotein as one donor%2C and incorporation of one atom of oxygen|0016712||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=phenylacetate catabolic process|0010124||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000801462.1;locus_tag=AD853_RS02415;product=4-hydroxyphenylacetate 3-monooxygenase%2C oxygenase component;protein_id=WP_012105296.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 89463 89960 . + . ID=gene-AD853_RS02420;Name=hpaC;gbkey=Gene;gene=hpaC;gene_biotype=protein_coding;locus_tag=AD853_RS02420;old_locus_tag=ERS008462_00486 NZ_CPUY01000002.1 Protein Homology CDS 89463 89960 . + 0 ID=cds-WP_002211078.1;Parent=gene-AD853_RS02420;Dbxref=GenBank:WP_002211078.1;Name=WP_002211078.1;Ontology_term=GO:0042537,GO:0016651,GO:0051287;gbkey=CDS;gene=hpaC;go_function=oxidoreductase activity%2C acting on NAD(P)H|0016651||IEA,NAD binding|0051287||IEA;go_process=benzene-containing compound metabolic process|0042537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211078.1;locus_tag=AD853_RS02420;product=4-hydroxyphenylacetate 3-monooxygenase%2C reductase component;protein_id=WP_002211078.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 90239 91603 . - . ID=gene-AD853_RS02425;Name=AD853_RS02425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS02425;old_locus_tag=ERS008462_00488 NZ_CPUY01000002.1 Protein Homology CDS 90239 91603 . - 0 ID=cds-WP_011192152.1;Parent=gene-AD853_RS02425;Dbxref=GenBank:WP_011192152.1;Name=WP_011192152.1;Ontology_term=GO:0006094,GO:0003941;gbkey=CDS;go_function=L-serine ammonia-lyase activity|0003941||IEA;go_process=gluconeogenesis|0006094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211079.1;locus_tag=AD853_RS02425;product=L-serine ammonia-lyase;protein_id=WP_011192152.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 92331 92930 . - . ID=gene-AD853_RS02430;Name=AD853_RS02430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS02430;old_locus_tag=ERS008462_00489 NZ_CPUY01000002.1 Protein Homology CDS 92331 92930 . - 0 ID=cds-WP_002211080.1;Parent=gene-AD853_RS02430;Dbxref=GenBank:WP_002211080.1;Name=WP_002211080.1;Ontology_term=GO:0000287,GO:0010945;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,coenzyme A diphosphatase activity|0010945||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211080.1;locus_tag=AD853_RS02430;product=CoA pyrophosphatase;protein_id=WP_002211080.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 92927 94303 . - . ID=gene-AD853_RS02435;Name=pabB;gbkey=Gene;gene=pabB;gene_biotype=protein_coding;locus_tag=AD853_RS02435;old_locus_tag=ERS008462_00490 NZ_CPUY01000002.1 Protein Homology CDS 92927 94303 . - 0 ID=cds-WP_038824645.1;Parent=gene-AD853_RS02435;Dbxref=GenBank:WP_038824645.1;Name=WP_038824645.1;Ontology_term=GO:0009396;gbkey=CDS;gene=pabB;go_process=folic acid-containing compound biosynthetic process|0009396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192153.1;locus_tag=AD853_RS02435;product=aminodeoxychorismate synthase component 1;protein_id=WP_038824645.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 94468 94725 . + . ID=gene-AD853_RS02440;Name=AD853_RS02440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS02440;old_locus_tag=ERS008462_00491 NZ_CPUY01000002.1 Protein Homology CDS 94468 94725 . + 0 ID=cds-WP_002211082.1;Parent=gene-AD853_RS02440;Dbxref=GenBank:WP_002211082.1;Name=WP_002211082.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005183031.1;locus_tag=AD853_RS02440;product=YoaH family protein;protein_id=WP_002211082.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 94851 96002 . - . ID=gene-AD853_RS02445;Name=purT;gbkey=Gene;gene=purT;gene_biotype=protein_coding;locus_tag=AD853_RS02445;old_locus_tag=ERS008462_00492 NZ_CPUY01000002.1 Protein Homology CDS 94851 96002 . - 0 ID=cds-WP_038824644.1;Parent=gene-AD853_RS02445;Dbxref=GenBank:WP_038824644.1;Name=WP_038824644.1;Ontology_term=GO:0009152,GO:0000287,GO:0004644,GO:0005524;gbkey=CDS;gene=purT;go_function=magnesium ion binding|0000287||IEA,phosphoribosylglycinamide formyltransferase activity|0004644||IEA,ATP binding|0005524||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211083.1;locus_tag=AD853_RS02445;product=formate-dependent phosphoribosylglycinamide formyltransferase;protein_id=WP_038824644.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 96315 97697 . + . ID=gene-AD853_RS02450;Name=dbpA;gbkey=Gene;gene=dbpA;gene_biotype=protein_coding;locus_tag=AD853_RS02450;old_locus_tag=ERS008462_00493 NZ_CPUY01000002.1 Protein Homology CDS 96315 97697 . + 0 ID=cds-WP_002211084.1;Parent=gene-AD853_RS02450;Dbxref=GenBank:WP_002211084.1;Name=WP_002211084.1;Ontology_term=GO:0003676,GO:0003724,GO:0005524;gbkey=CDS;gene=dbpA;go_function=nucleic acid binding|0003676||IEA,RNA helicase activity|0003724||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192156.1;locus_tag=AD853_RS02450;product=ATP-dependent RNA helicase DbpA;protein_id=WP_002211084.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 97791 98111 . + . ID=gene-AD853_RS02455;Name=AD853_RS02455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS02455;old_locus_tag=ERS008462_00494 NZ_CPUY01000002.1 Protein Homology CDS 97791 98111 . + 0 ID=cds-WP_012105291.1;Parent=gene-AD853_RS02455;Dbxref=GenBank:WP_012105291.1;Name=WP_012105291.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105291.1;locus_tag=AD853_RS02455;product=YebG family protein;protein_id=WP_012105291.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 98151 98459 . + . ID=gene-AD853_RS02460;Name=yqfB;gbkey=Gene;gene=yqfB;gene_biotype=protein_coding;locus_tag=AD853_RS02460;old_locus_tag=ERS008462_00495 NZ_CPUY01000002.1 Protein Homology CDS 98151 98459 . + 0 ID=cds-WP_002211086.1;Parent=gene-AD853_RS02460;Dbxref=GenBank:WP_002211086.1;Name=WP_002211086.1;gbkey=CDS;gene=yqfB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211086.1;locus_tag=AD853_RS02460;product=N(4)-acetylcytidine aminohydrolase;protein_id=WP_002211086.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 98566 98976 . + . ID=gene-AD853_RS02465;Name=yebF;gbkey=Gene;gene=yebF;gene_biotype=protein_coding;locus_tag=AD853_RS02465;old_locus_tag=ERS008462_00496 NZ_CPUY01000002.1 Protein Homology CDS 98566 98976 . + 0 ID=cds-WP_268989581.1;Parent=gene-AD853_RS02465;Dbxref=GenBank:WP_268989581.1;Name=WP_268989581.1;gbkey=CDS;gene=yebF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002403600.1;locus_tag=AD853_RS02465;product=protein YebF;protein_id=WP_268989581.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 99343 101394 . + . ID=gene-AD853_RS02470;Name=AD853_RS02470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS02470;old_locus_tag=ERS008462_00497 NZ_CPUY01000002.1 Protein Homology CDS 99343 101394 . + 0 ID=cds-WP_050124559.1;Parent=gene-AD853_RS02470;Dbxref=GenBank:WP_050124559.1;Name=WP_050124559.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211088.1;locus_tag=AD853_RS02470;product=S9 family peptidase;protein_id=WP_050124559.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 102114 103064 . + . ID=gene-AD853_RS02475;Name=pip;gbkey=Gene;gene=pip;gene_biotype=protein_coding;locus_tag=AD853_RS02475;old_locus_tag=ERS008462_00498 NZ_CPUY01000002.1 Protein Homology CDS 102114 103064 . + 0 ID=cds-WP_011192157.1;Parent=gene-AD853_RS02475;Dbxref=GenBank:WP_011192157.1;Name=WP_011192157.1;Ontology_term=GO:0030163,GO:0004177,GO:0005737;gbkey=CDS;gene=pip;go_component=cytoplasm|0005737||IEA;go_function=aminopeptidase activity|0004177||IEA;go_process=protein catabolic process|0030163||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304225.1;locus_tag=AD853_RS02475;product=prolyl aminopeptidase;protein_id=WP_011192157.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 103124 103354 . - . ID=gene-AD853_RS02480;Name=AD853_RS02480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS02480;old_locus_tag=ERS008462_00499 NZ_CPUY01000002.1 Protein Homology CDS 103124 103354 . - 0 ID=cds-WP_002211091.1;Parent=gene-AD853_RS02480;Dbxref=GenBank:WP_002211091.1;Name=WP_002211091.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211091.1;locus_tag=AD853_RS02480;product=DNA polymerase III subunit theta;protein_id=WP_002211091.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 103755 104264 . + . ID=gene-AD853_RS02485;Name=ftnA;gbkey=Gene;gene=ftnA;gene_biotype=protein_coding;locus_tag=AD853_RS02485;old_locus_tag=ERS008462_00500 NZ_CPUY01000002.1 Protein Homology CDS 103755 104264 . + 0 ID=cds-WP_002211092.1;Parent=gene-AD853_RS02485;Dbxref=GenBank:WP_002211092.1;Name=WP_002211092.1;Ontology_term=GO:0006879,GO:0008199;gbkey=CDS;gene=ftnA;go_function=ferric iron binding|0008199||IEA;go_process=intracellular iron ion homeostasis|0006879||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192158.1;locus_tag=AD853_RS02485;product=non-heme ferritin;protein_id=WP_002211092.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 104643 105029 . + . ID=gene-AD853_RS02490;Name=yobA;gbkey=Gene;gene=yobA;gene_biotype=protein_coding;locus_tag=AD853_RS02490;old_locus_tag=ERS008462_00501 NZ_CPUY01000002.1 Protein Homology CDS 104643 105029 . + 0 ID=cds-WP_002211093.1;Parent=gene-AD853_RS02490;Dbxref=GenBank:WP_002211093.1;Name=WP_002211093.1;Ontology_term=GO:0006825,GO:0046688,GO:0005507;gbkey=CDS;gene=yobA;go_function=copper ion binding|0005507||IEA;go_process=copper ion transport|0006825||IEA,response to copper ion|0046688||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004713112.1;locus_tag=AD853_RS02490;product=CopC domain-containing protein YobA;protein_id=WP_002211093.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 105032 105916 . + . ID=gene-AD853_RS02495;Name=copD;gbkey=Gene;gene=copD;gene_biotype=protein_coding;locus_tag=AD853_RS02495;old_locus_tag=ERS008462_00502 NZ_CPUY01000002.1 Protein Homology CDS 105032 105916 . + 0 ID=cds-WP_038399959.1;Parent=gene-AD853_RS02495;Dbxref=GenBank:WP_038399959.1;Name=WP_038399959.1;Ontology_term=GO:0006825,GO:0016020;gbkey=CDS;gene=copD;go_component=membrane|0016020||IEA;go_process=copper ion transport|0006825||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304224.1;locus_tag=AD853_RS02495;product=copper homeostasis membrane protein CopD;protein_id=WP_038399959.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 106013 106354 . + . ID=gene-AD853_RS02500;Name=AD853_RS02500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS02500;old_locus_tag=ERS008462_00503 NZ_CPUY01000002.1 Protein Homology CDS 106013 106354 . + 0 ID=cds-WP_002211095.1;Parent=gene-AD853_RS02500;Dbxref=GenBank:WP_002211095.1;Name=WP_002211095.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211095.1;locus_tag=AD853_RS02500;product=YebY family protein;protein_id=WP_002211095.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 106877 107203 . - . ID=gene-AD853_RS02510;Name=AD853_RS02510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS02510;old_locus_tag=ERS008462_00506 NZ_CPUY01000002.1 Protein Homology CDS 106877 107203 . - 0 ID=cds-WP_011192279.1;Parent=gene-AD853_RS02510;Dbxref=GenBank:WP_011192279.1;Name=WP_011192279.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011816445.1;locus_tag=AD853_RS02510;product=DUF1493 family protein;protein_id=WP_011192279.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 107197 107661 . - . ID=gene-AD853_RS02515;Name=AD853_RS02515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS02515;old_locus_tag=ERS008462_00507 NZ_CPUY01000002.1 Protein Homology CDS 107197 107661 . - 0 ID=cds-WP_011192280.1;Parent=gene-AD853_RS02515;Dbxref=GenBank:WP_011192280.1;Name=WP_011192280.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211098.1;locus_tag=AD853_RS02515;product=STM2901 family protein;protein_id=WP_011192280.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 108069 109229 . + . ID=gene-AD853_RS02520;Name=flhB;gbkey=Gene;gene=flhB;gene_biotype=protein_coding;locus_tag=AD853_RS02520;old_locus_tag=ERS008462_00508 NZ_CPUY01000002.1 Protein Homology CDS 108069 109229 . + 0 ID=cds-WP_002211099.1;Parent=gene-AD853_RS02520;Dbxref=GenBank:WP_002211099.1;Name=WP_002211099.1;Ontology_term=GO:0015031,GO:0044780,GO:0016020;gbkey=CDS;gene=flhB;go_component=membrane|0016020||IEA;go_process=protein transport|0015031||IEA,bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002218135.1;locus_tag=AD853_RS02520;product=flagellar biosynthesis protein FlhB;protein_id=WP_002211099.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 109229 111307 . + . ID=gene-AD853_RS02525;Name=flhA;gbkey=Gene;gene=flhA;gene_biotype=protein_coding;locus_tag=AD853_RS02525;old_locus_tag=ERS008462_00509 NZ_CPUY01000002.1 Protein Homology CDS 109229 111307 . + 0 ID=cds-WP_012413652.1;Parent=gene-AD853_RS02525;Dbxref=GenBank:WP_012413652.1;Name=WP_012413652.1;Ontology_term=GO:0044780,GO:0016020;gbkey=CDS;gene=flhA;go_component=membrane|0016020||IEA;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012413652.1;locus_tag=AD853_RS02525;product=flagellar biosynthesis protein FlhA;protein_id=WP_012413652.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 111307 111729 . + . ID=gene-AD853_RS02530;Name=AD853_RS02530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS02530;old_locus_tag=ERS008462_00510 NZ_CPUY01000002.1 Protein Homology CDS 111307 111729 . + 0 ID=cds-WP_050124560.1;Parent=gene-AD853_RS02530;Dbxref=GenBank:WP_050124560.1;Name=WP_050124560.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211101.1;locus_tag=AD853_RS02530;product=flagellar protein FlhE;protein_id=WP_050124560.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 112391 115294 . + . ID=gene-AD853_RS02540;Name=inv;gbkey=Gene;gene=inv;gene_biotype=protein_coding;locus_tag=AD853_RS02540;old_locus_tag=ERS008462_00511 NZ_CPUY01000002.1 Protein Homology CDS 112391 115294 . + 0 ID=cds-WP_223847749.1;Parent=gene-AD853_RS02540;Dbxref=GenBank:WP_223847749.1;Name=WP_223847749.1;gbkey=CDS;gene=inv;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304222.1;locus_tag=AD853_RS02540;product=inverse autotransporter invasin Inv;protein_id=WP_223847749.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 115474 115914 . - . ID=gene-AD853_RS02545;Name=AD853_RS02545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS02545;old_locus_tag=ERS008462_00512 NZ_CPUY01000002.1 Protein Homology CDS 115474 115914 . - 0 ID=cds-WP_012105285.1;Parent=gene-AD853_RS02545;Dbxref=GenBank:WP_012105285.1;Name=WP_012105285.1;Ontology_term=GO:0044780;gbkey=CDS;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211107.1;locus_tag=AD853_RS02545;product=flagella synthesis protein FlgN;protein_id=WP_012105285.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 115933 116235 . - . ID=gene-AD853_RS02550;Name=flgM;gbkey=Gene;gene=flgM;gene_biotype=protein_coding;locus_tag=AD853_RS02550;old_locus_tag=ERS008462_00513 NZ_CPUY01000002.1 Protein Homology CDS 115933 116235 . - 0 ID=cds-WP_002211108.1;Parent=gene-AD853_RS02550;Dbxref=GenBank:WP_002211108.1;Name=WP_002211108.1;Ontology_term=GO:0045892;gbkey=CDS;gene=flgM;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211108.1;locus_tag=AD853_RS02550;product=flagellar biosynthesis anti-sigma factor FlgM;protein_id=WP_002211108.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 116386 117099 . - . ID=gene-AD853_RS02555;Name=flgA;gbkey=Gene;gene=flgA;gene_biotype=protein_coding;locus_tag=AD853_RS02555;old_locus_tag=ERS008462_00514 NZ_CPUY01000002.1 Protein Homology CDS 116386 117099 . - 0 ID=cds-WP_038401552.1;Parent=gene-AD853_RS02555;Dbxref=GenBank:WP_038401552.1;Name=WP_038401552.1;Ontology_term=GO:0001539,GO:0005198,GO:0009428;gbkey=CDS;gene=flgA;go_component=bacterial-type flagellum basal body%2C distal rod%2C P ring|0009428||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105284.1;locus_tag=AD853_RS02555;product=flagellar basal body P-ring formation chaperone FlgA;protein_id=WP_038401552.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 117338 117751 . + . ID=gene-AD853_RS02560;Name=flgB;gbkey=Gene;gene=flgB;gene_biotype=protein_coding;locus_tag=AD853_RS02560;old_locus_tag=ERS008462_00515 NZ_CPUY01000002.1 Protein Homology CDS 117338 117751 . + 0 ID=cds-WP_050124561.1;Parent=gene-AD853_RS02560;Dbxref=GenBank:WP_050124561.1;Name=WP_050124561.1;Ontology_term=GO:0071973,GO:0030694;gbkey=CDS;gene=flgB;go_component=bacterial-type flagellum basal body%2C rod|0030694||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004392144.1;locus_tag=AD853_RS02560;product=flagellar basal body rod protein FlgB;protein_id=WP_050124561.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 117757 118161 . + . ID=gene-AD853_RS02565;Name=flgC;gbkey=Gene;gene=flgC;gene_biotype=protein_coding;locus_tag=AD853_RS02565;old_locus_tag=ERS008462_00516 NZ_CPUY01000002.1 Protein Homology CDS 117757 118161 . + 0 ID=cds-WP_038823775.1;Parent=gene-AD853_RS02565;Dbxref=GenBank:WP_038823775.1;Name=WP_038823775.1;Ontology_term=GO:0071973,GO:0030694;gbkey=CDS;gene=flgC;go_component=bacterial-type flagellum basal body%2C rod|0030694||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309479.1;locus_tag=AD853_RS02565;product=flagellar basal body rod protein FlgC;protein_id=WP_038823775.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 118176 118862 . + . ID=gene-AD853_RS02570;Name=flgD;gbkey=Gene;gene=flgD;gene_biotype=protein_coding;locus_tag=AD853_RS02570;old_locus_tag=ERS008462_00517 NZ_CPUY01000002.1 Protein Homology CDS 118176 118862 . + 0 ID=cds-WP_011192164.1;Parent=gene-AD853_RS02570;Dbxref=GenBank:WP_011192164.1;Name=WP_011192164.1;gbkey=CDS;gene=flgD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012229538.1;locus_tag=AD853_RS02570;product=flagellar hook assembly protein FlgD;protein_id=WP_011192164.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 119064 120350 . + . ID=gene-AD853_RS02575;Name=flgE;gbkey=Gene;gene=flgE;gene_biotype=protein_coding;locus_tag=AD853_RS02575;old_locus_tag=ERS008462_00518 NZ_CPUY01000002.1 Protein Homology CDS 119064 120350 . + 0 ID=cds-WP_002211113.1;Parent=gene-AD853_RS02575;Dbxref=GenBank:WP_002211113.1;Name=WP_002211113.1;gbkey=CDS;gene=flgE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211113.1;locus_tag=AD853_RS02575;product=flagellar hook protein FlgE;protein_id=WP_002211113.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 120372 121127 . + . ID=gene-AD853_RS02580;Name=AD853_RS02580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS02580;old_locus_tag=ERS008462_00519 NZ_CPUY01000002.1 Protein Homology CDS 120372 121127 . + 0 ID=cds-WP_011192165.1;Parent=gene-AD853_RS02580;Dbxref=GenBank:WP_011192165.1;Name=WP_011192165.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012413655.1;locus_tag=AD853_RS02580;product=flagellar basal body rod protein FlgF;protein_id=WP_011192165.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 121153 121935 . + . ID=gene-AD853_RS02585;Name=flgG;gbkey=Gene;gene=flgG;gene_biotype=protein_coding;locus_tag=AD853_RS02585;old_locus_tag=ERS008462_00520 NZ_CPUY01000002.1 Protein Homology CDS 121153 121935 . + 0 ID=cds-WP_011192166.1;Parent=gene-AD853_RS02585;Dbxref=GenBank:WP_011192166.1;Name=WP_011192166.1;Ontology_term=GO:0071973,GO:0009426;gbkey=CDS;gene=flgG;go_component=bacterial-type flagellum basal body%2C distal rod|0009426||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006819466.1;locus_tag=AD853_RS02585;product=flagellar basal-body rod protein FlgG;protein_id=WP_011192166.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 122079 122768 . + . ID=gene-AD853_RS02590;Name=flgH;gbkey=Gene;gene=flgH;gene_biotype=protein_coding;locus_tag=AD853_RS02590;old_locus_tag=ERS008462_00521 NZ_CPUY01000002.1 Protein Homology CDS 122079 122768 . + 0 ID=cds-WP_002211116.1;Parent=gene-AD853_RS02590;Dbxref=GenBank:WP_002211116.1;Name=WP_002211116.1;Ontology_term=GO:0071973,GO:0003774,GO:0009427;gbkey=CDS;gene=flgH;go_component=bacterial-type flagellum basal body%2C distal rod%2C L ring|0009427||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211116.1;locus_tag=AD853_RS02590;product=flagellar basal body L-ring protein FlgH;protein_id=WP_002211116.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 122783 123892 . + . ID=gene-AD853_RS02595;Name=AD853_RS02595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS02595;old_locus_tag=ERS008462_00522 NZ_CPUY01000002.1 Protein Homology CDS 122783 123892 . + 0 ID=cds-WP_002211117.1;Parent=gene-AD853_RS02595;Dbxref=GenBank:WP_002211117.1;Name=WP_002211117.1;Ontology_term=GO:0071973,GO:0005198,GO:0009428,GO:0030288;gbkey=CDS;go_component=bacterial-type flagellum basal body%2C distal rod%2C P ring|0009428||IEA,outer membrane-bounded periplasmic space|0030288||IEA;go_function=structural molecule activity|0005198||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211117.1;locus_tag=AD853_RS02595;product=flagellar basal body P-ring protein FlgI;protein_id=WP_002211117.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 123892 124836 . + . ID=gene-AD853_RS02600;Name=flgJ;gbkey=Gene;gene=flgJ;gene_biotype=protein_coding;locus_tag=AD853_RS02600;old_locus_tag=ERS008462_00523 NZ_CPUY01000002.1 Protein Homology CDS 123892 124836 . + 0 ID=cds-WP_002211118.1;Parent=gene-AD853_RS02600;Dbxref=GenBank:WP_002211118.1;Name=WP_002211118.1;Ontology_term=GO:0044780,GO:0016798;gbkey=CDS;gene=flgJ;go_function=hydrolase activity%2C acting on glycosyl bonds|0016798||IEA;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012229539.1;locus_tag=AD853_RS02600;product=flagellar assembly peptidoglycan hydrolase FlgJ;protein_id=WP_002211118.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 125135 126799 . + . ID=gene-AD853_RS02605;Name=flgK;gbkey=Gene;gene=flgK;gene_biotype=protein_coding;locus_tag=AD853_RS02605;old_locus_tag=ERS008462_00524 NZ_CPUY01000002.1 Protein Homology CDS 125135 126799 . + 0 ID=cds-WP_002211119.1;Parent=gene-AD853_RS02605;Dbxref=GenBank:WP_002211119.1;Name=WP_002211119.1;Ontology_term=GO:0044780,GO:0005198,GO:0009424;gbkey=CDS;gene=flgK;go_component=bacterial-type flagellum hook|0009424||IEA;go_function=structural molecule activity|0005198||IEA;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304220.1;locus_tag=AD853_RS02605;product=flagellar hook-associated protein FlgK;protein_id=WP_002211119.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 126938 127918 . + . ID=gene-AD853_RS02610;Name=flgL;gbkey=Gene;gene=flgL;gene_biotype=protein_coding;locus_tag=AD853_RS02610;old_locus_tag=ERS008462_00525 NZ_CPUY01000002.1 Protein Homology CDS 126938 127918 . + 0 ID=cds-WP_002211120.1;Parent=gene-AD853_RS02610;Dbxref=GenBank:WP_002211120.1;Name=WP_002211120.1;Ontology_term=GO:0001539,GO:0005198,GO:0009424;gbkey=CDS;gene=flgL;go_component=bacterial-type flagellum hook|0009424||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211120.1;locus_tag=AD853_RS02610;product=flagellar hook-associated protein FlgL;protein_id=WP_002211120.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 127947 128948 . - . ID=gene-AD853_RS02615;Name=AD853_RS02615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS02615;old_locus_tag=ERS008462_00526 NZ_CPUY01000002.1 Protein Homology CDS 127947 128948 . - 0 ID=cds-WP_002211121.1;Parent=gene-AD853_RS02615;Dbxref=GenBank:WP_002211121.1;Name=WP_002211121.1;Ontology_term=GO:0006355,GO:0003677,GO:0030246;gbkey=CDS;go_function=DNA binding|0003677||IEA,carbohydrate binding|0030246||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211121.1;locus_tag=AD853_RS02615;product=sugar-binding transcriptional regulator;protein_id=WP_002211121.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 129166 131232 . + . ID=gene-AD853_RS02620;Name=AD853_RS02620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS02620;old_locus_tag=ERS008462_00527 NZ_CPUY01000002.1 Protein Homology CDS 129166 131232 . + 0 ID=cds-WP_038823776.1;Parent=gene-AD853_RS02620;Dbxref=GenBank:WP_038823776.1;Name=WP_038823776.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211122.1;locus_tag=AD853_RS02620;product=bifunctional aldolase/short-chain dehydrogenase;protein_id=WP_038823776.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 131362 132420 . + . ID=gene-AD853_RS02625;Name=AD853_RS02625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS02625;old_locus_tag=ERS008462_00528 NZ_CPUY01000002.1 Protein Homology CDS 131362 132420 . + 0 ID=cds-WP_050124562.1;Parent=gene-AD853_RS02625;Dbxref=GenBank:WP_050124562.1;Name=WP_050124562.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016674240.1;locus_tag=AD853_RS02625;product=ABC transporter permease;protein_id=WP_050124562.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 132463 133458 . + . ID=gene-AD853_RS02630;Name=AD853_RS02630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS02630;old_locus_tag=ERS008462_00529 NZ_CPUY01000002.1 Protein Homology CDS 132463 133458 . + 0 ID=cds-WP_038823777.1;Parent=gene-AD853_RS02630;Dbxref=GenBank:WP_038823777.1;Name=WP_038823777.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211125.1;locus_tag=AD853_RS02630;product=substrate-binding domain-containing protein;protein_id=WP_038823777.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 133524 135101 . + . ID=gene-AD853_RS02635;Name=AD853_RS02635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS02635;old_locus_tag=ERS008462_00530 NZ_CPUY01000002.1 Protein Homology CDS 133524 135101 . + 0 ID=cds-WP_050124563.1;Parent=gene-AD853_RS02635;Dbxref=GenBank:WP_050124563.1;Name=WP_050124563.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012413661.1;locus_tag=AD853_RS02635;product=sugar ABC transporter ATP-binding protein;protein_id=WP_050124563.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 135104 136126 . + . ID=gene-AD853_RS02640;Name=AD853_RS02640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS02640;old_locus_tag=ERS008462_00531 NZ_CPUY01000002.1 Protein Homology CDS 135104 136126 . + 0 ID=cds-WP_038823779.1;Parent=gene-AD853_RS02640;Dbxref=GenBank:WP_038823779.1;Name=WP_038823779.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192171.1;locus_tag=AD853_RS02640;product=ABC transporter permease;protein_id=WP_038823779.1;transl_table=11 NZ_CPUY01000002.1 RefSeq pseudogene 136175 137108 . + . ID=gene-AD853_RS02645;Name=AD853_RS02645;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD853_RS02645;old_locus_tag=ERS008462_00533;pseudo=true NZ_CPUY01000002.1 Protein Homology CDS 136175 137108 . + 0 ID=cds-AD853_RS02645;Parent=gene-AD853_RS02645;Note=frameshifted;Ontology_term=GO:0005975,GO:0019200,GO:0005829;gbkey=CDS;go_component=cytosol|0005829||IEA;go_function=carbohydrate kinase activity|0019200||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192172.1;locus_tag=AD853_RS02645;product=sugar kinase;pseudo=true;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 137366 137785 . - . ID=gene-AD853_RS02650;Name=AD853_RS02650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS02650;old_locus_tag=ERS008462_00534 NZ_CPUY01000002.1 Protein Homology CDS 137366 137785 . - 0 ID=cds-WP_002211129.1;Parent=gene-AD853_RS02650;Dbxref=GenBank:WP_002211129.1;Name=WP_002211129.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211129.1;locus_tag=AD853_RS02650;product=type II toxin-antitoxin system HicB family antitoxin;protein_id=WP_002211129.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 137830 138012 . - . ID=gene-AD853_RS02655;Name=AD853_RS02655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS02655;old_locus_tag=ERS008462_00535 NZ_CPUY01000002.1 Protein Homology CDS 137830 138012 . - 0 ID=cds-WP_002214976.1;Parent=gene-AD853_RS02655;Dbxref=GenBank:WP_002214976.1;Name=WP_002214976.1;Ontology_term=GO:0003729;gbkey=CDS;go_function=mRNA binding|0003729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002214976.1;locus_tag=AD853_RS02655;product=type II toxin-antitoxin system HicA family toxin;protein_id=WP_002214976.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 138219 139001 . - . ID=gene-AD853_RS02660;Name=fliR;gbkey=Gene;gene=fliR;gene_biotype=protein_coding;locus_tag=AD853_RS02660;old_locus_tag=ERS008462_00536 NZ_CPUY01000002.1 Protein Homology CDS 138219 139001 . - 0 ID=cds-WP_002211130.1;Parent=gene-AD853_RS02660;Dbxref=GenBank:WP_002211130.1;Name=WP_002211130.1;Ontology_term=GO:0006605,GO:0044780,GO:0016020;gbkey=CDS;gene=fliR;go_component=membrane|0016020||IEA;go_process=protein targeting|0006605||IEA,bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211130.1;locus_tag=AD853_RS02660;product=flagellar biosynthetic protein FliR;protein_id=WP_002211130.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 139004 139273 . - . ID=gene-AD853_RS02665;Name=fliQ;gbkey=Gene;gene=fliQ;gene_biotype=protein_coding;locus_tag=AD853_RS02665;old_locus_tag=ERS008462_00537 NZ_CPUY01000002.1 Protein Homology CDS 139004 139273 . - 0 ID=cds-WP_002211131.1;Parent=gene-AD853_RS02665;Dbxref=GenBank:WP_002211131.1;Name=WP_002211131.1;Ontology_term=GO:0044780,GO:0016020;gbkey=CDS;gene=fliQ;go_component=membrane|0016020||IEA;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211131.1;locus_tag=AD853_RS02665;product=flagellar biosynthesis protein FliQ;protein_id=WP_002211131.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 139379 140119 . - . ID=gene-AD853_RS02670;Name=fliP;gbkey=Gene;gene=fliP;gene_biotype=protein_coding;locus_tag=AD853_RS02670;old_locus_tag=ERS008462_00538 NZ_CPUY01000002.1 Protein Homology CDS 139379 140119 . - 0 ID=cds-WP_002220494.1;Parent=gene-AD853_RS02670;Dbxref=GenBank:WP_002220494.1;Name=WP_002220494.1;Note=The bacterial flagellar biogenesis protein FliP forms a type III secretion system (T3SS)-type pore required for flagellar assembly.;Ontology_term=GO:0009306,GO:0016020;gbkey=CDS;gene=fliP;go_component=membrane|0016020||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002220494.1;locus_tag=AD853_RS02670;product=flagellar type III secretion system pore protein FliP;protein_id=WP_002220494.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 140200 140736 . - . ID=gene-AD853_RS02675;Name=fliO;gbkey=Gene;gene=fliO;gene_biotype=protein_coding;locus_tag=AD853_RS02675;old_locus_tag=ERS008462_00539 NZ_CPUY01000002.1 Protein Homology CDS 140200 140736 . - 0 ID=cds-WP_038831553.1;Parent=gene-AD853_RS02675;Dbxref=GenBank:WP_038831553.1;Name=WP_038831553.1;Ontology_term=GO:0044781,GO:0016020;gbkey=CDS;gene=fliO;go_component=membrane|0016020||IEA;go_process=bacterial-type flagellum organization|0044781||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002231108.1;locus_tag=AD853_RS02675;product=flagellar biosynthetic protein FliO;protein_id=WP_038831553.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 140736 141152 . - . ID=gene-AD853_RS02680;Name=fliN;gbkey=Gene;gene=fliN;gene_biotype=protein_coding;locus_tag=AD853_RS02680;old_locus_tag=ERS008462_00540 NZ_CPUY01000002.1 Protein Homology CDS 140736 141152 . - 0 ID=cds-WP_011192176.1;Parent=gene-AD853_RS02680;Dbxref=GenBank:WP_011192176.1;Name=WP_011192176.1;Ontology_term=GO:0001539,GO:0003774,GO:0009288,GO:0016020;gbkey=CDS;gene=fliN;go_component=bacterial-type flagellum|0009288||IEA,membrane|0016020||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004961501.1;locus_tag=AD853_RS02680;product=flagellar motor switch protein FliN;protein_id=WP_011192176.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 141149 142150 . - . ID=gene-AD853_RS02685;Name=fliM;gbkey=Gene;gene=fliM;gene_biotype=protein_coding;locus_tag=AD853_RS02685;old_locus_tag=ERS008462_00541 NZ_CPUY01000002.1 Protein Homology CDS 141149 142150 . - 0 ID=cds-WP_002211135.1;Parent=gene-AD853_RS02685;Dbxref=GenBank:WP_002211135.1;Name=WP_002211135.1;Ontology_term=GO:0001539,GO:0009288;gbkey=CDS;gene=fliM;go_component=bacterial-type flagellum|0009288||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005127760.1;locus_tag=AD853_RS02685;product=flagellar motor switch protein FliM;protein_id=WP_002211135.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 142156 142626 . - . ID=gene-AD853_RS02690;Name=fliL;gbkey=Gene;gene=fliL;gene_biotype=protein_coding;locus_tag=AD853_RS02690;old_locus_tag=ERS008462_00542 NZ_CPUY01000002.1 Protein Homology CDS 142156 142626 . - 0 ID=cds-WP_002227961.1;Parent=gene-AD853_RS02690;Dbxref=GenBank:WP_002227961.1;Name=WP_002227961.1;Ontology_term=GO:0006935,GO:0071973,GO:0009425;gbkey=CDS;gene=fliL;go_component=bacterial-type flagellum basal body|0009425||IEA;go_process=chemotaxis|0006935||IEA,bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004700936.1;locus_tag=AD853_RS02690;product=flagellar basal body-associated protein FliL;protein_id=WP_002227961.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 142874 144214 . - . ID=gene-AD853_RS02695;Name=AD853_RS02695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS02695;old_locus_tag=ERS008462_00543 NZ_CPUY01000002.1 Protein Homology CDS 142874 144214 . - 0 ID=cds-WP_038823781.1;Parent=gene-AD853_RS02695;Dbxref=GenBank:WP_038823781.1;Name=WP_038823781.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012413663.1;locus_tag=AD853_RS02695;product=flagellar hook-length control protein FliK;protein_id=WP_038823781.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 144211 144657 . - . ID=gene-AD853_RS02700;Name=fliJ;gbkey=Gene;gene=fliJ;gene_biotype=protein_coding;locus_tag=AD853_RS02700;old_locus_tag=ERS008462_00544 NZ_CPUY01000002.1 Protein Homology CDS 144211 144657 . - 0 ID=cds-WP_002211139.1;Parent=gene-AD853_RS02700;Dbxref=GenBank:WP_002211139.1;Name=WP_002211139.1;Ontology_term=GO:0071973,GO:0003774,GO:0009288;gbkey=CDS;gene=fliJ;go_component=bacterial-type flagellum|0009288||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304216.1;locus_tag=AD853_RS02700;product=flagellar export protein FliJ;protein_id=WP_002211139.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 144733 146151 . - . ID=gene-AD853_RS02705;Name=fliI;gbkey=Gene;gene=fliI;gene_biotype=protein_coding;locus_tag=AD853_RS02705;old_locus_tag=ERS008462_00545 NZ_CPUY01000002.1 Protein Homology CDS 144733 146151 . - 0 ID=cds-WP_038823782.1;Parent=gene-AD853_RS02705;Dbxref=GenBank:WP_038823782.1;Name=WP_038823782.1;Ontology_term=GO:0044780,GO:0071973,GO:0016887;gbkey=CDS;gene=fliI;go_function=ATP hydrolysis activity|0016887||IEA;go_process=bacterial-type flagellum assembly|0044780||IEA,bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004708193.1;locus_tag=AD853_RS02705;product=flagellar protein export ATPase FliI;protein_id=WP_038823782.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 146151 146867 . - . ID=gene-AD853_RS02710;Name=fliH;gbkey=Gene;gene=fliH;gene_biotype=protein_coding;locus_tag=AD853_RS02710;old_locus_tag=ERS008462_00546 NZ_CPUY01000002.1 Protein Homology CDS 146151 146867 . - 0 ID=cds-WP_002211141.1;Parent=gene-AD853_RS02710;Dbxref=GenBank:WP_002211141.1;Name=WP_002211141.1;Ontology_term=GO:0071973,GO:0003774,GO:0009288;gbkey=CDS;gene=fliH;go_component=bacterial-type flagellum|0009288||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211141.1;locus_tag=AD853_RS02710;product=flagellar assembly protein FliH;protein_id=WP_002211141.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 146860 147852 . - . ID=gene-AD853_RS02715;Name=fliG;gbkey=Gene;gene=fliG;gene_biotype=protein_coding;locus_tag=AD853_RS02715;old_locus_tag=ERS008462_00547 NZ_CPUY01000002.1 Protein Homology CDS 146860 147852 . - 0 ID=cds-WP_002211142.1;Parent=gene-AD853_RS02715;Dbxref=GenBank:WP_002211142.1;Name=WP_002211142.1;Ontology_term=GO:0006935,GO:0071973,GO:0003774,GO:0009288;gbkey=CDS;gene=fliG;go_component=bacterial-type flagellum|0009288||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=chemotaxis|0006935||IEA,bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211142.1;locus_tag=AD853_RS02715;product=flagellar motor switch protein FliG;protein_id=WP_002211142.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 147849 149561 . - . ID=gene-AD853_RS02720;Name=fliF;gbkey=Gene;gene=fliF;gene_biotype=protein_coding;locus_tag=AD853_RS02720;old_locus_tag=ERS008462_00548 NZ_CPUY01000002.1 Protein Homology CDS 147849 149561 . - 0 ID=cds-WP_038823783.1;Parent=gene-AD853_RS02720;Dbxref=GenBank:WP_038823783.1;Name=WP_038823783.1;Ontology_term=GO:0001539,GO:0005198,GO:0009431;gbkey=CDS;gene=fliF;go_component=bacterial-type flagellum basal body%2C MS ring|0009431||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016588484.1;locus_tag=AD853_RS02720;product=flagellar basal-body MS-ring/collar protein FliF;protein_id=WP_038823783.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 149914 150225 . + . ID=gene-AD853_RS02725;Name=fliE;gbkey=Gene;gene=fliE;gene_biotype=protein_coding;locus_tag=AD853_RS02725;old_locus_tag=ERS008462_00549 NZ_CPUY01000002.1 Protein Homology CDS 149914 150225 . + 0 ID=cds-WP_002211144.1;Parent=gene-AD853_RS02725;Dbxref=GenBank:WP_002211144.1;Name=WP_002211144.1;Ontology_term=GO:0071973,GO:0003774,GO:0009431;gbkey=CDS;gene=fliE;go_component=bacterial-type flagellum basal body%2C MS ring|0009431||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005160376.1;locus_tag=AD853_RS02725;product=flagellar hook-basal body complex protein FliE;protein_id=WP_002211144.1;transl_table=11 NZ_CPUY01000002.1 RefSeq pseudogene 150337 150507 . + . ID=gene-AD853_RS20180;Name=AD853_RS20180;end_range=150507,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD853_RS20180;partial=true;pseudo=true;start_range=.,150337 NZ_CPUY01000002.1 Protein Homology CDS 150337 150507 . + 0 ID=cds-AD853_RS20180;Parent=gene-AD853_RS20180;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=150507,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211708.1;locus_tag=AD853_RS20180;partial=true;product=peptidase P60;pseudo=true;start_range=.,150337;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 150661 150840 . + . ID=gene-AD853_RS02730;Name=AD853_RS02730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS02730;old_locus_tag=ERS008462_00550 NZ_CPUY01000002.1 Protein Homology CDS 150661 150840 . + 0 ID=cds-WP_002215991.1;Parent=gene-AD853_RS02730;Dbxref=GenBank:WP_002215991.1;Name=WP_002215991.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016156674.1;locus_tag=AD853_RS02730;product=hypothetical protein;protein_id=WP_002215991.1;transl_table=11 NZ_CPUY01000002.1 RefSeq pseudogene 150851 151291 . + . ID=gene-AD853_RS02735;Name=AD853_RS02735;end_range=151291,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD853_RS02735;old_locus_tag=ERS008462_00551;partial=true;pseudo=true NZ_CPUY01000002.1 Protein Homology CDS 150851 151291 . + 0 ID=cds-AD853_RS02735;Parent=gene-AD853_RS02735;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=151291,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002215992.1;locus_tag=AD853_RS02735;partial=true;product=type II toxin-antitoxin system death-on-curing family toxin;pseudo=true;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 151456 152067 . - . ID=gene-AD853_RS02740;Name=AD853_RS02740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS02740;old_locus_tag=ERS008462_00552 NZ_CPUY01000002.1 Protein Homology CDS 151456 152067 . - 0 ID=cds-WP_038823784.1;Parent=gene-AD853_RS02740;Dbxref=GenBank:WP_038823784.1;Name=WP_038823784.1;Ontology_term=GO:0006281,GO:0019104,GO:0032993;gbkey=CDS;go_component=protein-DNA complex|0032993||IEA;go_function=DNA N-glycosylase activity|0019104||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211145.1;locus_tag=AD853_RS02740;product=DNA-3-methyladenine glycosylase family protein;protein_id=WP_038823784.1;transl_table=11 NZ_CPUY01000002.1 RefSeq pseudogene 152228 155184 . - . ID=gene-AD853_RS22420;Name=AD853_RS22420;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD853_RS22420;pseudo=true NZ_CPUY01000002.1 Protein Homology CDS 152228 155184 . - 0 ID=cds-AD853_RS22420;Parent=gene-AD853_RS22420;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019080836.1;locus_tag=AD853_RS22420;product=HD domain-containing phosphohydrolase;pseudo=true;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 155538 156413 . - . ID=gene-AD853_RS02755;Name=AD853_RS02755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS02755;old_locus_tag=ERS008462_00556 NZ_CPUY01000002.1 Protein Homology CDS 155538 156413 . - 0 ID=cds-WP_002211147.1;Parent=gene-AD853_RS02755;Dbxref=GenBank:WP_002211147.1;Name=WP_002211147.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211147.1;locus_tag=AD853_RS02755;product=helix-turn-helix transcriptional regulator;protein_id=WP_002211147.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 156714 157076 . - . ID=gene-AD853_RS02765;Name=fliT;gbkey=Gene;gene=fliT;gene_biotype=protein_coding;locus_tag=AD853_RS02765;old_locus_tag=ERS008462_00557 NZ_CPUY01000002.1 Protein Homology CDS 156714 157076 . - 0 ID=cds-WP_033852775.1;Parent=gene-AD853_RS02765;Dbxref=GenBank:WP_033852775.1;Name=WP_033852775.1;Ontology_term=GO:0006605,GO:0044780,GO:1902209;gbkey=CDS;gene=fliT;go_process=protein targeting|0006605||IEA,bacterial-type flagellum assembly|0044780||IEA,negative regulation of bacterial-type flagellum assembly|1902209||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011816593.1;locus_tag=AD853_RS02765;product=flagella biosynthesis regulatory protein FliT;protein_id=WP_033852775.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 157087 157485 . - . ID=gene-AD853_RS02770;Name=fliS;gbkey=Gene;gene=fliS;gene_biotype=protein_coding;locus_tag=AD853_RS02770;old_locus_tag=ERS008462_00558 NZ_CPUY01000002.1 Protein Homology CDS 157087 157485 . - 0 ID=cds-WP_011192186.1;Parent=gene-AD853_RS02770;Dbxref=GenBank:WP_011192186.1;Name=WP_011192186.1;Ontology_term=GO:0044780;gbkey=CDS;gene=fliS;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211149.1;locus_tag=AD853_RS02770;product=flagellar export chaperone FliS;protein_id=WP_011192186.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 157496 158896 . - . ID=gene-AD853_RS02775;Name=fliD;gbkey=Gene;gene=fliD;gene_biotype=protein_coding;locus_tag=AD853_RS02775;old_locus_tag=ERS008462_00559 NZ_CPUY01000002.1 Protein Homology CDS 157496 158896 . - 0 ID=cds-WP_038823788.1;Parent=gene-AD853_RS02775;Dbxref=GenBank:WP_038823788.1;Name=WP_038823788.1;Ontology_term=GO:0007155,GO:0009288,GO:0009421;gbkey=CDS;gene=fliD;go_component=bacterial-type flagellum|0009288||IEA,bacterial-type flagellum filament cap|0009421||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211150.1;locus_tag=AD853_RS02775;product=flagellar filament capping protein FliD;protein_id=WP_038823788.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 159193 160302 . + . ID=gene-AD853_RS02780;Name=AD853_RS02780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS02780;old_locus_tag=ERS008462_00560 NZ_CPUY01000002.1 Protein Homology CDS 159193 160302 . + 0 ID=cds-WP_002211152.1;Parent=gene-AD853_RS02780;Dbxref=GenBank:WP_002211152.1;Name=WP_002211152.1;Ontology_term=GO:0005198;gbkey=CDS;go_function=structural molecule activity|0005198||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002231111.1;locus_tag=AD853_RS02780;product=FliC/FljB family flagellin;protein_id=WP_002211152.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 160649 161371 . + . ID=gene-AD853_RS02785;Name=AD853_RS02785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS02785;old_locus_tag=ERS008462_00561 NZ_CPUY01000002.1 Protein Homology CDS 160649 161371 . + 0 ID=cds-WP_011192188.1;Parent=gene-AD853_RS02785;Dbxref=GenBank:WP_011192188.1;Name=WP_011192188.1;Ontology_term=GO:0006352,GO:0006355,GO:0003677,GO:0003899,GO:0016987;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-directed RNA polymerase activity|0003899||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192188.1;locus_tag=AD853_RS02785;product=RNA polymerase sigma factor FliA;protein_id=WP_011192188.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 161605 162114 . + . ID=gene-AD853_RS02790;Name=fliZ;gbkey=Gene;gene=fliZ;gene_biotype=protein_coding;locus_tag=AD853_RS02790;old_locus_tag=ERS008462_00562 NZ_CPUY01000002.1 Protein Homology CDS 161605 162114 . + 0 ID=cds-WP_038823789.1;Parent=gene-AD853_RS02790;Dbxref=GenBank:WP_038823789.1;Name=WP_038823789.1;gbkey=CDS;gene=fliZ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211154.1;locus_tag=AD853_RS02790;product=flagella biosynthesis regulatory protein FliZ;protein_id=WP_038823789.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 162402 163394 . + . ID=gene-AD853_RS02795;Name=AD853_RS02795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS02795;old_locus_tag=ERS008462_00563 NZ_CPUY01000002.1 Protein Homology CDS 162402 163394 . + 0 ID=cds-WP_011192189.1;Parent=gene-AD853_RS02795;Dbxref=GenBank:WP_011192189.1;Name=WP_011192189.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013649714.1;locus_tag=AD853_RS02795;product=D-cysteine desulfhydrase;protein_id=WP_011192189.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 163518 164318 . + . ID=gene-AD853_RS02800;Name=tcyJ;gbkey=Gene;gene=tcyJ;gene_biotype=protein_coding;locus_tag=AD853_RS02800;old_locus_tag=ERS008462_00564 NZ_CPUY01000002.1 Protein Homology CDS 163518 164318 . + 0 ID=cds-WP_002211157.1;Parent=gene-AD853_RS02800;Dbxref=GenBank:WP_002211157.1;Name=WP_002211157.1;Ontology_term=GO:0015276,GO:0016020;gbkey=CDS;gene=tcyJ;go_component=membrane|0016020||IEA;go_function=ligand-gated monoatomic ion channel activity|0015276||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211157.1;locus_tag=AD853_RS02800;product=cystine ABC transporter substrate-binding protein;protein_id=WP_002211157.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 164318 164980 . + . ID=gene-AD853_RS02805;Name=tcyL;gbkey=Gene;gene=tcyL;gene_biotype=protein_coding;locus_tag=AD853_RS02805;old_locus_tag=ERS008462_00565 NZ_CPUY01000002.1 Protein Homology CDS 164318 164980 . + 0 ID=cds-WP_038823790.1;Parent=gene-AD853_RS02805;Dbxref=GenBank:WP_038823790.1;Name=WP_038823790.1;gbkey=CDS;gene=tcyL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304211.1;locus_tag=AD853_RS02805;product=cystine ABC transporter permease;protein_id=WP_038823790.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 164983 165744 . + . ID=gene-AD853_RS02810;Name=tcyN;gbkey=Gene;gene=tcyN;gene_biotype=protein_coding;locus_tag=AD853_RS02810;old_locus_tag=ERS008462_00566 NZ_CPUY01000002.1 Protein Homology CDS 164983 165744 . + 0 ID=cds-WP_002211159.1;Parent=gene-AD853_RS02810;Dbxref=GenBank:WP_002211159.1;Name=WP_002211159.1;Ontology_term=GO:0003333,GO:0005524,GO:0015424;gbkey=CDS;gene=tcyN;go_function=ATP binding|0005524||IEA,ABC-type amino acid transporter activity|0015424||IEA;go_process=amino acid transmembrane transport|0003333||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013060329.1;locus_tag=AD853_RS02810;product=L-cystine ABC transporter ATP-binding protein TcyN;protein_id=WP_002211159.1;transl_table=11 NZ_CPUY01000002.1 RefSeq pseudogene 165830 165898 . + . ID=gene-AD853_RS21980;Name=AD853_RS21980;end_range=165898,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD853_RS21980;partial=true;pseudo=true NZ_CPUY01000002.1 Protein Homology CDS 165830 165898 . + 0 ID=cds-AD853_RS21980;Parent=gene-AD853_RS21980;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=165898,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002378124.1;locus_tag=AD853_RS21980;partial=true;product=gluconate 5-dehydrogenase;pseudo=true;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 166036 166407 . - . ID=gene-AD853_RS02815;Name=AD853_RS02815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS02815;old_locus_tag=ERS008462_00567 NZ_CPUY01000002.1 Protein Homology CDS 166036 166407 . - 0 ID=cds-WP_002223875.1;Parent=gene-AD853_RS02815;Dbxref=GenBank:WP_002223875.1;Name=WP_002223875.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002223875.1;locus_tag=AD853_RS02815;product=HVO_A0114 family putative DNA-binding protein;protein_id=WP_002223875.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 166407 166742 . - . ID=gene-AD853_RS02820;Name=AD853_RS02820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS02820;old_locus_tag=ERS008462_00568 NZ_CPUY01000002.1 Protein Homology CDS 166407 166742 . - 0 ID=cds-WP_072080744.1;Parent=gene-AD853_RS02820;Dbxref=GenBank:WP_072080744.1;Name=WP_072080744.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002216049.1;locus_tag=AD853_RS02820;product=toxin-antitoxin system TumE family protein;protein_id=WP_072080744.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 167238 171209 . - . ID=gene-AD853_RS02825;Name=putA;gbkey=Gene;gene=putA;gene_biotype=protein_coding;locus_tag=AD853_RS02825;old_locus_tag=ERS008462_00569 NZ_CPUY01000002.1 Protein Homology CDS 167238 171209 . - 0 ID=cds-WP_038824625.1;Parent=gene-AD853_RS02825;Dbxref=GenBank:WP_038824625.1;Name=WP_038824625.1;Ontology_term=GO:0006355,GO:0055129,GO:0003700,GO:0003842,GO:0004657,GO:0016620;gbkey=CDS;gene=putA;go_function=DNA-binding transcription factor activity|0003700||IEA,L-glutamate gamma-semialdehyde dehydrogenase activity|0003842||IEA,proline dehydrogenase activity|0004657||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,L-proline biosynthetic process|0055129||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211162.1;locus_tag=AD853_RS02825;product=trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase;protein_id=WP_038824625.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 171554 171751 . + . ID=gene-AD853_RS02830;Name=AD853_RS02830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS02830;old_locus_tag=ERS008462_00570 NZ_CPUY01000002.1 Protein Homology CDS 171554 171751 . + 0 ID=cds-WP_002211163.1;Parent=gene-AD853_RS02830;Dbxref=GenBank:WP_002211163.1;Name=WP_002211163.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211163.1;locus_tag=AD853_RS02830;product=hypothetical protein;protein_id=WP_002211163.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 171781 173265 . + . ID=gene-AD853_RS02835;Name=putP;gbkey=Gene;gene=putP;gene_biotype=protein_coding;locus_tag=AD853_RS02835;old_locus_tag=ERS008462_00571 NZ_CPUY01000002.1 Protein Homology CDS 171781 173265 . + 0 ID=cds-WP_002211164.1;Parent=gene-AD853_RS02835;Dbxref=GenBank:WP_002211164.1;Name=WP_002211164.1;Ontology_term=GO:0006814,GO:0015824,GO:0055085,GO:0005298,GO:0031402,GO:0016020;gbkey=CDS;gene=putP;go_component=membrane|0016020||IEA;go_function=proline:sodium symporter activity|0005298||IEA,sodium ion binding|0031402||IEA;go_process=sodium ion transport|0006814||IEA,proline transport|0015824||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004392689.1;locus_tag=AD853_RS02835;product=sodium/proline symporter PutP;protein_id=WP_002211164.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 173598 174446 . + . ID=gene-AD853_RS02840;Name=efeU;gbkey=Gene;gene=efeU;gene_biotype=protein_coding;locus_tag=AD853_RS02840;old_locus_tag=ERS008462_00572 NZ_CPUY01000002.1 Protein Homology CDS 173598 174446 . + 0 ID=cds-WP_002211165.1;Parent=gene-AD853_RS02840;Dbxref=GenBank:WP_002211165.1;Name=WP_002211165.1;Ontology_term=GO:0034755,GO:0005381,GO:0033573;gbkey=CDS;gene=efeU;go_component=high-affinity iron permease complex|0033573||IEA;go_function=iron ion transmembrane transporter activity|0005381||IEA;go_process=iron ion transmembrane transport|0034755||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105266.1;locus_tag=AD853_RS02840;product=iron uptake transporter permease EfeU;protein_id=WP_002211165.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 174476 175606 . + . ID=gene-AD853_RS02845;Name=efeO;gbkey=Gene;gene=efeO;gene_biotype=protein_coding;locus_tag=AD853_RS02845;old_locus_tag=ERS008462_00573 NZ_CPUY01000002.1 Protein Homology CDS 174476 175606 . + 0 ID=cds-WP_002211166.1;Parent=gene-AD853_RS02845;Dbxref=GenBank:WP_002211166.1;Name=WP_002211166.1;Ontology_term=GO:0006826;gbkey=CDS;gene=efeO;go_process=iron ion transport|0006826||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211166.1;locus_tag=AD853_RS02845;product=iron uptake system protein EfeO;protein_id=WP_002211166.1;transl_table=11 NZ_CPUY01000002.1 RefSeq pseudogene 175617 176921 . + . ID=gene-AD853_RS02850;Name=efeB;gbkey=Gene;gene=efeB;gene_biotype=pseudogene;locus_tag=AD853_RS02850;pseudo=true NZ_CPUY01000002.1 Protein Homology CDS 175617 176921 . + 0 ID=cds-AD853_RS02850;Parent=gene-AD853_RS02850;Note=internal stop;Ontology_term=GO:0033212,GO:0004601,GO:0020037;gbkey=CDS;gene=efeB;go_function=peroxidase activity|0004601||IEA,heme binding|0020037||IEA;go_process=iron import into cell|0033212||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211167.1;locus_tag=AD853_RS02850;product=iron uptake transporter deferrochelatase/peroxidase subunit;pseudo=true;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 177034 177633 . - . ID=gene-AD853_RS02855;Name=wrbA;gbkey=Gene;gene=wrbA;gene_biotype=protein_coding;locus_tag=AD853_RS02855;old_locus_tag=ERS008462_00576 NZ_CPUY01000002.1 Protein Homology CDS 177034 177633 . - 0 ID=cds-WP_038824856.1;Parent=gene-AD853_RS02855;Dbxref=GenBank:WP_038824856.1;Name=WP_038824856.1;Ontology_term=GO:0003955,GO:0010181;gbkey=CDS;gene=wrbA;go_function=NAD(P)H dehydrogenase (quinone) activity|0003955||IEA,FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211168.1;locus_tag=AD853_RS02855;product=NAD(P)H:quinone oxidoreductase;protein_id=WP_038824856.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 178028 179206 . + . ID=gene-AD853_RS02860;Name=AD853_RS02860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS02860;old_locus_tag=ERS008462_00577 NZ_CPUY01000002.1 Protein Homology CDS 178028 179206 . + 0 ID=cds-WP_038824857.1;Parent=gene-AD853_RS02860;Dbxref=GenBank:WP_038824857.1;Name=WP_038824857.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016261797.1;locus_tag=AD853_RS02860;product=N-acetylneuraminate epimerase;protein_id=WP_038824857.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 179332 180747 . - . ID=gene-AD853_RS02865;Name=cycA;gbkey=Gene;gene=cycA;gene_biotype=protein_coding;gene_synonym=dagA;locus_tag=AD853_RS02865;old_locus_tag=ERS008462_00578 NZ_CPUY01000002.1 Protein Homology CDS 179332 180747 . - 0 ID=cds-WP_012105264.1;Parent=gene-AD853_RS02865;Dbxref=GenBank:WP_012105264.1;Name=WP_012105264.1;Ontology_term=GO:0006865,GO:0055085,GO:0016020;gbkey=CDS;gene=cycA;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211170.1;locus_tag=AD853_RS02865;product=D-serine/D-alanine/glycine transporter;protein_id=WP_012105264.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 181109 181184 . + . ID=gene-AD853_RS02870;Name=AD853_RS02870;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD853_RS02870;old_locus_tag=ERS008462_00579 NZ_CPUY01000002.1 tRNAscan-SE tRNA 181109 181184 . + . ID=rna-AD853_RS02870;Parent=gene-AD853_RS02870;anticodon=(pos:181142..181144);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD853_RS02870;product=tRNA-Lys NZ_CPUY01000002.1 tRNAscan-SE exon 181109 181184 . + . ID=exon-AD853_RS02870-1;Parent=rna-AD853_RS02870;anticodon=(pos:181142..181144);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD853_RS02870;product=tRNA-Lys NZ_CPUY01000002.1 RefSeq gene 181871 182422 . + . ID=gene-AD853_RS02875;Name=AD853_RS02875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS02875;old_locus_tag=ERS008462_00580 NZ_CPUY01000002.1 Protein Homology CDS 181871 182422 . + 0 ID=cds-WP_011192196.1;Parent=gene-AD853_RS02875;Dbxref=GenBank:WP_011192196.1;Name=WP_011192196.1;Ontology_term=GO:0044384;gbkey=CDS;go_component=host outer membrane|0044384||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211172.1;locus_tag=AD853_RS02875;product=Ail/Lom family outer membrane beta-barrel protein;protein_id=WP_011192196.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 182762 183016 . + . ID=gene-AD853_RS02880;Name=AD853_RS02880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS02880;old_locus_tag=ERS008462_00581 NZ_CPUY01000002.1 Protein Homology CDS 182762 183016 . + 0 ID=cds-WP_002211173.1;Parent=gene-AD853_RS02880;Dbxref=GenBank:WP_002211173.1;Name=WP_002211173.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211173.1;locus_tag=AD853_RS02880;product=hypothetical protein;protein_id=WP_002211173.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 183044 183385 . - . ID=gene-AD853_RS02885;Name=AD853_RS02885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS02885;old_locus_tag=ERS008462_00582 NZ_CPUY01000002.1 Protein Homology CDS 183044 183385 . - 0 ID=cds-WP_002218408.1;Parent=gene-AD853_RS02885;Dbxref=GenBank:WP_002218408.1;Name=WP_002218408.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002218408.1;locus_tag=AD853_RS02885;product=GlpM family protein;protein_id=WP_002218408.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 183513 183737 . - . ID=gene-AD853_RS02890;Name=AD853_RS02890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS02890;old_locus_tag=ERS008462_00583 NZ_CPUY01000002.1 Protein Homology CDS 183513 183737 . - 0 ID=cds-WP_002211175.1;Parent=gene-AD853_RS02890;Dbxref=GenBank:WP_002211175.1;Name=WP_002211175.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005127733.1;locus_tag=AD853_RS02890;product=DUF2594 family protein;protein_id=WP_002211175.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 184400 185056 . + . ID=gene-AD853_RS02895;Name=uvrY;gbkey=Gene;gene=uvrY;gene_biotype=protein_coding;locus_tag=AD853_RS02895;old_locus_tag=ERS008462_00584 NZ_CPUY01000002.1 Protein Homology CDS 184400 185056 . + 0 ID=cds-WP_002211176.1;Parent=gene-AD853_RS02895;Dbxref=GenBank:WP_002211176.1;Name=WP_002211176.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=uvrY;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008813142.1;locus_tag=AD853_RS02895;product=UvrY/SirA/GacA family response regulator transcription factor;protein_id=WP_002211176.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 185049 186881 . + . ID=gene-AD853_RS02900;Name=uvrC;gbkey=Gene;gene=uvrC;gene_biotype=protein_coding;locus_tag=AD853_RS02900;old_locus_tag=ERS008462_00585 NZ_CPUY01000002.1 Protein Homology CDS 185049 186881 . + 0 ID=cds-WP_002220477.1;Parent=gene-AD853_RS02900;Dbxref=GenBank:WP_002220477.1;Name=WP_002220477.1;Ontology_term=GO:0006289,GO:0009381,GO:0009380;gbkey=CDS;gene=uvrC;go_component=excinuclease repair complex|0009380||IEA;go_function=excinuclease ABC activity|0009381||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310678.2;locus_tag=AD853_RS02900;product=excinuclease ABC subunit UvrC;protein_id=WP_002220477.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 186940 187488 . + . ID=gene-AD853_RS02905;Name=pgsA;gbkey=Gene;gene=pgsA;gene_biotype=protein_coding;locus_tag=AD853_RS02905;old_locus_tag=ERS008462_00586 NZ_CPUY01000002.1 Protein Homology CDS 186940 187488 . + 0 ID=cds-WP_002220475.1;Parent=gene-AD853_RS02905;Dbxref=GenBank:WP_002220475.1;Name=WP_002220475.1;gbkey=CDS;gene=pgsA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019080796.1;locus_tag=AD853_RS02905;product=CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase;protein_id=WP_002220475.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 187633 187708 . + . ID=gene-AD853_RS02910;Name=AD853_RS02910;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD853_RS02910;old_locus_tag=ERS008462_00587 NZ_CPUY01000002.1 tRNAscan-SE tRNA 187633 187708 . + . ID=rna-AD853_RS02910;Parent=gene-AD853_RS02910;anticodon=(pos:187666..187668);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD853_RS02910;product=tRNA-Gly NZ_CPUY01000002.1 tRNAscan-SE exon 187633 187708 . + . ID=exon-AD853_RS02910-1;Parent=rna-AD853_RS02910;anticodon=(pos:187666..187668);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD853_RS02910;product=tRNA-Gly NZ_CPUY01000002.1 RefSeq gene 187761 187834 . + . ID=gene-AD853_RS02915;Name=AD853_RS02915;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD853_RS02915;old_locus_tag=ERS008462_00588 NZ_CPUY01000002.1 tRNAscan-SE tRNA 187761 187834 . + . ID=rna-AD853_RS02915;Parent=gene-AD853_RS02915;anticodon=(pos:187793..187795);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD853_RS02915;product=tRNA-Cys NZ_CPUY01000002.1 tRNAscan-SE exon 187761 187834 . + . ID=exon-AD853_RS02915-1;Parent=rna-AD853_RS02915;anticodon=(pos:187793..187795);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD853_RS02915;product=tRNA-Cys NZ_CPUY01000002.1 RefSeq gene 187845 187930 . + . ID=gene-AD853_RS02920;Name=AD853_RS02920;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD853_RS02920;old_locus_tag=ERS008462_00589 NZ_CPUY01000002.1 tRNAscan-SE tRNA 187845 187930 . + . ID=rna-AD853_RS02920;Parent=gene-AD853_RS02920;anticodon=(pos:187879..187881);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD853_RS02920;product=tRNA-Leu NZ_CPUY01000002.1 tRNAscan-SE exon 187845 187930 . + . ID=exon-AD853_RS02920-1;Parent=rna-AD853_RS02920;anticodon=(pos:187879..187881);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD853_RS02920;product=tRNA-Leu NZ_CPUY01000002.1 RefSeq gene 188071 188295 . - . ID=gene-AD853_RS20190;Name=AD853_RS20190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS20190 NZ_CPUY01000002.1 Protein Homology CDS 188071 188295 . - 0 ID=cds-WP_002215398.1;Parent=gene-AD853_RS20190;Dbxref=GenBank:WP_002215398.1;Name=WP_002215398.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012413690.1;locus_tag=AD853_RS20190;product=site-specific integrase;protein_id=WP_002215398.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 188854 189081 . + . ID=gene-AD853_RS02930;Name=AD853_RS02930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS02930 NZ_CPUY01000002.1 Protein Homology CDS 188854 189081 . + 0 ID=cds-WP_002215401.1;Parent=gene-AD853_RS02930;Dbxref=GenBank:WP_002215401.1;Name=WP_002215401.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002215401.1;locus_tag=AD853_RS02930;product=DnaB-like helicase C-terminal domain-containing protein;protein_id=WP_002215401.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 189842 190015 . + . ID=gene-AD853_RS20195;Name=AD853_RS20195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS20195;old_locus_tag=ERS008462_00593 NZ_CPUY01000002.1 Protein Homology CDS 189842 190015 . + 0 ID=cds-WP_002213226.1;Parent=gene-AD853_RS20195;Dbxref=GenBank:WP_002213226.1;Name=WP_002213226.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002213226.1;locus_tag=AD853_RS20195;product=hypothetical protein;protein_id=WP_002213226.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 190208 190390 . + . ID=gene-AD853_RS02940;Name=AD853_RS02940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS02940;old_locus_tag=ERS008462_00594 NZ_CPUY01000002.1 Protein Homology CDS 190208 190390 . + 0 ID=cds-WP_038825359.1;Parent=gene-AD853_RS02940;Dbxref=GenBank:WP_038825359.1;Name=WP_038825359.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002213223.1;locus_tag=AD853_RS02940;product=hypothetical protein;protein_id=WP_038825359.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 190659 190952 . - . ID=gene-AD853_RS02950;Name=tssD;gbkey=Gene;gene=tssD;gene_biotype=protein_coding;locus_tag=AD853_RS02950;old_locus_tag=ERS008462_00595 NZ_CPUY01000002.1 Protein Homology CDS 190659 190952 . - 0 ID=cds-WP_050124564.1;Parent=gene-AD853_RS02950;Dbxref=GenBank:WP_050124564.1;Name=WP_050124564.1;gbkey=CDS;gene=tssD;inference=COORDINATES: protein motif:HMM:TIGR03344.1;locus_tag=AD853_RS02950;product=type VI secretion system tube protein TssD;protein_id=WP_050124564.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 191172 192685 . - . ID=gene-AD853_RS21260;Name=AD853_RS21260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS21260 NZ_CPUY01000002.1 Protein Homology CDS 192232 192685 . - 0 ID=cds-WP_086026483.1;Parent=gene-AD853_RS21260;Dbxref=GenBank:WP_086026483.1;Name=WP_086026483.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611450.1;locus_tag=AD853_RS21260;product=IS3 family transposase;protein_id=WP_086026483.1;transl_table=11 NZ_CPUY01000002.1 Protein Homology CDS 191172 192232 . - 2 ID=cds-WP_086026483.1;Parent=gene-AD853_RS21260;Dbxref=GenBank:WP_086026483.1;Name=WP_086026483.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611450.1;locus_tag=AD853_RS21260;product=IS3 family transposase;protein_id=WP_086026483.1;transl_table=11 NZ_CPUY01000002.1 RefSeq pseudogene 192751 192873 . - . ID=gene-AD853_RS02965;Name=AD853_RS02965;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD853_RS02965;old_locus_tag=ERS008462_00598;partial=true;pseudo=true;start_range=.,192751 NZ_CPUY01000002.1 Protein Homology CDS 192751 192873 . - 0 ID=cds-AD853_RS02965;Parent=gene-AD853_RS02965;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010835450.1;locus_tag=AD853_RS02965;partial=true;product=phage tail protein;pseudo=true;start_range=.,192751;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 193019 193297 . - . ID=gene-AD853_RS22425;Name=AD853_RS22425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS22425;old_locus_tag=ERS008462_00599 NZ_CPUY01000002.1 Protein Homology CDS 193019 193297 . - 0 ID=cds-WP_012413700.1;Parent=gene-AD853_RS22425;Dbxref=GenBank:WP_012413700.1;Name=WP_012413700.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012413700.1;locus_tag=AD853_RS22425;product=hypothetical protein;protein_id=WP_012413700.1;transl_table=11 NZ_CPUY01000002.1 RefSeq pseudogene 193278 193795 . - . ID=gene-AD853_RS02975;Name=AD853_RS02975;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD853_RS02975;old_locus_tag=ERS008462_00600;pseudo=true NZ_CPUY01000002.1 Protein Homology CDS 193278 193795 . - 0 ID=cds-AD853_RS02975;Parent=gene-AD853_RS02975;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304161.1;locus_tag=AD853_RS02975;product=DUF2778 domain-containing protein;pseudo=true;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 194241 194471 . + . ID=gene-AD853_RS21725;Name=AD853_RS21725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS21725;old_locus_tag=ERS008462_00603 NZ_CPUY01000002.1 Protein Homology CDS 194241 194471 . + 0 ID=cds-WP_038824771.1;Parent=gene-AD853_RS21725;Dbxref=GenBank:WP_038824771.1;Name=WP_038824771.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304192.1;locus_tag=AD853_RS21725;product=hypothetical protein;protein_id=WP_038824771.1;transl_table=11 NZ_CPUY01000002.1 RefSeq pseudogene 194490 194639 . - . ID=gene-AD853_RS22430;Name=AD853_RS22430;end_range=194639,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD853_RS22430;partial=true;pseudo=true NZ_CPUY01000002.1 Protein Homology CDS 194490 194639 . - 0 ID=cds-AD853_RS22430;Parent=gene-AD853_RS22430;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=194639,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012413676.1;locus_tag=AD853_RS22430;partial=true;product=phage virion morphogenesis family protein;pseudo=true;transl_table=11 NZ_CPUY01000002.1 RefSeq pseudogene 194619 194997 . + . ID=gene-AD853_RS02995;Name=AD853_RS02995;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD853_RS02995;pseudo=true NZ_CPUY01000002.1 Protein Homology CDS 194619 194997 . + 0 ID=cds-AD853_RS02995;Parent=gene-AD853_RS02995;Note=frameshifted;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_241939927.1;locus_tag=AD853_RS02995;product=IS1 family transposase;pseudo=true;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 195082 195192 . + . ID=gene-AD853_RS22575;Name=AD853_RS22575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS22575 NZ_CPUY01000002.1 Protein Homology CDS 195082 195192 . + 0 ID=cds-WP_230674866.1;Parent=gene-AD853_RS22575;Dbxref=GenBank:WP_230674866.1;Name=WP_230674866.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014467.6;locus_tag=AD853_RS22575;product=tail fiber assembly protein;protein_id=WP_230674866.1;transl_table=11 NZ_CPUY01000002.1 RefSeq pseudogene 195268 195549 . - . ID=gene-AD853_RS03000;Name=AD853_RS03000;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD853_RS03000;old_locus_tag=ERS008462_00605;partial=true;pseudo=true;start_range=.,195268 NZ_CPUY01000002.1 Protein Homology CDS 195268 195549 . - 0 ID=cds-AD853_RS03000;Parent=gene-AD853_RS03000;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019023.6;locus_tag=AD853_RS03000;partial=true;product=DUF1493 family protein;pseudo=true;start_range=.,195268;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 195534 196004 . - . ID=gene-AD853_RS03005;Name=AD853_RS03005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS03005;old_locus_tag=ERS008462_00606 NZ_CPUY01000002.1 Protein Homology CDS 195534 196004 . - 0 ID=cds-WP_038824768.1;Parent=gene-AD853_RS03005;Dbxref=GenBank:WP_038824768.1;Name=WP_038824768.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_042546112.1;locus_tag=AD853_RS03005;product=STM2901 family protein;protein_id=WP_038824768.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 196118 196282 . - . ID=gene-AD853_RS22580;Name=AD853_RS22580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS22580 NZ_CPUY01000002.1 Protein Homology CDS 196118 196282 . - 0 ID=cds-WP_080619219.1;Parent=gene-AD853_RS22580;Dbxref=GenBank:WP_080619219.1;Name=WP_080619219.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025304.6;locus_tag=AD853_RS22580;product=helix-turn-helix domain-containing protein;protein_id=WP_080619219.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 196237 196806 . - . ID=gene-AD853_RS03010;Name=AD853_RS03010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS03010;old_locus_tag=ERS008462_00607 NZ_CPUY01000002.1 Protein Homology CDS 196237 196806 . - 0 ID=cds-WP_002213205.1;Parent=gene-AD853_RS03010;Dbxref=GenBank:WP_002213205.1;Name=WP_002213205.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304155.1;locus_tag=AD853_RS03010;product=hypothetical protein;protein_id=WP_002213205.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 196818 197252 . - . ID=gene-AD853_RS03015;Name=AD853_RS03015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS03015;old_locus_tag=ERS008462_00608 NZ_CPUY01000002.1 Protein Homology CDS 196818 197252 . - 0 ID=cds-WP_002215417.1;Parent=gene-AD853_RS03015;Dbxref=GenBank:WP_002215417.1;Name=WP_002215417.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002215417.1;locus_tag=AD853_RS03015;product=hypothetical protein;protein_id=WP_002215417.1;transl_table=11 NZ_CPUY01000002.1 RefSeq pseudogene 197550 197876 . + . ID=gene-AD853_RS20215;Name=AD853_RS20215;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD853_RS20215;partial=true;pseudo=true;start_range=.,197550 NZ_CPUY01000002.1 Protein Homology CDS 197550 197876 . + 0 ID=cds-AD853_RS20215;Parent=gene-AD853_RS20215;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0015074;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611482.1;locus_tag=AD853_RS20215;partial=true;product=integrase core domain-containing protein;pseudo=true;start_range=.,197550;transl_table=11 NZ_CPUY01000002.1 RefSeq pseudogene 197930 198129 . + . ID=gene-AD853_RS21995;Name=AD853_RS21995;end_range=198129,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD853_RS21995;partial=true;pseudo=true NZ_CPUY01000002.1 Protein Homology CDS 197930 198129 . + 0 ID=cds-AD853_RS21995;Parent=gene-AD853_RS21995;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=198129,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558178.1;locus_tag=AD853_RS21995;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 198221 199018 . + . ID=gene-AD853_RS03025;Name=AD853_RS03025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS03025;old_locus_tag=ERS008462_00611 NZ_CPUY01000002.1 Protein Homology CDS 198221 199018 . + 0 ID=cds-WP_002213201.1;Parent=gene-AD853_RS03025;Dbxref=GenBank:WP_002213201.1;Name=WP_002213201.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002213201.1;locus_tag=AD853_RS03025;product=GntR family transcriptional regulator;protein_id=WP_002213201.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 199680 200693 . + . ID=gene-AD853_RS03035;Name=AD853_RS03035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS03035;old_locus_tag=ERS008462_00612 NZ_CPUY01000002.1 Protein Homology CDS 199680 200693 . + 0 ID=cds-WP_038823990.1;Parent=gene-AD853_RS03035;Dbxref=GenBank:WP_038823990.1;Name=WP_038823990.1;Ontology_term=GO:0000166,GO:0003824;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002213192.1;locus_tag=AD853_RS03035;product=Gfo/Idh/MocA family protein;protein_id=WP_038823990.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 200723 201991 . + . ID=gene-AD853_RS03040;Name=AD853_RS03040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS03040;old_locus_tag=ERS008462_00613 NZ_CPUY01000002.1 Protein Homology CDS 200723 201991 . + 0 ID=cds-WP_038823992.1;Parent=gene-AD853_RS03040;Dbxref=GenBank:WP_038823992.1;Name=WP_038823992.1;Ontology_term=GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105195.1;locus_tag=AD853_RS03040;product=ABC transporter substrate-binding protein;protein_id=WP_038823992.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 202058 202918 . + . ID=gene-AD853_RS03045;Name=AD853_RS03045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS03045;old_locus_tag=ERS008462_00614 NZ_CPUY01000002.1 Protein Homology CDS 202058 202918 . + 0 ID=cds-WP_002213188.1;Parent=gene-AD853_RS03045;Dbxref=GenBank:WP_002213188.1;Name=WP_002213188.1;Ontology_term=GO:0008643,GO:0055085,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012229553.1;locus_tag=AD853_RS03045;product=carbohydrate ABC transporter permease;protein_id=WP_002213188.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 202911 203738 . + . ID=gene-AD853_RS03050;Name=AD853_RS03050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS03050;old_locus_tag=ERS008462_00615 NZ_CPUY01000002.1 Protein Homology CDS 202911 203738 . + 0 ID=cds-WP_002213186.1;Parent=gene-AD853_RS03050;Dbxref=GenBank:WP_002213186.1;Name=WP_002213186.1;Ontology_term=GO:0008643,GO:0055085;gbkey=CDS;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002213186.1;locus_tag=AD853_RS03050;product=carbohydrate ABC transporter permease;protein_id=WP_002213186.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 203763 204905 . + . ID=gene-AD853_RS03055;Name=AD853_RS03055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS03055;old_locus_tag=ERS008462_00616 NZ_CPUY01000002.1 Protein Homology CDS 203763 204905 . + 0 ID=cds-WP_011192353.1;Parent=gene-AD853_RS03055;Dbxref=GenBank:WP_011192353.1;Name=WP_011192353.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105192.1;locus_tag=AD853_RS03055;product=ABC transporter ATP-binding protein;protein_id=WP_011192353.1;transl_table=11 NZ_CPUY01000002.1 RefSeq pseudogene 204915 205150 . - . ID=gene-AD853_RS03060;Name=AD853_RS03060;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD853_RS03060;pseudo=true NZ_CPUY01000002.1 Protein Homology CDS 204915 205150 . - 0 ID=cds-AD853_RS03060;Parent=gene-AD853_RS03060;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002213183.1;locus_tag=AD853_RS03060;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 205210 205285 . - . ID=gene-AD853_RS03065;Name=AD853_RS03065;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD853_RS03065;old_locus_tag=ERS008462_00617 NZ_CPUY01000002.1 tRNAscan-SE tRNA 205210 205285 . - . ID=rna-AD853_RS03065;Parent=gene-AD853_RS03065;anticodon=(pos:complement(205250..205252));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD853_RS03065;product=tRNA-Asn NZ_CPUY01000002.1 tRNAscan-SE exon 205210 205285 . - . ID=exon-AD853_RS03065-1;Parent=rna-AD853_RS03065;anticodon=(pos:complement(205250..205252));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD853_RS03065;product=tRNA-Asn NZ_CPUY01000002.1 RefSeq gene 205593 206333 . - . ID=gene-AD853_RS03070;Name=AD853_RS03070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS03070;old_locus_tag=ERS008462_00618 NZ_CPUY01000002.1 Protein Homology CDS 205593 206333 . - 0 ID=cds-WP_038823684.1;Parent=gene-AD853_RS03070;Dbxref=GenBank:WP_038823684.1;Name=WP_038823684.1;Ontology_term=GO:0006457,GO:0043711,GO:0030288;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_process=protein folding|0006457||IEA,pilus organization|0043711||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002227954.1;locus_tag=AD853_RS03070;product=fimbrial biogenesis chaperone;protein_id=WP_038823684.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 206330 207607 . - . ID=gene-AD853_RS03075;Name=AD853_RS03075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS03075;old_locus_tag=ERS008462_00619 NZ_CPUY01000002.1 Protein Homology CDS 206330 207607 . - 0 ID=cds-WP_002221882.1;Parent=gene-AD853_RS03075;Dbxref=GenBank:WP_002221882.1;Name=WP_002221882.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002221882.1;locus_tag=AD853_RS03075;product=fimbrial protein;protein_id=WP_002221882.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 207695 210259 . - . ID=gene-AD853_RS03080;Name=AD853_RS03080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS03080;old_locus_tag=ERS008462_00620 NZ_CPUY01000002.1 Protein Homology CDS 207695 210259 . - 0 ID=cds-WP_038823686.1;Parent=gene-AD853_RS03080;Dbxref=GenBank:WP_038823686.1;Name=WP_038823686.1;Ontology_term=GO:0009297,GO:0015473,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=fimbrial usher porin activity|0015473||IEA;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002220437.1;locus_tag=AD853_RS03080;product=fimbria/pilus outer membrane usher protein;protein_id=WP_038823686.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 210335 211066 . - . ID=gene-AD853_RS03085;Name=AD853_RS03085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS03085;old_locus_tag=ERS008462_00621 NZ_CPUY01000002.1 Protein Homology CDS 210335 211066 . - 0 ID=cds-WP_012105190.1;Parent=gene-AD853_RS03085;Dbxref=GenBank:WP_012105190.1;Name=WP_012105190.1;Ontology_term=GO:0006457,GO:0043711,GO:0030288;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_process=protein folding|0006457||IEA,pilus organization|0043711||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212747.1;locus_tag=AD853_RS03085;product=fimbrial biogenesis chaperone;protein_id=WP_012105190.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 211159 211689 . - . ID=gene-AD853_RS03090;Name=AD853_RS03090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS03090;old_locus_tag=ERS008462_00622 NZ_CPUY01000002.1 Protein Homology CDS 211159 211689 . - 0 ID=cds-WP_038823689.1;Parent=gene-AD853_RS03090;Dbxref=GenBank:WP_038823689.1;Name=WP_038823689.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011906235.1;locus_tag=AD853_RS03090;product=fimbrial protein;protein_id=WP_038823689.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 212070 215882 . - . ID=gene-AD853_RS03095;Name=AD853_RS03095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS03095;old_locus_tag=ERS008462_00623 NZ_CPUY01000002.1 Protein Homology CDS 212070 215882 . - 0 ID=cds-WP_038823691.1;Parent=gene-AD853_RS03095;Dbxref=GenBank:WP_038823691.1;Name=WP_038823691.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016582653.1;locus_tag=AD853_RS03095;product=ATP-binding protein;protein_id=WP_038823691.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 216016 216648 . - . ID=gene-AD853_RS03100;Name=AD853_RS03100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS03100;old_locus_tag=ERS008462_00624 NZ_CPUY01000002.1 Protein Homology CDS 216016 216648 . - 0 ID=cds-WP_002212073.1;Parent=gene-AD853_RS03100;Dbxref=GenBank:WP_002212073.1;Name=WP_002212073.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002361775.1;locus_tag=AD853_RS03100;product=response regulator transcription factor;protein_id=WP_002212073.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 217474 218796 . - . ID=gene-AD853_RS03105;Name=ripA;gbkey=Gene;gene=ripA;gene_biotype=protein_coding;gene_synonym=ict;locus_tag=AD853_RS03105;old_locus_tag=ERS008462_00626 NZ_CPUY01000002.1 Protein Homology CDS 217474 218796 . - 0 ID=cds-WP_038823693.1;Parent=gene-AD853_RS03105;Dbxref=GenBank:WP_038823693.1;Name=WP_038823693.1;Note=Transfers CoA from succinate to itaconate;gbkey=CDS;gene=ripA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002230830.1;locus_tag=AD853_RS03105;product=itaconate CoA-transferase RipA/Ict;protein_id=WP_038823693.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 218819 219346 . - . ID=gene-AD853_RS03110;Name=ripB;gbkey=Gene;gene=ripB;gene_biotype=protein_coding;locus_tag=AD853_RS03110;old_locus_tag=ERS008462_00627 NZ_CPUY01000002.1 Protein Homology CDS 218819 219346 . - 0 ID=cds-WP_002212069.1;Parent=gene-AD853_RS03110;Dbxref=GenBank:WP_002212069.1;Name=WP_002212069.1;Note=Second step in itaconate degradation.;gbkey=CDS;gene=ripB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462034.1;locus_tag=AD853_RS03110;product=(R)-specific enoyl-CoA hydratase RipB/Ich;protein_id=WP_002212069.1;transl_table=11 NZ_CPUY01000002.1 RefSeq pseudogene 219411 220239 . - . ID=gene-AD853_RS03115;Name=ripC;gbkey=Gene;gene=ripC;gene_biotype=pseudogene;locus_tag=AD853_RS03115;old_locus_tag=ERS008462_00628;pseudo=true NZ_CPUY01000002.1 Protein Homology CDS 219411 220239 . - 0 ID=cds-AD853_RS03115;Parent=gene-AD853_RS03115;Note=Third step in itaconate degradation.%3B frameshifted;gbkey=CDS;gene=ripC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105185.1;locus_tag=AD853_RS03115;product=itaconate degradation C-C-lyase RipC;pseudo=true;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 220334 221212 . + . ID=gene-AD853_RS03120;Name=ripR;gbkey=Gene;gene=ripR;gene_biotype=protein_coding;locus_tag=AD853_RS03120;old_locus_tag=ERS008462_00630 NZ_CPUY01000002.1 Protein Homology CDS 220334 221212 . + 0 ID=cds-WP_012105184.1;Parent=gene-AD853_RS03120;Dbxref=GenBank:WP_012105184.1;Name=WP_012105184.1;gbkey=CDS;gene=ripR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212067.1;locus_tag=AD853_RS03120;product=itaconate degradation transcriptional regulator RipR;protein_id=WP_012105184.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 221287 221760 . - . ID=gene-AD853_RS03125;Name=AD853_RS03125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS03125;old_locus_tag=ERS008462_00631 NZ_CPUY01000002.1 Protein Homology CDS 221287 221760 . - 0 ID=cds-WP_002212066.1;Parent=gene-AD853_RS03125;Dbxref=GenBank:WP_002212066.1;Name=WP_002212066.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192359.1;locus_tag=AD853_RS03125;product=transthyretin-like family protein;protein_id=WP_002212066.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 221785 222345 . - . ID=gene-AD853_RS03130;Name=AD853_RS03130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS03130;old_locus_tag=ERS008462_00632 NZ_CPUY01000002.1 Protein Homology CDS 221785 222345 . - 0 ID=cds-WP_038823694.1;Parent=gene-AD853_RS03130;Dbxref=GenBank:WP_038823694.1;Name=WP_038823694.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192360.1;locus_tag=AD853_RS03130;product=hypothetical protein;protein_id=WP_038823694.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 222565 223794 . - . ID=gene-AD853_RS03135;Name=AD853_RS03135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS03135;old_locus_tag=ERS008462_00633 NZ_CPUY01000002.1 Protein Homology CDS 222565 223794 . - 0 ID=cds-WP_002212064.1;Parent=gene-AD853_RS03135;Dbxref=GenBank:WP_002212064.1;Name=WP_002212064.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105182.1;locus_tag=AD853_RS03135;product=MFS transporter;protein_id=WP_002212064.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 223860 224729 . - . ID=gene-AD853_RS03140;Name=AD853_RS03140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS03140;old_locus_tag=ERS008462_00634 NZ_CPUY01000002.1 Protein Homology CDS 223860 224729 . - 0 ID=cds-WP_011192361.1;Parent=gene-AD853_RS03140;Dbxref=GenBank:WP_011192361.1;Name=WP_011192361.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304148.1;locus_tag=AD853_RS03140;product=amidohydrolase family protein;protein_id=WP_011192361.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 224841 225803 . + . ID=gene-AD853_RS03145;Name=AD853_RS03145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS03145;old_locus_tag=ERS008462_00635 NZ_CPUY01000002.1 Protein Homology CDS 224841 225803 . + 0 ID=cds-WP_038823695.1;Parent=gene-AD853_RS03145;Dbxref=GenBank:WP_038823695.1;Name=WP_038823695.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212062.1;locus_tag=AD853_RS03145;product=LysR family transcriptional regulator;protein_id=WP_038823695.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 226108 226707 . - . ID=gene-AD853_RS03150;Name=nqrE;gbkey=Gene;gene=nqrE;gene_biotype=protein_coding;locus_tag=AD853_RS03150;old_locus_tag=ERS008462_00636 NZ_CPUY01000002.1 Protein Homology CDS 226108 226707 . - 0 ID=cds-WP_002212061.1;Parent=gene-AD853_RS03150;Dbxref=GenBank:WP_002212061.1;Name=WP_002212061.1;Ontology_term=GO:0006814,GO:0016655;gbkey=CDS;gene=nqrE;go_function=oxidoreductase activity%2C acting on NAD(P)H%2C quinone or similar compound as acceptor|0016655||IEA;go_process=sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011906232.1;locus_tag=AD853_RS03150;product=NADH:ubiquinone reductase (Na(+)-transporting) subunit E;protein_id=WP_002212061.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 227059 228219 . + . ID=gene-AD853_RS03155;Name=AD853_RS03155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS03155;old_locus_tag=ERS008462_00637 NZ_CPUY01000002.1 Protein Homology CDS 227059 228219 . + 0 ID=cds-WP_038823696.1;Parent=gene-AD853_RS03155;Dbxref=GenBank:WP_038823696.1;Name=WP_038823696.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212060.1;locus_tag=AD853_RS03155;product=aminotransferase-like domain-containing protein;protein_id=WP_038823696.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 228415 229944 . - . ID=gene-AD853_RS03160;Name=ansP;gbkey=Gene;gene=ansP;gene_biotype=protein_coding;locus_tag=AD853_RS03160;old_locus_tag=ERS008462_00638 NZ_CPUY01000002.1 Protein Homology CDS 228415 229944 . - 0 ID=cds-WP_038823698.1;Parent=gene-AD853_RS03160;Dbxref=GenBank:WP_038823698.1;Name=WP_038823698.1;Ontology_term=GO:0006865,GO:0016020;gbkey=CDS;gene=ansP;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212059.1;locus_tag=AD853_RS03160;product=L-asparagine permease;protein_id=WP_038823698.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 230709 231479 . - . ID=gene-AD853_RS03165;Name=ygbI;gbkey=Gene;gene=ygbI;gene_biotype=protein_coding;locus_tag=AD853_RS03165;old_locus_tag=ERS008462_00639 NZ_CPUY01000002.1 Protein Homology CDS 230709 231479 . - 0 ID=cds-WP_038823699.1;Parent=gene-AD853_RS03165;Dbxref=GenBank:WP_038823699.1;Name=WP_038823699.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=ygbI;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212058.1;locus_tag=AD853_RS03165;product=DNA-binding transcriptional repressor YgbI;protein_id=WP_038823699.1;transl_table=11 NZ_CPUY01000002.1 RefSeq pseudogene 232032 232239 . + . ID=gene-AD853_RS03170;Name=AD853_RS03170;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD853_RS03170;pseudo=true NZ_CPUY01000002.1 Protein Homology CDS 232032 232239 . + 0 ID=cds-AD853_RS03170;Parent=gene-AD853_RS03170;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002213974.1;locus_tag=AD853_RS03170;product=hydroxypyruvate isomerase;pseudo=true;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 232691 233698 . + . ID=gene-AD853_RS03175;Name=glsA;gbkey=Gene;gene=glsA;gene_biotype=protein_coding;locus_tag=AD853_RS03175;old_locus_tag=ERS008462_00640 NZ_CPUY01000002.1 Protein Homology CDS 232691 233698 . + 0 ID=cds-WP_002212056.1;Parent=gene-AD853_RS03175;Dbxref=GenBank:WP_002212056.1;Name=WP_002212056.1;Ontology_term=GO:0006541,GO:0004359;gbkey=CDS;gene=glsA;go_function=glutaminase activity|0004359||IEA;go_process=glutamine metabolic process|0006541||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212056.1;locus_tag=AD853_RS03175;product=glutaminase A;protein_id=WP_002212056.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 233809 235449 . + . ID=gene-AD853_RS03180;Name=AD853_RS03180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS03180;old_locus_tag=ERS008462_00641 NZ_CPUY01000002.1 Protein Homology CDS 233809 235449 . + 0 ID=cds-WP_002213976.1;Parent=gene-AD853_RS03180;Dbxref=GenBank:WP_002213976.1;Name=WP_002213976.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016256492.1;locus_tag=AD853_RS03180;product=MFS transporter;protein_id=WP_002213976.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 236031 237950 . + . ID=gene-AD853_RS03185;Name=AD853_RS03185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS03185;old_locus_tag=ERS008462_00642 NZ_CPUY01000002.1 Protein Homology CDS 236031 237950 . + 0 ID=cds-WP_038825221.1;Parent=gene-AD853_RS03185;Dbxref=GenBank:WP_038825221.1;Name=WP_038825221.1;Ontology_term=GO:0034755,GO:0005381,GO:0033573;gbkey=CDS;go_component=high-affinity iron permease complex|0033573||IEA;go_function=iron ion transmembrane transporter activity|0005381||IEA;go_process=iron ion transmembrane transport|0034755||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192362.1;locus_tag=AD853_RS03185;product=FTR1 family iron permease;protein_id=WP_038825221.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 238154 238681 . + . ID=gene-AD853_RS03190;Name=AD853_RS03190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS03190;old_locus_tag=ERS008462_00643 NZ_CPUY01000002.1 Protein Homology CDS 238154 238681 . + 0 ID=cds-WP_002212053.1;Parent=gene-AD853_RS03190;Dbxref=GenBank:WP_002212053.1;Name=WP_002212053.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016674077.1;locus_tag=AD853_RS03190;product=iron transporter;protein_id=WP_002212053.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 238967 240376 . + . ID=gene-AD853_RS03195;Name=AD853_RS03195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS03195;old_locus_tag=ERS008462_00644 NZ_CPUY01000002.1 Protein Homology CDS 238967 240376 . + 0 ID=cds-WP_002212052.1;Parent=gene-AD853_RS03195;Dbxref=GenBank:WP_002212052.1;Name=WP_002212052.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212052.1;locus_tag=AD853_RS03195;product=Fe-S-containing protein;protein_id=WP_002212052.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 240379 241671 . + . ID=gene-AD853_RS03200;Name=AD853_RS03200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS03200;old_locus_tag=ERS008462_00645 NZ_CPUY01000002.1 Protein Homology CDS 240379 241671 . + 0 ID=cds-WP_002212051.1;Parent=gene-AD853_RS03200;Dbxref=GenBank:WP_002212051.1;Name=WP_002212051.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011906231.1;locus_tag=AD853_RS03200;product=ABC transporter permease;protein_id=WP_002212051.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 241712 242824 . + . ID=gene-AD853_RS03205;Name=AD853_RS03205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS03205;old_locus_tag=ERS008462_00646 NZ_CPUY01000002.1 Protein Homology CDS 241712 242824 . + 0 ID=cds-WP_002353352.1;Parent=gene-AD853_RS03205;Dbxref=GenBank:WP_002353352.1;Name=WP_002353352.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002353352.1;locus_tag=AD853_RS03205;product=ABC transporter permease;protein_id=WP_002353352.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 242828 243541 . + . ID=gene-AD853_RS03210;Name=AD853_RS03210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS03210;old_locus_tag=ERS008462_00647 NZ_CPUY01000002.1 Protein Homology CDS 242828 243541 . + 0 ID=cds-WP_038825219.1;Parent=gene-AD853_RS03210;Dbxref=GenBank:WP_038825219.1;Name=WP_038825219.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192364.1;locus_tag=AD853_RS03210;product=ABC transporter ATP-binding protein;protein_id=WP_038825219.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 243531 244028 . + . ID=gene-AD853_RS03215;Name=AD853_RS03215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS03215;old_locus_tag=ERS008462_00648 NZ_CPUY01000002.1 Protein Homology CDS 243531 244028 . + 0 ID=cds-WP_002212048.1;Parent=gene-AD853_RS03215;Dbxref=GenBank:WP_002212048.1;Name=WP_002212048.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016674078.1;locus_tag=AD853_RS03215;product=TlpA family protein disulfide reductase;protein_id=WP_002212048.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 244028 244339 . + . ID=gene-AD853_RS03220;Name=AD853_RS03220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS03220;old_locus_tag=ERS008462_00649 NZ_CPUY01000002.1 Protein Homology CDS 244028 244339 . + 0 ID=cds-WP_002227951.1;Parent=gene-AD853_RS03220;Dbxref=GenBank:WP_002227951.1;Name=WP_002227951.1;Ontology_term=GO:0009055,GO:0020037,GO:0046872;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105177.1;locus_tag=AD853_RS03220;product=c-type cytochrome;protein_id=WP_002227951.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 244512 245399 . + . ID=gene-AD853_RS03225;Name=tehB;gbkey=Gene;gene=tehB;gene_biotype=protein_coding;locus_tag=AD853_RS03225;old_locus_tag=ERS008462_00650 NZ_CPUY01000002.1 Protein Homology CDS 244512 245399 . + 0 ID=cds-WP_002212046.1;Parent=gene-AD853_RS03225;Dbxref=GenBank:WP_002212046.1;Name=WP_002212046.1;Ontology_term=GO:0046690,GO:0008757;gbkey=CDS;gene=tehB;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=response to tellurium ion|0046690||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212046.1;locus_tag=AD853_RS03225;product=SAM-dependent methyltransferase TehB;protein_id=WP_002212046.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 245540 246757 . + . ID=gene-AD853_RS03230;Name=AD853_RS03230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS03230;old_locus_tag=ERS008462_00651 NZ_CPUY01000002.1 Protein Homology CDS 245540 246757 . + 0 ID=cds-WP_038825217.1;Parent=gene-AD853_RS03230;Dbxref=GenBank:WP_038825217.1;Name=WP_038825217.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192365.1;locus_tag=AD853_RS03230;product=M24 family metallopeptidase;protein_id=WP_038825217.1;transl_table=11 NZ_CPUY01000002.1 RefSeq pseudogene 247426 249893 . + . ID=gene-AD853_RS03235;Name=pgaA;gbkey=Gene;gene=pgaA;gene_biotype=pseudogene;locus_tag=AD853_RS03235;pseudo=true NZ_CPUY01000002.1 Protein Homology CDS 247426 249893 . + 0 ID=cds-AD853_RS03235;Parent=gene-AD853_RS03235;Note=frameshifted;gbkey=CDS;gene=pgaA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212044.1;locus_tag=AD853_RS03235;product=poly-beta-1%2C6 N-acetyl-D-glucosamine export porin PgaA;pseudo=true;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 249906 251927 . + . ID=gene-AD853_RS03240;Name=pgaB;gbkey=Gene;gene=pgaB;gene_biotype=protein_coding;locus_tag=AD853_RS03240;old_locus_tag=ERS008462_00654 NZ_CPUY01000002.1 Protein Homology CDS 249906 251927 . + 0 ID=cds-WP_002212043.1;Parent=gene-AD853_RS03240;Dbxref=GenBank:WP_002212043.1;Name=WP_002212043.1;gbkey=CDS;gene=pgaB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011906229.1;locus_tag=AD853_RS03240;product=poly-beta-1%2C6-N-acetyl-D-glucosamine N-deacetylase PgaB;protein_id=WP_002212043.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 251917 253251 . + . ID=gene-AD853_RS03245;Name=pgaC;gbkey=Gene;gene=pgaC;gene_biotype=protein_coding;locus_tag=AD853_RS03245;old_locus_tag=ERS008462_00655 NZ_CPUY01000002.1 Protein Homology CDS 251917 253251 . + 0 ID=cds-WP_038825215.1;Parent=gene-AD853_RS03245;Dbxref=GenBank:WP_038825215.1;Name=WP_038825215.1;Ontology_term=GO:0042710,GO:0008375;gbkey=CDS;gene=pgaC;go_function=acetylglucosaminyltransferase activity|0008375||IEA;go_process=biofilm formation|0042710||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002224456.1;locus_tag=AD853_RS03245;product=poly-beta-1%2C6-N-acetyl-D-glucosamine synthase;protein_id=WP_038825215.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 253248 253715 . + . ID=gene-AD853_RS03250;Name=pgaD;gbkey=Gene;gene=pgaD;gene_biotype=protein_coding;locus_tag=AD853_RS03250;old_locus_tag=ERS008462_00656 NZ_CPUY01000002.1 Protein Homology CDS 253248 253715 . + 0 ID=cds-WP_038825213.1;Parent=gene-AD853_RS03250;Dbxref=GenBank:WP_038825213.1;Name=WP_038825213.1;gbkey=CDS;gene=pgaD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192367.1;locus_tag=AD853_RS03250;product=poly-beta-1%2C6-N-acetyl-D-glucosamine biosynthesis protein PgaD;protein_id=WP_038825213.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 254348 254947 . + . ID=gene-AD853_RS03255;Name=AD853_RS03255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS03255;old_locus_tag=ERS008462_00657 NZ_CPUY01000002.1 Protein Homology CDS 254348 254947 . + 0 ID=cds-WP_002353354.1;Parent=gene-AD853_RS03255;Dbxref=GenBank:WP_002353354.1;Name=WP_002353354.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002353354.1;locus_tag=AD853_RS03255;product=GNAT family N-acetyltransferase;protein_id=WP_002353354.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 255386 255664 . + . ID=gene-AD853_RS03260;Name=AD853_RS03260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS03260;old_locus_tag=ERS008462_00658 NZ_CPUY01000002.1 Protein Homology CDS 255386 255664 . + 0 ID=cds-WP_012304141.1;Parent=gene-AD853_RS03260;Dbxref=GenBank:WP_012304141.1;Name=WP_012304141.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105175.1;locus_tag=AD853_RS03260;product=hypothetical protein;protein_id=WP_012304141.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 255724 256512 . + . ID=gene-AD853_RS03265;Name=phoH;gbkey=Gene;gene=phoH;gene_biotype=protein_coding;locus_tag=AD853_RS03265;old_locus_tag=ERS008462_00659 NZ_CPUY01000002.1 Protein Homology CDS 255724 256512 . + 0 ID=cds-WP_002212037.1;Parent=gene-AD853_RS03265;Dbxref=GenBank:WP_002212037.1;Name=WP_002212037.1;gbkey=CDS;gene=phoH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001741490.1;locus_tag=AD853_RS03265;product=phosphate starvation-inducible protein PhoH;protein_id=WP_002212037.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 256615 257715 . - . ID=gene-AD853_RS03270;Name=chaA;gbkey=Gene;gene=chaA;gene_biotype=protein_coding;locus_tag=AD853_RS03270;old_locus_tag=ERS008462_00660 NZ_CPUY01000002.1 Protein Homology CDS 256615 257715 . - 0 ID=cds-WP_002212036.1;Parent=gene-AD853_RS03270;Dbxref=GenBank:WP_002212036.1;Name=WP_002212036.1;gbkey=CDS;gene=chaA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004706461.1;locus_tag=AD853_RS03270;product=sodium-potassium/proton antiporter ChaA;protein_id=WP_002212036.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 258231 260012 . - . ID=gene-AD853_RS03275;Name=narX;gbkey=Gene;gene=narX;gene_biotype=protein_coding;locus_tag=AD853_RS03275;old_locus_tag=ERS008462_00661 NZ_CPUY01000002.1 Protein Homology CDS 258231 260012 . - 0 ID=cds-WP_038825212.1;Parent=gene-AD853_RS03275;Dbxref=GenBank:WP_038825212.1;Name=WP_038825212.1;Ontology_term=GO:0000160,GO:0000155,GO:0046983,GO:0016020;gbkey=CDS;gene=narX;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein dimerization activity|0046983||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212035.1;locus_tag=AD853_RS03275;product=nitrate/nitrite two-component system sensor histidine kinase NarX;protein_id=WP_038825212.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 260080 260199 . - . ID=gene-AD853_RS22585;Name=AD853_RS22585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS22585 NZ_CPUY01000002.1 Protein Homology CDS 260080 260199 . - 0 ID=cds-WP_370696108.1;Parent=gene-AD853_RS22585;Dbxref=GenBank:WP_370696108.1;Name=WP_370696108.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004390769.1;locus_tag=AD853_RS22585;product=DUF2474 domain-containing protein;protein_id=WP_370696108.1;transl_table=11 NZ_CPUY01000002.1 RefSeq pseudogene 260322 261753 . + . ID=gene-AD853_RS03280;Name=AD853_RS03280;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD853_RS03280;old_locus_tag=ERS008462_00662;pseudo=true NZ_CPUY01000002.1 Protein Homology CDS 260322 261753 . + 0 ID=cds-AD853_RS03280;Parent=gene-AD853_RS03280;Note=frameshifted;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212033.1;locus_tag=AD853_RS03280;product=aminotransferase-like domain-containing protein;pseudo=true;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 262390 263634 . + . ID=gene-AD853_RS03290;Name=AD853_RS03290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS03290;old_locus_tag=ERS008462_00665 NZ_CPUY01000002.1 Protein Homology CDS 262390 263634 . + 0 ID=cds-WP_038825209.1;Parent=gene-AD853_RS03290;Dbxref=GenBank:WP_038825209.1;Name=WP_038825209.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105173.1;locus_tag=AD853_RS03290;product=aspartate aminotransferase family protein;protein_id=WP_038825209.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 263664 264716 . + . ID=gene-AD853_RS03295;Name=astA;gbkey=Gene;gene=astA;gene_biotype=protein_coding;locus_tag=AD853_RS03295;old_locus_tag=ERS008462_00666 NZ_CPUY01000002.1 Protein Homology CDS 263664 264716 . + 0 ID=cds-WP_038825208.1;Parent=gene-AD853_RS03295;Dbxref=GenBank:WP_038825208.1;Name=WP_038825208.1;Ontology_term=GO:0006527,GO:0008791;gbkey=CDS;gene=astA;go_function=arginine N-succinyltransferase activity|0008791||IEA;go_process=L-arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192371.1;locus_tag=AD853_RS03295;product=arginine N-succinyltransferase;protein_id=WP_038825208.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 264713 266230 . + . ID=gene-AD853_RS03300;Name=astD;gbkey=Gene;gene=astD;gene_biotype=protein_coding;locus_tag=AD853_RS03300;old_locus_tag=ERS008462_00667 NZ_CPUY01000002.1 Protein Homology CDS 264713 266230 . + 0 ID=cds-WP_050124565.1;Parent=gene-AD853_RS03300;Dbxref=GenBank:WP_050124565.1;Name=WP_050124565.1;Ontology_term=GO:0006527,GO:0043824;gbkey=CDS;gene=astD;go_function=succinylglutamate-semialdehyde dehydrogenase activity|0043824||IEA;go_process=L-arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011906226.1;locus_tag=AD853_RS03300;product=succinylglutamate-semialdehyde dehydrogenase;protein_id=WP_050124565.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 266254 267597 . + . ID=gene-AD853_RS03305;Name=astB;gbkey=Gene;gene=astB;gene_biotype=protein_coding;locus_tag=AD853_RS03305;old_locus_tag=ERS008462_00668 NZ_CPUY01000002.1 Protein Homology CDS 266254 267597 . + 0 ID=cds-WP_038825206.1;Parent=gene-AD853_RS03305;Dbxref=GenBank:WP_038825206.1;Name=WP_038825206.1;Ontology_term=GO:0006527,GO:0009015;gbkey=CDS;gene=astB;go_function=N-succinylarginine dihydrolase activity|0009015||IEA;go_process=L-arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105170.1;locus_tag=AD853_RS03305;product=N-succinylarginine dihydrolase;protein_id=WP_038825206.1;transl_table=11 NZ_CPUY01000002.1 RefSeq pseudogene 267658 268215 . + . ID=gene-AD853_RS03310;Name=AD853_RS03310;end_range=268215,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD853_RS03310;old_locus_tag=ERS008462_00669;partial=true;pseudo=true NZ_CPUY01000002.1 Protein Homology CDS 267658 268215 . + 0 ID=cds-AD853_RS03310;Parent=gene-AD853_RS03310;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=268215,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212028.1;locus_tag=AD853_RS03310;partial=true;product=succinylglutamate desuccinylase;pseudo=true;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 268800 269606 . - . ID=gene-AD853_RS03315;Name=hutG;gbkey=Gene;gene=hutG;gene_biotype=protein_coding;locus_tag=AD853_RS03315;old_locus_tag=ERS008462_00670 NZ_CPUY01000002.1 Protein Homology CDS 268800 269606 . - 0 ID=cds-WP_012105168.1;Parent=gene-AD853_RS03315;Dbxref=GenBank:WP_012105168.1;Name=WP_012105168.1;Ontology_term=GO:0019557,GO:0050129;gbkey=CDS;gene=hutG;go_function=N-formylglutamate deformylase activity|0050129||IEA;go_process=L-histidine catabolic process to glutamate and formate|0019557||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105168.1;locus_tag=AD853_RS03315;product=N-formylglutamate deformylase;protein_id=WP_012105168.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 269603 270823 . - . ID=gene-AD853_RS03320;Name=hutI;gbkey=Gene;gene=hutI;gene_biotype=protein_coding;locus_tag=AD853_RS03320;old_locus_tag=ERS008462_00671 NZ_CPUY01000002.1 Protein Homology CDS 269603 270823 . - 0 ID=cds-WP_011192374.1;Parent=gene-AD853_RS03320;Dbxref=GenBank:WP_011192374.1;Name=WP_011192374.1;Ontology_term=GO:0019556,GO:0016812,GO:0050480,GO:0005737;gbkey=CDS;gene=hutI;go_component=cytoplasm|0005737||IEA;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds%2C in cyclic amides|0016812||IEA,imidazolonepropionase activity|0050480||IEA;go_process=L-histidine catabolic process to glutamate and formamide|0019556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304136.1;locus_tag=AD853_RS03320;product=imidazolonepropionase;protein_id=WP_011192374.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 271027 271794 . - . ID=gene-AD853_RS03325;Name=hutC;gbkey=Gene;gene=hutC;gene_biotype=protein_coding;locus_tag=AD853_RS03325;old_locus_tag=ERS008462_00672 NZ_CPUY01000002.1 Protein Homology CDS 271027 271794 . - 0 ID=cds-WP_002211280.1;Parent=gene-AD853_RS03325;Dbxref=GenBank:WP_002211280.1;Name=WP_002211280.1;Ontology_term=GO:0006355,GO:0006547,GO:0045892,GO:0003677,GO:0003700;gbkey=CDS;gene=hutC;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,L-histidine metabolic process|0006547||IEA,negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005185115.1;locus_tag=AD853_RS03325;product=histidine utilization repressor;protein_id=WP_002211280.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 271942 273312 . + . ID=gene-AD853_RS03330;Name=AD853_RS03330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS03330;old_locus_tag=ERS008462_00673 NZ_CPUY01000002.1 Protein Homology CDS 271942 273312 . + 0 ID=cds-WP_038824574.1;Parent=gene-AD853_RS03330;Dbxref=GenBank:WP_038824574.1;Name=WP_038824574.1;Ontology_term=GO:0016810;gbkey=CDS;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005271963.1;locus_tag=AD853_RS03330;product=formimidoylglutamate deiminase;protein_id=WP_038824574.1;transl_table=11 NZ_CPUY01000002.1 RefSeq pseudogene 273312 273885 . + . ID=gene-AD853_RS03335;Name=AD853_RS03335;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD853_RS03335;old_locus_tag=ERS008462_00674;pseudo=true NZ_CPUY01000002.1 Protein Homology CDS 273312 273885 . + 0 ID=cds-AD853_RS03335;Parent=gene-AD853_RS03335;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211278.1;locus_tag=AD853_RS03335;product=HutD/Ves family protein;pseudo=true;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 274063 275667 . - . ID=gene-AD853_RS03340;Name=AD853_RS03340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS03340;old_locus_tag=ERS008462_00675 NZ_CPUY01000002.1 Protein Homology CDS 274063 275667 . - 0 ID=cds-WP_038824575.1;Parent=gene-AD853_RS03340;Dbxref=GenBank:WP_038824575.1;Name=WP_038824575.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012229736.1;locus_tag=AD853_RS03340;product=chorismate-binding protein;protein_id=WP_038824575.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 276662 277669 . + . ID=gene-AD853_RS03345;Name=AD853_RS03345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS03345;old_locus_tag=ERS008462_00676 NZ_CPUY01000002.1 Protein Homology CDS 276662 277669 . + 0 ID=cds-WP_038399900.1;Parent=gene-AD853_RS03345;Dbxref=GenBank:WP_038399900.1;Name=WP_038399900.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192379.1;locus_tag=AD853_RS03345;product=3-oxoacyl-[acyl-carrier-protein] synthase III C-terminal domain-containing protein;protein_id=WP_038399900.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 277683 278699 . + . ID=gene-AD853_RS03350;Name=AD853_RS03350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS03350;old_locus_tag=ERS008462_00677 NZ_CPUY01000002.1 Protein Homology CDS 277683 278699 . + 0 ID=cds-WP_011192380.1;Parent=gene-AD853_RS03350;Dbxref=GenBank:WP_011192380.1;Name=WP_011192380.1;Ontology_term=GO:0016491,GO:0051287,GO:0070403;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD binding|0051287||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211275.1;locus_tag=AD853_RS03350;product=NAD-dependent epimerase/dehydratase family protein;protein_id=WP_011192380.1;transl_table=11 NZ_CPUY01000002.1 RefSeq pseudogene 278692 279499 . + . ID=gene-AD853_RS03355;Name=AD853_RS03355;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD853_RS03355;old_locus_tag=ERS008462_00678;pseudo=true NZ_CPUY01000002.1 Protein Homology CDS 278692 279499 . + 0 ID=cds-AD853_RS03355;Parent=gene-AD853_RS03355;Note=frameshifted;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002214335.1;locus_tag=AD853_RS03355;product=MBL fold metallo-hydrolase;pseudo=true;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 279496 280782 . + . ID=gene-AD853_RS03360;Name=AD853_RS03360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS03360;old_locus_tag=ERS008462_00679 NZ_CPUY01000002.1 Protein Homology CDS 279496 280782 . + 0 ID=cds-WP_038824577.1;Parent=gene-AD853_RS03360;Dbxref=GenBank:WP_038824577.1;Name=WP_038824577.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192382.1;locus_tag=AD853_RS03360;product=F390 synthetase-related protein;protein_id=WP_038824577.1;transl_table=11 NZ_CPUY01000002.1 RefSeq pseudogene 280916 281808 . + . ID=gene-AD853_RS03365;Name=AD853_RS03365;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD853_RS03365;old_locus_tag=ERS008462_00681;pseudo=true NZ_CPUY01000002.1 Protein Homology CDS 280916 281808 . + 0 ID=cds-AD853_RS03365;Parent=gene-AD853_RS03365;Note=frameshifted;Ontology_term=GO:0016491,GO:0051287,GO:0070403;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD binding|0051287||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211271.1;locus_tag=AD853_RS03365;product=NAD-dependent epimerase/dehydratase family protein;pseudo=true;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 281808 282962 . + . ID=gene-AD853_RS03370;Name=AD853_RS03370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS03370;old_locus_tag=ERS008462_00682 NZ_CPUY01000002.1 Protein Homology CDS 281808 282962 . + 0 ID=cds-WP_038824578.1;Parent=gene-AD853_RS03370;Dbxref=GenBank:WP_038824578.1;Name=WP_038824578.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192384.1;locus_tag=AD853_RS03370;product=glycosyltransferase;protein_id=WP_038824578.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 282959 283543 . + . ID=gene-AD853_RS03375;Name=AD853_RS03375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS03375;old_locus_tag=ERS008462_00683 NZ_CPUY01000002.1 Protein Homology CDS 282959 283543 . + 0 ID=cds-WP_038824579.1;Parent=gene-AD853_RS03375;Dbxref=GenBank:WP_038824579.1;Name=WP_038824579.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211270.1;locus_tag=AD853_RS03375;product=hypothetical protein;protein_id=WP_038824579.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 283540 284727 . + . ID=gene-AD853_RS03380;Name=AD853_RS03380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS03380;old_locus_tag=ERS008462_00684 NZ_CPUY01000002.1 Protein Homology CDS 283540 284727 . + 0 ID=cds-WP_038824581.1;Parent=gene-AD853_RS03380;Dbxref=GenBank:WP_038824581.1;Name=WP_038824581.1;Ontology_term=GO:0009101,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=glycoprotein biosynthetic process|0009101||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105159.1;locus_tag=AD853_RS03380;product=glycosyltransferase;protein_id=WP_038824581.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 284888 285352 . - . ID=gene-AD853_RS03385;Name=AD853_RS03385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS03385;old_locus_tag=ERS008462_00685 NZ_CPUY01000002.1 Protein Homology CDS 284888 285352 . - 0 ID=cds-WP_038824582.1;Parent=gene-AD853_RS03385;Dbxref=GenBank:WP_038824582.1;Name=WP_038824582.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211268.1;locus_tag=AD853_RS03385;product=hypothetical protein;protein_id=WP_038824582.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 285522 287180 . - . ID=gene-AD853_RS03390;Name=AD853_RS03390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS03390;old_locus_tag=ERS008462_00686 NZ_CPUY01000002.1 Protein Homology CDS 285522 287180 . - 0 ID=cds-WP_038824597.1;Parent=gene-AD853_RS03390;Dbxref=GenBank:WP_038824597.1;Name=WP_038824597.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002226916.1;locus_tag=AD853_RS03390;product=tetratricopeptide repeat protein;protein_id=WP_038824597.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 287304 289466 . - . ID=gene-AD853_RS03395;Name=AD853_RS03395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS03395;old_locus_tag=ERS008462_00687 NZ_CPUY01000002.1 Protein Homology CDS 287304 289466 . - 0 ID=cds-WP_038824584.1;Parent=gene-AD853_RS03395;Dbxref=GenBank:WP_038824584.1;Name=WP_038824584.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304128.1;locus_tag=AD853_RS03395;product=SEL1-like repeat protein;protein_id=WP_038824584.1;transl_table=11 NZ_CPUY01000002.1 RefSeq pseudogene 290044 292171 . + . ID=gene-AD853_RS03400;Name=AD853_RS03400;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD853_RS03400;old_locus_tag=ERS008462_00690;pseudo=true NZ_CPUY01000002.1 Protein Homology CDS 290044 292171 . + 0 ID=cds-AD853_RS03400;Parent=gene-AD853_RS03400;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211265.1;locus_tag=AD853_RS03400;product=DUF4034 domain-containing protein;pseudo=true;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 292418 293056 . + . ID=gene-AD853_RS03410;Name=AD853_RS03410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS03410;old_locus_tag=ERS008462_00691 NZ_CPUY01000002.1 Protein Homology CDS 292418 293056 . + 0 ID=cds-WP_002211263.1;Parent=gene-AD853_RS03410;Dbxref=GenBank:WP_002211263.1;Name=WP_002211263.1;Ontology_term=GO:0005975,GO:0016853;gbkey=CDS;go_function=isomerase activity|0016853||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227724.1;locus_tag=AD853_RS03410;product=RpiB/LacA/LacB family sugar-phosphate isomerase;protein_id=WP_002211263.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 293191 293850 . - . ID=gene-AD853_RS03415;Name=AD853_RS03415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS03415;old_locus_tag=ERS008462_00692 NZ_CPUY01000002.1 Protein Homology CDS 293191 293850 . - 0 ID=cds-WP_002211262.1;Parent=gene-AD853_RS03415;Dbxref=GenBank:WP_002211262.1;Name=WP_002211262.1;Ontology_term=GO:0008168,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211262.1;locus_tag=AD853_RS03415;product=class I SAM-dependent methyltransferase;protein_id=WP_002211262.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 293955 294635 . - . ID=gene-AD853_RS03420;Name=AD853_RS03420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS03420;old_locus_tag=ERS008462_00693 NZ_CPUY01000002.1 Protein Homology CDS 293955 294635 . - 0 ID=cds-WP_032466380.1;Parent=gene-AD853_RS03420;Dbxref=GenBank:WP_032466380.1;Name=WP_032466380.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211261.1;locus_tag=AD853_RS03420;product=SDR family oxidoreductase;protein_id=WP_032466380.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 294787 294930 . - . ID=gene-AD853_RS21735;Name=AD853_RS21735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS21735;old_locus_tag=ERS008462_00694 NZ_CPUY01000002.1 Protein Homology CDS 294787 294930 . - 0 ID=cds-WP_002214321.1;Parent=gene-AD853_RS21735;Dbxref=GenBank:WP_002214321.1;Name=WP_002214321.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002214321.1;locus_tag=AD853_RS21735;product=hypothetical protein;protein_id=WP_002214321.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 294976 295926 . - . ID=gene-AD853_RS03425;Name=AD853_RS03425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS03425;old_locus_tag=ERS008462_00695 NZ_CPUY01000002.1 Protein Homology CDS 294976 295926 . - 0 ID=cds-WP_038824586.1;Parent=gene-AD853_RS03425;Dbxref=GenBank:WP_038824586.1;Name=WP_038824586.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002224463.1;locus_tag=AD853_RS03425;product=hypothetical protein;protein_id=WP_038824586.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 295913 296845 . - . ID=gene-AD853_RS03430;Name=AD853_RS03430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS03430;old_locus_tag=ERS008462_00696 NZ_CPUY01000002.1 Protein Homology CDS 295913 296845 . - 0 ID=cds-WP_002211259.1;Parent=gene-AD853_RS03430;Dbxref=GenBank:WP_002211259.1;Name=WP_002211259.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012229703.1;locus_tag=AD853_RS03430;product=hypothetical protein;protein_id=WP_002211259.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 296851 297756 . - . ID=gene-AD853_RS03435;Name=AD853_RS03435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS03435;old_locus_tag=ERS008462_00697 NZ_CPUY01000002.1 Protein Homology CDS 296851 297756 . - 0 ID=cds-WP_038824587.1;Parent=gene-AD853_RS03435;Dbxref=GenBank:WP_038824587.1;Name=WP_038824587.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105154.1;locus_tag=AD853_RS03435;product=HEAT repeat domain-containing protein;protein_id=WP_038824587.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 298548 299621 . - . ID=gene-AD853_RS03440;Name=AD853_RS03440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS03440;old_locus_tag=ERS008462_00698 NZ_CPUY01000002.1 Protein Homology CDS 298548 299621 . - 0 ID=cds-WP_050124566.1;Parent=gene-AD853_RS03440;Dbxref=GenBank:WP_050124566.1;Name=WP_050124566.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192391.1;locus_tag=AD853_RS03440;product=alpha/beta hydrolase;protein_id=WP_050124566.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 299834 300304 . - . ID=gene-AD853_RS03445;Name=AD853_RS03445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS03445;old_locus_tag=ERS008462_00699 NZ_CPUY01000002.1 Protein Homology CDS 299834 300304 . - 0 ID=cds-WP_038824590.1;Parent=gene-AD853_RS03445;Dbxref=GenBank:WP_038824590.1;Name=WP_038824590.1;Ontology_term=GO:0016829,GO:0046872;gbkey=CDS;go_function=lyase activity|0016829||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304126.1;locus_tag=AD853_RS03445;product=(R)-mandelonitrile lyase;protein_id=WP_038824590.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 300359 300781 . - . ID=gene-AD853_RS03450;Name=AD853_RS03450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS03450;old_locus_tag=ERS008462_00700 NZ_CPUY01000002.1 Protein Homology CDS 300359 300781 . - 0 ID=cds-WP_038824592.1;Parent=gene-AD853_RS03450;Dbxref=GenBank:WP_038824592.1;Name=WP_038824592.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211255.1;locus_tag=AD853_RS03450;product=carboxymuconolactone decarboxylase family protein;protein_id=WP_038824592.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 301058 302443 . - . ID=gene-AD853_RS03455;Name=AD853_RS03455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS03455;old_locus_tag=ERS008462_00701 NZ_CPUY01000002.1 Protein Homology CDS 301058 302443 . - 0 ID=cds-WP_038824593.1;Parent=gene-AD853_RS03455;Dbxref=GenBank:WP_038824593.1;Name=WP_038824593.1;Ontology_term=GO:0000160,GO:0016310,GO:0000155,GO:0004673,GO:0016772,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,transferase activity%2C transferring phosphorus-containing groups|0016772||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211254.1;locus_tag=AD853_RS03455;product=heavy metal sensor histidine kinase;protein_id=WP_038824593.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 302455 303147 . - . ID=gene-AD853_RS03460;Name=AD853_RS03460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS03460;old_locus_tag=ERS008462_00702 NZ_CPUY01000002.1 Protein Homology CDS 302455 303147 . - 0 ID=cds-WP_002211253.1;Parent=gene-AD853_RS03460;Dbxref=GenBank:WP_002211253.1;Name=WP_002211253.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211253.1;locus_tag=AD853_RS03460;product=heavy metal response regulator transcription factor;protein_id=WP_002211253.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 303412 304482 . + . ID=gene-AD853_RS03465;Name=AD853_RS03465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS03465;old_locus_tag=ERS008462_00703 NZ_CPUY01000002.1 Protein Homology CDS 303412 304482 . + 0 ID=cds-WP_038824594.1;Parent=gene-AD853_RS03465;Dbxref=GenBank:WP_038824594.1;Name=WP_038824594.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304125.1;locus_tag=AD853_RS03465;product=alpha/beta hydrolase;protein_id=WP_038824594.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 304673 305338 . + . ID=gene-AD853_RS03470;Name=AD853_RS03470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS03470;old_locus_tag=ERS008462_00704 NZ_CPUY01000002.1 Protein Homology CDS 304673 305338 . + 0 ID=cds-WP_002211251.1;Parent=gene-AD853_RS03470;Dbxref=GenBank:WP_002211251.1;Name=WP_002211251.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192394.1;locus_tag=AD853_RS03470;product=flavodoxin;protein_id=WP_002211251.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 305353 306048 . + . ID=gene-AD853_RS03475;Name=AD853_RS03475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS03475;old_locus_tag=ERS008462_00705 NZ_CPUY01000002.1 Protein Homology CDS 305353 306048 . + 0 ID=cds-WP_011192395.1;Parent=gene-AD853_RS03475;Dbxref=GenBank:WP_011192395.1;Name=WP_011192395.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211250.1;locus_tag=AD853_RS03475;product=DUF4405 domain-containing protein;protein_id=WP_011192395.1;transl_table=11 NZ_CPUY01000002.1 RefSeq pseudogene 306256 307099 . - . ID=gene-AD853_RS03480;Name=AD853_RS03480;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD853_RS03480;old_locus_tag=ERS008462_00706;pseudo=true NZ_CPUY01000002.1 Protein Homology CDS 306256 307099 . - 0 ID=cds-AD853_RS03480;Parent=gene-AD853_RS03480;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211249.1;locus_tag=AD853_RS03480;product=DUF4087 domain-containing protein;pseudo=true;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 307729 308385 . + . ID=gene-AD853_RS03485;Name=AD853_RS03485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS03485;old_locus_tag=ERS008462_00707 NZ_CPUY01000002.1 Protein Homology CDS 307729 308385 . + 0 ID=cds-WP_011906220.1;Parent=gene-AD853_RS03485;Dbxref=GenBank:WP_011906220.1;Name=WP_011906220.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011906220.1;locus_tag=AD853_RS03485;product=hypothetical protein;protein_id=WP_011906220.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 308382 309275 . + . ID=gene-AD853_RS03490;Name=AD853_RS03490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS03490;old_locus_tag=ERS008462_00708 NZ_CPUY01000002.1 Protein Homology CDS 308382 309275 . + 0 ID=cds-WP_038824595.1;Parent=gene-AD853_RS03490;Dbxref=GenBank:WP_038824595.1;Name=WP_038824595.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211248.1;locus_tag=AD853_RS03490;product=alpha/beta hydrolase fold domain-containing protein;protein_id=WP_038824595.1;transl_table=11 NZ_CPUY01000002.1 RefSeq gene 309283 309681 . + . ID=gene-AD853_RS03495;Name=AD853_RS03495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS03495;old_locus_tag=ERS008462_00709 NZ_CPUY01000002.1 Protein Homology CDS 309283 309681 . + 0 ID=cds-WP_002211247.1;Parent=gene-AD853_RS03495;Dbxref=GenBank:WP_002211247.1;Name=WP_002211247.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211247.1;locus_tag=AD853_RS03495;product=rhodanese-like domain-containing protein;protein_id=WP_002211247.1;transl_table=11 NZ_CPUY01000002.1 RefSeq pseudogene 309729 310654 . - . ID=gene-AD853_RS21275;Name=AD853_RS21275;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD853_RS21275;pseudo=true NZ_CPUY01000002.1 Protein Homology CDS 309729 310654 . - 0 ID=cds-AD853_RS21275;Parent=gene-AD853_RS21275;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015344209.1;locus_tag=AD853_RS21275;product=IS3 family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_CPUY01000003.1 1 308567 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=633 NZ_CPUY01000003.1 RefSeq region 1 308567 . + . ID=NZ_CPUY01000003.1:1..308567;Dbxref=taxon:633;collection-date=1900/2008;country=South Africa;gbkey=Src;genome=genomic;isolation-source=not known;mol_type=genomic DNA;nat-host=pig;serovar=O:3;strain=IP32544 NZ_CPUY01000003.1 RefSeq gene 366 707 . - . ID=gene-AD853_RS03515;Name=AD853_RS03515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS03515;old_locus_tag=ERS008462_00712 NZ_CPUY01000003.1 Protein Homology CDS 366 707 . - 0 ID=cds-WP_002208752.1;Parent=gene-AD853_RS03515;Dbxref=GenBank:WP_002208752.1;Name=WP_002208752.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304536.1;locus_tag=AD853_RS03515;product=YfiM family lipoprotein;protein_id=WP_002208752.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 769 2121 . - . ID=gene-AD853_RS03520;Name=pssA;gbkey=Gene;gene=pssA;gene_biotype=protein_coding;locus_tag=AD853_RS03520;old_locus_tag=ERS008462_00713 NZ_CPUY01000003.1 Protein Homology CDS 769 2121 . - 0 ID=cds-WP_404975820.1;Parent=gene-AD853_RS03520;Dbxref=GenBank:WP_404975820.1;Name=WP_404975820.1;Ontology_term=GO:0032049,GO:0008444;gbkey=CDS;gene=pssA;go_function=CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity|0008444||IEA;go_process=cardiolipin biosynthetic process|0032049||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208751.1;locus_tag=AD853_RS03520;product=CDP-diacylglycerol--serine O-phosphatidyltransferase;protein_id=WP_404975820.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 2300 4942 . - . ID=gene-AD853_RS03525;Name=AD853_RS03525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS03525;old_locus_tag=ERS008462_00714 NZ_CPUY01000003.1 Protein Homology CDS 2300 4942 . - 0 ID=cds-WP_038825670.1;Parent=gene-AD853_RS03525;Dbxref=GenBank:WP_038825670.1;Name=WP_038825670.1;Ontology_term=GO:0046356,GO:0003985,GO:0005524,GO:0008080,GO:0043758;gbkey=CDS;go_function=acetyl-CoA C-acetyltransferase activity|0003985||IEA,ATP binding|0005524||IEA,N-acetyltransferase activity|0008080||IEA,acetate-CoA ligase (ADP-forming) activity|0043758||IEA;go_process=acetyl-CoA catabolic process|0046356||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005166481.1;locus_tag=AD853_RS03525;product=bifunctional acetate--CoA ligase family protein/GNAT family N-acetyltransferase;protein_id=WP_038825670.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 4985 5734 . - . ID=gene-AD853_RS03530;Name=AD853_RS03530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS03530;old_locus_tag=ERS008462_00715 NZ_CPUY01000003.1 Protein Homology CDS 4985 5734 . - 0 ID=cds-WP_038824703.1;Parent=gene-AD853_RS03530;Dbxref=GenBank:WP_038824703.1;Name=WP_038824703.1;Ontology_term=GO:0006400,GO:0016432;gbkey=CDS;go_function=tRNA-uridine aminocarboxypropyltransferase activity|0016432||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011191816.1;locus_tag=AD853_RS03530;product=tRNA-uridine aminocarboxypropyltransferase;protein_id=WP_038824703.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 5904 6341 . - . ID=gene-AD853_RS03535;Name=trxC;gbkey=Gene;gene=trxC;gene_biotype=protein_coding;locus_tag=AD853_RS03535;old_locus_tag=ERS008462_00716 NZ_CPUY01000003.1 Protein Homology CDS 5904 6341 . - 0 ID=cds-WP_002216643.1;Parent=gene-AD853_RS03535;Dbxref=GenBank:WP_002216643.1;Name=WP_002216643.1;Ontology_term=GO:0045454,GO:0015035;gbkey=CDS;gene=trxC;go_function=protein-disulfide reductase activity|0015035||IEA;go_process=cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002216643.1;locus_tag=AD853_RS03535;product=thioredoxin TrxC;protein_id=WP_002216643.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 6593 7765 . + . ID=gene-AD853_RS03540;Name=AD853_RS03540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS03540;old_locus_tag=ERS008462_00717 NZ_CPUY01000003.1 Protein Homology CDS 6593 7765 . + 0 ID=cds-WP_038824705.1;Parent=gene-AD853_RS03540;Dbxref=GenBank:WP_038824705.1;Name=WP_038824705.1;Ontology_term=GO:0006396,GO:0003723,GO:0008173;gbkey=CDS;go_function=RNA binding|0003723||IEA,RNA methyltransferase activity|0008173||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012229947.1;locus_tag=AD853_RS03540;product=tRNA/rRNA methyltransferase;protein_id=WP_038824705.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 7898 9433 . - . ID=gene-AD853_RS03545;Name=emrB;gbkey=Gene;gene=emrB;gene_biotype=protein_coding;locus_tag=AD853_RS03545;old_locus_tag=ERS008462_00718 NZ_CPUY01000003.1 Protein Homology CDS 7898 9433 . - 0 ID=cds-WP_002208746.1;Parent=gene-AD853_RS03545;Dbxref=GenBank:WP_002208746.1;Name=WP_002208746.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=emrB;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208746.1;locus_tag=AD853_RS03545;product=multidrug efflux MFS transporter permease subunit EmrB;protein_id=WP_002208746.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 9472 10644 . - . ID=gene-AD853_RS03550;Name=emrA;gbkey=Gene;gene=emrA;gene_biotype=protein_coding;locus_tag=AD853_RS03550;old_locus_tag=ERS008462_00719 NZ_CPUY01000003.1 Protein Homology CDS 9472 10644 . - 0 ID=cds-WP_038824706.1;Parent=gene-AD853_RS03550;Dbxref=GenBank:WP_038824706.1;Name=WP_038824706.1;gbkey=CDS;gene=emrA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304533.1;locus_tag=AD853_RS03550;product=multidrug efflux MFS transporter periplasmic adaptor subunit EmrA;protein_id=WP_038824706.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 11028 11540 . - . ID=gene-AD853_RS03555;Name=mprA;gbkey=Gene;gene=mprA;gene_biotype=protein_coding;locus_tag=AD853_RS03555;old_locus_tag=ERS008462_00720 NZ_CPUY01000003.1 Protein Homology CDS 11028 11540 . - 0 ID=cds-WP_002208744.1;Parent=gene-AD853_RS03555;Dbxref=GenBank:WP_002208744.1;Name=WP_002208744.1;gbkey=CDS;gene=mprA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208744.1;locus_tag=AD853_RS03555;product=transcriptional repressor MprA;protein_id=WP_002208744.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 11712 12053 . - . ID=gene-AD853_RS03560;Name=ygaH;gbkey=Gene;gene=ygaH;gene_biotype=protein_coding;locus_tag=AD853_RS03560;old_locus_tag=ERS008462_00721 NZ_CPUY01000003.1 Protein Homology CDS 11712 12053 . - 0 ID=cds-WP_011191819.1;Parent=gene-AD853_RS03560;Dbxref=GenBank:WP_011191819.1;Name=WP_011191819.1;gbkey=CDS;gene=ygaH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208743.1;locus_tag=AD853_RS03560;product=L-valine transporter subunit YgaH;protein_id=WP_011191819.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 12050 12823 . - . ID=gene-AD853_RS03565;Name=AD853_RS03565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS03565;old_locus_tag=ERS008462_00722 NZ_CPUY01000003.1 Protein Homology CDS 12050 12823 . - 0 ID=cds-WP_011191820.1;Parent=gene-AD853_RS03565;Dbxref=GenBank:WP_011191820.1;Name=WP_011191820.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020,GO:1902495;gbkey=CDS;go_component=membrane|0016020||IEA,transmembrane transporter complex|1902495||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004704053.1;locus_tag=AD853_RS03565;product=AzlC family ABC transporter permease;protein_id=WP_011191820.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 12983 14182 . - . ID=gene-AD853_RS03570;Name=AD853_RS03570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS03570;old_locus_tag=ERS008462_00723 NZ_CPUY01000003.1 Protein Homology CDS 12983 14182 . - 0 ID=cds-WP_038824708.1;Parent=gene-AD853_RS03570;Dbxref=GenBank:WP_038824708.1;Name=WP_038824708.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011906396.1;locus_tag=AD853_RS03570;product=MFS transporter;protein_id=WP_038824708.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 14391 14777 . - . ID=gene-AD853_RS03575;Name=hpxZ;gbkey=Gene;gene=hpxZ;gene_biotype=protein_coding;locus_tag=AD853_RS03575;old_locus_tag=ERS008462_00724 NZ_CPUY01000003.1 Protein Homology CDS 14391 14777 . - 0 ID=cds-WP_038824709.1;Parent=gene-AD853_RS03575;Dbxref=GenBank:WP_038824709.1;Name=WP_038824709.1;gbkey=CDS;gene=hpxZ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002264506.1;locus_tag=AD853_RS03575;product=oxalurate catabolism protein HpxZ;protein_id=WP_038824709.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 14839 16236 . - . ID=gene-AD853_RS03580;Name=AD853_RS03580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS03580;old_locus_tag=ERS008462_00725 NZ_CPUY01000003.1 Protein Homology CDS 14839 16236 . - 0 ID=cds-WP_038824711.1;Parent=gene-AD853_RS03580;Dbxref=GenBank:WP_038824711.1;Name=WP_038824711.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208739.1;locus_tag=AD853_RS03580;product=AtzE family amidohydrolase;protein_id=WP_038824711.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 16233 16436 . - . ID=gene-AD853_RS03585;Name=hpxX;gbkey=Gene;gene=hpxX;gene_biotype=protein_coding;locus_tag=AD853_RS03585;old_locus_tag=ERS008462_00726 NZ_CPUY01000003.1 Protein Homology CDS 16233 16436 . - 0 ID=cds-WP_002208738.1;Parent=gene-AD853_RS03585;Dbxref=GenBank:WP_002208738.1;Name=WP_002208738.1;gbkey=CDS;gene=hpxX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304532.1;locus_tag=AD853_RS03585;product=oxalurate catabolism protein HpxX;protein_id=WP_002208738.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 16435 16563 . + . ID=gene-AD853_RS22395;Name=AD853_RS22395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS22395 NZ_CPUY01000003.1 GeneMarkS-2+ CDS 16435 16563 . + 0 ID=cds-WP_002222292.1;Parent=gene-AD853_RS22395;Dbxref=GenBank:WP_002222292.1;Name=WP_002222292.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AD853_RS22395;product=hypothetical protein;protein_id=WP_002222292.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 16746 17579 . + . ID=gene-AD853_RS03590;Name=AD853_RS03590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS03590;old_locus_tag=ERS008462_00727 NZ_CPUY01000003.1 Protein Homology CDS 16746 17579 . + 0 ID=cds-WP_038824712.1;Parent=gene-AD853_RS03590;Dbxref=GenBank:WP_038824712.1;Name=WP_038824712.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208736.1;locus_tag=AD853_RS03590;product=MurR/RpiR family transcriptional regulator;protein_id=WP_038824712.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 17907 18695 . + . ID=gene-AD853_RS03600;Name=AD853_RS03600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS03600;old_locus_tag=ERS008462_00728 NZ_CPUY01000003.1 Protein Homology CDS 17907 18695 . + 0 ID=cds-WP_011191825.1;Parent=gene-AD853_RS03600;Dbxref=GenBank:WP_011191825.1;Name=WP_011191825.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012229946.1;locus_tag=AD853_RS03600;product=transporter substrate-binding domain-containing protein;protein_id=WP_011191825.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 18708 19376 . + . ID=gene-AD853_RS03605;Name=AD853_RS03605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS03605;old_locus_tag=ERS008462_00729 NZ_CPUY01000003.1 Protein Homology CDS 18708 19376 . + 0 ID=cds-WP_002208734.1;Parent=gene-AD853_RS03605;Dbxref=GenBank:WP_002208734.1;Name=WP_002208734.1;Ontology_term=GO:0006865,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208734.1;locus_tag=AD853_RS03605;product=amino acid ABC transporter permease;protein_id=WP_002208734.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 19373 20026 . + . ID=gene-AD853_RS03610;Name=AD853_RS03610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS03610;old_locus_tag=ERS008462_00730 NZ_CPUY01000003.1 Protein Homology CDS 19373 20026 . + 0 ID=cds-WP_011191826.1;Parent=gene-AD853_RS03610;Dbxref=GenBank:WP_011191826.1;Name=WP_011191826.1;Ontology_term=GO:0006865,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208733.1;locus_tag=AD853_RS03610;product=amino acid ABC transporter permease;protein_id=WP_011191826.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 20007 20753 . + . ID=gene-AD853_RS03615;Name=AD853_RS03615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS03615;old_locus_tag=ERS008462_00731 NZ_CPUY01000003.1 Protein Homology CDS 20007 20753 . + 0 ID=cds-WP_038824714.1;Parent=gene-AD853_RS03615;Dbxref=GenBank:WP_038824714.1;Name=WP_038824714.1;Ontology_term=GO:0005524,GO:0015424,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ABC-type amino acid transporter activity|0015424||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208732.1;locus_tag=AD853_RS03615;product=amino acid ABC transporter ATP-binding protein;protein_id=WP_038824714.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 20785 22092 . + . ID=gene-AD853_RS03620;Name=AD853_RS03620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS03620;old_locus_tag=ERS008462_00732 NZ_CPUY01000003.1 Protein Homology CDS 20785 22092 . + 0 ID=cds-WP_038824715.1;Parent=gene-AD853_RS03620;Dbxref=GenBank:WP_038824715.1;Name=WP_038824715.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002228332.1;locus_tag=AD853_RS03620;product=pyridoxal-phosphate-dependent aminotransferase family protein;protein_id=WP_038824715.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 22092 23375 . + . ID=gene-AD853_RS03625;Name=AD853_RS03625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS03625;old_locus_tag=ERS008462_00733 NZ_CPUY01000003.1 Protein Homology CDS 22092 23375 . + 0 ID=cds-WP_038824717.1;Parent=gene-AD853_RS03625;Dbxref=GenBank:WP_038824717.1;Name=WP_038824717.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208729.1;locus_tag=AD853_RS03625;product=allantoate amidohydrolase;protein_id=WP_038824717.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 23476 24246 . - . ID=gene-AD853_RS03630;Name=AD853_RS03630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS03630;old_locus_tag=ERS008462_00734 NZ_CPUY01000003.1 Protein Homology CDS 23476 24246 . - 0 ID=cds-WP_011906395.1;Parent=gene-AD853_RS03630;Dbxref=GenBank:WP_011906395.1;Name=WP_011906395.1;Ontology_term=GO:0008152;gbkey=CDS;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005167478.1;locus_tag=AD853_RS03630;product=amidohydrolase;protein_id=WP_011906395.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 24234 25394 . - . ID=gene-AD853_RS03635;Name=AD853_RS03635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS03635;old_locus_tag=ERS008462_00735 NZ_CPUY01000003.1 Protein Homology CDS 24234 25394 . - 0 ID=cds-WP_038824912.1;Parent=gene-AD853_RS03635;Dbxref=GenBank:WP_038824912.1;Name=WP_038824912.1;Ontology_term=GO:0008483,GO:0016740;gbkey=CDS;go_function=transaminase activity|0008483||IEA,transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105603.1;locus_tag=AD853_RS03635;product=pyridoxal phosphate-dependent aminotransferase;protein_id=WP_038824912.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 25534 26202 . + . ID=gene-AD853_RS03640;Name=AD853_RS03640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS03640;old_locus_tag=ERS008462_00736 NZ_CPUY01000003.1 Protein Homology CDS 25534 26202 . + 0 ID=cds-WP_011191831.1;Parent=gene-AD853_RS03640;Dbxref=GenBank:WP_011191831.1;Name=WP_011191831.1;Ontology_term=GO:0019509,GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;go_process=L-methionine salvage from methylthioadenosine|0019509||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011906393.1;locus_tag=AD853_RS03640;product=methylthioribulose 1-phosphate dehydratase;protein_id=WP_011191831.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 26199 26888 . + . ID=gene-AD853_RS03645;Name=mtnC;gbkey=Gene;gene=mtnC;gene_biotype=protein_coding;locus_tag=AD853_RS03645;old_locus_tag=ERS008462_00737 NZ_CPUY01000003.1 Protein Homology CDS 26199 26888 . + 0 ID=cds-WP_011906392.1;Parent=gene-AD853_RS03645;Dbxref=GenBank:WP_011906392.1;Name=WP_011906392.1;Ontology_term=GO:0019509,GO:0000287,GO:0043874;gbkey=CDS;gene=mtnC;go_function=magnesium ion binding|0000287||IEA,acireductone synthase activity|0043874||IEA;go_process=L-methionine salvage from methylthioadenosine|0019509||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011191832.1;locus_tag=AD853_RS03645;product=acireductone synthase;protein_id=WP_011906392.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 26988 27530 . + . ID=gene-AD853_RS03650;Name=AD853_RS03650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS03650;old_locus_tag=ERS008462_00738 NZ_CPUY01000003.1 Protein Homology CDS 26988 27530 . + 0 ID=cds-WP_011191833.1;Parent=gene-AD853_RS03650;Dbxref=GenBank:WP_011191833.1;Name=WP_011191833.1;Ontology_term=GO:0019509,GO:0005506,GO:0010308,GO:0010309,GO:0016151;gbkey=CDS;go_function=iron ion binding|0005506||IEA,acireductone dioxygenase (Ni2+-requiring) activity|0010308||IEA,acireductone dioxygenase [iron(II)-requiring] activity|0010309||IEA,nickel cation binding|0016151||IEA;go_process=L-methionine salvage from methylthioadenosine|0019509||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007732556.1;locus_tag=AD853_RS03650;product=1%2C2-dihydroxy-3-keto-5-methylthiopentene dioxygenase;protein_id=WP_011191833.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 27563 28603 . - . ID=gene-AD853_RS03655;Name=mtnA;gbkey=Gene;gene=mtnA;gene_biotype=protein_coding;locus_tag=AD853_RS03655;old_locus_tag=ERS008462_00739 NZ_CPUY01000003.1 Protein Homology CDS 27563 28603 . - 0 ID=cds-WP_038825669.1;Parent=gene-AD853_RS03655;Dbxref=GenBank:WP_038825669.1;Name=WP_038825669.1;Ontology_term=GO:0019509,GO:0046523;gbkey=CDS;gene=mtnA;go_function=S-methyl-5-thioribose-1-phosphate isomerase activity|0046523||IEA;go_process=L-methionine salvage from methylthioadenosine|0019509||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011191834.1;locus_tag=AD853_RS03655;product=S-methyl-5-thioribose-1-phosphate isomerase;protein_id=WP_038825669.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 28799 30022 . + . ID=gene-AD853_RS03660;Name=mtnK;gbkey=Gene;gene=mtnK;gene_biotype=protein_coding;locus_tag=AD853_RS03660;old_locus_tag=ERS008462_00740 NZ_CPUY01000003.1 Protein Homology CDS 28799 30022 . + 0 ID=cds-WP_038824914.1;Parent=gene-AD853_RS03660;Dbxref=GenBank:WP_038824914.1;Name=WP_038824914.1;Ontology_term=GO:0009086,GO:0046522;gbkey=CDS;gene=mtnK;go_function=S-methyl-5-thioribose kinase activity|0046522||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011191835.1;locus_tag=AD853_RS03660;product=S-methyl-5-thioribose kinase;protein_id=WP_038824914.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 30863 32653 . + . ID=gene-AD853_RS03665;Name=AD853_RS03665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS03665;old_locus_tag=ERS008462_00741 NZ_CPUY01000003.1 Protein Homology CDS 30863 32653 . + 0 ID=cds-WP_002214693.1;Parent=gene-AD853_RS03665;Dbxref=GenBank:WP_002214693.1;Name=WP_002214693.1;Ontology_term=GO:0006811,GO:0015031,GO:0015288,GO:0046930;gbkey=CDS;go_component=pore complex|0046930||IEA;go_function=porin activity|0015288||IEA;go_process=monoatomic ion transport|0006811||IEA,protein transport|0015031||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002214693.1;locus_tag=AD853_RS03665;product=ShlB/FhaC/HecB family hemolysin secretion/activation protein;protein_id=WP_002214693.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 32694 38864 . + . ID=gene-AD853_RS03670;Name=AD853_RS03670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS03670;old_locus_tag=ERS008462_00742 NZ_CPUY01000003.1 Protein Homology CDS 32694 38864 . + 0 ID=cds-WP_050124567.1;Parent=gene-AD853_RS03670;Dbxref=GenBank:WP_050124567.1;Name=WP_050124567.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011191837.1;locus_tag=AD853_RS03670;product=two-partner secretion domain-containing protein;protein_id=WP_050124567.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 39019 40872 . + . ID=gene-AD853_RS03675;Name=AD853_RS03675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS03675;old_locus_tag=ERS008462_00743 NZ_CPUY01000003.1 Protein Homology CDS 39019 40872 . + 0 ID=cds-WP_038824490.1;Parent=gene-AD853_RS03675;Dbxref=GenBank:WP_038824490.1;Name=WP_038824490.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208722.1;locus_tag=AD853_RS03675;product=hypothetical protein;protein_id=WP_038824490.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 40874 41128 . + . ID=gene-AD853_RS21480;Name=AD853_RS21480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS21480;old_locus_tag=ERS008462_00744 NZ_CPUY01000003.1 GeneMarkS-2+ CDS 40874 41128 . + 0 ID=cds-WP_150352081.1;Parent=gene-AD853_RS21480;Dbxref=GenBank:WP_150352081.1;Name=WP_150352081.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AD853_RS21480;product=hypothetical protein;protein_id=WP_150352081.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 41132 41620 . + . ID=gene-AD853_RS03680;Name=AD853_RS03680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS03680;old_locus_tag=ERS008462_00745 NZ_CPUY01000003.1 Protein Homology CDS 41132 41620 . + 0 ID=cds-WP_150352082.1;Parent=gene-AD853_RS03680;Dbxref=GenBank:WP_150352082.1;Name=WP_150352082.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:NF015301.6;locus_tag=AD853_RS03680;product=PapB/FocB family fimbrial expression transcriptional regulator;protein_id=WP_150352082.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 41792 44239 . - . ID=gene-AD853_RS03685;Name=fadE;gbkey=Gene;gene=fadE;gene_biotype=protein_coding;locus_tag=AD853_RS03685;old_locus_tag=ERS008462_00746 NZ_CPUY01000003.1 Protein Homology CDS 41792 44239 . - 0 ID=cds-WP_024063316.1;Parent=gene-AD853_RS03685;Dbxref=GenBank:WP_024063316.1;Name=WP_024063316.1;Ontology_term=GO:0033539,GO:0003995,GO:0050660;gbkey=CDS;gene=fadE;go_function=acyl-CoA dehydrogenase activity|0003995||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=fatty acid beta-oxidation using acyl-CoA dehydrogenase|0033539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011191839.1;locus_tag=AD853_RS03685;product=acyl-CoA dehydrogenase FadE;protein_id=WP_024063316.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 44479 45060 . + . ID=gene-AD853_RS03690;Name=lpcA;gbkey=Gene;gene=lpcA;gene_biotype=protein_coding;locus_tag=AD853_RS03690;old_locus_tag=ERS008462_00747 NZ_CPUY01000003.1 Protein Homology CDS 44479 45060 . + 0 ID=cds-WP_002208720.1;Parent=gene-AD853_RS03690;Dbxref=GenBank:WP_002208720.1;Name=WP_002208720.1;Ontology_term=GO:1901135,GO:0008968;gbkey=CDS;gene=lpcA;go_function=D-sedoheptulose 7-phosphate isomerase activity|0008968||IEA;go_process=carbohydrate derivative metabolic process|1901135||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010981422.1;locus_tag=AD853_RS03690;product=D-sedoheptulose 7-phosphate isomerase;protein_id=WP_002208720.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 45263 46036 . + . ID=gene-AD853_RS03695;Name=AD853_RS03695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS03695;old_locus_tag=ERS008462_00748 NZ_CPUY01000003.1 Protein Homology CDS 45263 46036 . + 0 ID=cds-WP_002208719.1;Parent=gene-AD853_RS03695;Dbxref=GenBank:WP_002208719.1;Name=WP_002208719.1;Ontology_term=GO:0006541,GO:0016740;gbkey=CDS;go_function=transferase activity|0016740||IEA;go_process=glutamine metabolic process|0006541||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105598.1;locus_tag=AD853_RS03695;product=class II glutamine amidotransferase;protein_id=WP_002208719.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 46001 46741 . - . ID=gene-AD853_RS03700;Name=dpaA;gbkey=Gene;gene=dpaA;gene_biotype=protein_coding;locus_tag=AD853_RS03700;old_locus_tag=ERS008462_00749 NZ_CPUY01000003.1 Protein Homology CDS 46001 46741 . - 0 ID=cds-WP_038824488.1;Parent=gene-AD853_RS03700;Dbxref=GenBank:WP_038824488.1;Name=WP_038824488.1;gbkey=CDS;gene=dpaA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304521.1;locus_tag=AD853_RS03700;product=peptidoglycan meso-diaminopimelic acid protein amidase;protein_id=WP_038824488.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 46956 47135 . - . ID=gene-AD853_RS22005;Name=AD853_RS22005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS22005 NZ_CPUY01000003.1 Protein Homology CDS 46956 47135 . - 0 ID=cds-WP_002214689.1;Parent=gene-AD853_RS22005;Dbxref=GenBank:WP_002214689.1;Name=WP_002214689.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002214689.1;locus_tag=AD853_RS22005;product=hypothetical protein;protein_id=WP_002214689.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 47237 48580 . + . ID=gene-AD853_RS03705;Name=AD853_RS03705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS03705;old_locus_tag=ERS008462_00750 NZ_CPUY01000003.1 Protein Homology CDS 47237 48580 . + 0 ID=cds-WP_002208717.1;Parent=gene-AD853_RS03705;Dbxref=GenBank:WP_002208717.1;Name=WP_002208717.1;Ontology_term=GO:0006814,GO:0016655;gbkey=CDS;go_function=oxidoreductase activity%2C acting on NAD(P)H%2C quinone or similar compound as acceptor|0016655||IEA;go_process=sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019082505.1;locus_tag=AD853_RS03705;product=Na(+)-translocating NADH-quinone reductase subunit A;protein_id=WP_002208717.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 48584 49825 . + . ID=gene-AD853_RS03710;Name=AD853_RS03710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS03710;old_locus_tag=ERS008462_00751 NZ_CPUY01000003.1 Protein Homology CDS 48584 49825 . + 0 ID=cds-WP_002208716.1;Parent=gene-AD853_RS03710;Dbxref=GenBank:WP_002208716.1;Name=WP_002208716.1;Ontology_term=GO:0022904,GO:0055085,GO:0010181,GO:0016655,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=FMN binding|0010181||IEA,oxidoreductase activity%2C acting on NAD(P)H%2C quinone or similar compound as acceptor|0016655||IEA;go_process=respiratory electron transport chain|0022904||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004704034.1;locus_tag=AD853_RS03710;product=NADH:ubiquinone reductase (Na(+)-transporting) subunit B;protein_id=WP_002208716.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 49815 50615 . + . ID=gene-AD853_RS03715;Name=AD853_RS03715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS03715;old_locus_tag=ERS008462_00752 NZ_CPUY01000003.1 Protein Homology CDS 49815 50615 . + 0 ID=cds-WP_011191841.1;Parent=gene-AD853_RS03715;Dbxref=GenBank:WP_011191841.1;Name=WP_011191841.1;Ontology_term=GO:0006814,GO:0016655,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=oxidoreductase activity%2C acting on NAD(P)H%2C quinone or similar compound as acceptor|0016655||IEA;go_process=sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011191841.1;locus_tag=AD853_RS03715;product=Na(+)-translocating NADH-quinone reductase subunit C;protein_id=WP_011191841.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 50608 51237 . + . ID=gene-AD853_RS03720;Name=AD853_RS03720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS03720;old_locus_tag=ERS008462_00753 NZ_CPUY01000003.1 Protein Homology CDS 50608 51237 . + 0 ID=cds-WP_002208714.1;Parent=gene-AD853_RS03720;Dbxref=GenBank:WP_002208714.1;Name=WP_002208714.1;Ontology_term=GO:0016655,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=oxidoreductase activity%2C acting on NAD(P)H%2C quinone or similar compound as acceptor|0016655||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006323797.1;locus_tag=AD853_RS03720;product=NADH:ubiquinone reductase (Na(+)-transporting) subunit D;protein_id=WP_002208714.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 51244 51840 . + . ID=gene-AD853_RS03725;Name=nqrE;gbkey=Gene;gene=nqrE;gene_biotype=protein_coding;locus_tag=AD853_RS03725;old_locus_tag=ERS008462_00754 NZ_CPUY01000003.1 Protein Homology CDS 51244 51840 . + 0 ID=cds-WP_002208713.1;Parent=gene-AD853_RS03725;Dbxref=GenBank:WP_002208713.1;Name=WP_002208713.1;Ontology_term=GO:0006814,GO:0016655;gbkey=CDS;gene=nqrE;go_function=oxidoreductase activity%2C acting on NAD(P)H%2C quinone or similar compound as acceptor|0016655||IEA;go_process=sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225269.1;locus_tag=AD853_RS03725;product=NADH:ubiquinone reductase (Na(+)-transporting) subunit E;protein_id=WP_002208713.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 51856 53079 . + . ID=gene-AD853_RS03730;Name=nqrF;gbkey=Gene;gene=nqrF;gene_biotype=protein_coding;locus_tag=AD853_RS03730;old_locus_tag=ERS008462_00755 NZ_CPUY01000003.1 Protein Homology CDS 51856 53079 . + 0 ID=cds-WP_002208711.1;Parent=gene-AD853_RS03730;Dbxref=GenBank:WP_002208711.1;Name=WP_002208711.1;Ontology_term=GO:0006814,GO:0016655,GO:0051537,GO:0016020;gbkey=CDS;gene=nqrF;go_component=membrane|0016020||IEA;go_function=oxidoreductase activity%2C acting on NAD(P)H%2C quinone or similar compound as acceptor|0016655||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;go_process=sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225270.1;locus_tag=AD853_RS03730;product=NADH:ubiquinone reductase (Na(+)-transporting) subunit F;protein_id=WP_002208711.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 53120 54142 . + . ID=gene-AD853_RS03735;Name=AD853_RS03735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS03735;old_locus_tag=ERS008462_00756 NZ_CPUY01000003.1 Protein Homology CDS 53120 54142 . + 0 ID=cds-WP_072080761.1;Parent=gene-AD853_RS03735;Dbxref=GenBank:WP_072080761.1;Name=WP_072080761.1;Ontology_term=GO:0017013,GO:0016740,GO:0046872,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=transferase activity|0016740||IEA,metal ion binding|0046872||IEA;go_process=protein flavinylation|0017013||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002227821.1;locus_tag=AD853_RS03735;product=FAD:protein FMN transferase;protein_id=WP_072080761.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 54155 54382 . + . ID=gene-AD853_RS03740;Name=nqrM;gbkey=Gene;gene=nqrM;gene_biotype=protein_coding;locus_tag=AD853_RS03740;old_locus_tag=ERS008462_00757 NZ_CPUY01000003.1 Protein Homology CDS 54155 54382 . + 0 ID=cds-WP_002214684.1;Parent=gene-AD853_RS03740;Dbxref=GenBank:WP_002214684.1;Name=WP_002214684.1;gbkey=CDS;gene=nqrM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002214684.1;locus_tag=AD853_RS03740;product=(Na+)-NQR maturation NqrM;protein_id=WP_002214684.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 54627 55559 . - . ID=gene-AD853_RS03745;Name=AD853_RS03745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS03745;old_locus_tag=ERS008462_00758 NZ_CPUY01000003.1 Protein Homology CDS 54627 55559 . - 0 ID=cds-WP_223847746.1;Parent=gene-AD853_RS03745;Dbxref=GenBank:WP_223847746.1;Name=WP_223847746.1;Ontology_term=GO:0006629,GO:0008081;gbkey=CDS;go_function=phosphoric diester hydrolase activity|0008081||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002264514.1;locus_tag=AD853_RS03745;product=glycerophosphodiester phosphodiesterase family protein;protein_id=WP_223847746.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 55930 56988 . + . ID=gene-AD853_RS03750;Name=dinB;gbkey=Gene;gene=dinB;gene_biotype=protein_coding;locus_tag=AD853_RS03750;old_locus_tag=ERS008462_00759 NZ_CPUY01000003.1 Protein Homology CDS 55930 56988 . + 0 ID=cds-WP_011191844.1;Parent=gene-AD853_RS03750;Dbxref=GenBank:WP_011191844.1;Name=WP_011191844.1;Ontology_term=GO:0006281,GO:0003684,GO:0003887;gbkey=CDS;gene=dinB;go_function=damaged DNA binding|0003684||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011191844.1;locus_tag=AD853_RS03750;product=DNA polymerase IV;protein_id=WP_011191844.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 57102 58562 . - . ID=gene-AD853_RS03755;Name=pepD;gbkey=Gene;gene=pepD;gene_biotype=protein_coding;locus_tag=AD853_RS03755;old_locus_tag=ERS008462_00760 NZ_CPUY01000003.1 Protein Homology CDS 57102 58562 . - 0 ID=cds-WP_038830926.1;Parent=gene-AD853_RS03755;Dbxref=GenBank:WP_038830926.1;Name=WP_038830926.1;Ontology_term=GO:0006508,GO:0016787;gbkey=CDS;gene=pepD;go_function=hydrolase activity|0016787||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208707.1;locus_tag=AD853_RS03755;product=beta-Ala-His dipeptidase;protein_id=WP_038830926.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 60437 61348 . + . ID=gene-AD853_RS03765;Name=AD853_RS03765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS03765;old_locus_tag=ERS008462_00761 NZ_CPUY01000003.1 Protein Homology CDS 60437 61348 . + 0 ID=cds-WP_002216044.1;Parent=gene-AD853_RS03765;Dbxref=GenBank:WP_002216044.1;Name=WP_002216044.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002216044.1;locus_tag=AD853_RS03765;product=LysR family transcriptional regulator;protein_id=WP_002216044.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 62033 62491 . + . ID=gene-AD853_RS03770;Name=gpt;gbkey=Gene;gene=gpt;gene_biotype=protein_coding;locus_tag=AD853_RS03770;old_locus_tag=ERS008462_00762 NZ_CPUY01000003.1 Protein Homology CDS 62033 62491 . + 0 ID=cds-WP_002208704.1;Parent=gene-AD853_RS03770;Dbxref=GenBank:WP_002208704.1;Name=WP_002208704.1;Ontology_term=GO:0009116,GO:0000310;gbkey=CDS;gene=gpt;go_function=xanthine phosphoribosyltransferase activity|0000310||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459314.1;locus_tag=AD853_RS03770;product=xanthine phosphoribosyltransferase;protein_id=WP_002208704.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 62618 63865 . + . ID=gene-AD853_RS03775;Name=frsA;gbkey=Gene;gene=frsA;gene_biotype=protein_coding;locus_tag=AD853_RS03775;old_locus_tag=ERS008462_00763 NZ_CPUY01000003.1 Protein Homology CDS 62618 63865 . + 0 ID=cds-WP_038824484.1;Parent=gene-AD853_RS03775;Dbxref=GenBank:WP_038824484.1;Name=WP_038824484.1;Ontology_term=GO:0016788;gbkey=CDS;gene=frsA;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005167532.1;locus_tag=AD853_RS03775;product=esterase FrsA;protein_id=WP_038824484.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 63925 64326 . + . ID=gene-AD853_RS03780;Name=crl;gbkey=Gene;gene=crl;gene_biotype=protein_coding;locus_tag=AD853_RS03780;old_locus_tag=ERS008462_00764 NZ_CPUY01000003.1 Protein Homology CDS 63925 64326 . + 0 ID=cds-WP_002208702.1;Parent=gene-AD853_RS03780;Dbxref=GenBank:WP_002208702.1;Name=WP_002208702.1;Ontology_term=GO:0045893;gbkey=CDS;gene=crl;go_process=positive regulation of DNA-templated transcription|0045893||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011906387.1;locus_tag=AD853_RS03780;product=sigma factor-binding protein Crl;protein_id=WP_002208702.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 64503 65606 . + . ID=gene-AD853_RS03785;Name=proB;gbkey=Gene;gene=proB;gene_biotype=protein_coding;locus_tag=AD853_RS03785;old_locus_tag=ERS008462_00765 NZ_CPUY01000003.1 Protein Homology CDS 64503 65606 . + 0 ID=cds-WP_002208701.1;Parent=gene-AD853_RS03785;Dbxref=GenBank:WP_002208701.1;Name=WP_002208701.1;Ontology_term=GO:0055129,GO:0004349,GO:0005737;gbkey=CDS;gene=proB;go_component=cytoplasm|0005737||IEA;go_function=glutamate 5-kinase activity|0004349||IEA;go_process=L-proline biosynthetic process|0055129||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006321291.1;locus_tag=AD853_RS03785;product=glutamate 5-kinase;protein_id=WP_002208701.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 65616 66875 . + . ID=gene-AD853_RS03790;Name=proA;gbkey=Gene;gene=proA;gene_biotype=protein_coding;locus_tag=AD853_RS03790;old_locus_tag=ERS008462_00766 NZ_CPUY01000003.1 Protein Homology CDS 65616 66875 . + 0 ID=cds-WP_011191846.1;Parent=gene-AD853_RS03790;Dbxref=GenBank:WP_011191846.1;Name=WP_011191846.1;Ontology_term=GO:0055129,GO:0004350;gbkey=CDS;gene=proA;go_function=glutamate-5-semialdehyde dehydrogenase activity|0004350||IEA;go_process=L-proline biosynthetic process|0055129||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011191846.1;locus_tag=AD853_RS03790;product=glutamate-5-semialdehyde dehydrogenase;protein_id=WP_011191846.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 67203 67961 . + . ID=gene-AD853_RS03795;Name=AD853_RS03795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS03795;old_locus_tag=ERS008462_00767 NZ_CPUY01000003.1 Protein Homology CDS 67203 67961 . + 0 ID=cds-WP_011191847.1;Parent=gene-AD853_RS03795;Dbxref=GenBank:WP_011191847.1;Name=WP_011191847.1;Ontology_term=GO:0035438;gbkey=CDS;go_function=cyclic-di-GMP binding|0035438||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208699.1;locus_tag=AD853_RS03795;product=flagellar brake protein;protein_id=WP_011191847.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 68159 68413 . + . ID=gene-AD853_RS03800;Name=AD853_RS03800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS03800;old_locus_tag=ERS008462_00768 NZ_CPUY01000003.1 Protein Homology CDS 68159 68413 . + 0 ID=cds-WP_002208698.1;Parent=gene-AD853_RS03800;Dbxref=GenBank:WP_002208698.1;Name=WP_002208698.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208698.1;locus_tag=AD853_RS03800;product=hypothetical protein;protein_id=WP_002208698.1;transl_table=11 NZ_CPUY01000003.1 RefSeq pseudogene 68617 69180 . + . ID=gene-AD853_RS03805;Name=AD853_RS03805;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD853_RS03805;old_locus_tag=ERS008462_00769;partial=true;pseudo=true;start_range=.,68617 NZ_CPUY01000003.1 Protein Homology CDS 68617 69180 . + 0 ID=cds-AD853_RS03805;Parent=gene-AD853_RS03805;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0008168,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005189252.1;locus_tag=AD853_RS03805;partial=true;product=class I SAM-dependent methyltransferase;pseudo=true;start_range=.,68617;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 69912 70469 . + . ID=gene-AD853_RS03815;Name=AD853_RS03815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS03815;old_locus_tag=ERS008462_00770 NZ_CPUY01000003.1 Protein Homology CDS 69912 70469 . + 0 ID=cds-WP_011191850.1;Parent=gene-AD853_RS03815;Dbxref=GenBank:WP_011191850.1;Name=WP_011191850.1;Ontology_term=GO:0032259,GO:0008168,GO:0008757,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011191850.1;locus_tag=AD853_RS03815;product=class I SAM-dependent methyltransferase;protein_id=WP_011191850.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 70716 71240 . + . ID=gene-AD853_RS03820;Name=aroL;gbkey=Gene;gene=aroL;gene_biotype=protein_coding;locus_tag=AD853_RS03820;old_locus_tag=ERS008462_00771 NZ_CPUY01000003.1 Protein Homology CDS 70716 71240 . + 0 ID=cds-WP_011191851.1;Parent=gene-AD853_RS03820;Dbxref=GenBank:WP_011191851.1;Name=WP_011191851.1;Ontology_term=GO:0009073,GO:0004765;gbkey=CDS;gene=aroL;go_function=shikimate kinase activity|0004765||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208693.1;locus_tag=AD853_RS03820;product=shikimate kinase AroL;protein_id=WP_011191851.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 71694 71981 . + . ID=gene-AD853_RS03830;Name=ppnP;gbkey=Gene;gene=ppnP;gene_biotype=protein_coding;locus_tag=AD853_RS03830;old_locus_tag=ERS008462_00772 NZ_CPUY01000003.1 Protein Homology CDS 71694 71981 . + 0 ID=cds-WP_002208692.1;Parent=gene-AD853_RS03830;Dbxref=GenBank:WP_002208692.1;Name=WP_002208692.1;gbkey=CDS;gene=ppnP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005274892.1;locus_tag=AD853_RS03830;product=pyrimidine/purine nucleoside phosphorylase;protein_id=WP_002208692.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 72210 73121 . - . ID=gene-AD853_RS03835;Name=rdgC;gbkey=Gene;gene=rdgC;gene_biotype=protein_coding;locus_tag=AD853_RS03835;old_locus_tag=ERS008462_00773 NZ_CPUY01000003.1 Protein Homology CDS 72210 73121 . - 0 ID=cds-WP_002208691.1;Parent=gene-AD853_RS03835;Dbxref=GenBank:WP_002208691.1;Name=WP_002208691.1;Ontology_term=GO:0006310;gbkey=CDS;gene=rdgC;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005274890.1;locus_tag=AD853_RS03835;product=recombination-associated protein RdgC;protein_id=WP_002208691.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 73453 74367 . + . ID=gene-AD853_RS03840;Name=mak;gbkey=Gene;gene=mak;gene_biotype=protein_coding;locus_tag=AD853_RS03840;old_locus_tag=ERS008462_00774 NZ_CPUY01000003.1 Protein Homology CDS 73453 74367 . + 0 ID=cds-WP_038824482.1;Parent=gene-AD853_RS03840;Dbxref=GenBank:WP_038824482.1;Name=WP_038824482.1;gbkey=CDS;gene=mak;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004704442.1;locus_tag=AD853_RS03840;product=fructokinase;protein_id=WP_038824482.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 74571 78266 . - . ID=gene-AD853_RS03845;Name=AD853_RS03845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS03845;old_locus_tag=ERS008462_00775 NZ_CPUY01000003.1 Protein Homology CDS 74571 78266 . - 0 ID=cds-WP_050124568.1;Parent=gene-AD853_RS03845;Dbxref=GenBank:WP_050124568.1;Name=WP_050124568.1;Ontology_term=GO:0006302,GO:0016887;gbkey=CDS;go_function=ATP hydrolysis activity|0016887||IEA;go_process=double-strand break repair|0006302||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011191853.1;locus_tag=AD853_RS03845;product=AAA family ATPase;protein_id=WP_050124568.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 78263 79507 . - . ID=gene-AD853_RS03850;Name=sbcD;gbkey=Gene;gene=sbcD;gene_biotype=protein_coding;locus_tag=AD853_RS03850;old_locus_tag=ERS008462_00776 NZ_CPUY01000003.1 Protein Homology CDS 78263 79507 . - 0 ID=cds-WP_038824481.1;Parent=gene-AD853_RS03850;Dbxref=GenBank:WP_038824481.1;Name=WP_038824481.1;Ontology_term=GO:0006260,GO:0006310,GO:0004527;gbkey=CDS;gene=sbcD;go_function=exonuclease activity|0004527||IEA;go_process=DNA replication|0006260||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011191854.1;locus_tag=AD853_RS03850;product=exonuclease subunit SbcD;protein_id=WP_038824481.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 79775 80464 . + . ID=gene-AD853_RS03860;Name=phoB;gbkey=Gene;gene=phoB;gene_biotype=protein_coding;locus_tag=AD853_RS03860;old_locus_tag=ERS008462_00777 NZ_CPUY01000003.1 Protein Homology CDS 79775 80464 . + 0 ID=cds-WP_002208685.1;Parent=gene-AD853_RS03860;Dbxref=GenBank:WP_002208685.1;Name=WP_002208685.1;gbkey=CDS;gene=phoB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000113934.1;locus_tag=AD853_RS03860;product=phosphate response regulator transcription factor PhoB;protein_id=WP_002208685.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 80489 81805 . + . ID=gene-AD853_RS03865;Name=phoR;gbkey=Gene;gene=phoR;gene_biotype=protein_coding;locus_tag=AD853_RS03865;old_locus_tag=ERS008462_00778 NZ_CPUY01000003.1 Protein Homology CDS 80489 81805 . + 0 ID=cds-WP_002208684.1;Parent=gene-AD853_RS03865;Dbxref=GenBank:WP_002208684.1;Name=WP_002208684.1;Ontology_term=GO:0000160,GO:0006355,GO:0016310,GO:0000155,GO:0004721,GO:0016020;gbkey=CDS;gene=phoR;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,phosphoprotein phosphatase activity|0004721||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019082524.1;locus_tag=AD853_RS03865;product=phosphate regulon sensor histidine kinase PhoR;protein_id=WP_002208684.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 81827 82891 . + . ID=gene-AD853_RS03870;Name=AD853_RS03870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS03870;old_locus_tag=ERS008462_00779 NZ_CPUY01000003.1 Protein Homology CDS 81827 82891 . + 0 ID=cds-WP_038824480.1;Parent=gene-AD853_RS03870;Dbxref=GenBank:WP_038824480.1;Name=WP_038824480.1;Ontology_term=GO:0006817,GO:0022857,GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=transmembrane transporter activity|0022857||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=phosphate ion transport|0006817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011191855.1;locus_tag=AD853_RS03870;product=PstS family phosphate ABC transporter substrate-binding protein;protein_id=WP_038824480.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 83365 84684 . + . ID=gene-AD853_RS03875;Name=brnQ;gbkey=Gene;gene=brnQ;gene_biotype=protein_coding;locus_tag=AD853_RS03875;old_locus_tag=ERS008462_00780 NZ_CPUY01000003.1 Protein Homology CDS 83365 84684 . + 0 ID=cds-WP_038824479.1;Parent=gene-AD853_RS03875;Dbxref=GenBank:WP_038824479.1;Name=WP_038824479.1;Ontology_term=GO:0015803,GO:0015658,GO:0016020;gbkey=CDS;gene=brnQ;go_component=membrane|0016020||IEA;go_function=branched-chain amino acid transmembrane transporter activity|0015658||IEA;go_process=branched-chain amino acid transport|0015803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105586.1;locus_tag=AD853_RS03875;product=branched-chain amino acid transport system II carrier protein;protein_id=WP_038824479.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 84760 86151 . + . ID=gene-AD853_RS03880;Name=proY;gbkey=Gene;gene=proY;gene_biotype=protein_coding;locus_tag=AD853_RS03880;old_locus_tag=ERS008462_00781 NZ_CPUY01000003.1 Protein Homology CDS 84760 86151 . + 0 ID=cds-WP_002223269.1;Parent=gene-AD853_RS03880;Dbxref=GenBank:WP_002223269.1;Name=WP_002223269.1;Ontology_term=GO:0006865,GO:0055085,GO:0016020;gbkey=CDS;gene=proY;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011191856.1;locus_tag=AD853_RS03880;product=proline-specific permease ProY;protein_id=WP_002223269.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 86746 88575 . + . ID=gene-AD853_RS03885;Name=malZ;gbkey=Gene;gene=malZ;gene_biotype=protein_coding;locus_tag=AD853_RS03885;old_locus_tag=ERS008462_00782 NZ_CPUY01000003.1 Protein Homology CDS 86746 88575 . + 0 ID=cds-WP_038824477.1;Parent=gene-AD853_RS03885;Dbxref=GenBank:WP_038824477.1;Name=WP_038824477.1;Ontology_term=GO:0005975,GO:0004558;gbkey=CDS;gene=malZ;go_function=alpha-1%2C4-glucosidase activity|0004558||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105584.1;locus_tag=AD853_RS03885;product=maltodextrin glucosidase;protein_id=WP_038824477.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 88572 88754 . - . ID=gene-AD853_RS21740;Name=AD853_RS21740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS21740 NZ_CPUY01000003.1 Protein Homology CDS 88572 88754 . - 0 ID=cds-WP_071990071.1;Parent=gene-AD853_RS21740;Dbxref=GenBank:WP_071990071.1;Name=WP_071990071.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002222306.1;locus_tag=AD853_RS21740;product=hypothetical protein;protein_id=WP_071990071.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 88730 89410 . + . ID=gene-AD853_RS03890;Name=AD853_RS03890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS03890;old_locus_tag=ERS008462_00783 NZ_CPUY01000003.1 Protein Homology CDS 88730 89410 . + 0 ID=cds-WP_032466143.1;Parent=gene-AD853_RS03890;Dbxref=GenBank:WP_032466143.1;Name=WP_032466143.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105583.1;locus_tag=AD853_RS03890;product=SDR family oxidoreductase;protein_id=WP_032466143.1;transl_table=11 NZ_CPUY01000003.1 RefSeq pseudogene 89618 91381 . - . ID=gene-AD853_RS03895;Name=ggt;gbkey=Gene;gene=ggt;gene_biotype=pseudogene;locus_tag=AD853_RS03895;old_locus_tag=ERS008462_00784;pseudo=true NZ_CPUY01000003.1 Protein Homology CDS 89618 91381 . - 0 ID=cds-AD853_RS03895;Parent=gene-AD853_RS03895;Note=frameshifted;Ontology_term=GO:0006750,GO:0006751,GO:0036374;gbkey=CDS;gene=ggt;go_function=glutathione hydrolase activity|0036374||IEA;go_process=glutathione biosynthetic process|0006750||IEA,glutathione catabolic process|0006751||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013811722.1;locus_tag=AD853_RS03895;product=gamma-glutamyltransferase;pseudo=true;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 91771 92373 . - . ID=gene-AD853_RS03910;Name=AD853_RS03910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS03910;old_locus_tag=ERS008462_00787 NZ_CPUY01000003.1 Protein Homology CDS 91771 92373 . - 0 ID=cds-WP_002208675.1;Parent=gene-AD853_RS03910;Dbxref=GenBank:WP_002208675.1;Name=WP_002208675.1;Ontology_term=GO:0051920;gbkey=CDS;go_function=peroxiredoxin activity|0051920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005160596.1;locus_tag=AD853_RS03910;product=peroxiredoxin C;protein_id=WP_002208675.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 92652 93224 . - . ID=gene-AD853_RS03915;Name=AD853_RS03915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS03915;old_locus_tag=ERS008462_00788 NZ_CPUY01000003.1 Protein Homology CDS 92652 93224 . - 0 ID=cds-WP_038824474.1;Parent=gene-AD853_RS03915;Dbxref=GenBank:WP_038824474.1;Name=WP_038824474.1;Ontology_term=GO:0006633,GO:0008770;gbkey=CDS;go_function=[acyl-carrier-protein] phosphodiesterase activity|0008770||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002216927.1;locus_tag=AD853_RS03915;product=ACP phosphodiesterase;protein_id=WP_038824474.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 93427 94497 . + . ID=gene-AD853_RS03920;Name=queA;gbkey=Gene;gene=queA;gene_biotype=protein_coding;locus_tag=AD853_RS03920;old_locus_tag=ERS008462_00789 NZ_CPUY01000003.1 Protein Homology CDS 93427 94497 . + 0 ID=cds-WP_002208673.1;Parent=gene-AD853_RS03920;Dbxref=GenBank:WP_002208673.1;Name=WP_002208673.1;Ontology_term=GO:0006400,GO:0008616,GO:0051075,GO:0005737;gbkey=CDS;gene=queA;go_component=cytoplasm|0005737||IEA;go_function=S-adenosylmethionine:tRNA ribosyltransferase-isomerase activity|0051075||IEA;go_process=tRNA modification|0006400||IEA,tRNA queuosine(34) biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304512.1;locus_tag=AD853_RS03920;product=tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA;protein_id=WP_002208673.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 94590 95714 . + . ID=gene-AD853_RS03925;Name=tgt;gbkey=Gene;gene=tgt;gene_biotype=protein_coding;locus_tag=AD853_RS03925;old_locus_tag=ERS008462_00790 NZ_CPUY01000003.1 Protein Homology CDS 94590 95714 . + 0 ID=cds-WP_038824473.1;Parent=gene-AD853_RS03925;Dbxref=GenBank:WP_038824473.1;Name=WP_038824473.1;Ontology_term=GO:0006400,GO:0008479,GO:0005737;gbkey=CDS;gene=tgt;go_component=cytoplasm|0005737||IEA;go_function=tRNA-guanosine(34) queuine transglycosylase activity|0008479||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004873475.1;locus_tag=AD853_RS03925;product=tRNA guanosine(34) transglycosylase Tgt;protein_id=WP_038824473.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 95826 96161 . + . ID=gene-AD853_RS03930;Name=yajC;gbkey=Gene;gene=yajC;gene_biotype=protein_coding;locus_tag=AD853_RS03930;old_locus_tag=ERS008462_00791 NZ_CPUY01000003.1 Protein Homology CDS 95826 96161 . + 0 ID=cds-WP_002208671.1;Parent=gene-AD853_RS03930;Dbxref=GenBank:WP_002208671.1;Name=WP_002208671.1;Ontology_term=GO:0009306,GO:0015450,GO:0005886;gbkey=CDS;gene=yajC;go_component=plasma membrane|0005886||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000007628.1;locus_tag=AD853_RS03930;product=preprotein translocase subunit YajC;protein_id=WP_002208671.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 96189 98036 . + . ID=gene-AD853_RS03935;Name=secD;gbkey=Gene;gene=secD;gene_biotype=protein_coding;locus_tag=AD853_RS03935;old_locus_tag=ERS008462_00792 NZ_CPUY01000003.1 Protein Homology CDS 96189 98036 . + 0 ID=cds-WP_002208670.1;Parent=gene-AD853_RS03935;Dbxref=GenBank:WP_002208670.1;Name=WP_002208670.1;Ontology_term=GO:0006886,GO:0043952,GO:0015450,GO:0031522;gbkey=CDS;gene=secD;go_component=cell envelope Sec protein transport complex|0031522||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=intracellular protein transport|0006886||IEA,protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005125127.1;locus_tag=AD853_RS03935;product=protein translocase subunit SecD;protein_id=WP_002208670.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 98047 99015 . + . ID=gene-AD853_RS03940;Name=secF;gbkey=Gene;gene=secF;gene_biotype=protein_coding;locus_tag=AD853_RS03940;old_locus_tag=ERS008462_00793 NZ_CPUY01000003.1 Protein Homology CDS 98047 99015 . + 0 ID=cds-WP_002208669.1;Parent=gene-AD853_RS03940;Dbxref=GenBank:WP_002208669.1;Name=WP_002208669.1;Ontology_term=GO:0006886,GO:0043952,GO:0015450,GO:0031522;gbkey=CDS;gene=secF;go_component=cell envelope Sec protein transport complex|0031522||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=intracellular protein transport|0006886||IEA,protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013649437.1;locus_tag=AD853_RS03940;product=protein translocase subunit SecF;protein_id=WP_002208669.1;transl_table=11 NZ_CPUY01000003.1 RefSeq pseudogene 99267 99963 . + . ID=gene-AD853_RS03945;Name=AD853_RS03945;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD853_RS03945;pseudo=true NZ_CPUY01000003.1 Protein Homology CDS 99267 99963 . + 0 ID=cds-AD853_RS03945;Parent=gene-AD853_RS03945;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002217139.1;locus_tag=AD853_RS03945;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 99996 100589 . + . ID=gene-AD853_RS03950;Name=AD853_RS03950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS03950 NZ_CPUY01000003.1 Protein Homology CDS 99996 100589 . + 0 ID=cds-WP_002217141.1;Parent=gene-AD853_RS03950;Dbxref=GenBank:WP_002217141.1;Name=WP_002217141.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002217141.1;locus_tag=AD853_RS03950;product=hypothetical protein;protein_id=WP_002217141.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 100660 101109 . + . ID=gene-AD853_RS03955;Name=nrdR;gbkey=Gene;gene=nrdR;gene_biotype=protein_coding;locus_tag=AD853_RS03955;old_locus_tag=ERS008462_00795 NZ_CPUY01000003.1 Protein Homology CDS 100660 101109 . + 0 ID=cds-WP_002208668.1;Parent=gene-AD853_RS03955;Dbxref=GenBank:WP_002208668.1;Name=WP_002208668.1;Ontology_term=GO:0006355,GO:0008270,GO:0140110;gbkey=CDS;gene=nrdR;go_function=zinc ion binding|0008270||IEA,transcription regulator activity|0140110||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017458860.1;locus_tag=AD853_RS03955;product=transcriptional regulator NrdR;protein_id=WP_002208668.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 101259 102368 . + . ID=gene-AD853_RS03960;Name=ribD;gbkey=Gene;gene=ribD;gene_biotype=protein_coding;locus_tag=AD853_RS03960;old_locus_tag=ERS008462_00796 NZ_CPUY01000003.1 Protein Homology CDS 101259 102368 . + 0 ID=cds-WP_002208667.1;Parent=gene-AD853_RS03960;Dbxref=GenBank:WP_002208667.1;Name=WP_002208667.1;Ontology_term=GO:0008270,GO:0008703,GO:0008835,GO:0050661;gbkey=CDS;gene=ribD;go_function=zinc ion binding|0008270||IEA,5-amino-6-(5-phosphoribosylamino)uracil reductase activity|0008703||IEA,diaminohydroxyphosphoribosylaminopyrimidine deaminase activity|0008835||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016678527.1;locus_tag=AD853_RS03960;product=bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD;protein_id=WP_002208667.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 102504 102974 . + . ID=gene-AD853_RS03965;Name=ribH;gbkey=Gene;gene=ribH;gene_biotype=protein_coding;locus_tag=AD853_RS03965;old_locus_tag=ERS008462_00797 NZ_CPUY01000003.1 Protein Homology CDS 102504 102974 . + 0 ID=cds-WP_002208666.1;Parent=gene-AD853_RS03965;Dbxref=GenBank:WP_002208666.1;Name=WP_002208666.1;Ontology_term=GO:0000906,GO:0009349;gbkey=CDS;gene=ribH;go_component=riboflavin synthase complex|0009349||IEA;go_function=6%2C7-dimethyl-8-ribityllumazine synthase activity|0000906||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005182120.1;locus_tag=AD853_RS03965;product=6%2C7-dimethyl-8-ribityllumazine synthase;protein_id=WP_002208666.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 102995 103411 . + . ID=gene-AD853_RS03970;Name=nusB;gbkey=Gene;gene=nusB;gene_biotype=protein_coding;locus_tag=AD853_RS03970;old_locus_tag=ERS008462_00798 NZ_CPUY01000003.1 Protein Homology CDS 102995 103411 . + 0 ID=cds-WP_002208665.1;Parent=gene-AD853_RS03970;Dbxref=GenBank:WP_002208665.1;Name=WP_002208665.1;Ontology_term=GO:0006353;gbkey=CDS;gene=nusB;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004393185.1;locus_tag=AD853_RS03970;product=transcription antitermination factor NusB;protein_id=WP_002208665.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 103652 104641 . + . ID=gene-AD853_RS03975;Name=thiL;gbkey=Gene;gene=thiL;gene_biotype=protein_coding;locus_tag=AD853_RS03975;old_locus_tag=ERS008462_00799 NZ_CPUY01000003.1 Protein Homology CDS 103652 104641 . + 0 ID=cds-WP_011906382.1;Parent=gene-AD853_RS03975;Dbxref=GenBank:WP_011906382.1;Name=WP_011906382.1;Ontology_term=GO:0009228,GO:0009030;gbkey=CDS;gene=thiL;go_function=thiamine-phosphate kinase activity|0009030||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208664.1;locus_tag=AD853_RS03975;product=thiamine-phosphate kinase;protein_id=WP_011906382.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 104634 105119 . + . ID=gene-AD853_RS03980;Name=pgpA;gbkey=Gene;gene=pgpA;gene_biotype=protein_coding;locus_tag=AD853_RS03980;old_locus_tag=ERS008462_00800 NZ_CPUY01000003.1 Protein Homology CDS 104634 105119 . + 0 ID=cds-WP_002208663.1;Parent=gene-AD853_RS03980;Dbxref=GenBank:WP_002208663.1;Name=WP_002208663.1;Ontology_term=GO:0006629,GO:0008962;gbkey=CDS;gene=pgpA;go_function=phosphatidylglycerophosphatase activity|0008962||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208663.1;locus_tag=AD853_RS03980;product=phosphatidylglycerophosphatase A;protein_id=WP_002208663.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 105260 107119 . - . ID=gene-AD853_RS03985;Name=dxs;gbkey=Gene;gene=dxs;gene_biotype=protein_coding;locus_tag=AD853_RS03985;old_locus_tag=ERS008462_00801 NZ_CPUY01000003.1 Protein Homology CDS 105260 107119 . - 0 ID=cds-WP_011191862.1;Parent=gene-AD853_RS03985;Dbxref=GenBank:WP_011191862.1;Name=WP_011191862.1;Ontology_term=GO:0008615,GO:0009228,GO:0009240,GO:0008661,GO:0005737;gbkey=CDS;gene=dxs;go_component=cytoplasm|0005737||IEA;go_function=1-deoxy-D-xylulose-5-phosphate synthase activity|0008661||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA,thiamine biosynthetic process|0009228||IEA,isopentenyl diphosphate biosynthetic process|0009240||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005163551.1;locus_tag=AD853_RS03985;product=1-deoxy-D-xylulose-5-phosphate synthase;protein_id=WP_011191862.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 107275 108195 . - . ID=gene-AD853_RS03990;Name=ispA;gbkey=Gene;gene=ispA;gene_biotype=protein_coding;locus_tag=AD853_RS03990;old_locus_tag=ERS008462_00802 NZ_CPUY01000003.1 Protein Homology CDS 107275 108195 . - 0 ID=cds-WP_011191863.1;Parent=gene-AD853_RS03990;Dbxref=GenBank:WP_011191863.1;Name=WP_011191863.1;Ontology_term=GO:0008299;gbkey=CDS;gene=ispA;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208661.1;locus_tag=AD853_RS03990;product=(2E%2C6E)-farnesyl diphosphate synthase;protein_id=WP_011191863.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 108200 108454 . - . ID=gene-AD853_RS03995;Name=xseB;gbkey=Gene;gene=xseB;gene_biotype=protein_coding;locus_tag=AD853_RS03995;old_locus_tag=ERS008462_00803 NZ_CPUY01000003.1 Protein Homology CDS 108200 108454 . - 0 ID=cds-WP_002208660.1;Parent=gene-AD853_RS03995;Dbxref=GenBank:WP_002208660.1;Name=WP_002208660.1;gbkey=CDS;gene=xseB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304509.1;locus_tag=AD853_RS03995;product=exodeoxyribonuclease VII small subunit;protein_id=WP_002208660.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 108804 110255 . + . ID=gene-AD853_RS04005;Name=thiI;gbkey=Gene;gene=thiI;gene_biotype=protein_coding;locus_tag=AD853_RS04005;old_locus_tag=ERS008462_00804 NZ_CPUY01000003.1 Protein Homology CDS 108804 110255 . + 0 ID=cds-WP_002208658.1;Parent=gene-AD853_RS04005;Dbxref=GenBank:WP_002208658.1;Name=WP_002208658.1;Ontology_term=GO:0006400,GO:0009228,GO:0140741;gbkey=CDS;gene=thiI;go_function=tRNA-uracil-4 sulfurtransferase activity|0140741||IEA;go_process=tRNA modification|0006400||IEA,thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225415.1;locus_tag=AD853_RS04005;product=tRNA uracil 4-sulfurtransferase ThiI;protein_id=WP_002208658.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 110323 110913 . - . ID=gene-AD853_RS04010;Name=yajL;gbkey=Gene;gene=yajL;gene_biotype=protein_coding;locus_tag=AD853_RS04010;old_locus_tag=ERS008462_00805 NZ_CPUY01000003.1 Protein Homology CDS 110323 110913 . - 0 ID=cds-WP_002208657.1;Parent=gene-AD853_RS04010;Dbxref=GenBank:WP_002208657.1;Name=WP_002208657.1;gbkey=CDS;gene=yajL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006323929.1;locus_tag=AD853_RS04010;product=protein deglycase YajL;protein_id=WP_002208657.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 110876 111787 . - . ID=gene-AD853_RS04015;Name=panE;gbkey=Gene;gene=panE;gene_biotype=protein_coding;locus_tag=AD853_RS04015;old_locus_tag=ERS008462_00806 NZ_CPUY01000003.1 Protein Homology CDS 110876 111787 . - 0 ID=cds-WP_038824472.1;Parent=gene-AD853_RS04015;Dbxref=GenBank:WP_038824472.1;Name=WP_038824472.1;Ontology_term=GO:0015940,GO:0008677;gbkey=CDS;gene=panE;go_function=2-dehydropantoate 2-reductase activity|0008677||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208656.1;locus_tag=AD853_RS04015;product=2-dehydropantoate 2-reductase;protein_id=WP_038824472.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 112020 112511 . + . ID=gene-AD853_RS04020;Name=AD853_RS04020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS04020;old_locus_tag=ERS008462_00807 NZ_CPUY01000003.1 Protein Homology CDS 112020 112511 . + 0 ID=cds-WP_002208655.1;Parent=gene-AD853_RS04020;Dbxref=GenBank:WP_002208655.1;Name=WP_002208655.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019082537.1;locus_tag=AD853_RS04020;product=YajQ family cyclic di-GMP-binding protein;protein_id=WP_002208655.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 112635 113999 . - . ID=gene-AD853_RS04025;Name=AD853_RS04025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS04025;old_locus_tag=ERS008462_00808 NZ_CPUY01000003.1 Protein Homology CDS 112635 113999 . - 0 ID=cds-WP_002216717.1;Parent=gene-AD853_RS04025;Dbxref=GenBank:WP_002216717.1;Name=WP_002216717.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002216717.1;locus_tag=AD853_RS04025;product=MFS transporter;protein_id=WP_002216717.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 114497 115384 . - . ID=gene-AD853_RS04030;Name=cyoE;gbkey=Gene;gene=cyoE;gene_biotype=protein_coding;locus_tag=AD853_RS04030;old_locus_tag=ERS008462_00809 NZ_CPUY01000003.1 Protein Homology CDS 114497 115384 . - 0 ID=cds-WP_002208653.1;Parent=gene-AD853_RS04030;Dbxref=GenBank:WP_002208653.1;Name=WP_002208653.1;Ontology_term=GO:0048034,GO:0008495,GO:0016020;gbkey=CDS;gene=cyoE;go_component=membrane|0016020||IEA;go_function=protoheme IX farnesyltransferase activity|0008495||IEA;go_process=heme O biosynthetic process|0048034||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208653.1;locus_tag=AD853_RS04030;product=heme o synthase;protein_id=WP_002208653.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 115398 115730 . - . ID=gene-AD853_RS04035;Name=AD853_RS04035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS04035;old_locus_tag=ERS008462_00810 NZ_CPUY01000003.1 Protein Homology CDS 115398 115730 . - 0 ID=cds-WP_002208652.1;Parent=gene-AD853_RS04035;Dbxref=GenBank:WP_002208652.1;Name=WP_002208652.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208652.1;locus_tag=AD853_RS04035;product=cytochrome o ubiquinol oxidase subunit IV;protein_id=WP_002208652.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 115730 116344 . - . ID=gene-AD853_RS04040;Name=AD853_RS04040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS04040;old_locus_tag=ERS008462_00811 NZ_CPUY01000003.1 Protein Homology CDS 115730 116344 . - 0 ID=cds-WP_038824469.1;Parent=gene-AD853_RS04040;Dbxref=GenBank:WP_038824469.1;Name=WP_038824469.1;Ontology_term=GO:0022904,GO:0004129;gbkey=CDS;go_function=cytochrome-c oxidase activity|0004129||IEA;go_process=respiratory electron transport chain|0022904||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208651.1;locus_tag=AD853_RS04040;product=cytochrome o ubiquinol oxidase subunit III;protein_id=WP_038824469.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 116334 118325 . - . ID=gene-AD853_RS04045;Name=cyoB;gbkey=Gene;gene=cyoB;gene_biotype=protein_coding;locus_tag=AD853_RS04045;old_locus_tag=ERS008462_00812 NZ_CPUY01000003.1 Protein Homology CDS 116334 118325 . - 0 ID=cds-WP_002208650.1;Parent=gene-AD853_RS04045;Dbxref=GenBank:WP_002208650.1;Name=WP_002208650.1;Ontology_term=GO:0004129;gbkey=CDS;gene=cyoB;go_function=cytochrome-c oxidase activity|0004129||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308512.1;locus_tag=AD853_RS04045;product=cytochrome o ubiquinol oxidase subunit I;protein_id=WP_002208650.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 118330 119286 . - . ID=gene-AD853_RS04050;Name=cyoA;gbkey=Gene;gene=cyoA;gene_biotype=protein_coding;locus_tag=AD853_RS04050;old_locus_tag=ERS008462_00813 NZ_CPUY01000003.1 Protein Homology CDS 118330 119286 . - 0 ID=cds-WP_002208649.1;Parent=gene-AD853_RS04050;Dbxref=GenBank:WP_002208649.1;Name=WP_002208649.1;Ontology_term=GO:0022900,GO:0004129;gbkey=CDS;gene=cyoA;go_function=cytochrome-c oxidase activity|0004129||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005167626.1;locus_tag=AD853_RS04050;product=cytochrome o ubiquinol oxidase subunit II;protein_id=WP_002208649.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 119656 120423 . - . ID=gene-AD853_RS04055;Name=AD853_RS04055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS04055;old_locus_tag=ERS008462_00814 NZ_CPUY01000003.1 Protein Homology CDS 119656 120423 . - 0 ID=cds-WP_002208648.1;Parent=gene-AD853_RS04055;Dbxref=GenBank:WP_002208648.1;Name=WP_002208648.1;Ontology_term=GO:0015858,GO:0015471,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=nucleoside-specific channel forming porin activity|0015471||IEA;go_process=nucleoside transport|0015858||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208648.1;locus_tag=AD853_RS04055;product=nucleoside-specific channel-forming Tsx family protein;protein_id=WP_002208648.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 120715 122193 . - . ID=gene-AD853_RS04060;Name=ampG;gbkey=Gene;gene=ampG;gene_biotype=protein_coding;locus_tag=AD853_RS04060;old_locus_tag=ERS008462_00815 NZ_CPUY01000003.1 Protein Homology CDS 120715 122193 . - 0 ID=cds-WP_038824468.1;Parent=gene-AD853_RS04060;Dbxref=GenBank:WP_038824468.1;Name=WP_038824468.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=ampG;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011906380.1;locus_tag=AD853_RS04060;product=muropeptide MFS transporter AmpG;protein_id=WP_038824468.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 122310 122888 . - . ID=gene-AD853_RS04065;Name=AD853_RS04065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS04065;old_locus_tag=ERS008462_00816 NZ_CPUY01000003.1 Protein Homology CDS 122310 122888 . - 0 ID=cds-WP_002208646.1;Parent=gene-AD853_RS04065;Dbxref=GenBank:WP_002208646.1;Name=WP_002208646.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208646.1;locus_tag=AD853_RS04065;product=lipoprotein;protein_id=WP_002208646.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 123237 123557 . + . ID=gene-AD853_RS04070;Name=bolA;gbkey=Gene;gene=bolA;gene_biotype=protein_coding;locus_tag=AD853_RS04070;old_locus_tag=ERS008462_00817 NZ_CPUY01000003.1 Protein Homology CDS 123237 123557 . + 0 ID=cds-WP_002208644.1;Parent=gene-AD853_RS04070;Dbxref=GenBank:WP_002208644.1;Name=WP_002208644.1;gbkey=CDS;gene=bolA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208644.1;locus_tag=AD853_RS04070;product=transcriptional regulator BolA;protein_id=WP_002208644.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 123974 125278 . + . ID=gene-AD853_RS04080;Name=tig;gbkey=Gene;gene=tig;gene_biotype=protein_coding;locus_tag=AD853_RS04080;old_locus_tag=ERS008462_00819 NZ_CPUY01000003.1 Protein Homology CDS 123974 125278 . + 0 ID=cds-WP_038824467.1;Parent=gene-AD853_RS04080;Dbxref=GenBank:WP_038824467.1;Name=WP_038824467.1;Ontology_term=GO:0015031,GO:0051083,GO:0003755,GO:0051082,GO:0005854;gbkey=CDS;gene=tig;go_component=nascent polypeptide-associated complex|0005854||IEA;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA,unfolded protein binding|0051082||IEA;go_process=protein transport|0015031||IEA,'de novo' cotranslational protein folding|0051083||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004703366.1;locus_tag=AD853_RS04080;product=trigger factor;protein_id=WP_038824467.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 125740 126363 . + . ID=gene-AD853_RS04085;Name=clpP;gbkey=Gene;gene=clpP;gene_biotype=protein_coding;locus_tag=AD853_RS04085;old_locus_tag=ERS008462_00820 NZ_CPUY01000003.1 Protein Homology CDS 125740 126363 . + 0 ID=cds-WP_002208642.1;Parent=gene-AD853_RS04085;Dbxref=GenBank:WP_002208642.1;Name=WP_002208642.1;Ontology_term=GO:0006508,GO:0004176,GO:0004252,GO:0009368;gbkey=CDS;gene=clpP;go_component=endopeptidase Clp complex|0009368||IEA;go_function=ATP-dependent peptidase activity|0004176||IEA,serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308518.1;locus_tag=AD853_RS04085;product=ATP-dependent Clp endopeptidase proteolytic subunit ClpP;protein_id=WP_002208642.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 126569 127840 . + . ID=gene-AD853_RS04090;Name=clpX;gbkey=Gene;gene=clpX;gene_biotype=protein_coding;locus_tag=AD853_RS04090;old_locus_tag=ERS008462_00821 NZ_CPUY01000003.1 Protein Homology CDS 126569 127840 . + 0 ID=cds-WP_002208641.1;Parent=gene-AD853_RS04090;Dbxref=GenBank:WP_002208641.1;Name=WP_002208641.1;Ontology_term=GO:0005524,GO:0051082,GO:0140662,GO:0009368;gbkey=CDS;gene=clpX;go_component=endopeptidase Clp complex|0009368||IEA;go_function=ATP binding|0005524||IEA,unfolded protein binding|0051082||IEA,ATP-dependent protein folding chaperone|0140662||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000130313.1;locus_tag=AD853_RS04090;product=ATP-dependent protease ATP-binding subunit ClpX;protein_id=WP_002208641.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 128035 130389 . + . ID=gene-AD853_RS04095;Name=lon;gbkey=Gene;gene=lon;gene_biotype=protein_coding;locus_tag=AD853_RS04095;old_locus_tag=ERS008462_00823 NZ_CPUY01000003.1 Protein Homology CDS 128035 130389 . + 0 ID=cds-WP_002208640.1;Parent=gene-AD853_RS04095;Dbxref=GenBank:WP_002208640.1;Name=WP_002208640.1;Ontology_term=GO:0006508,GO:0004176,GO:0004252,GO:0016887,GO:0043565;gbkey=CDS;gene=lon;go_function=ATP-dependent peptidase activity|0004176||IEA,serine-type endopeptidase activity|0004252||IEA,ATP hydrolysis activity|0016887||IEA,sequence-specific DNA binding|0043565||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208640.1;locus_tag=AD853_RS04095;product=endopeptidase La;protein_id=WP_002208640.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 130607 130879 . + . ID=gene-AD853_RS04100;Name=hupB;gbkey=Gene;gene=hupB;gene_biotype=protein_coding;locus_tag=AD853_RS04100;old_locus_tag=ERS008462_00824 NZ_CPUY01000003.1 Protein Homology CDS 130607 130879 . + 0 ID=cds-WP_002208639.1;Parent=gene-AD853_RS04100;Dbxref=GenBank:WP_002208639.1;Name=WP_002208639.1;gbkey=CDS;gene=hupB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016535194.1;locus_tag=AD853_RS04100;product=nucleoid-associated protein HU-beta;protein_id=WP_002208639.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 131180 133066 . + . ID=gene-AD853_RS04105;Name=ppiD;gbkey=Gene;gene=ppiD;gene_biotype=protein_coding;locus_tag=AD853_RS04105;old_locus_tag=ERS008462_00825 NZ_CPUY01000003.1 Protein Homology CDS 131180 133066 . + 0 ID=cds-WP_011191866.1;Parent=gene-AD853_RS04105;Dbxref=GenBank:WP_011191866.1;Name=WP_011191866.1;Ontology_term=GO:0003755;gbkey=CDS;gene=ppiD;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208638.1;locus_tag=AD853_RS04105;product=peptidylprolyl isomerase;protein_id=WP_011191866.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 133206 133652 . + . ID=gene-AD853_RS04110;Name=AD853_RS04110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS04110;old_locus_tag=ERS008462_00826 NZ_CPUY01000003.1 Protein Homology CDS 133206 133652 . + 0 ID=cds-WP_012105574.1;Parent=gene-AD853_RS04110;Dbxref=GenBank:WP_012105574.1;Name=WP_012105574.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105574.1;locus_tag=AD853_RS04110;product=ComEA family DNA-binding protein;protein_id=WP_012105574.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 134006 134413 . + . ID=gene-AD853_RS04115;Name=AD853_RS04115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS04115;old_locus_tag=ERS008462_00827 NZ_CPUY01000003.1 Protein Homology CDS 134006 134413 . + 0 ID=cds-WP_002208636.1;Parent=gene-AD853_RS04115;Dbxref=GenBank:WP_002208636.1;Name=WP_002208636.1;Ontology_term=GO:0016787,GO:0016790;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,thiolester hydrolase activity|0016790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016581045.1;locus_tag=AD853_RS04115;product=acyl-CoA thioesterase;protein_id=WP_002208636.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 134499 135197 . - . ID=gene-AD853_RS04120;Name=queC;gbkey=Gene;gene=queC;gene_biotype=protein_coding;locus_tag=AD853_RS04120;old_locus_tag=ERS008462_00828 NZ_CPUY01000003.1 Protein Homology CDS 134499 135197 . - 0 ID=cds-WP_002208635.1;Parent=gene-AD853_RS04120;Dbxref=GenBank:WP_002208635.1;Name=WP_002208635.1;gbkey=CDS;gene=queC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208635.1;locus_tag=AD853_RS04120;product=7-cyano-7-deazaguanine synthase QueC;protein_id=WP_002208635.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 135478 137181 . - . ID=gene-AD853_RS04125;Name=AD853_RS04125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS04125;old_locus_tag=ERS008462_00829 NZ_CPUY01000003.1 Protein Homology CDS 135478 137181 . - 0 ID=cds-WP_038824466.1;Parent=gene-AD853_RS04125;Dbxref=GenBank:WP_038824466.1;Name=WP_038824466.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208633.1;locus_tag=AD853_RS04125;product=SgrR family transcriptional regulator;protein_id=WP_038824466.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 137286 138107 . + . ID=gene-AD853_RS04130;Name=cof;gbkey=Gene;gene=cof;gene_biotype=protein_coding;locus_tag=AD853_RS04130;old_locus_tag=ERS008462_00830 NZ_CPUY01000003.1 Protein Homology CDS 137286 138107 . + 0 ID=cds-WP_038824465.1;Parent=gene-AD853_RS04130;Dbxref=GenBank:WP_038824465.1;Name=WP_038824465.1;Ontology_term=GO:0016818;gbkey=CDS;gene=cof;go_function=hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004873440.1;locus_tag=AD853_RS04130;product=HMP-PP phosphatase;protein_id=WP_038824465.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 138319 139359 . - . ID=gene-AD853_RS04135;Name=AD853_RS04135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS04135;old_locus_tag=ERS008462_00831 NZ_CPUY01000003.1 Protein Homology CDS 138319 139359 . - 0 ID=cds-WP_038824464.1;Parent=gene-AD853_RS04135;Dbxref=GenBank:WP_038824464.1;Name=WP_038824464.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004392656.1;locus_tag=AD853_RS04135;product=PLP-dependent cysteine synthase family protein;protein_id=WP_038824464.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 139485 139946 . + . ID=gene-AD853_RS04140;Name=AD853_RS04140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS04140;old_locus_tag=ERS008462_00832 NZ_CPUY01000003.1 Protein Homology CDS 139485 139946 . + 0 ID=cds-WP_002208630.1;Parent=gene-AD853_RS04140;Dbxref=GenBank:WP_002208630.1;Name=WP_002208630.1;Ontology_term=GO:0043565;gbkey=CDS;go_function=sequence-specific DNA binding|0043565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208630.1;locus_tag=AD853_RS04140;product=Lrp/AsnC family transcriptional regulator;protein_id=WP_002208630.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 140048 141814 . + . ID=gene-AD853_RS04145;Name=AD853_RS04145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS04145;old_locus_tag=ERS008462_00833 NZ_CPUY01000003.1 Protein Homology CDS 140048 141814 . + 0 ID=cds-WP_038824463.1;Parent=gene-AD853_RS04145;Dbxref=GenBank:WP_038824463.1;Name=WP_038824463.1;Ontology_term=GO:0055085,GO:0005524,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011191870.1;locus_tag=AD853_RS04145;product=SmdA family multidrug ABC transporter permease/ATP-binding protein;protein_id=WP_038824463.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 141807 143630 . + . ID=gene-AD853_RS04150;Name=AD853_RS04150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS04150;old_locus_tag=ERS008462_00834 NZ_CPUY01000003.1 Protein Homology CDS 141807 143630 . + 0 ID=cds-WP_038824462.1;Parent=gene-AD853_RS04150;Dbxref=GenBank:WP_038824462.1;Name=WP_038824462.1;Ontology_term=GO:0055085,GO:0005524,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208628.1;locus_tag=AD853_RS04150;product=SmdB family multidrug efflux ABC transporter permease/ATP-binding protein;protein_id=WP_038824462.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 144070 144408 . + . ID=gene-AD853_RS04155;Name=glnK;gbkey=Gene;gene=glnK;gene_biotype=protein_coding;locus_tag=AD853_RS04155;old_locus_tag=ERS008462_00835 NZ_CPUY01000003.1 Protein Homology CDS 144070 144408 . + 0 ID=cds-WP_002208627.1;Parent=gene-AD853_RS04155;Dbxref=GenBank:WP_002208627.1;Name=WP_002208627.1;Ontology_term=GO:0006808,GO:0030234;gbkey=CDS;gene=glnK;go_function=enzyme regulator activity|0030234||IEA;go_process=regulation of nitrogen utilization|0006808||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225455.1;locus_tag=AD853_RS04155;product=P-II family nitrogen regulator;protein_id=WP_002208627.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 144448 145737 . + . ID=gene-AD853_RS04160;Name=amtB;gbkey=Gene;gene=amtB;gene_biotype=protein_coding;locus_tag=AD853_RS04160;old_locus_tag=ERS008462_00836 NZ_CPUY01000003.1 Protein Homology CDS 144448 145737 . + 0 ID=cds-WP_038825461.1;Parent=gene-AD853_RS04160;Dbxref=GenBank:WP_038825461.1;Name=WP_038825461.1;Ontology_term=GO:0072488,GO:0008519,GO:0005886;gbkey=CDS;gene=amtB;go_component=plasma membrane|0005886||IEA;go_function=ammonium channel activity|0008519||IEA;go_process=ammonium transmembrane transport|0072488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004718723.1;locus_tag=AD853_RS04160;product=ammonium transporter AmtB;protein_id=WP_038825461.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 145998 146858 . - . ID=gene-AD853_RS04165;Name=tesB;gbkey=Gene;gene=tesB;gene_biotype=protein_coding;locus_tag=AD853_RS04165;old_locus_tag=ERS008462_00837 NZ_CPUY01000003.1 Protein Homology CDS 145998 146858 . - 0 ID=cds-WP_002208625.1;Parent=gene-AD853_RS04165;Dbxref=GenBank:WP_002208625.1;Name=WP_002208625.1;gbkey=CDS;gene=tesB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105571.1;locus_tag=AD853_RS04165;product=acyl-CoA thioesterase II;protein_id=WP_002208625.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 147115 147636 . + . ID=gene-AD853_RS04170;Name=AD853_RS04170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS04170;old_locus_tag=ERS008462_00838 NZ_CPUY01000003.1 Protein Homology CDS 147115 147636 . + 0 ID=cds-WP_011191872.1;Parent=gene-AD853_RS04170;Dbxref=GenBank:WP_011191872.1;Name=WP_011191872.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012413513.1;locus_tag=AD853_RS04170;product=YbaY family lipoprotein;protein_id=WP_011191872.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 147772 148161 . - . ID=gene-AD853_RS04175;Name=AD853_RS04175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS04175;old_locus_tag=ERS008462_00839 NZ_CPUY01000003.1 Protein Homology CDS 147772 148161 . - 0 ID=cds-WP_002208623.1;Parent=gene-AD853_RS04175;Dbxref=GenBank:WP_002208623.1;Name=WP_002208623.1;Ontology_term=GO:0006281,GO:0003677,GO:0003824,GO:0003908;gbkey=CDS;go_function=DNA binding|0003677||IEA,catalytic activity|0003824||IEA,methylated-DNA-[protein]-cysteine S-methyltransferase activity|0003908||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208623.1;locus_tag=AD853_RS04175;product=MGMT family protein;protein_id=WP_002208623.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 148411 148507 . + . ID=gene-AD853_RS20265;Name=ffs;gbkey=Gene;gene=ffs;gene_biotype=SRP_RNA;locus_tag=AD853_RS20265 NZ_CPUY01000003.1 cmsearch SRP_RNA 148411 148507 . + . ID=rna-AD853_RS20265;Parent=gene-AD853_RS20265;Dbxref=RFAM:RF00169;gbkey=ncRNA;gene=ffs;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD853_RS20265;product=signal recognition particle sRNA small type NZ_CPUY01000003.1 cmsearch exon 148411 148507 . + . ID=exon-AD853_RS20265-1;Parent=rna-AD853_RS20265;Dbxref=RFAM:RF00169;gbkey=ncRNA;gene=ffs;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD853_RS20265;product=signal recognition particle sRNA small type NZ_CPUY01000003.1 RefSeq gene 149050 149253 . - . ID=gene-AD853_RS04180;Name=ymoA;gbkey=Gene;gene=ymoA;gene_biotype=protein_coding;locus_tag=AD853_RS04180;old_locus_tag=ERS008462_00842 NZ_CPUY01000003.1 Protein Homology CDS 149050 149253 . - 0 ID=cds-WP_002208622.1;Parent=gene-AD853_RS04180;Dbxref=GenBank:WP_002208622.1;Name=WP_002208622.1;gbkey=CDS;gene=ymoA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006705087.1;locus_tag=AD853_RS04180;product=expression modulating protein YmoA;protein_id=WP_002208622.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 149302 149670 . - . ID=gene-AD853_RS04185;Name=tomB;gbkey=Gene;gene=tomB;gene_biotype=protein_coding;locus_tag=AD853_RS04185;old_locus_tag=ERS008462_00843 NZ_CPUY01000003.1 Protein Homology CDS 149302 149670 . - 0 ID=cds-WP_002218472.1;Parent=gene-AD853_RS04185;Dbxref=GenBank:WP_002218472.1;Name=WP_002218472.1;gbkey=CDS;gene=tomB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004703332.1;locus_tag=AD853_RS04185;product=Hha toxicity modulator TomB;protein_id=WP_002218472.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 149829 150182 . - . ID=gene-AD853_RS04190;Name=AD853_RS04190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS04190;old_locus_tag=ERS008462_00844 NZ_CPUY01000003.1 Protein Homology CDS 149829 150182 . - 0 ID=cds-WP_012105569.1;Parent=gene-AD853_RS04190;Dbxref=GenBank:WP_012105569.1;Name=WP_012105569.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105569.1;locus_tag=AD853_RS04190;product=hypothetical protein;protein_id=WP_012105569.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 151056 151199 . - . ID=gene-AD853_RS04195;Name=ykgO;gbkey=Gene;gene=ykgO;gene_biotype=protein_coding;locus_tag=AD853_RS04195;old_locus_tag=ERS008462_00845 NZ_CPUY01000003.1 Protein Homology CDS 151056 151199 . - 0 ID=cds-WP_038824461.1;Parent=gene-AD853_RS04195;Dbxref=GenBank:WP_038824461.1;Name=WP_038824461.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=ykgO;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208618.1;locus_tag=AD853_RS04195;product=type B 50S ribosomal protein L36;protein_id=WP_038824461.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 151215 151475 . - . ID=gene-AD853_RS04200;Name=AD853_RS04200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS04200;old_locus_tag=ERS008462_00846 NZ_CPUY01000003.1 Protein Homology CDS 151215 151475 . - 0 ID=cds-WP_002208617.1;Parent=gene-AD853_RS04200;Dbxref=GenBank:WP_002208617.1;Name=WP_002208617.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208617.1;locus_tag=AD853_RS04200;product=type B 50S ribosomal protein L31;protein_id=WP_002208617.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 151661 154813 . - . ID=gene-AD853_RS04205;Name=acrB;gbkey=Gene;gene=acrB;gene_biotype=protein_coding;locus_tag=AD853_RS04205;old_locus_tag=ERS008462_00847 NZ_CPUY01000003.1 Protein Homology CDS 151661 154813 . - 0 ID=cds-WP_011191874.1;Parent=gene-AD853_RS04205;Dbxref=GenBank:WP_011191874.1;Name=WP_011191874.1;gbkey=CDS;gene=acrB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005167694.1;locus_tag=AD853_RS04205;product=efflux RND transporter permease AcrB;protein_id=WP_011191874.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 154830 156017 . - . ID=gene-AD853_RS04210;Name=AD853_RS04210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS04210;old_locus_tag=ERS008462_00848 NZ_CPUY01000003.1 Protein Homology CDS 154830 156017 . - 0 ID=cds-WP_002208615.1;Parent=gene-AD853_RS04210;Dbxref=GenBank:WP_002208615.1;Name=WP_002208615.1;Ontology_term=GO:0006810,GO:0005215,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005158151.1;locus_tag=AD853_RS04210;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_002208615.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 156162 156818 . + . ID=gene-AD853_RS04215;Name=acrR;gbkey=Gene;gene=acrR;gene_biotype=protein_coding;locus_tag=AD853_RS04215;old_locus_tag=ERS008462_00849 NZ_CPUY01000003.1 Protein Homology CDS 156162 156818 . + 0 ID=cds-WP_002208614.1;Parent=gene-AD853_RS04215;Dbxref=GenBank:WP_002208614.1;Name=WP_002208614.1;gbkey=CDS;gene=acrR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208614.1;locus_tag=AD853_RS04215;product=multidrug efflux transporter transcriptional repressor AcrR;protein_id=WP_002208614.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 156831 157184 . + . ID=gene-AD853_RS04220;Name=AD853_RS04220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS04220;old_locus_tag=ERS008462_00850 NZ_CPUY01000003.1 Protein Homology CDS 156831 157184 . + 0 ID=cds-WP_038824231.1;Parent=gene-AD853_RS04220;Dbxref=GenBank:WP_038824231.1;Name=WP_038824231.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304498.1;locus_tag=AD853_RS04220;product=DsrE/DsrF/TusD sulfur relay family protein;protein_id=WP_038824231.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 157480 160842 . + . ID=gene-AD853_RS04225;Name=mscK;gbkey=Gene;gene=mscK;gene_biotype=protein_coding;locus_tag=AD853_RS04225;old_locus_tag=ERS008462_00851 NZ_CPUY01000003.1 Protein Homology CDS 157480 160842 . + 0 ID=cds-WP_038824232.1;Parent=gene-AD853_RS04225;Dbxref=GenBank:WP_038824232.1;Name=WP_038824232.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=mscK;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016599076.1;locus_tag=AD853_RS04225;product=mechanosensitive channel MscK;protein_id=WP_038824232.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 161148 161303 . - . ID=gene-AD853_RS04230;Name=rsmS;gbkey=Gene;gene=rsmS;gene_biotype=protein_coding;locus_tag=AD853_RS04230;old_locus_tag=ERS008462_00852 NZ_CPUY01000003.1 Protein Homology CDS 161148 161303 . - 0 ID=cds-WP_002208611.1;Parent=gene-AD853_RS04230;Dbxref=GenBank:WP_002208611.1;Name=WP_002208611.1;gbkey=CDS;gene=rsmS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208611.1;locus_tag=AD853_RS04230;product=pleiotropic regulatory protein RsmS;protein_id=WP_002208611.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 161465 162001 . - . ID=gene-AD853_RS04235;Name=priC;gbkey=Gene;gene=priC;gene_biotype=protein_coding;locus_tag=AD853_RS04235;old_locus_tag=ERS008462_00853 NZ_CPUY01000003.1 Protein Homology CDS 161465 162001 . - 0 ID=cds-WP_002208610.1;Parent=gene-AD853_RS04235;Dbxref=GenBank:WP_002208610.1;Name=WP_002208610.1;gbkey=CDS;gene=priC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011191876.1;locus_tag=AD853_RS04235;product=primosomal replication protein PriC;protein_id=WP_002208610.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 162202 162582 . + . ID=gene-AD853_RS20270;Name=AD853_RS20270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS20270;old_locus_tag=ERS008462_00854 NZ_CPUY01000003.1 Protein Homology CDS 162202 162582 . + 0 ID=cds-WP_002228346.1;Parent=gene-AD853_RS20270;Dbxref=GenBank:WP_002228346.1;Name=WP_002228346.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002228346.1;locus_tag=AD853_RS20270;product=DUF454 family protein;protein_id=WP_002228346.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 162821 163384 . + . ID=gene-AD853_RS04245;Name=apt;gbkey=Gene;gene=apt;gene_biotype=protein_coding;locus_tag=AD853_RS04245;old_locus_tag=ERS008462_00855 NZ_CPUY01000003.1 Protein Homology CDS 162821 163384 . + 0 ID=cds-WP_011191877.1;Parent=gene-AD853_RS04245;Dbxref=GenBank:WP_011191877.1;Name=WP_011191877.1;Ontology_term=GO:0006168,GO:0003999;gbkey=CDS;gene=apt;go_function=adenine phosphoribosyltransferase activity|0003999||IEA;go_process=adenine salvage|0006168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105567.1;locus_tag=AD853_RS04245;product=adenine phosphoribosyltransferase;protein_id=WP_011191877.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 164025 166001 . + . ID=gene-AD853_RS04250;Name=dnaX;gbkey=Gene;gene=dnaX;gene_biotype=protein_coding;locus_tag=AD853_RS04250;old_locus_tag=ERS008462_00856 NZ_CPUY01000003.1 Protein Homology CDS 164025 166001 . + 0 ID=cds-WP_002208605.1;Parent=gene-AD853_RS04250;Dbxref=GenBank:WP_002208605.1;Name=WP_002208605.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887,GO:0005524,GO:0009360;gbkey=CDS;gene=dnaX;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208605.1;locus_tag=AD853_RS04250;product=DNA polymerase III subunit gamma/tau;protein_id=WP_002208605.1;transl_table=11 NZ_CPUY01000003.1 cmsearch sequence_feature 165331 165395 . + . ID=id-AD853_RS04250;Dbxref=RFAM:RF00382;Note=DnaX frameshifting element;gbkey=misc_feature;gene=dnaX;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD853_RS04250 NZ_CPUY01000003.1 RefSeq gene 166057 166389 . + . ID=gene-AD853_RS04255;Name=AD853_RS04255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS04255;old_locus_tag=ERS008462_00857 NZ_CPUY01000003.1 Protein Homology CDS 166057 166389 . + 0 ID=cds-WP_002208604.1;Parent=gene-AD853_RS04255;Dbxref=GenBank:WP_002208604.1;Name=WP_002208604.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001364632.1;locus_tag=AD853_RS04255;product=YbaB/EbfC family nucleoid-associated protein;protein_id=WP_002208604.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 166389 166994 . + . ID=gene-AD853_RS04260;Name=recR;gbkey=Gene;gene=recR;gene_biotype=protein_coding;locus_tag=AD853_RS04260;old_locus_tag=ERS008462_00858 NZ_CPUY01000003.1 Protein Homology CDS 166389 166994 . + 0 ID=cds-WP_002208603.1;Parent=gene-AD853_RS04260;Dbxref=GenBank:WP_002208603.1;Name=WP_002208603.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677,GO:0046872;gbkey=CDS;gene=recR;go_function=DNA binding|0003677||IEA,metal ion binding|0046872||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019081275.1;locus_tag=AD853_RS04260;product=recombination mediator RecR;protein_id=WP_002208603.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 167192 169060 . + . ID=gene-AD853_RS04265;Name=htpG;gbkey=Gene;gene=htpG;gene_biotype=protein_coding;locus_tag=AD853_RS04265;old_locus_tag=ERS008462_00859 NZ_CPUY01000003.1 Protein Homology CDS 167192 169060 . + 0 ID=cds-WP_002354670.1;Parent=gene-AD853_RS04265;Dbxref=GenBank:WP_002354670.1;Name=WP_002354670.1;Ontology_term=GO:0006457,GO:0005524,GO:0016887,GO:0051082;gbkey=CDS;gene=htpG;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013649462.1;locus_tag=AD853_RS04265;product=molecular chaperone HtpG;protein_id=WP_002354670.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 169287 169931 . + . ID=gene-AD853_RS04270;Name=adk;gbkey=Gene;gene=adk;gene_biotype=protein_coding;locus_tag=AD853_RS04270;old_locus_tag=ERS008462_00860 NZ_CPUY01000003.1 Protein Homology CDS 169287 169931 . + 0 ID=cds-WP_002208600.1;Parent=gene-AD853_RS04270;Dbxref=GenBank:WP_002208600.1;Name=WP_002208600.1;Ontology_term=GO:0006139,GO:0004017,GO:0005524;gbkey=CDS;gene=adk;go_function=AMP kinase activity|0004017||IEA,ATP binding|0005524||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415007.1;locus_tag=AD853_RS04270;product=adenylate kinase;protein_id=WP_002208600.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 170021 170983 . + . ID=gene-AD853_RS04275;Name=hemH;gbkey=Gene;gene=hemH;gene_biotype=protein_coding;locus_tag=AD853_RS04275;old_locus_tag=ERS008462_00861 NZ_CPUY01000003.1 Protein Homology CDS 170021 170983 . + 0 ID=cds-WP_002208599.1;Parent=gene-AD853_RS04275;Dbxref=GenBank:WP_002208599.1;Name=WP_002208599.1;Ontology_term=GO:0006779,GO:0004325;gbkey=CDS;gene=hemH;go_function=ferrochelatase activity|0004325||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208599.1;locus_tag=AD853_RS04275;product=ferrochelatase;protein_id=WP_002208599.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 171581 172570 . + . ID=gene-AD853_RS04280;Name=AD853_RS04280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS04280;old_locus_tag=ERS008462_00863 NZ_CPUY01000003.1 Protein Homology CDS 171581 172570 . + 0 ID=cds-WP_002208598.1;Parent=gene-AD853_RS04280;Dbxref=GenBank:WP_002208598.1;Name=WP_002208598.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208598.1;locus_tag=AD853_RS04280;product=CDP-6-deoxy-delta-3%2C4-glucoseen reductase;protein_id=WP_002208598.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 172608 173381 . + . ID=gene-AD853_RS04285;Name=rfbF;gbkey=Gene;gene=rfbF;gene_biotype=protein_coding;locus_tag=AD853_RS04285;old_locus_tag=ERS008462_00864 NZ_CPUY01000003.1 Protein Homology CDS 172608 173381 . + 0 ID=cds-WP_002208597.1;Parent=gene-AD853_RS04285;Dbxref=GenBank:WP_002208597.1;Name=WP_002208597.1;Ontology_term=GO:0009243,GO:0047343;gbkey=CDS;gene=rfbF;go_function=glucose-1-phosphate cytidylyltransferase activity|0047343||IEA;go_process=O antigen biosynthetic process|0009243||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461037.1;locus_tag=AD853_RS04285;product=glucose-1-phosphate cytidylyltransferase;protein_id=WP_002208597.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 173386 174459 . + . ID=gene-AD853_RS04290;Name=rfbG;gbkey=Gene;gene=rfbG;gene_biotype=protein_coding;locus_tag=AD853_RS04290;old_locus_tag=ERS008462_00865 NZ_CPUY01000003.1 Protein Homology CDS 173386 174459 . + 0 ID=cds-WP_071990068.1;Parent=gene-AD853_RS04290;Dbxref=GenBank:WP_071990068.1;Name=WP_071990068.1;Ontology_term=GO:0009243,GO:0047733;gbkey=CDS;gene=rfbG;go_function=CDP-glucose 4%2C6-dehydratase activity|0047733||IEA;go_process=O antigen biosynthetic process|0009243||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002229992.1;locus_tag=AD853_RS04290;product=CDP-glucose 4%2C6-dehydratase;protein_id=WP_071990068.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 174477 175790 . + . ID=gene-AD853_RS04295;Name=rfbH;gbkey=Gene;gene=rfbH;gene_biotype=protein_coding;locus_tag=AD853_RS04295;old_locus_tag=ERS008462_00866 NZ_CPUY01000003.1 Protein Homology CDS 174477 175790 . + 0 ID=cds-WP_002208596.1;Parent=gene-AD853_RS04295;Dbxref=GenBank:WP_002208596.1;Name=WP_002208596.1;Ontology_term=GO:0003824;gbkey=CDS;gene=rfbH;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019082567.1;locus_tag=AD853_RS04295;product=lipopolysaccharide biosynthesis protein RfbH;protein_id=WP_002208596.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 175827 176684 . + . ID=gene-AD853_RS04300;Name=AD853_RS04300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS04300;old_locus_tag=ERS008462_00867 NZ_CPUY01000003.1 Protein Homology CDS 175827 176684 . + 0 ID=cds-WP_011191882.1;Parent=gene-AD853_RS04300;Dbxref=GenBank:WP_011191882.1;Name=WP_011191882.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011191882.1;locus_tag=AD853_RS04300;product=NAD-dependent epimerase/dehydratase;protein_id=WP_011191882.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 177166 178128 . + . ID=gene-AD853_RS04305;Name=AD853_RS04305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS04305;old_locus_tag=ERS008462_00868 NZ_CPUY01000003.1 Protein Homology CDS 177166 178128 . + 0 ID=cds-WP_012304493.1;Parent=gene-AD853_RS04305;Dbxref=GenBank:WP_012304493.1;Name=WP_012304493.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: protein motif:HMM:NF012745.7;locus_tag=AD853_RS04305;product=glycosyltransferase family 2 protein;protein_id=WP_012304493.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 178295 179602 . + . ID=gene-AD853_RS04310;Name=AD853_RS04310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS04310;old_locus_tag=ERS008462_00869 NZ_CPUY01000003.1 GeneMarkS-2+ CDS 178295 179602 . + 0 ID=cds-WP_012304492.1;Parent=gene-AD853_RS04310;Dbxref=GenBank:WP_012304492.1;Name=WP_012304492.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AD853_RS04310;product=MATE family efflux transporter;protein_id=WP_012304492.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 179665 180924 . + . ID=gene-AD853_RS04315;Name=wzy;gbkey=Gene;gene=wzy;gene_biotype=protein_coding;locus_tag=AD853_RS04315;old_locus_tag=ERS008462_00870 NZ_CPUY01000003.1 Protein Homology CDS 179665 180924 . + 0 ID=cds-WP_050124569.1;Parent=gene-AD853_RS04315;Dbxref=GenBank:WP_050124569.1;Name=WP_050124569.1;gbkey=CDS;gene=wzy;inference=COORDINATES: protein motif:HMM:NF033860.0;locus_tag=AD853_RS04315;product=oligosaccharide repeat unit polymerase;protein_id=WP_050124569.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 180944 181957 . + . ID=gene-AD853_RS04320;Name=AD853_RS04320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS04320;old_locus_tag=ERS008462_00871 NZ_CPUY01000003.1 Protein Homology CDS 180944 181957 . + 0 ID=cds-WP_038824234.1;Parent=gene-AD853_RS04320;Dbxref=GenBank:WP_038824234.1;Name=WP_038824234.1;Ontology_term=GO:0009101,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=glycoprotein biosynthetic process|0009101||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011191887.1;locus_tag=AD853_RS04320;product=glycosyltransferase family 4 protein;protein_id=WP_038824234.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 181973 183094 . + . ID=gene-AD853_RS04325;Name=gmd;gbkey=Gene;gene=gmd;gene_biotype=protein_coding;locus_tag=AD853_RS04325;old_locus_tag=ERS008462_00872 NZ_CPUY01000003.1 Protein Homology CDS 181973 183094 . + 0 ID=cds-WP_011191888.1;Parent=gene-AD853_RS04325;Dbxref=GenBank:WP_011191888.1;Name=WP_011191888.1;Ontology_term=GO:0000271,GO:0019673,GO:0008446;gbkey=CDS;gene=gmd;go_function=GDP-mannose 4%2C6-dehydratase activity|0008446||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA,GDP-mannose metabolic process|0019673||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008455078.1;locus_tag=AD853_RS04325;product=GDP-mannose 4%2C6-dehydratase;protein_id=WP_011191888.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 183100 184065 . + . ID=gene-AD853_RS04330;Name=fcl;gbkey=Gene;gene=fcl;gene_biotype=protein_coding;gene_synonym=wcaG,yefB;locus_tag=AD853_RS04330;old_locus_tag=ERS008462_00873 NZ_CPUY01000003.1 Protein Homology CDS 183100 184065 . + 0 ID=cds-WP_038824235.1;Parent=gene-AD853_RS04330;Dbxref=GenBank:WP_038824235.1;Name=WP_038824235.1;Ontology_term=GO:0042351,GO:0016853,GO:0050577;gbkey=CDS;gene=fcl;go_function=isomerase activity|0016853||IEA,GDP-L-fucose synthase activity|0050577||IEA;go_process='de novo' GDP-L-fucose biosynthetic process|0042351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004873393.1;locus_tag=AD853_RS04330;product=GDP-L-fucose synthase;protein_id=WP_038824235.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 184245 185633 . + . ID=gene-AD853_RS04335;Name=AD853_RS04335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS04335;old_locus_tag=ERS008462_00874 NZ_CPUY01000003.1 Protein Homology CDS 184245 185633 . + 0 ID=cds-WP_038825182.1;Parent=gene-AD853_RS04335;Dbxref=GenBank:WP_038825182.1;Name=WP_038825182.1;Ontology_term=GO:0000271,GO:0016779;gbkey=CDS;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304489.1;locus_tag=AD853_RS04335;product=mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase;protein_id=WP_038825182.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 185668 186417 . + . ID=gene-AD853_RS04340;Name=AD853_RS04340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS04340;old_locus_tag=ERS008462_00875 NZ_CPUY01000003.1 Protein Homology CDS 185668 186417 . + 0 ID=cds-WP_012304488.1;Parent=gene-AD853_RS04340;Dbxref=GenBank:WP_012304488.1;Name=WP_012304488.1;Ontology_term=GO:0009101,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=glycoprotein biosynthetic process|0009101||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304488.1;locus_tag=AD853_RS04340;product=glycosyltransferase family 2 protein;protein_id=WP_012304488.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 186765 187724 . + . ID=gene-AD853_RS04345;Name=AD853_RS04345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS04345;old_locus_tag=ERS008462_00876 NZ_CPUY01000003.1 Protein Homology CDS 186765 187724 . + 0 ID=cds-WP_038825184.1;Parent=gene-AD853_RS04345;Dbxref=GenBank:WP_038825184.1;Name=WP_038825184.1;Ontology_term=GO:0016491,GO:0051287,GO:0070403;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD binding|0051287||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304487.1;locus_tag=AD853_RS04345;product=NAD-dependent epimerase/dehydratase family protein;protein_id=WP_038825184.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 188028 189398 . + . ID=gene-AD853_RS04350;Name=cpsG;gbkey=Gene;gene=cpsG;gene_biotype=protein_coding;locus_tag=AD853_RS04350;old_locus_tag=ERS008462_00877 NZ_CPUY01000003.1 Protein Homology CDS 188028 189398 . + 0 ID=cds-WP_038825186.1;Parent=gene-AD853_RS04350;Dbxref=GenBank:WP_038825186.1;Name=WP_038825186.1;gbkey=CDS;gene=cpsG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017383277.1;locus_tag=AD853_RS04350;product=phosphomannomutase CpsG;protein_id=WP_038825186.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 189449 190600 . + . ID=gene-AD853_RS04355;Name=wzz(fepE);gbkey=Gene;gene=wzz(fepE);gene_biotype=protein_coding;locus_tag=AD853_RS04355;old_locus_tag=ERS008462_00878 NZ_CPUY01000003.1 Protein Homology CDS 189449 190600 . + 0 ID=cds-WP_038825187.1;Parent=gene-AD853_RS04355;Dbxref=GenBank:WP_038825187.1;Name=WP_038825187.1;Ontology_term=GO:0009103,GO:0016020;gbkey=CDS;gene=wzz(fepE);go_component=membrane|0016020||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304485.1;locus_tag=AD853_RS04355;product=LPS O-antigen length regulator Wzz(fepE);protein_id=WP_038825187.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 190804 192108 . + . ID=gene-AD853_RS04360;Name=AD853_RS04360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS04360;old_locus_tag=ERS008462_00879 NZ_CPUY01000003.1 Protein Homology CDS 190804 192108 . + 0 ID=cds-WP_002208586.1;Parent=gene-AD853_RS04360;Dbxref=GenBank:WP_002208586.1;Name=WP_002208586.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459486.1;locus_tag=AD853_RS04360;product=inosine/guanosine kinase;protein_id=WP_002208586.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 192205 193896 . - . ID=gene-AD853_RS04365;Name=ybaL;gbkey=Gene;gene=ybaL;gene_biotype=protein_coding;locus_tag=AD853_RS04365;old_locus_tag=ERS008462_00880 NZ_CPUY01000003.1 Protein Homology CDS 192205 193896 . - 0 ID=cds-WP_002208585.1;Parent=gene-AD853_RS04365;Dbxref=GenBank:WP_002208585.1;Name=WP_002208585.1;Ontology_term=GO:0006813,GO:0008324,GO:0051139,GO:0016020;gbkey=CDS;gene=ybaL;go_component=membrane|0016020||IEA;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA,metal cation:proton antiporter activity|0051139||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015683715.1;locus_tag=AD853_RS04365;product=YbaL family putative K(+) efflux transporter;protein_id=WP_002208585.1;transl_table=11 NZ_CPUY01000003.1 RefSeq pseudogene 194131 195344 . - . ID=gene-AD853_RS04370;Name=rosA;gbkey=Gene;gene=rosA;gene_biotype=pseudogene;locus_tag=AD853_RS04370;old_locus_tag=ERS008462_00881;pseudo=true NZ_CPUY01000003.1 Protein Homology CDS 194131 195344 . - 0 ID=cds-AD853_RS04370;Parent=gene-AD853_RS04370;Note=frameshifted;gbkey=CDS;gene=rosA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019082577.1;locus_tag=AD853_RS04370;product=MFS transporter RosA;pseudo=true;transl_table=11 NZ_CPUY01000003.1 RefSeq pseudogene 195626 197291 . + . ID=gene-AD853_RS22440;Name=ushA;gbkey=Gene;gene=ushA;gene_biotype=pseudogene;locus_tag=AD853_RS22440;pseudo=true NZ_CPUY01000003.1 Protein Homology CDS 195626 197291 . + 0 ID=cds-AD853_RS22440;Parent=gene-AD853_RS22440;Note=frameshifted;Ontology_term=GO:0009166,GO:0000166,GO:0016787,GO:0046872;gbkey=CDS;gene=ushA;go_function=nucleotide binding|0000166||IEA,hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;go_process=nucleotide catabolic process|0009166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105559.1;locus_tag=AD853_RS22440;product=bifunctional UDP-sugar hydrolase/5'-nucleotidase UshA;pseudo=true;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 197395 197634 . - . ID=gene-AD853_RS04390;Name=AD853_RS04390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS04390;old_locus_tag=ERS008462_00885 NZ_CPUY01000003.1 Protein Homology CDS 197395 197634 . - 0 ID=cds-WP_002208583.1;Parent=gene-AD853_RS04390;Dbxref=GenBank:WP_002208583.1;Name=WP_002208583.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002429196.1;locus_tag=AD853_RS04390;product=hypothetical protein;protein_id=WP_002208583.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 197971 198450 . - . ID=gene-AD853_RS04400;Name=ybaK;gbkey=Gene;gene=ybaK;gene_biotype=protein_coding;locus_tag=AD853_RS04400;old_locus_tag=ERS008462_00887 NZ_CPUY01000003.1 Protein Homology CDS 197971 198450 . - 0 ID=cds-WP_032466186.1;Parent=gene-AD853_RS04400;Dbxref=GenBank:WP_032466186.1;Name=WP_032466186.1;Ontology_term=GO:0002161;gbkey=CDS;gene=ybaK;go_function=aminoacyl-tRNA deacylase activity|0002161||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006818871.1;locus_tag=AD853_RS04400;product=Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK;protein_id=WP_032466186.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 198714 199523 . - . ID=gene-AD853_RS04405;Name=AD853_RS04405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS04405 NZ_CPUY01000003.1 Protein Homology CDS 198714 199523 . - 0 ID=cds-WP_002208580.1;Parent=gene-AD853_RS04405;Dbxref=GenBank:WP_002208580.1;Name=WP_002208580.1;Ontology_term=GO:0008233;gbkey=CDS;go_function=peptidase activity|0008233||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208580.1;locus_tag=AD853_RS04405;product=TraB/GumN family protein;protein_id=WP_002208580.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 199672 202557 . - . ID=gene-AD853_RS04410;Name=copA;gbkey=Gene;gene=copA;gene_biotype=protein_coding;locus_tag=AD853_RS04410;old_locus_tag=ERS008462_00889 NZ_CPUY01000003.1 Protein Homology CDS 199672 202557 . - 0 ID=cds-WP_050124570.1;Parent=gene-AD853_RS04410;Dbxref=GenBank:WP_050124570.1;Name=WP_050124570.1;Ontology_term=GO:0006812,GO:0019829;gbkey=CDS;gene=copA;go_function=ATPase-coupled monoatomic cation transmembrane transporter activity|0019829||IEA;go_process=monoatomic cation transport|0006812||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012413530.1;locus_tag=AD853_RS04410;product=copper-exporting P-type ATPase CopA;protein_id=WP_050124570.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 202764 202862 . + . ID=gene-AD853_RS22015;Name=AD853_RS22015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS22015;old_locus_tag=ERS008462_00890 NZ_CPUY01000003.1 Protein Homology CDS 202764 202862 . + 0 ID=cds-WP_230674869.1;Parent=gene-AD853_RS22015;Dbxref=GenBank:WP_230674869.1;Name=WP_230674869.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:NF012594.6;locus_tag=AD853_RS22015;product=MerR family DNA-binding transcriptional regulator;protein_id=WP_230674869.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 202822 203181 . + . ID=gene-AD853_RS04415;Name=AD853_RS04415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS04415;old_locus_tag=ERS008462_00891 NZ_CPUY01000003.1 Protein Homology CDS 202822 203181 . + 0 ID=cds-WP_230674870.1;Parent=gene-AD853_RS04415;Dbxref=GenBank:WP_230674870.1;Name=WP_230674870.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024803.6;locus_tag=AD853_RS04415;product=MerR family DNA-binding protein;protein_id=WP_230674870.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 203361 203810 . - . ID=gene-AD853_RS04420;Name=AD853_RS04420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS04420;old_locus_tag=ERS008462_00892 NZ_CPUY01000003.1 Protein Homology CDS 203361 203810 . - 0 ID=cds-WP_002208577.1;Parent=gene-AD853_RS04420;Dbxref=GenBank:WP_002208577.1;Name=WP_002208577.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208577.1;locus_tag=AD853_RS04420;product=NfeD family protein;protein_id=WP_002208577.1;transl_table=11 NZ_CPUY01000003.1 RefSeq pseudogene 203813 204731 . - . ID=gene-AD853_RS04425;Name=AD853_RS04425;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD853_RS04425;pseudo=true NZ_CPUY01000003.1 Protein Homology CDS 203813 204731 . - 0 ID=cds-AD853_RS04425;Parent=gene-AD853_RS04425;Note=frameshifted;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004714639.1;locus_tag=AD853_RS04425;product=SPFH domain-containing protein;pseudo=true;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 204926 205795 . - . ID=gene-AD853_RS04430;Name=AD853_RS04430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS04430;old_locus_tag=ERS008462_00895 NZ_CPUY01000003.1 Protein Homology CDS 204926 205795 . - 0 ID=cds-WP_032466185.1;Parent=gene-AD853_RS04430;Dbxref=GenBank:WP_032466185.1;Name=WP_032466185.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208575.1;locus_tag=AD853_RS04430;product=thioredoxin family protein;protein_id=WP_032466185.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 205872 206648 . - . ID=gene-AD853_RS04435;Name=AD853_RS04435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS04435;old_locus_tag=ERS008462_00896 NZ_CPUY01000003.1 Protein Homology CDS 205872 206648 . - 0 ID=cds-WP_002208574.1;Parent=gene-AD853_RS04435;Dbxref=GenBank:WP_002208574.1;Name=WP_002208574.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019081255.1;locus_tag=AD853_RS04435;product=SDR family oxidoreductase;protein_id=WP_002208574.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 207035 207670 . - . ID=gene-AD853_RS04440;Name=tesA;gbkey=Gene;gene=tesA;gene_biotype=protein_coding;locus_tag=AD853_RS04440;old_locus_tag=ERS008462_00897 NZ_CPUY01000003.1 Protein Homology CDS 207035 207670 . - 0 ID=cds-WP_002208573.1;Parent=gene-AD853_RS04440;Dbxref=GenBank:WP_002208573.1;Name=WP_002208573.1;Ontology_term=GO:0006629,GO:0016298;gbkey=CDS;gene=tesA;go_function=lipase activity|0016298||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014462442.1;locus_tag=AD853_RS04440;product=multifunctional acyl-CoA thioesterase I/protease I/lysophospholipase L1;protein_id=WP_002208573.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 207641 208327 . + . ID=gene-AD853_RS04445;Name=ybbA;gbkey=Gene;gene=ybbA;gene_biotype=protein_coding;locus_tag=AD853_RS04445;old_locus_tag=ERS008462_00898 NZ_CPUY01000003.1 Protein Homology CDS 207641 208327 . + 0 ID=cds-WP_011191895.1;Parent=gene-AD853_RS04445;Dbxref=GenBank:WP_011191895.1;Name=WP_011191895.1;gbkey=CDS;gene=ybbA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013508191.1;locus_tag=AD853_RS04445;product=putative ABC transporter ATP-binding protein YbbA;protein_id=WP_011191895.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 208324 210753 . + . ID=gene-AD853_RS04450;Name=ybbP;gbkey=Gene;gene=ybbP;gene_biotype=protein_coding;locus_tag=AD853_RS04450;old_locus_tag=ERS008462_00899 NZ_CPUY01000003.1 Protein Homology CDS 208324 210753 . + 0 ID=cds-WP_038824947.1;Parent=gene-AD853_RS04450;Dbxref=GenBank:WP_038824947.1;Name=WP_038824947.1;gbkey=CDS;gene=ybbP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304482.1;locus_tag=AD853_RS04450;product=putative ABC transporter permease subunit YbbP;protein_id=WP_038824947.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 210797 211861 . - . ID=gene-AD853_RS04455;Name=purK;gbkey=Gene;gene=purK;gene_biotype=protein_coding;locus_tag=AD853_RS04455;old_locus_tag=ERS008462_00900 NZ_CPUY01000003.1 Protein Homology CDS 210797 211861 . - 0 ID=cds-WP_038824948.1;Parent=gene-AD853_RS04455;Dbxref=GenBank:WP_038824948.1;Name=WP_038824948.1;Ontology_term=GO:0006189,GO:0004638,GO:0005524,GO:0046872;gbkey=CDS;gene=purK;go_function=phosphoribosylaminoimidazole carboxylase activity|0004638||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005158266.1;locus_tag=AD853_RS04455;product=5-(carboxyamino)imidazole ribonucleotide synthase;protein_id=WP_038824948.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 211858 212382 . - . ID=gene-AD853_RS04460;Name=purE;gbkey=Gene;gene=purE;gene_biotype=protein_coding;locus_tag=AD853_RS04460;old_locus_tag=ERS008462_00901 NZ_CPUY01000003.1 Protein Homology CDS 211858 212382 . - 0 ID=cds-WP_002208569.1;Parent=gene-AD853_RS04460;Dbxref=GenBank:WP_002208569.1;Name=WP_002208569.1;Ontology_term=GO:0006189,GO:0009152,GO:0004638,GO:0009320;gbkey=CDS;gene=purE;go_component=phosphoribosylaminoimidazole carboxylase complex|0009320||IEA;go_function=phosphoribosylaminoimidazole carboxylase activity|0004638||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA,purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208569.1;locus_tag=AD853_RS04460;product=5-(carboxyamino)imidazole ribonucleotide mutase;protein_id=WP_002208569.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 212678 213400 . - . ID=gene-AD853_RS04465;Name=AD853_RS04465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS04465;old_locus_tag=ERS008462_00902 NZ_CPUY01000003.1 Protein Homology CDS 212678 213400 . - 0 ID=cds-WP_050102058.1;Parent=gene-AD853_RS04465;Dbxref=GenBank:WP_050102058.1;Name=WP_050102058.1;Ontology_term=GO:0009245,GO:0016462;gbkey=CDS;go_function=pyrophosphatase activity|0016462||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005167787.1;locus_tag=AD853_RS04465;product=UDP-2%2C3-diacylglucosamine diphosphatase;protein_id=WP_050102058.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 213411 213905 . - . ID=gene-AD853_RS04470;Name=ppiB;gbkey=Gene;gene=ppiB;gene_biotype=protein_coding;locus_tag=AD853_RS04470;old_locus_tag=ERS008462_00903 NZ_CPUY01000003.1 Protein Homology CDS 213411 213905 . - 0 ID=cds-WP_002208567.1;Parent=gene-AD853_RS04470;Dbxref=GenBank:WP_002208567.1;Name=WP_002208567.1;gbkey=CDS;gene=ppiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415058.1;locus_tag=AD853_RS04470;product=peptidylprolyl isomerase B;protein_id=WP_002208567.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 214116 215501 . + . ID=gene-AD853_RS04475;Name=cysS;gbkey=Gene;gene=cysS;gene_biotype=protein_coding;locus_tag=AD853_RS04475;old_locus_tag=ERS008462_00904 NZ_CPUY01000003.1 Protein Homology CDS 214116 215501 . + 0 ID=cds-WP_024063201.1;Parent=gene-AD853_RS04475;Dbxref=GenBank:WP_024063201.1;Name=WP_024063201.1;Ontology_term=GO:0006423,GO:0004817,GO:0005524,GO:0005737;gbkey=CDS;gene=cysS;go_component=cytoplasm|0005737||IEA;go_function=cysteine-tRNA ligase activity|0004817||IEA,ATP binding|0005524||IEA;go_process=cysteinyl-tRNA aminoacylation|0006423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005125243.1;locus_tag=AD853_RS04475;product=cysteine--tRNA ligase;protein_id=WP_024063201.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 215723 215935 . - . ID=gene-AD853_RS04480;Name=ybcJ;gbkey=Gene;gene=ybcJ;gene_biotype=protein_coding;locus_tag=AD853_RS04480;old_locus_tag=ERS008462_00905 NZ_CPUY01000003.1 Protein Homology CDS 215723 215935 . - 0 ID=cds-WP_002209775.1;Parent=gene-AD853_RS04480;Dbxref=GenBank:WP_002209775.1;Name=WP_002209775.1;gbkey=CDS;gene=ybcJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209775.1;locus_tag=AD853_RS04480;product=ribosome-associated protein YbcJ;protein_id=WP_002209775.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 215950 216816 . - . ID=gene-AD853_RS04485;Name=folD;gbkey=Gene;gene=folD;gene_biotype=protein_coding;locus_tag=AD853_RS04485;old_locus_tag=ERS008462_00906 NZ_CPUY01000003.1 Protein Homology CDS 215950 216816 . - 0 ID=cds-WP_002209774.1;Parent=gene-AD853_RS04485;Dbxref=GenBank:WP_002209774.1;Name=WP_002209774.1;Ontology_term=GO:0004488;gbkey=CDS;gene=folD;go_function=methylenetetrahydrofolate dehydrogenase (NADP+) activity|0004488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209774.1;locus_tag=AD853_RS04485;product=bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD;protein_id=WP_002209774.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 217032 217108 . + . ID=gene-AD853_RS04490;Name=AD853_RS04490;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD853_RS04490;old_locus_tag=ERS008462_00907 NZ_CPUY01000003.1 tRNAscan-SE tRNA 217032 217108 . + . ID=rna-AD853_RS04490;Parent=gene-AD853_RS04490;anticodon=(pos:217066..217068);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD853_RS04490;product=tRNA-Arg NZ_CPUY01000003.1 tRNAscan-SE exon 217032 217108 . + . ID=exon-AD853_RS04490-1;Parent=rna-AD853_RS04490;anticodon=(pos:217066..217068);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD853_RS04490;product=tRNA-Arg NZ_CPUY01000003.1 RefSeq gene 217184 217366 . - . ID=gene-AD853_RS04495;Name=AD853_RS04495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS04495 NZ_CPUY01000003.1 Protein Homology CDS 217184 217366 . - 0 ID=cds-WP_002215270.1;Parent=gene-AD853_RS04495;Dbxref=GenBank:WP_002215270.1;Name=WP_002215270.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002215270.1;locus_tag=AD853_RS04495;product=helix-turn-helix transcriptional regulator;protein_id=WP_002215270.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 217625 217825 . - . ID=gene-AD853_RS04500;Name=AD853_RS04500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS04500 NZ_CPUY01000003.1 Protein Homology CDS 217625 217825 . - 0 ID=cds-WP_002215268.1;Parent=gene-AD853_RS04500;Dbxref=GenBank:WP_002215268.1;Name=WP_002215268.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011191898.1;locus_tag=AD853_RS04500;product=hypothetical protein;protein_id=WP_002215268.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 217939 218436 . - . ID=gene-AD853_RS04505;Name=AD853_RS04505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS04505;old_locus_tag=ERS008462_00908 NZ_CPUY01000003.1 Protein Homology CDS 217939 218436 . - 0 ID=cds-WP_223847758.1;Parent=gene-AD853_RS04505;Dbxref=GenBank:WP_223847758.1;Name=WP_223847758.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002228356.1;locus_tag=AD853_RS04505;product=hypothetical protein;protein_id=WP_223847758.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 218571 218909 . - . ID=gene-AD853_RS04510;Name=AD853_RS04510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS04510;old_locus_tag=ERS008462_00909 NZ_CPUY01000003.1 Protein Homology CDS 218571 218909 . - 0 ID=cds-WP_002215266.1;Parent=gene-AD853_RS04510;Dbxref=GenBank:WP_002215266.1;Name=WP_002215266.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005158316.1;locus_tag=AD853_RS04510;product=hypothetical protein;protein_id=WP_002215266.1;transl_table=11 NZ_CPUY01000003.1 RefSeq pseudogene 219019 219291 . - . ID=gene-AD853_RS20285;Name=AD853_RS20285;end_range=219291,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD853_RS20285;partial=true;pseudo=true;start_range=.,219019 NZ_CPUY01000003.1 Protein Homology CDS 219019 219291 . - 0 ID=cds-AD853_RS20285;Parent=gene-AD853_RS20285;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0006310,GO:0015074,GO:0003677;end_range=219291,.;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000051879.1;locus_tag=AD853_RS20285;partial=true;product=tyrosine-type recombinase/integrase;pseudo=true;start_range=.,219019;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 219482 219688 . + . ID=gene-AD853_RS04515;Name=AD853_RS04515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS04515;old_locus_tag=ERS008462_00910 NZ_CPUY01000003.1 Protein Homology CDS 219482 219688 . + 0 ID=cds-WP_002354559.1;Parent=gene-AD853_RS04515;Dbxref=GenBank:WP_002354559.1;Name=WP_002354559.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002354559.1;locus_tag=AD853_RS04515;product=hypothetical protein;protein_id=WP_002354559.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 219903 220055 . + . ID=gene-AD853_RS20290;Name=AD853_RS20290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS20290 NZ_CPUY01000003.1 Protein Homology CDS 219903 220055 . + 0 ID=cds-WP_012105551.1;Parent=gene-AD853_RS20290;Dbxref=GenBank:WP_012105551.1;Name=WP_012105551.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105551.1;locus_tag=AD853_RS20290;product=hypothetical protein;protein_id=WP_012105551.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 220088 220690 . + . ID=gene-AD853_RS04525;Name=AD853_RS04525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS04525;old_locus_tag=ERS008462_00912 NZ_CPUY01000003.1 Protein Homology CDS 220088 220690 . + 0 ID=cds-WP_002209770.1;Parent=gene-AD853_RS04525;Dbxref=GenBank:WP_002209770.1;Name=WP_002209770.1;Ontology_term=GO:0008654,GO:0000287,GO:0016780,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=magnesium ion binding|0000287||IEA,phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209770.1;locus_tag=AD853_RS04525;product=CDP-alcohol phosphatidyltransferase family protein;protein_id=WP_002209770.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 220683 221612 . + . ID=gene-AD853_RS04530;Name=AD853_RS04530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS04530;old_locus_tag=ERS008462_00913 NZ_CPUY01000003.1 Protein Homology CDS 220683 221612 . + 0 ID=cds-WP_011191901.1;Parent=gene-AD853_RS04530;Dbxref=GenBank:WP_011191901.1;Name=WP_011191901.1;Ontology_term=GO:0016024,GO:0004605;gbkey=CDS;go_function=phosphatidate cytidylyltransferase activity|0004605||IEA;go_process=CDP-diacylglycerol biosynthetic process|0016024||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209769.1;locus_tag=AD853_RS04530;product=phosphatidate cytidylyltransferase;protein_id=WP_011191901.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 221622 222254 . + . ID=gene-AD853_RS04535;Name=AD853_RS04535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS04535;old_locus_tag=ERS008462_00914 NZ_CPUY01000003.1 Protein Homology CDS 221622 222254 . + 0 ID=cds-WP_038824953.1;Parent=gene-AD853_RS04535;Dbxref=GenBank:WP_038824953.1;Name=WP_038824953.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209768.1;locus_tag=AD853_RS04535;product=lysophospholipid acyltransferase family protein;protein_id=WP_038824953.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 222251 224014 . + . ID=gene-AD853_RS04540;Name=AD853_RS04540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS04540;old_locus_tag=ERS008462_00915 NZ_CPUY01000003.1 Protein Homology CDS 222251 224014 . + 0 ID=cds-WP_002209767.1;Parent=gene-AD853_RS04540;Dbxref=GenBank:WP_002209767.1;Name=WP_002209767.1;Ontology_term=GO:0008168,GO:0016787,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,hydrolase activity|0016787||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304419.1;locus_tag=AD853_RS04540;product=bifunctional alpha/beta hydrolase/class I SAM-dependent methyltransferase;protein_id=WP_002209767.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 224007 225326 . + . ID=gene-AD853_RS04545;Name=AD853_RS04545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS04545;old_locus_tag=ERS008462_00916 NZ_CPUY01000003.1 Protein Homology CDS 224007 225326 . + 0 ID=cds-WP_038824954.1;Parent=gene-AD853_RS04545;Dbxref=GenBank:WP_038824954.1;Name=WP_038824954.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209766.1;locus_tag=AD853_RS04545;product=phosphatase PAP2/dual specificity phosphatase family protein;protein_id=WP_038824954.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 225308 225712 . + . ID=gene-AD853_RS04550;Name=AD853_RS04550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS04550;old_locus_tag=ERS008462_00917 NZ_CPUY01000003.1 Protein Homology CDS 225308 225712 . + 0 ID=cds-WP_012105548.1;Parent=gene-AD853_RS04550;Dbxref=GenBank:WP_012105548.1;Name=WP_012105548.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105548.1;locus_tag=AD853_RS04550;product=hypothetical protein;protein_id=WP_012105548.1;transl_table=11 NZ_CPUY01000003.1 RefSeq pseudogene 225667 225816 . + . ID=gene-AD853_RS20295;Name=AD853_RS20295;end_range=225816,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD853_RS20295;partial=true;pseudo=true NZ_CPUY01000003.1 Protein Homology CDS 225667 225816 . + 0 ID=cds-AD853_RS20295;Parent=gene-AD853_RS20295;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=225816,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012822466.1;locus_tag=AD853_RS20295;partial=true;product=Fic family protein;pseudo=true;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 226006 226557 . + . ID=gene-AD853_RS04555;Name=AD853_RS04555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS04555;old_locus_tag=ERS008462_00918 NZ_CPUY01000003.1 Protein Homology CDS 226006 226557 . + 0 ID=cds-WP_049756386.1;Parent=gene-AD853_RS04555;Dbxref=GenBank:WP_049756386.1;Name=WP_049756386.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019083541.1;locus_tag=AD853_RS04555;product=hypothetical protein;protein_id=WP_049756386.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 226826 227131 . + . ID=gene-AD853_RS04560;Name=AD853_RS04560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS04560;old_locus_tag=ERS008462_00919 NZ_CPUY01000003.1 Protein Homology CDS 226826 227131 . + 0 ID=cds-WP_038824955.1;Parent=gene-AD853_RS04560;Dbxref=GenBank:WP_038824955.1;Name=WP_038824955.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002215253.1;locus_tag=AD853_RS04560;product=hypothetical protein;protein_id=WP_038824955.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 227434 228327 . + . ID=gene-AD853_RS04565;Name=AD853_RS04565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS04565;old_locus_tag=ERS008462_00920 NZ_CPUY01000003.1 Protein Homology CDS 227434 228327 . + 0 ID=cds-WP_038824957.1;Parent=gene-AD853_RS04565;Dbxref=GenBank:WP_038824957.1;Name=WP_038824957.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209764.1;locus_tag=AD853_RS04565;product=LysR family transcriptional regulator;protein_id=WP_038824957.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 228382 229371 . - . ID=gene-AD853_RS04570;Name=AD853_RS04570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS04570;old_locus_tag=ERS008462_00921 NZ_CPUY01000003.1 Protein Homology CDS 228382 229371 . - 0 ID=cds-WP_002209763.1;Parent=gene-AD853_RS04570;Dbxref=GenBank:WP_002209763.1;Name=WP_002209763.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001172283.1;locus_tag=AD853_RS04570;product=aldo/keto reductase;protein_id=WP_002209763.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 229397 230248 . - . ID=gene-AD853_RS04575;Name=AD853_RS04575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS04575;old_locus_tag=ERS008462_00922 NZ_CPUY01000003.1 Protein Homology CDS 229397 230248 . - 0 ID=cds-WP_038824958.1;Parent=gene-AD853_RS04575;Dbxref=GenBank:WP_038824958.1;Name=WP_038824958.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001195265.1;locus_tag=AD853_RS04575;product=aldo/keto reductase;protein_id=WP_038824958.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 230721 232349 . + . ID=gene-AD853_RS04590;Name=AD853_RS04590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS04590;old_locus_tag=ERS008462_00923 NZ_CPUY01000003.1 Protein Homology CDS 230721 232349 . + 0 ID=cds-WP_038824960.1;Parent=gene-AD853_RS04590;Dbxref=GenBank:WP_038824960.1;Name=WP_038824960.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011191907.1;locus_tag=AD853_RS04590;product=hypothetical protein;protein_id=WP_038824960.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 232428 234809 . - . ID=gene-AD853_RS04595;Name=AD853_RS04595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS04595;old_locus_tag=ERS008462_00924 NZ_CPUY01000003.1 Protein Homology CDS 232428 234809 . - 0 ID=cds-WP_038824961.1;Parent=gene-AD853_RS04595;Dbxref=GenBank:WP_038824961.1;Name=WP_038824961.1;Ontology_term=GO:0030245,GO:0008422;gbkey=CDS;go_function=beta-glucosidase activity|0008422||IEA;go_process=cellulose catabolic process|0030245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002228358.1;locus_tag=AD853_RS04595;product=beta-glucosidase;protein_id=WP_038824961.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 234965 235495 . - . ID=gene-AD853_RS04600;Name=AD853_RS04600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS04600;old_locus_tag=ERS008462_00925 NZ_CPUY01000003.1 Protein Homology CDS 234965 235495 . - 0 ID=cds-WP_011191909.1;Parent=gene-AD853_RS04600;Dbxref=GenBank:WP_011191909.1;Name=WP_011191909.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002359855.1;locus_tag=AD853_RS04600;product=GDYXXLXY domain-containing protein;protein_id=WP_011191909.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 235488 237695 . - . ID=gene-AD853_RS04605;Name=AD853_RS04605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS04605;old_locus_tag=ERS008462_00926 NZ_CPUY01000003.1 Protein Homology CDS 235488 237695 . - 0 ID=cds-WP_038824963.1;Parent=gene-AD853_RS04605;Dbxref=GenBank:WP_038824963.1;Name=WP_038824963.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016603439.1;locus_tag=AD853_RS04605;product=DUF4401 domain-containing protein;protein_id=WP_038824963.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 238079 238951 . + . ID=gene-AD853_RS04610;Name=rluF;gbkey=Gene;gene=rluF;gene_biotype=protein_coding;locus_tag=AD853_RS04610;old_locus_tag=ERS008462_00927 NZ_CPUY01000003.1 Protein Homology CDS 238079 238951 . + 0 ID=cds-WP_011191911.1;Parent=gene-AD853_RS04610;Dbxref=GenBank:WP_011191911.1;Name=WP_011191911.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;gene=rluF;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013511642.1;locus_tag=AD853_RS04610;product=23S rRNA pseudouridine(2604) synthase RluF;protein_id=WP_011191911.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 239176 240297 . + . ID=gene-AD853_RS04615;Name=AD853_RS04615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS04615;old_locus_tag=ERS008462_00928 NZ_CPUY01000003.1 Protein Homology CDS 239176 240297 . + 0 ID=cds-WP_038824816.1;Parent=gene-AD853_RS04615;Dbxref=GenBank:WP_038824816.1;Name=WP_038824816.1;Ontology_term=GO:0043687,GO:0008198,GO:0016706;gbkey=CDS;go_function=ferrous iron binding|0008198||IEA,2-oxoglutarate-dependent dioxygenase activity|0016706||IEA;go_process=post-translational protein modification|0043687||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224890.1;locus_tag=AD853_RS04615;product=ribosomal protein uL16 3-hydroxylase;protein_id=WP_038824816.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 240312 240893 . - . ID=gene-AD853_RS04620;Name=AD853_RS04620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS04620;old_locus_tag=ERS008462_00929 NZ_CPUY01000003.1 Protein Homology CDS 240312 240893 . - 0 ID=cds-WP_038824814.1;Parent=gene-AD853_RS04620;Dbxref=GenBank:WP_038824814.1;Name=WP_038824814.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209753.1;locus_tag=AD853_RS04620;product=AbiEi antitoxin N-terminal domain-containing protein;protein_id=WP_038824814.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 241242 243158 . - . ID=gene-AD853_RS04625;Name=yapC;gbkey=Gene;gene=yapC;gene_biotype=protein_coding;locus_tag=AD853_RS04625;old_locus_tag=ERS008462_00930 NZ_CPUY01000003.1 Protein Homology CDS 241242 243158 . - 0 ID=cds-WP_038824813.1;Parent=gene-AD853_RS04625;Dbxref=GenBank:WP_038824813.1;Name=WP_038824813.1;gbkey=CDS;gene=yapC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209752.1;locus_tag=AD853_RS04625;product=autotransporter adhesin YapC;protein_id=WP_038824813.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 243968 244207 . + . ID=gene-AD853_RS04630;Name=AD853_RS04630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS04630;old_locus_tag=ERS008462_00931 NZ_CPUY01000003.1 Protein Homology CDS 243968 244207 . + 0 ID=cds-WP_002209751.1;Parent=gene-AD853_RS04630;Dbxref=GenBank:WP_002209751.1;Name=WP_002209751.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209751.1;locus_tag=AD853_RS04630;product=hypothetical protein;protein_id=WP_002209751.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 244246 244497 . + . ID=gene-AD853_RS04635;Name=AD853_RS04635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS04635;old_locus_tag=ERS008462_00932 NZ_CPUY01000003.1 Protein Homology CDS 244246 244497 . + 0 ID=cds-WP_012105539.1;Parent=gene-AD853_RS04635;Dbxref=GenBank:WP_012105539.1;Name=WP_012105539.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011191914.1;locus_tag=AD853_RS04635;product=hypothetical protein;protein_id=WP_012105539.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 244521 245000 . + . ID=gene-AD853_RS04640;Name=AD853_RS04640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS04640;old_locus_tag=ERS008462_00933 NZ_CPUY01000003.1 Protein Homology CDS 244521 245000 . + 0 ID=cds-WP_011191915.1;Parent=gene-AD853_RS04640;Dbxref=GenBank:WP_011191915.1;Name=WP_011191915.1;Ontology_term=GO:0033103;gbkey=CDS;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011191915.1;locus_tag=AD853_RS04640;product=Hcp family type VI secretion system effector;protein_id=WP_011191915.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 245105 245506 . - . ID=gene-AD853_RS04645;Name=AD853_RS04645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS04645;old_locus_tag=ERS008462_00934 NZ_CPUY01000003.1 Protein Homology CDS 245105 245506 . - 0 ID=cds-WP_038824811.1;Parent=gene-AD853_RS04645;Dbxref=GenBank:WP_038824811.1;Name=WP_038824811.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209746.1;locus_tag=AD853_RS04645;product=DUF1240 domain-containing protein;protein_id=WP_038824811.1;transl_table=11 NZ_CPUY01000003.1 RefSeq pseudogene 245499 246349 . - . ID=gene-AD853_RS04650;Name=AD853_RS04650;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD853_RS04650;old_locus_tag=ERS008462_00935;pseudo=true NZ_CPUY01000003.1 Protein Homology CDS 245499 246349 . - 0 ID=cds-AD853_RS04650;Parent=gene-AD853_RS04650;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015841646.1;locus_tag=AD853_RS04650;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 247017 247319 . + . ID=gene-AD853_RS04655;Name=AD853_RS04655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS04655;old_locus_tag=ERS008462_00938 NZ_CPUY01000003.1 Protein Homology CDS 247017 247319 . + 0 ID=cds-WP_050124571.1;Parent=gene-AD853_RS04655;Dbxref=GenBank:WP_050124571.1;Name=WP_050124571.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209745.1;locus_tag=AD853_RS04655;product=helix-turn-helix domain-containing protein;protein_id=WP_050124571.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 247475 249838 . - . ID=gene-AD853_RS04660;Name=pbpC;gbkey=Gene;gene=pbpC;gene_biotype=protein_coding;locus_tag=AD853_RS04660;old_locus_tag=ERS008462_00939 NZ_CPUY01000003.1 Protein Homology CDS 247475 249838 . - 0 ID=cds-WP_038825569.1;Parent=gene-AD853_RS04660;Dbxref=GenBank:WP_038825569.1;Name=WP_038825569.1;Ontology_term=GO:0009252,GO:0003824,GO:0009274;gbkey=CDS;gene=pbpC;go_component=peptidoglycan-based cell wall|0009274||IEA;go_function=catalytic activity|0003824||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012413535.1;locus_tag=AD853_RS04660;product=penicillin-binding protein 1C;protein_id=WP_038825569.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 249895 255873 . - . ID=gene-AD853_RS04665;Name=AD853_RS04665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS04665;old_locus_tag=ERS008462_00940 NZ_CPUY01000003.1 Protein Homology CDS 249895 255873 . - 0 ID=cds-WP_038824808.1;Parent=gene-AD853_RS04665;Dbxref=GenBank:WP_038824808.1;Name=WP_038824808.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016582332.1;locus_tag=AD853_RS04665;product=alpha-2-macroglobulin;protein_id=WP_038824808.1;transl_table=11 NZ_CPUY01000003.1 RefSeq pseudogene 256282 256829 . - . ID=gene-AD853_RS04670;Name=AD853_RS04670;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD853_RS04670;pseudo=true NZ_CPUY01000003.1 Protein Homology CDS 256282 256829 . - 0 ID=cds-AD853_RS04670;Parent=gene-AD853_RS04670;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002214718.1;locus_tag=AD853_RS04670;product=YagU family protein;pseudo=true;transl_table=11 NZ_CPUY01000003.1 RefSeq pseudogene 257017 257213 . + . ID=gene-AD853_RS22445;Name=AD853_RS22445;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD853_RS22445;pseudo=true NZ_CPUY01000003.1 Protein Homology CDS 257017 257213 . + 0 ID=cds-AD853_RS22445;Parent=gene-AD853_RS22445;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210295.1;locus_tag=AD853_RS22445;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 257280 258134 . - . ID=gene-AD853_RS04675;Name=AD853_RS04675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS04675;old_locus_tag=ERS008462_00944 NZ_CPUY01000003.1 Protein Homology CDS 257280 258134 . - 0 ID=cds-WP_012304405.1;Parent=gene-AD853_RS04675;Dbxref=GenBank:WP_012304405.1;Name=WP_012304405.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304405.1;locus_tag=AD853_RS04675;product=MurR/RpiR family transcriptional regulator;protein_id=WP_012304405.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 258476 260002 . + . ID=gene-AD853_RS04680;Name=AD853_RS04680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS04680;old_locus_tag=ERS008462_00945 NZ_CPUY01000003.1 Protein Homology CDS 258476 260002 . + 0 ID=cds-WP_012304403.1;Parent=gene-AD853_RS04680;Dbxref=GenBank:WP_012304403.1;Name=WP_012304403.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210297.1;locus_tag=AD853_RS04680;product=CoA-acylating methylmalonate-semialdehyde dehydrogenase;protein_id=WP_012304403.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 260037 261962 . + . ID=gene-AD853_RS04685;Name=iolD;gbkey=Gene;gene=iolD;gene_biotype=protein_coding;locus_tag=AD853_RS04685;old_locus_tag=ERS008462_00946 NZ_CPUY01000003.1 Protein Homology CDS 260037 261962 . + 0 ID=cds-WP_038824818.1;Parent=gene-AD853_RS04685;Dbxref=GenBank:WP_038824818.1;Name=WP_038824818.1;Ontology_term=GO:0019310,GO:0016823,GO:0030976;gbkey=CDS;gene=iolD;go_function=hydrolase activity%2C acting on acid carbon-carbon bonds%2C in ketonic substances|0016823||IEA,thiamine pyrophosphate binding|0030976||IEA;go_process=inositol catabolic process|0019310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001192846.1;locus_tag=AD853_RS04685;product=3D-(3%2C5/4)-trihydroxycyclohexane-1%2C2-dione acylhydrolase (decyclizing);protein_id=WP_038824818.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 262256 263242 . + . ID=gene-AD853_RS04690;Name=iolG;gbkey=Gene;gene=iolG;gene_biotype=protein_coding;locus_tag=AD853_RS04690;old_locus_tag=ERS008462_00947 NZ_CPUY01000003.1 Protein Homology CDS 262256 263242 . + 0 ID=cds-WP_011191920.1;Parent=gene-AD853_RS04690;Dbxref=GenBank:WP_011191920.1;Name=WP_011191920.1;Ontology_term=GO:0019310,GO:0050112;gbkey=CDS;gene=iolG;go_function=inositol 2-dehydrogenase (NAD+) activity|0050112||IEA;go_process=inositol catabolic process|0019310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012134755.1;locus_tag=AD853_RS04690;product=inositol 2-dehydrogenase;protein_id=WP_011191920.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 263332 264261 . + . ID=gene-AD853_RS04695;Name=AD853_RS04695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS04695;old_locus_tag=ERS008462_00948 NZ_CPUY01000003.1 Protein Homology CDS 263332 264261 . + 0 ID=cds-WP_002210300.1;Parent=gene-AD853_RS04695;Dbxref=GenBank:WP_002210300.1;Name=WP_002210300.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304400.1;locus_tag=AD853_RS04695;product=substrate-binding domain-containing protein;protein_id=WP_002210300.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 264310 265857 . + . ID=gene-AD853_RS04700;Name=AD853_RS04700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS04700;old_locus_tag=ERS008462_00949 NZ_CPUY01000003.1 Protein Homology CDS 264310 265857 . + 0 ID=cds-WP_012105532.1;Parent=gene-AD853_RS04700;Dbxref=GenBank:WP_012105532.1;Name=WP_012105532.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020883046.1;locus_tag=AD853_RS04700;product=sugar ABC transporter ATP-binding protein;protein_id=WP_012105532.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 265869 266897 . + . ID=gene-AD853_RS04705;Name=AD853_RS04705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS04705;old_locus_tag=ERS008462_00950 NZ_CPUY01000003.1 Protein Homology CDS 265869 266897 . + 0 ID=cds-WP_002210302.1;Parent=gene-AD853_RS04705;Dbxref=GenBank:WP_002210302.1;Name=WP_002210302.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003826102.1;locus_tag=AD853_RS04705;product=ABC transporter permease;protein_id=WP_002210302.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 266921 268054 . + . ID=gene-AD853_RS04710;Name=AD853_RS04710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS04710;old_locus_tag=ERS008462_00951 NZ_CPUY01000003.1 Protein Homology CDS 266921 268054 . + 0 ID=cds-WP_012105531.1;Parent=gene-AD853_RS04710;Dbxref=GenBank:WP_012105531.1;Name=WP_012105531.1;Ontology_term=GO:0000166,GO:0003824;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011906367.1;locus_tag=AD853_RS04710;product=Gfo/Idh/MocA family protein;protein_id=WP_012105531.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 268086 270056 . + . ID=gene-AD853_RS04715;Name=AD853_RS04715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS04715;old_locus_tag=ERS008462_00952 NZ_CPUY01000003.1 Protein Homology CDS 268086 270056 . + 0 ID=cds-WP_071990082.1;Parent=gene-AD853_RS04715;Dbxref=GenBank:WP_071990082.1;Name=WP_071990082.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304398.1;locus_tag=AD853_RS04715;product=bifunctional 5-dehydro-2-deoxygluconokinase/5-dehydro-2-deoxyphosphogluconate aldolase;protein_id=WP_071990082.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 270071 271129 . + . ID=gene-AD853_RS04720;Name=iolE;gbkey=Gene;gene=iolE;gene_biotype=protein_coding;locus_tag=AD853_RS04720;old_locus_tag=ERS008462_00953 NZ_CPUY01000003.1 Protein Homology CDS 270071 271129 . + 0 ID=cds-WP_190947797.1;Parent=gene-AD853_RS04720;Dbxref=GenBank:WP_190947797.1;Name=WP_190947797.1;Ontology_term=GO:0019310,GO:0050114;gbkey=CDS;gene=iolE;go_function=myo-inosose-2 dehydratase activity|0050114||IEA;go_process=inositol catabolic process|0019310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002214721.1;locus_tag=AD853_RS04720;product=myo-inosose-2 dehydratase;protein_id=WP_190947797.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 271139 271954 . + . ID=gene-AD853_RS04725;Name=iolB;gbkey=Gene;gene=iolB;gene_biotype=protein_coding;locus_tag=AD853_RS04725;old_locus_tag=ERS008462_00954 NZ_CPUY01000003.1 Protein Homology CDS 271139 271954 . + 0 ID=cds-WP_011191925.1;Parent=gene-AD853_RS04725;Dbxref=GenBank:WP_011191925.1;Name=WP_011191925.1;Ontology_term=GO:0019310,GO:0016861;gbkey=CDS;gene=iolB;go_function=intramolecular oxidoreductase activity%2C interconverting aldoses and ketoses|0016861||IEA;go_process=inositol catabolic process|0019310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011191925.1;locus_tag=AD853_RS04725;product=5-deoxy-glucuronate isomerase;protein_id=WP_011191925.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 272157 272459 . - . ID=gene-AD853_RS20300;Name=AD853_RS20300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS20300 NZ_CPUY01000003.1 Protein Homology CDS 272157 272459 . - 0 ID=cds-WP_011191926.1;Parent=gene-AD853_RS20300;Dbxref=GenBank:WP_011191926.1;Name=WP_011191926.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011191926.1;locus_tag=AD853_RS20300;product=hypothetical protein;protein_id=WP_011191926.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 272524 274314 . + . ID=gene-AD853_RS04735;Name=AD853_RS04735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS04735;old_locus_tag=ERS008462_00956 NZ_CPUY01000003.1 Protein Homology CDS 272524 274314 . + 0 ID=cds-WP_038824805.1;Parent=gene-AD853_RS04735;Dbxref=GenBank:WP_038824805.1;Name=WP_038824805.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105529.1;locus_tag=AD853_RS04735;product=ABCB family ABC transporter ATP-binding protein/permease;protein_id=WP_038824805.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 274330 274617 . - . ID=gene-AD853_RS04740;Name=AD853_RS04740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS04740;old_locus_tag=ERS008462_00957 NZ_CPUY01000003.1 Protein Homology CDS 274330 274617 . - 0 ID=cds-WP_012304396.1;Parent=gene-AD853_RS04740;Dbxref=GenBank:WP_012304396.1;Name=WP_012304396.1;Ontology_term=GO:0017000,GO:0004497,GO:0016491;gbkey=CDS;go_function=monooxygenase activity|0004497||IEA,oxidoreductase activity|0016491||IEA;go_process=antibiotic biosynthetic process|0017000||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210309.1;locus_tag=AD853_RS04740;product=putative quinol monooxygenase;protein_id=WP_012304396.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 275060 275254 . + . ID=gene-AD853_RS04745;Name=AD853_RS04745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS04745;old_locus_tag=ERS008462_00958 NZ_CPUY01000003.1 Protein Homology CDS 275060 275254 . + 0 ID=cds-WP_012105528.1;Parent=gene-AD853_RS04745;Dbxref=GenBank:WP_012105528.1;Name=WP_012105528.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105528.1;locus_tag=AD853_RS04745;product=glycogen synthase;protein_id=WP_012105528.1;transl_table=11 NZ_CPUY01000003.1 RefSeq pseudogene 275272 275451 . - . ID=gene-AD853_RS04750;Name=AD853_RS04750;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD853_RS04750;pseudo=true NZ_CPUY01000003.1 Protein Homology CDS 275272 275451 . - 0 ID=cds-AD853_RS04750;Parent=gene-AD853_RS04750;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210311.1;locus_tag=AD853_RS04750;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 275633 276598 . - . ID=gene-AD853_RS04755;Name=AD853_RS04755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS04755;old_locus_tag=ERS008462_00959 NZ_CPUY01000003.1 Protein Homology CDS 275633 276598 . - 0 ID=cds-WP_038824804.1;Parent=gene-AD853_RS04755;Dbxref=GenBank:WP_038824804.1;Name=WP_038824804.1;Ontology_term=GO:0016413,GO:0016747;gbkey=CDS;go_function=O-acetyltransferase activity|0016413||IEA,acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004700834.1;locus_tag=AD853_RS04755;product=acyltransferase;protein_id=WP_038824804.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 277048 277638 . + . ID=gene-AD853_RS04760;Name=AD853_RS04760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS04760;old_locus_tag=ERS008462_00960 NZ_CPUY01000003.1 Protein Homology CDS 277048 277638 . + 0 ID=cds-WP_002210313.1;Parent=gene-AD853_RS04760;Dbxref=GenBank:WP_002210313.1;Name=WP_002210313.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019081202.1;locus_tag=AD853_RS04760;product=helix-turn-helix transcriptional regulator;protein_id=WP_002210313.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 277908 278387 . - . ID=gene-AD853_RS04765;Name=AD853_RS04765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS04765;old_locus_tag=ERS008462_00961 NZ_CPUY01000003.1 Protein Homology CDS 277908 278387 . - 0 ID=cds-WP_012304395.1;Parent=gene-AD853_RS04765;Dbxref=GenBank:WP_012304395.1;Name=WP_012304395.1;Ontology_term=GO:0003676;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004700830.1;locus_tag=AD853_RS04765;product=cold-shock protein;protein_id=WP_012304395.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 278666 278875 . + . ID=gene-AD853_RS04770;Name=cspE;gbkey=Gene;gene=cspE;gene_biotype=protein_coding;gene_synonym=gicA,msmC;locus_tag=AD853_RS04770 NZ_CPUY01000003.1 Protein Homology CDS 278666 278875 . + 0 ID=cds-WP_002210315.1;Parent=gene-AD853_RS04770;Dbxref=GenBank:WP_002210315.1;Name=WP_002210315.1;Ontology_term=GO:0031564,GO:0001072,GO:0003697,GO:0003723;gbkey=CDS;gene=cspE;go_function=transcription antitermination factor activity%2C RNA binding|0001072||IEA,single-stranded DNA binding|0003697||IEA,RNA binding|0003723||IEA;go_process=transcription antitermination|0031564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225795.1;locus_tag=AD853_RS04770;product=transcription antiterminator/RNA stability regulator CspE;protein_id=WP_002210315.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 279298 279681 . - . ID=gene-AD853_RS04775;Name=crcB;gbkey=Gene;gene=crcB;gene_biotype=protein_coding;locus_tag=AD853_RS04775;old_locus_tag=ERS008462_00963 NZ_CPUY01000003.1 Protein Homology CDS 279298 279681 . - 0 ID=cds-WP_012105525.1;Parent=gene-AD853_RS04775;Dbxref=GenBank:WP_012105525.1;Name=WP_012105525.1;Ontology_term=GO:0016020;gbkey=CDS;gene=crcB;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015683984.1;locus_tag=AD853_RS04775;product=fluoride efflux transporter CrcB;protein_id=WP_012105525.1;transl_table=11 NZ_CPUY01000003.1 cmsearch riboswitch 279782 279845 . - . ID=id-NZ_CPUY01000003.1:279782..279845;Dbxref=RFAM:RF01734;Note=Fluoride riboswitches increase expression of downstream genes that help mitigate the toxic effects of very high levels of fluoride%3B They are found in a wide variety of bacteria and archaea;bound_moiety=fluoride;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_CPUY01000003.1 RefSeq gene 280248 280505 . + . ID=gene-AD853_RS04785;Name=tatA;gbkey=Gene;gene=tatA;gene_biotype=protein_coding;locus_tag=AD853_RS04785;old_locus_tag=ERS008462_00964 NZ_CPUY01000003.1 Protein Homology CDS 280248 280505 . + 0 ID=cds-WP_002210319.1;Parent=gene-AD853_RS04785;Dbxref=GenBank:WP_002210319.1;Name=WP_002210319.1;gbkey=CDS;gene=tatA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210319.1;locus_tag=AD853_RS04785;product=Sec-independent protein translocase subunit TatA;protein_id=WP_002210319.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 280686 281651 . - . ID=gene-AD853_RS04790;Name=lipA;gbkey=Gene;gene=lipA;gene_biotype=protein_coding;locus_tag=AD853_RS04790;old_locus_tag=ERS008462_00965 NZ_CPUY01000003.1 Protein Homology CDS 280686 281651 . - 0 ID=cds-WP_002210320.1;Parent=gene-AD853_RS04790;Dbxref=GenBank:WP_002210320.1;Name=WP_002210320.1;Ontology_term=GO:0009107,GO:0016992,GO:0051539,GO:1904047;gbkey=CDS;gene=lipA;go_function=lipoate synthase activity|0016992||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=lipoate biosynthetic process|0009107||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012904980.1;locus_tag=AD853_RS04790;product=lipoyl synthase;protein_id=WP_002210320.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 281844 282545 . - . ID=gene-AD853_RS04795;Name=lipB;gbkey=Gene;gene=lipB;gene_biotype=protein_coding;locus_tag=AD853_RS04795;old_locus_tag=ERS008462_00966 NZ_CPUY01000003.1 Protein Homology CDS 281844 282545 . - 0 ID=cds-WP_002218201.1;Parent=gene-AD853_RS04795;Dbxref=GenBank:WP_002218201.1;Name=WP_002218201.1;Ontology_term=GO:0009249,GO:0033819;gbkey=CDS;gene=lipB;go_function=lipoyl(octanoyl) transferase activity|0033819||IEA;go_process=protein lipoylation|0009249||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304393.1;locus_tag=AD853_RS04795;product=lipoyl(octanoyl) transferase LipB;protein_id=WP_002218201.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 282757 283020 . - . ID=gene-AD853_RS04800;Name=ybeD;gbkey=Gene;gene=ybeD;gene_biotype=protein_coding;locus_tag=AD853_RS04800;old_locus_tag=ERS008462_00967 NZ_CPUY01000003.1 Protein Homology CDS 282757 283020 . - 0 ID=cds-WP_038824258.1;Parent=gene-AD853_RS04800;Dbxref=GenBank:WP_038824258.1;Name=WP_038824258.1;gbkey=CDS;gene=ybeD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459628.1;locus_tag=AD853_RS04800;product=DUF493 family protein YbeD;protein_id=WP_038824258.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 283218 284420 . - . ID=gene-AD853_RS04805;Name=dacA;gbkey=Gene;gene=dacA;gene_biotype=protein_coding;locus_tag=AD853_RS04805;old_locus_tag=ERS008462_00968 NZ_CPUY01000003.1 Protein Homology CDS 283218 284420 . - 0 ID=cds-WP_002210323.1;Parent=gene-AD853_RS04805;Dbxref=GenBank:WP_002210323.1;Name=WP_002210323.1;Ontology_term=GO:0006508,GO:0009002;gbkey=CDS;gene=dacA;go_function=serine-type D-Ala-D-Ala carboxypeptidase activity|0009002||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210323.1;locus_tag=AD853_RS04805;product=D-alanyl-D-alanine carboxypeptidase DacA;protein_id=WP_002210323.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 284823 285905 . - . ID=gene-AD853_RS04810;Name=rlpA;gbkey=Gene;gene=rlpA;gene_biotype=protein_coding;locus_tag=AD853_RS04810;old_locus_tag=ERS008462_00969 NZ_CPUY01000003.1 Protein Homology CDS 284823 285905 . - 0 ID=cds-WP_002210324.1;Parent=gene-AD853_RS04810;Dbxref=GenBank:WP_002210324.1;Name=WP_002210324.1;Ontology_term=GO:0042834;gbkey=CDS;gene=rlpA;go_function=peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012413541.1;locus_tag=AD853_RS04810;product=endolytic peptidoglycan transglycosylase RlpA;protein_id=WP_002210324.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 285915 287027 . - . ID=gene-AD853_RS04815;Name=mrdB;gbkey=Gene;gene=mrdB;gene_biotype=protein_coding;gene_synonym=rodA;locus_tag=AD853_RS04815;old_locus_tag=ERS008462_00970 NZ_CPUY01000003.1 Protein Homology CDS 285915 287027 . - 0 ID=cds-WP_002210325.1;Parent=gene-AD853_RS04815;Dbxref=GenBank:WP_002210325.1;Name=WP_002210325.1;Note=rod shape-determining protein RodA;gbkey=CDS;gene=mrdB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308699.1;locus_tag=AD853_RS04815;product=peptidoglycan glycosyltransferase MrdB;protein_id=WP_002210325.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 287198 289093 . - . ID=gene-AD853_RS04820;Name=mrdA;gbkey=Gene;gene=mrdA;gene_biotype=protein_coding;locus_tag=AD853_RS04820;old_locus_tag=ERS008462_00971 NZ_CPUY01000003.1 Protein Homology CDS 287198 289093 . - 0 ID=cds-WP_012304391.1;Parent=gene-AD853_RS04820;Dbxref=GenBank:WP_012304391.1;Name=WP_012304391.1;Ontology_term=GO:0009252,GO:0008658,GO:0009002,GO:0016020;gbkey=CDS;gene=mrdA;go_component=membrane|0016020||IEA;go_function=penicillin binding|0008658||IEA,serine-type D-Ala-D-Ala carboxypeptidase activity|0009002||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015683709.1;locus_tag=AD853_RS04820;product=peptidoglycan DD-transpeptidase MrdA;protein_id=WP_012304391.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 289175 289645 . - . ID=gene-AD853_RS04825;Name=rlmH;gbkey=Gene;gene=rlmH;gene_biotype=protein_coding;locus_tag=AD853_RS04825;old_locus_tag=ERS008462_00972 NZ_CPUY01000003.1 Protein Homology CDS 289175 289645 . - 0 ID=cds-WP_002210328.1;Parent=gene-AD853_RS04825;Dbxref=GenBank:WP_002210328.1;Name=WP_002210328.1;Ontology_term=GO:0006364,GO:0008168;gbkey=CDS;gene=rlmH;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016245807.1;locus_tag=AD853_RS04825;product=23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH;protein_id=WP_002210328.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 289649 289966 . - . ID=gene-AD853_RS04830;Name=rsfS;gbkey=Gene;gene=rsfS;gene_biotype=protein_coding;locus_tag=AD853_RS04830;old_locus_tag=ERS008462_00973 NZ_CPUY01000003.1 Protein Homology CDS 289649 289966 . - 0 ID=cds-WP_002210329.1;Parent=gene-AD853_RS04830;Dbxref=GenBank:WP_002210329.1;Name=WP_002210329.1;Ontology_term=GO:0017148,GO:0043022;gbkey=CDS;gene=rsfS;go_function=ribosome binding|0043022||IEA;go_process=negative regulation of translation|0017148||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007373852.1;locus_tag=AD853_RS04830;product=ribosome silencing factor;protein_id=WP_002210329.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 290189 290851 . - . ID=gene-AD853_RS04835;Name=nadD;gbkey=Gene;gene=nadD;gene_biotype=protein_coding;locus_tag=AD853_RS04835;old_locus_tag=ERS008462_00974 NZ_CPUY01000003.1 Protein Homology CDS 290189 290851 . - 0 ID=cds-WP_002210330.1;Parent=gene-AD853_RS04835;Dbxref=GenBank:WP_002210330.1;Name=WP_002210330.1;Ontology_term=GO:0009435,GO:0016779;gbkey=CDS;gene=nadD;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=NAD+ biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210330.1;locus_tag=AD853_RS04835;product=nicotinate-nucleotide adenylyltransferase;protein_id=WP_002210330.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 290841 291875 . - . ID=gene-AD853_RS04840;Name=holA;gbkey=Gene;gene=holA;gene_biotype=protein_coding;locus_tag=AD853_RS04840;old_locus_tag=ERS008462_00975 NZ_CPUY01000003.1 Protein Homology CDS 290841 291875 . - 0 ID=cds-WP_002210331.1;Parent=gene-AD853_RS04840;Dbxref=GenBank:WP_002210331.1;Name=WP_002210331.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887;gbkey=CDS;gene=holA;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210331.1;locus_tag=AD853_RS04840;product=DNA polymerase III subunit delta;protein_id=WP_002210331.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 291872 292495 . - . ID=gene-AD853_RS04845;Name=lptE;gbkey=Gene;gene=lptE;gene_biotype=protein_coding;locus_tag=AD853_RS04845;old_locus_tag=ERS008462_00976 NZ_CPUY01000003.1 Protein Homology CDS 291872 292495 . - 0 ID=cds-WP_002210332.1;Parent=gene-AD853_RS04845;Dbxref=GenBank:WP_002210332.1;Name=WP_002210332.1;Ontology_term=GO:0043165,GO:0019867;gbkey=CDS;gene=lptE;go_component=outer membrane|0019867||IEA;go_process=Gram-negative-bacterium-type cell outer membrane assembly|0043165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019081195.1;locus_tag=AD853_RS04845;product=LPS assembly lipoprotein LptE;protein_id=WP_002210332.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 292510 295092 . - . ID=gene-AD853_RS04850;Name=leuS;gbkey=Gene;gene=leuS;gene_biotype=protein_coding;locus_tag=AD853_RS04850;old_locus_tag=ERS008462_00977 NZ_CPUY01000003.1 Protein Homology CDS 292510 295092 . - 0 ID=cds-WP_002210333.1;Parent=gene-AD853_RS04850;Dbxref=GenBank:WP_002210333.1;Name=WP_002210333.1;Ontology_term=GO:0006429,GO:0000166,GO:0004823,GO:0005524;gbkey=CDS;gene=leuS;go_function=nucleotide binding|0000166||IEA,leucine-tRNA ligase activity|0004823||IEA,ATP binding|0005524||IEA;go_process=leucyl-tRNA aminoacylation|0006429||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008456064.1;locus_tag=AD853_RS04850;product=leucine--tRNA ligase;protein_id=WP_002210333.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 295354 295836 . + . ID=gene-AD853_RS04855;Name=AD853_RS04855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS04855;old_locus_tag=ERS008462_00978 NZ_CPUY01000003.1 Protein Homology CDS 295354 295836 . + 0 ID=cds-WP_002210335.1;Parent=gene-AD853_RS04855;Dbxref=GenBank:WP_002210335.1;Name=WP_002210335.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459645.1;locus_tag=AD853_RS04855;product=zinc ribbon-containing protein;protein_id=WP_002210335.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 295971 296696 . - . ID=gene-AD853_RS04860;Name=AD853_RS04860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS04860;old_locus_tag=ERS008462_00979 NZ_CPUY01000003.1 Protein Homology CDS 295971 296696 . - 0 ID=cds-WP_002210336.1;Parent=gene-AD853_RS04860;Dbxref=GenBank:WP_002210336.1;Name=WP_002210336.1;Ontology_term=GO:0005524,GO:0015424,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ABC-type amino acid transporter activity|0015424||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020245804.1;locus_tag=AD853_RS04860;product=amino acid ABC transporter ATP-binding protein;protein_id=WP_002210336.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 296696 297370 . - . ID=gene-AD853_RS04865;Name=gltK;gbkey=Gene;gene=gltK;gene_biotype=protein_coding;locus_tag=AD853_RS04865;old_locus_tag=ERS008462_00980 NZ_CPUY01000003.1 Protein Homology CDS 296696 297370 . - 0 ID=cds-WP_002210337.1;Parent=gene-AD853_RS04865;Dbxref=GenBank:WP_002210337.1;Name=WP_002210337.1;gbkey=CDS;gene=gltK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459655.1;locus_tag=AD853_RS04865;product=glutamate/aspartate ABC transporter permease GltK;protein_id=WP_002210337.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 297370 298110 . - . ID=gene-AD853_RS04870;Name=AD853_RS04870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS04870;old_locus_tag=ERS008462_00981 NZ_CPUY01000003.1 Protein Homology CDS 297370 298110 . - 0 ID=cds-WP_002223337.1;Parent=gene-AD853_RS04870;Dbxref=GenBank:WP_002223337.1;Name=WP_002223337.1;Ontology_term=GO:0006865,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015698156.1;locus_tag=AD853_RS04870;product=amino acid ABC transporter permease;protein_id=WP_002223337.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 298284 299201 . - . ID=gene-AD853_RS04875;Name=AD853_RS04875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS04875;old_locus_tag=ERS008462_00982 NZ_CPUY01000003.1 Protein Homology CDS 298284 299201 . - 0 ID=cds-WP_002210339.1;Parent=gene-AD853_RS04875;Dbxref=GenBank:WP_002210339.1;Name=WP_002210339.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225821.1;locus_tag=AD853_RS04875;product=amino acid ABC transporter substrate-binding protein;protein_id=WP_002210339.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 299966 301513 . - . ID=gene-AD853_RS04880;Name=lnt;gbkey=Gene;gene=lnt;gene_biotype=protein_coding;locus_tag=AD853_RS04880;old_locus_tag=ERS008462_00983 NZ_CPUY01000003.1 Protein Homology CDS 299966 301513 . - 0 ID=cds-WP_038824257.1;Parent=gene-AD853_RS04880;Dbxref=GenBank:WP_038824257.1;Name=WP_038824257.1;Ontology_term=GO:0042158,GO:0016410,GO:0016020;gbkey=CDS;gene=lnt;go_component=membrane|0016020||IEA;go_function=N-acyltransferase activity|0016410||IEA;go_process=lipoprotein biosynthetic process|0042158||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210341.1;locus_tag=AD853_RS04880;product=apolipoprotein N-acyltransferase;protein_id=WP_038824257.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 301521 302399 . - . ID=gene-AD853_RS04885;Name=corC;gbkey=Gene;gene=corC;gene_biotype=protein_coding;locus_tag=AD853_RS04885;old_locus_tag=ERS008462_00984 NZ_CPUY01000003.1 Protein Homology CDS 301521 302399 . - 0 ID=cds-WP_002210342.1;Parent=gene-AD853_RS04885;Dbxref=GenBank:WP_002210342.1;Name=WP_002210342.1;Note=CorC(YbeX) belongs to the Cyclin M Mg2+ Exporter (CNNM) family%2C and was characterized as belonging to a set of three proteins%2C at least one of which must be present for CorA to function.;Ontology_term=GO:0050660;gbkey=CDS;gene=corC;go_function=flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210342.1;locus_tag=AD853_RS04885;product=CNNM family magnesium/cobalt transport protein CorC;protein_id=WP_002210342.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 302517 302990 . - . ID=gene-AD853_RS04890;Name=ybeY;gbkey=Gene;gene=ybeY;gene_biotype=protein_coding;locus_tag=AD853_RS04890;old_locus_tag=ERS008462_00985 NZ_CPUY01000003.1 Protein Homology CDS 302517 302990 . - 0 ID=cds-WP_011191934.1;Parent=gene-AD853_RS04890;Dbxref=GenBank:WP_011191934.1;Name=WP_011191934.1;Ontology_term=GO:0042254,GO:0004540,GO:0046872;gbkey=CDS;gene=ybeY;go_function=RNA nuclease activity|0004540||IEA,metal ion binding|0046872||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210344.1;locus_tag=AD853_RS04890;product=rRNA maturation RNase YbeY;protein_id=WP_011191934.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 302987 304060 . - . ID=gene-AD853_RS04895;Name=AD853_RS04895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS04895;old_locus_tag=ERS008462_00986 NZ_CPUY01000003.1 Protein Homology CDS 302987 304060 . - 0 ID=cds-WP_190947798.1;Parent=gene-AD853_RS04895;Dbxref=GenBank:WP_190947798.1;Name=WP_190947798.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015683708.1;locus_tag=AD853_RS04895;product=PhoH family protein;protein_id=WP_190947798.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 304387 305811 . - . ID=gene-AD853_RS04900;Name=miaB;gbkey=Gene;gene=miaB;gene_biotype=protein_coding;locus_tag=AD853_RS04900;old_locus_tag=ERS008462_00987 NZ_CPUY01000003.1 Protein Homology CDS 304387 305811 . - 0 ID=cds-WP_011191936.1;Parent=gene-AD853_RS04900;Dbxref=GenBank:WP_011191936.1;Name=WP_011191936.1;Ontology_term=GO:0006400,GO:0016782,GO:0051539,GO:1904047;gbkey=CDS;gene=miaB;go_function=transferase activity%2C transferring sulphur-containing groups|0016782||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015683707.1;locus_tag=AD853_RS04900;product=tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB;protein_id=WP_011191936.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 306053 307234 . + . ID=gene-AD853_RS04905;Name=ubiF;gbkey=Gene;gene=ubiF;gene_biotype=protein_coding;locus_tag=AD853_RS04905;old_locus_tag=ERS008462_00988 NZ_CPUY01000003.1 Protein Homology CDS 306053 307234 . + 0 ID=cds-WP_038824256.1;Parent=gene-AD853_RS04905;Dbxref=GenBank:WP_038824256.1;Name=WP_038824256.1;Ontology_term=GO:0006744,GO:0016709;gbkey=CDS;gene=ubiF;go_function=oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C NAD(P)H as one donor%2C and incorporation of one atom of oxygen|0016709||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005279090.1;locus_tag=AD853_RS04905;product=3-demethoxyubiquinol 3-hydroxylase;protein_id=WP_038824256.1;transl_table=11 NZ_CPUY01000003.1 RefSeq gene 307647 307721 . - . ID=gene-AD853_RS04910;Name=AD853_RS04910;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD853_RS04910;old_locus_tag=ERS008462_00989 NZ_CPUY01000003.1 tRNAscan-SE tRNA 307647 307721 . - . ID=rna-AD853_RS04910;Parent=gene-AD853_RS04910;anticodon=(pos:complement(307687..307689));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD853_RS04910;product=tRNA-Gln NZ_CPUY01000003.1 tRNAscan-SE exon 307647 307721 . - . ID=exon-AD853_RS04910-1;Parent=rna-AD853_RS04910;anticodon=(pos:complement(307687..307689));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD853_RS04910;product=tRNA-Gln NZ_CPUY01000003.1 RefSeq gene 307727 307803 . - . ID=gene-AD853_RS04915;Name=AD853_RS04915;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD853_RS04915;old_locus_tag=ERS008462_00990 NZ_CPUY01000003.1 tRNAscan-SE tRNA 307727 307803 . - . ID=rna-AD853_RS04915;Parent=gene-AD853_RS04915;anticodon=(pos:complement(307767..307769));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD853_RS04915;product=tRNA-Met NZ_CPUY01000003.1 tRNAscan-SE exon 307727 307803 . - . ID=exon-AD853_RS04915-1;Parent=rna-AD853_RS04915;anticodon=(pos:complement(307767..307769));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD853_RS04915;product=tRNA-Met NZ_CPUY01000003.1 RefSeq gene 307836 307910 . - . ID=gene-AD853_RS04920;Name=AD853_RS04920;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD853_RS04920;old_locus_tag=ERS008462_00991 NZ_CPUY01000003.1 tRNAscan-SE tRNA 307836 307910 . - . ID=rna-AD853_RS04920;Parent=gene-AD853_RS04920;anticodon=(pos:complement(307876..307878));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD853_RS04920;product=tRNA-Gln NZ_CPUY01000003.1 tRNAscan-SE exon 307836 307910 . - . ID=exon-AD853_RS04920-1;Parent=rna-AD853_RS04920;anticodon=(pos:complement(307876..307878));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD853_RS04920;product=tRNA-Gln NZ_CPUY01000003.1 RefSeq gene 307994 308068 . - . ID=gene-AD853_RS04925;Name=AD853_RS04925;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD853_RS04925;old_locus_tag=ERS008462_00992 NZ_CPUY01000003.1 tRNAscan-SE tRNA 307994 308068 . - . ID=rna-AD853_RS04925;Parent=gene-AD853_RS04925;anticodon=(pos:complement(308034..308036));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD853_RS04925;product=tRNA-Gln NZ_CPUY01000003.1 tRNAscan-SE exon 307994 308068 . - . ID=exon-AD853_RS04925-1;Parent=rna-AD853_RS04925;anticodon=(pos:complement(308034..308036));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD853_RS04925;product=tRNA-Gln NZ_CPUY01000003.1 RefSeq gene 308098 308182 . - . ID=gene-AD853_RS04930;Name=AD853_RS04930;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD853_RS04930;old_locus_tag=ERS008462_00993 NZ_CPUY01000003.1 tRNAscan-SE tRNA 308098 308182 . - . ID=rna-AD853_RS04930;Parent=gene-AD853_RS04930;anticodon=(pos:complement(308146..308148));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD853_RS04930;product=tRNA-Leu NZ_CPUY01000003.1 tRNAscan-SE exon 308098 308182 . - . ID=exon-AD853_RS04930-1;Parent=rna-AD853_RS04930;anticodon=(pos:complement(308146..308148));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD853_RS04930;product=tRNA-Leu NZ_CPUY01000003.1 RefSeq gene 308190 308266 . - . ID=gene-AD853_RS04935;Name=AD853_RS04935;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD853_RS04935;old_locus_tag=ERS008462_00994 NZ_CPUY01000003.1 tRNAscan-SE tRNA 308190 308266 . - . ID=rna-AD853_RS04935;Parent=gene-AD853_RS04935;anticodon=(pos:complement(308230..308232));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD853_RS04935;product=tRNA-Met NZ_CPUY01000003.1 tRNAscan-SE exon 308190 308266 . - . ID=exon-AD853_RS04935-1;Parent=rna-AD853_RS04935;anticodon=(pos:complement(308230..308232));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD853_RS04935;product=tRNA-Met ##sequence-region NZ_CPUY01000004.1 1 254196 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=633 NZ_CPUY01000004.1 RefSeq region 1 254196 . + . ID=NZ_CPUY01000004.1:1..254196;Dbxref=taxon:633;collection-date=1900/2008;country=South Africa;gbkey=Src;genome=genomic;isolation-source=not known;mol_type=genomic DNA;nat-host=pig;serovar=O:3;strain=IP32544 NZ_CPUY01000004.1 RefSeq gene 205 420 . - . ID=gene-AD853_RS04940;Name=osmB;gbkey=Gene;gene=osmB;gene_biotype=protein_coding;locus_tag=AD853_RS04940;old_locus_tag=ERS008462_00995 NZ_CPUY01000004.1 Protein Homology CDS 205 420 . - 0 ID=cds-WP_002210611.1;Parent=gene-AD853_RS04940;Dbxref=GenBank:WP_002210611.1;Name=WP_002210611.1;gbkey=CDS;gene=osmB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210611.1;locus_tag=AD853_RS04940;product=osmotically-inducible lipoprotein OsmB;protein_id=WP_002210611.1;transl_table=11 NZ_CPUY01000004.1 RefSeq gene 900 1595 . + . ID=gene-AD853_RS04945;Name=araD;gbkey=Gene;gene=araD;gene_biotype=protein_coding;locus_tag=AD853_RS04945;old_locus_tag=ERS008462_00996 NZ_CPUY01000004.1 Protein Homology CDS 900 1595 . + 0 ID=cds-WP_002210610.1;Parent=gene-AD853_RS04945;Dbxref=GenBank:WP_002210610.1;Name=WP_002210610.1;Ontology_term=GO:0019568,GO:0008270,GO:0008742;gbkey=CDS;gene=araD;go_function=zinc ion binding|0008270||IEA,L-ribulose-phosphate 4-epimerase activity|0008742||IEA;go_process=arabinose catabolic process|0019568||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019083158.1;locus_tag=AD853_RS04945;product=L-ribulose-5-phosphate 4-epimerase;protein_id=WP_002210610.1;transl_table=11 NZ_CPUY01000004.1 RefSeq gene 1624 1872 . - . ID=gene-AD853_RS04950;Name=AD853_RS04950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS04950;old_locus_tag=ERS008462_00997 NZ_CPUY01000004.1 Protein Homology CDS 1624 1872 . - 0 ID=cds-WP_002210609.1;Parent=gene-AD853_RS04950;Dbxref=GenBank:WP_002210609.1;Name=WP_002210609.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004699244.1;locus_tag=AD853_RS04950;product=DUF2164 domain-containing protein;protein_id=WP_002210609.1;transl_table=11 NZ_CPUY01000004.1 RefSeq gene 2206 2871 . + . ID=gene-AD853_RS04955;Name=fsa;gbkey=Gene;gene=fsa;gene_biotype=protein_coding;locus_tag=AD853_RS04955;old_locus_tag=ERS008462_00998 NZ_CPUY01000004.1 Protein Homology CDS 2206 2871 . + 0 ID=cds-WP_002215192.1;Parent=gene-AD853_RS04955;Dbxref=GenBank:WP_002215192.1;Name=WP_002215192.1;Ontology_term=GO:0005975,GO:0016832;gbkey=CDS;gene=fsa;go_function=aldehyde-lyase activity|0016832||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002215192.1;locus_tag=AD853_RS04955;product=fructose-6-phosphate aldolase;protein_id=WP_002215192.1;transl_table=11 NZ_CPUY01000004.1 RefSeq gene 2988 3293 . - . ID=gene-AD853_RS04960;Name=AD853_RS04960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS04960;old_locus_tag=ERS008462_00999 NZ_CPUY01000004.1 Protein Homology CDS 2988 3293 . - 0 ID=cds-WP_002210607.1;Parent=gene-AD853_RS04960;Dbxref=GenBank:WP_002210607.1;Name=WP_002210607.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210607.1;locus_tag=AD853_RS04960;product=YbdD/YjiX family protein;protein_id=WP_002210607.1;transl_table=11 NZ_CPUY01000004.1 RefSeq gene 3286 5352 . - . ID=gene-AD853_RS04965;Name=AD853_RS04965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS04965;old_locus_tag=ERS008462_01000 NZ_CPUY01000004.1 Protein Homology CDS 3286 5352 . - 0 ID=cds-WP_002220371.1;Parent=gene-AD853_RS04965;Dbxref=GenBank:WP_002220371.1;Name=WP_002220371.1;Ontology_term=GO:0009267,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=cellular response to starvation|0009267||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192451.1;locus_tag=AD853_RS04965;product=carbon starvation CstA family protein;protein_id=WP_002220371.1;transl_table=11 NZ_CPUY01000004.1 RefSeq gene 5702 7636 . - . ID=gene-AD853_RS04970;Name=AD853_RS04970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS04970;old_locus_tag=ERS008462_01001 NZ_CPUY01000004.1 Protein Homology CDS 5702 7636 . - 0 ID=cds-WP_038823946.1;Parent=gene-AD853_RS04970;Dbxref=GenBank:WP_038823946.1;Name=WP_038823946.1;Ontology_term=GO:0006401,GO:0003723,GO:0008859;gbkey=CDS;go_function=RNA binding|0003723||IEA,exoribonuclease II activity|0008859||IEA;go_process=RNA catabolic process|0006401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015840571.1;locus_tag=AD853_RS04970;product=exoribonuclease II;protein_id=WP_038823946.1;transl_table=11 NZ_CPUY01000004.1 RefSeq pseudogene 8285 9596 . + . ID=gene-AD853_RS04975;Name=AD853_RS04975;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD853_RS04975;pseudo=true NZ_CPUY01000004.1 Protein Homology CDS 8285 9596 . + 0 ID=cds-AD853_RS04975;Parent=gene-AD853_RS04975;Note=frameshifted;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192453.1;locus_tag=AD853_RS04975;product=MFS transporter;pseudo=true;transl_table=11 NZ_CPUY01000004.1 RefSeq gene 9634 10632 . + . ID=gene-AD853_RS04980;Name=denD;gbkey=Gene;gene=denD;gene_biotype=protein_coding;locus_tag=AD853_RS04980;old_locus_tag=ERS008462_01004 NZ_CPUY01000004.1 Protein Homology CDS 9634 10632 . + 0 ID=cds-WP_032466416.1;Parent=gene-AD853_RS04980;Dbxref=GenBank:WP_032466416.1;Name=WP_032466416.1;Ontology_term=GO:0005975,GO:0016491;gbkey=CDS;gene=denD;go_function=oxidoreductase activity|0016491||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304078.1;locus_tag=AD853_RS04980;product=D-erythronate dehydrogenase;protein_id=WP_032466416.1;transl_table=11 NZ_CPUY01000004.1 RefSeq gene 10798 11439 . - . ID=gene-AD853_RS04985;Name=nth;gbkey=Gene;gene=nth;gene_biotype=protein_coding;locus_tag=AD853_RS04985;old_locus_tag=ERS008462_01005 NZ_CPUY01000004.1 Protein Homology CDS 10798 11439 . - 0 ID=cds-WP_002210602.1;Parent=gene-AD853_RS04985;Dbxref=GenBank:WP_002210602.1;Name=WP_002210602.1;Ontology_term=GO:0006284,GO:0003906;gbkey=CDS;gene=nth;go_function=DNA-(apurinic or apyrimidinic site) endonuclease activity|0003906||IEA;go_process=base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004712105.1;locus_tag=AD853_RS04985;product=endonuclease III;protein_id=WP_002210602.1;transl_table=11 NZ_CPUY01000004.1 RefSeq gene 11436 12137 . - . ID=gene-AD853_RS04990;Name=AD853_RS04990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS04990;old_locus_tag=ERS008462_01006 NZ_CPUY01000004.1 Protein Homology CDS 11436 12137 . - 0 ID=cds-WP_012304077.1;Parent=gene-AD853_RS04990;Dbxref=GenBank:WP_012304077.1;Name=WP_012304077.1;Ontology_term=GO:0022900;gbkey=CDS;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019079469.1;locus_tag=AD853_RS04990;product=electron transport complex subunit E;protein_id=WP_012304077.1;transl_table=11 NZ_CPUY01000004.1 RefSeq gene 12134 12763 . - . ID=gene-AD853_RS04995;Name=rsxG;gbkey=Gene;gene=rsxG;gene_biotype=protein_coding;locus_tag=AD853_RS04995;old_locus_tag=ERS008462_01007 NZ_CPUY01000004.1 Protein Homology CDS 12134 12763 . - 0 ID=cds-WP_002210600.1;Parent=gene-AD853_RS04995;Dbxref=GenBank:WP_002210600.1;Name=WP_002210600.1;Ontology_term=GO:0022900,GO:0009055,GO:0010181,GO:0016020;gbkey=CDS;gene=rsxG;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,FMN binding|0010181||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105098.1;locus_tag=AD853_RS04995;product=electron transport complex subunit RsxG;protein_id=WP_002210600.1;transl_table=11 NZ_CPUY01000004.1 RefSeq gene 12773 13867 . - . ID=gene-AD853_RS05000;Name=rsxD;gbkey=Gene;gene=rsxD;gene_biotype=protein_coding;locus_tag=AD853_RS05000;old_locus_tag=ERS008462_01008 NZ_CPUY01000004.1 Protein Homology CDS 12773 13867 . - 0 ID=cds-WP_012413725.1;Parent=gene-AD853_RS05000;Dbxref=GenBank:WP_012413725.1;Name=WP_012413725.1;Ontology_term=GO:0022900,GO:0055085,GO:0016020;gbkey=CDS;gene=rsxD;go_component=membrane|0016020||IEA;go_process=electron transport chain|0022900||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210599.1;locus_tag=AD853_RS05000;product=electron transport complex subunit RsxD;protein_id=WP_012413725.1;transl_table=11 NZ_CPUY01000004.1 RefSeq gene 14356 15249 . + . ID=gene-AD853_RS05005;Name=AD853_RS05005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS05005;old_locus_tag=ERS008462_01009 NZ_CPUY01000004.1 Protein Homology CDS 14356 15249 . + 0 ID=cds-WP_002210598.1;Parent=gene-AD853_RS05005;Dbxref=GenBank:WP_002210598.1;Name=WP_002210598.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210598.1;locus_tag=AD853_RS05005;product=helix-turn-helix domain-containing protein;protein_id=WP_002210598.1;transl_table=11 NZ_CPUY01000004.1 RefSeq gene 15354 17099 . - . ID=gene-AD853_RS05010;Name=rsxC;gbkey=Gene;gene=rsxC;gene_biotype=protein_coding;locus_tag=AD853_RS05010;old_locus_tag=ERS008462_01010 NZ_CPUY01000004.1 Protein Homology CDS 15354 17099 . - 0 ID=cds-WP_038825657.1;Parent=gene-AD853_RS05010;Dbxref=GenBank:WP_038825657.1;Name=WP_038825657.1;Ontology_term=GO:0009055,GO:0051539,GO:0016020;gbkey=CDS;gene=rsxC;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002354250.1;locus_tag=AD853_RS05010;product=electron transport complex subunit RsxC;protein_id=WP_038825657.1;transl_table=11 NZ_CPUY01000004.1 RefSeq gene 17092 17715 . - . ID=gene-AD853_RS05015;Name=rsxB;gbkey=Gene;gene=rsxB;gene_biotype=protein_coding;locus_tag=AD853_RS05015;old_locus_tag=ERS008462_01011 NZ_CPUY01000004.1 Protein Homology CDS 17092 17715 . - 0 ID=cds-WP_038824728.1;Parent=gene-AD853_RS05015;Dbxref=GenBank:WP_038824728.1;Name=WP_038824728.1;Ontology_term=GO:0022900,GO:0009055,GO:0051536;gbkey=CDS;gene=rsxB;go_function=electron transfer activity|0009055||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004711774.1;locus_tag=AD853_RS05015;product=electron transport complex subunit RsxB;protein_id=WP_038824728.1;transl_table=11 NZ_CPUY01000004.1 RefSeq gene 17715 18296 . - . ID=gene-AD853_RS05020;Name=rsxA;gbkey=Gene;gene=rsxA;gene_biotype=protein_coding;locus_tag=AD853_RS05020;old_locus_tag=ERS008462_01012 NZ_CPUY01000004.1 Protein Homology CDS 17715 18296 . - 0 ID=cds-WP_002210595.1;Parent=gene-AD853_RS05020;Dbxref=GenBank:WP_002210595.1;Name=WP_002210595.1;Ontology_term=GO:0022900,GO:0016020;gbkey=CDS;gene=rsxA;go_component=membrane|0016020||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010845872.1;locus_tag=AD853_RS05020;product=electron transport complex subunit RsxA;protein_id=WP_002210595.1;transl_table=11 NZ_CPUY01000004.1 RefSeq gene 18424 18867 . - . ID=gene-AD853_RS05025;Name=AD853_RS05025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS05025;old_locus_tag=ERS008462_01013 NZ_CPUY01000004.1 Protein Homology CDS 18424 18867 . - 0 ID=cds-WP_002210594.1;Parent=gene-AD853_RS05025;Dbxref=GenBank:WP_002210594.1;Name=WP_002210594.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210594.1;locus_tag=AD853_RS05025;product=DUF2569 domain-containing protein;protein_id=WP_002210594.1;transl_table=11 NZ_CPUY01000004.1 RefSeq gene 19342 21489 . + . ID=gene-AD853_RS05030;Name=AD853_RS05030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS05030;old_locus_tag=ERS008462_01014 NZ_CPUY01000004.1 Protein Homology CDS 19342 21489 . + 0 ID=cds-WP_038824727.1;Parent=gene-AD853_RS05030;Dbxref=GenBank:WP_038824727.1;Name=WP_038824727.1;Ontology_term=GO:0005524,GO:0008233,GO:0016887,GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,peptidase activity|0008233||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105094.1;locus_tag=AD853_RS05030;product=peptidase domain-containing ABC transporter;protein_id=WP_038824727.1;transl_table=11 NZ_CPUY01000004.1 RefSeq gene 21534 22535 . + . ID=gene-AD853_RS05035;Name=AD853_RS05035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS05035;old_locus_tag=ERS008462_01015 NZ_CPUY01000004.1 Protein Homology CDS 21534 22535 . + 0 ID=cds-WP_002215881.1;Parent=gene-AD853_RS05035;Dbxref=GenBank:WP_002215881.1;Name=WP_002215881.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015683610.1;locus_tag=AD853_RS05035;product=putative HlyD family type I secretion protein;protein_id=WP_002215881.1;transl_table=11 NZ_CPUY01000004.1 RefSeq gene 22535 22903 . + . ID=gene-AD853_RS05040;Name=AD853_RS05040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS05040;old_locus_tag=ERS008462_01016 NZ_CPUY01000004.1 Protein Homology CDS 22535 22903 . + 0 ID=cds-WP_002215882.1;Parent=gene-AD853_RS05040;Dbxref=GenBank:WP_002215882.1;Name=WP_002215882.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002215882.1;locus_tag=AD853_RS05040;product=putative HlyD family type I secretion protein;protein_id=WP_002215882.1;transl_table=11 NZ_CPUY01000004.1 RefSeq gene 22905 25043 . + . ID=gene-AD853_RS05045;Name=AD853_RS05045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS05045;old_locus_tag=ERS008462_01017 NZ_CPUY01000004.1 Protein Homology CDS 22905 25043 . + 0 ID=cds-WP_032466421.1;Parent=gene-AD853_RS05045;Dbxref=GenBank:WP_032466421.1;Name=WP_032466421.1;Ontology_term=GO:0030253,GO:0005524,GO:0016020,GO:0030256;gbkey=CDS;go_component=membrane|0016020||IEA,type I protein secretion system complex|0030256||IEA;go_function=ATP binding|0005524||IEA;go_process=protein secretion by the type I secretion system|0030253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210593.1;locus_tag=AD853_RS05045;product=type I secretion system permease/ATPase;protein_id=WP_032466421.1;transl_table=11 NZ_CPUY01000004.1 RefSeq gene 25255 26757 . - . ID=gene-AD853_RS05050;Name=araA;gbkey=Gene;gene=araA;gene_biotype=protein_coding;locus_tag=AD853_RS05050;old_locus_tag=ERS008462_01019 NZ_CPUY01000004.1 Protein Homology CDS 25255 26757 . - 0 ID=cds-WP_011192463.1;Parent=gene-AD853_RS05050;Dbxref=GenBank:WP_011192463.1;Name=WP_011192463.1;Ontology_term=GO:0005996,GO:0008733;gbkey=CDS;gene=araA;go_function=L-arabinose isomerase activity|0008733||IEA;go_process=monosaccharide metabolic process|0005996||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105092.1;locus_tag=AD853_RS05050;product=L-arabinose isomerase;protein_id=WP_011192463.1;transl_table=11 NZ_CPUY01000004.1 RefSeq gene 26841 28544 . - . ID=gene-AD853_RS05055;Name=AD853_RS05055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS05055;old_locus_tag=ERS008462_01020 NZ_CPUY01000004.1 Protein Homology CDS 26841 28544 . - 0 ID=cds-WP_011192464.1;Parent=gene-AD853_RS05055;Dbxref=GenBank:WP_011192464.1;Name=WP_011192464.1;Ontology_term=GO:0019569,GO:0005524,GO:0008741;gbkey=CDS;go_function=ATP binding|0005524||IEA,ribulokinase activity|0008741||IEA;go_process=L-arabinose catabolic process to D-xylulose 5-phosphate|0019569||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210590.1;locus_tag=AD853_RS05055;product=ribulokinase;protein_id=WP_011192464.1;transl_table=11 NZ_CPUY01000004.1 RefSeq gene 28951 29934 . + . ID=gene-AD853_RS05060;Name=AD853_RS05060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS05060;old_locus_tag=ERS008462_01021 NZ_CPUY01000004.1 Protein Homology CDS 28951 29934 . + 0 ID=cds-WP_002210589.1;Parent=gene-AD853_RS05060;Dbxref=GenBank:WP_002210589.1;Name=WP_002210589.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192465.1;locus_tag=AD853_RS05060;product=arabinose ABC transporter substrate-binding protein;protein_id=WP_002210589.1;transl_table=11 NZ_CPUY01000004.1 RefSeq gene 30032 31603 . + . ID=gene-AD853_RS05065;Name=araG;gbkey=Gene;gene=araG;gene_biotype=protein_coding;locus_tag=AD853_RS05065;old_locus_tag=ERS008462_01022 NZ_CPUY01000004.1 Protein Homology CDS 30032 31603 . + 0 ID=cds-WP_038825279.1;Parent=gene-AD853_RS05065;Dbxref=GenBank:WP_038825279.1;Name=WP_038825279.1;Ontology_term=GO:0042882,GO:0005524,GO:0015612,GO:0016020;gbkey=CDS;gene=araG;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type L-arabinose transporter activity|0015612||IEA;go_process=L-arabinose transmembrane transport|0042882||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210588.1;locus_tag=AD853_RS05065;product=L-arabinose ABC transporter ATP-binding protein AraG;protein_id=WP_038825279.1;transl_table=11 NZ_CPUY01000004.1 RefSeq gene 31621 32670 . + . ID=gene-AD853_RS05070;Name=araH;gbkey=Gene;gene=araH;gene_biotype=protein_coding;locus_tag=AD853_RS05070;old_locus_tag=ERS008462_01023 NZ_CPUY01000004.1 Protein Homology CDS 31621 32670 . + 0 ID=cds-WP_011192466.1;Parent=gene-AD853_RS05070;Dbxref=GenBank:WP_011192466.1;Name=WP_011192466.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=araH;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210587.1;locus_tag=AD853_RS05070;product=L-arabinose ABC transporter permease AraH;protein_id=WP_011192466.1;transl_table=11 NZ_CPUY01000004.1 RefSeq gene 32891 33823 . + . ID=gene-AD853_RS05075;Name=araC;gbkey=Gene;gene=araC;gene_biotype=protein_coding;locus_tag=AD853_RS05075;old_locus_tag=ERS008462_01024 NZ_CPUY01000004.1 Protein Homology CDS 32891 33823 . + 0 ID=cds-WP_011192467.1;Parent=gene-AD853_RS05075;Dbxref=GenBank:WP_011192467.1;Name=WP_011192467.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;gene=araC;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192467.1;locus_tag=AD853_RS05075;product=arabinose operon transcriptional regulator AraC;protein_id=WP_011192467.1;transl_table=11 NZ_CPUY01000004.1 RefSeq gene 33951 35000 . + . ID=gene-AD853_RS05080;Name=AD853_RS05080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS05080;old_locus_tag=ERS008462_01025 NZ_CPUY01000004.1 Protein Homology CDS 33951 35000 . + 0 ID=cds-WP_002210585.1;Parent=gene-AD853_RS05080;Dbxref=GenBank:WP_002210585.1;Name=WP_002210585.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210585.1;locus_tag=AD853_RS05080;product=oxidoreductase;protein_id=WP_002210585.1;transl_table=11 NZ_CPUY01000004.1 RefSeq gene 35194 36222 . + . ID=gene-AD853_RS05085;Name=AD853_RS05085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS05085;old_locus_tag=ERS008462_01026 NZ_CPUY01000004.1 Protein Homology CDS 35194 36222 . + 0 ID=cds-WP_011192468.1;Parent=gene-AD853_RS05085;Dbxref=GenBank:WP_011192468.1;Name=WP_011192468.1;Ontology_term=GO:0006810,GO:0015293,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210584.1;locus_tag=AD853_RS05085;product=bile acid:sodium symporter family protein;protein_id=WP_011192468.1;transl_table=11 NZ_CPUY01000004.1 RefSeq gene 36397 37401 . - . ID=gene-AD853_RS05090;Name=add;gbkey=Gene;gene=add;gene_biotype=protein_coding;locus_tag=AD853_RS05090;old_locus_tag=ERS008462_01027 NZ_CPUY01000004.1 Protein Homology CDS 36397 37401 . - 0 ID=cds-WP_011192469.1;Parent=gene-AD853_RS05090;Dbxref=GenBank:WP_011192469.1;Name=WP_011192469.1;Ontology_term=GO:0009168,GO:0004000;gbkey=CDS;gene=add;go_function=adenosine deaminase activity|0004000||IEA;go_process=purine ribonucleoside monophosphate biosynthetic process|0009168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105088.1;locus_tag=AD853_RS05090;product=adenosine deaminase;protein_id=WP_011192469.1;transl_table=11 NZ_CPUY01000004.1 RefSeq gene 37790 38221 . + . ID=gene-AD853_RS22020;Name=AD853_RS22020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS22020;old_locus_tag=ERS008462_01028 NZ_CPUY01000004.1 GeneMarkS-2+ CDS 37790 38221 . + 0 ID=cds-WP_223847754.1;Parent=gene-AD853_RS22020;Dbxref=GenBank:WP_223847754.1;Name=WP_223847754.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AD853_RS22020;product=hypothetical protein;protein_id=WP_223847754.1;transl_table=11 NZ_CPUY01000004.1 RefSeq gene 38494 39051 . + . ID=gene-AD853_RS22025;Name=AD853_RS22025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS22025;old_locus_tag=ERS008462_01029 NZ_CPUY01000004.1 GeneMarkS-2+ CDS 38494 39051 . + 0 ID=cds-WP_223847755.1;Parent=gene-AD853_RS22025;Dbxref=GenBank:WP_223847755.1;Name=WP_223847755.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AD853_RS22025;product=hypothetical protein;protein_id=WP_223847755.1;transl_table=11 NZ_CPUY01000004.1 RefSeq gene 39224 40153 . - . ID=gene-AD853_RS05100;Name=AD853_RS05100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS05100;old_locus_tag=ERS008462_01030 NZ_CPUY01000004.1 Protein Homology CDS 39224 40153 . - 0 ID=cds-WP_038825277.1;Parent=gene-AD853_RS05100;Dbxref=GenBank:WP_038825277.1;Name=WP_038825277.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192471.1;locus_tag=AD853_RS05100;product=DUF7916 family protein;protein_id=WP_038825277.1;transl_table=11 NZ_CPUY01000004.1 RefSeq gene 40508 42052 . - . ID=gene-AD853_RS05105;Name=AD853_RS05105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS05105;old_locus_tag=ERS008462_01031 NZ_CPUY01000004.1 Protein Homology CDS 40508 42052 . - 0 ID=cds-WP_038825276.1;Parent=gene-AD853_RS05105;Dbxref=GenBank:WP_038825276.1;Name=WP_038825276.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192473.1;locus_tag=AD853_RS05105;product=YdgA family protein;protein_id=WP_038825276.1;transl_table=11 NZ_CPUY01000004.1 RefSeq gene 42292 43467 . - . ID=gene-AD853_RS05110;Name=manA;gbkey=Gene;gene=manA;gene_biotype=protein_coding;locus_tag=AD853_RS05110;old_locus_tag=ERS008462_01032 NZ_CPUY01000004.1 Protein Homology CDS 42292 43467 . - 0 ID=cds-WP_038399826.1;Parent=gene-AD853_RS05110;Dbxref=GenBank:WP_038399826.1;Name=WP_038399826.1;Ontology_term=GO:0009298,GO:0004476,GO:0008270;gbkey=CDS;gene=manA;go_function=mannose-6-phosphate isomerase activity|0004476||IEA,zinc ion binding|0008270||IEA;go_process=GDP-mannose biosynthetic process|0009298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210579.1;locus_tag=AD853_RS05110;product=mannose-6-phosphate isomerase;protein_id=WP_038399826.1;transl_table=11 NZ_CPUY01000004.1 RefSeq gene 43751 45148 . + . ID=gene-AD853_RS05115;Name=fumC;gbkey=Gene;gene=fumC;gene_biotype=protein_coding;locus_tag=AD853_RS05115;old_locus_tag=ERS008462_01033 NZ_CPUY01000004.1 Protein Homology CDS 43751 45148 . + 0 ID=cds-WP_012304067.1;Parent=gene-AD853_RS05115;Dbxref=GenBank:WP_012304067.1;Name=WP_012304067.1;Ontology_term=GO:0006106,GO:0004333,GO:0045239;gbkey=CDS;gene=fumC;go_component=tricarboxylic acid cycle heteromeric enzyme complex|0045239||IEA;go_function=fumarate hydratase activity|0004333||IEA;go_process=fumarate metabolic process|0006106||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210578.1;locus_tag=AD853_RS05115;product=class II fumarate hydratase;protein_id=WP_012304067.1;transl_table=11 NZ_CPUY01000004.1 RefSeq gene 45228 46163 . - . ID=gene-AD853_RS05120;Name=tus;gbkey=Gene;gene=tus;gene_biotype=protein_coding;locus_tag=AD853_RS05120;old_locus_tag=ERS008462_01034 NZ_CPUY01000004.1 Protein Homology CDS 45228 46163 . - 0 ID=cds-WP_012105083.1;Parent=gene-AD853_RS05120;Dbxref=GenBank:WP_012105083.1;Name=WP_012105083.1;Ontology_term=GO:0006274,GO:0003677,GO:0005737;gbkey=CDS;gene=tus;go_component=cytoplasm|0005737||IEA;go_function=DNA binding|0003677||IEA;go_process=DNA replication termination|0006274||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105083.1;locus_tag=AD853_RS05120;product=DNA replication terminus site-binding protein;protein_id=WP_012105083.1;transl_table=11 NZ_CPUY01000004.1 RefSeq pseudogene 46368 47054 . - . ID=gene-AD853_RS05125;Name=AD853_RS05125;end_range=47054,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD853_RS05125;old_locus_tag=ERS008462_01035;partial=true;pseudo=true NZ_CPUY01000004.1 Protein Homology CDS 46368 47054 . - 0 ID=cds-AD853_RS05125;Parent=gene-AD853_RS05125;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0055085,GO:0022857;end_range=47054,.;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019079438.1;locus_tag=AD853_RS05125;partial=true;product=MFS transporter;pseudo=true;transl_table=11 NZ_CPUY01000004.1 RefSeq pseudogene 47044 47161 . + . ID=gene-AD853_RS22030;Name=AD853_RS22030;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD853_RS22030;partial=true;pseudo=true;start_range=.,47044 NZ_CPUY01000004.1 Protein Homology CDS 47044 47161 . + 0 ID=cds-AD853_RS22030;Parent=gene-AD853_RS22030;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004390320.1;locus_tag=AD853_RS22030;partial=true;product=LysR family transcriptional regulator;pseudo=true;start_range=.,47044;transl_table=11 NZ_CPUY01000004.1 RefSeq gene 47340 48557 . + . ID=gene-AD853_RS05130;Name=mlc;gbkey=Gene;gene=mlc;gene_biotype=protein_coding;gene_synonym=dgsA;locus_tag=AD853_RS05130;old_locus_tag=ERS008462_01036 NZ_CPUY01000004.1 Protein Homology CDS 47340 48557 . + 0 ID=cds-WP_038825275.1;Parent=gene-AD853_RS05130;Dbxref=GenBank:WP_038825275.1;Name=WP_038825275.1;Ontology_term=GO:0006355,GO:0003677,GO:0046872;gbkey=CDS;gene=mlc;go_function=DNA binding|0003677||IEA,metal ion binding|0046872||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192479.1;locus_tag=AD853_RS05130;product=sugar metabolism global transcriptional regulator Mlc;protein_id=WP_038825275.1;transl_table=11 NZ_CPUY01000004.1 RefSeq gene 48781 49449 . + . ID=gene-AD853_RS05135;Name=bioD;gbkey=Gene;gene=bioD;gene_biotype=protein_coding;locus_tag=AD853_RS05135;old_locus_tag=ERS008462_01038 NZ_CPUY01000004.1 Protein Homology CDS 48781 49449 . + 0 ID=cds-WP_002210575.1;Parent=gene-AD853_RS05135;Dbxref=GenBank:WP_002210575.1;Name=WP_002210575.1;Ontology_term=GO:0009102,GO:0000287,GO:0004141,GO:0005524;gbkey=CDS;gene=bioD;go_function=magnesium ion binding|0000287||IEA,dethiobiotin synthase activity|0004141||IEA,ATP binding|0005524||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210575.1;locus_tag=AD853_RS05135;product=dethiobiotin synthase;protein_id=WP_002210575.1;transl_table=11 NZ_CPUY01000004.1 RefSeq gene 49535 50815 . - . ID=gene-AD853_RS05140;Name=clcB;gbkey=Gene;gene=clcB;gene_biotype=protein_coding;locus_tag=AD853_RS05140;old_locus_tag=ERS008462_01039 NZ_CPUY01000004.1 Protein Homology CDS 49535 50815 . - 0 ID=cds-WP_012413730.1;Parent=gene-AD853_RS05140;Dbxref=GenBank:WP_012413730.1;Name=WP_012413730.1;Ontology_term=GO:0006821,GO:0010447,GO:0005247,GO:0016020;gbkey=CDS;gene=clcB;go_component=membrane|0016020||IEA;go_function=voltage-gated chloride channel activity|0005247||IEA;go_process=chloride transport|0006821||IEA,response to acidic pH|0010447||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304065.1;locus_tag=AD853_RS05140;product=voltage-gated ClC-type chloride channel ClcB;protein_id=WP_012413730.1;transl_table=11 NZ_CPUY01000004.1 RefSeq gene 50961 51206 . - . ID=gene-AD853_RS05145;Name=AD853_RS05145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS05145;old_locus_tag=ERS008462_01040 NZ_CPUY01000004.1 Protein Homology CDS 50961 51206 . - 0 ID=cds-WP_011192481.1;Parent=gene-AD853_RS05145;Dbxref=GenBank:WP_011192481.1;Name=WP_011192481.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019079433.1;locus_tag=AD853_RS05145;product=DUF1161 domain-containing protein;protein_id=WP_011192481.1;transl_table=11 NZ_CPUY01000004.1 RefSeq gene 51420 51791 . - . ID=gene-AD853_RS05150;Name=AD853_RS05150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS05150;old_locus_tag=ERS008462_01041 NZ_CPUY01000004.1 Protein Homology CDS 51420 51791 . - 0 ID=cds-WP_038399823.1;Parent=gene-AD853_RS05150;Dbxref=GenBank:WP_038399823.1;Name=WP_038399823.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004874372.1;locus_tag=AD853_RS05150;product=DUF1283 family protein;protein_id=WP_038399823.1;transl_table=11 NZ_CPUY01000004.1 RefSeq gene 52021 52770 . - . ID=gene-AD853_RS05155;Name=ydfG;gbkey=Gene;gene=ydfG;gene_biotype=protein_coding;locus_tag=AD853_RS05155;old_locus_tag=ERS008462_01042 NZ_CPUY01000004.1 Protein Homology CDS 52021 52770 . - 0 ID=cds-WP_011192483.1;Parent=gene-AD853_RS05155;Dbxref=GenBank:WP_011192483.1;Name=WP_011192483.1;Ontology_term=GO:0016491;gbkey=CDS;gene=ydfG;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004944029.1;locus_tag=AD853_RS05155;product=bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG;protein_id=WP_011192483.1;transl_table=11 NZ_CPUY01000004.1 RefSeq pseudogene 52888 52965 . - . ID=gene-AD853_RS22590;Name=AD853_RS22590;end_range=52965,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD853_RS22590;partial=true;pseudo=true NZ_CPUY01000004.1 Protein Homology CDS 52888 52965 . - 0 ID=cds-AD853_RS22590;Parent=gene-AD853_RS22590;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006310,GO:0000150,GO:0003677;end_range=52965,.;gbkey=CDS;go_function=DNA strand exchange activity|0000150||IEA,DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012413732.1;locus_tag=AD853_RS22590;partial=true;product=helix-turn-helix domain-containing protein;pseudo=true;transl_table=11 NZ_CPUY01000004.1 RefSeq pseudogene 52937 54422 . + . ID=gene-AD853_RS05160;Name=AD853_RS05160;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD853_RS05160;old_locus_tag=ERS008462_01044;pseudo=true NZ_CPUY01000004.1 Protein Homology CDS 52937 54422 . + 0 ID=cds-AD853_RS05160;Parent=gene-AD853_RS05160;Note=frameshifted;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019455326.1;locus_tag=AD853_RS05160;product=aldehyde dehydrogenase family protein;pseudo=true;transl_table=11 NZ_CPUY01000004.1 RefSeq gene 54703 55419 . - . ID=gene-AD853_RS22035;Name=AD853_RS22035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS22035;old_locus_tag=ERS008462_01045 NZ_CPUY01000004.1 GeneMarkS-2+ CDS 54703 55419 . - 0 ID=cds-WP_223847756.1;Parent=gene-AD853_RS22035;Dbxref=GenBank:WP_223847756.1;Name=WP_223847756.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AD853_RS22035;product=hypothetical protein;protein_id=WP_223847756.1;transl_table=11 NZ_CPUY01000004.1 RefSeq gene 55343 56131 . - . ID=gene-AD853_RS22040;Name=AD853_RS22040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS22040;old_locus_tag=ERS008462_01046 NZ_CPUY01000004.1 GeneMarkS-2+ CDS 55343 56131 . - 0 ID=cds-WP_223847757.1;Parent=gene-AD853_RS22040;Dbxref=GenBank:WP_223847757.1;Name=WP_223847757.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AD853_RS22040;product=hypothetical protein;protein_id=WP_223847757.1;transl_table=11 NZ_CPUY01000004.1 RefSeq gene 56822 57745 . + . ID=gene-AD853_RS05170;Name=AD853_RS05170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS05170;old_locus_tag=ERS008462_01047 NZ_CPUY01000004.1 Protein Homology CDS 56822 57745 . + 0 ID=cds-WP_012105076.1;Parent=gene-AD853_RS05170;Dbxref=GenBank:WP_012105076.1;Name=WP_012105076.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192487.1;locus_tag=AD853_RS05170;product=DMT family transporter;protein_id=WP_012105076.1;transl_table=11 NZ_CPUY01000004.1 RefSeq pseudogene 57794 57949 . + . ID=gene-AD853_RS20310;Name=AD853_RS20310;end_range=57949,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD853_RS20310;partial=true;pseudo=true;start_range=.,57794 NZ_CPUY01000004.1 Protein Homology CDS 57794 57949 . + 0 ID=cds-AD853_RS20310;Parent=gene-AD853_RS20310;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=57949,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612097.1;locus_tag=AD853_RS20310;partial=true;product=IS3 family transposase;pseudo=true;start_range=.,57794;transl_table=11 NZ_CPUY01000004.1 RefSeq gene 58079 58534 . - . ID=gene-AD853_RS05175;Name=AD853_RS05175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS05175;old_locus_tag=ERS008462_01048 NZ_CPUY01000004.1 Protein Homology CDS 58079 58534 . - 0 ID=cds-WP_157185917.1;Parent=gene-AD853_RS05175;Dbxref=GenBank:WP_157185917.1;Name=WP_157185917.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020708.6;locus_tag=AD853_RS05175;product=superantigen YpM;protein_id=WP_157185917.1;transl_table=11 NZ_CPUY01000004.1 RefSeq gene 59303 59653 . - . ID=gene-AD853_RS05185;Name=AD853_RS05185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS05185;old_locus_tag=ERS008462_01049 NZ_CPUY01000004.1 Protein Homology CDS 59303 59653 . - 0 ID=cds-WP_002211036.1;Parent=gene-AD853_RS05185;Dbxref=GenBank:WP_002211036.1;Name=WP_002211036.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002232804.1;locus_tag=AD853_RS05185;product=substrate-binding domain-containing protein;protein_id=WP_002211036.1;transl_table=11 NZ_CPUY01000004.1 RefSeq pseudogene 59683 60156 . - . ID=gene-AD853_RS05190;Name=AD853_RS05190;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD853_RS05190;old_locus_tag=ERS008462_01050;partial=true;pseudo=true;start_range=.,59683 NZ_CPUY01000004.1 Protein Homology CDS 59683 60156 . - 0 ID=cds-AD853_RS05190;Parent=gene-AD853_RS05190;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192492.1;locus_tag=AD853_RS05190;partial=true;product=ATP-binding cassette domain-containing protein;pseudo=true;start_range=.,59683;transl_table=11 NZ_CPUY01000004.1 RefSeq gene 60153 60806 . - . ID=gene-AD853_RS05195;Name=AD853_RS05195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS05195;old_locus_tag=ERS008462_01051 NZ_CPUY01000004.1 Protein Homology CDS 60153 60806 . - 0 ID=cds-WP_038824928.1;Parent=gene-AD853_RS05195;Dbxref=GenBank:WP_038824928.1;Name=WP_038824928.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304056.1;locus_tag=AD853_RS05195;product=DUF2291 domain-containing protein;protein_id=WP_038824928.1;transl_table=11 NZ_CPUY01000004.1 RefSeq gene 61561 62592 . + . ID=gene-AD853_RS05200;Name=AD853_RS05200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS05200;old_locus_tag=ERS008462_01052 NZ_CPUY01000004.1 Protein Homology CDS 61561 62592 . + 0 ID=cds-WP_038824927.1;Parent=gene-AD853_RS05200;Dbxref=GenBank:WP_038824927.1;Name=WP_038824927.1;Ontology_term=GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192494.1;locus_tag=AD853_RS05200;product=ABC transporter substrate-binding protein;protein_id=WP_038824927.1;transl_table=11 NZ_CPUY01000004.1 RefSeq gene 62596 63417 . + . ID=gene-AD853_RS05205;Name=AD853_RS05205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS05205;old_locus_tag=ERS008462_01053 NZ_CPUY01000004.1 Protein Homology CDS 62596 63417 . + 0 ID=cds-WP_002211034.1;Parent=gene-AD853_RS05205;Dbxref=GenBank:WP_002211034.1;Name=WP_002211034.1;Ontology_term=GO:0005524,GO:0022857;gbkey=CDS;go_function=ATP binding|0005524||IEA,transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211034.1;locus_tag=AD853_RS05205;product=ABC transporter permease;protein_id=WP_002211034.1;transl_table=11 NZ_CPUY01000004.1 RefSeq gene 63427 64245 . + . ID=gene-AD853_RS05210;Name=AD853_RS05210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS05210;old_locus_tag=ERS008462_01054 NZ_CPUY01000004.1 Protein Homology CDS 63427 64245 . + 0 ID=cds-WP_002223602.1;Parent=gene-AD853_RS05210;Dbxref=GenBank:WP_002223602.1;Name=WP_002223602.1;Ontology_term=GO:0006810,GO:0005215,GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=transporter activity|0005215||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304053.1;locus_tag=AD853_RS05210;product=ABC transporter ATP-binding protein;protein_id=WP_002223602.1;transl_table=11 NZ_CPUY01000004.1 RefSeq gene 64670 66160 . - . ID=gene-AD853_RS05215;Name=AD853_RS05215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS05215;old_locus_tag=ERS008462_01055 NZ_CPUY01000004.1 Protein Homology CDS 64670 66160 . - 0 ID=cds-WP_002223601.1;Parent=gene-AD853_RS05215;Dbxref=GenBank:WP_002223601.1;Name=WP_002223601.1;Ontology_term=GO:0009116,GO:0044209,GO:0008714;gbkey=CDS;go_function=AMP nucleosidase activity|0008714||IEA;go_process=nucleoside metabolic process|0009116||IEA,AMP salvage|0044209||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002223601.1;locus_tag=AD853_RS05215;product=AMP nucleosidase;protein_id=WP_002223601.1;transl_table=11 NZ_CPUY01000004.1 RefSeq gene 66366 67802 . + . ID=gene-AD853_RS05220;Name=AD853_RS05220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS05220;old_locus_tag=ERS008462_01056 NZ_CPUY01000004.1 Protein Homology CDS 66366 67802 . + 0 ID=cds-WP_038824926.1;Parent=gene-AD853_RS05220;Dbxref=GenBank:WP_038824926.1;Name=WP_038824926.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211031.1;locus_tag=AD853_RS05220;product=SrfA family protein;protein_id=WP_038824926.1;transl_table=11 NZ_CPUY01000004.1 RefSeq pseudogene 67807 70865 . + . ID=gene-AD853_RS05225;Name=AD853_RS05225;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD853_RS05225;pseudo=true NZ_CPUY01000004.1 Protein Homology CDS 67807 70865 . + 0 ID=cds-AD853_RS05225;Parent=gene-AD853_RS05225;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002421865.1;locus_tag=AD853_RS05225;product=virulence factor SrfB;pseudo=true;transl_table=11 NZ_CPUY01000004.1 RefSeq gene 70862 73402 . + . ID=gene-AD853_RS05230;Name=AD853_RS05230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS05230;old_locus_tag=ERS008462_01059 NZ_CPUY01000004.1 Protein Homology CDS 70862 73402 . + 0 ID=cds-WP_038824923.1;Parent=gene-AD853_RS05230;Dbxref=GenBank:WP_038824923.1;Name=WP_038824923.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016598681.1;locus_tag=AD853_RS05230;product=putative virulence factor;protein_id=WP_038824923.1;transl_table=11 NZ_CPUY01000004.1 RefSeq gene 73571 74365 . - . ID=gene-AD853_RS05235;Name=AD853_RS05235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS05235;old_locus_tag=ERS008462_01060 NZ_CPUY01000004.1 Protein Homology CDS 73571 74365 . - 0 ID=cds-WP_012304048.1;Parent=gene-AD853_RS05235;Dbxref=GenBank:WP_012304048.1;Name=WP_012304048.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012413742.1;locus_tag=AD853_RS05235;product=DUF1460 domain-containing protein;protein_id=WP_012304048.1;transl_table=11 NZ_CPUY01000004.1 RefSeq gene 74644 74766 . + . ID=gene-AD853_RS22450;Name=AD853_RS22450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS22450 NZ_CPUY01000004.1 Protein Homology CDS 74644 74766 . + 0 ID=cds-WP_113773041.1;Parent=gene-AD853_RS22450;Dbxref=GenBank:WP_113773041.1;Name=WP_113773041.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002264692.1;locus_tag=AD853_RS22450;product=gluconate 5-dehydrogenase;protein_id=WP_113773041.1;transl_table=11 NZ_CPUY01000004.1 RefSeq gene 74904 74999 . + . ID=gene-AD853_RS20315;Name=ivbL;gbkey=Gene;gene=ivbL;gene_biotype=protein_coding;locus_tag=AD853_RS20315 NZ_CPUY01000004.1 Protein Homology CDS 74904 74999 . + 0 ID=cds-WP_002232808.1;Parent=gene-AD853_RS20315;Dbxref=GenBank:WP_002232808.1;Name=WP_002232808.1;gbkey=CDS;gene=ivbL;inference=COORDINATES: protein motif:HMM:NF019661.6;locus_tag=AD853_RS20315;product=ilvB operon leader peptide IvbL;protein_id=WP_002232808.1;transl_table=11 NZ_CPUY01000004.1 RefSeq pseudogene 75109 76688 . + . ID=gene-AD853_RS05240;Name=AD853_RS05240;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD853_RS05240;pseudo=true NZ_CPUY01000004.1 Protein Homology CDS 75109 76688 . + 0 ID=cds-AD853_RS05240;Parent=gene-AD853_RS05240;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019079406.1;locus_tag=AD853_RS05240;product=acetolactate synthase large subunit;pseudo=true;transl_table=11 NZ_CPUY01000004.1 RefSeq gene 76690 77037 . + . ID=gene-AD853_RS05245;Name=ilvN;gbkey=Gene;gene=ilvN;gene_biotype=protein_coding;locus_tag=AD853_RS05245;old_locus_tag=ERS008462_01063 NZ_CPUY01000004.1 Protein Homology CDS 76690 77037 . + 0 ID=cds-WP_002230908.1;Parent=gene-AD853_RS05245;Dbxref=GenBank:WP_002230908.1;Name=WP_002230908.1;gbkey=CDS;gene=ilvN;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002230908.1;locus_tag=AD853_RS05245;product=acetolactate synthase small subunit;protein_id=WP_002230908.1;transl_table=11 NZ_CPUY01000004.1 RefSeq gene 77104 77778 . - . ID=gene-AD853_RS05250;Name=yjjG;gbkey=Gene;gene=yjjG;gene_biotype=protein_coding;locus_tag=AD853_RS05250;old_locus_tag=ERS008462_01064 NZ_CPUY01000004.1 Protein Homology CDS 77104 77778 . - 0 ID=cds-WP_038824092.1;Parent=gene-AD853_RS05250;Dbxref=GenBank:WP_038824092.1;Name=WP_038824092.1;Ontology_term=GO:0008253;gbkey=CDS;gene=yjjG;go_function=5'-nucleotidase activity|0008253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002359373.1;locus_tag=AD853_RS05250;product=pyrimidine 5'-nucleotidase;protein_id=WP_038824092.1;transl_table=11 NZ_CPUY01000004.1 RefSeq gene 77909 80305 . - . ID=gene-AD853_RS20320;Name=AD853_RS20320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS20320;old_locus_tag=ERS008462_01065 NZ_CPUY01000004.1 Protein Homology CDS 77909 80305 . - 0 ID=cds-WP_071990076.1;Parent=gene-AD853_RS20320;Dbxref=GenBank:WP_071990076.1;Name=WP_071990076.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015683612.1;locus_tag=AD853_RS20320;product=tellurite resistance TerB family protein;protein_id=WP_071990076.1;transl_table=11 NZ_CPUY01000004.1 RefSeq gene 80852 82297 . - . ID=gene-AD853_RS05265;Name=phoA;gbkey=Gene;gene=phoA;gene_biotype=protein_coding;locus_tag=AD853_RS05265;old_locus_tag=ERS008462_01066 NZ_CPUY01000004.1 Protein Homology CDS 80852 82297 . - 0 ID=cds-WP_038824972.1;Parent=gene-AD853_RS05265;Dbxref=GenBank:WP_038824972.1;Name=WP_038824972.1;Ontology_term=GO:0016791;gbkey=CDS;gene=phoA;go_function=phosphatase activity|0016791||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211024.1;locus_tag=AD853_RS05265;product=alkaline phosphatase;protein_id=WP_038824972.1;transl_table=11 NZ_CPUY01000004.1 RefSeq gene 82555 83073 . + . ID=gene-AD853_RS05270;Name=ogt;gbkey=Gene;gene=ogt;gene_biotype=protein_coding;locus_tag=AD853_RS05270;old_locus_tag=ERS008462_01067 NZ_CPUY01000004.1 Protein Homology CDS 82555 83073 . + 0 ID=cds-WP_002211023.1;Parent=gene-AD853_RS05270;Dbxref=GenBank:WP_002211023.1;Name=WP_002211023.1;Ontology_term=GO:0006281,GO:0003908;gbkey=CDS;gene=ogt;go_function=methylated-DNA-[protein]-cysteine S-methyltransferase activity|0003908||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211023.1;locus_tag=AD853_RS05270;product=methylated-DNA--[protein]-cysteine S-methyltransferase;protein_id=WP_002211023.1;transl_table=11 NZ_CPUY01000004.1 RefSeq gene 83146 83898 . + . ID=gene-AD853_RS05275;Name=AD853_RS05275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS05275;old_locus_tag=ERS008462_01068 NZ_CPUY01000004.1 Protein Homology CDS 83146 83898 . + 0 ID=cds-WP_011192502.1;Parent=gene-AD853_RS05275;Dbxref=GenBank:WP_011192502.1;Name=WP_011192502.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192502.1;locus_tag=AD853_RS05275;product=FNR family transcription factor;protein_id=WP_011192502.1;transl_table=11 NZ_CPUY01000004.1 RefSeq gene 84033 84989 . + . ID=gene-AD853_RS05280;Name=uspE;gbkey=Gene;gene=uspE;gene_biotype=protein_coding;locus_tag=AD853_RS05280;old_locus_tag=ERS008462_01069 NZ_CPUY01000004.1 Protein Homology CDS 84033 84989 . + 0 ID=cds-WP_002211021.1;Parent=gene-AD853_RS05280;Dbxref=GenBank:WP_002211021.1;Name=WP_002211021.1;gbkey=CDS;gene=uspE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002228471.1;locus_tag=AD853_RS05280;product=universal stress protein UspE;protein_id=WP_002211021.1;transl_table=11 NZ_CPUY01000004.1 RefSeq gene 85080 86474 . - . ID=gene-AD853_RS05285;Name=pntB;gbkey=Gene;gene=pntB;gene_biotype=protein_coding;locus_tag=AD853_RS05285;old_locus_tag=ERS008462_01070 NZ_CPUY01000004.1 Protein Homology CDS 85080 86474 . - 0 ID=cds-WP_002211020.1;Parent=gene-AD853_RS05285;Dbxref=GenBank:WP_002211020.1;Name=WP_002211020.1;Ontology_term=GO:0008750,GO:0050661,GO:0016020;gbkey=CDS;gene=pntB;go_component=membrane|0016020||IEA;go_function=proton-translocating NAD(P)+ transhydrogenase activity|0008750||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211020.1;locus_tag=AD853_RS05285;product=Re/Si-specific NAD(P)(+) transhydrogenase subunit beta;protein_id=WP_002211020.1;transl_table=11 NZ_CPUY01000004.1 RefSeq gene 86547 88073 . - . ID=gene-AD853_RS05290;Name=pntA;gbkey=Gene;gene=pntA;gene_biotype=protein_coding;locus_tag=AD853_RS05290;old_locus_tag=ERS008462_01071 NZ_CPUY01000004.1 Protein Homology CDS 86547 88073 . - 0 ID=cds-WP_038824970.1;Parent=gene-AD853_RS05290;Dbxref=GenBank:WP_038824970.1;Name=WP_038824970.1;Ontology_term=GO:1902600,GO:0008750;gbkey=CDS;gene=pntA;go_function=proton-translocating NAD(P)+ transhydrogenase activity|0008750||IEA;go_process=proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016150210.1;locus_tag=AD853_RS05290;product=Re/Si-specific NAD(P)(+) transhydrogenase subunit alpha;protein_id=WP_038824970.1;transl_table=11 NZ_CPUY01000004.1 RefSeq gene 88194 88397 . - . ID=gene-AD853_RS22045;Name=AD853_RS22045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS22045 NZ_CPUY01000004.1 Protein Homology CDS 88194 88397 . - 0 ID=cds-WP_011192504.1;Parent=gene-AD853_RS22045;Dbxref=GenBank:WP_011192504.1;Name=WP_011192504.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002227912.1;locus_tag=AD853_RS22045;product=hypothetical protein;protein_id=WP_011192504.1;transl_table=11 NZ_CPUY01000004.1 RefSeq gene 88603 89556 . + . ID=gene-AD853_RS05300;Name=ydgH;gbkey=Gene;gene=ydgH;gene_biotype=protein_coding;locus_tag=AD853_RS05300;old_locus_tag=ERS008462_01072 NZ_CPUY01000004.1 Protein Homology CDS 88603 89556 . + 0 ID=cds-WP_002211018.1;Parent=gene-AD853_RS05300;Dbxref=GenBank:WP_002211018.1;Name=WP_002211018.1;gbkey=CDS;gene=ydgH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304045.1;locus_tag=AD853_RS05300;product=DUF1471 family protein YdgH;protein_id=WP_002211018.1;transl_table=11 NZ_CPUY01000004.1 RefSeq gene 89826 91217 . + . ID=gene-AD853_RS05305;Name=AD853_RS05305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS05305;old_locus_tag=ERS008462_01073 NZ_CPUY01000004.1 Protein Homology CDS 89826 91217 . + 0 ID=cds-WP_002211017.1;Parent=gene-AD853_RS05305;Dbxref=GenBank:WP_002211017.1;Name=WP_002211017.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211017.1;locus_tag=AD853_RS05305;product=amino acid permease;protein_id=WP_002211017.1;transl_table=11 NZ_CPUY01000004.1 RefSeq gene 91241 91657 . - . ID=gene-AD853_RS05310;Name=AD853_RS05310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS05310;old_locus_tag=ERS008462_01074 NZ_CPUY01000004.1 Protein Homology CDS 91241 91657 . - 0 ID=cds-WP_002211016.1;Parent=gene-AD853_RS05310;Dbxref=GenBank:WP_002211016.1;Name=WP_002211016.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211016.1;locus_tag=AD853_RS05310;product=hypothetical protein;protein_id=WP_002211016.1;transl_table=11 NZ_CPUY01000004.1 RefSeq gene 91954 92700 . + . ID=gene-AD853_RS05315;Name=rstA;gbkey=Gene;gene=rstA;gene_biotype=protein_coding;locus_tag=AD853_RS05315;old_locus_tag=ERS008462_01075 NZ_CPUY01000004.1 Protein Homology CDS 91954 92700 . + 0 ID=cds-WP_002211015.1;Parent=gene-AD853_RS05315;Dbxref=GenBank:WP_002211015.1;Name=WP_002211015.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=rstA;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211015.1;locus_tag=AD853_RS05315;product=two-component system response regulator RstA;protein_id=WP_002211015.1;transl_table=11 NZ_CPUY01000004.1 RefSeq pseudogene 92700 94025 . + . ID=gene-AD853_RS05320;Name=rstB;gbkey=Gene;gene=rstB;gene_biotype=pseudogene;locus_tag=AD853_RS05320;pseudo=true NZ_CPUY01000004.1 Protein Homology CDS 92700 94025 . + 0 ID=cds-AD853_RS05320;Parent=gene-AD853_RS05320;Note=internal stop;Ontology_term=GO:0007165,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=rstB;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192505.1;locus_tag=AD853_RS05320;product=two-component system sensor histidine kinase RstB;pseudo=true;transl_table=11 NZ_CPUY01000004.1 RefSeq gene 94103 95602 . + . ID=gene-AD853_RS05325;Name=AD853_RS05325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS05325;old_locus_tag=ERS008462_01078 NZ_CPUY01000004.1 Protein Homology CDS 94103 95602 . + 0 ID=cds-WP_038825089.1;Parent=gene-AD853_RS05325;Dbxref=GenBank:WP_038825089.1;Name=WP_038825089.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304044.1;locus_tag=AD853_RS05325;product=carboxypeptidase M32;protein_id=WP_038825089.1;transl_table=11 NZ_CPUY01000004.1 RefSeq gene 96441 99425 . + . ID=gene-AD853_RS05330;Name=AD853_RS05330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS05330;old_locus_tag=ERS008462_01079 NZ_CPUY01000004.1 Protein Homology CDS 96441 99425 . + 0 ID=cds-WP_038825612.1;Parent=gene-AD853_RS05330;Dbxref=GenBank:WP_038825612.1;Name=WP_038825612.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012413746.1;locus_tag=AD853_RS05330;product=RHS repeat-associated core domain-containing protein;protein_id=WP_038825612.1;transl_table=11 NZ_CPUY01000004.1 RefSeq pseudogene 99536 99688 . - . ID=gene-AD853_RS20330;Name=AD853_RS20330;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD853_RS20330;partial=true;pseudo=true;start_range=.,99536 NZ_CPUY01000004.1 Protein Homology CDS 99536 99688 . - 0 ID=cds-AD853_RS20330;Parent=gene-AD853_RS20330;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002214618.1;locus_tag=AD853_RS20330;partial=true;product=invertase;pseudo=true;start_range=.,99536;transl_table=11 NZ_CPUY01000004.1 RefSeq gene 100067 100645 . - . ID=gene-AD853_RS05335;Name=AD853_RS05335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS05335;old_locus_tag=ERS008462_01080 NZ_CPUY01000004.1 Protein Homology CDS 100067 100645 . - 0 ID=cds-WP_002211011.1;Parent=gene-AD853_RS05335;Dbxref=GenBank:WP_002211011.1;Name=WP_002211011.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211011.1;locus_tag=AD853_RS05335;product=YceI family protein;protein_id=WP_002211011.1;transl_table=11 NZ_CPUY01000004.1 RefSeq gene 100671 101225 . - . ID=gene-AD853_RS05340;Name=AD853_RS05340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS05340;old_locus_tag=ERS008462_01081 NZ_CPUY01000004.1 Protein Homology CDS 100671 101225 . - 0 ID=cds-WP_002211010.1;Parent=gene-AD853_RS05340;Dbxref=GenBank:WP_002211010.1;Name=WP_002211010.1;Ontology_term=GO:0022904,GO:0009055,GO:0020037,GO:0046872,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA;go_process=respiratory electron transport chain|0022904||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012229608.1;locus_tag=AD853_RS05340;product=cytochrome b;protein_id=WP_002211010.1;transl_table=11 NZ_CPUY01000004.1 RefSeq gene 101829 102131 . + . ID=gene-AD853_RS05350;Name=asr;gbkey=Gene;gene=asr;gene_biotype=protein_coding;locus_tag=AD853_RS05350;old_locus_tag=ERS008462_01082 NZ_CPUY01000004.1 Protein Homology CDS 101829 102131 . + 0 ID=cds-WP_038831563.1;Parent=gene-AD853_RS05350;Dbxref=GenBank:WP_038831563.1;Name=WP_038831563.1;gbkey=CDS;gene=asr;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211009.1;locus_tag=AD853_RS05350;product=acid resistance repetitive basic protein Asr;protein_id=WP_038831563.1;transl_table=11 NZ_CPUY01000004.1 RefSeq gene 102239 102319 . + . ID=gene-AD853_RS22735;Name=ydgU;gbkey=Gene;gene=ydgU;gene_biotype=protein_coding;locus_tag=AD853_RS22735 NZ_CPUY01000004.1 Protein Homology CDS 102239 102319 . + 0 ID=cds-WP_002214611.1;Parent=gene-AD853_RS22735;Dbxref=GenBank:WP_002214611.1;Name=WP_002214611.1;gbkey=CDS;gene=ydgU;inference=COORDINATES: protein motif:HMM:NF052476.1;locus_tag=AD853_RS22735;product=small membrane protein YdgU;protein_id=WP_002214611.1;transl_table=11 NZ_CPUY01000004.1 RefSeq gene 102465 103301 . + . ID=gene-AD853_RS05355;Name=AD853_RS05355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS05355;old_locus_tag=ERS008462_01083 NZ_CPUY01000004.1 Protein Homology CDS 102465 103301 . + 0 ID=cds-WP_012304042.1;Parent=gene-AD853_RS05355;Dbxref=GenBank:WP_012304042.1;Name=WP_012304042.1;Ontology_term=GO:0006508,GO:0004252,GO:0008233,GO:0008236;gbkey=CDS;go_function=serine-type endopeptidase activity|0004252||IEA,peptidase activity|0008233||IEA,serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211008.1;locus_tag=AD853_RS05355;product=trypsin-like serine peptidase;protein_id=WP_012304042.1;transl_table=11 NZ_CPUY01000004.1 RefSeq gene 103357 103680 . - . ID=gene-AD853_RS05360;Name=AD853_RS05360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS05360;old_locus_tag=ERS008462_01084 NZ_CPUY01000004.1 Protein Homology CDS 103357 103680 . - 0 ID=cds-WP_002211007.1;Parent=gene-AD853_RS05360;Dbxref=GenBank:WP_002211007.1;Name=WP_002211007.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015683613.1;locus_tag=AD853_RS05360;product=helix-turn-helix domain-containing protein;protein_id=WP_002211007.1;transl_table=11 NZ_CPUY01000004.1 RefSeq gene 103677 104006 . - . ID=gene-AD853_RS05365;Name=AD853_RS05365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS05365;old_locus_tag=ERS008462_01085 NZ_CPUY01000004.1 Protein Homology CDS 103677 104006 . - 0 ID=cds-WP_038399801.1;Parent=gene-AD853_RS05365;Dbxref=GenBank:WP_038399801.1;Name=WP_038399801.1;Ontology_term=GO:0004519,GO:0090729,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=endonuclease activity|0004519||IEA,toxin activity|0090729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015683954.1;locus_tag=AD853_RS05365;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_038399801.1;transl_table=11 NZ_CPUY01000004.1 RefSeq gene 104345 108232 . - . ID=gene-AD853_RS05370;Name=hrpA;gbkey=Gene;gene=hrpA;gene_biotype=protein_coding;locus_tag=AD853_RS05370;old_locus_tag=ERS008462_01086 NZ_CPUY01000004.1 Protein Homology CDS 104345 108232 . - 0 ID=cds-WP_012105055.1;Parent=gene-AD853_RS05370;Dbxref=GenBank:WP_012105055.1;Name=WP_012105055.1;Ontology_term=GO:0003676,GO:0003724,GO:0005524;gbkey=CDS;gene=hrpA;go_function=nucleic acid binding|0003676||IEA,RNA helicase activity|0003724||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004874315.1;locus_tag=AD853_RS05370;product=ATP-dependent RNA helicase HrpA;protein_id=WP_012105055.1;transl_table=11 NZ_CPUY01000004.1 RefSeq gene 108584 109189 . + . ID=gene-AD853_RS05375;Name=azoR;gbkey=Gene;gene=azoR;gene_biotype=protein_coding;locus_tag=AD853_RS05375;old_locus_tag=ERS008462_01087 NZ_CPUY01000004.1 Protein Homology CDS 108584 109189 . + 0 ID=cds-WP_002211004.1;Parent=gene-AD853_RS05375;Dbxref=GenBank:WP_002211004.1;Name=WP_002211004.1;gbkey=CDS;gene=azoR;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226683.1;locus_tag=AD853_RS05375;product=FMN-dependent NADH-azoreductase;protein_id=WP_002211004.1;transl_table=11 NZ_CPUY01000004.1 RefSeq gene 109310 110266 . - . ID=gene-AD853_RS05380;Name=AD853_RS05380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS05380;old_locus_tag=ERS008462_01088 NZ_CPUY01000004.1 Protein Homology CDS 109310 110266 . - 0 ID=cds-WP_032466440.1;Parent=gene-AD853_RS05380;Dbxref=GenBank:WP_032466440.1;Name=WP_032466440.1;Ontology_term=GO:0006355,GO:0003677,GO:0030246;gbkey=CDS;go_function=DNA binding|0003677||IEA,carbohydrate binding|0030246||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211003.1;locus_tag=AD853_RS05380;product=sugar-binding transcriptional regulator;protein_id=WP_032466440.1;transl_table=11 NZ_CPUY01000004.1 RefSeq gene 110476 111867 . + . ID=gene-AD853_RS05385;Name=dalD;gbkey=Gene;gene=dalD;gene_biotype=protein_coding;locus_tag=AD853_RS05385;old_locus_tag=ERS008462_01089 NZ_CPUY01000004.1 Protein Homology CDS 110476 111867 . + 0 ID=cds-WP_038825199.1;Parent=gene-AD853_RS05385;Dbxref=GenBank:WP_038825199.1;Name=WP_038825199.1;Ontology_term=GO:0019527,GO:0047813;gbkey=CDS;gene=dalD;go_function=D-arabinitol 4-dehydrogenase activity|0047813||IEA;go_process=pentitol catabolic process|0019527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304041.1;locus_tag=AD853_RS05385;product=D-arabinitol 4-dehydrogenase;protein_id=WP_038825199.1;transl_table=11 NZ_CPUY01000004.1 RefSeq gene 112086 112457 . - . ID=gene-AD853_RS05390;Name=AD853_RS05390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS05390;old_locus_tag=ERS008462_01090 NZ_CPUY01000004.1 Protein Homology CDS 112086 112457 . - 0 ID=cds-WP_002211001.1;Parent=gene-AD853_RS05390;Dbxref=GenBank:WP_002211001.1;Name=WP_002211001.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304040.1;locus_tag=AD853_RS05390;product=YdbL family probable chaperone protein;protein_id=WP_002211001.1;transl_table=11 NZ_CPUY01000004.1 RefSeq gene 112467 112661 . - . ID=gene-AD853_RS05395;Name=AD853_RS05395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS05395;old_locus_tag=ERS008462_01091 NZ_CPUY01000004.1 Protein Homology CDS 112467 112661 . - 0 ID=cds-WP_002211000.1;Parent=gene-AD853_RS05395;Dbxref=GenBank:WP_002211000.1;Name=WP_002211000.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005169621.1;locus_tag=AD853_RS05395;product=YnbE family lipoprotein;protein_id=WP_002211000.1;transl_table=11 NZ_CPUY01000004.1 RefSeq gene 112658 115354 . - . ID=gene-AD853_RS05400;Name=AD853_RS05400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS05400;old_locus_tag=ERS008462_01092 NZ_CPUY01000004.1 Protein Homology CDS 112658 115354 . - 0 ID=cds-WP_038825232.1;Parent=gene-AD853_RS05400;Dbxref=GenBank:WP_038825232.1;Name=WP_038825232.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210999.1;locus_tag=AD853_RS05400;product=YdbH family protein;protein_id=WP_038825232.1;transl_table=11 NZ_CPUY01000004.1 RefSeq gene 115609 116601 . + . ID=gene-AD853_RS05405;Name=AD853_RS05405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS05405;old_locus_tag=ERS008462_01093 NZ_CPUY01000004.1 Protein Homology CDS 115609 116601 . + 0 ID=cds-WP_012105052.1;Parent=gene-AD853_RS05405;Dbxref=GenBank:WP_012105052.1;Name=WP_012105052.1;Ontology_term=GO:0008720,GO:0070404;gbkey=CDS;go_function=D-lactate dehydrogenase (NAD+) activity|0008720||IEA,NADH binding|0070404||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210998.1;locus_tag=AD853_RS05405;product=2-hydroxyacid dehydrogenase;protein_id=WP_012105052.1;transl_table=11 NZ_CPUY01000004.1 RefSeq gene 116671 117123 . + . ID=gene-AD853_RS05410;Name=hslJ;gbkey=Gene;gene=hslJ;gene_biotype=protein_coding;locus_tag=AD853_RS05410;old_locus_tag=ERS008462_01094 NZ_CPUY01000004.1 Protein Homology CDS 116671 117123 . + 0 ID=cds-WP_012105050.1;Parent=gene-AD853_RS05410;Dbxref=GenBank:WP_012105050.1;Name=WP_012105050.1;gbkey=CDS;gene=hslJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105050.1;locus_tag=AD853_RS05410;product=heat shock protein HslJ;protein_id=WP_012105050.1;transl_table=11 NZ_CPUY01000004.1 RefSeq gene 117181 117522 . - . ID=gene-AD853_RS05415;Name=AD853_RS05415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS05415;old_locus_tag=ERS008462_01095 NZ_CPUY01000004.1 Protein Homology CDS 117181 117522 . - 0 ID=cds-WP_012413750.1;Parent=gene-AD853_RS05415;Dbxref=GenBank:WP_012413750.1;Name=WP_012413750.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012413750.1;locus_tag=AD853_RS05415;product=putative hemolysin;protein_id=WP_012413750.1;transl_table=11 NZ_CPUY01000004.1 RefSeq gene 117808 118467 . + . ID=gene-AD853_RS05420;Name=AD853_RS05420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS05420;old_locus_tag=ERS008462_01096 NZ_CPUY01000004.1 Protein Homology CDS 117808 118467 . + 0 ID=cds-WP_002210995.1;Parent=gene-AD853_RS05420;Dbxref=GenBank:WP_002210995.1;Name=WP_002210995.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004702111.1;locus_tag=AD853_RS05420;product=MgtC/SapB family protein;protein_id=WP_002210995.1;transl_table=11 NZ_CPUY01000004.1 RefSeq gene 118527 118859 . - . ID=gene-AD853_RS05425;Name=AD853_RS05425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS05425;old_locus_tag=ERS008462_01097 NZ_CPUY01000004.1 Protein Homology CDS 118527 118859 . - 0 ID=cds-WP_002210994.1;Parent=gene-AD853_RS05425;Dbxref=GenBank:WP_002210994.1;Name=WP_002210994.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015059047.1;locus_tag=AD853_RS05425;product=DMT family transporter;protein_id=WP_002210994.1;transl_table=11 NZ_CPUY01000004.1 RefSeq gene 119338 122871 . + . ID=gene-AD853_RS05430;Name=nifJ;gbkey=Gene;gene=nifJ;gene_biotype=protein_coding;locus_tag=AD853_RS05430;old_locus_tag=ERS008462_01098 NZ_CPUY01000004.1 Protein Homology CDS 119338 122871 . + 0 ID=cds-WP_038825233.1;Parent=gene-AD853_RS05430;Dbxref=GenBank:WP_038825233.1;Name=WP_038825233.1;Ontology_term=GO:0022900,GO:0005506,GO:0016903,GO:0030976;gbkey=CDS;gene=nifJ;go_function=iron ion binding|0005506||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors|0016903||IEA,thiamine pyrophosphate binding|0030976||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002423411.1;locus_tag=AD853_RS05430;product=pyruvate:ferredoxin (flavodoxin) oxidoreductase;protein_id=WP_038825233.1;transl_table=11 NZ_CPUY01000004.1 RefSeq gene 123139 124080 . + . ID=gene-AD853_RS05435;Name=ttcA;gbkey=Gene;gene=ttcA;gene_biotype=protein_coding;locus_tag=AD853_RS05435;old_locus_tag=ERS008462_01099 NZ_CPUY01000004.1 Protein Homology CDS 123139 124080 . + 0 ID=cds-WP_002210992.1;Parent=gene-AD853_RS05435;Dbxref=GenBank:WP_002210992.1;Name=WP_002210992.1;Ontology_term=GO:0008033;gbkey=CDS;gene=ttcA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011093557.1;locus_tag=AD853_RS05435;product=tRNA 2-thiocytidine(32) synthetase TtcA;protein_id=WP_002210992.1;transl_table=11 NZ_CPUY01000004.1 RefSeq gene 124402 125370 . + . ID=gene-AD853_RS05440;Name=AD853_RS05440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS05440;old_locus_tag=ERS008462_01100 NZ_CPUY01000004.1 Protein Homology CDS 124402 125370 . + 0 ID=cds-WP_162007547.1;Parent=gene-AD853_RS05440;Dbxref=GenBank:WP_162007547.1;Name=WP_162007547.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002222427.1;locus_tag=AD853_RS05440;product=alpha/beta hydrolase;protein_id=WP_162007547.1;transl_table=11 NZ_CPUY01000004.1 RefSeq gene 125682 126521 . + . ID=gene-AD853_RS05445;Name=AD853_RS05445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS05445;old_locus_tag=ERS008462_01102 NZ_CPUY01000004.1 Protein Homology CDS 125682 126521 . + 0 ID=cds-WP_012105047.1;Parent=gene-AD853_RS05445;Dbxref=GenBank:WP_012105047.1;Name=WP_012105047.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304035.1;locus_tag=AD853_RS05445;product=MerR family transcriptional regulator;protein_id=WP_012105047.1;transl_table=11 NZ_CPUY01000004.1 RefSeq gene 126895 127878 . - . ID=gene-AD853_RS05455;Name=zntB;gbkey=Gene;gene=zntB;gene_biotype=protein_coding;locus_tag=AD853_RS05455;old_locus_tag=ERS008462_01104 NZ_CPUY01000004.1 Protein Homology CDS 126895 127878 . - 0 ID=cds-WP_038823934.1;Parent=gene-AD853_RS05455;Dbxref=GenBank:WP_038823934.1;Name=WP_038823934.1;Ontology_term=GO:0071577,GO:0005385,GO:0005886;gbkey=CDS;gene=zntB;go_component=plasma membrane|0005886||IEA;go_function=zinc ion transmembrane transporter activity|0005385||IEA;go_process=zinc ion transmembrane transport|0071577||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004702124.1;locus_tag=AD853_RS05455;product=zinc transporter ZntB;protein_id=WP_038823934.1;transl_table=11 NZ_CPUY01000004.1 RefSeq gene 128121 129737 . - . ID=gene-AD853_RS05460;Name=AD853_RS05460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS05460;old_locus_tag=ERS008462_01105 NZ_CPUY01000004.1 Protein Homology CDS 128121 129737 . - 0 ID=cds-WP_012105046.1;Parent=gene-AD853_RS05460;Dbxref=GenBank:WP_012105046.1;Name=WP_012105046.1;Ontology_term=GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004702130.1;locus_tag=AD853_RS05460;product=peptide ABC transporter substrate-binding protein;protein_id=WP_012105046.1;transl_table=11 NZ_CPUY01000004.1 RefSeq gene 130177 130884 . + . ID=gene-AD853_RS05465;Name=mpaA;gbkey=Gene;gene=mpaA;gene_biotype=protein_coding;locus_tag=AD853_RS05465;old_locus_tag=ERS008462_01106 NZ_CPUY01000004.1 Protein Homology CDS 130177 130884 . + 0 ID=cds-WP_038823925.1;Parent=gene-AD853_RS05465;Dbxref=GenBank:WP_038823925.1;Name=WP_038823925.1;Ontology_term=GO:0006508,GO:0004181,GO:0008270;gbkey=CDS;gene=mpaA;go_function=metallocarboxypeptidase activity|0004181||IEA,zinc ion binding|0008270||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002220315.1;locus_tag=AD853_RS05465;product=murein tripeptide amidase MpaA;protein_id=WP_038823925.1;transl_table=11 NZ_CPUY01000004.1 RefSeq gene 130926 131900 . - . ID=gene-AD853_RS05470;Name=ycjG;gbkey=Gene;gene=ycjG;gene_biotype=protein_coding;locus_tag=AD853_RS05470;old_locus_tag=ERS008462_01107 NZ_CPUY01000004.1 Protein Homology CDS 130926 131900 . - 0 ID=cds-WP_002210985.1;Parent=gene-AD853_RS05470;Dbxref=GenBank:WP_002210985.1;Name=WP_002210985.1;Ontology_term=GO:0009063,GO:0016855;gbkey=CDS;gene=ycjG;go_function=racemase and epimerase activity%2C acting on amino acids and derivatives|0016855||IEA;go_process=amino acid catabolic process|0009063||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015683616.1;locus_tag=AD853_RS05470;product=L-Ala-D/L-Glu epimerase;protein_id=WP_002210985.1;transl_table=11 NZ_CPUY01000004.1 RefSeq gene 132063 132566 . + . ID=gene-AD853_RS05475;Name=tpx;gbkey=Gene;gene=tpx;gene_biotype=protein_coding;locus_tag=AD853_RS05475;old_locus_tag=ERS008462_01108 NZ_CPUY01000004.1 Protein Homology CDS 132063 132566 . + 0 ID=cds-WP_002210984.1;Parent=gene-AD853_RS05475;Dbxref=GenBank:WP_002210984.1;Name=WP_002210984.1;Ontology_term=GO:0008379,GO:0016684;gbkey=CDS;gene=tpx;go_function=thioredoxin peroxidase activity|0008379||IEA,oxidoreductase activity%2C acting on peroxide as acceptor|0016684||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019083075.1;locus_tag=AD853_RS05475;product=thiol peroxidase;protein_id=WP_002210984.1;transl_table=11 NZ_CPUY01000004.1 RefSeq gene 132713 134290 . - . ID=gene-AD853_RS05480;Name=tyrR;gbkey=Gene;gene=tyrR;gene_biotype=protein_coding;locus_tag=AD853_RS05480;old_locus_tag=ERS008462_01109 NZ_CPUY01000004.1 Protein Homology CDS 132713 134290 . - 0 ID=cds-WP_038823926.1;Parent=gene-AD853_RS05480;Dbxref=GenBank:WP_038823926.1;Name=WP_038823926.1;Ontology_term=GO:0006355,GO:0008134;gbkey=CDS;gene=tyrR;go_function=transcription factor binding|0008134||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210983.1;locus_tag=AD853_RS05480;product=transcriptional regulator TyrR;protein_id=WP_038823926.1;transl_table=11 NZ_CPUY01000004.1 RefSeq gene 134627 135073 . + . ID=gene-AD853_RS05485;Name=AD853_RS05485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS05485;old_locus_tag=ERS008462_01110 NZ_CPUY01000004.1 Protein Homology CDS 134627 135073 . + 0 ID=cds-WP_038823927.1;Parent=gene-AD853_RS05485;Dbxref=GenBank:WP_038823927.1;Name=WP_038823927.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005169556.1;locus_tag=AD853_RS05485;product=DUF2384 domain-containing protein;protein_id=WP_038823927.1;transl_table=11 NZ_CPUY01000004.1 RefSeq gene 135135 135593 . + . ID=gene-AD853_RS05490;Name=AD853_RS05490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS05490;old_locus_tag=ERS008462_01111 NZ_CPUY01000004.1 Protein Homology CDS 135135 135593 . + 0 ID=cds-WP_002210981.1;Parent=gene-AD853_RS05490;Dbxref=GenBank:WP_002210981.1;Name=WP_002210981.1;Ontology_term=GO:0016779;gbkey=CDS;go_function=nucleotidyltransferase activity|0016779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192520.1;locus_tag=AD853_RS05490;product=RES family NAD+ phosphorylase;protein_id=WP_002210981.1;transl_table=11 NZ_CPUY01000004.1 RefSeq gene 135603 136664 . - . ID=gene-AD853_RS05495;Name=AD853_RS05495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS05495;old_locus_tag=ERS008462_01112 NZ_CPUY01000004.1 Protein Homology CDS 135603 136664 . - 0 ID=cds-WP_012105044.1;Parent=gene-AD853_RS05495;Dbxref=GenBank:WP_012105044.1;Name=WP_012105044.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105044.1;locus_tag=AD853_RS05495;product=YcjF family protein;protein_id=WP_012105044.1;transl_table=11 NZ_CPUY01000004.1 RefSeq gene 136661 138058 . - . ID=gene-AD853_RS05500;Name=AD853_RS05500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS05500;old_locus_tag=ERS008462_01113 NZ_CPUY01000004.1 Protein Homology CDS 136661 138058 . - 0 ID=cds-WP_012105043.1;Parent=gene-AD853_RS05500;Dbxref=GenBank:WP_012105043.1;Name=WP_012105043.1;Ontology_term=GO:0003924,GO:0005525,GO:0019003;gbkey=CDS;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,GDP binding|0019003||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004717556.1;locus_tag=AD853_RS05500;product=YcjX family GTP-binding protein;protein_id=WP_012105043.1;transl_table=11 NZ_CPUY01000004.1 RefSeq gene 138039 138281 . - . ID=gene-AD853_RS05505;Name=pspD;gbkey=Gene;gene=pspD;gene_biotype=protein_coding;locus_tag=AD853_RS05505;old_locus_tag=ERS008462_01114 NZ_CPUY01000004.1 Protein Homology CDS 138039 138281 . - 0 ID=cds-WP_002216375.1;Parent=gene-AD853_RS05505;Dbxref=GenBank:WP_002216375.1;Name=WP_002216375.1;Ontology_term=GO:0006950;gbkey=CDS;gene=pspD;go_process=response to stress|0006950||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002216375.1;locus_tag=AD853_RS05505;product=phage shock protein PspD;protein_id=WP_002216375.1;transl_table=11 NZ_CPUY01000004.1 RefSeq gene 138366 138725 . - . ID=gene-AD853_RS05510;Name=pspC;gbkey=Gene;gene=pspC;gene_biotype=protein_coding;locus_tag=AD853_RS05510;old_locus_tag=ERS008462_01115 NZ_CPUY01000004.1 Protein Homology CDS 138366 138725 . - 0 ID=cds-WP_002210977.1;Parent=gene-AD853_RS05510;Dbxref=GenBank:WP_002210977.1;Name=WP_002210977.1;gbkey=CDS;gene=pspC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210977.1;locus_tag=AD853_RS05510;product=envelope stress response membrane protein PspC;protein_id=WP_002210977.1;transl_table=11 NZ_CPUY01000004.1 RefSeq gene 138725 138952 . - . ID=gene-AD853_RS05515;Name=pspB;gbkey=Gene;gene=pspB;gene_biotype=protein_coding;locus_tag=AD853_RS05515;old_locus_tag=ERS008462_01116 NZ_CPUY01000004.1 Protein Homology CDS 138725 138952 . - 0 ID=cds-WP_002210976.1;Parent=gene-AD853_RS05515;Dbxref=GenBank:WP_002210976.1;Name=WP_002210976.1;Ontology_term=GO:0009271;gbkey=CDS;gene=pspB;go_process=phage shock|0009271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005161022.1;locus_tag=AD853_RS05515;product=envelope stress response membrane protein PspB;protein_id=WP_002210976.1;transl_table=11 NZ_CPUY01000004.1 RefSeq gene 139114 139779 . - . ID=gene-AD853_RS05520;Name=pspA;gbkey=Gene;gene=pspA;gene_biotype=protein_coding;locus_tag=AD853_RS05520;old_locus_tag=ERS008462_01117 NZ_CPUY01000004.1 Protein Homology CDS 139114 139779 . - 0 ID=cds-WP_038823929.1;Parent=gene-AD853_RS05520;Dbxref=GenBank:WP_038823929.1;Name=WP_038823929.1;gbkey=CDS;gene=pspA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192521.1;locus_tag=AD853_RS05520;product=phage shock protein PspA;protein_id=WP_038823929.1;transl_table=11 NZ_CPUY01000004.1 RefSeq gene 140024 141052 . + . ID=gene-AD853_RS05525;Name=pspF;gbkey=Gene;gene=pspF;gene_biotype=protein_coding;locus_tag=AD853_RS05525;old_locus_tag=ERS008462_01118 NZ_CPUY01000004.1 Protein Homology CDS 140024 141052 . + 0 ID=cds-WP_002210974.1;Parent=gene-AD853_RS05525;Dbxref=GenBank:WP_002210974.1;Name=WP_002210974.1;gbkey=CDS;gene=pspF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210974.1;locus_tag=AD853_RS05525;product=phage shock protein operon transcriptional activator;protein_id=WP_002210974.1;transl_table=11 NZ_CPUY01000004.1 RefSeq gene 141603 143246 . + . ID=gene-AD853_RS05535;Name=sapA;gbkey=Gene;gene=sapA;gene_biotype=protein_coding;locus_tag=AD853_RS05535;old_locus_tag=ERS008462_01120 NZ_CPUY01000004.1 Protein Homology CDS 141603 143246 . + 0 ID=cds-WP_038823930.1;Parent=gene-AD853_RS05535;Dbxref=GenBank:WP_038823930.1;Name=WP_038823930.1;Ontology_term=GO:0055085,GO:0043190;gbkey=CDS;gene=sapA;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012229746.1;locus_tag=AD853_RS05535;product=ABC transporter substrate-binding protein SapA;protein_id=WP_038823930.1;transl_table=11 NZ_CPUY01000004.1 RefSeq gene 143243 144208 . + . ID=gene-AD853_RS05540;Name=sapB;gbkey=Gene;gene=sapB;gene_biotype=protein_coding;locus_tag=AD853_RS05540;old_locus_tag=ERS008462_01121 NZ_CPUY01000004.1 Protein Homology CDS 143243 144208 . + 0 ID=cds-WP_002210972.1;Parent=gene-AD853_RS05540;Dbxref=GenBank:WP_002210972.1;Name=WP_002210972.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=sapB;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309897.1;locus_tag=AD853_RS05540;product=putrescine export ABC transporter permease SapB;protein_id=WP_002210972.1;transl_table=11 NZ_CPUY01000004.1 RefSeq gene 144195 145085 . + . ID=gene-AD853_RS05545;Name=sapC;gbkey=Gene;gene=sapC;gene_biotype=protein_coding;locus_tag=AD853_RS05545;old_locus_tag=ERS008462_01122 NZ_CPUY01000004.1 Protein Homology CDS 144195 145085 . + 0 ID=cds-WP_002210971.1;Parent=gene-AD853_RS05545;Dbxref=GenBank:WP_002210971.1;Name=WP_002210971.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=sapC;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019079344.1;locus_tag=AD853_RS05545;product=putrescine export ABC transporter permease SapC;protein_id=WP_002210971.1;transl_table=11 NZ_CPUY01000004.1 RefSeq gene 145085 146077 . + . ID=gene-AD853_RS05550;Name=sapD;gbkey=Gene;gene=sapD;gene_biotype=protein_coding;locus_tag=AD853_RS05550;old_locus_tag=ERS008462_01123 NZ_CPUY01000004.1 Protein Homology CDS 145085 146077 . + 0 ID=cds-WP_002210970.1;Parent=gene-AD853_RS05550;Dbxref=GenBank:WP_002210970.1;Name=WP_002210970.1;gbkey=CDS;gene=sapD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011146812.1;locus_tag=AD853_RS05550;product=putrescine export ABC transporter ATP-binding protein SapD;protein_id=WP_002210970.1;transl_table=11 NZ_CPUY01000004.1 RefSeq gene 146077 146892 . + . ID=gene-AD853_RS05555;Name=sapF;gbkey=Gene;gene=sapF;gene_biotype=protein_coding;locus_tag=AD853_RS05555;old_locus_tag=ERS008462_01124 NZ_CPUY01000004.1 Protein Homology CDS 146077 146892 . + 0 ID=cds-WP_002210969.1;Parent=gene-AD853_RS05555;Dbxref=GenBank:WP_002210969.1;Name=WP_002210969.1;gbkey=CDS;gene=sapF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210969.1;locus_tag=AD853_RS05555;product=putrescine export ABC transporter ATP-binding protein SapF;protein_id=WP_002210969.1;transl_table=11 NZ_CPUY01000004.1 RefSeq gene 147283 148545 . + . ID=gene-AD853_RS05560;Name=AD853_RS05560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS05560;old_locus_tag=ERS008462_01125 NZ_CPUY01000004.1 Protein Homology CDS 147283 148545 . + 0 ID=cds-WP_038823931.1;Parent=gene-AD853_RS05560;Dbxref=GenBank:WP_038823931.1;Name=WP_038823931.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105042.1;locus_tag=AD853_RS05560;product=CMD domain-containing protein;protein_id=WP_038823931.1;transl_table=11 NZ_CPUY01000004.1 RefSeq gene 149189 150694 . + . ID=gene-AD853_RS05565;Name=dtpA;gbkey=Gene;gene=dtpA;gene_biotype=protein_coding;locus_tag=AD853_RS05565;old_locus_tag=ERS008462_01127 NZ_CPUY01000004.1 Protein Homology CDS 149189 150694 . + 0 ID=cds-WP_038825626.1;Parent=gene-AD853_RS05565;Dbxref=GenBank:WP_038825626.1;Name=WP_038825626.1;Ontology_term=GO:0015833,GO:0055085,GO:1904680,GO:0016020;gbkey=CDS;gene=dtpA;go_component=membrane|0016020||IEA;go_function=peptide transmembrane transporter activity|1904680||IEA;go_process=peptide transport|0015833||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002215910.1;locus_tag=AD853_RS05565;product=dipeptide/tripeptide permease DtpA;protein_id=WP_038825626.1;transl_table=11 NZ_CPUY01000004.1 RefSeq gene 150949 151539 . + . ID=gene-AD853_RS05570;Name=AD853_RS05570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS05570;old_locus_tag=ERS008462_01128 NZ_CPUY01000004.1 Protein Homology CDS 150949 151539 . + 0 ID=cds-WP_002210965.1;Parent=gene-AD853_RS05570;Dbxref=GenBank:WP_002210965.1;Name=WP_002210965.1;Ontology_term=GO:0016192,GO:0031267;gbkey=CDS;go_function=small GTPase binding|0031267||IEA;go_process=vesicle-mediated transport|0016192||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005184456.1;locus_tag=AD853_RS05570;product=Yip1 family protein;protein_id=WP_002210965.1;transl_table=11 NZ_CPUY01000004.1 RefSeq gene 151785 152048 . + . ID=gene-AD853_RS05575;Name=AD853_RS05575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS05575;old_locus_tag=ERS008462_01129 NZ_CPUY01000004.1 Protein Homology CDS 151785 152048 . + 0 ID=cds-WP_002210964.1;Parent=gene-AD853_RS05575;Dbxref=GenBank:WP_002210964.1;Name=WP_002210964.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004874270.1;locus_tag=AD853_RS05575;product=YjbD family protein;protein_id=WP_002210964.1;transl_table=11 NZ_CPUY01000004.1 RefSeq gene 152281 152886 . + . ID=gene-AD853_RS05580;Name=gstA;gbkey=Gene;gene=gstA;gene_biotype=protein_coding;locus_tag=AD853_RS05580;old_locus_tag=ERS008462_01130 NZ_CPUY01000004.1 Protein Homology CDS 152281 152886 . + 0 ID=cds-WP_002210962.1;Parent=gene-AD853_RS05580;Dbxref=GenBank:WP_002210962.1;Name=WP_002210962.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;gene=gstA;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210962.1;locus_tag=AD853_RS05580;product=glutathione transferase GstA;protein_id=WP_002210962.1;transl_table=11 NZ_CPUY01000004.1 RefSeq gene 152946 153806 . - . ID=gene-AD853_RS05585;Name=pdxY;gbkey=Gene;gene=pdxY;gene_biotype=protein_coding;locus_tag=AD853_RS05585;old_locus_tag=ERS008462_01131 NZ_CPUY01000004.1 Protein Homology CDS 152946 153806 . - 0 ID=cds-WP_011192523.1;Parent=gene-AD853_RS05585;Dbxref=GenBank:WP_011192523.1;Name=WP_011192523.1;Ontology_term=GO:0009443,GO:0008478;gbkey=CDS;gene=pdxY;go_function=pyridoxal kinase activity|0008478||IEA;go_process=pyridoxal 5'-phosphate salvage|0009443||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210961.1;locus_tag=AD853_RS05585;product=pyridoxal kinase PdxY;protein_id=WP_011192523.1;transl_table=11 NZ_CPUY01000004.1 RefSeq gene 153961 155235 . - . ID=gene-AD853_RS05590;Name=tyrS;gbkey=Gene;gene=tyrS;gene_biotype=protein_coding;locus_tag=AD853_RS05590;old_locus_tag=ERS008462_01132 NZ_CPUY01000004.1 Protein Homology CDS 153961 155235 . - 0 ID=cds-WP_011192524.1;Parent=gene-AD853_RS05590;Dbxref=GenBank:WP_011192524.1;Name=WP_011192524.1;Ontology_term=GO:0006437,GO:0000166,GO:0004831,GO:0005524;gbkey=CDS;gene=tyrS;go_function=nucleotide binding|0000166||IEA,tyrosine-tRNA ligase activity|0004831||IEA,ATP binding|0005524||IEA;go_process=tyrosyl-tRNA aminoacylation|0006437||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210960.1;locus_tag=AD853_RS05590;product=tyrosine--tRNA ligase;protein_id=WP_011192524.1;transl_table=11 NZ_CPUY01000004.1 RefSeq gene 155417 156070 . - . ID=gene-AD853_RS05595;Name=pdxH;gbkey=Gene;gene=pdxH;gene_biotype=protein_coding;locus_tag=AD853_RS05595;old_locus_tag=ERS008462_01133 NZ_CPUY01000004.1 Protein Homology CDS 155417 156070 . - 0 ID=cds-WP_002210959.1;Parent=gene-AD853_RS05595;Dbxref=GenBank:WP_002210959.1;Name=WP_002210959.1;Ontology_term=GO:0008615,GO:0004733,GO:0010181;gbkey=CDS;gene=pdxH;go_function=pyridoxamine phosphate oxidase activity|0004733||IEA,FMN binding|0010181||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105041.1;locus_tag=AD853_RS05595;product=pyridoxamine 5'-phosphate oxidase;protein_id=WP_002210959.1;transl_table=11 NZ_CPUY01000004.1 RefSeq gene 156161 156475 . - . ID=gene-AD853_RS05600;Name=AD853_RS05600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS05600;old_locus_tag=ERS008462_01134 NZ_CPUY01000004.1 Protein Homology CDS 156161 156475 . - 0 ID=cds-WP_002218323.1;Parent=gene-AD853_RS05600;Dbxref=GenBank:WP_002218323.1;Name=WP_002218323.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002218323.1;locus_tag=AD853_RS05600;product=MliC family protein;protein_id=WP_002218323.1;transl_table=11 NZ_CPUY01000004.1 RefSeq gene 156533 157645 . - . ID=gene-AD853_RS05605;Name=anmK;gbkey=Gene;gene=anmK;gene_biotype=protein_coding;locus_tag=AD853_RS05605;old_locus_tag=ERS008462_01135 NZ_CPUY01000004.1 Protein Homology CDS 156533 157645 . - 0 ID=cds-WP_002218322.1;Parent=gene-AD853_RS05605;Dbxref=GenBank:WP_002218322.1;Name=WP_002218322.1;gbkey=CDS;gene=anmK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002218322.1;locus_tag=AD853_RS05605;product=anhydro-N-acetylmuramic acid kinase;protein_id=WP_002218322.1;transl_table=11 NZ_CPUY01000004.1 RefSeq gene 158201 158668 . + . ID=gene-AD853_RS05610;Name=AD853_RS05610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS05610;old_locus_tag=ERS008462_01136 NZ_CPUY01000004.1 Protein Homology CDS 158201 158668 . + 0 ID=cds-WP_012105040.1;Parent=gene-AD853_RS05610;Dbxref=GenBank:WP_012105040.1;Name=WP_012105040.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005165921.1;locus_tag=AD853_RS05610;product=outer membrane lipoprotein;protein_id=WP_012105040.1;transl_table=11 NZ_CPUY01000004.1 RefSeq gene 158812 159243 . - . ID=gene-AD853_RS05615;Name=rovA;gbkey=Gene;gene=rovA;gene_biotype=protein_coding;locus_tag=AD853_RS05615;old_locus_tag=ERS008462_01137 NZ_CPUY01000004.1 Protein Homology CDS 158812 159243 . - 0 ID=cds-WP_002210955.1;Parent=gene-AD853_RS05615;Dbxref=GenBank:WP_002210955.1;Name=WP_002210955.1;Note=RovA (regulator of virulence A) is a MarR family transcriptional regulator.;gbkey=CDS;gene=rovA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210955.1;locus_tag=AD853_RS05615;product=virulence master transcriptional regulator RovA;protein_id=WP_002210955.1;transl_table=11 NZ_CPUY01000004.1 RefSeq gene 160042 160938 . - . ID=gene-AD853_RS05620;Name=AD853_RS05620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS05620;old_locus_tag=ERS008462_01138 NZ_CPUY01000004.1 Protein Homology CDS 160042 160938 . - 0 ID=cds-WP_038823773.1;Parent=gene-AD853_RS05620;Dbxref=GenBank:WP_038823773.1;Name=WP_038823773.1;Ontology_term=GO:0016491,GO:0050661;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019083060.1;locus_tag=AD853_RS05620;product=aldo/keto reductase;protein_id=WP_038823773.1;transl_table=11 NZ_CPUY01000004.1 RefSeq gene 161070 161309 . - . ID=gene-AD853_RS05625;Name=AD853_RS05625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS05625;old_locus_tag=ERS008462_01139 NZ_CPUY01000004.1 Protein Homology CDS 161070 161309 . - 0 ID=cds-WP_002210953.1;Parent=gene-AD853_RS05625;Dbxref=GenBank:WP_002210953.1;Name=WP_002210953.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005169466.1;locus_tag=AD853_RS05625;product=DUF1289 domain-containing protein;protein_id=WP_002210953.1;transl_table=11 NZ_CPUY01000004.1 RefSeq gene 161483 163120 . + . ID=gene-AD853_RS05630;Name=eptA;gbkey=Gene;gene=eptA;gene_biotype=protein_coding;locus_tag=AD853_RS05630;old_locus_tag=ERS008462_01140 NZ_CPUY01000004.1 Protein Homology CDS 161483 163120 . + 0 ID=cds-WP_002210952.1;Parent=gene-AD853_RS05630;Dbxref=GenBank:WP_002210952.1;Name=WP_002210952.1;Ontology_term=GO:0016772;gbkey=CDS;gene=eptA;go_function=transferase activity%2C transferring phosphorus-containing groups|0016772||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105038.1;locus_tag=AD853_RS05630;product=phosphoethanolamine transferase EptA;protein_id=WP_002210952.1;transl_table=11 NZ_CPUY01000004.1 RefSeq gene 163383 163982 . + . ID=gene-AD853_RS05635;Name=AD853_RS05635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS05635;old_locus_tag=ERS008462_01141 NZ_CPUY01000004.1 Protein Homology CDS 163383 163982 . + 0 ID=cds-WP_002210951.1;Parent=gene-AD853_RS05635;Dbxref=GenBank:WP_002210951.1;Name=WP_002210951.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210951.1;locus_tag=AD853_RS05635;product=TetR/AcrR family transcriptional regulator;protein_id=WP_002210951.1;transl_table=11 NZ_CPUY01000004.1 RefSeq gene 164070 165167 . + . ID=gene-AD853_RS05640;Name=nemA;gbkey=Gene;gene=nemA;gene_biotype=protein_coding;locus_tag=AD853_RS05640;old_locus_tag=ERS008462_01142 NZ_CPUY01000004.1 Protein Homology CDS 164070 165167 . + 0 ID=cds-WP_050124573.1;Parent=gene-AD853_RS05640;Dbxref=GenBank:WP_050124573.1;Name=WP_050124573.1;gbkey=CDS;gene=nemA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004700229.1;locus_tag=AD853_RS05640;product=alkene reductase;protein_id=WP_050124573.1;transl_table=11 NZ_CPUY01000004.1 RefSeq pseudogene 165388 168344 . - . ID=gene-AD853_RS05645;Name=AD853_RS05645;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD853_RS05645;pseudo=true NZ_CPUY01000004.1 Protein Homology CDS 165388 168344 . - 0 ID=cds-AD853_RS05645;Parent=gene-AD853_RS05645;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210949.1;locus_tag=AD853_RS05645;product=RHS repeat-associated core domain-containing protein;pseudo=true;transl_table=11 NZ_CPUY01000004.1 RefSeq gene 168617 169024 . + . ID=gene-AD853_RS05650;Name=gloA;gbkey=Gene;gene=gloA;gene_biotype=protein_coding;locus_tag=AD853_RS05650;old_locus_tag=ERS008462_01145 NZ_CPUY01000004.1 Protein Homology CDS 168617 169024 . + 0 ID=cds-WP_011192527.1;Parent=gene-AD853_RS05650;Dbxref=GenBank:WP_011192527.1;Name=WP_011192527.1;gbkey=CDS;gene=gloA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210948.1;locus_tag=AD853_RS05650;product=lactoylglutathione lyase;protein_id=WP_011192527.1;transl_table=11 NZ_CPUY01000004.1 RefSeq gene 169136 169783 . + . ID=gene-AD853_RS05655;Name=rnt;gbkey=Gene;gene=rnt;gene_biotype=protein_coding;locus_tag=AD853_RS05655;old_locus_tag=ERS008462_01146 NZ_CPUY01000004.1 Protein Homology CDS 169136 169783 . + 0 ID=cds-WP_012105036.1;Parent=gene-AD853_RS05655;Dbxref=GenBank:WP_012105036.1;Name=WP_012105036.1;Ontology_term=GO:0006364,GO:0042780,GO:0016896;gbkey=CDS;gene=rnt;go_function=RNA exonuclease activity%2C producing 5'-phosphomonoesters|0016896||IEA;go_process=rRNA processing|0006364||IEA,tRNA 3'-end processing|0042780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005166685.1;locus_tag=AD853_RS05655;product=ribonuclease T;protein_id=WP_012105036.1;transl_table=11 NZ_CPUY01000004.1 RefSeq gene 169907 170257 . - . ID=gene-AD853_RS05660;Name=AD853_RS05660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS05660;old_locus_tag=ERS008462_01147 NZ_CPUY01000004.1 Protein Homology CDS 169907 170257 . - 0 ID=cds-WP_002210946.1;Parent=gene-AD853_RS05660;Dbxref=GenBank:WP_002210946.1;Name=WP_002210946.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005184480.1;locus_tag=AD853_RS05660;product=Grx4 family monothiol glutaredoxin;protein_id=WP_002210946.1;transl_table=11 NZ_CPUY01000004.1 RefSeq gene 170697 171548 . + . ID=gene-AD853_RS05670;Name=AD853_RS05670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS05670;old_locus_tag=ERS008462_01149 NZ_CPUY01000004.1 Protein Homology CDS 170697 171548 . + 0 ID=cds-WP_038823732.1;Parent=gene-AD853_RS05670;Dbxref=GenBank:WP_038823732.1;Name=WP_038823732.1;Ontology_term=GO:0000270,GO:0006508,GO:0008233,GO:0008234,GO:0016787;gbkey=CDS;go_function=peptidase activity|0008233||IEA,cysteine-type peptidase activity|0008234||IEA,hydrolase activity|0016787||IEA;go_process=peptidoglycan metabolic process|0000270||IEA,proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011906186.1;locus_tag=AD853_RS05670;product=C40 family peptidase;protein_id=WP_038823732.1;transl_table=11 NZ_CPUY01000004.1 RefSeq gene 171909 172487 . + . ID=gene-AD853_RS05675;Name=sodB;gbkey=Gene;gene=sodB;gene_biotype=protein_coding;locus_tag=AD853_RS05675;old_locus_tag=ERS008462_01150 NZ_CPUY01000004.1 Protein Homology CDS 171909 172487 . + 0 ID=cds-WP_012304026.1;Parent=gene-AD853_RS05675;Dbxref=GenBank:WP_012304026.1;Name=WP_012304026.1;Ontology_term=GO:0006801,GO:0004784,GO:0046872;gbkey=CDS;gene=sodB;go_function=superoxide dismutase activity|0004784||IEA,metal ion binding|0046872||IEA;go_process=superoxide metabolic process|0006801||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210944.1;locus_tag=AD853_RS05675;product=superoxide dismutase [Fe];protein_id=WP_012304026.1;transl_table=11 NZ_CPUY01000004.1 RefSeq gene 172591 172680 . - . ID=gene-AD853_RS21495;Name=cydH;gbkey=Gene;gene=cydH;gene_biotype=protein_coding;gene_synonym=ynhF;locus_tag=AD853_RS21495 NZ_CPUY01000004.1 Protein Homology CDS 172591 172680 . - 0 ID=cds-WP_002216285.1;Parent=gene-AD853_RS21495;Dbxref=GenBank:WP_002216285.1;Name=WP_002216285.1;gbkey=CDS;gene=cydH;inference=COORDINATES: protein motif:HMM:NF033411.1;locus_tag=AD853_RS21495;product=cytochrome bd-I oxidase subunit CydH;protein_id=WP_002216285.1;transl_table=11 NZ_CPUY01000004.1 RefSeq gene 173014 174039 . + . ID=gene-AD853_RS05680;Name=purR;gbkey=Gene;gene=purR;gene_biotype=protein_coding;locus_tag=AD853_RS05680;old_locus_tag=ERS008462_01152 NZ_CPUY01000004.1 Protein Homology CDS 173014 174039 . + 0 ID=cds-WP_002210943.1;Parent=gene-AD853_RS05680;Dbxref=GenBank:WP_002210943.1;Name=WP_002210943.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=purR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005127190.1;locus_tag=AD853_RS05680;product=HTH-type transcriptional repressor PurR;protein_id=WP_002210943.1;transl_table=11 NZ_CPUY01000004.1 RefSeq gene 174111 175046 . - . ID=gene-AD853_RS05685;Name=punR;gbkey=Gene;gene=punR;gene_biotype=protein_coding;locus_tag=AD853_RS05685;old_locus_tag=ERS008462_01154 NZ_CPUY01000004.1 Protein Homology CDS 174111 175046 . - 0 ID=cds-WP_016599971.1;Parent=gene-AD853_RS05685;Dbxref=GenBank:WP_016599971.1;Name=WP_016599971.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=punR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192531.1;locus_tag=AD853_RS05685;product=DNA-binding transcriptional activator PunR;protein_id=WP_016599971.1;transl_table=11 NZ_CPUY01000004.1 RefSeq gene 175321 176523 . + . ID=gene-AD853_RS05690;Name=punC;gbkey=Gene;gene=punC;gene_biotype=protein_coding;gene_synonym=ydhC;locus_tag=AD853_RS05690;old_locus_tag=ERS008462_01155 NZ_CPUY01000004.1 Protein Homology CDS 175321 176523 . + 0 ID=cds-WP_024062903.1;Parent=gene-AD853_RS05690;Dbxref=GenBank:WP_024062903.1;Name=WP_024062903.1;Ontology_term=GO:1990961,GO:0042910,GO:0016020;gbkey=CDS;gene=punC;go_component=membrane|0016020||IEA;go_function=xenobiotic transmembrane transporter activity|0042910||IEA;go_process=xenobiotic detoxification by transmembrane export across the plasma membrane|1990961||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210941.1;locus_tag=AD853_RS05690;product=purine nucleoside transporter PunC;protein_id=WP_024062903.1;transl_table=11 NZ_CPUY01000004.1 RefSeq gene 177003 178154 . + . ID=gene-AD853_RS05695;Name=cfa;gbkey=Gene;gene=cfa;gene_biotype=protein_coding;locus_tag=AD853_RS05695;old_locus_tag=ERS008462_01156 NZ_CPUY01000004.1 Protein Homology CDS 177003 178154 . + 0 ID=cds-WP_002210940.1;Parent=gene-AD853_RS05695;Dbxref=GenBank:WP_002210940.1;Name=WP_002210940.1;gbkey=CDS;gene=cfa;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002230931.1;locus_tag=AD853_RS05695;product=cyclopropane fatty acyl phospholipid synthase;protein_id=WP_002210940.1;transl_table=11 NZ_CPUY01000004.1 RefSeq gene 178205 178861 . - . ID=gene-AD853_RS05700;Name=AD853_RS05700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS05700;old_locus_tag=ERS008462_01157 NZ_CPUY01000004.1 Protein Homology CDS 178205 178861 . - 0 ID=cds-WP_012304024.1;Parent=gene-AD853_RS05700;Dbxref=GenBank:WP_012304024.1;Name=WP_012304024.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210939.1;locus_tag=AD853_RS05700;product=riboflavin synthase;protein_id=WP_012304024.1;transl_table=11 NZ_CPUY01000004.1 RefSeq gene 178906 179097 . + . ID=gene-AD853_RS22455;Name=AD853_RS22455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS22455 NZ_CPUY01000004.1 Protein Homology CDS 178906 179097 . + 0 ID=cds-WP_071990115.1;Parent=gene-AD853_RS22455;Dbxref=GenBank:WP_071990115.1;Name=WP_071990115.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210938.1;locus_tag=AD853_RS22455;product=hypothetical protein;protein_id=WP_071990115.1;transl_table=11 NZ_CPUY01000004.1 RefSeq gene 179122 180483 . + . ID=gene-AD853_RS05705;Name=AD853_RS05705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS05705;old_locus_tag=ERS008462_01158 NZ_CPUY01000004.1 Protein Homology CDS 179122 180483 . + 0 ID=cds-WP_038823730.1;Parent=gene-AD853_RS05705;Dbxref=GenBank:WP_038823730.1;Name=WP_038823730.1;Ontology_term=GO:0006855,GO:0042910,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=xenobiotic transmembrane transporter activity|0042910||IEA;go_process=xenobiotic transmembrane transport|0006855||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105030.1;locus_tag=AD853_RS05705;product=MATE family efflux transporter;protein_id=WP_038823730.1;transl_table=11 NZ_CPUY01000004.1 RefSeq gene 180726 180802 . + . ID=gene-AD853_RS05710;Name=AD853_RS05710;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD853_RS05710;old_locus_tag=ERS008462_01159 NZ_CPUY01000004.1 tRNAscan-SE tRNA 180726 180802 . + . ID=rna-AD853_RS05710;Parent=gene-AD853_RS05710;anticodon=(pos:180760..180762);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD853_RS05710;product=tRNA-Val NZ_CPUY01000004.1 tRNAscan-SE exon 180726 180802 . + . ID=exon-AD853_RS05710-1;Parent=rna-AD853_RS05710;anticodon=(pos:180760..180762);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD853_RS05710;product=tRNA-Val NZ_CPUY01000004.1 RefSeq gene 180862 180938 . + . ID=gene-AD853_RS05715;Name=AD853_RS05715;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD853_RS05715;old_locus_tag=ERS008462_01160 NZ_CPUY01000004.1 tRNAscan-SE tRNA 180862 180938 . + . ID=rna-AD853_RS05715;Parent=gene-AD853_RS05715;anticodon=(pos:180896..180898);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD853_RS05715;product=tRNA-Val NZ_CPUY01000004.1 tRNAscan-SE exon 180862 180938 . + . ID=exon-AD853_RS05715-1;Parent=rna-AD853_RS05715;anticodon=(pos:180896..180898);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD853_RS05715;product=tRNA-Val NZ_CPUY01000004.1 RefSeq gene 181108 181184 . + . ID=gene-AD853_RS05720;Name=AD853_RS05720;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD853_RS05720;old_locus_tag=ERS008462_01162 NZ_CPUY01000004.1 tRNAscan-SE tRNA 181108 181184 . + . ID=rna-AD853_RS05720;Parent=gene-AD853_RS05720;anticodon=(pos:181142..181144);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD853_RS05720;product=tRNA-Val NZ_CPUY01000004.1 tRNAscan-SE exon 181108 181184 . + . ID=exon-AD853_RS05720-1;Parent=rna-AD853_RS05720;anticodon=(pos:181142..181144);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD853_RS05720;product=tRNA-Val NZ_CPUY01000004.1 RefSeq gene 181759 183171 . + . ID=gene-AD853_RS05725;Name=pykF;gbkey=Gene;gene=pykF;gene_biotype=protein_coding;locus_tag=AD853_RS05725;old_locus_tag=ERS008462_01163 NZ_CPUY01000004.1 Protein Homology CDS 181759 183171 . + 0 ID=cds-WP_002210936.1;Parent=gene-AD853_RS05725;Dbxref=GenBank:WP_002210936.1;Name=WP_002210936.1;Ontology_term=GO:0006096,GO:0004743;gbkey=CDS;gene=pykF;go_function=pyruvate kinase activity|0004743||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010346010.1;locus_tag=AD853_RS05725;product=pyruvate kinase PykF;protein_id=WP_002210936.1;transl_table=11 NZ_CPUY01000004.1 RefSeq gene 183492 183728 . + . ID=gene-AD853_RS05730;Name=AD853_RS05730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS05730;old_locus_tag=ERS008462_01164 NZ_CPUY01000004.1 Protein Homology CDS 183492 183728 . + 0 ID=cds-WP_002227902.1;Parent=gene-AD853_RS05730;Dbxref=GenBank:WP_002227902.1;Name=WP_002227902.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004157411.1;locus_tag=AD853_RS05730;product=major outer membrane lipoprotein;protein_id=WP_002227902.1;transl_table=11 NZ_CPUY01000004.1 RefSeq gene 184088 185152 . - . ID=gene-AD853_RS05735;Name=AD853_RS05735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS05735;old_locus_tag=ERS008462_01165 NZ_CPUY01000004.1 Protein Homology CDS 184088 185152 . - 0 ID=cds-WP_002223648.1;Parent=gene-AD853_RS05735;Dbxref=GenBank:WP_002223648.1;Name=WP_002223648.1;Ontology_term=GO:0016740;gbkey=CDS;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004706590.1;locus_tag=AD853_RS05735;product=L%2CD-transpeptidase family protein;protein_id=WP_002223648.1;transl_table=11 NZ_CPUY01000004.1 RefSeq gene 185423 185845 . - . ID=gene-AD853_RS05740;Name=sufE;gbkey=Gene;gene=sufE;gene_biotype=protein_coding;locus_tag=AD853_RS05740;old_locus_tag=ERS008462_01166 NZ_CPUY01000004.1 Protein Homology CDS 185423 185845 . - 0 ID=cds-WP_002211804.1;Parent=gene-AD853_RS05740;Dbxref=GenBank:WP_002211804.1;Name=WP_002211804.1;gbkey=CDS;gene=sufE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211804.1;locus_tag=AD853_RS05740;product=cysteine desulfuration protein SufE;protein_id=WP_002211804.1;transl_table=11 NZ_CPUY01000004.1 RefSeq gene 185934 187154 . - . ID=gene-AD853_RS05745;Name=sufS;gbkey=Gene;gene=sufS;gene_biotype=protein_coding;locus_tag=AD853_RS05745;old_locus_tag=ERS008462_01167 NZ_CPUY01000004.1 Protein Homology CDS 185934 187154 . - 0 ID=cds-WP_038825317.1;Parent=gene-AD853_RS05745;Dbxref=GenBank:WP_038825317.1;Name=WP_038825317.1;Ontology_term=GO:0006534,GO:0030170,GO:0031071;gbkey=CDS;gene=sufS;go_function=pyridoxal phosphate binding|0030170||IEA,cysteine desulfurase activity|0031071||IEA;go_process=cysteine metabolic process|0006534||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012229769.1;locus_tag=AD853_RS05745;product=cysteine desulfurase SufS;protein_id=WP_038825317.1;transl_table=11 NZ_CPUY01000004.1 RefSeq gene 187151 188476 . - . ID=gene-AD853_RS05750;Name=sufD;gbkey=Gene;gene=sufD;gene_biotype=protein_coding;locus_tag=AD853_RS05750;old_locus_tag=ERS008462_01168 NZ_CPUY01000004.1 Protein Homology CDS 187151 188476 . - 0 ID=cds-WP_050124574.1;Parent=gene-AD853_RS05750;Dbxref=GenBank:WP_050124574.1;Name=WP_050124574.1;Ontology_term=GO:0016226;gbkey=CDS;gene=sufD;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211806.1;locus_tag=AD853_RS05750;product=Fe-S cluster assembly protein SufD;protein_id=WP_050124574.1;transl_table=11 NZ_CPUY01000004.1 RefSeq gene 188451 189197 . - . ID=gene-AD853_RS05755;Name=sufC;gbkey=Gene;gene=sufC;gene_biotype=protein_coding;locus_tag=AD853_RS05755;old_locus_tag=ERS008462_01169 NZ_CPUY01000004.1 Protein Homology CDS 188451 189197 . - 0 ID=cds-WP_011192535.1;Parent=gene-AD853_RS05755;Dbxref=GenBank:WP_011192535.1;Name=WP_011192535.1;Ontology_term=GO:0005524;gbkey=CDS;gene=sufC;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009112393.1;locus_tag=AD853_RS05755;product=Fe-S cluster assembly ATPase SufC;protein_id=WP_011192535.1;transl_table=11 NZ_CPUY01000004.1 RefSeq gene 189382 190893 . - . ID=gene-AD853_RS05760;Name=sufB;gbkey=Gene;gene=sufB;gene_biotype=protein_coding;locus_tag=AD853_RS05760;old_locus_tag=ERS008462_01170 NZ_CPUY01000004.1 Protein Homology CDS 189382 190893 . - 0 ID=cds-WP_011192536.1;Parent=gene-AD853_RS05760;Dbxref=GenBank:WP_011192536.1;Name=WP_011192536.1;Ontology_term=GO:0016226;gbkey=CDS;gene=sufB;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192536.1;locus_tag=AD853_RS05760;product=Fe-S cluster assembly protein SufB;protein_id=WP_011192536.1;transl_table=11 NZ_CPUY01000004.1 RefSeq gene 190908 191279 . - . ID=gene-AD853_RS05765;Name=sufA;gbkey=Gene;gene=sufA;gene_biotype=protein_coding;locus_tag=AD853_RS05765;old_locus_tag=ERS008462_01171 NZ_CPUY01000004.1 Protein Homology CDS 190908 191279 . - 0 ID=cds-WP_012304022.1;Parent=gene-AD853_RS05765;Dbxref=GenBank:WP_012304022.1;Name=WP_012304022.1;gbkey=CDS;gene=sufA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304022.1;locus_tag=AD853_RS05765;product=Fe-S cluster assembly scaffold SufA;protein_id=WP_012304022.1;transl_table=11 NZ_CPUY01000004.1 RefSeq gene 191874 192290 . - . ID=gene-AD853_RS05775;Name=AD853_RS05775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS05775;old_locus_tag=ERS008462_01172 NZ_CPUY01000004.1 Protein Homology CDS 191874 192290 . - 0 ID=cds-WP_002211810.1;Parent=gene-AD853_RS05775;Dbxref=GenBank:WP_002211810.1;Name=WP_002211810.1;Ontology_term=GO:0016790;gbkey=CDS;go_function=thiolester hydrolase activity|0016790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005270288.1;locus_tag=AD853_RS05775;product=hotdog fold thioesterase;protein_id=WP_002211810.1;transl_table=11 NZ_CPUY01000004.1 RefSeq gene 192412 195468 . - . ID=gene-AD853_RS05780;Name=ydiJ;gbkey=Gene;gene=ydiJ;gene_biotype=protein_coding;locus_tag=AD853_RS05780;old_locus_tag=ERS008462_01173 NZ_CPUY01000004.1 Protein Homology CDS 192412 195468 . - 0 ID=cds-WP_038825531.1;Parent=gene-AD853_RS05780;Dbxref=GenBank:WP_038825531.1;Name=WP_038825531.1;Ontology_term=GO:1903457,GO:0008720,GO:0046872;gbkey=CDS;gene=ydiJ;go_function=D-lactate dehydrogenase (NAD+) activity|0008720||IEA,metal ion binding|0046872||IEA;go_process=lactate catabolic process|1903457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005169419.1;locus_tag=AD853_RS05780;product=D-2-hydroxyglutarate dehydrogenase YdiJ;protein_id=WP_038825531.1;transl_table=11 NZ_CPUY01000004.1 RefSeq gene 196089 197192 . + . ID=gene-AD853_RS05785;Name=ydiK;gbkey=Gene;gene=ydiK;gene_biotype=protein_coding;locus_tag=AD853_RS05785;old_locus_tag=ERS008462_01174 NZ_CPUY01000004.1 Protein Homology CDS 196089 197192 . + 0 ID=cds-WP_002211812.1;Parent=gene-AD853_RS05785;Dbxref=GenBank:WP_002211812.1;Name=WP_002211812.1;gbkey=CDS;gene=ydiK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211812.1;locus_tag=AD853_RS05785;product=AI-2E family transporter YdiK;protein_id=WP_002211812.1;transl_table=11 NZ_CPUY01000004.1 RefSeq gene 197456 197565 . + . ID=gene-AD853_RS20345;Name=rprA;gbkey=Gene;gene=rprA;gene_biotype=antisense_RNA;locus_tag=AD853_RS20345 NZ_CPUY01000004.1 cmsearch antisense_RNA 197456 197565 . + . ID=rna-AD853_RS20345;Parent=gene-AD853_RS20345;Dbxref=RFAM:RF00034;gbkey=ncRNA;gene=rprA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD853_RS20345;product=antisense sRNA RprA NZ_CPUY01000004.1 cmsearch exon 197456 197565 . + . ID=exon-AD853_RS20345-1;Parent=rna-AD853_RS20345;Dbxref=RFAM:RF00034;gbkey=ncRNA;gene=rprA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD853_RS20345;product=antisense sRNA RprA NZ_CPUY01000004.1 RefSeq gene 197810 200194 . - . ID=gene-AD853_RS05790;Name=ppsA;gbkey=Gene;gene=ppsA;gene_biotype=protein_coding;locus_tag=AD853_RS05790;old_locus_tag=ERS008462_01176 NZ_CPUY01000004.1 Protein Homology CDS 197810 200194 . - 0 ID=cds-WP_002211813.1;Parent=gene-AD853_RS05790;Dbxref=GenBank:WP_002211813.1;Name=WP_002211813.1;Ontology_term=GO:0006090,GO:0016310,GO:0005524,GO:0008986,GO:0016772;gbkey=CDS;gene=ppsA;go_function=ATP binding|0005524||IEA,pyruvate%2C water dikinase activity|0008986||IEA,transferase activity%2C transferring phosphorus-containing groups|0016772||IEA;go_process=pyruvate metabolic process|0006090||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211813.1;locus_tag=AD853_RS05790;product=phosphoenolpyruvate synthase;protein_id=WP_002211813.1;transl_table=11 NZ_CPUY01000004.1 RefSeq gene 200531 201352 . + . ID=gene-AD853_RS05795;Name=ppsR;gbkey=Gene;gene=ppsR;gene_biotype=protein_coding;locus_tag=AD853_RS05795;old_locus_tag=ERS008462_01177 NZ_CPUY01000004.1 Protein Homology CDS 200531 201352 . + 0 ID=cds-WP_038825313.1;Parent=gene-AD853_RS05795;Dbxref=GenBank:WP_038825313.1;Name=WP_038825313.1;Ontology_term=GO:0004674,GO:0005524,GO:0016776,GO:0043531;gbkey=CDS;gene=ppsR;go_function=protein serine/threonine kinase activity|0004674||IEA,ATP binding|0005524||IEA,phosphotransferase activity%2C phosphate group as acceptor|0016776||IEA,ADP binding|0043531||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016927943.1;locus_tag=AD853_RS05795;product=posphoenolpyruvate synthetase regulatory kinase/phosphorylase PpsR;protein_id=WP_038825313.1;transl_table=11 NZ_CPUY01000004.1 RefSeq gene 201509 202555 . + . ID=gene-AD853_RS05800;Name=AD853_RS05800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS05800;old_locus_tag=ERS008462_01178 NZ_CPUY01000004.1 Protein Homology CDS 201509 202555 . + 0 ID=cds-WP_011192538.1;Parent=gene-AD853_RS05800;Dbxref=GenBank:WP_011192538.1;Name=WP_011192538.1;Ontology_term=GO:0009073,GO:0016832;gbkey=CDS;go_function=aldehyde-lyase activity|0016832||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211815.1;locus_tag=AD853_RS05800;product=3-deoxy-7-phosphoheptulonate synthase;protein_id=WP_011192538.1;transl_table=11 NZ_CPUY01000004.1 RefSeq gene 202724 204187 . - . ID=gene-AD853_RS05805;Name=AD853_RS05805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS05805;old_locus_tag=ERS008462_01179 NZ_CPUY01000004.1 Protein Homology CDS 202724 204187 . - 0 ID=cds-WP_011192539.1;Parent=gene-AD853_RS05805;Dbxref=GenBank:WP_011192539.1;Name=WP_011192539.1;Ontology_term=GO:0000287,GO:0005524,GO:0070733;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,ATP binding|0005524||IEA,AMPylase activity|0070733||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192539.1;locus_tag=AD853_RS05805;product=protein adenylyltransferase SelO;protein_id=WP_011192539.1;transl_table=11 NZ_CPUY01000004.1 RefSeq gene 204239 205255 . - . ID=gene-AD853_RS05810;Name=AD853_RS05810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS05810;old_locus_tag=ERS008462_01180 NZ_CPUY01000004.1 Protein Homology CDS 204239 205255 . - 0 ID=cds-WP_038825312.1;Parent=gene-AD853_RS05810;Dbxref=GenBank:WP_038825312.1;Name=WP_038825312.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418803.1;locus_tag=AD853_RS05810;product=lipoate--protein ligase A;protein_id=WP_038825312.1;transl_table=11 NZ_CPUY01000004.1 RefSeq gene 205380 205844 . - . ID=gene-AD853_RS05815;Name=AD853_RS05815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS05815;old_locus_tag=ERS008462_01181 NZ_CPUY01000004.1 Protein Homology CDS 205380 205844 . - 0 ID=cds-WP_002216102.1;Parent=gene-AD853_RS05815;Dbxref=GenBank:WP_002216102.1;Name=WP_002216102.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002216102.1;locus_tag=AD853_RS05815;product=NlpC/P60 family protein;protein_id=WP_002216102.1;transl_table=11 NZ_CPUY01000004.1 RefSeq gene 205785 205967 . + . ID=gene-AD853_RS20350;Name=AD853_RS20350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS20350 NZ_CPUY01000004.1 Protein Homology CDS 205785 205967 . + 0 ID=cds-WP_002211818.1;Parent=gene-AD853_RS20350;Dbxref=GenBank:WP_002211818.1;Name=WP_002211818.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211818.1;locus_tag=AD853_RS20350;product=hypothetical protein;protein_id=WP_002211818.1;transl_table=11 NZ_CPUY01000004.1 RefSeq gene 206124 206510 . - . ID=gene-AD853_RS05820;Name=arnF;gbkey=Gene;gene=arnF;gene_biotype=protein_coding;locus_tag=AD853_RS05820;old_locus_tag=ERS008462_01182 NZ_CPUY01000004.1 Protein Homology CDS 206124 206510 . - 0 ID=cds-WP_002211819.1;Parent=gene-AD853_RS05820;Dbxref=GenBank:WP_002211819.1;Name=WP_002211819.1;gbkey=CDS;gene=arnF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211819.1;locus_tag=AD853_RS05820;product=4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF;protein_id=WP_002211819.1;transl_table=11 NZ_CPUY01000004.1 RefSeq gene 206507 206851 . - . ID=gene-AD853_RS05825;Name=arnE;gbkey=Gene;gene=arnE;gene_biotype=protein_coding;locus_tag=AD853_RS05825;old_locus_tag=ERS008462_01183 NZ_CPUY01000004.1 Protein Homology CDS 206507 206851 . - 0 ID=cds-WP_011192541.1;Parent=gene-AD853_RS05825;Dbxref=GenBank:WP_011192541.1;Name=WP_011192541.1;gbkey=CDS;gene=arnE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016598707.1;locus_tag=AD853_RS05825;product=4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE;protein_id=WP_011192541.1;transl_table=11 NZ_CPUY01000004.1 RefSeq gene 206848 208512 . - . ID=gene-AD853_RS05830;Name=arnT;gbkey=Gene;gene=arnT;gene_biotype=protein_coding;locus_tag=AD853_RS05830;old_locus_tag=ERS008462_01184 NZ_CPUY01000004.1 Protein Homology CDS 206848 208512 . - 0 ID=cds-WP_038825310.1;Parent=gene-AD853_RS05830;Dbxref=GenBank:WP_038825310.1;Name=WP_038825310.1;Ontology_term=GO:0006493,GO:0000030,GO:0016763,GO:0016020;gbkey=CDS;gene=arnT;go_component=membrane|0016020||IEA;go_function=mannosyltransferase activity|0000030||IEA,pentosyltransferase activity|0016763||IEA;go_process=protein O-linked glycosylation|0006493||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304019.1;locus_tag=AD853_RS05830;product=lipid IV(A) 4-amino-4-deoxy-L-arabinosyltransferase;protein_id=WP_038825310.1;transl_table=11 NZ_CPUY01000004.1 RefSeq gene 208509 209414 . - . ID=gene-AD853_RS05835;Name=arnD;gbkey=Gene;gene=arnD;gene_biotype=protein_coding;locus_tag=AD853_RS05835;old_locus_tag=ERS008462_01185 NZ_CPUY01000004.1 Protein Homology CDS 208509 209414 . - 0 ID=cds-WP_038825309.1;Parent=gene-AD853_RS05835;Dbxref=GenBank:WP_038825309.1;Name=WP_038825309.1;Ontology_term=GO:0016810;gbkey=CDS;gene=arnD;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304018.1;locus_tag=AD853_RS05835;product=4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase;protein_id=WP_038825309.1;transl_table=11 NZ_CPUY01000004.1 RefSeq gene 209411 211414 . - . ID=gene-AD853_RS05840;Name=arnA;gbkey=Gene;gene=arnA;gene_biotype=protein_coding;locus_tag=AD853_RS05840;old_locus_tag=ERS008462_01186 NZ_CPUY01000004.1 Protein Homology CDS 209411 211414 . - 0 ID=cds-WP_038825308.1;Parent=gene-AD853_RS05840;Dbxref=GenBank:WP_038825308.1;Name=WP_038825308.1;Ontology_term=GO:0009058,GO:0016742;gbkey=CDS;gene=arnA;go_function=hydroxymethyl-%2C formyl- and related transferase activity|0016742||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304017.1;locus_tag=AD853_RS05840;product=bifunctional UDP-4-amino-4-deoxy-L-arabinose formyltransferase/UDP-glucuronic acid oxidase ArnA;protein_id=WP_038825308.1;transl_table=11 NZ_CPUY01000004.1 RefSeq gene 211411 212394 . - . ID=gene-AD853_RS05845;Name=arnC;gbkey=Gene;gene=arnC;gene_biotype=protein_coding;locus_tag=AD853_RS05845;old_locus_tag=ERS008462_01187 NZ_CPUY01000004.1 Protein Homology CDS 211411 212394 . - 0 ID=cds-WP_011192543.1;Parent=gene-AD853_RS05845;Dbxref=GenBank:WP_011192543.1;Name=WP_011192543.1;Ontology_term=GO:0016780;gbkey=CDS;gene=arnC;go_function=phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211824.1;locus_tag=AD853_RS05845;product=undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase;protein_id=WP_011192543.1;transl_table=11 NZ_CPUY01000004.1 RefSeq gene 212381 213535 . - . ID=gene-AD853_RS05850;Name=arnB;gbkey=Gene;gene=arnB;gene_biotype=protein_coding;locus_tag=AD853_RS05850;old_locus_tag=ERS008462_01188 NZ_CPUY01000004.1 Protein Homology CDS 212381 213535 . - 0 ID=cds-WP_038825307.1;Parent=gene-AD853_RS05850;Dbxref=GenBank:WP_038825307.1;Name=WP_038825307.1;Ontology_term=GO:0008483;gbkey=CDS;gene=arnB;go_function=transaminase activity|0008483||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004874218.1;locus_tag=AD853_RS05850;product=UDP-4-amino-4-deoxy-L-arabinose aminotransferase;protein_id=WP_038825307.1;transl_table=11 NZ_CPUY01000004.1 RefSeq gene 213885 214643 . - . ID=gene-AD853_RS05855;Name=btuD;gbkey=Gene;gene=btuD;gene_biotype=protein_coding;locus_tag=AD853_RS05855;old_locus_tag=ERS008462_01189 NZ_CPUY01000004.1 Protein Homology CDS 213885 214643 . - 0 ID=cds-WP_038825306.1;Parent=gene-AD853_RS05855;Dbxref=GenBank:WP_038825306.1;Name=WP_038825306.1;Ontology_term=GO:0015889,GO:0005524;gbkey=CDS;gene=btuD;go_function=ATP binding|0005524||IEA;go_process=cobalamin transport|0015889||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211826.1;locus_tag=AD853_RS05855;product=vitamin B12 ABC transporter ATP-binding protein BtuD;protein_id=WP_038825306.1;transl_table=11 NZ_CPUY01000004.1 RefSeq gene 214668 215222 . - . ID=gene-AD853_RS05860;Name=AD853_RS05860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS05860;old_locus_tag=ERS008462_01190 NZ_CPUY01000004.1 Protein Homology CDS 214668 215222 . - 0 ID=cds-WP_002211827.1;Parent=gene-AD853_RS05860;Dbxref=GenBank:WP_002211827.1;Name=WP_002211827.1;Ontology_term=GO:0006979,GO:0004602;gbkey=CDS;go_function=glutathione peroxidase activity|0004602||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211827.1;locus_tag=AD853_RS05860;product=glutathione peroxidase;protein_id=WP_002211827.1;transl_table=11 NZ_CPUY01000004.1 RefSeq gene 215292 216299 . - . ID=gene-AD853_RS05865;Name=btuC;gbkey=Gene;gene=btuC;gene_biotype=protein_coding;locus_tag=AD853_RS05865;old_locus_tag=ERS008462_01191 NZ_CPUY01000004.1 Protein Homology CDS 215292 216299 . - 0 ID=cds-WP_002220283.1;Parent=gene-AD853_RS05865;Dbxref=GenBank:WP_002220283.1;Name=WP_002220283.1;Ontology_term=GO:0005524,GO:0022857;gbkey=CDS;gene=btuC;go_function=ATP binding|0005524||IEA,transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002220283.1;locus_tag=AD853_RS05865;product=vitamin B12 ABC transporter permease BtuC;protein_id=WP_002220283.1;transl_table=11 NZ_CPUY01000004.1 RefSeq gene 216508 216966 . - . ID=gene-AD853_RS05870;Name=AD853_RS05870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS05870;old_locus_tag=ERS008462_01192 NZ_CPUY01000004.1 Protein Homology CDS 216508 216966 . - 0 ID=cds-WP_012105022.1;Parent=gene-AD853_RS05870;Dbxref=GenBank:WP_012105022.1;Name=WP_012105022.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105022.1;locus_tag=AD853_RS05870;product=DUF2502 domain-containing protein;protein_id=WP_012105022.1;transl_table=11 NZ_CPUY01000004.1 RefSeq gene 217300 217596 . - . ID=gene-AD853_RS05875;Name=ihfA;gbkey=Gene;gene=ihfA;gene_biotype=protein_coding;locus_tag=AD853_RS05875;old_locus_tag=ERS008462_01193 NZ_CPUY01000004.1 Protein Homology CDS 217300 217596 . - 0 ID=cds-WP_002211830.1;Parent=gene-AD853_RS05875;Dbxref=GenBank:WP_002211830.1;Name=WP_002211830.1;Ontology_term=GO:0006310,GO:0006355,GO:0003677;gbkey=CDS;gene=ihfA;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460305.1;locus_tag=AD853_RS05875;product=integration host factor subunit alpha;protein_id=WP_002211830.1;transl_table=11 NZ_CPUY01000004.1 RefSeq gene 217601 219988 . - . ID=gene-AD853_RS05880;Name=pheT;gbkey=Gene;gene=pheT;gene_biotype=protein_coding;locus_tag=AD853_RS05880;old_locus_tag=ERS008462_01194 NZ_CPUY01000004.1 Protein Homology CDS 217601 219988 . - 0 ID=cds-WP_038825304.1;Parent=gene-AD853_RS05880;Dbxref=GenBank:WP_038825304.1;Name=WP_038825304.1;Ontology_term=GO:0006432,GO:0000287,GO:0004826,GO:0005524;gbkey=CDS;gene=pheT;go_function=magnesium ion binding|0000287||IEA,phenylalanine-tRNA ligase activity|0004826||IEA,ATP binding|0005524||IEA;go_process=phenylalanyl-tRNA aminoacylation|0006432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310447.1;locus_tag=AD853_RS05880;product=phenylalanine--tRNA ligase subunit beta;protein_id=WP_038825304.1;transl_table=11 NZ_CPUY01000004.1 RefSeq gene 220002 220985 . - . ID=gene-AD853_RS05885;Name=pheS;gbkey=Gene;gene=pheS;gene_biotype=protein_coding;locus_tag=AD853_RS05885;old_locus_tag=ERS008462_01195 NZ_CPUY01000004.1 Protein Homology CDS 220002 220985 . - 0 ID=cds-WP_011192546.1;Parent=gene-AD853_RS05885;Dbxref=GenBank:WP_011192546.1;Name=WP_011192546.1;Ontology_term=GO:0006432,GO:0000166,GO:0004826,GO:0005524,GO:0005737;gbkey=CDS;gene=pheS;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,phenylalanine-tRNA ligase activity|0004826||IEA,ATP binding|0005524||IEA;go_process=phenylalanyl-tRNA aminoacylation|0006432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004851795.1;locus_tag=AD853_RS05885;product=phenylalanine--tRNA ligase subunit alpha;protein_id=WP_011192546.1;transl_table=11 NZ_CPUY01000004.1 cmsearch sequence_feature 221268 221390 . - . ID=id-NZ_CPUY01000004.1:221268..221390;Dbxref=RFAM:RF01859;Note=Phe leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.5 NZ_CPUY01000004.1 RefSeq gene 221342 221389 . - . ID=gene-AD853_RS22595;Name=pheM;gbkey=Gene;gene=pheM;gene_biotype=protein_coding;locus_tag=AD853_RS22595 NZ_CPUY01000004.1 Protein Homology CDS 221342 221389 . - 0 ID=cds-WP_152328947.1;Parent=gene-AD853_RS22595;Dbxref=GenBank:WP_152328947.1;Name=WP_152328947.1;Ontology_term=GO:0031556;gbkey=CDS;gene=pheM;go_process=transcriptional attenuation by ribosome|0031556||IEA;inference=COORDINATES: protein motif:HMM:NF033686.1;locus_tag=AD853_RS22595;product=pheST operon leader peptide PheM;protein_id=WP_152328947.1;transl_table=11 NZ_CPUY01000004.1 RefSeq gene 221484 221840 . - . ID=gene-AD853_RS05890;Name=rplT;gbkey=Gene;gene=rplT;gene_biotype=protein_coding;locus_tag=AD853_RS05890;old_locus_tag=ERS008462_01197 NZ_CPUY01000004.1 Protein Homology CDS 221484 221840 . - 0 ID=cds-WP_002211833.1;Parent=gene-AD853_RS05890;Dbxref=GenBank:WP_002211833.1;Name=WP_002211833.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplT;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009635878.1;locus_tag=AD853_RS05890;product=50S ribosomal protein L20;protein_id=WP_002211833.1;transl_table=11 NZ_CPUY01000004.1 RefSeq gene 221878 222075 . - . ID=gene-AD853_RS05895;Name=rpmI;gbkey=Gene;gene=rpmI;gene_biotype=protein_coding;locus_tag=AD853_RS05895;old_locus_tag=ERS008462_01198 NZ_CPUY01000004.1 Protein Homology CDS 221878 222075 . - 0 ID=cds-WP_002211834.1;Parent=gene-AD853_RS05895;Dbxref=GenBank:WP_002211834.1;Name=WP_002211834.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmI;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006708231.1;locus_tag=AD853_RS05895;product=50S ribosomal protein L35;protein_id=WP_002211834.1;transl_table=11 NZ_CPUY01000004.1 RefSeq gene 222172 222723 . - . ID=gene-AD853_RS20355;Name=infC;gbkey=Gene;gene=infC;gene_biotype=protein_coding;locus_tag=AD853_RS20355 NZ_CPUY01000004.1 Protein Homology CDS 222172 222723 . - 0 ID=cds-WP_002227898.1;Parent=gene-AD853_RS20355;Dbxref=GenBank:WP_002227898.1;Name=WP_002227898.1;Ontology_term=GO:0006413,GO:0003743;gbkey=CDS;gene=infC;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310452.1;locus_tag=AD853_RS20355;product=translation initiation factor IF-3;protein_id=WP_002227898.1;transl_table=11 NZ_CPUY01000004.1 RefSeq gene 222727 224655 . - . ID=gene-AD853_RS05905;Name=thrS;gbkey=Gene;gene=thrS;gene_biotype=protein_coding;locus_tag=AD853_RS05905;old_locus_tag=ERS008462_01200 NZ_CPUY01000004.1 Protein Homology CDS 222727 224655 . - 0 ID=cds-WP_002211836.1;Parent=gene-AD853_RS05905;Dbxref=GenBank:WP_002211836.1;Name=WP_002211836.1;Ontology_term=GO:0006435,GO:0004829,GO:0005524,GO:0005737;gbkey=CDS;gene=thrS;go_component=cytoplasm|0005737||IEA;go_function=threonine-tRNA ligase activity|0004829||IEA,ATP binding|0005524||IEA;go_process=threonyl-tRNA aminoacylation|0006435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006894721.1;locus_tag=AD853_RS05905;product=threonine--tRNA ligase;protein_id=WP_002211836.1;transl_table=11 NZ_CPUY01000004.1 RefSeq gene 225046 225258 . + . ID=gene-AD853_RS05910;Name=AD853_RS05910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS05910;old_locus_tag=ERS008462_01201 NZ_CPUY01000004.1 Protein Homology CDS 225046 225258 . + 0 ID=cds-WP_002216696.1;Parent=gene-AD853_RS05910;Dbxref=GenBank:WP_002216696.1;Name=WP_002216696.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002216696.1;locus_tag=AD853_RS05910;product=KTSC domain-containing protein;protein_id=WP_002216696.1;transl_table=11 NZ_CPUY01000004.1 RefSeq gene 226017 226268 . - . ID=gene-AD853_RS05920;Name=AD853_RS05920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS05920;old_locus_tag=ERS008462_01202 NZ_CPUY01000004.1 Protein Homology CDS 226017 226268 . - 0 ID=cds-WP_038825303.1;Parent=gene-AD853_RS05920;Dbxref=GenBank:WP_038825303.1;Name=WP_038825303.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211839.1;locus_tag=AD853_RS05920;product=hypothetical protein;protein_id=WP_038825303.1;transl_table=11 NZ_CPUY01000004.1 RefSeq gene 226587 227270 . + . ID=gene-AD853_RS05925;Name=AD853_RS05925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS05925;old_locus_tag=ERS008462_01203 NZ_CPUY01000004.1 Protein Homology CDS 226587 227270 . + 0 ID=cds-WP_002211840.1;Parent=gene-AD853_RS05925;Dbxref=GenBank:WP_002211840.1;Name=WP_002211840.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211840.1;locus_tag=AD853_RS05925;product=MarC family NAAT transporter;protein_id=WP_002211840.1;transl_table=11 NZ_CPUY01000004.1 RefSeq gene 227392 228054 . - . ID=gene-AD853_RS05930;Name=AD853_RS05930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS05930;old_locus_tag=ERS008462_01204 NZ_CPUY01000004.1 Protein Homology CDS 227392 228054 . - 0 ID=cds-WP_002216686.1;Parent=gene-AD853_RS05930;Dbxref=GenBank:WP_002216686.1;Name=WP_002216686.1;Ontology_term=GO:0000270,GO:0071555,GO:0008933;gbkey=CDS;go_function=peptidoglycan lytic transglycosylase activity|0008933||IEA;go_process=peptidoglycan metabolic process|0000270||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002216686.1;locus_tag=AD853_RS05930;product=transglycosylase SLT domain-containing protein;protein_id=WP_002216686.1;transl_table=11 NZ_CPUY01000004.1 RefSeq gene 228266 229234 . + . ID=gene-AD853_RS05935;Name=yfeA;gbkey=Gene;gene=yfeA;gene_biotype=protein_coding;locus_tag=AD853_RS05935;old_locus_tag=ERS008462_01205 NZ_CPUY01000004.1 Protein Homology CDS 228266 229234 . + 0 ID=cds-WP_002211842.1;Parent=gene-AD853_RS05935;Dbxref=GenBank:WP_002211842.1;Name=WP_002211842.1;gbkey=CDS;gene=yfeA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211842.1;locus_tag=AD853_RS05935;product=iron/manganese ABC transporter substrate-binding protein YfeA;protein_id=WP_002211842.1;transl_table=11 NZ_CPUY01000004.1 RefSeq pseudogene 229231 230144 . + . ID=gene-AD853_RS05940;Name=yfeB;gbkey=Gene;gene=yfeB;gene_biotype=pseudogene;locus_tag=AD853_RS05940;old_locus_tag=ERS008462_01207;pseudo=true NZ_CPUY01000004.1 Protein Homology CDS 229231 230144 . + 0 ID=cds-AD853_RS05940;Parent=gene-AD853_RS05940;Note=frameshifted;gbkey=CDS;gene=yfeB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211843.1;locus_tag=AD853_RS05940;product=iron/manganese ABC transporter ATP-binding protein YfeB;pseudo=true;transl_table=11 NZ_CPUY01000004.1 RefSeq gene 230144 231028 . + . ID=gene-AD853_RS05945;Name=yfeC;gbkey=Gene;gene=yfeC;gene_biotype=protein_coding;locus_tag=AD853_RS05945;old_locus_tag=ERS008462_01208 NZ_CPUY01000004.1 Protein Homology CDS 230144 231028 . + 0 ID=cds-WP_038825302.1;Parent=gene-AD853_RS05945;Dbxref=GenBank:WP_038825302.1;Name=WP_038825302.1;gbkey=CDS;gene=yfeC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211844.1;locus_tag=AD853_RS05945;product=iron/manganese ABC transporter permease subunit YfeC;protein_id=WP_038825302.1;transl_table=11 NZ_CPUY01000004.1 RefSeq pseudogene 231025 231918 . + . ID=gene-AD853_RS05950;Name=yfeD;gbkey=Gene;gene=yfeD;gene_biotype=pseudogene;locus_tag=AD853_RS05950;old_locus_tag=ERS008462_01210;pseudo=true NZ_CPUY01000004.1 Protein Homology CDS 231025 231918 . + 0 ID=cds-AD853_RS05950;Parent=gene-AD853_RS05950;Note=internal stop;gbkey=CDS;gene=yfeD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_128129395.1;locus_tag=AD853_RS05950;product=iron/manganese ABC transporter permease subunit YfeD;pseudo=true;transl_table=11 NZ_CPUY01000004.1 RefSeq pseudogene 231986 232197 . + . ID=gene-AD853_RS05955;Name=AD853_RS05955;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD853_RS05955;pseudo=true NZ_CPUY01000004.1 Protein Homology CDS 231986 232197 . + 0 ID=cds-AD853_RS05955;Parent=gene-AD853_RS05955;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002216683.1;locus_tag=AD853_RS05955;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CPUY01000004.1 RefSeq gene 232222 233097 . + . ID=gene-AD853_RS05960;Name=AD853_RS05960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS05960;old_locus_tag=ERS008462_01211 NZ_CPUY01000004.1 Protein Homology CDS 232222 233097 . + 0 ID=cds-WP_002211846.1;Parent=gene-AD853_RS05960;Dbxref=GenBank:WP_002211846.1;Name=WP_002211846.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211846.1;locus_tag=AD853_RS05960;product=fructosamine kinase family protein;protein_id=WP_002211846.1;transl_table=11 NZ_CPUY01000004.1 RefSeq gene 233226 233780 . - . ID=gene-AD853_RS05965;Name=AD853_RS05965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS05965;old_locus_tag=ERS008462_01212 NZ_CPUY01000004.1 Protein Homology CDS 233226 233780 . - 0 ID=cds-WP_002211847.1;Parent=gene-AD853_RS05965;Dbxref=GenBank:WP_002211847.1;Name=WP_002211847.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211847.1;locus_tag=AD853_RS05965;product=YniB family protein;protein_id=WP_002211847.1;transl_table=11 NZ_CPUY01000004.1 RefSeq gene 234191 234856 . + . ID=gene-AD853_RS05970;Name=hxpB;gbkey=Gene;gene=hxpB;gene_biotype=protein_coding;locus_tag=AD853_RS05970;old_locus_tag=ERS008462_01213 NZ_CPUY01000004.1 Protein Homology CDS 234191 234856 . + 0 ID=cds-WP_002220277.1;Parent=gene-AD853_RS05970;Dbxref=GenBank:WP_002220277.1;Name=WP_002220277.1;gbkey=CDS;gene=hxpB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004875260.1;locus_tag=AD853_RS05970;product=hexitol phosphatase HxpB;protein_id=WP_002220277.1;transl_table=11 NZ_CPUY01000004.1 RefSeq gene 235041 235373 . - . ID=gene-AD853_RS05975;Name=AD853_RS05975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS05975;old_locus_tag=ERS008462_01214 NZ_CPUY01000004.1 Protein Homology CDS 235041 235373 . - 0 ID=cds-WP_012105016.1;Parent=gene-AD853_RS05975;Dbxref=GenBank:WP_012105016.1;Name=WP_012105016.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013318064.1;locus_tag=AD853_RS05975;product=cupin domain-containing protein;protein_id=WP_012105016.1;transl_table=11 NZ_CPUY01000004.1 RefSeq gene 235709 236545 . + . ID=gene-AD853_RS05980;Name=kduI;gbkey=Gene;gene=kduI;gene_biotype=protein_coding;locus_tag=AD853_RS05980;old_locus_tag=ERS008462_01215 NZ_CPUY01000004.1 Protein Homology CDS 235709 236545 . + 0 ID=cds-WP_012105015.1;Parent=gene-AD853_RS05980;Dbxref=GenBank:WP_012105015.1;Name=WP_012105015.1;Ontology_term=GO:0045490,GO:0008697;gbkey=CDS;gene=kduI;go_function=4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase activity|0008697||IEA;go_process=pectin catabolic process|0045490||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004713043.1;locus_tag=AD853_RS05980;product=5-dehydro-4-deoxy-D-glucuronate isomerase;protein_id=WP_012105015.1;transl_table=11 NZ_CPUY01000004.1 RefSeq gene 236637 237398 . + . ID=gene-AD853_RS05985;Name=kduD;gbkey=Gene;gene=kduD;gene_biotype=protein_coding;locus_tag=AD853_RS05985;old_locus_tag=ERS008462_01216 NZ_CPUY01000004.1 Protein Homology CDS 236637 237398 . + 0 ID=cds-WP_002210830.1;Parent=gene-AD853_RS05985;Dbxref=GenBank:WP_002210830.1;Name=WP_002210830.1;Ontology_term=GO:0000272,GO:0016491,GO:0051287;gbkey=CDS;gene=kduD;go_function=oxidoreductase activity|0016491||IEA,NAD binding|0051287||IEA;go_process=polysaccharide catabolic process|0000272||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228631.1;locus_tag=AD853_RS05985;product=2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase KduD;protein_id=WP_002210830.1;transl_table=11 NZ_CPUY01000004.1 RefSeq gene 237743 239404 . + . ID=gene-AD853_RS05990;Name=AD853_RS05990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS05990;old_locus_tag=ERS008462_01217 NZ_CPUY01000004.1 Protein Homology CDS 237743 239404 . + 0 ID=cds-WP_038825299.1;Parent=gene-AD853_RS05990;Dbxref=GenBank:WP_038825299.1;Name=WP_038825299.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012229773.1;locus_tag=AD853_RS05990;product=pectate lyase;protein_id=WP_038825299.1;transl_table=11 NZ_CPUY01000004.1 RefSeq gene 239420 240310 . + . ID=gene-AD853_RS05995;Name=AD853_RS05995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS05995;old_locus_tag=ERS008462_01218 NZ_CPUY01000004.1 Protein Homology CDS 239420 240310 . + 0 ID=cds-WP_002210832.1;Parent=gene-AD853_RS05995;Dbxref=GenBank:WP_002210832.1;Name=WP_002210832.1;Ontology_term=GO:0008643,GO:0055085,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017802312.1;locus_tag=AD853_RS05995;product=carbohydrate ABC transporter permease;protein_id=WP_002210832.1;transl_table=11 NZ_CPUY01000004.1 RefSeq gene 240303 241223 . + . ID=gene-AD853_RS06000;Name=AD853_RS06000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS06000;old_locus_tag=ERS008462_01219 NZ_CPUY01000004.1 Protein Homology CDS 240303 241223 . + 0 ID=cds-WP_002210833.1;Parent=gene-AD853_RS06000;Dbxref=GenBank:WP_002210833.1;Name=WP_002210833.1;Ontology_term=GO:0008643,GO:0055085;gbkey=CDS;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016583148.1;locus_tag=AD853_RS06000;product=carbohydrate ABC transporter permease;protein_id=WP_002210833.1;transl_table=11 NZ_CPUY01000004.1 RefSeq gene 241237 242364 . + . ID=gene-AD853_RS06005;Name=AD853_RS06005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS06005;old_locus_tag=ERS008462_01220 NZ_CPUY01000004.1 Protein Homology CDS 241237 242364 . + 0 ID=cds-WP_002210834.1;Parent=gene-AD853_RS06005;Dbxref=GenBank:WP_002210834.1;Name=WP_002210834.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228623.1;locus_tag=AD853_RS06005;product=ABC transporter ATP-binding protein;protein_id=WP_002210834.1;transl_table=11 NZ_CPUY01000004.1 RefSeq gene 242380 243672 . + . ID=gene-AD853_RS06010;Name=AD853_RS06010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS06010;old_locus_tag=ERS008462_01221 NZ_CPUY01000004.1 Protein Homology CDS 242380 243672 . + 0 ID=cds-WP_038825298.1;Parent=gene-AD853_RS06010;Dbxref=GenBank:WP_038825298.1;Name=WP_038825298.1;Ontology_term=GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012229775.1;locus_tag=AD853_RS06010;product=ABC transporter substrate-binding protein;protein_id=WP_038825298.1;transl_table=11 NZ_CPUY01000004.1 RefSeq gene 243970 244680 . + . ID=gene-AD853_RS06015;Name=AD853_RS06015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS06015;old_locus_tag=ERS008462_01222 NZ_CPUY01000004.1 Protein Homology CDS 243970 244680 . + 0 ID=cds-WP_002210836.1;Parent=gene-AD853_RS06015;Dbxref=GenBank:WP_002210836.1;Name=WP_002210836.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210836.1;locus_tag=AD853_RS06015;product=oligogalacturonate-specific porin KdgM family protein;protein_id=WP_002210836.1;transl_table=11 NZ_CPUY01000004.1 RefSeq gene 245160 245708 . + . ID=gene-AD853_RS06020;Name=AD853_RS06020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS06020;old_locus_tag=ERS008462_01223 NZ_CPUY01000004.1 Protein Homology CDS 245160 245708 . + 0 ID=cds-WP_002210837.1;Parent=gene-AD853_RS06020;Dbxref=GenBank:WP_002210837.1;Name=WP_002210837.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016674211.1;locus_tag=AD853_RS06020;product=metal-dependent hydrolase;protein_id=WP_002210837.1;transl_table=11 NZ_CPUY01000004.1 RefSeq gene 245912 247303 . + . ID=gene-AD853_RS06025;Name=AD853_RS06025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS06025;old_locus_tag=ERS008462_01224 NZ_CPUY01000004.1 Protein Homology CDS 245912 247303 . + 0 ID=cds-WP_002210838.1;Parent=gene-AD853_RS06025;Dbxref=GenBank:WP_002210838.1;Name=WP_002210838.1;Ontology_term=GO:0005215;gbkey=CDS;go_function=transporter activity|0005215||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460286.1;locus_tag=AD853_RS06025;product=L-cystine transporter;protein_id=WP_002210838.1;transl_table=11 NZ_CPUY01000004.1 RefSeq gene 247518 248369 . - . ID=gene-AD853_RS06030;Name=AD853_RS06030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS06030;old_locus_tag=ERS008462_01225 NZ_CPUY01000004.1 Protein Homology CDS 247518 248369 . - 0 ID=cds-WP_002210839.1;Parent=gene-AD853_RS06030;Dbxref=GenBank:WP_002210839.1;Name=WP_002210839.1;Ontology_term=GO:0009253,GO:0008745;gbkey=CDS;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304011.1;locus_tag=AD853_RS06030;product=N-acetylmuramoyl-L-alanine amidase;protein_id=WP_002210839.1;transl_table=11 NZ_CPUY01000004.1 RefSeq gene 248754 249545 . - . ID=gene-AD853_RS06035;Name=kdgR;gbkey=Gene;gene=kdgR;gene_biotype=protein_coding;locus_tag=AD853_RS06035;old_locus_tag=ERS008462_01226 NZ_CPUY01000004.1 Protein Homology CDS 248754 249545 . - 0 ID=cds-WP_002210840.1;Parent=gene-AD853_RS06035;Dbxref=GenBank:WP_002210840.1;Name=WP_002210840.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=kdgR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416341.1;locus_tag=AD853_RS06035;product=DNA-binding transcriptional regulator KdgR;protein_id=WP_002210840.1;transl_table=11 NZ_CPUY01000004.1 RefSeq gene 249732 250898 . - . ID=gene-AD853_RS06040;Name=ogl;gbkey=Gene;gene=ogl;gene_biotype=protein_coding;locus_tag=AD853_RS06040;old_locus_tag=ERS008462_01227 NZ_CPUY01000004.1 Protein Homology CDS 249732 250898 . - 0 ID=cds-WP_011192552.1;Parent=gene-AD853_RS06040;Dbxref=GenBank:WP_011192552.1;Name=WP_011192552.1;gbkey=CDS;gene=ogl;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011816209.1;locus_tag=AD853_RS06040;product=oligogalacturonate lyase;protein_id=WP_011192552.1;transl_table=11 NZ_CPUY01000004.1 RefSeq pseudogene 251245 252613 . + . ID=gene-AD853_RS06045;Name=AD853_RS06045;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD853_RS06045;old_locus_tag=ERS008462_01228;pseudo=true NZ_CPUY01000004.1 Protein Homology CDS 251245 252613 . + 0 ID=cds-AD853_RS06045;Parent=gene-AD853_RS06045;Note=frameshifted;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002230240.1;locus_tag=AD853_RS06045;product=MFS transporter;pseudo=true;transl_table=11 NZ_CPUY01000004.1 RefSeq gene 252667 253470 . - . ID=gene-AD853_RS06050;Name=AD853_RS06050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS06050;old_locus_tag=ERS008462_01229 NZ_CPUY01000004.1 Protein Homology CDS 252667 253470 . - 0 ID=cds-WP_002210843.1;Parent=gene-AD853_RS06050;Dbxref=GenBank:WP_002210843.1;Name=WP_002210843.1;Ontology_term=GO:0006457,GO:0043711,GO:0030288;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_process=protein folding|0006457||IEA,pilus organization|0043711||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210843.1;locus_tag=AD853_RS06050;product=fimbrial biogenesis chaperone;protein_id=WP_002210843.1;transl_table=11 NZ_CPUY01000004.1 RefSeq pseudogene 253467 254155 . - . ID=gene-AD853_RS06055;Name=AD853_RS06055;end_range=254155,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD853_RS06055;old_locus_tag=ERS008462_01230;partial=true;pseudo=true NZ_CPUY01000004.1 Protein Homology CDS 253467 254155 . - 0 ID=cds-AD853_RS06055;Parent=gene-AD853_RS06055;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0007155,GO:0009289;end_range=254155,.;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002215120.1;locus_tag=AD853_RS06055;partial=true;product=fimbrial protein;pseudo=true;transl_table=11 ##sequence-region NZ_CPUY01000005.1 1 236228 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=633 NZ_CPUY01000005.1 RefSeq region 1 236228 . + . ID=NZ_CPUY01000005.1:1..236228;Dbxref=taxon:633;collection-date=1900/2008;country=South Africa;gbkey=Src;genome=genomic;isolation-source=not known;mol_type=genomic DNA;nat-host=pig;serovar=O:3;strain=IP32544 NZ_CPUY01000005.1 RefSeq gene 432 1094 . - . ID=gene-AD853_RS06060;Name=AD853_RS06060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS06060;old_locus_tag=ERS008462_01231 NZ_CPUY01000005.1 Protein Homology CDS 432 1094 . - 0 ID=cds-WP_038824878.1;Parent=gene-AD853_RS06060;Dbxref=GenBank:WP_038824878.1;Name=WP_038824878.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192645.1;locus_tag=AD853_RS06060;product=NleF caspase inhibitor;protein_id=WP_038824878.1;transl_table=11 NZ_CPUY01000005.1 RefSeq gene 1278 1850 . - . ID=gene-AD853_RS06065;Name=AD853_RS06065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS06065;old_locus_tag=ERS008462_01232 NZ_CPUY01000005.1 Protein Homology CDS 1278 1850 . - 0 ID=cds-WP_038824877.1;Parent=gene-AD853_RS06065;Dbxref=GenBank:WP_038824877.1;Name=WP_038824877.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012104927.1;locus_tag=AD853_RS06065;product=NleF caspase inhibitor;protein_id=WP_038824877.1;transl_table=11 NZ_CPUY01000005.1 RefSeq gene 2088 3026 . - . ID=gene-AD853_RS06070;Name=AD853_RS06070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS06070;old_locus_tag=ERS008462_01233 NZ_CPUY01000005.1 Protein Homology CDS 2088 3026 . - 0 ID=cds-WP_038824875.1;Parent=gene-AD853_RS06070;Dbxref=GenBank:WP_038824875.1;Name=WP_038824875.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012413799.1;locus_tag=AD853_RS06070;product=cation diffusion facilitator family transporter;protein_id=WP_038824875.1;transl_table=11 NZ_CPUY01000005.1 RefSeq gene 3342 3866 . - . ID=gene-AD853_RS06075;Name=ompX;gbkey=Gene;gene=ompX;gene_biotype=protein_coding;locus_tag=AD853_RS06075;old_locus_tag=ERS008462_01234 NZ_CPUY01000005.1 Protein Homology CDS 3342 3866 . - 0 ID=cds-WP_002210229.1;Parent=gene-AD853_RS06075;Dbxref=GenBank:WP_002210229.1;Name=WP_002210229.1;gbkey=CDS;gene=ompX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210229.1;locus_tag=AD853_RS06075;product=outer membrane protein OmpX;protein_id=WP_002210229.1;transl_table=11 NZ_CPUY01000005.1 RefSeq gene 4271 5158 . + . ID=gene-AD853_RS06080;Name=rhtA;gbkey=Gene;gene=rhtA;gene_biotype=protein_coding;locus_tag=AD853_RS06080;old_locus_tag=ERS008462_01235 NZ_CPUY01000005.1 Protein Homology CDS 4271 5158 . + 0 ID=cds-WP_050124575.1;Parent=gene-AD853_RS06080;Dbxref=GenBank:WP_050124575.1;Name=WP_050124575.1;gbkey=CDS;gene=rhtA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012303946.1;locus_tag=AD853_RS06080;product=threonine/homoserine exporter RhtA;protein_id=WP_050124575.1;transl_table=11 NZ_CPUY01000005.1 RefSeq gene 5174 5671 . + . ID=gene-AD853_RS06085;Name=AD853_RS06085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS06085;old_locus_tag=ERS008462_01236 NZ_CPUY01000005.1 Protein Homology CDS 5174 5671 . + 0 ID=cds-WP_038824874.1;Parent=gene-AD853_RS06085;Dbxref=GenBank:WP_038824874.1;Name=WP_038824874.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210231.1;locus_tag=AD853_RS06085;product=GNAT family N-acetyltransferase;protein_id=WP_038824874.1;transl_table=11 NZ_CPUY01000005.1 RefSeq gene 5694 6470 . + . ID=gene-AD853_RS06090;Name=tam;gbkey=Gene;gene=tam;gene_biotype=protein_coding;locus_tag=AD853_RS06090;old_locus_tag=ERS008462_01237 NZ_CPUY01000005.1 Protein Homology CDS 5694 6470 . + 0 ID=cds-WP_002210232.1;Parent=gene-AD853_RS06090;Dbxref=GenBank:WP_002210232.1;Name=WP_002210232.1;Ontology_term=GO:0030798;gbkey=CDS;gene=tam;go_function=trans-aconitate 2-methyltransferase activity|0030798||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012104924.1;locus_tag=AD853_RS06090;product=trans-aconitate 2-methyltransferase;protein_id=WP_002210232.1;transl_table=11 NZ_CPUY01000005.1 RefSeq gene 6728 7231 . + . ID=gene-AD853_RS06095;Name=dps;gbkey=Gene;gene=dps;gene_biotype=protein_coding;gene_synonym=pexB;locus_tag=AD853_RS06095;old_locus_tag=ERS008462_01238 NZ_CPUY01000005.1 Protein Homology CDS 6728 7231 . + 0 ID=cds-WP_002210233.1;Parent=gene-AD853_RS06095;Dbxref=GenBank:WP_002210233.1;Name=WP_002210233.1;Ontology_term=GO:0016722;gbkey=CDS;gene=dps;go_function=oxidoreductase activity%2C acting on metal ions|0016722||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005187524.1;locus_tag=AD853_RS06095;product=DNA starvation/stationary phase protection protein Dps;protein_id=WP_002210233.1;transl_table=11 NZ_CPUY01000005.1 RefSeq gene 7551 8678 . + . ID=gene-AD853_RS06100;Name=AD853_RS06100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS06100;old_locus_tag=ERS008462_01239 NZ_CPUY01000005.1 Protein Homology CDS 7551 8678 . + 0 ID=cds-WP_002210234.1;Parent=gene-AD853_RS06100;Dbxref=GenBank:WP_002210234.1;Name=WP_002210234.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002229928.1;locus_tag=AD853_RS06100;product=YdcF family protein;protein_id=WP_002210234.1;transl_table=11 NZ_CPUY01000005.1 RefSeq gene 9248 9991 . + . ID=gene-AD853_RS06105;Name=glnH;gbkey=Gene;gene=glnH;gene_biotype=protein_coding;locus_tag=AD853_RS06105;old_locus_tag=ERS008462_01240 NZ_CPUY01000005.1 Protein Homology CDS 9248 9991 . + 0 ID=cds-WP_011192648.1;Parent=gene-AD853_RS06105;Dbxref=GenBank:WP_011192648.1;Name=WP_011192648.1;Ontology_term=GO:1903803,GO:0015599,GO:0043190;gbkey=CDS;gene=glnH;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled L-glutamine transmembrane transporter activity|0015599||IEA;go_process=L-glutamine import across plasma membrane|1903803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123681.1;locus_tag=AD853_RS06105;product=glutamine ABC transporter substrate-binding protein GlnH;protein_id=WP_011192648.1;transl_table=11 NZ_CPUY01000005.1 RefSeq gene 10026 10682 . + . ID=gene-AD853_RS06110;Name=glnP;gbkey=Gene;gene=glnP;gene_biotype=protein_coding;locus_tag=AD853_RS06110;old_locus_tag=ERS008462_01241 NZ_CPUY01000005.1 Protein Homology CDS 10026 10682 . + 0 ID=cds-WP_002210236.1;Parent=gene-AD853_RS06110;Dbxref=GenBank:WP_002210236.1;Name=WP_002210236.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020,GO:0043190;gbkey=CDS;gene=glnP;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015367581.1;locus_tag=AD853_RS06110;product=glutamine ABC transporter permease GlnP;protein_id=WP_002210236.1;transl_table=11 NZ_CPUY01000005.1 RefSeq pseudogene 10679 11390 . + . ID=gene-AD853_RS06115;Name=glnQ;gbkey=Gene;gene=glnQ;gene_biotype=pseudogene;locus_tag=AD853_RS06115;old_locus_tag=ERS008462_01242;pseudo=true NZ_CPUY01000005.1 Protein Homology CDS 10679 11390 . + 0 ID=cds-AD853_RS06115;Parent=gene-AD853_RS06115;Note=frameshifted;Ontology_term=GO:0003333,GO:0005524,GO:0015424;gbkey=CDS;gene=glnQ;go_function=ATP binding|0005524||IEA,ABC-type amino acid transporter activity|0015424||IEA;go_process=amino acid transmembrane transport|0003333||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000569103.1;locus_tag=AD853_RS06115;product=glutamine ABC transporter ATP-binding protein GlnQ;pseudo=true;transl_table=11 NZ_CPUY01000005.1 RefSeq gene 11618 12922 . - . ID=gene-AD853_RS06120;Name=AD853_RS06120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS06120;old_locus_tag=ERS008462_01243 NZ_CPUY01000005.1 Protein Homology CDS 11618 12922 . - 0 ID=cds-WP_011192650.1;Parent=gene-AD853_RS06120;Dbxref=GenBank:WP_011192650.1;Name=WP_011192650.1;Ontology_term=GO:0006935,GO:0007165,GO:0004888,GO:0016020,GO:0098561;gbkey=CDS;go_component=membrane|0016020||IEA,methyl accepting chemotaxis protein complex|0098561||IEA;go_function=transmembrane signaling receptor activity|0004888||IEA;go_process=chemotaxis|0006935||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192650.1;locus_tag=AD853_RS06120;product=methyl-accepting chemotaxis protein;protein_id=WP_011192650.1;transl_table=11 NZ_CPUY01000005.1 RefSeq gene 13379 13645 . - . ID=gene-AD853_RS22050;Name=AD853_RS22050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS22050 NZ_CPUY01000005.1 Protein Homology CDS 13379 13645 . - 0 ID=cds-WP_011192651.1;Parent=gene-AD853_RS22050;Dbxref=GenBank:WP_011192651.1;Name=WP_011192651.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192651.1;locus_tag=AD853_RS22050;product=hypothetical protein;protein_id=WP_011192651.1;transl_table=11 NZ_CPUY01000005.1 RefSeq gene 13709 14674 . - . ID=gene-AD853_RS06125;Name=rlmF;gbkey=Gene;gene=rlmF;gene_biotype=protein_coding;locus_tag=AD853_RS06125;old_locus_tag=ERS008462_01244 NZ_CPUY01000005.1 Protein Homology CDS 13709 14674 . - 0 ID=cds-WP_038835575.1;Parent=gene-AD853_RS06125;Dbxref=GenBank:WP_038835575.1;Name=WP_038835575.1;Ontology_term=GO:0006364,GO:0008988;gbkey=CDS;gene=rlmF;go_function=rRNA (adenine-N6-)-methyltransferase activity|0008988||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012303944.1;locus_tag=AD853_RS06125;product=23S rRNA (adenine(1618)-N(6))-methyltransferase RlmF;protein_id=WP_038835575.1;transl_table=11 NZ_CPUY01000005.1 RefSeq gene 15007 15267 . + . ID=gene-AD853_RS06130;Name=bhsA;gbkey=Gene;gene=bhsA;gene_biotype=protein_coding;locus_tag=AD853_RS06130;old_locus_tag=ERS008462_01245 NZ_CPUY01000005.1 Protein Homology CDS 15007 15267 . + 0 ID=cds-WP_038825331.1;Parent=gene-AD853_RS06130;Dbxref=GenBank:WP_038825331.1;Name=WP_038825331.1;Ontology_term=GO:0006950,GO:0046688;gbkey=CDS;gene=bhsA;go_process=response to stress|0006950||IEA,response to copper ion|0046688||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210240.1;locus_tag=AD853_RS06130;product=multiple stress resistance protein BhsA;protein_id=WP_038825331.1;transl_table=11 NZ_CPUY01000005.1 RefSeq gene 15649 16608 . - . ID=gene-AD853_RS06135;Name=ybiB;gbkey=Gene;gene=ybiB;gene_biotype=protein_coding;locus_tag=AD853_RS06135;old_locus_tag=ERS008462_01246 NZ_CPUY01000005.1 Protein Homology CDS 15649 16608 . - 0 ID=cds-WP_011192652.1;Parent=gene-AD853_RS06135;Dbxref=GenBank:WP_011192652.1;Name=WP_011192652.1;gbkey=CDS;gene=ybiB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012413801.1;locus_tag=AD853_RS06135;product=DNA-binding protein YbiB;protein_id=WP_011192652.1;transl_table=11 NZ_CPUY01000005.1 RefSeq gene 16674 18089 . - . ID=gene-AD853_RS06140;Name=menE;gbkey=Gene;gene=menE;gene_biotype=protein_coding;locus_tag=AD853_RS06140;old_locus_tag=ERS008462_01247 NZ_CPUY01000005.1 Protein Homology CDS 16674 18089 . - 0 ID=cds-WP_038824897.1;Parent=gene-AD853_RS06140;Dbxref=GenBank:WP_038824897.1;Name=WP_038824897.1;Ontology_term=GO:0009234,GO:0005524,GO:0008756;gbkey=CDS;gene=menE;go_function=ATP binding|0005524||IEA,o-succinylbenzoate-CoA ligase activity|0008756||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016598113.1;locus_tag=AD853_RS06140;product=o-succinylbenzoate--CoA ligase;protein_id=WP_038824897.1;transl_table=11 NZ_CPUY01000005.1 RefSeq gene 18077 19048 . - . ID=gene-AD853_RS06145;Name=menC;gbkey=Gene;gene=menC;gene_biotype=protein_coding;locus_tag=AD853_RS06145;old_locus_tag=ERS008462_01248 NZ_CPUY01000005.1 Protein Homology CDS 18077 19048 . - 0 ID=cds-WP_038824900.1;Parent=gene-AD853_RS06145;Dbxref=GenBank:WP_038824900.1;Name=WP_038824900.1;Ontology_term=GO:0009234,GO:0000287,GO:0016836;gbkey=CDS;gene=menC;go_function=magnesium ion binding|0000287||IEA,hydro-lyase activity|0016836||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210244.1;locus_tag=AD853_RS06145;product=o-succinylbenzoate synthase;protein_id=WP_038824900.1;transl_table=11 NZ_CPUY01000005.1 RefSeq gene 19048 19905 . - . ID=gene-AD853_RS06150;Name=menB;gbkey=Gene;gene=menB;gene_biotype=protein_coding;locus_tag=AD853_RS06150;old_locus_tag=ERS008462_01249 NZ_CPUY01000005.1 Protein Homology CDS 19048 19905 . - 0 ID=cds-WP_002210245.1;Parent=gene-AD853_RS06150;Dbxref=GenBank:WP_002210245.1;Name=WP_002210245.1;Ontology_term=GO:0009234,GO:0008935;gbkey=CDS;gene=menB;go_function=1%2C4-dihydroxy-2-naphthoyl-CoA synthase activity|0008935||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001641973.1;locus_tag=AD853_RS06150;product=1%2C4-dihydroxy-2-naphthoyl-CoA synthase;protein_id=WP_002210245.1;transl_table=11 NZ_CPUY01000005.1 RefSeq gene 19919 20737 . - . ID=gene-AD853_RS06155;Name=menH;gbkey=Gene;gene=menH;gene_biotype=protein_coding;locus_tag=AD853_RS06155;old_locus_tag=ERS008462_01250 NZ_CPUY01000005.1 Protein Homology CDS 19919 20737 . - 0 ID=cds-WP_011192655.1;Parent=gene-AD853_RS06155;Dbxref=GenBank:WP_011192655.1;Name=WP_011192655.1;Ontology_term=GO:0009234,GO:0070205;gbkey=CDS;gene=menH;go_function=2-succinyl-6-hydroxy-2%2C4-cyclohexadiene-1-carboxylate synthase activity|0070205||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012413804.1;locus_tag=AD853_RS06155;product=2-succinyl-6-hydroxy-2%2C4-cyclohexadiene-1-carboxylate synthase;protein_id=WP_011192655.1;transl_table=11 NZ_CPUY01000005.1 RefSeq gene 20734 22437 . - . ID=gene-AD853_RS06160;Name=menD;gbkey=Gene;gene=menD;gene_biotype=protein_coding;locus_tag=AD853_RS06160;old_locus_tag=ERS008462_01251 NZ_CPUY01000005.1 Protein Homology CDS 20734 22437 . - 0 ID=cds-WP_038824901.1;Parent=gene-AD853_RS06160;Dbxref=GenBank:WP_038824901.1;Name=WP_038824901.1;Ontology_term=GO:0009234,GO:0030976,GO:0070204;gbkey=CDS;gene=menD;go_function=thiamine pyrophosphate binding|0030976||IEA,2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase activity|0070204||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012413805.1;locus_tag=AD853_RS06160;product=2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase;protein_id=WP_038824901.1;transl_table=11 NZ_CPUY01000005.1 RefSeq gene 22665 24032 . - . ID=gene-AD853_RS06165;Name=menF;gbkey=Gene;gene=menF;gene_biotype=protein_coding;locus_tag=AD853_RS06165;old_locus_tag=ERS008462_01252 NZ_CPUY01000005.1 Protein Homology CDS 22665 24032 . - 0 ID=cds-WP_011192657.1;Parent=gene-AD853_RS06165;Dbxref=GenBank:WP_011192657.1;Name=WP_011192657.1;Ontology_term=GO:0008909;gbkey=CDS;gene=menF;go_function=isochorismate synthase activity|0008909||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192657.1;locus_tag=AD853_RS06165;product=isochorismate synthase MenF;protein_id=WP_011192657.1;transl_table=11 NZ_CPUY01000005.1 RefSeq gene 24544 25188 . - . ID=gene-AD853_RS06170;Name=AD853_RS06170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS06170;old_locus_tag=ERS008462_01253 NZ_CPUY01000005.1 Protein Homology CDS 24544 25188 . - 0 ID=cds-WP_038824903.1;Parent=gene-AD853_RS06170;Dbxref=GenBank:WP_038824903.1;Name=WP_038824903.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210249.1;locus_tag=AD853_RS06170;product=hypothetical protein;protein_id=WP_038824903.1;transl_table=11 NZ_CPUY01000005.1 RefSeq gene 25743 26051 . - . ID=gene-AD853_RS06175;Name=AD853_RS06175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS06175;old_locus_tag=ERS008462_01254 NZ_CPUY01000005.1 Protein Homology CDS 25743 26051 . - 0 ID=cds-WP_002210251.1;Parent=gene-AD853_RS06175;Dbxref=GenBank:WP_002210251.1;Name=WP_002210251.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210251.1;locus_tag=AD853_RS06175;product=DUF883 family protein;protein_id=WP_002210251.1;transl_table=11 NZ_CPUY01000005.1 RefSeq gene 26981 28837 . - . ID=gene-AD853_RS06190;Name=edd;gbkey=Gene;gene=edd;gene_biotype=protein_coding;locus_tag=AD853_RS06190;old_locus_tag=ERS008462_01256 NZ_CPUY01000005.1 Protein Homology CDS 26981 28837 . - 0 ID=cds-WP_012303937.1;Parent=gene-AD853_RS06190;Dbxref=GenBank:WP_012303937.1;Name=WP_012303937.1;Ontology_term=GO:0009255,GO:0004456;gbkey=CDS;gene=edd;go_function=phosphogluconate dehydratase activity|0004456||IEA;go_process=Entner-Doudoroff pathway through 6-phosphogluconate|0009255||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012104912.1;locus_tag=AD853_RS06190;product=phosphogluconate dehydratase;protein_id=WP_012303937.1;transl_table=11 NZ_CPUY01000005.1 RefSeq gene 28847 29362 . - . ID=gene-AD853_RS06195;Name=AD853_RS06195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS06195;old_locus_tag=ERS008462_01257 NZ_CPUY01000005.1 Protein Homology CDS 28847 29362 . - 0 ID=cds-WP_038825146.1;Parent=gene-AD853_RS06195;Dbxref=GenBank:WP_038825146.1;Name=WP_038825146.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192659.1;locus_tag=AD853_RS06195;product=heme-degrading domain-containing protein;protein_id=WP_038825146.1;transl_table=11 NZ_CPUY01000005.1 RefSeq gene 29392 30708 . - . ID=gene-AD853_RS06200;Name=AD853_RS06200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS06200;old_locus_tag=ERS008462_01258 NZ_CPUY01000005.1 Protein Homology CDS 29392 30708 . - 0 ID=cds-WP_011192660.1;Parent=gene-AD853_RS06200;Dbxref=GenBank:WP_011192660.1;Name=WP_011192660.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002229930.1;locus_tag=AD853_RS06200;product=MFS transporter;protein_id=WP_011192660.1;transl_table=11 NZ_CPUY01000005.1 RefSeq gene 31071 32021 . - . ID=gene-AD853_RS06205;Name=AD853_RS06205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS06205;old_locus_tag=ERS008462_01259 NZ_CPUY01000005.1 Protein Homology CDS 31071 32021 . - 0 ID=cds-WP_050124576.1;Parent=gene-AD853_RS06205;Dbxref=GenBank:WP_050124576.1;Name=WP_050124576.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210257.1;locus_tag=AD853_RS06205;product=2-hydroxyacid dehydrogenase;protein_id=WP_050124576.1;transl_table=11 NZ_CPUY01000005.1 RefSeq gene 32484 33476 . - . ID=gene-AD853_RS06215;Name=AD853_RS06215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS06215;old_locus_tag=ERS008462_01260 NZ_CPUY01000005.1 Protein Homology CDS 32484 33476 . - 0 ID=cds-WP_038825143.1;Parent=gene-AD853_RS06215;Dbxref=GenBank:WP_038825143.1;Name=WP_038825143.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210260.1;locus_tag=AD853_RS06215;product=substrate-binding domain-containing protein;protein_id=WP_038825143.1;transl_table=11 NZ_CPUY01000005.1 RefSeq gene 33945 35228 . + . ID=gene-AD853_RS06220;Name=AD853_RS06220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS06220;old_locus_tag=ERS008462_01261 NZ_CPUY01000005.1 Protein Homology CDS 33945 35228 . + 0 ID=cds-WP_012104908.1;Parent=gene-AD853_RS06220;Dbxref=GenBank:WP_012104908.1;Name=WP_012104908.1;Ontology_term=GO:0005975,GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012104908.1;locus_tag=AD853_RS06220;product=glycoside hydrolase family 10 protein;protein_id=WP_012104908.1;transl_table=11 NZ_CPUY01000005.1 RefSeq gene 35987 36751 . + . ID=gene-AD853_RS06225;Name=idnO;gbkey=Gene;gene=idnO;gene_biotype=protein_coding;locus_tag=AD853_RS06225;old_locus_tag=ERS008462_01262 NZ_CPUY01000005.1 Protein Homology CDS 35987 36751 . + 0 ID=cds-WP_011192664.1;Parent=gene-AD853_RS06225;Dbxref=GenBank:WP_011192664.1;Name=WP_011192664.1;gbkey=CDS;gene=idnO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418687.1;locus_tag=AD853_RS06225;product=gluconate 5-dehydrogenase;protein_id=WP_011192664.1;transl_table=11 NZ_CPUY01000005.1 RefSeq gene 36800 37336 . + . ID=gene-AD853_RS06230;Name=AD853_RS06230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS06230;old_locus_tag=ERS008462_01263 NZ_CPUY01000005.1 Protein Homology CDS 36800 37336 . + 0 ID=cds-WP_002210265.1;Parent=gene-AD853_RS06230;Dbxref=GenBank:WP_002210265.1;Name=WP_002210265.1;Ontology_term=GO:0046177,GO:0005524,GO:0046316;gbkey=CDS;go_function=ATP binding|0005524||IEA,gluconokinase activity|0046316||IEA;go_process=obsolete D-gluconate catabolic process|0046177||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210265.1;locus_tag=AD853_RS06230;product=gluconokinase;protein_id=WP_002210265.1;transl_table=11 NZ_CPUY01000005.1 RefSeq gene 37414 37881 . + . ID=gene-AD853_RS06235;Name=AD853_RS06235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS06235;old_locus_tag=ERS008462_01264 NZ_CPUY01000005.1 Protein Homology CDS 37414 37881 . + 0 ID=cds-WP_002210266.1;Parent=gene-AD853_RS06235;Dbxref=GenBank:WP_002210266.1;Name=WP_002210266.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019082026.1;locus_tag=AD853_RS06235;product=NanQ anomerase/TabA/YiaL family protein;protein_id=WP_002210266.1;transl_table=11 NZ_CPUY01000005.1 RefSeq gene 38186 39379 . - . ID=gene-AD853_RS06240;Name=AD853_RS06240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS06240;old_locus_tag=ERS008462_01265 NZ_CPUY01000005.1 Protein Homology CDS 38186 39379 . - 0 ID=cds-WP_012104903.1;Parent=gene-AD853_RS06240;Dbxref=GenBank:WP_012104903.1;Name=WP_012104903.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210267.1;locus_tag=AD853_RS06240;product=hypothetical protein;protein_id=WP_012104903.1;transl_table=11 NZ_CPUY01000005.1 RefSeq gene 39615 41078 . - . ID=gene-AD853_RS06245;Name=nuoN;gbkey=Gene;gene=nuoN;gene_biotype=protein_coding;locus_tag=AD853_RS06245;old_locus_tag=ERS008462_01266 NZ_CPUY01000005.1 Protein Homology CDS 39615 41078 . - 0 ID=cds-WP_002210268.1;Parent=gene-AD853_RS06245;Dbxref=GenBank:WP_002210268.1;Name=WP_002210268.1;Ontology_term=GO:0008137;gbkey=CDS;gene=nuoN;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011815945.1;locus_tag=AD853_RS06245;product=NADH-quinone oxidoreductase subunit NuoN;protein_id=WP_002210268.1;transl_table=11 NZ_CPUY01000005.1 RefSeq gene 41085 42617 . - . ID=gene-AD853_RS06250;Name=nuoM;gbkey=Gene;gene=nuoM;gene_biotype=protein_coding;locus_tag=AD853_RS06250;old_locus_tag=ERS008462_01267 NZ_CPUY01000005.1 Protein Homology CDS 41085 42617 . - 0 ID=cds-WP_002210269.1;Parent=gene-AD853_RS06250;Dbxref=GenBank:WP_002210269.1;Name=WP_002210269.1;Ontology_term=GO:0042773,GO:0008137;gbkey=CDS;gene=nuoM;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228034.1;locus_tag=AD853_RS06250;product=NADH-quinone oxidoreductase subunit M;protein_id=WP_002210269.1;transl_table=11 NZ_CPUY01000005.1 RefSeq gene 42657 44501 . - . ID=gene-AD853_RS06255;Name=nuoL;gbkey=Gene;gene=nuoL;gene_biotype=protein_coding;locus_tag=AD853_RS06255;old_locus_tag=ERS008462_01268 NZ_CPUY01000005.1 Protein Homology CDS 42657 44501 . - 0 ID=cds-WP_011192667.1;Parent=gene-AD853_RS06255;Dbxref=GenBank:WP_011192667.1;Name=WP_011192667.1;Ontology_term=GO:0042773,GO:0008137;gbkey=CDS;gene=nuoL;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210270.1;locus_tag=AD853_RS06255;product=NADH-quinone oxidoreductase subunit L;protein_id=WP_011192667.1;transl_table=11 NZ_CPUY01000005.1 RefSeq gene 44498 44800 . - . ID=gene-AD853_RS06260;Name=nuoK;gbkey=Gene;gene=nuoK;gene_biotype=protein_coding;locus_tag=AD853_RS06260;old_locus_tag=ERS008462_01269 NZ_CPUY01000005.1 Protein Homology CDS 44498 44800 . - 0 ID=cds-WP_002210271.1;Parent=gene-AD853_RS06260;Dbxref=GenBank:WP_002210271.1;Name=WP_002210271.1;Ontology_term=GO:0042773,GO:0016651;gbkey=CDS;gene=nuoK;go_function=oxidoreductase activity%2C acting on NAD(P)H|0016651||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006683663.1;locus_tag=AD853_RS06260;product=NADH-quinone oxidoreductase subunit NuoK;protein_id=WP_002210271.1;transl_table=11 NZ_CPUY01000005.1 RefSeq gene 44797 45342 . - . ID=gene-AD853_RS06265;Name=nuoJ;gbkey=Gene;gene=nuoJ;gene_biotype=protein_coding;locus_tag=AD853_RS06265;old_locus_tag=ERS008462_01270 NZ_CPUY01000005.1 Protein Homology CDS 44797 45342 . - 0 ID=cds-WP_002210272.1;Parent=gene-AD853_RS06265;Dbxref=GenBank:WP_002210272.1;Name=WP_002210272.1;Ontology_term=GO:0008137;gbkey=CDS;gene=nuoJ;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013650177.1;locus_tag=AD853_RS06265;product=NADH-quinone oxidoreductase subunit J;protein_id=WP_002210272.1;transl_table=11 NZ_CPUY01000005.1 RefSeq gene 45355 45897 . - . ID=gene-AD853_RS06270;Name=nuoI;gbkey=Gene;gene=nuoI;gene_biotype=protein_coding;locus_tag=AD853_RS06270;old_locus_tag=ERS008462_01271 NZ_CPUY01000005.1 Protein Homology CDS 45355 45897 . - 0 ID=cds-WP_002210273.1;Parent=gene-AD853_RS06270;Dbxref=GenBank:WP_002210273.1;Name=WP_002210273.1;Ontology_term=GO:0016651,GO:0051539,GO:0016020;gbkey=CDS;gene=nuoI;go_component=membrane|0016020||IEA;go_function=oxidoreductase activity%2C acting on NAD(P)H|0016651||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015959823.1;locus_tag=AD853_RS06270;product=NADH-quinone oxidoreductase subunit NuoI;protein_id=WP_002210273.1;transl_table=11 NZ_CPUY01000005.1 RefSeq gene 45912 46889 . - . ID=gene-AD853_RS06275;Name=nuoH;gbkey=Gene;gene=nuoH;gene_biotype=protein_coding;locus_tag=AD853_RS06275;old_locus_tag=ERS008462_01272 NZ_CPUY01000005.1 Protein Homology CDS 45912 46889 . - 0 ID=cds-WP_002210274.1;Parent=gene-AD853_RS06275;Dbxref=GenBank:WP_002210274.1;Name=WP_002210274.1;gbkey=CDS;gene=nuoH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875065.1;locus_tag=AD853_RS06275;product=NADH-quinone oxidoreductase subunit NuoH;protein_id=WP_002210274.1;transl_table=11 NZ_CPUY01000005.1 RefSeq gene 46886 49630 . - . ID=gene-AD853_RS06280;Name=nuoG;gbkey=Gene;gene=nuoG;gene_biotype=protein_coding;locus_tag=AD853_RS06280;old_locus_tag=ERS008462_01273 NZ_CPUY01000005.1 Protein Homology CDS 46886 49630 . - 0 ID=cds-WP_038824421.1;Parent=gene-AD853_RS06280;Dbxref=GenBank:WP_038824421.1;Name=WP_038824421.1;Ontology_term=GO:0006120,GO:0050136,GO:0051536;gbkey=CDS;gene=nuoG;go_function=NADH dehydrogenase (quinone) (non-electrogenic) activity|0050136||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=mitochondrial electron transport%2C NADH to ubiquinone|0006120||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192668.1;locus_tag=AD853_RS06280;product=NADH-quinone oxidoreductase subunit NuoG;protein_id=WP_038824421.1;transl_table=11 NZ_CPUY01000005.1 RefSeq gene 49717 51102 . - . ID=gene-AD853_RS06285;Name=nuoF;gbkey=Gene;gene=nuoF;gene_biotype=protein_coding;locus_tag=AD853_RS06285;old_locus_tag=ERS008462_01275 NZ_CPUY01000005.1 Protein Homology CDS 49717 51102 . - 0 ID=cds-WP_072080772.1;Parent=gene-AD853_RS06285;Dbxref=GenBank:WP_072080772.1;Name=WP_072080772.1;Ontology_term=GO:0008137,GO:0051539;gbkey=CDS;gene=nuoF;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210276.1;locus_tag=AD853_RS06285;product=NADH-quinone oxidoreductase subunit NuoF;protein_id=WP_072080772.1;transl_table=11 NZ_CPUY01000005.1 RefSeq pseudogene 51099 51598 . - . ID=gene-AD853_RS06290;Name=nuoE;gbkey=Gene;gene=nuoE;gene_biotype=pseudogene;locus_tag=AD853_RS06290;old_locus_tag=ERS008462_01276;pseudo=true NZ_CPUY01000005.1 Protein Homology CDS 51099 51598 . - 0 ID=cds-AD853_RS06290;Parent=gene-AD853_RS06290;Note=frameshifted;Ontology_term=GO:0016491;gbkey=CDS;gene=nuoE;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228042.1;locus_tag=AD853_RS06290;product=NADH-quinone oxidoreductase subunit NuoE;pseudo=true;transl_table=11 NZ_CPUY01000005.1 RefSeq gene 51665 53461 . - . ID=gene-AD853_RS06295;Name=nuoC;gbkey=Gene;gene=nuoC;gene_biotype=protein_coding;locus_tag=AD853_RS06295;old_locus_tag=ERS008462_01277 NZ_CPUY01000005.1 Protein Homology CDS 51665 53461 . - 0 ID=cds-WP_002210277.1;Parent=gene-AD853_RS06295;Dbxref=GenBank:WP_002210277.1;Name=WP_002210277.1;Ontology_term=GO:0048038,GO:0050136,GO:0051287,GO:0030964;gbkey=CDS;gene=nuoC;go_component=NADH dehydrogenase complex|0030964||IEA;go_function=quinone binding|0048038||IEA,NADH dehydrogenase (quinone) (non-electrogenic) activity|0050136||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005159214.1;locus_tag=AD853_RS06295;product=NADH-quinone oxidoreductase subunit C/D;protein_id=WP_002210277.1;transl_table=11 NZ_CPUY01000005.1 RefSeq gene 53604 54281 . - . ID=gene-AD853_RS06300;Name=AD853_RS06300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS06300;old_locus_tag=ERS008462_01278 NZ_CPUY01000005.1 Protein Homology CDS 53604 54281 . - 0 ID=cds-WP_002210278.1;Parent=gene-AD853_RS06300;Dbxref=GenBank:WP_002210278.1;Name=WP_002210278.1;Ontology_term=GO:0008137,GO:0016655,GO:0048038,GO:0051539,GO:0005886,GO:0045271;gbkey=CDS;go_component=plasma membrane|0005886||IEA,respiratory chain complex I|0045271||IEA;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA,oxidoreductase activity%2C acting on NAD(P)H%2C quinone or similar compound as acceptor|0016655||IEA,quinone binding|0048038||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461269.1;locus_tag=AD853_RS06300;product=NuoB/complex I 20 kDa subunit family protein;protein_id=WP_002210278.1;transl_table=11 NZ_CPUY01000005.1 RefSeq gene 54383 54883 . - . ID=gene-AD853_RS06305;Name=AD853_RS06305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS06305;old_locus_tag=ERS008462_01279 NZ_CPUY01000005.1 Protein Homology CDS 54383 54883 . - 0 ID=cds-WP_002210279.1;Parent=gene-AD853_RS06305;Dbxref=GenBank:WP_002210279.1;Name=WP_002210279.1;Ontology_term=GO:0016655,GO:0048038,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=oxidoreductase activity%2C acting on NAD(P)H%2C quinone or similar compound as acceptor|0016655||IEA,quinone binding|0048038||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012413807.1;locus_tag=AD853_RS06305;product=NADH-quinone oxidoreductase subunit A;protein_id=WP_002210279.1;transl_table=11 NZ_CPUY01000005.1 RefSeq gene 55566 56510 . - . ID=gene-AD853_RS06310;Name=rovM;gbkey=Gene;gene=rovM;gene_biotype=protein_coding;locus_tag=AD853_RS06310;old_locus_tag=ERS008462_01280 NZ_CPUY01000005.1 Protein Homology CDS 55566 56510 . - 0 ID=cds-WP_050124577.1;Parent=gene-AD853_RS06310;Dbxref=GenBank:WP_050124577.1;Name=WP_050124577.1;gbkey=CDS;gene=rovM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005171734.1;locus_tag=AD853_RS06310;product=virulence transcriptional regulator RovM;protein_id=WP_050124577.1;transl_table=11 NZ_CPUY01000005.1 RefSeq gene 57365 58579 . + . ID=gene-AD853_RS06320;Name=AD853_RS06320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS06320;old_locus_tag=ERS008462_01281 NZ_CPUY01000005.1 Protein Homology CDS 57365 58579 . + 0 ID=cds-WP_011192671.1;Parent=gene-AD853_RS06320;Dbxref=GenBank:WP_011192671.1;Name=WP_011192671.1;Ontology_term=GO:0009058,GO:0003824,GO:0030170;gbkey=CDS;go_function=catalytic activity|0003824||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013365445.1;locus_tag=AD853_RS06320;product=pyridoxal phosphate-dependent aminotransferase;protein_id=WP_011192671.1;transl_table=11 NZ_CPUY01000005.1 RefSeq gene 58730 59323 . + . ID=gene-AD853_RS06325;Name=yfbR;gbkey=Gene;gene=yfbR;gene_biotype=protein_coding;locus_tag=AD853_RS06325;old_locus_tag=ERS008462_01282 NZ_CPUY01000005.1 Protein Homology CDS 58730 59323 . + 0 ID=cds-WP_002210283.1;Parent=gene-AD853_RS06325;Dbxref=GenBank:WP_002210283.1;Name=WP_002210283.1;Ontology_term=GO:0002953;gbkey=CDS;gene=yfbR;go_function=5'-deoxynucleotidase activity|0002953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013650180.1;locus_tag=AD853_RS06325;product=5'-deoxynucleotidase;protein_id=WP_002210283.1;transl_table=11 NZ_CPUY01000005.1 RefSeq gene 59370 59612 . - . ID=gene-AD853_RS06330;Name=AD853_RS06330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS06330;old_locus_tag=ERS008462_01283 NZ_CPUY01000005.1 Protein Homology CDS 59370 59612 . - 0 ID=cds-WP_072080773.1;Parent=gene-AD853_RS06330;Dbxref=GenBank:WP_072080773.1;Name=WP_072080773.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012413809.1;locus_tag=AD853_RS06330;product=hypothetical protein;protein_id=WP_072080773.1;transl_table=11 NZ_CPUY01000005.1 RefSeq gene 60031 61863 . - . ID=gene-AD853_RS06335;Name=AD853_RS06335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS06335;old_locus_tag=ERS008462_01284 NZ_CPUY01000005.1 Protein Homology CDS 60031 61863 . - 0 ID=cds-WP_012303929.1;Parent=gene-AD853_RS06335;Dbxref=GenBank:WP_012303929.1;Name=WP_012303929.1;Ontology_term=GO:0008324;gbkey=CDS;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005276412.1;locus_tag=AD853_RS06335;product=SLC13 family permease;protein_id=WP_012303929.1;transl_table=11 NZ_CPUY01000005.1 RefSeq gene 62155 62811 . - . ID=gene-AD853_RS06340;Name=AD853_RS06340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS06340;old_locus_tag=ERS008462_01285 NZ_CPUY01000005.1 Protein Homology CDS 62155 62811 . - 0 ID=cds-WP_011192675.1;Parent=gene-AD853_RS06340;Dbxref=GenBank:WP_011192675.1;Name=WP_011192675.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012104894.1;locus_tag=AD853_RS06340;product=sugar phosphatase;protein_id=WP_011192675.1;transl_table=11 NZ_CPUY01000005.1 RefSeq gene 62976 63470 . - . ID=gene-AD853_RS06345;Name=AD853_RS06345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS06345;old_locus_tag=ERS008462_01286 NZ_CPUY01000005.1 Protein Homology CDS 62976 63470 . - 0 ID=cds-WP_002210286.1;Parent=gene-AD853_RS06345;Dbxref=GenBank:WP_002210286.1;Name=WP_002210286.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461277.1;locus_tag=AD853_RS06345;product=YfbU family protein;protein_id=WP_002210286.1;transl_table=11 NZ_CPUY01000005.1 RefSeq gene 63800 64255 . - . ID=gene-AD853_RS06350;Name=yfbV;gbkey=Gene;gene=yfbV;gene_biotype=protein_coding;locus_tag=AD853_RS06350;old_locus_tag=ERS008462_01287 NZ_CPUY01000005.1 Protein Homology CDS 63800 64255 . - 0 ID=cds-WP_011192676.1;Parent=gene-AD853_RS06350;Dbxref=GenBank:WP_011192676.1;Name=WP_011192676.1;gbkey=CDS;gene=yfbV;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012146029.1;locus_tag=AD853_RS06350;product=terminus macrodomain insulation protein YfbV;protein_id=WP_011192676.1;transl_table=11 NZ_CPUY01000005.1 RefSeq gene 64677 65879 . + . ID=gene-AD853_RS06360;Name=ackA;gbkey=Gene;gene=ackA;gene_biotype=protein_coding;locus_tag=AD853_RS06360;old_locus_tag=ERS008462_01288 NZ_CPUY01000005.1 Protein Homology CDS 64677 65879 . + 0 ID=cds-WP_011192678.1;Parent=gene-AD853_RS06360;Dbxref=GenBank:WP_011192678.1;Name=WP_011192678.1;gbkey=CDS;gene=ackA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129491.1;locus_tag=AD853_RS06360;product=acetate kinase;protein_id=WP_011192678.1;transl_table=11 NZ_CPUY01000005.1 RefSeq gene 66063 68201 . + . ID=gene-AD853_RS06365;Name=pta;gbkey=Gene;gene=pta;gene_biotype=protein_coding;locus_tag=AD853_RS06365;old_locus_tag=ERS008462_01289 NZ_CPUY01000005.1 Protein Homology CDS 66063 68201 . + 0 ID=cds-WP_002265141.1;Parent=gene-AD853_RS06365;Dbxref=GenBank:WP_002265141.1;Name=WP_002265141.1;Ontology_term=GO:0016407;gbkey=CDS;gene=pta;go_function=acetyltransferase activity|0016407||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002265141.1;locus_tag=AD853_RS06365;product=phosphate acetyltransferase;protein_id=WP_002265141.1;transl_table=11 NZ_CPUY01000005.1 RefSeq pseudogene 68217 68285 . - . ID=gene-AD853_RS22060;Name=AD853_RS22060;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD853_RS22060;partial=true;pseudo=true;start_range=.,68217 NZ_CPUY01000005.1 Protein Homology CDS 68217 68285 . - 0 ID=cds-AD853_RS22060;Parent=gene-AD853_RS22060;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002224869.1;locus_tag=AD853_RS22060;partial=true;product=gluconate 5-dehydrogenase;pseudo=true;start_range=.,68217;transl_table=11 NZ_CPUY01000005.1 RefSeq gene 68467 69501 . - . ID=gene-AD853_RS06370;Name=AD853_RS06370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS06370;old_locus_tag=ERS008462_01290 NZ_CPUY01000005.1 Protein Homology CDS 68467 69501 . - 0 ID=cds-WP_002216059.1;Parent=gene-AD853_RS06370;Dbxref=GenBank:WP_002216059.1;Name=WP_002216059.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192679.1;locus_tag=AD853_RS06370;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_002216059.1;transl_table=11 NZ_CPUY01000005.1 RefSeq gene 69868 70311 . + . ID=gene-AD853_RS06375;Name=AD853_RS06375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS06375;old_locus_tag=ERS008462_01291 NZ_CPUY01000005.1 Protein Homology CDS 69868 70311 . + 0 ID=cds-WP_011192680.1;Parent=gene-AD853_RS06375;Dbxref=GenBank:WP_011192680.1;Name=WP_011192680.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:0016301,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_function=kinase activity|0016301||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192680.1;locus_tag=AD853_RS06375;product=PTS sugar transporter subunit IIA;protein_id=WP_011192680.1;transl_table=11 NZ_CPUY01000005.1 RefSeq gene 70480 70767 . + . ID=gene-AD853_RS06380;Name=AD853_RS06380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS06380;old_locus_tag=ERS008462_01292 NZ_CPUY01000005.1 Protein Homology CDS 70480 70767 . + 0 ID=cds-WP_002264679.1;Parent=gene-AD853_RS06380;Dbxref=GenBank:WP_002264679.1;Name=WP_002264679.1;Ontology_term=GO:0008643,GO:0009401,GO:0008982;gbkey=CDS;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004717867.1;locus_tag=AD853_RS06380;product=PTS sugar transporter subunit IIB;protein_id=WP_002264679.1;transl_table=11 NZ_CPUY01000005.1 RefSeq gene 70780 72036 . + . ID=gene-AD853_RS06385;Name=AD853_RS06385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS06385;old_locus_tag=ERS008462_01293 NZ_CPUY01000005.1 Protein Homology CDS 70780 72036 . + 0 ID=cds-WP_002222248.1;Parent=gene-AD853_RS06385;Dbxref=GenBank:WP_002222248.1;Name=WP_002222248.1;Ontology_term=GO:0009401;gbkey=CDS;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011815933.1;locus_tag=AD853_RS06385;product=PTS ascorbate transporter subunit IIC;protein_id=WP_002222248.1;transl_table=11 NZ_CPUY01000005.1 RefSeq gene 72153 72701 . - . ID=gene-AD853_RS06390;Name=yfcD;gbkey=Gene;gene=yfcD;gene_biotype=protein_coding;locus_tag=AD853_RS06390;old_locus_tag=ERS008462_01294 NZ_CPUY01000005.1 Protein Homology CDS 72153 72701 . - 0 ID=cds-WP_038824027.1;Parent=gene-AD853_RS06390;Dbxref=GenBank:WP_038824027.1;Name=WP_038824027.1;Ontology_term=GO:0016817;gbkey=CDS;gene=yfcD;go_function=hydrolase activity%2C acting on acid anhydrides|0016817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209742.1;locus_tag=AD853_RS06390;product=NUDIX hydrolase YfcD;protein_id=WP_038824027.1;transl_table=11 NZ_CPUY01000005.1 RefSeq gene 72923 73474 . - . ID=gene-AD853_RS06395;Name=yfcE;gbkey=Gene;gene=yfcE;gene_biotype=protein_coding;locus_tag=AD853_RS06395;old_locus_tag=ERS008462_01295 NZ_CPUY01000005.1 Protein Homology CDS 72923 73474 . - 0 ID=cds-WP_050124578.1;Parent=gene-AD853_RS06395;Dbxref=GenBank:WP_050124578.1;Name=WP_050124578.1;gbkey=CDS;gene=yfcE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004714843.1;locus_tag=AD853_RS06395;product=phosphodiesterase;protein_id=WP_050124578.1;transl_table=11 NZ_CPUY01000005.1 RefSeq gene 73662 74354 . - . ID=gene-AD853_RS06400;Name=AD853_RS06400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS06400;old_locus_tag=ERS008462_01296 NZ_CPUY01000005.1 Protein Homology CDS 73662 74354 . - 0 ID=cds-WP_012303928.1;Parent=gene-AD853_RS06400;Dbxref=GenBank:WP_012303928.1;Name=WP_012303928.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012303928.1;locus_tag=AD853_RS06400;product=EAL domain-containing protein;protein_id=WP_012303928.1;transl_table=11 NZ_CPUY01000005.1 RefSeq gene 74708 75616 . + . ID=gene-AD853_RS06405;Name=AD853_RS06405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS06405;old_locus_tag=ERS008462_01297 NZ_CPUY01000005.1 Protein Homology CDS 74708 75616 . + 0 ID=cds-WP_002209739.1;Parent=gene-AD853_RS06405;Dbxref=GenBank:WP_002209739.1;Name=WP_002209739.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209739.1;locus_tag=AD853_RS06405;product=TIGR01777 family oxidoreductase;protein_id=WP_002209739.1;transl_table=11 NZ_CPUY01000005.1 RefSeq gene 75740 76537 . - . ID=gene-AD853_RS06410;Name=hisP;gbkey=Gene;gene=hisP;gene_biotype=protein_coding;locus_tag=AD853_RS06410;old_locus_tag=ERS008462_01298 NZ_CPUY01000005.1 Protein Homology CDS 75740 76537 . - 0 ID=cds-WP_002209738.1;Parent=gene-AD853_RS06410;Dbxref=GenBank:WP_002209738.1;Name=WP_002209738.1;gbkey=CDS;gene=hisP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209738.1;locus_tag=AD853_RS06410;product=histidine ABC transporter ATP-binding protein HisP;protein_id=WP_002209738.1;transl_table=11 NZ_CPUY01000005.1 RefSeq gene 76551 77267 . - . ID=gene-AD853_RS06415;Name=AD853_RS06415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS06415;old_locus_tag=ERS008462_01299 NZ_CPUY01000005.1 Protein Homology CDS 76551 77267 . - 0 ID=cds-WP_002209737.1;Parent=gene-AD853_RS06415;Dbxref=GenBank:WP_002209737.1;Name=WP_002209737.1;Ontology_term=GO:0022857,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012131463.1;locus_tag=AD853_RS06415;product=ABC transporter permease;protein_id=WP_002209737.1;transl_table=11 NZ_CPUY01000005.1 RefSeq gene 77264 77950 . - . ID=gene-AD853_RS06420;Name=AD853_RS06420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS06420;old_locus_tag=ERS008462_01300 NZ_CPUY01000005.1 Protein Homology CDS 77264 77950 . - 0 ID=cds-WP_012303927.1;Parent=gene-AD853_RS06420;Dbxref=GenBank:WP_012303927.1;Name=WP_012303927.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011815927.1;locus_tag=AD853_RS06420;product=histidine ABC transporter permease HisQ;protein_id=WP_012303927.1;transl_table=11 NZ_CPUY01000005.1 RefSeq gene 78046 78834 . - . ID=gene-AD853_RS06425;Name=hisJ;gbkey=Gene;gene=hisJ;gene_biotype=protein_coding;locus_tag=AD853_RS06425;old_locus_tag=ERS008462_01301 NZ_CPUY01000005.1 Protein Homology CDS 78046 78834 . - 0 ID=cds-WP_038824028.1;Parent=gene-AD853_RS06425;Dbxref=GenBank:WP_038824028.1;Name=WP_038824028.1;gbkey=CDS;gene=hisJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002216029.1;locus_tag=AD853_RS06425;product=histidine ABC transporter substrate-binding protein HisJ;protein_id=WP_038824028.1;transl_table=11 NZ_CPUY01000005.1 RefSeq gene 79347 79919 . - . ID=gene-AD853_RS06430;Name=AD853_RS06430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS06430;old_locus_tag=ERS008462_01302 NZ_CPUY01000005.1 Protein Homology CDS 79347 79919 . - 0 ID=cds-WP_002209734.1;Parent=gene-AD853_RS06430;Dbxref=GenBank:WP_002209734.1;Name=WP_002209734.1;Ontology_term=GO:0010181,GO:0016831,GO:0106141;gbkey=CDS;go_function=FMN binding|0010181||IEA,carboxy-lyase activity|0016831||IEA,flavin prenyltransferase activity|0106141||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209734.1;locus_tag=AD853_RS06430;product=UbiX family flavin prenyltransferase;protein_id=WP_002209734.1;transl_table=11 NZ_CPUY01000005.1 RefSeq gene 80196 81713 . - . ID=gene-AD853_RS06435;Name=purF;gbkey=Gene;gene=purF;gene_biotype=protein_coding;locus_tag=AD853_RS06435;old_locus_tag=ERS008462_01303 NZ_CPUY01000005.1 Protein Homology CDS 80196 81713 . - 0 ID=cds-WP_002209733.1;Parent=gene-AD853_RS06435;Dbxref=GenBank:WP_002209733.1;Name=WP_002209733.1;Ontology_term=GO:0009113,GO:0004044;gbkey=CDS;gene=purF;go_function=amidophosphoribosyltransferase activity|0004044||IEA;go_process=purine nucleobase biosynthetic process|0009113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006820991.1;locus_tag=AD853_RS06435;product=amidophosphoribosyltransferase;protein_id=WP_002209733.1;transl_table=11 NZ_CPUY01000005.1 RefSeq gene 81726 82235 . - . ID=gene-AD853_RS06440;Name=cvpA;gbkey=Gene;gene=cvpA;gene_biotype=protein_coding;locus_tag=AD853_RS06440;old_locus_tag=ERS008462_01304 NZ_CPUY01000005.1 Protein Homology CDS 81726 82235 . - 0 ID=cds-WP_002209732.1;Parent=gene-AD853_RS06440;Dbxref=GenBank:WP_002209732.1;Name=WP_002209732.1;gbkey=CDS;gene=cvpA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004708846.1;locus_tag=AD853_RS06440;product=colicin V production protein;protein_id=WP_002209732.1;transl_table=11 NZ_CPUY01000005.1 RefSeq gene 82516 83223 . - . ID=gene-AD853_RS06445;Name=dedD;gbkey=Gene;gene=dedD;gene_biotype=protein_coding;locus_tag=AD853_RS06445;old_locus_tag=ERS008462_01305 NZ_CPUY01000005.1 Protein Homology CDS 82516 83223 . - 0 ID=cds-WP_038824316.1;Parent=gene-AD853_RS06445;Dbxref=GenBank:WP_038824316.1;Name=WP_038824316.1;Ontology_term=GO:0032506,GO:0042834,GO:0030428;gbkey=CDS;gene=dedD;go_component=cell septum|0030428||IEA;go_function=peptidoglycan binding|0042834||IEA;go_process=cytokinetic process|0032506||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209731.1;locus_tag=AD853_RS06445;product=cell division protein DedD;protein_id=WP_038824316.1;transl_table=11 NZ_CPUY01000005.1 RefSeq gene 83343 84647 . - . ID=gene-AD853_RS06450;Name=folC;gbkey=Gene;gene=folC;gene_biotype=protein_coding;locus_tag=AD853_RS06450;old_locus_tag=ERS008462_01306 NZ_CPUY01000005.1 Protein Homology CDS 83343 84647 . - 0 ID=cds-WP_002209730.1;Parent=gene-AD853_RS06450;Dbxref=GenBank:WP_002209730.1;Name=WP_002209730.1;Ontology_term=GO:0009396,GO:0004326,GO:0005524,GO:0016874;gbkey=CDS;gene=folC;go_function=tetrahydrofolylpolyglutamate synthase activity|0004326||IEA,ATP binding|0005524||IEA,ligase activity|0016874||IEA;go_process=folic acid-containing compound biosynthetic process|0009396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012303924.1;locus_tag=AD853_RS06450;product=bifunctional tetrahydrofolate synthase/dihydrofolate synthase;protein_id=WP_002209730.1;transl_table=11 NZ_CPUY01000005.1 RefSeq gene 84896 85810 . - . ID=gene-AD853_RS06455;Name=accD;gbkey=Gene;gene=accD;gene_biotype=protein_coding;locus_tag=AD853_RS06455;old_locus_tag=ERS008462_01307 NZ_CPUY01000005.1 Protein Homology CDS 84896 85810 . - 0 ID=cds-WP_002209729.1;Parent=gene-AD853_RS06455;Dbxref=GenBank:WP_002209729.1;Name=WP_002209729.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;gene=accD;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011906305.1;locus_tag=AD853_RS06455;product=acetyl-CoA carboxylase%2C carboxyltransferase subunit beta;protein_id=WP_002209729.1;transl_table=11 NZ_CPUY01000005.1 RefSeq gene 86041 86703 . - . ID=gene-AD853_RS06460;Name=AD853_RS06460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS06460;old_locus_tag=ERS008462_01308 NZ_CPUY01000005.1 Protein Homology CDS 86041 86703 . - 0 ID=cds-WP_002209728.1;Parent=gene-AD853_RS06460;Dbxref=GenBank:WP_002209728.1;Name=WP_002209728.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005276713.1;locus_tag=AD853_RS06460;product=DedA family protein;protein_id=WP_002209728.1;transl_table=11 NZ_CPUY01000005.1 RefSeq gene 86860 87741 . - . ID=gene-AD853_RS06465;Name=truA;gbkey=Gene;gene=truA;gene_biotype=protein_coding;locus_tag=AD853_RS06465;old_locus_tag=ERS008462_01309 NZ_CPUY01000005.1 Protein Homology CDS 86860 87741 . - 0 ID=cds-WP_002209727.1;Parent=gene-AD853_RS06465;Dbxref=GenBank:WP_002209727.1;Name=WP_002209727.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;gene=truA;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209727.1;locus_tag=AD853_RS06465;product=tRNA pseudouridine(38-40) synthase TruA;protein_id=WP_002209727.1;transl_table=11 NZ_CPUY01000005.1 RefSeq gene 87741 88751 . - . ID=gene-AD853_RS06470;Name=AD853_RS06470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS06470;old_locus_tag=ERS008462_01310 NZ_CPUY01000005.1 Protein Homology CDS 87741 88751 . - 0 ID=cds-WP_038824313.1;Parent=gene-AD853_RS06470;Dbxref=GenBank:WP_038824313.1;Name=WP_038824313.1;Ontology_term=GO:0008652,GO:0016620,GO:0046983,GO:0051287;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA,protein dimerization activity|0046983||IEA,NAD binding|0051287||IEA;go_process=amino acid biosynthetic process|0008652||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209726.1;locus_tag=AD853_RS06470;product=aspartate-semialdehyde dehydrogenase;protein_id=WP_038824313.1;transl_table=11 NZ_CPUY01000005.1 RefSeq gene 88921 90048 . - . ID=gene-AD853_RS06475;Name=pdxB;gbkey=Gene;gene=pdxB;gene_biotype=protein_coding;locus_tag=AD853_RS06475;old_locus_tag=ERS008462_01311 NZ_CPUY01000005.1 Protein Homology CDS 88921 90048 . - 0 ID=cds-WP_038824312.1;Parent=gene-AD853_RS06475;Dbxref=GenBank:WP_038824312.1;Name=WP_038824312.1;Ontology_term=GO:0008615,GO:0033711,GO:0046983,GO:0051287;gbkey=CDS;gene=pdxB;go_function=4-phosphoerythronate dehydrogenase activity|0033711||IEA,protein dimerization activity|0046983||IEA,NAD binding|0051287||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005276711.1;locus_tag=AD853_RS06475;product=4-phosphoerythronate dehydrogenase PdxB;protein_id=WP_038824312.1;transl_table=11 NZ_CPUY01000005.1 RefSeq gene 90095 90880 . - . ID=gene-AD853_RS06480;Name=AD853_RS06480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS06480;old_locus_tag=ERS008462_01312 NZ_CPUY01000005.1 Protein Homology CDS 90095 90880 . - 0 ID=cds-WP_011192684.1;Parent=gene-AD853_RS06480;Dbxref=GenBank:WP_011192684.1;Name=WP_011192684.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209724.1;locus_tag=AD853_RS06480;product=AraC family transcriptional regulator;protein_id=WP_011192684.1;transl_table=11 NZ_CPUY01000005.1 RefSeq gene 91106 92023 . + . ID=gene-AD853_RS06490;Name=AD853_RS06490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS06490;old_locus_tag=ERS008462_01313 NZ_CPUY01000005.1 Protein Homology CDS 91106 92023 . + 0 ID=cds-WP_012303922.1;Parent=gene-AD853_RS06490;Dbxref=GenBank:WP_012303922.1;Name=WP_012303922.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012303922.1;locus_tag=AD853_RS06490;product=DMT family transporter;protein_id=WP_012303922.1;transl_table=11 NZ_CPUY01000005.1 RefSeq gene 92308 93345 . + . ID=gene-AD853_RS06495;Name=flk;gbkey=Gene;gene=flk;gene_biotype=protein_coding;locus_tag=AD853_RS06495;old_locus_tag=ERS008462_01314 NZ_CPUY01000005.1 Protein Homology CDS 92308 93345 . + 0 ID=cds-WP_050124579.1;Parent=gene-AD853_RS06495;Dbxref=GenBank:WP_050124579.1;Name=WP_050124579.1;Ontology_term=GO:0010468,GO:0016020;gbkey=CDS;gene=flk;go_component=membrane|0016020||IEA;go_process=regulation of gene expression|0010468||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005171873.1;locus_tag=AD853_RS06495;product=flagella biosynthesis regulator Flk;protein_id=WP_050124579.1;transl_table=11 NZ_CPUY01000005.1 RefSeq pseudogene 93444 93512 . - . ID=gene-AD853_RS22065;Name=AD853_RS22065;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD853_RS22065;partial=true;pseudo=true;start_range=.,93444 NZ_CPUY01000005.1 Protein Homology CDS 93444 93512 . - 0 ID=cds-AD853_RS22065;Parent=gene-AD853_RS22065;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002224869.1;locus_tag=AD853_RS22065;partial=true;product=gluconate 5-dehydrogenase;pseudo=true;start_range=.,93444;transl_table=11 NZ_CPUY01000005.1 RefSeq gene 93872 94402 . - . ID=gene-AD853_RS06500;Name=AD853_RS06500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS06500;old_locus_tag=ERS008462_01315 NZ_CPUY01000005.1 Protein Homology CDS 93872 94402 . - 0 ID=cds-WP_011192686.1;Parent=gene-AD853_RS06500;Dbxref=GenBank:WP_011192686.1;Name=WP_011192686.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011193076.1;locus_tag=AD853_RS06500;product=fimbrial protein;protein_id=WP_011192686.1;transl_table=11 NZ_CPUY01000005.1 RefSeq gene 95193 95885 . + . ID=gene-AD853_RS06505;Name=AD853_RS06505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS06505;old_locus_tag=ERS008462_01316 NZ_CPUY01000005.1 Protein Homology CDS 95193 95885 . + 0 ID=cds-WP_038825006.1;Parent=gene-AD853_RS06505;Dbxref=GenBank:WP_038825006.1;Name=WP_038825006.1;Ontology_term=GO:0047661;gbkey=CDS;go_function=amino-acid racemase activity|0047661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209718.1;locus_tag=AD853_RS06505;product=aspartate/glutamate racemase family protein;protein_id=WP_038825006.1;transl_table=11 NZ_CPUY01000005.1 RefSeq pseudogene 96157 96234 . + . ID=gene-AD853_RS22070;Name=AD853_RS22070;end_range=96234,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD853_RS22070;partial=true;pseudo=true NZ_CPUY01000005.1 Protein Homology CDS 96157 96234 . + 0 ID=cds-AD853_RS22070;Parent=gene-AD853_RS22070;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=96234,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002224869.1;locus_tag=AD853_RS22070;partial=true;product=gluconate 5-dehydrogenase;pseudo=true;transl_table=11 NZ_CPUY01000005.1 RefSeq gene 96293 97516 . - . ID=gene-AD853_RS06510;Name=fabB;gbkey=Gene;gene=fabB;gene_biotype=protein_coding;locus_tag=AD853_RS06510;old_locus_tag=ERS008462_01317 NZ_CPUY01000005.1 Protein Homology CDS 96293 97516 . - 0 ID=cds-WP_011192688.1;Parent=gene-AD853_RS06510;Dbxref=GenBank:WP_011192688.1;Name=WP_011192688.1;Ontology_term=GO:0006633,GO:0004315;gbkey=CDS;gene=fabB;go_function=3-oxoacyl-[acyl-carrier-protein] synthase activity|0004315||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192688.1;locus_tag=AD853_RS06510;product=beta-ketoacyl-ACP synthase I;protein_id=WP_011192688.1;transl_table=11 NZ_CPUY01000005.1 RefSeq gene 97688 99757 . + . ID=gene-AD853_RS06515;Name=mnmC;gbkey=Gene;gene=mnmC;gene_biotype=protein_coding;locus_tag=AD853_RS06515;old_locus_tag=ERS008462_01318 NZ_CPUY01000005.1 Protein Homology CDS 97688 99757 . + 0 ID=cds-WP_038823701.1;Parent=gene-AD853_RS06515;Dbxref=GenBank:WP_038823701.1;Name=WP_038823701.1;Ontology_term=GO:0008033,GO:0004808,GO:0016491;gbkey=CDS;gene=mnmC;go_function=tRNA (5-methylaminomethyl-2-thiouridylate)(34)-methyltransferase activity|0004808||IEA,oxidoreductase activity|0016491||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209716.1;locus_tag=AD853_RS06515;product=bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmC2/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC1;protein_id=WP_038823701.1;transl_table=11 NZ_CPUY01000005.1 RefSeq gene 99935 100213 . - . ID=gene-AD853_RS06520;Name=AD853_RS06520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS06520;old_locus_tag=ERS008462_01319 NZ_CPUY01000005.1 Protein Homology CDS 99935 100213 . - 0 ID=cds-WP_002209715.1;Parent=gene-AD853_RS06520;Dbxref=GenBank:WP_002209715.1;Name=WP_002209715.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209715.1;locus_tag=AD853_RS06520;product=YfcL family protein;protein_id=WP_002209715.1;transl_table=11 NZ_CPUY01000005.1 RefSeq gene 100271 100813 . - . ID=gene-AD853_RS06525;Name=AD853_RS06525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS06525;old_locus_tag=ERS008462_01320 NZ_CPUY01000005.1 Protein Homology CDS 100271 100813 . - 0 ID=cds-WP_012104884.1;Parent=gene-AD853_RS06525;Dbxref=GenBank:WP_012104884.1;Name=WP_012104884.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209714.1;locus_tag=AD853_RS06525;product=elongation factor P hydroxylase;protein_id=WP_012104884.1;transl_table=11 NZ_CPUY01000005.1 RefSeq gene 100928 101734 . - . ID=gene-AD853_RS06530;Name=AD853_RS06530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS06530;old_locus_tag=ERS008462_01321 NZ_CPUY01000005.1 Protein Homology CDS 100928 101734 . - 0 ID=cds-WP_002209713.1;Parent=gene-AD853_RS06530;Dbxref=GenBank:WP_002209713.1;Name=WP_002209713.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004702892.1;locus_tag=AD853_RS06530;product=sulfite exporter TauE/SafE family protein;protein_id=WP_002209713.1;transl_table=11 NZ_CPUY01000005.1 RefSeq gene 101738 102565 . - . ID=gene-AD853_RS06535;Name=mepA;gbkey=Gene;gene=mepA;gene_biotype=protein_coding;locus_tag=AD853_RS06535;old_locus_tag=ERS008462_01322 NZ_CPUY01000005.1 Protein Homology CDS 101738 102565 . - 0 ID=cds-WP_002225365.1;Parent=gene-AD853_RS06535;Dbxref=GenBank:WP_002225365.1;Name=WP_002225365.1;Ontology_term=GO:0006508,GO:0004252,GO:0030288;gbkey=CDS;gene=mepA;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016674225.1;locus_tag=AD853_RS06535;product=penicillin-insensitive murein endopeptidase;protein_id=WP_002225365.1;transl_table=11 NZ_CPUY01000005.1 RefSeq gene 102571 103656 . - . ID=gene-AD853_RS06540;Name=aroC;gbkey=Gene;gene=aroC;gene_biotype=protein_coding;locus_tag=AD853_RS06540;old_locus_tag=ERS008462_01323 NZ_CPUY01000005.1 Protein Homology CDS 102571 103656 . - 0 ID=cds-WP_002209711.1;Parent=gene-AD853_RS06540;Dbxref=GenBank:WP_002209711.1;Name=WP_002209711.1;Ontology_term=GO:0009073,GO:0004107;gbkey=CDS;gene=aroC;go_function=chorismate synthase activity|0004107||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209711.1;locus_tag=AD853_RS06540;product=chorismate synthase;protein_id=WP_002209711.1;transl_table=11 NZ_CPUY01000005.1 RefSeq gene 103733 104665 . - . ID=gene-AD853_RS06545;Name=prmB;gbkey=Gene;gene=prmB;gene_biotype=protein_coding;locus_tag=AD853_RS06545;old_locus_tag=ERS008462_01324 NZ_CPUY01000005.1 Protein Homology CDS 103733 104665 . - 0 ID=cds-WP_002209710.1;Parent=gene-AD853_RS06545;Dbxref=GenBank:WP_002209710.1;Name=WP_002209710.1;Ontology_term=GO:0018364,GO:0042273,GO:0008276,GO:0008757;gbkey=CDS;gene=prmB;go_function=protein methyltransferase activity|0008276||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=peptidyl-glutamine methylation|0018364||IEA,ribosomal large subunit biogenesis|0042273||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019081969.1;locus_tag=AD853_RS06545;product=50S ribosomal protein L3 N(5)-glutamine methyltransferase;protein_id=WP_002209710.1;transl_table=11 NZ_CPUY01000005.1 RefSeq gene 105035 105565 . + . ID=gene-AD853_RS06550;Name=smrB;gbkey=Gene;gene=smrB;gene_biotype=protein_coding;locus_tag=AD853_RS06550;old_locus_tag=ERS008462_01325 NZ_CPUY01000005.1 Protein Homology CDS 105035 105565 . + 0 ID=cds-WP_002227846.1;Parent=gene-AD853_RS06550;Dbxref=GenBank:WP_002227846.1;Name=WP_002227846.1;gbkey=CDS;gene=smrB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005171938.1;locus_tag=AD853_RS06550;product=endonuclease SmrB;protein_id=WP_002227846.1;transl_table=11 NZ_CPUY01000005.1 RefSeq gene 105817 106308 . - . ID=gene-AD853_RS06555;Name=sixA;gbkey=Gene;gene=sixA;gene_biotype=protein_coding;locus_tag=AD853_RS06555;old_locus_tag=ERS008462_01326 NZ_CPUY01000005.1 Protein Homology CDS 105817 106308 . - 0 ID=cds-WP_002209707.1;Parent=gene-AD853_RS06555;Dbxref=GenBank:WP_002209707.1;Name=WP_002209707.1;Ontology_term=GO:0036211,GO:0101006,GO:0005737;gbkey=CDS;gene=sixA;go_component=cytoplasm|0005737||IEA;go_function=protein histidine phosphatase activity|0101006||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012104883.1;locus_tag=AD853_RS06555;product=phosphohistidine phosphatase SixA;protein_id=WP_002209707.1;transl_table=11 NZ_CPUY01000005.1 RefSeq gene 106881 109223 . - . ID=gene-AD853_RS06560;Name=fadJ;gbkey=Gene;gene=fadJ;gene_biotype=protein_coding;locus_tag=AD853_RS06560;old_locus_tag=ERS008462_01327 NZ_CPUY01000005.1 Protein Homology CDS 106881 109223 . - 0 ID=cds-WP_050124580.1;Parent=gene-AD853_RS06560;Dbxref=GenBank:WP_050124580.1;Name=WP_050124580.1;Ontology_term=GO:0009062,GO:0003857,GO:0004300,GO:0008692,GO:0051287;gbkey=CDS;gene=fadJ;go_function=(3S)-3-hydroxyacyl-CoA dehydrogenase (NAD+) activity|0003857||IEA,enoyl-CoA hydratase activity|0004300||IEA,3-hydroxybutyryl-CoA epimerase activity|0008692||IEA,NAD binding|0051287||IEA;go_process=fatty acid catabolic process|0009062||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209705.1;locus_tag=AD853_RS06560;product=fatty acid oxidation complex subunit alpha FadJ;protein_id=WP_050124580.1;transl_table=11 NZ_CPUY01000005.1 RefSeq gene 109223 110533 . - . ID=gene-AD853_RS06565;Name=fadI;gbkey=Gene;gene=fadI;gene_biotype=protein_coding;locus_tag=AD853_RS06565;old_locus_tag=ERS008462_01328 NZ_CPUY01000005.1 Protein Homology CDS 109223 110533 . - 0 ID=cds-WP_002209704.1;Parent=gene-AD853_RS06565;Dbxref=GenBank:WP_002209704.1;Name=WP_002209704.1;gbkey=CDS;gene=fadI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011147408.1;locus_tag=AD853_RS06565;product=acetyl-CoA C-acyltransferase FadI;protein_id=WP_002209704.1;transl_table=11 NZ_CPUY01000005.1 RefSeq gene 110820 111116 . - . ID=gene-AD853_RS06570;Name=AD853_RS06570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS06570;old_locus_tag=ERS008462_01329 NZ_CPUY01000005.1 Protein Homology CDS 110820 111116 . - 0 ID=cds-WP_002227845.1;Parent=gene-AD853_RS06570;Dbxref=GenBank:WP_002227845.1;Name=WP_002227845.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015841013.1;locus_tag=AD853_RS06570;product=YfcZ/YiiS family protein;protein_id=WP_002227845.1;transl_table=11 NZ_CPUY01000005.1 RefSeq gene 111530 112795 . + . ID=gene-AD853_RS06575;Name=fadL;gbkey=Gene;gene=fadL;gene_biotype=protein_coding;locus_tag=AD853_RS06575;old_locus_tag=ERS008462_01330 NZ_CPUY01000005.1 Protein Homology CDS 111530 112795 . + 0 ID=cds-WP_011192695.1;Parent=gene-AD853_RS06575;Dbxref=GenBank:WP_011192695.1;Name=WP_011192695.1;gbkey=CDS;gene=fadL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012303917.1;locus_tag=AD853_RS06575;product=long-chain fatty acid transporter FadL;protein_id=WP_011192695.1;transl_table=11 NZ_CPUY01000005.1 RefSeq gene 112902 113666 . - . ID=gene-AD853_RS06580;Name=mlaA;gbkey=Gene;gene=mlaA;gene_biotype=protein_coding;locus_tag=AD853_RS06580;old_locus_tag=ERS008462_01331 NZ_CPUY01000005.1 Protein Homology CDS 112902 113666 . - 0 ID=cds-WP_002209701.1;Parent=gene-AD853_RS06580;Dbxref=GenBank:WP_002209701.1;Name=WP_002209701.1;Ontology_term=GO:0016020;gbkey=CDS;gene=mlaA;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209701.1;locus_tag=AD853_RS06580;product=phospholipid-binding lipoprotein MlaA;protein_id=WP_002209701.1;transl_table=11 NZ_CPUY01000005.1 RefSeq gene 113702 114928 . - . ID=gene-AD853_RS06585;Name=ccmI;gbkey=Gene;gene=ccmI;gene_biotype=protein_coding;locus_tag=AD853_RS06585;old_locus_tag=ERS008462_01332 NZ_CPUY01000005.1 Protein Homology CDS 113702 114928 . - 0 ID=cds-WP_012104880.1;Parent=gene-AD853_RS06585;Dbxref=GenBank:WP_012104880.1;Name=WP_012104880.1;Ontology_term=GO:0017004,GO:0051082;gbkey=CDS;gene=ccmI;go_function=unfolded protein binding|0051082||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012104880.1;locus_tag=AD853_RS06585;product=c-type cytochrome biogenesis protein CcmI;protein_id=WP_012104880.1;transl_table=11 NZ_CPUY01000005.1 RefSeq gene 114928 115440 . - . ID=gene-AD853_RS06590;Name=AD853_RS06590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS06590;old_locus_tag=ERS008462_01333 NZ_CPUY01000005.1 Protein Homology CDS 114928 115440 . - 0 ID=cds-WP_038823703.1;Parent=gene-AD853_RS06590;Dbxref=GenBank:WP_038823703.1;Name=WP_038823703.1;Ontology_term=GO:0017004,GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002214855.1;locus_tag=AD853_RS06590;product=cytochrome c-type biogenesis protein;protein_id=WP_038823703.1;transl_table=11 NZ_CPUY01000005.1 RefSeq gene 115437 116003 . - . ID=gene-AD853_RS06595;Name=AD853_RS06595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS06595;old_locus_tag=ERS008462_01334 NZ_CPUY01000005.1 Protein Homology CDS 115437 116003 . - 0 ID=cds-WP_002209699.1;Parent=gene-AD853_RS06595;Dbxref=GenBank:WP_002209699.1;Name=WP_002209699.1;Ontology_term=GO:0017004,GO:0015036,GO:0030288;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=disulfide oxidoreductase activity|0015036||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002222247.1;locus_tag=AD853_RS06595;product=DsbE family thiol:disulfide interchange protein;protein_id=WP_002209699.1;transl_table=11 NZ_CPUY01000005.1 RefSeq gene 116000 117970 . - . ID=gene-AD853_RS06600;Name=AD853_RS06600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS06600;old_locus_tag=ERS008462_01335 NZ_CPUY01000005.1 Protein Homology CDS 116000 117970 . - 0 ID=cds-WP_038823704.1;Parent=gene-AD853_RS06600;Dbxref=GenBank:WP_038823704.1;Name=WP_038823704.1;Ontology_term=GO:0017004,GO:0015232,GO:0020037,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=heme transmembrane transporter activity|0015232||IEA,heme binding|0020037||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192697.1;locus_tag=AD853_RS06600;product=heme lyase CcmF/NrfE family subunit;protein_id=WP_038823704.1;transl_table=11 NZ_CPUY01000005.1 RefSeq gene 117967 118461 . - . ID=gene-AD853_RS06605;Name=ccmE;gbkey=Gene;gene=ccmE;gene_biotype=protein_coding;locus_tag=AD853_RS06605;old_locus_tag=ERS008462_01336 NZ_CPUY01000005.1 Protein Homology CDS 117967 118461 . - 0 ID=cds-WP_038823705.1;Parent=gene-AD853_RS06605;Dbxref=GenBank:WP_038823705.1;Name=WP_038823705.1;Ontology_term=GO:0017004,GO:0020037,GO:0005886;gbkey=CDS;gene=ccmE;go_component=plasma membrane|0005886||IEA;go_function=heme binding|0020037||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209697.1;locus_tag=AD853_RS06605;product=cytochrome c maturation protein CcmE;protein_id=WP_038823705.1;transl_table=11 NZ_CPUY01000005.1 RefSeq gene 118458 118775 . - . ID=gene-AD853_RS06610;Name=ccmD;gbkey=Gene;gene=ccmD;gene_biotype=protein_coding;locus_tag=AD853_RS06610;old_locus_tag=ERS008462_01337 NZ_CPUY01000005.1 Protein Homology CDS 118458 118775 . - 0 ID=cds-WP_038823706.1;Parent=gene-AD853_RS06610;Dbxref=GenBank:WP_038823706.1;Name=WP_038823706.1;Ontology_term=GO:0015886,GO:0017004,GO:0016020;gbkey=CDS;gene=ccmD;go_component=membrane|0016020||IEA;go_process=heme transport|0015886||IEA,cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209696.1;locus_tag=AD853_RS06610;product=heme exporter protein CcmD;protein_id=WP_038823706.1;transl_table=11 NZ_CPUY01000005.1 RefSeq gene 118772 119509 . - . ID=gene-AD853_RS06615;Name=AD853_RS06615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS06615;old_locus_tag=ERS008462_01338 NZ_CPUY01000005.1 Protein Homology CDS 118772 119509 . - 0 ID=cds-WP_002209695.1;Parent=gene-AD853_RS06615;Dbxref=GenBank:WP_002209695.1;Name=WP_002209695.1;Ontology_term=GO:0017004,GO:0015232,GO:0020037,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=heme transmembrane transporter activity|0015232||IEA,heme binding|0020037||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019081955.1;locus_tag=AD853_RS06615;product=heme ABC transporter permease;protein_id=WP_002209695.1;transl_table=11 NZ_CPUY01000005.1 RefSeq gene 119572 120231 . - . ID=gene-AD853_RS06620;Name=ccmB;gbkey=Gene;gene=ccmB;gene_biotype=protein_coding;locus_tag=AD853_RS06620;old_locus_tag=ERS008462_01339 NZ_CPUY01000005.1 Protein Homology CDS 119572 120231 . - 0 ID=cds-WP_002209694.1;Parent=gene-AD853_RS06620;Dbxref=GenBank:WP_002209694.1;Name=WP_002209694.1;Ontology_term=GO:0015886,GO:0015232;gbkey=CDS;gene=ccmB;go_function=heme transmembrane transporter activity|0015232||IEA;go_process=heme transport|0015886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209694.1;locus_tag=AD853_RS06620;product=heme exporter protein CcmB;protein_id=WP_002209694.1;transl_table=11 NZ_CPUY01000005.1 RefSeq gene 120201 120857 . - . ID=gene-AD853_RS06625;Name=ccmA;gbkey=Gene;gene=ccmA;gene_biotype=protein_coding;locus_tag=AD853_RS06625;old_locus_tag=ERS008462_01340 NZ_CPUY01000005.1 Protein Homology CDS 120201 120857 . - 0 ID=cds-WP_011192700.1;Parent=gene-AD853_RS06625;Dbxref=GenBank:WP_011192700.1;Name=WP_011192700.1;Ontology_term=GO:0017004,GO:0005524,GO:0022857;gbkey=CDS;gene=ccmA;go_function=ATP binding|0005524||IEA,transmembrane transporter activity|0022857||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012104878.1;locus_tag=AD853_RS06625;product=cytochrome c biogenesis heme-transporting ATPase CcmA;protein_id=WP_011192700.1;transl_table=11 NZ_CPUY01000005.1 RefSeq gene 121304 121771 . - . ID=gene-AD853_RS06630;Name=AD853_RS06630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS06630;old_locus_tag=ERS008462_01341 NZ_CPUY01000005.1 Protein Homology CDS 121304 121771 . - 0 ID=cds-WP_038401328.1;Parent=gene-AD853_RS06630;Dbxref=GenBank:WP_038401328.1;Name=WP_038401328.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012303913.1;locus_tag=AD853_RS06630;product=hypothetical protein;protein_id=WP_038401328.1;transl_table=11 NZ_CPUY01000005.1 RefSeq gene 122027 122101 . - . ID=gene-AD853_RS06635;Name=AD853_RS06635;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD853_RS06635;old_locus_tag=ERS008462_01342 NZ_CPUY01000005.1 tRNAscan-SE tRNA 122027 122101 . - . ID=rna-AD853_RS06635;Parent=gene-AD853_RS06635;anticodon=(pos:complement(122066..122068));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD853_RS06635;product=tRNA-Arg NZ_CPUY01000005.1 tRNAscan-SE exon 122027 122101 . - . ID=exon-AD853_RS06635-1;Parent=rna-AD853_RS06635;anticodon=(pos:complement(122066..122068));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD853_RS06635;product=tRNA-Arg NZ_CPUY01000005.1 RefSeq gene 122388 122930 . + . ID=gene-AD853_RS06640;Name=AD853_RS06640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS06640;old_locus_tag=ERS008462_01343 NZ_CPUY01000005.1 Protein Homology CDS 122388 122930 . + 0 ID=cds-WP_002209691.1;Parent=gene-AD853_RS06640;Dbxref=GenBank:WP_002209691.1;Name=WP_002209691.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012104874.1;locus_tag=AD853_RS06640;product=LemA family protein;protein_id=WP_002209691.1;transl_table=11 NZ_CPUY01000005.1 RefSeq gene 122935 124974 . + . ID=gene-AD853_RS06645;Name=AD853_RS06645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS06645;old_locus_tag=ERS008462_01344 NZ_CPUY01000005.1 Protein Homology CDS 122935 124974 . + 0 ID=cds-WP_038823708.1;Parent=gene-AD853_RS06645;Dbxref=GenBank:WP_038823708.1;Name=WP_038823708.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012413816.1;locus_tag=AD853_RS06645;product=DUF2207 domain-containing protein;protein_id=WP_038823708.1;transl_table=11 NZ_CPUY01000005.1 RefSeq gene 125350 125691 . + . ID=gene-AD853_RS06650;Name=AD853_RS06650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS06650;old_locus_tag=ERS008462_01345 NZ_CPUY01000005.1 Protein Homology CDS 125350 125691 . + 0 ID=cds-WP_002209688.1;Parent=gene-AD853_RS06650;Dbxref=GenBank:WP_002209688.1;Name=WP_002209688.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209688.1;locus_tag=AD853_RS06650;product=zinc ribbon domain-containing protein YjdM;protein_id=WP_002209688.1;transl_table=11 NZ_CPUY01000005.1 RefSeq gene 125766 126113 . - . ID=gene-AD853_RS06655;Name=AD853_RS06655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS06655;old_locus_tag=ERS008462_01346 NZ_CPUY01000005.1 Protein Homology CDS 125766 126113 . - 0 ID=cds-WP_002209687.1;Parent=gene-AD853_RS06655;Dbxref=GenBank:WP_002209687.1;Name=WP_002209687.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209687.1;locus_tag=AD853_RS06655;product=hypothetical protein;protein_id=WP_002209687.1;transl_table=11 NZ_CPUY01000005.1 RefSeq gene 126138 126641 . - . ID=gene-AD853_RS22460;Name=AD853_RS22460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS22460;old_locus_tag=ERS008462_01347 NZ_CPUY01000005.1 Protein Homology CDS 126138 126641 . - 0 ID=cds-WP_080624443.1;Parent=gene-AD853_RS22460;Dbxref=GenBank:WP_080624443.1;Name=WP_080624443.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017739.6;locus_tag=AD853_RS22460;product=contractile injection system protein%2C VgrG/Pvc8 family;protein_id=WP_080624443.1;transl_table=11 NZ_CPUY01000005.1 RefSeq gene 126935 130762 . - . ID=gene-AD853_RS06665;Name=tssM;gbkey=Gene;gene=tssM;gene_biotype=protein_coding;locus_tag=AD853_RS06665;old_locus_tag=ERS008462_01348 NZ_CPUY01000005.1 Protein Homology CDS 126935 130762 . - 0 ID=cds-WP_038823710.1;Parent=gene-AD853_RS06665;Dbxref=GenBank:WP_038823710.1;Name=WP_038823710.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssM;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002214843.1;locus_tag=AD853_RS06665;product=type VI secretion system membrane subunit TssM;protein_id=WP_038823710.1;transl_table=11 NZ_CPUY01000005.1 RefSeq gene 130771 132147 . - . ID=gene-AD853_RS06670;Name=tssL;gbkey=Gene;gene=tssL;gene_biotype=protein_coding;locus_tag=AD853_RS06670;old_locus_tag=ERS008462_01349 NZ_CPUY01000005.1 Protein Homology CDS 130771 132147 . - 0 ID=cds-WP_012104870.1;Parent=gene-AD853_RS06670;Dbxref=GenBank:WP_012104870.1;Name=WP_012104870.1;Ontology_term=GO:0033103,GO:0033104;gbkey=CDS;gene=tssL;go_component=type VI protein secretion system complex|0033104||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011816670.1;locus_tag=AD853_RS06670;product=type VI secretion system protein TssL%2C long form;protein_id=WP_012104870.1;transl_table=11 NZ_CPUY01000005.1 RefSeq gene 132144 133493 . - . ID=gene-AD853_RS06675;Name=tssK;gbkey=Gene;gene=tssK;gene_biotype=protein_coding;locus_tag=AD853_RS06675;old_locus_tag=ERS008462_01350 NZ_CPUY01000005.1 Protein Homology CDS 132144 133493 . - 0 ID=cds-WP_002211571.1;Parent=gene-AD853_RS06675;Dbxref=GenBank:WP_002211571.1;Name=WP_002211571.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssK;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019080948.1;locus_tag=AD853_RS06675;product=type VI secretion system baseplate subunit TssK;protein_id=WP_002211571.1;transl_table=11 NZ_CPUY01000005.1 RefSeq gene 133497 134036 . - . ID=gene-AD853_RS06680;Name=tssJ;gbkey=Gene;gene=tssJ;gene_biotype=protein_coding;locus_tag=AD853_RS06680;old_locus_tag=ERS008462_01351 NZ_CPUY01000005.1 Protein Homology CDS 133497 134036 . - 0 ID=cds-WP_002211572.1;Parent=gene-AD853_RS06680;Dbxref=GenBank:WP_002211572.1;Name=WP_002211572.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssJ;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211572.1;locus_tag=AD853_RS06680;product=type VI secretion system lipoprotein TssJ;protein_id=WP_002211572.1;transl_table=11 NZ_CPUY01000005.1 RefSeq gene 134289 134774 . - . ID=gene-AD853_RS06685;Name=AD853_RS06685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS06685;old_locus_tag=ERS008462_01352 NZ_CPUY01000005.1 Protein Homology CDS 134289 134774 . - 0 ID=cds-WP_002211573.1;Parent=gene-AD853_RS06685;Dbxref=GenBank:WP_002211573.1;Name=WP_002211573.1;Ontology_term=GO:0033103;gbkey=CDS;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211573.1;locus_tag=AD853_RS06685;product=Hcp family type VI secretion system effector;protein_id=WP_002211573.1;transl_table=11 NZ_CPUY01000005.1 RefSeq gene 135107 136609 . - . ID=gene-AD853_RS06690;Name=tssC;gbkey=Gene;gene=tssC;gene_biotype=protein_coding;locus_tag=AD853_RS06690;old_locus_tag=ERS008462_01353 NZ_CPUY01000005.1 Protein Homology CDS 135107 136609 . - 0 ID=cds-WP_038823711.1;Parent=gene-AD853_RS06690;Dbxref=GenBank:WP_038823711.1;Name=WP_038823711.1;Ontology_term=GO:0033103,GO:0033104;gbkey=CDS;gene=tssC;go_component=type VI protein secretion system complex|0033104||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002404159.1;locus_tag=AD853_RS06690;product=type VI secretion system contractile sheath large subunit;protein_id=WP_038823711.1;transl_table=11 NZ_CPUY01000005.1 RefSeq pseudogene 136633 137149 . - . ID=gene-AD853_RS06695;Name=tssB;gbkey=Gene;gene=tssB;gene_biotype=pseudogene;locus_tag=AD853_RS06695;old_locus_tag=ERS008462_01354;pseudo=true NZ_CPUY01000005.1 Protein Homology CDS 136633 137149 . - 0 ID=cds-AD853_RS06695;Parent=gene-AD853_RS06695;Note=frameshifted;Ontology_term=GO:0033103;gbkey=CDS;gene=tssB;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211575.1;locus_tag=AD853_RS06695;product=type VI secretion system contractile sheath small subunit;pseudo=true;transl_table=11 NZ_CPUY01000005.1 RefSeq gene 137256 137864 . - . ID=gene-AD853_RS06700;Name=AD853_RS06700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS06700;old_locus_tag=ERS008462_01355 NZ_CPUY01000005.1 Protein Homology CDS 137256 137864 . - 0 ID=cds-WP_011192708.1;Parent=gene-AD853_RS06700;Dbxref=GenBank:WP_011192708.1;Name=WP_011192708.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192708.1;locus_tag=AD853_RS06700;product=fimbrial protein;protein_id=WP_011192708.1;transl_table=11 NZ_CPUY01000005.1 RefSeq gene 137849 140518 . - . ID=gene-AD853_RS20380;Name=AD853_RS20380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS20380;old_locus_tag=ERS008462_01356 NZ_CPUY01000005.1 Protein Homology CDS 137849 140518 . - 0 ID=cds-WP_071990096.1;Parent=gene-AD853_RS20380;Dbxref=GenBank:WP_071990096.1;Name=WP_071990096.1;Ontology_term=GO:0009297,GO:0015473,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=fimbrial usher porin activity|0015473||IEA;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012413818.1;locus_tag=AD853_RS20380;product=fimbria/pilus outer membrane usher protein;protein_id=WP_071990096.1;transl_table=11 NZ_CPUY01000005.1 RefSeq gene 140646 141407 . - . ID=gene-AD853_RS06715;Name=AD853_RS06715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS06715;old_locus_tag=ERS008462_01357 NZ_CPUY01000005.1 Protein Homology CDS 140646 141407 . - 0 ID=cds-WP_038823713.1;Parent=gene-AD853_RS06715;Dbxref=GenBank:WP_038823713.1;Name=WP_038823713.1;Ontology_term=GO:0071555,GO:0030288;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_process=cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012303908.1;locus_tag=AD853_RS06715;product=fimbria/pilus periplasmic chaperone;protein_id=WP_038823713.1;transl_table=11 NZ_CPUY01000005.1 RefSeq gene 141564 142112 . - . ID=gene-AD853_RS06720;Name=AD853_RS06720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS06720;old_locus_tag=ERS008462_01358 NZ_CPUY01000005.1 Protein Homology CDS 141564 142112 . - 0 ID=cds-WP_038823714.1;Parent=gene-AD853_RS06720;Dbxref=GenBank:WP_038823714.1;Name=WP_038823714.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012104867.1;locus_tag=AD853_RS06720;product=fimbrial protein;protein_id=WP_038823714.1;transl_table=11 NZ_CPUY01000005.1 RefSeq gene 142323 144980 . - . ID=gene-AD853_RS06725;Name=tssH;gbkey=Gene;gene=tssH;gene_biotype=protein_coding;gene_synonym=clpV;locus_tag=AD853_RS06725;old_locus_tag=ERS008462_01359 NZ_CPUY01000005.1 Protein Homology CDS 142323 144980 . - 0 ID=cds-WP_038823728.1;Parent=gene-AD853_RS06725;Dbxref=GenBank:WP_038823728.1;Name=WP_038823728.1;Ontology_term=GO:0033103,GO:0016887,GO:0033104;gbkey=CDS;gene=tssH;go_component=type VI protein secretion system complex|0033104||IEA;go_function=ATP hydrolysis activity|0016887||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192711.1;locus_tag=AD853_RS06725;product=type VI secretion system ATPase TssH;protein_id=WP_038823728.1;transl_table=11 NZ_CPUY01000005.1 RefSeq gene 145682 147562 . + . ID=gene-AD853_RS06730;Name=tssF;gbkey=Gene;gene=tssF;gene_biotype=protein_coding;locus_tag=AD853_RS06730;old_locus_tag=ERS008462_01360 NZ_CPUY01000005.1 Protein Homology CDS 145682 147562 . + 0 ID=cds-WP_002211582.1;Parent=gene-AD853_RS06730;Dbxref=GenBank:WP_002211582.1;Name=WP_002211582.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssF;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004875821.1;locus_tag=AD853_RS06730;product=type VI secretion system baseplate subunit TssF;protein_id=WP_002211582.1;transl_table=11 NZ_CPUY01000005.1 RefSeq gene 147562 148587 . + . ID=gene-AD853_RS06735;Name=tssG;gbkey=Gene;gene=tssG;gene_biotype=protein_coding;locus_tag=AD853_RS06735;old_locus_tag=ERS008462_01361 NZ_CPUY01000005.1 Protein Homology CDS 147562 148587 . + 0 ID=cds-WP_038823715.1;Parent=gene-AD853_RS06735;Dbxref=GenBank:WP_038823715.1;Name=WP_038823715.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssG;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211583.1;locus_tag=AD853_RS06735;product=type VI secretion system baseplate subunit TssG;protein_id=WP_038823715.1;transl_table=11 NZ_CPUY01000005.1 RefSeq pseudogene 148686 149879 . + . ID=gene-AD853_RS06740;Name=AD853_RS06740;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD853_RS06740;pseudo=true NZ_CPUY01000005.1 Protein Homology CDS 148686 149879 . + 0 ID=cds-AD853_RS06740;Parent=gene-AD853_RS06740;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002365806.1;locus_tag=AD853_RS06740;product=type VI secretion system protein TssA;pseudo=true;transl_table=11 NZ_CPUY01000005.1 RefSeq gene 149886 150917 . + . ID=gene-AD853_RS06745;Name=AD853_RS06745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS06745;old_locus_tag=ERS008462_01364 NZ_CPUY01000005.1 Protein Homology CDS 149886 150917 . + 0 ID=cds-WP_038823716.1;Parent=gene-AD853_RS06745;Dbxref=GenBank:WP_038823716.1;Name=WP_038823716.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192714.1;locus_tag=AD853_RS06745;product=fimbrial protein;protein_id=WP_038823716.1;transl_table=11 NZ_CPUY01000005.1 RefSeq gene 150957 152294 . + . ID=gene-AD853_RS06750;Name=AD853_RS06750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS06750;old_locus_tag=ERS008462_01365 NZ_CPUY01000005.1 Protein Homology CDS 150957 152294 . + 0 ID=cds-WP_011192715.1;Parent=gene-AD853_RS06750;Dbxref=GenBank:WP_011192715.1;Name=WP_011192715.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016256701.1;locus_tag=AD853_RS06750;product=GlcNAc-transferase family protein;protein_id=WP_011192715.1;transl_table=11 NZ_CPUY01000005.1 RefSeq gene 152291 152992 . + . ID=gene-AD853_RS06755;Name=AD853_RS06755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS06755;old_locus_tag=ERS008462_01366 NZ_CPUY01000005.1 Protein Homology CDS 152291 152992 . + 0 ID=cds-WP_038823717.1;Parent=gene-AD853_RS06755;Dbxref=GenBank:WP_038823717.1;Name=WP_038823717.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211587.1;locus_tag=AD853_RS06755;product=hypothetical protein;protein_id=WP_038823717.1;transl_table=11 NZ_CPUY01000005.1 RefSeq gene 152993 154675 . + . ID=gene-AD853_RS06760;Name=AD853_RS06760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS06760;old_locus_tag=ERS008462_01367 NZ_CPUY01000005.1 Protein Homology CDS 152993 154675 . + 0 ID=cds-WP_038823718.1;Parent=gene-AD853_RS06760;Dbxref=GenBank:WP_038823718.1;Name=WP_038823718.1;Ontology_term=GO:0015288,GO:0042834,GO:0009279,GO:0016020;gbkey=CDS;go_component=cell outer membrane|0009279||IEA,membrane|0016020||IEA;go_function=porin activity|0015288||IEA,peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211588.1;locus_tag=AD853_RS06760;product=OmpA family protein;protein_id=WP_038823718.1;transl_table=11 NZ_CPUY01000005.1 RefSeq gene 154672 155154 . + . ID=gene-AD853_RS06765;Name=AD853_RS06765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS06765;old_locus_tag=ERS008462_01368 NZ_CPUY01000005.1 Protein Homology CDS 154672 155154 . + 0 ID=cds-WP_002215321.1;Parent=gene-AD853_RS06765;Dbxref=GenBank:WP_002215321.1;Name=WP_002215321.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011906313.1;locus_tag=AD853_RS06765;product=DcrB-related protein;protein_id=WP_002215321.1;transl_table=11 NZ_CPUY01000005.1 RefSeq gene 155527 156129 . - . ID=gene-AD853_RS06770;Name=AD853_RS06770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS06770;old_locus_tag=ERS008462_01369 NZ_CPUY01000005.1 Protein Homology CDS 155527 156129 . - 0 ID=cds-WP_038823719.1;Parent=gene-AD853_RS06770;Dbxref=GenBank:WP_038823719.1;Name=WP_038823719.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211590.1;locus_tag=AD853_RS06770;product=helix-turn-helix transcriptional regulator;protein_id=WP_038823719.1;transl_table=11 NZ_CPUY01000005.1 RefSeq gene 157370 158464 . - . ID=gene-AD853_RS06775;Name=mltB;gbkey=Gene;gene=mltB;gene_biotype=protein_coding;locus_tag=AD853_RS06775;old_locus_tag=ERS008462_01370 NZ_CPUY01000005.1 Protein Homology CDS 157370 158464 . - 0 ID=cds-WP_011192719.1;Parent=gene-AD853_RS06775;Dbxref=GenBank:WP_011192719.1;Name=WP_011192719.1;gbkey=CDS;gene=mltB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012303905.1;locus_tag=AD853_RS06775;product=lytic murein transglycosylase B;protein_id=WP_011192719.1;transl_table=11 NZ_CPUY01000005.1 RefSeq gene 158793 159812 . + . ID=gene-AD853_RS06780;Name=AD853_RS06780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS06780;old_locus_tag=ERS008462_01371 NZ_CPUY01000005.1 Protein Homology CDS 158793 159812 . + 0 ID=cds-WP_050124581.1;Parent=gene-AD853_RS06780;Dbxref=GenBank:WP_050124581.1;Name=WP_050124581.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211596.1;locus_tag=AD853_RS06780;product=iron ABC transporter substrate-binding protein;protein_id=WP_050124581.1;transl_table=11 NZ_CPUY01000005.1 RefSeq gene 159868 161454 . + . ID=gene-AD853_RS06785;Name=AD853_RS06785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS06785;old_locus_tag=ERS008462_01372 NZ_CPUY01000005.1 Protein Homology CDS 159868 161454 . + 0 ID=cds-WP_038825565.1;Parent=gene-AD853_RS06785;Dbxref=GenBank:WP_038825565.1;Name=WP_038825565.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012303903.1;locus_tag=AD853_RS06785;product=ABC transporter permease;protein_id=WP_038825565.1;transl_table=11 NZ_CPUY01000005.1 RefSeq gene 161451 162500 . + . ID=gene-AD853_RS06790;Name=AD853_RS06790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS06790;old_locus_tag=ERS008462_01373 NZ_CPUY01000005.1 Protein Homology CDS 161451 162500 . + 0 ID=cds-WP_011192722.1;Parent=gene-AD853_RS06790;Dbxref=GenBank:WP_011192722.1;Name=WP_011192722.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211598.1;locus_tag=AD853_RS06790;product=ABC transporter ATP-binding protein;protein_id=WP_011192722.1;transl_table=11 NZ_CPUY01000005.1 RefSeq gene 162580 163104 . - . ID=gene-AD853_RS06795;Name=AD853_RS06795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS06795;old_locus_tag=ERS008462_01374 NZ_CPUY01000005.1 Protein Homology CDS 162580 163104 . - 0 ID=cds-WP_002211599.1;Parent=gene-AD853_RS06795;Dbxref=GenBank:WP_002211599.1;Name=WP_002211599.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211599.1;locus_tag=AD853_RS06795;product=DUF2127 domain-containing protein;protein_id=WP_002211599.1;transl_table=11 NZ_CPUY01000005.1 RefSeq gene 163570 164049 . + . ID=gene-AD853_RS06800;Name=AD853_RS06800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS06800;old_locus_tag=ERS008462_01375 NZ_CPUY01000005.1 Protein Homology CDS 163570 164049 . + 0 ID=cds-WP_002354621.1;Parent=gene-AD853_RS06800;Dbxref=GenBank:WP_002354621.1;Name=WP_002354621.1;Ontology_term=GO:0033103;gbkey=CDS;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002354621.1;locus_tag=AD853_RS06800;product=Hcp family type VI secretion system effector;protein_id=WP_002354621.1;transl_table=11 NZ_CPUY01000005.1 RefSeq gene 164279 165127 . - . ID=gene-AD853_RS06805;Name=AD853_RS06805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS06805;old_locus_tag=ERS008462_01377 NZ_CPUY01000005.1 Protein Homology CDS 164279 165127 . - 0 ID=cds-WP_012303900.1;Parent=gene-AD853_RS06805;Dbxref=GenBank:WP_012303900.1;Name=WP_012303900.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192723.1;locus_tag=AD853_RS06805;product=DUF4225 domain-containing protein;protein_id=WP_012303900.1;transl_table=11 NZ_CPUY01000005.1 RefSeq pseudogene 165958 168384 . + . ID=gene-AD853_RS06810;Name=AD853_RS06810;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD853_RS06810;pseudo=true NZ_CPUY01000005.1 Protein Homology CDS 165958 168384 . + 0 ID=cds-AD853_RS06810;Parent=gene-AD853_RS06810;Note=internal stop;Ontology_term=GO:0009061,GO:0009055,GO:0009389,GO:0030151,GO:0043546,GO:0051539;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,dimethyl sulfoxide reductase activity|0009389||IEA,molybdenum ion binding|0030151||IEA,molybdopterin cofactor binding|0043546||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=anaerobic respiration|0009061||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211602.1;locus_tag=AD853_RS06810;product=DmsA/YnfE/YnfF family dimethyl sulfoxide reductase;pseudo=true;transl_table=11 NZ_CPUY01000005.1 RefSeq gene 168396 169013 . + . ID=gene-AD853_RS06815;Name=AD853_RS06815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS06815;old_locus_tag=ERS008462_01380 NZ_CPUY01000005.1 Protein Homology CDS 168396 169013 . + 0 ID=cds-WP_002211603.1;Parent=gene-AD853_RS06815;Dbxref=GenBank:WP_002211603.1;Name=WP_002211603.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005183646.1;locus_tag=AD853_RS06815;product=DMSO/selenate family reductase complex B subunit;protein_id=WP_002211603.1;transl_table=11 NZ_CPUY01000005.1 RefSeq gene 169015 169791 . + . ID=gene-AD853_RS06820;Name=AD853_RS06820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS06820;old_locus_tag=ERS008462_01381 NZ_CPUY01000005.1 Protein Homology CDS 169015 169791 . + 0 ID=cds-WP_038401310.1;Parent=gene-AD853_RS06820;Dbxref=GenBank:WP_038401310.1;Name=WP_038401310.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192725.1;locus_tag=AD853_RS06820;product=dimethyl sulfoxide reductase anchor subunit family protein;protein_id=WP_038401310.1;transl_table=11 NZ_CPUY01000005.1 RefSeq gene 170149 170745 . + . ID=gene-AD853_RS06825;Name=AD853_RS06825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS06825;old_locus_tag=ERS008462_01382 NZ_CPUY01000005.1 Protein Homology CDS 170149 170745 . + 0 ID=cds-WP_002228419.1;Parent=gene-AD853_RS06825;Dbxref=GenBank:WP_002228419.1;Name=WP_002228419.1;Ontology_term=GO:0006457;gbkey=CDS;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002228419.1;locus_tag=AD853_RS06825;product=TorD/DmsD family molecular chaperone;protein_id=WP_002228419.1;transl_table=11 NZ_CPUY01000005.1 RefSeq gene 170742 171311 . + . ID=gene-AD853_RS06830;Name=AD853_RS06830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS06830;old_locus_tag=ERS008462_01383 NZ_CPUY01000005.1 Protein Homology CDS 170742 171311 . + 0 ID=cds-WP_002211606.1;Parent=gene-AD853_RS06830;Dbxref=GenBank:WP_002211606.1;Name=WP_002211606.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211606.1;locus_tag=AD853_RS06830;product=4Fe-4S binding protein;protein_id=WP_002211606.1;transl_table=11 NZ_CPUY01000005.1 RefSeq gene 171557 172213 . - . ID=gene-AD853_RS06835;Name=AD853_RS06835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS06835;old_locus_tag=ERS008462_01384 NZ_CPUY01000005.1 Protein Homology CDS 171557 172213 . - 0 ID=cds-WP_002211607.1;Parent=gene-AD853_RS06835;Dbxref=GenBank:WP_002211607.1;Name=WP_002211607.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211607.1;locus_tag=AD853_RS06835;product=DUF799 domain-containing protein;protein_id=WP_002211607.1;transl_table=11 NZ_CPUY01000005.1 RefSeq gene 172210 172566 . - . ID=gene-AD853_RS06840;Name=AD853_RS06840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS06840;old_locus_tag=ERS008462_01385 NZ_CPUY01000005.1 Protein Homology CDS 172210 172566 . - 0 ID=cds-WP_002215846.1;Parent=gene-AD853_RS06840;Dbxref=GenBank:WP_002215846.1;Name=WP_002215846.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002215846.1;locus_tag=AD853_RS06840;product=DUF4810 domain-containing protein;protein_id=WP_002215846.1;transl_table=11 NZ_CPUY01000005.1 RefSeq gene 172593 173264 . - . ID=gene-AD853_RS06845;Name=AD853_RS06845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS06845;old_locus_tag=ERS008462_01386 NZ_CPUY01000005.1 Protein Homology CDS 172593 173264 . - 0 ID=cds-WP_012104857.1;Parent=gene-AD853_RS06845;Dbxref=GenBank:WP_012104857.1;Name=WP_012104857.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002215847.1;locus_tag=AD853_RS06845;product=CsgG/HfaB family protein;protein_id=WP_012104857.1;transl_table=11 NZ_CPUY01000005.1 RefSeq gene 173854 174285 . + . ID=gene-AD853_RS06850;Name=AD853_RS06850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS06850;old_locus_tag=ERS008462_01387 NZ_CPUY01000005.1 Protein Homology CDS 173854 174285 . + 0 ID=cds-WP_002211610.1;Parent=gene-AD853_RS06850;Dbxref=GenBank:WP_002211610.1;Name=WP_002211610.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192728.1;locus_tag=AD853_RS06850;product=type II toxin-antitoxin system HicB family antitoxin;protein_id=WP_002211610.1;transl_table=11 NZ_CPUY01000005.1 RefSeq gene 174380 174904 . - . ID=gene-AD853_RS06855;Name=AD853_RS06855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS06855;old_locus_tag=ERS008462_01388 NZ_CPUY01000005.1 Protein Homology CDS 174380 174904 . - 0 ID=cds-WP_002211611.1;Parent=gene-AD853_RS06855;Dbxref=GenBank:WP_002211611.1;Name=WP_002211611.1;Ontology_term=GO:0022904,GO:0009055,GO:0020037,GO:0046872,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA;go_process=respiratory electron transport chain|0022904||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211611.1;locus_tag=AD853_RS06855;product=cytochrome b;protein_id=WP_002211611.1;transl_table=11 NZ_CPUY01000005.1 RefSeq gene 175130 176365 . - . ID=gene-AD853_RS06860;Name=alaC;gbkey=Gene;gene=alaC;gene_biotype=protein_coding;locus_tag=AD853_RS06860;old_locus_tag=ERS008462_01389 NZ_CPUY01000005.1 Protein Homology CDS 175130 176365 . - 0 ID=cds-WP_002231034.1;Parent=gene-AD853_RS06860;Dbxref=GenBank:WP_002231034.1;Name=WP_002231034.1;Ontology_term=GO:0009058,GO:0003824,GO:0030170;gbkey=CDS;gene=alaC;go_function=catalytic activity|0003824||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002231034.1;locus_tag=AD853_RS06860;product=alanine transaminase;protein_id=WP_002231034.1;transl_table=11 NZ_CPUY01000005.1 RefSeq gene 176631 177878 . + . ID=gene-AD853_RS06865;Name=AD853_RS06865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS06865;old_locus_tag=ERS008462_01390 NZ_CPUY01000005.1 Protein Homology CDS 176631 177878 . + 0 ID=cds-WP_038824883.1;Parent=gene-AD853_RS06865;Dbxref=GenBank:WP_038824883.1;Name=WP_038824883.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211614.1;locus_tag=AD853_RS06865;product=DUF1479 domain-containing protein;protein_id=WP_038824883.1;transl_table=11 NZ_CPUY01000005.1 RefSeq gene 177956 178927 . - . ID=gene-AD853_RS06870;Name=glk;gbkey=Gene;gene=glk;gene_biotype=protein_coding;locus_tag=AD853_RS06870;old_locus_tag=ERS008462_01391 NZ_CPUY01000005.1 Protein Homology CDS 177956 178927 . - 0 ID=cds-WP_002211615.1;Parent=gene-AD853_RS06870;Dbxref=GenBank:WP_002211615.1;Name=WP_002211615.1;Ontology_term=GO:0006096,GO:0051156,GO:0004340,GO:0005524,GO:0005536;gbkey=CDS;gene=glk;go_function=glucokinase activity|0004340||IEA,ATP binding|0005524||IEA,D-glucose binding|0005536||IEA;go_process=glycolytic process|0006096||IEA,glucose 6-phosphate metabolic process|0051156||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211615.1;locus_tag=AD853_RS06870;product=glucokinase;protein_id=WP_002211615.1;transl_table=11 NZ_CPUY01000005.1 RefSeq gene 179108 179584 . - . ID=gene-AD853_RS06875;Name=AD853_RS06875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS06875;old_locus_tag=ERS008462_01392 NZ_CPUY01000005.1 Protein Homology CDS 179108 179584 . - 0 ID=cds-WP_038824880.1;Parent=gene-AD853_RS06875;Dbxref=GenBank:WP_038824880.1;Name=WP_038824880.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012413824.1;locus_tag=AD853_RS06875;product=multidrug/biocide efflux PACE transporter;protein_id=WP_038824880.1;transl_table=11 NZ_CPUY01000005.1 RefSeq gene 179687 180565 . + . ID=gene-AD853_RS06880;Name=AD853_RS06880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS06880;old_locus_tag=ERS008462_01393 NZ_CPUY01000005.1 Protein Homology CDS 179687 180565 . + 0 ID=cds-WP_038401301.1;Parent=gene-AD853_RS06880;Dbxref=GenBank:WP_038401301.1;Name=WP_038401301.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211617.1;locus_tag=AD853_RS06880;product=LysR family transcriptional regulator;protein_id=WP_038401301.1;transl_table=11 NZ_CPUY01000005.1 RefSeq gene 180701 181690 . + . ID=gene-AD853_RS06885;Name=AD853_RS06885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS06885;old_locus_tag=ERS008462_01394 NZ_CPUY01000005.1 Protein Homology CDS 180701 181690 . + 0 ID=cds-WP_011192731.1;Parent=gene-AD853_RS06885;Dbxref=GenBank:WP_011192731.1;Name=WP_011192731.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002232425.1;locus_tag=AD853_RS06885;product=aldo/keto reductase;protein_id=WP_011192731.1;transl_table=11 NZ_CPUY01000005.1 RefSeq gene 181960 182274 . + . ID=gene-AD853_RS06890;Name=AD853_RS06890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS06890;old_locus_tag=ERS008462_01395 NZ_CPUY01000005.1 Protein Homology CDS 181960 182274 . + 0 ID=cds-WP_002354622.1;Parent=gene-AD853_RS06890;Dbxref=GenBank:WP_002354622.1;Name=WP_002354622.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011055411.1;locus_tag=AD853_RS06890;product=DUF2502 domain-containing protein;protein_id=WP_002354622.1;transl_table=11 NZ_CPUY01000005.1 RefSeq gene 182367 183596 . - . ID=gene-AD853_RS06895;Name=AD853_RS06895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS06895;old_locus_tag=ERS008462_01396 NZ_CPUY01000005.1 Protein Homology CDS 182367 183596 . - 0 ID=cds-WP_002211621.1;Parent=gene-AD853_RS06895;Dbxref=GenBank:WP_002211621.1;Name=WP_002211621.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011815865.1;locus_tag=AD853_RS06895;product=Nramp family divalent metal transporter;protein_id=WP_002211621.1;transl_table=11 NZ_CPUY01000005.1 RefSeq gene 184047 185231 . + . ID=gene-AD853_RS06900;Name=AD853_RS06900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS06900;old_locus_tag=ERS008462_01397 NZ_CPUY01000005.1 Protein Homology CDS 184047 185231 . + 0 ID=cds-WP_002211622.1;Parent=gene-AD853_RS06900;Dbxref=GenBank:WP_002211622.1;Name=WP_002211622.1;Ontology_term=GO:1901642,GO:0005337,GO:0015293,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=nucleoside transmembrane transporter activity|0005337||IEA,symporter activity|0015293||IEA;go_process=nucleoside transmembrane transport|1901642||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016266624.1;locus_tag=AD853_RS06900;product=NupC/NupG family nucleoside CNT transporter;protein_id=WP_002211622.1;transl_table=11 NZ_CPUY01000005.1 RefSeq gene 185438 185562 . - . ID=gene-AD853_RS20390;Name=AD853_RS20390;gbkey=Gene;gene_biotype=ncRNA;locus_tag=AD853_RS20390 NZ_CPUY01000005.1 cmsearch ncRNA 185438 185562 . - . ID=rna-AD853_RS20390;Parent=gene-AD853_RS20390;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD853_RS20390;product=RtT sRNA NZ_CPUY01000005.1 cmsearch exon 185438 185562 . - . ID=exon-AD853_RS20390-1;Parent=rna-AD853_RS20390;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD853_RS20390;product=RtT sRNA NZ_CPUY01000005.1 RefSeq gene 185680 185755 . - . ID=gene-AD853_RS06905;Name=AD853_RS06905;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD853_RS06905;old_locus_tag=ERS008462_01399 NZ_CPUY01000005.1 tRNAscan-SE tRNA 185680 185755 . - . ID=rna-AD853_RS06905;Parent=gene-AD853_RS06905;anticodon=(pos:complement(185720..185722));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD853_RS06905;product=tRNA-Lys NZ_CPUY01000005.1 tRNAscan-SE exon 185680 185755 . - . ID=exon-AD853_RS06905-1;Parent=rna-AD853_RS06905;anticodon=(pos:complement(185720..185722));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD853_RS06905;product=tRNA-Lys NZ_CPUY01000005.1 RefSeq gene 185782 185914 . - . ID=gene-AD853_RS20395;Name=AD853_RS20395;gbkey=Gene;gene_biotype=ncRNA;locus_tag=AD853_RS20395 NZ_CPUY01000005.1 cmsearch ncRNA 185782 185914 . - . ID=rna-AD853_RS20395;Parent=gene-AD853_RS20395;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD853_RS20395;product=RtT sRNA NZ_CPUY01000005.1 cmsearch exon 185782 185914 . - . ID=exon-AD853_RS20395-1;Parent=rna-AD853_RS20395;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD853_RS20395;product=RtT sRNA NZ_CPUY01000005.1 RefSeq gene 185955 186030 . - . ID=gene-AD853_RS06910;Name=AD853_RS06910;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD853_RS06910;old_locus_tag=ERS008462_01401 NZ_CPUY01000005.1 tRNAscan-SE tRNA 185955 186030 . - . ID=rna-AD853_RS06910;Parent=gene-AD853_RS06910;anticodon=(pos:complement(185995..185997));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD853_RS06910;product=tRNA-Val NZ_CPUY01000005.1 tRNAscan-SE exon 185955 186030 . - . ID=exon-AD853_RS06910-1;Parent=rna-AD853_RS06910;anticodon=(pos:complement(185995..185997));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD853_RS06910;product=tRNA-Val NZ_CPUY01000005.1 RefSeq gene 186075 186150 . - . ID=gene-AD853_RS06915;Name=AD853_RS06915;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD853_RS06915;old_locus_tag=ERS008462_01402 NZ_CPUY01000005.1 tRNAscan-SE tRNA 186075 186150 . - . ID=rna-AD853_RS06915;Parent=gene-AD853_RS06915;anticodon=(pos:complement(186115..186117));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD853_RS06915;product=tRNA-Val NZ_CPUY01000005.1 tRNAscan-SE exon 186075 186150 . - . ID=exon-AD853_RS06915-1;Parent=rna-AD853_RS06915;anticodon=(pos:complement(186115..186117));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD853_RS06915;product=tRNA-Val NZ_CPUY01000005.1 RefSeq gene 186187 186262 . - . ID=gene-AD853_RS06920;Name=AD853_RS06920;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD853_RS06920;old_locus_tag=ERS008462_01403 NZ_CPUY01000005.1 tRNAscan-SE tRNA 186187 186262 . - . ID=rna-AD853_RS06920;Parent=gene-AD853_RS06920;anticodon=(pos:complement(186227..186229));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD853_RS06920;product=tRNA-Val NZ_CPUY01000005.1 tRNAscan-SE exon 186187 186262 . - . ID=exon-AD853_RS06920-1;Parent=rna-AD853_RS06920;anticodon=(pos:complement(186227..186229));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD853_RS06920;product=tRNA-Val NZ_CPUY01000005.1 RefSeq gene 186537 187952 . + . ID=gene-AD853_RS06925;Name=gltX;gbkey=Gene;gene=gltX;gene_biotype=protein_coding;locus_tag=AD853_RS06925;old_locus_tag=ERS008462_01404 NZ_CPUY01000005.1 Protein Homology CDS 186537 187952 . + 0 ID=cds-WP_011192732.1;Parent=gene-AD853_RS06925;Dbxref=GenBank:WP_011192732.1;Name=WP_011192732.1;Ontology_term=GO:0006424,GO:0000166,GO:0004818,GO:0005524;gbkey=CDS;gene=gltX;go_function=nucleotide binding|0000166||IEA,glutamate-tRNA ligase activity|0004818||IEA,ATP binding|0005524||IEA;go_process=glutamyl-tRNA aminoacylation|0006424||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002222185.1;locus_tag=AD853_RS06925;product=glutamate--tRNA ligase;protein_id=WP_011192732.1;transl_table=11 NZ_CPUY01000005.1 RefSeq gene 188184 188259 . + . ID=gene-AD853_RS06930;Name=AD853_RS06930;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD853_RS06930;old_locus_tag=ERS008462_01405 NZ_CPUY01000005.1 tRNAscan-SE tRNA 188184 188259 . + . ID=rna-AD853_RS06930;Parent=gene-AD853_RS06930;anticodon=(pos:188217..188219);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD853_RS06930;product=tRNA-Ala NZ_CPUY01000005.1 tRNAscan-SE exon 188184 188259 . + . ID=exon-AD853_RS06930-1;Parent=rna-AD853_RS06930;anticodon=(pos:188217..188219);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD853_RS06930;product=tRNA-Ala NZ_CPUY01000005.1 RefSeq gene 188342 188417 . + . ID=gene-AD853_RS06935;Name=AD853_RS06935;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD853_RS06935;old_locus_tag=ERS008462_01406 NZ_CPUY01000005.1 tRNAscan-SE tRNA 188342 188417 . + . ID=rna-AD853_RS06935;Parent=gene-AD853_RS06935;anticodon=(pos:188375..188377);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD853_RS06935;product=tRNA-Ala NZ_CPUY01000005.1 tRNAscan-SE exon 188342 188417 . + . ID=exon-AD853_RS06935-1;Parent=rna-AD853_RS06935;anticodon=(pos:188375..188377);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD853_RS06935;product=tRNA-Ala NZ_CPUY01000005.1 RefSeq gene 188611 189216 . + . ID=gene-AD853_RS06940;Name=AD853_RS06940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS06940;old_locus_tag=ERS008462_01407 NZ_CPUY01000005.1 Protein Homology CDS 188611 189216 . + 0 ID=cds-WP_038824542.1;Parent=gene-AD853_RS06940;Dbxref=GenBank:WP_038824542.1;Name=WP_038824542.1;Ontology_term=GO:0000166,GO:0016779,GO:0046872;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,nucleotidyltransferase activity|0016779||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002213374.1;locus_tag=AD853_RS06940;product=nucleotidyltransferase family protein;protein_id=WP_038824542.1;transl_table=11 NZ_CPUY01000005.1 RefSeq gene 189348 189695 . + . ID=gene-AD853_RS06945;Name=AD853_RS06945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS06945;old_locus_tag=ERS008462_01408 NZ_CPUY01000005.1 Protein Homology CDS 189348 189695 . + 0 ID=cds-WP_024062956.1;Parent=gene-AD853_RS06945;Dbxref=GenBank:WP_024062956.1;Name=WP_024062956.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192734.1;locus_tag=AD853_RS06945;product=FlxA-like family protein;protein_id=WP_024062956.1;transl_table=11 NZ_CPUY01000005.1 RefSeq gene 189796 190011 . - . ID=gene-AD853_RS06950;Name=AD853_RS06950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS06950;old_locus_tag=ERS008462_01409 NZ_CPUY01000005.1 Protein Homology CDS 189796 190011 . - 0 ID=cds-WP_002213369.1;Parent=gene-AD853_RS06950;Dbxref=GenBank:WP_002213369.1;Name=WP_002213369.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002213369.1;locus_tag=AD853_RS06950;product=DUF3820 family protein;protein_id=WP_002213369.1;transl_table=11 NZ_CPUY01000005.1 RefSeq gene 190031 192043 . - . ID=gene-AD853_RS06955;Name=ligA;gbkey=Gene;gene=ligA;gene_biotype=protein_coding;locus_tag=AD853_RS06955;old_locus_tag=ERS008462_01410 NZ_CPUY01000005.1 Protein Homology CDS 190031 192043 . - 0 ID=cds-WP_038824541.1;Parent=gene-AD853_RS06955;Dbxref=GenBank:WP_038824541.1;Name=WP_038824541.1;Ontology_term=GO:0006260,GO:0006281,GO:0003677,GO:0003911;gbkey=CDS;gene=ligA;go_function=DNA binding|0003677||IEA,DNA ligase (NAD+) activity|0003911||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016599134.1;locus_tag=AD853_RS06955;product=NAD-dependent DNA ligase LigA;protein_id=WP_038824541.1;transl_table=11 NZ_CPUY01000005.1 RefSeq gene 192134 193120 . - . ID=gene-AD853_RS06960;Name=zipA;gbkey=Gene;gene=zipA;gene_biotype=protein_coding;locus_tag=AD853_RS06960;old_locus_tag=ERS008462_01411 NZ_CPUY01000005.1 Protein Homology CDS 192134 193120 . - 0 ID=cds-WP_002227089.1;Parent=gene-AD853_RS06960;Dbxref=GenBank:WP_002227089.1;Name=WP_002227089.1;Ontology_term=GO:0000917,GO:0005515,GO:0016020;gbkey=CDS;gene=zipA;go_component=membrane|0016020||IEA;go_function=protein binding|0005515||IEA;go_process=division septum assembly|0000917||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002227089.1;locus_tag=AD853_RS06960;product=cell division protein ZipA;protein_id=WP_002227089.1;transl_table=11 NZ_CPUY01000005.1 RefSeq gene 193369 194103 . + . ID=gene-AD853_RS06965;Name=cysZ;gbkey=Gene;gene=cysZ;gene_biotype=protein_coding;locus_tag=AD853_RS06965;old_locus_tag=ERS008462_01412 NZ_CPUY01000005.1 Protein Homology CDS 193369 194103 . + 0 ID=cds-WP_002231042.1;Parent=gene-AD853_RS06965;Dbxref=GenBank:WP_002231042.1;Name=WP_002231042.1;Ontology_term=GO:0000103,GO:0015116,GO:0005886;gbkey=CDS;gene=cysZ;go_component=plasma membrane|0005886||IEA;go_function=sulfate transmembrane transporter activity|0015116||IEA;go_process=sulfate assimilation|0000103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002231042.1;locus_tag=AD853_RS06965;product=sulfate transporter CysZ;protein_id=WP_002231042.1;transl_table=11 NZ_CPUY01000005.1 RefSeq gene 194260 195228 . + . ID=gene-AD853_RS06970;Name=cysK;gbkey=Gene;gene=cysK;gene_biotype=protein_coding;locus_tag=AD853_RS06970;old_locus_tag=ERS008462_01413 NZ_CPUY01000005.1 Protein Homology CDS 194260 195228 . + 0 ID=cds-WP_002222180.1;Parent=gene-AD853_RS06970;Dbxref=GenBank:WP_002222180.1;Name=WP_002222180.1;Ontology_term=GO:0006535,GO:0004124;gbkey=CDS;gene=cysK;go_function=cysteine synthase activity|0004124||IEA;go_process=cysteine biosynthetic process from serine|0006535||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000034402.1;locus_tag=AD853_RS06970;product=cysteine synthase A;protein_id=WP_002222180.1;transl_table=11 NZ_CPUY01000005.1 RefSeq gene 195727 195984 . + . ID=gene-AD853_RS06975;Name=ptsH;gbkey=Gene;gene=ptsH;gene_biotype=protein_coding;locus_tag=AD853_RS06975;old_locus_tag=ERS008462_01414 NZ_CPUY01000005.1 Protein Homology CDS 195727 195984 . + 0 ID=cds-WP_002208488.1;Parent=gene-AD853_RS06975;Dbxref=GenBank:WP_002208488.1;Name=WP_002208488.1;gbkey=CDS;gene=ptsH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003038086.1;locus_tag=AD853_RS06975;product=phosphocarrier protein Hpr;protein_id=WP_002208488.1;transl_table=11 NZ_CPUY01000005.1 RefSeq gene 196033 197760 . + . ID=gene-AD853_RS06980;Name=ptsI;gbkey=Gene;gene=ptsI;gene_biotype=protein_coding;locus_tag=AD853_RS06980;old_locus_tag=ERS008462_01415 NZ_CPUY01000005.1 Protein Homology CDS 196033 197760 . + 0 ID=cds-WP_002208490.1;Parent=gene-AD853_RS06980;Dbxref=GenBank:WP_002208490.1;Name=WP_002208490.1;gbkey=CDS;gene=ptsI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461367.1;locus_tag=AD853_RS06980;product=phosphoenolpyruvate-protein phosphotransferase PtsI;protein_id=WP_002208490.1;transl_table=11 NZ_CPUY01000005.1 RefSeq gene 197809 198318 . + . ID=gene-AD853_RS06985;Name=crr;gbkey=Gene;gene=crr;gene_biotype=protein_coding;locus_tag=AD853_RS06985;old_locus_tag=ERS008462_01416 NZ_CPUY01000005.1 Protein Homology CDS 197809 198318 . + 0 ID=cds-WP_002208491.1;Parent=gene-AD853_RS06985;Dbxref=GenBank:WP_002208491.1;Name=WP_002208491.1;Ontology_term=GO:0009401;gbkey=CDS;gene=crr;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015833547.1;locus_tag=AD853_RS06985;product=PTS glucose transporter subunit IIA;protein_id=WP_002208491.1;transl_table=11 NZ_CPUY01000005.1 RefSeq gene 198508 199857 . - . ID=gene-AD853_RS06990;Name=AD853_RS06990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS06990;old_locus_tag=ERS008462_01417 NZ_CPUY01000005.1 Protein Homology CDS 198508 199857 . - 0 ID=cds-WP_038824539.1;Parent=gene-AD853_RS06990;Dbxref=GenBank:WP_038824539.1;Name=WP_038824539.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208493.1;locus_tag=AD853_RS06990;product=ATP-binding protein;protein_id=WP_038824539.1;transl_table=11 NZ_CPUY01000005.1 RefSeq gene 199883 200566 . - . ID=gene-AD853_RS06995;Name=AD853_RS06995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS06995;old_locus_tag=ERS008462_01418 NZ_CPUY01000005.1 Protein Homology CDS 199883 200566 . - 0 ID=cds-WP_002208494.1;Parent=gene-AD853_RS06995;Dbxref=GenBank:WP_002208494.1;Name=WP_002208494.1;Ontology_term=GO:0000160,GO:0006355,GO:0000156,GO:0003677;gbkey=CDS;go_function=phosphorelay response regulator activity|0000156||IEA,DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012104853.1;locus_tag=AD853_RS06995;product=response regulator transcription factor;protein_id=WP_002208494.1;transl_table=11 NZ_CPUY01000005.1 RefSeq gene 200754 201959 . + . ID=gene-AD853_RS07000;Name=AD853_RS07000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS07000;old_locus_tag=ERS008462_01419 NZ_CPUY01000005.1 Protein Homology CDS 200754 201959 . + 0 ID=cds-WP_038824537.1;Parent=gene-AD853_RS07000;Dbxref=GenBank:WP_038824537.1;Name=WP_038824537.1;Ontology_term=GO:0006810,GO:0005215,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208495.1;locus_tag=AD853_RS07000;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_038824537.1;transl_table=11 NZ_CPUY01000005.1 RefSeq gene 201963 203999 . + . ID=gene-AD853_RS07005;Name=AD853_RS07005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS07005;old_locus_tag=ERS008462_01420 NZ_CPUY01000005.1 Protein Homology CDS 201963 203999 . + 0 ID=cds-WP_011192738.1;Parent=gene-AD853_RS07005;Dbxref=GenBank:WP_011192738.1;Name=WP_011192738.1;Ontology_term=GO:0005524,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192738.1;locus_tag=AD853_RS07005;product=MacB family efflux pump subunit;protein_id=WP_011192738.1;transl_table=11 NZ_CPUY01000005.1 RefSeq gene 204254 205900 . - . ID=gene-AD853_RS07010;Name=AD853_RS07010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS07010;old_locus_tag=ERS008462_01421 NZ_CPUY01000005.1 Protein Homology CDS 204254 205900 . - 0 ID=cds-WP_038824536.1;Parent=gene-AD853_RS07010;Dbxref=GenBank:WP_038824536.1;Name=WP_038824536.1;Ontology_term=GO:0045454,GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;go_process=cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012303890.1;locus_tag=AD853_RS07010;product=CoA-disulfide reductase;protein_id=WP_038824536.1;transl_table=11 NZ_CPUY01000005.1 RefSeq pseudogene 205960 207436 . - . ID=gene-AD853_RS07015;Name=AD853_RS07015;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD853_RS07015;pseudo=true NZ_CPUY01000005.1 Protein Homology CDS 205960 207436 . - 0 ID=cds-AD853_RS07015;Parent=gene-AD853_RS07015;Note=frameshifted;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012413826.1;locus_tag=AD853_RS07015;product=sodium:solute symporter family protein;pseudo=true;transl_table=11 NZ_CPUY01000005.1 RefSeq gene 207433 207630 . - . ID=gene-AD853_RS07020;Name=AD853_RS07020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS07020;old_locus_tag=ERS008462_01424 NZ_CPUY01000005.1 Protein Homology CDS 207433 207630 . - 0 ID=cds-WP_002215023.1;Parent=gene-AD853_RS07020;Dbxref=GenBank:WP_002215023.1;Name=WP_002215023.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002215023.1;locus_tag=AD853_RS07020;product=DUF3311 domain-containing protein;protein_id=WP_002215023.1;transl_table=11 NZ_CPUY01000005.1 RefSeq gene 207773 208993 . - . ID=gene-AD853_RS07025;Name=AD853_RS07025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS07025;old_locus_tag=ERS008462_01425 NZ_CPUY01000005.1 Protein Homology CDS 207773 208993 . - 0 ID=cds-WP_011192741.1;Parent=gene-AD853_RS07025;Dbxref=GenBank:WP_011192741.1;Name=WP_011192741.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019079205.1;locus_tag=AD853_RS07025;product=M24 family metallopeptidase;protein_id=WP_011192741.1;transl_table=11 NZ_CPUY01000005.1 RefSeq gene 209027 210208 . - . ID=gene-AD853_RS07030;Name=AD853_RS07030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS07030;old_locus_tag=ERS008462_01426 NZ_CPUY01000005.1 Protein Homology CDS 209027 210208 . - 0 ID=cds-WP_002208500.1;Parent=gene-AD853_RS07030;Dbxref=GenBank:WP_002208500.1;Name=WP_002208500.1;Ontology_term=GO:0009086,GO:0030170,GO:0047804;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA,cysteine-S-conjugate beta-lyase activity|0047804||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002228410.1;locus_tag=AD853_RS07030;product=MalY/PatB family protein;protein_id=WP_002208500.1;transl_table=11 NZ_CPUY01000005.1 RefSeq gene 210908 212326 . + . ID=gene-AD853_RS07035;Name=AD853_RS07035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS07035;old_locus_tag=ERS008462_01427 NZ_CPUY01000005.1 Protein Homology CDS 210908 212326 . + 0 ID=cds-WP_038824192.1;Parent=gene-AD853_RS07035;Dbxref=GenBank:WP_038824192.1;Name=WP_038824192.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208502.1;locus_tag=AD853_RS07035;product=vWA domain-containing protein;protein_id=WP_038824192.1;transl_table=11 NZ_CPUY01000005.1 RefSeq gene 212571 214115 . + . ID=gene-AD853_RS07040;Name=AD853_RS07040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS07040;old_locus_tag=ERS008462_01428 NZ_CPUY01000005.1 Protein Homology CDS 212571 214115 . + 0 ID=cds-WP_038825372.1;Parent=gene-AD853_RS07040;Dbxref=GenBank:WP_038825372.1;Name=WP_038825372.1;Ontology_term=GO:0007165,GO:0000155,GO:0004673,GO:0005524;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011906317.1;locus_tag=AD853_RS07040;product=sensor histidine kinase;protein_id=WP_038825372.1;transl_table=11 NZ_CPUY01000005.1 RefSeq gene 214112 214819 . + . ID=gene-AD853_RS07045;Name=AD853_RS07045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS07045;old_locus_tag=ERS008462_01429 NZ_CPUY01000005.1 Protein Homology CDS 214112 214819 . + 0 ID=cds-WP_012303888.1;Parent=gene-AD853_RS07045;Dbxref=GenBank:WP_012303888.1;Name=WP_012303888.1;Ontology_term=GO:0000160,GO:0006355,GO:0000156,GO:0003677;gbkey=CDS;go_function=phosphorelay response regulator activity|0000156||IEA,DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002224818.1;locus_tag=AD853_RS07045;product=response regulator transcription factor;protein_id=WP_012303888.1;transl_table=11 NZ_CPUY01000005.1 RefSeq gene 215200 216432 . - . ID=gene-AD853_RS07050;Name=AD853_RS07050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS07050;old_locus_tag=ERS008462_01430 NZ_CPUY01000005.1 Protein Homology CDS 215200 216432 . - 0 ID=cds-WP_038825370.1;Parent=gene-AD853_RS07050;Dbxref=GenBank:WP_038825370.1;Name=WP_038825370.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208507.1;locus_tag=AD853_RS07050;product=EspK/GogB family type III secretion system effector;protein_id=WP_038825370.1;transl_table=11 NZ_CPUY01000005.1 RefSeq gene 216664 217557 . - . ID=gene-AD853_RS07055;Name=cysM;gbkey=Gene;gene=cysM;gene_biotype=protein_coding;locus_tag=AD853_RS07055;old_locus_tag=ERS008462_01431 NZ_CPUY01000005.1 Protein Homology CDS 216664 217557 . - 0 ID=cds-WP_038825369.1;Parent=gene-AD853_RS07055;Dbxref=GenBank:WP_038825369.1;Name=WP_038825369.1;Ontology_term=GO:0006535,GO:0004124;gbkey=CDS;gene=cysM;go_function=cysteine synthase activity|0004124||IEA;go_process=cysteine biosynthetic process from serine|0006535||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012413828.1;locus_tag=AD853_RS07055;product=cysteine synthase CysM;protein_id=WP_038825369.1;transl_table=11 NZ_CPUY01000005.1 RefSeq gene 217728 218819 . - . ID=gene-AD853_RS07060;Name=cysA;gbkey=Gene;gene=cysA;gene_biotype=protein_coding;locus_tag=AD853_RS07060;old_locus_tag=ERS008462_01432 NZ_CPUY01000005.1 Protein Homology CDS 217728 218819 . - 0 ID=cds-WP_011192745.1;Parent=gene-AD853_RS07060;Dbxref=GenBank:WP_011192745.1;Name=WP_011192745.1;Ontology_term=GO:1902358,GO:0005524,GO:0015419,GO:0016020,GO:0043190;gbkey=CDS;gene=cysA;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ABC-type sulfate transporter activity|0015419||IEA;go_process=sulfate transmembrane transport|1902358||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019081738.1;locus_tag=AD853_RS07060;product=sulfate/thiosulfate ABC transporter ATP-binding protein CysA;protein_id=WP_011192745.1;transl_table=11 NZ_CPUY01000005.1 RefSeq gene 218809 219684 . - . ID=gene-AD853_RS07065;Name=cysW;gbkey=Gene;gene=cysW;gene_biotype=protein_coding;locus_tag=AD853_RS07065;old_locus_tag=ERS008462_01433 NZ_CPUY01000005.1 Protein Homology CDS 218809 219684 . - 0 ID=cds-WP_002208510.1;Parent=gene-AD853_RS07065;Dbxref=GenBank:WP_002208510.1;Name=WP_002208510.1;Ontology_term=GO:0055085,GO:1902358,GO:0015419,GO:0016020;gbkey=CDS;gene=cysW;go_component=membrane|0016020||IEA;go_function=ABC-type sulfate transporter activity|0015419||IEA;go_process=transmembrane transport|0055085||IEA,sulfate transmembrane transport|1902358||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002231045.1;locus_tag=AD853_RS07065;product=sulfate/thiosulfate ABC transporter permease CysW;protein_id=WP_002208510.1;transl_table=11 NZ_CPUY01000005.1 RefSeq gene 219684 220517 . - . ID=gene-AD853_RS07070;Name=cysT;gbkey=Gene;gene=cysT;gene_biotype=protein_coding;locus_tag=AD853_RS07070;old_locus_tag=ERS008462_01434 NZ_CPUY01000005.1 Protein Homology CDS 219684 220517 . - 0 ID=cds-WP_002208511.1;Parent=gene-AD853_RS07070;Dbxref=GenBank:WP_002208511.1;Name=WP_002208511.1;Ontology_term=GO:0055085,GO:1902358,GO:0015419,GO:0016020;gbkey=CDS;gene=cysT;go_component=membrane|0016020||IEA;go_function=ABC-type sulfate transporter activity|0015419||IEA;go_process=transmembrane transport|0055085||IEA,sulfate transmembrane transport|1902358||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228140.1;locus_tag=AD853_RS07070;product=sulfate/thiosulfate ABC transporter permease CysT;protein_id=WP_002208511.1;transl_table=11 NZ_CPUY01000005.1 RefSeq gene 220517 221554 . - . ID=gene-AD853_RS07075;Name=AD853_RS07075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS07075;old_locus_tag=ERS008462_01435 NZ_CPUY01000005.1 Protein Homology CDS 220517 221554 . - 0 ID=cds-WP_002208512.1;Parent=gene-AD853_RS07075;Dbxref=GenBank:WP_002208512.1;Name=WP_002208512.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004707715.1;locus_tag=AD853_RS07075;product=sulfate ABC transporter substrate-binding protein;protein_id=WP_002208512.1;transl_table=11 NZ_CPUY01000005.1 RefSeq gene 221887 223419 . - . ID=gene-AD853_RS07080;Name=AD853_RS07080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS07080;old_locus_tag=ERS008462_01436 NZ_CPUY01000005.1 Protein Homology CDS 221887 223419 . - 0 ID=cds-WP_002231046.1;Parent=gene-AD853_RS07080;Dbxref=GenBank:WP_002231046.1;Name=WP_002231046.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011906318.1;locus_tag=AD853_RS07080;product=MFS transporter;protein_id=WP_002231046.1;transl_table=11 NZ_CPUY01000005.1 RefSeq gene 224024 224845 . - . ID=gene-AD853_RS07085;Name=AD853_RS07085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS07085;old_locus_tag=ERS008462_01437 NZ_CPUY01000005.1 Protein Homology CDS 224024 224845 . - 0 ID=cds-WP_233619940.1;Parent=gene-AD853_RS07085;Dbxref=GenBank:WP_233619940.1;Name=WP_233619940.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004392552.1;locus_tag=AD853_RS07085;product=MurR/RpiR family transcriptional regulator;protein_id=WP_233619940.1;transl_table=11 NZ_CPUY01000005.1 RefSeq gene 225091 225561 . - . ID=gene-AD853_RS07095;Name=nanQ;gbkey=Gene;gene=nanQ;gene_biotype=protein_coding;locus_tag=AD853_RS07095;old_locus_tag=ERS008462_01438 NZ_CPUY01000005.1 Protein Homology CDS 225091 225561 . - 0 ID=cds-WP_011192748.1;Parent=gene-AD853_RS07095;Dbxref=GenBank:WP_011192748.1;Name=WP_011192748.1;Ontology_term=GO:0006974;gbkey=CDS;gene=nanQ;go_process=DNA damage response|0006974||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192748.1;locus_tag=AD853_RS07095;product=N-acetylneuraminate anomerase;protein_id=WP_011192748.1;transl_table=11 NZ_CPUY01000005.1 RefSeq gene 225643 226515 . - . ID=gene-AD853_RS07100;Name=AD853_RS07100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS07100;old_locus_tag=ERS008462_01439 NZ_CPUY01000005.1 Protein Homology CDS 225643 226515 . - 0 ID=cds-WP_038825368.1;Parent=gene-AD853_RS07100;Dbxref=GenBank:WP_038825368.1;Name=WP_038825368.1;Ontology_term=GO:0006051,GO:0005524,GO:0008270,GO:0009384;gbkey=CDS;go_function=ATP binding|0005524||IEA,zinc ion binding|0008270||IEA,N-acylmannosamine kinase activity|0009384||IEA;go_process=N-acetylmannosamine metabolic process|0006051||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015683572.1;locus_tag=AD853_RS07100;product=N-acetylmannosamine kinase;protein_id=WP_038825368.1;transl_table=11 NZ_CPUY01000005.1 RefSeq gene 226784 227752 . + . ID=gene-AD853_RS07105;Name=AD853_RS07105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS07105;old_locus_tag=ERS008462_01440 NZ_CPUY01000005.1 Protein Homology CDS 226784 227752 . + 0 ID=cds-WP_038825367.1;Parent=gene-AD853_RS07105;Dbxref=GenBank:WP_038825367.1;Name=WP_038825367.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012303883.1;locus_tag=AD853_RS07105;product=leucine-rich repeat domain-containing protein;protein_id=WP_038825367.1;transl_table=11 NZ_CPUY01000005.1 RefSeq gene 228018 228764 . + . ID=gene-AD853_RS07110;Name=AD853_RS07110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS07110;old_locus_tag=ERS008462_01441 NZ_CPUY01000005.1 Protein Homology CDS 228018 228764 . + 0 ID=cds-WP_071838951.1;Parent=gene-AD853_RS07110;Dbxref=GenBank:WP_071838951.1;Name=WP_071838951.1;Ontology_term=GO:0005975,GO:0006051,GO:0019262,GO:0047465;gbkey=CDS;go_function=N-acylglucosamine-6-phosphate 2-epimerase activity|0047465||IEA;go_process=carbohydrate metabolic process|0005975||IEA,N-acetylmannosamine metabolic process|0006051||IEA,N-acetylneuraminate catabolic process|0019262||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016255872.1;locus_tag=AD853_RS07110;product=N-acetylmannosamine-6-phosphate 2-epimerase;protein_id=WP_071838951.1;transl_table=11 NZ_CPUY01000005.1 RefSeq gene 228827 229720 . + . ID=gene-AD853_RS07115;Name=AD853_RS07115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS07115;old_locus_tag=ERS008462_01442 NZ_CPUY01000005.1 Protein Homology CDS 228827 229720 . + 0 ID=cds-WP_002208518.1;Parent=gene-AD853_RS07115;Dbxref=GenBank:WP_002208518.1;Name=WP_002208518.1;Ontology_term=GO:0016829;gbkey=CDS;go_function=lyase activity|0016829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208518.1;locus_tag=AD853_RS07115;product=dihydrodipicolinate synthase family protein;protein_id=WP_002208518.1;transl_table=11 NZ_CPUY01000005.1 RefSeq gene 229818 230717 . - . ID=gene-AD853_RS07120;Name=AD853_RS07120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS07120;old_locus_tag=ERS008462_01443 NZ_CPUY01000005.1 Protein Homology CDS 229818 230717 . - 0 ID=cds-WP_002208519.1;Parent=gene-AD853_RS07120;Dbxref=GenBank:WP_002208519.1;Name=WP_002208519.1;Ontology_term=GO:0004601,GO:0020037;gbkey=CDS;go_function=peroxidase activity|0004601||IEA,heme binding|0020037||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012229799.1;locus_tag=AD853_RS07120;product=Dyp-type peroxidase;protein_id=WP_002208519.1;transl_table=11 NZ_CPUY01000005.1 RefSeq gene 230895 231506 . - . ID=gene-AD853_RS07125;Name=AD853_RS07125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS07125;old_locus_tag=ERS008462_01444 NZ_CPUY01000005.1 Protein Homology CDS 230895 231506 . - 0 ID=cds-WP_002208521.1;Parent=gene-AD853_RS07125;Dbxref=GenBank:WP_002208521.1;Name=WP_002208521.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208521.1;locus_tag=AD853_RS07125;product=RpoE-regulated lipoprotein;protein_id=WP_002208521.1;transl_table=11 NZ_CPUY01000005.1 RefSeq gene 231869 232282 . + . ID=gene-AD853_RS07130;Name=AD853_RS07130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS07130;old_locus_tag=ERS008462_01445 NZ_CPUY01000005.1 Protein Homology CDS 231869 232282 . + 0 ID=cds-WP_012104845.1;Parent=gene-AD853_RS07130;Dbxref=GenBank:WP_012104845.1;Name=WP_012104845.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019083666.1;locus_tag=AD853_RS07130;product=YgiW/YdeI family stress tolerance OB fold protein;protein_id=WP_012104845.1;transl_table=11 NZ_CPUY01000005.1 RefSeq gene 232787 235066 . + . ID=gene-AD853_RS07135;Name=yapL;gbkey=Gene;gene=yapL;gene_biotype=protein_coding;locus_tag=AD853_RS07135;old_locus_tag=ERS008462_01446 NZ_CPUY01000005.1 Protein Homology CDS 232787 235066 . + 0 ID=cds-WP_038825365.1;Parent=gene-AD853_RS07135;Dbxref=GenBank:WP_038825365.1;Name=WP_038825365.1;gbkey=CDS;gene=yapL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208523.1;locus_tag=AD853_RS07135;product=autotransporter YapL;protein_id=WP_038825365.1;transl_table=11 NZ_CPUY01000005.1 RefSeq gene 235158 235574 . - . ID=gene-AD853_RS07140;Name=AD853_RS07140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS07140;old_locus_tag=ERS008462_01447 NZ_CPUY01000005.1 Protein Homology CDS 235158 235574 . - 0 ID=cds-WP_011192753.1;Parent=gene-AD853_RS07140;Dbxref=GenBank:WP_011192753.1;Name=WP_011192753.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192753.1;locus_tag=AD853_RS07140;product=hypothetical protein;protein_id=WP_011192753.1;transl_table=11 NZ_CPUY01000005.1 RefSeq gene 236045 236228 . - . ID=gene-AD853_RS07150;Name=AD853_RS07150;end_range=236228,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS07150;partial=true NZ_CPUY01000005.1 Protein Homology CDS 236045 236228 . - 1 ID=cds-WP_032466930.1;Parent=gene-AD853_RS07150;Dbxref=GenBank:WP_032466930.1;Name=WP_032466930.1;Ontology_term=GO:0016747;end_range=236228,.;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004392525.1;locus_tag=AD853_RS07150;partial=true;product=GNAT family N-acetyltransferase;protein_id=WP_032466930.1;transl_table=11 ##sequence-region NZ_CPUY01000006.1 1 199678 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=633 NZ_CPUY01000006.1 RefSeq region 1 199678 . + . ID=NZ_CPUY01000006.1:1..199678;Dbxref=taxon:633;collection-date=1900/2008;country=South Africa;gbkey=Src;genome=genomic;isolation-source=not known;mol_type=genomic DNA;nat-host=pig;serovar=O:3;strain=IP32544 NZ_CPUY01000006.1 RefSeq pseudogene 1 540 . - . ID=gene-AD853_RS07155;Name=AD853_RS07155;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD853_RS07155;partial=true;pseudo=true;start_range=.,1 NZ_CPUY01000006.1 Protein Homology CDS 1 540 . - 0 ID=cds-AD853_RS07155;Parent=gene-AD853_RS07155;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002215120.1;locus_tag=AD853_RS07155;partial=true;product=fimbrial protein;pseudo=true;start_range=.,1;transl_table=11 NZ_CPUY01000006.1 RefSeq pseudogene 537 3149 . - . ID=gene-AD853_RS07160;Name=AD853_RS07160;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD853_RS07160;old_locus_tag=ERS008462_01449;pseudo=true NZ_CPUY01000006.1 Protein Homology CDS 537 3149 . - 0 ID=cds-AD853_RS07160;Parent=gene-AD853_RS07160;Note=internal stop;Ontology_term=GO:0009297,GO:0015473,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=fimbrial usher porin activity|0015473||IEA;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002228489.1;locus_tag=AD853_RS07160;product=fimbria/pilus outer membrane usher protein;pseudo=true;transl_table=11 NZ_CPUY01000006.1 RefSeq gene 3231 4010 . - . ID=gene-AD853_RS07165;Name=AD853_RS07165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS07165;old_locus_tag=ERS008462_01450 NZ_CPUY01000006.1 Protein Homology CDS 3231 4010 . - 0 ID=cds-WP_072080779.1;Parent=gene-AD853_RS07165;Dbxref=GenBank:WP_072080779.1;Name=WP_072080779.1;Ontology_term=GO:0006457,GO:0043711,GO:0030288;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_process=protein folding|0006457||IEA,pilus organization|0043711||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304009.1;locus_tag=AD853_RS07165;product=fimbrial biogenesis chaperone;protein_id=WP_072080779.1;transl_table=11 NZ_CPUY01000006.1 RefSeq gene 4129 4671 . - . ID=gene-AD853_RS07170;Name=AD853_RS07170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS07170;old_locus_tag=ERS008462_01451 NZ_CPUY01000006.1 Protein Homology CDS 4129 4671 . - 0 ID=cds-WP_012105009.1;Parent=gene-AD853_RS07170;Dbxref=GenBank:WP_012105009.1;Name=WP_012105009.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210846.1;locus_tag=AD853_RS07170;product=fimbrial protein;protein_id=WP_012105009.1;transl_table=11 NZ_CPUY01000006.1 RefSeq gene 5328 6209 . - . ID=gene-AD853_RS07175;Name=htpX;gbkey=Gene;gene=htpX;gene_biotype=protein_coding;locus_tag=AD853_RS07175;old_locus_tag=ERS008462_01453 NZ_CPUY01000006.1 Protein Homology CDS 5328 6209 . - 0 ID=cds-WP_002210847.1;Parent=gene-AD853_RS07175;Dbxref=GenBank:WP_002210847.1;Name=WP_002210847.1;Ontology_term=GO:0006508,GO:0004222;gbkey=CDS;gene=htpX;go_function=metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012144856.1;locus_tag=AD853_RS07175;product=protease HtpX;protein_id=WP_002210847.1;transl_table=11 NZ_CPUY01000006.1 RefSeq gene 6663 8735 . - . ID=gene-AD853_RS07180;Name=prc;gbkey=Gene;gene=prc;gene_biotype=protein_coding;gene_synonym=tsp;locus_tag=AD853_RS07180;old_locus_tag=ERS008462_01454 NZ_CPUY01000006.1 Protein Homology CDS 6663 8735 . - 0 ID=cds-WP_016582765.1;Parent=gene-AD853_RS07180;Dbxref=GenBank:WP_016582765.1;Name=WP_016582765.1;Ontology_term=GO:0006508,GO:0005515,GO:0008236;gbkey=CDS;gene=prc;go_function=protein binding|0005515||IEA,serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210848.1;locus_tag=AD853_RS07180;product=carboxy terminal-processing peptidase;protein_id=WP_016582765.1;transl_table=11 NZ_CPUY01000006.1 RefSeq gene 8755 9468 . - . ID=gene-AD853_RS07185;Name=proQ;gbkey=Gene;gene=proQ;gene_biotype=protein_coding;locus_tag=AD853_RS07185;old_locus_tag=ERS008462_01455 NZ_CPUY01000006.1 Protein Homology CDS 8755 9468 . - 0 ID=cds-WP_002210849.1;Parent=gene-AD853_RS07185;Dbxref=GenBank:WP_002210849.1;Name=WP_002210849.1;Ontology_term=GO:0010608,GO:0003723,GO:0033592,GO:0034057;gbkey=CDS;gene=proQ;go_function=RNA binding|0003723||IEA,RNA strand annealing activity|0033592||IEA,RNA strand-exchange activity|0034057||IEA;go_process=post-transcriptional regulation of gene expression|0010608||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004723358.1;locus_tag=AD853_RS07185;product=RNA chaperone ProQ;protein_id=WP_002210849.1;transl_table=11 NZ_CPUY01000006.1 RefSeq gene 9564 10061 . - . ID=gene-AD853_RS07190;Name=AD853_RS07190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS07190;old_locus_tag=ERS008462_01456 NZ_CPUY01000006.1 Protein Homology CDS 9564 10061 . - 0 ID=cds-WP_002210850.1;Parent=gene-AD853_RS07190;Dbxref=GenBank:WP_002210850.1;Name=WP_002210850.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210850.1;locus_tag=AD853_RS07190;product=GAF domain-containing protein;protein_id=WP_002210850.1;transl_table=11 NZ_CPUY01000006.1 RefSeq gene 10293 11540 . + . ID=gene-AD853_RS07195;Name=yebS;gbkey=Gene;gene=yebS;gene_biotype=protein_coding;locus_tag=AD853_RS07195;old_locus_tag=ERS008462_01457 NZ_CPUY01000006.1 Protein Homology CDS 10293 11540 . + 0 ID=cds-WP_038824888.1;Parent=gene-AD853_RS07195;Dbxref=GenBank:WP_038824888.1;Name=WP_038824888.1;gbkey=CDS;gene=yebS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002367629.1;locus_tag=AD853_RS07195;product=membrane integrity lipid transport subunit YebS;protein_id=WP_038824888.1;transl_table=11 NZ_CPUY01000006.1 RefSeq gene 11509 14160 . + . ID=gene-AD853_RS07200;Name=AD853_RS07200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS07200;old_locus_tag=ERS008462_01458 NZ_CPUY01000006.1 Protein Homology CDS 11509 14160 . + 0 ID=cds-WP_038401478.1;Parent=gene-AD853_RS07200;Dbxref=GenBank:WP_038401478.1;Name=WP_038401478.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002216616.1;locus_tag=AD853_RS07200;product=PqiB family protein;protein_id=WP_038401478.1;transl_table=11 NZ_CPUY01000006.1 RefSeq gene 14638 15192 . + . ID=gene-AD853_RS07205;Name=AD853_RS07205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS07205;old_locus_tag=ERS008462_01459 NZ_CPUY01000006.1 Protein Homology CDS 14638 15192 . + 0 ID=cds-WP_038824887.1;Parent=gene-AD853_RS07205;Dbxref=GenBank:WP_038824887.1;Name=WP_038824887.1;Ontology_term=GO:0005576;gbkey=CDS;go_component=extracellular region|0005576||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210852.1;locus_tag=AD853_RS07205;product=Csu type fimbrial protein;protein_id=WP_038824887.1;transl_table=11 NZ_CPUY01000006.1 RefSeq gene 15198 15728 . + . ID=gene-AD853_RS07210;Name=AD853_RS07210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS07210;old_locus_tag=ERS008462_01460 NZ_CPUY01000006.1 Protein Homology CDS 15198 15728 . + 0 ID=cds-WP_002216613.1;Parent=gene-AD853_RS07210;Dbxref=GenBank:WP_002216613.1;Name=WP_002216613.1;Ontology_term=GO:0005576;gbkey=CDS;go_component=extracellular region|0005576||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012413759.1;locus_tag=AD853_RS07210;product=Csu type fimbrial protein;protein_id=WP_002216613.1;transl_table=11 NZ_CPUY01000006.1 RefSeq gene 15749 16306 . + . ID=gene-AD853_RS07215;Name=AD853_RS07215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS07215;old_locus_tag=ERS008462_01461 NZ_CPUY01000006.1 Protein Homology CDS 15749 16306 . + 0 ID=cds-WP_002216611.1;Parent=gene-AD853_RS07215;Dbxref=GenBank:WP_002216611.1;Name=WP_002216611.1;Ontology_term=GO:0005576;gbkey=CDS;go_component=extracellular region|0005576||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002216611.1;locus_tag=AD853_RS07215;product=Csu type fimbrial protein;protein_id=WP_002216611.1;transl_table=11 NZ_CPUY01000006.1 RefSeq pseudogene 16337 17088 . + . ID=gene-AD853_RS07220;Name=AD853_RS07220;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD853_RS07220;pseudo=true NZ_CPUY01000006.1 Protein Homology CDS 16337 17088 . + 0 ID=cds-AD853_RS07220;Parent=gene-AD853_RS07220;Note=frameshifted;Ontology_term=GO:0006457,GO:0043711,GO:0030288;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_process=protein folding|0006457||IEA,pilus organization|0043711||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105005.1;locus_tag=AD853_RS07220;product=fimbrial biogenesis chaperone;pseudo=true;transl_table=11 NZ_CPUY01000006.1 RefSeq pseudogene 17191 19607 . + . ID=gene-AD853_RS07225;Name=AD853_RS07225;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD853_RS07225;old_locus_tag=ERS008462_01464;pseudo=true NZ_CPUY01000006.1 Protein Homology CDS 17191 19607 . + 0 ID=cds-AD853_RS07225;Parent=gene-AD853_RS07225;Note=frameshifted;Ontology_term=GO:0009297,GO:0015473,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=fimbrial usher porin activity|0015473||IEA;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012229783.1;locus_tag=AD853_RS07225;product=fimbria/pilus outer membrane usher protein;pseudo=true;transl_table=11 NZ_CPUY01000006.1 RefSeq gene 19813 20802 . + . ID=gene-AD853_RS07230;Name=AD853_RS07230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS07230;old_locus_tag=ERS008462_01465 NZ_CPUY01000006.1 Protein Homology CDS 19813 20802 . + 0 ID=cds-WP_038824886.1;Parent=gene-AD853_RS07230;Dbxref=GenBank:WP_038824886.1;Name=WP_038824886.1;Ontology_term=GO:0005576;gbkey=CDS;go_component=extracellular region|0005576||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002230846.1;locus_tag=AD853_RS07230;product=Csu type fimbrial protein;protein_id=WP_038824886.1;transl_table=11 NZ_CPUY01000006.1 RefSeq gene 21010 21249 . + . ID=gene-AD853_RS07235;Name=AD853_RS07235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS07235;old_locus_tag=ERS008462_01466 NZ_CPUY01000006.1 Protein Homology CDS 21010 21249 . + 0 ID=cds-WP_002210859.1;Parent=gene-AD853_RS07235;Dbxref=GenBank:WP_002210859.1;Name=WP_002210859.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304004.1;locus_tag=AD853_RS07235;product=YebV family protein;protein_id=WP_002210859.1;transl_table=11 NZ_CPUY01000006.1 RefSeq gene 21359 21748 . - . ID=gene-AD853_RS07240;Name=AD853_RS07240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS07240;old_locus_tag=ERS008462_01467 NZ_CPUY01000006.1 Protein Homology CDS 21359 21748 . - 0 ID=cds-WP_038824885.1;Parent=gene-AD853_RS07240;Dbxref=GenBank:WP_038824885.1;Name=WP_038824885.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192562.1;locus_tag=AD853_RS07240;product=ASCH domain-containing protein;protein_id=WP_038824885.1;transl_table=11 NZ_CPUY01000006.1 RefSeq gene 22023 22094 . + . ID=gene-AD853_RS22080;Name=yniD;gbkey=Gene;gene=yniD;gene_biotype=protein_coding;locus_tag=AD853_RS22080 NZ_CPUY01000006.1 Protein Homology CDS 22023 22094 . + 0 ID=cds-WP_373422365.1;Parent=gene-AD853_RS22080;Dbxref=GenBank:WP_373422365.1;Name=WP_373422365.1;gbkey=CDS;gene=yniD;inference=COORDINATES: protein motif:HMM:NF041491.1;locus_tag=AD853_RS22080;product=small membrane protein YniD;protein_id=WP_373422365.1;transl_table=11 NZ_CPUY01000006.1 RefSeq gene 22100 22273 . - . ID=gene-AD853_RS22085;Name=AD853_RS22085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS22085;old_locus_tag=ERS008462_01468 NZ_CPUY01000006.1 Protein Homology CDS 22100 22273 . - 0 ID=cds-WP_002210861.1;Parent=gene-AD853_RS22085;Dbxref=GenBank:WP_002210861.1;Name=WP_002210861.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210861.1;locus_tag=AD853_RS22085;product=YnfU family zinc-binding protein;protein_id=WP_002210861.1;transl_table=11 NZ_CPUY01000006.1 RefSeq gene 22532 22765 . - . ID=gene-AD853_RS07245;Name=AD853_RS07245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS07245;old_locus_tag=ERS008462_01469 NZ_CPUY01000006.1 Protein Homology CDS 22532 22765 . - 0 ID=cds-WP_002210862.1;Parent=gene-AD853_RS07245;Dbxref=GenBank:WP_002210862.1;Name=WP_002210862.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005272441.1;locus_tag=AD853_RS07245;product=hypothetical protein;protein_id=WP_002210862.1;transl_table=11 NZ_CPUY01000006.1 RefSeq gene 22920 24176 . - . ID=gene-AD853_RS07250;Name=AD853_RS07250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS07250;old_locus_tag=ERS008462_01470 NZ_CPUY01000006.1 Protein Homology CDS 22920 24176 . - 0 ID=cds-WP_012413761.1;Parent=gene-AD853_RS07250;Dbxref=GenBank:WP_012413761.1;Name=WP_012413761.1;Ontology_term=GO:0052689;gbkey=CDS;go_function=carboxylic ester hydrolase activity|0052689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012413761.1;locus_tag=AD853_RS07250;product=patatin-like phospholipase family protein;protein_id=WP_012413761.1;transl_table=11 NZ_CPUY01000006.1 RefSeq gene 24569 24817 . - . ID=gene-AD853_RS07255;Name=AD853_RS07255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS07255;old_locus_tag=ERS008462_01471 NZ_CPUY01000006.1 Protein Homology CDS 24569 24817 . - 0 ID=cds-WP_002210865.1;Parent=gene-AD853_RS07255;Dbxref=GenBank:WP_002210865.1;Name=WP_002210865.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210865.1;locus_tag=AD853_RS07255;product=hypothetical protein;protein_id=WP_002210865.1;transl_table=11 NZ_CPUY01000006.1 RefSeq gene 25352 25546 . + . ID=gene-AD853_RS07260;Name=AD853_RS07260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS07260;old_locus_tag=ERS008462_01472 NZ_CPUY01000006.1 Protein Homology CDS 25352 25546 . + 0 ID=cds-WP_002210867.1;Parent=gene-AD853_RS07260;Dbxref=GenBank:WP_002210867.1;Name=WP_002210867.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210867.1;locus_tag=AD853_RS07260;product=hypothetical protein;protein_id=WP_002210867.1;transl_table=11 NZ_CPUY01000006.1 RefSeq gene 25958 27187 . + . ID=gene-AD853_RS07265;Name=alr;gbkey=Gene;gene=alr;gene_biotype=protein_coding;locus_tag=AD853_RS07265;old_locus_tag=ERS008462_01473 NZ_CPUY01000006.1 Protein Homology CDS 25958 27187 . + 0 ID=cds-WP_012413762.1;Parent=gene-AD853_RS07265;Dbxref=GenBank:WP_012413762.1;Name=WP_012413762.1;Ontology_term=GO:0006522,GO:0009252,GO:0008784;gbkey=CDS;gene=alr;go_function=alanine racemase activity|0008784||IEA;go_process=alanine metabolic process|0006522||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210868.1;locus_tag=AD853_RS07265;product=alanine racemase;protein_id=WP_012413762.1;transl_table=11 NZ_CPUY01000006.1 RefSeq gene 27805 28758 . - . ID=gene-AD853_RS07270;Name=AD853_RS07270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS07270;old_locus_tag=ERS008462_01475 NZ_CPUY01000006.1 Protein Homology CDS 27805 28758 . - 0 ID=cds-WP_012413764.1;Parent=gene-AD853_RS07270;Dbxref=GenBank:WP_012413764.1;Name=WP_012413764.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304001.1;locus_tag=AD853_RS07270;product=hypothetical protein;protein_id=WP_012413764.1;transl_table=11 NZ_CPUY01000006.1 RefSeq gene 28858 30948 . - . ID=gene-AD853_RS22600;Name=AD853_RS22600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS22600;old_locus_tag=ERS008462_01476 NZ_CPUY01000006.1 Protein Homology CDS 28858 30948 . - 0 ID=cds-WP_150352097.1;Parent=gene-AD853_RS22600;Dbxref=GenBank:WP_150352097.1;Name=WP_150352097.1;Ontology_term=GO:0007155,GO:0015031;gbkey=CDS;go_process=cell adhesion|0007155||IEA,protein transport|0015031||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192564.1;locus_tag=AD853_RS22600;product=YadA family autotransporter adhesin;protein_id=WP_150352097.1;transl_table=11 NZ_CPUY01000006.1 RefSeq gene 31305 32069 . - . ID=gene-AD853_RS07280;Name=AD853_RS07280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS07280;old_locus_tag=ERS008462_01477 NZ_CPUY01000006.1 Protein Homology CDS 31305 32069 . - 0 ID=cds-WP_011192565.1;Parent=gene-AD853_RS07280;Dbxref=GenBank:WP_011192565.1;Name=WP_011192565.1;Ontology_term=GO:0071555,GO:0008270,GO:0008745,GO:0042834,GO:0046872;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA,peptidoglycan binding|0042834||IEA,metal ion binding|0046872||IEA;go_process=cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210870.1;locus_tag=AD853_RS07280;product=N-acetylmuramoyl-L-alanine amidase;protein_id=WP_011192565.1;transl_table=11 NZ_CPUY01000006.1 RefSeq gene 32623 33267 . - . ID=gene-AD853_RS07290;Name=cheZ;gbkey=Gene;gene=cheZ;gene_biotype=protein_coding;locus_tag=AD853_RS07290;old_locus_tag=ERS008462_01478 NZ_CPUY01000006.1 Protein Homology CDS 32623 33267 . - 0 ID=cds-WP_002210872.1;Parent=gene-AD853_RS07290;Dbxref=GenBank:WP_002210872.1;Name=WP_002210872.1;Ontology_term=GO:0050920,GO:0003824;gbkey=CDS;gene=cheZ;go_function=catalytic activity|0003824||IEA;go_process=regulation of chemotaxis|0050920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210872.1;locus_tag=AD853_RS07290;product=protein phosphatase CheZ;protein_id=WP_002210872.1;transl_table=11 NZ_CPUY01000006.1 RefSeq gene 33277 33666 . - . ID=gene-AD853_RS07295;Name=cheY;gbkey=Gene;gene=cheY;gene_biotype=protein_coding;locus_tag=AD853_RS07295;old_locus_tag=ERS008462_01479 NZ_CPUY01000006.1 Protein Homology CDS 33277 33666 . - 0 ID=cds-WP_002210873.1;Parent=gene-AD853_RS07295;Dbxref=GenBank:WP_002210873.1;Name=WP_002210873.1;Ontology_term=GO:0000160;gbkey=CDS;gene=cheY;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210873.1;locus_tag=AD853_RS07295;product=chemotaxis response regulator CheY;protein_id=WP_002210873.1;transl_table=11 NZ_CPUY01000006.1 RefSeq gene 33767 34816 . - . ID=gene-AD853_RS07300;Name=AD853_RS07300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS07300;old_locus_tag=ERS008462_01480 NZ_CPUY01000006.1 Protein Homology CDS 33767 34816 . - 0 ID=cds-WP_002210874.1;Parent=gene-AD853_RS07300;Dbxref=GenBank:WP_002210874.1;Name=WP_002210874.1;Ontology_term=GO:0006482,GO:0006935,GO:0018277,GO:0000156,GO:0008984,GO:0050568,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=phosphorelay response regulator activity|0000156||IEA,protein-glutamate methylesterase activity|0008984||IEA,protein-glutamine glutaminase activity|0050568||IEA;go_process=protein demethylation|0006482||IEA,chemotaxis|0006935||IEA,protein deamination|0018277||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000036372.1;locus_tag=AD853_RS07300;product=protein-glutamate methylesterase/protein-glutamine glutaminase;protein_id=WP_002210874.1;transl_table=11 NZ_CPUY01000006.1 RefSeq gene 34816 35688 . - . ID=gene-AD853_RS07305;Name=cheR;gbkey=Gene;gene=cheR;gene_biotype=protein_coding;locus_tag=AD853_RS07305;old_locus_tag=ERS008462_01481 NZ_CPUY01000006.1 Protein Homology CDS 34816 35688 . - 0 ID=cds-WP_038825085.1;Parent=gene-AD853_RS07305;Dbxref=GenBank:WP_038825085.1;Name=WP_038825085.1;Ontology_term=GO:0008757;gbkey=CDS;gene=cheR;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002214065.1;locus_tag=AD853_RS07305;product=protein-glutamate O-methyltransferase CheR;protein_id=WP_038825085.1;transl_table=11 NZ_CPUY01000006.1 RefSeq gene 35861 37471 . - . ID=gene-AD853_RS07310;Name=AD853_RS07310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS07310;old_locus_tag=ERS008462_01482 NZ_CPUY01000006.1 Protein Homology CDS 35861 37471 . - 0 ID=cds-WP_038825084.1;Parent=gene-AD853_RS07310;Dbxref=GenBank:WP_038825084.1;Name=WP_038825084.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012413766.1;locus_tag=AD853_RS07310;product=methyl-accepting chemotaxis protein;protein_id=WP_038825084.1;transl_table=11 NZ_CPUY01000006.1 RefSeq gene 37655 39328 . - . ID=gene-AD853_RS07315;Name=AD853_RS07315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS07315;old_locus_tag=ERS008462_01483 NZ_CPUY01000006.1 Protein Homology CDS 37655 39328 . - 0 ID=cds-WP_038825083.1;Parent=gene-AD853_RS07315;Dbxref=GenBank:WP_038825083.1;Name=WP_038825083.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210876.1;locus_tag=AD853_RS07315;product=methyl-accepting chemotaxis protein;protein_id=WP_038825083.1;transl_table=11 NZ_CPUY01000006.1 RefSeq gene 39569 40270 . - . ID=gene-AD853_RS07320;Name=AD853_RS07320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS07320;old_locus_tag=ERS008462_01484 NZ_CPUY01000006.1 Protein Homology CDS 39569 40270 . - 0 ID=cds-WP_002214064.1;Parent=gene-AD853_RS07320;Dbxref=GenBank:WP_002214064.1;Name=WP_002214064.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002214064.1;locus_tag=AD853_RS07320;product=YidX family protein;protein_id=WP_002214064.1;transl_table=11 NZ_CPUY01000006.1 RefSeq pseudogene 40339 43202 . - . ID=gene-AD853_RS07325;Name=AD853_RS07325;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD853_RS07325;old_locus_tag=ERS008462_01486;pseudo=true NZ_CPUY01000006.1 Protein Homology CDS 40339 43202 . - 0 ID=cds-AD853_RS07325;Parent=gene-AD853_RS07325;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016257988.1;locus_tag=AD853_RS07325;product=DUF2339 domain-containing protein;pseudo=true;transl_table=11 NZ_CPUY01000006.1 RefSeq gene 43822 44319 . - . ID=gene-AD853_RS07330;Name=cheW;gbkey=Gene;gene=cheW;gene_biotype=protein_coding;locus_tag=AD853_RS07330;old_locus_tag=ERS008462_01487 NZ_CPUY01000006.1 Protein Homology CDS 43822 44319 . - 0 ID=cds-WP_011192570.1;Parent=gene-AD853_RS07330;Dbxref=GenBank:WP_011192570.1;Name=WP_011192570.1;gbkey=CDS;gene=cheW;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192570.1;locus_tag=AD853_RS07330;product=chemotaxis protein CheW;protein_id=WP_011192570.1;transl_table=11 NZ_CPUY01000006.1 RefSeq gene 44482 46617 . - . ID=gene-AD853_RS07335;Name=cheA;gbkey=Gene;gene=cheA;gene_biotype=protein_coding;locus_tag=AD853_RS07335;old_locus_tag=ERS008462_01488 NZ_CPUY01000006.1 Protein Homology CDS 44482 46617 . - 0 ID=cds-WP_038825254.1;Parent=gene-AD853_RS07335;Dbxref=GenBank:WP_038825254.1;Name=WP_038825254.1;Ontology_term=GO:0000160,GO:0006935,GO:0016310,GO:0000155;gbkey=CDS;gene=cheA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,chemotaxis|0006935||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210886.1;locus_tag=AD853_RS07335;product=chemotaxis protein CheA;protein_id=WP_038825254.1;transl_table=11 NZ_CPUY01000006.1 RefSeq gene 46634 47893 . - . ID=gene-AD853_RS07340;Name=motB;gbkey=Gene;gene=motB;gene_biotype=protein_coding;locus_tag=AD853_RS07340;old_locus_tag=ERS008462_01489 NZ_CPUY01000006.1 Protein Homology CDS 46634 47893 . - 0 ID=cds-WP_038825255.1;Parent=gene-AD853_RS07340;Dbxref=GenBank:WP_038825255.1;Name=WP_038825255.1;gbkey=CDS;gene=motB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012104998.1;locus_tag=AD853_RS07340;product=flagellar motor protein MotB;protein_id=WP_038825255.1;transl_table=11 NZ_CPUY01000006.1 RefSeq gene 47890 48777 . - . ID=gene-AD853_RS07345;Name=motA;gbkey=Gene;gene=motA;gene_biotype=protein_coding;locus_tag=AD853_RS07345;old_locus_tag=ERS008462_01490 NZ_CPUY01000006.1 Protein Homology CDS 47890 48777 . - 0 ID=cds-WP_011192573.1;Parent=gene-AD853_RS07345;Dbxref=GenBank:WP_011192573.1;Name=WP_011192573.1;gbkey=CDS;gene=motA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011906290.1;locus_tag=AD853_RS07345;product=flagellar motor stator protein MotA;protein_id=WP_011192573.1;transl_table=11 NZ_CPUY01000006.1 RefSeq gene 48982 49563 . - . ID=gene-AD853_RS07350;Name=flhC;gbkey=Gene;gene=flhC;gene_biotype=protein_coding;locus_tag=AD853_RS07350;old_locus_tag=ERS008462_01491 NZ_CPUY01000006.1 Protein Homology CDS 48982 49563 . - 0 ID=cds-WP_002210889.1;Parent=gene-AD853_RS07350;Dbxref=GenBank:WP_002210889.1;Name=WP_002210889.1;Ontology_term=GO:0045893,GO:1902208,GO:0003677;gbkey=CDS;gene=flhC;go_function=DNA binding|0003677||IEA;go_process=positive regulation of DNA-templated transcription|0045893||IEA,regulation of bacterial-type flagellum assembly|1902208||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004934888.1;locus_tag=AD853_RS07350;product=flagellar transcriptional regulator FlhC;protein_id=WP_002210889.1;transl_table=11 NZ_CPUY01000006.1 RefSeq gene 49567 49917 . - . ID=gene-AD853_RS07355;Name=flhD;gbkey=Gene;gene=flhD;gene_biotype=protein_coding;locus_tag=AD853_RS07355;old_locus_tag=ERS008462_01492 NZ_CPUY01000006.1 Protein Homology CDS 49567 49917 . - 0 ID=cds-WP_011192574.1;Parent=gene-AD853_RS07355;Dbxref=GenBank:WP_011192574.1;Name=WP_011192574.1;Ontology_term=GO:0045893,GO:1902208,GO:0003677;gbkey=CDS;gene=flhD;go_function=DNA binding|0003677||IEA;go_process=positive regulation of DNA-templated transcription|0045893||IEA,regulation of bacterial-type flagellum assembly|1902208||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010847229.1;locus_tag=AD853_RS07355;product=flagellar transcriptional regulator FlhD;protein_id=WP_011192574.1;transl_table=11 NZ_CPUY01000006.1 RefSeq gene 51104 53803 . - . ID=gene-AD853_RS07360;Name=mgtA;gbkey=Gene;gene=mgtA;gene_biotype=protein_coding;locus_tag=AD853_RS07360;old_locus_tag=ERS008462_01493 NZ_CPUY01000006.1 Protein Homology CDS 51104 53803 . - 0 ID=cds-WP_038825257.1;Parent=gene-AD853_RS07360;Dbxref=GenBank:WP_038825257.1;Name=WP_038825257.1;Ontology_term=GO:0015693,GO:0015444,GO:0016020;gbkey=CDS;gene=mgtA;go_component=membrane|0016020||IEA;go_function=P-type magnesium transporter activity|0015444||IEA;go_process=magnesium ion transport|0015693||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210890.1;locus_tag=AD853_RS07360;product=magnesium-translocating P-type ATPase;protein_id=WP_038825257.1;transl_table=11 NZ_CPUY01000006.1 RefSeq gene 54188 54886 . - . ID=gene-AD853_RS07365;Name=AD853_RS07365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS07365;old_locus_tag=ERS008462_01494 NZ_CPUY01000006.1 Protein Homology CDS 54188 54886 . - 0 ID=cds-WP_011192576.1;Parent=gene-AD853_RS07365;Dbxref=GenBank:WP_011192576.1;Name=WP_011192576.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210891.1;locus_tag=AD853_RS07365;product=MgtC family protein;protein_id=WP_011192576.1;transl_table=11 NZ_CPUY01000006.1 RefSeq gene 56012 57751 . + . ID=gene-AD853_RS07375;Name=AD853_RS07375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS07375;old_locus_tag=ERS008462_01495 NZ_CPUY01000006.1 Protein Homology CDS 56012 57751 . + 0 ID=cds-WP_080624433.1;Parent=gene-AD853_RS07375;Dbxref=GenBank:WP_080624433.1;Name=WP_080624433.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011816624.1;locus_tag=AD853_RS07375;product=methyl-accepting chemotaxis protein;protein_id=WP_080624433.1;transl_table=11 NZ_CPUY01000006.1 RefSeq gene 57934 58125 . - . ID=gene-AD853_RS21760;Name=dsrB;gbkey=Gene;gene=dsrB;gene_biotype=protein_coding;locus_tag=AD853_RS21760;old_locus_tag=ERS008462_01496 NZ_CPUY01000006.1 Protein Homology CDS 57934 58125 . - 0 ID=cds-WP_002210892.1;Parent=gene-AD853_RS21760;Dbxref=GenBank:WP_002210892.1;Name=WP_002210892.1;gbkey=CDS;gene=dsrB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210892.1;locus_tag=AD853_RS21760;product=protein DsrB;protein_id=WP_002210892.1;transl_table=11 NZ_CPUY01000006.1 RefSeq gene 58340 58552 . - . ID=gene-AD853_RS07385;Name=cspE;gbkey=Gene;gene=cspE;gene_biotype=protein_coding;gene_synonym=gicA,msmC;locus_tag=AD853_RS07385 NZ_CPUY01000006.1 Protein Homology CDS 58340 58552 . - 0 ID=cds-WP_002210893.1;Parent=gene-AD853_RS07385;Dbxref=GenBank:WP_002210893.1;Name=WP_002210893.1;Ontology_term=GO:0031564,GO:0001072,GO:0003697,GO:0003723;gbkey=CDS;gene=cspE;go_function=transcription antitermination factor activity%2C RNA binding|0001072||IEA,single-stranded DNA binding|0003697||IEA,RNA binding|0003723||IEA;go_process=transcription antitermination|0031564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004935122.1;locus_tag=AD853_RS07385;product=transcription antiterminator/RNA stability regulator CspE;protein_id=WP_002210893.1;transl_table=11 NZ_CPUY01000006.1 RefSeq gene 59093 61468 . + . ID=gene-AD853_RS07390;Name=AD853_RS07390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS07390;old_locus_tag=ERS008462_01498 NZ_CPUY01000006.1 Protein Homology CDS 59093 61468 . + 0 ID=cds-WP_404975766.1;Parent=gene-AD853_RS07390;Dbxref=GenBank:WP_404975766.1;Name=WP_404975766.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004708104.1;locus_tag=AD853_RS07390;product=beta-galactosidase;protein_id=WP_404975766.1;transl_table=11 NZ_CPUY01000006.1 RefSeq pseudogene 61481 62275 . + . ID=gene-AD853_RS22605;Name=AD853_RS22605;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD853_RS22605;old_locus_tag=ERS008462_01499;partial=true;pseudo=true;start_range=.,61481 NZ_CPUY01000006.1 Protein Homology CDS 61481 62275 . + 0 ID=cds-AD853_RS22605;Parent=gene-AD853_RS22605;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0005975,GO:0004565,GO:0009341;gbkey=CDS;go_component=beta-galactosidase complex|0009341||IEA;go_function=beta-galactosidase activity|0004565||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: protein motif:HMM:NF014926.6;locus_tag=AD853_RS22605;partial=true;product=beta-galactosidase small subunit-related protein;pseudo=true;start_range=.,61481;transl_table=11 NZ_CPUY01000006.1 RefSeq gene 62681 63691 . + . ID=gene-AD853_RS07395;Name=AD853_RS07395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS07395;old_locus_tag=ERS008462_01500 NZ_CPUY01000006.1 Protein Homology CDS 62681 63691 . + 0 ID=cds-WP_038824531.1;Parent=gene-AD853_RS07395;Dbxref=GenBank:WP_038824531.1;Name=WP_038824531.1;Ontology_term=GO:0003960,GO:0048038,GO:0070402;gbkey=CDS;go_function=quinone reductase (NADPH) activity|0003960||IEA,quinone binding|0048038||IEA,NADPH binding|0070402||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012303993.1;locus_tag=AD853_RS07395;product=NAD(P)H-quinone oxidoreductase;protein_id=WP_038824531.1;transl_table=11 NZ_CPUY01000006.1 RefSeq gene 63974 64507 . + . ID=gene-AD853_RS07400;Name=AD853_RS07400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS07400;old_locus_tag=ERS008462_01501 NZ_CPUY01000006.1 Protein Homology CDS 63974 64507 . + 0 ID=cds-WP_002214045.1;Parent=gene-AD853_RS07400;Dbxref=GenBank:WP_002214045.1;Name=WP_002214045.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002214045.1;locus_tag=AD853_RS07400;product=YlaC family protein;protein_id=WP_002214045.1;transl_table=11 NZ_CPUY01000006.1 RefSeq gene 64975 65424 . + . ID=gene-AD853_RS07405;Name=AD853_RS07405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS07405;old_locus_tag=ERS008462_01502 NZ_CPUY01000006.1 Protein Homology CDS 64975 65424 . + 0 ID=cds-WP_002210900.1;Parent=gene-AD853_RS07405;Dbxref=GenBank:WP_002210900.1;Name=WP_002210900.1;Ontology_term=GO:0043565;gbkey=CDS;go_function=sequence-specific DNA binding|0043565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210900.1;locus_tag=AD853_RS07405;product=Lrp/AsnC family transcriptional regulator;protein_id=WP_002210900.1;transl_table=11 NZ_CPUY01000006.1 RefSeq gene 65516 66415 . + . ID=gene-AD853_RS07410;Name=AD853_RS07410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS07410;old_locus_tag=ERS008462_01503 NZ_CPUY01000006.1 Protein Homology CDS 65516 66415 . + 0 ID=cds-WP_012413770.1;Parent=gene-AD853_RS07410;Dbxref=GenBank:WP_012413770.1;Name=WP_012413770.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012104991.1;locus_tag=AD853_RS07410;product=Kdo hydroxylase family protein;protein_id=WP_012413770.1;transl_table=11 NZ_CPUY01000006.1 RefSeq gene 66718 66921 . + . ID=gene-AD853_RS07415;Name=ydfZ;gbkey=Gene;gene=ydfZ;gene_biotype=protein_coding;locus_tag=AD853_RS07415;old_locus_tag=ERS008462_01504 NZ_CPUY01000006.1 Protein Homology CDS 66718 66921 . + 0 ID=cds-WP_002210902.1;Parent=gene-AD853_RS07415;Dbxref=GenBank:WP_002210902.1;Name=WP_002210902.1;gbkey=CDS;gene=ydfZ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210902.1;locus_tag=AD853_RS07415;product=putative selenium delivery protein YdfZ;protein_id=WP_002210902.1;transl_table=11 NZ_CPUY01000006.1 RefSeq gene 67201 68526 . - . ID=gene-AD853_RS07420;Name=AD853_RS07420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS07420;old_locus_tag=ERS008462_01505 NZ_CPUY01000006.1 Protein Homology CDS 67201 68526 . - 0 ID=cds-WP_050124583.1;Parent=gene-AD853_RS07420;Dbxref=GenBank:WP_050124583.1;Name=WP_050124583.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192581.1;locus_tag=AD853_RS07420;product=AppA family phytase/histidine-type acid phosphatase;protein_id=WP_050124583.1;transl_table=11 NZ_CPUY01000006.1 RefSeq gene 68833 69096 . - . ID=gene-AD853_RS22105;Name=AD853_RS22105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS22105 NZ_CPUY01000006.1 GeneMarkS-2+ CDS 68833 69096 . - 0 ID=cds-WP_223847773.1;Parent=gene-AD853_RS22105;Dbxref=GenBank:WP_223847773.1;Name=WP_223847773.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AD853_RS22105;product=hypothetical protein;protein_id=WP_223847773.1;transl_table=11 NZ_CPUY01000006.1 RefSeq gene 69127 69984 . + . ID=gene-AD853_RS07430;Name=AD853_RS07430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS07430;old_locus_tag=ERS008462_01507 NZ_CPUY01000006.1 Protein Homology CDS 69127 69984 . + 0 ID=cds-WP_038824532.1;Parent=gene-AD853_RS07430;Dbxref=GenBank:WP_038824532.1;Name=WP_038824532.1;Ontology_term=GO:0016655;gbkey=CDS;go_function=oxidoreductase activity%2C acting on NAD(P)H%2C quinone or similar compound as acceptor|0016655||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012303990.1;locus_tag=AD853_RS07430;product=SDR family oxidoreductase;protein_id=WP_038824532.1;transl_table=11 NZ_CPUY01000006.1 RefSeq gene 70904 72484 . + . ID=gene-AD853_RS07435;Name=AD853_RS07435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS07435;old_locus_tag=ERS008462_01508 NZ_CPUY01000006.1 Protein Homology CDS 70904 72484 . + 0 ID=cds-WP_011192583.1;Parent=gene-AD853_RS07435;Dbxref=GenBank:WP_011192583.1;Name=WP_011192583.1;Ontology_term=GO:0006935,GO:0007165,GO:0004888,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane signaling receptor activity|0004888||IEA;go_process=chemotaxis|0006935||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012104988.1;locus_tag=AD853_RS07435;product=methyl-accepting chemotaxis protein;protein_id=WP_011192583.1;transl_table=11 NZ_CPUY01000006.1 RefSeq gene 72604 72864 . + . ID=gene-AD853_RS07440;Name=AD853_RS07440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS07440;old_locus_tag=ERS008462_01509 NZ_CPUY01000006.1 Protein Homology CDS 72604 72864 . + 0 ID=cds-WP_002210908.1;Parent=gene-AD853_RS07440;Dbxref=GenBank:WP_002210908.1;Name=WP_002210908.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210908.1;locus_tag=AD853_RS07440;product=hypothetical protein;protein_id=WP_002210908.1;transl_table=11 NZ_CPUY01000006.1 RefSeq gene 73124 74167 . + . ID=gene-AD853_RS07445;Name=AD853_RS07445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS07445;old_locus_tag=ERS008462_01510 NZ_CPUY01000006.1 Protein Homology CDS 73124 74167 . + 0 ID=cds-WP_038824342.1;Parent=gene-AD853_RS07445;Dbxref=GenBank:WP_038824342.1;Name=WP_038824342.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011906293.1;locus_tag=AD853_RS07445;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_038824342.1;transl_table=11 NZ_CPUY01000006.1 RefSeq gene 74313 75566 . - . ID=gene-AD853_RS07450;Name=icd;gbkey=Gene;gene=icd;gene_biotype=protein_coding;locus_tag=AD853_RS07450;old_locus_tag=ERS008462_01511 NZ_CPUY01000006.1 Protein Homology CDS 74313 75566 . - 0 ID=cds-WP_002210910.1;Parent=gene-AD853_RS07450;Dbxref=GenBank:WP_002210910.1;Name=WP_002210910.1;Ontology_term=GO:0006099,GO:0000287,GO:0004450,GO:0051287;gbkey=CDS;gene=icd;go_function=magnesium ion binding|0000287||IEA,isocitrate dehydrogenase (NADP+) activity|0004450||IEA,NAD binding|0051287||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000444467.1;locus_tag=AD853_RS07450;product=NADP-dependent isocitrate dehydrogenase;protein_id=WP_002210910.1;transl_table=11 NZ_CPUY01000006.1 RefSeq gene 75697 76323 . + . ID=gene-AD853_RS07455;Name=rluE;gbkey=Gene;gene=rluE;gene_biotype=protein_coding;locus_tag=AD853_RS07455;old_locus_tag=ERS008462_01512 NZ_CPUY01000006.1 Protein Homology CDS 75697 76323 . + 0 ID=cds-WP_012303987.1;Parent=gene-AD853_RS07455;Dbxref=GenBank:WP_012303987.1;Name=WP_012303987.1;Ontology_term=GO:0001522,GO:0009982;gbkey=CDS;gene=rluE;go_function=pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002218214.1;locus_tag=AD853_RS07455;product=23S rRNA pseudouridine(2457) synthase RluE;protein_id=WP_012303987.1;transl_table=11 NZ_CPUY01000006.1 RefSeq gene 76316 76762 . + . ID=gene-AD853_RS07460;Name=AD853_RS07460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS07460;old_locus_tag=ERS008462_01513 NZ_CPUY01000006.1 Protein Homology CDS 76316 76762 . + 0 ID=cds-WP_002210912.1;Parent=gene-AD853_RS07460;Dbxref=GenBank:WP_002210912.1;Name=WP_002210912.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005158032.1;locus_tag=AD853_RS07460;product=NUDIX hydrolase;protein_id=WP_002210912.1;transl_table=11 NZ_CPUY01000006.1 RefSeq gene 76949 78064 . + . ID=gene-AD853_RS07465;Name=mnmA;gbkey=Gene;gene=mnmA;gene_biotype=protein_coding;gene_synonym=trmU;locus_tag=AD853_RS07465;old_locus_tag=ERS008462_01514 NZ_CPUY01000006.1 Protein Homology CDS 76949 78064 . + 0 ID=cds-WP_038401874.1;Parent=gene-AD853_RS07465;Dbxref=GenBank:WP_038401874.1;Name=WP_038401874.1;Ontology_term=GO:0002143,GO:0006396,GO:0004808,GO:0016783,GO:0005737;gbkey=CDS;gene=mnmA;go_component=cytoplasm|0005737||IEA;go_function=tRNA (5-methylaminomethyl-2-thiouridylate)(34)-methyltransferase activity|0004808||IEA,sulfurtransferase activity|0016783||IEA;go_process=tRNA wobble position uridine thiolation|0002143||IEA,RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210913.1;locus_tag=AD853_RS07465;product=tRNA 2-thiouridine(34) synthase MnmA;protein_id=WP_038401874.1;transl_table=11 NZ_CPUY01000006.1 RefSeq gene 78122 78748 . + . ID=gene-AD853_RS07470;Name=hflD;gbkey=Gene;gene=hflD;gene_biotype=protein_coding;locus_tag=AD853_RS07470;old_locus_tag=ERS008462_01515 NZ_CPUY01000006.1 Protein Homology CDS 78122 78748 . + 0 ID=cds-WP_002210914.1;Parent=gene-AD853_RS07470;Dbxref=GenBank:WP_002210914.1;Name=WP_002210914.1;gbkey=CDS;gene=hflD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210914.1;locus_tag=AD853_RS07470;product=high frequency lysogenization protein HflD;protein_id=WP_002210914.1;transl_table=11 NZ_CPUY01000006.1 RefSeq gene 78809 80179 . + . ID=gene-AD853_RS07475;Name=purB;gbkey=Gene;gene=purB;gene_biotype=protein_coding;locus_tag=AD853_RS07475;old_locus_tag=ERS008462_01516 NZ_CPUY01000006.1 Protein Homology CDS 78809 80179 . + 0 ID=cds-WP_002230790.1;Parent=gene-AD853_RS07475;Dbxref=GenBank:WP_002230790.1;Name=WP_002230790.1;Ontology_term=GO:0006188,GO:0009152,GO:0004018;gbkey=CDS;gene=purB;go_function=N6-(1%2C2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity|0004018||IEA;go_process=IMP biosynthetic process|0006188||IEA,purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309630.1;locus_tag=AD853_RS07475;product=adenylosuccinate lyase;protein_id=WP_002230790.1;transl_table=11 NZ_CPUY01000006.1 RefSeq gene 80358 80981 . + . ID=gene-AD853_RS07480;Name=AD853_RS07480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS07480;old_locus_tag=ERS008462_01517 NZ_CPUY01000006.1 Protein Homology CDS 80358 80981 . + 0 ID=cds-WP_038824345.1;Parent=gene-AD853_RS07480;Dbxref=GenBank:WP_038824345.1;Name=WP_038824345.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210916.1;locus_tag=AD853_RS07480;product=YPO1635 family putative outer membrane beta-barrel protein;protein_id=WP_038824345.1;transl_table=11 NZ_CPUY01000006.1 RefSeq gene 81192 81863 . + . ID=gene-AD853_RS07485;Name=phoP;gbkey=Gene;gene=phoP;gene_biotype=protein_coding;locus_tag=AD853_RS07485;old_locus_tag=ERS008462_01518 NZ_CPUY01000006.1 Protein Homology CDS 81192 81863 . + 0 ID=cds-WP_002230788.1;Parent=gene-AD853_RS07485;Dbxref=GenBank:WP_002230788.1;Name=WP_002230788.1;gbkey=CDS;gene=phoP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016256924.1;locus_tag=AD853_RS07485;product=two-component system response regulator PhoP;protein_id=WP_002230788.1;transl_table=11 NZ_CPUY01000006.1 RefSeq gene 81869 83323 . + . ID=gene-AD853_RS07490;Name=phoQ;gbkey=Gene;gene=phoQ;gene_biotype=protein_coding;locus_tag=AD853_RS07490;old_locus_tag=ERS008462_01519 NZ_CPUY01000006.1 Protein Homology CDS 81869 83323 . + 0 ID=cds-WP_002210918.1;Parent=gene-AD853_RS07490;Dbxref=GenBank:WP_002210918.1;Name=WP_002210918.1;Ontology_term=GO:0000160,GO:0000155,GO:0004673,GO:0016772;gbkey=CDS;gene=phoQ;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,transferase activity%2C transferring phosphorus-containing groups|0016772||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210918.1;locus_tag=AD853_RS07490;product=two-component system sensor histidine kinase PhoQ;protein_id=WP_002210918.1;transl_table=11 NZ_CPUY01000006.1 RefSeq gene 83407 84528 . + . ID=gene-AD853_RS07495;Name=AD853_RS07495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS07495;old_locus_tag=ERS008462_01520 NZ_CPUY01000006.1 Protein Homology CDS 83407 84528 . + 0 ID=cds-WP_002210919.1;Parent=gene-AD853_RS07495;Dbxref=GenBank:WP_002210919.1;Name=WP_002210919.1;Ontology_term=GO:0043687,GO:0008198,GO:0016706;gbkey=CDS;go_function=ferrous iron binding|0008198||IEA,2-oxoglutarate-dependent dioxygenase activity|0016706||IEA;go_process=post-translational protein modification|0043687||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011816139.1;locus_tag=AD853_RS07495;product=ribosomal protein uL16 3-hydroxylase;protein_id=WP_002210919.1;transl_table=11 NZ_CPUY01000006.1 RefSeq gene 84825 84938 . + . ID=gene-AD853_RS22610;Name=AD853_RS22610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS22610 NZ_CPUY01000006.1 Protein Homology CDS 84825 84938 . + 0 ID=cds-WP_087768149.1;Parent=gene-AD853_RS22610;Dbxref=GenBank:WP_087768149.1;Name=WP_087768149.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002224869.1;locus_tag=AD853_RS22610;product=gluconate 5-dehydrogenase;protein_id=WP_087768149.1;transl_table=11 NZ_CPUY01000006.1 RefSeq gene 84933 86168 . - . ID=gene-AD853_RS07500;Name=pepT;gbkey=Gene;gene=pepT;gene_biotype=protein_coding;locus_tag=AD853_RS07500;old_locus_tag=ERS008462_01521 NZ_CPUY01000006.1 Protein Homology CDS 84933 86168 . - 0 ID=cds-WP_002210920.1;Parent=gene-AD853_RS07500;Dbxref=GenBank:WP_002210920.1;Name=WP_002210920.1;Ontology_term=GO:0006508,GO:0008270,GO:0045148;gbkey=CDS;gene=pepT;go_function=zinc ion binding|0008270||IEA,tripeptide aminopeptidase activity|0045148||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004701588.1;locus_tag=AD853_RS07500;product=peptidase T;protein_id=WP_002210920.1;transl_table=11 NZ_CPUY01000006.1 RefSeq gene 86498 87334 . - . ID=gene-AD853_RS07505;Name=cobB;gbkey=Gene;gene=cobB;gene_biotype=protein_coding;locus_tag=AD853_RS07505;old_locus_tag=ERS008462_01522 NZ_CPUY01000006.1 Protein Homology CDS 86498 87334 . - 0 ID=cds-WP_002210921.1;Parent=gene-AD853_RS07505;Dbxref=GenBank:WP_002210921.1;Name=WP_002210921.1;Ontology_term=GO:0070403;gbkey=CDS;gene=cobB;go_function=NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019079781.1;locus_tag=AD853_RS07505;product=Sir2 family NAD+-dependent deacetylase;protein_id=WP_002210921.1;transl_table=11 NZ_CPUY01000006.1 RefSeq gene 87383 88297 . - . ID=gene-AD853_RS07510;Name=nagK;gbkey=Gene;gene=nagK;gene_biotype=protein_coding;locus_tag=AD853_RS07510;old_locus_tag=ERS008462_01523 NZ_CPUY01000006.1 Protein Homology CDS 87383 88297 . - 0 ID=cds-WP_011192586.1;Parent=gene-AD853_RS07510;Dbxref=GenBank:WP_011192586.1;Name=WP_011192586.1;Ontology_term=GO:0045127;gbkey=CDS;gene=nagK;go_function=N-acetylglucosamine kinase activity|0045127||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005158011.1;locus_tag=AD853_RS07510;product=N-acetylglucosamine kinase;protein_id=WP_011192586.1;transl_table=11 NZ_CPUY01000006.1 RefSeq gene 88316 89563 . - . ID=gene-AD853_RS07515;Name=lolE;gbkey=Gene;gene=lolE;gene_biotype=protein_coding;locus_tag=AD853_RS07515;old_locus_tag=ERS008462_01524 NZ_CPUY01000006.1 Protein Homology CDS 88316 89563 . - 0 ID=cds-WP_038824346.1;Parent=gene-AD853_RS07515;Dbxref=GenBank:WP_038824346.1;Name=WP_038824346.1;Ontology_term=GO:0042953;gbkey=CDS;gene=lolE;go_process=lipoprotein transport|0042953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192587.1;locus_tag=AD853_RS07515;product=lipoprotein-releasing ABC transporter permease subunit LolE;protein_id=WP_038824346.1;transl_table=11 NZ_CPUY01000006.1 RefSeq gene 89563 90267 . - . ID=gene-AD853_RS07520;Name=lolD;gbkey=Gene;gene=lolD;gene_biotype=protein_coding;locus_tag=AD853_RS07520;old_locus_tag=ERS008462_01525 NZ_CPUY01000006.1 Protein Homology CDS 89563 90267 . - 0 ID=cds-WP_002210923.1;Parent=gene-AD853_RS07520;Dbxref=GenBank:WP_002210923.1;Name=WP_002210923.1;Ontology_term=GO:0042953,GO:0005524,GO:0016020;gbkey=CDS;gene=lolD;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA;go_process=lipoprotein transport|0042953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192588.1;locus_tag=AD853_RS07520;product=lipoprotein-releasing ABC transporter ATP-binding protein LolD;protein_id=WP_002210923.1;transl_table=11 NZ_CPUY01000006.1 RefSeq gene 90260 91462 . - . ID=gene-AD853_RS07525;Name=lolC;gbkey=Gene;gene=lolC;gene_biotype=protein_coding;locus_tag=AD853_RS07525;old_locus_tag=ERS008462_01526 NZ_CPUY01000006.1 Protein Homology CDS 90260 91462 . - 0 ID=cds-WP_011192589.1;Parent=gene-AD853_RS07525;Dbxref=GenBank:WP_011192589.1;Name=WP_011192589.1;Ontology_term=GO:0042953,GO:0016020;gbkey=CDS;gene=lolC;go_component=membrane|0016020||IEA;go_process=lipoprotein transport|0042953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004976588.1;locus_tag=AD853_RS07525;product=lipoprotein-releasing ABC transporter permease subunit LolC;protein_id=WP_011192589.1;transl_table=11 NZ_CPUY01000006.1 RefSeq gene 91732 95178 . + . ID=gene-AD853_RS07530;Name=mfd;gbkey=Gene;gene=mfd;gene_biotype=protein_coding;locus_tag=AD853_RS07530;old_locus_tag=ERS008462_01527 NZ_CPUY01000006.1 Protein Homology CDS 91732 95178 . + 0 ID=cds-WP_038824348.1;Parent=gene-AD853_RS07530;Dbxref=GenBank:WP_038824348.1;Name=WP_038824348.1;Ontology_term=GO:0006281,GO:0003676,GO:0003684,GO:0005524;gbkey=CDS;gene=mfd;go_function=nucleic acid binding|0003676||IEA,damaged DNA binding|0003684||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192590.1;locus_tag=AD853_RS07530;product=transcription-repair coupling factor;protein_id=WP_038824348.1;transl_table=11 NZ_CPUY01000006.1 RefSeq gene 95418 95957 . - . ID=gene-AD853_RS07535;Name=AD853_RS07535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS07535;old_locus_tag=ERS008462_01528 NZ_CPUY01000006.1 Protein Homology CDS 95418 95957 . - 0 ID=cds-WP_002210925.1;Parent=gene-AD853_RS07535;Dbxref=GenBank:WP_002210925.1;Name=WP_002210925.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210925.1;locus_tag=AD853_RS07535;product=glycine zipper 2TM domain-containing protein;protein_id=WP_002210925.1;transl_table=11 NZ_CPUY01000006.1 RefSeq gene 96268 96681 . - . ID=gene-AD853_RS07540;Name=AD853_RS07540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS07540;old_locus_tag=ERS008462_01529 NZ_CPUY01000006.1 Protein Homology CDS 96268 96681 . - 0 ID=cds-WP_002213101.1;Parent=gene-AD853_RS07540;Dbxref=GenBank:WP_002213101.1;Name=WP_002213101.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012104974.1;locus_tag=AD853_RS07540;product=hypothetical protein;protein_id=WP_002213101.1;transl_table=11 NZ_CPUY01000006.1 RefSeq gene 96689 97258 . - . ID=gene-AD853_RS07545;Name=AD853_RS07545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS07545;old_locus_tag=ERS008462_01530 NZ_CPUY01000006.1 Protein Homology CDS 96689 97258 . - 0 ID=cds-WP_002215856.1;Parent=gene-AD853_RS07545;Dbxref=GenBank:WP_002215856.1;Name=WP_002215856.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002215856.1;locus_tag=AD853_RS07545;product=hypothetical protein;protein_id=WP_002215856.1;transl_table=11 NZ_CPUY01000006.1 RefSeq gene 97793 99097 . - . ID=gene-AD853_RS07550;Name=AD853_RS07550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS07550;old_locus_tag=ERS008462_01531 NZ_CPUY01000006.1 Protein Homology CDS 97793 99097 . - 0 ID=cds-WP_002213097.1;Parent=gene-AD853_RS07550;Dbxref=GenBank:WP_002213097.1;Name=WP_002213097.1;Ontology_term=GO:0006116,GO:0003954;gbkey=CDS;go_function=NADH dehydrogenase activity|0003954||IEA;go_process=obsolete NADH oxidation|0006116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015683597.1;locus_tag=AD853_RS07550;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_002213097.1;transl_table=11 NZ_CPUY01000006.1 RefSeq gene 99471 100013 . - . ID=gene-AD853_RS07555;Name=ycfP;gbkey=Gene;gene=ycfP;gene_biotype=protein_coding;locus_tag=AD853_RS07555;old_locus_tag=ERS008462_01532 NZ_CPUY01000006.1 Protein Homology CDS 99471 100013 . - 0 ID=cds-WP_002213095.1;Parent=gene-AD853_RS07555;Dbxref=GenBank:WP_002213095.1;Name=WP_002213095.1;gbkey=CDS;gene=ycfP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460180.1;locus_tag=AD853_RS07555;product=alpha/beta hydrolase YcfP;protein_id=WP_002213095.1;transl_table=11 NZ_CPUY01000006.1 RefSeq gene 100141 101160 . - . ID=gene-AD853_RS07560;Name=nagZ;gbkey=Gene;gene=nagZ;gene_biotype=protein_coding;locus_tag=AD853_RS07560;old_locus_tag=ERS008462_01533 NZ_CPUY01000006.1 Protein Homology CDS 100141 101160 . - 0 ID=cds-WP_038401407.1;Parent=gene-AD853_RS07560;Dbxref=GenBank:WP_038401407.1;Name=WP_038401407.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;gene=nagZ;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002215854.1;locus_tag=AD853_RS07560;product=beta-N-acetylhexosaminidase;protein_id=WP_038401407.1;transl_table=11 NZ_CPUY01000006.1 RefSeq gene 101243 102109 . - . ID=gene-AD853_RS07565;Name=thiK;gbkey=Gene;gene=thiK;gene_biotype=protein_coding;locus_tag=AD853_RS07565;old_locus_tag=ERS008462_01534 NZ_CPUY01000006.1 Protein Homology CDS 101243 102109 . - 0 ID=cds-WP_002213090.1;Parent=gene-AD853_RS07565;Dbxref=GenBank:WP_002213090.1;Name=WP_002213090.1;Ontology_term=GO:0009228,GO:0016310,GO:0019165;gbkey=CDS;gene=thiK;go_function=thiamine kinase activity|0019165||IEA;go_process=thiamine biosynthetic process|0009228||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002213090.1;locus_tag=AD853_RS07565;product=thiamine kinase;protein_id=WP_002213090.1;transl_table=11 NZ_CPUY01000006.1 RefSeq gene 102090 102665 . - . ID=gene-AD853_RS07570;Name=lpoB;gbkey=Gene;gene=lpoB;gene_biotype=protein_coding;locus_tag=AD853_RS07570;old_locus_tag=ERS008462_01535 NZ_CPUY01000006.1 Protein Homology CDS 102090 102665 . - 0 ID=cds-WP_038824350.1;Parent=gene-AD853_RS07570;Dbxref=GenBank:WP_038824350.1;Name=WP_038824350.1;gbkey=CDS;gene=lpoB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192593.1;locus_tag=AD853_RS07570;product=penicillin-binding protein activator LpoB;protein_id=WP_038824350.1;transl_table=11 NZ_CPUY01000006.1 RefSeq gene 102706 103095 . - . ID=gene-AD853_RS07575;Name=AD853_RS07575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS07575;old_locus_tag=ERS008462_01536 NZ_CPUY01000006.1 Protein Homology CDS 102706 103095 . - 0 ID=cds-WP_002213088.1;Parent=gene-AD853_RS07575;Dbxref=GenBank:WP_002213088.1;Name=WP_002213088.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012303975.1;locus_tag=AD853_RS07575;product=YcfL family protein;protein_id=WP_002213088.1;transl_table=11 NZ_CPUY01000006.1 RefSeq gene 103130 103483 . - . ID=gene-AD853_RS07580;Name=hinT;gbkey=Gene;gene=hinT;gene_biotype=protein_coding;locus_tag=AD853_RS07580;old_locus_tag=ERS008462_01537 NZ_CPUY01000006.1 Protein Homology CDS 103130 103483 . - 0 ID=cds-WP_002213087.1;Parent=gene-AD853_RS07580;Dbxref=GenBank:WP_002213087.1;Name=WP_002213087.1;gbkey=CDS;gene=hinT;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002213087.1;locus_tag=AD853_RS07580;product=purine nucleoside phosphoramidase;protein_id=WP_002213087.1;transl_table=11 NZ_CPUY01000006.1 RefSeq gene 103657 104475 . - . ID=gene-AD853_RS07585;Name=AD853_RS07585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS07585;old_locus_tag=ERS008462_01538 NZ_CPUY01000006.1 Protein Homology CDS 103657 104475 . - 0 ID=cds-WP_002215853.1;Parent=gene-AD853_RS07585;Dbxref=GenBank:WP_002215853.1;Name=WP_002215853.1;Ontology_term=GO:0004764;gbkey=CDS;go_function=shikimate 3-dehydrogenase (NADP+) activity|0004764||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005273077.1;locus_tag=AD853_RS07585;product=shikimate 5-dehydrogenase;protein_id=WP_002215853.1;transl_table=11 NZ_CPUY01000006.1 RefSeq gene 104855 106288 . - . ID=gene-AD853_RS07590;Name=ptsG;gbkey=Gene;gene=ptsG;gene_biotype=protein_coding;locus_tag=AD853_RS07590;old_locus_tag=ERS008462_01539 NZ_CPUY01000006.1 Protein Homology CDS 104855 106288 . - 0 ID=cds-WP_011192602.1;Parent=gene-AD853_RS07590;Dbxref=GenBank:WP_011192602.1;Name=WP_011192602.1;Ontology_term=GO:0009401,GO:1904659,GO:0008982,GO:0055056;gbkey=CDS;gene=ptsG;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA,D-glucose transmembrane transporter activity|0055056||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,D-glucose transmembrane transport|1904659||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000475716.1;locus_tag=AD853_RS07590;product=PTS glucose transporter subunit IIBC;protein_id=WP_011192602.1;transl_table=11 NZ_CPUY01000006.1 RefSeq gene 106594 107403 . - . ID=gene-AD853_RS07595;Name=AD853_RS07595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS07595;old_locus_tag=ERS008462_01540 NZ_CPUY01000006.1 Protein Homology CDS 106594 107403 . - 0 ID=cds-WP_002213084.1;Parent=gene-AD853_RS07595;Dbxref=GenBank:WP_002213084.1;Name=WP_002213084.1;Ontology_term=GO:0016788;gbkey=CDS;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015683960.1;locus_tag=AD853_RS07595;product=metal-dependent hydrolase;protein_id=WP_002213084.1;transl_table=11 NZ_CPUY01000006.1 RefSeq gene 107418 108440 . - . ID=gene-AD853_RS07600;Name=holB;gbkey=Gene;gene=holB;gene_biotype=protein_coding;locus_tag=AD853_RS07600;old_locus_tag=ERS008462_01541 NZ_CPUY01000006.1 Protein Homology CDS 107418 108440 . - 0 ID=cds-WP_002213083.1;Parent=gene-AD853_RS07600;Dbxref=GenBank:WP_002213083.1;Name=WP_002213083.1;Ontology_term=GO:0006260,GO:0003887,GO:0008408;gbkey=CDS;gene=holB;go_function=DNA-directed DNA polymerase activity|0003887||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012104969.1;locus_tag=AD853_RS07600;product=DNA polymerase III subunit delta';protein_id=WP_002213083.1;transl_table=11 NZ_CPUY01000006.1 RefSeq gene 108440 109078 . - . ID=gene-AD853_RS07605;Name=tmk;gbkey=Gene;gene=tmk;gene_biotype=protein_coding;locus_tag=AD853_RS07605;old_locus_tag=ERS008462_01542 NZ_CPUY01000006.1 Protein Homology CDS 108440 109078 . - 0 ID=cds-WP_012303974.1;Parent=gene-AD853_RS07605;Dbxref=GenBank:WP_012303974.1;Name=WP_012303974.1;Ontology_term=GO:0006233,GO:0004798,GO:0005524;gbkey=CDS;gene=tmk;go_function=dTMP kinase activity|0004798||IEA,ATP binding|0005524||IEA;go_process=dTDP biosynthetic process|0006233||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002213082.1;locus_tag=AD853_RS07605;product=dTMP kinase;protein_id=WP_012303974.1;transl_table=11 NZ_CPUY01000006.1 RefSeq gene 109068 110093 . - . ID=gene-AD853_RS07610;Name=mltG;gbkey=Gene;gene=mltG;gene_biotype=protein_coding;locus_tag=AD853_RS07610;old_locus_tag=ERS008462_01543 NZ_CPUY01000006.1 Protein Homology CDS 109068 110093 . - 0 ID=cds-WP_038824351.1;Parent=gene-AD853_RS07610;Dbxref=GenBank:WP_038824351.1;Name=WP_038824351.1;Ontology_term=GO:0009252,GO:0071555,GO:0008932;gbkey=CDS;gene=mltG;go_function=lytic endotransglycosylase activity|0008932||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002217396.1;locus_tag=AD853_RS07610;product=endolytic transglycosylase MltG;protein_id=WP_038824351.1;transl_table=11 NZ_CPUY01000006.1 RefSeq pseudogene 110258 110326 . + . ID=gene-AD853_RS22115;Name=AD853_RS22115;end_range=110326,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD853_RS22115;partial=true;pseudo=true NZ_CPUY01000006.1 Protein Homology CDS 110258 110326 . + 0 ID=cds-AD853_RS22115;Parent=gene-AD853_RS22115;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=110326,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002378124.1;locus_tag=AD853_RS22115;partial=true;product=gluconate 5-dehydrogenase;pseudo=true;transl_table=11 NZ_CPUY01000006.1 RefSeq gene 110362 111168 . - . ID=gene-AD853_RS07615;Name=pabC;gbkey=Gene;gene=pabC;gene_biotype=protein_coding;locus_tag=AD853_RS07615;old_locus_tag=ERS008462_01544 NZ_CPUY01000006.1 Protein Homology CDS 110362 111168 . - 0 ID=cds-WP_011192606.1;Parent=gene-AD853_RS07615;Dbxref=GenBank:WP_011192606.1;Name=WP_011192606.1;Ontology_term=GO:0046656,GO:0008696,GO:0030170;gbkey=CDS;gene=pabC;go_function=4-amino-4-deoxychorismate lyase activity|0008696||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=folic acid biosynthetic process|0046656||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002213080.1;locus_tag=AD853_RS07615;product=aminodeoxychorismate lyase;protein_id=WP_011192606.1;transl_table=11 NZ_CPUY01000006.1 RefSeq gene 111531 112772 . - . ID=gene-AD853_RS07620;Name=fabF;gbkey=Gene;gene=fabF;gene_biotype=protein_coding;locus_tag=AD853_RS07620;old_locus_tag=ERS008462_01545 NZ_CPUY01000006.1 Protein Homology CDS 111531 112772 . - 0 ID=cds-WP_002213079.1;Parent=gene-AD853_RS07620;Dbxref=GenBank:WP_002213079.1;Name=WP_002213079.1;Ontology_term=GO:0006633,GO:0004315;gbkey=CDS;gene=fabF;go_function=3-oxoacyl-[acyl-carrier-protein] synthase activity|0004315||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309500.1;locus_tag=AD853_RS07620;product=beta-ketoacyl-ACP synthase II;protein_id=WP_002213079.1;transl_table=11 NZ_CPUY01000006.1 RefSeq gene 112867 113103 . - . ID=gene-AD853_RS07625;Name=acpP;gbkey=Gene;gene=acpP;gene_biotype=protein_coding;locus_tag=AD853_RS07625;old_locus_tag=ERS008462_01546 NZ_CPUY01000006.1 Protein Homology CDS 112867 113103 . - 0 ID=cds-WP_002220787.1;Parent=gene-AD853_RS07625;Dbxref=GenBank:WP_002220787.1;Name=WP_002220787.1;Ontology_term=GO:0006633;gbkey=CDS;gene=acpP;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016940845.1;locus_tag=AD853_RS07625;product=acyl carrier protein;protein_id=WP_002220787.1;transl_table=11 NZ_CPUY01000006.1 RefSeq gene 113257 113991 . - . ID=gene-AD853_RS07630;Name=fabG;gbkey=Gene;gene=fabG;gene_biotype=protein_coding;locus_tag=AD853_RS07630;old_locus_tag=ERS008462_01547 NZ_CPUY01000006.1 Protein Homology CDS 113257 113991 . - 0 ID=cds-WP_002210935.1;Parent=gene-AD853_RS07630;Dbxref=GenBank:WP_002210935.1;Name=WP_002210935.1;Ontology_term=GO:0006633,GO:0004316,GO:0051287;gbkey=CDS;gene=fabG;go_function=3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity|0004316||IEA,NAD binding|0051287||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129017.1;locus_tag=AD853_RS07630;product=3-oxoacyl-ACP reductase FabG;protein_id=WP_002210935.1;transl_table=11 NZ_CPUY01000006.1 RefSeq gene 114005 114934 . - . ID=gene-AD853_RS07635;Name=fabD;gbkey=Gene;gene=fabD;gene_biotype=protein_coding;locus_tag=AD853_RS07635;old_locus_tag=ERS008462_01548 NZ_CPUY01000006.1 Protein Homology CDS 114005 114934 . - 0 ID=cds-WP_002210934.1;Parent=gene-AD853_RS07635;Dbxref=GenBank:WP_002210934.1;Name=WP_002210934.1;Ontology_term=GO:0006633,GO:0004314;gbkey=CDS;gene=fabD;go_function=[acyl-carrier-protein] S-malonyltransferase activity|0004314||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012104963.1;locus_tag=AD853_RS07635;product=ACP S-malonyltransferase;protein_id=WP_002210934.1;transl_table=11 NZ_CPUY01000006.1 RefSeq gene 114972 115922 . - . ID=gene-AD853_RS07640;Name=AD853_RS07640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS07640;old_locus_tag=ERS008462_01549 NZ_CPUY01000006.1 Protein Homology CDS 114972 115922 . - 0 ID=cds-WP_002210933.1;Parent=gene-AD853_RS07640;Dbxref=GenBank:WP_002210933.1;Name=WP_002210933.1;Ontology_term=GO:0006633,GO:0004315,GO:0016746,GO:0033818;gbkey=CDS;go_function=3-oxoacyl-[acyl-carrier-protein] synthase activity|0004315||IEA,acyltransferase activity|0016746||IEA,beta-ketoacyl-acyl-carrier-protein synthase III activity|0033818||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210933.1;locus_tag=AD853_RS07640;product=beta-ketoacyl-ACP synthase III;protein_id=WP_002210933.1;transl_table=11 NZ_CPUY01000006.1 RefSeq gene 115929 116963 . - . ID=gene-AD853_RS07645;Name=plsX;gbkey=Gene;gene=plsX;gene_biotype=protein_coding;locus_tag=AD853_RS07645;old_locus_tag=ERS008462_01550 NZ_CPUY01000006.1 Protein Homology CDS 115929 116963 . - 0 ID=cds-WP_002210932.1;Parent=gene-AD853_RS07645;Dbxref=GenBank:WP_002210932.1;Name=WP_002210932.1;Ontology_term=GO:0008610,GO:0043811;gbkey=CDS;gene=plsX;go_function=phosphate:acyl-[acyl carrier protein] acyltransferase activity|0043811||IEA;go_process=lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210932.1;locus_tag=AD853_RS07645;product=phosphate acyltransferase PlsX;protein_id=WP_002210932.1;transl_table=11 NZ_CPUY01000006.1 RefSeq gene 116997 117164 . - . ID=gene-AD853_RS07650;Name=rpmF;gbkey=Gene;gene=rpmF;gene_biotype=protein_coding;locus_tag=AD853_RS07650;old_locus_tag=ERS008462_01551 NZ_CPUY01000006.1 Protein Homology CDS 116997 117164 . - 0 ID=cds-WP_002210931.1;Parent=gene-AD853_RS07650;Dbxref=GenBank:WP_002210931.1;Name=WP_002210931.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rpmF;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013576249.1;locus_tag=AD853_RS07650;product=50S ribosomal protein L32;protein_id=WP_002210931.1;transl_table=11 NZ_CPUY01000006.1 RefSeq gene 117177 117701 . - . ID=gene-AD853_RS07655;Name=yceD;gbkey=Gene;gene=yceD;gene_biotype=protein_coding;locus_tag=AD853_RS07655;old_locus_tag=ERS008462_01552 NZ_CPUY01000006.1 Protein Homology CDS 117177 117701 . - 0 ID=cds-WP_038823651.1;Parent=gene-AD853_RS07655;Dbxref=GenBank:WP_038823651.1;Name=WP_038823651.1;gbkey=CDS;gene=yceD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005273034.1;locus_tag=AD853_RS07655;product=23S rRNA accumulation protein YceD;protein_id=WP_038823651.1;transl_table=11 NZ_CPUY01000006.1 RefSeq gene 117843 118439 . + . ID=gene-AD853_RS07660;Name=AD853_RS07660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS07660;old_locus_tag=ERS008462_01553 NZ_CPUY01000006.1 Protein Homology CDS 117843 118439 . + 0 ID=cds-WP_038823650.1;Parent=gene-AD853_RS07660;Dbxref=GenBank:WP_038823650.1;Name=WP_038823650.1;Ontology_term=GO:0009117,GO:0009146,GO:0000166,GO:0047429;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,nucleoside triphosphate diphosphatase activity|0047429||IEA;go_process=nucleotide metabolic process|0009117||IEA,purine nucleoside triphosphate catabolic process|0009146||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210928.1;locus_tag=AD853_RS07660;product=Maf family protein;protein_id=WP_038823650.1;transl_table=11 NZ_CPUY01000006.1 RefSeq gene 118562 119524 . - . ID=gene-AD853_RS07665;Name=rluC;gbkey=Gene;gene=rluC;gene_biotype=protein_coding;locus_tag=AD853_RS07665;old_locus_tag=ERS008462_01554 NZ_CPUY01000006.1 Protein Homology CDS 118562 119524 . - 0 ID=cds-WP_038823656.1;Parent=gene-AD853_RS07665;Dbxref=GenBank:WP_038823656.1;Name=WP_038823656.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;gene=rluC;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192608.1;locus_tag=AD853_RS07665;product=23S rRNA pseudouridine(955/2504/2580) synthase RluC;protein_id=WP_038823656.1;transl_table=11 NZ_CPUY01000006.1 RefSeq gene 120099 123749 . + . ID=gene-AD853_RS07670;Name=rne;gbkey=Gene;gene=rne;gene_biotype=protein_coding;locus_tag=AD853_RS07670;old_locus_tag=ERS008462_01556 NZ_CPUY01000006.1 Protein Homology CDS 120099 123749 . + 0 ID=cds-WP_072080785.1;Parent=gene-AD853_RS07670;Dbxref=GenBank:WP_072080785.1;Name=WP_072080785.1;Ontology_term=GO:0006396,GO:0003723,GO:0008995;gbkey=CDS;gene=rne;go_function=RNA binding|0003723||IEA,ribonuclease E activity|0008995||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210926.1;locus_tag=AD853_RS07670;product=ribonuclease E;protein_id=WP_072080785.1;transl_table=11 NZ_CPUY01000006.1 RefSeq pseudogene 123797 123940 . - . ID=gene-AD853_RS20425;Name=AD853_RS20425;end_range=123940,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD853_RS20425;partial=true;pseudo=true NZ_CPUY01000006.1 Protein Homology CDS 123797 123940 . - 0 ID=cds-AD853_RS20425;Parent=gene-AD853_RS20425;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0015074;end_range=123940,.;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611350.1;locus_tag=AD853_RS20425;partial=true;product=IS3 family transposase;pseudo=true;transl_table=11 NZ_CPUY01000006.1 RefSeq gene 124007 124294 . - . ID=gene-AD853_RS07675;Name=AD853_RS07675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS07675;old_locus_tag=ERS008462_01557 NZ_CPUY01000006.1 Protein Homology CDS 124007 124294 . - 0 ID=cds-WP_002213107.1;Parent=gene-AD853_RS07675;Dbxref=GenBank:WP_002213107.1;Name=WP_002213107.1;Ontology_term=GO:0017000,GO:0004497,GO:0016491;gbkey=CDS;go_function=monooxygenase activity|0004497||IEA,oxidoreductase activity|0016491||IEA;go_process=antibiotic biosynthetic process|0017000||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002213107.1;locus_tag=AD853_RS07675;product=putative quinol monooxygenase;protein_id=WP_002213107.1;transl_table=11 NZ_CPUY01000006.1 RefSeq gene 124529 125575 . + . ID=gene-AD853_RS07680;Name=pyrC;gbkey=Gene;gene=pyrC;gene_biotype=protein_coding;locus_tag=AD853_RS07680;old_locus_tag=ERS008462_01558 NZ_CPUY01000006.1 Protein Homology CDS 124529 125575 . + 0 ID=cds-WP_012104959.1;Parent=gene-AD853_RS07680;Dbxref=GenBank:WP_012104959.1;Name=WP_012104959.1;Ontology_term=GO:0019856,GO:0004151;gbkey=CDS;gene=pyrC;go_function=dihydroorotase activity|0004151||IEA;go_process=pyrimidine nucleobase biosynthetic process|0019856||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192610.1;locus_tag=AD853_RS07680;product=dihydroorotase;protein_id=WP_012104959.1;transl_table=11 NZ_CPUY01000006.1 RefSeq gene 125888 126133 . + . ID=gene-AD853_RS07685;Name=dinI;gbkey=Gene;gene=dinI;gene_biotype=protein_coding;locus_tag=AD853_RS07685;old_locus_tag=ERS008462_01559 NZ_CPUY01000006.1 Protein Homology CDS 125888 126133 . + 0 ID=cds-WP_002213110.1;Parent=gene-AD853_RS07685;Dbxref=GenBank:WP_002213110.1;Name=WP_002213110.1;gbkey=CDS;gene=dinI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004709658.1;locus_tag=AD853_RS07685;product=DNA damage-inducible protein I;protein_id=WP_002213110.1;transl_table=11 NZ_CPUY01000006.1 RefSeq gene 126639 126893 . + . ID=gene-AD853_RS07695;Name=bssS;gbkey=Gene;gene=bssS;gene_biotype=protein_coding;locus_tag=AD853_RS07695;old_locus_tag=ERS008462_01560 NZ_CPUY01000006.1 Protein Homology CDS 126639 126893 . + 0 ID=cds-WP_011192611.1;Parent=gene-AD853_RS07695;Dbxref=GenBank:WP_011192611.1;Name=WP_011192611.1;gbkey=CDS;gene=bssS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004927812.1;locus_tag=AD853_RS07695;product=biofilm formation regulator BssS;protein_id=WP_011192611.1;transl_table=11 NZ_CPUY01000006.1 RefSeq gene 127144 128259 . + . ID=gene-AD853_RS07700;Name=solA;gbkey=Gene;gene=solA;gene_biotype=protein_coding;locus_tag=AD853_RS07700;old_locus_tag=ERS008462_01561 NZ_CPUY01000006.1 Protein Homology CDS 127144 128259 . + 0 ID=cds-WP_038823647.1;Parent=gene-AD853_RS07700;Dbxref=GenBank:WP_038823647.1;Name=WP_038823647.1;Ontology_term=GO:0050131;gbkey=CDS;gene=solA;go_function=N-methyl-L-amino-acid oxidase activity|0050131||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211850.1;locus_tag=AD853_RS07700;product=N-methyl-L-tryptophan oxidase;protein_id=WP_038823647.1;transl_table=11 NZ_CPUY01000006.1 RefSeq gene 128526 129110 . + . ID=gene-AD853_RS07705;Name=AD853_RS07705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS07705;old_locus_tag=ERS008462_01562 NZ_CPUY01000006.1 Protein Homology CDS 128526 129110 . + 0 ID=cds-WP_002230951.1;Parent=gene-AD853_RS07705;Dbxref=GenBank:WP_002230951.1;Name=WP_002230951.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211851.1;locus_tag=AD853_RS07705;product=response regulator transcription factor;protein_id=WP_002230951.1;transl_table=11 NZ_CPUY01000006.1 RefSeq gene 129475 129567 . + . ID=gene-AD853_RS20430;Name=AD853_RS20430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS20430 NZ_CPUY01000006.1 Protein Homology CDS 129475 129567 . + 0 ID=cds-WP_086017986.1;Parent=gene-AD853_RS20430;Dbxref=GenBank:WP_086017986.1;Name=WP_086017986.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022421.6;locus_tag=AD853_RS20430;product=DUF2770 family protein;protein_id=WP_086017986.1;transl_table=11 NZ_CPUY01000006.1 RefSeq gene 129682 130740 . - . ID=gene-AD853_RS07710;Name=AD853_RS07710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS07710;old_locus_tag=ERS008462_01563 NZ_CPUY01000006.1 Protein Homology CDS 129682 130740 . - 0 ID=cds-WP_002211853.1;Parent=gene-AD853_RS07710;Dbxref=GenBank:WP_002211853.1;Name=WP_002211853.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211853.1;locus_tag=AD853_RS07710;product=AI-2E family transporter;protein_id=WP_002211853.1;transl_table=11 NZ_CPUY01000006.1 RefSeq gene 130889 131956 . - . ID=gene-AD853_RS07715;Name=trhO;gbkey=Gene;gene=trhO;gene_biotype=protein_coding;gene_synonym=yceA;locus_tag=AD853_RS07715;old_locus_tag=ERS008462_01564 NZ_CPUY01000006.1 Protein Homology CDS 130889 131956 . - 0 ID=cds-WP_002211854.1;Parent=gene-AD853_RS07715;Dbxref=GenBank:WP_002211854.1;Name=WP_002211854.1;Ontology_term=GO:0006400;gbkey=CDS;gene=trhO;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211854.1;locus_tag=AD853_RS07715;product=oxygen-dependent tRNA uridine(34) hydroxylase TrhO;protein_id=WP_002211854.1;transl_table=11 NZ_CPUY01000006.1 RefSeq gene 132315 132479 . - . ID=gene-AD853_RS21765;Name=AD853_RS21765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS21765;old_locus_tag=ERS008462_01565 NZ_CPUY01000006.1 Protein Homology CDS 132315 132479 . - 0 ID=cds-WP_038823655.1;Parent=gene-AD853_RS21765;Dbxref=GenBank:WP_038823655.1;Name=WP_038823655.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211856.1;locus_tag=AD853_RS21765;product=hypothetical protein;protein_id=WP_038823655.1;transl_table=11 NZ_CPUY01000006.1 RefSeq gene 133420 134340 . + . ID=gene-AD853_RS07735;Name=AD853_RS07735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS07735;old_locus_tag=ERS008462_01566 NZ_CPUY01000006.1 Protein Homology CDS 133420 134340 . + 0 ID=cds-WP_012104957.1;Parent=gene-AD853_RS07735;Dbxref=GenBank:WP_012104957.1;Name=WP_012104957.1;Ontology_term=GO:0036104,GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;go_process=Kdo2-lipid A biosynthetic process|0036104||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005157882.1;locus_tag=AD853_RS07735;product=Kdo(2)-lipid IV(A) acyltransferase;protein_id=WP_012104957.1;transl_table=11 NZ_CPUY01000006.1 RefSeq gene 135037 136575 . + . ID=gene-AD853_RS07740;Name=AD853_RS07740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS07740;old_locus_tag=ERS008462_01567 NZ_CPUY01000006.1 Protein Homology CDS 135037 136575 . + 0 ID=cds-WP_011192613.1;Parent=gene-AD853_RS07740;Dbxref=GenBank:WP_011192613.1;Name=WP_011192613.1;Ontology_term=GO:0015833,GO:0055085,GO:0022857,GO:1904680,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA,peptide transmembrane transporter activity|1904680||IEA;go_process=peptide transport|0015833||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011816066.1;locus_tag=AD853_RS07740;product=peptide MFS transporter;protein_id=WP_011192613.1;transl_table=11 NZ_CPUY01000006.1 RefSeq gene 136771 137004 . - . ID=gene-AD853_RS07745;Name=AD853_RS07745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS07745;old_locus_tag=ERS008462_01568 NZ_CPUY01000006.1 Protein Homology CDS 136771 137004 . - 0 ID=cds-WP_032466681.1;Parent=gene-AD853_RS07745;Dbxref=GenBank:WP_032466681.1;Name=WP_032466681.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004713252.1;locus_tag=AD853_RS07745;product=YceK/YidQ family lipoprotein;protein_id=WP_032466681.1;transl_table=11 NZ_CPUY01000006.1 RefSeq gene 137136 139745 . - . ID=gene-AD853_RS07750;Name=mdoH;gbkey=Gene;gene=mdoH;gene_biotype=protein_coding;locus_tag=AD853_RS07750;old_locus_tag=ERS008462_01569 NZ_CPUY01000006.1 Protein Homology CDS 137136 139745 . - 0 ID=cds-WP_050124584.1;Parent=gene-AD853_RS07750;Dbxref=GenBank:WP_050124584.1;Name=WP_050124584.1;Ontology_term=GO:0016758;gbkey=CDS;gene=mdoH;go_function=hexosyltransferase activity|0016758||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012413787.1;locus_tag=AD853_RS07750;product=glucans biosynthesis glucosyltransferase MdoH;protein_id=WP_050124584.1;transl_table=11 NZ_CPUY01000006.1 RefSeq gene 139738 141273 . - . ID=gene-AD853_RS07755;Name=AD853_RS07755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS07755;old_locus_tag=ERS008462_01570 NZ_CPUY01000006.1 Protein Homology CDS 139738 141273 . - 0 ID=cds-WP_190947788.1;Parent=gene-AD853_RS07755;Dbxref=GenBank:WP_190947788.1;Name=WP_190947788.1;Ontology_term=GO:0009250,GO:0030246;gbkey=CDS;go_function=carbohydrate binding|0030246||IEA;go_process=glucan biosynthetic process|0009250||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012104954.1;locus_tag=AD853_RS07755;product=glucan biosynthesis protein G;protein_id=WP_190947788.1;transl_table=11 NZ_CPUY01000006.1 RefSeq pseudogene 141651 142547 . + . ID=gene-AD853_RS22120;Name=AD853_RS22120;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD853_RS22120;pseudo=true NZ_CPUY01000006.1 Protein Homology CDS 141651 142547 . + 0 ID=cds-AD853_RS22120;Parent=gene-AD853_RS22120;Note=frameshifted%3B internal stop;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010617292.1;locus_tag=AD853_RS22120;product=acyltransferase family protein;pseudo=true;transl_table=11 NZ_CPUY01000006.1 RefSeq gene 142753 142998 . + . ID=gene-AD853_RS07760;Name=AD853_RS07760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS07760;old_locus_tag=ERS008462_01571 NZ_CPUY01000006.1 Protein Homology CDS 142753 142998 . + 0 ID=cds-WP_011192617.1;Parent=gene-AD853_RS07760;Dbxref=GenBank:WP_011192617.1;Name=WP_011192617.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005166542.1;locus_tag=AD853_RS07760;product=hypothetical protein;protein_id=WP_011192617.1;transl_table=11 NZ_CPUY01000006.1 RefSeq gene 143342 145069 . + . ID=gene-AD853_RS07765;Name=AD853_RS07765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS07765;old_locus_tag=ERS008462_01572 NZ_CPUY01000006.1 Protein Homology CDS 143342 145069 . + 0 ID=cds-WP_011192618.1;Parent=gene-AD853_RS07765;Dbxref=GenBank:WP_011192618.1;Name=WP_011192618.1;Ontology_term=GO:0006813,GO:0006884,GO:0055085,GO:0051139,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=metal cation:proton antiporter activity|0051139||IEA;go_process=potassium ion transport|0006813||IEA,cell volume homeostasis|0006884||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005160140.1;locus_tag=AD853_RS07765;product=potassium/proton antiporter;protein_id=WP_011192618.1;transl_table=11 NZ_CPUY01000006.1 RefSeq gene 145201 146127 . - . ID=gene-AD853_RS07770;Name=AD853_RS07770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS07770;old_locus_tag=ERS008462_01573 NZ_CPUY01000006.1 Protein Homology CDS 145201 146127 . - 0 ID=cds-WP_038823643.1;Parent=gene-AD853_RS07770;Dbxref=GenBank:WP_038823643.1;Name=WP_038823643.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192619.1;locus_tag=AD853_RS07770;product=DMT family transporter;protein_id=WP_038823643.1;transl_table=11 NZ_CPUY01000006.1 RefSeq gene 146558 147202 . + . ID=gene-AD853_RS07775;Name=AD853_RS07775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS07775;old_locus_tag=ERS008462_01574 NZ_CPUY01000006.1 Protein Homology CDS 146558 147202 . + 0 ID=cds-WP_038823641.1;Parent=gene-AD853_RS07775;Dbxref=GenBank:WP_038823641.1;Name=WP_038823641.1;Ontology_term=GO:0016740;gbkey=CDS;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211858.1;locus_tag=AD853_RS07775;product=acyl-homoserine-lactone synthase;protein_id=WP_038823641.1;transl_table=11 NZ_CPUY01000006.1 RefSeq gene 147195 147932 . - . ID=gene-AD853_RS07780;Name=AD853_RS07780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS07780;old_locus_tag=ERS008462_01575 NZ_CPUY01000006.1 Protein Homology CDS 147195 147932 . - 0 ID=cds-WP_038823639.1;Parent=gene-AD853_RS07780;Dbxref=GenBank:WP_038823639.1;Name=WP_038823639.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016583177.1;locus_tag=AD853_RS07780;product=helix-turn-helix transcriptional regulator;protein_id=WP_038823639.1;transl_table=11 NZ_CPUY01000006.1 RefSeq gene 148418 149344 . - . ID=gene-AD853_RS07785;Name=AD853_RS07785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS07785;old_locus_tag=ERS008462_01576 NZ_CPUY01000006.1 Protein Homology CDS 148418 149344 . - 0 ID=cds-WP_038823638.1;Parent=gene-AD853_RS07785;Dbxref=GenBank:WP_038823638.1;Name=WP_038823638.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211861.1;locus_tag=AD853_RS07785;product=LysR family transcriptional regulator;protein_id=WP_038823638.1;transl_table=11 NZ_CPUY01000006.1 RefSeq gene 149792 151150 . + . ID=gene-AD853_RS07795;Name=AD853_RS07795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS07795;old_locus_tag=ERS008462_01578 NZ_CPUY01000006.1 Protein Homology CDS 149792 151150 . + 0 ID=cds-WP_038823637.1;Parent=gene-AD853_RS07795;Dbxref=GenBank:WP_038823637.1;Name=WP_038823637.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192621.1;locus_tag=AD853_RS07795;product=MFS transporter;protein_id=WP_038823637.1;transl_table=11 NZ_CPUY01000006.1 RefSeq gene 151197 151700 . + . ID=gene-AD853_RS07800;Name=fae;gbkey=Gene;gene=fae;gene_biotype=protein_coding;locus_tag=AD853_RS07800;old_locus_tag=ERS008462_01579 NZ_CPUY01000006.1 Protein Homology CDS 151197 151700 . + 0 ID=cds-WP_011192622.1;Parent=gene-AD853_RS07800;Dbxref=GenBank:WP_011192622.1;Name=WP_011192622.1;Ontology_term=GO:0016051,GO:0016840;gbkey=CDS;gene=fae;go_function=carbon-nitrogen lyase activity|0016840||IEA;go_process=carbohydrate biosynthetic process|0016051||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211864.1;locus_tag=AD853_RS07800;product=formaldehyde-activating enzyme;protein_id=WP_011192622.1;transl_table=11 NZ_CPUY01000006.1 RefSeq gene 151711 152730 . + . ID=gene-AD853_RS07805;Name=AD853_RS07805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS07805;old_locus_tag=ERS008462_01580 NZ_CPUY01000006.1 Protein Homology CDS 151711 152730 . + 0 ID=cds-WP_012104947.1;Parent=gene-AD853_RS07805;Dbxref=GenBank:WP_012104947.1;Name=WP_012104947.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016674094.1;locus_tag=AD853_RS07805;product=aldo/keto reductase;protein_id=WP_012104947.1;transl_table=11 NZ_CPUY01000006.1 RefSeq gene 152808 153362 . - . ID=gene-AD853_RS07810;Name=cas6f;gbkey=Gene;gene=cas6f;gene_biotype=protein_coding;locus_tag=AD853_RS07810;old_locus_tag=ERS008462_01581 NZ_CPUY01000006.1 Protein Homology CDS 152808 153362 . - 0 ID=cds-WP_002211866.1;Parent=gene-AD853_RS07810;Dbxref=GenBank:WP_002211866.1;Name=WP_002211866.1;Ontology_term=GO:0043571,GO:0004521;gbkey=CDS;gene=cas6f;go_function=RNA endonuclease activity|0004521||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211866.1;locus_tag=AD853_RS07810;product=type I-F CRISPR-associated endoribonuclease Cas6/Csy4;protein_id=WP_002211866.1;transl_table=11 NZ_CPUY01000006.1 RefSeq gene 153373 154377 . - . ID=gene-AD853_RS07815;Name=csy3;gbkey=Gene;gene=csy3;gene_biotype=protein_coding;locus_tag=AD853_RS07815;old_locus_tag=ERS008462_01582 NZ_CPUY01000006.1 Protein Homology CDS 153373 154377 . - 0 ID=cds-WP_011192624.1;Parent=gene-AD853_RS07815;Dbxref=GenBank:WP_011192624.1;Name=WP_011192624.1;Ontology_term=GO:0043571;gbkey=CDS;gene=csy3;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211867.1;locus_tag=AD853_RS07815;product=type I-F CRISPR-associated protein Csy3;protein_id=WP_011192624.1;transl_table=11 NZ_CPUY01000006.1 RefSeq gene 154395 155345 . - . ID=gene-AD853_RS07820;Name=csy2;gbkey=Gene;gene=csy2;gene_biotype=protein_coding;locus_tag=AD853_RS07820;old_locus_tag=ERS008462_01583 NZ_CPUY01000006.1 Protein Homology CDS 154395 155345 . - 0 ID=cds-WP_012303964.1;Parent=gene-AD853_RS07820;Dbxref=GenBank:WP_012303964.1;Name=WP_012303964.1;Ontology_term=GO:0043571;gbkey=CDS;gene=csy2;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211868.1;locus_tag=AD853_RS07820;product=type I-F CRISPR-associated protein Csy2;protein_id=WP_012303964.1;transl_table=11 NZ_CPUY01000006.1 RefSeq gene 155342 156688 . - . ID=gene-AD853_RS07825;Name=csy1;gbkey=Gene;gene=csy1;gene_biotype=protein_coding;locus_tag=AD853_RS07825;old_locus_tag=ERS008462_01584 NZ_CPUY01000006.1 Protein Homology CDS 155342 156688 . - 0 ID=cds-WP_038823635.1;Parent=gene-AD853_RS07825;Dbxref=GenBank:WP_038823635.1;Name=WP_038823635.1;Ontology_term=GO:0043571;gbkey=CDS;gene=csy1;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012104945.1;locus_tag=AD853_RS07825;product=type I-F CRISPR-associated protein Csy1;protein_id=WP_038823635.1;transl_table=11 NZ_CPUY01000006.1 RefSeq gene 157116 160406 . - . ID=gene-AD853_RS07830;Name=cas3f;gbkey=Gene;gene=cas3f;gene_biotype=protein_coding;locus_tag=AD853_RS07830;old_locus_tag=ERS008462_01585 NZ_CPUY01000006.1 Protein Homology CDS 157116 160406 . - 0 ID=cds-WP_038823634.1;Parent=gene-AD853_RS07830;Dbxref=GenBank:WP_038823634.1;Name=WP_038823634.1;Ontology_term=GO:0043571,GO:0004386;gbkey=CDS;gene=cas3f;go_function=helicase activity|0004386||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002228501.1;locus_tag=AD853_RS07830;product=type I-F CRISPR-associated helicase Cas3f;protein_id=WP_038823634.1;transl_table=11 NZ_CPUY01000006.1 RefSeq gene 160403 161383 . - . ID=gene-AD853_RS07835;Name=cas1f;gbkey=Gene;gene=cas1f;gene_biotype=protein_coding;locus_tag=AD853_RS07835;old_locus_tag=ERS008462_01586 NZ_CPUY01000006.1 Protein Homology CDS 160403 161383 . - 0 ID=cds-WP_012104943.1;Parent=gene-AD853_RS07835;Dbxref=GenBank:WP_012104943.1;Name=WP_012104943.1;Ontology_term=GO:0043571,GO:0004520,GO:0046872;gbkey=CDS;gene=cas1f;go_function=DNA endonuclease activity|0004520||IEA,metal ion binding|0046872||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210191.1;locus_tag=AD853_RS07835;product=type I-F CRISPR-associated endonuclease Cas1f;protein_id=WP_012104943.1;transl_table=11 NZ_CPUY01000006.1 RefSeq gene 162288 163532 . + . ID=gene-AD853_RS07840;Name=AD853_RS07840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS07840;old_locus_tag=ERS008462_01590 NZ_CPUY01000006.1 Protein Homology CDS 162288 163532 . + 0 ID=cds-WP_002210192.1;Parent=gene-AD853_RS07840;Dbxref=GenBank:WP_002210192.1;Name=WP_002210192.1;Ontology_term=GO:0055085,GO:0008381,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=mechanosensitive monoatomic ion channel activity|0008381||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210192.1;locus_tag=AD853_RS07840;product=mechanosensitive ion channel family protein;protein_id=WP_002210192.1;transl_table=11 NZ_CPUY01000006.1 RefSeq gene 164091 164747 . - . ID=gene-AD853_RS22615;Name=AD853_RS22615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS22615 NZ_CPUY01000006.1 Protein Homology CDS 164091 164747 . - 0 ID=cds-WP_002365200.1;Parent=gene-AD853_RS22615;Dbxref=GenBank:WP_002365200.1;Name=WP_002365200.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002365200.1;locus_tag=AD853_RS22615;product=hypothetical protein;protein_id=WP_002365200.1;transl_table=11 NZ_CPUY01000006.1 RefSeq gene 165404 166519 . - . ID=gene-AD853_RS07850;Name=AD853_RS07850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS07850;old_locus_tag=ERS008462_01592 NZ_CPUY01000006.1 Protein Homology CDS 165404 166519 . - 0 ID=cds-WP_038824568.1;Parent=gene-AD853_RS07850;Dbxref=GenBank:WP_038824568.1;Name=WP_038824568.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012104941.1;locus_tag=AD853_RS07850;product=hypothetical protein;protein_id=WP_038824568.1;transl_table=11 NZ_CPUY01000006.1 RefSeq gene 166642 167580 . - . ID=gene-AD853_RS07855;Name=AD853_RS07855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS07855;old_locus_tag=ERS008462_01593 NZ_CPUY01000006.1 Protein Homology CDS 166642 167580 . - 0 ID=cds-WP_038401387.1;Parent=gene-AD853_RS07855;Dbxref=GenBank:WP_038401387.1;Name=WP_038401387.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012303959.1;locus_tag=AD853_RS07855;product=MTP-1 family protein;protein_id=WP_038401387.1;transl_table=11 NZ_CPUY01000006.1 RefSeq gene 167606 168661 . - . ID=gene-AD853_RS07860;Name=AD853_RS07860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS07860;old_locus_tag=ERS008462_01594 NZ_CPUY01000006.1 Protein Homology CDS 167606 168661 . - 0 ID=cds-WP_011192632.1;Parent=gene-AD853_RS07860;Dbxref=GenBank:WP_011192632.1;Name=WP_011192632.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015683592.1;locus_tag=AD853_RS07860;product=glycoside hydrolase family 130 protein;protein_id=WP_011192632.1;transl_table=11 NZ_CPUY01000006.1 RefSeq gene 168808 169632 . - . ID=gene-AD853_RS07865;Name=AD853_RS07865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS07865;old_locus_tag=ERS008462_01595 NZ_CPUY01000006.1 Protein Homology CDS 168808 169632 . - 0 ID=cds-WP_002210197.1;Parent=gene-AD853_RS07865;Dbxref=GenBank:WP_002210197.1;Name=WP_002210197.1;Ontology_term=GO:0008643,GO:0055085;gbkey=CDS;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210197.1;locus_tag=AD853_RS07865;product=carbohydrate ABC transporter permease;protein_id=WP_002210197.1;transl_table=11 NZ_CPUY01000006.1 RefSeq pseudogene 169633 170508 . - . ID=gene-AD853_RS07870;Name=AD853_RS07870;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD853_RS07870;pseudo=true NZ_CPUY01000006.1 Protein Homology CDS 169633 170508 . - 0 ID=cds-AD853_RS07870;Parent=gene-AD853_RS07870;Note=internal stop;Ontology_term=GO:0008643,GO:0055085,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012104939.1;locus_tag=AD853_RS07870;product=carbohydrate ABC transporter permease;pseudo=true;transl_table=11 NZ_CPUY01000006.1 RefSeq gene 170617 171903 . - . ID=gene-AD853_RS07875;Name=AD853_RS07875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS07875;old_locus_tag=ERS008462_01597 NZ_CPUY01000006.1 Protein Homology CDS 170617 171903 . - 0 ID=cds-WP_002210199.1;Parent=gene-AD853_RS07875;Dbxref=GenBank:WP_002210199.1;Name=WP_002210199.1;Ontology_term=GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210199.1;locus_tag=AD853_RS07875;product=ABC transporter substrate-binding protein;protein_id=WP_002210199.1;transl_table=11 NZ_CPUY01000006.1 RefSeq gene 172175 173215 . + . ID=gene-AD853_RS07880;Name=AD853_RS07880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS07880;old_locus_tag=ERS008462_01598 NZ_CPUY01000006.1 Protein Homology CDS 172175 173215 . + 0 ID=cds-WP_038824570.1;Parent=gene-AD853_RS07880;Dbxref=GenBank:WP_038824570.1;Name=WP_038824570.1;Ontology_term=GO:0006351,GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=DNA-templated transcription|0006351||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210200.1;locus_tag=AD853_RS07880;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_038824570.1;transl_table=11 NZ_CPUY01000006.1 RefSeq gene 173232 174620 . + . ID=gene-AD853_RS07885;Name=AD853_RS07885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS07885;old_locus_tag=ERS008462_01599 NZ_CPUY01000006.1 Protein Homology CDS 173232 174620 . + 0 ID=cds-WP_002210201.1;Parent=gene-AD853_RS07885;Dbxref=GenBank:WP_002210201.1;Name=WP_002210201.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210201.1;locus_tag=AD853_RS07885;product=phosphohexomutase domain-containing protein;protein_id=WP_002210201.1;transl_table=11 NZ_CPUY01000006.1 RefSeq gene 174720 175799 . + . ID=gene-AD853_RS07890;Name=AD853_RS07890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS07890;old_locus_tag=ERS008462_01600 NZ_CPUY01000006.1 Protein Homology CDS 174720 175799 . + 0 ID=cds-WP_038824571.1;Parent=gene-AD853_RS07890;Dbxref=GenBank:WP_038824571.1;Name=WP_038824571.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192635.1;locus_tag=AD853_RS07890;product=ABC transporter ATP-binding protein;protein_id=WP_038824571.1;transl_table=11 NZ_CPUY01000006.1 RefSeq gene 176082 176516 . - . ID=gene-AD853_RS07895;Name=AD853_RS07895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS07895;old_locus_tag=ERS008462_01601 NZ_CPUY01000006.1 Protein Homology CDS 176082 176516 . - 0 ID=cds-WP_162769782.1;Parent=gene-AD853_RS07895;Dbxref=GenBank:WP_162769782.1;Name=WP_162769782.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002224304.1;locus_tag=AD853_RS07895;product=hypothetical protein;protein_id=WP_162769782.1;transl_table=11 NZ_CPUY01000006.1 RefSeq pseudogene 177029 183208 . - . ID=gene-AD853_RS21520;Name=cdiA;gbkey=Gene;gene=cdiA;gene_biotype=pseudogene;locus_tag=AD853_RS21520;old_locus_tag=ERS008462_01602;partial=true;pseudo=true;start_range=.,177029 NZ_CPUY01000006.1 Protein Homology CDS 177029 183208 . - 0 ID=cds-AD853_RS21520;Parent=gene-AD853_RS21520;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;gene=cdiA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_050090717.1;locus_tag=AD853_RS21520;partial=true;product=contact-dependent inhibition toxin CdiA;pseudo=true;start_range=.,177029;transl_table=11 NZ_CPUY01000006.1 RefSeq gene 183363 185051 . - . ID=gene-AD853_RS07910;Name=AD853_RS07910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS07910;old_locus_tag=ERS008462_01604 NZ_CPUY01000006.1 Protein Homology CDS 183363 185051 . - 0 ID=cds-WP_002210212.1;Parent=gene-AD853_RS07910;Dbxref=GenBank:WP_002210212.1;Name=WP_002210212.1;Ontology_term=GO:0006811,GO:0015031,GO:0015288,GO:0046930;gbkey=CDS;go_component=pore complex|0046930||IEA;go_function=porin activity|0015288||IEA;go_process=monoatomic ion transport|0006811||IEA,protein transport|0015031||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210212.1;locus_tag=AD853_RS07910;product=ShlB/FhaC/HecB family hemolysin secretion/activation protein;protein_id=WP_002210212.1;transl_table=11 NZ_CPUY01000006.1 RefSeq gene 185703 186668 . - . ID=gene-AD853_RS07915;Name=AD853_RS07915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS07915;old_locus_tag=ERS008462_01605 NZ_CPUY01000006.1 Protein Homology CDS 185703 186668 . - 0 ID=cds-WP_038824620.1;Parent=gene-AD853_RS07915;Dbxref=GenBank:WP_038824620.1;Name=WP_038824620.1;Ontology_term=GO:0010181,GO:0016491,GO:0046872,GO:0051537;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA,metal ion binding|0046872||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002213817.1;locus_tag=AD853_RS07915;product=PDR/VanB family oxidoreductase;protein_id=WP_038824620.1;transl_table=11 NZ_CPUY01000006.1 RefSeq gene 186761 187885 . - . ID=gene-AD853_RS07920;Name=AD853_RS07920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS07920;old_locus_tag=ERS008462_01606 NZ_CPUY01000006.1 Protein Homology CDS 186761 187885 . - 0 ID=cds-WP_002213815.1;Parent=gene-AD853_RS07920;Dbxref=GenBank:WP_002213815.1;Name=WP_002213815.1;Ontology_term=GO:0005506,GO:0016705,GO:0051537;gbkey=CDS;go_function=iron ion binding|0005506||IEA,oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen|0016705||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310538.1;locus_tag=AD853_RS07920;product=aromatic ring-hydroxylating oxygenase subunit alpha;protein_id=WP_002213815.1;transl_table=11 NZ_CPUY01000006.1 RefSeq gene 187992 189635 . - . ID=gene-AD853_RS07925;Name=AD853_RS07925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS07925;old_locus_tag=ERS008462_01607 NZ_CPUY01000006.1 Protein Homology CDS 187992 189635 . - 0 ID=cds-WP_038824621.1;Parent=gene-AD853_RS07925;Dbxref=GenBank:WP_038824621.1;Name=WP_038824621.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015683589.1;locus_tag=AD853_RS07925;product=BCCT family transporter;protein_id=WP_038824621.1;transl_table=11 NZ_CPUY01000006.1 RefSeq pseudogene 190050 190118 . - . ID=gene-AD853_RS21770;Name=AD853_RS21770;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD853_RS21770;partial=true;pseudo=true;start_range=.,190050 NZ_CPUY01000006.1 Protein Homology CDS 190050 190118 . - 0 ID=cds-AD853_RS21770;Parent=gene-AD853_RS21770;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002224869.1;locus_tag=AD853_RS21770;partial=true;product=gluconate 5-dehydrogenase;pseudo=true;start_range=.,190050;transl_table=11 NZ_CPUY01000006.1 RefSeq gene 190252 191337 . - . ID=gene-AD853_RS07930;Name=AD853_RS07930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS07930;old_locus_tag=ERS008462_01608 NZ_CPUY01000006.1 Protein Homology CDS 190252 191337 . - 0 ID=cds-WP_002210218.1;Parent=gene-AD853_RS07930;Dbxref=GenBank:WP_002210218.1;Name=WP_002210218.1;Ontology_term=GO:0046395,GO:0009027,GO:0051287;gbkey=CDS;go_function=tartrate dehydrogenase activity|0009027||IEA,NAD binding|0051287||IEA;go_process=carboxylic acid catabolic process|0046395||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210218.1;locus_tag=AD853_RS07930;product=tartrate dehydrogenase;protein_id=WP_002210218.1;transl_table=11 NZ_CPUY01000006.1 RefSeq gene 191440 192381 . + . ID=gene-AD853_RS07935;Name=AD853_RS07935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS07935;old_locus_tag=ERS008462_01609 NZ_CPUY01000006.1 Protein Homology CDS 191440 192381 . + 0 ID=cds-WP_002210219.1;Parent=gene-AD853_RS07935;Dbxref=GenBank:WP_002210219.1;Name=WP_002210219.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210219.1;locus_tag=AD853_RS07935;product=LysR substrate-binding domain-containing protein;protein_id=WP_002210219.1;transl_table=11 NZ_CPUY01000006.1 RefSeq gene 192751 193755 . + . ID=gene-AD853_RS07940;Name=AD853_RS07940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS07940;old_locus_tag=ERS008462_01610 NZ_CPUY01000006.1 Protein Homology CDS 192751 193755 . + 0 ID=cds-WP_011192641.1;Parent=gene-AD853_RS07940;Dbxref=GenBank:WP_011192641.1;Name=WP_011192641.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210220.1;locus_tag=AD853_RS07940;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_011192641.1;transl_table=11 NZ_CPUY01000006.1 RefSeq gene 193871 194863 . - . ID=gene-AD853_RS07945;Name=AD853_RS07945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS07945;old_locus_tag=ERS008462_01611 NZ_CPUY01000006.1 Protein Homology CDS 193871 194863 . - 0 ID=cds-WP_002210221.1;Parent=gene-AD853_RS07945;Dbxref=GenBank:WP_002210221.1;Name=WP_002210221.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016583098.1;locus_tag=AD853_RS07945;product=ABC transporter permease;protein_id=WP_002210221.1;transl_table=11 NZ_CPUY01000006.1 RefSeq pseudogene 194860 196349 . - . ID=gene-AD853_RS07950;Name=AD853_RS07950;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD853_RS07950;old_locus_tag=ERS008462_01612;pseudo=true NZ_CPUY01000006.1 Protein Homology CDS 194860 196349 . - 0 ID=cds-AD853_RS07950;Parent=gene-AD853_RS07950;Note=frameshifted;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192642.1;locus_tag=AD853_RS07950;product=sugar ABC transporter ATP-binding protein;pseudo=true;transl_table=11 NZ_CPUY01000006.1 RefSeq gene 196406 197323 . - . ID=gene-AD853_RS07955;Name=AD853_RS07955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS07955;old_locus_tag=ERS008462_01613 NZ_CPUY01000006.1 Protein Homology CDS 196406 197323 . - 0 ID=cds-WP_002210223.1;Parent=gene-AD853_RS07955;Dbxref=GenBank:WP_002210223.1;Name=WP_002210223.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192643.1;locus_tag=AD853_RS07955;product=substrate-binding domain-containing protein;protein_id=WP_002210223.1;transl_table=11 NZ_CPUY01000006.1 RefSeq gene 197498 198364 . - . ID=gene-AD853_RS07960;Name=AD853_RS07960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS07960;old_locus_tag=ERS008462_01614 NZ_CPUY01000006.1 Protein Homology CDS 197498 198364 . - 0 ID=cds-WP_223847719.1;Parent=gene-AD853_RS07960;Dbxref=GenBank:WP_223847719.1;Name=WP_223847719.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007679765.1;locus_tag=AD853_RS07960;product=zinc-binding dehydrogenase;protein_id=WP_223847719.1;transl_table=11 NZ_CPUY01000006.1 RefSeq gene 198377 198565 . - . ID=gene-AD853_RS22125;Name=AD853_RS22125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS22125 NZ_CPUY01000006.1 GeneMarkS-2+ CDS 198377 198565 . - 0 ID=cds-WP_223847721.1;Parent=gene-AD853_RS22125;Dbxref=GenBank:WP_223847721.1;Name=WP_223847721.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AD853_RS22125;product=hypothetical protein;protein_id=WP_223847721.1;transl_table=11 NZ_CPUY01000006.1 RefSeq gene 199075 199533 . - . ID=gene-AD853_RS07965;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=AD853_RS07965;old_locus_tag=ERS008462_01616 NZ_CPUY01000006.1 Protein Homology CDS 199075 199533 . - 0 ID=cds-WP_002213775.1;Parent=gene-AD853_RS07965;Dbxref=GenBank:WP_002213775.1;Name=WP_002213775.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001550737.1;locus_tag=AD853_RS07965;product=IS200/IS605-like element IS1541B family transposase;protein_id=WP_002213775.1;transl_table=11 ##sequence-region NZ_CPUY01000007.1 1 197389 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=633 NZ_CPUY01000007.1 RefSeq region 1 197389 . + . ID=NZ_CPUY01000007.1:1..197389;Dbxref=taxon:633;collection-date=1900/2008;country=South Africa;gbkey=Src;genome=genomic;isolation-source=not known;mol_type=genomic DNA;nat-host=pig;serovar=O:3;strain=IP32544 NZ_CPUY01000007.1 RefSeq gene 161 481 . + . ID=gene-AD853_RS07980;Name=AD853_RS07980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS07980;old_locus_tag=ERS008462_01618 NZ_CPUY01000007.1 Protein Homology CDS 161 481 . + 0 ID=cds-WP_038834514.1;Parent=gene-AD853_RS07980;Dbxref=GenBank:WP_038834514.1;Name=WP_038834514.1;Ontology_term=GO:0009056,GO:0046872,GO:0051537;gbkey=CDS;go_function=metal ion binding|0046872||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;go_process=catabolic process|0009056||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209968.1;locus_tag=AD853_RS07980;product=non-heme iron oxygenase ferredoxin subunit;protein_id=WP_038834514.1;transl_table=11 NZ_CPUY01000007.1 RefSeq gene 529 639 . - . ID=gene-AD853_RS22620;Name=AD853_RS22620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS22620 NZ_CPUY01000007.1 Protein Homology CDS 529 639 . - 0 ID=cds-WP_155406230.1;Parent=gene-AD853_RS22620;Dbxref=GenBank:WP_155406230.1;Name=WP_155406230.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002224869.1;locus_tag=AD853_RS22620;product=gluconate 5-dehydrogenase;protein_id=WP_155406230.1;transl_table=11 NZ_CPUY01000007.1 RefSeq gene 785 1537 . - . ID=gene-AD853_RS07985;Name=loiP;gbkey=Gene;gene=loiP;gene_biotype=protein_coding;locus_tag=AD853_RS07985;old_locus_tag=ERS008462_01619 NZ_CPUY01000007.1 Protein Homology CDS 785 1537 . - 0 ID=cds-WP_011192969.1;Parent=gene-AD853_RS07985;Dbxref=GenBank:WP_011192969.1;Name=WP_011192969.1;Ontology_term=GO:0004222;gbkey=CDS;gene=loiP;go_function=metalloendopeptidase activity|0004222||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005192806.1;locus_tag=AD853_RS07985;product=metalloprotease LoiP;protein_id=WP_011192969.1;transl_table=11 NZ_CPUY01000007.1 RefSeq gene 2011 4005 . + . ID=gene-AD853_RS07990;Name=tkt;gbkey=Gene;gene=tkt;gene_biotype=protein_coding;locus_tag=AD853_RS07990;old_locus_tag=ERS008462_01620 NZ_CPUY01000007.1 Protein Homology CDS 2011 4005 . + 0 ID=cds-WP_038824023.1;Parent=gene-AD853_RS07990;Dbxref=GenBank:WP_038824023.1;Name=WP_038824023.1;Ontology_term=GO:0004802;gbkey=CDS;gene=tkt;go_function=transketolase activity|0004802||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015379005.1;locus_tag=AD853_RS07990;product=transketolase;protein_id=WP_038824023.1;transl_table=11 NZ_CPUY01000007.1 RefSeq gene 4384 5400 . + . ID=gene-AD853_RS07995;Name=epd;gbkey=Gene;gene=epd;gene_biotype=protein_coding;locus_tag=AD853_RS07995;old_locus_tag=ERS008462_01621 NZ_CPUY01000007.1 Protein Homology CDS 4384 5400 . + 0 ID=cds-WP_002209964.1;Parent=gene-AD853_RS07995;Dbxref=GenBank:WP_002209964.1;Name=WP_002209964.1;Ontology_term=GO:0042823,GO:0048001,GO:0051287;gbkey=CDS;gene=epd;go_function=erythrose-4-phosphate dehydrogenase activity|0048001||IEA,NAD binding|0051287||IEA;go_process=pyridoxal phosphate biosynthetic process|0042823||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209964.1;locus_tag=AD853_RS07995;product=erythrose-4-phosphate dehydrogenase;protein_id=WP_002209964.1;transl_table=11 NZ_CPUY01000007.1 RefSeq gene 5503 6666 . + . ID=gene-AD853_RS08000;Name=pgk;gbkey=Gene;gene=pgk;gene_biotype=protein_coding;locus_tag=AD853_RS08000;old_locus_tag=ERS008462_01622 NZ_CPUY01000007.1 Protein Homology CDS 5503 6666 . + 0 ID=cds-WP_002209963.1;Parent=gene-AD853_RS08000;Dbxref=GenBank:WP_002209963.1;Name=WP_002209963.1;gbkey=CDS;gene=pgk;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228721.1;locus_tag=AD853_RS08000;product=phosphoglycerate kinase;protein_id=WP_002209963.1;transl_table=11 NZ_CPUY01000007.1 RefSeq gene 6786 7865 . + . ID=gene-AD853_RS08005;Name=fbaA;gbkey=Gene;gene=fbaA;gene_biotype=protein_coding;locus_tag=AD853_RS08005;old_locus_tag=ERS008462_01623 NZ_CPUY01000007.1 Protein Homology CDS 6786 7865 . + 0 ID=cds-WP_002209962.1;Parent=gene-AD853_RS08005;Dbxref=GenBank:WP_002209962.1;Name=WP_002209962.1;Ontology_term=GO:0005975,GO:0006096,GO:0004332,GO:0008270;gbkey=CDS;gene=fbaA;go_function=fructose-bisphosphate aldolase activity|0004332||IEA,zinc ion binding|0008270||IEA;go_process=carbohydrate metabolic process|0005975||IEA,glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461984.1;locus_tag=AD853_RS08005;product=class II fructose-bisphosphate aldolase;protein_id=WP_002209962.1;transl_table=11 NZ_CPUY01000007.1 RefSeq gene 8305 9174 . + . ID=gene-AD853_RS08010;Name=mscS;gbkey=Gene;gene=mscS;gene_biotype=protein_coding;locus_tag=AD853_RS08010;old_locus_tag=ERS008462_01624 NZ_CPUY01000007.1 Protein Homology CDS 8305 9174 . + 0 ID=cds-WP_002209961.1;Parent=gene-AD853_RS08010;Dbxref=GenBank:WP_002209961.1;Name=WP_002209961.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=mscS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209961.1;locus_tag=AD853_RS08010;product=small-conductance mechanosensitive channel MscS;protein_id=WP_002209961.1;transl_table=11 NZ_CPUY01000007.1 RefSeq gene 9436 10053 . + . ID=gene-AD853_RS08015;Name=argO;gbkey=Gene;gene=argO;gene_biotype=protein_coding;locus_tag=AD853_RS08015;old_locus_tag=ERS008462_01625 NZ_CPUY01000007.1 Protein Homology CDS 9436 10053 . + 0 ID=cds-WP_038824737.1;Parent=gene-AD853_RS08015;Dbxref=GenBank:WP_038824737.1;Name=WP_038824737.1;Ontology_term=GO:1903826,GO:0061459,GO:0016020;gbkey=CDS;gene=argO;go_component=membrane|0016020||IEA;go_function=L-arginine transmembrane transporter activity|0061459||IEA;go_process=L-arginine transmembrane transport|1903826||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012303656.1;locus_tag=AD853_RS08015;product=arginine exporter ArgO;protein_id=WP_038824737.1;transl_table=11 NZ_CPUY01000007.1 RefSeq gene 10243 11022 . + . ID=gene-AD853_RS08020;Name=AD853_RS08020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS08020;old_locus_tag=ERS008462_01626 NZ_CPUY01000007.1 Protein Homology CDS 10243 11022 . + 0 ID=cds-WP_011192966.1;Parent=gene-AD853_RS08020;Dbxref=GenBank:WP_011192966.1;Name=WP_011192966.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192966.1;locus_tag=AD853_RS08020;product=oxidative stress defense protein;protein_id=WP_011192966.1;transl_table=11 NZ_CPUY01000007.1 RefSeq gene 11033 11941 . - . ID=gene-AD853_RS08025;Name=AD853_RS08025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS08025;old_locus_tag=ERS008462_01627 NZ_CPUY01000007.1 Protein Homology CDS 11033 11941 . - 0 ID=cds-WP_002209958.1;Parent=gene-AD853_RS08025;Dbxref=GenBank:WP_002209958.1;Name=WP_002209958.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700,GO:0005829;gbkey=CDS;go_component=cytosol|0005829||IEA;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209958.1;locus_tag=AD853_RS08025;product=LysR family transcriptional regulator ArgP;protein_id=WP_002209958.1;transl_table=11 NZ_CPUY01000007.1 RefSeq gene 12283 12939 . + . ID=gene-AD853_RS08030;Name=rpiA;gbkey=Gene;gene=rpiA;gene_biotype=protein_coding;locus_tag=AD853_RS08030;old_locus_tag=ERS008462_01628 NZ_CPUY01000007.1 Protein Homology CDS 12283 12939 . + 0 ID=cds-WP_002209957.1;Parent=gene-AD853_RS08030;Dbxref=GenBank:WP_002209957.1;Name=WP_002209957.1;Ontology_term=GO:0009052,GO:0004751;gbkey=CDS;gene=rpiA;go_function=ribose-5-phosphate isomerase activity|0004751||IEA;go_process=pentose-phosphate shunt%2C non-oxidative branch|0009052||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209957.1;locus_tag=AD853_RS08030;product=ribose-5-phosphate isomerase RpiA;protein_id=WP_002209957.1;transl_table=11 NZ_CPUY01000007.1 RefSeq gene 13246 14487 . + . ID=gene-AD853_RS08035;Name=serA;gbkey=Gene;gene=serA;gene_biotype=protein_coding;locus_tag=AD853_RS08035;old_locus_tag=ERS008462_01629 NZ_CPUY01000007.1 Protein Homology CDS 13246 14487 . + 0 ID=cds-WP_002209956.1;Parent=gene-AD853_RS08035;Dbxref=GenBank:WP_002209956.1;Name=WP_002209956.1;Ontology_term=GO:0016616,GO:0051287;gbkey=CDS;gene=serA;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228712.1;locus_tag=AD853_RS08035;product=phosphoglycerate dehydrogenase;protein_id=WP_002209956.1;transl_table=11 NZ_CPUY01000007.1 RefSeq gene 14751 15347 . - . ID=gene-AD853_RS08040;Name=AD853_RS08040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS08040;old_locus_tag=ERS008462_01630 NZ_CPUY01000007.1 Protein Homology CDS 14751 15347 . - 0 ID=cds-WP_011192965.1;Parent=gene-AD853_RS08040;Dbxref=GenBank:WP_011192965.1;Name=WP_011192965.1;Ontology_term=GO:0006730,GO:0030272;gbkey=CDS;go_function=5-formyltetrahydrofolate cyclo-ligase activity|0030272||IEA;go_process=one-carbon metabolic process|0006730||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012413931.1;locus_tag=AD853_RS08040;product=5-formyltetrahydrofolate cyclo-ligase;protein_id=WP_011192965.1;transl_table=11 NZ_CPUY01000007.1 RefSeq gene 15473 15655 . - . ID=gene-AD853_RS20460;Name=ssrS;gbkey=Gene;gene=ssrS;gene_biotype=ncRNA;locus_tag=AD853_RS20460 NZ_CPUY01000007.1 cmsearch ncRNA 15473 15655 . - . ID=rna-AD853_RS20460;Parent=gene-AD853_RS20460;Dbxref=RFAM:RF00013;gbkey=ncRNA;gene=ssrS;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD853_RS20460;product=6S RNA NZ_CPUY01000007.1 cmsearch exon 15473 15655 . - . ID=exon-AD853_RS20460-1;Parent=rna-AD853_RS20460;Dbxref=RFAM:RF00013;gbkey=ncRNA;gene=ssrS;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD853_RS20460;product=6S RNA NZ_CPUY01000007.1 RefSeq gene 15711 16040 . - . ID=gene-AD853_RS08045;Name=zapA;gbkey=Gene;gene=zapA;gene_biotype=protein_coding;locus_tag=AD853_RS08045;old_locus_tag=ERS008462_01632 NZ_CPUY01000007.1 Protein Homology CDS 15711 16040 . - 0 ID=cds-WP_002209954.1;Parent=gene-AD853_RS08045;Dbxref=GenBank:WP_002209954.1;Name=WP_002209954.1;gbkey=CDS;gene=zapA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005971092.1;locus_tag=AD853_RS08045;product=cell division protein ZapA;protein_id=WP_002209954.1;transl_table=11 NZ_CPUY01000007.1 RefSeq gene 16377 16955 . + . ID=gene-AD853_RS08050;Name=AD853_RS08050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS08050;old_locus_tag=ERS008462_01633 NZ_CPUY01000007.1 Protein Homology CDS 16377 16955 . + 0 ID=cds-WP_050124588.1;Parent=gene-AD853_RS08050;Dbxref=GenBank:WP_050124588.1;Name=WP_050124588.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209953.1;locus_tag=AD853_RS08050;product=YecA/YgfB family protein;protein_id=WP_050124588.1;transl_table=11 NZ_CPUY01000007.1 RefSeq gene 17043 18356 . + . ID=gene-AD853_RS08055;Name=pepP;gbkey=Gene;gene=pepP;gene_biotype=protein_coding;locus_tag=AD853_RS08055;old_locus_tag=ERS008462_01634 NZ_CPUY01000007.1 Protein Homology CDS 17043 18356 . + 0 ID=cds-WP_038824664.1;Parent=gene-AD853_RS08055;Dbxref=GenBank:WP_038824664.1;Name=WP_038824664.1;Ontology_term=GO:0070006;gbkey=CDS;gene=pepP;go_function=metalloaminopeptidase activity|0070006||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192964.1;locus_tag=AD853_RS08055;product=Xaa-Pro aminopeptidase;protein_id=WP_038824664.1;transl_table=11 NZ_CPUY01000007.1 RefSeq gene 18408 19586 . + . ID=gene-AD853_RS08060;Name=ubiH;gbkey=Gene;gene=ubiH;gene_biotype=protein_coding;gene_synonym=visB;locus_tag=AD853_RS08060;old_locus_tag=ERS008462_01635 NZ_CPUY01000007.1 Protein Homology CDS 18408 19586 . + 0 ID=cds-WP_038824663.1;Parent=gene-AD853_RS08060;Dbxref=GenBank:WP_038824663.1;Name=WP_038824663.1;Ontology_term=GO:0006744,GO:0008681,GO:0016709,GO:0071949;gbkey=CDS;gene=ubiH;go_function=2-octaprenyl-6-methoxyphenol hydroxylase activity|0008681||IEA,oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C NAD(P)H as one donor%2C and incorporation of one atom of oxygen|0016709||IEA,FAD binding|0071949||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209951.1;locus_tag=AD853_RS08060;product=2-octaprenyl-6-methoxyphenyl hydroxylase;protein_id=WP_038824663.1;transl_table=11 NZ_CPUY01000007.1 RefSeq gene 19759 20979 . + . ID=gene-AD853_RS08065;Name=ubiI;gbkey=Gene;gene=ubiI;gene_biotype=protein_coding;gene_synonym=visC;locus_tag=AD853_RS08065;old_locus_tag=ERS008462_01636 NZ_CPUY01000007.1 Protein Homology CDS 19759 20979 . + 0 ID=cds-WP_038824662.1;Parent=gene-AD853_RS08065;Dbxref=GenBank:WP_038824662.1;Name=WP_038824662.1;Ontology_term=GO:0006744,GO:0016709,GO:0071949;gbkey=CDS;gene=ubiI;go_function=oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C NAD(P)H as one donor%2C and incorporation of one atom of oxygen|0016709||IEA,FAD binding|0071949||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012104673.1;locus_tag=AD853_RS08065;product=FAD-dependent 2-octaprenylphenol hydroxylase;protein_id=WP_038824662.1;transl_table=11 NZ_CPUY01000007.1 RefSeq gene 21676 22773 . + . ID=gene-AD853_RS08070;Name=gcvT;gbkey=Gene;gene=gcvT;gene_biotype=protein_coding;locus_tag=AD853_RS08070;old_locus_tag=ERS008462_01637 NZ_CPUY01000007.1 Protein Homology CDS 21676 22773 . + 0 ID=cds-WP_011192962.1;Parent=gene-AD853_RS08070;Dbxref=GenBank:WP_011192962.1;Name=WP_011192962.1;Ontology_term=GO:0019464,GO:0004047,GO:0005737;gbkey=CDS;gene=gcvT;go_component=cytoplasm|0005737||IEA;go_function=aminomethyltransferase activity|0004047||IEA;go_process=glycine decarboxylation via glycine cleavage system|0019464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209949.1;locus_tag=AD853_RS08070;product=glycine cleavage system aminomethyltransferase GcvT;protein_id=WP_011192962.1;transl_table=11 NZ_CPUY01000007.1 RefSeq gene 22842 23228 . + . ID=gene-AD853_RS08075;Name=gcvH;gbkey=Gene;gene=gcvH;gene_biotype=protein_coding;locus_tag=AD853_RS08075;old_locus_tag=ERS008462_01638 NZ_CPUY01000007.1 Protein Homology CDS 22842 23228 . + 0 ID=cds-WP_002209948.1;Parent=gene-AD853_RS08075;Dbxref=GenBank:WP_002209948.1;Name=WP_002209948.1;Ontology_term=GO:0019464,GO:0005960;gbkey=CDS;gene=gcvH;go_component=glycine cleavage complex|0005960||IEA;go_process=glycine decarboxylation via glycine cleavage system|0019464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209948.1;locus_tag=AD853_RS08075;product=glycine cleavage system protein GcvH;protein_id=WP_002209948.1;transl_table=11 NZ_CPUY01000007.1 RefSeq gene 23440 26319 . + . ID=gene-AD853_RS08080;Name=gcvP;gbkey=Gene;gene=gcvP;gene_biotype=protein_coding;locus_tag=AD853_RS08080;old_locus_tag=ERS008462_01639 NZ_CPUY01000007.1 Protein Homology CDS 23440 26319 . + 0 ID=cds-WP_002209947.1;Parent=gene-AD853_RS08080;Dbxref=GenBank:WP_002209947.1;Name=WP_002209947.1;Ontology_term=GO:0019464,GO:0004375;gbkey=CDS;gene=gcvP;go_function=glycine dehydrogenase (decarboxylating) activity|0004375||IEA;go_process=glycine decarboxylation via glycine cleavage system|0019464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019455636.1;locus_tag=AD853_RS08080;product=aminomethyl-transferring glycine dehydrogenase;protein_id=WP_002209947.1;transl_table=11 NZ_CPUY01000007.1 RefSeq gene 26290 26427 . - . ID=gene-AD853_RS22625;Name=AD853_RS22625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS22625 NZ_CPUY01000007.1 Protein Homology CDS 26290 26427 . - 0 ID=cds-WP_196299227.1;Parent=gene-AD853_RS22625;Dbxref=GenBank:WP_196299227.1;Name=WP_196299227.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002430096.1;locus_tag=AD853_RS22625;product=gluconate 5-dehydrogenase;protein_id=WP_196299227.1;transl_table=11 NZ_CPUY01000007.1 RefSeq gene 26697 27134 . + . ID=gene-AD853_RS08085;Name=AD853_RS08085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS08085;old_locus_tag=ERS008462_01640 NZ_CPUY01000007.1 Protein Homology CDS 26697 27134 . + 0 ID=cds-WP_038824996.1;Parent=gene-AD853_RS08085;Dbxref=GenBank:WP_038824996.1;Name=WP_038824996.1;Ontology_term=GO:0008289;gbkey=CDS;go_function=lipid binding|0008289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209946.1;locus_tag=AD853_RS08085;product=lipocalin-like domain-containing protein;protein_id=WP_038824996.1;transl_table=11 NZ_CPUY01000007.1 RefSeq pseudogene 27150 27230 . + . ID=gene-AD853_RS22145;Name=AD853_RS22145;end_range=27230,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD853_RS22145;partial=true;pseudo=true NZ_CPUY01000007.1 Protein Homology CDS 27150 27230 . + 0 ID=cds-AD853_RS22145;Parent=gene-AD853_RS22145;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=27230,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017491332.1;locus_tag=AD853_RS22145;partial=true;product=SDR family oxidoreductase;pseudo=true;transl_table=11 NZ_CPUY01000007.1 RefSeq gene 28194 28346 . + . ID=gene-AD853_RS22480;Name=AD853_RS22480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS22480;old_locus_tag=ERS008462_01641 NZ_CPUY01000007.1 Protein Homology CDS 28194 28346 . + 0 ID=cds-WP_002209944.1;Parent=gene-AD853_RS22480;Dbxref=GenBank:WP_002209944.1;Name=WP_002209944.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209944.1;locus_tag=AD853_RS22480;product=hypothetical protein;protein_id=WP_002209944.1;transl_table=11 NZ_CPUY01000007.1 RefSeq gene 28394 30340 . + . ID=gene-AD853_RS08095;Name=yapN;gbkey=Gene;gene=yapN;gene_biotype=protein_coding;locus_tag=AD853_RS08095;old_locus_tag=ERS008462_01642 NZ_CPUY01000007.1 Protein Homology CDS 28394 30340 . + 0 ID=cds-WP_269745304.1;Parent=gene-AD853_RS08095;Dbxref=GenBank:WP_269745304.1;Name=WP_269745304.1;gbkey=CDS;gene=yapN;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304000.1;locus_tag=AD853_RS08095;product=autotransporter adhesin YapN;protein_id=WP_269745304.1;transl_table=11 NZ_CPUY01000007.1 RefSeq gene 30444 31547 . + . ID=gene-AD853_RS08100;Name=AD853_RS08100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS08100;old_locus_tag=ERS008462_01643 NZ_CPUY01000007.1 Protein Homology CDS 30444 31547 . + 0 ID=cds-WP_038824998.1;Parent=gene-AD853_RS08100;Dbxref=GenBank:WP_038824998.1;Name=WP_038824998.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012104675.1;locus_tag=AD853_RS08100;product=hypothetical protein;protein_id=WP_038824998.1;transl_table=11 NZ_CPUY01000007.1 RefSeq gene 31749 32450 . + . ID=gene-AD853_RS08105;Name=trhA;gbkey=Gene;gene=trhA;gene_biotype=protein_coding;locus_tag=AD853_RS08105;old_locus_tag=ERS008462_01644 NZ_CPUY01000007.1 Protein Homology CDS 31749 32450 . + 0 ID=cds-WP_011192959.1;Parent=gene-AD853_RS08105;Dbxref=GenBank:WP_011192959.1;Name=WP_011192959.1;Ontology_term=GO:0019835;gbkey=CDS;gene=trhA;go_process=cytolysis|0019835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012303662.1;locus_tag=AD853_RS08105;product=PAQR family membrane homeostasis protein TrhA;protein_id=WP_011192959.1;transl_table=11 NZ_CPUY01000007.1 RefSeq gene 32708 33205 . + . ID=gene-AD853_RS08110;Name=AD853_RS08110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS08110;old_locus_tag=ERS008462_01645 NZ_CPUY01000007.1 Protein Homology CDS 32708 33205 . + 0 ID=cds-WP_002209941.1;Parent=gene-AD853_RS08110;Dbxref=GenBank:WP_002209941.1;Name=WP_002209941.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209941.1;locus_tag=AD853_RS08110;product=DUF2165 family protein;protein_id=WP_002209941.1;transl_table=11 NZ_CPUY01000007.1 RefSeq gene 33278 34270 . - . ID=gene-AD853_RS08115;Name=ygfZ;gbkey=Gene;gene=ygfZ;gene_biotype=protein_coding;locus_tag=AD853_RS08115;old_locus_tag=ERS008462_01646 NZ_CPUY01000007.1 Protein Homology CDS 33278 34270 . - 0 ID=cds-WP_011192958.1;Parent=gene-AD853_RS08115;Dbxref=GenBank:WP_011192958.1;Name=WP_011192958.1;Ontology_term=GO:0009451,GO:0005542;gbkey=CDS;gene=ygfZ;go_function=folic acid binding|0005542||IEA;go_process=RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012413924.1;locus_tag=AD853_RS08115;product=tRNA-modifying protein YgfZ;protein_id=WP_011192958.1;transl_table=11 NZ_CPUY01000007.1 RefSeq gene 34587 34853 . + . ID=gene-AD853_RS08120;Name=sdhE;gbkey=Gene;gene=sdhE;gene_biotype=protein_coding;locus_tag=AD853_RS08120;old_locus_tag=ERS008462_01647 NZ_CPUY01000007.1 Protein Homology CDS 34587 34853 . + 0 ID=cds-WP_002209939.1;Parent=gene-AD853_RS08120;Dbxref=GenBank:WP_002209939.1;Name=WP_002209939.1;gbkey=CDS;gene=sdhE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311796.1;locus_tag=AD853_RS08120;product=FAD assembly factor SdhE;protein_id=WP_002209939.1;transl_table=11 NZ_CPUY01000007.1 RefSeq gene 34834 35259 . + . ID=gene-AD853_RS08125;Name=AD853_RS08125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS08125 NZ_CPUY01000007.1 Protein Homology CDS 34834 35259 . + 0 ID=cds-WP_012104676.1;Parent=gene-AD853_RS08125;Dbxref=GenBank:WP_012104676.1;Name=WP_012104676.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012104676.1;locus_tag=AD853_RS08125;product=protein YgfX;protein_id=WP_012104676.1;transl_table=11 NZ_CPUY01000007.1 RefSeq gene 35259 35957 . + . ID=gene-AD853_RS08130;Name=creB;gbkey=Gene;gene=creB;gene_biotype=protein_coding;locus_tag=AD853_RS08130;old_locus_tag=ERS008462_01648 NZ_CPUY01000007.1 Protein Homology CDS 35259 35957 . + 0 ID=cds-WP_002209937.1;Parent=gene-AD853_RS08130;Dbxref=GenBank:WP_002209937.1;Name=WP_002209937.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=creB;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209937.1;locus_tag=AD853_RS08130;product=two-component system response regulator CreB;protein_id=WP_002209937.1;transl_table=11 NZ_CPUY01000007.1 RefSeq gene 35968 37386 . + . ID=gene-AD853_RS08135;Name=creC;gbkey=Gene;gene=creC;gene_biotype=protein_coding;locus_tag=AD853_RS08135;old_locus_tag=ERS008462_01649 NZ_CPUY01000007.1 Protein Homology CDS 35968 37386 . + 0 ID=cds-WP_002209936.1;Parent=gene-AD853_RS08135;Dbxref=GenBank:WP_002209936.1;Name=WP_002209936.1;Ontology_term=GO:0007165,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=creC;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209936.1;locus_tag=AD853_RS08135;product=two-component system sensor histidine kinase CreC;protein_id=WP_002209936.1;transl_table=11 NZ_CPUY01000007.1 RefSeq gene 37507 38964 . + . ID=gene-AD853_RS08140;Name=creD;gbkey=Gene;gene=creD;gene_biotype=protein_coding;locus_tag=AD853_RS08140;old_locus_tag=ERS008462_01650 NZ_CPUY01000007.1 Protein Homology CDS 37507 38964 . + 0 ID=cds-WP_038825001.1;Parent=gene-AD853_RS08140;Dbxref=GenBank:WP_038825001.1;Name=WP_038825001.1;gbkey=CDS;gene=creD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002220113.1;locus_tag=AD853_RS08140;product=cell envelope integrity protein CreD;protein_id=WP_038825001.1;transl_table=11 NZ_CPUY01000007.1 RefSeq gene 39049 39567 . - . ID=gene-AD853_RS08145;Name=fldB;gbkey=Gene;gene=fldB;gene_biotype=protein_coding;locus_tag=AD853_RS08145;old_locus_tag=ERS008462_01651 NZ_CPUY01000007.1 Protein Homology CDS 39049 39567 . - 0 ID=cds-WP_002209934.1;Parent=gene-AD853_RS08145;Dbxref=GenBank:WP_002209934.1;Name=WP_002209934.1;Ontology_term=GO:0009055,GO:0010181;gbkey=CDS;gene=fldB;go_function=electron transfer activity|0009055||IEA,FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209934.1;locus_tag=AD853_RS08145;product=flavodoxin FldB;protein_id=WP_002209934.1;transl_table=11 NZ_CPUY01000007.1 RefSeq gene 39674 40573 . + . ID=gene-AD853_RS08150;Name=xerD;gbkey=Gene;gene=xerD;gene_biotype=protein_coding;locus_tag=AD853_RS08150;old_locus_tag=ERS008462_01652 NZ_CPUY01000007.1 Protein Homology CDS 39674 40573 . + 0 ID=cds-WP_002209933.1;Parent=gene-AD853_RS08150;Dbxref=GenBank:WP_002209933.1;Name=WP_002209933.1;Ontology_term=GO:0006310,GO:0009009;gbkey=CDS;gene=xerD;go_function=site-specific recombinase activity|0009009||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209933.1;locus_tag=AD853_RS08150;product=site-specific tyrosine recombinase XerD;protein_id=WP_002209933.1;transl_table=11 NZ_CPUY01000007.1 RefSeq gene 40604 41320 . + . ID=gene-AD853_RS08155;Name=dsbC;gbkey=Gene;gene=dsbC;gene_biotype=protein_coding;locus_tag=AD853_RS08155;old_locus_tag=ERS008462_01653 NZ_CPUY01000007.1 Protein Homology CDS 40604 41320 . + 0 ID=cds-WP_002209932.1;Parent=gene-AD853_RS08155;Dbxref=GenBank:WP_002209932.1;Name=WP_002209932.1;Ontology_term=GO:0042597;gbkey=CDS;gene=dsbC;go_component=periplasmic space|0042597||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209932.1;locus_tag=AD853_RS08155;product=bifunctional protein-disulfide isomerase/oxidoreductase DsbC;protein_id=WP_002209932.1;transl_table=11 NZ_CPUY01000007.1 RefSeq gene 41327 43060 . + . ID=gene-AD853_RS08160;Name=recJ;gbkey=Gene;gene=recJ;gene_biotype=protein_coding;locus_tag=AD853_RS08160;old_locus_tag=ERS008462_01654 NZ_CPUY01000007.1 Protein Homology CDS 41327 43060 . + 0 ID=cds-WP_002209931.1;Parent=gene-AD853_RS08160;Dbxref=GenBank:WP_002209931.1;Name=WP_002209931.1;Ontology_term=GO:0006281,GO:0006310,GO:0008409;gbkey=CDS;gene=recJ;go_function=5'-3' exonuclease activity|0008409||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005166036.1;locus_tag=AD853_RS08160;product=single-stranded-DNA-specific exonuclease RecJ;protein_id=WP_002209931.1;transl_table=11 NZ_CPUY01000007.1 RefSeq gene 43239 44337 . + . ID=gene-AD853_RS08165;Name=prfB;gbkey=Gene;gene=prfB;gene_biotype=protein_coding;locus_tag=AD853_RS08165;old_locus_tag=ERS008462_01655 NZ_CPUY01000007.1 Protein Homology CDS 43239 43313 . + 0 ID=cds-WP_002228062.1;Parent=gene-AD853_RS08165;Dbxref=GenBank:WP_002228062.1;Name=WP_002228062.1;Note=programmed frameshift;Ontology_term=GO:0006415,GO:0016149,GO:0005737;exception=ribosomal slippage;gbkey=CDS;gene=prfB;go_component=cytoplasm|0005737||IEA;go_function=translation release factor activity%2C codon specific|0016149||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311790.1;locus_tag=AD853_RS08165;product=peptide chain release factor 2;protein_id=WP_002228062.1;transl_table=11 NZ_CPUY01000007.1 Protein Homology CDS 43315 44337 . + 0 ID=cds-WP_002228062.1;Parent=gene-AD853_RS08165;Dbxref=GenBank:WP_002228062.1;Name=WP_002228062.1;Note=programmed frameshift;Ontology_term=GO:0006415,GO:0016149,GO:0005737;exception=ribosomal slippage;gbkey=CDS;gene=prfB;go_component=cytoplasm|0005737||IEA;go_function=translation release factor activity%2C codon specific|0016149||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311790.1;locus_tag=AD853_RS08165;product=peptide chain release factor 2;protein_id=WP_002228062.1;transl_table=11 NZ_CPUY01000007.1 RefSeq gene 44347 45864 . + . ID=gene-AD853_RS08170;Name=lysS;gbkey=Gene;gene=lysS;gene_biotype=protein_coding;locus_tag=AD853_RS08170;old_locus_tag=ERS008462_01656 NZ_CPUY01000007.1 Protein Homology CDS 44347 45864 . + 0 ID=cds-WP_002209930.1;Parent=gene-AD853_RS08170;Dbxref=GenBank:WP_002209930.1;Name=WP_002209930.1;Ontology_term=GO:0006430,GO:0004824,GO:0005524,GO:0005737;gbkey=CDS;gene=lysS;go_component=cytoplasm|0005737||IEA;go_function=lysine-tRNA ligase activity|0004824||IEA,ATP binding|0005524||IEA;go_process=lysyl-tRNA aminoacylation|0006430||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012146591.1;locus_tag=AD853_RS08170;product=lysine--tRNA ligase;protein_id=WP_002209930.1;transl_table=11 NZ_CPUY01000007.1 RefSeq gene 46058 46131 . + . ID=gene-AD853_RS08175;Name=AD853_RS08175;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD853_RS08175;old_locus_tag=ERS008462_01657 NZ_CPUY01000007.1 tRNAscan-SE tRNA 46058 46131 . + . ID=rna-AD853_RS08175;Parent=gene-AD853_RS08175;anticodon=(pos:46090..46092);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD853_RS08175;product=tRNA-Gly NZ_CPUY01000007.1 tRNAscan-SE exon 46058 46131 . + . ID=exon-AD853_RS08175-1;Parent=rna-AD853_RS08175;anticodon=(pos:46090..46092);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD853_RS08175;product=tRNA-Gly NZ_CPUY01000007.1 RefSeq gene 46297 47511 . + . ID=gene-AD853_RS08180;Name=AD853_RS08180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS08180;old_locus_tag=ERS008462_01658 NZ_CPUY01000007.1 Protein Homology CDS 46297 47511 . + 0 ID=cds-WP_011192954.1;Parent=gene-AD853_RS08180;Dbxref=GenBank:WP_011192954.1;Name=WP_011192954.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192954.1;locus_tag=AD853_RS08180;product=tyrosine-type recombinase/integrase;protein_id=WP_011192954.1;transl_table=11 NZ_CPUY01000007.1 RefSeq gene 47593 47778 . - . ID=gene-AD853_RS08185;Name=AD853_RS08185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS08185;old_locus_tag=ERS008462_01659 NZ_CPUY01000007.1 Protein Homology CDS 47593 47778 . - 0 ID=cds-WP_002209928.1;Parent=gene-AD853_RS08185;Dbxref=GenBank:WP_002209928.1;Name=WP_002209928.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209928.1;locus_tag=AD853_RS08185;product=hypothetical protein;protein_id=WP_002209928.1;transl_table=11 NZ_CPUY01000007.1 RefSeq pseudogene 48376 48644 . + . ID=gene-AD853_RS08195;Name=AD853_RS08195;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD853_RS08195;pseudo=true NZ_CPUY01000007.1 Protein Homology CDS 48376 48644 . + 0 ID=cds-AD853_RS08195;Parent=gene-AD853_RS08195;Note=frameshifted;Ontology_term=GO:0017148,GO:0004521,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=RNA endonuclease activity|0004521||IEA;go_process=negative regulation of translation|0017148||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002214785.1;locus_tag=AD853_RS08195;product=type II toxin-antitoxin system RelE family toxin;pseudo=true;transl_table=11 NZ_CPUY01000007.1 RefSeq gene 48707 49069 . + . ID=gene-AD853_RS08200;Name=AD853_RS08200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS08200;old_locus_tag=ERS008462_01662 NZ_CPUY01000007.1 Protein Homology CDS 48707 49069 . + 0 ID=cds-WP_011192920.1;Parent=gene-AD853_RS08200;Dbxref=GenBank:WP_011192920.1;Name=WP_011192920.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192920.1;locus_tag=AD853_RS08200;product=helix-turn-helix domain-containing protein;protein_id=WP_011192920.1;transl_table=11 NZ_CPUY01000007.1 RefSeq gene 49233 49529 . + . ID=gene-AD853_RS08205;Name=AD853_RS08205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS08205;old_locus_tag=ERS008462_01663 NZ_CPUY01000007.1 Protein Homology CDS 49233 49529 . + 0 ID=cds-WP_024063131.1;Parent=gene-AD853_RS08205;Dbxref=GenBank:WP_024063131.1;Name=WP_024063131.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002214787.1;locus_tag=AD853_RS08205;product=type II toxin-antitoxin system MqsR family toxin;protein_id=WP_024063131.1;transl_table=11 NZ_CPUY01000007.1 RefSeq gene 49529 49927 . + . ID=gene-AD853_RS08210;Name=AD853_RS08210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS08210;old_locus_tag=ERS008462_01664 NZ_CPUY01000007.1 Protein Homology CDS 49529 49927 . + 0 ID=cds-WP_002209924.1;Parent=gene-AD853_RS08210;Dbxref=GenBank:WP_002209924.1;Name=WP_002209924.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209924.1;locus_tag=AD853_RS08210;product=type II toxin-antitoxin system MqsA family antitoxin;protein_id=WP_002209924.1;transl_table=11 NZ_CPUY01000007.1 RefSeq pseudogene 50318 52424 . - . ID=gene-AD853_RS08215;Name=AD853_RS08215;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD853_RS08215;old_locus_tag=ERS008462_01665;pseudo=true NZ_CPUY01000007.1 Protein Homology CDS 50318 52424 . - 0 ID=cds-AD853_RS08215;Parent=gene-AD853_RS08215;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209923.1;locus_tag=AD853_RS08215;product=primase-like DNA-binding domain-containing protein;pseudo=true;transl_table=11 NZ_CPUY01000007.1 RefSeq gene 52724 53050 . + . ID=gene-AD853_RS08220;Name=AD853_RS08220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS08220;old_locus_tag=ERS008462_01667 NZ_CPUY01000007.1 Protein Homology CDS 52724 53050 . + 0 ID=cds-WP_038824361.1;Parent=gene-AD853_RS08220;Dbxref=GenBank:WP_038824361.1;Name=WP_038824361.1;Ontology_term=GO:0004519,GO:0090729,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=endonuclease activity|0004519||IEA,toxin activity|0090729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209922.1;locus_tag=AD853_RS08220;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_038824361.1;transl_table=11 NZ_CPUY01000007.1 RefSeq gene 53043 53195 . + . ID=gene-AD853_RS21780;Name=AD853_RS21780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS21780 NZ_CPUY01000007.1 Protein Homology CDS 53043 53195 . + 0 ID=cds-WP_002209921.1;Parent=gene-AD853_RS21780;Dbxref=GenBank:WP_002209921.1;Name=WP_002209921.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005158307.1;locus_tag=AD853_RS21780;product=hypothetical protein;protein_id=WP_002209921.1;transl_table=11 NZ_CPUY01000007.1 RefSeq gene 53209 53409 . - . ID=gene-AD853_RS08230;Name=AD853_RS08230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS08230 NZ_CPUY01000007.1 Protein Homology CDS 53209 53409 . - 0 ID=cds-WP_002209920.1;Parent=gene-AD853_RS08230;Dbxref=GenBank:WP_002209920.1;Name=WP_002209920.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209920.1;locus_tag=AD853_RS08230;product=helix-turn-helix transcriptional regulator;protein_id=WP_002209920.1;transl_table=11 NZ_CPUY01000007.1 RefSeq pseudogene 53591 53910 . - . ID=gene-AD853_RS21785;Name=AD853_RS21785;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD853_RS21785;pseudo=true NZ_CPUY01000007.1 Protein Homology CDS 53591 53910 . - 0 ID=cds-AD853_RS21785;Parent=gene-AD853_RS21785;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002214791.1;locus_tag=AD853_RS21785;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CPUY01000007.1 RefSeq pseudogene 54025 54258 . - . ID=gene-AD853_RS21790;Name=AD853_RS21790;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD853_RS21790;partial=true;pseudo=true;start_range=.,54025 NZ_CPUY01000007.1 Protein Homology CDS 54025 54258 . - 0 ID=cds-AD853_RS21790;Parent=gene-AD853_RS21790;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002214792.1;locus_tag=AD853_RS21790;partial=true;product=hypothetical protein;pseudo=true;start_range=.,54025;transl_table=11 NZ_CPUY01000007.1 RefSeq gene 54271 54636 . - . ID=gene-AD853_RS08245;Name=AD853_RS08245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS08245;old_locus_tag=ERS008462_01669 NZ_CPUY01000007.1 Protein Homology CDS 54271 54636 . - 0 ID=cds-WP_002209919.1;Parent=gene-AD853_RS08245;Dbxref=GenBank:WP_002209919.1;Name=WP_002209919.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192915.1;locus_tag=AD853_RS08245;product=hypothetical protein;protein_id=WP_002209919.1;transl_table=11 NZ_CPUY01000007.1 RefSeq gene 54905 56047 . + . ID=gene-AD853_RS08250;Name=AD853_RS08250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS08250;old_locus_tag=ERS008462_01670 NZ_CPUY01000007.1 Protein Homology CDS 54905 56047 . + 0 ID=cds-WP_032465900.1;Parent=gene-AD853_RS08250;Dbxref=GenBank:WP_032465900.1;Name=WP_032465900.1;Ontology_term=GO:0000287,GO:0005524,GO:0042803;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,ATP binding|0005524||IEA,protein homodimerization activity|0042803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011906176.1;locus_tag=AD853_RS08250;product=Fic family protein;protein_id=WP_032465900.1;transl_table=11 NZ_CPUY01000007.1 RefSeq gene 56547 58079 . + . ID=gene-AD853_RS08255;Name=AD853_RS08255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS08255;old_locus_tag=ERS008462_01671 NZ_CPUY01000007.1 Protein Homology CDS 56547 58079 . + 0 ID=cds-WP_011192914.1;Parent=gene-AD853_RS08255;Dbxref=GenBank:WP_011192914.1;Name=WP_011192914.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012230138.1;locus_tag=AD853_RS08255;product=S-type pyocin domain-containing protein;protein_id=WP_011192914.1;transl_table=11 NZ_CPUY01000007.1 RefSeq gene 58079 58273 . + . ID=gene-AD853_RS08260;Name=AD853_RS08260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS08260;old_locus_tag=ERS008462_01672 NZ_CPUY01000007.1 Protein Homology CDS 58079 58273 . + 0 ID=cds-WP_033852438.1;Parent=gene-AD853_RS08260;Dbxref=GenBank:WP_033852438.1;Name=WP_033852438.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002214795.1;locus_tag=AD853_RS08260;product=CPCC family cysteine-rich protein;protein_id=WP_033852438.1;transl_table=11 NZ_CPUY01000007.1 RefSeq gene 58611 58814 . + . ID=gene-AD853_RS08265;Name=AD853_RS08265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS08265;old_locus_tag=ERS008462_01673 NZ_CPUY01000007.1 Protein Homology CDS 58611 58814 . + 0 ID=cds-WP_002209915.1;Parent=gene-AD853_RS08265;Dbxref=GenBank:WP_002209915.1;Name=WP_002209915.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209915.1;locus_tag=AD853_RS08265;product=hypothetical protein;protein_id=WP_002209915.1;transl_table=11 NZ_CPUY01000007.1 RefSeq gene 58861 59145 . + . ID=gene-AD853_RS08270;Name=AD853_RS08270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS08270;old_locus_tag=ERS008462_01674 NZ_CPUY01000007.1 Protein Homology CDS 58861 59145 . + 0 ID=cds-WP_011192913.1;Parent=gene-AD853_RS08270;Dbxref=GenBank:WP_011192913.1;Name=WP_011192913.1;Ontology_term=GO:0030153,GO:0015643;gbkey=CDS;go_function=toxic substance binding|0015643||IEA;go_process=bacteriocin immunity|0030153||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192913.1;locus_tag=AD853_RS08270;product=colicin immunity domain-containing protein;protein_id=WP_011192913.1;transl_table=11 NZ_CPUY01000007.1 RefSeq pseudogene 59555 61687 . + . ID=gene-AD853_RS08275;Name=AD853_RS08275;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD853_RS08275;old_locus_tag=ERS008462_01675;pseudo=true NZ_CPUY01000007.1 Protein Homology CDS 59555 61687 . + 0 ID=cds-AD853_RS08275;Parent=gene-AD853_RS08275;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012413884.1;locus_tag=AD853_RS08275;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CPUY01000007.1 RefSeq gene 61657 62424 . + . ID=gene-AD853_RS08280;Name=AD853_RS08280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS08280;old_locus_tag=ERS008462_01677 NZ_CPUY01000007.1 Protein Homology CDS 61657 62424 . + 0 ID=cds-WP_002209913.1;Parent=gene-AD853_RS08280;Dbxref=GenBank:WP_002209913.1;Name=WP_002209913.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209913.1;locus_tag=AD853_RS08280;product=DUF3142 domain-containing protein;protein_id=WP_002209913.1;transl_table=11 NZ_CPUY01000007.1 RefSeq gene 63031 63810 . + . ID=gene-AD853_RS08290;Name=AD853_RS08290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS08290;old_locus_tag=ERS008462_01678 NZ_CPUY01000007.1 Protein Homology CDS 63031 63810 . + 0 ID=cds-WP_038824379.1;Parent=gene-AD853_RS08290;Dbxref=GenBank:WP_038824379.1;Name=WP_038824379.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209912.1;locus_tag=AD853_RS08290;product=hypothetical protein;protein_id=WP_038824379.1;transl_table=11 NZ_CPUY01000007.1 RefSeq gene 64067 64333 . + . ID=gene-AD853_RS08295;Name=AD853_RS08295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS08295;old_locus_tag=ERS008462_01679 NZ_CPUY01000007.1 Protein Homology CDS 64067 64333 . + 0 ID=cds-WP_012303726.1;Parent=gene-AD853_RS08295;Dbxref=GenBank:WP_012303726.1;Name=WP_012303726.1;Ontology_term=GO:0008270;gbkey=CDS;go_function=zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209911.1;locus_tag=AD853_RS08295;product=PAAR domain-containing protein;protein_id=WP_012303726.1;transl_table=11 NZ_CPUY01000007.1 RefSeq gene 64432 64752 . - . ID=gene-AD853_RS08300;Name=AD853_RS08300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS08300;old_locus_tag=ERS008462_01680 NZ_CPUY01000007.1 Protein Homology CDS 64432 64752 . - 0 ID=cds-WP_011192910.1;Parent=gene-AD853_RS08300;Dbxref=GenBank:WP_011192910.1;Name=WP_011192910.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209910.1;locus_tag=AD853_RS08300;product=DUF3861 domain-containing protein;protein_id=WP_011192910.1;transl_table=11 NZ_CPUY01000007.1 RefSeq gene 64752 65432 . - . ID=gene-AD853_RS08305;Name=AD853_RS08305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS08305;old_locus_tag=ERS008462_01681 NZ_CPUY01000007.1 Protein Homology CDS 64752 65432 . - 0 ID=cds-WP_011192909.1;Parent=gene-AD853_RS08305;Dbxref=GenBank:WP_011192909.1;Name=WP_011192909.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192909.1;locus_tag=AD853_RS08305;product=PadR family transcriptional regulator;protein_id=WP_011192909.1;transl_table=11 NZ_CPUY01000007.1 RefSeq pseudogene 65728 65913 . + . ID=gene-AD853_RS22150;Name=AD853_RS22150;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD853_RS22150;partial=true;pseudo=true;start_range=.,65728 NZ_CPUY01000007.1 Protein Homology CDS 65728 65913 . + 0 ID=cds-AD853_RS22150;Parent=gene-AD853_RS22150;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004107092.1;locus_tag=AD853_RS22150;partial=true;product=helix-turn-helix domain-containing protein;pseudo=true;start_range=.,65728;transl_table=11 NZ_CPUY01000007.1 RefSeq gene 65875 66732 . - . ID=gene-AD853_RS08310;Name=AD853_RS08310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS08310;old_locus_tag=ERS008462_01682 NZ_CPUY01000007.1 Protein Homology CDS 65875 66732 . - 0 ID=cds-WP_038824380.1;Parent=gene-AD853_RS08310;Dbxref=GenBank:WP_038824380.1;Name=WP_038824380.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012104689.1;locus_tag=AD853_RS08310;product=YaeF family permuted papain-like enzyme;protein_id=WP_038824380.1;transl_table=11 NZ_CPUY01000007.1 RefSeq gene 67108 67626 . - . ID=gene-AD853_RS08315;Name=AD853_RS08315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS08315 NZ_CPUY01000007.1 Protein Homology CDS 67108 67626 . - 0 ID=cds-WP_002209907.1;Parent=gene-AD853_RS08315;Dbxref=GenBank:WP_002209907.1;Name=WP_002209907.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209907.1;locus_tag=AD853_RS08315;product=hypothetical protein;protein_id=WP_002209907.1;transl_table=11 NZ_CPUY01000007.1 RefSeq gene 68405 69406 . - . ID=gene-AD853_RS08320;Name=AD853_RS08320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS08320;old_locus_tag=ERS008462_01684 NZ_CPUY01000007.1 Protein Homology CDS 68405 69406 . - 0 ID=cds-WP_002209906.1;Parent=gene-AD853_RS08320;Dbxref=GenBank:WP_002209906.1;Name=WP_002209906.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002422709.1;locus_tag=AD853_RS08320;product=substrate-binding domain-containing protein;protein_id=WP_002209906.1;transl_table=11 NZ_CPUY01000007.1 RefSeq gene 69825 70829 . - . ID=gene-AD853_RS08325;Name=AD853_RS08325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS08325;old_locus_tag=ERS008462_01685 NZ_CPUY01000007.1 Protein Homology CDS 69825 70829 . - 0 ID=cds-WP_038824381.1;Parent=gene-AD853_RS08325;Dbxref=GenBank:WP_038824381.1;Name=WP_038824381.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209904.1;locus_tag=AD853_RS08325;product=ABC transporter permease;protein_id=WP_038824381.1;transl_table=11 NZ_CPUY01000007.1 RefSeq gene 70900 72408 . - . ID=gene-AD853_RS08330;Name=AD853_RS08330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS08330;old_locus_tag=ERS008462_01686 NZ_CPUY01000007.1 Protein Homology CDS 70900 72408 . - 0 ID=cds-WP_038824382.1;Parent=gene-AD853_RS08330;Dbxref=GenBank:WP_038824382.1;Name=WP_038824382.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012104694.1;locus_tag=AD853_RS08330;product=sugar ABC transporter ATP-binding protein;protein_id=WP_038824382.1;transl_table=11 NZ_CPUY01000007.1 RefSeq gene 72930 74036 . - . ID=gene-AD853_RS08335;Name=AD853_RS08335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS08335;old_locus_tag=ERS008462_01687 NZ_CPUY01000007.1 Protein Homology CDS 72930 74036 . - 0 ID=cds-WP_038824384.1;Parent=gene-AD853_RS08335;Dbxref=GenBank:WP_038824384.1;Name=WP_038824384.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209902.1;locus_tag=AD853_RS08335;product=ABC transporter ATP-binding protein;protein_id=WP_038824384.1;transl_table=11 NZ_CPUY01000007.1 RefSeq gene 74399 75634 . + . ID=gene-AD853_RS08340;Name=AD853_RS08340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS08340;old_locus_tag=ERS008462_01688 NZ_CPUY01000007.1 Protein Homology CDS 74399 75634 . + 0 ID=cds-WP_002209901.1;Parent=gene-AD853_RS08340;Dbxref=GenBank:WP_002209901.1;Name=WP_002209901.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225470.1;locus_tag=AD853_RS08340;product=extracellular solute-binding protein;protein_id=WP_002209901.1;transl_table=11 NZ_CPUY01000007.1 RefSeq gene 75794 77101 . + . ID=gene-AD853_RS08345;Name=AD853_RS08345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS08345;old_locus_tag=ERS008462_01689 NZ_CPUY01000007.1 Protein Homology CDS 75794 77101 . + 0 ID=cds-WP_002209900.1;Parent=gene-AD853_RS08345;Dbxref=GenBank:WP_002209900.1;Name=WP_002209900.1;Ontology_term=GO:0008643,GO:0055085,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004964623.1;locus_tag=AD853_RS08345;product=carbohydrate ABC transporter permease;protein_id=WP_002209900.1;transl_table=11 NZ_CPUY01000007.1 RefSeq gene 77113 77964 . + . ID=gene-AD853_RS08350;Name=AD853_RS08350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS08350;old_locus_tag=ERS008462_01690 NZ_CPUY01000007.1 Protein Homology CDS 77113 77964 . + 0 ID=cds-WP_002209899.1;Parent=gene-AD853_RS08350;Dbxref=GenBank:WP_002209899.1;Name=WP_002209899.1;Ontology_term=GO:0008643,GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225472.1;locus_tag=AD853_RS08350;product=sugar ABC transporter permease;protein_id=WP_002209899.1;transl_table=11 NZ_CPUY01000007.1 RefSeq gene 77969 79171 . + . ID=gene-AD853_RS08355;Name=AD853_RS08355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS08355;old_locus_tag=ERS008462_01691 NZ_CPUY01000007.1 Protein Homology CDS 77969 79171 . + 0 ID=cds-WP_002209898.1;Parent=gene-AD853_RS08355;Dbxref=GenBank:WP_002209898.1;Name=WP_002209898.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225473.1;locus_tag=AD853_RS08355;product=glycoside hydrolase family 53 protein;protein_id=WP_002209898.1;transl_table=11 NZ_CPUY01000007.1 RefSeq gene 79222 81282 . + . ID=gene-AD853_RS08360;Name=AD853_RS08360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS08360;old_locus_tag=ERS008462_01692 NZ_CPUY01000007.1 Protein Homology CDS 79222 81282 . + 0 ID=cds-WP_038824385.1;Parent=gene-AD853_RS08360;Dbxref=GenBank:WP_038824385.1;Name=WP_038824385.1;Ontology_term=GO:0006012,GO:0004565,GO:0046872,GO:0009341;gbkey=CDS;go_component=beta-galactosidase complex|0009341||IEA;go_function=beta-galactosidase activity|0004565||IEA,metal ion binding|0046872||IEA;go_process=galactose metabolic process|0006012||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209897.1;locus_tag=AD853_RS08360;product=beta-galactosidase;protein_id=WP_038824385.1;transl_table=11 NZ_CPUY01000007.1 RefSeq gene 81394 81705 . + . ID=gene-AD853_RS08365;Name=AD853_RS08365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS08365;old_locus_tag=ERS008462_01693 NZ_CPUY01000007.1 Protein Homology CDS 81394 81705 . + 0 ID=cds-WP_002209896.1;Parent=gene-AD853_RS08365;Dbxref=GenBank:WP_002209896.1;Name=WP_002209896.1;Ontology_term=GO:0009401,GO:0008982;gbkey=CDS;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209896.1;locus_tag=AD853_RS08365;product=glucose PTS transporter subunit EIIB;protein_id=WP_002209896.1;transl_table=11 NZ_CPUY01000007.1 RefSeq gene 82062 83321 . - . ID=gene-AD853_RS08370;Name=AD853_RS08370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS08370;old_locus_tag=ERS008462_01694 NZ_CPUY01000007.1 Protein Homology CDS 82062 83321 . - 0 ID=cds-WP_011192907.1;Parent=gene-AD853_RS08370;Dbxref=GenBank:WP_011192907.1;Name=WP_011192907.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004177240.1;locus_tag=AD853_RS08370;product=maltoporin;protein_id=WP_011192907.1;transl_table=11 NZ_CPUY01000007.1 RefSeq gene 83593 84666 . + . ID=gene-AD853_RS08375;Name=AD853_RS08375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS08375;old_locus_tag=ERS008462_01695 NZ_CPUY01000007.1 Protein Homology CDS 83593 84666 . + 0 ID=cds-WP_002209894.1;Parent=gene-AD853_RS08375;Dbxref=GenBank:WP_002209894.1;Name=WP_002209894.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012104696.1;locus_tag=AD853_RS08375;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_002209894.1;transl_table=11 NZ_CPUY01000007.1 RefSeq gene 84978 87353 . - . ID=gene-AD853_RS08380;Name=AD853_RS08380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS08380;old_locus_tag=ERS008462_01696 NZ_CPUY01000007.1 Protein Homology CDS 84978 87353 . - 0 ID=cds-WP_038825110.1;Parent=gene-AD853_RS08380;Dbxref=GenBank:WP_038825110.1;Name=WP_038825110.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209892.1;locus_tag=AD853_RS08380;product=glycoside hydrolase family 31 protein;protein_id=WP_038825110.1;transl_table=11 NZ_CPUY01000007.1 RefSeq gene 87502 88809 . - . ID=gene-AD853_RS08385;Name=AD853_RS08385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS08385;old_locus_tag=ERS008462_01697 NZ_CPUY01000007.1 Protein Homology CDS 87502 88809 . - 0 ID=cds-WP_038825111.1;Parent=gene-AD853_RS08385;Dbxref=GenBank:WP_038825111.1;Name=WP_038825111.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011906179.1;locus_tag=AD853_RS08385;product=MFS transporter;protein_id=WP_038825111.1;transl_table=11 NZ_CPUY01000007.1 RefSeq gene 89203 90285 . + . ID=gene-AD853_RS08390;Name=AD853_RS08390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS08390;old_locus_tag=ERS008462_01698 NZ_CPUY01000007.1 Protein Homology CDS 89203 90285 . + 0 ID=cds-WP_038825112.1;Parent=gene-AD853_RS08390;Dbxref=GenBank:WP_038825112.1;Name=WP_038825112.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209890.1;locus_tag=AD853_RS08390;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_038825112.1;transl_table=11 NZ_CPUY01000007.1 RefSeq gene 90275 90538 . + . ID=gene-AD853_RS22485;Name=AD853_RS22485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS22485;old_locus_tag=ERS008462_01699 NZ_CPUY01000007.1 Protein Homology CDS 90275 90538 . + 0 ID=cds-WP_038825114.1;Parent=gene-AD853_RS22485;Dbxref=GenBank:WP_038825114.1;Name=WP_038825114.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192904.1;locus_tag=AD853_RS22485;product=hypothetical protein;protein_id=WP_038825114.1;transl_table=11 NZ_CPUY01000007.1 RefSeq gene 90508 91086 . - . ID=gene-AD853_RS08400;Name=AD853_RS08400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS08400;old_locus_tag=ERS008462_01700 NZ_CPUY01000007.1 Protein Homology CDS 90508 91086 . - 0 ID=cds-WP_038825115.1;Parent=gene-AD853_RS08400;Dbxref=GenBank:WP_038825115.1;Name=WP_038825115.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015683554.1;locus_tag=AD853_RS08400;product=DJ-1/PfpI family protein;protein_id=WP_038825115.1;transl_table=11 NZ_CPUY01000007.1 RefSeq gene 91110 91964 . - . ID=gene-AD853_RS08405;Name=AD853_RS08405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS08405;old_locus_tag=ERS008462_01701 NZ_CPUY01000007.1 Protein Homology CDS 91110 91964 . - 0 ID=cds-WP_011192902.1;Parent=gene-AD853_RS08405;Dbxref=GenBank:WP_011192902.1;Name=WP_011192902.1;Ontology_term=GO:0005975,GO:0008270,GO:0009025;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,tagatose-bisphosphate aldolase activity|0009025||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192902.1;locus_tag=AD853_RS08405;product=tagatose bisphosphate family class II aldolase;protein_id=WP_011192902.1;transl_table=11 NZ_CPUY01000007.1 RefSeq gene 92075 93562 . - . ID=gene-AD853_RS08410;Name=AD853_RS08410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS08410;old_locus_tag=ERS008462_01702 NZ_CPUY01000007.1 Protein Homology CDS 92075 93562 . - 0 ID=cds-WP_038825116.1;Parent=gene-AD853_RS08410;Dbxref=GenBank:WP_038825116.1;Name=WP_038825116.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012303733.1;locus_tag=AD853_RS08410;product=DUF2264 domain-containing protein;protein_id=WP_038825116.1;transl_table=11 NZ_CPUY01000007.1 RefSeq gene 93685 95292 . - . ID=gene-AD853_RS08415;Name=AD853_RS08415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS08415;old_locus_tag=ERS008462_01703 NZ_CPUY01000007.1 Protein Homology CDS 93685 95292 . - 0 ID=cds-WP_012303734.1;Parent=gene-AD853_RS08415;Dbxref=GenBank:WP_012303734.1;Name=WP_012303734.1;Ontology_term=GO:0008484,GO:0046872;gbkey=CDS;go_function=sulfuric ester hydrolase activity|0008484||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192900.1;locus_tag=AD853_RS08415;product=sulfatase family protein;protein_id=WP_012303734.1;transl_table=11 NZ_CPUY01000007.1 RefSeq pseudogene 95313 96540 . - . ID=gene-AD853_RS08420;Name=AD853_RS08420;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD853_RS08420;old_locus_tag=ERS008462_01705;pseudo=true NZ_CPUY01000007.1 Protein Homology CDS 95313 96540 . - 0 ID=cds-AD853_RS08420;Parent=gene-AD853_RS08420;Note=frameshifted;Ontology_term=GO:0018209,GO:0046500,GO:0016491,GO:0051539;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=peptidyl-serine modification|0018209||IEA,S-adenosylmethionine metabolic process|0046500||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012229928.1;locus_tag=AD853_RS08420;product=anaerobic sulfatase maturase;pseudo=true;transl_table=11 NZ_CPUY01000007.1 RefSeq gene 96784 97830 . - . ID=gene-AD853_RS08425;Name=AD853_RS08425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS08425;old_locus_tag=ERS008462_01706 NZ_CPUY01000007.1 Protein Homology CDS 96784 97830 . - 0 ID=cds-WP_072080793.1;Parent=gene-AD853_RS08425;Dbxref=GenBank:WP_072080793.1;Name=WP_072080793.1;Ontology_term=GO:0005975,GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209884.1;locus_tag=AD853_RS08425;product=glycoside hydrolase family 88/105 protein;protein_id=WP_072080793.1;transl_table=11 NZ_CPUY01000007.1 RefSeq gene 97846 98601 . - . ID=gene-AD853_RS08430;Name=kduD;gbkey=Gene;gene=kduD;gene_biotype=protein_coding;locus_tag=AD853_RS08430;old_locus_tag=ERS008462_01707 NZ_CPUY01000007.1 Protein Homology CDS 97846 98601 . - 0 ID=cds-WP_012104704.1;Parent=gene-AD853_RS08430;Dbxref=GenBank:WP_012104704.1;Name=WP_012104704.1;Ontology_term=GO:0000272,GO:0016491,GO:0051287;gbkey=CDS;gene=kduD;go_function=oxidoreductase activity|0016491||IEA,NAD binding|0051287||IEA;go_process=polysaccharide catabolic process|0000272||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209883.1;locus_tag=AD853_RS08430;product=2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase KduD;protein_id=WP_012104704.1;transl_table=11 NZ_CPUY01000007.1 RefSeq gene 98797 99963 . - . ID=gene-AD853_RS08435;Name=nagA;gbkey=Gene;gene=nagA;gene_biotype=protein_coding;locus_tag=AD853_RS08435;old_locus_tag=ERS008462_01708 NZ_CPUY01000007.1 Protein Homology CDS 98797 99963 . - 0 ID=cds-WP_038825675.1;Parent=gene-AD853_RS08435;Dbxref=GenBank:WP_038825675.1;Name=WP_038825675.1;Ontology_term=GO:0006044,GO:0008448;gbkey=CDS;gene=nagA;go_function=N-acetylglucosamine-6-phosphate deacetylase activity|0008448||IEA;go_process=N-acetylglucosamine metabolic process|0006044||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209882.1;locus_tag=AD853_RS08435;product=N-acetylglucosamine-6-phosphate deacetylase;protein_id=WP_038825675.1;transl_table=11 NZ_CPUY01000007.1 RefSeq gene 99966 100406 . - . ID=gene-AD853_RS08440;Name=agaF;gbkey=Gene;gene=agaF;gene_biotype=protein_coding;locus_tag=AD853_RS08440;old_locus_tag=ERS008462_01709 NZ_CPUY01000007.1 Protein Homology CDS 99966 100406 . - 0 ID=cds-WP_012104706.1;Parent=gene-AD853_RS08440;Dbxref=GenBank:WP_012104706.1;Name=WP_012104706.1;gbkey=CDS;gene=agaF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012104706.1;locus_tag=AD853_RS08440;product=PTS galactosamine/N-acetylgalactosamine transporter subunit IIA;protein_id=WP_012104706.1;transl_table=11 NZ_CPUY01000007.1 RefSeq gene 100492 101382 . - . ID=gene-AD853_RS08445;Name=AD853_RS08445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS08445;old_locus_tag=ERS008462_01710 NZ_CPUY01000007.1 Protein Homology CDS 100492 101382 . - 0 ID=cds-WP_002209880.1;Parent=gene-AD853_RS08445;Dbxref=GenBank:WP_002209880.1;Name=WP_002209880.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:0016301,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_function=kinase activity|0016301||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000135474.1;locus_tag=AD853_RS08445;product=PTS system mannose/fructose/sorbose family transporter subunit IID;protein_id=WP_002209880.1;transl_table=11 NZ_CPUY01000007.1 RefSeq gene 101372 102160 . - . ID=gene-AD853_RS08450;Name=agaW;gbkey=Gene;gene=agaW;gene_biotype=protein_coding;locus_tag=AD853_RS08450;old_locus_tag=ERS008462_01711 NZ_CPUY01000007.1 Protein Homology CDS 101372 102160 . - 0 ID=cds-WP_002209879.1;Parent=gene-AD853_RS08450;Dbxref=GenBank:WP_002209879.1;Name=WP_002209879.1;gbkey=CDS;gene=agaW;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209879.1;locus_tag=AD853_RS08450;product=PTS N-acetylgalactosamine transporter subunit IIC;protein_id=WP_002209879.1;transl_table=11 NZ_CPUY01000007.1 RefSeq gene 102207 102704 . - . ID=gene-AD853_RS08455;Name=agaV;gbkey=Gene;gene=agaV;gene_biotype=protein_coding;locus_tag=AD853_RS08455;old_locus_tag=ERS008462_01712 NZ_CPUY01000007.1 Protein Homology CDS 102207 102704 . - 0 ID=cds-WP_002209878.1;Parent=gene-AD853_RS08455;Dbxref=GenBank:WP_002209878.1;Name=WP_002209878.1;gbkey=CDS;gene=agaV;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015683876.1;locus_tag=AD853_RS08455;product=PTS N-acetylgalactosamine transporter subunit IIB;protein_id=WP_002209878.1;transl_table=11 NZ_CPUY01000007.1 RefSeq gene 102722 103888 . - . ID=gene-AD853_RS08460;Name=AD853_RS08460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS08460;old_locus_tag=ERS008462_01713 NZ_CPUY01000007.1 Protein Homology CDS 102722 103888 . - 0 ID=cds-WP_011192898.1;Parent=gene-AD853_RS08460;Dbxref=GenBank:WP_011192898.1;Name=WP_011192898.1;Ontology_term=GO:1901135,GO:0097367;gbkey=CDS;go_function=carbohydrate derivative binding|0097367||IEA;go_process=carbohydrate derivative metabolic process|1901135||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012413880.1;locus_tag=AD853_RS08460;product=SIS domain-containing protein;protein_id=WP_011192898.1;transl_table=11 NZ_CPUY01000007.1 RefSeq gene 103885 105183 . - . ID=gene-AD853_RS08465;Name=kbaZ;gbkey=Gene;gene=kbaZ;gene_biotype=protein_coding;locus_tag=AD853_RS08465;old_locus_tag=ERS008462_01714 NZ_CPUY01000007.1 Protein Homology CDS 103885 105183 . - 0 ID=cds-WP_012413879.1;Parent=gene-AD853_RS08465;Dbxref=GenBank:WP_012413879.1;Name=WP_012413879.1;gbkey=CDS;gene=kbaZ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012104707.1;locus_tag=AD853_RS08465;product=tagatose-bisphosphate aldolase subunit KbaZ;protein_id=WP_012413879.1;transl_table=11 NZ_CPUY01000007.1 RefSeq gene 105233 106009 . - . ID=gene-AD853_RS08470;Name=agaR;gbkey=Gene;gene=agaR;gene_biotype=protein_coding;locus_tag=AD853_RS08470;old_locus_tag=ERS008462_01715 NZ_CPUY01000007.1 Protein Homology CDS 105233 106009 . - 0 ID=cds-WP_002209875.1;Parent=gene-AD853_RS08470;Dbxref=GenBank:WP_002209875.1;Name=WP_002209875.1;gbkey=CDS;gene=agaR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000642265.1;locus_tag=AD853_RS08470;product=transcriptional repressor AgaR;protein_id=WP_002209875.1;transl_table=11 NZ_CPUY01000007.1 RefSeq gene 106850 108403 . + . ID=gene-AD853_RS08475;Name=AD853_RS08475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS08475;old_locus_tag=ERS008462_01716 NZ_CPUY01000007.1 Protein Homology CDS 106850 108403 . + 0 ID=cds-WP_038825118.1;Parent=gene-AD853_RS08475;Dbxref=GenBank:WP_038825118.1;Name=WP_038825118.1;Ontology_term=GO:0008484;gbkey=CDS;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192896.1;locus_tag=AD853_RS08475;product=sulfatase family protein;protein_id=WP_038825118.1;transl_table=11 NZ_CPUY01000007.1 RefSeq gene 108843 111956 . - . ID=gene-AD853_RS08480;Name=AD853_RS08480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS08480;old_locus_tag=ERS008462_01717 NZ_CPUY01000007.1 Protein Homology CDS 108843 111956 . - 0 ID=cds-WP_038824405.1;Parent=gene-AD853_RS08480;Dbxref=GenBank:WP_038824405.1;Name=WP_038824405.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002214081.1;locus_tag=AD853_RS08480;product=chondroitinase family polysaccharide lyase;protein_id=WP_038824405.1;transl_table=11 NZ_CPUY01000007.1 RefSeq gene 112026 114212 . - . ID=gene-AD853_RS08485;Name=yapM;gbkey=Gene;gene=yapM;gene_biotype=protein_coding;locus_tag=AD853_RS08485;old_locus_tag=ERS008462_01718 NZ_CPUY01000007.1 Protein Homology CDS 112026 114212 . - 0 ID=cds-WP_038824406.1;Parent=gene-AD853_RS08485;Dbxref=GenBank:WP_038824406.1;Name=WP_038824406.1;gbkey=CDS;gene=yapM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209869.1;locus_tag=AD853_RS08485;product=autotransporter YapM;protein_id=WP_038824406.1;transl_table=11 NZ_CPUY01000007.1 RefSeq pseudogene 114327 115278 . - . ID=gene-AD853_RS08490;Name=AD853_RS08490;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD853_RS08490;pseudo=true NZ_CPUY01000007.1 Protein Homology CDS 114327 115278 . - 0 ID=cds-AD853_RS08490;Parent=gene-AD853_RS08490;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002428232.1;locus_tag=AD853_RS08490;product=OmpG porin family protein;pseudo=true;transl_table=11 NZ_CPUY01000007.1 RefSeq gene 115881 116069 . - . ID=gene-AD853_RS08500;Name=AD853_RS08500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS08500;old_locus_tag=ERS008462_01721 NZ_CPUY01000007.1 Protein Homology CDS 115881 116069 . - 0 ID=cds-WP_038824407.1;Parent=gene-AD853_RS08500;Dbxref=GenBank:WP_038824407.1;Name=WP_038824407.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002214085.1;locus_tag=AD853_RS08500;product=hypothetical protein;protein_id=WP_038824407.1;transl_table=11 NZ_CPUY01000007.1 RefSeq gene 116565 117320 . + . ID=gene-AD853_RS08505;Name=AD853_RS08505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS08505;old_locus_tag=ERS008462_01722 NZ_CPUY01000007.1 Protein Homology CDS 116565 117320 . + 0 ID=cds-WP_002220090.1;Parent=gene-AD853_RS08505;Dbxref=GenBank:WP_002220090.1;Name=WP_002220090.1;Ontology_term=GO:0004089,GO:0008270;gbkey=CDS;go_function=carbonate dehydratase activity|0004089||IEA,zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002220090.1;locus_tag=AD853_RS08505;product=carbonic anhydrase;protein_id=WP_002220090.1;transl_table=11 NZ_CPUY01000007.1 RefSeq gene 118063 118479 . + . ID=gene-AD853_RS08510;Name=AD853_RS08510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS08510;old_locus_tag=ERS008462_01723 NZ_CPUY01000007.1 Protein Homology CDS 118063 118479 . + 0 ID=cds-WP_002209866.1;Parent=gene-AD853_RS08510;Dbxref=GenBank:WP_002209866.1;Name=WP_002209866.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209866.1;locus_tag=AD853_RS08510;product=winged helix-turn-helix domain-containing protein;protein_id=WP_002209866.1;transl_table=11 NZ_CPUY01000007.1 RefSeq gene 118651 119052 . + . ID=gene-AD853_RS08515;Name=AD853_RS08515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS08515;old_locus_tag=ERS008462_01724 NZ_CPUY01000007.1 Protein Homology CDS 118651 119052 . + 0 ID=cds-WP_002209865.1;Parent=gene-AD853_RS08515;Dbxref=GenBank:WP_002209865.1;Name=WP_002209865.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209865.1;locus_tag=AD853_RS08515;product=type II secretion system protein N;protein_id=WP_002209865.1;transl_table=11 NZ_CPUY01000007.1 RefSeq gene 119133 121055 . + . ID=gene-AD853_RS08520;Name=gspD;gbkey=Gene;gene=gspD;gene_biotype=protein_coding;locus_tag=AD853_RS08520;old_locus_tag=ERS008462_01725 NZ_CPUY01000007.1 Protein Homology CDS 119133 121055 . + 0 ID=cds-WP_002220086.1;Parent=gene-AD853_RS08520;Dbxref=GenBank:WP_002220086.1;Name=WP_002220086.1;Ontology_term=GO:0015628,GO:0015627,GO:0019867;gbkey=CDS;gene=gspD;go_component=type II protein secretion system complex|0015627||IEA,outer membrane|0019867||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209864.1;locus_tag=AD853_RS08520;product=type II secretion system secretin GspD;protein_id=WP_002220086.1;transl_table=11 NZ_CPUY01000007.1 RefSeq gene 121052 122563 . + . ID=gene-AD853_RS08525;Name=gspE;gbkey=Gene;gene=gspE;gene_biotype=protein_coding;locus_tag=AD853_RS08525;old_locus_tag=ERS008462_01726 NZ_CPUY01000007.1 Protein Homology CDS 121052 122563 . + 0 ID=cds-WP_038824408.1;Parent=gene-AD853_RS08525;Dbxref=GenBank:WP_038824408.1;Name=WP_038824408.1;Ontology_term=GO:0015628,GO:0005524,GO:0015627;gbkey=CDS;gene=gspE;go_component=type II protein secretion system complex|0015627||IEA;go_function=ATP binding|0005524||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209863.1;locus_tag=AD853_RS08525;product=type II secretion system ATPase GspE;protein_id=WP_038824408.1;transl_table=11 NZ_CPUY01000007.1 RefSeq gene 122550 123752 . + . ID=gene-AD853_RS08530;Name=AD853_RS08530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS08530;old_locus_tag=ERS008462_01727 NZ_CPUY01000007.1 Protein Homology CDS 122550 123752 . + 0 ID=cds-WP_157185916.1;Parent=gene-AD853_RS08530;Dbxref=GenBank:WP_157185916.1;Name=WP_157185916.1;Ontology_term=GO:0015628,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012413877.1;locus_tag=AD853_RS08530;product=type II secretion system F family protein;protein_id=WP_157185916.1;transl_table=11 NZ_CPUY01000007.1 RefSeq gene 123772 124209 . + . ID=gene-AD853_RS08535;Name=gspG;gbkey=Gene;gene=gspG;gene_biotype=protein_coding;locus_tag=AD853_RS08535;old_locus_tag=ERS008462_01728 NZ_CPUY01000007.1 Protein Homology CDS 123772 124209 . + 0 ID=cds-WP_002209862.1;Parent=gene-AD853_RS08535;Dbxref=GenBank:WP_002209862.1;Name=WP_002209862.1;Ontology_term=GO:0015628,GO:0015627;gbkey=CDS;gene=gspG;go_component=type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209862.1;locus_tag=AD853_RS08535;product=type II secretion system major pseudopilin GspG;protein_id=WP_002209862.1;transl_table=11 NZ_CPUY01000007.1 RefSeq pseudogene 124214 124276 . + . ID=gene-AD853_RS22155;Name=AD853_RS22155;end_range=124276,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD853_RS22155;partial=true;pseudo=true NZ_CPUY01000007.1 Protein Homology CDS 124214 124276 . + 0 ID=cds-AD853_RS22155;Parent=gene-AD853_RS22155;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=124276,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019575.6;locus_tag=AD853_RS22155;partial=true;product=prepilin-type N-terminal cleavage/methylation domain-containing protein;pseudo=true;transl_table=11 NZ_CPUY01000007.1 RefSeq gene 124325 124756 . + . ID=gene-AD853_RS08540;Name=AD853_RS08540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS08540;old_locus_tag=ERS008462_01729 NZ_CPUY01000007.1 Protein Homology CDS 124325 124756 . + 0 ID=cds-WP_223847765.1;Parent=gene-AD853_RS08540;Dbxref=GenBank:WP_223847765.1;Name=WP_223847765.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002362851.1;locus_tag=AD853_RS08540;product=general secretion pathway protein GspH;protein_id=WP_223847765.1;transl_table=11 NZ_CPUY01000007.1 RefSeq gene 124770 124877 . + . ID=gene-AD853_RS20485;Name=AD853_RS20485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS20485 NZ_CPUY01000007.1 Protein Homology CDS 124770 124877 . + 0 ID=cds-WP_157790413.1;Parent=gene-AD853_RS20485;Dbxref=GenBank:WP_157790413.1;Name=WP_157790413.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019575.6;locus_tag=AD853_RS20485;product=prepilin-type N-terminal cleavage/methylation domain-containing protein;protein_id=WP_157790413.1;transl_table=11 NZ_CPUY01000007.1 RefSeq gene 124899 125138 . + . ID=gene-AD853_RS08545;Name=AD853_RS08545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS08545;old_locus_tag=ERS008462_01730 NZ_CPUY01000007.1 Protein Homology CDS 124899 125138 . + 0 ID=cds-WP_038824413.1;Parent=gene-AD853_RS08545;Dbxref=GenBank:WP_038824413.1;Name=WP_038824413.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209861.1;locus_tag=AD853_RS08545;product=type II secretion system protein GspI;protein_id=WP_038824413.1;transl_table=11 NZ_CPUY01000007.1 RefSeq gene 125131 125727 . + . ID=gene-AD853_RS08550;Name=gspJ;gbkey=Gene;gene=gspJ;gene_biotype=protein_coding;locus_tag=AD853_RS08550;old_locus_tag=ERS008462_01731 NZ_CPUY01000007.1 Protein Homology CDS 125131 125727 . + 0 ID=cds-WP_033852475.1;Parent=gene-AD853_RS08550;Dbxref=GenBank:WP_033852475.1;Name=WP_033852475.1;Ontology_term=GO:0015628,GO:0015627;gbkey=CDS;gene=gspJ;go_component=type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014462283.1;locus_tag=AD853_RS08550;product=type II secretion system minor pseudopilin GspJ;protein_id=WP_033852475.1;transl_table=11 NZ_CPUY01000007.1 RefSeq gene 125736 126692 . + . ID=gene-AD853_RS08555;Name=AD853_RS08555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS08555;old_locus_tag=ERS008462_01732 NZ_CPUY01000007.1 Protein Homology CDS 125736 126692 . + 0 ID=cds-WP_038825739.1;Parent=gene-AD853_RS08555;Dbxref=GenBank:WP_038825739.1;Name=WP_038825739.1;Ontology_term=GO:0009306,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012303741.1;locus_tag=AD853_RS08555;product=type II secretion system minor pseudopilin;protein_id=WP_038825739.1;transl_table=11 NZ_CPUY01000007.1 RefSeq gene 126676 127866 . + . ID=gene-AD853_RS08560;Name=gspL;gbkey=Gene;gene=gspL;gene_biotype=protein_coding;locus_tag=AD853_RS08560;old_locus_tag=ERS008462_01733 NZ_CPUY01000007.1 Protein Homology CDS 126676 127866 . + 0 ID=cds-WP_038401074.1;Parent=gene-AD853_RS08560;Dbxref=GenBank:WP_038401074.1;Name=WP_038401074.1;Ontology_term=GO:0015628,GO:0009276,GO:0015627;gbkey=CDS;gene=gspL;go_component=Gram-negative-bacterium-type cell wall|0009276||IEA,type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012303742.1;locus_tag=AD853_RS08560;product=type II secretion system protein GspL;protein_id=WP_038401074.1;transl_table=11 NZ_CPUY01000007.1 RefSeq gene 127875 128318 . + . ID=gene-AD853_RS08565;Name=AD853_RS08565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS08565;old_locus_tag=ERS008462_01734 NZ_CPUY01000007.1 Protein Homology CDS 127875 128318 . + 0 ID=cds-WP_038824415.1;Parent=gene-AD853_RS08565;Dbxref=GenBank:WP_038824415.1;Name=WP_038824415.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002226092.1;locus_tag=AD853_RS08565;product=hypothetical protein;protein_id=WP_038824415.1;transl_table=11 NZ_CPUY01000007.1 RefSeq gene 128347 129186 . + . ID=gene-AD853_RS08570;Name=AD853_RS08570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS08570;old_locus_tag=ERS008462_01735 NZ_CPUY01000007.1 Protein Homology CDS 128347 129186 . + 0 ID=cds-WP_002209856.1;Parent=gene-AD853_RS08570;Dbxref=GenBank:WP_002209856.1;Name=WP_002209856.1;Ontology_term=GO:0004190,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=aspartic-type endopeptidase activity|0004190||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209856.1;locus_tag=AD853_RS08570;product=prepilin peptidase;protein_id=WP_002209856.1;transl_table=11 NZ_CPUY01000007.1 RefSeq gene 129170 129535 . - . ID=gene-AD853_RS08575;Name=gspS;gbkey=Gene;gene=gspS;gene_biotype=protein_coding;locus_tag=AD853_RS08575;old_locus_tag=ERS008462_01736 NZ_CPUY01000007.1 Protein Homology CDS 129170 129535 . - 0 ID=cds-WP_002230661.1;Parent=gene-AD853_RS08575;Dbxref=GenBank:WP_002230661.1;Name=WP_002230661.1;Ontology_term=GO:0006886;gbkey=CDS;gene=gspS;go_process=intracellular protein transport|0006886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012104723.1;locus_tag=AD853_RS08575;product=type II secretion system pilot lipoprotein GspS;protein_id=WP_002230661.1;transl_table=11 NZ_CPUY01000007.1 RefSeq gene 129821 130480 . + . ID=gene-AD853_RS08580;Name=AD853_RS08580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS08580;old_locus_tag=ERS008462_01737 NZ_CPUY01000007.1 Protein Homology CDS 129821 130480 . + 0 ID=cds-WP_038825488.1;Parent=gene-AD853_RS08580;Dbxref=GenBank:WP_038825488.1;Name=WP_038825488.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192884.1;locus_tag=AD853_RS08580;product=winged helix-turn-helix domain-containing protein;protein_id=WP_038825488.1;transl_table=11 NZ_CPUY01000007.1 RefSeq gene 130536 130937 . + . ID=gene-AD853_RS08585;Name=AD853_RS08585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS08585;old_locus_tag=ERS008462_01738 NZ_CPUY01000007.1 Protein Homology CDS 130536 130937 . + 0 ID=cds-WP_038824189.1;Parent=gene-AD853_RS08585;Dbxref=GenBank:WP_038824189.1;Name=WP_038824189.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002214100.1;locus_tag=AD853_RS08585;product=hypothetical protein;protein_id=WP_038824189.1;transl_table=11 NZ_CPUY01000007.1 RefSeq gene 131092 132792 . + . ID=gene-AD853_RS08590;Name=AD853_RS08590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS08590;old_locus_tag=ERS008462_01739 NZ_CPUY01000007.1 Protein Homology CDS 131092 132792 . + 0 ID=cds-WP_038824187.1;Parent=gene-AD853_RS08590;Dbxref=GenBank:WP_038824187.1;Name=WP_038824187.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011906285.1;locus_tag=AD853_RS08590;product=methyl-accepting chemotaxis protein;protein_id=WP_038824187.1;transl_table=11 NZ_CPUY01000007.1 RefSeq gene 132778 133413 . - . ID=gene-AD853_RS08595;Name=AD853_RS08595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS08595;old_locus_tag=ERS008462_01740 NZ_CPUY01000007.1 Protein Homology CDS 132778 133413 . - 0 ID=cds-WP_038824185.1;Parent=gene-AD853_RS08595;Dbxref=GenBank:WP_038824185.1;Name=WP_038824185.1;Ontology_term=GO:0016667;gbkey=CDS;go_function=oxidoreductase activity%2C acting on a sulfur group of donors|0016667||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192881.1;locus_tag=AD853_RS08595;product=DsbA family protein;protein_id=WP_038824185.1;transl_table=11 NZ_CPUY01000007.1 RefSeq gene 133526 134413 . - . ID=gene-AD853_RS08600;Name=AD853_RS08600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS08600;old_locus_tag=ERS008462_01741 NZ_CPUY01000007.1 Protein Homology CDS 133526 134413 . - 0 ID=cds-WP_012104727.1;Parent=gene-AD853_RS08600;Dbxref=GenBank:WP_012104727.1;Name=WP_012104727.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019082447.1;locus_tag=AD853_RS08600;product=MBL fold metallo-hydrolase;protein_id=WP_012104727.1;transl_table=11 NZ_CPUY01000007.1 RefSeq gene 134520 135428 . + . ID=gene-AD853_RS08605;Name=AD853_RS08605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS08605;old_locus_tag=ERS008462_01742 NZ_CPUY01000007.1 Protein Homology CDS 134520 135428 . + 0 ID=cds-WP_002209849.1;Parent=gene-AD853_RS08605;Dbxref=GenBank:WP_002209849.1;Name=WP_002209849.1;Ontology_term=GO:0006355,GO:0001216,GO:0032993;gbkey=CDS;go_component=protein-DNA complex|0032993||IEA;go_function=DNA-binding transcription activator activity|0001216||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209849.1;locus_tag=AD853_RS08605;product=LysR family transcriptional regulator;protein_id=WP_002209849.1;transl_table=11 NZ_CPUY01000007.1 RefSeq gene 135797 136930 . + . ID=gene-AD853_RS08610;Name=AD853_RS08610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS08610;old_locus_tag=ERS008462_01743 NZ_CPUY01000007.1 Protein Homology CDS 135797 136930 . + 0 ID=cds-WP_050124589.1;Parent=gene-AD853_RS08610;Dbxref=GenBank:WP_050124589.1;Name=WP_050124589.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209848.1;locus_tag=AD853_RS08610;product=MFS transporter;protein_id=WP_050124589.1;transl_table=11 NZ_CPUY01000007.1 RefSeq gene 136927 137868 . - . ID=gene-AD853_RS08615;Name=AD853_RS08615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS08615;old_locus_tag=ERS008462_01744 NZ_CPUY01000007.1 Protein Homology CDS 136927 137868 . - 0 ID=cds-WP_002209847.1;Parent=gene-AD853_RS08615;Dbxref=GenBank:WP_002209847.1;Name=WP_002209847.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012413873.1;locus_tag=AD853_RS08615;product=LysR family transcriptional regulator;protein_id=WP_002209847.1;transl_table=11 NZ_CPUY01000007.1 RefSeq gene 138083 139345 . + . ID=gene-AD853_RS08620;Name=lysA;gbkey=Gene;gene=lysA;gene_biotype=protein_coding;locus_tag=AD853_RS08620;old_locus_tag=ERS008462_01745 NZ_CPUY01000007.1 Protein Homology CDS 138083 139345 . + 0 ID=cds-WP_038824183.1;Parent=gene-AD853_RS08620;Dbxref=GenBank:WP_038824183.1;Name=WP_038824183.1;Ontology_term=GO:0009089,GO:0008836;gbkey=CDS;gene=lysA;go_function=diaminopimelate decarboxylase activity|0008836||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012303749.1;locus_tag=AD853_RS08620;product=diaminopimelate decarboxylase;protein_id=WP_038824183.1;transl_table=11 NZ_CPUY01000007.1 RefSeq gene 139342 140364 . - . ID=gene-AD853_RS08625;Name=galR;gbkey=Gene;gene=galR;gene_biotype=protein_coding;locus_tag=AD853_RS08625;old_locus_tag=ERS008462_01746 NZ_CPUY01000007.1 Protein Homology CDS 139342 140364 . - 0 ID=cds-WP_002209845.1;Parent=gene-AD853_RS08625;Dbxref=GenBank:WP_002209845.1;Name=WP_002209845.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=galR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209845.1;locus_tag=AD853_RS08625;product=HTH-type transcriptional regulator GalR;protein_id=WP_002209845.1;transl_table=11 NZ_CPUY01000007.1 RefSeq gene 140654 142915 . + . ID=gene-AD853_RS08630;Name=AD853_RS08630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS08630;old_locus_tag=ERS008462_01747 NZ_CPUY01000007.1 Protein Homology CDS 140654 142915 . + 0 ID=cds-WP_011192877.1;Parent=gene-AD853_RS08630;Dbxref=GenBank:WP_011192877.1;Name=WP_011192877.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002230169.1;locus_tag=AD853_RS08630;product=molybdopterin guanine dinucleotide-containing S/N-oxide reductase;protein_id=WP_011192877.1;transl_table=11 NZ_CPUY01000007.1 RefSeq gene 143363 145519 . + . ID=gene-AD853_RS08635;Name=aas;gbkey=Gene;gene=aas;gene_biotype=protein_coding;locus_tag=AD853_RS08635;old_locus_tag=ERS008462_01749 NZ_CPUY01000007.1 Protein Homology CDS 143363 145519 . + 0 ID=cds-WP_011192876.1;Parent=gene-AD853_RS08635;Dbxref=GenBank:WP_011192876.1;Name=WP_011192876.1;Ontology_term=GO:0006631,GO:0008654,GO:0008779,GO:0008922;gbkey=CDS;gene=aas;go_function=acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase activity|0008779||IEA,long-chain fatty acid [acyl-carrier-protein] ligase activity|0008922||IEA;go_process=fatty acid metabolic process|0006631||IEA,phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004702578.1;locus_tag=AD853_RS08635;product=bifunctional acyl-ACP--phospholipid O-acyltransferase/long-chain-fatty-acid--ACP ligase;protein_id=WP_011192876.1;transl_table=11 NZ_CPUY01000007.1 RefSeq gene 145516 146736 . + . ID=gene-AD853_RS08640;Name=lplT;gbkey=Gene;gene=lplT;gene_biotype=protein_coding;locus_tag=AD853_RS08640;old_locus_tag=ERS008462_01750 NZ_CPUY01000007.1 Protein Homology CDS 145516 146736 . + 0 ID=cds-WP_002209842.1;Parent=gene-AD853_RS08640;Dbxref=GenBank:WP_002209842.1;Name=WP_002209842.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=lplT;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002371852.1;locus_tag=AD853_RS08640;product=lysophospholipid transporter LplT;protein_id=WP_002209842.1;transl_table=11 NZ_CPUY01000007.1 RefSeq pseudogene 146792 146884 . - . ID=gene-AD853_RS22160;Name=AD853_RS22160;end_range=146884,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD853_RS22160;partial=true;pseudo=true;start_range=.,146792 NZ_CPUY01000007.1 Protein Homology CDS 146792 146884 . - 0 ID=cds-AD853_RS22160;Parent=gene-AD853_RS22160;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=146884,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414888.4;locus_tag=AD853_RS22160;partial=true;product=hypothetical protein;pseudo=true;start_range=.,146792;transl_table=11 NZ_CPUY01000007.1 RefSeq gene 147077 147328 . + . ID=gene-AD853_RS08650;Name=AD853_RS08650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS08650;old_locus_tag=ERS008462_01752 NZ_CPUY01000007.1 Protein Homology CDS 147077 147328 . + 0 ID=cds-WP_002209840.1;Parent=gene-AD853_RS08650;Dbxref=GenBank:WP_002209840.1;Name=WP_002209840.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209840.1;locus_tag=AD853_RS08650;product=hypothetical protein;protein_id=WP_002209840.1;transl_table=11 NZ_CPUY01000007.1 RefSeq gene 147520 148560 . - . ID=gene-AD853_RS08655;Name=AD853_RS08655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS08655;old_locus_tag=ERS008462_01753 NZ_CPUY01000007.1 Protein Homology CDS 147520 148560 . - 0 ID=cds-WP_002209839.1;Parent=gene-AD853_RS08655;Dbxref=GenBank:WP_002209839.1;Name=WP_002209839.1;Ontology_term=GO:0047834;gbkey=CDS;go_function=D-threo-aldose 1-dehydrogenase activity|0047834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005165364.1;locus_tag=AD853_RS08655;product=NADP(H)-dependent aldo-keto reductase;protein_id=WP_002209839.1;transl_table=11 NZ_CPUY01000007.1 RefSeq gene 148877 149563 . - . ID=gene-AD853_RS08660;Name=mutH;gbkey=Gene;gene=mutH;gene_biotype=protein_coding;locus_tag=AD853_RS08660;old_locus_tag=ERS008462_01754 NZ_CPUY01000007.1 Protein Homology CDS 148877 149563 . - 0 ID=cds-WP_002209838.1;Parent=gene-AD853_RS08660;Dbxref=GenBank:WP_002209838.1;Name=WP_002209838.1;Ontology_term=GO:0006304,GO:0004519;gbkey=CDS;gene=mutH;go_function=endonuclease activity|0004519||IEA;go_process=DNA modification|0006304||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005165371.1;locus_tag=AD853_RS08660;product=DNA mismatch repair endonuclease MutH;protein_id=WP_002209838.1;transl_table=11 NZ_CPUY01000007.1 RefSeq gene 150260 150787 . + . ID=gene-AD853_RS08675;Name=rppH;gbkey=Gene;gene=rppH;gene_biotype=protein_coding;locus_tag=AD853_RS08675;old_locus_tag=ERS008462_01755 NZ_CPUY01000007.1 Protein Homology CDS 150260 150787 . + 0 ID=cds-WP_002211381.1;Parent=gene-AD853_RS08675;Dbxref=GenBank:WP_002211381.1;Name=WP_002211381.1;Ontology_term=GO:0016787;gbkey=CDS;gene=rppH;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228602.1;locus_tag=AD853_RS08675;product=RNA pyrophosphohydrolase;protein_id=WP_002211381.1;transl_table=11 NZ_CPUY01000007.1 RefSeq gene 150800 153046 . + . ID=gene-AD853_RS08680;Name=ptsP;gbkey=Gene;gene=ptsP;gene_biotype=protein_coding;locus_tag=AD853_RS08680;old_locus_tag=ERS008462_01756 NZ_CPUY01000007.1 Protein Homology CDS 150800 153046 . + 0 ID=cds-WP_011192874.1;Parent=gene-AD853_RS08680;Dbxref=GenBank:WP_011192874.1;Name=WP_011192874.1;gbkey=CDS;gene=ptsP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019078930.1;locus_tag=AD853_RS08680;product=phosphoenolpyruvate--protein phosphotransferase;protein_id=WP_011192874.1;transl_table=11 NZ_CPUY01000007.1 RefSeq gene 153297 154169 . + . ID=gene-AD853_RS08685;Name=lgt;gbkey=Gene;gene=lgt;gene_biotype=protein_coding;locus_tag=AD853_RS08685;old_locus_tag=ERS008462_01757 NZ_CPUY01000007.1 Protein Homology CDS 153297 154169 . + 0 ID=cds-WP_002211383.1;Parent=gene-AD853_RS08685;Dbxref=GenBank:WP_002211383.1;Name=WP_002211383.1;Ontology_term=GO:0009249,GO:0008961,GO:0016020;gbkey=CDS;gene=lgt;go_component=membrane|0016020||IEA;go_function=phosphatidylglycerol-prolipoprotein diacylglyceryl transferase activity|0008961||IEA;go_process=protein lipoylation|0009249||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211383.1;locus_tag=AD853_RS08685;product=prolipoprotein diacylglyceryl transferase;protein_id=WP_002211383.1;transl_table=11 NZ_CPUY01000007.1 RefSeq gene 154176 154970 . + . ID=gene-AD853_RS08690;Name=thyA;gbkey=Gene;gene=thyA;gene_biotype=protein_coding;locus_tag=AD853_RS08690;old_locus_tag=ERS008462_01758 NZ_CPUY01000007.1 Protein Homology CDS 154176 154970 . + 0 ID=cds-WP_011192873.1;Parent=gene-AD853_RS08690;Dbxref=GenBank:WP_011192873.1;Name=WP_011192873.1;Ontology_term=GO:0006231,GO:0004799;gbkey=CDS;gene=thyA;go_function=thymidylate synthase activity|0004799||IEA;go_process=dTMP biosynthetic process|0006231||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123418.1;locus_tag=AD853_RS08690;product=thymidylate synthase;protein_id=WP_011192873.1;transl_table=11 NZ_CPUY01000007.1 RefSeq gene 155206 155775 . + . ID=gene-AD853_RS08700;Name=AD853_RS08700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS08700;old_locus_tag=ERS008462_01760 NZ_CPUY01000007.1 Protein Homology CDS 155206 155775 . + 0 ID=cds-WP_002228638.1;Parent=gene-AD853_RS08700;Dbxref=GenBank:WP_002228638.1;Name=WP_002228638.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002228638.1;locus_tag=AD853_RS08700;product=prepilin peptidase-dependent protein;protein_id=WP_002228638.1;transl_table=11 NZ_CPUY01000007.1 RefSeq gene 155766 156374 . + . ID=gene-AD853_RS08705;Name=AD853_RS08705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS08705;old_locus_tag=ERS008462_01761 NZ_CPUY01000007.1 Protein Homology CDS 155766 156374 . + 0 ID=cds-WP_002211630.1;Parent=gene-AD853_RS08705;Dbxref=GenBank:WP_002211630.1;Name=WP_002211630.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211630.1;locus_tag=AD853_RS08705;product=prepilin peptidase-dependent protein;protein_id=WP_002211630.1;transl_table=11 NZ_CPUY01000007.1 RefSeq gene 156371 156841 . + . ID=gene-AD853_RS08710;Name=AD853_RS08710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS08710;old_locus_tag=ERS008462_01762 NZ_CPUY01000007.1 Protein Homology CDS 156371 156841 . + 0 ID=cds-WP_002211629.1;Parent=gene-AD853_RS08710;Dbxref=GenBank:WP_002211629.1;Name=WP_002211629.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012104730.1;locus_tag=AD853_RS08710;product=YgdB family protein;protein_id=WP_002211629.1;transl_table=11 NZ_CPUY01000007.1 RefSeq gene 156829 157239 . + . ID=gene-AD853_RS08715;Name=AD853_RS08715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS08715;old_locus_tag=ERS008462_01763 NZ_CPUY01000007.1 Protein Homology CDS 156829 157239 . + 0 ID=cds-WP_012104731.1;Parent=gene-AD853_RS08715;Dbxref=GenBank:WP_012104731.1;Name=WP_012104731.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002228047.1;locus_tag=AD853_RS08715;product=type IV pilus modification PilV family protein;protein_id=WP_012104731.1;transl_table=11 NZ_CPUY01000007.1 RefSeq gene 157374 160745 . + . ID=gene-AD853_RS08720;Name=recC;gbkey=Gene;gene=recC;gene_biotype=protein_coding;locus_tag=AD853_RS08720;old_locus_tag=ERS008462_01764 NZ_CPUY01000007.1 Protein Homology CDS 157374 160745 . + 0 ID=cds-WP_011192871.1;Parent=gene-AD853_RS08720;Dbxref=GenBank:WP_011192871.1;Name=WP_011192871.1;Ontology_term=GO:0008854,GO:0009338;gbkey=CDS;gene=recC;go_component=exodeoxyribonuclease V complex|0009338||IEA;go_function=exodeoxyribonuclease V activity|0008854||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002220072.1;locus_tag=AD853_RS08720;product=exodeoxyribonuclease V subunit gamma;protein_id=WP_011192871.1;transl_table=11 NZ_CPUY01000007.1 RefSeq gene 160827 163721 . + . ID=gene-AD853_RS08725;Name=ptrA;gbkey=Gene;gene=ptrA;gene_biotype=protein_coding;locus_tag=AD853_RS08725;old_locus_tag=ERS008462_01765 NZ_CPUY01000007.1 Protein Homology CDS 160827 163721 . + 0 ID=cds-WP_038824180.1;Parent=gene-AD853_RS08725;Dbxref=GenBank:WP_038824180.1;Name=WP_038824180.1;Ontology_term=GO:0006508,GO:0004222,GO:0046872;gbkey=CDS;gene=ptrA;go_function=metalloendopeptidase activity|0004222||IEA,metal ion binding|0046872||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012303752.1;locus_tag=AD853_RS08725;product=pitrilysin;protein_id=WP_038824180.1;transl_table=11 NZ_CPUY01000007.1 RefSeq gene 163718 167380 . + . ID=gene-AD853_RS08730;Name=recB;gbkey=Gene;gene=recB;gene_biotype=protein_coding;locus_tag=AD853_RS08730;old_locus_tag=ERS008462_01766 NZ_CPUY01000007.1 Protein Homology CDS 163718 167380 . + 0 ID=cds-WP_012104732.1;Parent=gene-AD853_RS08730;Dbxref=GenBank:WP_012104732.1;Name=WP_012104732.1;Ontology_term=GO:0006281,GO:0003677,GO:0003678,GO:0005524,GO:0008854;gbkey=CDS;gene=recB;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA,exodeoxyribonuclease V activity|0008854||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012104732.1;locus_tag=AD853_RS08730;product=exodeoxyribonuclease V subunit beta;protein_id=WP_012104732.1;transl_table=11 NZ_CPUY01000007.1 RefSeq gene 167377 169335 . + . ID=gene-AD853_RS08735;Name=recD;gbkey=Gene;gene=recD;gene_biotype=protein_coding;locus_tag=AD853_RS08735;old_locus_tag=ERS008462_01767 NZ_CPUY01000007.1 Protein Homology CDS 167377 169335 . + 0 ID=cds-WP_050124590.1;Parent=gene-AD853_RS08735;Dbxref=GenBank:WP_050124590.1;Name=WP_050124590.1;Ontology_term=GO:0006302,GO:0006310,GO:0004386,GO:0008854,GO:0009338;gbkey=CDS;gene=recD;go_component=exodeoxyribonuclease V complex|0009338||IEA;go_function=helicase activity|0004386||IEA,exodeoxyribonuclease V activity|0008854||IEA;go_process=double-strand break repair|0006302||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192870.1;locus_tag=AD853_RS08735;product=exodeoxyribonuclease V subunit alpha;protein_id=WP_050124590.1;transl_table=11 NZ_CPUY01000007.1 RefSeq gene 169477 170802 . - . ID=gene-AD853_RS08740;Name=argA;gbkey=Gene;gene=argA;gene_biotype=protein_coding;locus_tag=AD853_RS08740;old_locus_tag=ERS008462_01768 NZ_CPUY01000007.1 Protein Homology CDS 169477 170802 . - 0 ID=cds-WP_038824175.1;Parent=gene-AD853_RS08740;Dbxref=GenBank:WP_038824175.1;Name=WP_038824175.1;Ontology_term=GO:0006526,GO:0004042;gbkey=CDS;gene=argA;go_function=L-glutamate N-acetyltransferase activity|0004042||IEA;go_process=L-arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006318963.1;locus_tag=AD853_RS08740;product=amino-acid N-acetyltransferase;protein_id=WP_038824175.1;transl_table=11 NZ_CPUY01000007.1 RefSeq gene 171036 172286 . + . ID=gene-AD853_RS08745;Name=amiC;gbkey=Gene;gene=amiC;gene_biotype=protein_coding;locus_tag=AD853_RS08745;old_locus_tag=ERS008462_01769 NZ_CPUY01000007.1 Protein Homology CDS 171036 172286 . + 0 ID=cds-WP_038824174.1;Parent=gene-AD853_RS08745;Dbxref=GenBank:WP_038824174.1;Name=WP_038824174.1;Ontology_term=GO:0009253,GO:0008745;gbkey=CDS;gene=amiC;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013649373.1;locus_tag=AD853_RS08745;product=N-acetylmuramoyl-L-alanine amidase AmiC;protein_id=WP_038824174.1;transl_table=11 NZ_CPUY01000007.1 RefSeq gene 172516 172592 . - . ID=gene-AD853_RS08750;Name=AD853_RS08750;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD853_RS08750;old_locus_tag=ERS008462_01770 NZ_CPUY01000007.1 tRNAscan-SE tRNA 172516 172592 . - . ID=rna-AD853_RS08750;Parent=gene-AD853_RS08750;anticodon=(pos:complement(172556..172558));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD853_RS08750;product=tRNA-Met NZ_CPUY01000007.1 tRNAscan-SE exon 172516 172592 . - . ID=exon-AD853_RS08750-1;Parent=rna-AD853_RS08750;anticodon=(pos:complement(172556..172558));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD853_RS08750;product=tRNA-Met NZ_CPUY01000007.1 RefSeq gene 172738 172814 . - . ID=gene-AD853_RS08755;Name=AD853_RS08755;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD853_RS08755;old_locus_tag=ERS008462_01771 NZ_CPUY01000007.1 tRNAscan-SE tRNA 172738 172814 . - . ID=rna-AD853_RS08755;Parent=gene-AD853_RS08755;anticodon=(pos:complement(172778..172780));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD853_RS08755;product=tRNA-Met NZ_CPUY01000007.1 tRNAscan-SE exon 172738 172814 . - . ID=exon-AD853_RS08755-1;Parent=rna-AD853_RS08755;anticodon=(pos:complement(172778..172780));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD853_RS08755;product=tRNA-Met NZ_CPUY01000007.1 RefSeq gene 173030 174202 . + . ID=gene-AD853_RS08760;Name=mltA;gbkey=Gene;gene=mltA;gene_biotype=protein_coding;locus_tag=AD853_RS08760;old_locus_tag=ERS008462_01772 NZ_CPUY01000007.1 Protein Homology CDS 173030 174202 . + 0 ID=cds-WP_002228046.1;Parent=gene-AD853_RS08760;Dbxref=GenBank:WP_002228046.1;Name=WP_002228046.1;Ontology_term=GO:0009254,GO:0004553,GO:0019867;gbkey=CDS;gene=mltA;go_component=outer membrane|0019867||IEA;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=peptidoglycan turnover|0009254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002228046.1;locus_tag=AD853_RS08760;product=murein transglycosylase A;protein_id=WP_002228046.1;transl_table=11 NZ_CPUY01000007.1 RefSeq gene 174345 175172 . + . ID=gene-AD853_RS08765;Name=tcdA;gbkey=Gene;gene=tcdA;gene_biotype=protein_coding;locus_tag=AD853_RS08765;old_locus_tag=ERS008462_01773 NZ_CPUY01000007.1 Protein Homology CDS 174345 175172 . + 0 ID=cds-WP_002212114.1;Parent=gene-AD853_RS08765;Dbxref=GenBank:WP_002212114.1;Name=WP_002212114.1;Ontology_term=GO:0008641;gbkey=CDS;gene=tcdA;go_function=ubiquitin-like modifier activating enzyme activity|0008641||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012104734.1;locus_tag=AD853_RS08765;product=tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA;protein_id=WP_002212114.1;transl_table=11 NZ_CPUY01000007.1 RefSeq gene 175222 175665 . - . ID=gene-AD853_RS08770;Name=csdE;gbkey=Gene;gene=csdE;gene_biotype=protein_coding;locus_tag=AD853_RS08770;old_locus_tag=ERS008462_01774 NZ_CPUY01000007.1 Protein Homology CDS 175222 175665 . - 0 ID=cds-WP_038824697.1;Parent=gene-AD853_RS08770;Dbxref=GenBank:WP_038824697.1;Name=WP_038824697.1;Ontology_term=GO:0016226,GO:0031071;gbkey=CDS;gene=csdE;go_function=cysteine desulfurase activity|0031071||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212115.1;locus_tag=AD853_RS08770;product=cysteine desulfurase sulfur acceptor subunit CsdE;protein_id=WP_038824697.1;transl_table=11 NZ_CPUY01000007.1 RefSeq gene 175798 177003 . - . ID=gene-AD853_RS08775;Name=csdA;gbkey=Gene;gene=csdA;gene_biotype=protein_coding;locus_tag=AD853_RS08775;old_locus_tag=ERS008462_01775 NZ_CPUY01000007.1 Protein Homology CDS 175798 177003 . - 0 ID=cds-WP_012104737.1;Parent=gene-AD853_RS08775;Dbxref=GenBank:WP_012104737.1;Name=WP_012104737.1;Ontology_term=GO:0016226,GO:0031071;gbkey=CDS;gene=csdA;go_function=cysteine desulfurase activity|0031071||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212116.1;locus_tag=AD853_RS08775;product=cysteine desulfurase CsdA;protein_id=WP_012104737.1;transl_table=11 NZ_CPUY01000007.1 RefSeq gene 177095 177214 . + . ID=gene-AD853_RS20490;Name=AD853_RS20490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS20490;old_locus_tag=ERS008462_01776 NZ_CPUY01000007.1 Protein Homology CDS 177095 177214 . + 0 ID=cds-WP_002231328.1;Parent=gene-AD853_RS20490;Dbxref=GenBank:WP_002231328.1;Name=WP_002231328.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002231328.1;locus_tag=AD853_RS20490;product=DUF903 domain-containing protein;protein_id=WP_002231328.1;transl_table=11 NZ_CPUY01000007.1 RefSeq gene 177678 178595 . + . ID=gene-AD853_RS08780;Name=AD853_RS08780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS08780;old_locus_tag=ERS008462_01778 NZ_CPUY01000007.1 Protein Homology CDS 177678 178595 . + 0 ID=cds-WP_002212117.1;Parent=gene-AD853_RS08780;Dbxref=GenBank:WP_002212117.1;Name=WP_002212117.1;Ontology_term=GO:0006351,GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA-templated transcription|0006351||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004391719.1;locus_tag=AD853_RS08780;product=transcriptional regulator GcvA;protein_id=WP_002212117.1;transl_table=11 NZ_CPUY01000007.1 RefSeq gene 178761 179156 . + . ID=gene-AD853_RS08785;Name=AD853_RS08785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS08785;old_locus_tag=ERS008462_01779 NZ_CPUY01000007.1 Protein Homology CDS 178761 179156 . + 0 ID=cds-WP_002212118.1;Parent=gene-AD853_RS08785;Dbxref=GenBank:WP_002212118.1;Name=WP_002212118.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212118.1;locus_tag=AD853_RS08785;product=DUF423 domain-containing protein;protein_id=WP_002212118.1;transl_table=11 NZ_CPUY01000007.1 RefSeq gene 179149 180255 . + . ID=gene-AD853_RS08790;Name=rlmM;gbkey=Gene;gene=rlmM;gene_biotype=protein_coding;locus_tag=AD853_RS08790;old_locus_tag=ERS008462_01780 NZ_CPUY01000007.1 Protein Homology CDS 179149 180255 . + 0 ID=cds-WP_002212119.1;Parent=gene-AD853_RS08790;Dbxref=GenBank:WP_002212119.1;Name=WP_002212119.1;Ontology_term=GO:0008168;gbkey=CDS;gene=rlmM;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004706716.1;locus_tag=AD853_RS08790;product=23S rRNA (cytidine(2498)-2'-O)-methyltransferase RlmM;protein_id=WP_002212119.1;transl_table=11 NZ_CPUY01000007.1 RefSeq gene 180503 181258 . - . ID=gene-AD853_RS08795;Name=xni;gbkey=Gene;gene=xni;gene_biotype=protein_coding;locus_tag=AD853_RS08795;old_locus_tag=ERS008462_01781 NZ_CPUY01000007.1 Protein Homology CDS 180503 181258 . - 0 ID=cds-WP_011192868.1;Parent=gene-AD853_RS08795;Dbxref=GenBank:WP_011192868.1;Name=WP_011192868.1;Ontology_term=GO:0033567,GO:0003677,GO:0017108;gbkey=CDS;gene=xni;go_function=DNA binding|0003677||IEA,5'-flap endonuclease activity|0017108||IEA;go_process=DNA replication%2C Okazaki fragment processing|0033567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192868.1;locus_tag=AD853_RS08795;product=flap endonuclease Xni;protein_id=WP_011192868.1;transl_table=11 NZ_CPUY01000007.1 RefSeq gene 181518 182882 . - . ID=gene-AD853_RS08800;Name=ppnN;gbkey=Gene;gene=ppnN;gene_biotype=protein_coding;locus_tag=AD853_RS08800;old_locus_tag=ERS008462_01782 NZ_CPUY01000007.1 Protein Homology CDS 181518 182882 . - 0 ID=cds-WP_002212121.1;Parent=gene-AD853_RS08800;Dbxref=GenBank:WP_002212121.1;Name=WP_002212121.1;gbkey=CDS;gene=ppnN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461889.1;locus_tag=AD853_RS08800;product=nucleotide 5'-monophosphate nucleosidase PpnN;protein_id=WP_002212121.1;transl_table=11 NZ_CPUY01000007.1 RefSeq gene 183035 183880 . - . ID=gene-AD853_RS08805;Name=queF;gbkey=Gene;gene=queF;gene_biotype=protein_coding;locus_tag=AD853_RS08805;old_locus_tag=ERS008462_01783 NZ_CPUY01000007.1 Protein Homology CDS 183035 183880 . - 0 ID=cds-WP_038823680.1;Parent=gene-AD853_RS08805;Dbxref=GenBank:WP_038823680.1;Name=WP_038823680.1;Note=Catalyzes the NADPH-dependent reduction of 7-cyano-7-deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) in queuosine biosynthesis;Ontology_term=GO:0008616,GO:0033739,GO:0043867;gbkey=CDS;gene=queF;go_function=preQ1 synthase activity|0033739||IEA,7-cyano-7-deazaguanine tRNA-ribosyltransferase activity|0043867||IEA;go_process=tRNA queuosine(34) biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013649376.1;locus_tag=AD853_RS08805;product=NADPH-dependent 7-cyano-7-deazaguanine reductase QueF;protein_id=WP_038823680.1;transl_table=11 NZ_CPUY01000007.1 RefSeq gene 184012 184563 . + . ID=gene-AD853_RS08810;Name=syd;gbkey=Gene;gene=syd;gene_biotype=protein_coding;locus_tag=AD853_RS08810;old_locus_tag=ERS008462_01784 NZ_CPUY01000007.1 Protein Homology CDS 184012 184563 . + 0 ID=cds-WP_012104738.1;Parent=gene-AD853_RS08810;Dbxref=GenBank:WP_012104738.1;Name=WP_012104738.1;Ontology_term=GO:0009898;gbkey=CDS;gene=syd;go_component=cytoplasmic side of plasma membrane|0009898||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004706711.1;locus_tag=AD853_RS08810;product=SecY-interacting protein;protein_id=WP_012104738.1;transl_table=11 NZ_CPUY01000007.1 RefSeq gene 185000 185194 . - . ID=gene-AD853_RS21545;Name=AD853_RS21545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS21545 NZ_CPUY01000007.1 GeneMarkS-2+ CDS 185000 185194 . - 0 ID=cds-WP_146135043.1;Parent=gene-AD853_RS21545;Dbxref=GenBank:WP_146135043.1;Name=WP_146135043.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AD853_RS21545;product=hypothetical protein;protein_id=WP_146135043.1;transl_table=11 NZ_CPUY01000007.1 RefSeq gene 185271 185603 . + . ID=gene-AD853_RS08815;Name=AD853_RS08815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS08815;old_locus_tag=ERS008462_01786 NZ_CPUY01000007.1 Protein Homology CDS 185271 185603 . + 0 ID=cds-WP_002212124.1;Parent=gene-AD853_RS08815;Dbxref=GenBank:WP_002212124.1;Name=WP_002212124.1;Ontology_term=GO:0044010;gbkey=CDS;go_process=single-species biofilm formation|0044010||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212124.1;locus_tag=AD853_RS08815;product=YqcC family protein;protein_id=WP_002212124.1;transl_table=11 NZ_CPUY01000007.1 RefSeq gene 185603 186376 . + . ID=gene-AD853_RS08820;Name=truC;gbkey=Gene;gene=truC;gene_biotype=protein_coding;locus_tag=AD853_RS08820;old_locus_tag=ERS008462_01787 NZ_CPUY01000007.1 Protein Homology CDS 185603 186376 . + 0 ID=cds-WP_002212125.1;Parent=gene-AD853_RS08820;Dbxref=GenBank:WP_002212125.1;Name=WP_002212125.1;Ontology_term=GO:0001522,GO:0009982;gbkey=CDS;gene=truC;go_function=pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212125.1;locus_tag=AD853_RS08820;product=tRNA pseudouridine(65) synthase TruC;protein_id=WP_002212125.1;transl_table=11 NZ_CPUY01000007.1 RefSeq gene 186404 186853 . + . ID=gene-AD853_RS08825;Name=AD853_RS08825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS08825;old_locus_tag=ERS008462_01788 NZ_CPUY01000007.1 Protein Homology CDS 186404 186853 . + 0 ID=cds-WP_002212126.1;Parent=gene-AD853_RS08825;Dbxref=GenBank:WP_002212126.1;Name=WP_002212126.1;Ontology_term=GO:0010181;gbkey=CDS;go_function=FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013649378.1;locus_tag=AD853_RS08825;product=flavodoxin;protein_id=WP_002212126.1;transl_table=11 NZ_CPUY01000007.1 RefSeq gene 186943 187332 . - . ID=gene-AD853_RS08830;Name=AD853_RS08830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS08830;old_locus_tag=ERS008462_01789 NZ_CPUY01000007.1 Protein Homology CDS 186943 187332 . - 0 ID=cds-WP_002212127.1;Parent=gene-AD853_RS08830;Dbxref=GenBank:WP_002212127.1;Name=WP_002212127.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006318690.1;locus_tag=AD853_RS08830;product=DUF3461 family protein;protein_id=WP_002212127.1;transl_table=11 NZ_CPUY01000007.1 RefSeq gene 187456 188280 . - . ID=gene-AD853_RS08835;Name=dapD;gbkey=Gene;gene=dapD;gene_biotype=protein_coding;locus_tag=AD853_RS08835;old_locus_tag=ERS008462_01790 NZ_CPUY01000007.1 Protein Homology CDS 187456 188280 . - 0 ID=cds-WP_002212128.1;Parent=gene-AD853_RS08835;Dbxref=GenBank:WP_002212128.1;Name=WP_002212128.1;Ontology_term=GO:0009089,GO:0008666;gbkey=CDS;gene=dapD;go_function=2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxylate N-succinyltransferase activity|0008666||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132123.1;locus_tag=AD853_RS08835;product=2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxylate N-succinyltransferase;protein_id=WP_002212128.1;transl_table=11 NZ_CPUY01000007.1 RefSeq gene 188455 191136 . - . ID=gene-AD853_RS08840;Name=glnD;gbkey=Gene;gene=glnD;gene_biotype=protein_coding;locus_tag=AD853_RS08840;old_locus_tag=ERS008462_01791 NZ_CPUY01000007.1 Protein Homology CDS 188455 191136 . - 0 ID=cds-WP_002212129.1;Parent=gene-AD853_RS08840;Dbxref=GenBank:WP_002212129.1;Name=WP_002212129.1;Ontology_term=GO:0008152,GO:0016779;gbkey=CDS;gene=glnD;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192863.1;locus_tag=AD853_RS08840;product=bifunctional uridylyltransferase/uridylyl-removing protein GlnD;protein_id=WP_002212129.1;transl_table=11 NZ_CPUY01000007.1 RefSeq gene 191196 191987 . - . ID=gene-AD853_RS08845;Name=map;gbkey=Gene;gene=map;gene_biotype=protein_coding;locus_tag=AD853_RS08845;old_locus_tag=ERS008462_01792 NZ_CPUY01000007.1 Protein Homology CDS 191196 191987 . - 0 ID=cds-WP_012104740.1;Parent=gene-AD853_RS08845;Dbxref=GenBank:WP_012104740.1;Name=WP_012104740.1;Ontology_term=GO:0006508,GO:0070006;gbkey=CDS;gene=map;go_function=metalloaminopeptidase activity|0070006||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004704362.1;locus_tag=AD853_RS08845;product=type I methionyl aminopeptidase;protein_id=WP_012104740.1;transl_table=11 NZ_CPUY01000007.1 RefSeq gene 192422 193147 . + . ID=gene-AD853_RS08850;Name=rpsB;gbkey=Gene;gene=rpsB;gene_biotype=protein_coding;locus_tag=AD853_RS08850;old_locus_tag=ERS008462_01794 NZ_CPUY01000007.1 Protein Homology CDS 192422 193147 . + 0 ID=cds-WP_002221800.1;Parent=gene-AD853_RS08850;Dbxref=GenBank:WP_002221800.1;Name=WP_002221800.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsB;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132117.1;locus_tag=AD853_RS08850;product=30S ribosomal protein S2;protein_id=WP_002221800.1;transl_table=11 NZ_CPUY01000007.1 RefSeq gene 193275 194132 . + . ID=gene-AD853_RS08855;Name=tsf;gbkey=Gene;gene=tsf;gene_biotype=protein_coding;locus_tag=AD853_RS08855;old_locus_tag=ERS008462_01795 NZ_CPUY01000007.1 Protein Homology CDS 193275 194132 . + 0 ID=cds-WP_002212132.1;Parent=gene-AD853_RS08855;Dbxref=GenBank:WP_002212132.1;Name=WP_002212132.1;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=tsf;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005276101.1;locus_tag=AD853_RS08855;product=translation elongation factor Ts;protein_id=WP_002212132.1;transl_table=11 NZ_CPUY01000007.1 RefSeq gene 194341 195066 . + . ID=gene-AD853_RS08860;Name=pyrH;gbkey=Gene;gene=pyrH;gene_biotype=protein_coding;locus_tag=AD853_RS08860;old_locus_tag=ERS008462_01796 NZ_CPUY01000007.1 Protein Homology CDS 194341 195066 . + 0 ID=cds-WP_002212133.1;Parent=gene-AD853_RS08860;Dbxref=GenBank:WP_002212133.1;Name=WP_002212133.1;Ontology_term=GO:0006221,GO:0015949,GO:0033862,GO:0005737;gbkey=CDS;gene=pyrH;go_component=cytoplasm|0005737||IEA;go_function=UMP kinase activity|0033862||IEA;go_process=pyrimidine nucleotide biosynthetic process|0006221||IEA,nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212133.1;locus_tag=AD853_RS08860;product=UMP kinase;protein_id=WP_002212133.1;transl_table=11 NZ_CPUY01000007.1 RefSeq gene 195202 195759 . + . ID=gene-AD853_RS08865;Name=frr;gbkey=Gene;gene=frr;gene_biotype=protein_coding;locus_tag=AD853_RS08865;old_locus_tag=ERS008462_01797 NZ_CPUY01000007.1 Protein Homology CDS 195202 195759 . + 0 ID=cds-WP_002212134.1;Parent=gene-AD853_RS08865;Dbxref=GenBank:WP_002212134.1;Name=WP_002212134.1;Ontology_term=GO:0006412,GO:0008135;gbkey=CDS;gene=frr;go_function=translation factor activity%2C RNA binding|0008135||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012440641.1;locus_tag=AD853_RS08865;product=ribosome recycling factor;protein_id=WP_002212134.1;transl_table=11 NZ_CPUY01000007.1 RefSeq gene 195973 197169 . + . ID=gene-AD853_RS08870;Name=ispC;gbkey=Gene;gene=ispC;gene_biotype=protein_coding;locus_tag=AD853_RS08870;old_locus_tag=ERS008462_01798 NZ_CPUY01000007.1 Protein Homology CDS 195973 197169 . + 0 ID=cds-WP_002212135.1;Parent=gene-AD853_RS08870;Dbxref=GenBank:WP_002212135.1;Name=WP_002212135.1;Ontology_term=GO:0008299,GO:0005515,GO:0030604,GO:0046872,GO:0070402;gbkey=CDS;gene=ispC;go_function=protein binding|0005515||IEA,1-deoxy-D-xylulose-5-phosphate reductoisomerase activity|0030604||IEA,metal ion binding|0046872||IEA,NADPH binding|0070402||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019082472.1;locus_tag=AD853_RS08870;product=1-deoxy-D-xylulose-5-phosphate reductoisomerase;protein_id=WP_002212135.1;transl_table=11 ##sequence-region NZ_CPUY01000008.1 1 191297 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=633 NZ_CPUY01000008.1 RefSeq region 1 191297 . + . ID=NZ_CPUY01000008.1:1..191297;Dbxref=taxon:633;collection-date=1900/2008;country=South Africa;gbkey=Src;genome=genomic;isolation-source=not known;mol_type=genomic DNA;nat-host=pig;serovar=O:3;strain=IP32544 NZ_CPUY01000008.1 RefSeq gene 94 1485 . - . ID=gene-AD853_RS08875;Name=AD853_RS08875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS08875;old_locus_tag=ERS008462_01800 NZ_CPUY01000008.1 Protein Homology CDS 94 1485 . - 0 ID=cds-WP_038825250.1;Parent=gene-AD853_RS08875;Dbxref=GenBank:WP_038825250.1;Name=WP_038825250.1;Ontology_term=GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304242.1;locus_tag=AD853_RS08875;product=APC family permease;protein_id=WP_038825250.1;transl_table=11 NZ_CPUY01000008.1 RefSeq gene 1475 1690 . - . ID=gene-AD853_RS22490;Name=AD853_RS22490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS22490;old_locus_tag=ERS008462_01801 NZ_CPUY01000008.1 Protein Homology CDS 1475 1690 . - 0 ID=cds-WP_002216313.1;Parent=gene-AD853_RS22490;Dbxref=GenBank:WP_002216313.1;Name=WP_002216313.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002216313.1;locus_tag=AD853_RS22490;product=hypothetical protein;protein_id=WP_002216313.1;transl_table=11 NZ_CPUY01000008.1 RefSeq gene 1944 3035 . - . ID=gene-AD853_RS08885;Name=AD853_RS08885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS08885;old_locus_tag=ERS008462_01803 NZ_CPUY01000008.1 Protein Homology CDS 1944 3035 . - 0 ID=cds-WP_038399972.1;Parent=gene-AD853_RS08885;Dbxref=GenBank:WP_038399972.1;Name=WP_038399972.1;Ontology_term=GO:0016491,GO:0046872;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002216312.1;locus_tag=AD853_RS08885;product=oxidoreductase;protein_id=WP_038399972.1;transl_table=11 NZ_CPUY01000008.1 RefSeq gene 3321 4877 . + . ID=gene-AD853_RS22165;Name=AD853_RS22165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS22165;old_locus_tag=ERS008462_01804 NZ_CPUY01000008.1 Protein Homology CDS 3321 4877 . + 0 ID=cds-WP_011192125.1;Parent=gene-AD853_RS22165;Dbxref=GenBank:WP_011192125.1;Name=WP_011192125.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004699385.1;locus_tag=AD853_RS22165;product=sugar ABC transporter ATP-binding protein;protein_id=WP_011192125.1;transl_table=11 NZ_CPUY01000008.1 RefSeq gene 4874 5869 . + . ID=gene-AD853_RS08895;Name=AD853_RS08895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS08895;old_locus_tag=ERS008462_01805 NZ_CPUY01000008.1 Protein Homology CDS 4874 5869 . + 0 ID=cds-WP_011192124.1;Parent=gene-AD853_RS08895;Dbxref=GenBank:WP_011192124.1;Name=WP_011192124.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012145935.1;locus_tag=AD853_RS08895;product=ABC transporter permease;protein_id=WP_011192124.1;transl_table=11 NZ_CPUY01000008.1 RefSeq gene 6147 6260 . + . ID=gene-AD853_RS22630;Name=AD853_RS22630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS22630 NZ_CPUY01000008.1 Protein Homology CDS 6147 6260 . + 0 ID=cds-WP_190947800.1;Parent=gene-AD853_RS22630;Dbxref=GenBank:WP_190947800.1;Name=WP_190947800.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002264692.1;locus_tag=AD853_RS22630;product=gluconate 5-dehydrogenase;protein_id=WP_190947800.1;transl_table=11 NZ_CPUY01000008.1 RefSeq gene 6271 6561 . + . ID=gene-AD853_RS21815;Name=AD853_RS21815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS21815 NZ_CPUY01000008.1 Protein Homology CDS 6271 6561 . + 0 ID=cds-WP_157131899.1;Parent=gene-AD853_RS21815;Dbxref=GenBank:WP_157131899.1;Name=WP_157131899.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF028005.6;locus_tag=AD853_RS21815;product=T6SS amidase immunity protein Tai4 family protein;protein_id=WP_157131899.1;transl_table=11 NZ_CPUY01000008.1 RefSeq gene 6978 7634 . + . ID=gene-AD853_RS08910;Name=AD853_RS08910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS08910;old_locus_tag=ERS008462_01807 NZ_CPUY01000008.1 Protein Homology CDS 6978 7634 . + 0 ID=cds-WP_011192123.1;Parent=gene-AD853_RS08910;Dbxref=GenBank:WP_011192123.1;Name=WP_011192123.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192123.1;locus_tag=AD853_RS08910;product=hypothetical protein;protein_id=WP_011192123.1;transl_table=11 NZ_CPUY01000008.1 RefSeq gene 7941 8768 . - . ID=gene-AD853_RS08915;Name=AD853_RS08915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS08915;old_locus_tag=ERS008462_01808 NZ_CPUY01000008.1 Protein Homology CDS 7941 8768 . - 0 ID=cds-WP_038824673.1;Parent=gene-AD853_RS08915;Dbxref=GenBank:WP_038824673.1;Name=WP_038824673.1;Ontology_term=GO:0016491,GO:0051287;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211898.1;locus_tag=AD853_RS08915;product=SDR family oxidoreductase;protein_id=WP_038824673.1;transl_table=11 NZ_CPUY01000008.1 RefSeq gene 9144 9191 . + . ID=gene-AD853_RS21550;Name=hisL;gbkey=Gene;gene=hisL;gene_biotype=protein_coding;locus_tag=AD853_RS21550 NZ_CPUY01000008.1 Protein Homology CDS 9144 9191 . + 0 ID=cds-WP_002231208.1;Parent=gene-AD853_RS21550;Dbxref=GenBank:WP_002231208.1;Name=WP_002231208.1;Ontology_term=GO:0000105;gbkey=CDS;gene=hisL;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416522.1;locus_tag=AD853_RS21550;product=his operon leader peptide;protein_id=WP_002231208.1;transl_table=11 NZ_CPUY01000008.1 cmsearch sequence_feature 9167 9296 . + . ID=id-NZ_CPUY01000008.1:9167..9296;Dbxref=RFAM:RF00514;Note=His leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.5 NZ_CPUY01000008.1 RefSeq gene 9482 10381 . + . ID=gene-AD853_RS08920;Name=hisG;gbkey=Gene;gene=hisG;gene_biotype=protein_coding;locus_tag=AD853_RS08920;old_locus_tag=ERS008462_01810 NZ_CPUY01000008.1 Protein Homology CDS 9482 10381 . + 0 ID=cds-WP_002211896.1;Parent=gene-AD853_RS08920;Dbxref=GenBank:WP_002211896.1;Name=WP_002211896.1;Ontology_term=GO:0000105,GO:0003879,GO:0005737;gbkey=CDS;gene=hisG;go_component=cytoplasm|0005737||IEA;go_function=ATP phosphoribosyltransferase activity|0003879||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005128078.1;locus_tag=AD853_RS08920;product=ATP phosphoribosyltransferase;protein_id=WP_002211896.1;transl_table=11 NZ_CPUY01000008.1 RefSeq gene 10385 11716 . + . ID=gene-AD853_RS08925;Name=hisD;gbkey=Gene;gene=hisD;gene_biotype=protein_coding;locus_tag=AD853_RS08925;old_locus_tag=ERS008462_01811 NZ_CPUY01000008.1 Protein Homology CDS 10385 11716 . + 0 ID=cds-WP_002211895.1;Parent=gene-AD853_RS08925;Dbxref=GenBank:WP_002211895.1;Name=WP_002211895.1;Ontology_term=GO:0000105,GO:0004399,GO:0046872,GO:0051287;gbkey=CDS;gene=hisD;go_function=histidinol dehydrogenase activity|0004399||IEA,metal ion binding|0046872||IEA,NAD binding|0051287||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211895.1;locus_tag=AD853_RS08925;product=histidinol dehydrogenase;protein_id=WP_002211895.1;transl_table=11 NZ_CPUY01000008.1 RefSeq gene 11719 12867 . + . ID=gene-AD853_RS08930;Name=hisC;gbkey=Gene;gene=hisC;gene_biotype=protein_coding;locus_tag=AD853_RS08930;old_locus_tag=ERS008462_01812 NZ_CPUY01000008.1 Protein Homology CDS 11719 12867 . + 0 ID=cds-WP_038824671.1;Parent=gene-AD853_RS08930;Dbxref=GenBank:WP_038824671.1;Name=WP_038824671.1;Ontology_term=GO:0000105,GO:0004400;gbkey=CDS;gene=hisC;go_function=histidinol-phosphate transaminase activity|0004400||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304245.1;locus_tag=AD853_RS08930;product=histidinol-phosphate transaminase;protein_id=WP_038824671.1;transl_table=11 NZ_CPUY01000008.1 RefSeq gene 12864 13931 . + . ID=gene-AD853_RS08935;Name=hisB;gbkey=Gene;gene=hisB;gene_biotype=protein_coding;locus_tag=AD853_RS08935;old_locus_tag=ERS008462_01813 NZ_CPUY01000008.1 Protein Homology CDS 12864 13931 . + 0 ID=cds-WP_011192120.1;Parent=gene-AD853_RS08935;Dbxref=GenBank:WP_011192120.1;Name=WP_011192120.1;Ontology_term=GO:0000105,GO:0004401,GO:0004424;gbkey=CDS;gene=hisB;go_function=histidinol-phosphatase activity|0004401||IEA,imidazoleglycerol-phosphate dehydratase activity|0004424||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211893.1;locus_tag=AD853_RS08935;product=bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB;protein_id=WP_011192120.1;transl_table=11 NZ_CPUY01000008.1 RefSeq gene 13931 14521 . + . ID=gene-AD853_RS08940;Name=hisH;gbkey=Gene;gene=hisH;gene_biotype=protein_coding;locus_tag=AD853_RS08940;old_locus_tag=ERS008462_01814 NZ_CPUY01000008.1 Protein Homology CDS 13931 14521 . + 0 ID=cds-WP_002211892.1;Parent=gene-AD853_RS08940;Dbxref=GenBank:WP_002211892.1;Name=WP_002211892.1;Ontology_term=GO:0000105,GO:0000107;gbkey=CDS;gene=hisH;go_function=imidazoleglycerol-phosphate synthase activity|0000107||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002224715.1;locus_tag=AD853_RS08940;product=imidazole glycerol phosphate synthase subunit HisH;protein_id=WP_002211892.1;transl_table=11 NZ_CPUY01000008.1 RefSeq gene 14527 15264 . + . ID=gene-AD853_RS08945;Name=hisA;gbkey=Gene;gene=hisA;gene_biotype=protein_coding;locus_tag=AD853_RS08945;old_locus_tag=ERS008462_01815 NZ_CPUY01000008.1 Protein Homology CDS 14527 15264 . + 0 ID=cds-WP_002211891.1;Parent=gene-AD853_RS08945;Dbxref=GenBank:WP_002211891.1;Name=WP_002211891.1;Ontology_term=GO:0000105,GO:0003949;gbkey=CDS;gene=hisA;go_function=1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity|0003949||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011171818.1;locus_tag=AD853_RS08945;product=1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase;protein_id=WP_002211891.1;transl_table=11 NZ_CPUY01000008.1 RefSeq gene 15246 16022 . + . ID=gene-AD853_RS08950;Name=hisF;gbkey=Gene;gene=hisF;gene_biotype=protein_coding;locus_tag=AD853_RS08950;old_locus_tag=ERS008462_01816 NZ_CPUY01000008.1 Protein Homology CDS 15246 16022 . + 0 ID=cds-WP_002211890.1;Parent=gene-AD853_RS08950;Dbxref=GenBank:WP_002211890.1;Name=WP_002211890.1;Ontology_term=GO:0000105,GO:0000107;gbkey=CDS;gene=hisF;go_function=imidazoleglycerol-phosphate synthase activity|0000107||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227842.1;locus_tag=AD853_RS08950;product=imidazole glycerol phosphate synthase subunit HisF;protein_id=WP_002211890.1;transl_table=11 NZ_CPUY01000008.1 RefSeq gene 16016 16630 . + . ID=gene-AD853_RS08955;Name=hisIE;gbkey=Gene;gene=hisIE;gene_biotype=protein_coding;locus_tag=AD853_RS08955;old_locus_tag=ERS008462_01817 NZ_CPUY01000008.1 Protein Homology CDS 16016 16630 . + 0 ID=cds-WP_012105321.1;Parent=gene-AD853_RS08955;Dbxref=GenBank:WP_012105321.1;Name=WP_012105321.1;Ontology_term=GO:0000105,GO:0004635,GO:0004636;gbkey=CDS;gene=hisIE;go_function=phosphoribosyl-AMP cyclohydrolase activity|0004635||IEA,phosphoribosyl-ATP diphosphatase activity|0004636||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211889.1;locus_tag=AD853_RS08955;product=bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE;protein_id=WP_012105321.1;transl_table=11 NZ_CPUY01000008.1 RefSeq gene 16830 18239 . - . ID=gene-AD853_RS08960;Name=gndA;gbkey=Gene;gene=gndA;gene_biotype=protein_coding;locus_tag=AD853_RS08960;old_locus_tag=ERS008462_01818 NZ_CPUY01000008.1 Protein Homology CDS 16830 18239 . - 0 ID=cds-WP_038824669.1;Parent=gene-AD853_RS08960;Dbxref=GenBank:WP_038824669.1;Name=WP_038824669.1;Ontology_term=GO:0006098,GO:0004616,GO:0050661;gbkey=CDS;gene=gndA;go_function=phosphogluconate dehydrogenase (decarboxylating) activity|0004616||IEA,NADP binding|0050661||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002264784.1;locus_tag=AD853_RS08960;product=NADP-dependent phosphogluconate dehydrogenase;protein_id=WP_038824669.1;transl_table=11 NZ_CPUY01000008.1 RefSeq gene 18625 19518 . - . ID=gene-AD853_RS08965;Name=galU;gbkey=Gene;gene=galU;gene_biotype=protein_coding;locus_tag=AD853_RS08965;old_locus_tag=ERS008462_01819 NZ_CPUY01000008.1 Protein Homology CDS 18625 19518 . - 0 ID=cds-WP_002211887.1;Parent=gene-AD853_RS08965;Dbxref=GenBank:WP_002211887.1;Name=WP_002211887.1;Ontology_term=GO:0006011,GO:0003983;gbkey=CDS;gene=galU;go_function=UTP:glucose-1-phosphate uridylyltransferase activity|0003983||IEA;go_process=UDP-alpha-D-glucose metabolic process|0006011||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211887.1;locus_tag=AD853_RS08965;product=UTP--glucose-1-phosphate uridylyltransferase GalU;protein_id=WP_002211887.1;transl_table=11 NZ_CPUY01000008.1 RefSeq gene 19584 20474 . - . ID=gene-AD853_RS08970;Name=galU;gbkey=Gene;gene=galU;gene_biotype=protein_coding;locus_tag=AD853_RS08970;old_locus_tag=ERS008462_01820 NZ_CPUY01000008.1 Protein Homology CDS 19584 20474 . - 0 ID=cds-WP_002211886.1;Parent=gene-AD853_RS08970;Dbxref=GenBank:WP_002211886.1;Name=WP_002211886.1;Ontology_term=GO:0006011,GO:0003983;gbkey=CDS;gene=galU;go_function=UTP:glucose-1-phosphate uridylyltransferase activity|0003983||IEA;go_process=UDP-alpha-D-glucose metabolic process|0006011||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211886.1;locus_tag=AD853_RS08970;product=UTP--glucose-1-phosphate uridylyltransferase GalU;protein_id=WP_002211886.1;transl_table=11 NZ_CPUY01000008.1 RefSeq gene 21419 23233 . + . ID=gene-AD853_RS08975;Name=AD853_RS08975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS08975;old_locus_tag=ERS008462_01821 NZ_CPUY01000008.1 Protein Homology CDS 21419 23233 . + 0 ID=cds-WP_038824668.1;Parent=gene-AD853_RS08975;Dbxref=GenBank:WP_038824668.1;Name=WP_038824668.1;Ontology_term=GO:0019290;gbkey=CDS;go_process=siderophore biosynthetic process|0019290||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211884.1;locus_tag=AD853_RS08975;product=IucA/IucC family protein;protein_id=WP_038824668.1;transl_table=11 NZ_CPUY01000008.1 RefSeq gene 23446 25707 . + . ID=gene-AD853_RS08980;Name=AD853_RS08980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS08980;old_locus_tag=ERS008462_01822 NZ_CPUY01000008.1 Protein Homology CDS 23446 25707 . + 0 ID=cds-WP_038824667.1;Parent=gene-AD853_RS08980;Dbxref=GenBank:WP_038824667.1;Name=WP_038824667.1;Ontology_term=GO:0015891,GO:0055085,GO:0015267,GO:0046872,GO:0009279,GO:0016020;gbkey=CDS;go_component=cell outer membrane|0009279||IEA,membrane|0016020||IEA;go_function=channel activity|0015267||IEA,metal ion binding|0046872||IEA;go_process=siderophore transport|0015891||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105324.1;locus_tag=AD853_RS08980;product=TonB-dependent siderophore receptor;protein_id=WP_038824667.1;transl_table=11 NZ_CPUY01000008.1 RefSeq gene 25797 26876 . + . ID=gene-AD853_RS08985;Name=AD853_RS08985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS08985;old_locus_tag=ERS008462_01823 NZ_CPUY01000008.1 Protein Homology CDS 25797 26876 . + 0 ID=cds-WP_002211882.1;Parent=gene-AD853_RS08985;Dbxref=GenBank:WP_002211882.1;Name=WP_002211882.1;Ontology_term=GO:0015891,GO:0005524,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=siderophore transport|0015891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211882.1;locus_tag=AD853_RS08985;product=iron-siderophore ABC transporter substrate-binding protein;protein_id=WP_002211882.1;transl_table=11 NZ_CPUY01000008.1 RefSeq gene 26873 27913 . + . ID=gene-AD853_RS08990;Name=AD853_RS08990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS08990;old_locus_tag=ERS008462_01824 NZ_CPUY01000008.1 Protein Homology CDS 26873 27913 . + 0 ID=cds-WP_011192115.1;Parent=gene-AD853_RS08990;Dbxref=GenBank:WP_011192115.1;Name=WP_011192115.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192115.1;locus_tag=AD853_RS08990;product=FecCD family ABC transporter permease;protein_id=WP_011192115.1;transl_table=11 NZ_CPUY01000008.1 RefSeq gene 27900 28940 . + . ID=gene-AD853_RS08995;Name=AD853_RS08995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS08995;old_locus_tag=ERS008462_01825 NZ_CPUY01000008.1 Protein Homology CDS 27900 28940 . + 0 ID=cds-WP_038825474.1;Parent=gene-AD853_RS08995;Dbxref=GenBank:WP_038825474.1;Name=WP_038825474.1;Ontology_term=GO:0006826,GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=iron ion transport|0006826||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105326.1;locus_tag=AD853_RS08995;product=FecCD family ABC transporter permease;protein_id=WP_038825474.1;transl_table=11 NZ_CPUY01000008.1 RefSeq gene 28967 29785 . + . ID=gene-AD853_RS09000;Name=AD853_RS09000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS09000;old_locus_tag=ERS008462_01826 NZ_CPUY01000008.1 Protein Homology CDS 28967 29785 . + 0 ID=cds-WP_002211879.1;Parent=gene-AD853_RS09000;Dbxref=GenBank:WP_002211879.1;Name=WP_002211879.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211879.1;locus_tag=AD853_RS09000;product=ABC transporter ATP-binding protein;protein_id=WP_002211879.1;transl_table=11 NZ_CPUY01000008.1 RefSeq gene 29912 31756 . - . ID=gene-AD853_RS09005;Name=AD853_RS09005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS09005;old_locus_tag=ERS008462_01827 NZ_CPUY01000008.1 Protein Homology CDS 29912 31756 . - 0 ID=cds-WP_032466251.1;Parent=gene-AD853_RS09005;Dbxref=GenBank:WP_032466251.1;Name=WP_032466251.1;Ontology_term=GO:0019290;gbkey=CDS;go_process=siderophore biosynthetic process|0019290||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105327.1;locus_tag=AD853_RS09005;product=IucA/IucC family protein;protein_id=WP_032466251.1;transl_table=11 NZ_CPUY01000008.1 RefSeq gene 31753 32331 . - . ID=gene-AD853_RS09010;Name=AD853_RS09010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS09010;old_locus_tag=ERS008462_01828 NZ_CPUY01000008.1 Protein Homology CDS 31753 32331 . - 0 ID=cds-WP_002214999.1;Parent=gene-AD853_RS09010;Dbxref=GenBank:WP_002214999.1;Name=WP_002214999.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002214999.1;locus_tag=AD853_RS09010;product=GNAT family N-acetyltransferase;protein_id=WP_002214999.1;transl_table=11 NZ_CPUY01000008.1 RefSeq gene 32331 33629 . - . ID=gene-AD853_RS09015;Name=AD853_RS09015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS09015;old_locus_tag=ERS008462_01829 NZ_CPUY01000008.1 Protein Homology CDS 32331 33629 . - 0 ID=cds-WP_038824252.1;Parent=gene-AD853_RS09015;Dbxref=GenBank:WP_038824252.1;Name=WP_038824252.1;Ontology_term=GO:0004497;gbkey=CDS;go_function=monooxygenase activity|0004497||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016260125.1;locus_tag=AD853_RS09015;product=lysine N(6)-hydroxylase/L-ornithine N(5)-oxygenase family protein;protein_id=WP_038824252.1;transl_table=11 NZ_CPUY01000008.1 RefSeq pseudogene 33664 35215 . - . ID=gene-AD853_RS09020;Name=AD853_RS09020;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD853_RS09020;old_locus_tag=ERS008462_01831;pseudo=true NZ_CPUY01000008.1 Protein Homology CDS 33664 35215 . - 0 ID=cds-AD853_RS09020;Parent=gene-AD853_RS09020;Note=frameshifted;Ontology_term=GO:0019752,GO:0016830,GO:0030170;gbkey=CDS;go_function=carbon-carbon lyase activity|0016830||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=carboxylic acid metabolic process|0019752||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211877.1;locus_tag=AD853_RS09020;product=pyridoxal phosphate-dependent decarboxylase family protein;pseudo=true;transl_table=11 NZ_CPUY01000008.1 RefSeq gene 35366 36145 . - . ID=gene-AD853_RS09025;Name=fhuF;gbkey=Gene;gene=fhuF;gene_biotype=protein_coding;locus_tag=AD853_RS09025;old_locus_tag=ERS008462_01832 NZ_CPUY01000008.1 Protein Homology CDS 35366 36145 . - 0 ID=cds-WP_038824250.1;Parent=gene-AD853_RS09025;Dbxref=GenBank:WP_038824250.1;Name=WP_038824250.1;Ontology_term=GO:0051537;gbkey=CDS;gene=fhuF;go_function=2 iron%2C 2 sulfur cluster binding|0051537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211876.1;locus_tag=AD853_RS09025;product=siderophore-iron reductase FhuF;protein_id=WP_038824250.1;transl_table=11 NZ_CPUY01000008.1 RefSeq gene 36587 38173 . + . ID=gene-AD853_RS09030;Name=AD853_RS09030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS09030;old_locus_tag=ERS008462_01833 NZ_CPUY01000008.1 Protein Homology CDS 36587 38173 . + 0 ID=cds-WP_002211875.1;Parent=gene-AD853_RS09030;Dbxref=GenBank:WP_002211875.1;Name=WP_002211875.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004388775.1;locus_tag=AD853_RS09030;product=TerC family protein;protein_id=WP_002211875.1;transl_table=11 NZ_CPUY01000008.1 RefSeq gene 38318 40174 . - . ID=gene-AD853_RS09035;Name=asmA;gbkey=Gene;gene=asmA;gene_biotype=protein_coding;locus_tag=AD853_RS09035;old_locus_tag=ERS008462_01834 NZ_CPUY01000008.1 Protein Homology CDS 38318 40174 . - 0 ID=cds-WP_002211874.1;Parent=gene-AD853_RS09035;Dbxref=GenBank:WP_002211874.1;Name=WP_002211874.1;gbkey=CDS;gene=asmA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211874.1;locus_tag=AD853_RS09035;product=outer membrane assembly protein AsmA;protein_id=WP_002211874.1;transl_table=11 NZ_CPUY01000008.1 RefSeq gene 40361 40942 . - . ID=gene-AD853_RS09040;Name=dcd;gbkey=Gene;gene=dcd;gene_biotype=protein_coding;locus_tag=AD853_RS09040;old_locus_tag=ERS008462_01835 NZ_CPUY01000008.1 Protein Homology CDS 40361 40942 . - 0 ID=cds-WP_002211873.1;Parent=gene-AD853_RS09040;Dbxref=GenBank:WP_002211873.1;Name=WP_002211873.1;Ontology_term=GO:0006229,GO:0008829;gbkey=CDS;gene=dcd;go_function=dCTP deaminase activity|0008829||IEA;go_process=dUTP biosynthetic process|0006229||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004942378.1;locus_tag=AD853_RS09040;product=dCTP deaminase;protein_id=WP_002211873.1;transl_table=11 NZ_CPUY01000008.1 RefSeq gene 41047 41688 . - . ID=gene-AD853_RS09045;Name=udk;gbkey=Gene;gene=udk;gene_biotype=protein_coding;locus_tag=AD853_RS09045;old_locus_tag=ERS008462_01836 NZ_CPUY01000008.1 Protein Homology CDS 41047 41688 . - 0 ID=cds-WP_002211872.1;Parent=gene-AD853_RS09045;Dbxref=GenBank:WP_002211872.1;Name=WP_002211872.1;Ontology_term=GO:0004849;gbkey=CDS;gene=udk;go_function=uridine kinase activity|0004849||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211872.1;locus_tag=AD853_RS09045;product=uridine kinase;protein_id=WP_002211872.1;transl_table=11 NZ_CPUY01000008.1 RefSeq gene 41933 43045 . - . ID=gene-AD853_RS09050;Name=apbC;gbkey=Gene;gene=apbC;gene_biotype=protein_coding;locus_tag=AD853_RS09050;old_locus_tag=ERS008462_01837 NZ_CPUY01000008.1 Protein Homology CDS 41933 43045 . - 0 ID=cds-WP_038399977.1;Parent=gene-AD853_RS09050;Dbxref=GenBank:WP_038399977.1;Name=WP_038399977.1;Ontology_term=GO:0016226,GO:0005524,GO:0016887,GO:0051536;gbkey=CDS;gene=apbC;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211871.1;locus_tag=AD853_RS09050;product=iron-sulfur cluster carrier protein ApbC;protein_id=WP_038399977.1;transl_table=11 NZ_CPUY01000008.1 RefSeq gene 43310 45337 . + . ID=gene-AD853_RS09055;Name=metG;gbkey=Gene;gene=metG;gene_biotype=protein_coding;locus_tag=AD853_RS09055;old_locus_tag=ERS008462_01838 NZ_CPUY01000008.1 Protein Homology CDS 43310 45337 . + 0 ID=cds-WP_038399978.1;Parent=gene-AD853_RS09055;Dbxref=GenBank:WP_038399978.1;Name=WP_038399978.1;Ontology_term=GO:0006431,GO:0000166,GO:0004825,GO:0005524;gbkey=CDS;gene=metG;go_function=nucleotide binding|0000166||IEA,methionine-tRNA ligase activity|0004825||IEA,ATP binding|0005524||IEA;go_process=methionyl-tRNA aminoacylation|0006431||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015839562.1;locus_tag=AD853_RS09055;product=methionine--tRNA ligase;protein_id=WP_038399978.1;transl_table=11 NZ_CPUY01000008.1 RefSeq gene 45466 46128 . - . ID=gene-AD853_RS09060;Name=AD853_RS09060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS09060;old_locus_tag=ERS008462_01839 NZ_CPUY01000008.1 Protein Homology CDS 45466 46128 . - 0 ID=cds-WP_002228565.1;Parent=gene-AD853_RS09060;Dbxref=GenBank:WP_002228565.1;Name=WP_002228565.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002228565.1;locus_tag=AD853_RS09060;product=hypothetical protein;protein_id=WP_002228565.1;transl_table=11 NZ_CPUY01000008.1 RefSeq gene 46830 47909 . + . ID=gene-AD853_RS09065;Name=AD853_RS09065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS09065;old_locus_tag=ERS008462_01840 NZ_CPUY01000008.1 Protein Homology CDS 46830 47909 . + 0 ID=cds-WP_038824249.1;Parent=gene-AD853_RS09065;Dbxref=GenBank:WP_038824249.1;Name=WP_038824249.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211975.1;locus_tag=AD853_RS09065;product=sugar ABC transporter substrate-binding protein;protein_id=WP_038824249.1;transl_table=11 NZ_CPUY01000008.1 RefSeq gene 47927 49180 . + . ID=gene-AD853_RS09070;Name=AD853_RS09070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS09070;old_locus_tag=ERS008462_01841 NZ_CPUY01000008.1 Protein Homology CDS 47927 49180 . + 0 ID=cds-WP_011192108.1;Parent=gene-AD853_RS09070;Dbxref=GenBank:WP_011192108.1;Name=WP_011192108.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192108.1;locus_tag=AD853_RS09070;product=LVIVD repeat-containing protein;protein_id=WP_011192108.1;transl_table=11 NZ_CPUY01000008.1 RefSeq pseudogene 49476 50658 . + . ID=gene-AD853_RS09075;Name=AD853_RS09075;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD853_RS09075;pseudo=true NZ_CPUY01000008.1 Protein Homology CDS 49476 50658 . + 0 ID=cds-AD853_RS09075;Parent=gene-AD853_RS09075;Note=frameshifted;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211973.1;locus_tag=AD853_RS09075;product=MFS transporter;pseudo=true;transl_table=11 NZ_CPUY01000008.1 RefSeq gene 50900 51307 . + . ID=gene-AD853_RS09080;Name=AD853_RS09080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS09080;old_locus_tag=ERS008462_01844 NZ_CPUY01000008.1 Protein Homology CDS 50900 51307 . + 0 ID=cds-WP_002211971.1;Parent=gene-AD853_RS09080;Dbxref=GenBank:WP_002211971.1;Name=WP_002211971.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211971.1;locus_tag=AD853_RS09080;product=CidA/LrgA family protein;protein_id=WP_002211971.1;transl_table=11 NZ_CPUY01000008.1 RefSeq gene 51304 51999 . + . ID=gene-AD853_RS09085;Name=AD853_RS09085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS09085;old_locus_tag=ERS008462_01845 NZ_CPUY01000008.1 Protein Homology CDS 51304 51999 . + 0 ID=cds-WP_011192107.1;Parent=gene-AD853_RS09085;Dbxref=GenBank:WP_011192107.1;Name=WP_011192107.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192107.1;locus_tag=AD853_RS09085;product=CidB/LrgB family autolysis modulator;protein_id=WP_011192107.1;transl_table=11 NZ_CPUY01000008.1 RefSeq gene 52325 53209 . + . ID=gene-AD853_RS09090;Name=cdd;gbkey=Gene;gene=cdd;gene_biotype=protein_coding;locus_tag=AD853_RS09090;old_locus_tag=ERS008462_01846 NZ_CPUY01000008.1 Protein Homology CDS 52325 53209 . + 0 ID=cds-WP_002211969.1;Parent=gene-AD853_RS09090;Dbxref=GenBank:WP_002211969.1;Name=WP_002211969.1;Ontology_term=GO:0008655,GO:0004126,GO:0008270;gbkey=CDS;gene=cdd;go_function=cytidine deaminase activity|0004126||IEA,zinc ion binding|0008270||IEA;go_process=pyrimidine-containing compound salvage|0008655||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002230213.1;locus_tag=AD853_RS09090;product=cytidine deaminase;protein_id=WP_002211969.1;transl_table=11 NZ_CPUY01000008.1 RefSeq gene 53565 55262 . + . ID=gene-AD853_RS09095;Name=AD853_RS09095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS09095;old_locus_tag=ERS008462_01847 NZ_CPUY01000008.1 Protein Homology CDS 53565 55262 . + 0 ID=cds-WP_002211968.1;Parent=gene-AD853_RS09095;Dbxref=GenBank:WP_002211968.1;Name=WP_002211968.1;Ontology_term=GO:0004470,GO:0004471,GO:0046872,GO:0051287;gbkey=CDS;go_function=malic enzyme activity|0004470||IEA,malate dehydrogenase (decarboxylating) (NAD+) activity|0004471||IEA,metal ion binding|0046872||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015835025.1;locus_tag=AD853_RS09095;product=NAD-dependent malic enzyme;protein_id=WP_002211968.1;transl_table=11 NZ_CPUY01000008.1 RefSeq gene 55543 56280 . + . ID=gene-AD853_RS09100;Name=sanA;gbkey=Gene;gene=sanA;gene_biotype=protein_coding;locus_tag=AD853_RS09100;old_locus_tag=ERS008462_01848 NZ_CPUY01000008.1 Protein Homology CDS 55543 56280 . + 0 ID=cds-WP_002211966.1;Parent=gene-AD853_RS09100;Dbxref=GenBank:WP_002211966.1;Name=WP_002211966.1;gbkey=CDS;gene=sanA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211966.1;locus_tag=AD853_RS09100;product=outer membrane permeability protein SanA;protein_id=WP_002211966.1;transl_table=11 NZ_CPUY01000008.1 RefSeq gene 56725 57735 . - . ID=gene-AD853_RS09105;Name=mglC;gbkey=Gene;gene=mglC;gene_biotype=protein_coding;locus_tag=AD853_RS09105;old_locus_tag=ERS008462_01849 NZ_CPUY01000008.1 Protein Homology CDS 56725 57735 . - 0 ID=cds-WP_002211965.1;Parent=gene-AD853_RS09105;Dbxref=GenBank:WP_002211965.1;Name=WP_002211965.1;Ontology_term=GO:0008643,GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=mglC;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416653.1;locus_tag=AD853_RS09105;product=galactose/methyl galactoside ABC transporter permease MglC;protein_id=WP_002211965.1;transl_table=11 NZ_CPUY01000008.1 RefSeq gene 57756 59276 . - . ID=gene-AD853_RS09110;Name=mglA;gbkey=Gene;gene=mglA;gene_biotype=protein_coding;locus_tag=AD853_RS09110;old_locus_tag=ERS008462_01850 NZ_CPUY01000008.1 Protein Homology CDS 57756 59276 . - 0 ID=cds-WP_002211964.1;Parent=gene-AD853_RS09110;Dbxref=GenBank:WP_002211964.1;Name=WP_002211964.1;Ontology_term=GO:0008643,GO:0005524,GO:0043211,GO:0016020;gbkey=CDS;gene=mglA;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type carbohydrate transporter activity|0043211||IEA;go_process=carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211964.1;locus_tag=AD853_RS09110;product=galactose/methyl galactoside ABC transporter ATP-binding protein MglA;protein_id=WP_002211964.1;transl_table=11 NZ_CPUY01000008.1 RefSeq gene 59506 60498 . - . ID=gene-AD853_RS09115;Name=mglB;gbkey=Gene;gene=mglB;gene_biotype=protein_coding;locus_tag=AD853_RS09115;old_locus_tag=ERS008462_01851 NZ_CPUY01000008.1 Protein Homology CDS 59506 60498 . - 0 ID=cds-WP_002211963.1;Parent=gene-AD853_RS09115;Dbxref=GenBank:WP_002211963.1;Name=WP_002211963.1;Ontology_term=GO:0030246;gbkey=CDS;gene=mglB;go_function=carbohydrate binding|0030246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005168257.1;locus_tag=AD853_RS09115;product=galactose/glucose ABC transporter substrate-binding protein MglB;protein_id=WP_002211963.1;transl_table=11 NZ_CPUY01000008.1 RefSeq gene 61246 62412 . - . ID=gene-AD853_RS09120;Name=yeiB;gbkey=Gene;gene=yeiB;gene_biotype=protein_coding;locus_tag=AD853_RS09120;old_locus_tag=ERS008462_01852 NZ_CPUY01000008.1 Protein Homology CDS 61246 62412 . - 0 ID=cds-WP_038824248.1;Parent=gene-AD853_RS09120;Dbxref=GenBank:WP_038824248.1;Name=WP_038824248.1;gbkey=CDS;gene=yeiB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012413631.1;locus_tag=AD853_RS09120;product=DUF418 domain-containing protein YeiB;protein_id=WP_038824248.1;transl_table=11 NZ_CPUY01000008.1 RefSeq gene 62467 63129 . - . ID=gene-AD853_RS09125;Name=folE;gbkey=Gene;gene=folE;gene_biotype=protein_coding;locus_tag=AD853_RS09125;old_locus_tag=ERS008462_01853 NZ_CPUY01000008.1 Protein Homology CDS 62467 63129 . - 0 ID=cds-WP_002211960.1;Parent=gene-AD853_RS09125;Dbxref=GenBank:WP_002211960.1;Name=WP_002211960.1;Ontology_term=GO:0046654,GO:0003934;gbkey=CDS;gene=folE;go_function=GTP cyclohydrolase I activity|0003934||IEA;go_process=tetrahydrofolate biosynthetic process|0046654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211960.1;locus_tag=AD853_RS09125;product=GTP cyclohydrolase I FolE;protein_id=WP_002211960.1;transl_table=11 NZ_CPUY01000008.1 RefSeq gene 63313 64464 . - . ID=gene-AD853_RS09130;Name=AD853_RS09130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS09130;old_locus_tag=ERS008462_01854 NZ_CPUY01000008.1 Protein Homology CDS 63313 64464 . - 0 ID=cds-WP_050124592.1;Parent=gene-AD853_RS09130;Dbxref=GenBank:WP_050124592.1;Name=WP_050124592.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002264795.1;locus_tag=AD853_RS09130;product=YbfB/YjiJ family MFS transporter;protein_id=WP_050124592.1;transl_table=11 NZ_CPUY01000008.1 RefSeq gene 64600 65469 . + . ID=gene-AD853_RS09135;Name=ptrR;gbkey=Gene;gene=ptrR;gene_biotype=protein_coding;locus_tag=AD853_RS09135;old_locus_tag=ERS008462_01855 NZ_CPUY01000008.1 Protein Homology CDS 64600 65469 . + 0 ID=cds-WP_002211958.1;Parent=gene-AD853_RS09135;Dbxref=GenBank:WP_002211958.1;Name=WP_002211958.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=ptrR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211958.1;locus_tag=AD853_RS09135;product=putrescine utilization regulator PtrR;protein_id=WP_002211958.1;transl_table=11 NZ_CPUY01000008.1 RefSeq gene 65743 66882 . + . ID=gene-AD853_RS09140;Name=AD853_RS09140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS09140;old_locus_tag=ERS008462_01856 NZ_CPUY01000008.1 Protein Homology CDS 65743 66882 . + 0 ID=cds-WP_002224699.1;Parent=gene-AD853_RS09140;Dbxref=GenBank:WP_002224699.1;Name=WP_002224699.1;Ontology_term=GO:0004022,GO:0008270,GO:0051903;gbkey=CDS;go_function=alcohol dehydrogenase (NAD+) activity|0004022||IEA,zinc ion binding|0008270||IEA,S-(hydroxymethyl)glutathione dehydrogenase [NAD(P)+] activity|0051903||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211957.1;locus_tag=AD853_RS09140;product=S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase;protein_id=WP_002224699.1;transl_table=11 NZ_CPUY01000008.1 RefSeq gene 66903 67745 . + . ID=gene-AD853_RS09145;Name=fghA;gbkey=Gene;gene=fghA;gene_biotype=protein_coding;locus_tag=AD853_RS09145;old_locus_tag=ERS008462_01857 NZ_CPUY01000008.1 Protein Homology CDS 66903 67745 . + 0 ID=cds-WP_038824245.1;Parent=gene-AD853_RS09145;Dbxref=GenBank:WP_038824245.1;Name=WP_038824245.1;Ontology_term=GO:0046294,GO:0018738;gbkey=CDS;gene=fghA;go_function=S-formylglutathione hydrolase activity|0018738||IEA;go_process=formaldehyde catabolic process|0046294||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192103.1;locus_tag=AD853_RS09145;product=S-formylglutathione hydrolase;protein_id=WP_038824245.1;transl_table=11 NZ_CPUY01000008.1 RefSeq gene 68002 68214 . + . ID=gene-AD853_RS09150;Name=darA-c;gbkey=Gene;gene=darA-c;gene_biotype=protein_coding;locus_tag=AD853_RS09150;old_locus_tag=ERS008462_01858 NZ_CPUY01000008.1 Protein Homology CDS 68002 68214 . + 0 ID=cds-WP_002227980.1;Parent=gene-AD853_RS09150;Dbxref=GenBank:WP_002227980.1;Name=WP_002227980.1;gbkey=CDS;gene=darA-c;inference=COORDINATES: similar to AA sequence:RefSeq:WP_140263806.1;locus_tag=AD853_RS09150;product=peptide antibiotic darobactin C;protein_id=WP_002227980.1;transl_table=11 NZ_CPUY01000008.1 RefSeq gene 68298 70658 . + . ID=gene-AD853_RS09155;Name=darB;gbkey=Gene;gene=darB;gene_biotype=protein_coding;locus_tag=AD853_RS09155;old_locus_tag=ERS008462_01859 NZ_CPUY01000008.1 Protein Homology CDS 68298 70658 . + 0 ID=cds-WP_038824243.1;Parent=gene-AD853_RS09155;Dbxref=GenBank:WP_038824243.1;Name=WP_038824243.1;gbkey=CDS;gene=darB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002215886.1;locus_tag=AD853_RS09155;product=darobactin export ABC transporter permease subunit;protein_id=WP_038824243.1;transl_table=11 NZ_CPUY01000008.1 RefSeq gene 70660 71922 . + . ID=gene-AD853_RS09160;Name=darC;gbkey=Gene;gene=darC;gene_biotype=protein_coding;locus_tag=AD853_RS09160;old_locus_tag=ERS008462_01860 NZ_CPUY01000008.1 Protein Homology CDS 70660 71922 . + 0 ID=cds-WP_038824242.1;Parent=gene-AD853_RS09160;Dbxref=GenBank:WP_038824242.1;Name=WP_038824242.1;gbkey=CDS;gene=darC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211952.1;locus_tag=AD853_RS09160;product=darobactin export ABC transporter periplasmic adaptor subunit;protein_id=WP_038824242.1;transl_table=11 NZ_CPUY01000008.1 RefSeq gene 71924 72592 . + . ID=gene-AD853_RS09165;Name=darD;gbkey=Gene;gene=darD;gene_biotype=protein_coding;locus_tag=AD853_RS09165;old_locus_tag=ERS008462_01861 NZ_CPUY01000008.1 Protein Homology CDS 71924 72592 . + 0 ID=cds-WP_012105336.1;Parent=gene-AD853_RS09165;Dbxref=GenBank:WP_012105336.1;Name=WP_012105336.1;gbkey=CDS;gene=darD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105336.1;locus_tag=AD853_RS09165;product=darobactin export ABC transporter ATP-binding protein;protein_id=WP_012105336.1;transl_table=11 NZ_CPUY01000008.1 RefSeq gene 72602 73912 . + . ID=gene-AD853_RS09170;Name=darE;gbkey=Gene;gene=darE;gene_biotype=protein_coding;locus_tag=AD853_RS09170;old_locus_tag=ERS008462_01862 NZ_CPUY01000008.1 Protein Homology CDS 72602 73912 . + 0 ID=cds-WP_038824241.1;Parent=gene-AD853_RS09170;Dbxref=GenBank:WP_038824241.1;Name=WP_038824241.1;gbkey=CDS;gene=darE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016581226.1;locus_tag=AD853_RS09170;product=darobactin maturation radical SAM/SPASM protein DarE;protein_id=WP_038824241.1;transl_table=11 NZ_CPUY01000008.1 RefSeq gene 74447 75721 . + . ID=gene-AD853_RS09175;Name=moeA;gbkey=Gene;gene=moeA;gene_biotype=protein_coding;locus_tag=AD853_RS09175;old_locus_tag=ERS008462_01863 NZ_CPUY01000008.1 Protein Homology CDS 74447 75721 . + 0 ID=cds-WP_012105337.1;Parent=gene-AD853_RS09175;Dbxref=GenBank:WP_012105337.1;Name=WP_012105337.1;Ontology_term=GO:0006777,GO:0032324;gbkey=CDS;gene=moeA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA,molybdopterin cofactor biosynthetic process|0032324||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304265.1;locus_tag=AD853_RS09175;product=molybdopterin molybdotransferase MoeA;protein_id=WP_012105337.1;transl_table=11 NZ_CPUY01000008.1 RefSeq gene 75723 76493 . + . ID=gene-AD853_RS09180;Name=moeB;gbkey=Gene;gene=moeB;gene_biotype=protein_coding;locus_tag=AD853_RS09180;old_locus_tag=ERS008462_01864 NZ_CPUY01000008.1 Protein Homology CDS 75723 76493 . + 0 ID=cds-WP_002211948.1;Parent=gene-AD853_RS09180;Dbxref=GenBank:WP_002211948.1;Name=WP_002211948.1;Ontology_term=GO:0006777,GO:0008641;gbkey=CDS;gene=moeB;go_function=ubiquitin-like modifier activating enzyme activity|0008641||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211948.1;locus_tag=AD853_RS09180;product=molybdopterin-synthase adenylyltransferase MoeB;protein_id=WP_002211948.1;transl_table=11 NZ_CPUY01000008.1 RefSeq gene 76565 77212 . - . ID=gene-AD853_RS09185;Name=AD853_RS09185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS09185;old_locus_tag=ERS008462_01865 NZ_CPUY01000008.1 Protein Homology CDS 76565 77212 . - 0 ID=cds-WP_012105338.1;Parent=gene-AD853_RS09185;Dbxref=GenBank:WP_012105338.1;Name=WP_012105338.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012413629.1;locus_tag=AD853_RS09185;product=NleF caspase inhibitor;protein_id=WP_012105338.1;transl_table=11 NZ_CPUY01000008.1 RefSeq gene 77430 79025 . - . ID=gene-AD853_RS09190;Name=AD853_RS09190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS09190;old_locus_tag=ERS008462_01866 NZ_CPUY01000008.1 Protein Homology CDS 77430 79025 . - 0 ID=cds-WP_012105339.1;Parent=gene-AD853_RS09190;Dbxref=GenBank:WP_012105339.1;Name=WP_012105339.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002227996.1;locus_tag=AD853_RS09190;product=ABC-F family ATPase;protein_id=WP_012105339.1;transl_table=11 NZ_CPUY01000008.1 RefSeq gene 79709 80332 . + . ID=gene-AD853_RS09195;Name=AD853_RS09195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS09195;old_locus_tag=ERS008462_01867 NZ_CPUY01000008.1 Protein Homology CDS 79709 80332 . + 0 ID=cds-WP_038825108.1;Parent=gene-AD853_RS09195;Dbxref=GenBank:WP_038825108.1;Name=WP_038825108.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105340.1;locus_tag=AD853_RS09195;product=NleF caspase inhibitor;protein_id=WP_038825108.1;transl_table=11 NZ_CPUY01000008.1 RefSeq pseudogene 80540 81907 . - . ID=gene-AD853_RS09200;Name=AD853_RS09200;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD853_RS09200;old_locus_tag=ERS008462_01868;pseudo=true NZ_CPUY01000008.1 Protein Homology CDS 80540 81907 . - 0 ID=cds-AD853_RS09200;Parent=gene-AD853_RS09200;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304269.1;locus_tag=AD853_RS09200;product=VasL domain-containing protein;pseudo=true;transl_table=11 NZ_CPUY01000008.1 RefSeq gene 81932 82384 . - . ID=gene-AD853_RS09205;Name=tssE;gbkey=Gene;gene=tssE;gene_biotype=protein_coding;locus_tag=AD853_RS09205;old_locus_tag=ERS008462_01870 NZ_CPUY01000008.1 Protein Homology CDS 81932 82384 . - 0 ID=cds-WP_002211943.1;Parent=gene-AD853_RS09205;Dbxref=GenBank:WP_002211943.1;Name=WP_002211943.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssE;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192093.1;locus_tag=AD853_RS09205;product=type VI secretion system baseplate subunit TssE;protein_id=WP_002211943.1;transl_table=11 NZ_CPUY01000008.1 RefSeq gene 82384 82965 . - . ID=gene-AD853_RS09210;Name=tssJ;gbkey=Gene;gene=tssJ;gene_biotype=protein_coding;locus_tag=AD853_RS09210;old_locus_tag=ERS008462_01871 NZ_CPUY01000008.1 Protein Homology CDS 82384 82965 . - 0 ID=cds-WP_038825107.1;Parent=gene-AD853_RS09210;Dbxref=GenBank:WP_038825107.1;Name=WP_038825107.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssJ;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002214552.1;locus_tag=AD853_RS09210;product=type VI secretion system lipoprotein TssJ;protein_id=WP_038825107.1;transl_table=11 NZ_CPUY01000008.1 RefSeq gene 82940 84025 . - . ID=gene-AD853_RS09215;Name=tssG;gbkey=Gene;gene=tssG;gene_biotype=protein_coding;locus_tag=AD853_RS09215;old_locus_tag=ERS008462_01872 NZ_CPUY01000008.1 Protein Homology CDS 82940 84025 . - 0 ID=cds-WP_012413626.1;Parent=gene-AD853_RS09215;Dbxref=GenBank:WP_012413626.1;Name=WP_012413626.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssG;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016674055.1;locus_tag=AD853_RS09215;product=type VI secretion system baseplate subunit TssG;protein_id=WP_012413626.1;transl_table=11 NZ_CPUY01000008.1 RefSeq gene 83989 85752 . - . ID=gene-AD853_RS09220;Name=tssF;gbkey=Gene;gene=tssF;gene_biotype=protein_coding;locus_tag=AD853_RS09220;old_locus_tag=ERS008462_01873 NZ_CPUY01000008.1 Protein Homology CDS 83989 85752 . - 0 ID=cds-WP_038825106.1;Parent=gene-AD853_RS09220;Dbxref=GenBank:WP_038825106.1;Name=WP_038825106.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssF;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001536307.1;locus_tag=AD853_RS09220;product=type VI secretion system baseplate subunit TssF;protein_id=WP_038825106.1;transl_table=11 NZ_CPUY01000008.1 RefSeq gene 85844 86302 . - . ID=gene-AD853_RS09225;Name=AD853_RS09225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS09225;old_locus_tag=ERS008462_01874 NZ_CPUY01000008.1 Protein Homology CDS 85844 86302 . - 0 ID=cds-WP_012105345.1;Parent=gene-AD853_RS09225;Dbxref=GenBank:WP_012105345.1;Name=WP_012105345.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017866.6;locus_tag=AD853_RS09225;product=DUF943 family protein;protein_id=WP_012105345.1;transl_table=11 NZ_CPUY01000008.1 RefSeq gene 86305 86985 . - . ID=gene-AD853_RS22635;Name=AD853_RS22635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS22635;old_locus_tag=ERS008462_01875 NZ_CPUY01000008.1 Protein Homology CDS 86305 86985 . - 0 ID=cds-WP_223847759.1;Parent=gene-AD853_RS22635;Dbxref=GenBank:WP_223847759.1;Name=WP_223847759.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR03034.1;locus_tag=AD853_RS22635;product=DUF3289 family protein;protein_id=WP_223847759.1;transl_table=11 NZ_CPUY01000008.1 RefSeq pseudogene 87145 87420 . - . ID=gene-AD853_RS22640;Name=AD853_RS22640;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD853_RS22640;partial=true;pseudo=true;start_range=.,87145 NZ_CPUY01000008.1 Protein Homology CDS 87145 87420 . - 0 ID=cds-AD853_RS22640;Parent=gene-AD853_RS22640;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0008270;gbkey=CDS;go_function=zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211938.1;locus_tag=AD853_RS22640;partial=true;product=PAAR domain-containing protein;pseudo=true;start_range=.,87145;transl_table=11 NZ_CPUY01000008.1 RefSeq pseudogene 87438 89037 . - . ID=gene-AD853_RS09240;Name=tssA;gbkey=Gene;gene=tssA;gene_biotype=pseudogene;locus_tag=AD853_RS09240;pseudo=true NZ_CPUY01000008.1 Protein Homology CDS 87438 89037 . - 0 ID=cds-AD853_RS09240;Parent=gene-AD853_RS09240;Note=frameshifted;gbkey=CDS;gene=tssA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211937.1;locus_tag=AD853_RS09240;product=type VI secretion system protein TssA;pseudo=true;transl_table=11 NZ_CPUY01000008.1 RefSeq gene 89081 92503 . - . ID=gene-AD853_RS09245;Name=AD853_RS09245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS09245;old_locus_tag=ERS008462_01879 NZ_CPUY01000008.1 Protein Homology CDS 89081 92503 . - 0 ID=cds-WP_038825737.1;Parent=gene-AD853_RS09245;Dbxref=GenBank:WP_038825737.1;Name=WP_038825737.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211936.1;locus_tag=AD853_RS09245;product=ImcF-related family protein;protein_id=WP_038825737.1;transl_table=11 NZ_CPUY01000008.1 RefSeq gene 92500 93732 . - . ID=gene-AD853_RS09250;Name=AD853_RS09250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS09250;old_locus_tag=ERS008462_01880 NZ_CPUY01000008.1 Protein Homology CDS 92500 93732 . - 0 ID=cds-WP_038825098.1;Parent=gene-AD853_RS09250;Dbxref=GenBank:WP_038825098.1;Name=WP_038825098.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016674153.1;locus_tag=AD853_RS09250;product=hypothetical protein;protein_id=WP_038825098.1;transl_table=11 NZ_CPUY01000008.1 RefSeq pseudogene 94563 95433 . + . ID=gene-AD853_RS21320;Name=AD853_RS21320;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD853_RS21320;pseudo=true NZ_CPUY01000008.1 Protein Homology CDS 94563 95433 . + 0 ID=cds-AD853_RS21320;Parent=gene-AD853_RS21320;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011146697.1;locus_tag=AD853_RS21320;product=transposase;pseudo=true;transl_table=11 NZ_CPUY01000008.1 RefSeq gene 95893 96558 . - . ID=gene-AD853_RS09260;Name=AD853_RS09260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS09260;old_locus_tag=ERS008462_01882 NZ_CPUY01000008.1 GeneMarkS-2+ CDS 95893 96558 . - 0 ID=cds-WP_050124593.1;Parent=gene-AD853_RS09260;Dbxref=GenBank:WP_050124593.1;Name=WP_050124593.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AD853_RS09260;product=hypothetical protein;protein_id=WP_050124593.1;transl_table=11 NZ_CPUY01000008.1 RefSeq gene 96555 98738 . - . ID=gene-AD853_RS09265;Name=AD853_RS09265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS09265;old_locus_tag=ERS008462_01883 NZ_CPUY01000008.1 Protein Homology CDS 96555 98738 . - 0 ID=cds-WP_038825009.1;Parent=gene-AD853_RS09265;Dbxref=GenBank:WP_038825009.1;Name=WP_038825009.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211932.1;locus_tag=AD853_RS09265;product=M23 family metallopeptidase;protein_id=WP_038825009.1;transl_table=11 NZ_CPUY01000008.1 RefSeq gene 98754 99014 . - . ID=gene-AD853_RS09270;Name=AD853_RS09270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS09270;old_locus_tag=ERS008462_01884 NZ_CPUY01000008.1 Protein Homology CDS 98754 99014 . - 0 ID=cds-WP_002211931.1;Parent=gene-AD853_RS09270;Dbxref=GenBank:WP_002211931.1;Name=WP_002211931.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002376836.1;locus_tag=AD853_RS09270;product=DUF2345 domain-containing protein;protein_id=WP_002211931.1;transl_table=11 NZ_CPUY01000008.1 RefSeq gene 99168 99941 . - . ID=gene-AD853_RS09275;Name=AD853_RS09275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS09275;old_locus_tag=ERS008462_01885 NZ_CPUY01000008.1 Protein Homology CDS 99168 99941 . - 0 ID=cds-WP_038825357.1;Parent=gene-AD853_RS09275;Dbxref=GenBank:WP_038825357.1;Name=WP_038825357.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211930.1;locus_tag=AD853_RS09275;product=hypothetical protein;protein_id=WP_038825357.1;transl_table=11 NZ_CPUY01000008.1 RefSeq gene 99938 102238 . - . ID=gene-AD853_RS09280;Name=AD853_RS09280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS09280;old_locus_tag=ERS008462_01886 NZ_CPUY01000008.1 Protein Homology CDS 99938 102238 . - 0 ID=cds-WP_012105356.1;Parent=gene-AD853_RS09280;Dbxref=GenBank:WP_012105356.1;Name=WP_012105356.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211929.1;locus_tag=AD853_RS09280;product=M23 family metallopeptidase;protein_id=WP_012105356.1;transl_table=11 NZ_CPUY01000008.1 RefSeq gene 102254 104602 . - . ID=gene-AD853_RS09285;Name=vgrG;gbkey=Gene;gene=vgrG;gene_biotype=protein_coding;locus_tag=AD853_RS09285;old_locus_tag=ERS008462_01887 NZ_CPUY01000008.1 Protein Homology CDS 102254 104602 . - 0 ID=cds-WP_050124594.1;Parent=gene-AD853_RS09285;Dbxref=GenBank:WP_050124594.1;Name=WP_050124594.1;gbkey=CDS;gene=vgrG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015683911.1;locus_tag=AD853_RS09285;product=type VI secretion system tip protein VgrG;protein_id=WP_050124594.1;transl_table=11 NZ_CPUY01000008.1 RefSeq gene 104605 107247 . - . ID=gene-AD853_RS09290;Name=tssH;gbkey=Gene;gene=tssH;gene_biotype=protein_coding;gene_synonym=clpV;locus_tag=AD853_RS09290;old_locus_tag=ERS008462_01888 NZ_CPUY01000008.1 Protein Homology CDS 104605 107247 . - 0 ID=cds-WP_038824693.1;Parent=gene-AD853_RS09290;Dbxref=GenBank:WP_038824693.1;Name=WP_038824693.1;Ontology_term=GO:0033103,GO:0016887,GO:0033104;gbkey=CDS;gene=tssH;go_component=type VI protein secretion system complex|0033104||IEA;go_function=ATP hydrolysis activity|0016887||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012303637.1;locus_tag=AD853_RS09290;product=type VI secretion system ATPase TssH;protein_id=WP_038824693.1;transl_table=11 NZ_CPUY01000008.1 RefSeq gene 107665 108156 . - . ID=gene-AD853_RS09295;Name=AD853_RS09295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS09295;old_locus_tag=ERS008462_01889 NZ_CPUY01000008.1 Protein Homology CDS 107665 108156 . - 0 ID=cds-WP_038824691.1;Parent=gene-AD853_RS09295;Dbxref=GenBank:WP_038824691.1;Name=WP_038824691.1;Ontology_term=GO:0033103;gbkey=CDS;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226602.1;locus_tag=AD853_RS09295;product=Hcp family type VI secretion system effector;protein_id=WP_038824691.1;transl_table=11 NZ_CPUY01000008.1 RefSeq gene 108160 109896 . - . ID=gene-AD853_RS09300;Name=AD853_RS09300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS09300;old_locus_tag=ERS008462_01890 NZ_CPUY01000008.1 Protein Homology CDS 108160 109896 . - 0 ID=cds-WP_038824690.1;Parent=gene-AD853_RS09300;Dbxref=GenBank:WP_038824690.1;Name=WP_038824690.1;Ontology_term=GO:0015288,GO:0042834,GO:0009279,GO:0016020;gbkey=CDS;go_component=cell outer membrane|0009279||IEA,membrane|0016020||IEA;go_function=porin activity|0015288||IEA,peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015683668.1;locus_tag=AD853_RS09300;product=OmpA family protein;protein_id=WP_038824690.1;transl_table=11 NZ_CPUY01000008.1 RefSeq gene 109896 110582 . - . ID=gene-AD853_RS09305;Name=tssL;gbkey=Gene;gene=tssL;gene_biotype=protein_coding;locus_tag=AD853_RS09305;old_locus_tag=ERS008462_01891 NZ_CPUY01000008.1 Protein Homology CDS 109896 110582 . - 0 ID=cds-WP_038824688.1;Parent=gene-AD853_RS09305;Dbxref=GenBank:WP_038824688.1;Name=WP_038824688.1;gbkey=CDS;gene=tssL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012104585.1;locus_tag=AD853_RS09305;product=type VI secretion system protein TssL%2C short form;protein_id=WP_038824688.1;transl_table=11 NZ_CPUY01000008.1 RefSeq gene 110579 111931 . - . ID=gene-AD853_RS09310;Name=tssK;gbkey=Gene;gene=tssK;gene_biotype=protein_coding;locus_tag=AD853_RS09310;old_locus_tag=ERS008462_01892 NZ_CPUY01000008.1 Protein Homology CDS 110579 111931 . - 0 ID=cds-WP_038824687.1;Parent=gene-AD853_RS09310;Dbxref=GenBank:WP_038824687.1;Name=WP_038824687.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssK;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002213011.1;locus_tag=AD853_RS09310;product=type VI secretion system baseplate subunit TssK;protein_id=WP_038824687.1;transl_table=11 NZ_CPUY01000008.1 RefSeq gene 111943 113487 . - . ID=gene-AD853_RS09315;Name=tssC;gbkey=Gene;gene=tssC;gene_biotype=protein_coding;locus_tag=AD853_RS09315;old_locus_tag=ERS008462_01893 NZ_CPUY01000008.1 Protein Homology CDS 111943 113487 . - 0 ID=cds-WP_038824685.1;Parent=gene-AD853_RS09315;Dbxref=GenBank:WP_038824685.1;Name=WP_038824685.1;Ontology_term=GO:0033103,GO:0033104;gbkey=CDS;gene=tssC;go_component=type VI protein secretion system complex|0033104||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012104626.1;locus_tag=AD853_RS09315;product=type VI secretion system contractile sheath large subunit;protein_id=WP_038824685.1;transl_table=11 NZ_CPUY01000008.1 RefSeq gene 113530 114030 . - . ID=gene-AD853_RS09320;Name=tssB;gbkey=Gene;gene=tssB;gene_biotype=protein_coding;locus_tag=AD853_RS09320;old_locus_tag=ERS008462_01894 NZ_CPUY01000008.1 Protein Homology CDS 113530 114030 . - 0 ID=cds-WP_038826731.1;Parent=gene-AD853_RS09320;Dbxref=GenBank:WP_038826731.1;Name=WP_038826731.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssB;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002213014.1;locus_tag=AD853_RS09320;product=type VI secretion system contractile sheath small subunit;protein_id=WP_038826731.1;transl_table=11 NZ_CPUY01000008.1 RefSeq pseudogene 115019 115866 . - . ID=gene-AD853_RS09330;Name=AD853_RS09330;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD853_RS09330;pseudo=true NZ_CPUY01000008.1 Protein Homology CDS 115019 115866 . - 0 ID=cds-AD853_RS09330;Parent=gene-AD853_RS09330;Note=frameshifted;Ontology_term=GO:0006633,GO:0004314,GO:0016740;gbkey=CDS;go_function=[acyl-carrier-protein] S-malonyltransferase activity|0004314||IEA,transferase activity|0016740||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002213016.1;locus_tag=AD853_RS09330;product=ACP S-malonyltransferase;pseudo=true;transl_table=11 NZ_CPUY01000008.1 RefSeq gene 115965 116213 . - . ID=gene-AD853_RS09335;Name=AD853_RS09335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS09335;old_locus_tag=ERS008462_01898 NZ_CPUY01000008.1 Protein Homology CDS 115965 116213 . - 0 ID=cds-WP_002213017.1;Parent=gene-AD853_RS09335;Dbxref=GenBank:WP_002213017.1;Name=WP_002213017.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002213017.1;locus_tag=AD853_RS09335;product=phosphopantetheine-binding protein;protein_id=WP_002213017.1;transl_table=11 NZ_CPUY01000008.1 RefSeq gene 116251 116691 . - . ID=gene-AD853_RS09340;Name=AD853_RS09340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS09340;old_locus_tag=ERS008462_01899 NZ_CPUY01000008.1 Protein Homology CDS 116251 116691 . - 0 ID=cds-WP_002228570.1;Parent=gene-AD853_RS09340;Dbxref=GenBank:WP_002228570.1;Name=WP_002228570.1;Ontology_term=GO:0008289;gbkey=CDS;go_function=lipid binding|0008289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002228570.1;locus_tag=AD853_RS09340;product=lipocalin-like domain-containing protein;protein_id=WP_002228570.1;transl_table=11 NZ_CPUY01000008.1 RefSeq gene 116778 117566 . - . ID=gene-AD853_RS09345;Name=AD853_RS09345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS09345;old_locus_tag=ERS008462_01900 NZ_CPUY01000008.1 Protein Homology CDS 116778 117566 . - 0 ID=cds-WP_002213024.1;Parent=gene-AD853_RS09345;Dbxref=GenBank:WP_002213024.1;Name=WP_002213024.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105361.1;locus_tag=AD853_RS09345;product=SDR family oxidoreductase;protein_id=WP_002213024.1;transl_table=11 NZ_CPUY01000008.1 RefSeq gene 117569 118321 . - . ID=gene-AD853_RS09350;Name=AD853_RS09350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS09350;old_locus_tag=ERS008462_01901 NZ_CPUY01000008.1 Protein Homology CDS 117569 118321 . - 0 ID=cds-WP_002213025.1;Parent=gene-AD853_RS09350;Dbxref=GenBank:WP_002213025.1;Name=WP_002213025.1;Ontology_term=GO:0006633,GO:0016746;gbkey=CDS;go_function=acyltransferase activity|0016746||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012229846.1;locus_tag=AD853_RS09350;product=polyketide synthase;protein_id=WP_002213025.1;transl_table=11 NZ_CPUY01000008.1 RefSeq gene 118323 119042 . - . ID=gene-AD853_RS09355;Name=AD853_RS09355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS09355;old_locus_tag=ERS008462_01902 NZ_CPUY01000008.1 Protein Homology CDS 118323 119042 . - 0 ID=cds-WP_002213026.1;Parent=gene-AD853_RS09355;Dbxref=GenBank:WP_002213026.1;Name=WP_002213026.1;Ontology_term=GO:0016829;gbkey=CDS;go_function=lyase activity|0016829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014462326.1;locus_tag=AD853_RS09355;product=enoyl-CoA hydratase/isomerase family protein;protein_id=WP_002213026.1;transl_table=11 NZ_CPUY01000008.1 RefSeq gene 119035 120273 . - . ID=gene-AD853_RS09360;Name=AD853_RS09360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS09360;old_locus_tag=ERS008462_01903 NZ_CPUY01000008.1 Protein Homology CDS 119035 120273 . - 0 ID=cds-WP_002213028.1;Parent=gene-AD853_RS09360;Dbxref=GenBank:WP_002213028.1;Name=WP_002213028.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002213028.1;locus_tag=AD853_RS09360;product=hydroxymethylglutaryl-CoA synthase family protein;protein_id=WP_002213028.1;transl_table=11 NZ_CPUY01000008.1 RefSeq gene 120289 121026 . - . ID=gene-AD853_RS09365;Name=AD853_RS09365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS09365;old_locus_tag=ERS008462_01904 NZ_CPUY01000008.1 Protein Homology CDS 120289 121026 . - 0 ID=cds-WP_012105362.1;Parent=gene-AD853_RS09365;Dbxref=GenBank:WP_012105362.1;Name=WP_012105362.1;Ontology_term=GO:0016491,GO:0070403;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105362.1;locus_tag=AD853_RS09365;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_012105362.1;transl_table=11 NZ_CPUY01000008.1 RefSeq gene 121028 122311 . - . ID=gene-AD853_RS09370;Name=AD853_RS09370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS09370;old_locus_tag=ERS008462_01905 NZ_CPUY01000008.1 Protein Homology CDS 121028 122311 . - 0 ID=cds-WP_038823901.1;Parent=gene-AD853_RS09370;Dbxref=GenBank:WP_038823901.1;Name=WP_038823901.1;Ontology_term=GO:0006633,GO:0004315;gbkey=CDS;go_function=3-oxoacyl-[acyl-carrier-protein] synthase activity|0004315||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002213032.1;locus_tag=AD853_RS09370;product=beta-ketoacyl-[acyl-carrier-protein] synthase family protein;protein_id=WP_038823901.1;transl_table=11 NZ_CPUY01000008.1 RefSeq gene 122301 122825 . - . ID=gene-AD853_RS09375;Name=AD853_RS09375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS09375;old_locus_tag=ERS008462_01906 NZ_CPUY01000008.1 Protein Homology CDS 122301 122825 . - 0 ID=cds-WP_038823902.1;Parent=gene-AD853_RS09375;Dbxref=GenBank:WP_038823902.1;Name=WP_038823902.1;Ontology_term=GO:0006633,GO:0016836;gbkey=CDS;go_function=hydro-lyase activity|0016836||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002213034.1;locus_tag=AD853_RS09375;product=3-hydroxyacyl-ACP dehydratase FabZ family protein;protein_id=WP_038823902.1;transl_table=11 NZ_CPUY01000008.1 RefSeq gene 123089 123307 . - . ID=gene-AD853_RS09380;Name=AD853_RS09380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS09380;old_locus_tag=ERS008462_01907 NZ_CPUY01000008.1 Protein Homology CDS 123089 123307 . - 0 ID=cds-WP_002213036.1;Parent=gene-AD853_RS09380;Dbxref=GenBank:WP_002213036.1;Name=WP_002213036.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002213036.1;locus_tag=AD853_RS09380;product=hypothetical protein;protein_id=WP_002213036.1;transl_table=11 NZ_CPUY01000008.1 RefSeq gene 123947 124693 . + . ID=gene-AD853_RS09385;Name=AD853_RS09385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS09385;old_locus_tag=ERS008462_01908 NZ_CPUY01000008.1 Protein Homology CDS 123947 124693 . + 0 ID=cds-WP_002213038.1;Parent=gene-AD853_RS09385;Dbxref=GenBank:WP_002213038.1;Name=WP_002213038.1;Ontology_term=GO:0016491,GO:0070403;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002402194.1;locus_tag=AD853_RS09385;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_002213038.1;transl_table=11 NZ_CPUY01000008.1 RefSeq gene 124847 127264 . + . ID=gene-AD853_RS09390;Name=AD853_RS09390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS09390;old_locus_tag=ERS008462_01909 NZ_CPUY01000008.1 Protein Homology CDS 124847 127264 . + 0 ID=cds-WP_038399998.1;Parent=gene-AD853_RS09390;Dbxref=GenBank:WP_038399998.1;Name=WP_038399998.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015683670.1;locus_tag=AD853_RS09390;product=GNAT family N-acetyltransferase;protein_id=WP_038399998.1;transl_table=11 NZ_CPUY01000008.1 RefSeq pseudogene 127395 129184 . - . ID=gene-AD853_RS21560;Name=AD853_RS21560;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD853_RS21560;partial=true;pseudo=true;start_range=.,127395 NZ_CPUY01000008.1 Protein Homology CDS 127395 129184 . - 0 ID=cds-AD853_RS21560;Parent=gene-AD853_RS21560;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_111779455.1;locus_tag=AD853_RS21560;partial=true;product=DUF4765 family protein;pseudo=true;start_range=.,127395;transl_table=11 NZ_CPUY01000008.1 RefSeq pseudogene 129589 130082 . - . ID=gene-AD853_RS20535;Name=AD853_RS20535;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD853_RS20535;partial=true;pseudo=true;start_range=.,129589 NZ_CPUY01000008.1 Protein Homology CDS 129589 130082 . - 0 ID=cds-AD853_RS20535;Parent=gene-AD853_RS20535;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013183171.1;locus_tag=AD853_RS20535;partial=true;product=IS6 family transposase;pseudo=true;start_range=.,129589;transl_table=11 NZ_CPUY01000008.1 RefSeq gene 130263 130350 . - . ID=gene-AD853_RS09415;Name=AD853_RS09415;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD853_RS09415;old_locus_tag=ERS008462_01914 NZ_CPUY01000008.1 tRNAscan-SE tRNA 130263 130350 . - . ID=rna-AD853_RS09415;Parent=gene-AD853_RS09415;anticodon=(pos:complement(130314..130316));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD853_RS09415;product=tRNA-Ser NZ_CPUY01000008.1 tRNAscan-SE exon 130263 130350 . - . ID=exon-AD853_RS09415-1;Parent=rna-AD853_RS09415;anticodon=(pos:complement(130314..130316));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD853_RS09415;product=tRNA-Ser NZ_CPUY01000008.1 RefSeq gene 130591 130920 . + . ID=gene-AD853_RS09420;Name=tusE;gbkey=Gene;gene=tusE;gene_biotype=protein_coding;locus_tag=AD853_RS09420;old_locus_tag=ERS008462_01915 NZ_CPUY01000008.1 Protein Homology CDS 130591 130920 . + 0 ID=cds-WP_002213046.1;Parent=gene-AD853_RS09420;Dbxref=GenBank:WP_002213046.1;Name=WP_002213046.1;gbkey=CDS;gene=tusE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005970590.1;locus_tag=AD853_RS09420;product=sulfurtransferase TusE;protein_id=WP_002213046.1;transl_table=11 NZ_CPUY01000008.1 RefSeq gene 130972 131250 . - . ID=gene-AD853_RS09425;Name=yccX;gbkey=Gene;gene=yccX;gene_biotype=protein_coding;locus_tag=AD853_RS09425;old_locus_tag=ERS008462_01916 NZ_CPUY01000008.1 Protein Homology CDS 130972 131250 . - 0 ID=cds-WP_002213049.1;Parent=gene-AD853_RS09425;Dbxref=GenBank:WP_002213049.1;Name=WP_002213049.1;Ontology_term=GO:0003998;gbkey=CDS;gene=yccX;go_function=acylphosphatase activity|0003998||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002213049.1;locus_tag=AD853_RS09425;product=acylphosphatase;protein_id=WP_002213049.1;transl_table=11 NZ_CPUY01000008.1 RefSeq gene 131344 132534 . + . ID=gene-AD853_RS09430;Name=rlmI;gbkey=Gene;gene=rlmI;gene_biotype=protein_coding;locus_tag=AD853_RS09430;old_locus_tag=ERS008462_01917 NZ_CPUY01000008.1 Protein Homology CDS 131344 132534 . + 0 ID=cds-WP_002213052.1;Parent=gene-AD853_RS09430;Dbxref=GenBank:WP_002213052.1;Name=WP_002213052.1;Ontology_term=GO:0003723,GO:0008649;gbkey=CDS;gene=rlmI;go_function=RNA binding|0003723||IEA,rRNA methyltransferase activity|0008649||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006320713.1;locus_tag=AD853_RS09430;product=23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI;protein_id=WP_002213052.1;transl_table=11 NZ_CPUY01000008.1 RefSeq gene 132595 132912 . + . ID=gene-AD853_RS09435;Name=hspQ;gbkey=Gene;gene=hspQ;gene_biotype=protein_coding;locus_tag=AD853_RS09435;old_locus_tag=ERS008462_01918 NZ_CPUY01000008.1 Protein Homology CDS 132595 132912 . + 0 ID=cds-WP_002213054.1;Parent=gene-AD853_RS09435;Dbxref=GenBank:WP_002213054.1;Name=WP_002213054.1;gbkey=CDS;gene=hspQ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226173.1;locus_tag=AD853_RS09435;product=heat shock protein HspQ;protein_id=WP_002213054.1;transl_table=11 NZ_CPUY01000008.1 RefSeq gene 133021 133437 . - . ID=gene-AD853_RS09440;Name=AD853_RS09440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS09440;old_locus_tag=ERS008462_01919 NZ_CPUY01000008.1 Protein Homology CDS 133021 133437 . - 0 ID=cds-WP_012105366.1;Parent=gene-AD853_RS09440;Dbxref=GenBank:WP_012105366.1;Name=WP_012105366.1;Ontology_term=GO:0120225;gbkey=CDS;go_function=coenzyme A binding|0120225||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004700098.1;locus_tag=AD853_RS09440;product=CoA-binding protein;protein_id=WP_012105366.1;transl_table=11 NZ_CPUY01000008.1 RefSeq gene 133753 134433 . + . ID=gene-AD853_RS09445;Name=AD853_RS09445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS09445;old_locus_tag=ERS008462_01920 NZ_CPUY01000008.1 Protein Homology CDS 133753 134433 . + 0 ID=cds-WP_002213058.1;Parent=gene-AD853_RS09445;Dbxref=GenBank:WP_002213058.1;Name=WP_002213058.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002213058.1;locus_tag=AD853_RS09445;product=DUF2057 family protein;protein_id=WP_002213058.1;transl_table=11 NZ_CPUY01000008.1 RefSeq gene 134612 135076 . + . ID=gene-AD853_RS09450;Name=AD853_RS09450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS09450;old_locus_tag=ERS008462_01921 NZ_CPUY01000008.1 Protein Homology CDS 134612 135076 . + 0 ID=cds-WP_002213060.1;Parent=gene-AD853_RS09450;Dbxref=GenBank:WP_002213060.1;Name=WP_002213060.1;Ontology_term=GO:0019242,GO:0008929;gbkey=CDS;go_function=methylglyoxal synthase activity|0008929||IEA;go_process=methylglyoxal biosynthetic process|0019242||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002213060.1;locus_tag=AD853_RS09450;product=methylglyoxal synthase;protein_id=WP_002213060.1;transl_table=11 NZ_CPUY01000008.1 RefSeq gene 135137 137191 . - . ID=gene-AD853_RS09455;Name=helD;gbkey=Gene;gene=helD;gene_biotype=protein_coding;locus_tag=AD853_RS09455;old_locus_tag=ERS008462_01922 NZ_CPUY01000008.1 Protein Homology CDS 135137 137191 . - 0 ID=cds-WP_011192072.1;Parent=gene-AD853_RS09455;Dbxref=GenBank:WP_011192072.1;Name=WP_011192072.1;Ontology_term=GO:0003677,GO:0003678,GO:0005524;gbkey=CDS;gene=helD;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005279909.1;locus_tag=AD853_RS09455;product=DNA helicase IV;protein_id=WP_011192072.1;transl_table=11 NZ_CPUY01000008.1 RefSeq gene 137385 137831 . + . ID=gene-AD853_RS09460;Name=AD853_RS09460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS09460;old_locus_tag=ERS008462_01923 NZ_CPUY01000008.1 Protein Homology CDS 137385 137831 . + 0 ID=cds-WP_002213062.1;Parent=gene-AD853_RS09460;Dbxref=GenBank:WP_002213062.1;Name=WP_002213062.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002213062.1;locus_tag=AD853_RS09460;product=YccF domain-containing protein;protein_id=WP_002213062.1;transl_table=11 NZ_CPUY01000008.1 RefSeq gene 137861 139999 . + . ID=gene-AD853_RS09465;Name=yccS;gbkey=Gene;gene=yccS;gene_biotype=protein_coding;locus_tag=AD853_RS09465;old_locus_tag=ERS008462_01924 NZ_CPUY01000008.1 Protein Homology CDS 137861 139999 . + 0 ID=cds-WP_038823799.1;Parent=gene-AD853_RS09465;Dbxref=GenBank:WP_038823799.1;Name=WP_038823799.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yccS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192070.1;locus_tag=AD853_RS09465;product=YccS family putative transporter;protein_id=WP_038823799.1;transl_table=11 NZ_CPUY01000008.1 RefSeq gene 140101 140736 . - . ID=gene-AD853_RS09470;Name=AD853_RS09470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS09470;old_locus_tag=ERS008462_01925 NZ_CPUY01000008.1 Protein Homology CDS 140101 140736 . - 0 ID=cds-WP_038823800.1;Parent=gene-AD853_RS09470;Dbxref=GenBank:WP_038823800.1;Name=WP_038823800.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002213064.1;locus_tag=AD853_RS09470;product=TfoX/Sxy family DNA transformation protein;protein_id=WP_038823800.1;transl_table=11 NZ_CPUY01000008.1 RefSeq gene 140965 141471 . + . ID=gene-AD853_RS09475;Name=sulA;gbkey=Gene;gene=sulA;gene_biotype=protein_coding;locus_tag=AD853_RS09475;old_locus_tag=ERS008462_01926 NZ_CPUY01000008.1 Protein Homology CDS 140965 141471 . + 0 ID=cds-WP_011192069.1;Parent=gene-AD853_RS09475;Dbxref=GenBank:WP_011192069.1;Name=WP_011192069.1;Ontology_term=GO:0009432,GO:0051782,GO:0005515;gbkey=CDS;gene=sulA;go_function=protein binding|0005515||IEA;go_process=SOS response|0009432||IEA,negative regulation of cell division|0051782||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192069.1;locus_tag=AD853_RS09475;product=SOS-induced cell division inhibitor SulA;protein_id=WP_011192069.1;transl_table=11 NZ_CPUY01000008.1 RefSeq gene 141829 142890 . + . ID=gene-AD853_RS09480;Name=ompA;gbkey=Gene;gene=ompA;gene_biotype=protein_coding;locus_tag=AD853_RS09480;old_locus_tag=ERS008462_01927 NZ_CPUY01000008.1 Protein Homology CDS 141829 142890 . + 0 ID=cds-WP_002213066.1;Parent=gene-AD853_RS09480;Dbxref=GenBank:WP_002213066.1;Name=WP_002213066.1;Ontology_term=GO:0015288;gbkey=CDS;gene=ompA;go_function=porin activity|0015288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002213066.1;locus_tag=AD853_RS09480;product=porin OmpA;protein_id=WP_002213066.1;transl_table=11 NZ_CPUY01000008.1 RefSeq gene 142996 143451 . - . ID=gene-AD853_RS09485;Name=matP;gbkey=Gene;gene=matP;gene_biotype=protein_coding;locus_tag=AD853_RS09485;old_locus_tag=ERS008462_01928 NZ_CPUY01000008.1 Protein Homology CDS 142996 143451 . - 0 ID=cds-WP_002226586.1;Parent=gene-AD853_RS09485;Dbxref=GenBank:WP_002226586.1;Name=WP_002226586.1;Ontology_term=GO:0006355,GO:0043565;gbkey=CDS;gene=matP;go_function=sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002226586.1;locus_tag=AD853_RS09485;product=macrodomain Ter protein MatP;protein_id=WP_002226586.1;transl_table=11 NZ_CPUY01000008.1 RefSeq gene 143662 145413 . + . ID=gene-AD853_RS09490;Name=AD853_RS09490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS09490;old_locus_tag=ERS008462_01929 NZ_CPUY01000008.1 Protein Homology CDS 143662 145413 . + 0 ID=cds-WP_002224683.1;Parent=gene-AD853_RS09490;Dbxref=GenBank:WP_002224683.1;Name=WP_002224683.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005184605.1;locus_tag=AD853_RS09490;product=AAA family ATPase;protein_id=WP_002224683.1;transl_table=11 NZ_CPUY01000008.1 RefSeq gene 145482 146000 . + . ID=gene-AD853_RS09495;Name=fabA;gbkey=Gene;gene=fabA;gene_biotype=protein_coding;locus_tag=AD853_RS09495;old_locus_tag=ERS008462_01930 NZ_CPUY01000008.1 Protein Homology CDS 145482 146000 . + 0 ID=cds-WP_002220006.1;Parent=gene-AD853_RS09495;Dbxref=GenBank:WP_002220006.1;Name=WP_002220006.1;Ontology_term=GO:0006633,GO:0019171;gbkey=CDS;gene=fabA;go_function=(3R)-hydroxyacyl-[acyl-carrier-protein] dehydratase activity|0019171||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013650072.1;locus_tag=AD853_RS09495;product=bifunctional 3-hydroxydecanoyl-ACP dehydratase/trans-2-decenoyl-ACP isomerase;protein_id=WP_002220006.1;transl_table=11 NZ_CPUY01000008.1 RefSeq gene 146266 146454 . - . ID=gene-AD853_RS09500;Name=AD853_RS09500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS09500;old_locus_tag=ERS008462_01931 NZ_CPUY01000008.1 Protein Homology CDS 146266 146454 . - 0 ID=cds-WP_002211286.1;Parent=gene-AD853_RS09500;Dbxref=GenBank:WP_002211286.1;Name=WP_002211286.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211286.1;locus_tag=AD853_RS09500;product=hypothetical protein;protein_id=WP_002211286.1;transl_table=11 NZ_CPUY01000008.1 RefSeq gene 146700 147974 . + . ID=gene-AD853_RS09505;Name=fabF;gbkey=Gene;gene=fabF;gene_biotype=protein_coding;locus_tag=AD853_RS09505;old_locus_tag=ERS008462_01932 NZ_CPUY01000008.1 Protein Homology CDS 146700 147974 . + 0 ID=cds-WP_011192068.1;Parent=gene-AD853_RS09505;Dbxref=GenBank:WP_011192068.1;Name=WP_011192068.1;Ontology_term=GO:0006633,GO:0004315;gbkey=CDS;gene=fabF;go_function=3-oxoacyl-[acyl-carrier-protein] synthase activity|0004315||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105370.1;locus_tag=AD853_RS09505;product=beta-ketoacyl-ACP synthase II;protein_id=WP_011192068.1;transl_table=11 NZ_CPUY01000008.1 RefSeq gene 148036 148203 . - . ID=gene-AD853_RS09510;Name=rmf;gbkey=Gene;gene=rmf;gene_biotype=protein_coding;locus_tag=AD853_RS09510;old_locus_tag=ERS008462_01933 NZ_CPUY01000008.1 Protein Homology CDS 148036 148203 . - 0 ID=cds-WP_038823803.1;Parent=gene-AD853_RS09510;Dbxref=GenBank:WP_038823803.1;Name=WP_038823803.1;Ontology_term=GO:0141014,GO:0043022;gbkey=CDS;gene=rmf;go_function=ribosome binding|0043022||IEA;go_process=ribosome hibernation|0141014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013574871.1;locus_tag=AD853_RS09510;product=ribosome modulation factor;protein_id=WP_038823803.1;transl_table=11 NZ_CPUY01000008.1 RefSeq gene 148473 149051 . - . ID=gene-AD853_RS09520;Name=pqiC;gbkey=Gene;gene=pqiC;gene_biotype=protein_coding;locus_tag=AD853_RS09520;old_locus_tag=ERS008462_01934 NZ_CPUY01000008.1 Protein Homology CDS 148473 149051 . - 0 ID=cds-WP_038823804.1;Parent=gene-AD853_RS09520;Dbxref=GenBank:WP_038823804.1;Name=WP_038823804.1;gbkey=CDS;gene=pqiC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211289.1;locus_tag=AD853_RS09520;product=membrane integrity-associated transporter subunit PqiC;protein_id=WP_038823804.1;transl_table=11 NZ_CPUY01000008.1 RefSeq gene 149048 150700 . - . ID=gene-AD853_RS09525;Name=pqiB;gbkey=Gene;gene=pqiB;gene_biotype=protein_coding;locus_tag=AD853_RS09525;old_locus_tag=ERS008462_01935 NZ_CPUY01000008.1 Protein Homology CDS 149048 150700 . - 0 ID=cds-WP_002211290.1;Parent=gene-AD853_RS09525;Dbxref=GenBank:WP_002211290.1;Name=WP_002211290.1;gbkey=CDS;gene=pqiB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013650076.1;locus_tag=AD853_RS09525;product=intermembrane transport protein PqiB;protein_id=WP_002211290.1;transl_table=11 NZ_CPUY01000008.1 RefSeq gene 150687 151973 . - . ID=gene-AD853_RS09530;Name=pqiA;gbkey=Gene;gene=pqiA;gene_biotype=protein_coding;locus_tag=AD853_RS09530;old_locus_tag=ERS008462_01936 NZ_CPUY01000008.1 Protein Homology CDS 150687 151973 . - 0 ID=cds-WP_002211291.1;Parent=gene-AD853_RS09530;Dbxref=GenBank:WP_002211291.1;Name=WP_002211291.1;gbkey=CDS;gene=pqiA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011906333.1;locus_tag=AD853_RS09530;product=membrane integrity-associated transporter subunit PqiA;protein_id=WP_002211291.1;transl_table=11 NZ_CPUY01000008.1 RefSeq gene 152102 154015 . - . ID=gene-AD853_RS09535;Name=AD853_RS09535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS09535;old_locus_tag=ERS008462_01937 NZ_CPUY01000008.1 Protein Homology CDS 152102 154015 . - 0 ID=cds-WP_038823806.1;Parent=gene-AD853_RS09535;Dbxref=GenBank:WP_038823806.1;Name=WP_038823806.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211292.1;locus_tag=AD853_RS09535;product=ABC transporter ATP-binding protein;protein_id=WP_038823806.1;transl_table=11 NZ_CPUY01000008.1 RefSeq gene 154021 156141 . - . ID=gene-AD853_RS09540;Name=rlmKL;gbkey=Gene;gene=rlmKL;gene_biotype=protein_coding;locus_tag=AD853_RS09540;old_locus_tag=ERS008462_01938 NZ_CPUY01000008.1 Protein Homology CDS 154021 156141 . - 0 ID=cds-WP_038823807.1;Parent=gene-AD853_RS09540;Dbxref=GenBank:WP_038823807.1;Name=WP_038823807.1;Ontology_term=GO:0031167,GO:0003723,GO:0008990;gbkey=CDS;gene=rlmKL;go_function=RNA binding|0003723||IEA,rRNA (guanine-N2-)-methyltransferase activity|0008990||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211293.1;locus_tag=AD853_RS09540;product=bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL;protein_id=WP_038823807.1;transl_table=11 NZ_CPUY01000008.1 RefSeq gene 156241 157353 . + . ID=gene-AD853_RS09545;Name=AD853_RS09545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS09545;old_locus_tag=ERS008462_01939 NZ_CPUY01000008.1 Protein Homology CDS 156241 157353 . + 0 ID=cds-WP_072080803.1;Parent=gene-AD853_RS09545;Dbxref=GenBank:WP_072080803.1;Name=WP_072080803.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004709972.1;locus_tag=AD853_RS09545;product=YcbX family protein;protein_id=WP_072080803.1;transl_table=11 NZ_CPUY01000008.1 RefSeq gene 157379 157930 . - . ID=gene-AD853_RS09550;Name=AD853_RS09550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS09550;old_locus_tag=ERS008462_01940 NZ_CPUY01000008.1 Protein Homology CDS 157379 157930 . - 0 ID=cds-WP_011192064.1;Parent=gene-AD853_RS09550;Dbxref=GenBank:WP_011192064.1;Name=WP_011192064.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211295.1;locus_tag=AD853_RS09550;product=cell division protein ZapC;protein_id=WP_011192064.1;transl_table=11 NZ_CPUY01000008.1 RefSeq gene 158113 159123 . - . ID=gene-AD853_RS09555;Name=pyrD;gbkey=Gene;gene=pyrD;gene_biotype=protein_coding;locus_tag=AD853_RS09555;old_locus_tag=ERS008462_01941 NZ_CPUY01000008.1 Protein Homology CDS 158113 159123 . - 0 ID=cds-WP_038823808.1;Parent=gene-AD853_RS09555;Dbxref=GenBank:WP_038823808.1;Name=WP_038823808.1;Ontology_term=GO:0006222,GO:0004152,GO:0016020;gbkey=CDS;gene=pyrD;go_component=membrane|0016020||IEA;go_function=dihydroorotate dehydrogenase activity|0004152||IEA;go_process=UMP biosynthetic process|0006222||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015840036.1;locus_tag=AD853_RS09555;product=quinone-dependent dihydroorotate dehydrogenase;protein_id=WP_038823808.1;transl_table=11 NZ_CPUY01000008.1 RefSeq gene 159723 162338 . - . ID=gene-AD853_RS09560;Name=pepN;gbkey=Gene;gene=pepN;gene_biotype=protein_coding;locus_tag=AD853_RS09560;old_locus_tag=ERS008462_01942 NZ_CPUY01000008.1 Protein Homology CDS 159723 162338 . - 0 ID=cds-WP_012413610.1;Parent=gene-AD853_RS09560;Dbxref=GenBank:WP_012413610.1;Name=WP_012413610.1;Ontology_term=GO:0006508,GO:0004177,GO:0008237,GO:0008270;gbkey=CDS;gene=pepN;go_function=aminopeptidase activity|0004177||IEA,metallopeptidase activity|0008237||IEA,zinc ion binding|0008270||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002220013.1;locus_tag=AD853_RS09560;product=aminopeptidase N;protein_id=WP_012413610.1;transl_table=11 NZ_CPUY01000008.1 RefSeq gene 163054 164259 . + . ID=gene-AD853_RS09565;Name=pncB;gbkey=Gene;gene=pncB;gene_biotype=protein_coding;locus_tag=AD853_RS09565;old_locus_tag=ERS008462_01943 NZ_CPUY01000008.1 Protein Homology CDS 163054 164259 . + 0 ID=cds-WP_002228013.1;Parent=gene-AD853_RS09565;Dbxref=GenBank:WP_002228013.1;Name=WP_002228013.1;Ontology_term=GO:0009435,GO:0004516;gbkey=CDS;gene=pncB;go_function=nicotinate phosphoribosyltransferase activity|0004516||IEA;go_process=NAD+ biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011816044.1;locus_tag=AD853_RS09565;product=nicotinate phosphoribosyltransferase;protein_id=WP_002228013.1;transl_table=11 NZ_CPUY01000008.1 RefSeq gene 164734 166134 . + . ID=gene-AD853_RS09570;Name=asnS;gbkey=Gene;gene=asnS;gene_biotype=protein_coding;locus_tag=AD853_RS09570;old_locus_tag=ERS008462_01944 NZ_CPUY01000008.1 Protein Homology CDS 164734 166134 . + 0 ID=cds-WP_002211301.1;Parent=gene-AD853_RS09570;Dbxref=GenBank:WP_002211301.1;Name=WP_002211301.1;Ontology_term=GO:0006421,GO:0004816,GO:0005524;gbkey=CDS;gene=asnS;go_function=asparagine-tRNA ligase activity|0004816||IEA,ATP binding|0005524||IEA;go_process=asparaginyl-tRNA aminoacylation|0006421||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123540.1;locus_tag=AD853_RS09570;product=asparagine--tRNA ligase;protein_id=WP_002211301.1;transl_table=11 NZ_CPUY01000008.1 RefSeq gene 166435 167514 . + . ID=gene-AD853_RS09575;Name=ompF;gbkey=Gene;gene=ompF;gene_biotype=protein_coding;locus_tag=AD853_RS09575;old_locus_tag=ERS008462_01945 NZ_CPUY01000008.1 Protein Homology CDS 166435 167514 . + 0 ID=cds-WP_038824054.1;Parent=gene-AD853_RS09575;Dbxref=GenBank:WP_038824054.1;Name=WP_038824054.1;gbkey=CDS;gene=ompF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_119863614.1;locus_tag=AD853_RS09575;product=porin OmpF;protein_id=WP_038824054.1;transl_table=11 NZ_CPUY01000008.1 RefSeq gene 167771 168961 . + . ID=gene-AD853_RS09580;Name=AD853_RS09580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS09580;old_locus_tag=ERS008462_01946 NZ_CPUY01000008.1 Protein Homology CDS 167771 168961 . + 0 ID=cds-WP_002211303.1;Parent=gene-AD853_RS09580;Dbxref=GenBank:WP_002211303.1;Name=WP_002211303.1;Ontology_term=GO:0008483,GO:0030170;gbkey=CDS;go_function=transaminase activity|0008483||IEA,pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009653304.1;locus_tag=AD853_RS09580;product=amino acid aminotransferase;protein_id=WP_002211303.1;transl_table=11 NZ_CPUY01000008.1 RefSeq gene 169045 169680 . - . ID=gene-AD853_RS09585;Name=AD853_RS09585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS09585;old_locus_tag=ERS008462_01947 NZ_CPUY01000008.1 Protein Homology CDS 169045 169680 . - 0 ID=cds-WP_038824048.1;Parent=gene-AD853_RS09585;Dbxref=GenBank:WP_038824048.1;Name=WP_038824048.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004717398.1;locus_tag=AD853_RS09585;product=MBL fold metallo-hydrolase;protein_id=WP_038824048.1;transl_table=11 NZ_CPUY01000008.1 RefSeq gene 169741 170289 . - . ID=gene-AD853_RS09590;Name=AD853_RS09590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS09590;old_locus_tag=ERS008462_01948 NZ_CPUY01000008.1 Protein Homology CDS 169741 170289 . - 0 ID=cds-WP_002211305.1;Parent=gene-AD853_RS09590;Dbxref=GenBank:WP_002211305.1;Name=WP_002211305.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211305.1;locus_tag=AD853_RS09590;product=YcbK family protein;protein_id=WP_002211305.1;transl_table=11 NZ_CPUY01000008.1 RefSeq gene 170513 172369 . - . ID=gene-AD853_RS09595;Name=ldtD;gbkey=Gene;gene=ldtD;gene_biotype=protein_coding;locus_tag=AD853_RS09595;old_locus_tag=ERS008462_01949 NZ_CPUY01000008.1 Protein Homology CDS 170513 172369 . - 0 ID=cds-WP_038824049.1;Parent=gene-AD853_RS09595;Dbxref=GenBank:WP_038824049.1;Name=WP_038824049.1;Ontology_term=GO:0016740;gbkey=CDS;gene=ldtD;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011906337.1;locus_tag=AD853_RS09595;product=L%2CD-transpeptidase;protein_id=WP_038824049.1;transl_table=11 NZ_CPUY01000008.1 RefSeq gene 172617 177074 . - . ID=gene-AD853_RS09600;Name=mukB;gbkey=Gene;gene=mukB;gene_biotype=protein_coding;locus_tag=AD853_RS09600;old_locus_tag=ERS008462_01950 NZ_CPUY01000008.1 Protein Homology CDS 172617 177074 . - 0 ID=cds-WP_038824050.1;Parent=gene-AD853_RS09600;Dbxref=GenBank:WP_038824050.1;Name=WP_038824050.1;Ontology_term=GO:0007059,GO:0030261,GO:0003677;gbkey=CDS;gene=mukB;go_function=DNA binding|0003677||IEA;go_process=chromosome segregation|0007059||IEA,chromosome condensation|0030261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016586397.1;locus_tag=AD853_RS09600;product=chromosome partition protein MukB;protein_id=WP_038824050.1;transl_table=11 NZ_CPUY01000008.1 RefSeq gene 177071 177799 . - . ID=gene-AD853_RS09605;Name=mukE;gbkey=Gene;gene=mukE;gene_biotype=protein_coding;locus_tag=AD853_RS09605;old_locus_tag=ERS008462_01951 NZ_CPUY01000008.1 Protein Homology CDS 177071 177799 . - 0 ID=cds-WP_002211309.1;Parent=gene-AD853_RS09605;Dbxref=GenBank:WP_002211309.1;Name=WP_002211309.1;Ontology_term=GO:0007059,GO:0030261;gbkey=CDS;gene=mukE;go_process=chromosome segregation|0007059||IEA,chromosome condensation|0030261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020438800.1;locus_tag=AD853_RS09605;product=chromosome partition protein MukE;protein_id=WP_002211309.1;transl_table=11 NZ_CPUY01000008.1 RefSeq gene 177780 179102 . - . ID=gene-AD853_RS09610;Name=mukF;gbkey=Gene;gene=mukF;gene_biotype=protein_coding;locus_tag=AD853_RS09610;old_locus_tag=ERS008462_01952 NZ_CPUY01000008.1 Protein Homology CDS 177780 179102 . - 0 ID=cds-WP_002211310.1;Parent=gene-AD853_RS09610;Dbxref=GenBank:WP_002211310.1;Name=WP_002211310.1;Ontology_term=GO:0007059,GO:0005509;gbkey=CDS;gene=mukF;go_function=calcium ion binding|0005509||IEA;go_process=chromosome segregation|0007059||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309032.1;locus_tag=AD853_RS09610;product=chromosome partition protein MukF;protein_id=WP_002211310.1;transl_table=11 NZ_CPUY01000008.1 RefSeq gene 179099 179884 . - . ID=gene-AD853_RS09615;Name=cmoM;gbkey=Gene;gene=cmoM;gene_biotype=protein_coding;locus_tag=AD853_RS09615;old_locus_tag=ERS008462_01953 NZ_CPUY01000008.1 Protein Homology CDS 179099 179884 . - 0 ID=cds-WP_002211311.1;Parent=gene-AD853_RS09615;Dbxref=GenBank:WP_002211311.1;Name=WP_002211311.1;gbkey=CDS;gene=cmoM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019079869.1;locus_tag=AD853_RS09615;product=tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM;protein_id=WP_002211311.1;transl_table=11 NZ_CPUY01000008.1 RefSeq gene 179938 180282 . + . ID=gene-AD853_RS21820;Name=AD853_RS21820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS21820 NZ_CPUY01000008.1 GeneMarkS-2+ CDS 179938 180282 . + 0 ID=cds-WP_162769783.1;Parent=gene-AD853_RS21820;Dbxref=GenBank:WP_162769783.1;Name=WP_162769783.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AD853_RS21820;product=hypothetical protein;protein_id=WP_162769783.1;transl_table=11 NZ_CPUY01000008.1 RefSeq pseudogene 180334 180493 . + . ID=gene-AD853_RS22645;Name=AD853_RS22645;end_range=180493,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD853_RS22645;partial=true;pseudo=true;start_range=.,180334 NZ_CPUY01000008.1 Protein Homology CDS 180334 180493 . + 0 ID=cds-AD853_RS22645;Parent=gene-AD853_RS22645;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=180493,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004713314.1;locus_tag=AD853_RS22645;partial=true;product=envelope biogenesis factor ElyC;pseudo=true;start_range=.,180334;transl_table=11 NZ_CPUY01000008.1 RefSeq gene 180640 181533 . - . ID=gene-AD853_RS09625;Name=AD853_RS09625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS09625;old_locus_tag=ERS008462_01954 NZ_CPUY01000008.1 Protein Homology CDS 180640 181533 . - 0 ID=cds-WP_012105378.1;Parent=gene-AD853_RS09625;Dbxref=GenBank:WP_012105378.1;Name=WP_012105378.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004713315.1;locus_tag=AD853_RS09625;product=YcbJ family phosphotransferase;protein_id=WP_012105378.1;transl_table=11 NZ_CPUY01000008.1 RefSeq gene 181896 182648 . - . ID=gene-AD853_RS09630;Name=kdsB;gbkey=Gene;gene=kdsB;gene_biotype=protein_coding;locus_tag=AD853_RS09630;old_locus_tag=ERS008462_01955 NZ_CPUY01000008.1 Protein Homology CDS 181896 182648 . - 0 ID=cds-WP_002211314.1;Parent=gene-AD853_RS09630;Dbxref=GenBank:WP_002211314.1;Name=WP_002211314.1;Ontology_term=GO:0009244,GO:0008690;gbkey=CDS;gene=kdsB;go_function=3-deoxy-manno-octulosonate cytidylyltransferase activity|0008690||IEA;go_process=lipopolysaccharide core region biosynthetic process|0009244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004873757.1;locus_tag=AD853_RS09630;product=3-deoxy-manno-octulosonate cytidylyltransferase;protein_id=WP_002211314.1;transl_table=11 NZ_CPUY01000008.1 RefSeq gene 182645 182827 . - . ID=gene-AD853_RS09635;Name=AD853_RS09635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS09635;old_locus_tag=ERS008462_01956 NZ_CPUY01000008.1 Protein Homology CDS 182645 182827 . - 0 ID=cds-WP_002211315.1;Parent=gene-AD853_RS09635;Dbxref=GenBank:WP_002211315.1;Name=WP_002211315.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004717378.1;locus_tag=AD853_RS09635;product=Trm112 family protein;protein_id=WP_002211315.1;transl_table=11 NZ_CPUY01000008.1 RefSeq gene 183375 183584 . - . ID=gene-AD853_RS09640;Name=AD853_RS09640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS09640;old_locus_tag=ERS008462_01957 NZ_CPUY01000008.1 Protein Homology CDS 183375 183584 . - 0 ID=cds-WP_002211317.1;Parent=gene-AD853_RS09640;Dbxref=GenBank:WP_002211317.1;Name=WP_002211317.1;Ontology_term=GO:0003676;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211317.1;locus_tag=AD853_RS09640;product=cold-shock protein;protein_id=WP_002211317.1;transl_table=11 NZ_CPUY01000008.1 RefSeq gene 184303 185712 . + . ID=gene-AD853_RS09650;Name=hglS;gbkey=Gene;gene=hglS;gene_biotype=protein_coding;gene_synonym=ydcJ;locus_tag=AD853_RS09650;old_locus_tag=ERS008462_01958 NZ_CPUY01000008.1 Protein Homology CDS 184303 185712 . + 0 ID=cds-WP_038824051.1;Parent=gene-AD853_RS09650;Dbxref=GenBank:WP_038824051.1;Name=WP_038824051.1;Ontology_term=GO:0051213;gbkey=CDS;gene=hglS;go_function=dioxygenase activity|0051213||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002216263.1;locus_tag=AD853_RS09650;product=2-oxoadipate dioxygenase/decarboxylase HglS;protein_id=WP_038824051.1;transl_table=11 NZ_CPUY01000008.1 RefSeq gene 185720 186706 . - . ID=gene-AD853_RS09655;Name=lpxK;gbkey=Gene;gene=lpxK;gene_biotype=protein_coding;locus_tag=AD853_RS09655;old_locus_tag=ERS008462_01959 NZ_CPUY01000008.1 Protein Homology CDS 185720 186706 . - 0 ID=cds-WP_002211319.1;Parent=gene-AD853_RS09655;Dbxref=GenBank:WP_002211319.1;Name=WP_002211319.1;Ontology_term=GO:0009245,GO:0009029;gbkey=CDS;gene=lpxK;go_function=lipid-A 4'-kinase activity|0009029||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211319.1;locus_tag=AD853_RS09655;product=tetraacyldisaccharide 4'-kinase;protein_id=WP_002211319.1;transl_table=11 NZ_CPUY01000008.1 RefSeq gene 186703 188451 . - . ID=gene-AD853_RS09660;Name=msbA;gbkey=Gene;gene=msbA;gene_biotype=protein_coding;locus_tag=AD853_RS09660;old_locus_tag=ERS008462_01960 NZ_CPUY01000008.1 Protein Homology CDS 186703 188451 . - 0 ID=cds-WP_038824052.1;Parent=gene-AD853_RS09660;Dbxref=GenBank:WP_038824052.1;Name=WP_038824052.1;Ontology_term=GO:0055085,GO:0005524,GO:0034040,GO:0140359,GO:0016020;gbkey=CDS;gene=msbA;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled lipid transmembrane transporter activity|0034040||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309024.1;locus_tag=AD853_RS09660;product=lipid A ABC transporter ATP-binding protein/permease MsbA;protein_id=WP_038824052.1;transl_table=11 NZ_CPUY01000008.1 RefSeq gene 188487 190778 . - . ID=gene-AD853_RS09665;Name=AD853_RS09665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS09665;old_locus_tag=ERS008462_01961 NZ_CPUY01000008.1 Protein Homology CDS 188487 190778 . - 0 ID=cds-WP_011192058.1;Parent=gene-AD853_RS09665;Dbxref=GenBank:WP_011192058.1;Name=WP_011192058.1;Ontology_term=GO:0030420,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=establishment of competence for transformation|0030420||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011171805.1;locus_tag=AD853_RS09665;product=ComEC family protein;protein_id=WP_011192058.1;transl_table=11 ##sequence-region NZ_CPUY01000009.1 1 174404 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=633 NZ_CPUY01000009.1 RefSeq region 1 174404 . + . ID=NZ_CPUY01000009.1:1..174404;Dbxref=taxon:633;collection-date=1900/2008;country=South Africa;gbkey=Src;genome=genomic;isolation-source=not known;mol_type=genomic DNA;nat-host=pig;serovar=O:3;strain=IP32544 NZ_CPUY01000009.1 RefSeq gene 72 1280 . - . ID=gene-AD853_RS09670;Name=tyrP;gbkey=Gene;gene=tyrP;gene_biotype=protein_coding;locus_tag=AD853_RS09670;old_locus_tag=ERS008462_01962 NZ_CPUY01000009.1 Protein Homology CDS 72 1280 . - 0 ID=cds-WP_002221775.1;Parent=gene-AD853_RS09670;Dbxref=GenBank:WP_002221775.1;Name=WP_002221775.1;Ontology_term=GO:0015801,GO:0015173,GO:0005886;gbkey=CDS;gene=tyrP;go_component=plasma membrane|0005886||IEA;go_function=aromatic amino acid transmembrane transporter activity|0015173||IEA;go_process=aromatic amino acid transport|0015801||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002221775.1;locus_tag=AD853_RS09670;product=tyrosine transporter TyrP;protein_id=WP_002221775.1;transl_table=11 NZ_CPUY01000009.1 RefSeq gene 1899 3092 . + . ID=gene-AD853_RS09675;Name=AD853_RS09675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS09675;old_locus_tag=ERS008462_01963 NZ_CPUY01000009.1 Protein Homology CDS 1899 3092 . + 0 ID=cds-WP_002210814.1;Parent=gene-AD853_RS09675;Dbxref=GenBank:WP_002210814.1;Name=WP_002210814.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011191993.1;locus_tag=AD853_RS09675;product=nicotinamide mononucleotide deamidase-related protein YfaY;protein_id=WP_002210814.1;transl_table=11 NZ_CPUY01000009.1 RefSeq gene 3150 3659 . - . ID=gene-AD853_RS09680;Name=eco;gbkey=Gene;gene=eco;gene_biotype=protein_coding;locus_tag=AD853_RS09680;old_locus_tag=ERS008462_01964 NZ_CPUY01000009.1 Protein Homology CDS 3150 3659 . - 0 ID=cds-WP_002210815.1;Parent=gene-AD853_RS09680;Dbxref=GenBank:WP_002210815.1;Name=WP_002210815.1;Ontology_term=GO:0004867;gbkey=CDS;gene=eco;go_function=serine-type endopeptidase inhibitor activity|0004867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002223516.1;locus_tag=AD853_RS09680;product=serine protease inhibitor ecotin;protein_id=WP_002210815.1;transl_table=11 NZ_CPUY01000009.1 RefSeq gene 3694 3951 . - . ID=gene-AD853_RS09685;Name=yfaE;gbkey=Gene;gene=yfaE;gene_biotype=protein_coding;locus_tag=AD853_RS09685;old_locus_tag=ERS008462_01965 NZ_CPUY01000009.1 Protein Homology CDS 3694 3951 . - 0 ID=cds-WP_002210816.1;Parent=gene-AD853_RS09685;Dbxref=GenBank:WP_002210816.1;Name=WP_002210816.1;Ontology_term=GO:0051537;gbkey=CDS;gene=yfaE;go_function=2 iron%2C 2 sulfur cluster binding|0051537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210816.1;locus_tag=AD853_RS09685;product=class I ribonucleotide reductase maintenance protein YfaE;protein_id=WP_002210816.1;transl_table=11 NZ_CPUY01000009.1 RefSeq gene 3955 5085 . - . ID=gene-AD853_RS09690;Name=nrdB;gbkey=Gene;gene=nrdB;gene_biotype=protein_coding;locus_tag=AD853_RS09690;old_locus_tag=ERS008462_01966 NZ_CPUY01000009.1 Protein Homology CDS 3955 5085 . - 0 ID=cds-WP_002210817.1;Parent=gene-AD853_RS09690;Dbxref=GenBank:WP_002210817.1;Name=WP_002210817.1;Ontology_term=GO:0009263,GO:0016491;gbkey=CDS;gene=nrdB;go_function=oxidoreductase activity|0016491||IEA;go_process=deoxyribonucleotide biosynthetic process|0009263||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461220.1;locus_tag=AD853_RS09690;product=class Ia ribonucleoside-diphosphate reductase subunit beta;protein_id=WP_002210817.1;transl_table=11 NZ_CPUY01000009.1 RefSeq gene 5247 7535 . - . ID=gene-AD853_RS09695;Name=nrdA;gbkey=Gene;gene=nrdA;gene_biotype=protein_coding;locus_tag=AD853_RS09695;old_locus_tag=ERS008462_01967 NZ_CPUY01000009.1 Protein Homology CDS 5247 7535 . - 0 ID=cds-WP_002210818.1;Parent=gene-AD853_RS09695;Dbxref=GenBank:WP_002210818.1;Name=WP_002210818.1;Ontology_term=GO:0006260,GO:0004748,GO:0005524;gbkey=CDS;gene=nrdA;go_function=ribonucleoside-diphosphate reductase activity%2C thioredoxin disulfide as acceptor|0004748||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129392.1;locus_tag=AD853_RS09695;product=class 1a ribonucleoside-diphosphate reductase subunit alpha;protein_id=WP_002210818.1;transl_table=11 NZ_CPUY01000009.1 RefSeq gene 8029 8757 . - . ID=gene-AD853_RS09700;Name=ubiG;gbkey=Gene;gene=ubiG;gene_biotype=protein_coding;locus_tag=AD853_RS09700;old_locus_tag=ERS008462_01968 NZ_CPUY01000009.1 Protein Homology CDS 8029 8757 . - 0 ID=cds-WP_038825149.1;Parent=gene-AD853_RS09700;Dbxref=GenBank:WP_038825149.1;Name=WP_038825149.1;Ontology_term=GO:0006744,GO:0061542;gbkey=CDS;gene=ubiG;go_function=3-demethylubiquinol 3-O-methyltransferase activity|0061542||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210820.1;locus_tag=AD853_RS09700;product=bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG;protein_id=WP_038825149.1;transl_table=11 NZ_CPUY01000009.1 RefSeq gene 9057 11750 . + . ID=gene-AD853_RS09705;Name=gyrA;gbkey=Gene;gene=gyrA;gene_biotype=protein_coding;locus_tag=AD853_RS09705;old_locus_tag=ERS008462_01969 NZ_CPUY01000009.1 Protein Homology CDS 9057 11750 . + 0 ID=cds-WP_012105449.1;Parent=gene-AD853_RS09705;Dbxref=GenBank:WP_012105449.1;Name=WP_012105449.1;Ontology_term=GO:0006265,GO:0003916,GO:0003918,GO:0009330;gbkey=CDS;gene=gyrA;go_component=DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) complex|0009330||IEA;go_function=DNA topoisomerase activity|0003916||IEA,DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011191995.1;locus_tag=AD853_RS09705;product=DNA topoisomerase (ATP-hydrolyzing) subunit A;protein_id=WP_012105449.1;transl_table=11 NZ_CPUY01000009.1 RefSeq gene 11962 14811 . + . ID=gene-AD853_RS09715;Name=rcsC;gbkey=Gene;gene=rcsC;gene_biotype=protein_coding;locus_tag=AD853_RS09715;old_locus_tag=ERS008462_01970 NZ_CPUY01000009.1 Protein Homology CDS 11962 14811 . + 0 ID=cds-WP_012229319.1;Parent=gene-AD853_RS09715;Dbxref=GenBank:WP_012229319.1;Name=WP_012229319.1;Ontology_term=GO:0000160,GO:0006355,GO:0018106,GO:0000155,GO:0005524,GO:0016020;gbkey=CDS;gene=rcsC;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,ATP binding|0005524||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA,peptidyl-histidine phosphorylation|0018106||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011815975.1;locus_tag=AD853_RS09715;product=two-component system sensor histidine kinase RcsC;protein_id=WP_012229319.1;transl_table=11 NZ_CPUY01000009.1 RefSeq gene 14879 15532 . - . ID=gene-AD853_RS09720;Name=rcsB;gbkey=Gene;gene=rcsB;gene_biotype=protein_coding;locus_tag=AD853_RS09720;old_locus_tag=ERS008462_01971 NZ_CPUY01000009.1 Protein Homology CDS 14879 15532 . - 0 ID=cds-WP_002210824.1;Parent=gene-AD853_RS09720;Dbxref=GenBank:WP_002210824.1;Name=WP_002210824.1;gbkey=CDS;gene=rcsB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210824.1;locus_tag=AD853_RS09720;product=response regulator transcription factor RcsB;protein_id=WP_002210824.1;transl_table=11 NZ_CPUY01000009.1 RefSeq gene 15535 18228 . - . ID=gene-AD853_RS09725;Name=rcsD;gbkey=Gene;gene=rcsD;gene_biotype=protein_coding;locus_tag=AD853_RS09725;old_locus_tag=ERS008462_01972 NZ_CPUY01000009.1 Protein Homology CDS 15535 18228 . - 0 ID=cds-WP_038825148.1;Parent=gene-AD853_RS09725;Dbxref=GenBank:WP_038825148.1;Name=WP_038825148.1;Ontology_term=GO:0000160,GO:0009927,GO:0005886;gbkey=CDS;gene=rcsD;go_component=plasma membrane|0005886||IEA;go_function=histidine phosphotransfer kinase activity|0009927||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019082050.1;locus_tag=AD853_RS09725;product=phosphotransferase RcsD;protein_id=WP_038825148.1;transl_table=11 NZ_CPUY01000009.1 RefSeq gene 18252 19406 . - . ID=gene-AD853_RS09730;Name=AD853_RS09730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS09730;old_locus_tag=ERS008462_01973 NZ_CPUY01000009.1 Protein Homology CDS 18252 19406 . - 0 ID=cds-WP_002210825.1;Parent=gene-AD853_RS09730;Dbxref=GenBank:WP_002210825.1;Name=WP_002210825.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004708700.1;locus_tag=AD853_RS09730;product=MFS transporter;protein_id=WP_002210825.1;transl_table=11 NZ_CPUY01000009.1 RefSeq gene 20448 21563 . + . ID=gene-AD853_RS09735;Name=AD853_RS09735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS09735;old_locus_tag=ERS008462_01975 NZ_CPUY01000009.1 Protein Homology CDS 20448 21563 . + 0 ID=cds-WP_038825147.1;Parent=gene-AD853_RS09735;Dbxref=GenBank:WP_038825147.1;Name=WP_038825147.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210826.1;locus_tag=AD853_RS09735;product=porin OmpC;protein_id=WP_038825147.1;transl_table=11 NZ_CPUY01000009.1 RefSeq gene 21600 22211 . - . ID=gene-AD853_RS09740;Name=AD853_RS09740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS09740;old_locus_tag=ERS008462_01976 NZ_CPUY01000009.1 Protein Homology CDS 21600 22211 . - 0 ID=cds-WP_012105446.1;Parent=gene-AD853_RS09740;Dbxref=GenBank:WP_012105446.1;Name=WP_012105446.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105446.1;locus_tag=AD853_RS09740;product=TetR/AcrR family transcriptional regulator;protein_id=WP_012105446.1;transl_table=11 NZ_CPUY01000009.1 RefSeq gene 22356 22817 . + . ID=gene-AD853_RS09745;Name=AD853_RS09745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS09745;old_locus_tag=ERS008462_01977 NZ_CPUY01000009.1 Protein Homology CDS 22356 22817 . + 0 ID=cds-WP_012105445.1;Parent=gene-AD853_RS09745;Dbxref=GenBank:WP_012105445.1;Name=WP_012105445.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105445.1;locus_tag=AD853_RS09745;product=nuclear transport factor 2 family protein;protein_id=WP_012105445.1;transl_table=11 NZ_CPUY01000009.1 RefSeq gene 23088 23175 . + . ID=gene-AD853_RS09750;Name=AD853_RS09750;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD853_RS09750;old_locus_tag=ERS008462_01978 NZ_CPUY01000009.1 tRNAscan-SE tRNA 23088 23175 . + . ID=rna-AD853_RS09750;Parent=gene-AD853_RS09750;anticodon=(pos:23122..23124);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD853_RS09750;product=tRNA-Ser NZ_CPUY01000009.1 tRNAscan-SE exon 23088 23175 . + . ID=exon-AD853_RS09750-1;Parent=rna-AD853_RS09750;anticodon=(pos:23122..23124);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD853_RS09750;product=tRNA-Ser NZ_CPUY01000009.1 RefSeq gene 23181 23256 . + . ID=gene-AD853_RS09755;Name=AD853_RS09755;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD853_RS09755;old_locus_tag=ERS008462_01979 NZ_CPUY01000009.1 tRNAscan-SE tRNA 23181 23256 . + . ID=rna-AD853_RS09755;Parent=gene-AD853_RS09755;anticodon=(pos:23214..23216);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD853_RS09755;product=tRNA-Thr NZ_CPUY01000009.1 tRNAscan-SE exon 23181 23256 . + . ID=exon-AD853_RS09755-1;Parent=rna-AD853_RS09755;anticodon=(pos:23214..23216);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD853_RS09755;product=tRNA-Thr NZ_CPUY01000009.1 RefSeq gene 23444 24610 . - . ID=gene-AD853_RS09760;Name=ampH;gbkey=Gene;gene=ampH;gene_biotype=protein_coding;locus_tag=AD853_RS09760;old_locus_tag=ERS008462_01980 NZ_CPUY01000009.1 Protein Homology CDS 23444 24610 . - 0 ID=cds-WP_038823879.1;Parent=gene-AD853_RS09760;Dbxref=GenBank:WP_038823879.1;Name=WP_038823879.1;gbkey=CDS;gene=ampH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002228026.1;locus_tag=AD853_RS09760;product=D-alanyl-D-alanine-carboxypeptidase/endopeptidase AmpH;protein_id=WP_038823879.1;transl_table=11 NZ_CPUY01000009.1 RefSeq pseudogene 24885 26412 . - . ID=gene-AD853_RS09770;Name=AD853_RS09770;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD853_RS09770;pseudo=true NZ_CPUY01000009.1 Protein Homology CDS 24885 26412 . - 0 ID=cds-AD853_RS09770;Parent=gene-AD853_RS09770;Note=frameshifted;Ontology_term=GO:0008643,GO:0055085,GO:0015293,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA,transmembrane transporter activity|0022857||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208870.1;locus_tag=AD853_RS09770;product=MFS transporter;pseudo=true;transl_table=11 NZ_CPUY01000009.1 RefSeq gene 26789 27817 . + . ID=gene-AD853_RS09775;Name=AD853_RS09775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS09775;old_locus_tag=ERS008462_01983 NZ_CPUY01000009.1 Protein Homology CDS 26789 27817 . + 0 ID=cds-WP_002230695.1;Parent=gene-AD853_RS09775;Dbxref=GenBank:WP_002230695.1;Name=WP_002230695.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002230695.1;locus_tag=AD853_RS09775;product=MBL fold metallo-hydrolase;protein_id=WP_002230695.1;transl_table=11 NZ_CPUY01000009.1 RefSeq gene 27891 29678 . - . ID=gene-AD853_RS09780;Name=AD853_RS09780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS09780;old_locus_tag=ERS008462_01984 NZ_CPUY01000009.1 Protein Homology CDS 27891 29678 . - 0 ID=cds-WP_002208868.1;Parent=gene-AD853_RS09780;Dbxref=GenBank:WP_002208868.1;Name=WP_002208868.1;Ontology_term=GO:0006935,GO:0007165,GO:0004888,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane signaling receptor activity|0004888||IEA;go_process=chemotaxis|0006935||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105444.1;locus_tag=AD853_RS09780;product=methyl-accepting chemotaxis protein;protein_id=WP_002208868.1;transl_table=11 NZ_CPUY01000009.1 RefSeq gene 30085 31020 . - . ID=gene-AD853_RS09785;Name=ycoA;gbkey=Gene;gene=ycoA;gene_biotype=protein_coding;locus_tag=AD853_RS09785;old_locus_tag=ERS008462_01985 NZ_CPUY01000009.1 Protein Homology CDS 30085 31020 . - 0 ID=cds-WP_050124595.1;Parent=gene-AD853_RS09785;Dbxref=GenBank:WP_050124595.1;Name=WP_050124595.1;gbkey=CDS;gene=ycoA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208867.1;locus_tag=AD853_RS09785;product=omptin family outer membrane beta-barrel protein YcoA;protein_id=WP_050124595.1;transl_table=11 NZ_CPUY01000009.1 RefSeq gene 31192 31434 . - . ID=gene-AD853_RS09790;Name=AD853_RS09790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS09790;old_locus_tag=ERS008462_01986 NZ_CPUY01000009.1 Protein Homology CDS 31192 31434 . - 0 ID=cds-WP_002208866.1;Parent=gene-AD853_RS09790;Dbxref=GenBank:WP_002208866.1;Name=WP_002208866.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208866.1;locus_tag=AD853_RS09790;product=DinI family protein;protein_id=WP_002208866.1;transl_table=11 NZ_CPUY01000009.1 RefSeq gene 31640 32362 . - . ID=gene-AD853_RS09795;Name=AD853_RS09795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS09795;old_locus_tag=ERS008462_01987 NZ_CPUY01000009.1 Protein Homology CDS 31640 32362 . - 0 ID=cds-WP_002208864.1;Parent=gene-AD853_RS09795;Dbxref=GenBank:WP_002208864.1;Name=WP_002208864.1;Ontology_term=GO:0045892,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208864.1;locus_tag=AD853_RS09795;product=LexA family protein;protein_id=WP_002208864.1;transl_table=11 NZ_CPUY01000009.1 RefSeq gene 32690 33115 . + . ID=gene-AD853_RS09800;Name=AD853_RS09800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS09800;old_locus_tag=ERS008462_01988 NZ_CPUY01000009.1 Protein Homology CDS 32690 33115 . + 0 ID=cds-WP_002208863.1;Parent=gene-AD853_RS09800;Dbxref=GenBank:WP_002208863.1;Name=WP_002208863.1;Ontology_term=GO:0060567,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=negative regulation of termination of DNA-templated transcription|0060567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208863.1;locus_tag=AD853_RS09800;product=antiterminator Q family protein;protein_id=WP_002208863.1;transl_table=11 NZ_CPUY01000009.1 RefSeq gene 33326 34630 . + . ID=gene-AD853_RS09805;Name=otnK;gbkey=Gene;gene=otnK;gene_biotype=protein_coding;locus_tag=AD853_RS09805;old_locus_tag=ERS008462_01989 NZ_CPUY01000009.1 Protein Homology CDS 33326 34630 . + 0 ID=cds-WP_038823877.1;Parent=gene-AD853_RS09805;Dbxref=GenBank:WP_038823877.1;Name=WP_038823877.1;Ontology_term=GO:0005975,GO:0005524,GO:0016301;gbkey=CDS;gene=otnK;go_function=ATP binding|0005524||IEA,kinase activity|0016301||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208862.1;locus_tag=AD853_RS09805;product=3-oxo-tetronate kinase;protein_id=WP_038823877.1;transl_table=11 NZ_CPUY01000009.1 RefSeq gene 34729 35358 . + . ID=gene-AD853_RS09810;Name=otnC;gbkey=Gene;gene=otnC;gene_biotype=protein_coding;locus_tag=AD853_RS09810;old_locus_tag=ERS008462_01990 NZ_CPUY01000009.1 Protein Homology CDS 34729 35358 . + 0 ID=cds-WP_024063622.1;Parent=gene-AD853_RS09810;Dbxref=GenBank:WP_024063622.1;Name=WP_024063622.1;Ontology_term=GO:0005996,GO:0016829;gbkey=CDS;gene=otnC;go_function=lyase activity|0016829||IEA;go_process=monosaccharide metabolic process|0005996||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004706328.1;locus_tag=AD853_RS09810;product=3-oxo-tetronate 4-phosphate decarboxylase;protein_id=WP_024063622.1;transl_table=11 NZ_CPUY01000009.1 RefSeq gene 35361 36173 . + . ID=gene-AD853_RS09815;Name=AD853_RS09815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS09815;old_locus_tag=ERS008462_01991 NZ_CPUY01000009.1 Protein Homology CDS 35361 36173 . + 0 ID=cds-WP_002208861.1;Parent=gene-AD853_RS09815;Dbxref=GenBank:WP_002208861.1;Name=WP_002208861.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208861.1;locus_tag=AD853_RS09815;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_002208861.1;transl_table=11 NZ_CPUY01000009.1 RefSeq gene 36149 36943 . + . ID=gene-AD853_RS09820;Name=otnI;gbkey=Gene;gene=otnI;gene_biotype=protein_coding;locus_tag=AD853_RS09820;old_locus_tag=ERS008462_01992 NZ_CPUY01000009.1 Protein Homology CDS 36149 36943 . + 0 ID=cds-WP_002208860.1;Parent=gene-AD853_RS09820;Dbxref=GenBank:WP_002208860.1;Name=WP_002208860.1;Ontology_term=GO:0005975,GO:0016853;gbkey=CDS;gene=otnI;go_function=isomerase activity|0016853||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304338.1;locus_tag=AD853_RS09820;product=2-oxo-tetronate isomerase;protein_id=WP_002208860.1;transl_table=11 NZ_CPUY01000009.1 RefSeq gene 37574 37864 . + . ID=gene-AD853_RS09825;Name=AD853_RS09825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS09825;old_locus_tag=ERS008462_01993 NZ_CPUY01000009.1 Protein Homology CDS 37574 37864 . + 0 ID=cds-WP_002208859.1;Parent=gene-AD853_RS09825;Dbxref=GenBank:WP_002208859.1;Name=WP_002208859.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208859.1;locus_tag=AD853_RS09825;product=hypothetical protein;protein_id=WP_002208859.1;transl_table=11 NZ_CPUY01000009.1 RefSeq gene 37910 38527 . + . ID=gene-AD853_RS09830;Name=AD853_RS09830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS09830;old_locus_tag=ERS008462_01994 NZ_CPUY01000009.1 Protein Homology CDS 37910 38527 . + 0 ID=cds-WP_002208858.1;Parent=gene-AD853_RS09830;Dbxref=GenBank:WP_002208858.1;Name=WP_002208858.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015683893.1;locus_tag=AD853_RS09830;product=ATP-binding protein;protein_id=WP_002208858.1;transl_table=11 NZ_CPUY01000009.1 RefSeq gene 38532 38726 . + . ID=gene-AD853_RS09835;Name=AD853_RS09835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS09835;old_locus_tag=ERS008462_01995 NZ_CPUY01000009.1 Protein Homology CDS 38532 38726 . + 0 ID=cds-WP_002208857.1;Parent=gene-AD853_RS09835;Dbxref=GenBank:WP_002208857.1;Name=WP_002208857.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105441.1;locus_tag=AD853_RS09835;product=DUF2635 domain-containing protein;protein_id=WP_002208857.1;transl_table=11 NZ_CPUY01000009.1 RefSeq gene 38723 40231 . + . ID=gene-AD853_RS09840;Name=AD853_RS09840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS09840;old_locus_tag=ERS008462_01996 NZ_CPUY01000009.1 Protein Homology CDS 38723 40231 . + 0 ID=cds-WP_002208856.1;Parent=gene-AD853_RS09840;Dbxref=GenBank:WP_002208856.1;Name=WP_002208856.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004708661.1;locus_tag=AD853_RS09840;product=phage tail sheath subtilisin-like domain-containing protein;protein_id=WP_002208856.1;transl_table=11 NZ_CPUY01000009.1 RefSeq gene 40253 40621 . + . ID=gene-AD853_RS09845;Name=AD853_RS09845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS09845;old_locus_tag=ERS008462_01997 NZ_CPUY01000009.1 Protein Homology CDS 40253 40621 . + 0 ID=cds-WP_002208855.1;Parent=gene-AD853_RS09845;Dbxref=GenBank:WP_002208855.1;Name=WP_002208855.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208855.1;locus_tag=AD853_RS09845;product=phage tail tube protein;protein_id=WP_002208855.1;transl_table=11 NZ_CPUY01000009.1 RefSeq gene 40623 40922 . + . ID=gene-AD853_RS09850;Name=AD853_RS09850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS09850;old_locus_tag=ERS008462_01998 NZ_CPUY01000009.1 Protein Homology CDS 40623 40922 . + 0 ID=cds-WP_038823876.1;Parent=gene-AD853_RS09850;Dbxref=GenBank:WP_038823876.1;Name=WP_038823876.1;Ontology_term=GO:0098003;gbkey=CDS;go_process=viral tail assembly|0098003||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105439.1;locus_tag=AD853_RS09850;product=phage tail assembly protein;protein_id=WP_038823876.1;transl_table=11 NZ_CPUY01000009.1 RefSeq gene 41043 42536 . + . ID=gene-AD853_RS09855;Name=AD853_RS09855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS09855;old_locus_tag=ERS008462_01999 NZ_CPUY01000009.1 Protein Homology CDS 41043 42536 . + 0 ID=cds-WP_012304335.1;Parent=gene-AD853_RS09855;Dbxref=GenBank:WP_012304335.1;Name=WP_012304335.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208853.1;locus_tag=AD853_RS09855;product=hypothetical protein;protein_id=WP_012304335.1;transl_table=11 NZ_CPUY01000009.1 RefSeq pseudogene 42676 42762 . + . ID=gene-AD853_RS22650;Name=AD853_RS22650;end_range=42762,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD853_RS22650;partial=true;pseudo=true NZ_CPUY01000009.1 Protein Homology CDS 42676 42762 . + 0 ID=cds-AD853_RS22650;Parent=gene-AD853_RS22650;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=42762,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002224869.1;locus_tag=AD853_RS22650;partial=true;product=gluconate 5-dehydrogenase;pseudo=true;transl_table=11 NZ_CPUY01000009.1 RefSeq gene 42803 44209 . + . ID=gene-AD853_RS09870;Name=AD853_RS09870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS09870;old_locus_tag=ERS008462_02000 NZ_CPUY01000009.1 Protein Homology CDS 42803 44209 . + 0 ID=cds-WP_038824831.1;Parent=gene-AD853_RS09870;Dbxref=GenBank:WP_038824831.1;Name=WP_038824831.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208852.1;locus_tag=AD853_RS09870;product=DNA circularization protein;protein_id=WP_038824831.1;transl_table=11 NZ_CPUY01000009.1 RefSeq gene 44206 45261 . + . ID=gene-AD853_RS09875;Name=AD853_RS09875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS09875;old_locus_tag=ERS008462_02001 NZ_CPUY01000009.1 Protein Homology CDS 44206 45261 . + 0 ID=cds-WP_002208850.1;Parent=gene-AD853_RS09875;Dbxref=GenBank:WP_002208850.1;Name=WP_002208850.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012413587.1;locus_tag=AD853_RS09875;product=phage baseplate assembly protein;protein_id=WP_002208850.1;transl_table=11 NZ_CPUY01000009.1 RefSeq gene 45277 45873 . + . ID=gene-AD853_RS09880;Name=AD853_RS09880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS09880;old_locus_tag=ERS008462_02002 NZ_CPUY01000009.1 Protein Homology CDS 45277 45873 . + 0 ID=cds-WP_002215460.1;Parent=gene-AD853_RS09880;Dbxref=GenBank:WP_002215460.1;Name=WP_002215460.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002215460.1;locus_tag=AD853_RS09880;product=phage baseplate assembly protein domain-containing protein;protein_id=WP_002215460.1;transl_table=11 NZ_CPUY01000009.1 RefSeq gene 45870 46325 . + . ID=gene-AD853_RS09885;Name=AD853_RS09885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS09885;old_locus_tag=ERS008462_02003 NZ_CPUY01000009.1 Protein Homology CDS 45870 46325 . + 0 ID=cds-WP_002208848.1;Parent=gene-AD853_RS09885;Dbxref=GenBank:WP_002208848.1;Name=WP_002208848.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105435.1;locus_tag=AD853_RS09885;product=phage GP46 family protein;protein_id=WP_002208848.1;transl_table=11 NZ_CPUY01000009.1 RefSeq pseudogene 46329 47465 . + . ID=gene-AD853_RS09890;Name=AD853_RS09890;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD853_RS09890;old_locus_tag=ERS008462_02004;pseudo=true NZ_CPUY01000009.1 Protein Homology CDS 46329 47465 . + 0 ID=cds-AD853_RS09890;Parent=gene-AD853_RS09890;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019083508.1;locus_tag=AD853_RS09890;product=baseplate J/gp47 family protein;pseudo=true;transl_table=11 NZ_CPUY01000009.1 RefSeq gene 47462 48064 . + . ID=gene-AD853_RS20570;Name=AD853_RS20570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS20570;old_locus_tag=ERS008462_02005 NZ_CPUY01000009.1 Protein Homology CDS 47462 48064 . + 0 ID=cds-WP_011192006.1;Parent=gene-AD853_RS20570;Dbxref=GenBank:WP_011192006.1;Name=WP_011192006.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192006.1;locus_tag=AD853_RS20570;product=YmfQ family protein;protein_id=WP_011192006.1;transl_table=11 NZ_CPUY01000009.1 RefSeq gene 48161 48877 . + . ID=gene-AD853_RS09905;Name=AD853_RS09905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS09905;old_locus_tag=ERS008462_02006 NZ_CPUY01000009.1 Protein Homology CDS 48161 48877 . + 0 ID=cds-WP_011192007.1;Parent=gene-AD853_RS09905;Dbxref=GenBank:WP_011192007.1;Name=WP_011192007.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192007.1;locus_tag=AD853_RS09905;product=gp53-like domain-containing protein;protein_id=WP_011192007.1;transl_table=11 NZ_CPUY01000009.1 RefSeq gene 48879 49298 . + . ID=gene-AD853_RS09910;Name=AD853_RS09910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS09910;old_locus_tag=ERS008462_02007 NZ_CPUY01000009.1 Protein Homology CDS 48879 49298 . + 0 ID=cds-WP_012304333.1;Parent=gene-AD853_RS09910;Dbxref=GenBank:WP_012304333.1;Name=WP_012304333.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304333.1;locus_tag=AD853_RS09910;product=tail fiber assembly protein;protein_id=WP_012304333.1;transl_table=11 NZ_CPUY01000009.1 RefSeq gene 49757 50497 . + . ID=gene-AD853_RS09915;Name=AD853_RS09915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS09915;old_locus_tag=ERS008462_02008 NZ_CPUY01000009.1 Protein Homology CDS 49757 50497 . + 0 ID=cds-WP_002208843.1;Parent=gene-AD853_RS09915;Dbxref=GenBank:WP_002208843.1;Name=WP_002208843.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208843.1;locus_tag=AD853_RS09915;product=MurR/RpiR family transcriptional regulator;protein_id=WP_002208843.1;transl_table=11 NZ_CPUY01000009.1 RefSeq gene 50788 52224 . + . ID=gene-AD853_RS09920;Name=AD853_RS09920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS09920;old_locus_tag=ERS008462_02010 NZ_CPUY01000009.1 Protein Homology CDS 50788 52224 . + 0 ID=cds-WP_002208842.1;Parent=gene-AD853_RS09920;Dbxref=GenBank:WP_002208842.1;Name=WP_002208842.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012229399.1;locus_tag=AD853_RS09920;product=6-phospho-beta-glucosidase;protein_id=WP_002208842.1;transl_table=11 NZ_CPUY01000009.1 RefSeq gene 52350 52712 . - . ID=gene-AD853_RS09925;Name=AD853_RS09925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS09925;old_locus_tag=ERS008462_02011 NZ_CPUY01000009.1 Protein Homology CDS 52350 52712 . - 0 ID=cds-WP_002208841.1;Parent=gene-AD853_RS09925;Dbxref=GenBank:WP_002208841.1;Name=WP_002208841.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105431.1;locus_tag=AD853_RS09925;product=hypothetical protein;protein_id=WP_002208841.1;transl_table=11 NZ_CPUY01000009.1 RefSeq pseudogene 53052 53141 . - . ID=gene-AD853_RS21825;Name=AD853_RS21825;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD853_RS21825;old_locus_tag=ERS008462_02012;partial=true;pseudo=true;start_range=.,53052 NZ_CPUY01000009.1 Protein Homology CDS 53052 53141 . - 0 ID=cds-AD853_RS21825;Parent=gene-AD853_RS21825;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002217366.1;locus_tag=AD853_RS21825;partial=true;product=terminase small subunit;pseudo=true;start_range=.,53052;transl_table=11 NZ_CPUY01000009.1 RefSeq gene 53412 53900 . - . ID=gene-AD853_RS09930;Name=AD853_RS09930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS09930;old_locus_tag=ERS008462_02013 NZ_CPUY01000009.1 Protein Homology CDS 53412 53900 . - 0 ID=cds-WP_002208840.1;Parent=gene-AD853_RS09930;Dbxref=GenBank:WP_002208840.1;Name=WP_002208840.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016674080.1;locus_tag=AD853_RS09930;product=YrhA family protein;protein_id=WP_002208840.1;transl_table=11 NZ_CPUY01000009.1 RefSeq gene 53913 55061 . - . ID=gene-AD853_RS21830;Name=AD853_RS21830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS21830;old_locus_tag=ERS008462_02014 NZ_CPUY01000009.1 Protein Homology CDS 53913 55061 . - 0 ID=cds-WP_050124596.1;Parent=gene-AD853_RS21830;Dbxref=GenBank:WP_050124596.1;Name=WP_050124596.1;Ontology_term=GO:0003676,GO:0004519,GO:0008270;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,endonuclease activity|0004519||IEA,zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208839.1;locus_tag=AD853_RS21830;product=HNH endonuclease signature motif containing protein;protein_id=WP_050124596.1;transl_table=11 NZ_CPUY01000009.1 RefSeq gene 55418 55801 . - . ID=gene-AD853_RS20585;Name=AD853_RS20585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS20585 NZ_CPUY01000009.1 GeneMarkS-2+ CDS 55418 55801 . - 0 ID=cds-WP_002230704.1;Parent=gene-AD853_RS20585;Dbxref=GenBank:WP_002230704.1;Name=WP_002230704.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AD853_RS20585;product=DUF927 domain-containing protein;protein_id=WP_002230704.1;transl_table=11 NZ_CPUY01000009.1 RefSeq gene 55851 55927 . - . ID=gene-AD853_RS09940;Name=AD853_RS09940;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD853_RS09940;old_locus_tag=ERS008462_02015 NZ_CPUY01000009.1 tRNAscan-SE tRNA 55851 55927 . - . ID=rna-AD853_RS09940;Parent=gene-AD853_RS09940;anticodon=(pos:complement(55891..55893));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD853_RS09940;product=tRNA-Pro NZ_CPUY01000009.1 tRNAscan-SE exon 55851 55927 . - . ID=exon-AD853_RS09940-1;Parent=rna-AD853_RS09940;anticodon=(pos:complement(55891..55893));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD853_RS09940;product=tRNA-Pro NZ_CPUY01000009.1 RefSeq gene 56032 57828 . - . ID=gene-AD853_RS09945;Name=yejM;gbkey=Gene;gene=yejM;gene_biotype=protein_coding;locus_tag=AD853_RS09945;old_locus_tag=ERS008462_02016 NZ_CPUY01000009.1 Protein Homology CDS 56032 57828 . - 0 ID=cds-WP_002208837.1;Parent=gene-AD853_RS09945;Dbxref=GenBank:WP_002208837.1;Name=WP_002208837.1;Ontology_term=GO:0008484;gbkey=CDS;gene=yejM;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002230706.1;locus_tag=AD853_RS09945;product=LPS biosynthesis-modulating metalloenzyme YejM;protein_id=WP_002208837.1;transl_table=11 NZ_CPUY01000009.1 RefSeq gene 57856 58083 . - . ID=gene-AD853_RS09950;Name=AD853_RS09950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS09950;old_locus_tag=ERS008462_02017 NZ_CPUY01000009.1 Protein Homology CDS 57856 58083 . - 0 ID=cds-WP_002208836.1;Parent=gene-AD853_RS09950;Dbxref=GenBank:WP_002208836.1;Name=WP_002208836.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004700534.1;locus_tag=AD853_RS09950;product=YejL family protein;protein_id=WP_002208836.1;transl_table=11 NZ_CPUY01000009.1 RefSeq gene 58261 59265 . + . ID=gene-AD853_RS09955;Name=yejK;gbkey=Gene;gene=yejK;gene_biotype=protein_coding;locus_tag=AD853_RS09955;old_locus_tag=ERS008462_02018 NZ_CPUY01000009.1 Protein Homology CDS 58261 59265 . + 0 ID=cds-WP_038400045.1;Parent=gene-AD853_RS09955;Dbxref=GenBank:WP_038400045.1;Name=WP_038400045.1;Ontology_term=GO:0009295;gbkey=CDS;gene=yejK;go_component=nucleoid|0009295||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304331.1;locus_tag=AD853_RS09955;product=nucleoid-associated protein YejK;protein_id=WP_038400045.1;transl_table=11 NZ_CPUY01000009.1 RefSeq gene 59353 59637 . - . ID=gene-AD853_RS09960;Name=rplY;gbkey=Gene;gene=rplY;gene_biotype=protein_coding;locus_tag=AD853_RS09960;old_locus_tag=ERS008462_02019 NZ_CPUY01000009.1 Protein Homology CDS 59353 59637 . - 0 ID=cds-WP_002208834.1;Parent=gene-AD853_RS09960;Dbxref=GenBank:WP_002208834.1;Name=WP_002208834.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplY;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208834.1;locus_tag=AD853_RS09960;product=50S ribosomal protein L25;protein_id=WP_002208834.1;transl_table=11 NZ_CPUY01000009.1 RefSeq gene 59799 61556 . - . ID=gene-AD853_RS09965;Name=AD853_RS09965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS09965;old_locus_tag=ERS008462_02020 NZ_CPUY01000009.1 Protein Homology CDS 59799 61556 . - 0 ID=cds-WP_012105428.1;Parent=gene-AD853_RS09965;Dbxref=GenBank:WP_012105428.1;Name=WP_012105428.1;Ontology_term=GO:0003676,GO:0004386,GO:0005524,GO:0016887;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,helicase activity|0004386||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208833.1;locus_tag=AD853_RS09965;product=DEAD/DEAH box helicase;protein_id=WP_012105428.1;transl_table=11 NZ_CPUY01000009.1 RefSeq gene 62090 62797 . + . ID=gene-AD853_RS09970;Name=rsuA;gbkey=Gene;gene=rsuA;gene_biotype=protein_coding;locus_tag=AD853_RS09970;old_locus_tag=ERS008462_02021 NZ_CPUY01000009.1 Protein Homology CDS 62090 62797 . + 0 ID=cds-WP_050124597.1;Parent=gene-AD853_RS09970;Dbxref=GenBank:WP_050124597.1;Name=WP_050124597.1;gbkey=CDS;gene=rsuA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192013.1;locus_tag=AD853_RS09970;product=16S rRNA pseudouridine(516) synthase RsuA;protein_id=WP_050124597.1;transl_table=11 NZ_CPUY01000009.1 RefSeq gene 62958 64106 . + . ID=gene-AD853_RS09975;Name=AD853_RS09975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS09975;old_locus_tag=ERS008462_02022 NZ_CPUY01000009.1 Protein Homology CDS 62958 64106 . + 0 ID=cds-WP_051058884.1;Parent=gene-AD853_RS09975;Dbxref=GenBank:WP_051058884.1;Name=WP_051058884.1;Ontology_term=GO:0042908,GO:1990961,GO:0042910,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=xenobiotic transmembrane transporter activity|0042910||IEA;go_process=xenobiotic transport|0042908||IEA,xenobiotic detoxification by transmembrane export across the plasma membrane|1990961||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304330.1;locus_tag=AD853_RS09975;product=Bcr/CflA family multidrug efflux MFS transporter;protein_id=WP_051058884.1;transl_table=11 NZ_CPUY01000009.1 RefSeq gene 65065 65409 . + . ID=gene-AD853_RS09980;Name=AD853_RS09980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS09980;old_locus_tag=ERS008462_02023 NZ_CPUY01000009.1 Protein Homology CDS 65065 65409 . + 0 ID=cds-WP_033851703.1;Parent=gene-AD853_RS09980;Dbxref=GenBank:WP_033851703.1;Name=WP_033851703.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208829.1;locus_tag=AD853_RS09980;product=YejG family protein;protein_id=WP_033851703.1;transl_table=11 NZ_CPUY01000009.1 RefSeq gene 65491 67083 . - . ID=gene-AD853_RS09985;Name=yejF;gbkey=Gene;gene=yejF;gene_biotype=protein_coding;locus_tag=AD853_RS09985;old_locus_tag=ERS008462_02024 NZ_CPUY01000009.1 Protein Homology CDS 65491 67083 . - 0 ID=cds-WP_038825051.1;Parent=gene-AD853_RS09985;Dbxref=GenBank:WP_038825051.1;Name=WP_038825051.1;Ontology_term=GO:0006810,GO:0000166,GO:0005524;gbkey=CDS;gene=yejF;go_function=nucleotide binding|0000166||IEA,ATP binding|0005524||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105426.1;locus_tag=AD853_RS09985;product=microcin C ABC transporter ATP-binding protein YejF;protein_id=WP_038825051.1;transl_table=11 NZ_CPUY01000009.1 RefSeq gene 67085 68110 . - . ID=gene-AD853_RS09990;Name=AD853_RS09990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS09990;old_locus_tag=ERS008462_02025 NZ_CPUY01000009.1 Protein Homology CDS 67085 68110 . - 0 ID=cds-WP_002353954.1;Parent=gene-AD853_RS09990;Dbxref=GenBank:WP_002353954.1;Name=WP_002353954.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002353954.1;locus_tag=AD853_RS09990;product=ABC transporter permease;protein_id=WP_002353954.1;transl_table=11 NZ_CPUY01000009.1 RefSeq gene 68113 69213 . - . ID=gene-AD853_RS09995;Name=AD853_RS09995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS09995;old_locus_tag=ERS008462_02026 NZ_CPUY01000009.1 Protein Homology CDS 68113 69213 . - 0 ID=cds-WP_002208826.1;Parent=gene-AD853_RS09995;Dbxref=GenBank:WP_002208826.1;Name=WP_002208826.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019083498.1;locus_tag=AD853_RS09995;product=microcin C ABC transporter permease YejB;protein_id=WP_002208826.1;transl_table=11 NZ_CPUY01000009.1 RefSeq gene 69223 71031 . - . ID=gene-AD853_RS10000;Name=AD853_RS10000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS10000;old_locus_tag=ERS008462_02027 NZ_CPUY01000009.1 Protein Homology CDS 69223 71031 . - 0 ID=cds-WP_038825053.1;Parent=gene-AD853_RS10000;Dbxref=GenBank:WP_038825053.1;Name=WP_038825053.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105425.1;locus_tag=AD853_RS10000;product=extracellular solute-binding protein;protein_id=WP_038825053.1;transl_table=11 NZ_CPUY01000009.1 RefSeq gene 71113 72693 . - . ID=gene-AD853_RS10005;Name=AD853_RS10005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS10005;old_locus_tag=ERS008462_02028 NZ_CPUY01000009.1 Protein Homology CDS 71113 72693 . - 0 ID=cds-WP_071880055.1;Parent=gene-AD853_RS10005;Dbxref=GenBank:WP_071880055.1;Name=WP_071880055.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192017.1;locus_tag=AD853_RS10005;product=cyclic di-GMP phosphodiesterase;protein_id=WP_071880055.1;transl_table=11 NZ_CPUY01000009.1 RefSeq gene 73279 73863 . - . ID=gene-AD853_RS10010;Name=mepS;gbkey=Gene;gene=mepS;gene_biotype=protein_coding;locus_tag=AD853_RS10010;old_locus_tag=ERS008462_02029 NZ_CPUY01000009.1 Protein Homology CDS 73279 73863 . - 0 ID=cds-WP_002208822.1;Parent=gene-AD853_RS10010;Dbxref=GenBank:WP_002208822.1;Name=WP_002208822.1;gbkey=CDS;gene=mepS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004096016.1;locus_tag=AD853_RS10010;product=bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase;protein_id=WP_002208822.1;transl_table=11 NZ_CPUY01000009.1 RefSeq gene 74305 75006 . - . ID=gene-AD853_RS10015;Name=AD853_RS10015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS10015;old_locus_tag=ERS008462_02030 NZ_CPUY01000009.1 Protein Homology CDS 74305 75006 . - 0 ID=cds-WP_012105423.1;Parent=gene-AD853_RS10015;Dbxref=GenBank:WP_012105423.1;Name=WP_012105423.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192018.1;locus_tag=AD853_RS10015;product=phosphatase PAP2 family protein;protein_id=WP_012105423.1;transl_table=11 NZ_CPUY01000009.1 RefSeq gene 75065 76048 . - . ID=gene-AD853_RS10020;Name=AD853_RS10020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS10020;old_locus_tag=ERS008462_02031 NZ_CPUY01000009.1 Protein Homology CDS 75065 76048 . - 0 ID=cds-WP_012413591.1;Parent=gene-AD853_RS10020;Dbxref=GenBank:WP_012413591.1;Name=WP_012413591.1;Ontology_term=GO:0003924,GO:0005525,GO:0046872;gbkey=CDS;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012413591.1;locus_tag=AD853_RS10020;product=CobW family GTP-binding protein;protein_id=WP_012413591.1;transl_table=11 NZ_CPUY01000009.1 RefSeq gene 76364 76690 . + . ID=gene-AD853_RS20590;Name=AD853_RS20590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS20590;old_locus_tag=ERS008462_02032 NZ_CPUY01000009.1 Protein Homology CDS 76364 76690 . + 0 ID=cds-WP_002228021.1;Parent=gene-AD853_RS20590;Dbxref=GenBank:WP_002228021.1;Name=WP_002228021.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002228021.1;locus_tag=AD853_RS20590;product=hypothetical protein;protein_id=WP_002228021.1;transl_table=11 NZ_CPUY01000009.1 RefSeq gene 76856 77599 . + . ID=gene-AD853_RS10030;Name=AD853_RS10030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS10030;old_locus_tag=ERS008462_02033 NZ_CPUY01000009.1 Protein Homology CDS 76856 77599 . + 0 ID=cds-WP_002208816.1;Parent=gene-AD853_RS10030;Dbxref=GenBank:WP_002208816.1;Name=WP_002208816.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208816.1;locus_tag=AD853_RS10030;product=GntR family transcriptional regulator;protein_id=WP_002208816.1;transl_table=11 NZ_CPUY01000009.1 RefSeq gene 77728 79200 . - . ID=gene-AD853_RS10035;Name=AD853_RS10035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS10035;old_locus_tag=ERS008462_02034 NZ_CPUY01000009.1 Protein Homology CDS 77728 79200 . - 0 ID=cds-WP_038825732.1;Parent=gene-AD853_RS10035;Dbxref=GenBank:WP_038825732.1;Name=WP_038825732.1;Ontology_term=GO:0016616;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012413592.1;locus_tag=AD853_RS10035;product=mannitol dehydrogenase family protein;protein_id=WP_038825732.1;transl_table=11 NZ_CPUY01000009.1 RefSeq gene 79823 81016 . + . ID=gene-AD853_RS10040;Name=uxuA;gbkey=Gene;gene=uxuA;gene_biotype=protein_coding;locus_tag=AD853_RS10040;old_locus_tag=ERS008462_02035 NZ_CPUY01000009.1 Protein Homology CDS 79823 81016 . + 0 ID=cds-WP_002208813.1;Parent=gene-AD853_RS10040;Dbxref=GenBank:WP_002208813.1;Name=WP_002208813.1;Ontology_term=GO:0006064,GO:0008927;gbkey=CDS;gene=uxuA;go_function=mannonate dehydratase activity|0008927||IEA;go_process=glucuronate catabolic process|0006064||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208813.1;locus_tag=AD853_RS10040;product=mannonate dehydratase;protein_id=WP_002208813.1;transl_table=11 NZ_CPUY01000009.1 RefSeq gene 81156 81728 . - . ID=gene-AD853_RS10045;Name=yeiP;gbkey=Gene;gene=yeiP;gene_biotype=protein_coding;locus_tag=AD853_RS10045;old_locus_tag=ERS008462_02036 NZ_CPUY01000009.1 Protein Homology CDS 81156 81728 . - 0 ID=cds-WP_002228019.1;Parent=gene-AD853_RS10045;Dbxref=GenBank:WP_002228019.1;Name=WP_002228019.1;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=yeiP;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002228019.1;locus_tag=AD853_RS10045;product=elongation factor P-like protein YeiP;protein_id=WP_002228019.1;transl_table=11 NZ_CPUY01000009.1 RefSeq gene 81832 83076 . - . ID=gene-AD853_RS10050;Name=mtr;gbkey=Gene;gene=mtr;gene_biotype=protein_coding;locus_tag=AD853_RS10050;old_locus_tag=ERS008462_02037 NZ_CPUY01000009.1 Protein Homology CDS 81832 83076 . - 0 ID=cds-WP_002208812.1;Parent=gene-AD853_RS10050;Dbxref=GenBank:WP_002208812.1;Name=WP_002208812.1;Ontology_term=GO:0015801,GO:0015173,GO:0005886;gbkey=CDS;gene=mtr;go_component=plasma membrane|0005886||IEA;go_function=aromatic amino acid transmembrane transporter activity|0015173||IEA;go_process=aromatic amino acid transport|0015801||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012413593.1;locus_tag=AD853_RS10050;product=tryptophan permease;protein_id=WP_002208812.1;transl_table=11 NZ_CPUY01000009.1 RefSeq gene 83470 83724 . + . ID=gene-AD853_RS10055;Name=AD853_RS10055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS10055;old_locus_tag=ERS008462_02038 NZ_CPUY01000009.1 Protein Homology CDS 83470 83724 . + 0 ID=cds-WP_002208811.1;Parent=gene-AD853_RS10055;Dbxref=GenBank:WP_002208811.1;Name=WP_002208811.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208811.1;locus_tag=AD853_RS10055;product=YkgJ family cysteine cluster protein;protein_id=WP_002208811.1;transl_table=11 NZ_CPUY01000009.1 RefSeq gene 83793 84590 . - . ID=gene-AD853_RS10060;Name=AD853_RS10060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS10060;old_locus_tag=ERS008462_02039 NZ_CPUY01000009.1 Protein Homology CDS 83793 84590 . - 0 ID=cds-WP_038823883.1;Parent=gene-AD853_RS10060;Dbxref=GenBank:WP_038823883.1;Name=WP_038823883.1;Ontology_term=GO:0016491,GO:0070403;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016257855.1;locus_tag=AD853_RS10060;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_038823883.1;transl_table=11 NZ_CPUY01000009.1 RefSeq gene 84601 85566 . - . ID=gene-AD853_RS10065;Name=AD853_RS10065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS10065;old_locus_tag=ERS008462_02040 NZ_CPUY01000009.1 Protein Homology CDS 84601 85566 . - 0 ID=cds-WP_002230767.1;Parent=gene-AD853_RS10065;Dbxref=GenBank:WP_002230767.1;Name=WP_002230767.1;Ontology_term=GO:0006351,GO:0003682,GO:0003714,GO:0016616,GO:0070403,GO:0140297;gbkey=CDS;go_function=chromatin binding|0003682||IEA,transcription corepressor activity|0003714||IEA,oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA,NAD+ binding|0070403||IEA,DNA-binding transcription factor binding|0140297||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002230767.1;locus_tag=AD853_RS10065;product=C-terminal binding protein;protein_id=WP_002230767.1;transl_table=11 NZ_CPUY01000009.1 RefSeq gene 85563 86705 . - . ID=gene-AD853_RS10070;Name=AD853_RS10070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS10070;old_locus_tag=ERS008462_02041 NZ_CPUY01000009.1 Protein Homology CDS 85563 86705 . - 0 ID=cds-WP_012105417.1;Parent=gene-AD853_RS10070;Dbxref=GenBank:WP_012105417.1;Name=WP_012105417.1;Ontology_term=GO:0003824,GO:0046872;gbkey=CDS;go_function=catalytic activity|0003824||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208808.1;locus_tag=AD853_RS10070;product=fumarylacetoacetate hydrolase family protein;protein_id=WP_012105417.1;transl_table=11 NZ_CPUY01000009.1 RefSeq gene 87056 88552 . + . ID=gene-AD853_RS10075;Name=AD853_RS10075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS10075;old_locus_tag=ERS008462_02042 NZ_CPUY01000009.1 Protein Homology CDS 87056 88552 . + 0 ID=cds-WP_038823884.1;Parent=gene-AD853_RS10075;Dbxref=GenBank:WP_038823884.1;Name=WP_038823884.1;Ontology_term=GO:0004030;gbkey=CDS;go_function=aldehyde dehydrogenase [NAD(P)+] activity|0004030||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304325.1;locus_tag=AD853_RS10075;product=aldehyde dehydrogenase family protein;protein_id=WP_038823884.1;transl_table=11 NZ_CPUY01000009.1 RefSeq gene 88556 90118 . + . ID=gene-AD853_RS10080;Name=xylB;gbkey=Gene;gene=xylB;gene_biotype=protein_coding;locus_tag=AD853_RS10080;old_locus_tag=ERS008462_02043 NZ_CPUY01000009.1 Protein Homology CDS 88556 90118 . + 0 ID=cds-WP_038823885.1;Parent=gene-AD853_RS10080;Dbxref=GenBank:WP_038823885.1;Name=WP_038823885.1;Ontology_term=GO:0005997,GO:0004856;gbkey=CDS;gene=xylB;go_function=D-xylulokinase activity|0004856||IEA;go_process=xylulose metabolic process|0005997||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105416.1;locus_tag=AD853_RS10080;product=xylulokinase;protein_id=WP_038823885.1;transl_table=11 NZ_CPUY01000009.1 RefSeq gene 90138 90848 . + . ID=gene-AD853_RS10085;Name=rpiA;gbkey=Gene;gene=rpiA;gene_biotype=protein_coding;locus_tag=AD853_RS10085;old_locus_tag=ERS008462_02044 NZ_CPUY01000009.1 Protein Homology CDS 90138 90848 . + 0 ID=cds-WP_012229423.1;Parent=gene-AD853_RS10085;Dbxref=GenBank:WP_012229423.1;Name=WP_012229423.1;Ontology_term=GO:0006098,GO:0004751;gbkey=CDS;gene=rpiA;go_function=ribose-5-phosphate isomerase activity|0004751||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208805.1;locus_tag=AD853_RS10085;product=ribose 5-phosphate isomerase A;protein_id=WP_012229423.1;transl_table=11 NZ_CPUY01000009.1 RefSeq gene 90948 92036 . + . ID=gene-AD853_RS10090;Name=AD853_RS10090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS10090;old_locus_tag=ERS008462_02045 NZ_CPUY01000009.1 Protein Homology CDS 90948 92036 . + 0 ID=cds-WP_002208804.1;Parent=gene-AD853_RS10090;Dbxref=GenBank:WP_002208804.1;Name=WP_002208804.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016598704.1;locus_tag=AD853_RS10090;product=sugar ABC transporter substrate-binding protein;protein_id=WP_002208804.1;transl_table=11 NZ_CPUY01000009.1 RefSeq gene 92145 93719 . + . ID=gene-AD853_RS10095;Name=AD853_RS10095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS10095;old_locus_tag=ERS008462_02046 NZ_CPUY01000009.1 Protein Homology CDS 92145 93719 . + 0 ID=cds-WP_038400037.1;Parent=gene-AD853_RS10095;Dbxref=GenBank:WP_038400037.1;Name=WP_038400037.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192027.1;locus_tag=AD853_RS10095;product=sugar ABC transporter ATP-binding protein;protein_id=WP_038400037.1;transl_table=11 NZ_CPUY01000009.1 RefSeq gene 93755 94753 . + . ID=gene-AD853_RS10100;Name=AD853_RS10100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS10100;old_locus_tag=ERS008462_02047 NZ_CPUY01000009.1 Protein Homology CDS 93755 94753 . + 0 ID=cds-WP_038825702.1;Parent=gene-AD853_RS10100;Dbxref=GenBank:WP_038825702.1;Name=WP_038825702.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208802.1;locus_tag=AD853_RS10100;product=ABC transporter permease;protein_id=WP_038825702.1;transl_table=11 NZ_CPUY01000009.1 RefSeq gene 94826 95281 . - . ID=gene-AD853_RS10105;Name=AD853_RS10105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS10105;old_locus_tag=ERS008462_02048 NZ_CPUY01000009.1 Protein Homology CDS 94826 95281 . - 0 ID=cds-WP_002208801.1;Parent=gene-AD853_RS10105;Dbxref=GenBank:WP_002208801.1;Name=WP_002208801.1;Ontology_term=GO:0006203,GO:0009132,GO:0042262,GO:0017110,GO:0046872,GO:0047429;gbkey=CDS;go_function=nucleoside diphosphate phosphatase activity|0017110||IEA,metal ion binding|0046872||IEA,nucleoside triphosphate diphosphatase activity|0047429||IEA;go_process=dGTP catabolic process|0006203||IEA,nucleoside diphosphate metabolic process|0009132||IEA,DNA protection|0042262||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105412.1;locus_tag=AD853_RS10105;product=nucleotide triphosphate diphosphatase NUDT15;protein_id=WP_002208801.1;transl_table=11 NZ_CPUY01000009.1 RefSeq gene 95543 96676 . + . ID=gene-AD853_RS10110;Name=fruB;gbkey=Gene;gene=fruB;gene_biotype=protein_coding;locus_tag=AD853_RS10110;old_locus_tag=ERS008462_02049 NZ_CPUY01000009.1 Protein Homology CDS 95543 96676 . + 0 ID=cds-WP_038823888.1;Parent=gene-AD853_RS10110;Dbxref=GenBank:WP_038823888.1;Name=WP_038823888.1;gbkey=CDS;gene=fruB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019079941.1;locus_tag=AD853_RS10110;product=fused PTS fructose transporter subunit IIA/HPr protein;protein_id=WP_038823888.1;transl_table=11 NZ_CPUY01000009.1 RefSeq gene 96673 97611 . + . ID=gene-AD853_RS10115;Name=fruK;gbkey=Gene;gene=fruK;gene_biotype=protein_coding;locus_tag=AD853_RS10115;old_locus_tag=ERS008462_02050 NZ_CPUY01000009.1 Protein Homology CDS 96673 97611 . + 0 ID=cds-WP_038823891.1;Parent=gene-AD853_RS10115;Dbxref=GenBank:WP_038823891.1;Name=WP_038823891.1;Ontology_term=GO:0008662,GO:0016773;gbkey=CDS;gene=fruK;go_function=1-phosphofructokinase activity|0008662||IEA,phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311087.1;locus_tag=AD853_RS10115;product=1-phosphofructokinase;protein_id=WP_038823891.1;transl_table=11 NZ_CPUY01000009.1 RefSeq gene 97626 99326 . + . ID=gene-AD853_RS10120;Name=fruA;gbkey=Gene;gene=fruA;gene_biotype=protein_coding;locus_tag=AD853_RS10120;old_locus_tag=ERS008462_02051 NZ_CPUY01000009.1 Protein Homology CDS 97626 99326 . + 0 ID=cds-WP_038823892.1;Parent=gene-AD853_RS10120;Dbxref=GenBank:WP_038823892.1;Name=WP_038823892.1;Ontology_term=GO:0009401,GO:0008982,GO:0022877;gbkey=CDS;gene=fruA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA,protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity|0022877||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208797.1;locus_tag=AD853_RS10120;product=PTS fructose transporter subunit IIBC;protein_id=WP_038823892.1;transl_table=11 NZ_CPUY01000009.1 RefSeq gene 99651 100295 . + . ID=gene-AD853_RS10125;Name=AD853_RS10125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS10125;old_locus_tag=ERS008462_02052 NZ_CPUY01000009.1 Protein Homology CDS 99651 100295 . + 0 ID=cds-WP_038823893.1;Parent=gene-AD853_RS10125;Dbxref=GenBank:WP_038823893.1;Name=WP_038823893.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208796.1;locus_tag=AD853_RS10125;product=winged helix-turn-helix domain-containing protein;protein_id=WP_038823893.1;transl_table=11 NZ_CPUY01000009.1 RefSeq gene 100292 100780 . + . ID=gene-AD853_RS10130;Name=AD853_RS10130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS10130;old_locus_tag=ERS008462_02053 NZ_CPUY01000009.1 Protein Homology CDS 100292 100780 . + 0 ID=cds-WP_002216523.1;Parent=gene-AD853_RS10130;Dbxref=GenBank:WP_002216523.1;Name=WP_002216523.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105409.1;locus_tag=AD853_RS10130;product=PsaF/MyfF family fimbrial adhesin regulatory protein;protein_id=WP_002216523.1;transl_table=11 NZ_CPUY01000009.1 RefSeq gene 101325 101801 . + . ID=gene-AD853_RS10135;Name=psaA;gbkey=Gene;gene=psaA;gene_biotype=protein_coding;locus_tag=AD853_RS10135;old_locus_tag=ERS008462_02054 NZ_CPUY01000009.1 Protein Homology CDS 101325 101801 . + 0 ID=cds-WP_002208794.1;Parent=gene-AD853_RS10135;Dbxref=GenBank:WP_002208794.1;Name=WP_002208794.1;gbkey=CDS;gene=psaA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208794.1;locus_tag=AD853_RS10135;product=fimbrial polyadhesin PsaA;protein_id=WP_002208794.1;transl_table=11 NZ_CPUY01000009.1 RefSeq gene 101928 102749 . + . ID=gene-AD853_RS10140;Name=psaB;gbkey=Gene;gene=psaB;gene_biotype=protein_coding;locus_tag=AD853_RS10140;old_locus_tag=ERS008462_02055 NZ_CPUY01000009.1 Protein Homology CDS 101928 102749 . + 0 ID=cds-WP_002208793.1;Parent=gene-AD853_RS10140;Dbxref=GenBank:WP_002208793.1;Name=WP_002208793.1;gbkey=CDS;gene=psaB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208793.1;locus_tag=AD853_RS10140;product=chaperone protein PsaB;protein_id=WP_002208793.1;transl_table=11 NZ_CPUY01000009.1 RefSeq gene 102833 105304 . + . ID=gene-AD853_RS10145;Name=psaC;gbkey=Gene;gene=psaC;gene_biotype=protein_coding;locus_tag=AD853_RS10145;old_locus_tag=ERS008462_02056 NZ_CPUY01000009.1 Protein Homology CDS 102833 105304 . + 0 ID=cds-WP_002208792.1;Parent=gene-AD853_RS10145;Dbxref=GenBank:WP_002208792.1;Name=WP_002208792.1;gbkey=CDS;gene=psaC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304319.1;locus_tag=AD853_RS10145;product=fimbrial usher PsaC;protein_id=WP_002208792.1;transl_table=11 NZ_CPUY01000009.1 RefSeq gene 105375 106232 . - . ID=gene-AD853_RS10150;Name=nfo;gbkey=Gene;gene=nfo;gene_biotype=protein_coding;locus_tag=AD853_RS10150;old_locus_tag=ERS008462_02057 NZ_CPUY01000009.1 Protein Homology CDS 105375 106232 . - 0 ID=cds-WP_002208791.1;Parent=gene-AD853_RS10150;Dbxref=GenBank:WP_002208791.1;Name=WP_002208791.1;Ontology_term=GO:0006281,GO:0003677,GO:0008270;gbkey=CDS;gene=nfo;go_function=DNA binding|0003677||IEA,zinc ion binding|0008270||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208791.1;locus_tag=AD853_RS10150;product=deoxyribonuclease IV;protein_id=WP_002208791.1;transl_table=11 NZ_CPUY01000009.1 RefSeq gene 106396 107484 . - . ID=gene-AD853_RS10155;Name=AD853_RS10155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS10155;old_locus_tag=ERS008462_02058 NZ_CPUY01000009.1 Protein Homology CDS 106396 107484 . - 0 ID=cds-WP_038823895.1;Parent=gene-AD853_RS10155;Dbxref=GenBank:WP_038823895.1;Name=WP_038823895.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208790.1;locus_tag=AD853_RS10155;product=YeiH family protein;protein_id=WP_038823895.1;transl_table=11 NZ_CPUY01000009.1 RefSeq gene 108142 109014 . + . ID=gene-AD853_RS10160;Name=yieE;gbkey=Gene;gene=yieE;gene_biotype=protein_coding;locus_tag=AD853_RS10160;old_locus_tag=ERS008462_02059 NZ_CPUY01000009.1 Protein Homology CDS 108142 109014 . + 0 ID=cds-WP_002208788.1;Parent=gene-AD853_RS10160;Dbxref=GenBank:WP_002208788.1;Name=WP_002208788.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=yieE;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208788.1;locus_tag=AD853_RS10160;product=DNA-binding transcriptional regulator YeiE;protein_id=WP_002208788.1;transl_table=11 NZ_CPUY01000009.1 RefSeq gene 109272 110783 . + . ID=gene-AD853_RS10165;Name=AD853_RS10165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS10165;old_locus_tag=ERS008462_02061 NZ_CPUY01000009.1 Protein Homology CDS 109272 110783 . + 0 ID=cds-WP_002208786.1;Parent=gene-AD853_RS10165;Dbxref=GenBank:WP_002208786.1;Name=WP_002208786.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208786.1;locus_tag=AD853_RS10165;product=amino acid permease;protein_id=WP_002208786.1;transl_table=11 NZ_CPUY01000009.1 RefSeq gene 111069 112214 . + . ID=gene-AD853_RS10170;Name=yiuA;gbkey=Gene;gene=yiuA;gene_biotype=protein_coding;locus_tag=AD853_RS10170;old_locus_tag=ERS008462_02062 NZ_CPUY01000009.1 Protein Homology CDS 111069 112214 . + 0 ID=cds-WP_002208785.1;Parent=gene-AD853_RS10170;Dbxref=GenBank:WP_002208785.1;Name=WP_002208785.1;gbkey=CDS;gene=yiuA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208785.1;locus_tag=AD853_RS10170;product=iron-siderophore ABC transporter substrate-binding protein YiuA;protein_id=WP_002208785.1;transl_table=11 NZ_CPUY01000009.1 RefSeq gene 112409 113491 . + . ID=gene-AD853_RS10175;Name=AD853_RS10175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS10175;old_locus_tag=ERS008462_02063 NZ_CPUY01000009.1 Protein Homology CDS 112409 113491 . + 0 ID=cds-WP_002215451.1;Parent=gene-AD853_RS10175;Dbxref=GenBank:WP_002215451.1;Name=WP_002215451.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015673046.1;locus_tag=AD853_RS10175;product=FecCD family ABC transporter permease;protein_id=WP_002215451.1;transl_table=11 NZ_CPUY01000009.1 RefSeq gene 113488 114276 . + . ID=gene-AD853_RS10180;Name=AD853_RS10180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS10180;old_locus_tag=ERS008462_02064 NZ_CPUY01000009.1 Protein Homology CDS 113488 114276 . + 0 ID=cds-WP_011192030.1;Parent=gene-AD853_RS10180;Dbxref=GenBank:WP_011192030.1;Name=WP_011192030.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208783.1;locus_tag=AD853_RS10180;product=ABC transporter ATP-binding protein;protein_id=WP_011192030.1;transl_table=11 NZ_CPUY01000009.1 RefSeq gene 114536 116533 . + . ID=gene-AD853_RS10185;Name=AD853_RS10185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS10185;old_locus_tag=ERS008462_02065 NZ_CPUY01000009.1 Protein Homology CDS 114536 116533 . + 0 ID=cds-WP_002208782.1;Parent=gene-AD853_RS10185;Dbxref=GenBank:WP_002208782.1;Name=WP_002208782.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016673871.1;locus_tag=AD853_RS10185;product=ligand-gated channel protein;protein_id=WP_002208782.1;transl_table=11 NZ_CPUY01000009.1 RefSeq pseudogene 116944 117572 . - . ID=gene-AD853_RS10190;Name=AD853_RS10190;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD853_RS10190;old_locus_tag=ERS008462_02066;pseudo=true NZ_CPUY01000009.1 Protein Homology CDS 116944 117572 . - 0 ID=cds-AD853_RS10190;Parent=gene-AD853_RS10190;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208781.1;locus_tag=AD853_RS10190;product=glutathione S-transferase;pseudo=true;transl_table=11 NZ_CPUY01000009.1 RefSeq gene 117717 118367 . - . ID=gene-AD853_RS10195;Name=AD853_RS10195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS10195;old_locus_tag=ERS008462_02067 NZ_CPUY01000009.1 Protein Homology CDS 117717 118367 . - 0 ID=cds-WP_038825094.1;Parent=gene-AD853_RS10195;Dbxref=GenBank:WP_038825094.1;Name=WP_038825094.1;Ontology_term=GO:0016311,GO:0016791,GO:0046872;gbkey=CDS;go_function=phosphatase activity|0016791||IEA,metal ion binding|0046872||IEA;go_process=dephosphorylation|0016311||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002215448.1;locus_tag=AD853_RS10195;product=HAD family hydrolase;protein_id=WP_038825094.1;transl_table=11 NZ_CPUY01000009.1 RefSeq gene 118853 119920 . + . ID=gene-AD853_RS10200;Name=AD853_RS10200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS10200;old_locus_tag=ERS008462_02069 NZ_CPUY01000009.1 Protein Homology CDS 118853 119920 . + 0 ID=cds-WP_012304316.1;Parent=gene-AD853_RS10200;Dbxref=GenBank:WP_012304316.1;Name=WP_012304316.1;Ontology_term=GO:0005506,GO:0046872,GO:0051213;gbkey=CDS;go_function=iron ion binding|0005506||IEA,metal ion binding|0046872||IEA,dioxygenase activity|0051213||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304316.1;locus_tag=AD853_RS10200;product=isopenicillin N synthase family dioxygenase;protein_id=WP_012304316.1;transl_table=11 NZ_CPUY01000009.1 RefSeq gene 120079 120903 . + . ID=gene-AD853_RS10205;Name=AD853_RS10205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS10205;old_locus_tag=ERS008462_02070 NZ_CPUY01000009.1 Protein Homology CDS 120079 120903 . + 0 ID=cds-WP_038825096.1;Parent=gene-AD853_RS10205;Dbxref=GenBank:WP_038825096.1;Name=WP_038825096.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304315.1;locus_tag=AD853_RS10205;product=MetQ/NlpA family ABC transporter substrate-binding protein;protein_id=WP_038825096.1;transl_table=11 NZ_CPUY01000009.1 RefSeq gene 120900 121886 . + . ID=gene-AD853_RS10210;Name=AD853_RS10210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS10210;old_locus_tag=ERS008462_02071 NZ_CPUY01000009.1 Protein Homology CDS 120900 121886 . + 0 ID=cds-WP_002208776.1;Parent=gene-AD853_RS10210;Dbxref=GenBank:WP_002208776.1;Name=WP_002208776.1;Ontology_term=GO:0048473,GO:0005524,GO:0016887,GO:0033232,GO:0042626;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ABC-type D-methionine transporter activity|0033232||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=D-methionine transmembrane transport|0048473||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208776.1;locus_tag=AD853_RS10210;product=methionine ABC transporter ATP-binding protein;protein_id=WP_002208776.1;transl_table=11 NZ_CPUY01000009.1 RefSeq gene 121883 122554 . + . ID=gene-AD853_RS10215;Name=AD853_RS10215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS10215;old_locus_tag=ERS008462_02072 NZ_CPUY01000009.1 Protein Homology CDS 121883 122554 . + 0 ID=cds-WP_002208775.1;Parent=gene-AD853_RS10215;Dbxref=GenBank:WP_002208775.1;Name=WP_002208775.1;Ontology_term=GO:0048473,GO:0033232,GO:0042626;gbkey=CDS;go_function=ABC-type D-methionine transporter activity|0033232||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=D-methionine transmembrane transport|0048473||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208775.1;locus_tag=AD853_RS10215;product=methionine ABC transporter permease;protein_id=WP_002208775.1;transl_table=11 NZ_CPUY01000009.1 RefSeq gene 122889 124094 . + . ID=gene-AD853_RS10220;Name=AD853_RS10220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS10220;old_locus_tag=ERS008462_02073 NZ_CPUY01000009.1 Protein Homology CDS 122889 124094 . + 0 ID=cds-WP_002208774.1;Parent=gene-AD853_RS10220;Dbxref=GenBank:WP_002208774.1;Name=WP_002208774.1;Ontology_term=GO:0030655,GO:0008800;gbkey=CDS;go_function=beta-lactamase activity|0008800||IEA;go_process=beta-lactam antibiotic catabolic process|0030655||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012413598.1;locus_tag=AD853_RS10220;product=serine hydrolase;protein_id=WP_002208774.1;transl_table=11 NZ_CPUY01000009.1 RefSeq gene 124500 125801 . - . ID=gene-AD853_RS10230;Name=AD853_RS10230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS10230;old_locus_tag=ERS008462_02074 NZ_CPUY01000009.1 Protein Homology CDS 124500 125801 . - 0 ID=cds-WP_011192035.1;Parent=gene-AD853_RS10230;Dbxref=GenBank:WP_011192035.1;Name=WP_011192035.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192035.1;locus_tag=AD853_RS10230;product=HAAAP family serine/threonine permease;protein_id=WP_011192035.1;transl_table=11 NZ_CPUY01000009.1 RefSeq gene 126901 127665 . - . ID=gene-AD853_RS10235;Name=deoR;gbkey=Gene;gene=deoR;gene_biotype=protein_coding;locus_tag=AD853_RS10235;old_locus_tag=ERS008462_02075 NZ_CPUY01000009.1 Protein Homology CDS 126901 127665 . - 0 ID=cds-WP_038824894.1;Parent=gene-AD853_RS10235;Dbxref=GenBank:WP_038824894.1;Name=WP_038824894.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=deoR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208770.1;locus_tag=AD853_RS10235;product=DNA-binding transcriptional repressor DeoR;protein_id=WP_038824894.1;transl_table=11 NZ_CPUY01000009.1 RefSeq gene 127895 128566 . - . ID=gene-AD853_RS10240;Name=deoC;gbkey=Gene;gene=deoC;gene_biotype=protein_coding;locus_tag=AD853_RS10240;old_locus_tag=ERS008462_02076 NZ_CPUY01000009.1 Protein Homology CDS 127895 128566 . - 0 ID=cds-WP_002208769.1;Parent=gene-AD853_RS10240;Dbxref=GenBank:WP_002208769.1;Name=WP_002208769.1;Ontology_term=GO:0009264,GO:0004139,GO:0005737;gbkey=CDS;gene=deoC;go_component=cytoplasm|0005737||IEA;go_function=deoxyribose-phosphate aldolase activity|0004139||IEA;go_process=deoxyribonucleotide catabolic process|0009264||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012229439.1;locus_tag=AD853_RS10240;product=deoxyribose-phosphate aldolase;protein_id=WP_002208769.1;transl_table=11 NZ_CPUY01000009.1 RefSeq gene 128824 129429 . - . ID=gene-AD853_RS10245;Name=ybjG;gbkey=Gene;gene=ybjG;gene_biotype=protein_coding;locus_tag=AD853_RS10245;old_locus_tag=ERS008462_02077 NZ_CPUY01000009.1 Protein Homology CDS 128824 129429 . - 0 ID=cds-WP_002208768.1;Parent=gene-AD853_RS10245;Dbxref=GenBank:WP_002208768.1;Name=WP_002208768.1;Ontology_term=GO:0050380,GO:0005886;gbkey=CDS;gene=ybjG;go_component=plasma membrane|0005886||IEA;go_function=undecaprenyl-diphosphatase activity|0050380||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208768.1;locus_tag=AD853_RS10245;product=undecaprenyl-diphosphate phosphatase;protein_id=WP_002208768.1;transl_table=11 NZ_CPUY01000009.1 RefSeq gene 129429 130100 . - . ID=gene-AD853_RS10250;Name=AD853_RS10250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS10250;old_locus_tag=ERS008462_02078 NZ_CPUY01000009.1 Protein Homology CDS 129429 130100 . - 0 ID=cds-WP_002208767.1;Parent=gene-AD853_RS10250;Dbxref=GenBank:WP_002208767.1;Name=WP_002208767.1;Ontology_term=GO:0016791;gbkey=CDS;go_function=phosphatase activity|0016791||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208767.1;locus_tag=AD853_RS10250;product=phosphatase PAP2 family protein;protein_id=WP_002208767.1;transl_table=11 NZ_CPUY01000009.1 RefSeq gene 130577 132265 . - . ID=gene-AD853_RS10255;Name=AD853_RS10255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS10255;old_locus_tag=ERS008462_02080 NZ_CPUY01000009.1 Protein Homology CDS 130577 132265 . - 0 ID=cds-WP_002208766.1;Parent=gene-AD853_RS10255;Dbxref=GenBank:WP_002208766.1;Name=WP_002208766.1;Ontology_term=GO:0006813,GO:0008324;gbkey=CDS;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016678434.1;locus_tag=AD853_RS10255;product=aspartate:alanine antiporter;protein_id=WP_002208766.1;transl_table=11 NZ_CPUY01000009.1 RefSeq gene 132676 132939 . - . ID=gene-AD853_RS10260;Name=AD853_RS10260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS10260;old_locus_tag=ERS008462_02081 NZ_CPUY01000009.1 Protein Homology CDS 132676 132939 . - 0 ID=cds-WP_002208765.1;Parent=gene-AD853_RS10260;Dbxref=GenBank:WP_002208765.1;Name=WP_002208765.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208765.1;locus_tag=AD853_RS10260;product=GrxA family glutaredoxin;protein_id=WP_002208765.1;transl_table=11 NZ_CPUY01000009.1 RefSeq gene 133402 133716 . + . ID=gene-AD853_RS10265;Name=AD853_RS10265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS10265;old_locus_tag=ERS008462_02082 NZ_CPUY01000009.1 Protein Homology CDS 133402 133716 . + 0 ID=cds-WP_002216036.1;Parent=gene-AD853_RS10265;Dbxref=GenBank:WP_002216036.1;Name=WP_002216036.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002216036.1;locus_tag=AD853_RS10265;product=YbjC family protein;protein_id=WP_002216036.1;transl_table=11 NZ_CPUY01000009.1 RefSeq gene 133858 134343 . + . ID=gene-AD853_RS10275;Name=AD853_RS10275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS10275;old_locus_tag=ERS008462_02083 NZ_CPUY01000009.1 Protein Homology CDS 133858 134343 . + 0 ID=cds-WP_002208763.1;Parent=gene-AD853_RS10275;Dbxref=GenBank:WP_002208763.1;Name=WP_002208763.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208763.1;locus_tag=AD853_RS10275;product=YbjN domain-containing protein;protein_id=WP_002208763.1;transl_table=11 NZ_CPUY01000009.1 RefSeq gene 134847 135956 . + . ID=gene-AD853_RS10280;Name=potF;gbkey=Gene;gene=potF;gene_biotype=protein_coding;locus_tag=AD853_RS10280;old_locus_tag=ERS008462_02084 NZ_CPUY01000009.1 Protein Homology CDS 134847 135956 . + 0 ID=cds-WP_038830635.1;Parent=gene-AD853_RS10280;Dbxref=GenBank:WP_038830635.1;Name=WP_038830635.1;Ontology_term=GO:0015846,GO:0019808,GO:0042597;gbkey=CDS;gene=potF;go_component=periplasmic space|0042597||IEA;go_function=polyamine binding|0019808||IEA;go_process=polyamine transport|0015846||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308961.1;locus_tag=AD853_RS10280;product=spermidine/putrescine ABC transporter substrate-binding protein PotF;protein_id=WP_038830635.1;transl_table=11 NZ_CPUY01000009.1 RefSeq gene 136127 137260 . + . ID=gene-AD853_RS10285;Name=potG;gbkey=Gene;gene=potG;gene_biotype=protein_coding;locus_tag=AD853_RS10285;old_locus_tag=ERS008462_02085 NZ_CPUY01000009.1 Protein Homology CDS 136127 137260 . + 0 ID=cds-WP_002208760.1;Parent=gene-AD853_RS10285;Dbxref=GenBank:WP_002208760.1;Name=WP_002208760.1;Ontology_term=GO:0015846,GO:0055085,GO:0005524,GO:0015417,GO:0022857,GO:0043190;gbkey=CDS;gene=potG;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ABC-type polyamine transporter activity|0015417||IEA,transmembrane transporter activity|0022857||IEA;go_process=polyamine transport|0015846||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004717281.1;locus_tag=AD853_RS10285;product=putrescine ABC transporter ATP-binding subunit PotG;protein_id=WP_002208760.1;transl_table=11 NZ_CPUY01000009.1 RefSeq gene 137285 138250 . + . ID=gene-AD853_RS10290;Name=potH;gbkey=Gene;gene=potH;gene_biotype=protein_coding;locus_tag=AD853_RS10290;old_locus_tag=ERS008462_02086 NZ_CPUY01000009.1 Protein Homology CDS 137285 138250 . + 0 ID=cds-WP_038824891.1;Parent=gene-AD853_RS10290;Dbxref=GenBank:WP_038824891.1;Name=WP_038824891.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=potH;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192037.1;locus_tag=AD853_RS10290;product=putrescine ABC transporter permease PotH;protein_id=WP_038824891.1;transl_table=11 NZ_CPUY01000009.1 RefSeq gene 138247 139092 . + . ID=gene-AD853_RS10295;Name=potI;gbkey=Gene;gene=potI;gene_biotype=protein_coding;locus_tag=AD853_RS10295;old_locus_tag=ERS008462_02087 NZ_CPUY01000009.1 Protein Homology CDS 138247 139092 . + 0 ID=cds-WP_002208758.1;Parent=gene-AD853_RS10295;Dbxref=GenBank:WP_002208758.1;Name=WP_002208758.1;Ontology_term=GO:0055085;gbkey=CDS;gene=potI;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004965061.1;locus_tag=AD853_RS10295;product=putrescine ABC transporter permease PotI;protein_id=WP_002208758.1;transl_table=11 NZ_CPUY01000009.1 RefSeq gene 139218 139682 . + . ID=gene-AD853_RS10300;Name=AD853_RS10300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS10300;old_locus_tag=ERS008462_02088 NZ_CPUY01000009.1 Protein Homology CDS 139218 139682 . + 0 ID=cds-WP_002208757.1;Parent=gene-AD853_RS10300;Dbxref=GenBank:WP_002208757.1;Name=WP_002208757.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192038.1;locus_tag=AD853_RS10300;product=YbjO family protein;protein_id=WP_002208757.1;transl_table=11 NZ_CPUY01000009.1 RefSeq gene 139766 140896 . + . ID=gene-AD853_RS10305;Name=rlmC;gbkey=Gene;gene=rlmC;gene_biotype=protein_coding;locus_tag=AD853_RS10305;old_locus_tag=ERS008462_02089 NZ_CPUY01000009.1 Protein Homology CDS 139766 140896 . + 0 ID=cds-WP_038824890.1;Parent=gene-AD853_RS10305;Dbxref=GenBank:WP_038824890.1;Name=WP_038824890.1;Ontology_term=GO:0000154,GO:0016070,GO:0008649;gbkey=CDS;gene=rlmC;go_function=rRNA methyltransferase activity|0008649||IEA;go_process=rRNA modification|0000154||IEA,RNA metabolic process|0016070||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208756.1;locus_tag=AD853_RS10305;product=23S rRNA (uracil(747)-C(5))-methyltransferase RlmC;protein_id=WP_038824890.1;transl_table=11 NZ_CPUY01000009.1 RefSeq gene 141023 141754 . - . ID=gene-AD853_RS10310;Name=AD853_RS10310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS10310;old_locus_tag=ERS008462_02090 NZ_CPUY01000009.1 Protein Homology CDS 141023 141754 . - 0 ID=cds-WP_002220045.1;Parent=gene-AD853_RS10310;Dbxref=GenBank:WP_002220045.1;Name=WP_002220045.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001295339.1;locus_tag=AD853_RS10310;product=arginine ABC transporter substrate-binding protein;protein_id=WP_002220045.1;transl_table=11 NZ_CPUY01000009.1 RefSeq gene 142523 143449 . + . ID=gene-AD853_RS10320;Name=AD853_RS10320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS10320;old_locus_tag=ERS008462_02091 NZ_CPUY01000009.1 Protein Homology CDS 142523 143449 . + 0 ID=cds-WP_002211378.1;Parent=gene-AD853_RS10320;Dbxref=GenBank:WP_002211378.1;Name=WP_002211378.1;Ontology_term=GO:0005743,GO:0016020,GO:0035632;gbkey=CDS;go_component=mitochondrial inner membrane|0005743||IEA,membrane|0016020||IEA,mitochondrial prohibitin complex|0035632||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211378.1;locus_tag=AD853_RS10320;product=prohibitin family protein;protein_id=WP_002211378.1;transl_table=11 NZ_CPUY01000009.1 RefSeq gene 143862 144953 . + . ID=gene-AD853_RS10325;Name=AD853_RS10325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS10325;old_locus_tag=ERS008462_02092 NZ_CPUY01000009.1 Protein Homology CDS 143862 144953 . + 0 ID=cds-WP_032466211.1;Parent=gene-AD853_RS10325;Dbxref=GenBank:WP_032466211.1;Name=WP_032466211.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105397.1;locus_tag=AD853_RS10325;product=ABC transporter substrate-binding protein;protein_id=WP_032466211.1;transl_table=11 NZ_CPUY01000009.1 RefSeq gene 145061 146011 . + . ID=gene-AD853_RS10330;Name=AD853_RS10330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS10330;old_locus_tag=ERS008462_02093 NZ_CPUY01000009.1 Protein Homology CDS 145061 146011 . + 0 ID=cds-WP_197684172.1;Parent=gene-AD853_RS10330;Dbxref=GenBank:WP_197684172.1;Name=WP_197684172.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: protein motif:HMM:NF013219.6;locus_tag=AD853_RS10330;product=FecCD family ABC transporter permease;protein_id=WP_197684172.1;transl_table=11 NZ_CPUY01000009.1 RefSeq gene 146008 146793 . + . ID=gene-AD853_RS10335;Name=AD853_RS10335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS10335;old_locus_tag=ERS008462_02094 NZ_CPUY01000009.1 Protein Homology CDS 146008 146793 . + 0 ID=cds-WP_012105395.1;Parent=gene-AD853_RS10335;Dbxref=GenBank:WP_012105395.1;Name=WP_012105395.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105395.1;locus_tag=AD853_RS10335;product=ABC transporter ATP-binding protein;protein_id=WP_012105395.1;transl_table=11 NZ_CPUY01000009.1 RefSeq gene 146781 147578 . + . ID=gene-AD853_RS10340;Name=AD853_RS10340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS10340;old_locus_tag=ERS008462_02095 NZ_CPUY01000009.1 Protein Homology CDS 146781 147578 . + 0 ID=cds-WP_012304311.1;Parent=gene-AD853_RS10340;Dbxref=GenBank:WP_012304311.1;Name=WP_012304311.1;Ontology_term=GO:0030418,GO:0030410;gbkey=CDS;go_function=nicotianamine synthase activity|0030410||IEA;go_process=nicotianamine biosynthetic process|0030418||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304311.1;locus_tag=AD853_RS10340;product=nicotianamine synthase family protein;protein_id=WP_012304311.1;transl_table=11 NZ_CPUY01000009.1 RefSeq gene 147571 148920 . + . ID=gene-AD853_RS10345;Name=AD853_RS10345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS10345;old_locus_tag=ERS008462_02096 NZ_CPUY01000009.1 Protein Homology CDS 147571 148920 . + 0 ID=cds-WP_038824631.1;Parent=gene-AD853_RS10345;Dbxref=GenBank:WP_038824631.1;Name=WP_038824631.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211373.1;locus_tag=AD853_RS10345;product=opine metallophore biosynthesis dehydrogenase;protein_id=WP_038824631.1;transl_table=11 NZ_CPUY01000009.1 RefSeq gene 148917 149762 . + . ID=gene-AD853_RS10350;Name=AD853_RS10350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS10350;old_locus_tag=ERS008462_02097 NZ_CPUY01000009.1 Protein Homology CDS 148917 149762 . + 0 ID=cds-WP_002223483.1;Parent=gene-AD853_RS10350;Dbxref=GenBank:WP_002223483.1;Name=WP_002223483.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211372.1;locus_tag=AD853_RS10350;product=DMT family transporter;protein_id=WP_002223483.1;transl_table=11 NZ_CPUY01000009.1 RefSeq gene 149787 149936 . - . ID=gene-AD853_RS21835;Name=AD853_RS21835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS21835 NZ_CPUY01000009.1 Protein Homology CDS 149787 149936 . - 0 ID=cds-WP_002211371.1;Parent=gene-AD853_RS21835;Dbxref=GenBank:WP_002211371.1;Name=WP_002211371.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211371.1;locus_tag=AD853_RS21835;product=hypothetical protein;protein_id=WP_002211371.1;transl_table=11 NZ_CPUY01000009.1 RefSeq gene 149952 150620 . - . ID=gene-AD853_RS10355;Name=artM;gbkey=Gene;gene=artM;gene_biotype=protein_coding;locus_tag=AD853_RS10355;old_locus_tag=ERS008462_02098 NZ_CPUY01000009.1 Protein Homology CDS 149952 150620 . - 0 ID=cds-WP_038824633.1;Parent=gene-AD853_RS10355;Dbxref=GenBank:WP_038824633.1;Name=WP_038824633.1;Ontology_term=GO:0071705,GO:0022857,GO:0016020,GO:0043190;gbkey=CDS;gene=artM;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=nitrogen compound transport|0071705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015671714.1;locus_tag=AD853_RS10355;product=arginine ABC transporter permease ArtM;protein_id=WP_038824633.1;transl_table=11 NZ_CPUY01000009.1 RefSeq gene 150620 151336 . - . ID=gene-AD853_RS10360;Name=artQ;gbkey=Gene;gene=artQ;gene_biotype=protein_coding;locus_tag=AD853_RS10360;old_locus_tag=ERS008462_02099 NZ_CPUY01000009.1 Protein Homology CDS 150620 151336 . - 0 ID=cds-WP_038824635.1;Parent=gene-AD853_RS10360;Dbxref=GenBank:WP_038824635.1;Name=WP_038824635.1;Ontology_term=GO:0055085,GO:0071705,GO:0022857,GO:0016020,GO:0043190;gbkey=CDS;gene=artQ;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA,nitrogen compound transport|0071705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011906341.1;locus_tag=AD853_RS10360;product=arginine ABC transporter permease ArtQ;protein_id=WP_038824635.1;transl_table=11 NZ_CPUY01000009.1 RefSeq gene 151348 152079 . - . ID=gene-AD853_RS10365;Name=artJ;gbkey=Gene;gene=artJ;gene_biotype=protein_coding;locus_tag=AD853_RS10365;old_locus_tag=ERS008462_02100 NZ_CPUY01000009.1 Protein Homology CDS 151348 152079 . - 0 ID=cds-WP_002211368.1;Parent=gene-AD853_RS10365;Dbxref=GenBank:WP_002211368.1;Name=WP_002211368.1;gbkey=CDS;gene=artJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211368.1;locus_tag=AD853_RS10365;product=arginine ABC transporter substrate-binding protein;protein_id=WP_002211368.1;transl_table=11 NZ_CPUY01000009.1 RefSeq gene 152100 152828 . - . ID=gene-AD853_RS10370;Name=artP;gbkey=Gene;gene=artP;gene_biotype=protein_coding;locus_tag=AD853_RS10370;old_locus_tag=ERS008462_02101 NZ_CPUY01000009.1 Protein Homology CDS 152100 152828 . - 0 ID=cds-WP_012105392.1;Parent=gene-AD853_RS10370;Dbxref=GenBank:WP_012105392.1;Name=WP_012105392.1;Ontology_term=GO:0003333,GO:0005524,GO:0015424,GO:0043190;gbkey=CDS;gene=artP;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ABC-type amino acid transporter activity|0015424||IEA;go_process=amino acid transmembrane transport|0003333||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001742668.1;locus_tag=AD853_RS10370;product=arginine ABC transporter ATP-binding protein ArtP;protein_id=WP_012105392.1;transl_table=11 NZ_CPUY01000009.1 RefSeq gene 153123 153683 . - . ID=gene-AD853_RS10375;Name=AD853_RS10375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS10375;old_locus_tag=ERS008462_02102 NZ_CPUY01000009.1 Protein Homology CDS 153123 153683 . - 0 ID=cds-WP_002211366.1;Parent=gene-AD853_RS10375;Dbxref=GenBank:WP_002211366.1;Name=WP_002211366.1;Ontology_term=GO:0046417;gbkey=CDS;go_process=chorismate metabolic process|0046417||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211366.1;locus_tag=AD853_RS10375;product=chorismate mutase;protein_id=WP_002211366.1;transl_table=11 NZ_CPUY01000009.1 RefSeq gene 153853 154428 . - . ID=gene-AD853_RS10380;Name=AD853_RS10380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS10380;old_locus_tag=ERS008462_02103 NZ_CPUY01000009.1 Protein Homology CDS 153853 154428 . - 0 ID=cds-WP_002211365.1;Parent=gene-AD853_RS10380;Dbxref=GenBank:WP_002211365.1;Name=WP_002211365.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211365.1;locus_tag=AD853_RS10380;product=lipoprotein;protein_id=WP_002211365.1;transl_table=11 NZ_CPUY01000009.1 RefSeq gene 154525 155532 . - . ID=gene-AD853_RS10385;Name=AD853_RS10385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS10385;old_locus_tag=ERS008462_02104 NZ_CPUY01000009.1 Protein Homology CDS 154525 155532 . - 0 ID=cds-WP_002211364.1;Parent=gene-AD853_RS10385;Dbxref=GenBank:WP_002211364.1;Name=WP_002211364.1;Ontology_term=GO:0016491,GO:0051287,GO:0070403;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD binding|0051287||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211364.1;locus_tag=AD853_RS10385;product=NAD-dependent epimerase/dehydratase family protein;protein_id=WP_002211364.1;transl_table=11 NZ_CPUY01000009.1 RefSeq gene 155632 157122 . - . ID=gene-AD853_RS10390;Name=AD853_RS10390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS10390;old_locus_tag=ERS008462_02105 NZ_CPUY01000009.1 Protein Homology CDS 155632 157122 . - 0 ID=cds-WP_038824636.1;Parent=gene-AD853_RS10390;Dbxref=GenBank:WP_038824636.1;Name=WP_038824636.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192045.1;locus_tag=AD853_RS10390;product=DUF2867 domain-containing protein;protein_id=WP_038824636.1;transl_table=11 NZ_CPUY01000009.1 RefSeq gene 157119 158138 . - . ID=gene-AD853_RS10395;Name=ltaE;gbkey=Gene;gene=ltaE;gene_biotype=protein_coding;locus_tag=AD853_RS10395;old_locus_tag=ERS008462_02106 NZ_CPUY01000009.1 Protein Homology CDS 157119 158138 . - 0 ID=cds-WP_002211362.1;Parent=gene-AD853_RS10395;Dbxref=GenBank:WP_002211362.1;Name=WP_002211362.1;Ontology_term=GO:0006520,GO:0016829;gbkey=CDS;gene=ltaE;go_function=lyase activity|0016829||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105391.1;locus_tag=AD853_RS10395;product=low-specificity L-threonine aldolase;protein_id=WP_002211362.1;transl_table=11 NZ_CPUY01000009.1 RefSeq gene 158171 158278 . - . ID=gene-AD853_RS22655;Name=AD853_RS22655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS22655 NZ_CPUY01000009.1 Protein Homology CDS 158171 158278 . - 0 ID=cds-WP_196299229.1;Parent=gene-AD853_RS22655;Dbxref=GenBank:WP_196299229.1;Name=WP_196299229.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002264692.1;locus_tag=AD853_RS22655;product=gluconate 5-dehydrogenase;protein_id=WP_196299229.1;transl_table=11 NZ_CPUY01000009.1 RefSeq gene 158581 160302 . - . ID=gene-AD853_RS10400;Name=poxB;gbkey=Gene;gene=poxB;gene_biotype=protein_coding;locus_tag=AD853_RS10400;old_locus_tag=ERS008462_02107 NZ_CPUY01000009.1 Protein Homology CDS 158581 160302 . - 0 ID=cds-WP_038825069.1;Parent=gene-AD853_RS10400;Dbxref=GenBank:WP_038825069.1;Name=WP_038825069.1;Ontology_term=GO:0006090,GO:0000287,GO:0030976,GO:0052737;gbkey=CDS;gene=poxB;go_function=magnesium ion binding|0000287||IEA,thiamine pyrophosphate binding|0030976||IEA,pyruvate dehydrogenase (quinone) activity|0052737||IEA;go_process=pyruvate metabolic process|0006090||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192046.1;locus_tag=AD853_RS10400;product=ubiquinone-dependent pyruvate dehydrogenase;protein_id=WP_038825069.1;transl_table=11 NZ_CPUY01000009.1 RefSeq gene 160446 161468 . - . ID=gene-AD853_RS10405;Name=hcr;gbkey=Gene;gene=hcr;gene_biotype=protein_coding;locus_tag=AD853_RS10405;old_locus_tag=ERS008462_02108 NZ_CPUY01000009.1 Protein Homology CDS 160446 161468 . - 0 ID=cds-WP_038825070.1;Parent=gene-AD853_RS10405;Dbxref=GenBank:WP_038825070.1;Name=WP_038825070.1;Ontology_term=GO:0016491,GO:0051536;gbkey=CDS;gene=hcr;go_function=oxidoreductase activity|0016491||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004389605.1;locus_tag=AD853_RS10405;product=NADH oxidoreductase;protein_id=WP_038825070.1;transl_table=11 NZ_CPUY01000009.1 RefSeq gene 161582 163234 . - . ID=gene-AD853_RS10410;Name=hcp;gbkey=Gene;gene=hcp;gene_biotype=protein_coding;locus_tag=AD853_RS10410;old_locus_tag=ERS008462_02109 NZ_CPUY01000009.1 Protein Homology CDS 161582 163234 . - 0 ID=cds-WP_038825071.1;Parent=gene-AD853_RS10410;Dbxref=GenBank:WP_038825071.1;Name=WP_038825071.1;Ontology_term=GO:0016661,GO:0050418,GO:0051536,GO:0005737;gbkey=CDS;gene=hcp;go_component=cytoplasm|0005737||IEA;go_function=oxidoreductase activity%2C acting on other nitrogenous compounds as donors|0016661||IEA,hydroxylamine reductase activity|0050418||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011816026.1;locus_tag=AD853_RS10410;product=hydroxylamine reductase;protein_id=WP_038825071.1;transl_table=11 NZ_CPUY01000009.1 RefSeq gene 163435 164331 . - . ID=gene-AD853_RS10415;Name=AD853_RS10415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS10415;old_locus_tag=ERS008462_02110 NZ_CPUY01000009.1 Protein Homology CDS 163435 164331 . - 0 ID=cds-WP_002211358.1;Parent=gene-AD853_RS10415;Dbxref=GenBank:WP_002211358.1;Name=WP_002211358.1;Ontology_term=GO:1903401,GO:0015661;gbkey=CDS;go_function=L-lysine efflux transmembrane transporter activity|0015661||IEA;go_process=L-lysine transmembrane transport|1903401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211358.1;locus_tag=AD853_RS10415;product=LysO family transporter;protein_id=WP_002211358.1;transl_table=11 NZ_CPUY01000009.1 RefSeq gene 164684 166351 . + . ID=gene-AD853_RS10420;Name=AD853_RS10420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS10420;old_locus_tag=ERS008462_02111 NZ_CPUY01000009.1 Protein Homology CDS 164684 166351 . + 0 ID=cds-WP_002211356.1;Parent=gene-AD853_RS10420;Dbxref=GenBank:WP_002211356.1;Name=WP_002211356.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011171807.1;locus_tag=AD853_RS10420;product=ATP-dependent endonuclease;protein_id=WP_002211356.1;transl_table=11 NZ_CPUY01000009.1 RefSeq gene 166488 167435 . - . ID=gene-AD853_RS10425;Name=AD853_RS10425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS10425;old_locus_tag=ERS008462_02112 NZ_CPUY01000009.1 Protein Homology CDS 166488 167435 . - 0 ID=cds-WP_038825073.1;Parent=gene-AD853_RS10425;Dbxref=GenBank:WP_038825073.1;Name=WP_038825073.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211355.1;locus_tag=AD853_RS10425;product=VirK/YbjX family protein;protein_id=WP_038825073.1;transl_table=11 NZ_CPUY01000009.1 RefSeq gene 167668 168780 . + . ID=gene-AD853_RS10430;Name=macA;gbkey=Gene;gene=macA;gene_biotype=protein_coding;locus_tag=AD853_RS10430;old_locus_tag=ERS008462_02113 NZ_CPUY01000009.1 Protein Homology CDS 167668 168780 . + 0 ID=cds-WP_038825077.1;Parent=gene-AD853_RS10430;Dbxref=GenBank:WP_038825077.1;Name=WP_038825077.1;Ontology_term=GO:1990961,GO:0022857,GO:0019898,GO:1990195;gbkey=CDS;gene=macA;go_component=extrinsic component of membrane|0019898||IEA,macrolide transmembrane transporter complex|1990195||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=xenobiotic detoxification by transmembrane export across the plasma membrane|1990961||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105389.1;locus_tag=AD853_RS10430;product=macrolide transporter subunit MacA;protein_id=WP_038825077.1;transl_table=11 NZ_CPUY01000009.1 RefSeq gene 168780 170729 . + . ID=gene-AD853_RS10435;Name=macB;gbkey=Gene;gene=macB;gene_biotype=protein_coding;locus_tag=AD853_RS10435;old_locus_tag=ERS008462_02114 NZ_CPUY01000009.1 Protein Homology CDS 168780 170729 . + 0 ID=cds-WP_038825075.1;Parent=gene-AD853_RS10435;Dbxref=GenBank:WP_038825075.1;Name=WP_038825075.1;Ontology_term=GO:0005524,GO:0022857,GO:1990195;gbkey=CDS;gene=macB;go_component=macrolide transmembrane transporter complex|1990195||IEA;go_function=ATP binding|0005524||IEA,transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004710702.1;locus_tag=AD853_RS10435;product=macrolide ABC transporter ATP-binding protein/permease MacB;protein_id=WP_038825075.1;transl_table=11 NZ_CPUY01000009.1 RefSeq gene 170993 171256 . - . ID=gene-AD853_RS10440;Name=cspD;gbkey=Gene;gene=cspD;gene_biotype=protein_coding;locus_tag=AD853_RS10440 NZ_CPUY01000009.1 Protein Homology CDS 170993 171256 . - 0 ID=cds-WP_002211350.1;Parent=gene-AD853_RS10440;Dbxref=GenBank:WP_002211350.1;Name=WP_002211350.1;gbkey=CDS;gene=cspD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004699966.1;locus_tag=AD853_RS10440;product=cold shock-like protein CspD;protein_id=WP_002211350.1;transl_table=11 NZ_CPUY01000009.1 RefSeq gene 171617 171937 . + . ID=gene-AD853_RS10445;Name=clpS;gbkey=Gene;gene=clpS;gene_biotype=protein_coding;locus_tag=AD853_RS10445;old_locus_tag=ERS008462_02116 NZ_CPUY01000009.1 Protein Homology CDS 171617 171937 . + 0 ID=cds-WP_002211349.1;Parent=gene-AD853_RS10445;Dbxref=GenBank:WP_002211349.1;Name=WP_002211349.1;Ontology_term=GO:0006508;gbkey=CDS;gene=clpS;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005128368.1;locus_tag=AD853_RS10445;product=ATP-dependent Clp protease adapter ClpS;protein_id=WP_002211349.1;transl_table=11 NZ_CPUY01000009.1 RefSeq gene 171963 174239 . + . ID=gene-AD853_RS10450;Name=clpA;gbkey=Gene;gene=clpA;gene_biotype=protein_coding;locus_tag=AD853_RS10450;old_locus_tag=ERS008462_02117 NZ_CPUY01000009.1 Protein Homology CDS 171963 174239 . + 0 ID=cds-WP_011192049.1;Parent=gene-AD853_RS10450;Dbxref=GenBank:WP_011192049.1;Name=WP_011192049.1;Ontology_term=GO:0043335,GO:0005524,GO:0016887;gbkey=CDS;gene=clpA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein unfolding|0043335||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004942592.1;locus_tag=AD853_RS10450;product=ATP-dependent Clp protease ATP-binding subunit ClpA;protein_id=WP_011192049.1;transl_table=11 ##sequence-region NZ_CPUY01000010.1 1 160169 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=633 NZ_CPUY01000010.1 RefSeq region 1 160169 . + . ID=NZ_CPUY01000010.1:1..160169;Dbxref=taxon:633;collection-date=1900/2008;country=South Africa;gbkey=Src;genome=genomic;isolation-source=not known;mol_type=genomic DNA;nat-host=pig;serovar=O:3;strain=IP32544 NZ_CPUY01000010.1 RefSeq gene 59 134 . + . ID=gene-AD853_RS10455;Name=AD853_RS10455;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD853_RS10455;old_locus_tag=ERS008462_02118 NZ_CPUY01000010.1 tRNAscan-SE tRNA 59 134 . + . ID=rna-AD853_RS10455;Parent=gene-AD853_RS10455;anticodon=(pos:92..94);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD853_RS10455;product=tRNA-Trp NZ_CPUY01000010.1 tRNAscan-SE exon 59 134 . + . ID=exon-AD853_RS10455-1;Parent=rna-AD853_RS10455;anticodon=(pos:92..94);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD853_RS10455;product=tRNA-Trp NZ_CPUY01000010.1 RefSeq gene 1125 2081 . + . ID=gene-AD853_RS10460;Name=ytfQ;gbkey=Gene;gene=ytfQ;gene_biotype=protein_coding;locus_tag=AD853_RS10460;old_locus_tag=ERS008462_02119 NZ_CPUY01000010.1 Protein Homology CDS 1125 2081 . + 0 ID=cds-WP_038823762.1;Parent=gene-AD853_RS10460;Dbxref=GenBank:WP_038823762.1;Name=WP_038823762.1;Ontology_term=GO:0042875,GO:0103116;gbkey=CDS;gene=ytfQ;go_function=ABC-type D-galactofuranose transporter|0103116||IEA;go_process=D-galactonate transmembrane transport|0042875||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005134480.1;locus_tag=AD853_RS10460;product=galactofuranose ABC transporter%2C galactofuranose-binding protein YtfQ;protein_id=WP_038823762.1;transl_table=11 NZ_CPUY01000010.1 RefSeq gene 2167 3657 . + . ID=gene-AD853_RS10465;Name=ytfR;gbkey=Gene;gene=ytfR;gene_biotype=protein_coding;locus_tag=AD853_RS10465;old_locus_tag=ERS008462_02120 NZ_CPUY01000010.1 Protein Homology CDS 2167 3657 . + 0 ID=cds-WP_002212023.1;Parent=gene-AD853_RS10465;Dbxref=GenBank:WP_002212023.1;Name=WP_002212023.1;Ontology_term=GO:0042875,GO:0103116;gbkey=CDS;gene=ytfR;go_function=ABC-type D-galactofuranose transporter|0103116||IEA;go_process=D-galactonate transmembrane transport|0042875||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212023.1;locus_tag=AD853_RS10465;product=galactofuranose ABC transporter%2C ATP-binding protein YtfR;protein_id=WP_002212023.1;transl_table=11 NZ_CPUY01000010.1 RefSeq gene 3669 4688 . + . ID=gene-AD853_RS10470;Name=ytfT;gbkey=Gene;gene=ytfT;gene_biotype=protein_coding;locus_tag=AD853_RS10470;old_locus_tag=ERS008462_02121 NZ_CPUY01000010.1 Protein Homology CDS 3669 4688 . + 0 ID=cds-WP_002212022.1;Parent=gene-AD853_RS10470;Dbxref=GenBank:WP_002212022.1;Name=WP_002212022.1;Ontology_term=GO:0042875,GO:0103116;gbkey=CDS;gene=ytfT;go_function=ABC-type D-galactofuranose transporter|0103116||IEA;go_process=D-galactonate transmembrane transport|0042875||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212022.1;locus_tag=AD853_RS10470;product=galactofuranose ABC transporter%2C ATP-binding protein YtfT;protein_id=WP_002212022.1;transl_table=11 NZ_CPUY01000010.1 RefSeq gene 4688 5668 . + . ID=gene-AD853_RS10475;Name=yjfF;gbkey=Gene;gene=yjfF;gene_biotype=protein_coding;locus_tag=AD853_RS10475;old_locus_tag=ERS008462_02122 NZ_CPUY01000010.1 Protein Homology CDS 4688 5668 . + 0 ID=cds-WP_050124598.1;Parent=gene-AD853_RS10475;Dbxref=GenBank:WP_050124598.1;Name=WP_050124598.1;Ontology_term=GO:0042875,GO:0103116,GO:0016020;gbkey=CDS;gene=yjfF;go_component=membrane|0016020||IEA;go_function=ABC-type D-galactofuranose transporter|0103116||IEA;go_process=D-galactonate transmembrane transport|0042875||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212021.1;locus_tag=AD853_RS10475;product=galactofuranose ABC transporter%2C permease protein YjfF;protein_id=WP_050124598.1;transl_table=11 NZ_CPUY01000010.1 RefSeq gene 5655 6536 . - . ID=gene-AD853_RS10480;Name=hdfR;gbkey=Gene;gene=hdfR;gene_biotype=protein_coding;locus_tag=AD853_RS10480;old_locus_tag=ERS008462_02123 NZ_CPUY01000010.1 Protein Homology CDS 5655 6536 . - 0 ID=cds-WP_002212020.1;Parent=gene-AD853_RS10480;Dbxref=GenBank:WP_002212020.1;Name=WP_002212020.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=hdfR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212020.1;locus_tag=AD853_RS10480;product=HTH-type transcriptional regulator HdfR;protein_id=WP_002212020.1;transl_table=11 NZ_CPUY01000010.1 RefSeq gene 6655 6993 . + . ID=gene-AD853_RS10485;Name=AD853_RS10485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS10485;old_locus_tag=ERS008462_02124 NZ_CPUY01000010.1 Protein Homology CDS 6655 6993 . + 0 ID=cds-WP_002212019.1;Parent=gene-AD853_RS10485;Dbxref=GenBank:WP_002212019.1;Name=WP_002212019.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312726.1;locus_tag=AD853_RS10485;product=MaoP family protein;protein_id=WP_002212019.1;transl_table=11 NZ_CPUY01000010.1 RefSeq pseudogene 7127 8640 . - . ID=gene-AD853_RS10490;Name=AD853_RS10490;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD853_RS10490;pseudo=true NZ_CPUY01000010.1 Protein Homology CDS 7127 8640 . - 0 ID=cds-AD853_RS10490;Parent=gene-AD853_RS10490;Note=frameshifted%3B internal stop;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212018.1;locus_tag=AD853_RS10490;product=YifB family Mg chelatase-like AAA ATPase;pseudo=true;transl_table=11 NZ_CPUY01000010.1 RefSeq gene 9024 9122 . + . ID=gene-AD853_RS20610;Name=ilvL;gbkey=Gene;gene=ilvL;gene_biotype=protein_coding;locus_tag=AD853_RS20610 NZ_CPUY01000010.1 Protein Homology CDS 9024 9122 . + 0 ID=cds-WP_002231873.1;Parent=gene-AD853_RS20610;Dbxref=GenBank:WP_002231873.1;Name=WP_002231873.1;Ontology_term=GO:0031556;gbkey=CDS;gene=ilvL;go_process=transcriptional attenuation by ribosome|0031556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312728.1;locus_tag=AD853_RS20610;product=ilv operon leader peptide;protein_id=WP_002231873.1;transl_table=11 NZ_CPUY01000010.1 RefSeq gene 9264 10910 . + . ID=gene-AD853_RS10495;Name=ilvG;gbkey=Gene;gene=ilvG;gene_biotype=protein_coding;locus_tag=AD853_RS10495;old_locus_tag=ERS008462_02127 NZ_CPUY01000010.1 Protein Homology CDS 9264 10910 . + 0 ID=cds-WP_002212017.1;Parent=gene-AD853_RS10495;Dbxref=GenBank:WP_002212017.1;Name=WP_002212017.1;Ontology_term=GO:0009082,GO:0000287,GO:0003984,GO:0030976,GO:0050660;gbkey=CDS;gene=ilvG;go_function=magnesium ion binding|0000287||IEA,acetolactate synthase activity|0003984||IEA,thiamine pyrophosphate binding|0030976||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212017.1;locus_tag=AD853_RS10495;product=acetolactate synthase 2 catalytic subunit;protein_id=WP_002212017.1;transl_table=11 NZ_CPUY01000010.1 RefSeq gene 10907 11164 . + . ID=gene-AD853_RS10500;Name=ilvM;gbkey=Gene;gene=ilvM;gene_biotype=protein_coding;locus_tag=AD853_RS10500;old_locus_tag=ERS008462_02128 NZ_CPUY01000010.1 Protein Homology CDS 10907 11164 . + 0 ID=cds-WP_002212016.1;Parent=gene-AD853_RS10500;Dbxref=GenBank:WP_002212016.1;Name=WP_002212016.1;gbkey=CDS;gene=ilvM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212016.1;locus_tag=AD853_RS10500;product=acetolactate synthase 2 small subunit;protein_id=WP_002212016.1;transl_table=11 NZ_CPUY01000010.1 RefSeq gene 11187 12113 . + . ID=gene-AD853_RS10505;Name=AD853_RS10505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS10505;old_locus_tag=ERS008462_02129 NZ_CPUY01000010.1 Protein Homology CDS 11187 12113 . + 0 ID=cds-WP_002212015.1;Parent=gene-AD853_RS10505;Dbxref=GenBank:WP_002212015.1;Name=WP_002212015.1;Ontology_term=GO:0009081,GO:0004084;gbkey=CDS;go_function=branched-chain-amino-acid transaminase activity|0004084||IEA;go_process=branched-chain amino acid metabolic process|0009081||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212015.1;locus_tag=AD853_RS10505;product=branched-chain amino acid transaminase;protein_id=WP_002212015.1;transl_table=11 NZ_CPUY01000010.1 RefSeq gene 12388 14238 . + . ID=gene-AD853_RS10510;Name=ilvD;gbkey=Gene;gene=ilvD;gene_biotype=protein_coding;locus_tag=AD853_RS10510;old_locus_tag=ERS008462_02130 NZ_CPUY01000010.1 Protein Homology CDS 12388 14238 . + 0 ID=cds-WP_002212014.1;Parent=gene-AD853_RS10510;Dbxref=GenBank:WP_002212014.1;Name=WP_002212014.1;Ontology_term=GO:0009082,GO:0004160;gbkey=CDS;gene=ilvD;go_function=dihydroxy-acid dehydratase activity|0004160||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133366.1;locus_tag=AD853_RS10510;product=dihydroxy-acid dehydratase;protein_id=WP_002212014.1;transl_table=11 NZ_CPUY01000010.1 RefSeq gene 14244 15788 . + . ID=gene-AD853_RS10515;Name=ilvA;gbkey=Gene;gene=ilvA;gene_biotype=protein_coding;locus_tag=AD853_RS10515;old_locus_tag=ERS008462_02131 NZ_CPUY01000010.1 Protein Homology CDS 14244 15788 . + 0 ID=cds-WP_002212013.1;Parent=gene-AD853_RS10515;Dbxref=GenBank:WP_002212013.1;Name=WP_002212013.1;Ontology_term=GO:0009097,GO:0004794;gbkey=CDS;gene=ilvA;go_function=threonine deaminase activity|0004794||IEA;go_process=isoleucine biosynthetic process|0009097||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010294667.1;locus_tag=AD853_RS10515;product=threonine ammonia-lyase%2C biosynthetic;protein_id=WP_002212013.1;transl_table=11 NZ_CPUY01000010.1 RefSeq gene 15919 16383 . - . ID=gene-AD853_RS10520;Name=AD853_RS10520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS10520;old_locus_tag=ERS008462_02132 NZ_CPUY01000010.1 Protein Homology CDS 15919 16383 . - 0 ID=cds-WP_011191484.1;Parent=gene-AD853_RS10520;Dbxref=GenBank:WP_011191484.1;Name=WP_011191484.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016583182.1;locus_tag=AD853_RS10520;product=DUF943 family protein;protein_id=WP_011191484.1;transl_table=11 NZ_CPUY01000010.1 RefSeq gene 16401 16865 . - . ID=gene-AD853_RS10525;Name=AD853_RS10525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS10525;old_locus_tag=ERS008462_02133 NZ_CPUY01000010.1 Protein Homology CDS 16401 16865 . - 0 ID=cds-WP_050102132.1;Parent=gene-AD853_RS10525;Dbxref=GenBank:WP_050102132.1;Name=WP_050102132.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011193247.1;locus_tag=AD853_RS10525;product=DUF943 family protein;protein_id=WP_050102132.1;transl_table=11 NZ_CPUY01000010.1 RefSeq pseudogene 16849 16911 . - . ID=gene-AD853_RS22660;Name=AD853_RS22660;end_range=16911,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD853_RS22660;partial=true;pseudo=true NZ_CPUY01000010.1 Protein Homology CDS 16849 16911 . - 0 ID=cds-AD853_RS22660;Parent=gene-AD853_RS22660;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=16911,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002230570.1;locus_tag=AD853_RS22660;partial=true;product=DUF3289 family protein;pseudo=true;transl_table=11 NZ_CPUY01000010.1 RefSeq gene 16945 17406 . - . ID=gene-AD853_RS10530;Name=AD853_RS10530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS10530;old_locus_tag=ERS008462_02134 NZ_CPUY01000010.1 Protein Homology CDS 16945 17406 . - 0 ID=cds-WP_002384511.1;Parent=gene-AD853_RS10530;Dbxref=GenBank:WP_002384511.1;Name=WP_002384511.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011193247.1;locus_tag=AD853_RS10530;product=DUF943 family protein;protein_id=WP_002384511.1;transl_table=11 NZ_CPUY01000010.1 RefSeq gene 17390 18268 . - . ID=gene-AD853_RS10535;Name=AD853_RS10535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS10535;old_locus_tag=ERS008462_02135 NZ_CPUY01000010.1 Protein Homology CDS 17390 18268 . - 0 ID=cds-WP_002228241.1;Parent=gene-AD853_RS10535;Dbxref=GenBank:WP_002228241.1;Name=WP_002228241.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012229054.1;locus_tag=AD853_RS10535;product=DUF3289 family protein;protein_id=WP_002228241.1;transl_table=11 NZ_CPUY01000010.1 RefSeq gene 18916 19125 . + . ID=gene-AD853_RS10540;Name=AD853_RS10540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS10540;old_locus_tag=ERS008462_02136 NZ_CPUY01000010.1 Protein Homology CDS 18916 19125 . + 0 ID=cds-WP_002212009.1;Parent=gene-AD853_RS10540;Dbxref=GenBank:WP_002212009.1;Name=WP_002212009.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212009.1;locus_tag=AD853_RS10540;product=hypothetical protein;protein_id=WP_002212009.1;transl_table=11 NZ_CPUY01000010.1 RefSeq gene 19180 20061 . - . ID=gene-AD853_RS10545;Name=ilvY;gbkey=Gene;gene=ilvY;gene_biotype=protein_coding;locus_tag=AD853_RS10545;old_locus_tag=ERS008462_02137 NZ_CPUY01000010.1 Protein Homology CDS 19180 20061 . - 0 ID=cds-WP_038824836.1;Parent=gene-AD853_RS10545;Dbxref=GenBank:WP_038824836.1;Name=WP_038824836.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=ilvY;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019080226.1;locus_tag=AD853_RS10545;product=HTH-type transcriptional activator IlvY;protein_id=WP_038824836.1;transl_table=11 NZ_CPUY01000010.1 RefSeq gene 20347 21825 . + . ID=gene-AD853_RS10550;Name=ilvC;gbkey=Gene;gene=ilvC;gene_biotype=protein_coding;locus_tag=AD853_RS10550;old_locus_tag=ERS008462_02138 NZ_CPUY01000010.1 Protein Homology CDS 20347 21825 . + 0 ID=cds-WP_011191486.1;Parent=gene-AD853_RS10550;Dbxref=GenBank:WP_011191486.1;Name=WP_011191486.1;Ontology_term=GO:0009082,GO:0004455;gbkey=CDS;gene=ilvC;go_function=ketol-acid reductoisomerase activity|0004455||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133363.1;locus_tag=AD853_RS10550;product=ketol-acid reductoisomerase;protein_id=WP_011191486.1;transl_table=11 NZ_CPUY01000010.1 RefSeq pseudogene 22005 22202 . + . ID=gene-AD853_RS22180;Name=AD853_RS22180;end_range=22202,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD853_RS22180;partial=true;pseudo=true NZ_CPUY01000010.1 Protein Homology CDS 22005 22202 . + 0 ID=cds-AD853_RS22180;Parent=gene-AD853_RS22180;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=22202,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212006.1;locus_tag=AD853_RS22180;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CPUY01000010.1 RefSeq gene 22413 23819 . + . ID=gene-AD853_RS21330;Name=AD853_RS21330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS21330;old_locus_tag=ERS008462_02139 NZ_CPUY01000010.1 Protein Homology CDS 22413 23819 . + 0 ID=cds-WP_080624447.1;Parent=gene-AD853_RS21330;Dbxref=GenBank:WP_080624447.1;Name=WP_080624447.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016261668.1;locus_tag=AD853_RS21330;product=S-type pyocin domain-containing protein;protein_id=WP_080624447.1;transl_table=11 NZ_CPUY01000010.1 RefSeq gene 23816 24076 . + . ID=gene-AD853_RS10570;Name=AD853_RS10570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS10570;old_locus_tag=ERS008462_02140 NZ_CPUY01000010.1 Protein Homology CDS 23816 24076 . + 0 ID=cds-WP_025382118.1;Parent=gene-AD853_RS10570;Dbxref=GenBank:WP_025382118.1;Name=WP_025382118.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005280221.1;locus_tag=AD853_RS10570;product=bacteriocin immunity protein;protein_id=WP_025382118.1;transl_table=11 NZ_CPUY01000010.1 RefSeq pseudogene 24175 24575 . + . ID=gene-AD853_RS10575;Name=AD853_RS10575;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD853_RS10575;old_locus_tag=ERS008462_02141;partial=true;pseudo=true;start_range=.,24175 NZ_CPUY01000010.1 Protein Homology CDS 24175 24575 . + 0 ID=cds-AD853_RS10575;Parent=gene-AD853_RS10575;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016261668.1;locus_tag=AD853_RS10575;partial=true;product=S-type pyocin domain-containing protein;pseudo=true;start_range=.,24175;transl_table=11 NZ_CPUY01000010.1 RefSeq gene 24575 24838 . + . ID=gene-AD853_RS10580;Name=AD853_RS10580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS10580;old_locus_tag=ERS008462_02142 NZ_CPUY01000010.1 Protein Homology CDS 24575 24838 . + 0 ID=cds-WP_038825243.1;Parent=gene-AD853_RS10580;Dbxref=GenBank:WP_038825243.1;Name=WP_038825243.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212004.1;locus_tag=AD853_RS10580;product=hypothetical protein;protein_id=WP_038825243.1;transl_table=11 NZ_CPUY01000010.1 RefSeq pseudogene 25100 25354 . + . ID=gene-AD853_RS22185;Name=AD853_RS22185;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD853_RS22185;pseudo=true NZ_CPUY01000010.1 Protein Homology CDS 25100 25354 . + 0 ID=cds-AD853_RS22185;Parent=gene-AD853_RS22185;Note=internal stop;Ontology_term=GO:0003676,GO:0004519,GO:0008270;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,endonuclease activity|0004519||IEA,zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002215823.1;locus_tag=AD853_RS22185;product=HNH endonuclease signature motif containing protein;pseudo=true;transl_table=11 NZ_CPUY01000010.1 RefSeq gene 25356 25613 . + . ID=gene-AD853_RS10590;Name=AD853_RS10590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS10590;old_locus_tag=ERS008462_02143 NZ_CPUY01000010.1 Protein Homology CDS 25356 25613 . + 0 ID=cds-WP_038825245.1;Parent=gene-AD853_RS10590;Dbxref=GenBank:WP_038825245.1;Name=WP_038825245.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212003.1;locus_tag=AD853_RS10590;product=bacteriocin immunity protein;protein_id=WP_038825245.1;transl_table=11 NZ_CPUY01000010.1 RefSeq gene 26173 26544 . + . ID=gene-AD853_RS10600;Name=AD853_RS10600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS10600;old_locus_tag=ERS008462_02144 NZ_CPUY01000010.1 Protein Homology CDS 26173 26544 . + 0 ID=cds-WP_033851795.1;Parent=gene-AD853_RS10600;Dbxref=GenBank:WP_033851795.1;Name=WP_033851795.1;Ontology_term=GO:0060567,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=negative regulation of termination of DNA-templated transcription|0060567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011191492.1;locus_tag=AD853_RS10600;product=antiterminator Q family protein;protein_id=WP_033851795.1;transl_table=11 NZ_CPUY01000010.1 RefSeq gene 27154 27489 . + . ID=gene-AD853_RS10605;Name=AD853_RS10605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS10605;old_locus_tag=ERS008462_02146 NZ_CPUY01000010.1 Protein Homology CDS 27154 27489 . + 0 ID=cds-WP_038825176.1;Parent=gene-AD853_RS10605;Dbxref=GenBank:WP_038825176.1;Name=WP_038825176.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011191493.1;locus_tag=AD853_RS10605;product=DUF2570 domain-containing protein;protein_id=WP_038825176.1;transl_table=11 NZ_CPUY01000010.1 RefSeq gene 27431 27688 . + . ID=gene-AD853_RS22740;Name=lysC;gbkey=Gene;gene=lysC;gene_biotype=protein_coding;locus_tag=AD853_RS22740;old_locus_tag=ERS008462_02147 NZ_CPUY01000010.1 Protein Homology CDS 27431 27688 . + 0 ID=cds-WP_033851677.1;Parent=gene-AD853_RS22740;Dbxref=GenBank:WP_033851677.1;Name=WP_033851677.1;gbkey=CDS;gene=lysC;inference=COORDINATES: protein motif:HMM:NF048206.1;locus_tag=AD853_RS22740;product=Rz1-like lysis system protein LysC;protein_id=WP_033851677.1;transl_table=11 NZ_CPUY01000010.1 RefSeq gene 27748 28428 . - . ID=gene-AD853_RS10610;Name=AD853_RS10610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS10610;old_locus_tag=ERS008462_02148 NZ_CPUY01000010.1 Protein Homology CDS 27748 28428 . - 0 ID=cds-WP_445530160.1;Parent=gene-AD853_RS10610;Dbxref=GenBank:WP_445530160.1;Name=WP_445530160.1;Ontology_term=GO:0006457,GO:0043711,GO:0030288;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_process=protein folding|0006457||IEA,pilus organization|0043711||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004714225.1;locus_tag=AD853_RS10610;product=fimbrial biogenesis chaperone;protein_id=WP_445530160.1;transl_table=11 NZ_CPUY01000010.1 RefSeq gene 28532 29899 . - . ID=gene-AD853_RS10615;Name=stbD;gbkey=Gene;gene=stbD;gene_biotype=protein_coding;locus_tag=AD853_RS10615;old_locus_tag=ERS008462_02149 NZ_CPUY01000010.1 Protein Homology CDS 28532 29899 . - 0 ID=cds-WP_072080812.1;Parent=gene-AD853_RS10615;Dbxref=GenBank:WP_072080812.1;Name=WP_072080812.1;gbkey=CDS;gene=stbD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212000.1;locus_tag=AD853_RS10615;product=fimbrial usher protein StbD;protein_id=WP_072080812.1;transl_table=11 NZ_CPUY01000010.1 RefSeq pseudogene 29935 32586 . - . ID=gene-AD853_RS10620;Name=AD853_RS10620;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD853_RS10620;old_locus_tag=ERS008462_02150;pseudo=true NZ_CPUY01000010.1 Protein Homology CDS 29935 32586 . - 0 ID=cds-AD853_RS10620;Parent=gene-AD853_RS10620;Note=internal stop;Ontology_term=GO:0009297,GO:0015473,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=fimbrial usher porin activity|0015473||IEA;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016588590.1;locus_tag=AD853_RS10620;product=fimbria/pilus outer membrane usher protein;pseudo=true;transl_table=11 NZ_CPUY01000010.1 RefSeq gene 32614 33345 . - . ID=gene-AD853_RS10625;Name=AD853_RS10625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS10625;old_locus_tag=ERS008462_02152 NZ_CPUY01000010.1 Protein Homology CDS 32614 33345 . - 0 ID=cds-WP_038825173.1;Parent=gene-AD853_RS10625;Dbxref=GenBank:WP_038825173.1;Name=WP_038825173.1;Ontology_term=GO:0006457,GO:0043711,GO:0030288;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_process=protein folding|0006457||IEA,pilus organization|0043711||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211998.1;locus_tag=AD853_RS10625;product=fimbrial biogenesis chaperone;protein_id=WP_038825173.1;transl_table=11 NZ_CPUY01000010.1 RefSeq gene 33409 33939 . - . ID=gene-AD853_RS10630;Name=AD853_RS10630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS10630;old_locus_tag=ERS008462_02153 NZ_CPUY01000010.1 Protein Homology CDS 33409 33939 . - 0 ID=cds-WP_002211997.1;Parent=gene-AD853_RS10630;Dbxref=GenBank:WP_002211997.1;Name=WP_002211997.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211997.1;locus_tag=AD853_RS10630;product=fimbrial protein;protein_id=WP_002211997.1;transl_table=11 NZ_CPUY01000010.1 RefSeq gene 34731 35522 . - . ID=gene-AD853_RS10640;Name=AD853_RS10640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS10640;old_locus_tag=ERS008462_02154 NZ_CPUY01000010.1 Protein Homology CDS 34731 35522 . - 0 ID=cds-WP_011191496.1;Parent=gene-AD853_RS10640;Dbxref=GenBank:WP_011191496.1;Name=WP_011191496.1;Ontology_term=GO:0017186,GO:0016603;gbkey=CDS;go_function=glutaminyl-peptide cyclotransferase activity|0016603||IEA;go_process=peptidyl-pyroglutamic acid biosynthetic process%2C using glutaminyl-peptide cyclotransferase|0017186||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211996.1;locus_tag=AD853_RS10640;product=glutaminyl-peptide cyclotransferase;protein_id=WP_011191496.1;transl_table=11 NZ_CPUY01000010.1 RefSeq gene 35750 36031 . - . ID=gene-AD853_RS10645;Name=ppiC;gbkey=Gene;gene=ppiC;gene_biotype=protein_coding;locus_tag=AD853_RS10645;old_locus_tag=ERS008462_02155 NZ_CPUY01000010.1 Protein Homology CDS 35750 36031 . - 0 ID=cds-WP_002211995.1;Parent=gene-AD853_RS10645;Dbxref=GenBank:WP_002211995.1;Name=WP_002211995.1;gbkey=CDS;gene=ppiC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004721654.1;locus_tag=AD853_RS10645;product=peptidylprolyl isomerase PpiC;protein_id=WP_002211995.1;transl_table=11 NZ_CPUY01000010.1 RefSeq gene 36051 36236 . - . ID=gene-AD853_RS10650;Name=AD853_RS10650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS10650 NZ_CPUY01000010.1 Protein Homology CDS 36051 36236 . - 0 ID=cds-WP_002215828.1;Parent=gene-AD853_RS10650;Dbxref=GenBank:WP_002215828.1;Name=WP_002215828.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002215828.1;locus_tag=AD853_RS10650;product=hypothetical protein;protein_id=WP_002215828.1;transl_table=11 NZ_CPUY01000010.1 RefSeq gene 36235 38256 . + . ID=gene-AD853_RS10655;Name=rep;gbkey=Gene;gene=rep;gene_biotype=protein_coding;locus_tag=AD853_RS10655;old_locus_tag=ERS008462_02156 NZ_CPUY01000010.1 Protein Homology CDS 36235 38256 . + 0 ID=cds-WP_038823766.1;Parent=gene-AD853_RS10655;Dbxref=GenBank:WP_038823766.1;Name=WP_038823766.1;Ontology_term=GO:0006260,GO:0003678;gbkey=CDS;gene=rep;go_function=DNA helicase activity|0003678||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012104296.1;locus_tag=AD853_RS10655;product=DNA helicase Rep;protein_id=WP_038823766.1;transl_table=11 NZ_CPUY01000010.1 RefSeq gene 38424 39917 . - . ID=gene-AD853_RS10660;Name=ppx;gbkey=Gene;gene=ppx;gene_biotype=protein_coding;locus_tag=AD853_RS10660;old_locus_tag=ERS008462_02157 NZ_CPUY01000010.1 Protein Homology CDS 38424 39917 . - 0 ID=cds-WP_038823772.1;Parent=gene-AD853_RS10660;Dbxref=GenBank:WP_038823772.1;Name=WP_038823772.1;Ontology_term=GO:0006798,GO:0000287,GO:0004309;gbkey=CDS;gene=ppx;go_function=magnesium ion binding|0000287||IEA,exopolyphosphatase activity|0004309||IEA;go_process=polyphosphate catabolic process|0006798||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004704162.1;locus_tag=AD853_RS10660;product=exopolyphosphatase;protein_id=WP_038823772.1;transl_table=11 NZ_CPUY01000010.1 RefSeq gene 39924 41210 . - . ID=gene-AD853_RS10665;Name=rhlB;gbkey=Gene;gene=rhlB;gene_biotype=protein_coding;locus_tag=AD853_RS10665;old_locus_tag=ERS008462_02158 NZ_CPUY01000010.1 Protein Homology CDS 39924 41210 . - 0 ID=cds-WP_002228177.1;Parent=gene-AD853_RS10665;Dbxref=GenBank:WP_002228177.1;Name=WP_002228177.1;Ontology_term=GO:0003676,GO:0003724,GO:0005524;gbkey=CDS;gene=rhlB;go_function=nucleic acid binding|0003676||IEA,RNA helicase activity|0003724||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002228177.1;locus_tag=AD853_RS10665;product=ATP-dependent RNA helicase RhlB;protein_id=WP_002228177.1;transl_table=11 NZ_CPUY01000010.1 RefSeq gene 41329 41655 . + . ID=gene-AD853_RS10670;Name=trxA;gbkey=Gene;gene=trxA;gene_biotype=protein_coding;locus_tag=AD853_RS10670;old_locus_tag=ERS008462_02159 NZ_CPUY01000010.1 Protein Homology CDS 41329 41655 . + 0 ID=cds-WP_002211990.1;Parent=gene-AD853_RS10670;Dbxref=GenBank:WP_002211990.1;Name=WP_002211990.1;Ontology_term=GO:0045454,GO:0015035;gbkey=CDS;gene=trxA;go_function=protein-disulfide reductase activity|0015035||IEA;go_process=cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011906449.1;locus_tag=AD853_RS10670;product=thioredoxin TrxA;protein_id=WP_002211990.1;transl_table=11 NZ_CPUY01000010.1 RefSeq gene 42135 43394 . + . ID=gene-AD853_RS10675;Name=rho;gbkey=Gene;gene=rho;gene_biotype=protein_coding;locus_tag=AD853_RS10675;old_locus_tag=ERS008462_02160 NZ_CPUY01000010.1 Protein Homology CDS 42135 43394 . + 0 ID=cds-WP_002211989.1;Parent=gene-AD853_RS10675;Dbxref=GenBank:WP_002211989.1;Name=WP_002211989.1;Ontology_term=GO:0006353,GO:0003723,GO:0005524,GO:0008186;gbkey=CDS;gene=rho;go_function=RNA binding|0003723||IEA,ATP binding|0005524||IEA,ATP-dependent activity%2C acting on RNA|0008186||IEA;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017492510.1;locus_tag=AD853_RS10675;product=transcription termination factor Rho;protein_id=WP_002211989.1;transl_table=11 NZ_CPUY01000010.1 RefSeq gene 43913 45010 . + . ID=gene-AD853_RS10680;Name=wecA;gbkey=Gene;gene=wecA;gene_biotype=protein_coding;locus_tag=AD853_RS10680;old_locus_tag=ERS008462_02161 NZ_CPUY01000010.1 Protein Homology CDS 43913 45010 . + 0 ID=cds-WP_071990107.1;Parent=gene-AD853_RS10680;Dbxref=GenBank:WP_071990107.1;Name=WP_071990107.1;Ontology_term=GO:0009103,GO:0009246,GO:0000287,GO:0016780,GO:0030145,GO:0036380,GO:0009276,GO:0016020;gbkey=CDS;gene=wecA;go_component=Gram-negative-bacterium-type cell wall|0009276||IEA,membrane|0016020||IEA;go_function=magnesium ion binding|0000287||IEA,phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA,manganese ion binding|0030145||IEA,UDP-N-acetylglucosamine-undecaprenyl-phosphate N-acetylglucosaminephosphotransferase activity|0036380||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA,enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019080213.1;locus_tag=AD853_RS10680;product=UDP-N-acetylglucosamine--undecaprenyl-phosphate N-acetylglucosaminephosphotransferase;protein_id=WP_071990107.1;transl_table=11 NZ_CPUY01000010.1 RefSeq gene 45031 46107 . + . ID=gene-AD853_RS10685;Name=wzzE;gbkey=Gene;gene=wzzE;gene_biotype=protein_coding;locus_tag=AD853_RS10685;old_locus_tag=ERS008462_02162 NZ_CPUY01000010.1 Protein Homology CDS 45031 46107 . + 0 ID=cds-WP_038823769.1;Parent=gene-AD853_RS10685;Dbxref=GenBank:WP_038823769.1;Name=WP_038823769.1;Ontology_term=GO:0009103,GO:0009246,GO:0016020;gbkey=CDS;gene=wzzE;go_component=membrane|0016020||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA,enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002226022.1;locus_tag=AD853_RS10685;product=ECA polysaccharide chain length modulation protein;protein_id=WP_038823769.1;transl_table=11 NZ_CPUY01000010.1 RefSeq gene 46439 47569 . + . ID=gene-AD853_RS10690;Name=wecB;gbkey=Gene;gene=wecB;gene_biotype=protein_coding;locus_tag=AD853_RS10690;old_locus_tag=ERS008462_02163 NZ_CPUY01000010.1 Protein Homology CDS 46439 47569 . + 0 ID=cds-WP_011191498.1;Parent=gene-AD853_RS10690;Dbxref=GenBank:WP_011191498.1;Name=WP_011191498.1;Ontology_term=GO:0008761;gbkey=CDS;gene=wecB;go_function=UDP-N-acetylglucosamine 2-epimerase activity|0008761||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211986.1;locus_tag=AD853_RS10690;product=non-hydrolyzing UDP-N-acetylglucosamine 2-epimerase;protein_id=WP_011191498.1;transl_table=11 NZ_CPUY01000010.1 RefSeq gene 47566 48828 . + . ID=gene-AD853_RS10695;Name=wecC;gbkey=Gene;gene=wecC;gene_biotype=protein_coding;locus_tag=AD853_RS10695;old_locus_tag=ERS008462_02164 NZ_CPUY01000010.1 Protein Homology CDS 47566 48828 . + 0 ID=cds-WP_002211985.1;Parent=gene-AD853_RS10695;Dbxref=GenBank:WP_002211985.1;Name=WP_002211985.1;Ontology_term=GO:0009246,GO:0051287,GO:0089714;gbkey=CDS;gene=wecC;go_function=NAD binding|0051287||IEA,UDP-N-acetyl-D-mannosamine dehydrogenase activity|0089714||IEA;go_process=enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462811.1;locus_tag=AD853_RS10695;product=UDP-N-acetyl-D-mannosamine dehydrogenase;protein_id=WP_002211985.1;transl_table=11 NZ_CPUY01000010.1 RefSeq gene 48819 49892 . + . ID=gene-AD853_RS10700;Name=rffG;gbkey=Gene;gene=rffG;gene_biotype=protein_coding;locus_tag=AD853_RS10700;old_locus_tag=ERS008462_02165 NZ_CPUY01000010.1 Protein Homology CDS 48819 49892 . + 0 ID=cds-WP_172601537.1;Parent=gene-AD853_RS10700;Dbxref=GenBank:WP_172601537.1;Name=WP_172601537.1;Ontology_term=GO:0009225,GO:0008460;gbkey=CDS;gene=rffG;go_function=dTDP-glucose 4%2C6-dehydratase activity|0008460||IEA;go_process=nucleotide-sugar metabolic process|0009225||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004950882.1;locus_tag=AD853_RS10700;product=dTDP-glucose 4%2C6-dehydratase;protein_id=WP_172601537.1;transl_table=11 NZ_CPUY01000010.1 RefSeq gene 50187 51068 . + . ID=gene-AD853_RS10705;Name=rfbA;gbkey=Gene;gene=rfbA;gene_biotype=protein_coding;locus_tag=AD853_RS10705;old_locus_tag=ERS008462_02166 NZ_CPUY01000010.1 Protein Homology CDS 50187 51068 . + 0 ID=cds-WP_002211983.1;Parent=gene-AD853_RS10705;Dbxref=GenBank:WP_002211983.1;Name=WP_002211983.1;Ontology_term=GO:0000271,GO:0019305,GO:0008879;gbkey=CDS;gene=rfbA;go_function=glucose-1-phosphate thymidylyltransferase activity|0008879||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA,dTDP-rhamnose biosynthetic process|0019305||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418236.1;locus_tag=AD853_RS10705;product=glucose-1-phosphate thymidylyltransferase RfbA;protein_id=WP_002211983.1;transl_table=11 NZ_CPUY01000010.1 RefSeq gene 51046 51783 . + . ID=gene-AD853_RS10710;Name=rffC;gbkey=Gene;gene=rffC;gene_biotype=protein_coding;gene_synonym=wecD;locus_tag=AD853_RS10710;old_locus_tag=ERS008462_02167 NZ_CPUY01000010.1 Protein Homology CDS 51046 51783 . + 0 ID=cds-WP_002211982.1;Parent=gene-AD853_RS10710;Dbxref=GenBank:WP_002211982.1;Name=WP_002211982.1;Ontology_term=GO:0008080;gbkey=CDS;gene=rffC;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211982.1;locus_tag=AD853_RS10710;product=dTDP-4-amino-4%2C6-dideoxy-D-galactose acyltransferase;protein_id=WP_002211982.1;transl_table=11 NZ_CPUY01000010.1 RefSeq gene 51785 52915 . + . ID=gene-AD853_RS10715;Name=rffA;gbkey=Gene;gene=rffA;gene_biotype=protein_coding;gene_synonym=fcnA,wecE;locus_tag=AD853_RS10715;old_locus_tag=ERS008462_02168 NZ_CPUY01000010.1 Protein Homology CDS 51785 52915 . + 0 ID=cds-WP_038823770.1;Parent=gene-AD853_RS10715;Dbxref=GenBank:WP_038823770.1;Name=WP_038823770.1;Ontology_term=GO:0009246,GO:0019180;gbkey=CDS;gene=rffA;go_function=dTDP-4-amino-4%2C6-dideoxygalactose transaminase activity|0019180||IEA;go_process=enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013649042.1;locus_tag=AD853_RS10715;product=dTDP-4-amino-4%2C6-dideoxygalactose transaminase;protein_id=WP_038823770.1;transl_table=11 NZ_CPUY01000010.1 RefSeq gene 52917 54173 . + . ID=gene-AD853_RS10720;Name=wzxE;gbkey=Gene;gene=wzxE;gene_biotype=protein_coding;locus_tag=AD853_RS10720;old_locus_tag=ERS008462_02169 NZ_CPUY01000010.1 Protein Homology CDS 52917 54173 . + 0 ID=cds-WP_011191502.1;Parent=gene-AD853_RS10720;Dbxref=GenBank:WP_011191502.1;Name=WP_011191502.1;Ontology_term=GO:0009246,GO:0016020;gbkey=CDS;gene=wzxE;go_component=membrane|0016020||IEA;go_process=enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304736.1;locus_tag=AD853_RS10720;product=lipid III flippase WzxE;protein_id=WP_011191502.1;transl_table=11 NZ_CPUY01000010.1 RefSeq gene 54196 55281 . + . ID=gene-AD853_RS10725;Name=AD853_RS10725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS10725;old_locus_tag=ERS008462_02170 NZ_CPUY01000010.1 Protein Homology CDS 54196 55281 . + 0 ID=cds-WP_011191503.1;Parent=gene-AD853_RS10725;Dbxref=GenBank:WP_011191503.1;Name=WP_011191503.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011906447.1;locus_tag=AD853_RS10725;product=TDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase;protein_id=WP_011191503.1;transl_table=11 NZ_CPUY01000010.1 RefSeq gene 55278 56642 . + . ID=gene-AD853_RS10730;Name=wzyE;gbkey=Gene;gene=wzyE;gene_biotype=protein_coding;locus_tag=AD853_RS10730;old_locus_tag=ERS008462_02171 NZ_CPUY01000010.1 Protein Homology CDS 55278 56642 . + 0 ID=cds-WP_002211978.1;Parent=gene-AD853_RS10730;Dbxref=GenBank:WP_002211978.1;Name=WP_002211978.1;Ontology_term=GO:0009246,GO:0016020;gbkey=CDS;gene=wzyE;go_component=membrane|0016020||IEA;go_process=enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211978.1;locus_tag=AD853_RS10730;product=ECA oligosaccharide polymerase;protein_id=WP_002211978.1;transl_table=11 NZ_CPUY01000010.1 RefSeq gene 56651 57391 . + . ID=gene-AD853_RS10735;Name=wecG;gbkey=Gene;gene=wecG;gene_biotype=protein_coding;locus_tag=AD853_RS10735;old_locus_tag=ERS008462_02172 NZ_CPUY01000010.1 Protein Homology CDS 56651 57391 . + 0 ID=cds-WP_011191504.1;Parent=gene-AD853_RS10735;Dbxref=GenBank:WP_011191504.1;Name=WP_011191504.1;Ontology_term=GO:0047241;gbkey=CDS;gene=wecG;go_function=lipopolysaccharide N-acetylmannosaminouronosyltransferase activity|0047241||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211977.1;locus_tag=AD853_RS10735;product=lipopolysaccharide N-acetylmannosaminouronosyltransferase;protein_id=WP_011191504.1;transl_table=11 NZ_CPUY01000010.1 RefSeq gene 57920 59311 . + . ID=gene-AD853_RS10740;Name=thrP;gbkey=Gene;gene=thrP;gene_biotype=protein_coding;gene_synonym=yifK;locus_tag=AD853_RS10740;old_locus_tag=ERS008462_02173 NZ_CPUY01000010.1 Protein Homology CDS 57920 59311 . + 0 ID=cds-WP_038823815.1;Parent=gene-AD853_RS10740;Dbxref=GenBank:WP_038823815.1;Name=WP_038823815.1;Ontology_term=GO:0015194,GO:0015195;gbkey=CDS;gene=thrP;go_function=L-serine transmembrane transporter activity|0015194||IEA,L-threonine transmembrane transporter activity|0015195||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012104302.1;locus_tag=AD853_RS10740;product=bifunctional threonine/serine APC transporter ThrP;protein_id=WP_038823815.1;transl_table=11 NZ_CPUY01000010.1 RefSeq gene 59460 59536 . + . ID=gene-AD853_RS10745;Name=AD853_RS10745;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD853_RS10745;old_locus_tag=ERS008462_02174 NZ_CPUY01000010.1 tRNAscan-SE tRNA 59460 59536 . + . ID=rna-AD853_RS10745;Parent=gene-AD853_RS10745;anticodon=(pos:59494..59496);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD853_RS10745;product=tRNA-Arg NZ_CPUY01000010.1 tRNAscan-SE exon 59460 59536 . + . ID=exon-AD853_RS10745-1;Parent=rna-AD853_RS10745;anticodon=(pos:59494..59496);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD853_RS10745;product=tRNA-Arg NZ_CPUY01000010.1 RefSeq gene 59620 59695 . + . ID=gene-AD853_RS10750;Name=AD853_RS10750;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD853_RS10750;old_locus_tag=ERS008462_02175 NZ_CPUY01000010.1 tRNAscan-SE tRNA 59620 59695 . + . ID=rna-AD853_RS10750;Parent=gene-AD853_RS10750;anticodon=(pos:59653..59655);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD853_RS10750;product=tRNA-His NZ_CPUY01000010.1 tRNAscan-SE exon 59620 59695 . + . ID=exon-AD853_RS10750-1;Parent=rna-AD853_RS10750;anticodon=(pos:59653..59655);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD853_RS10750;product=tRNA-His NZ_CPUY01000010.1 RefSeq gene 59712 59798 . + . ID=gene-AD853_RS10755;Name=AD853_RS10755;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD853_RS10755;old_locus_tag=ERS008462_02176 NZ_CPUY01000010.1 tRNAscan-SE tRNA 59712 59798 . + . ID=rna-AD853_RS10755;Parent=gene-AD853_RS10755;anticodon=(pos:59746..59748);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD853_RS10755;product=tRNA-Leu NZ_CPUY01000010.1 tRNAscan-SE exon 59712 59798 . + . ID=exon-AD853_RS10755-1;Parent=rna-AD853_RS10755;anticodon=(pos:59746..59748);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD853_RS10755;product=tRNA-Leu NZ_CPUY01000010.1 RefSeq gene 59874 59950 . + . ID=gene-AD853_RS10760;Name=AD853_RS10760;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD853_RS10760;old_locus_tag=ERS008462_02177 NZ_CPUY01000010.1 tRNAscan-SE tRNA 59874 59950 . + . ID=rna-AD853_RS10760;Parent=gene-AD853_RS10760;anticodon=(pos:59908..59910);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD853_RS10760;product=tRNA-Pro NZ_CPUY01000010.1 tRNAscan-SE exon 59874 59950 . + . ID=exon-AD853_RS10760-1;Parent=rna-AD853_RS10760;anticodon=(pos:59908..59910);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD853_RS10760;product=tRNA-Pro NZ_CPUY01000010.1 RefSeq gene 60775 61995 . - . ID=gene-AD853_RS10765;Name=hemY;gbkey=Gene;gene=hemY;gene_biotype=protein_coding;locus_tag=AD853_RS10765;old_locus_tag=ERS008462_02180 NZ_CPUY01000010.1 Protein Homology CDS 60775 61995 . - 0 ID=cds-WP_011191505.1;Parent=gene-AD853_RS10765;Dbxref=GenBank:WP_011191505.1;Name=WP_011191505.1;Ontology_term=GO:0042168,GO:0005515,GO:0016020;gbkey=CDS;gene=hemY;go_component=membrane|0016020||IEA;go_function=protein binding|0005515||IEA;go_process=heme metabolic process|0042168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012104303.1;locus_tag=AD853_RS10765;product=protoheme IX biogenesis protein HemY;protein_id=WP_011191505.1;transl_table=11 NZ_CPUY01000010.1 RefSeq gene 61998 63122 . - . ID=gene-AD853_RS10770;Name=hemX;gbkey=Gene;gene=hemX;gene_biotype=protein_coding;locus_tag=AD853_RS10770;old_locus_tag=ERS008462_02181 NZ_CPUY01000010.1 Protein Homology CDS 61998 63122 . - 0 ID=cds-WP_002211463.1;Parent=gene-AD853_RS10770;Dbxref=GenBank:WP_002211463.1;Name=WP_002211463.1;gbkey=CDS;gene=hemX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011191506.1;locus_tag=AD853_RS10770;product=uroporphyrinogen-III C-methyltransferase;protein_id=WP_002211463.1;transl_table=11 NZ_CPUY01000010.1 RefSeq gene 63153 63902 . - . ID=gene-AD853_RS10775;Name=hemD;gbkey=Gene;gene=hemD;gene_biotype=protein_coding;locus_tag=AD853_RS10775;old_locus_tag=ERS008462_02182 NZ_CPUY01000010.1 Protein Homology CDS 63153 63902 . - 0 ID=cds-WP_002211464.1;Parent=gene-AD853_RS10775;Dbxref=GenBank:WP_002211464.1;Name=WP_002211464.1;Ontology_term=GO:0006780,GO:0004852;gbkey=CDS;gene=hemD;go_function=uroporphyrinogen-III synthase activity|0004852||IEA;go_process=uroporphyrinogen III biosynthetic process|0006780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211464.1;locus_tag=AD853_RS10775;product=uroporphyrinogen-III synthase;protein_id=WP_002211464.1;transl_table=11 NZ_CPUY01000010.1 RefSeq gene 63899 64840 . - . ID=gene-AD853_RS10780;Name=hemC;gbkey=Gene;gene=hemC;gene_biotype=protein_coding;locus_tag=AD853_RS10780;old_locus_tag=ERS008462_02183 NZ_CPUY01000010.1 Protein Homology CDS 63899 64840 . - 0 ID=cds-WP_002211465.1;Parent=gene-AD853_RS10780;Dbxref=GenBank:WP_002211465.1;Name=WP_002211465.1;Ontology_term=GO:0033014,GO:0004418;gbkey=CDS;gene=hemC;go_function=hydroxymethylbilane synthase activity|0004418||IEA;go_process=tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211465.1;locus_tag=AD853_RS10780;product=hydroxymethylbilane synthase;protein_id=WP_002211465.1;transl_table=11 NZ_CPUY01000010.1 RefSeq gene 65061 65261 . - . ID=gene-AD853_RS20625;Name=AD853_RS20625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS20625 NZ_CPUY01000010.1 Protein Homology CDS 65061 65261 . - 0 ID=cds-WP_002211467.1;Parent=gene-AD853_RS20625;Dbxref=GenBank:WP_002211467.1;Name=WP_002211467.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211467.1;locus_tag=AD853_RS20625;product=hypothetical protein;protein_id=WP_002211467.1;transl_table=11 NZ_CPUY01000010.1 RefSeq gene 65334 67886 . + . ID=gene-AD853_RS10785;Name=AD853_RS10785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS10785;old_locus_tag=ERS008462_02184 NZ_CPUY01000010.1 Protein Homology CDS 65334 67886 . + 0 ID=cds-WP_038400660.1;Parent=gene-AD853_RS10785;Dbxref=GenBank:WP_038400660.1;Name=WP_038400660.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015683523.1;locus_tag=AD853_RS10785;product=class I adenylate cyclase;protein_id=WP_038400660.1;transl_table=11 NZ_CPUY01000010.1 RefSeq gene 67965 68855 . - . ID=gene-AD853_RS10790;Name=AD853_RS10790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS10790;old_locus_tag=ERS008462_02185 NZ_CPUY01000010.1 GeneMarkS-2+ CDS 67965 68855 . - 0 ID=cds-WP_038824067.1;Parent=gene-AD853_RS10790;Dbxref=GenBank:WP_038824067.1;Name=WP_038824067.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AD853_RS10790;product=hypothetical protein;protein_id=WP_038824067.1;transl_table=11 NZ_CPUY01000010.1 RefSeq gene 69151 69474 . - . ID=gene-AD853_RS10795;Name=cyaY;gbkey=Gene;gene=cyaY;gene_biotype=protein_coding;locus_tag=AD853_RS10795;old_locus_tag=ERS008462_02186 NZ_CPUY01000010.1 Protein Homology CDS 69151 69474 . - 0 ID=cds-WP_038824065.1;Parent=gene-AD853_RS10795;Dbxref=GenBank:WP_038824065.1;Name=WP_038824065.1;Ontology_term=GO:0016226,GO:0005506;gbkey=CDS;gene=cyaY;go_function=iron ion binding|0005506||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304732.1;locus_tag=AD853_RS10795;product=iron donor protein CyaY;protein_id=WP_038824065.1;transl_table=11 NZ_CPUY01000010.1 RefSeq gene 69587 69787 . + . ID=gene-AD853_RS10800;Name=lptM;gbkey=Gene;gene=lptM;gene_biotype=protein_coding;gene_synonym=yifL;locus_tag=AD853_RS10800;old_locus_tag=ERS008462_02187 NZ_CPUY01000010.1 Protein Homology CDS 69587 69787 . + 0 ID=cds-WP_032466000.1;Parent=gene-AD853_RS10800;Dbxref=GenBank:WP_032466000.1;Name=WP_032466000.1;gbkey=CDS;gene=lptM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211470.1;locus_tag=AD853_RS10800;product=LPS translocon maturation chaperone LptM;protein_id=WP_032466000.1;transl_table=11 NZ_CPUY01000010.1 RefSeq gene 69988 70812 . + . ID=gene-AD853_RS10805;Name=dapF;gbkey=Gene;gene=dapF;gene_biotype=protein_coding;locus_tag=AD853_RS10805;old_locus_tag=ERS008462_02188 NZ_CPUY01000010.1 Protein Homology CDS 69988 70812 . + 0 ID=cds-WP_002211471.1;Parent=gene-AD853_RS10805;Dbxref=GenBank:WP_002211471.1;Name=WP_002211471.1;Ontology_term=GO:0009089,GO:0008837;gbkey=CDS;gene=dapF;go_function=diaminopimelate epimerase activity|0008837||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133314.1;locus_tag=AD853_RS10805;product=diaminopimelate epimerase;protein_id=WP_002211471.1;transl_table=11 NZ_CPUY01000010.1 RefSeq gene 70877 71581 . + . ID=gene-AD853_RS10810;Name=AD853_RS10810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS10810;old_locus_tag=ERS008462_02189 NZ_CPUY01000010.1 Protein Homology CDS 70877 71581 . + 0 ID=cds-WP_002211472.1;Parent=gene-AD853_RS10810;Dbxref=GenBank:WP_002211472.1;Name=WP_002211472.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211472.1;locus_tag=AD853_RS10810;product=DUF484 domain-containing protein;protein_id=WP_002211472.1;transl_table=11 NZ_CPUY01000010.1 RefSeq gene 71578 72489 . + . ID=gene-AD853_RS10815;Name=xerC;gbkey=Gene;gene=xerC;gene_biotype=protein_coding;locus_tag=AD853_RS10815;old_locus_tag=ERS008462_02190 NZ_CPUY01000010.1 Protein Homology CDS 71578 72489 . + 0 ID=cds-WP_002211473.1;Parent=gene-AD853_RS10815;Dbxref=GenBank:WP_002211473.1;Name=WP_002211473.1;Ontology_term=GO:0006310,GO:0007059,GO:0015074,GO:0051301,GO:0003677;gbkey=CDS;gene=xerC;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,chromosome segregation|0007059||IEA,DNA integration|0015074||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011191512.1;locus_tag=AD853_RS10815;product=tyrosine recombinase XerC;protein_id=WP_002211473.1;transl_table=11 NZ_CPUY01000010.1 RefSeq gene 72489 73205 . + . ID=gene-AD853_RS10820;Name=yigB;gbkey=Gene;gene=yigB;gene_biotype=protein_coding;locus_tag=AD853_RS10820;old_locus_tag=ERS008462_02191 NZ_CPUY01000010.1 Protein Homology CDS 72489 73205 . + 0 ID=cds-WP_038824064.1;Parent=gene-AD853_RS10820;Dbxref=GenBank:WP_038824064.1;Name=WP_038824064.1;gbkey=CDS;gene=yigB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011815342.1;locus_tag=AD853_RS10820;product=5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB;protein_id=WP_038824064.1;transl_table=11 NZ_CPUY01000010.1 RefSeq gene 73304 75466 . + . ID=gene-AD853_RS10825;Name=uvrD;gbkey=Gene;gene=uvrD;gene_biotype=protein_coding;gene_synonym=mutU,recL;locus_tag=AD853_RS10825;old_locus_tag=ERS008462_02192 NZ_CPUY01000010.1 Protein Homology CDS 73304 75466 . + 0 ID=cds-WP_002211475.1;Parent=gene-AD853_RS10825;Dbxref=GenBank:WP_002211475.1;Name=WP_002211475.1;Ontology_term=GO:0006260,GO:0003677,GO:0003678,GO:0005524,GO:0016787;gbkey=CDS;gene=uvrD;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA,hydrolase activity|0016787||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008455510.1;locus_tag=AD853_RS10825;product=DNA helicase II;protein_id=WP_002211475.1;transl_table=11 NZ_CPUY01000010.1 RefSeq pseudogene 75580 76266 . - . ID=gene-AD853_RS10830;Name=AD853_RS10830;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD853_RS10830;pseudo=true NZ_CPUY01000010.1 Protein Homology CDS 75580 76266 . - 0 ID=cds-AD853_RS10830;Parent=gene-AD853_RS10830;Note=internal stop;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304730.1;locus_tag=AD853_RS10830;product=TetR/AcrR family transcriptional regulator;pseudo=true;transl_table=11 NZ_CPUY01000010.1 RefSeq gene 76695 77927 . + . ID=gene-AD853_RS10835;Name=AD853_RS10835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS10835;old_locus_tag=ERS008462_02195 NZ_CPUY01000010.1 Protein Homology CDS 76695 77927 . + 0 ID=cds-WP_038824062.1;Parent=gene-AD853_RS10835;Dbxref=GenBank:WP_038824062.1;Name=WP_038824062.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211477.1;locus_tag=AD853_RS10835;product=Tm-1-like ATP-binding domain-containing protein;protein_id=WP_038824062.1;transl_table=11 NZ_CPUY01000010.1 RefSeq gene 77953 78783 . + . ID=gene-AD853_RS10840;Name=AD853_RS10840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS10840;old_locus_tag=ERS008462_02196 NZ_CPUY01000010.1 Protein Homology CDS 77953 78783 . + 0 ID=cds-WP_002211478.1;Parent=gene-AD853_RS10840;Dbxref=GenBank:WP_002211478.1;Name=WP_002211478.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013649046.1;locus_tag=AD853_RS10840;product=phosphoenolpyruvate hydrolase family protein;protein_id=WP_002211478.1;transl_table=11 NZ_CPUY01000010.1 RefSeq gene 79432 80382 . + . ID=gene-AD853_RS10845;Name=corA;gbkey=Gene;gene=corA;gene_biotype=protein_coding;locus_tag=AD853_RS10845;old_locus_tag=ERS008462_02197 NZ_CPUY01000010.1 Protein Homology CDS 79432 80382 . + 0 ID=cds-WP_002211480.1;Parent=gene-AD853_RS10845;Dbxref=GenBank:WP_002211480.1;Name=WP_002211480.1;Ontology_term=GO:0006824,GO:0015693,GO:0015087,GO:0015095,GO:0016020;gbkey=CDS;gene=corA;go_component=membrane|0016020||IEA;go_function=cobalt ion transmembrane transporter activity|0015087||IEA,magnesium ion transmembrane transporter activity|0015095||IEA;go_process=cobalt ion transport|0006824||IEA,magnesium ion transport|0015693||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000947142.1;locus_tag=AD853_RS10845;product=magnesium/cobalt transporter CorA;protein_id=WP_002211480.1;transl_table=11 NZ_CPUY01000010.1 RefSeq pseudogene 80480 81369 . - . ID=gene-AD853_RS10850;Name=rarD;gbkey=Gene;gene=rarD;gene_biotype=pseudogene;locus_tag=AD853_RS10850;old_locus_tag=ERS008462_02198;pseudo=true NZ_CPUY01000010.1 Protein Homology CDS 80480 81369 . - 0 ID=cds-AD853_RS10850;Parent=gene-AD853_RS10850;Note=frameshifted;Ontology_term=GO:0006810,GO:0005215,GO:0005886;gbkey=CDS;gene=rarD;go_component=plasma membrane|0005886||IEA;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211481.1;locus_tag=AD853_RS10850;product=EamA family transporter RarD;pseudo=true;transl_table=11 NZ_CPUY01000010.1 RefSeq gene 81456 81926 . - . ID=gene-AD853_RS10855;Name=AD853_RS10855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS10855;old_locus_tag=ERS008462_02199 NZ_CPUY01000010.1 Protein Homology CDS 81456 81926 . - 0 ID=cds-WP_002211482.1;Parent=gene-AD853_RS10855;Dbxref=GenBank:WP_002211482.1;Name=WP_002211482.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211482.1;locus_tag=AD853_RS10855;product=thioesterase family protein;protein_id=WP_002211482.1;transl_table=11 NZ_CPUY01000010.1 RefSeq gene 82148 83026 . + . ID=gene-AD853_RS10860;Name=pldA;gbkey=Gene;gene=pldA;gene_biotype=protein_coding;locus_tag=AD853_RS10860;old_locus_tag=ERS008462_02200 NZ_CPUY01000010.1 Protein Homology CDS 82148 83026 . + 0 ID=cds-WP_002211483.1;Parent=gene-AD853_RS10860;Dbxref=GenBank:WP_002211483.1;Name=WP_002211483.1;Ontology_term=GO:0006629,GO:0004620;gbkey=CDS;gene=pldA;go_function=phospholipase activity|0004620||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012229073.1;locus_tag=AD853_RS10860;product=phospholipase A;protein_id=WP_002211483.1;transl_table=11 NZ_CPUY01000010.1 RefSeq gene 83103 84935 . + . ID=gene-AD853_RS10865;Name=recQ;gbkey=Gene;gene=recQ;gene_biotype=protein_coding;locus_tag=AD853_RS10865;old_locus_tag=ERS008462_02201 NZ_CPUY01000010.1 Protein Homology CDS 83103 84935 . + 0 ID=cds-WP_002211484.1;Parent=gene-AD853_RS10865;Dbxref=GenBank:WP_002211484.1;Name=WP_002211484.1;Ontology_term=GO:0006310,GO:0003678;gbkey=CDS;gene=recQ;go_function=DNA helicase activity|0003678||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019080187.1;locus_tag=AD853_RS10865;product=ATP-dependent DNA helicase RecQ;protein_id=WP_002211484.1;transl_table=11 NZ_CPUY01000010.1 RefSeq gene 85042 85662 . + . ID=gene-AD853_RS10870;Name=rhtC;gbkey=Gene;gene=rhtC;gene_biotype=protein_coding;locus_tag=AD853_RS10870;old_locus_tag=ERS008462_02202 NZ_CPUY01000010.1 Protein Homology CDS 85042 85662 . + 0 ID=cds-WP_002211485.1;Parent=gene-AD853_RS10870;Dbxref=GenBank:WP_002211485.1;Name=WP_002211485.1;Ontology_term=GO:0006865;gbkey=CDS;gene=rhtC;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004714274.1;locus_tag=AD853_RS10870;product=threonine export protein RhtC;protein_id=WP_002211485.1;transl_table=11 NZ_CPUY01000010.1 RefSeq gene 85713 86333 . - . ID=gene-AD853_RS10875;Name=rhtB;gbkey=Gene;gene=rhtB;gene_biotype=protein_coding;locus_tag=AD853_RS10875;old_locus_tag=ERS008462_02203 NZ_CPUY01000010.1 Protein Homology CDS 85713 86333 . - 0 ID=cds-WP_038824070.1;Parent=gene-AD853_RS10875;Dbxref=GenBank:WP_038824070.1;Name=WP_038824070.1;Ontology_term=GO:0006865,GO:0016020;gbkey=CDS;gene=rhtB;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019080185.1;locus_tag=AD853_RS10875;product=homoserine/homoserine lactone efflux protein;protein_id=WP_038824070.1;transl_table=11 NZ_CPUY01000010.1 RefSeq gene 86543 87556 . + . ID=gene-AD853_RS10880;Name=pldB;gbkey=Gene;gene=pldB;gene_biotype=protein_coding;locus_tag=AD853_RS10880;old_locus_tag=ERS008462_02204 NZ_CPUY01000010.1 Protein Homology CDS 86543 87556 . + 0 ID=cds-WP_002211487.1;Parent=gene-AD853_RS10880;Dbxref=GenBank:WP_002211487.1;Name=WP_002211487.1;gbkey=CDS;gene=pldB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211487.1;locus_tag=AD853_RS10880;product=lysophospholipase L2;protein_id=WP_002211487.1;transl_table=11 NZ_CPUY01000010.1 RefSeq gene 87591 88400 . + . ID=gene-AD853_RS10885;Name=yigL;gbkey=Gene;gene=yigL;gene_biotype=protein_coding;locus_tag=AD853_RS10885;old_locus_tag=ERS008462_02205 NZ_CPUY01000010.1 Protein Homology CDS 87591 88400 . + 0 ID=cds-WP_038824060.1;Parent=gene-AD853_RS10885;Dbxref=GenBank:WP_038824060.1;Name=WP_038824060.1;gbkey=CDS;gene=yigL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012104312.1;locus_tag=AD853_RS10885;product=sugar/pyridoxal phosphate phosphatase YigL;protein_id=WP_038824060.1;transl_table=11 NZ_CPUY01000010.1 RefSeq gene 88664 89863 . + . ID=gene-AD853_RS10890;Name=AD853_RS10890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS10890;old_locus_tag=ERS008462_02206 NZ_CPUY01000010.1 Protein Homology CDS 88664 89863 . + 0 ID=cds-WP_038824059.1;Parent=gene-AD853_RS10890;Dbxref=GenBank:WP_038824059.1;Name=WP_038824059.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304727.1;locus_tag=AD853_RS10890;product=putative mucin/carbohydrate-binding domain-containing protein;protein_id=WP_038824059.1;transl_table=11 NZ_CPUY01000010.1 RefSeq gene 89937 91052 . - . ID=gene-AD853_RS10895;Name=glpQ;gbkey=Gene;gene=glpQ;gene_biotype=protein_coding;locus_tag=AD853_RS10895;old_locus_tag=ERS008462_02207 NZ_CPUY01000010.1 Protein Homology CDS 89937 91052 . - 0 ID=cds-WP_002211490.1;Parent=gene-AD853_RS10895;Dbxref=GenBank:WP_002211490.1;Name=WP_002211490.1;Ontology_term=GO:0006629,GO:0008081;gbkey=CDS;gene=glpQ;go_function=phosphoric diester hydrolase activity|0008081||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016674700.1;locus_tag=AD853_RS10895;product=glycerophosphodiester phosphodiesterase;protein_id=WP_002211490.1;transl_table=11 NZ_CPUY01000010.1 RefSeq pseudogene 91164 91244 . - . ID=gene-AD853_RS22190;Name=AD853_RS22190;end_range=91244,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD853_RS22190;partial=true;pseudo=true;start_range=.,91164 NZ_CPUY01000010.1 Protein Homology CDS 91164 91244 . - 0 ID=cds-AD853_RS22190;Parent=gene-AD853_RS22190;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=91244,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311152.1;locus_tag=AD853_RS22190;partial=true;product=hypothetical protein;pseudo=true;start_range=.,91164;transl_table=11 NZ_CPUY01000010.1 RefSeq gene 91405 91503 . + . ID=gene-AD853_RS22500;Name=AD853_RS22500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS22500 NZ_CPUY01000010.1 Protein Homology CDS 91405 91503 . + 0 ID=cds-WP_002216569.1;Parent=gene-AD853_RS22500;Dbxref=GenBank:WP_002216569.1;Name=WP_002216569.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002216569.1;locus_tag=AD853_RS22500;product=hypothetical protein;protein_id=WP_002216569.1;transl_table=11 NZ_CPUY01000010.1 RefSeq gene 91677 93332 . + . ID=gene-AD853_RS10905;Name=glpA;gbkey=Gene;gene=glpA;gene_biotype=protein_coding;locus_tag=AD853_RS10905;old_locus_tag=ERS008462_02208 NZ_CPUY01000010.1 Protein Homology CDS 91677 93332 . + 0 ID=cds-WP_038824058.1;Parent=gene-AD853_RS10905;Dbxref=GenBank:WP_038824058.1;Name=WP_038824058.1;Ontology_term=GO:0006072,GO:0046174,GO:0004368,GO:0010181,GO:0050660,GO:0009331;gbkey=CDS;gene=glpA;go_component=glycerol-3-phosphate dehydrogenase (FAD) complex|0009331||IEA;go_function=glycerol-3-phosphate dehydrogenase (quinone) activity|0004368||IEA,FMN binding|0010181||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=glycerol-3-phosphate metabolic process|0006072||IEA,polyol catabolic process|0046174||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211491.1;locus_tag=AD853_RS10905;product=anaerobic glycerol-3-phosphate dehydrogenase subunit A;protein_id=WP_038824058.1;transl_table=11 NZ_CPUY01000010.1 RefSeq gene 93322 94596 . + . ID=gene-AD853_RS10910;Name=glpB;gbkey=Gene;gene=glpB;gene_biotype=protein_coding;locus_tag=AD853_RS10910;old_locus_tag=ERS008462_02209 NZ_CPUY01000010.1 Protein Homology CDS 93322 94596 . + 0 ID=cds-WP_012304726.1;Parent=gene-AD853_RS10910;Dbxref=GenBank:WP_012304726.1;Name=WP_012304726.1;gbkey=CDS;gene=glpB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211492.1;locus_tag=AD853_RS10910;product=glycerol-3-phosphate dehydrogenase subunit GlpB;protein_id=WP_012304726.1;transl_table=11 NZ_CPUY01000010.1 RefSeq gene 94593 95888 . + . ID=gene-AD853_RS10915;Name=glpC;gbkey=Gene;gene=glpC;gene_biotype=protein_coding;locus_tag=AD853_RS10915;old_locus_tag=ERS008462_02210 NZ_CPUY01000010.1 Protein Homology CDS 94593 95888 . + 0 ID=cds-WP_032466006.1;Parent=gene-AD853_RS10915;Dbxref=GenBank:WP_032466006.1;Name=WP_032466006.1;Ontology_term=GO:0006071,GO:0009061,GO:0004368,GO:0051536,GO:0009331,GO:0016020;gbkey=CDS;gene=glpC;go_component=glycerol-3-phosphate dehydrogenase (FAD) complex|0009331||IEA,membrane|0016020||IEA;go_function=glycerol-3-phosphate dehydrogenase (quinone) activity|0004368||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=glycerol metabolic process|0006071||IEA,anaerobic respiration|0009061||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211493.1;locus_tag=AD853_RS10915;product=anaerobic glycerol-3-phosphate dehydrogenase subunit GlpC;protein_id=WP_032466006.1;transl_table=11 NZ_CPUY01000010.1 RefSeq gene 96032 96559 . - . ID=gene-AD853_RS10920;Name=AD853_RS10920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS10920;old_locus_tag=ERS008462_02211 NZ_CPUY01000010.1 Protein Homology CDS 96032 96559 . - 0 ID=cds-WP_002211494.1;Parent=gene-AD853_RS10920;Dbxref=GenBank:WP_002211494.1;Name=WP_002211494.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211494.1;locus_tag=AD853_RS10920;product=DcrB family lipoprotein;protein_id=WP_002211494.1;transl_table=11 NZ_CPUY01000010.1 RefSeq gene 96689 97357 . - . ID=gene-AD853_RS10925;Name=AD853_RS10925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS10925;old_locus_tag=ERS008462_02212 NZ_CPUY01000010.1 Protein Homology CDS 96689 97357 . - 0 ID=cds-WP_011191518.1;Parent=gene-AD853_RS10925;Dbxref=GenBank:WP_011191518.1;Name=WP_011191518.1;Ontology_term=GO:0160254;gbkey=CDS;go_process=tRNA queuosine(34) biosynthetic process from salvaged queuosine or its precursors|0160254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011191518.1;locus_tag=AD853_RS10925;product=7-cyano-7-deazaguanine/7-aminomethyl-7-deazaguanine transporter;protein_id=WP_011191518.1;transl_table=11 NZ_CPUY01000010.1 RefSeq gene 97641 97895 . + . ID=gene-AD853_RS10930;Name=tusA;gbkey=Gene;gene=tusA;gene_biotype=protein_coding;locus_tag=AD853_RS10930;old_locus_tag=ERS008462_02213 NZ_CPUY01000010.1 Protein Homology CDS 97641 97895 . + 0 ID=cds-WP_002215973.1;Parent=gene-AD853_RS10930;Dbxref=GenBank:WP_002215973.1;Name=WP_002215973.1;Ontology_term=GO:0002143,GO:0097163;gbkey=CDS;gene=tusA;go_function=sulfur carrier activity|0097163||IEA;go_process=tRNA wobble position uridine thiolation|0002143||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002215973.1;locus_tag=AD853_RS10930;product=sulfurtransferase TusA;protein_id=WP_002215973.1;transl_table=11 NZ_CPUY01000010.1 RefSeq gene 97960 100308 . - . ID=gene-AD853_RS10935;Name=AD853_RS10935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS10935;old_locus_tag=ERS008462_02214 NZ_CPUY01000010.1 Protein Homology CDS 97960 100308 . - 0 ID=cds-WP_038824056.1;Parent=gene-AD853_RS10935;Dbxref=GenBank:WP_038824056.1;Name=WP_038824056.1;Ontology_term=GO:0006812,GO:0019829;gbkey=CDS;go_function=ATPase-coupled monoatomic cation transmembrane transporter activity|0019829||IEA;go_process=monoatomic cation transport|0006812||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002231925.1;locus_tag=AD853_RS10935;product=zinc/cadmium/mercury/lead-transporting ATPase;protein_id=WP_038824056.1;transl_table=11 NZ_CPUY01000010.1 RefSeq gene 100704 101330 . - . ID=gene-AD853_RS10940;Name=AD853_RS10940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS10940;old_locus_tag=ERS008462_02215 NZ_CPUY01000010.1 Protein Homology CDS 100704 101330 . - 0 ID=cds-WP_002211498.1;Parent=gene-AD853_RS10940;Dbxref=GenBank:WP_002211498.1;Name=WP_002211498.1;Ontology_term=GO:0006629,GO:0016787,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=hydrolase activity|0016787||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211498.1;locus_tag=AD853_RS10940;product=lysoplasmalogenase;protein_id=WP_002211498.1;transl_table=11 NZ_CPUY01000010.1 RefSeq gene 101620 101940 . + . ID=gene-AD853_RS10945;Name=AD853_RS10945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS10945;old_locus_tag=ERS008462_02216 NZ_CPUY01000010.1 Protein Homology CDS 101620 101940 . + 0 ID=cds-WP_002211499.1;Parent=gene-AD853_RS10945;Dbxref=GenBank:WP_002211499.1;Name=WP_002211499.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005163956.1;locus_tag=AD853_RS10945;product=DUF1820 family protein;protein_id=WP_002211499.1;transl_table=11 NZ_CPUY01000010.1 RefSeq gene 102152 102571 . + . ID=gene-AD853_RS10950;Name=AD853_RS10950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS10950;old_locus_tag=ERS008462_02217 NZ_CPUY01000010.1 Protein Homology CDS 102152 102571 . + 0 ID=cds-WP_002211500.1;Parent=gene-AD853_RS10950;Dbxref=GenBank:WP_002211500.1;Name=WP_002211500.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211500.1;locus_tag=AD853_RS10950;product=DUF2500 domain-containing protein;protein_id=WP_002211500.1;transl_table=11 NZ_CPUY01000010.1 RefSeq gene 102758 103030 . - . ID=gene-AD853_RS10955;Name=AD853_RS10955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS10955;old_locus_tag=ERS008462_02218 NZ_CPUY01000010.1 Protein Homology CDS 102758 103030 . - 0 ID=cds-WP_002211501.1;Parent=gene-AD853_RS10955;Dbxref=GenBank:WP_002211501.1;Name=WP_002211501.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005163952.1;locus_tag=AD853_RS10955;product=DUF1145 family protein;protein_id=WP_002211501.1;transl_table=11 NZ_CPUY01000010.1 RefSeq gene 103020 103682 . - . ID=gene-AD853_RS10960;Name=rsmD;gbkey=Gene;gene=rsmD;gene_biotype=protein_coding;locus_tag=AD853_RS10960;old_locus_tag=ERS008462_02219 NZ_CPUY01000010.1 Protein Homology CDS 103020 103682 . - 0 ID=cds-WP_002211502.1;Parent=gene-AD853_RS10960;Dbxref=GenBank:WP_002211502.1;Name=WP_002211502.1;Ontology_term=GO:0031167,GO:0003676,GO:0008168;gbkey=CDS;gene=rsmD;go_function=nucleic acid binding|0003676||IEA,methyltransferase activity|0008168||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012229076.1;locus_tag=AD853_RS10960;product=16S rRNA (guanine(966)-N(2))-methyltransferase;protein_id=WP_002211502.1;transl_table=11 NZ_CPUY01000010.1 RefSeq gene 103964 105553 . + . ID=gene-AD853_RS10970;Name=ftsY;gbkey=Gene;gene=ftsY;gene_biotype=protein_coding;locus_tag=AD853_RS10970;old_locus_tag=ERS008462_02220 NZ_CPUY01000010.1 Protein Homology CDS 103964 105553 . + 0 ID=cds-WP_038834276.1;Parent=gene-AD853_RS10970;Dbxref=GenBank:WP_038834276.1;Name=WP_038834276.1;Ontology_term=GO:0006614,GO:0009306,GO:0003924,GO:0005047;gbkey=CDS;gene=ftsY;go_function=GTPase activity|0003924||IEA,signal recognition particle binding|0005047||IEA;go_process=SRP-dependent cotranslational protein targeting to membrane|0006614||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002371117.1;locus_tag=AD853_RS10970;product=signal recognition particle-docking protein FtsY;protein_id=WP_038834276.1;transl_table=11 NZ_CPUY01000010.1 RefSeq gene 105559 106227 . + . ID=gene-AD853_RS10975;Name=ftsE;gbkey=Gene;gene=ftsE;gene_biotype=protein_coding;locus_tag=AD853_RS10975;old_locus_tag=ERS008462_02221 NZ_CPUY01000010.1 Protein Homology CDS 105559 106227 . + 0 ID=cds-WP_004391337.1;Parent=gene-AD853_RS10975;Dbxref=GenBank:WP_004391337.1;Name=WP_004391337.1;Ontology_term=GO:0000910,GO:0005524;gbkey=CDS;gene=ftsE;go_function=ATP binding|0005524||IEA;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019080173.1;locus_tag=AD853_RS10975;product=cell division ATP-binding protein FtsE;protein_id=WP_004391337.1;transl_table=11 NZ_CPUY01000010.1 RefSeq gene 106217 107170 . + . ID=gene-AD853_RS10980;Name=ftsX;gbkey=Gene;gene=ftsX;gene_biotype=protein_coding;locus_tag=AD853_RS10980;old_locus_tag=ERS008462_02222 NZ_CPUY01000010.1 Protein Homology CDS 106217 107170 . + 0 ID=cds-WP_002211505.1;Parent=gene-AD853_RS10980;Dbxref=GenBank:WP_002211505.1;Name=WP_002211505.1;Ontology_term=GO:0000910;gbkey=CDS;gene=ftsX;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211505.1;locus_tag=AD853_RS10980;product=permease-like cell division protein FtsX;protein_id=WP_002211505.1;transl_table=11 NZ_CPUY01000010.1 RefSeq gene 107481 108338 . + . ID=gene-AD853_RS10985;Name=rpoH;gbkey=Gene;gene=rpoH;gene_biotype=protein_coding;locus_tag=AD853_RS10985;old_locus_tag=ERS008462_02223 NZ_CPUY01000010.1 Protein Homology CDS 107481 108338 . + 0 ID=cds-WP_002211506.1;Parent=gene-AD853_RS10985;Dbxref=GenBank:WP_002211506.1;Name=WP_002211506.1;Ontology_term=GO:0006352,GO:0006355,GO:0003700,GO:0016987;gbkey=CDS;gene=rpoH;go_function=DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008458573.1;locus_tag=AD853_RS10985;product=RNA polymerase sigma factor RpoH;protein_id=WP_002211506.1;transl_table=11 NZ_CPUY01000010.1 RefSeq gene 108545 108937 . - . ID=gene-AD853_RS10990;Name=panM;gbkey=Gene;gene=panM;gene_biotype=protein_coding;locus_tag=AD853_RS10990;old_locus_tag=ERS008462_02224 NZ_CPUY01000010.1 Protein Homology CDS 108545 108937 . - 0 ID=cds-WP_011191522.1;Parent=gene-AD853_RS10990;Dbxref=GenBank:WP_011191522.1;Name=WP_011191522.1;Ontology_term=GO:0015940,GO:0031638,GO:0008080;gbkey=CDS;gene=panM;go_function=N-acetyltransferase activity|0008080||IEA;go_process=pantothenate biosynthetic process|0015940||IEA,zymogen activation|0031638||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211507.1;locus_tag=AD853_RS10990;product=aspartate 1-decarboxylase autocleavage activator PanM;protein_id=WP_011191522.1;transl_table=11 NZ_CPUY01000010.1 RefSeq gene 109359 110474 . + . ID=gene-AD853_RS10995;Name=AD853_RS10995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS10995;old_locus_tag=ERS008462_02225 NZ_CPUY01000010.1 Protein Homology CDS 109359 110474 . + 0 ID=cds-WP_024063587.1;Parent=gene-AD853_RS10995;Dbxref=GenBank:WP_024063587.1;Name=WP_024063587.1;Ontology_term=GO:0015803,GO:0055085,GO:0015658,GO:0022857,GO:0140359;gbkey=CDS;go_function=branched-chain amino acid transmembrane transporter activity|0015658||IEA,transmembrane transporter activity|0022857||IEA,ABC-type transporter activity|0140359||IEA;go_process=branched-chain amino acid transport|0015803||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011191523.1;locus_tag=AD853_RS10995;product=branched-chain amino acid ABC transporter substrate-binding protein;protein_id=WP_024063587.1;transl_table=11 NZ_CPUY01000010.1 RefSeq gene 110655 111581 . + . ID=gene-AD853_RS11000;Name=livH;gbkey=Gene;gene=livH;gene_biotype=protein_coding;locus_tag=AD853_RS11000;old_locus_tag=ERS008462_02226 NZ_CPUY01000010.1 Protein Homology CDS 110655 111581 . + 0 ID=cds-WP_002211509.1;Parent=gene-AD853_RS11000;Dbxref=GenBank:WP_002211509.1;Name=WP_002211509.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=livH;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010436488.1;locus_tag=AD853_RS11000;product=high-affinity branched-chain amino acid ABC transporter permease LivH;protein_id=WP_002211509.1;transl_table=11 NZ_CPUY01000010.1 RefSeq gene 111578 112864 . + . ID=gene-AD853_RS11005;Name=AD853_RS11005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS11005;old_locus_tag=ERS008462_02227 NZ_CPUY01000010.1 Protein Homology CDS 111578 112864 . + 0 ID=cds-WP_002211510.1;Parent=gene-AD853_RS11005;Dbxref=GenBank:WP_002211510.1;Name=WP_002211510.1;Ontology_term=GO:0015658,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=branched-chain amino acid transmembrane transporter activity|0015658||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012104327.1;locus_tag=AD853_RS11005;product=high-affinity branched-chain amino acid ABC transporter permease LivM;protein_id=WP_002211510.1;transl_table=11 NZ_CPUY01000010.1 RefSeq gene 112861 113628 . + . ID=gene-AD853_RS11010;Name=livG;gbkey=Gene;gene=livG;gene_biotype=protein_coding;locus_tag=AD853_RS11010;old_locus_tag=ERS008462_02228 NZ_CPUY01000010.1 Protein Homology CDS 112861 113628 . + 0 ID=cds-WP_002211511.1;Parent=gene-AD853_RS11010;Dbxref=GenBank:WP_002211511.1;Name=WP_002211511.1;Ontology_term=GO:0005524;gbkey=CDS;gene=livG;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011191524.1;locus_tag=AD853_RS11010;product=high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG;protein_id=WP_002211511.1;transl_table=11 NZ_CPUY01000010.1 RefSeq gene 113673 114374 . + . ID=gene-AD853_RS11015;Name=livF;gbkey=Gene;gene=livF;gene_biotype=protein_coding;locus_tag=AD853_RS11015;old_locus_tag=ERS008462_02229 NZ_CPUY01000010.1 Protein Homology CDS 113673 114374 . + 0 ID=cds-WP_002211512.1;Parent=gene-AD853_RS11015;Dbxref=GenBank:WP_002211512.1;Name=WP_002211512.1;gbkey=CDS;gene=livF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004957566.1;locus_tag=AD853_RS11015;product=high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivF;protein_id=WP_002211512.1;transl_table=11 NZ_CPUY01000010.1 RefSeq gene 114602 115063 . + . ID=gene-AD853_RS11020;Name=AD853_RS11020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS11020;old_locus_tag=ERS008462_02230 NZ_CPUY01000010.1 Protein Homology CDS 114602 115063 . + 0 ID=cds-WP_038824936.1;Parent=gene-AD853_RS11020;Dbxref=GenBank:WP_038824936.1;Name=WP_038824936.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211513.1;locus_tag=AD853_RS11020;product=hypothetical protein;protein_id=WP_038824936.1;transl_table=11 NZ_CPUY01000010.1 RefSeq gene 115178 116284 . - . ID=gene-AD853_RS11025;Name=AD853_RS11025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS11025;old_locus_tag=ERS008462_02231 NZ_CPUY01000010.1 Protein Homology CDS 115178 116284 . - 0 ID=cds-WP_038824935.1;Parent=gene-AD853_RS11025;Dbxref=GenBank:WP_038824935.1;Name=WP_038824935.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211514.1;locus_tag=AD853_RS11025;product=hypothetical protein;protein_id=WP_038824935.1;transl_table=11 NZ_CPUY01000010.1 RefSeq gene 116341 116859 . - . ID=gene-AD853_RS11030;Name=AD853_RS11030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS11030;old_locus_tag=ERS008462_02232 NZ_CPUY01000010.1 Protein Homology CDS 116341 116859 . - 0 ID=cds-WP_012304720.1;Parent=gene-AD853_RS11030;Dbxref=GenBank:WP_012304720.1;Name=WP_012304720.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011191527.1;locus_tag=AD853_RS11030;product=hypothetical protein;protein_id=WP_012304720.1;transl_table=11 NZ_CPUY01000010.1 RefSeq gene 116921 117568 . - . ID=gene-AD853_RS11035;Name=AD853_RS11035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS11035;old_locus_tag=ERS008462_02233 NZ_CPUY01000010.1 Protein Homology CDS 116921 117568 . - 0 ID=cds-WP_012304719.1;Parent=gene-AD853_RS11035;Dbxref=GenBank:WP_012304719.1;Name=WP_012304719.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304719.1;locus_tag=AD853_RS11035;product=hypothetical protein;protein_id=WP_012304719.1;transl_table=11 NZ_CPUY01000010.1 RefSeq gene 117540 118226 . - . ID=gene-AD853_RS11040;Name=AD853_RS11040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS11040;old_locus_tag=ERS008462_02234 NZ_CPUY01000010.1 Protein Homology CDS 117540 118226 . - 0 ID=cds-WP_024063590.1;Parent=gene-AD853_RS11040;Dbxref=GenBank:WP_024063590.1;Name=WP_024063590.1;Ontology_term=GO:0006457,GO:0043711,GO:0030288;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_process=protein folding|0006457||IEA,pilus organization|0043711||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304718.1;locus_tag=AD853_RS11040;product=fimbrial biogenesis chaperone;protein_id=WP_024063590.1;transl_table=11 NZ_CPUY01000010.1 RefSeq gene 118244 120559 . - . ID=gene-AD853_RS11045;Name=AD853_RS11045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS11045;old_locus_tag=ERS008462_02235 NZ_CPUY01000010.1 Protein Homology CDS 118244 120559 . - 0 ID=cds-WP_038824934.1;Parent=gene-AD853_RS11045;Dbxref=GenBank:WP_038824934.1;Name=WP_038824934.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011191530.1;locus_tag=AD853_RS11045;product=TcfC E-set like domain-containing protein;protein_id=WP_038824934.1;transl_table=11 NZ_CPUY01000010.1 RefSeq gene 120826 121317 . - . ID=gene-AD853_RS11050;Name=AD853_RS11050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS11050;old_locus_tag=ERS008462_02236 NZ_CPUY01000010.1 Protein Homology CDS 120826 121317 . - 0 ID=cds-WP_033849767.1;Parent=gene-AD853_RS11050;Dbxref=GenBank:WP_033849767.1;Name=WP_033849767.1;Ontology_term=GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002228181.1;locus_tag=AD853_RS11050;product=CS1 type fimbrial major subunit;protein_id=WP_033849767.1;transl_table=11 NZ_CPUY01000010.1 RefSeq gene 121872 123191 . + . ID=gene-AD853_RS11055;Name=ugpB;gbkey=Gene;gene=ugpB;gene_biotype=protein_coding;locus_tag=AD853_RS11055;old_locus_tag=ERS008462_02237 NZ_CPUY01000010.1 Protein Homology CDS 121872 123191 . + 0 ID=cds-WP_012104336.1;Parent=gene-AD853_RS11055;Dbxref=GenBank:WP_012104336.1;Name=WP_012104336.1;Ontology_term=GO:0055085;gbkey=CDS;gene=ugpB;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004710220.1;locus_tag=AD853_RS11055;product=sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB;protein_id=WP_012104336.1;transl_table=11 NZ_CPUY01000010.1 RefSeq gene 123468 124355 . + . ID=gene-AD853_RS11060;Name=ugpA;gbkey=Gene;gene=ugpA;gene_biotype=protein_coding;locus_tag=AD853_RS11060;old_locus_tag=ERS008462_02238 NZ_CPUY01000010.1 Protein Homology CDS 123468 124355 . + 0 ID=cds-WP_012104337.1;Parent=gene-AD853_RS11060;Dbxref=GenBank:WP_012104337.1;Name=WP_012104337.1;gbkey=CDS;gene=ugpA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004703935.1;locus_tag=AD853_RS11060;product=sn-glycerol-3-phosphate ABC transporter permease UgpA;protein_id=WP_012104337.1;transl_table=11 NZ_CPUY01000010.1 RefSeq gene 124352 125197 . + . ID=gene-AD853_RS11065;Name=ugpE;gbkey=Gene;gene=ugpE;gene_biotype=protein_coding;locus_tag=AD853_RS11065;old_locus_tag=ERS008462_02239 NZ_CPUY01000010.1 Protein Homology CDS 124352 125197 . + 0 ID=cds-WP_002211522.1;Parent=gene-AD853_RS11065;Dbxref=GenBank:WP_002211522.1;Name=WP_002211522.1;Ontology_term=GO:0015794,GO:0005886,GO:0055052;gbkey=CDS;gene=ugpE;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_process=glycerol-3-phosphate transmembrane transport|0015794||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211522.1;locus_tag=AD853_RS11065;product=sn-glycerol-3-phosphate ABC transporter permease UgpE;protein_id=WP_002211522.1;transl_table=11 NZ_CPUY01000010.1 RefSeq pseudogene 125204 126284 . + . ID=gene-AD853_RS11070;Name=AD853_RS11070;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD853_RS11070;old_locus_tag=ERS008462_02240;pseudo=true NZ_CPUY01000010.1 Protein Homology CDS 125204 126284 . + 0 ID=cds-AD853_RS11070;Parent=gene-AD853_RS11070;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211523.1;locus_tag=AD853_RS11070;product=sn-glycerol-3-phosphate import ATP-binding protein UgpC;pseudo=true;transl_table=11 NZ_CPUY01000010.1 RefSeq gene 126281 127030 . + . ID=gene-AD853_RS11075;Name=ugpQ;gbkey=Gene;gene=ugpQ;gene_biotype=protein_coding;locus_tag=AD853_RS11075;old_locus_tag=ERS008462_02242 NZ_CPUY01000010.1 Protein Homology CDS 126281 127030 . + 0 ID=cds-WP_011191534.1;Parent=gene-AD853_RS11075;Dbxref=GenBank:WP_011191534.1;Name=WP_011191534.1;Ontology_term=GO:0006629,GO:0008081;gbkey=CDS;gene=ugpQ;go_function=phosphoric diester hydrolase activity|0008081||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211524.1;locus_tag=AD853_RS11075;product=glycerophosphodiester phosphodiesterase;protein_id=WP_011191534.1;transl_table=11 NZ_CPUY01000010.1 RefSeq gene 127131 128087 . + . ID=gene-AD853_RS11080;Name=AD853_RS11080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS11080;old_locus_tag=ERS008462_02243 NZ_CPUY01000010.1 Protein Homology CDS 127131 128087 . + 0 ID=cds-WP_002224020.1;Parent=gene-AD853_RS11080;Dbxref=GenBank:WP_002224020.1;Name=WP_002224020.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019845393.1;locus_tag=AD853_RS11080;product=AEC family transporter;protein_id=WP_002224020.1;transl_table=11 NZ_CPUY01000010.1 RefSeq gene 128224 128892 . + . ID=gene-AD853_RS11085;Name=AD853_RS11085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS11085;old_locus_tag=ERS008462_02244 NZ_CPUY01000010.1 Protein Homology CDS 128224 128892 . + 0 ID=cds-WP_038824457.1;Parent=gene-AD853_RS11085;Dbxref=GenBank:WP_038824457.1;Name=WP_038824457.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011191535.1;locus_tag=AD853_RS11085;product=hypothetical protein;protein_id=WP_038824457.1;transl_table=11 NZ_CPUY01000010.1 RefSeq gene 128950 130107 . + . ID=gene-AD853_RS11090;Name=AD853_RS11090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS11090;old_locus_tag=ERS008462_02245 NZ_CPUY01000010.1 Protein Homology CDS 128950 130107 . + 0 ID=cds-WP_230674873.1;Parent=gene-AD853_RS11090;Dbxref=GenBank:WP_230674873.1;Name=WP_230674873.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011191536.1;locus_tag=AD853_RS11090;product=helix-turn-helix domain-containing protein;protein_id=WP_230674873.1;transl_table=11 NZ_CPUY01000010.1 RefSeq gene 130314 131213 . + . ID=gene-AD853_RS11095;Name=AD853_RS11095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS11095;old_locus_tag=ERS008462_02246 NZ_CPUY01000010.1 Protein Homology CDS 130314 131213 . + 0 ID=cds-WP_002215597.1;Parent=gene-AD853_RS11095;Dbxref=GenBank:WP_002215597.1;Name=WP_002215597.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002215597.1;locus_tag=AD853_RS11095;product=carboxylate/amino acid/amine transporter;protein_id=WP_002215597.1;transl_table=11 NZ_CPUY01000010.1 RefSeq gene 131101 132054 . - . ID=gene-AD853_RS11100;Name=metR;gbkey=Gene;gene=metR;gene_biotype=protein_coding;locus_tag=AD853_RS11100;old_locus_tag=ERS008462_02247 NZ_CPUY01000010.1 Protein Homology CDS 131101 132054 . - 0 ID=cds-WP_011191537.1;Parent=gene-AD853_RS11100;Dbxref=GenBank:WP_011191537.1;Name=WP_011191537.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=metR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011191537.1;locus_tag=AD853_RS11100;product=HTH-type transcriptional regulator MetR;protein_id=WP_011191537.1;transl_table=11 NZ_CPUY01000010.1 RefSeq gene 132160 134436 . + . ID=gene-AD853_RS11105;Name=metE;gbkey=Gene;gene=metE;gene_biotype=protein_coding;locus_tag=AD853_RS11105;old_locus_tag=ERS008462_02248 NZ_CPUY01000010.1 Protein Homology CDS 132160 134436 . + 0 ID=cds-WP_072080815.1;Parent=gene-AD853_RS11105;Dbxref=GenBank:WP_072080815.1;Name=WP_072080815.1;Ontology_term=GO:0008652,GO:0009086,GO:0003871,GO:0008270;gbkey=CDS;gene=metE;go_function=5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity|0003871||IEA,zinc ion binding|0008270||IEA;go_process=amino acid biosynthetic process|0008652||IEA,methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211526.1;locus_tag=AD853_RS11105;product=5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase;protein_id=WP_072080815.1;transl_table=11 NZ_CPUY01000010.1 RefSeq gene 134491 135363 . - . ID=gene-AD853_RS11110;Name=AD853_RS11110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS11110;old_locus_tag=ERS008462_02249 NZ_CPUY01000010.1 Protein Homology CDS 134491 135363 . - 0 ID=cds-WP_038824455.1;Parent=gene-AD853_RS11110;Dbxref=GenBank:WP_038824455.1;Name=WP_038824455.1;Ontology_term=GO:0016787,GO:0005829;gbkey=CDS;go_component=cytosol|0005829||IEA;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012413425.1;locus_tag=AD853_RS11110;product=dienelactone hydrolase family protein;protein_id=WP_038824455.1;transl_table=11 NZ_CPUY01000010.1 RefSeq gene 135791 136552 . + . ID=gene-AD853_RS11115;Name=udp;gbkey=Gene;gene=udp;gene_biotype=protein_coding;locus_tag=AD853_RS11115;old_locus_tag=ERS008462_02250 NZ_CPUY01000010.1 Protein Homology CDS 135791 136552 . + 0 ID=cds-WP_002211528.1;Parent=gene-AD853_RS11115;Dbxref=GenBank:WP_002211528.1;Name=WP_002211528.1;Ontology_term=GO:0009116,GO:0016763;gbkey=CDS;gene=udp;go_function=pentosyltransferase activity|0016763||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224472.1;locus_tag=AD853_RS11115;product=uridine phosphorylase;protein_id=WP_002211528.1;transl_table=11 NZ_CPUY01000010.1 RefSeq gene 136673 137518 . + . ID=gene-AD853_RS11120;Name=AD853_RS11120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS11120;old_locus_tag=ERS008462_02251 NZ_CPUY01000010.1 Protein Homology CDS 136673 137518 . + 0 ID=cds-WP_038824454.1;Parent=gene-AD853_RS11120;Dbxref=GenBank:WP_038824454.1;Name=WP_038824454.1;Ontology_term=GO:0004721,GO:0004725;gbkey=CDS;go_function=phosphoprotein phosphatase activity|0004721||IEA,protein tyrosine phosphatase activity|0004725||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002228183.1;locus_tag=AD853_RS11120;product=tyrosine-protein phosphatase;protein_id=WP_038824454.1;transl_table=11 NZ_CPUY01000010.1 RefSeq gene 137882 139693 . + . ID=gene-AD853_RS11125;Name=AD853_RS11125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS11125;old_locus_tag=ERS008462_02252 NZ_CPUY01000010.1 Protein Homology CDS 137882 139693 . + 0 ID=cds-WP_038824453.1;Parent=gene-AD853_RS11125;Dbxref=GenBank:WP_038824453.1;Name=WP_038824453.1;Ontology_term=GO:0015833,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_process=peptide transport|0015833||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012104342.1;locus_tag=AD853_RS11125;product=carbon starvation CstA family protein;protein_id=WP_038824453.1;transl_table=11 NZ_CPUY01000010.1 RefSeq gene 139965 140495 . + . ID=gene-AD853_RS11130;Name=AD853_RS11130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS11130;old_locus_tag=ERS008462_02253 NZ_CPUY01000010.1 Protein Homology CDS 139965 140495 . + 0 ID=cds-WP_024063595.1;Parent=gene-AD853_RS11130;Dbxref=GenBank:WP_024063595.1;Name=WP_024063595.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011191541.1;locus_tag=AD853_RS11130;product=DedA family protein;protein_id=WP_024063595.1;transl_table=11 NZ_CPUY01000010.1 RefSeq gene 140703 142208 . + . ID=gene-AD853_RS11135;Name=rmuC;gbkey=Gene;gene=rmuC;gene_biotype=protein_coding;locus_tag=AD853_RS11135;old_locus_tag=ERS008462_02254 NZ_CPUY01000010.1 Protein Homology CDS 140703 142208 . + 0 ID=cds-WP_038824452.1;Parent=gene-AD853_RS11135;Dbxref=GenBank:WP_038824452.1;Name=WP_038824452.1;gbkey=CDS;gene=rmuC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012104343.1;locus_tag=AD853_RS11135;product=DNA recombination protein RmuC;protein_id=WP_038824452.1;transl_table=11 NZ_CPUY01000010.1 RefSeq gene 142300 143055 . + . ID=gene-AD853_RS11140;Name=ubiE;gbkey=Gene;gene=ubiE;gene_biotype=protein_coding;locus_tag=AD853_RS11140;old_locus_tag=ERS008462_02255 NZ_CPUY01000010.1 Protein Homology CDS 142300 143055 . + 0 ID=cds-WP_002224024.1;Parent=gene-AD853_RS11140;Dbxref=GenBank:WP_002224024.1;Name=WP_002224024.1;Ontology_term=GO:0008168;gbkey=CDS;gene=ubiE;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019080147.1;locus_tag=AD853_RS11140;product=bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1%2C4-benzoquinol methylase UbiE;protein_id=WP_002224024.1;transl_table=11 NZ_CPUY01000010.1 RefSeq gene 143069 143719 . + . ID=gene-AD853_RS11145;Name=ubiJ;gbkey=Gene;gene=ubiJ;gene_biotype=protein_coding;locus_tag=AD853_RS11145;old_locus_tag=ERS008462_02256 NZ_CPUY01000010.1 Protein Homology CDS 143069 143719 . + 0 ID=cds-WP_002215928.1;Parent=gene-AD853_RS11145;Dbxref=GenBank:WP_002215928.1;Name=WP_002215928.1;Ontology_term=GO:0006744;gbkey=CDS;gene=ubiJ;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002215928.1;locus_tag=AD853_RS11145;product=ubiquinone biosynthesis protein UbiJ;protein_id=WP_002215928.1;transl_table=11 NZ_CPUY01000010.1 RefSeq gene 143719 145350 . + . ID=gene-AD853_RS11150;Name=ubiB;gbkey=Gene;gene=ubiB;gene_biotype=protein_coding;locus_tag=AD853_RS11150;old_locus_tag=ERS008462_02257 NZ_CPUY01000010.1 Protein Homology CDS 143719 145350 . + 0 ID=cds-WP_002211535.1;Parent=gene-AD853_RS11150;Dbxref=GenBank:WP_002211535.1;Name=WP_002211535.1;Ontology_term=GO:0006744;gbkey=CDS;gene=ubiB;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211535.1;locus_tag=AD853_RS11150;product=ubiquinone biosynthesis regulatory protein kinase UbiB;protein_id=WP_002211535.1;transl_table=11 NZ_CPUY01000010.1 RefSeq gene 145530 145796 . + . ID=gene-AD853_RS11155;Name=AD853_RS11155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS11155;old_locus_tag=ERS008462_02258 NZ_CPUY01000010.1 Protein Homology CDS 145530 145796 . + 0 ID=cds-WP_002211536.1;Parent=gene-AD853_RS11155;Dbxref=GenBank:WP_002211536.1;Name=WP_002211536.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211536.1;locus_tag=AD853_RS11155;product=Sec-independent protein translocase subunit TatA;protein_id=WP_002211536.1;transl_table=11 NZ_CPUY01000010.1 RefSeq gene 145800 146462 . + . ID=gene-AD853_RS11160;Name=tatB;gbkey=Gene;gene=tatB;gene_biotype=protein_coding;locus_tag=AD853_RS11160;old_locus_tag=ERS008462_02259 NZ_CPUY01000010.1 Protein Homology CDS 145800 146462 . + 0 ID=cds-WP_002211537.1;Parent=gene-AD853_RS11160;Dbxref=GenBank:WP_002211537.1;Name=WP_002211537.1;Ontology_term=GO:0015628,GO:0008320,GO:0016020;gbkey=CDS;gene=tatB;go_component=membrane|0016020||IEA;go_function=protein transmembrane transporter activity|0008320||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004875878.1;locus_tag=AD853_RS11160;product=Sec-independent protein translocase protein TatB;protein_id=WP_002211537.1;transl_table=11 NZ_CPUY01000010.1 RefSeq gene 146465 147241 . + . ID=gene-AD853_RS11165;Name=tatC;gbkey=Gene;gene=tatC;gene_biotype=protein_coding;locus_tag=AD853_RS11165;old_locus_tag=ERS008462_02260 NZ_CPUY01000010.1 Protein Homology CDS 146465 147241 . + 0 ID=cds-WP_038824451.1;Parent=gene-AD853_RS11165;Dbxref=GenBank:WP_038824451.1;Name=WP_038824451.1;gbkey=CDS;gene=tatC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211538.1;locus_tag=AD853_RS11165;product=Sec-independent protein translocase subunit TatC;protein_id=WP_038824451.1;transl_table=11 NZ_CPUY01000010.1 RefSeq gene 147297 148079 . + . ID=gene-AD853_RS11170;Name=tatD;gbkey=Gene;gene=tatD;gene_biotype=protein_coding;locus_tag=AD853_RS11170;old_locus_tag=ERS008462_02261 NZ_CPUY01000010.1 Protein Homology CDS 147297 148079 . + 0 ID=cds-WP_012304710.1;Parent=gene-AD853_RS11170;Dbxref=GenBank:WP_012304710.1;Name=WP_012304710.1;Ontology_term=GO:0008408;gbkey=CDS;gene=tatD;go_function=3'-5' exonuclease activity|0008408||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005187843.1;locus_tag=AD853_RS11170;product=3'-5' ssDNA/RNA exonuclease TatD;protein_id=WP_012304710.1;transl_table=11 NZ_CPUY01000010.1 RefSeq gene 148094 149116 . + . ID=gene-AD853_RS11175;Name=hemB;gbkey=Gene;gene=hemB;gene_biotype=protein_coding;locus_tag=AD853_RS11175;old_locus_tag=ERS008462_02262 NZ_CPUY01000010.1 Protein Homology CDS 148094 149116 . + 0 ID=cds-WP_002211541.1;Parent=gene-AD853_RS11175;Dbxref=GenBank:WP_002211541.1;Name=WP_002211541.1;Ontology_term=GO:0033014,GO:0003824,GO:0004655,GO:0046872;gbkey=CDS;gene=hemB;go_function=catalytic activity|0003824||IEA,porphobilinogen synthase activity|0004655||IEA,metal ion binding|0046872||IEA;go_process=tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013649068.1;locus_tag=AD853_RS11175;product=porphobilinogen synthase;protein_id=WP_002211541.1;transl_table=11 NZ_CPUY01000010.1 RefSeq gene 149231 149719 . - . ID=gene-AD853_RS11180;Name=rfaH;gbkey=Gene;gene=rfaH;gene_biotype=protein_coding;locus_tag=AD853_RS11180;old_locus_tag=ERS008462_02263 NZ_CPUY01000010.1 Protein Homology CDS 149231 149719 . - 0 ID=cds-WP_011191545.1;Parent=gene-AD853_RS11180;Dbxref=GenBank:WP_011191545.1;Name=WP_011191545.1;Ontology_term=GO:0006355;gbkey=CDS;gene=rfaH;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211542.1;locus_tag=AD853_RS11180;product=transcription/translation regulatory transformer protein RfaH;protein_id=WP_011191545.1;transl_table=11 NZ_CPUY01000010.1 RefSeq gene 149967 151463 . + . ID=gene-AD853_RS11185;Name=ubiD;gbkey=Gene;gene=ubiD;gene_biotype=protein_coding;locus_tag=AD853_RS11185;old_locus_tag=ERS008462_02264 NZ_CPUY01000010.1 Protein Homology CDS 149967 151463 . + 0 ID=cds-WP_011191546.1;Parent=gene-AD853_RS11185;Dbxref=GenBank:WP_011191546.1;Name=WP_011191546.1;Ontology_term=GO:0016831;gbkey=CDS;gene=ubiD;go_function=carboxy-lyase activity|0016831||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005165587.1;locus_tag=AD853_RS11185;product=4-hydroxy-3-polyprenylbenzoate decarboxylase;protein_id=WP_011191546.1;transl_table=11 NZ_CPUY01000010.1 RefSeq gene 151518 152219 . + . ID=gene-AD853_RS11190;Name=fre;gbkey=Gene;gene=fre;gene_biotype=protein_coding;locus_tag=AD853_RS11190;old_locus_tag=ERS008462_02265 NZ_CPUY01000010.1 Protein Homology CDS 151518 152219 . + 0 ID=cds-WP_002215918.1;Parent=gene-AD853_RS11190;Dbxref=GenBank:WP_002215918.1;Name=WP_002215918.1;Ontology_term=GO:0016491;gbkey=CDS;gene=fre;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224484.1;locus_tag=AD853_RS11190;product=NAD(P)H-flavin reductase;protein_id=WP_002215918.1;transl_table=11 NZ_CPUY01000010.1 RefSeq gene 152379 153542 . - . ID=gene-AD853_RS11195;Name=fadA;gbkey=Gene;gene=fadA;gene_biotype=protein_coding;locus_tag=AD853_RS11195;old_locus_tag=ERS008462_02266 NZ_CPUY01000010.1 Protein Homology CDS 152379 153542 . - 0 ID=cds-WP_038824450.1;Parent=gene-AD853_RS11195;Dbxref=GenBank:WP_038824450.1;Name=WP_038824450.1;Ontology_term=GO:0006631,GO:0003988;gbkey=CDS;gene=fadA;go_function=acetyl-CoA C-acyltransferase activity|0003988||IEA;go_process=fatty acid metabolic process|0006631||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012440011.1;locus_tag=AD853_RS11195;product=acetyl-CoA C-acyltransferase FadA;protein_id=WP_038824450.1;transl_table=11 NZ_CPUY01000010.1 RefSeq gene 153554 155743 . - . ID=gene-AD853_RS11200;Name=fadB;gbkey=Gene;gene=fadB;gene_biotype=protein_coding;locus_tag=AD853_RS11200;old_locus_tag=ERS008462_02267 NZ_CPUY01000010.1 Protein Homology CDS 153554 155743 . - 0 ID=cds-WP_038824449.1;Parent=gene-AD853_RS11200;Dbxref=GenBank:WP_038824449.1;Name=WP_038824449.1;Ontology_term=GO:0006631,GO:0016491,GO:0070403;gbkey=CDS;gene=fadB;go_function=oxidoreductase activity|0016491||IEA,NAD+ binding|0070403||IEA;go_process=fatty acid metabolic process|0006631||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005274741.1;locus_tag=AD853_RS11200;product=fatty acid oxidation complex subunit alpha FadB;protein_id=WP_038824449.1;transl_table=11 NZ_CPUY01000010.1 RefSeq gene 156070 157401 . + . ID=gene-AD853_RS11205;Name=pepQ;gbkey=Gene;gene=pepQ;gene_biotype=protein_coding;locus_tag=AD853_RS11205;old_locus_tag=ERS008462_02268 NZ_CPUY01000010.1 Protein Homology CDS 156070 157401 . + 0 ID=cds-WP_011191548.1;Parent=gene-AD853_RS11205;Dbxref=GenBank:WP_011191548.1;Name=WP_011191548.1;gbkey=CDS;gene=pepQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211547.1;locus_tag=AD853_RS11205;product=Xaa-Pro dipeptidase;protein_id=WP_011191548.1;transl_table=11 NZ_CPUY01000010.1 RefSeq gene 157401 158012 . + . ID=gene-AD853_RS11210;Name=AD853_RS11210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS11210;old_locus_tag=ERS008462_02269 NZ_CPUY01000010.1 Protein Homology CDS 157401 158012 . + 0 ID=cds-WP_002231137.1;Parent=gene-AD853_RS11210;Dbxref=GenBank:WP_002231137.1;Name=WP_002231137.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002231137.1;locus_tag=AD853_RS11210;product=IMPACT family protein;protein_id=WP_002231137.1;transl_table=11 NZ_CPUY01000010.1 RefSeq gene 158052 159503 . + . ID=gene-AD853_RS11215;Name=trkH;gbkey=Gene;gene=trkH;gene_biotype=protein_coding;locus_tag=AD853_RS11215;old_locus_tag=ERS008462_02270 NZ_CPUY01000010.1 Protein Homology CDS 158052 159503 . + 0 ID=cds-WP_002211550.1;Parent=gene-AD853_RS11215;Dbxref=GenBank:WP_002211550.1;Name=WP_002211550.1;gbkey=CDS;gene=trkH;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224489.1;locus_tag=AD853_RS11215;product=Trk system potassium transporter TrkH;protein_id=WP_002211550.1;transl_table=11 NZ_CPUY01000010.1 RefSeq gene 159525 160058 . + . ID=gene-AD853_RS11220;Name=hemG;gbkey=Gene;gene=hemG;gene_biotype=protein_coding;locus_tag=AD853_RS11220;old_locus_tag=ERS008462_02271 NZ_CPUY01000010.1 Protein Homology CDS 159525 160058 . + 0 ID=cds-WP_002215920.1;Parent=gene-AD853_RS11220;Dbxref=GenBank:WP_002215920.1;Name=WP_002215920.1;gbkey=CDS;gene=hemG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002215920.1;locus_tag=AD853_RS11220;product=menaquinone-dependent protoporphyrinogen IX dehydrogenase;protein_id=WP_002215920.1;transl_table=11 ##sequence-region NZ_CPUY01000011.1 1 158002 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=633 NZ_CPUY01000011.1 RefSeq region 1 158002 . + . ID=NZ_CPUY01000011.1:1..158002;Dbxref=taxon:633;collection-date=1900/2008;country=South Africa;gbkey=Src;genome=genomic;isolation-source=not known;mol_type=genomic DNA;nat-host=pig;serovar=O:3;strain=IP32544 NZ_CPUY01000011.1 RefSeq gene 130 2703 . - . ID=gene-AD853_RS11225;Name=clpB;gbkey=Gene;gene=clpB;gene_biotype=protein_coding;locus_tag=AD853_RS11225;old_locus_tag=ERS008462_02272 NZ_CPUY01000011.1 Protein Homology CDS 130 2703 . - 0 ID=cds-WP_002423906.1;Parent=gene-AD853_RS11225;Dbxref=GenBank:WP_002423906.1;Name=WP_002423906.1;Ontology_term=GO:0009408,GO:0042026,GO:0005524,GO:0016887;gbkey=CDS;gene=clpB;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=response to heat|0009408||IEA,protein refolding|0042026||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002461515.1;locus_tag=AD853_RS11225;product=ATP-dependent chaperone ClpB;protein_id=WP_002423906.1;transl_table=11 NZ_CPUY01000011.1 RefSeq gene 2833 3564 . - . ID=gene-AD853_RS11230;Name=yfiH;gbkey=Gene;gene=yfiH;gene_biotype=protein_coding;locus_tag=AD853_RS11230;old_locus_tag=ERS008462_02273 NZ_CPUY01000011.1 Protein Homology CDS 2833 3564 . - 0 ID=cds-WP_050124600.1;Parent=gene-AD853_RS11230;Dbxref=GenBank:WP_050124600.1;Name=WP_050124600.1;Ontology_term=GO:0004000,GO:0004731,GO:0042803;gbkey=CDS;gene=yfiH;go_function=adenosine deaminase activity|0004000||IEA,purine-nucleoside phosphorylase activity|0004731||IEA,protein homodimerization activity|0042803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209471.1;locus_tag=AD853_RS11230;product=purine nucleoside phosphorylase YfiH;protein_id=WP_050124600.1;transl_table=11 NZ_CPUY01000011.1 RefSeq gene 3566 4543 . - . ID=gene-AD853_RS11235;Name=rluD;gbkey=Gene;gene=rluD;gene_biotype=protein_coding;locus_tag=AD853_RS11235;old_locus_tag=ERS008462_02274 NZ_CPUY01000011.1 Protein Homology CDS 3566 4543 . - 0 ID=cds-WP_038824609.1;Parent=gene-AD853_RS11235;Dbxref=GenBank:WP_038824609.1;Name=WP_038824609.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;gene=rluD;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016603421.1;locus_tag=AD853_RS11235;product=23S rRNA pseudouridine(1911/1915/1917) synthase RluD;protein_id=WP_038824609.1;transl_table=11 NZ_CPUY01000011.1 RefSeq gene 4679 5410 . + . ID=gene-AD853_RS11240;Name=bamD;gbkey=Gene;gene=bamD;gene_biotype=protein_coding;locus_tag=AD853_RS11240;old_locus_tag=ERS008462_02275 NZ_CPUY01000011.1 Protein Homology CDS 4679 5410 . + 0 ID=cds-WP_002209469.1;Parent=gene-AD853_RS11240;Dbxref=GenBank:WP_002209469.1;Name=WP_002209469.1;gbkey=CDS;gene=bamD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004723105.1;locus_tag=AD853_RS11240;product=outer membrane protein assembly factor BamD;protein_id=WP_002209469.1;transl_table=11 NZ_CPUY01000011.1 RefSeq gene 5765 6127 . + . ID=gene-AD853_RS11245;Name=raiA;gbkey=Gene;gene=raiA;gene_biotype=protein_coding;locus_tag=AD853_RS11245;old_locus_tag=ERS008462_02276 NZ_CPUY01000011.1 Protein Homology CDS 5765 6127 . + 0 ID=cds-WP_002209468.1;Parent=gene-AD853_RS11245;Dbxref=GenBank:WP_002209468.1;Name=WP_002209468.1;gbkey=CDS;gene=raiA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012413503.1;locus_tag=AD853_RS11245;product=ribosome-associated translation inhibitor RaiA;protein_id=WP_002209468.1;transl_table=11 NZ_CPUY01000011.1 cmsearch sequence_feature 6261 6385 . + . ID=id-NZ_CPUY01000011.1:6261..6385;Dbxref=RFAM:RF01859;Note=Phe leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.5 NZ_CPUY01000011.1 RefSeq gene 6489 7646 . + . ID=gene-AD853_RS11250;Name=pheA;gbkey=Gene;gene=pheA;gene_biotype=protein_coding;locus_tag=AD853_RS11250;old_locus_tag=ERS008462_02278 NZ_CPUY01000011.1 Protein Homology CDS 6489 7646 . + 0 ID=cds-WP_038824608.1;Parent=gene-AD853_RS11250;Dbxref=GenBank:WP_038824608.1;Name=WP_038824608.1;Ontology_term=GO:0009094,GO:0046417,GO:0004106,GO:0004664;gbkey=CDS;gene=pheA;go_function=chorismate mutase activity|0004106||IEA,prephenate dehydratase activity|0004664||IEA;go_process=L-phenylalanine biosynthetic process|0009094||IEA,chorismate metabolic process|0046417||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002228330.1;locus_tag=AD853_RS11250;product=bifunctional chorismate mutase/prephenate dehydratase;protein_id=WP_038824608.1;transl_table=11 NZ_CPUY01000011.1 RefSeq gene 7751 8872 . - . ID=gene-AD853_RS11255;Name=tyrA;gbkey=Gene;gene=tyrA;gene_biotype=protein_coding;locus_tag=AD853_RS11255;old_locus_tag=ERS008462_02279 NZ_CPUY01000011.1 Protein Homology CDS 7751 8872 . - 0 ID=cds-WP_002209465.1;Parent=gene-AD853_RS11255;Dbxref=GenBank:WP_002209465.1;Name=WP_002209465.1;Ontology_term=GO:0006571,GO:0046417,GO:0004106,GO:0004665,GO:0008977;gbkey=CDS;gene=tyrA;go_function=chorismate mutase activity|0004106||IEA,prephenate dehydrogenase (NADP+) activity|0004665||IEA,prephenate dehydrogenase (NAD+) activity|0008977||IEA;go_process=L-tyrosine biosynthetic process|0006571||IEA,chorismate metabolic process|0046417||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311490.1;locus_tag=AD853_RS11255;product=bifunctional chorismate mutase/prephenate dehydrogenase;protein_id=WP_002209465.1;transl_table=11 NZ_CPUY01000011.1 RefSeq gene 8885 9955 . - . ID=gene-AD853_RS11260;Name=AD853_RS11260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS11260;old_locus_tag=ERS008462_02280 NZ_CPUY01000011.1 Protein Homology CDS 8885 9955 . - 0 ID=cds-WP_002228238.1;Parent=gene-AD853_RS11260;Dbxref=GenBank:WP_002228238.1;Name=WP_002228238.1;Ontology_term=GO:0009073,GO:0016832;gbkey=CDS;go_function=aldehyde-lyase activity|0016832||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002228238.1;locus_tag=AD853_RS11260;product=3-deoxy-7-phosphoheptulonate synthase;protein_id=WP_002228238.1;transl_table=11 NZ_CPUY01000011.1 RefSeq gene 10188 10904 . + . ID=gene-AD853_RS11265;Name=btsR;gbkey=Gene;gene=btsR;gene_biotype=protein_coding;gene_synonym=yehT;locus_tag=AD853_RS11265;old_locus_tag=ERS008462_02281 NZ_CPUY01000011.1 Protein Homology CDS 10188 10904 . + 0 ID=cds-WP_038824607.1;Parent=gene-AD853_RS11265;Dbxref=GenBank:WP_038824607.1;Name=WP_038824607.1;gbkey=CDS;gene=btsR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105613.1;locus_tag=AD853_RS11265;product=two-component system response regulator BtsR;protein_id=WP_038824607.1;transl_table=11 NZ_CPUY01000011.1 RefSeq gene 11337 12680 . + . ID=gene-AD853_RS11270;Name=AD853_RS11270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS11270;old_locus_tag=ERS008462_02282 NZ_CPUY01000011.1 Protein Homology CDS 11337 12680 . + 0 ID=cds-WP_012105614.1;Parent=gene-AD853_RS11270;Dbxref=GenBank:WP_012105614.1;Name=WP_012105614.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105614.1;locus_tag=AD853_RS11270;product=anaerobic C4-dicarboxylate transporter;protein_id=WP_012105614.1;transl_table=11 NZ_CPUY01000011.1 RefSeq gene 13003 13770 . + . ID=gene-AD853_RS11275;Name=AD853_RS11275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS11275;old_locus_tag=ERS008462_02283 NZ_CPUY01000011.1 Protein Homology CDS 13003 13770 . + 0 ID=cds-WP_002209462.1;Parent=gene-AD853_RS11275;Dbxref=GenBank:WP_002209462.1;Name=WP_002209462.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004716690.1;locus_tag=AD853_RS11275;product=DUF481 domain-containing protein;protein_id=WP_002209462.1;transl_table=11 NZ_CPUY01000011.1 RefSeq gene 14016 14363 . - . ID=gene-AD853_RS11280;Name=rplS;gbkey=Gene;gene=rplS;gene_biotype=protein_coding;locus_tag=AD853_RS11280;old_locus_tag=ERS008462_02284 NZ_CPUY01000011.1 Protein Homology CDS 14016 14363 . - 0 ID=cds-WP_002209461.1;Parent=gene-AD853_RS11280;Dbxref=GenBank:WP_002209461.1;Name=WP_002209461.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplS;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004155938.1;locus_tag=AD853_RS11280;product=50S ribosomal protein L19;protein_id=WP_002209461.1;transl_table=11 NZ_CPUY01000011.1 RefSeq gene 14444 15184 . - . ID=gene-AD853_RS11285;Name=trmD;gbkey=Gene;gene=trmD;gene_biotype=protein_coding;locus_tag=AD853_RS11285;old_locus_tag=ERS008462_02285 NZ_CPUY01000011.1 Protein Homology CDS 14444 15184 . - 0 ID=cds-WP_002222284.1;Parent=gene-AD853_RS11285;Dbxref=GenBank:WP_002222284.1;Name=WP_002222284.1;Ontology_term=GO:0030488,GO:0052906;gbkey=CDS;gene=trmD;go_function=tRNA (guanine(37)-N1)-methyltransferase activity|0052906||IEA;go_process=tRNA methylation|0030488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004393426.1;locus_tag=AD853_RS11285;product=tRNA (guanosine(37)-N1)-methyltransferase TrmD;protein_id=WP_002222284.1;transl_table=11 NZ_CPUY01000011.1 RefSeq gene 15223 15771 . - . ID=gene-AD853_RS11290;Name=rimM;gbkey=Gene;gene=rimM;gene_biotype=protein_coding;locus_tag=AD853_RS11290;old_locus_tag=ERS008462_02286 NZ_CPUY01000011.1 Protein Homology CDS 15223 15771 . - 0 ID=cds-WP_038824606.1;Parent=gene-AD853_RS11290;Dbxref=GenBank:WP_038824606.1;Name=WP_038824606.1;Note=Essential for efficient processing of 16S rRNA;Ontology_term=GO:0006364,GO:0043022,GO:0005840;gbkey=CDS;gene=rimM;go_component=ribosome|0005840||IEA;go_function=ribosome binding|0043022||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011191812.1;locus_tag=AD853_RS11290;product=ribosome maturation factor RimM;protein_id=WP_038824606.1;transl_table=11 NZ_CPUY01000011.1 RefSeq gene 15793 16041 . - . ID=gene-AD853_RS11295;Name=rpsP;gbkey=Gene;gene=rpsP;gene_biotype=protein_coding;locus_tag=AD853_RS11295;old_locus_tag=ERS008462_02287 NZ_CPUY01000011.1 Protein Homology CDS 15793 16041 . - 0 ID=cds-WP_002209458.1;Parent=gene-AD853_RS11295;Dbxref=GenBank:WP_002209458.1;Name=WP_002209458.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsP;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209458.1;locus_tag=AD853_RS11295;product=30S ribosomal protein S16;protein_id=WP_002209458.1;transl_table=11 NZ_CPUY01000011.1 RefSeq gene 16269 17630 . - . ID=gene-AD853_RS11300;Name=ffh;gbkey=Gene;gene=ffh;gene_biotype=protein_coding;locus_tag=AD853_RS11300;old_locus_tag=ERS008462_02288 NZ_CPUY01000011.1 Protein Homology CDS 16269 17630 . - 0 ID=cds-WP_011191811.1;Parent=gene-AD853_RS11300;Dbxref=GenBank:WP_011191811.1;Name=WP_011191811.1;Ontology_term=GO:0009306,GO:0003924,GO:0005048,GO:0005525,GO:0048501;gbkey=CDS;gene=ffh;go_component=signal recognition particle%2C plasma membrane targeting|0048501||IEA;go_function=GTPase activity|0003924||IEA,signal sequence binding|0005048||IEA,GTP binding|0005525||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130432.1;locus_tag=AD853_RS11300;product=signal recognition particle protein;protein_id=WP_011191811.1;transl_table=11 NZ_CPUY01000011.1 RefSeq gene 17796 18587 . + . ID=gene-AD853_RS11305;Name=AD853_RS11305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS11305;old_locus_tag=ERS008462_02289 NZ_CPUY01000011.1 Protein Homology CDS 17796 18587 . + 0 ID=cds-WP_002209455.1;Parent=gene-AD853_RS11305;Dbxref=GenBank:WP_002209455.1;Name=WP_002209455.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015671002.1;locus_tag=AD853_RS11305;product=cytochrome C assembly family protein;protein_id=WP_002209455.1;transl_table=11 NZ_CPUY01000011.1 RefSeq gene 18659 19939 . + . ID=gene-AD853_RS11310;Name=AD853_RS11310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS11310;old_locus_tag=ERS008462_02290 NZ_CPUY01000011.1 Protein Homology CDS 18659 19939 . + 0 ID=cds-WP_162097907.1;Parent=gene-AD853_RS11310;Dbxref=GenBank:WP_162097907.1;Name=WP_162097907.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002354744.1;locus_tag=AD853_RS11310;product=HlyC/CorC family transporter;protein_id=WP_162097907.1;transl_table=11 NZ_CPUY01000011.1 RefSeq gene 20028 20543 . - . ID=gene-AD853_RS11315;Name=luxS;gbkey=Gene;gene=luxS;gene_biotype=protein_coding;locus_tag=AD853_RS11315;old_locus_tag=ERS008462_02291 NZ_CPUY01000011.1 Protein Homology CDS 20028 20543 . - 0 ID=cds-WP_002209453.1;Parent=gene-AD853_RS11315;Dbxref=GenBank:WP_002209453.1;Name=WP_002209453.1;gbkey=CDS;gene=luxS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417172.1;locus_tag=AD853_RS11315;product=S-ribosylhomocysteine lyase;protein_id=WP_002209453.1;transl_table=11 NZ_CPUY01000011.1 RefSeq gene 20711 22309 . - . ID=gene-AD853_RS11320;Name=gshA;gbkey=Gene;gene=gshA;gene_biotype=protein_coding;locus_tag=AD853_RS11320;old_locus_tag=ERS008462_02293 NZ_CPUY01000011.1 Protein Homology CDS 20711 22309 . - 0 ID=cds-WP_172957065.1;Parent=gene-AD853_RS11320;Dbxref=GenBank:WP_172957065.1;Name=WP_172957065.1;Ontology_term=GO:0006750,GO:0004357;gbkey=CDS;gene=gshA;go_function=glutamate-cysteine ligase activity|0004357||IEA;go_process=glutathione biosynthetic process|0006750||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209452.1;locus_tag=AD853_RS11320;product=glutamate--cysteine ligase;protein_id=WP_172957065.1;transl_table=11 NZ_CPUY01000011.1 RefSeq gene 22353 22781 . - . ID=gene-AD853_RS11325;Name=AD853_RS11325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS11325;old_locus_tag=ERS008462_02294 NZ_CPUY01000011.1 Protein Homology CDS 22353 22781 . - 0 ID=cds-WP_002209451.1;Parent=gene-AD853_RS11325;Dbxref=GenBank:WP_002209451.1;Name=WP_002209451.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209451.1;locus_tag=AD853_RS11325;product=YqaA family protein;protein_id=WP_002209451.1;transl_table=11 NZ_CPUY01000011.1 RefSeq gene 22778 23344 . - . ID=gene-AD853_RS11330;Name=yqaB;gbkey=Gene;gene=yqaB;gene_biotype=protein_coding;locus_tag=AD853_RS11330;old_locus_tag=ERS008462_02295 NZ_CPUY01000011.1 Protein Homology CDS 22778 23344 . - 0 ID=cds-WP_002209450.1;Parent=gene-AD853_RS11330;Dbxref=GenBank:WP_002209450.1;Name=WP_002209450.1;gbkey=CDS;gene=yqaB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005278443.1;locus_tag=AD853_RS11330;product=fructose-1-phosphate/6-phosphogluconate phosphatase;protein_id=WP_002209450.1;transl_table=11 NZ_CPUY01000011.1 RefSeq gene 23595 23734 . - . ID=gene-AD853_RS20640;Name=AD853_RS20640;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD853_RS20640 NZ_CPUY01000011.1 tRNAscan-SE tRNA 23595 23734 . - . ID=rna-AD853_RS20640;Parent=gene-AD853_RS20640;anticodon=(pos:complement(23698..23700));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD853_RS20640;product=tRNA-Arg NZ_CPUY01000011.1 tRNAscan-SE exon 23595 23734 . - . ID=exon-AD853_RS20640-1;Parent=rna-AD853_RS20640;anticodon=(pos:complement(23698..23700));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD853_RS20640;product=tRNA-Arg NZ_CPUY01000011.1 RefSeq gene 23814 23890 . - . ID=gene-AD853_RS11335;Name=AD853_RS11335;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD853_RS11335;old_locus_tag=ERS008462_02297 NZ_CPUY01000011.1 tRNAscan-SE tRNA 23814 23890 . - . ID=rna-AD853_RS11335;Parent=gene-AD853_RS11335;anticodon=(pos:complement(23854..23856));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD853_RS11335;product=tRNA-Arg NZ_CPUY01000011.1 tRNAscan-SE exon 23814 23890 . - . ID=exon-AD853_RS11335-1;Parent=rna-AD853_RS11335;anticodon=(pos:complement(23854..23856));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD853_RS11335;product=tRNA-Arg NZ_CPUY01000011.1 RefSeq gene 23948 24024 . - . ID=gene-AD853_RS11340;Name=AD853_RS11340;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD853_RS11340;old_locus_tag=ERS008462_02298 NZ_CPUY01000011.1 tRNAscan-SE tRNA 23948 24024 . - . ID=rna-AD853_RS11340;Parent=gene-AD853_RS11340;anticodon=(pos:complement(23988..23990));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD853_RS11340;product=tRNA-Arg NZ_CPUY01000011.1 tRNAscan-SE exon 23948 24024 . - . ID=exon-AD853_RS11340-1;Parent=rna-AD853_RS11340;anticodon=(pos:complement(23988..23990));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD853_RS11340;product=tRNA-Arg NZ_CPUY01000011.1 RefSeq gene 24033 24125 . - . ID=gene-AD853_RS11345;Name=AD853_RS11345;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD853_RS11345;old_locus_tag=ERS008462_02299 NZ_CPUY01000011.1 tRNAscan-SE tRNA 24033 24125 . - . ID=rna-AD853_RS11345;Parent=gene-AD853_RS11345;anticodon=(pos:complement(24089..24091));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD853_RS11345;product=tRNA-Ser NZ_CPUY01000011.1 tRNAscan-SE exon 24033 24125 . - . ID=exon-AD853_RS11345-1;Parent=rna-AD853_RS11345;anticodon=(pos:complement(24089..24091));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD853_RS11345;product=tRNA-Ser NZ_CPUY01000011.1 RefSeq gene 24488 24673 . - . ID=gene-AD853_RS11350;Name=csrA;gbkey=Gene;gene=csrA;gene_biotype=protein_coding;locus_tag=AD853_RS11350;old_locus_tag=ERS008462_02300 NZ_CPUY01000011.1 Protein Homology CDS 24488 24673 . - 0 ID=cds-WP_002209449.1;Parent=gene-AD853_RS11350;Dbxref=GenBank:WP_002209449.1;Name=WP_002209449.1;gbkey=CDS;gene=csrA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004155916.1;locus_tag=AD853_RS11350;product=carbon storage regulator CsrA;protein_id=WP_002209449.1;transl_table=11 NZ_CPUY01000011.1 RefSeq gene 24923 27550 . - . ID=gene-AD853_RS11355;Name=alaS;gbkey=Gene;gene=alaS;gene_biotype=protein_coding;locus_tag=AD853_RS11355;old_locus_tag=ERS008462_02301 NZ_CPUY01000011.1 Protein Homology CDS 24923 27550 . - 0 ID=cds-WP_038824978.1;Parent=gene-AD853_RS11355;Dbxref=GenBank:WP_038824978.1;Name=WP_038824978.1;Ontology_term=GO:0006419,GO:0000166,GO:0004813,GO:0005737;gbkey=CDS;gene=alaS;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,alanine-tRNA ligase activity|0004813||IEA;go_process=alanyl-tRNA aminoacylation|0006419||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209448.1;locus_tag=AD853_RS11355;product=alanine--tRNA ligase;protein_id=WP_038824978.1;transl_table=11 NZ_CPUY01000011.1 RefSeq gene 27690 28238 . - . ID=gene-AD853_RS11360;Name=recX;gbkey=Gene;gene=recX;gene_biotype=protein_coding;locus_tag=AD853_RS11360;old_locus_tag=ERS008462_02302 NZ_CPUY01000011.1 Protein Homology CDS 27690 28238 . - 0 ID=cds-WP_011191807.1;Parent=gene-AD853_RS11360;Dbxref=GenBank:WP_011191807.1;Name=WP_011191807.1;gbkey=CDS;gene=recX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209447.1;locus_tag=AD853_RS11360;product=recombination regulator RecX;protein_id=WP_011191807.1;transl_table=11 NZ_CPUY01000011.1 RefSeq gene 28376 29446 . - . ID=gene-AD853_RS11365;Name=recA;gbkey=Gene;gene=recA;gene_biotype=protein_coding;locus_tag=AD853_RS11365;old_locus_tag=ERS008462_02303 NZ_CPUY01000011.1 Protein Homology CDS 28376 29446 . - 0 ID=cds-WP_002209446.1;Parent=gene-AD853_RS11365;Dbxref=GenBank:WP_002209446.1;Name=WP_002209446.1;Ontology_term=GO:0006281,GO:0003677,GO:0003697,GO:0005524,GO:0008094;gbkey=CDS;gene=recA;go_function=DNA binding|0003677||IEA,single-stranded DNA binding|0003697||IEA,ATP binding|0005524||IEA,ATP-dependent activity%2C acting on DNA|0008094||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209446.1;locus_tag=AD853_RS11365;product=recombinase RecA;protein_id=WP_002209446.1;transl_table=11 NZ_CPUY01000011.1 RefSeq gene 29561 30049 . - . ID=gene-AD853_RS11370;Name=pncC;gbkey=Gene;gene=pncC;gene_biotype=protein_coding;locus_tag=AD853_RS11370;old_locus_tag=ERS008462_02304 NZ_CPUY01000011.1 Protein Homology CDS 29561 30049 . - 0 ID=cds-WP_002209445.1;Parent=gene-AD853_RS11370;Dbxref=GenBank:WP_002209445.1;Name=WP_002209445.1;gbkey=CDS;gene=pncC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209445.1;locus_tag=AD853_RS11370;product=nicotinamide-nucleotide amidase;protein_id=WP_002209445.1;transl_table=11 NZ_CPUY01000011.1 RefSeq gene 30366 31706 . + . ID=gene-AD853_RS11375;Name=AD853_RS11375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS11375;old_locus_tag=ERS008462_02305 NZ_CPUY01000011.1 Protein Homology CDS 30366 31706 . + 0 ID=cds-WP_002209444.1;Parent=gene-AD853_RS11375;Dbxref=GenBank:WP_002209444.1;Name=WP_002209444.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209444.1;locus_tag=AD853_RS11375;product=MFS transporter;protein_id=WP_002209444.1;transl_table=11 NZ_CPUY01000011.1 RefSeq gene 31954 32898 . + . ID=gene-AD853_RS11380;Name=AD853_RS11380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS11380;old_locus_tag=ERS008462_02306 NZ_CPUY01000011.1 Protein Homology CDS 31954 32898 . + 0 ID=cds-WP_002209443.1;Parent=gene-AD853_RS11380;Dbxref=GenBank:WP_002209443.1;Name=WP_002209443.1;Ontology_term=GO:0006355,GO:0003677,GO:0030246;gbkey=CDS;go_function=DNA binding|0003677||IEA,carbohydrate binding|0030246||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209443.1;locus_tag=AD853_RS11380;product=sugar-binding transcriptional regulator;protein_id=WP_002209443.1;transl_table=11 NZ_CPUY01000011.1 RefSeq gene 33120 34544 . - . ID=gene-AD853_RS11390;Name=AD853_RS11390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS11390;old_locus_tag=ERS008462_02307 NZ_CPUY01000011.1 Protein Homology CDS 33120 34544 . - 0 ID=cds-WP_032466123.1;Parent=gene-AD853_RS11390;Dbxref=GenBank:WP_032466123.1;Name=WP_032466123.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209441.1;locus_tag=AD853_RS11390;product=L-fucose/L-arabinose isomerase family protein;protein_id=WP_032466123.1;transl_table=11 NZ_CPUY01000011.1 RefSeq gene 34565 36052 . - . ID=gene-AD853_RS11395;Name=AD853_RS11395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS11395;old_locus_tag=ERS008462_02308 NZ_CPUY01000011.1 Protein Homology CDS 34565 36052 . - 0 ID=cds-WP_038824976.1;Parent=gene-AD853_RS11395;Dbxref=GenBank:WP_038824976.1;Name=WP_038824976.1;Ontology_term=GO:0005975,GO:0006072,GO:0016310,GO:0005524,GO:0016301;gbkey=CDS;go_function=ATP binding|0005524||IEA,kinase activity|0016301||IEA;go_process=carbohydrate metabolic process|0005975||IEA,glycerol-3-phosphate metabolic process|0006072||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209440.1;locus_tag=AD853_RS11395;product=FGGY family carbohydrate kinase;protein_id=WP_038824976.1;transl_table=11 NZ_CPUY01000011.1 RefSeq gene 36055 36999 . - . ID=gene-AD853_RS11400;Name=AD853_RS11400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS11400;old_locus_tag=ERS008462_02309 NZ_CPUY01000011.1 Protein Homology CDS 36055 36999 . - 0 ID=cds-WP_002209439.1;Parent=gene-AD853_RS11400;Dbxref=GenBank:WP_002209439.1;Name=WP_002209439.1;Ontology_term=GO:0016740;gbkey=CDS;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019080366.1;locus_tag=AD853_RS11400;product=transketolase family protein;protein_id=WP_002209439.1;transl_table=11 NZ_CPUY01000011.1 RefSeq gene 36992 37822 . - . ID=gene-AD853_RS11405;Name=AD853_RS11405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS11405;old_locus_tag=ERS008462_02310 NZ_CPUY01000011.1 Protein Homology CDS 36992 37822 . - 0 ID=cds-WP_002209438.1;Parent=gene-AD853_RS11405;Dbxref=GenBank:WP_002209438.1;Name=WP_002209438.1;Ontology_term=GO:0016740;gbkey=CDS;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004130310.1;locus_tag=AD853_RS11405;product=transketolase;protein_id=WP_002209438.1;transl_table=11 NZ_CPUY01000011.1 RefSeq gene 38078 39220 . - . ID=gene-AD853_RS11410;Name=AD853_RS11410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS11410;old_locus_tag=ERS008462_02311 NZ_CPUY01000011.1 Protein Homology CDS 38078 39220 . - 0 ID=cds-WP_002354764.1;Parent=gene-AD853_RS11410;Dbxref=GenBank:WP_002354764.1;Name=WP_002354764.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002354764.1;locus_tag=AD853_RS11410;product=ABC transporter permease;protein_id=WP_002354764.1;transl_table=11 NZ_CPUY01000011.1 RefSeq gene 39220 40743 . - . ID=gene-AD853_RS11415;Name=AD853_RS11415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS11415;old_locus_tag=ERS008462_02312 NZ_CPUY01000011.1 Protein Homology CDS 39220 40743 . - 0 ID=cds-WP_011191801.1;Parent=gene-AD853_RS11415;Dbxref=GenBank:WP_011191801.1;Name=WP_011191801.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012229166.1;locus_tag=AD853_RS11415;product=sugar ABC transporter ATP-binding protein;protein_id=WP_011191801.1;transl_table=11 NZ_CPUY01000011.1 RefSeq gene 40743 41360 . - . ID=gene-AD853_RS11420;Name=AD853_RS11420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS11420;old_locus_tag=ERS008462_02313 NZ_CPUY01000011.1 Protein Homology CDS 40743 41360 . - 0 ID=cds-WP_002209435.1;Parent=gene-AD853_RS11420;Dbxref=GenBank:WP_002209435.1;Name=WP_002209435.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209435.1;locus_tag=AD853_RS11420;product=DUF2291 family protein;protein_id=WP_002209435.1;transl_table=11 NZ_CPUY01000011.1 RefSeq gene 41453 42394 . - . ID=gene-AD853_RS11425;Name=AD853_RS11425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS11425;old_locus_tag=ERS008462_02314 NZ_CPUY01000011.1 Protein Homology CDS 41453 42394 . - 0 ID=cds-WP_038823856.1;Parent=gene-AD853_RS11425;Dbxref=GenBank:WP_038823856.1;Name=WP_038823856.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011191800.1;locus_tag=AD853_RS11425;product=D-ribose ABC transporter substrate-binding protein;protein_id=WP_038823856.1;transl_table=11 NZ_CPUY01000011.1 RefSeq gene 42930 45143 . + . ID=gene-AD853_RS11430;Name=katG;gbkey=Gene;gene=katG;gene_biotype=protein_coding;locus_tag=AD853_RS11430;old_locus_tag=ERS008462_02315 NZ_CPUY01000011.1 Protein Homology CDS 42930 45143 . + 0 ID=cds-WP_002209433.1;Parent=gene-AD853_RS11430;Dbxref=GenBank:WP_002209433.1;Name=WP_002209433.1;Ontology_term=GO:0006979,GO:0004096,GO:0004601,GO:0020037;gbkey=CDS;gene=katG;go_function=catalase activity|0004096||IEA,peroxidase activity|0004601||IEA,heme binding|0020037||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209433.1;locus_tag=AD853_RS11430;product=catalase/peroxidase HPI;protein_id=WP_002209433.1;transl_table=11 NZ_CPUY01000011.1 RefSeq gene 45220 45603 . + . ID=gene-AD853_RS11435;Name=cybC;gbkey=Gene;gene=cybC;gene_biotype=protein_coding;locus_tag=AD853_RS11435;old_locus_tag=ERS008462_02316 NZ_CPUY01000011.1 Protein Homology CDS 45220 45603 . + 0 ID=cds-WP_038823857.1;Parent=gene-AD853_RS11435;Dbxref=GenBank:WP_038823857.1;Name=WP_038823857.1;Ontology_term=GO:0022900,GO:0005506,GO:0009055,GO:0042597;gbkey=CDS;gene=cybC;go_component=periplasmic space|0042597||IEA;go_function=iron ion binding|0005506||IEA,electron transfer activity|0009055||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011191799.1;locus_tag=AD853_RS11435;product=cytochrome b562;protein_id=WP_038823857.1;transl_table=11 NZ_CPUY01000011.1 RefSeq gene 45750 46280 . + . ID=gene-AD853_RS11440;Name=cybB;gbkey=Gene;gene=cybB;gene_biotype=protein_coding;locus_tag=AD853_RS11440;old_locus_tag=ERS008462_02317 NZ_CPUY01000011.1 Protein Homology CDS 45750 46280 . + 0 ID=cds-WP_038823858.1;Parent=gene-AD853_RS11440;Dbxref=GenBank:WP_038823858.1;Name=WP_038823858.1;Ontology_term=GO:0022904,GO:0009055,GO:0016020;gbkey=CDS;gene=cybB;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA;go_process=respiratory electron transport chain|0022904||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011191798.1;locus_tag=AD853_RS11440;product=cytochrome b561;protein_id=WP_038823858.1;transl_table=11 NZ_CPUY01000011.1 RefSeq gene 46538 47218 . - . ID=gene-AD853_RS11445;Name=dmsD;gbkey=Gene;gene=dmsD;gene_biotype=protein_coding;locus_tag=AD853_RS11445;old_locus_tag=ERS008462_02318 NZ_CPUY01000011.1 Protein Homology CDS 46538 47218 . - 0 ID=cds-WP_038823859.1;Parent=gene-AD853_RS11445;Dbxref=GenBank:WP_038823859.1;Name=WP_038823859.1;gbkey=CDS;gene=dmsD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209430.1;locus_tag=AD853_RS11445;product=Tat proofreading chaperone DmsD;protein_id=WP_038823859.1;transl_table=11 NZ_CPUY01000011.1 RefSeq gene 47490 48350 . - . ID=gene-AD853_RS11450;Name=AD853_RS11450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS11450;old_locus_tag=ERS008462_02319 NZ_CPUY01000011.1 Protein Homology CDS 47490 48350 . - 0 ID=cds-WP_011191796.1;Parent=gene-AD853_RS11450;Dbxref=GenBank:WP_011191796.1;Name=WP_011191796.1;Ontology_term=GO:0009061,GO:0019645,GO:0009389,GO:0005886,GO:0009390;gbkey=CDS;go_component=plasma membrane|0005886||IEA,dimethyl sulfoxide reductase complex|0009390||IEA;go_function=dimethyl sulfoxide reductase activity|0009389||IEA;go_process=anaerobic respiration|0009061||IEA,anaerobic electron transport chain|0019645||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209429.1;locus_tag=AD853_RS11450;product=dimethyl sulfoxide reductase anchor subunit family protein;protein_id=WP_011191796.1;transl_table=11 NZ_CPUY01000011.1 RefSeq gene 48352 48969 . - . ID=gene-AD853_RS11455;Name=AD853_RS11455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS11455;old_locus_tag=ERS008462_02320 NZ_CPUY01000011.1 Protein Homology CDS 48352 48969 . - 0 ID=cds-WP_002209428.1;Parent=gene-AD853_RS11455;Dbxref=GenBank:WP_002209428.1;Name=WP_002209428.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000213046.1;locus_tag=AD853_RS11455;product=DMSO/selenate family reductase complex B subunit;protein_id=WP_002209428.1;transl_table=11 NZ_CPUY01000011.1 RefSeq gene 48981 51431 . - . ID=gene-AD853_RS11460;Name=dmsA;gbkey=Gene;gene=dmsA;gene_biotype=protein_coding;locus_tag=AD853_RS11460;old_locus_tag=ERS008462_02321 NZ_CPUY01000011.1 Protein Homology CDS 48981 51431 . - 0 ID=cds-WP_050124601.1;Parent=gene-AD853_RS11460;Dbxref=GenBank:WP_050124601.1;Name=WP_050124601.1;Ontology_term=GO:0009389,GO:0030151;gbkey=CDS;gene=dmsA;go_function=dimethyl sulfoxide reductase activity|0009389||IEA,molybdenum ion binding|0030151||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019080377.1;locus_tag=AD853_RS11460;product=dimethylsulfoxide reductase subunit A;protein_id=WP_050124601.1;transl_table=11 NZ_CPUY01000011.1 RefSeq gene 51880 52575 . - . ID=gene-AD853_RS11465;Name=AD853_RS11465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS11465;old_locus_tag=ERS008462_02322 NZ_CPUY01000011.1 Protein Homology CDS 51880 52575 . - 0 ID=cds-WP_002209426.1;Parent=gene-AD853_RS11465;Dbxref=GenBank:WP_002209426.1;Name=WP_002209426.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019083158.1;locus_tag=AD853_RS11465;product=L-ribulose-5-phosphate 4-epimerase;protein_id=WP_002209426.1;transl_table=11 NZ_CPUY01000011.1 RefSeq gene 53278 54087 . + . ID=gene-AD853_RS11470;Name=AD853_RS11470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS11470;old_locus_tag=ERS008462_02323 NZ_CPUY01000011.1 Protein Homology CDS 53278 54087 . + 0 ID=cds-WP_002231122.1;Parent=gene-AD853_RS11470;Dbxref=GenBank:WP_002231122.1;Name=WP_002231122.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209424.1;locus_tag=AD853_RS11470;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_002231122.1;transl_table=11 NZ_CPUY01000011.1 RefSeq gene 54248 55252 . + . ID=gene-AD853_RS11475;Name=AD853_RS11475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS11475;old_locus_tag=ERS008462_02324 NZ_CPUY01000011.1 Protein Homology CDS 54248 55252 . + 0 ID=cds-WP_002216011.1;Parent=gene-AD853_RS11475;Dbxref=GenBank:WP_002216011.1;Name=WP_002216011.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002216011.1;locus_tag=AD853_RS11475;product=substrate-binding domain-containing protein;protein_id=WP_002216011.1;transl_table=11 NZ_CPUY01000011.1 RefSeq gene 55401 56915 . + . ID=gene-AD853_RS11480;Name=AD853_RS11480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS11480;old_locus_tag=ERS008462_02325 NZ_CPUY01000011.1 Protein Homology CDS 55401 56915 . + 0 ID=cds-WP_038823861.1;Parent=gene-AD853_RS11480;Dbxref=GenBank:WP_038823861.1;Name=WP_038823861.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011191791.1;locus_tag=AD853_RS11480;product=sugar ABC transporter ATP-binding protein;protein_id=WP_038823861.1;transl_table=11 NZ_CPUY01000011.1 RefSeq gene 56908 57897 . + . ID=gene-AD853_RS11485;Name=AD853_RS11485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS11485;old_locus_tag=ERS008462_02326 NZ_CPUY01000011.1 Protein Homology CDS 56908 57897 . + 0 ID=cds-WP_038823862.1;Parent=gene-AD853_RS11485;Dbxref=GenBank:WP_038823862.1;Name=WP_038823862.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105633.1;locus_tag=AD853_RS11485;product=ABC transporter permease;protein_id=WP_038823862.1;transl_table=11 NZ_CPUY01000011.1 RefSeq gene 57910 58947 . + . ID=gene-AD853_RS11490;Name=AD853_RS11490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS11490;old_locus_tag=ERS008462_02327 NZ_CPUY01000011.1 Protein Homology CDS 57910 58947 . + 0 ID=cds-WP_050124602.1;Parent=gene-AD853_RS11490;Dbxref=GenBank:WP_050124602.1;Name=WP_050124602.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002231123.1;locus_tag=AD853_RS11490;product=ABC transporter permease;protein_id=WP_050124602.1;transl_table=11 NZ_CPUY01000011.1 RefSeq gene 59031 59912 . + . ID=gene-AD853_RS11495;Name=AD853_RS11495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS11495;old_locus_tag=ERS008462_02328 NZ_CPUY01000011.1 Protein Homology CDS 59031 59912 . + 0 ID=cds-WP_038825671.1;Parent=gene-AD853_RS11495;Dbxref=GenBank:WP_038825671.1;Name=WP_038825671.1;Ontology_term=GO:0005975,GO:0016861;gbkey=CDS;go_function=intramolecular oxidoreductase activity%2C interconverting aldoses and ketoses|0016861||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209420.1;locus_tag=AD853_RS11495;product=L-ribulose-5-phosphate 3-epimerase;protein_id=WP_038825671.1;transl_table=11 NZ_CPUY01000011.1 RefSeq gene 59923 61419 . + . ID=gene-AD853_RS11500;Name=AD853_RS11500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS11500;old_locus_tag=ERS008462_02329 NZ_CPUY01000011.1 Protein Homology CDS 59923 61419 . + 0 ID=cds-WP_038823866.1;Parent=gene-AD853_RS11500;Dbxref=GenBank:WP_038823866.1;Name=WP_038823866.1;Ontology_term=GO:0016310,GO:0005524,GO:0019200;gbkey=CDS;go_function=ATP binding|0005524||IEA,carbohydrate kinase activity|0019200||IEA;go_process=phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011191788.1;locus_tag=AD853_RS11500;product=FGGY-family carbohydrate kinase;protein_id=WP_038823866.1;transl_table=11 NZ_CPUY01000011.1 RefSeq gene 61817 63460 . + . ID=gene-AD853_RS11505;Name=fumA;gbkey=Gene;gene=fumA;gene_biotype=protein_coding;locus_tag=AD853_RS11505;old_locus_tag=ERS008462_02330 NZ_CPUY01000011.1 Protein Homology CDS 61817 63460 . + 0 ID=cds-WP_002209418.1;Parent=gene-AD853_RS11505;Dbxref=GenBank:WP_002209418.1;Name=WP_002209418.1;gbkey=CDS;gene=fumA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016266697.1;locus_tag=AD853_RS11505;product=class I fumarate hydratase FumA;protein_id=WP_002209418.1;transl_table=11 NZ_CPUY01000011.1 RefSeq gene 63643 63894 . + . ID=gene-AD853_RS11510;Name=AD853_RS11510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS11510;old_locus_tag=ERS008462_02331 NZ_CPUY01000011.1 Protein Homology CDS 63643 63894 . + 0 ID=cds-WP_002209417.1;Parent=gene-AD853_RS11510;Dbxref=GenBank:WP_002209417.1;Name=WP_002209417.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209417.1;locus_tag=AD853_RS11510;product=ParD-like family protein;protein_id=WP_002209417.1;transl_table=11 NZ_CPUY01000011.1 RefSeq gene 63891 64676 . + . ID=gene-AD853_RS11515;Name=map;gbkey=Gene;gene=map;gene_biotype=protein_coding;locus_tag=AD853_RS11515;old_locus_tag=ERS008462_02332 NZ_CPUY01000011.1 Protein Homology CDS 63891 64676 . + 0 ID=cds-WP_002209416.1;Parent=gene-AD853_RS11515;Dbxref=GenBank:WP_002209416.1;Name=WP_002209416.1;Ontology_term=GO:0006508,GO:0070006;gbkey=CDS;gene=map;go_function=metalloaminopeptidase activity|0070006||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209416.1;locus_tag=AD853_RS11515;product=type I methionyl aminopeptidase;protein_id=WP_002209416.1;transl_table=11 NZ_CPUY01000011.1 RefSeq gene 64841 66133 . - . ID=gene-AD853_RS11520;Name=AD853_RS11520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS11520;old_locus_tag=ERS008462_02333 NZ_CPUY01000011.1 Protein Homology CDS 64841 66133 . - 0 ID=cds-WP_038823868.1;Parent=gene-AD853_RS11520;Dbxref=GenBank:WP_038823868.1;Name=WP_038823868.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105637.1;locus_tag=AD853_RS11520;product=ShET2/EspL2 family type III secretion system effector toxin;protein_id=WP_038823868.1;transl_table=11 NZ_CPUY01000011.1 RefSeq gene 66558 68654 . - . ID=gene-AD853_RS11525;Name=AD853_RS11525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS11525;old_locus_tag=ERS008462_02335 NZ_CPUY01000011.1 Protein Homology CDS 66558 68654 . - 0 ID=cds-WP_038823869.1;Parent=gene-AD853_RS11525;Dbxref=GenBank:WP_038823869.1;Name=WP_038823869.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002223222.1;locus_tag=AD853_RS11525;product=TonB-dependent receptor;protein_id=WP_038823869.1;transl_table=11 NZ_CPUY01000011.1 RefSeq gene 68827 69078 . + . ID=gene-AD853_RS11530;Name=AD853_RS11530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS11530;old_locus_tag=ERS008462_02336 NZ_CPUY01000011.1 Protein Homology CDS 68827 69078 . + 0 ID=cds-WP_038400365.1;Parent=gene-AD853_RS11530;Dbxref=GenBank:WP_038400365.1;Name=WP_038400365.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002223220.1;locus_tag=AD853_RS11530;product=hypothetical protein;protein_id=WP_038400365.1;transl_table=11 NZ_CPUY01000011.1 RefSeq gene 69315 70694 . + . ID=gene-AD853_RS11535;Name=AD853_RS11535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS11535;old_locus_tag=ERS008462_02337 NZ_CPUY01000011.1 Protein Homology CDS 69315 70694 . + 0 ID=cds-WP_038823870.1;Parent=gene-AD853_RS11535;Dbxref=GenBank:WP_038823870.1;Name=WP_038823870.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209412.1;locus_tag=AD853_RS11535;product=cytochrome c peroxidase;protein_id=WP_038823870.1;transl_table=11 NZ_CPUY01000011.1 RefSeq gene 70765 71529 . + . ID=gene-AD853_RS11540;Name=AD853_RS11540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS11540;old_locus_tag=ERS008462_02338 NZ_CPUY01000011.1 Protein Homology CDS 70765 71529 . + 0 ID=cds-WP_038823871.1;Parent=gene-AD853_RS11540;Dbxref=GenBank:WP_038823871.1;Name=WP_038823871.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209411.1;locus_tag=AD853_RS11540;product=transporter substrate-binding domain-containing protein;protein_id=WP_038823871.1;transl_table=11 NZ_CPUY01000011.1 RefSeq gene 71953 72156 . + . ID=gene-AD853_RS11545;Name=AD853_RS11545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS11545;old_locus_tag=ERS008462_02339 NZ_CPUY01000011.1 Protein Homology CDS 71953 72156 . + 0 ID=cds-WP_002209410.1;Parent=gene-AD853_RS11545;Dbxref=GenBank:WP_002209410.1;Name=WP_002209410.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209410.1;locus_tag=AD853_RS11545;product=hypothetical protein;protein_id=WP_002209410.1;transl_table=11 NZ_CPUY01000011.1 RefSeq gene 72367 72630 . + . ID=gene-AD853_RS11550;Name=AD853_RS11550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS11550;old_locus_tag=ERS008462_02340 NZ_CPUY01000011.1 Protein Homology CDS 72367 72630 . + 0 ID=cds-WP_002217994.1;Parent=gene-AD853_RS11550;Dbxref=GenBank:WP_002217994.1;Name=WP_002217994.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002217994.1;locus_tag=AD853_RS11550;product=FaeA/PapI family transcriptional regulator;protein_id=WP_002217994.1;transl_table=11 NZ_CPUY01000011.1 RefSeq gene 72894 73235 . + . ID=gene-AD853_RS11555;Name=AD853_RS11555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS11555;old_locus_tag=ERS008462_02341 NZ_CPUY01000011.1 Protein Homology CDS 72894 73235 . + 0 ID=cds-WP_012304554.1;Parent=gene-AD853_RS11555;Dbxref=GenBank:WP_012304554.1;Name=WP_012304554.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016605622.1;locus_tag=AD853_RS11555;product=transcriptional regulator;protein_id=WP_012304554.1;transl_table=11 NZ_CPUY01000011.1 RefSeq gene 73320 74609 . + . ID=gene-AD853_RS11560;Name=AD853_RS11560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS11560;old_locus_tag=ERS008462_02342 NZ_CPUY01000011.1 Protein Homology CDS 73320 74609 . + 0 ID=cds-WP_038823872.1;Parent=gene-AD853_RS11560;Dbxref=GenBank:WP_038823872.1;Name=WP_038823872.1;Ontology_term=GO:0046685,GO:0015105,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=arsenite transmembrane transporter activity|0015105||IEA;go_process=response to arsenic-containing substance|0046685||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012540054.1;locus_tag=AD853_RS11560;product=arsenic transporter;protein_id=WP_038823872.1;transl_table=11 NZ_CPUY01000011.1 RefSeq gene 75164 76135 . + . ID=gene-AD853_RS11565;Name=AD853_RS11565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS11565;old_locus_tag=ERS008462_02343 NZ_CPUY01000011.1 Protein Homology CDS 75164 76135 . + 0 ID=cds-WP_002209407.1;Parent=gene-AD853_RS11565;Dbxref=GenBank:WP_002209407.1;Name=WP_002209407.1;Ontology_term=GO:0006355,GO:0003677,GO:0030246;gbkey=CDS;go_function=DNA binding|0003677||IEA,carbohydrate binding|0030246||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209407.1;locus_tag=AD853_RS11565;product=sugar-binding transcriptional regulator;protein_id=WP_002209407.1;transl_table=11 NZ_CPUY01000011.1 RefSeq gene 76256 76930 . - . ID=gene-AD853_RS11570;Name=dhaL;gbkey=Gene;gene=dhaL;gene_biotype=protein_coding;locus_tag=AD853_RS11570;old_locus_tag=ERS008462_02344 NZ_CPUY01000011.1 Protein Homology CDS 76256 76930 . - 0 ID=cds-WP_038823873.1;Parent=gene-AD853_RS11570;Dbxref=GenBank:WP_038823873.1;Name=WP_038823873.1;Ontology_term=GO:0006071,GO:0047324;gbkey=CDS;gene=dhaL;go_function=phosphoenolpyruvate-glycerone phosphotransferase activity|0047324||IEA;go_process=glycerol metabolic process|0006071||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209406.1;locus_tag=AD853_RS11570;product=dihydroxyacetone kinase subunit DhaL;protein_id=WP_038823873.1;transl_table=11 NZ_CPUY01000011.1 RefSeq gene 76937 77938 . - . ID=gene-AD853_RS11575;Name=AD853_RS11575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS11575;old_locus_tag=ERS008462_02345 NZ_CPUY01000011.1 Protein Homology CDS 76937 77938 . - 0 ID=cds-WP_002228229.1;Parent=gene-AD853_RS11575;Dbxref=GenBank:WP_002228229.1;Name=WP_002228229.1;Ontology_term=GO:0006071,GO:0004371;gbkey=CDS;go_function=glycerone kinase activity|0004371||IEA;go_process=glycerol metabolic process|0006071||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105641.1;locus_tag=AD853_RS11575;product=dihydroxyacetone kinase subunit DhaK;protein_id=WP_002228229.1;transl_table=11 NZ_CPUY01000011.1 RefSeq gene 78025 78795 . - . ID=gene-AD853_RS11580;Name=AD853_RS11580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS11580;old_locus_tag=ERS008462_02346 NZ_CPUY01000011.1 Protein Homology CDS 78025 78795 . - 0 ID=cds-WP_002209404.1;Parent=gene-AD853_RS11580;Dbxref=GenBank:WP_002209404.1;Name=WP_002209404.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209404.1;locus_tag=AD853_RS11580;product=SDR family oxidoreductase;protein_id=WP_002209404.1;transl_table=11 NZ_CPUY01000011.1 RefSeq gene 78859 79974 . - . ID=gene-AD853_RS11585;Name=AD853_RS11585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS11585;old_locus_tag=ERS008462_02347 NZ_CPUY01000011.1 Protein Homology CDS 78859 79974 . - 0 ID=cds-WP_002209403.1;Parent=gene-AD853_RS11585;Dbxref=GenBank:WP_002209403.1;Name=WP_002209403.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209403.1;locus_tag=AD853_RS11585;product=erythritol/L-threitol dehydrogenase;protein_id=WP_002209403.1;transl_table=11 NZ_CPUY01000011.1 RefSeq gene 80457 80912 . + . ID=gene-AD853_RS11590;Name=rpiB;gbkey=Gene;gene=rpiB;gene_biotype=protein_coding;locus_tag=AD853_RS11590;old_locus_tag=ERS008462_02348 NZ_CPUY01000011.1 Protein Homology CDS 80457 80912 . + 0 ID=cds-WP_002209402.1;Parent=gene-AD853_RS11590;Dbxref=GenBank:WP_002209402.1;Name=WP_002209402.1;Ontology_term=GO:0009052,GO:0004751;gbkey=CDS;gene=rpiB;go_function=ribose-5-phosphate isomerase activity|0004751||IEA;go_process=pentose-phosphate shunt%2C non-oxidative branch|0009052||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016581148.1;locus_tag=AD853_RS11590;product=ribose 5-phosphate isomerase B;protein_id=WP_002209402.1;transl_table=11 NZ_CPUY01000011.1 RefSeq gene 81736 84291 . + . ID=gene-AD853_RS11600;Name=mutS;gbkey=Gene;gene=mutS;gene_biotype=protein_coding;locus_tag=AD853_RS11600;old_locus_tag=ERS008462_02349 NZ_CPUY01000011.1 Protein Homology CDS 81736 84291 . + 0 ID=cds-WP_011191781.1;Parent=gene-AD853_RS11600;Dbxref=GenBank:WP_011191781.1;Name=WP_011191781.1;Ontology_term=GO:0006298,GO:0005524,GO:0030983;gbkey=CDS;gene=mutS;go_function=ATP binding|0005524||IEA,mismatched DNA binding|0030983||IEA;go_process=mismatch repair|0006298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011815614.1;locus_tag=AD853_RS11600;product=DNA mismatch repair protein MutS;protein_id=WP_011191781.1;transl_table=11 NZ_CPUY01000011.1 RefSeq gene 84640 85638 . - . ID=gene-AD853_RS11605;Name=rpoS;gbkey=Gene;gene=rpoS;gene_biotype=protein_coding;locus_tag=AD853_RS11605;old_locus_tag=ERS008462_02350 NZ_CPUY01000011.1 Protein Homology CDS 84640 85638 . - 0 ID=cds-WP_011191780.1;Parent=gene-AD853_RS11605;Dbxref=GenBank:WP_011191780.1;Name=WP_011191780.1;Ontology_term=GO:0006352,GO:0006355,GO:0003677,GO:0003700,GO:0016987;gbkey=CDS;gene=rpoS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000081498.1;locus_tag=AD853_RS11605;product=RNA polymerase sigma factor RpoS;protein_id=WP_011191780.1;transl_table=11 NZ_CPUY01000011.1 RefSeq gene 85693 86676 . - . ID=gene-AD853_RS11610;Name=nlpD;gbkey=Gene;gene=nlpD;gene_biotype=protein_coding;locus_tag=AD853_RS11610;old_locus_tag=ERS008462_02351 NZ_CPUY01000011.1 Protein Homology CDS 85693 86676 . - 0 ID=cds-WP_012304557.1;Parent=gene-AD853_RS11610;Dbxref=GenBank:WP_012304557.1;Name=WP_012304557.1;gbkey=CDS;gene=nlpD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304557.1;locus_tag=AD853_RS11610;product=murein hydrolase activator NlpD;protein_id=WP_012304557.1;transl_table=11 NZ_CPUY01000011.1 RefSeq gene 86798 87424 . - . ID=gene-AD853_RS11615;Name=AD853_RS11615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS11615;old_locus_tag=ERS008462_02352 NZ_CPUY01000011.1 Protein Homology CDS 86798 87424 . - 0 ID=cds-WP_002209395.1;Parent=gene-AD853_RS11615;Dbxref=GenBank:WP_002209395.1;Name=WP_002209395.1;Ontology_term=GO:0036211,GO:0004719;gbkey=CDS;go_function=protein-L-isoaspartate (D-aspartate) O-methyltransferase activity|0004719||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130872.1;locus_tag=AD853_RS11615;product=protein-L-isoaspartate(D-aspartate) O-methyltransferase;protein_id=WP_002209395.1;transl_table=11 NZ_CPUY01000011.1 RefSeq gene 87418 88182 . - . ID=gene-AD853_RS11620;Name=surE;gbkey=Gene;gene=surE;gene_biotype=protein_coding;locus_tag=AD853_RS11620;old_locus_tag=ERS008462_02353 NZ_CPUY01000011.1 Protein Homology CDS 87418 88182 . - 0 ID=cds-WP_011191778.1;Parent=gene-AD853_RS11620;Dbxref=GenBank:WP_011191778.1;Name=WP_011191778.1;Ontology_term=GO:0008252;gbkey=CDS;gene=surE;go_function=nucleotidase activity|0008252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011191778.1;locus_tag=AD853_RS11620;product=5'/3'-nucleotidase SurE;protein_id=WP_011191778.1;transl_table=11 NZ_CPUY01000011.1 RefSeq gene 88160 89209 . - . ID=gene-AD853_RS11625;Name=truD;gbkey=Gene;gene=truD;gene_biotype=protein_coding;locus_tag=AD853_RS11625;old_locus_tag=ERS008462_02354 NZ_CPUY01000011.1 Protein Homology CDS 88160 89209 . - 0 ID=cds-WP_011191777.1;Parent=gene-AD853_RS11625;Dbxref=GenBank:WP_011191777.1;Name=WP_011191777.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;gene=truD;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012413490.1;locus_tag=AD853_RS11625;product=tRNA pseudouridine(13) synthase TruD;protein_id=WP_011191777.1;transl_table=11 NZ_CPUY01000011.1 RefSeq gene 89220 89708 . - . ID=gene-AD853_RS11630;Name=ispF;gbkey=Gene;gene=ispF;gene_biotype=protein_coding;locus_tag=AD853_RS11630;old_locus_tag=ERS008462_02355 NZ_CPUY01000011.1 Protein Homology CDS 89220 89708 . - 0 ID=cds-WP_002209392.1;Parent=gene-AD853_RS11630;Dbxref=GenBank:WP_002209392.1;Name=WP_002209392.1;Ontology_term=GO:0019288,GO:0008685;gbkey=CDS;gene=ispF;go_function=2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase activity|0008685||IEA;go_process=isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209392.1;locus_tag=AD853_RS11630;product=2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase;protein_id=WP_002209392.1;transl_table=11 NZ_CPUY01000011.1 RefSeq gene 89847 90572 . - . ID=gene-AD853_RS11635;Name=ispD;gbkey=Gene;gene=ispD;gene_biotype=protein_coding;locus_tag=AD853_RS11635;old_locus_tag=ERS008462_02356 NZ_CPUY01000011.1 Protein Homology CDS 89847 90572 . - 0 ID=cds-WP_038400374.1;Parent=gene-AD853_RS11635;Dbxref=GenBank:WP_038400374.1;Name=WP_038400374.1;Ontology_term=GO:0008299,GO:0019288,GO:0050518;gbkey=CDS;gene=ispD;go_function=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity|0050518||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA,isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105643.1;locus_tag=AD853_RS11635;product=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase;protein_id=WP_038400374.1;transl_table=11 NZ_CPUY01000011.1 RefSeq gene 90576 90896 . - . ID=gene-AD853_RS11640;Name=ftsB;gbkey=Gene;gene=ftsB;gene_biotype=protein_coding;locus_tag=AD853_RS11640;old_locus_tag=ERS008462_02357 NZ_CPUY01000011.1 Protein Homology CDS 90576 90896 . - 0 ID=cds-WP_002209390.1;Parent=gene-AD853_RS11640;Dbxref=GenBank:WP_002209390.1;Name=WP_002209390.1;gbkey=CDS;gene=ftsB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005181642.1;locus_tag=AD853_RS11640;product=cell division protein FtsB;protein_id=WP_002209390.1;transl_table=11 NZ_CPUY01000011.1 RefSeq gene 91209 91526 . - . ID=gene-AD853_RS11645;Name=AD853_RS11645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS11645;old_locus_tag=ERS008462_02358 NZ_CPUY01000011.1 Protein Homology CDS 91209 91526 . - 0 ID=cds-WP_002209389.1;Parent=gene-AD853_RS11645;Dbxref=GenBank:WP_002209389.1;Name=WP_002209389.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015683729.1;locus_tag=AD853_RS11645;product=DUF3561 family protein;protein_id=WP_002209389.1;transl_table=11 NZ_CPUY01000011.1 RefSeq gene 91717 92358 . - . ID=gene-AD853_RS11650;Name=cysC;gbkey=Gene;gene=cysC;gene_biotype=protein_coding;locus_tag=AD853_RS11650;old_locus_tag=ERS008462_02359 NZ_CPUY01000011.1 Protein Homology CDS 91717 92358 . - 0 ID=cds-WP_002209388.1;Parent=gene-AD853_RS11650;Dbxref=GenBank:WP_002209388.1;Name=WP_002209388.1;Ontology_term=GO:0000103,GO:0004020,GO:0005524;gbkey=CDS;gene=cysC;go_function=adenylylsulfate kinase activity|0004020||IEA,ATP binding|0005524||IEA;go_process=sulfate assimilation|0000103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105644.1;locus_tag=AD853_RS11650;product=adenylyl-sulfate kinase;protein_id=WP_002209388.1;transl_table=11 NZ_CPUY01000011.1 RefSeq gene 92360 93796 . - . ID=gene-AD853_RS11655;Name=cysN;gbkey=Gene;gene=cysN;gene_biotype=protein_coding;locus_tag=AD853_RS11655;old_locus_tag=ERS008462_02360 NZ_CPUY01000011.1 Protein Homology CDS 92360 93796 . - 0 ID=cds-WP_038823999.1;Parent=gene-AD853_RS11655;Dbxref=GenBank:WP_038823999.1;Name=WP_038823999.1;Ontology_term=GO:0006790,GO:0003924,GO:0005525;gbkey=CDS;gene=cysN;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=sulfur compound metabolic process|0006790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002228227.1;locus_tag=AD853_RS11655;product=sulfate adenylyltransferase subunit CysN;protein_id=WP_038823999.1;transl_table=11 NZ_CPUY01000011.1 RefSeq gene 93889 94797 . - . ID=gene-AD853_RS11660;Name=cysD;gbkey=Gene;gene=cysD;gene_biotype=protein_coding;locus_tag=AD853_RS11660;old_locus_tag=ERS008462_02361 NZ_CPUY01000011.1 Protein Homology CDS 93889 94797 . - 0 ID=cds-WP_038823998.1;Parent=gene-AD853_RS11660;Dbxref=GenBank:WP_038823998.1;Name=WP_038823998.1;Ontology_term=GO:0000103,GO:0004781;gbkey=CDS;gene=cysD;go_function=sulfate adenylyltransferase (ATP) activity|0004781||IEA;go_process=sulfate assimilation|0000103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130891.1;locus_tag=AD853_RS11660;product=sulfate adenylyltransferase subunit CysD;protein_id=WP_038823998.1;transl_table=11 NZ_CPUY01000011.1 RefSeq gene 94808 96226 . - . ID=gene-AD853_RS11665;Name=cysG;gbkey=Gene;gene=cysG;gene_biotype=protein_coding;locus_tag=AD853_RS11665;old_locus_tag=ERS008462_02362 NZ_CPUY01000011.1 Protein Homology CDS 94808 96226 . - 0 ID=cds-WP_038823997.1;Parent=gene-AD853_RS11665;Dbxref=GenBank:WP_038823997.1;Name=WP_038823997.1;Ontology_term=GO:0019354,GO:0004851,GO:0043115,GO:0051266,GO:0051287;gbkey=CDS;gene=cysG;go_function=uroporphyrin-III C-methyltransferase activity|0004851||IEA,precorrin-2 dehydrogenase activity|0043115||IEA,sirohydrochlorin ferrochelatase activity|0051266||IEA,NAD binding|0051287||IEA;go_process=siroheme biosynthetic process|0019354||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209385.1;locus_tag=AD853_RS11665;product=siroheme synthase CysG;protein_id=WP_038823997.1;transl_table=11 NZ_CPUY01000011.1 RefSeq gene 96528 96725 . - . ID=gene-AD853_RS11670;Name=AD853_RS11670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS11670 NZ_CPUY01000011.1 Protein Homology CDS 96528 96725 . - 0 ID=cds-WP_002222261.1;Parent=gene-AD853_RS11670;Dbxref=GenBank:WP_002222261.1;Name=WP_002222261.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002222261.1;locus_tag=AD853_RS11670;product=hypothetical protein;protein_id=WP_002222261.1;transl_table=11 NZ_CPUY01000011.1 RefSeq gene 96818 97018 . + . ID=gene-AD853_RS11675;Name=AD853_RS11675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS11675;old_locus_tag=ERS008462_02363 NZ_CPUY01000011.1 Protein Homology CDS 96818 97018 . + 0 ID=cds-WP_002209384.1;Parent=gene-AD853_RS11675;Dbxref=GenBank:WP_002209384.1;Name=WP_002209384.1;Ontology_term=GO:0003729;gbkey=CDS;go_function=mRNA binding|0003729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209384.1;locus_tag=AD853_RS11675;product=type II toxin-antitoxin system HicA family toxin;protein_id=WP_002209384.1;transl_table=11 NZ_CPUY01000011.1 RefSeq gene 97193 97600 . + . ID=gene-AD853_RS11680;Name=AD853_RS11680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS11680;old_locus_tag=ERS008462_02364 NZ_CPUY01000011.1 Protein Homology CDS 97193 97600 . + 0 ID=cds-WP_002209383.1;Parent=gene-AD853_RS11680;Dbxref=GenBank:WP_002209383.1;Name=WP_002209383.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209383.1;locus_tag=AD853_RS11680;product=type II toxin-antitoxin system HicB family antitoxin;protein_id=WP_002209383.1;transl_table=11 NZ_CPUY01000011.1 RefSeq gene 97593 97703 . - . ID=gene-AD853_RS21580;Name=AD853_RS21580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS21580 NZ_CPUY01000011.1 Protein Homology CDS 97593 97703 . - 0 ID=cds-WP_155406231.1;Parent=gene-AD853_RS21580;Dbxref=GenBank:WP_155406231.1;Name=WP_155406231.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002430096.1;locus_tag=AD853_RS21580;product=gluconate 5-dehydrogenase;protein_id=WP_155406231.1;transl_table=11 NZ_CPUY01000011.1 RefSeq gene 97843 98577 . - . ID=gene-AD853_RS11685;Name=AD853_RS11685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS11685;old_locus_tag=ERS008462_02365 NZ_CPUY01000011.1 Protein Homology CDS 97843 98577 . - 0 ID=cds-WP_011191774.1;Parent=gene-AD853_RS11685;Dbxref=GenBank:WP_011191774.1;Name=WP_011191774.1;Ontology_term=GO:0019379,GO:0003824,GO:0004604;gbkey=CDS;go_function=catalytic activity|0003824||IEA,phosphoadenylyl-sulfate reductase (thioredoxin) activity|0004604||IEA;go_process=sulfate assimilation%2C phosphoadenylyl sulfate reduction by phosphoadenylyl-sulfate reductase (thioredoxin)|0019379||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005163316.1;locus_tag=AD853_RS11685;product=phosphoadenylyl-sulfate reductase;protein_id=WP_011191774.1;transl_table=11 NZ_CPUY01000011.1 RefSeq gene 98574 100304 . - . ID=gene-AD853_RS11690;Name=cysI;gbkey=Gene;gene=cysI;gene_biotype=protein_coding;locus_tag=AD853_RS11690;old_locus_tag=ERS008462_02366 NZ_CPUY01000011.1 Protein Homology CDS 98574 100304 . - 0 ID=cds-WP_012105646.1;Parent=gene-AD853_RS11690;Dbxref=GenBank:WP_012105646.1;Name=WP_012105646.1;Ontology_term=GO:0000103,GO:0008652,GO:0004783,GO:0050661,GO:0051539,GO:0009337;gbkey=CDS;gene=cysI;go_component=sulfite reductase complex (NADPH)|0009337||IEA;go_function=sulfite reductase (NADPH) activity|0004783||IEA,NADP binding|0050661||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=sulfate assimilation|0000103||IEA,amino acid biosynthetic process|0008652||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209382.1;locus_tag=AD853_RS11690;product=assimilatory sulfite reductase (NADPH) hemoprotein subunit;protein_id=WP_012105646.1;transl_table=11 NZ_CPUY01000011.1 RefSeq gene 100304 102106 . - . ID=gene-AD853_RS11695;Name=cysJ;gbkey=Gene;gene=cysJ;gene_biotype=protein_coding;locus_tag=AD853_RS11695;old_locus_tag=ERS008462_02367 NZ_CPUY01000011.1 Protein Homology CDS 100304 102106 . - 0 ID=cds-WP_038825286.1;Parent=gene-AD853_RS11695;Dbxref=GenBank:WP_038825286.1;Name=WP_038825286.1;Ontology_term=GO:0000103,GO:0019344,GO:0004783,GO:0010181,GO:0050660;gbkey=CDS;gene=cysJ;go_function=sulfite reductase (NADPH) activity|0004783||IEA,FMN binding|0010181||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=sulfate assimilation|0000103||IEA,cysteine biosynthetic process|0019344||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209381.1;locus_tag=AD853_RS11695;product=NADPH-dependent assimilatory sulfite reductase flavoprotein subunit;protein_id=WP_038825286.1;transl_table=11 NZ_CPUY01000011.1 RefSeq gene 102499 102858 . + . ID=gene-AD853_RS11700;Name=queD;gbkey=Gene;gene=queD;gene_biotype=protein_coding;locus_tag=AD853_RS11700;old_locus_tag=ERS008462_02368 NZ_CPUY01000011.1 Protein Homology CDS 102499 102858 . + 0 ID=cds-WP_002209380.1;Parent=gene-AD853_RS11700;Dbxref=GenBank:WP_002209380.1;Name=WP_002209380.1;Ontology_term=GO:0008616,GO:0003824;gbkey=CDS;gene=queD;go_function=catalytic activity|0003824||IEA;go_process=tRNA queuosine(34) biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304561.1;locus_tag=AD853_RS11700;product=6-carboxytetrahydropterin synthase QueD;protein_id=WP_002209380.1;transl_table=11 NZ_CPUY01000011.1 RefSeq gene 103082 103753 . - . ID=gene-AD853_RS11705;Name=queE;gbkey=Gene;gene=queE;gene_biotype=protein_coding;locus_tag=AD853_RS11705;old_locus_tag=ERS008462_02369 NZ_CPUY01000011.1 Protein Homology CDS 103082 103753 . - 0 ID=cds-WP_002209379.1;Parent=gene-AD853_RS11705;Dbxref=GenBank:WP_002209379.1;Name=WP_002209379.1;Ontology_term=GO:0006400,GO:0051539,GO:1904047;gbkey=CDS;gene=queE;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228497.1;locus_tag=AD853_RS11705;product=7-carboxy-7-deazaguanine synthase QueE;protein_id=WP_002209379.1;transl_table=11 NZ_CPUY01000011.1 RefSeq gene 103857 104363 . - . ID=gene-AD853_RS11710;Name=sodC;gbkey=Gene;gene=sodC;gene_biotype=protein_coding;locus_tag=AD853_RS11710;old_locus_tag=ERS008462_02370 NZ_CPUY01000011.1 Protein Homology CDS 103857 104363 . - 0 ID=cds-WP_223847772.1;Parent=gene-AD853_RS11710;Dbxref=GenBank:WP_223847772.1;Name=WP_223847772.1;Ontology_term=GO:0004784;gbkey=CDS;gene=sodC;go_function=superoxide dismutase activity|0004784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304562.1;locus_tag=AD853_RS11710;product=superoxide dismutase family protein;protein_id=WP_223847772.1;transl_table=11 NZ_CPUY01000011.1 RefSeq gene 104798 106093 . - . ID=gene-AD853_RS11715;Name=eno;gbkey=Gene;gene=eno;gene_biotype=protein_coding;locus_tag=AD853_RS11715;old_locus_tag=ERS008462_02371 NZ_CPUY01000011.1 Protein Homology CDS 104798 106093 . - 0 ID=cds-WP_011191770.1;Parent=gene-AD853_RS11715;Dbxref=GenBank:WP_011191770.1;Name=WP_011191770.1;Ontology_term=GO:0006096,GO:0000287,GO:0004634,GO:0000015;gbkey=CDS;gene=eno;go_component=phosphopyruvate hydratase complex|0000015||IEA;go_function=magnesium ion binding|0000287||IEA,phosphopyruvate hydratase activity|0004634||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012005243.1;locus_tag=AD853_RS11715;product=phosphopyruvate hydratase;protein_id=WP_011191770.1;transl_table=11 NZ_CPUY01000011.1 RefSeq gene 106174 107811 . - . ID=gene-AD853_RS11720;Name=pyrG;gbkey=Gene;gene=pyrG;gene_biotype=protein_coding;locus_tag=AD853_RS11720;old_locus_tag=ERS008462_02372 NZ_CPUY01000011.1 Protein Homology CDS 106174 107811 . - 0 ID=cds-WP_002209376.1;Parent=gene-AD853_RS11720;Dbxref=GenBank:WP_002209376.1;Name=WP_002209376.1;Ontology_term=GO:0006221,GO:0003883;gbkey=CDS;gene=pyrG;go_function=CTP synthase activity|0003883||IEA;go_process=pyrimidine nucleotide biosynthetic process|0006221||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130912.1;locus_tag=AD853_RS11720;product=glutamine hydrolyzing CTP synthase;protein_id=WP_002209376.1;transl_table=11 NZ_CPUY01000011.1 RefSeq gene 108023 108865 . - . ID=gene-AD853_RS11725;Name=mazG;gbkey=Gene;gene=mazG;gene_biotype=protein_coding;locus_tag=AD853_RS11725;old_locus_tag=ERS008462_02373 NZ_CPUY01000011.1 Protein Homology CDS 108023 108865 . - 0 ID=cds-WP_038824869.1;Parent=gene-AD853_RS11725;Dbxref=GenBank:WP_038824869.1;Name=WP_038824869.1;gbkey=CDS;gene=mazG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019080461.1;locus_tag=AD853_RS11725;product=nucleoside triphosphate pyrophosphohydrolase;protein_id=WP_038824869.1;transl_table=11 NZ_CPUY01000011.1 RefSeq gene 109046 111280 . - . ID=gene-AD853_RS11735;Name=relA;gbkey=Gene;gene=relA;gene_biotype=protein_coding;locus_tag=AD853_RS11735;old_locus_tag=ERS008462_02374 NZ_CPUY01000011.1 Protein Homology CDS 109046 111280 . - 0 ID=cds-WP_002209373.1;Parent=gene-AD853_RS11735;Dbxref=GenBank:WP_002209373.1;Name=WP_002209373.1;Ontology_term=GO:0015969;gbkey=CDS;gene=relA;go_process=guanosine tetraphosphate metabolic process|0015969||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209373.1;locus_tag=AD853_RS11735;product=GTP diphosphokinase;protein_id=WP_002209373.1;transl_table=11 NZ_CPUY01000011.1 RefSeq pseudogene 111290 111406 . - . ID=gene-AD853_RS20655;Name=AD853_RS20655;end_range=111406,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD853_RS20655;partial=true;pseudo=true NZ_CPUY01000011.1 Protein Homology CDS 111290 111406 . - 0 ID=cds-AD853_RS20655;Parent=gene-AD853_RS20655;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=111406,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013649327.1;locus_tag=AD853_RS20655;partial=true;product=23S rRNA methyltransferase;pseudo=true;transl_table=11 NZ_CPUY01000011.1 RefSeq gene 111431 111613 . - . ID=gene-AD853_RS20660;Name=AD853_RS20660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS20660 NZ_CPUY01000011.1 Protein Homology CDS 111431 111613 . - 0 ID=cds-WP_071819072.1;Parent=gene-AD853_RS20660;Dbxref=GenBank:WP_071819072.1;Name=WP_071819072.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002216873.1;locus_tag=AD853_RS20660;product=hypothetical protein;protein_id=WP_071819072.1;transl_table=11 NZ_CPUY01000011.1 RefSeq gene 111724 114516 . + . ID=gene-AD853_RS11740;Name=barA;gbkey=Gene;gene=barA;gene_biotype=protein_coding;locus_tag=AD853_RS11740;old_locus_tag=ERS008462_02375 NZ_CPUY01000011.1 Protein Homology CDS 111724 114516 . + 0 ID=cds-WP_050124603.1;Parent=gene-AD853_RS11740;Dbxref=GenBank:WP_050124603.1;Name=WP_050124603.1;Ontology_term=GO:0000160,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=barA;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002264454.1;locus_tag=AD853_RS11740;product=two-component sensor histidine kinase BarA;protein_id=WP_050124603.1;transl_table=11 NZ_CPUY01000011.1 RefSeq gene 114675 116120 . - . ID=gene-AD853_RS11745;Name=degP;gbkey=Gene;gene=degP;gene_biotype=protein_coding;locus_tag=AD853_RS11745;old_locus_tag=ERS008462_02376 NZ_CPUY01000011.1 Protein Homology CDS 114675 116120 . - 0 ID=cds-WP_012105650.1;Parent=gene-AD853_RS11745;Dbxref=GenBank:WP_012105650.1;Name=WP_012105650.1;gbkey=CDS;gene=degP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209370.1;locus_tag=AD853_RS11745;product=serine endoprotease DegP;protein_id=WP_012105650.1;transl_table=11 NZ_CPUY01000011.1 RefSeq gene 116318 117838 . - . ID=gene-AD853_RS11750;Name=dgt;gbkey=Gene;gene=dgt;gene_biotype=protein_coding;locus_tag=AD853_RS11750;old_locus_tag=ERS008462_02377 NZ_CPUY01000011.1 Protein Homology CDS 116318 117838 . - 0 ID=cds-WP_011191765.1;Parent=gene-AD853_RS11750;Dbxref=GenBank:WP_011191765.1;Name=WP_011191765.1;Ontology_term=GO:0006203,GO:0000287,GO:0008832;gbkey=CDS;gene=dgt;go_function=magnesium ion binding|0000287||IEA,dGTPase activity|0008832||IEA;go_process=dGTP catabolic process|0006203||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304564.1;locus_tag=AD853_RS11750;product=dGTPase;protein_id=WP_011191765.1;transl_table=11 NZ_CPUY01000011.1 RefSeq gene 118115 118816 . + . ID=gene-AD853_RS11755;Name=mtnN;gbkey=Gene;gene=mtnN;gene_biotype=protein_coding;locus_tag=AD853_RS11755;old_locus_tag=ERS008462_02378 NZ_CPUY01000011.1 Protein Homology CDS 118115 118816 . + 0 ID=cds-WP_011191764.1;Parent=gene-AD853_RS11755;Dbxref=GenBank:WP_011191764.1;Name=WP_011191764.1;Ontology_term=GO:0009164,GO:0019509,GO:0008782,GO:0008930;gbkey=CDS;gene=mtnN;go_function=adenosylhomocysteine nucleosidase activity|0008782||IEA,methylthioadenosine nucleosidase activity|0008930||IEA;go_process=nucleoside catabolic process|0009164||IEA,L-methionine salvage from methylthioadenosine|0019509||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004706257.1;locus_tag=AD853_RS11755;product=5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase;protein_id=WP_011191764.1;transl_table=11 NZ_CPUY01000011.1 RefSeq gene 118816 119658 . + . ID=gene-AD853_RS11760;Name=btuF;gbkey=Gene;gene=btuF;gene_biotype=protein_coding;locus_tag=AD853_RS11760;old_locus_tag=ERS008462_02379 NZ_CPUY01000011.1 Protein Homology CDS 118816 119658 . + 0 ID=cds-WP_011191763.1;Parent=gene-AD853_RS11760;Dbxref=GenBank:WP_011191763.1;Name=WP_011191763.1;Ontology_term=GO:0005524,GO:0031419;gbkey=CDS;gene=btuF;go_function=ATP binding|0005524||IEA,cobalamin binding|0031419||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011191763.1;locus_tag=AD853_RS11760;product=vitamin B12 ABC transporter substrate-binding protein BtuF;protein_id=WP_011191763.1;transl_table=11 NZ_CPUY01000011.1 RefSeq gene 119658 120272 . + . ID=gene-AD853_RS11765;Name=AD853_RS11765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS11765;old_locus_tag=ERS008462_02380 NZ_CPUY01000011.1 Protein Homology CDS 119658 120272 . + 0 ID=cds-WP_002209366.1;Parent=gene-AD853_RS11765;Dbxref=GenBank:WP_002209366.1;Name=WP_002209366.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016256888.1;locus_tag=AD853_RS11765;product=TRIC cation channel family protein;protein_id=WP_002209366.1;transl_table=11 NZ_CPUY01000011.1 RefSeq gene 120523 120867 . - . ID=gene-AD853_RS11770;Name=erpA;gbkey=Gene;gene=erpA;gene_biotype=protein_coding;locus_tag=AD853_RS11770;old_locus_tag=ERS008462_02381 NZ_CPUY01000011.1 Protein Homology CDS 120523 120867 . - 0 ID=cds-WP_002209365.1;Parent=gene-AD853_RS11770;Dbxref=GenBank:WP_002209365.1;Name=WP_002209365.1;Ontology_term=GO:0016226,GO:0051536;gbkey=CDS;gene=erpA;go_function=iron-sulfur cluster binding|0051536||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001295564.1;locus_tag=AD853_RS11770;product=iron-sulfur cluster insertion protein ErpA;protein_id=WP_002209365.1;transl_table=11 NZ_CPUY01000011.1 RefSeq gene 121003 122439 . - . ID=gene-AD853_RS11775;Name=clcA;gbkey=Gene;gene=clcA;gene_biotype=protein_coding;locus_tag=AD853_RS11775;old_locus_tag=ERS008462_02382 NZ_CPUY01000011.1 Protein Homology CDS 121003 122439 . - 0 ID=cds-WP_002209364.1;Parent=gene-AD853_RS11775;Dbxref=GenBank:WP_002209364.1;Name=WP_002209364.1;Ontology_term=GO:0006821,GO:0055085,GO:0005247,GO:0005886;gbkey=CDS;gene=clcA;go_component=plasma membrane|0005886||IEA;go_function=voltage-gated chloride channel activity|0005247||IEA;go_process=chloride transport|0006821||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209364.1;locus_tag=AD853_RS11775;product=H(+)/Cl(-) exchange transporter ClcA;protein_id=WP_002209364.1;transl_table=11 NZ_CPUY01000011.1 RefSeq gene 122763 124043 . + . ID=gene-AD853_RS11780;Name=hemL;gbkey=Gene;gene=hemL;gene_biotype=protein_coding;locus_tag=AD853_RS11780;old_locus_tag=ERS008462_02383 NZ_CPUY01000011.1 Protein Homology CDS 122763 124043 . + 0 ID=cds-WP_038825290.1;Parent=gene-AD853_RS11780;Dbxref=GenBank:WP_038825290.1;Name=WP_038825290.1;Ontology_term=GO:0033014,GO:0042286;gbkey=CDS;gene=hemL;go_function=glutamate-1-semialdehyde 2%2C1-aminomutase activity|0042286||IEA;go_process=tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020233394.1;locus_tag=AD853_RS11780;product=glutamate-1-semialdehyde 2%2C1-aminomutase;protein_id=WP_038825290.1;transl_table=11 NZ_CPUY01000011.1 RefSeq gene 124417 126414 . - . ID=gene-AD853_RS11785;Name=fhuB;gbkey=Gene;gene=fhuB;gene_biotype=protein_coding;locus_tag=AD853_RS11785;old_locus_tag=ERS008462_02384 NZ_CPUY01000011.1 Protein Homology CDS 124417 126414 . - 0 ID=cds-WP_002209361.1;Parent=gene-AD853_RS11785;Dbxref=GenBank:WP_002209361.1;Name=WP_002209361.1;gbkey=CDS;gene=fhuB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209361.1;locus_tag=AD853_RS11785;product=Fe(3+)-hydroxamate ABC transporter permease FhuB;protein_id=WP_002209361.1;transl_table=11 NZ_CPUY01000011.1 RefSeq gene 126411 127322 . - . ID=gene-AD853_RS11790;Name=fhuD;gbkey=Gene;gene=fhuD;gene_biotype=protein_coding;locus_tag=AD853_RS11790;old_locus_tag=ERS008462_02385 NZ_CPUY01000011.1 Protein Homology CDS 126411 127322 . - 0 ID=cds-WP_002209360.1;Parent=gene-AD853_RS11790;Dbxref=GenBank:WP_002209360.1;Name=WP_002209360.1;gbkey=CDS;gene=fhuD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002430132.1;locus_tag=AD853_RS11790;product=Fe(3+)-hydroxamate ABC transporter substrate-binding protein FhuD;protein_id=WP_002209360.1;transl_table=11 NZ_CPUY01000011.1 RefSeq gene 127301 127543 . + . ID=gene-AD853_RS22195;Name=AD853_RS22195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS22195 NZ_CPUY01000011.1 Protein Homology CDS 127301 127543 . + 0 ID=cds-WP_002366246.1;Parent=gene-AD853_RS22195;Dbxref=GenBank:WP_002366246.1;Name=WP_002366246.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002366246.1;locus_tag=AD853_RS22195;product=hypothetical protein;protein_id=WP_002366246.1;transl_table=11 NZ_CPUY01000011.1 RefSeq gene 127499 128293 . - . ID=gene-AD853_RS11800;Name=fhuC;gbkey=Gene;gene=fhuC;gene_biotype=protein_coding;locus_tag=AD853_RS11800;old_locus_tag=ERS008462_02386 NZ_CPUY01000011.1 Protein Homology CDS 127499 128293 . - 0 ID=cds-WP_002209359.1;Parent=gene-AD853_RS11800;Dbxref=GenBank:WP_002209359.1;Name=WP_002209359.1;Ontology_term=GO:0005524;gbkey=CDS;gene=fhuC;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016678491.1;locus_tag=AD853_RS11800;product=Fe3+-hydroxamate ABC transporter ATP-binding protein FhuC;protein_id=WP_002209359.1;transl_table=11 NZ_CPUY01000011.1 RefSeq gene 128615 131095 . - . ID=gene-AD853_RS11805;Name=mrcB;gbkey=Gene;gene=mrcB;gene_biotype=protein_coding;locus_tag=AD853_RS11805;old_locus_tag=ERS008462_02387 NZ_CPUY01000011.1 Protein Homology CDS 128615 131095 . - 0 ID=cds-WP_038824077.1;Parent=gene-AD853_RS11805;Dbxref=GenBank:WP_038824077.1;Name=WP_038824077.1;Ontology_term=GO:0009252,GO:0046677,GO:0008658,GO:0008955,GO:0009274;gbkey=CDS;gene=mrcB;go_component=peptidoglycan-based cell wall|0009274||IEA;go_function=penicillin binding|0008658||IEA,peptidoglycan glycosyltransferase activity|0008955||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,response to antibiotic|0046677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002228223.1;locus_tag=AD853_RS11805;product=bifunctional glycosyl transferase/transpeptidase;protein_id=WP_038824077.1;transl_table=11 NZ_CPUY01000011.1 RefSeq gene 131204 133765 . - . ID=gene-AD853_RS11810;Name=hrpB;gbkey=Gene;gene=hrpB;gene_biotype=protein_coding;locus_tag=AD853_RS11810;old_locus_tag=ERS008462_02388 NZ_CPUY01000011.1 Protein Homology CDS 131204 133765 . - 0 ID=cds-WP_038824078.1;Parent=gene-AD853_RS11810;Dbxref=GenBank:WP_038824078.1;Name=WP_038824078.1;Ontology_term=GO:0004386,GO:0005524;gbkey=CDS;gene=hrpB;go_function=helicase activity|0004386||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002222096.1;locus_tag=AD853_RS11810;product=ATP-dependent helicase HrpB;protein_id=WP_038824078.1;transl_table=11 NZ_CPUY01000011.1 RefSeq gene 133806 134381 . + . ID=gene-AD853_RS11815;Name=thpR;gbkey=Gene;gene=thpR;gene_biotype=protein_coding;locus_tag=AD853_RS11815;old_locus_tag=ERS008462_02389 NZ_CPUY01000011.1 Protein Homology CDS 133806 134381 . + 0 ID=cds-WP_038824080.1;Parent=gene-AD853_RS11815;Dbxref=GenBank:WP_038824080.1;Name=WP_038824080.1;Ontology_term=GO:0004113,GO:0008664;gbkey=CDS;gene=thpR;go_function=2'%2C3'-cyclic-nucleotide 3'-phosphodiesterase activity|0004113||IEA,RNA 2'%2C3'-cyclic 3'-phosphodiesterase activity|0008664||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011191757.1;locus_tag=AD853_RS11815;product=RNA 2'%2C3'-cyclic phosphodiesterase;protein_id=WP_038824080.1;transl_table=11 NZ_CPUY01000011.1 RefSeq gene 134515 135252 . + . ID=gene-AD853_RS11820;Name=sfsA;gbkey=Gene;gene=sfsA;gene_biotype=protein_coding;locus_tag=AD853_RS11820;old_locus_tag=ERS008462_02390 NZ_CPUY01000011.1 Protein Homology CDS 134515 135252 . + 0 ID=cds-WP_002228221.1;Parent=gene-AD853_RS11820;Dbxref=GenBank:WP_002228221.1;Name=WP_002228221.1;Ontology_term=GO:0003677;gbkey=CDS;gene=sfsA;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_032466625.1;locus_tag=AD853_RS11820;product=DNA/RNA nuclease SfsA;protein_id=WP_002228221.1;transl_table=11 NZ_CPUY01000011.1 RefSeq gene 135422 135877 . + . ID=gene-AD853_RS11825;Name=dksA;gbkey=Gene;gene=dksA;gene_biotype=protein_coding;locus_tag=AD853_RS11825;old_locus_tag=ERS008462_02391 NZ_CPUY01000011.1 Protein Homology CDS 135422 135877 . + 0 ID=cds-WP_002209354.1;Parent=gene-AD853_RS11825;Dbxref=GenBank:WP_002209354.1;Name=WP_002209354.1;gbkey=CDS;gene=dksA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209354.1;locus_tag=AD853_RS11825;product=RNA polymerase-binding protein DksA;protein_id=WP_002209354.1;transl_table=11 NZ_CPUY01000011.1 RefSeq gene 136157 137152 . + . ID=gene-AD853_RS11830;Name=gluQRS;gbkey=Gene;gene=gluQRS;gene_biotype=protein_coding;locus_tag=AD853_RS11830;old_locus_tag=ERS008462_02392 NZ_CPUY01000011.1 Protein Homology CDS 136157 137152 . + 0 ID=cds-WP_038831662.1;Parent=gene-AD853_RS11830;Dbxref=GenBank:WP_038831662.1;Name=WP_038831662.1;Ontology_term=GO:0006400,GO:0043039,GO:0000166,GO:0004812,GO:0005524;gbkey=CDS;gene=gluQRS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,ATP binding|0005524||IEA;go_process=tRNA modification|0006400||IEA,tRNA aminoacylation|0043039||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002231130.1;locus_tag=AD853_RS11830;product=tRNA glutamyl-Q(34) synthetase GluQRS;protein_id=WP_038831662.1;transl_table=11 NZ_CPUY01000011.1 RefSeq gene 137208 138716 . + . ID=gene-AD853_RS11835;Name=pcnB;gbkey=Gene;gene=pcnB;gene_biotype=protein_coding;locus_tag=AD853_RS11835;old_locus_tag=ERS008462_02393 NZ_CPUY01000011.1 Protein Homology CDS 137208 138716 . + 0 ID=cds-WP_002228219.1;Parent=gene-AD853_RS11835;Dbxref=GenBank:WP_002228219.1;Name=WP_002228219.1;Ontology_term=GO:0003723,GO:1990817;gbkey=CDS;gene=pcnB;go_function=RNA binding|0003723||IEA,poly(A) RNA polymerase activity|1990817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414685.4;locus_tag=AD853_RS11835;product=polynucleotide adenylyltransferase PcnB;protein_id=WP_002228219.1;transl_table=11 NZ_CPUY01000011.1 RefSeq gene 138724 139203 . + . ID=gene-AD853_RS11840;Name=folK;gbkey=Gene;gene=folK;gene_biotype=protein_coding;locus_tag=AD853_RS11840;old_locus_tag=ERS008462_02394 NZ_CPUY01000011.1 Protein Homology CDS 138724 139203 . + 0 ID=cds-WP_002209351.1;Parent=gene-AD853_RS11840;Dbxref=GenBank:WP_002209351.1;Name=WP_002209351.1;Ontology_term=GO:0009396,GO:0003848;gbkey=CDS;gene=folK;go_function=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity|0003848||IEA;go_process=folic acid-containing compound biosynthetic process|0009396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209351.1;locus_tag=AD853_RS11840;product=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase;protein_id=WP_002209351.1;transl_table=11 NZ_CPUY01000011.1 RefSeq gene 139473 140270 . + . ID=gene-AD853_RS11845;Name=panB;gbkey=Gene;gene=panB;gene_biotype=protein_coding;locus_tag=AD853_RS11845;old_locus_tag=ERS008462_02395 NZ_CPUY01000011.1 Protein Homology CDS 139473 140270 . + 0 ID=cds-WP_038400391.1;Parent=gene-AD853_RS11845;Dbxref=GenBank:WP_038400391.1;Name=WP_038400391.1;Ontology_term=GO:0015940,GO:0003864;gbkey=CDS;gene=panB;go_function=3-methyl-2-oxobutanoate hydroxymethyltransferase activity|0003864||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209349.1;locus_tag=AD853_RS11845;product=3-methyl-2-oxobutanoate hydroxymethyltransferase;protein_id=WP_038400391.1;transl_table=11 NZ_CPUY01000011.1 RefSeq gene 140358 141212 . + . ID=gene-AD853_RS11850;Name=panC;gbkey=Gene;gene=panC;gene_biotype=protein_coding;locus_tag=AD853_RS11850;old_locus_tag=ERS008462_02396 NZ_CPUY01000011.1 Protein Homology CDS 140358 141212 . + 0 ID=cds-WP_038826671.1;Parent=gene-AD853_RS11850;Dbxref=GenBank:WP_038826671.1;Name=WP_038826671.1;Ontology_term=GO:0015940,GO:0004592;gbkey=CDS;gene=panC;go_function=pantoate-beta-alanine ligase activity|0004592||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011191752.1;locus_tag=AD853_RS11850;product=pantoate--beta-alanine ligase;protein_id=WP_038826671.1;transl_table=11 NZ_CPUY01000011.1 RefSeq gene 141623 142003 . + . ID=gene-AD853_RS11855;Name=panD;gbkey=Gene;gene=panD;gene_biotype=protein_coding;locus_tag=AD853_RS11855;old_locus_tag=ERS008462_02397 NZ_CPUY01000011.1 Protein Homology CDS 141623 142003 . + 0 ID=cds-WP_011191751.1;Parent=gene-AD853_RS11855;Dbxref=GenBank:WP_011191751.1;Name=WP_011191751.1;Ontology_term=GO:0006523,GO:0004068;gbkey=CDS;gene=panD;go_function=aspartate 1-decarboxylase activity|0004068||IEA;go_process=alanine biosynthetic process|0006523||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015673742.1;locus_tag=AD853_RS11855;product=aspartate 1-decarboxylase;protein_id=WP_011191751.1;transl_table=11 NZ_CPUY01000011.1 RefSeq gene 142152 143465 . - . ID=gene-AD853_RS11860;Name=AD853_RS11860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS11860;old_locus_tag=ERS008462_02398 NZ_CPUY01000011.1 Protein Homology CDS 142152 143465 . - 0 ID=cds-WP_038824082.1;Parent=gene-AD853_RS11860;Dbxref=GenBank:WP_038824082.1;Name=WP_038824082.1;Ontology_term=GO:0005975,GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002216851.1;locus_tag=AD853_RS11860;product=polysaccharide deacetylase family protein;protein_id=WP_038824082.1;transl_table=11 NZ_CPUY01000011.1 RefSeq gene 143667 144437 . - . ID=gene-AD853_RS11865;Name=AD853_RS11865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS11865;old_locus_tag=ERS008462_02399 NZ_CPUY01000011.1 Protein Homology CDS 143667 144437 . - 0 ID=cds-WP_002209344.1;Parent=gene-AD853_RS11865;Dbxref=GenBank:WP_002209344.1;Name=WP_002209344.1;Ontology_term=GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209344.1;locus_tag=AD853_RS11865;product=ABC transporter permease;protein_id=WP_002209344.1;transl_table=11 NZ_CPUY01000011.1 RefSeq gene 144434 145360 . - . ID=gene-AD853_RS11870;Name=AD853_RS11870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS11870;old_locus_tag=ERS008462_02400 NZ_CPUY01000011.1 Protein Homology CDS 144434 145360 . - 0 ID=cds-WP_011191749.1;Parent=gene-AD853_RS11870;Dbxref=GenBank:WP_011191749.1;Name=WP_011191749.1;Ontology_term=GO:0005524,GO:0016887,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019080482.1;locus_tag=AD853_RS11870;product=ABC transporter ATP-binding protein;protein_id=WP_011191749.1;transl_table=11 NZ_CPUY01000011.1 RefSeq gene 145596 146258 . + . ID=gene-AD853_RS11875;Name=can;gbkey=Gene;gene=can;gene_biotype=protein_coding;locus_tag=AD853_RS11875;old_locus_tag=ERS008462_02401 NZ_CPUY01000011.1 Protein Homology CDS 145596 146258 . + 0 ID=cds-WP_038824083.1;Parent=gene-AD853_RS11875;Dbxref=GenBank:WP_038824083.1;Name=WP_038824083.1;Ontology_term=GO:0015976,GO:0004089,GO:0008270;gbkey=CDS;gene=can;go_function=carbonate dehydratase activity|0004089||IEA,zinc ion binding|0008270||IEA;go_process=carbon utilization|0015976||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209342.1;locus_tag=AD853_RS11875;product=carbonate dehydratase;protein_id=WP_038824083.1;transl_table=11 NZ_CPUY01000011.1 RefSeq gene 146547 147083 . - . ID=gene-AD853_RS11880;Name=hpt;gbkey=Gene;gene=hpt;gene_biotype=protein_coding;locus_tag=AD853_RS11880;old_locus_tag=ERS008462_02402 NZ_CPUY01000011.1 Protein Homology CDS 146547 147083 . - 0 ID=cds-WP_011191748.1;Parent=gene-AD853_RS11880;Dbxref=GenBank:WP_011191748.1;Name=WP_011191748.1;Ontology_term=GO:0006166;gbkey=CDS;gene=hpt;go_process=purine ribonucleoside salvage|0006166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308156.2;locus_tag=AD853_RS11880;product=hypoxanthine phosphoribosyltransferase;protein_id=WP_011191748.1;transl_table=11 NZ_CPUY01000011.1 RefSeq gene 147303 148904 . - . ID=gene-AD853_RS11885;Name=cueO;gbkey=Gene;gene=cueO;gene_biotype=protein_coding;locus_tag=AD853_RS11885;old_locus_tag=ERS008462_02403 NZ_CPUY01000011.1 Protein Homology CDS 147303 148904 . - 0 ID=cds-WP_038824084.1;Parent=gene-AD853_RS11885;Dbxref=GenBank:WP_038824084.1;Name=WP_038824084.1;Ontology_term=GO:0005507,GO:0016491;gbkey=CDS;gene=cueO;go_function=copper ion binding|0005507||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209340.1;locus_tag=AD853_RS11885;product=multicopper oxidase CueO;protein_id=WP_038824084.1;transl_table=11 NZ_CPUY01000011.1 RefSeq gene 149208 149555 . + . ID=gene-AD853_RS11890;Name=AD853_RS11890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS11890;old_locus_tag=ERS008462_02404 NZ_CPUY01000011.1 Protein Homology CDS 149208 149555 . + 0 ID=cds-WP_002228215.1;Parent=gene-AD853_RS11890;Dbxref=GenBank:WP_002228215.1;Name=WP_002228215.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002228215.1;locus_tag=AD853_RS11890;product=YacC family pilotin-like protein;protein_id=WP_002228215.1;transl_table=11 NZ_CPUY01000011.1 RefSeq pseudogene 149673 150500 . + . ID=gene-AD853_RS22665;Name=speE;end_range=150500,.;gbkey=Gene;gene=speE;gene_biotype=pseudogene;locus_tag=AD853_RS22665;old_locus_tag=ERS008462_02405;partial=true;pseudo=true NZ_CPUY01000011.1 Protein Homology CDS 149673 150500 . + 0 ID=cds-AD853_RS22665;Parent=gene-AD853_RS22665;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=150500,.;gbkey=CDS;gene=speE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011191746.1;locus_tag=AD853_RS22665;partial=true;product=polyamine aminopropyltransferase;pseudo=true;transl_table=11 NZ_CPUY01000011.1 RefSeq pseudogene 150541 151806 . + . ID=gene-AD853_RS22670;Name=AD853_RS22670;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD853_RS22670;old_locus_tag=ERS008462_02406;partial=true;pseudo=true;start_range=.,150541 NZ_CPUY01000011.1 Protein Homology CDS 150541 151806 . + 0 ID=cds-AD853_RS22670;Parent=gene-AD853_RS22670;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001138014.1;locus_tag=AD853_RS22670;partial=true;product=Tn3-like element TnAs1 family transposase;pseudo=true;start_range=.,150541;transl_table=11 NZ_CPUY01000011.1 RefSeq gene 151985 152779 . + . ID=gene-AD853_RS11905;Name=speD;gbkey=Gene;gene=speD;gene_biotype=protein_coding;locus_tag=AD853_RS11905;old_locus_tag=ERS008462_02407 NZ_CPUY01000011.1 Protein Homology CDS 151985 152779 . + 0 ID=cds-WP_002209337.1;Parent=gene-AD853_RS11905;Dbxref=GenBank:WP_002209337.1;Name=WP_002209337.1;Ontology_term=GO:0008295,GO:0004014;gbkey=CDS;gene=speD;go_function=adenosylmethionine decarboxylase activity|0004014||IEA;go_process=spermidine biosynthetic process|0008295||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012146704.1;locus_tag=AD853_RS11905;product=adenosylmethionine decarboxylase;protein_id=WP_002209337.1;transl_table=11 NZ_CPUY01000011.1 RefSeq pseudogene 152983 153087 . + . ID=gene-AD853_RS22675;Name=AD853_RS22675;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD853_RS22675;partial=true;pseudo=true;start_range=.,152983 NZ_CPUY01000011.1 Protein Homology CDS 152983 153087 . + 0 ID=cds-AD853_RS22675;Parent=gene-AD853_RS22675;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_075985013.1;locus_tag=AD853_RS22675;partial=true;product=IS1 family transposase;pseudo=true;start_range=.,152983;transl_table=11 NZ_CPUY01000011.1 RefSeq gene 153196 154083 . + . ID=gene-AD853_RS11910;Name=yddG;gbkey=Gene;gene=yddG;gene_biotype=protein_coding;locus_tag=AD853_RS11910;old_locus_tag=ERS008462_02408 NZ_CPUY01000011.1 Protein Homology CDS 153196 154083 . + 0 ID=cds-WP_011191744.1;Parent=gene-AD853_RS11910;Dbxref=GenBank:WP_011191744.1;Name=WP_011191744.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yddG;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209335.1;locus_tag=AD853_RS11910;product=aromatic amino acid DMT transporter YddG;protein_id=WP_011191744.1;transl_table=11 NZ_CPUY01000011.1 RefSeq gene 154208 154567 . - . ID=gene-AD853_RS11915;Name=yacL;gbkey=Gene;gene=yacL;gene_biotype=protein_coding;locus_tag=AD853_RS11915;old_locus_tag=ERS008462_02409 NZ_CPUY01000011.1 Protein Homology CDS 154208 154567 . - 0 ID=cds-WP_002209334.1;Parent=gene-AD853_RS11915;Dbxref=GenBank:WP_002209334.1;Name=WP_002209334.1;gbkey=CDS;gene=yacL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209334.1;locus_tag=AD853_RS11915;product=protein YacL;protein_id=WP_002209334.1;transl_table=11 NZ_CPUY01000011.1 RefSeq gene 154885 157482 . - . ID=gene-AD853_RS11920;Name=acnB;gbkey=Gene;gene=acnB;gene_biotype=protein_coding;locus_tag=AD853_RS11920;old_locus_tag=ERS008462_02410 NZ_CPUY01000011.1 Protein Homology CDS 154885 157482 . - 0 ID=cds-WP_002209333.1;Parent=gene-AD853_RS11920;Dbxref=GenBank:WP_002209333.1;Name=WP_002209333.1;Ontology_term=GO:0006099,GO:0003994,GO:0051539,GO:0005829;gbkey=CDS;gene=acnB;go_component=cytosol|0005829||IEA;go_function=aconitate hydratase activity|0003994||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019080489.1;locus_tag=AD853_RS11920;product=bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase;protein_id=WP_002209333.1;transl_table=11 ##sequence-region NZ_CPUY01000012.1 1 142971 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=633 NZ_CPUY01000012.1 RefSeq region 1 142971 . + . ID=NZ_CPUY01000012.1:1..142971;Dbxref=taxon:633;collection-date=1900/2008;country=South Africa;gbkey=Src;genome=genomic;isolation-source=not known;mol_type=genomic DNA;nat-host=pig;serovar=O:3;strain=IP32544 NZ_CPUY01000012.1 RefSeq gene 2 86 . - . ID=gene-AD853_RS11925;Name=AD853_RS11925;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD853_RS11925;old_locus_tag=ERS008462_02411 NZ_CPUY01000012.1 tRNAscan-SE tRNA 2 86 . - . ID=rna-AD853_RS11925;Parent=gene-AD853_RS11925;anticodon=(pos:complement(50..52));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD853_RS11925;product=tRNA-Tyr NZ_CPUY01000012.1 tRNAscan-SE exon 2 86 . - . ID=exon-AD853_RS11925-1;Parent=rna-AD853_RS11925;anticodon=(pos:complement(50..52));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD853_RS11925;product=tRNA-Tyr NZ_CPUY01000012.1 RefSeq gene 105 180 . - . ID=gene-AD853_RS11930;Name=AD853_RS11930;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD853_RS11930;old_locus_tag=ERS008462_02412 NZ_CPUY01000012.1 tRNAscan-SE tRNA 105 180 . - . ID=rna-AD853_RS11930;Parent=gene-AD853_RS11930;anticodon=(pos:complement(145..147));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD853_RS11930;product=tRNA-Thr NZ_CPUY01000012.1 tRNAscan-SE exon 105 180 . - . ID=exon-AD853_RS11930-1;Parent=rna-AD853_RS11930;anticodon=(pos:complement(145..147));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD853_RS11930;product=tRNA-Thr NZ_CPUY01000012.1 RefSeq gene 669 1127 . + . ID=gene-AD853_RS11935;Name=AD853_RS11935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS11935;old_locus_tag=ERS008462_02413 NZ_CPUY01000012.1 Protein Homology CDS 669 1127 . + 0 ID=cds-WP_190947807.1;Parent=gene-AD853_RS11935;Dbxref=GenBank:WP_190947807.1;Name=WP_190947807.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002355327.1;locus_tag=AD853_RS11935;product=GNAT family N-acetyltransferase;protein_id=WP_190947807.1;transl_table=11 NZ_CPUY01000012.1 RefSeq gene 1338 2288 . + . ID=gene-AD853_RS11940;Name=coaA;gbkey=Gene;gene=coaA;gene_biotype=protein_coding;locus_tag=AD853_RS11940;old_locus_tag=ERS008462_02414 NZ_CPUY01000012.1 Protein Homology CDS 1338 2288 . + 0 ID=cds-WP_002212290.1;Parent=gene-AD853_RS11940;Dbxref=GenBank:WP_002212290.1;Name=WP_002212290.1;Ontology_term=GO:0015937,GO:0004594;gbkey=CDS;gene=coaA;go_function=pantothenate kinase activity|0004594||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012004738.1;locus_tag=AD853_RS11940;product=type I pantothenate kinase;protein_id=WP_002212290.1;transl_table=11 NZ_CPUY01000012.1 RefSeq gene 2323 3282 . - . ID=gene-AD853_RS11945;Name=birA;gbkey=Gene;gene=birA;gene_biotype=protein_coding;locus_tag=AD853_RS11945;old_locus_tag=ERS008462_02415 NZ_CPUY01000012.1 Protein Homology CDS 2323 3282 . - 0 ID=cds-WP_002212289.1;Parent=gene-AD853_RS11945;Dbxref=GenBank:WP_002212289.1;Name=WP_002212289.1;Ontology_term=GO:0036211,GO:0004077;gbkey=CDS;gene=birA;go_function=biotin--[biotin carboxyl-carrier protein] ligase activity|0004077||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019080256.1;locus_tag=AD853_RS11945;product=bifunctional biotin--[acetyl-CoA-carboxylase] ligase/biotin operon repressor BirA;protein_id=WP_002212289.1;transl_table=11 NZ_CPUY01000012.1 RefSeq gene 3279 4316 . - . ID=gene-AD853_RS11950;Name=murB;gbkey=Gene;gene=murB;gene_biotype=protein_coding;locus_tag=AD853_RS11950;old_locus_tag=ERS008462_02416 NZ_CPUY01000012.1 Protein Homology CDS 3279 4316 . - 0 ID=cds-WP_011191549.1;Parent=gene-AD853_RS11950;Dbxref=GenBank:WP_011191549.1;Name=WP_011191549.1;Ontology_term=GO:0008762,GO:0071949;gbkey=CDS;gene=murB;go_function=UDP-N-acetylmuramate dehydrogenase activity|0008762||IEA,FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004716469.1;locus_tag=AD853_RS11950;product=UDP-N-acetylmuramate dehydrogenase;protein_id=WP_011191549.1;transl_table=11 NZ_CPUY01000012.1 RefSeq gene 4780 4895 . - . ID=gene-AD853_RS11955;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=AD853_RS11955;old_locus_tag=ERS008462_02417 NZ_CPUY01000012.1 cmsearch rRNA 4780 4895 . - . ID=rna-AD853_RS11955;Parent=gene-AD853_RS11955;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD853_RS11955;product=5S ribosomal RNA NZ_CPUY01000012.1 cmsearch exon 4780 4895 . - . ID=exon-AD853_RS11955-1;Parent=rna-AD853_RS11955;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD853_RS11955;product=5S ribosomal RNA NZ_CPUY01000012.1 RefSeq gene 5006 7912 . - . ID=gene-AD853_RS11960;Name=AD853_RS11960;gbkey=Gene;gene_biotype=rRNA;locus_tag=AD853_RS11960;old_locus_tag=ERS008462_02418 NZ_CPUY01000012.1 cmsearch rRNA 5006 7912 . - . ID=rna-AD853_RS11960;Parent=gene-AD853_RS11960;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD853_RS11960;product=23S ribosomal RNA NZ_CPUY01000012.1 cmsearch exon 5006 7912 . - . ID=exon-AD853_RS11960-1;Parent=rna-AD853_RS11960;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD853_RS11960;product=23S ribosomal RNA NZ_CPUY01000012.1 RefSeq gene 8165 8240 . - . ID=gene-AD853_RS11965;Name=AD853_RS11965;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD853_RS11965;old_locus_tag=ERS008462_02420 NZ_CPUY01000012.1 tRNAscan-SE tRNA 8165 8240 . - . ID=rna-AD853_RS11965;Parent=gene-AD853_RS11965;anticodon=(pos:complement(8204..8206));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD853_RS11965;product=tRNA-Glu NZ_CPUY01000012.1 tRNAscan-SE exon 8165 8240 . - . ID=exon-AD853_RS11965-1;Parent=rna-AD853_RS11965;anticodon=(pos:complement(8204..8206));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD853_RS11965;product=tRNA-Glu NZ_CPUY01000012.1 RefSeq gene 8377 9919 . - . ID=gene-AD853_RS11970;Name=AD853_RS11970;gbkey=Gene;gene_biotype=rRNA;locus_tag=AD853_RS11970;old_locus_tag=ERS008462_02421 NZ_CPUY01000012.1 cmsearch rRNA 8377 9919 . - . ID=rna-AD853_RS11970;Parent=gene-AD853_RS11970;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD853_RS11970;product=16S ribosomal RNA NZ_CPUY01000012.1 cmsearch exon 8377 9919 . - . ID=exon-AD853_RS11970-1;Parent=rna-AD853_RS11970;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD853_RS11970;product=16S ribosomal RNA NZ_CPUY01000012.1 RefSeq gene 10376 11239 . - . ID=gene-AD853_RS11975;Name=murI;gbkey=Gene;gene=murI;gene_biotype=protein_coding;locus_tag=AD853_RS11975;old_locus_tag=ERS008462_02422 NZ_CPUY01000012.1 Protein Homology CDS 10376 11239 . - 0 ID=cds-WP_011191478.1;Parent=gene-AD853_RS11975;Dbxref=GenBank:WP_011191478.1;Name=WP_011191478.1;Ontology_term=GO:0008152,GO:0008881;gbkey=CDS;gene=murI;go_function=glutamate racemase activity|0008881||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008807849.1;locus_tag=AD853_RS11975;product=glutamate racemase;protein_id=WP_011191478.1;transl_table=11 NZ_CPUY01000012.1 RefSeq gene 11184 13058 . - . ID=gene-AD853_RS11980;Name=btuB;gbkey=Gene;gene=btuB;gene_biotype=protein_coding;locus_tag=AD853_RS11980;old_locus_tag=ERS008462_02423 NZ_CPUY01000012.1 Protein Homology CDS 11184 13058 . - 0 ID=cds-WP_038824308.1;Parent=gene-AD853_RS11980;Dbxref=GenBank:WP_038824308.1;Name=WP_038824308.1;Ontology_term=GO:0015889,GO:0015420;gbkey=CDS;gene=btuB;go_function=ABC-type vitamin B12 transporter activity|0015420||IEA;go_process=cobalamin transport|0015889||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002228170.1;locus_tag=AD853_RS11980;product=TonB-dependent vitamin B12 receptor BtuB;protein_id=WP_038824308.1;transl_table=11 NZ_CPUY01000012.1 cmsearch riboswitch 13146 13407 . - . ID=id-NZ_CPUY01000012.1:13146..13407;Dbxref=RFAM:RF00174;Note=cobalamin riboswitch;bound_moiety=adenosylcobalamin;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_CPUY01000012.1 RefSeq gene 13538 14641 . + . ID=gene-AD853_RS11990;Name=trmA;gbkey=Gene;gene=trmA;gene_biotype=protein_coding;locus_tag=AD853_RS11990;old_locus_tag=ERS008462_02425 NZ_CPUY01000012.1 Protein Homology CDS 13538 14641 . + 0 ID=cds-WP_002209474.1;Parent=gene-AD853_RS11990;Dbxref=GenBank:WP_002209474.1;Name=WP_002209474.1;Ontology_term=GO:0006396,GO:0030697;gbkey=CDS;gene=trmA;go_function=tRNA (uracil(54)-C5)-methyltransferase activity%2C S-adenosyl methionine-dependent|0030697||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209474.1;locus_tag=AD853_RS11990;product=tRNA (uridine(54)-C5)-methyltransferase TrmA;protein_id=WP_002209474.1;transl_table=11 NZ_CPUY01000012.1 RefSeq gene 14775 15182 . - . ID=gene-AD853_RS11995;Name=AD853_RS11995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS11995;old_locus_tag=ERS008462_02426 NZ_CPUY01000012.1 Protein Homology CDS 14775 15182 . - 0 ID=cds-WP_002209475.1;Parent=gene-AD853_RS11995;Dbxref=GenBank:WP_002209475.1;Name=WP_002209475.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209475.1;locus_tag=AD853_RS11995;product=YijD family membrane protein;protein_id=WP_002209475.1;transl_table=11 NZ_CPUY01000012.1 RefSeq gene 15195 15830 . - . ID=gene-AD853_RS12000;Name=fabR;gbkey=Gene;gene=fabR;gene_biotype=protein_coding;locus_tag=AD853_RS12000;old_locus_tag=ERS008462_02427 NZ_CPUY01000012.1 Protein Homology CDS 15195 15830 . - 0 ID=cds-WP_002209476.1;Parent=gene-AD853_RS12000;Dbxref=GenBank:WP_002209476.1;Name=WP_002209476.1;Ontology_term=GO:0003677;gbkey=CDS;gene=fabR;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209476.1;locus_tag=AD853_RS12000;product=HTH-type transcriptional repressor FabR;protein_id=WP_002209476.1;transl_table=11 NZ_CPUY01000012.1 RefSeq gene 16040 17440 . + . ID=gene-AD853_RS12005;Name=sthA;gbkey=Gene;gene=sthA;gene_biotype=protein_coding;locus_tag=AD853_RS12005;old_locus_tag=ERS008462_02428 NZ_CPUY01000012.1 Protein Homology CDS 16040 17440 . + 0 ID=cds-WP_002209477.1;Parent=gene-AD853_RS12005;Dbxref=GenBank:WP_002209477.1;Name=WP_002209477.1;Ontology_term=GO:0045454,GO:0003957,GO:0050660;gbkey=CDS;gene=sthA;go_function=NAD(P)+ transhydrogenase (Si-specific) activity|0003957||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017800705.1;locus_tag=AD853_RS12005;product=Si-specific NAD(P)(+) transhydrogenase;protein_id=WP_002209477.1;transl_table=11 NZ_CPUY01000012.1 RefSeq gene 17423 18340 . - . ID=gene-AD853_RS12010;Name=oxyR;gbkey=Gene;gene=oxyR;gene_biotype=protein_coding;locus_tag=AD853_RS12010;old_locus_tag=ERS008462_02429 NZ_CPUY01000012.1 Protein Homology CDS 17423 18340 . - 0 ID=cds-WP_002209478.1;Parent=gene-AD853_RS12010;Dbxref=GenBank:WP_002209478.1;Name=WP_002209478.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=oxyR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011191476.1;locus_tag=AD853_RS12010;product=DNA-binding transcriptional regulator OxyR;protein_id=WP_002209478.1;transl_table=11 NZ_CPUY01000012.1 RefSeq gene 18487 19218 . + . ID=gene-AD853_RS12015;Name=AD853_RS12015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS12015;old_locus_tag=ERS008462_02430 NZ_CPUY01000012.1 Protein Homology CDS 18487 19218 . + 0 ID=cds-WP_038824307.1;Parent=gene-AD853_RS12015;Dbxref=GenBank:WP_038824307.1;Name=WP_038824307.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209479.1;locus_tag=AD853_RS12015;product=glutathione peroxidase;protein_id=WP_038824307.1;transl_table=11 NZ_CPUY01000012.1 RefSeq gene 19312 20775 . + . ID=gene-AD853_RS12020;Name=AD853_RS12020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS12020;old_locus_tag=ERS008462_02431 NZ_CPUY01000012.1 Protein Homology CDS 19312 20775 . + 0 ID=cds-WP_002231139.1;Parent=gene-AD853_RS12020;Dbxref=GenBank:WP_002231139.1;Name=WP_002231139.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209480.1;locus_tag=AD853_RS12020;product=dihydrolipoyl dehydrogenase;protein_id=WP_002231139.1;transl_table=11 NZ_CPUY01000012.1 RefSeq gene 20891 21694 . - . ID=gene-AD853_RS12025;Name=AD853_RS12025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS12025;old_locus_tag=ERS008462_02432 NZ_CPUY01000012.1 Protein Homology CDS 20891 21694 . - 0 ID=cds-WP_050124604.1;Parent=gene-AD853_RS12025;Dbxref=GenBank:WP_050124604.1;Name=WP_050124604.1;Ontology_term=GO:0031992,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=energy transducer activity|0031992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011191474.1;locus_tag=AD853_RS12025;product=energy transducer TonB family protein;protein_id=WP_050124604.1;transl_table=11 NZ_CPUY01000012.1 RefSeq gene 21759 23087 . - . ID=gene-AD853_RS12030;Name=AD853_RS12030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS12030;old_locus_tag=ERS008462_02433 NZ_CPUY01000012.1 Protein Homology CDS 21759 23087 . - 0 ID=cds-WP_012104285.1;Parent=gene-AD853_RS12030;Dbxref=GenBank:WP_012104285.1;Name=WP_012104285.1;Ontology_term=GO:0015031,GO:0030253,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=protein transport|0015031||IEA,protein secretion by the type I secretion system|0030253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304746.1;locus_tag=AD853_RS12030;product=HlyD family type I secretion periplasmic adaptor subunit;protein_id=WP_012104285.1;transl_table=11 NZ_CPUY01000012.1 RefSeq gene 23163 24971 . - . ID=gene-AD853_RS12035;Name=AD853_RS12035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS12035;old_locus_tag=ERS008462_02434 NZ_CPUY01000012.1 Protein Homology CDS 23163 24971 . - 0 ID=cds-WP_038824305.1;Parent=gene-AD853_RS12035;Dbxref=GenBank:WP_038824305.1;Name=WP_038824305.1;Ontology_term=GO:0030253,GO:0005524,GO:0016887,GO:0034040,GO:0140359,GO:0030256;gbkey=CDS;go_component=type I protein secretion system complex|0030256||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled lipid transmembrane transporter activity|0034040||IEA,ABC-type transporter activity|0140359||IEA;go_process=protein secretion by the type I secretion system|0030253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012230143.1;locus_tag=AD853_RS12035;product=type I secretion system permease/ATPase;protein_id=WP_038824305.1;transl_table=11 NZ_CPUY01000012.1 RefSeq gene 25137 25745 . - . ID=gene-AD853_RS12040;Name=AD853_RS12040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS12040;old_locus_tag=ERS008462_02435 NZ_CPUY01000012.1 Protein Homology CDS 25137 25745 . - 0 ID=cds-WP_038824304.1;Parent=gene-AD853_RS12040;Dbxref=GenBank:WP_038824304.1;Name=WP_038824304.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209484.1;locus_tag=AD853_RS12040;product=heme acquisition protein HasA;protein_id=WP_038824304.1;transl_table=11 NZ_CPUY01000012.1 RefSeq pseudogene 25974 28464 . - . ID=gene-AD853_RS12045;Name=AD853_RS12045;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD853_RS12045;pseudo=true NZ_CPUY01000012.1 Protein Homology CDS 25974 28464 . - 0 ID=cds-AD853_RS12045;Parent=gene-AD853_RS12045;Note=frameshifted;Ontology_term=GO:0055085,GO:0022857,GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011191470.1;locus_tag=AD853_RS12045;product=TonB-dependent hemoglobin/transferrin/lactoferrin family receptor;pseudo=true;transl_table=11 NZ_CPUY01000012.1 RefSeq gene 29063 30436 . - . ID=gene-AD853_RS12055;Name=argH;gbkey=Gene;gene=argH;gene_biotype=protein_coding;locus_tag=AD853_RS12055;old_locus_tag=ERS008462_02439 NZ_CPUY01000012.1 Protein Homology CDS 29063 30436 . - 0 ID=cds-WP_038824301.1;Parent=gene-AD853_RS12055;Dbxref=GenBank:WP_038824301.1;Name=WP_038824301.1;Ontology_term=GO:0042450,GO:0004056;gbkey=CDS;gene=argH;go_function=argininosuccinate lyase activity|0004056||IEA;go_process=L-arginine biosynthetic process via ornithine|0042450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005163844.1;locus_tag=AD853_RS12055;product=argininosuccinate lyase;protein_id=WP_038824301.1;transl_table=11 NZ_CPUY01000012.1 RefSeq gene 30603 31379 . - . ID=gene-AD853_RS12060;Name=argB;gbkey=Gene;gene=argB;gene_biotype=protein_coding;locus_tag=AD853_RS12060;old_locus_tag=ERS008462_02440 NZ_CPUY01000012.1 Protein Homology CDS 30603 31379 . - 0 ID=cds-WP_002215335.1;Parent=gene-AD853_RS12060;Dbxref=GenBank:WP_002215335.1;Name=WP_002215335.1;Ontology_term=GO:0006592,GO:0003991,GO:0005737;gbkey=CDS;gene=argB;go_component=cytoplasm|0005737||IEA;go_function=acetylglutamate kinase activity|0003991||IEA;go_process=ornithine biosynthetic process|0006592||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002215335.1;locus_tag=AD853_RS12060;product=acetylglutamate kinase;protein_id=WP_002215335.1;transl_table=11 NZ_CPUY01000012.1 RefSeq gene 31545 32549 . - . ID=gene-AD853_RS12065;Name=argC;gbkey=Gene;gene=argC;gene_biotype=protein_coding;locus_tag=AD853_RS12065;old_locus_tag=ERS008462_02441 NZ_CPUY01000012.1 Protein Homology CDS 31545 32549 . - 0 ID=cds-WP_011191468.1;Parent=gene-AD853_RS12065;Dbxref=GenBank:WP_011191468.1;Name=WP_011191468.1;Ontology_term=GO:0006526,GO:0006592,GO:0003942,GO:0070401;gbkey=CDS;gene=argC;go_function=N-acetyl-gamma-glutamyl-phosphate reductase activity|0003942||IEA,NADP+ binding|0070401||IEA;go_process=L-arginine biosynthetic process|0006526||IEA,ornithine biosynthetic process|0006592||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005278246.1;locus_tag=AD853_RS12065;product=N-acetyl-gamma-glutamyl-phosphate reductase;protein_id=WP_011191468.1;transl_table=11 NZ_CPUY01000012.1 RefSeq gene 32800 33963 . + . ID=gene-AD853_RS12070;Name=argE;gbkey=Gene;gene=argE;gene_biotype=protein_coding;locus_tag=AD853_RS12070;old_locus_tag=ERS008462_02442 NZ_CPUY01000012.1 Protein Homology CDS 32800 33963 . + 0 ID=cds-WP_002223919.1;Parent=gene-AD853_RS12070;Dbxref=GenBank:WP_002223919.1;Name=WP_002223919.1;Ontology_term=GO:0006526,GO:0019213;gbkey=CDS;gene=argE;go_function=deacetylase activity|0019213||IEA;go_process=L-arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002223919.1;locus_tag=AD853_RS12070;product=acetylornithine deacetylase;protein_id=WP_002223919.1;transl_table=11 NZ_CPUY01000012.1 RefSeq gene 34337 36973 . + . ID=gene-AD853_RS12075;Name=ppc;gbkey=Gene;gene=ppc;gene_biotype=protein_coding;locus_tag=AD853_RS12075;old_locus_tag=ERS008462_02443 NZ_CPUY01000012.1 Protein Homology CDS 34337 36973 . + 0 ID=cds-WP_011191467.1;Parent=gene-AD853_RS12075;Dbxref=GenBank:WP_011191467.1;Name=WP_011191467.1;Ontology_term=GO:0006099,GO:0015977,GO:0008964;gbkey=CDS;gene=ppc;go_function=phosphoenolpyruvate carboxylase activity|0008964||IEA;go_process=tricarboxylic acid cycle|0006099||IEA,carbon fixation|0015977||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709756.1;locus_tag=AD853_RS12075;product=phosphoenolpyruvate carboxylase;protein_id=WP_011191467.1;transl_table=11 NZ_CPUY01000012.1 RefSeq gene 37808 38692 . - . ID=gene-AD853_RS12085;Name=metF;gbkey=Gene;gene=metF;gene_biotype=protein_coding;locus_tag=AD853_RS12085;old_locus_tag=ERS008462_02444 NZ_CPUY01000012.1 Protein Homology CDS 37808 38692 . - 0 ID=cds-WP_038824403.1;Parent=gene-AD853_RS12085;Dbxref=GenBank:WP_038824403.1;Name=WP_038824403.1;Ontology_term=GO:0009086,GO:0004489;gbkey=CDS;gene=metF;go_function=methylenetetrahydrofolate reductase [NAD(P)H] activity|0004489||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208933.1;locus_tag=AD853_RS12085;product=methylenetetrahydrofolate reductase;protein_id=WP_038824403.1;transl_table=11 NZ_CPUY01000012.1 RefSeq gene 38925 41360 . - . ID=gene-AD853_RS12090;Name=AD853_RS12090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS12090;old_locus_tag=ERS008462_02445 NZ_CPUY01000012.1 Protein Homology CDS 38925 41360 . - 0 ID=cds-WP_002208934.1;Parent=gene-AD853_RS12090;Dbxref=GenBank:WP_002208934.1;Name=WP_002208934.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013649013.1;locus_tag=AD853_RS12090;product=bifunctional aspartate kinase/homoserine dehydrogenase II;protein_id=WP_002208934.1;transl_table=11 NZ_CPUY01000012.1 RefSeq gene 41363 42523 . - . ID=gene-AD853_RS12095;Name=metB;gbkey=Gene;gene=metB;gene_biotype=protein_coding;locus_tag=AD853_RS12095;old_locus_tag=ERS008462_02446 NZ_CPUY01000012.1 Protein Homology CDS 41363 42523 . - 0 ID=cds-WP_011191466.1;Parent=gene-AD853_RS12095;Dbxref=GenBank:WP_011191466.1;Name=WP_011191466.1;Ontology_term=GO:0019346,GO:0003824,GO:0030170;gbkey=CDS;gene=metB;go_function=catalytic activity|0003824||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=transsulfuration|0019346||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019452240.1;locus_tag=AD853_RS12095;product=cystathionine gamma-synthase;protein_id=WP_011191466.1;transl_table=11 NZ_CPUY01000012.1 RefSeq gene 42901 43218 . + . ID=gene-AD853_RS12100;Name=metJ;gbkey=Gene;gene=metJ;gene_biotype=protein_coding;locus_tag=AD853_RS12100;old_locus_tag=ERS008462_02447 NZ_CPUY01000012.1 Protein Homology CDS 42901 43218 . + 0 ID=cds-WP_004392248.1;Parent=gene-AD853_RS12100;Dbxref=GenBank:WP_004392248.1;Name=WP_004392248.1;gbkey=CDS;gene=metJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015855437.1;locus_tag=AD853_RS12100;product=met regulon transcriptional regulator MetJ;protein_id=WP_004392248.1;transl_table=11 NZ_CPUY01000012.1 RefSeq gene 43567 44022 . + . ID=gene-AD853_RS12110;Name=yiaA;gbkey=Gene;gene=yiaA;gene_biotype=protein_coding;locus_tag=AD853_RS12110;old_locus_tag=ERS008462_02448 NZ_CPUY01000012.1 Protein Homology CDS 43567 44022 . + 0 ID=cds-WP_038824402.1;Parent=gene-AD853_RS12110;Dbxref=GenBank:WP_038824402.1;Name=WP_038824402.1;gbkey=CDS;gene=yiaA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208936.1;locus_tag=AD853_RS12110;product=inner membrane protein YiaA;protein_id=WP_038824402.1;transl_table=11 NZ_CPUY01000012.1 RefSeq gene 44529 44744 . - . ID=gene-AD853_RS12115;Name=rpmE;gbkey=Gene;gene=rpmE;gene_biotype=protein_coding;locus_tag=AD853_RS12115;old_locus_tag=ERS008462_02449 NZ_CPUY01000012.1 Protein Homology CDS 44529 44744 . - 0 ID=cds-WP_002216737.1;Parent=gene-AD853_RS12115;Dbxref=GenBank:WP_002216737.1;Name=WP_002216737.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmE;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010847674.1;locus_tag=AD853_RS12115;product=50S ribosomal protein L31;protein_id=WP_002216737.1;transl_table=11 NZ_CPUY01000012.1 RefSeq gene 44998 47196 . + . ID=gene-AD853_RS12120;Name=priA;gbkey=Gene;gene=priA;gene_biotype=protein_coding;locus_tag=AD853_RS12120;old_locus_tag=ERS008462_02450 NZ_CPUY01000012.1 Protein Homology CDS 44998 47196 . + 0 ID=cds-WP_012104279.1;Parent=gene-AD853_RS12120;Dbxref=GenBank:WP_012104279.1;Name=WP_012104279.1;gbkey=CDS;gene=priA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005175847.1;locus_tag=AD853_RS12120;product=primosomal protein N';protein_id=WP_012104279.1;transl_table=11 NZ_CPUY01000012.1 RefSeq gene 47283 47426 . + . ID=gene-AD853_RS22205;Name=AD853_RS22205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS22205;old_locus_tag=ERS008462_02451 NZ_CPUY01000012.1 Protein Homology CDS 47283 47426 . + 0 ID=cds-WP_002216732.1;Parent=gene-AD853_RS22205;Dbxref=GenBank:WP_002216732.1;Name=WP_002216732.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002216732.1;locus_tag=AD853_RS22205;product=hypothetical protein;protein_id=WP_002216732.1;transl_table=11 NZ_CPUY01000012.1 RefSeq gene 47549 48577 . + . ID=gene-AD853_RS12130;Name=cytR;gbkey=Gene;gene=cytR;gene_biotype=protein_coding;locus_tag=AD853_RS12130;old_locus_tag=ERS008462_02452 NZ_CPUY01000012.1 Protein Homology CDS 47549 48577 . + 0 ID=cds-WP_002216730.1;Parent=gene-AD853_RS12130;Dbxref=GenBank:WP_002216730.1;Name=WP_002216730.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=cytR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002216730.1;locus_tag=AD853_RS12130;product=DNA-binding transcriptional regulator CytR;protein_id=WP_002216730.1;transl_table=11 NZ_CPUY01000012.1 RefSeq gene 48643 49488 . + . ID=gene-AD853_RS12135;Name=ftsN;gbkey=Gene;gene=ftsN;gene_biotype=protein_coding;locus_tag=AD853_RS12135;old_locus_tag=ERS008462_02453 NZ_CPUY01000012.1 Protein Homology CDS 48643 49488 . + 0 ID=cds-WP_038824400.1;Parent=gene-AD853_RS12135;Dbxref=GenBank:WP_038824400.1;Name=WP_038824400.1;Ontology_term=GO:0000910,GO:0005515;gbkey=CDS;gene=ftsN;go_function=protein binding|0005515||IEA;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208941.1;locus_tag=AD853_RS12135;product=cell division protein FtsN;protein_id=WP_038824400.1;transl_table=11 NZ_CPUY01000012.1 RefSeq gene 49588 50112 . + . ID=gene-AD853_RS12140;Name=hslV;gbkey=Gene;gene=hslV;gene_biotype=protein_coding;locus_tag=AD853_RS12140;old_locus_tag=ERS008462_02454 NZ_CPUY01000012.1 Protein Homology CDS 49588 50112 . + 0 ID=cds-WP_002208942.1;Parent=gene-AD853_RS12140;Dbxref=GenBank:WP_002208942.1;Name=WP_002208942.1;Ontology_term=GO:0051603,GO:0004298,GO:0009376;gbkey=CDS;gene=hslV;go_component=HslUV protease complex|0009376||IEA;go_function=threonine-type endopeptidase activity|0004298||IEA;go_process=proteolysis involved in protein catabolic process|0051603||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005279166.1;locus_tag=AD853_RS12140;product=ATP-dependent protease subunit HslV;protein_id=WP_002208942.1;transl_table=11 NZ_CPUY01000012.1 RefSeq gene 50183 51514 . + . ID=gene-AD853_RS12145;Name=hslU;gbkey=Gene;gene=hslU;gene_biotype=protein_coding;locus_tag=AD853_RS12145;old_locus_tag=ERS008462_02455 NZ_CPUY01000012.1 Protein Homology CDS 50183 51514 . + 0 ID=cds-WP_002208943.1;Parent=gene-AD853_RS12145;Dbxref=GenBank:WP_002208943.1;Name=WP_002208943.1;Ontology_term=GO:0006508,GO:0004176,GO:0005524,GO:0009376;gbkey=CDS;gene=hslU;go_component=HslUV protease complex|0009376||IEA;go_function=ATP-dependent peptidase activity|0004176||IEA,ATP binding|0005524||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019841241.1;locus_tag=AD853_RS12145;product=HslU--HslV peptidase ATPase subunit;protein_id=WP_002208943.1;transl_table=11 NZ_CPUY01000012.1 RefSeq gene 51749 52666 . + . ID=gene-AD853_RS12150;Name=AD853_RS12150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS12150;old_locus_tag=ERS008462_02456 NZ_CPUY01000012.1 Protein Homology CDS 51749 52666 . + 0 ID=cds-WP_012104277.1;Parent=gene-AD853_RS12150;Dbxref=GenBank:WP_012104277.1;Name=WP_012104277.1;Ontology_term=GO:0009234,GO:0046428,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=1%2C4-dihydroxy-2-naphthoate polyprenyltransferase activity|0046428||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208944.1;locus_tag=AD853_RS12150;product=1%2C4-dihydroxy-2-naphthoate polyprenyltransferase;protein_id=WP_012104277.1;transl_table=11 NZ_CPUY01000012.1 RefSeq gene 52808 53293 . + . ID=gene-AD853_RS12155;Name=rraA;gbkey=Gene;gene=rraA;gene_biotype=protein_coding;locus_tag=AD853_RS12155;old_locus_tag=ERS008462_02457 NZ_CPUY01000012.1 Protein Homology CDS 52808 53293 . + 0 ID=cds-WP_002208945.1;Parent=gene-AD853_RS12155;Dbxref=GenBank:WP_002208945.1;Name=WP_002208945.1;Ontology_term=GO:0051252,GO:0008428;gbkey=CDS;gene=rraA;go_function=ribonuclease inhibitor activity|0008428||IEA;go_process=regulation of RNA metabolic process|0051252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001392924.1;locus_tag=AD853_RS12155;product=ribonuclease E activity regulator RraA;protein_id=WP_002208945.1;transl_table=11 NZ_CPUY01000012.1 RefSeq gene 53410 53943 . - . ID=gene-AD853_RS12160;Name=AD853_RS12160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS12160;old_locus_tag=ERS008462_02458 NZ_CPUY01000012.1 Protein Homology CDS 53410 53943 . - 0 ID=cds-WP_002208946.1;Parent=gene-AD853_RS12160;Dbxref=GenBank:WP_002208946.1;Name=WP_002208946.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208946.1;locus_tag=AD853_RS12160;product=DUF4232 domain-containing protein;protein_id=WP_002208946.1;transl_table=11 NZ_CPUY01000012.1 RefSeq gene 54624 54863 . - . ID=gene-AD853_RS12170;Name=AD853_RS12170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS12170;old_locus_tag=ERS008462_02459 NZ_CPUY01000012.1 Protein Homology CDS 54624 54863 . - 0 ID=cds-WP_002215873.1;Parent=gene-AD853_RS12170;Dbxref=GenBank:WP_002215873.1;Name=WP_002215873.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002215873.1;locus_tag=AD853_RS12170;product=hypothetical protein;protein_id=WP_002215873.1;transl_table=11 NZ_CPUY01000012.1 RefSeq gene 55076 56368 . + . ID=gene-AD853_RS12175;Name=AD853_RS12175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS12175;old_locus_tag=ERS008462_02460 NZ_CPUY01000012.1 Protein Homology CDS 55076 56368 . + 0 ID=cds-WP_038824398.1;Parent=gene-AD853_RS12175;Dbxref=GenBank:WP_038824398.1;Name=WP_038824398.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208949.1;locus_tag=AD853_RS12175;product=HlyD family secretion protein;protein_id=WP_038824398.1;transl_table=11 NZ_CPUY01000012.1 RefSeq gene 56361 58475 . + . ID=gene-AD853_RS12180;Name=AD853_RS12180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS12180;old_locus_tag=ERS008462_02461 NZ_CPUY01000012.1 Protein Homology CDS 56361 58475 . + 0 ID=cds-WP_011191463.1;Parent=gene-AD853_RS12180;Dbxref=GenBank:WP_011191463.1;Name=WP_011191463.1;Ontology_term=GO:0005524,GO:0008233,GO:0016887,GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,peptidase activity|0008233||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002230357.1;locus_tag=AD853_RS12180;product=peptidase domain-containing ABC transporter;protein_id=WP_011191463.1;transl_table=11 NZ_CPUY01000012.1 RefSeq gene 58480 58683 . - . ID=gene-AD853_RS22505;Name=AD853_RS22505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS22505 NZ_CPUY01000012.1 Protein Homology CDS 58480 58683 . - 0 ID=cds-WP_015683517.1;Parent=gene-AD853_RS22505;Dbxref=GenBank:WP_015683517.1;Name=WP_015683517.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015683517.1;locus_tag=AD853_RS22505;product=hypothetical protein;protein_id=WP_015683517.1;transl_table=11 NZ_CPUY01000012.1 RefSeq gene 58816 59055 . - . ID=gene-AD853_RS12185;Name=zapB;gbkey=Gene;gene=zapB;gene_biotype=protein_coding;locus_tag=AD853_RS12185;old_locus_tag=ERS008462_02462 NZ_CPUY01000012.1 Protein Homology CDS 58816 59055 . - 0 ID=cds-WP_002208953.1;Parent=gene-AD853_RS12185;Dbxref=GenBank:WP_002208953.1;Name=WP_002208953.1;gbkey=CDS;gene=zapB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009114846.1;locus_tag=AD853_RS12185;product=septal ring assembly protein ZapB;protein_id=WP_002208953.1;transl_table=11 NZ_CPUY01000012.1 RefSeq gene 59667 60515 . + . ID=gene-AD853_RS12200;Name=AD853_RS12200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS12200;old_locus_tag=ERS008462_02463 NZ_CPUY01000012.1 Protein Homology CDS 59667 60515 . + 0 ID=cds-WP_038824321.1;Parent=gene-AD853_RS12200;Dbxref=GenBank:WP_038824321.1;Name=WP_038824321.1;Ontology_term=GO:0055085,GO:0015267;gbkey=CDS;go_function=channel activity|0015267||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016266314.1;locus_tag=AD853_RS12200;product=MIP/aquaporin family protein;protein_id=WP_038824321.1;transl_table=11 NZ_CPUY01000012.1 RefSeq gene 60692 62215 . + . ID=gene-AD853_RS12205;Name=glpK;gbkey=Gene;gene=glpK;gene_biotype=protein_coding;locus_tag=AD853_RS12205;old_locus_tag=ERS008462_02464 NZ_CPUY01000012.1 Protein Homology CDS 60692 62215 . + 0 ID=cds-WP_038824323.1;Parent=gene-AD853_RS12205;Dbxref=GenBank:WP_038824323.1;Name=WP_038824323.1;Ontology_term=GO:0006072,GO:0004370;gbkey=CDS;gene=glpK;go_function=glycerol kinase activity|0004370||IEA;go_process=glycerol-3-phosphate metabolic process|0006072||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004710532.1;locus_tag=AD853_RS12205;product=glycerol kinase GlpK;protein_id=WP_038824323.1;transl_table=11 NZ_CPUY01000012.1 RefSeq gene 62468 63478 . + . ID=gene-AD853_RS12210;Name=glpX;gbkey=Gene;gene=glpX;gene_biotype=protein_coding;locus_tag=AD853_RS12210;old_locus_tag=ERS008462_02465 NZ_CPUY01000012.1 Protein Homology CDS 62468 63478 . + 0 ID=cds-WP_050124605.1;Parent=gene-AD853_RS12210;Dbxref=GenBank:WP_050124605.1;Name=WP_050124605.1;Ontology_term=GO:0006071,GO:0006094,GO:0042132;gbkey=CDS;gene=glpX;go_function=fructose 1%2C6-bisphosphate 1-phosphatase activity|0042132||IEA;go_process=glycerol metabolic process|0006071||IEA,gluconeogenesis|0006094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229467.1;locus_tag=AD853_RS12210;product=class II fructose-bisphosphatase;protein_id=WP_050124605.1;transl_table=11 NZ_CPUY01000012.1 RefSeq gene 63633 64379 . + . ID=gene-AD853_RS12215;Name=fpr;gbkey=Gene;gene=fpr;gene_biotype=protein_coding;locus_tag=AD853_RS12215;old_locus_tag=ERS008462_02466 NZ_CPUY01000012.1 Protein Homology CDS 63633 64379 . + 0 ID=cds-WP_002208956.1;Parent=gene-AD853_RS12215;Dbxref=GenBank:WP_002208956.1;Name=WP_002208956.1;Ontology_term=GO:0004324;gbkey=CDS;gene=fpr;go_function=ferredoxin-NADP+ reductase activity|0004324||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208956.1;locus_tag=AD853_RS12215;product=ferredoxin--NADP(+) reductase;protein_id=WP_002208956.1;transl_table=11 NZ_CPUY01000012.1 RefSeq gene 64719 65153 . - . ID=gene-AD853_RS12220;Name=AD853_RS12220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS12220;old_locus_tag=ERS008462_02467 NZ_CPUY01000012.1 Protein Homology CDS 64719 65153 . - 0 ID=cds-WP_002208957.1;Parent=gene-AD853_RS12220;Dbxref=GenBank:WP_002208957.1;Name=WP_002208957.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005175880.1;locus_tag=AD853_RS12220;product=DUF805 domain-containing protein;protein_id=WP_002208957.1;transl_table=11 NZ_CPUY01000012.1 RefSeq gene 65322 65936 . + . ID=gene-AD853_RS12225;Name=AD853_RS12225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS12225;old_locus_tag=ERS008462_02468 NZ_CPUY01000012.1 Protein Homology CDS 65322 65936 . + 0 ID=cds-WP_002208958.1;Parent=gene-AD853_RS12225;Dbxref=GenBank:WP_002208958.1;Name=WP_002208958.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208958.1;locus_tag=AD853_RS12225;product=DUF1454 family protein;protein_id=WP_002208958.1;transl_table=11 NZ_CPUY01000012.1 RefSeq gene 66065 66832 . + . ID=gene-AD853_RS12230;Name=tpiA;gbkey=Gene;gene=tpiA;gene_biotype=protein_coding;locus_tag=AD853_RS12230;old_locus_tag=ERS008462_02469 NZ_CPUY01000012.1 Protein Homology CDS 66065 66832 . + 0 ID=cds-WP_002208959.1;Parent=gene-AD853_RS12230;Dbxref=GenBank:WP_002208959.1;Name=WP_002208959.1;Ontology_term=GO:0006096,GO:0004807;gbkey=CDS;gene=tpiA;go_function=triose-phosphate isomerase activity|0004807||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005175887.1;locus_tag=AD853_RS12230;product=triose-phosphate isomerase;protein_id=WP_002208959.1;transl_table=11 NZ_CPUY01000012.1 RefSeq gene 67062 68297 . - . ID=gene-AD853_RS12235;Name=AD853_RS12235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS12235;old_locus_tag=ERS008462_02470 NZ_CPUY01000012.1 Protein Homology CDS 67062 68297 . - 0 ID=cds-WP_038824324.1;Parent=gene-AD853_RS12235;Dbxref=GenBank:WP_038824324.1;Name=WP_038824324.1;Ontology_term=GO:0001216,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription activator activity|0001216||IEA,DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208960.1;locus_tag=AD853_RS12235;product=LysR family transcriptional regulator;protein_id=WP_038824324.1;transl_table=11 NZ_CPUY01000012.1 RefSeq gene 68434 69171 . + . ID=gene-AD853_RS12240;Name=AD853_RS12240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS12240;old_locus_tag=ERS008462_02471 NZ_CPUY01000012.1 Protein Homology CDS 68434 69171 . + 0 ID=cds-WP_002208961.1;Parent=gene-AD853_RS12240;Dbxref=GenBank:WP_002208961.1;Name=WP_002208961.1;Ontology_term=GO:0019213;gbkey=CDS;go_function=deacetylase activity|0019213||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002356630.1;locus_tag=AD853_RS12240;product=PIG-L deacetylase family protein;protein_id=WP_002208961.1;transl_table=11 NZ_CPUY01000012.1 RefSeq gene 69168 69881 . + . ID=gene-AD853_RS12245;Name=AD853_RS12245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS12245;old_locus_tag=ERS008462_02472 NZ_CPUY01000012.1 Protein Homology CDS 69168 69881 . + 0 ID=cds-WP_002208962.1;Parent=gene-AD853_RS12245;Dbxref=GenBank:WP_002208962.1;Name=WP_002208962.1;Ontology_term=GO:0047443;gbkey=CDS;go_function=4-hydroxy-4-methyl-2-oxoglutarate aldolase activity|0047443||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208962.1;locus_tag=AD853_RS12245;product=4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase;protein_id=WP_002208962.1;transl_table=11 NZ_CPUY01000012.1 RefSeq gene 69947 71374 . + . ID=gene-AD853_RS12250;Name=AD853_RS12250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS12250;old_locus_tag=ERS008462_02473 NZ_CPUY01000012.1 Protein Homology CDS 69947 71374 . + 0 ID=cds-WP_002208963.1;Parent=gene-AD853_RS12250;Dbxref=GenBank:WP_002208963.1;Name=WP_002208963.1;Ontology_term=GO:0022857,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304755.1;locus_tag=AD853_RS12250;product=anion permease;protein_id=WP_002208963.1;transl_table=11 NZ_CPUY01000012.1 RefSeq gene 71492 72268 . + . ID=gene-AD853_RS12255;Name=AD853_RS12255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS12255;old_locus_tag=ERS008462_02474 NZ_CPUY01000012.1 Protein Homology CDS 71492 72268 . + 0 ID=cds-WP_011191460.1;Parent=gene-AD853_RS12255;Dbxref=GenBank:WP_011191460.1;Name=WP_011191460.1;Ontology_term=GO:0005488;gbkey=CDS;go_function=binding|0005488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016257829.1;locus_tag=AD853_RS12255;product=substrate-binding domain-containing protein;protein_id=WP_011191460.1;transl_table=11 NZ_CPUY01000012.1 RefSeq gene 72300 72440 . - . ID=gene-AD853_RS21850;Name=AD853_RS21850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS21850 NZ_CPUY01000012.1 Protein Homology CDS 72300 72440 . - 0 ID=cds-WP_002221682.1;Parent=gene-AD853_RS21850;Dbxref=GenBank:WP_002221682.1;Name=WP_002221682.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304756.1;locus_tag=AD853_RS21850;product=hypothetical protein;protein_id=WP_002221682.1;transl_table=11 NZ_CPUY01000012.1 RefSeq gene 72518 73507 . - . ID=gene-AD853_RS12260;Name=AD853_RS12260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS12260;old_locus_tag=ERS008462_02476 NZ_CPUY01000012.1 Protein Homology CDS 72518 73507 . - 0 ID=cds-WP_012304757.1;Parent=gene-AD853_RS12260;Dbxref=GenBank:WP_012304757.1;Name=WP_012304757.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304757.1;locus_tag=AD853_RS12260;product=sulfate ABC transporter substrate-binding protein;protein_id=WP_012304757.1;transl_table=11 NZ_CPUY01000012.1 RefSeq gene 73728 74711 . - . ID=gene-AD853_RS12265;Name=pfkA;gbkey=Gene;gene=pfkA;gene_biotype=protein_coding;locus_tag=AD853_RS12265;old_locus_tag=ERS008462_02477 NZ_CPUY01000012.1 Protein Homology CDS 73728 74711 . - 0 ID=cds-WP_011191458.1;Parent=gene-AD853_RS12265;Dbxref=GenBank:WP_011191458.1;Name=WP_011191458.1;Ontology_term=GO:0006002,GO:0006096,GO:0005524;gbkey=CDS;gene=pfkA;go_function=ATP binding|0005524||IEA;go_process=fructose 6-phosphate metabolic process|0006002||IEA,glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224375.1;locus_tag=AD853_RS12265;product=6-phosphofructokinase;protein_id=WP_011191458.1;transl_table=11 NZ_CPUY01000012.1 RefSeq gene 74929 75831 . - . ID=gene-AD853_RS12270;Name=fieF;gbkey=Gene;gene=fieF;gene_biotype=protein_coding;locus_tag=AD853_RS12270;old_locus_tag=ERS008462_02478 NZ_CPUY01000012.1 Protein Homology CDS 74929 75831 . - 0 ID=cds-WP_002208967.1;Parent=gene-AD853_RS12270;Dbxref=GenBank:WP_002208967.1;Name=WP_002208967.1;Note=FieF%2C a metal efflux transporter%2C is a member of the CDF (cation diffusion facilitator) family of transporters.;Ontology_term=GO:0006812,GO:0055085,GO:0008324,GO:0016020;gbkey=CDS;gene=fieF;go_component=membrane|0016020||IEA;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA;go_process=monoatomic cation transport|0006812||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208967.1;locus_tag=AD853_RS12270;product=CDF family cation-efflux transporter FieF;protein_id=WP_002208967.1;transl_table=11 NZ_CPUY01000012.1 RefSeq pseudogene 76004 76135 . + . ID=gene-AD853_RS22680;Name=AD853_RS22680;end_range=76135,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD853_RS22680;partial=true;pseudo=true NZ_CPUY01000012.1 Protein Homology CDS 76004 76135 . + 0 ID=cds-AD853_RS22680;Parent=gene-AD853_RS22680;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006310,GO:0015074,GO:0032196,GO:0003677,GO:0004803;end_range=76135,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA,transposition|0032196||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013184705.1;locus_tag=AD853_RS22680;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_CPUY01000012.1 RefSeq pseudogene 76206 76393 . + . ID=gene-AD853_RS22685;Name=AD853_RS22685;end_range=76393,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD853_RS22685;partial=true;pseudo=true;start_range=.,76206 NZ_CPUY01000012.1 Protein Homology CDS 76206 76393 . + 0 ID=cds-AD853_RS22685;Parent=gene-AD853_RS22685;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=76393,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013184705.1;locus_tag=AD853_RS22685;partial=true;product=IS5/IS1182 family transposase;pseudo=true;start_range=.,76206;transl_table=11 NZ_CPUY01000012.1 RefSeq gene 76393 77313 . - . ID=gene-AD853_RS12275;Name=AD853_RS12275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS12275;old_locus_tag=ERS008462_02479 NZ_CPUY01000012.1 Protein Homology CDS 76393 77313 . - 0 ID=cds-WP_002353252.1;Parent=gene-AD853_RS12275;Dbxref=GenBank:WP_002353252.1;Name=WP_002353252.1;Ontology_term=GO:0006310,GO:0015074,GO:0032196,GO:0003677,GO:0004536,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA nuclease activity|0004536||IEA,transposase activity|0004803||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA,transposition|0032196||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002353252.1;locus_tag=AD853_RS12275;product=Rpn family recombination-promoting nuclease/putative transposase;protein_id=WP_002353252.1;transl_table=11 NZ_CPUY01000012.1 RefSeq pseudogene 77540 77872 . + . ID=gene-AD853_RS20695;Name=AD853_RS20695;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD853_RS20695;partial=true;pseudo=true;start_range=.,77540 NZ_CPUY01000012.1 Protein Homology CDS 77540 77872 . + 0 ID=cds-AD853_RS20695;Parent=gene-AD853_RS20695;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016266554.1;locus_tag=AD853_RS20695;partial=true;product=tyrosine-type recombinase/integrase;pseudo=true;start_range=.,77540;transl_table=11 NZ_CPUY01000012.1 RefSeq gene 78030 78518 . - . ID=gene-AD853_RS12280;Name=cpxP;gbkey=Gene;gene=cpxP;gene_biotype=protein_coding;locus_tag=AD853_RS12280;old_locus_tag=ERS008462_02481 NZ_CPUY01000012.1 Protein Homology CDS 78030 78518 . - 0 ID=cds-WP_002208969.1;Parent=gene-AD853_RS12280;Dbxref=GenBank:WP_002208969.1;Name=WP_002208969.1;gbkey=CDS;gene=cpxP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011191457.1;locus_tag=AD853_RS12280;product=cell-envelope stress modulator CpxP;protein_id=WP_002208969.1;transl_table=11 NZ_CPUY01000012.1 RefSeq gene 78692 79390 . + . ID=gene-AD853_RS12285;Name=cpxR;gbkey=Gene;gene=cpxR;gene_biotype=protein_coding;locus_tag=AD853_RS12285;old_locus_tag=ERS008462_02482 NZ_CPUY01000012.1 Protein Homology CDS 78692 79390 . + 0 ID=cds-WP_002208970.1;Parent=gene-AD853_RS12285;Dbxref=GenBank:WP_002208970.1;Name=WP_002208970.1;gbkey=CDS;gene=cpxR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208970.1;locus_tag=AD853_RS12285;product=envelope stress response regulator transcription factor CpxR;protein_id=WP_002208970.1;transl_table=11 NZ_CPUY01000012.1 RefSeq gene 79387 80763 . + . ID=gene-AD853_RS12290;Name=cpxA;gbkey=Gene;gene=cpxA;gene_biotype=protein_coding;locus_tag=AD853_RS12290;old_locus_tag=ERS008462_02483 NZ_CPUY01000012.1 Protein Homology CDS 79387 80763 . + 0 ID=cds-WP_038824325.1;Parent=gene-AD853_RS12290;Dbxref=GenBank:WP_038824325.1;Name=WP_038824325.1;Ontology_term=GO:0007165,GO:0000155;gbkey=CDS;gene=cpxA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208971.1;locus_tag=AD853_RS12290;product=envelope stress sensor histidine kinase CpxA;protein_id=WP_038824325.1;transl_table=11 NZ_CPUY01000012.1 RefSeq gene 80812 81876 . - . ID=gene-AD853_RS12295;Name=ada;gbkey=Gene;gene=ada;gene_biotype=protein_coding;locus_tag=AD853_RS12295;old_locus_tag=ERS008462_02484 NZ_CPUY01000012.1 Protein Homology CDS 80812 81876 . - 0 ID=cds-WP_038824327.1;Parent=gene-AD853_RS12295;Dbxref=GenBank:WP_038824327.1;Name=WP_038824327.1;Ontology_term=GO:0006281,GO:0006355,GO:0003700;gbkey=CDS;gene=ada;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=DNA repair|0006281||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016604261.1;locus_tag=AD853_RS12295;product=bifunctional DNA-binding transcriptional regulator/O6-methylguanine-DNA methyltransferase Ada;protein_id=WP_038824327.1;transl_table=11 NZ_CPUY01000012.1 RefSeq gene 82065 82553 . + . ID=gene-AD853_RS12300;Name=trmL;gbkey=Gene;gene=trmL;gene_biotype=protein_coding;locus_tag=AD853_RS12300;old_locus_tag=ERS008462_02485 NZ_CPUY01000012.1 Protein Homology CDS 82065 82553 . + 0 ID=cds-WP_002208973.1;Parent=gene-AD853_RS12300;Dbxref=GenBank:WP_002208973.1;Name=WP_002208973.1;Ontology_term=GO:0001510,GO:0008173;gbkey=CDS;gene=trmL;go_function=RNA methyltransferase activity|0008173||IEA;go_process=RNA methylation|0001510||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004705053.1;locus_tag=AD853_RS12300;product=tRNA (uridine(34)/cytosine(34)/5-carboxymethylaminomethyluridine(34)-2'-O)-methyltransferase TrmL;protein_id=WP_002208973.1;transl_table=11 NZ_CPUY01000012.1 RefSeq gene 82676 83497 . - . ID=gene-AD853_RS12305;Name=cysE;gbkey=Gene;gene=cysE;gene_biotype=protein_coding;locus_tag=AD853_RS12305;old_locus_tag=ERS008462_02486 NZ_CPUY01000012.1 Protein Homology CDS 82676 83497 . - 0 ID=cds-WP_002208974.1;Parent=gene-AD853_RS12305;Dbxref=GenBank:WP_002208974.1;Name=WP_002208974.1;Ontology_term=GO:0006535,GO:0009001;gbkey=CDS;gene=cysE;go_function=serine O-acetyltransferase activity|0009001||IEA;go_process=cysteine biosynthetic process from serine|0006535||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815007.1;locus_tag=AD853_RS12305;product=serine O-acetyltransferase;protein_id=WP_002208974.1;transl_table=11 NZ_CPUY01000012.1 RefSeq gene 83763 84782 . - . ID=gene-AD853_RS12315;Name=gpsA;gbkey=Gene;gene=gpsA;gene_biotype=protein_coding;locus_tag=AD853_RS12315;old_locus_tag=ERS008462_02487 NZ_CPUY01000012.1 Protein Homology CDS 83763 84782 . - 0 ID=cds-WP_002208975.1;Parent=gene-AD853_RS12315;Dbxref=GenBank:WP_002208975.1;Name=WP_002208975.1;Ontology_term=GO:0006072,GO:0047952;gbkey=CDS;gene=gpsA;go_function=glycerol-3-phosphate dehydrogenase [NAD(P)+] activity|0047952||IEA;go_process=glycerol-3-phosphate metabolic process|0006072||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002361564.1;locus_tag=AD853_RS12315;product=NAD(P)H-dependent glycerol-3-phosphate dehydrogenase;protein_id=WP_002208975.1;transl_table=11 NZ_CPUY01000012.1 RefSeq gene 84782 85258 . - . ID=gene-AD853_RS12320;Name=secB;gbkey=Gene;gene=secB;gene_biotype=protein_coding;locus_tag=AD853_RS12320;old_locus_tag=ERS008462_02488 NZ_CPUY01000012.1 Protein Homology CDS 84782 85258 . - 0 ID=cds-WP_002208976.1;Parent=gene-AD853_RS12320;Dbxref=GenBank:WP_002208976.1;Name=WP_002208976.1;gbkey=CDS;gene=secB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014913761.1;locus_tag=AD853_RS12320;product=protein-export chaperone SecB;protein_id=WP_002208976.1;transl_table=11 NZ_CPUY01000012.1 RefSeq gene 85346 85594 . - . ID=gene-AD853_RS12325;Name=grxC;gbkey=Gene;gene=grxC;gene_biotype=protein_coding;locus_tag=AD853_RS12325;old_locus_tag=ERS008462_02489 NZ_CPUY01000012.1 Protein Homology CDS 85346 85594 . - 0 ID=cds-WP_002208977.1;Parent=gene-AD853_RS12325;Dbxref=GenBank:WP_002208977.1;Name=WP_002208977.1;gbkey=CDS;gene=grxC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016266853.1;locus_tag=AD853_RS12325;product=glutaredoxin 3;protein_id=WP_002208977.1;transl_table=11 NZ_CPUY01000012.1 RefSeq gene 85713 86147 . - . ID=gene-AD853_RS12330;Name=AD853_RS12330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS12330;old_locus_tag=ERS008462_02490 NZ_CPUY01000012.1 Protein Homology CDS 85713 86147 . - 0 ID=cds-WP_002208978.1;Parent=gene-AD853_RS12330;Dbxref=GenBank:WP_002208978.1;Name=WP_002208978.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005273648.1;locus_tag=AD853_RS12330;product=rhodanese-like domain-containing protein;protein_id=WP_002208978.1;transl_table=11 NZ_CPUY01000012.1 RefSeq gene 86544 88091 . + . ID=gene-AD853_RS12335;Name=gpmM;gbkey=Gene;gene=gpmM;gene_biotype=protein_coding;gene_synonym=pgmI;locus_tag=AD853_RS12335;old_locus_tag=ERS008462_02491 NZ_CPUY01000012.1 Protein Homology CDS 86544 88091 . + 0 ID=cds-WP_011191453.1;Parent=gene-AD853_RS12335;Dbxref=GenBank:WP_011191453.1;Name=WP_011191453.1;Ontology_term=GO:0006007,GO:0004619;gbkey=CDS;gene=gpmM;go_function=phosphoglycerate mutase activity|0004619||IEA;go_process=glucose catabolic process|0006007||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229416.1;locus_tag=AD853_RS12335;product=2%2C3-bisphosphoglycerate-independent phosphoglycerate mutase;protein_id=WP_011191453.1;transl_table=11 NZ_CPUY01000012.1 RefSeq gene 88176 89471 . + . ID=gene-AD853_RS12340;Name=envC;gbkey=Gene;gene=envC;gene_biotype=protein_coding;locus_tag=AD853_RS12340;old_locus_tag=ERS008462_02492 NZ_CPUY01000012.1 Protein Homology CDS 88176 89471 . + 0 ID=cds-WP_404975824.1;Parent=gene-AD853_RS12340;Dbxref=GenBank:WP_404975824.1;Name=WP_404975824.1;gbkey=CDS;gene=envC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004876924.1;locus_tag=AD853_RS12340;product=murein hydrolase activator EnvC;protein_id=WP_404975824.1;transl_table=11 NZ_CPUY01000012.1 RefSeq gene 89495 90505 . + . ID=gene-AD853_RS12345;Name=AD853_RS12345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS12345;old_locus_tag=ERS008462_02493 NZ_CPUY01000012.1 Protein Homology CDS 89495 90505 . + 0 ID=cds-WP_038824329.1;Parent=gene-AD853_RS12345;Dbxref=GenBank:WP_038824329.1;Name=WP_038824329.1;Ontology_term=GO:0005975,GO:0016810;gbkey=CDS;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011191452.1;locus_tag=AD853_RS12345;product=divergent polysaccharide deacetylase family protein;protein_id=WP_038824329.1;transl_table=11 NZ_CPUY01000012.1 RefSeq gene 90662 91687 . - . ID=gene-AD853_RS12350;Name=tdh;gbkey=Gene;gene=tdh;gene_biotype=protein_coding;locus_tag=AD853_RS12350;old_locus_tag=ERS008462_02494 NZ_CPUY01000012.1 Protein Homology CDS 90662 91687 . - 0 ID=cds-WP_038824330.1;Parent=gene-AD853_RS12350;Dbxref=GenBank:WP_038824330.1;Name=WP_038824330.1;Ontology_term=GO:0006567,GO:0008743;gbkey=CDS;gene=tdh;go_function=L-threonine 3-dehydrogenase activity|0008743||IEA;go_process=L-threonine catabolic process|0006567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120462.1;locus_tag=AD853_RS12350;product=L-threonine 3-dehydrogenase;protein_id=WP_038824330.1;transl_table=11 NZ_CPUY01000012.1 RefSeq gene 91697 92908 . - . ID=gene-AD853_RS12355;Name=AD853_RS12355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS12355;old_locus_tag=ERS008462_02495 NZ_CPUY01000012.1 Protein Homology CDS 91697 92908 . - 0 ID=cds-WP_002208982.1;Parent=gene-AD853_RS12355;Dbxref=GenBank:WP_002208982.1;Name=WP_002208982.1;Ontology_term=GO:0009058,GO:0008890,GO:0030170;gbkey=CDS;go_function=glycine C-acetyltransferase activity|0008890||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012104268.1;locus_tag=AD853_RS12355;product=glycine C-acetyltransferase;protein_id=WP_002208982.1;transl_table=11 NZ_CPUY01000012.1 RefSeq gene 93154 94086 . + . ID=gene-AD853_RS12360;Name=rfaD;gbkey=Gene;gene=rfaD;gene_biotype=protein_coding;locus_tag=AD853_RS12360;old_locus_tag=ERS008462_02496 NZ_CPUY01000012.1 Protein Homology CDS 93154 94086 . + 0 ID=cds-WP_002208983.1;Parent=gene-AD853_RS12360;Dbxref=GenBank:WP_002208983.1;Name=WP_002208983.1;Ontology_term=GO:0005975,GO:0008712;gbkey=CDS;gene=rfaD;go_function=ADP-glyceromanno-heptose 6-epimerase activity|0008712||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019080305.1;locus_tag=AD853_RS12360;product=ADP-glyceromanno-heptose 6-epimerase;protein_id=WP_002208983.1;transl_table=11 NZ_CPUY01000012.1 RefSeq gene 94117 95181 . + . ID=gene-AD853_RS12365;Name=rfaF;gbkey=Gene;gene=rfaF;gene_biotype=protein_coding;locus_tag=AD853_RS12365;old_locus_tag=ERS008462_02497 NZ_CPUY01000012.1 Protein Homology CDS 94117 95181 . + 0 ID=cds-WP_011191450.1;Parent=gene-AD853_RS12365;Dbxref=GenBank:WP_011191450.1;Name=WP_011191450.1;Ontology_term=GO:0009103,GO:0016757;gbkey=CDS;gene=rfaF;go_function=glycosyltransferase activity|0016757||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208984.1;locus_tag=AD853_RS12365;product=ADP-heptose--LPS heptosyltransferase RfaF;protein_id=WP_011191450.1;transl_table=11 NZ_CPUY01000012.1 RefSeq gene 95181 96146 . + . ID=gene-AD853_RS12370;Name=rfaC;gbkey=Gene;gene=rfaC;gene_biotype=protein_coding;locus_tag=AD853_RS12370;old_locus_tag=ERS008462_02498 NZ_CPUY01000012.1 Protein Homology CDS 95181 96146 . + 0 ID=cds-WP_002208985.1;Parent=gene-AD853_RS12370;Dbxref=GenBank:WP_002208985.1;Name=WP_002208985.1;Ontology_term=GO:0009244,GO:0008920;gbkey=CDS;gene=rfaC;go_function=lipopolysaccharide heptosyltransferase activity|0008920||IEA;go_process=lipopolysaccharide core region biosynthetic process|0009244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208985.1;locus_tag=AD853_RS12370;product=lipopolysaccharide heptosyltransferase RfaC;protein_id=WP_002208985.1;transl_table=11 NZ_CPUY01000012.1 RefSeq gene 96566 97843 . + . ID=gene-AD853_RS12375;Name=waaA;gbkey=Gene;gene=waaA;gene_biotype=protein_coding;locus_tag=AD853_RS12375;old_locus_tag=ERS008462_02499 NZ_CPUY01000012.1 Protein Homology CDS 96566 97843 . + 0 ID=cds-WP_002208986.1;Parent=gene-AD853_RS12375;Dbxref=GenBank:WP_002208986.1;Name=WP_002208986.1;Ontology_term=GO:0016740;gbkey=CDS;gene=waaA;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013648993.1;locus_tag=AD853_RS12375;product=lipid IV(A) 3-deoxy-D-manno-octulosonic acid transferase;protein_id=WP_002208986.1;transl_table=11 NZ_CPUY01000012.1 RefSeq gene 97844 98626 . + . ID=gene-AD853_RS12380;Name=AD853_RS12380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS12380;old_locus_tag=ERS008462_02500 NZ_CPUY01000012.1 Protein Homology CDS 97844 98626 . + 0 ID=cds-WP_002208987.1;Parent=gene-AD853_RS12380;Dbxref=GenBank:WP_002208987.1;Name=WP_002208987.1;Ontology_term=GO:0009101,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=glycoprotein biosynthetic process|0009101||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208987.1;locus_tag=AD853_RS12380;product=glycosyltransferase family 2 protein;protein_id=WP_002208987.1;transl_table=11 NZ_CPUY01000012.1 RefSeq gene 98623 99102 . + . ID=gene-AD853_RS12385;Name=coaD;gbkey=Gene;gene=coaD;gene_biotype=protein_coding;locus_tag=AD853_RS12385;old_locus_tag=ERS008462_02501 NZ_CPUY01000012.1 Protein Homology CDS 98623 99102 . + 0 ID=cds-WP_012104267.1;Parent=gene-AD853_RS12385;Dbxref=GenBank:WP_012104267.1;Name=WP_012104267.1;Ontology_term=GO:0015937,GO:0004595;gbkey=CDS;gene=coaD;go_function=pantetheine-phosphate adenylyltransferase activity|0004595||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012104267.1;locus_tag=AD853_RS12385;product=pantetheine-phosphate adenylyltransferase;protein_id=WP_012104267.1;transl_table=11 NZ_CPUY01000012.1 RefSeq gene 99108 99917 . - . ID=gene-AD853_RS12390;Name=mutM;gbkey=Gene;gene=mutM;gene_biotype=protein_coding;locus_tag=AD853_RS12390;old_locus_tag=ERS008462_02502 NZ_CPUY01000012.1 Protein Homology CDS 99108 99917 . - 0 ID=cds-WP_038824331.1;Parent=gene-AD853_RS12390;Dbxref=GenBank:WP_038824331.1;Name=WP_038824331.1;Ontology_term=GO:0006281,GO:0006284,GO:0003676,GO:0003684,GO:0003906,GO:0008270,GO:0008534,GO:0016799,GO:0019104;gbkey=CDS;gene=mutM;go_function=nucleic acid binding|0003676||IEA,damaged DNA binding|0003684||IEA,DNA-(apurinic or apyrimidinic site) endonuclease activity|0003906||IEA,zinc ion binding|0008270||IEA,oxidized purine nucleobase lesion DNA N-glycosylase activity|0008534||IEA,hydrolase activity%2C hydrolyzing N-glycosyl compounds|0016799||IEA,DNA N-glycosylase activity|0019104||IEA;go_process=DNA repair|0006281||IEA,base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004710476.1;locus_tag=AD853_RS12390;product=bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase;protein_id=WP_038824331.1;transl_table=11 NZ_CPUY01000012.1 RefSeq gene 100000 100167 . - . ID=gene-AD853_RS12395;Name=rpmG;gbkey=Gene;gene=rpmG;gene_biotype=protein_coding;locus_tag=AD853_RS12395;old_locus_tag=ERS008462_02503 NZ_CPUY01000012.1 Protein Homology CDS 100000 100167 . - 0 ID=cds-WP_002208990.1;Parent=gene-AD853_RS12395;Dbxref=GenBank:WP_002208990.1;Name=WP_002208990.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmG;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010847629.1;locus_tag=AD853_RS12395;product=50S ribosomal protein L33;protein_id=WP_002208990.1;transl_table=11 NZ_CPUY01000012.1 RefSeq gene 100179 100415 . - . ID=gene-AD853_RS12400;Name=rpmB;gbkey=Gene;gene=rpmB;gene_biotype=protein_coding;locus_tag=AD853_RS12400;old_locus_tag=ERS008462_02504 NZ_CPUY01000012.1 Protein Homology CDS 100179 100415 . - 0 ID=cds-WP_002208991.1;Parent=gene-AD853_RS12400;Dbxref=GenBank:WP_002208991.1;Name=WP_002208991.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmB;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008457442.1;locus_tag=AD853_RS12400;product=50S ribosomal protein L28;protein_id=WP_002208991.1;transl_table=11 NZ_CPUY01000012.1 RefSeq gene 100678 101346 . - . ID=gene-AD853_RS12405;Name=radC;gbkey=Gene;gene=radC;gene_biotype=protein_coding;locus_tag=AD853_RS12405;old_locus_tag=ERS008462_02505 NZ_CPUY01000012.1 Protein Homology CDS 100678 101346 . - 0 ID=cds-WP_002208992.1;Parent=gene-AD853_RS12405;Dbxref=GenBank:WP_002208992.1;Name=WP_002208992.1;gbkey=CDS;gene=radC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208992.1;locus_tag=AD853_RS12405;product=RadC family protein;protein_id=WP_002208992.1;transl_table=11 NZ_CPUY01000012.1 RefSeq gene 101540 102757 . + . ID=gene-AD853_RS12410;Name=coaBC;gbkey=Gene;gene=coaBC;gene_biotype=protein_coding;locus_tag=AD853_RS12410;old_locus_tag=ERS008462_02506 NZ_CPUY01000012.1 Protein Homology CDS 101540 102757 . + 0 ID=cds-WP_038824339.1;Parent=gene-AD853_RS12410;Dbxref=GenBank:WP_038824339.1;Name=WP_038824339.1;Ontology_term=GO:0015937,GO:0015941,GO:0004632,GO:0004633,GO:0010181;gbkey=CDS;gene=coaBC;go_function=phosphopantothenate--cysteine ligase activity|0004632||IEA,phosphopantothenoylcysteine decarboxylase activity|0004633||IEA,FMN binding|0010181||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA,pantothenate catabolic process|0015941||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005273680.1;locus_tag=AD853_RS12410;product=bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC;protein_id=WP_038824339.1;transl_table=11 NZ_CPUY01000012.1 RefSeq gene 102735 103193 . + . ID=gene-AD853_RS12415;Name=dut;gbkey=Gene;gene=dut;gene_biotype=protein_coding;locus_tag=AD853_RS12415;old_locus_tag=ERS008462_02507 NZ_CPUY01000012.1 Protein Homology CDS 102735 103193 . + 0 ID=cds-WP_038824333.1;Parent=gene-AD853_RS12415;Dbxref=GenBank:WP_038824333.1;Name=WP_038824333.1;Ontology_term=GO:0006226,GO:0046081,GO:0000287,GO:0004170;gbkey=CDS;gene=dut;go_function=magnesium ion binding|0000287||IEA,dUTP diphosphatase activity|0004170||IEA;go_process=dUMP biosynthetic process|0006226||IEA,dUTP catabolic process|0046081||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000976070.1;locus_tag=AD853_RS12415;product=dUTP diphosphatase;protein_id=WP_038824333.1;transl_table=11 NZ_CPUY01000012.1 RefSeq pseudogene 103315 103907 . + . ID=gene-AD853_RS12420;Name=slmA;gbkey=Gene;gene=slmA;gene_biotype=pseudogene;locus_tag=AD853_RS12420;old_locus_tag=ERS008462_02508;pseudo=true NZ_CPUY01000012.1 Protein Homology CDS 103315 103907 . + 0 ID=cds-AD853_RS12420;Parent=gene-AD853_RS12420;Note=frameshifted;Ontology_term=GO:0010974,GO:0003677;gbkey=CDS;gene=slmA;go_function=DNA binding|0003677||IEA;go_process=negative regulation of division septum assembly|0010974||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011148925.1;locus_tag=AD853_RS12420;product=nucleoid occlusion factor SlmA;pseudo=true;transl_table=11 NZ_CPUY01000012.1 RefSeq gene 104042 104689 . - . ID=gene-AD853_RS12425;Name=pyrE;gbkey=Gene;gene=pyrE;gene_biotype=protein_coding;locus_tag=AD853_RS12425;old_locus_tag=ERS008462_02509 NZ_CPUY01000012.1 Protein Homology CDS 104042 104689 . - 0 ID=cds-WP_038824335.1;Parent=gene-AD853_RS12425;Dbxref=GenBank:WP_038824335.1;Name=WP_038824335.1;Ontology_term=GO:0009220,GO:0004588;gbkey=CDS;gene=pyrE;go_function=orotate phosphoribosyltransferase activity|0004588||IEA;go_process=pyrimidine ribonucleotide biosynthetic process|0009220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208996.1;locus_tag=AD853_RS12425;product=orotate phosphoribosyltransferase;protein_id=WP_038824335.1;transl_table=11 NZ_CPUY01000012.1 RefSeq gene 104856 105572 . - . ID=gene-AD853_RS12430;Name=rph;gbkey=Gene;gene=rph;gene_biotype=protein_coding;locus_tag=AD853_RS12430;old_locus_tag=ERS008462_02510 NZ_CPUY01000012.1 Protein Homology CDS 104856 105572 . - 0 ID=cds-WP_002208997.1;Parent=gene-AD853_RS12430;Dbxref=GenBank:WP_002208997.1;Name=WP_002208997.1;Ontology_term=GO:0008033,GO:0000049,GO:0009022;gbkey=CDS;gene=rph;go_function=tRNA binding|0000049||IEA,tRNA nucleotidyltransferase activity|0009022||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208997.1;locus_tag=AD853_RS12430;product=ribonuclease PH;protein_id=WP_002208997.1;transl_table=11 NZ_CPUY01000012.1 RefSeq gene 105699 106562 . + . ID=gene-AD853_RS12435;Name=AD853_RS12435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS12435;old_locus_tag=ERS008462_02511 NZ_CPUY01000012.1 Protein Homology CDS 105699 106562 . + 0 ID=cds-WP_002208998.1;Parent=gene-AD853_RS12435;Dbxref=GenBank:WP_002208998.1;Name=WP_002208998.1;Ontology_term=GO:0016788;gbkey=CDS;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122606.1;locus_tag=AD853_RS12435;product=YicC/YloC family endoribonuclease;protein_id=WP_002208998.1;transl_table=11 NZ_CPUY01000012.1 RefSeq gene 107083 107700 . + . ID=gene-AD853_RS12440;Name=AD853_RS12440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS12440;old_locus_tag=ERS008462_02512 NZ_CPUY01000012.1 Protein Homology CDS 107083 107700 . + 0 ID=cds-WP_011191448.1;Parent=gene-AD853_RS12440;Dbxref=GenBank:WP_011191448.1;Name=WP_011191448.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005165881.1;locus_tag=AD853_RS12440;product=trimeric intracellular cation channel family protein;protein_id=WP_011191448.1;transl_table=11 NZ_CPUY01000012.1 RefSeq gene 107720 109423 . - . ID=gene-AD853_RS12445;Name=ligB;gbkey=Gene;gene=ligB;gene_biotype=protein_coding;locus_tag=AD853_RS12445;old_locus_tag=ERS008462_02513 NZ_CPUY01000012.1 Protein Homology CDS 107720 109423 . - 0 ID=cds-WP_002215674.1;Parent=gene-AD853_RS12445;Dbxref=GenBank:WP_002215674.1;Name=WP_002215674.1;Ontology_term=GO:0006260,GO:0006281,GO:0003911;gbkey=CDS;gene=ligB;go_function=DNA ligase (NAD+) activity|0003911||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002221001.1;locus_tag=AD853_RS12445;product=NAD-dependent DNA ligase LigB;protein_id=WP_002215674.1;transl_table=11 NZ_CPUY01000012.1 RefSeq gene 109824 110447 . + . ID=gene-AD853_RS12450;Name=gmk;gbkey=Gene;gene=gmk;gene_biotype=protein_coding;locus_tag=AD853_RS12450;old_locus_tag=ERS008462_02514 NZ_CPUY01000012.1 Protein Homology CDS 109824 110447 . + 0 ID=cds-WP_002209000.1;Parent=gene-AD853_RS12450;Dbxref=GenBank:WP_002209000.1;Name=WP_002209000.1;Ontology_term=GO:0006163,GO:0004385;gbkey=CDS;gene=gmk;go_function=GMP kinase activity|0004385||IEA;go_process=purine nucleotide metabolic process|0006163||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000046969.1;locus_tag=AD853_RS12450;product=guanylate kinase;protein_id=WP_002209000.1;transl_table=11 NZ_CPUY01000012.1 RefSeq gene 110502 110777 . + . ID=gene-AD853_RS12455;Name=rpoZ;gbkey=Gene;gene=rpoZ;gene_biotype=protein_coding;locus_tag=AD853_RS12455;old_locus_tag=ERS008462_02515 NZ_CPUY01000012.1 Protein Homology CDS 110502 110777 . + 0 ID=cds-WP_004392061.1;Parent=gene-AD853_RS12455;Dbxref=GenBank:WP_004392061.1;Name=WP_004392061.1;Ontology_term=GO:0006351,GO:0003899;gbkey=CDS;gene=rpoZ;go_function=DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013511051.1;locus_tag=AD853_RS12455;product=DNA-directed RNA polymerase subunit omega;protein_id=WP_004392061.1;transl_table=11 NZ_CPUY01000012.1 RefSeq gene 110797 112905 . + . ID=gene-AD853_RS12460;Name=spoT;gbkey=Gene;gene=spoT;gene_biotype=protein_coding;locus_tag=AD853_RS12460;old_locus_tag=ERS008462_02516 NZ_CPUY01000012.1 Protein Homology CDS 110797 112905 . + 0 ID=cds-WP_002209002.1;Parent=gene-AD853_RS12460;Dbxref=GenBank:WP_002209002.1;Name=WP_002209002.1;Ontology_term=GO:0015969,GO:0008728,GO:0008893;gbkey=CDS;gene=spoT;go_function=GTP diphosphokinase activity|0008728||IEA,guanosine-3'%2C5'-bis(diphosphate) 3'-diphosphatase activity|0008893||IEA;go_process=guanosine tetraphosphate metabolic process|0015969||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462642.1;locus_tag=AD853_RS12460;product=bifunctional GTP diphosphokinase/guanosine-3'%2C5'-bis pyrophosphate 3'-pyrophosphohydrolase;protein_id=WP_002209002.1;transl_table=11 NZ_CPUY01000012.1 RefSeq gene 112911 113603 . + . ID=gene-AD853_RS12465;Name=trmH;gbkey=Gene;gene=trmH;gene_biotype=protein_coding;locus_tag=AD853_RS12465;old_locus_tag=ERS008462_02517 NZ_CPUY01000012.1 Protein Homology CDS 112911 113603 . + 0 ID=cds-WP_071990087.1;Parent=gene-AD853_RS12465;Dbxref=GenBank:WP_071990087.1;Name=WP_071990087.1;Ontology_term=GO:0030488,GO:0141100;gbkey=CDS;gene=trmH;go_function=tRNA (guanine(18)-2'-O)-methyltransferase activity|0141100||IEA;go_process=tRNA methylation|0030488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209003.1;locus_tag=AD853_RS12465;product=tRNA (guanosine(18)-2'-O)-methyltransferase TrmH;protein_id=WP_071990087.1;transl_table=11 NZ_CPUY01000012.1 RefSeq gene 113604 115685 . + . ID=gene-AD853_RS12470;Name=recG;gbkey=Gene;gene=recG;gene_biotype=protein_coding;locus_tag=AD853_RS12470;old_locus_tag=ERS008462_02518 NZ_CPUY01000012.1 Protein Homology CDS 113604 115685 . + 0 ID=cds-WP_002209004.1;Parent=gene-AD853_RS12470;Dbxref=GenBank:WP_002209004.1;Name=WP_002209004.1;Ontology_term=GO:0006281,GO:0006310,GO:0003676,GO:0003678,GO:0005524;gbkey=CDS;gene=recG;go_function=nucleic acid binding|0003676||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209004.1;locus_tag=AD853_RS12470;product=ATP-dependent DNA helicase RecG;protein_id=WP_002209004.1;transl_table=11 NZ_CPUY01000012.1 RefSeq gene 115877 115969 . + . ID=gene-AD853_RS21590;Name=AD853_RS21590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS21590 NZ_CPUY01000012.1 Protein Homology CDS 115877 115969 . + 0 ID=cds-WP_071529784.1;Parent=gene-AD853_RS21590;Dbxref=GenBank:WP_071529784.1;Name=WP_071529784.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002430096.1;locus_tag=AD853_RS21590;product=gluconate 5-dehydrogenase;protein_id=WP_071529784.1;transl_table=11 NZ_CPUY01000012.1 RefSeq gene 116051 117265 . - . ID=gene-AD853_RS12475;Name=gltS;gbkey=Gene;gene=gltS;gene_biotype=protein_coding;locus_tag=AD853_RS12475;old_locus_tag=ERS008462_02519 NZ_CPUY01000012.1 Protein Homology CDS 116051 117265 . - 0 ID=cds-WP_002209005.1;Parent=gene-AD853_RS12475;Dbxref=GenBank:WP_002209005.1;Name=WP_002209005.1;Ontology_term=GO:0015813,GO:0015501,GO:0016020;gbkey=CDS;gene=gltS;go_component=membrane|0016020||IEA;go_function=glutamate:sodium symporter activity|0015501||IEA;go_process=L-glutamate transmembrane transport|0015813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304777.1;locus_tag=AD853_RS12475;product=sodium/glutamate symporter;protein_id=WP_002209005.1;transl_table=11 NZ_CPUY01000012.1 RefSeq gene 117503 118888 . + . ID=gene-AD853_RS12480;Name=AD853_RS12480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS12480;old_locus_tag=ERS008462_02520 NZ_CPUY01000012.1 Protein Homology CDS 117503 118888 . + 0 ID=cds-WP_011191446.1;Parent=gene-AD853_RS12480;Dbxref=GenBank:WP_011191446.1;Name=WP_011191446.1;Ontology_term=GO:0015851,GO:0055085,GO:0015205,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=nucleobase transmembrane transporter activity|0015205||IEA,transmembrane transporter activity|0022857||IEA;go_process=nucleobase transport|0015851||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014609245.1;locus_tag=AD853_RS12480;product=uracil-xanthine permease family protein;protein_id=WP_011191446.1;transl_table=11 NZ_CPUY01000012.1 RefSeq gene 119035 120744 . + . ID=gene-AD853_RS12485;Name=AD853_RS12485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS12485;old_locus_tag=ERS008462_02521 NZ_CPUY01000012.1 Protein Homology CDS 119035 120744 . + 0 ID=cds-WP_002209007.1;Parent=gene-AD853_RS12485;Dbxref=GenBank:WP_002209007.1;Name=WP_002209007.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209007.1;locus_tag=AD853_RS12485;product=AsmA family protein;protein_id=WP_002209007.1;transl_table=11 NZ_CPUY01000012.1 RefSeq gene 120879 121802 . - . ID=gene-AD853_RS12490;Name=fabY;gbkey=Gene;gene=fabY;gene_biotype=protein_coding;gene_synonym=yiiD;locus_tag=AD853_RS12490;old_locus_tag=ERS008462_02522 NZ_CPUY01000012.1 Protein Homology CDS 120879 121802 . - 0 ID=cds-WP_002209008.1;Parent=gene-AD853_RS12490;Dbxref=GenBank:WP_002209008.1;Name=WP_002209008.1;gbkey=CDS;gene=fabY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209008.1;locus_tag=AD853_RS12490;product=fatty acid biosynthesis protein FabY;protein_id=WP_002209008.1;transl_table=11 NZ_CPUY01000012.1 RefSeq gene 121988 122425 . - . ID=gene-AD853_RS12495;Name=dtd;gbkey=Gene;gene=dtd;gene_biotype=protein_coding;locus_tag=AD853_RS12495;old_locus_tag=ERS008462_02523 NZ_CPUY01000012.1 Protein Homology CDS 121988 122425 . - 0 ID=cds-WP_002209009.1;Parent=gene-AD853_RS12495;Dbxref=GenBank:WP_002209009.1;Name=WP_002209009.1;Ontology_term=GO:0008152,GO:0004045;gbkey=CDS;gene=dtd;go_function=peptidyl-tRNA hydrolase activity|0004045||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012147545.1;locus_tag=AD853_RS12495;product=D-aminoacyl-tRNA deacylase;protein_id=WP_002209009.1;transl_table=11 NZ_CPUY01000012.1 RefSeq gene 122432 123316 . - . ID=gene-AD853_RS12500;Name=AD853_RS12500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS12500;old_locus_tag=ERS008462_02524 NZ_CPUY01000012.1 Protein Homology CDS 122432 123316 . - 0 ID=cds-WP_011191445.1;Parent=gene-AD853_RS12500;Dbxref=GenBank:WP_011191445.1;Name=WP_011191445.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011191445.1;locus_tag=AD853_RS12500;product=virulence factor BrkB family protein;protein_id=WP_011191445.1;transl_table=11 NZ_CPUY01000012.1 RefSeq gene 123413 124003 . - . ID=gene-AD853_RS12505;Name=yihX;gbkey=Gene;gene=yihX;gene_biotype=protein_coding;locus_tag=AD853_RS12505;old_locus_tag=ERS008462_02525 NZ_CPUY01000012.1 Protein Homology CDS 123413 124003 . - 0 ID=cds-WP_038825156.1;Parent=gene-AD853_RS12505;Dbxref=GenBank:WP_038825156.1;Name=WP_038825156.1;gbkey=CDS;gene=yihX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209011.1;locus_tag=AD853_RS12505;product=glucose-1-phosphatase;protein_id=WP_038825156.1;transl_table=11 NZ_CPUY01000012.1 RefSeq gene 124331 126154 . - . ID=gene-AD853_RS12510;Name=typA;gbkey=Gene;gene=typA;gene_biotype=protein_coding;locus_tag=AD853_RS12510;old_locus_tag=ERS008462_02526 NZ_CPUY01000012.1 Protein Homology CDS 124331 126154 . - 0 ID=cds-WP_002217380.1;Parent=gene-AD853_RS12510;Dbxref=GenBank:WP_002217380.1;Name=WP_002217380.1;gbkey=CDS;gene=typA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002217380.1;locus_tag=AD853_RS12510;product=ribosome-dependent GTPase TypA;protein_id=WP_002217380.1;transl_table=11 NZ_CPUY01000012.1 RefSeq gene 126716 128125 . + . ID=gene-AD853_RS12520;Name=glnA;gbkey=Gene;gene=glnA;gene_biotype=protein_coding;locus_tag=AD853_RS12520;old_locus_tag=ERS008462_02527 NZ_CPUY01000012.1 Protein Homology CDS 126716 128125 . + 0 ID=cds-WP_002213150.1;Parent=gene-AD853_RS12520;Dbxref=GenBank:WP_002213150.1;Name=WP_002213150.1;Ontology_term=GO:0006542,GO:0008152,GO:0004356;gbkey=CDS;gene=glnA;go_function=glutamine synthetase activity|0004356||IEA;go_process=glutamine biosynthetic process|0006542||IEA,metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312819.1;locus_tag=AD853_RS12520;product=glutamate--ammonia ligase;protein_id=WP_002213150.1;transl_table=11 NZ_CPUY01000012.1 RefSeq gene 128378 129427 . + . ID=gene-AD853_RS12525;Name=glnL;gbkey=Gene;gene=glnL;gene_biotype=protein_coding;locus_tag=AD853_RS12525;old_locus_tag=ERS008462_02528 NZ_CPUY01000012.1 Protein Homology CDS 128378 129427 . + 0 ID=cds-WP_002213151.1;Parent=gene-AD853_RS12525;Dbxref=GenBank:WP_002213151.1;Name=WP_002213151.1;Ontology_term=GO:0006355,GO:0007165,GO:0016310,GO:0000155;gbkey=CDS;gene=glnL;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224326.1;locus_tag=AD853_RS12525;product=nitrogen regulation protein NR(II);protein_id=WP_002213151.1;transl_table=11 NZ_CPUY01000012.1 RefSeq gene 129435 130847 . + . ID=gene-AD853_RS12530;Name=glnG;gbkey=Gene;gene=glnG;gene_biotype=protein_coding;locus_tag=AD853_RS12530;old_locus_tag=ERS008462_02529 NZ_CPUY01000012.1 Protein Homology CDS 129435 130847 . + 0 ID=cds-WP_011191444.1;Parent=gene-AD853_RS12530;Dbxref=GenBank:WP_011191444.1;Name=WP_011191444.1;Ontology_term=GO:0006355,GO:0043565;gbkey=CDS;gene=glnG;go_function=sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133942.1;locus_tag=AD853_RS12530;product=nitrogen regulation protein NR(I);protein_id=WP_011191444.1;transl_table=11 NZ_CPUY01000012.1 RefSeq gene 130901 132274 . - . ID=gene-AD853_RS12535;Name=hemN;gbkey=Gene;gene=hemN;gene_biotype=protein_coding;locus_tag=AD853_RS12535;old_locus_tag=ERS008462_02530 NZ_CPUY01000012.1 Protein Homology CDS 130901 132274 . - 0 ID=cds-WP_002213155.1;Parent=gene-AD853_RS12535;Dbxref=GenBank:WP_002213155.1;Name=WP_002213155.1;Ontology_term=GO:0006779,GO:0004109,GO:0005737;gbkey=CDS;gene=hemN;go_component=cytoplasm|0005737||IEA;go_function=coproporphyrinogen oxidase activity|0004109||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312816.2;locus_tag=AD853_RS12535;product=oxygen-independent coproporphyrinogen III oxidase;protein_id=WP_002213155.1;transl_table=11 NZ_CPUY01000012.1 RefSeq gene 132461 133027 . - . ID=gene-AD853_RS12540;Name=yihI;gbkey=Gene;gene=yihI;gene_biotype=protein_coding;locus_tag=AD853_RS12540;old_locus_tag=ERS008462_02531 NZ_CPUY01000012.1 Protein Homology CDS 132461 133027 . - 0 ID=cds-WP_002213158.1;Parent=gene-AD853_RS12540;Dbxref=GenBank:WP_002213158.1;Name=WP_002213158.1;gbkey=CDS;gene=yihI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005191191.1;locus_tag=AD853_RS12540;product=Der GTPase-activating protein YihI;protein_id=WP_002213158.1;transl_table=11 NZ_CPUY01000012.1 RefSeq gene 133772 134422 . + . ID=gene-AD853_RS12545;Name=yihA;gbkey=Gene;gene=yihA;gene_biotype=protein_coding;locus_tag=AD853_RS12545;old_locus_tag=ERS008462_02534 NZ_CPUY01000012.1 Protein Homology CDS 133772 134422 . + 0 ID=cds-WP_002213160.1;Parent=gene-AD853_RS12545;Dbxref=GenBank:WP_002213160.1;Name=WP_002213160.1;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0043022,GO:0005737;gbkey=CDS;gene=yihA;go_component=cytoplasm|0005737||IEA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,ribosome binding|0043022||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002213160.1;locus_tag=AD853_RS12545;product=ribosome biogenesis GTP-binding protein YihA/YsxC;protein_id=WP_002213160.1;transl_table=11 NZ_CPUY01000012.1 RefSeq pseudogene 134609 134653 . - . ID=gene-AD853_RS22745;Name=spfP;gbkey=Gene;gene=spfP;gene_biotype=pseudogene;locus_tag=AD853_RS22745;partial=true;pseudo=true;start_range=.,134609 NZ_CPUY01000012.1 Protein Homology CDS 134609 134653 . - 0 ID=cds-AD853_RS22745;Parent=gene-AD853_RS22745;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;gene=spfP;inference=COORDINATES: similar to AA sequence:RefSeq:YP_013606034.1;locus_tag=AD853_RS22745;partial=true;product=small protein SpfP;pseudo=true;start_range=.,134609;transl_table=11 NZ_CPUY01000012.1 RefSeq gene 134830 137628 . - . ID=gene-AD853_RS12550;Name=polA;gbkey=Gene;gene=polA;gene_biotype=protein_coding;locus_tag=AD853_RS12550;old_locus_tag=ERS008462_02536 NZ_CPUY01000012.1 Protein Homology CDS 134830 137628 . - 0 ID=cds-WP_002230341.1;Parent=gene-AD853_RS12550;Dbxref=GenBank:WP_002230341.1;Name=WP_002230341.1;Ontology_term=GO:0006261,GO:0003676,GO:0003677,GO:0003887,GO:0008408;gbkey=CDS;gene=polA;go_function=nucleic acid binding|0003676||IEA,DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA-templated DNA replication|0006261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005191199.1;locus_tag=AD853_RS12550;product=DNA polymerase I;protein_id=WP_002230341.1;transl_table=11 NZ_CPUY01000012.1 RefSeq gene 138119 138742 . - . ID=gene-AD853_RS12555;Name=dsbA;gbkey=Gene;gene=dsbA;gene_biotype=protein_coding;locus_tag=AD853_RS12555;old_locus_tag=ERS008462_02537 NZ_CPUY01000012.1 Protein Homology CDS 138119 138742 . - 0 ID=cds-WP_002213168.1;Parent=gene-AD853_RS12555;Dbxref=GenBank:WP_002213168.1;Name=WP_002213168.1;Ontology_term=GO:0016491;gbkey=CDS;gene=dsbA;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019080347.1;locus_tag=AD853_RS12555;product=thiol:disulfide interchange protein DsbA;protein_id=WP_002213168.1;transl_table=11 NZ_CPUY01000012.1 RefSeq gene 138770 139756 . - . ID=gene-AD853_RS12560;Name=AD853_RS12560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS12560;old_locus_tag=ERS008462_02538 NZ_CPUY01000012.1 Protein Homology CDS 138770 139756 . - 0 ID=cds-WP_038824942.1;Parent=gene-AD853_RS12560;Dbxref=GenBank:WP_038824942.1;Name=WP_038824942.1;Ontology_term=GO:0006468,GO:0004674;gbkey=CDS;go_function=protein serine/threonine kinase activity|0004674||IEA;go_process=protein phosphorylation|0006468||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016582340.1;locus_tag=AD853_RS12560;product=serine/threonine protein kinase;protein_id=WP_038824942.1;transl_table=11 NZ_CPUY01000012.1 RefSeq gene 139847 140116 . - . ID=gene-AD853_RS12565;Name=AD853_RS12565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS12565;old_locus_tag=ERS008462_02539 NZ_CPUY01000012.1 Protein Homology CDS 139847 140116 . - 0 ID=cds-WP_002213170.1;Parent=gene-AD853_RS12565;Dbxref=GenBank:WP_002213170.1;Name=WP_002213170.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005191202.1;locus_tag=AD853_RS12565;product=YihD family protein;protein_id=WP_002213170.1;transl_table=11 NZ_CPUY01000012.1 RefSeq gene 140270 140857 . + . ID=gene-AD853_RS12570;Name=mobA;gbkey=Gene;gene=mobA;gene_biotype=protein_coding;locus_tag=AD853_RS12570;old_locus_tag=ERS008462_02540 NZ_CPUY01000012.1 Protein Homology CDS 140270 140857 . + 0 ID=cds-WP_011991007.1;Parent=gene-AD853_RS12570;Dbxref=GenBank:WP_011991007.1;Name=WP_011991007.1;Ontology_term=GO:0006777,GO:0003824;gbkey=CDS;gene=mobA;go_function=catalytic activity|0003824||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011991007.1;locus_tag=AD853_RS12570;product=molybdenum cofactor guanylyltransferase MobA;protein_id=WP_011991007.1;transl_table=11 NZ_CPUY01000012.1 RefSeq gene 140857 141387 . + . ID=gene-AD853_RS12575;Name=mobB;gbkey=Gene;gene=mobB;gene_biotype=protein_coding;locus_tag=AD853_RS12575;old_locus_tag=ERS008462_02541 NZ_CPUY01000012.1 Protein Homology CDS 140857 141387 . + 0 ID=cds-WP_002217538.1;Parent=gene-AD853_RS12575;Dbxref=GenBank:WP_002217538.1;Name=WP_002217538.1;Ontology_term=GO:0006777,GO:0005525;gbkey=CDS;gene=mobB;go_function=GTP binding|0005525||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002217538.1;locus_tag=AD853_RS12575;product=molybdopterin-guanine dinucleotide biosynthesis protein MobB;protein_id=WP_002217538.1;transl_table=11 NZ_CPUY01000012.1 RefSeq gene 141445 142653 . - . ID=gene-AD853_RS12580;Name=AD853_RS12580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS12580;old_locus_tag=ERS008462_02542 NZ_CPUY01000012.1 Protein Homology CDS 141445 142653 . - 0 ID=cds-WP_012304013.1;Parent=gene-AD853_RS12580;Dbxref=GenBank:WP_012304013.1;Name=WP_012304013.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343613.1;locus_tag=AD853_RS12580;product=IS256 family transposase;protein_id=WP_012304013.1;transl_table=11 ##sequence-region NZ_CPUY01000013.1 1 142050 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=633 NZ_CPUY01000013.1 RefSeq region 1 142050 . + . ID=NZ_CPUY01000013.1:1..142050;Dbxref=taxon:633;collection-date=1900/2008;country=South Africa;gbkey=Src;genome=genomic;isolation-source=not known;mol_type=genomic DNA;nat-host=pig;serovar=O:3;strain=IP32544 NZ_CPUY01000013.1 RefSeq pseudogene 1 4179 . - . ID=gene-AD853_RS12585;Name=cdiA;gbkey=Gene;gene=cdiA;gene_biotype=pseudogene;locus_tag=AD853_RS12585;partial=true;pseudo=true;start_range=.,1 NZ_CPUY01000013.1 Protein Homology CDS 1 4179 . - 0 ID=cds-AD853_RS12585;Parent=gene-AD853_RS12585;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;gene=cdiA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005188854.1;locus_tag=AD853_RS12585;partial=true;product=contact-dependent inhibition toxin CdiA;pseudo=true;start_range=.,1;transl_table=11 NZ_CPUY01000013.1 RefSeq gene 4183 6291 . - . ID=gene-AD853_RS22690;Name=AD853_RS22690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS22690;old_locus_tag=ERS008462_02544 NZ_CPUY01000013.1 Protein Homology CDS 4183 6291 . - 0 ID=cds-WP_155407238.1;Parent=gene-AD853_RS22690;Dbxref=GenBank:WP_155407238.1;Name=WP_155407238.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017658.6;locus_tag=AD853_RS22690;product=two-partner secretion domain-containing protein;protein_id=WP_155407238.1;transl_table=11 NZ_CPUY01000013.1 RefSeq gene 6336 8024 . - . ID=gene-AD853_RS12590;Name=AD853_RS12590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS12590;old_locus_tag=ERS008462_02545 NZ_CPUY01000013.1 Protein Homology CDS 6336 8024 . - 0 ID=cds-WP_038826907.1;Parent=gene-AD853_RS12590;Dbxref=GenBank:WP_038826907.1;Name=WP_038826907.1;Ontology_term=GO:0006811,GO:0015031,GO:0015288,GO:0046930;gbkey=CDS;go_component=pore complex|0046930||IEA;go_function=porin activity|0015288||IEA;go_process=monoatomic ion transport|0006811||IEA,protein transport|0015031||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011193126.1;locus_tag=AD853_RS12590;product=ShlB/FhaC/HecB family hemolysin secretion/activation protein;protein_id=WP_038826907.1;transl_table=11 NZ_CPUY01000013.1 RefSeq gene 8642 9679 . - . ID=gene-AD853_RS12600;Name=AD853_RS12600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS12600;old_locus_tag=ERS008462_02547 NZ_CPUY01000013.1 Protein Homology CDS 8642 9679 . - 0 ID=cds-WP_038824269.1;Parent=gene-AD853_RS12600;Dbxref=GenBank:WP_038824269.1;Name=WP_038824269.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005974654.1;locus_tag=AD853_RS12600;product=type VI immunity family protein;protein_id=WP_038824269.1;transl_table=11 NZ_CPUY01000013.1 RefSeq gene 9696 11045 . - . ID=gene-AD853_RS12605;Name=AD853_RS12605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS12605;old_locus_tag=ERS008462_02548 NZ_CPUY01000013.1 Protein Homology CDS 9696 11045 . - 0 ID=cds-WP_038824270.1;Parent=gene-AD853_RS12605;Dbxref=GenBank:WP_038824270.1;Name=WP_038824270.1;Ontology_term=GO:0004518;gbkey=CDS;go_function=nuclease activity|0004518||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015731102.1;locus_tag=AD853_RS12605;product=VRR-NUC domain-containing protein;protein_id=WP_038824270.1;transl_table=11 NZ_CPUY01000013.1 RefSeq gene 11050 13212 . - . ID=gene-AD853_RS12610;Name=AD853_RS12610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS12610;old_locus_tag=ERS008462_02549 NZ_CPUY01000013.1 Protein Homology CDS 11050 13212 . - 0 ID=cds-WP_038824271.1;Parent=gene-AD853_RS12610;Dbxref=GenBank:WP_038824271.1;Name=WP_038824271.1;Ontology_term=GO:0033103,GO:0033104;gbkey=CDS;go_component=type VI protein secretion system complex|0033104||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005973532.1;locus_tag=AD853_RS12610;product=type VI secretion system Vgr family protein;protein_id=WP_038824271.1;transl_table=11 NZ_CPUY01000013.1 RefSeq pseudogene 13425 13649 . + . ID=gene-AD853_RS20710;Name=AD853_RS20710;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD853_RS20710;partial=true;pseudo=true;start_range=.,13425 NZ_CPUY01000013.1 Protein Homology CDS 13425 13649 . + 0 ID=cds-AD853_RS20710;Parent=gene-AD853_RS20710;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210396.1;locus_tag=AD853_RS20710;partial=true;product=TerD family protein;pseudo=true;start_range=.,13425;transl_table=11 NZ_CPUY01000013.1 RefSeq pseudogene 13651 13883 . + . ID=gene-AD853_RS12615;Name=AD853_RS12615;end_range=13883,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD853_RS12615;old_locus_tag=ERS008462_02550;partial=true;pseudo=true NZ_CPUY01000013.1 Protein Homology CDS 13651 13883 . + 0 ID=cds-AD853_RS12615;Parent=gene-AD853_RS12615;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=13883,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013087240.1;locus_tag=AD853_RS12615;partial=true;product=VWA domain-containing protein;pseudo=true;transl_table=11 NZ_CPUY01000013.1 RefSeq gene 14167 14736 . + . ID=gene-AD853_RS12625;Name=AD853_RS12625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS12625;old_locus_tag=ERS008462_02551 NZ_CPUY01000013.1 Protein Homology CDS 14167 14736 . + 0 ID=cds-WP_002210400.1;Parent=gene-AD853_RS12625;Dbxref=GenBank:WP_002210400.1;Name=WP_002210400.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210400.1;locus_tag=AD853_RS12625;product=HdeD family acid-resistance protein;protein_id=WP_002210400.1;transl_table=11 NZ_CPUY01000013.1 RefSeq gene 14949 16970 . + . ID=gene-AD853_RS12630;Name=AD853_RS12630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS12630;old_locus_tag=ERS008462_02552 NZ_CPUY01000013.1 Protein Homology CDS 14949 16970 . + 0 ID=cds-WP_038824273.1;Parent=gene-AD853_RS12630;Dbxref=GenBank:WP_038824273.1;Name=WP_038824273.1;Ontology_term=GO:0010181,GO:0016491;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002429085.1;locus_tag=AD853_RS12630;product=NADPH-dependent 2%2C4-dienoyl-CoA reductase;protein_id=WP_038824273.1;transl_table=11 NZ_CPUY01000013.1 RefSeq gene 17086 18273 . - . ID=gene-AD853_RS12635;Name=rlmG;gbkey=Gene;gene=rlmG;gene_biotype=protein_coding;locus_tag=AD853_RS12635;old_locus_tag=ERS008462_02553 NZ_CPUY01000013.1 Protein Homology CDS 17086 18273 . - 0 ID=cds-WP_002210402.1;Parent=gene-AD853_RS12635;Dbxref=GenBank:WP_002210402.1;Name=WP_002210402.1;Ontology_term=GO:0031167,GO:0003676,GO:0008990;gbkey=CDS;gene=rlmG;go_function=nucleic acid binding|0003676||IEA,rRNA (guanine-N2-)-methyltransferase activity|0008990||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005277284.1;locus_tag=AD853_RS12635;product=23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG;protein_id=WP_002210402.1;transl_table=11 NZ_CPUY01000013.1 RefSeq gene 18748 21732 . + . ID=gene-AD853_RS12640;Name=AD853_RS12640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS12640;old_locus_tag=ERS008462_02554 NZ_CPUY01000013.1 Protein Homology CDS 18748 21732 . + 0 ID=cds-WP_050124606.1;Parent=gene-AD853_RS12640;Dbxref=GenBank:WP_050124606.1;Name=WP_050124606.1;Ontology_term=GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210403.1;locus_tag=AD853_RS12640;product=autotransporter outer membrane beta-barrel domain-containing protein;protein_id=WP_050124606.1;transl_table=11 NZ_CPUY01000013.1 RefSeq gene 21971 22480 . + . ID=gene-AD853_RS12645;Name=AD853_RS12645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS12645;old_locus_tag=ERS008462_02555 NZ_CPUY01000013.1 Protein Homology CDS 21971 22480 . + 0 ID=cds-WP_002210404.1;Parent=gene-AD853_RS12645;Dbxref=GenBank:WP_002210404.1;Name=WP_002210404.1;Ontology_term=GO:0008270,GO:0016787,GO:0046872;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210404.1;locus_tag=AD853_RS12645;product=M48 metallopeptidase family protein;protein_id=WP_002210404.1;transl_table=11 NZ_CPUY01000013.1 RefSeq gene 22698 23693 . + . ID=gene-AD853_RS12650;Name=AD853_RS12650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS12650;old_locus_tag=ERS008462_02556 NZ_CPUY01000013.1 Protein Homology CDS 22698 23693 . + 0 ID=cds-WP_012414051.1;Parent=gene-AD853_RS12650;Dbxref=GenBank:WP_012414051.1;Name=WP_012414051.1;Ontology_term=GO:0000166,GO:0003824;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210405.1;locus_tag=AD853_RS12650;product=Gfo/Idh/MocA family protein;protein_id=WP_012414051.1;transl_table=11 NZ_CPUY01000013.1 RefSeq gene 24228 25484 . + . ID=gene-AD853_RS12655;Name=sstT;gbkey=Gene;gene=sstT;gene_biotype=protein_coding;locus_tag=AD853_RS12655;old_locus_tag=ERS008462_02557 NZ_CPUY01000013.1 Protein Homology CDS 24228 25484 . + 0 ID=cds-WP_002216063.1;Parent=gene-AD853_RS12655;Dbxref=GenBank:WP_002216063.1;Name=WP_002216063.1;Ontology_term=GO:0015826,GO:0032329,GO:0015293,GO:0016020;gbkey=CDS;gene=sstT;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA;go_process=threonine transport|0015826||IEA,serine transport|0032329||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012104429.1;locus_tag=AD853_RS12655;product=serine/threonine transporter SstT;protein_id=WP_002216063.1;transl_table=11 NZ_CPUY01000013.1 RefSeq gene 25551 26081 . - . ID=gene-AD853_RS12660;Name=AD853_RS12660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS12660;old_locus_tag=ERS008462_02558 NZ_CPUY01000013.1 Protein Homology CDS 25551 26081 . - 0 ID=cds-WP_002210407.1;Parent=gene-AD853_RS12660;Dbxref=GenBank:WP_002210407.1;Name=WP_002210407.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012104428.1;locus_tag=AD853_RS12660;product=YgjV family protein;protein_id=WP_002210407.1;transl_table=11 NZ_CPUY01000013.1 RefSeq gene 26234 27724 . - . ID=gene-AD853_RS12665;Name=AD853_RS12665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS12665;old_locus_tag=ERS008462_02559 NZ_CPUY01000013.1 Protein Homology CDS 26234 27724 . - 0 ID=cds-WP_012104427.1;Parent=gene-AD853_RS12665;Dbxref=GenBank:WP_012104427.1;Name=WP_012104427.1;Ontology_term=GO:0016829;gbkey=CDS;go_function=lyase activity|0016829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013316279.1;locus_tag=AD853_RS12665;product=UxaA family hydrolase;protein_id=WP_012104427.1;transl_table=11 NZ_CPUY01000013.1 RefSeq gene 27735 29186 . - . ID=gene-AD853_RS12670;Name=AD853_RS12670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS12670;old_locus_tag=ERS008462_02560 NZ_CPUY01000013.1 Protein Homology CDS 27735 29186 . - 0 ID=cds-WP_012303499.1;Parent=gene-AD853_RS12670;Dbxref=GenBank:WP_012303499.1;Name=WP_012303499.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011193132.1;locus_tag=AD853_RS12670;product=tagaturonate reductase;protein_id=WP_012303499.1;transl_table=11 NZ_CPUY01000013.1 RefSeq gene 29385 30794 . - . ID=gene-AD853_RS12675;Name=uxaC;gbkey=Gene;gene=uxaC;gene_biotype=protein_coding;locus_tag=AD853_RS12675;old_locus_tag=ERS008462_02561 NZ_CPUY01000013.1 Protein Homology CDS 29385 30794 . - 0 ID=cds-WP_038823950.1;Parent=gene-AD853_RS12675;Dbxref=GenBank:WP_038823950.1;Name=WP_038823950.1;Ontology_term=GO:0006064,GO:0008880;gbkey=CDS;gene=uxaC;go_function=glucuronate isomerase activity|0008880||IEA;go_process=glucuronate catabolic process|0006064||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210410.1;locus_tag=AD853_RS12675;product=glucuronate isomerase;protein_id=WP_038823950.1;transl_table=11 NZ_CPUY01000013.1 RefSeq gene 31542 32843 . + . ID=gene-AD853_RS12685;Name=AD853_RS12685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS12685;old_locus_tag=ERS008462_02562 NZ_CPUY01000013.1 Protein Homology CDS 31542 32843 . + 0 ID=cds-WP_002353699.1;Parent=gene-AD853_RS12685;Dbxref=GenBank:WP_002353699.1;Name=WP_002353699.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002353699.1;locus_tag=AD853_RS12685;product=MFS transporter;protein_id=WP_002353699.1;transl_table=11 NZ_CPUY01000013.1 RefSeq gene 33106 33900 . + . ID=gene-AD853_RS12690;Name=exuR;gbkey=Gene;gene=exuR;gene_biotype=protein_coding;locus_tag=AD853_RS12690;old_locus_tag=ERS008462_02563 NZ_CPUY01000013.1 Protein Homology CDS 33106 33900 . + 0 ID=cds-WP_002210412.1;Parent=gene-AD853_RS12690;Dbxref=GenBank:WP_002210412.1;Name=WP_002210412.1;gbkey=CDS;gene=exuR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210412.1;locus_tag=AD853_RS12690;product=transcriptional regulator ExuR;protein_id=WP_002210412.1;transl_table=11 NZ_CPUY01000013.1 RefSeq gene 34149 34682 . + . ID=gene-AD853_RS12695;Name=AD853_RS12695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS12695;old_locus_tag=ERS008462_02564 NZ_CPUY01000013.1 Protein Homology CDS 34149 34682 . + 0 ID=cds-WP_012303498.1;Parent=gene-AD853_RS12695;Dbxref=GenBank:WP_012303498.1;Name=WP_012303498.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012303498.1;locus_tag=AD853_RS12695;product=hypothetical protein;protein_id=WP_012303498.1;transl_table=11 NZ_CPUY01000013.1 RefSeq gene 34944 35642 . + . ID=gene-AD853_RS12700;Name=AD853_RS12700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS12700;old_locus_tag=ERS008462_02565 NZ_CPUY01000013.1 Protein Homology CDS 34944 35642 . + 0 ID=cds-WP_002210414.1;Parent=gene-AD853_RS12700;Dbxref=GenBank:WP_002210414.1;Name=WP_002210414.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210414.1;locus_tag=AD853_RS12700;product=DedA family protein;protein_id=WP_002210414.1;transl_table=11 NZ_CPUY01000013.1 RefSeq gene 35639 36028 . + . ID=gene-AD853_RS12705;Name=mzrA;gbkey=Gene;gene=mzrA;gene_biotype=protein_coding;locus_tag=AD853_RS12705;old_locus_tag=ERS008462_02566 NZ_CPUY01000013.1 Protein Homology CDS 35639 36028 . + 0 ID=cds-WP_002210415.1;Parent=gene-AD853_RS12705;Dbxref=GenBank:WP_002210415.1;Name=WP_002210415.1;gbkey=CDS;gene=mzrA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210415.1;locus_tag=AD853_RS12705;product=EnvZ/OmpR regulon moderator MzrA;protein_id=WP_002210415.1;transl_table=11 NZ_CPUY01000013.1 RefSeq gene 36254 36634 . + . ID=gene-AD853_RS12710;Name=AD853_RS12710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS12710;old_locus_tag=ERS008462_02567 NZ_CPUY01000013.1 Protein Homology CDS 36254 36634 . + 0 ID=cds-WP_002210416.1;Parent=gene-AD853_RS12710;Dbxref=GenBank:WP_002210416.1;Name=WP_002210416.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210416.1;locus_tag=AD853_RS12710;product=DUF1090 domain-containing protein;protein_id=WP_002210416.1;transl_table=11 NZ_CPUY01000013.1 RefSeq gene 36789 37094 . + . ID=gene-AD853_RS12720;Name=AD853_RS12720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS12720;old_locus_tag=ERS008462_02568 NZ_CPUY01000013.1 Protein Homology CDS 36789 37094 . + 0 ID=cds-WP_002210418.1;Parent=gene-AD853_RS12720;Dbxref=GenBank:WP_002210418.1;Name=WP_002210418.1;Ontology_term=GO:0043022,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ribosome binding|0043022||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004709853.1;locus_tag=AD853_RS12720;product=ElaB/YgaM/YqjD family protein;protein_id=WP_002210418.1;transl_table=11 NZ_CPUY01000013.1 RefSeq gene 37097 37492 . + . ID=gene-AD853_RS12725;Name=AD853_RS12725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS12725;old_locus_tag=ERS008462_02569 NZ_CPUY01000013.1 Protein Homology CDS 37097 37492 . + 0 ID=cds-WP_002210419.1;Parent=gene-AD853_RS12725;Dbxref=GenBank:WP_002210419.1;Name=WP_002210419.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004705306.1;locus_tag=AD853_RS12725;product=phage holin family protein;protein_id=WP_002210419.1;transl_table=11 NZ_CPUY01000013.1 RefSeq gene 37489 37773 . + . ID=gene-AD853_RS12730;Name=AD853_RS12730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS12730;old_locus_tag=ERS008462_02570 NZ_CPUY01000013.1 Protein Homology CDS 37489 37773 . + 0 ID=cds-WP_002210420.1;Parent=gene-AD853_RS12730;Dbxref=GenBank:WP_002210420.1;Name=WP_002210420.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011193134.1;locus_tag=AD853_RS12730;product=YqjK-like family protein;protein_id=WP_002210420.1;transl_table=11 NZ_CPUY01000013.1 RefSeq gene 38077 38472 . + . ID=gene-AD853_RS12735;Name=AD853_RS12735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS12735;old_locus_tag=ERS008462_02571 NZ_CPUY01000013.1 Protein Homology CDS 38077 38472 . + 0 ID=cds-WP_002210421.1;Parent=gene-AD853_RS12735;Dbxref=GenBank:WP_002210421.1;Name=WP_002210421.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008503138.1;locus_tag=AD853_RS12735;product=DoxX family protein;protein_id=WP_002210421.1;transl_table=11 NZ_CPUY01000013.1 RefSeq gene 38558 39544 . + . ID=gene-AD853_RS12740;Name=AD853_RS12740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS12740;old_locus_tag=ERS008462_02572 NZ_CPUY01000013.1 Protein Homology CDS 38558 39544 . + 0 ID=cds-WP_038823952.1;Parent=gene-AD853_RS12740;Dbxref=GenBank:WP_038823952.1;Name=WP_038823952.1;Ontology_term=GO:0004364,GO:0016491;gbkey=CDS;go_function=glutathione transferase activity|0004364||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012303497.1;locus_tag=AD853_RS12740;product=glutathione S-transferase family protein;protein_id=WP_038823952.1;transl_table=11 NZ_CPUY01000013.1 RefSeq gene 39659 40552 . - . ID=gene-AD853_RS12745;Name=AD853_RS12745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS12745;old_locus_tag=ERS008462_02573 NZ_CPUY01000013.1 Protein Homology CDS 39659 40552 . - 0 ID=cds-WP_002210151.1;Parent=gene-AD853_RS12745;Dbxref=GenBank:WP_002210151.1;Name=WP_002210151.1;Ontology_term=GO:0001216,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription activator activity|0001216||IEA,DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011193136.1;locus_tag=AD853_RS12745;product=LysR family transcriptional regulator;protein_id=WP_002210151.1;transl_table=11 NZ_CPUY01000013.1 RefSeq gene 40814 41518 . + . ID=gene-AD853_RS12750;Name=AD853_RS12750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS12750;old_locus_tag=ERS008462_02574 NZ_CPUY01000013.1 Protein Homology CDS 40814 41518 . + 0 ID=cds-WP_011193137.1;Parent=gene-AD853_RS12750;Dbxref=GenBank:WP_011193137.1;Name=WP_011193137.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210150.1;locus_tag=AD853_RS12750;product=pirin family protein;protein_id=WP_011193137.1;transl_table=11 NZ_CPUY01000013.1 RefSeq gene 41605 41983 . - . ID=gene-AD853_RS13195;Name=rnpB;gbkey=Gene;gene=rnpB;gene_biotype=RNase_P_RNA;locus_tag=AD853_RS13195 NZ_CPUY01000013.1 cmsearch RNase_P_RNA 41605 41983 . - . ID=rna-AD853_RS13195;Parent=gene-AD853_RS13195;Dbxref=RFAM:RF00010;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD853_RS13195;product=RNase P RNA component class A NZ_CPUY01000013.1 cmsearch exon 41605 41983 . - . ID=exon-AD853_RS13195-1;Parent=rna-AD853_RS13195;Dbxref=RFAM:RF00010;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD853_RS13195;product=RNase P RNA component class A NZ_CPUY01000013.1 RefSeq gene 42003 42902 . - . ID=gene-AD853_RS12755;Name=rsmI;gbkey=Gene;gene=rsmI;gene_biotype=protein_coding;locus_tag=AD853_RS12755;old_locus_tag=ERS008462_02576 NZ_CPUY01000013.1 Protein Homology CDS 42003 42902 . - 0 ID=cds-WP_002210149.1;Parent=gene-AD853_RS12755;Dbxref=GenBank:WP_002210149.1;Name=WP_002210149.1;Ontology_term=GO:0008168;gbkey=CDS;gene=rsmI;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210149.1;locus_tag=AD853_RS12755;product=16S rRNA (cytidine(1402)-2'-O)-methyltransferase;protein_id=WP_002210149.1;transl_table=11 NZ_CPUY01000013.1 RefSeq gene 42965 44938 . + . ID=gene-AD853_RS12760;Name=AD853_RS12760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS12760;old_locus_tag=ERS008462_02577 NZ_CPUY01000013.1 Protein Homology CDS 42965 44938 . + 0 ID=cds-WP_038823960.1;Parent=gene-AD853_RS12760;Dbxref=GenBank:WP_038823960.1;Name=WP_038823960.1;Ontology_term=GO:0008360,GO:0009252,GO:0004553,GO:0019899,GO:0030234;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA,enzyme binding|0019899||IEA,enzyme regulator activity|0030234||IEA;go_process=regulation of cell shape|0008360||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011193138.1;locus_tag=AD853_RS12760;product=penicillin-binding protein activator;protein_id=WP_038823960.1;transl_table=11 NZ_CPUY01000013.1 RefSeq gene 45037 45390 . + . ID=gene-AD853_RS12765;Name=AD853_RS12765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS12765;old_locus_tag=ERS008462_02578 NZ_CPUY01000013.1 Protein Homology CDS 45037 45390 . + 0 ID=cds-WP_002210147.1;Parent=gene-AD853_RS12765;Dbxref=GenBank:WP_002210147.1;Name=WP_002210147.1;Ontology_term=GO:0003676,GO:0004518;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,nuclease activity|0004518||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210147.1;locus_tag=AD853_RS12765;product=YraN family protein;protein_id=WP_002210147.1;transl_table=11 NZ_CPUY01000013.1 RefSeq gene 45661 46251 . + . ID=gene-AD853_RS12770;Name=diaA;gbkey=Gene;gene=diaA;gene_biotype=protein_coding;locus_tag=AD853_RS12770;old_locus_tag=ERS008462_02579 NZ_CPUY01000013.1 Protein Homology CDS 45661 46251 . + 0 ID=cds-WP_011193139.1;Parent=gene-AD853_RS12770;Dbxref=GenBank:WP_011193139.1;Name=WP_011193139.1;gbkey=CDS;gene=diaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312057.1;locus_tag=AD853_RS12770;product=DnaA initiator-associating protein DiaA;protein_id=WP_011193139.1;transl_table=11 NZ_CPUY01000013.1 RefSeq gene 46262 46837 . + . ID=gene-AD853_RS12775;Name=dolP;gbkey=Gene;gene=dolP;gene_biotype=protein_coding;locus_tag=AD853_RS12775;old_locus_tag=ERS008462_02580 NZ_CPUY01000013.1 Protein Homology CDS 46262 46837 . + 0 ID=cds-WP_011193140.1;Parent=gene-AD853_RS12775;Dbxref=GenBank:WP_011193140.1;Name=WP_011193140.1;Ontology_term=GO:0006970;gbkey=CDS;gene=dolP;go_process=response to osmotic stress|0006970||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012104422.1;locus_tag=AD853_RS12775;product=division/outer membrane stress-associated lipid-binding lipoprotein;protein_id=WP_011193140.1;transl_table=11 NZ_CPUY01000013.1 RefSeq gene 47044 47769 . - . ID=gene-AD853_RS12780;Name=mtgA;gbkey=Gene;gene=mtgA;gene_biotype=protein_coding;locus_tag=AD853_RS12780;old_locus_tag=ERS008462_02581 NZ_CPUY01000013.1 Protein Homology CDS 47044 47769 . - 0 ID=cds-WP_011193141.1;Parent=gene-AD853_RS12780;Dbxref=GenBank:WP_011193141.1;Name=WP_011193141.1;Ontology_term=GO:0009252,GO:0016763,GO:0009274,GO:0016020;gbkey=CDS;gene=mtgA;go_component=peptidoglycan-based cell wall|0009274||IEA,membrane|0016020||IEA;go_function=pentosyltransferase activity|0016763||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012303494.1;locus_tag=AD853_RS12780;product=monofunctional biosynthetic peptidoglycan transglycosylase;protein_id=WP_011193141.1;transl_table=11 NZ_CPUY01000013.1 RefSeq gene 47766 48419 . - . ID=gene-AD853_RS12785;Name=elbB;gbkey=Gene;gene=elbB;gene_biotype=protein_coding;locus_tag=AD853_RS12785;old_locus_tag=ERS008462_02582 NZ_CPUY01000013.1 Protein Homology CDS 47766 48419 . - 0 ID=cds-WP_012104420.1;Parent=gene-AD853_RS12785;Dbxref=GenBank:WP_012104420.1;Name=WP_012104420.1;gbkey=CDS;gene=elbB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210143.1;locus_tag=AD853_RS12785;product=isoprenoid biosynthesis glyoxalase ElbB;protein_id=WP_012104420.1;transl_table=11 NZ_CPUY01000013.1 RefSeq gene 48661 50997 . - . ID=gene-AD853_RS12795;Name=arcB;gbkey=Gene;gene=arcB;gene_biotype=protein_coding;locus_tag=AD853_RS12795;old_locus_tag=ERS008462_02584 NZ_CPUY01000013.1 Protein Homology CDS 48661 50997 . - 0 ID=cds-WP_038823955.1;Parent=gene-AD853_RS12795;Dbxref=GenBank:WP_038823955.1;Name=WP_038823955.1;Ontology_term=GO:0000160,GO:0006355,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=arcB;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210142.1;locus_tag=AD853_RS12795;product=aerobic respiration two-component sensor histidine kinase ArcB;protein_id=WP_038823955.1;transl_table=11 NZ_CPUY01000013.1 RefSeq gene 51281 52204 . - . ID=gene-AD853_RS12805;Name=mnmL;gbkey=Gene;gene=mnmL;gene_biotype=protein_coding;gene_synonym=ytqA;locus_tag=AD853_RS12805;old_locus_tag=ERS008462_02586 NZ_CPUY01000013.1 Protein Homology CDS 51281 52204 . - 0 ID=cds-WP_038823963.1;Parent=gene-AD853_RS12805;Dbxref=GenBank:WP_038823963.1;Name=WP_038823963.1;Note=This family includes YhcC from E. coli K-12%2C an uncharacterized radical SAM protein.;Ontology_term=GO:0006400,GO:0051536,GO:1904047;gbkey=CDS;gene=mnmL;go_function=iron-sulfur cluster binding|0051536||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210140.1;locus_tag=AD853_RS12805;product=tRNA modification radical SAM protein MnmL/YtqA;protein_id=WP_038823963.1;transl_table=11 NZ_CPUY01000013.1 RefSeq gene 53027 57484 . + . ID=gene-AD853_RS12810;Name=gltB;gbkey=Gene;gene=gltB;gene_biotype=protein_coding;locus_tag=AD853_RS12810;old_locus_tag=ERS008462_02587 NZ_CPUY01000013.1 Protein Homology CDS 53027 57484 . + 0 ID=cds-WP_050124607.1;Parent=gene-AD853_RS12810;Dbxref=GenBank:WP_050124607.1;Name=WP_050124607.1;Ontology_term=GO:0006537,GO:0008152,GO:0003824,GO:0015930,GO:0016491;gbkey=CDS;gene=gltB;go_function=catalytic activity|0003824||IEA,glutamate synthase activity|0015930||IEA,oxidoreductase activity|0016491||IEA;go_process=glutamate biosynthetic process|0006537||IEA,metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229064.1;locus_tag=AD853_RS12810;product=glutamate synthase large subunit;protein_id=WP_050124607.1;transl_table=11 NZ_CPUY01000013.1 RefSeq gene 57494 58912 . + . ID=gene-AD853_RS12815;Name=AD853_RS12815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS12815;old_locus_tag=ERS008462_02588 NZ_CPUY01000013.1 Protein Homology CDS 57494 58912 . + 0 ID=cds-WP_038823958.1;Parent=gene-AD853_RS12815;Dbxref=GenBank:WP_038823958.1;Name=WP_038823958.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001540975.1;locus_tag=AD853_RS12815;product=glutamate synthase small subunit;protein_id=WP_038823958.1;transl_table=11 NZ_CPUY01000013.1 RefSeq gene 59512 59997 . + . ID=gene-AD853_RS12820;Name=AD853_RS12820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS12820;old_locus_tag=ERS008462_02589 NZ_CPUY01000013.1 Protein Homology CDS 59512 59997 . + 0 ID=cds-WP_038823982.1;Parent=gene-AD853_RS12820;Dbxref=GenBank:WP_038823982.1;Name=WP_038823982.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002224291.1;locus_tag=AD853_RS12820;product=hypothetical protein;protein_id=WP_038823982.1;transl_table=11 NZ_CPUY01000013.1 RefSeq gene 60150 60665 . - . ID=gene-AD853_RS12825;Name=sspB;gbkey=Gene;gene=sspB;gene_biotype=protein_coding;locus_tag=AD853_RS12825;old_locus_tag=ERS008462_02590 NZ_CPUY01000013.1 Protein Homology CDS 60150 60665 . - 0 ID=cds-WP_012104417.1;Parent=gene-AD853_RS12825;Dbxref=GenBank:WP_012104417.1;Name=WP_012104417.1;gbkey=CDS;gene=sspB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004701342.1;locus_tag=AD853_RS12825;product=ClpXP protease specificity-enhancing factor;protein_id=WP_012104417.1;transl_table=11 NZ_CPUY01000013.1 RefSeq gene 60671 61312 . - . ID=gene-AD853_RS12830;Name=sspA;gbkey=Gene;gene=sspA;gene_biotype=protein_coding;locus_tag=AD853_RS12830;old_locus_tag=ERS008462_02591 NZ_CPUY01000013.1 Protein Homology CDS 60671 61312 . - 0 ID=cds-WP_002210135.1;Parent=gene-AD853_RS12830;Dbxref=GenBank:WP_002210135.1;Name=WP_002210135.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;gene=sspA;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210135.1;locus_tag=AD853_RS12830;product=stringent starvation protein SspA;protein_id=WP_002210135.1;transl_table=11 NZ_CPUY01000013.1 RefSeq gene 61492 61689 . + . ID=gene-AD853_RS12835;Name=AD853_RS12835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS12835 NZ_CPUY01000013.1 Protein Homology CDS 61492 61689 . + 0 ID=cds-WP_002230558.1;Parent=gene-AD853_RS12835;Dbxref=GenBank:WP_002230558.1;Name=WP_002230558.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002230558.1;locus_tag=AD853_RS12835;product=hypothetical protein;protein_id=WP_002230558.1;transl_table=11 NZ_CPUY01000013.1 RefSeq gene 61686 62078 . - . ID=gene-AD853_RS12840;Name=rpsI;gbkey=Gene;gene=rpsI;gene_biotype=protein_coding;locus_tag=AD853_RS12840;old_locus_tag=ERS008462_02592 NZ_CPUY01000013.1 Protein Homology CDS 61686 62078 . - 0 ID=cds-WP_002210133.1;Parent=gene-AD853_RS12840;Dbxref=GenBank:WP_002210133.1;Name=WP_002210133.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsI;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000829824.1;locus_tag=AD853_RS12840;product=30S ribosomal protein S9;protein_id=WP_002210133.1;transl_table=11 NZ_CPUY01000013.1 RefSeq gene 62093 62521 . - . ID=gene-AD853_RS12845;Name=rplM;gbkey=Gene;gene=rplM;gene_biotype=protein_coding;locus_tag=AD853_RS12845;old_locus_tag=ERS008462_02593 NZ_CPUY01000013.1 Protein Homology CDS 62093 62521 . - 0 ID=cds-WP_002210132.1;Parent=gene-AD853_RS12845;Dbxref=GenBank:WP_002210132.1;Name=WP_002210132.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplM;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010847760.1;locus_tag=AD853_RS12845;product=50S ribosomal protein L13;protein_id=WP_002210132.1;transl_table=11 NZ_CPUY01000013.1 RefSeq gene 62835 63962 . - . ID=gene-AD853_RS12850;Name=zapE;gbkey=Gene;gene=zapE;gene_biotype=protein_coding;locus_tag=AD853_RS12850;old_locus_tag=ERS008462_02594 NZ_CPUY01000013.1 Protein Homology CDS 62835 63962 . - 0 ID=cds-WP_002210131.1;Parent=gene-AD853_RS12850;Dbxref=GenBank:WP_002210131.1;Name=WP_002210131.1;Ontology_term=GO:0051301,GO:0005524,GO:0016887;gbkey=CDS;gene=zapE;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002220218.1;locus_tag=AD853_RS12850;product=cell division protein ZapE;protein_id=WP_002210131.1;transl_table=11 NZ_CPUY01000013.1 RefSeq gene 64186 64590 . + . ID=gene-AD853_RS12855;Name=zapG;gbkey=Gene;gene=zapG;gene_biotype=protein_coding;locus_tag=AD853_RS12855;old_locus_tag=ERS008462_02595 NZ_CPUY01000013.1 Protein Homology CDS 64186 64590 . + 0 ID=cds-WP_002210130.1;Parent=gene-AD853_RS12855;Dbxref=GenBank:WP_002210130.1;Name=WP_002210130.1;gbkey=CDS;gene=zapG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004722362.1;locus_tag=AD853_RS12855;product=Z-ring associated protein ZapG;protein_id=WP_002210130.1;transl_table=11 NZ_CPUY01000013.1 RefSeq gene 64861 66234 . + . ID=gene-AD853_RS12860;Name=degQ;gbkey=Gene;gene=degQ;gene_biotype=protein_coding;locus_tag=AD853_RS12860;old_locus_tag=ERS008462_02596 NZ_CPUY01000013.1 Protein Homology CDS 64861 66234 . + 0 ID=cds-WP_038831615.1;Parent=gene-AD853_RS12860;Dbxref=GenBank:WP_038831615.1;Name=WP_038831615.1;Ontology_term=GO:0006508,GO:0004252,GO:0005515;gbkey=CDS;gene=degQ;go_function=serine-type endopeptidase activity|0004252||IEA,protein binding|0005515||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002218066.1;locus_tag=AD853_RS12860;product=serine endoprotease DegQ;protein_id=WP_038831615.1;transl_table=11 NZ_CPUY01000013.1 RefSeq gene 66324 67412 . + . ID=gene-AD853_RS12865;Name=degS;gbkey=Gene;gene=degS;gene_biotype=protein_coding;locus_tag=AD853_RS12865;old_locus_tag=ERS008462_02597 NZ_CPUY01000013.1 Protein Homology CDS 66324 67412 . + 0 ID=cds-WP_002210128.1;Parent=gene-AD853_RS12865;Dbxref=GenBank:WP_002210128.1;Name=WP_002210128.1;Ontology_term=GO:0006508,GO:0004252;gbkey=CDS;gene=degS;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210128.1;locus_tag=AD853_RS12865;product=outer membrane-stress sensor serine endopeptidase DegS;protein_id=WP_002210128.1;transl_table=11 NZ_CPUY01000013.1 RefSeq gene 67593 68855 . - . ID=gene-AD853_RS12870;Name=murA;gbkey=Gene;gene=murA;gene_biotype=protein_coding;locus_tag=AD853_RS12870;old_locus_tag=ERS008462_02598 NZ_CPUY01000013.1 Protein Homology CDS 67593 68855 . - 0 ID=cds-WP_002210127.1;Parent=gene-AD853_RS12870;Dbxref=GenBank:WP_002210127.1;Name=WP_002210127.1;Ontology_term=GO:0019277,GO:0008760;gbkey=CDS;gene=murA;go_function=UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity|0008760||IEA;go_process=UDP-N-acetylgalactosamine biosynthetic process|0019277||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210127.1;locus_tag=AD853_RS12870;product=UDP-N-acetylglucosamine 1-carboxyvinyltransferase;protein_id=WP_002210127.1;transl_table=11 NZ_CPUY01000013.1 RefSeq gene 69009 69263 . - . ID=gene-AD853_RS12875;Name=ibaG;gbkey=Gene;gene=ibaG;gene_biotype=protein_coding;locus_tag=AD853_RS12875;old_locus_tag=ERS008462_02599 NZ_CPUY01000013.1 Protein Homology CDS 69009 69263 . - 0 ID=cds-WP_012104414.1;Parent=gene-AD853_RS12875;Dbxref=GenBank:WP_012104414.1;Name=WP_012104414.1;gbkey=CDS;gene=ibaG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004701358.1;locus_tag=AD853_RS12875;product=BolA family iron metabolism protein IbaG;protein_id=WP_012104414.1;transl_table=11 NZ_CPUY01000013.1 RefSeq gene 69410 69712 . - . ID=gene-AD853_RS12880;Name=mlaB;gbkey=Gene;gene=mlaB;gene_biotype=protein_coding;locus_tag=AD853_RS12880;old_locus_tag=ERS008462_02600 NZ_CPUY01000013.1 Protein Homology CDS 69410 69712 . - 0 ID=cds-WP_002210125.1;Parent=gene-AD853_RS12880;Dbxref=GenBank:WP_002210125.1;Name=WP_002210125.1;gbkey=CDS;gene=mlaB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210125.1;locus_tag=AD853_RS12880;product=lipid asymmetry maintenance protein MlaB;protein_id=WP_002210125.1;transl_table=11 NZ_CPUY01000013.1 RefSeq gene 69748 70371 . - . ID=gene-AD853_RS12885;Name=mlaC;gbkey=Gene;gene=mlaC;gene_biotype=protein_coding;locus_tag=AD853_RS12885;old_locus_tag=ERS008462_02601 NZ_CPUY01000013.1 Protein Homology CDS 69748 70371 . - 0 ID=cds-WP_002210124.1;Parent=gene-AD853_RS12885;Dbxref=GenBank:WP_002210124.1;Name=WP_002210124.1;gbkey=CDS;gene=mlaC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210124.1;locus_tag=AD853_RS12885;product=phospholipid-binding protein MlaC;protein_id=WP_002210124.1;transl_table=11 NZ_CPUY01000013.1 RefSeq gene 70384 70941 . - . ID=gene-AD853_RS12890;Name=mlaD;gbkey=Gene;gene=mlaD;gene_biotype=protein_coding;locus_tag=AD853_RS12890;old_locus_tag=ERS008462_02602 NZ_CPUY01000013.1 Protein Homology CDS 70384 70941 . - 0 ID=cds-WP_011193146.1;Parent=gene-AD853_RS12890;Dbxref=GenBank:WP_011193146.1;Name=WP_011193146.1;Ontology_term=GO:0015914;gbkey=CDS;gene=mlaD;go_process=phospholipid transport|0015914||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016595794.1;locus_tag=AD853_RS12890;product=outer membrane lipid asymmetry maintenance protein MlaD;protein_id=WP_011193146.1;transl_table=11 NZ_CPUY01000013.1 RefSeq gene 70946 71728 . - . ID=gene-AD853_RS12895;Name=mlaE;gbkey=Gene;gene=mlaE;gene_biotype=protein_coding;locus_tag=AD853_RS12895;old_locus_tag=ERS008462_02603 NZ_CPUY01000013.1 Protein Homology CDS 70946 71728 . - 0 ID=cds-WP_002210122.1;Parent=gene-AD853_RS12895;Dbxref=GenBank:WP_002210122.1;Name=WP_002210122.1;Ontology_term=GO:0043190;gbkey=CDS;gene=mlaE;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013650484.1;locus_tag=AD853_RS12895;product=lipid asymmetry maintenance ABC transporter permease subunit MlaE;protein_id=WP_002210122.1;transl_table=11 NZ_CPUY01000013.1 RefSeq gene 71946 72764 . - . ID=gene-AD853_RS12900;Name=mlaF;gbkey=Gene;gene=mlaF;gene_biotype=protein_coding;locus_tag=AD853_RS12900;old_locus_tag=ERS008462_02604 NZ_CPUY01000013.1 Protein Homology CDS 71946 72764 . - 0 ID=cds-WP_002210121.1;Parent=gene-AD853_RS12900;Dbxref=GenBank:WP_002210121.1;Name=WP_002210121.1;Ontology_term=GO:0005524;gbkey=CDS;gene=mlaF;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210121.1;locus_tag=AD853_RS12900;product=phospholipid ABC transporter ATP-binding protein MlaF;protein_id=WP_002210121.1;transl_table=11 NZ_CPUY01000013.1 RefSeq gene 73029 74003 . + . ID=gene-AD853_RS12905;Name=AD853_RS12905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS12905;old_locus_tag=ERS008462_02605 NZ_CPUY01000013.1 Protein Homology CDS 73029 74003 . + 0 ID=cds-WP_002210120.1;Parent=gene-AD853_RS12905;Dbxref=GenBank:WP_002210120.1;Name=WP_002210120.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210120.1;locus_tag=AD853_RS12905;product=calcium/sodium antiporter;protein_id=WP_002210120.1;transl_table=11 NZ_CPUY01000013.1 RefSeq gene 74114 75100 . + . ID=gene-AD853_RS12910;Name=kdsD;gbkey=Gene;gene=kdsD;gene_biotype=protein_coding;locus_tag=AD853_RS12910;old_locus_tag=ERS008462_02606 NZ_CPUY01000013.1 Protein Homology CDS 74114 75100 . + 0 ID=cds-WP_002210119.1;Parent=gene-AD853_RS12910;Dbxref=GenBank:WP_002210119.1;Name=WP_002210119.1;Ontology_term=GO:1901135,GO:0016853,GO:0097367;gbkey=CDS;gene=kdsD;go_function=isomerase activity|0016853||IEA,carbohydrate derivative binding|0097367||IEA;go_process=carbohydrate derivative metabolic process|1901135||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210119.1;locus_tag=AD853_RS12910;product=arabinose-5-phosphate isomerase KdsD;protein_id=WP_002210119.1;transl_table=11 NZ_CPUY01000013.1 RefSeq gene 75366 75929 . + . ID=gene-AD853_RS12915;Name=kdsC;gbkey=Gene;gene=kdsC;gene_biotype=protein_coding;locus_tag=AD853_RS12915;old_locus_tag=ERS008462_02607 NZ_CPUY01000013.1 Protein Homology CDS 75366 75929 . + 0 ID=cds-WP_002228203.1;Parent=gene-AD853_RS12915;Dbxref=GenBank:WP_002228203.1;Name=WP_002228203.1;Ontology_term=GO:0016788;gbkey=CDS;gene=kdsC;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004722388.1;locus_tag=AD853_RS12915;product=3-deoxy-manno-octulosonate-8-phosphatase KdsC;protein_id=WP_002228203.1;transl_table=11 NZ_CPUY01000013.1 RefSeq gene 75926 76489 . + . ID=gene-AD853_RS12920;Name=lptC;gbkey=Gene;gene=lptC;gene_biotype=protein_coding;locus_tag=AD853_RS12920;old_locus_tag=ERS008462_02608 NZ_CPUY01000013.1 Protein Homology CDS 75926 76489 . + 0 ID=cds-WP_011193147.1;Parent=gene-AD853_RS12920;Dbxref=GenBank:WP_011193147.1;Name=WP_011193147.1;gbkey=CDS;gene=lptC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011193147.1;locus_tag=AD853_RS12920;product=LPS export ABC transporter periplasmic protein LptC;protein_id=WP_011193147.1;transl_table=11 NZ_CPUY01000013.1 RefSeq gene 76473 77018 . + . ID=gene-AD853_RS12925;Name=lptA;gbkey=Gene;gene=lptA;gene_biotype=protein_coding;locus_tag=AD853_RS12925;old_locus_tag=ERS008462_02609 NZ_CPUY01000013.1 Protein Homology CDS 76473 77018 . + 0 ID=cds-WP_038823980.1;Parent=gene-AD853_RS12925;Dbxref=GenBank:WP_038823980.1;Name=WP_038823980.1;gbkey=CDS;gene=lptA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012303488.1;locus_tag=AD853_RS12925;product=lipopolysaccharide ABC transporter substrate-binding protein LptA;protein_id=WP_038823980.1;transl_table=11 NZ_CPUY01000013.1 RefSeq gene 77025 77750 . + . ID=gene-AD853_RS12930;Name=lptB;gbkey=Gene;gene=lptB;gene_biotype=protein_coding;locus_tag=AD853_RS12930;old_locus_tag=ERS008462_02610 NZ_CPUY01000013.1 Protein Homology CDS 77025 77750 . + 0 ID=cds-WP_002210116.1;Parent=gene-AD853_RS12930;Dbxref=GenBank:WP_002210116.1;Name=WP_002210116.1;Ontology_term=GO:0055085,GO:0005524,GO:0043190;gbkey=CDS;gene=lptB;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229050.1;locus_tag=AD853_RS12930;product=LPS export ABC transporter ATP-binding protein;protein_id=WP_002210116.1;transl_table=11 NZ_CPUY01000013.1 RefSeq gene 77812 79245 . + . ID=gene-AD853_RS12935;Name=rpoN;gbkey=Gene;gene=rpoN;gene_biotype=protein_coding;locus_tag=AD853_RS12935;old_locus_tag=ERS008462_02611 NZ_CPUY01000013.1 Protein Homology CDS 77812 79245 . + 0 ID=cds-WP_002210115.1;Parent=gene-AD853_RS12935;Dbxref=GenBank:WP_002210115.1;Name=WP_002210115.1;Ontology_term=GO:0006352,GO:0001216,GO:0003677,GO:0016987;gbkey=CDS;gene=rpoN;go_function=DNA-binding transcription activator activity|0001216||IEA,DNA binding|0003677||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312108.1;locus_tag=AD853_RS12935;product=RNA polymerase factor sigma-54;protein_id=WP_002210115.1;transl_table=11 NZ_CPUY01000013.1 RefSeq gene 79269 79556 . + . ID=gene-AD853_RS12940;Name=hpf;gbkey=Gene;gene=hpf;gene_biotype=protein_coding;locus_tag=AD853_RS12940;old_locus_tag=ERS008462_02612 NZ_CPUY01000013.1 Protein Homology CDS 79269 79556 . + 0 ID=cds-WP_004392031.1;Parent=gene-AD853_RS12940;Dbxref=GenBank:WP_004392031.1;Name=WP_004392031.1;Ontology_term=GO:0044238;gbkey=CDS;gene=hpf;go_process=primary metabolic process|0044238||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462231.1;locus_tag=AD853_RS12940;product=ribosome hibernation promoting factor;protein_id=WP_004392031.1;transl_table=11 NZ_CPUY01000013.1 RefSeq gene 79674 80156 . + . ID=gene-AD853_RS12945;Name=ptsN;gbkey=Gene;gene=ptsN;gene_biotype=protein_coding;locus_tag=AD853_RS12945;old_locus_tag=ERS008462_02613 NZ_CPUY01000013.1 Protein Homology CDS 79674 80156 . + 0 ID=cds-WP_002213952.1;Parent=gene-AD853_RS12945;Dbxref=GenBank:WP_002213952.1;Name=WP_002213952.1;gbkey=CDS;gene=ptsN;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002213952.1;locus_tag=AD853_RS12945;product=PTS IIA-like nitrogen regulatory protein PtsN;protein_id=WP_002213952.1;transl_table=11 NZ_CPUY01000013.1 RefSeq gene 80462 81316 . + . ID=gene-AD853_RS12950;Name=rapZ;gbkey=Gene;gene=rapZ;gene_biotype=protein_coding;locus_tag=AD853_RS12950;old_locus_tag=ERS008462_02614 NZ_CPUY01000013.1 Protein Homology CDS 80462 81316 . + 0 ID=cds-WP_002210113.1;Parent=gene-AD853_RS12950;Dbxref=GenBank:WP_002210113.1;Name=WP_002210113.1;Ontology_term=GO:0005524;gbkey=CDS;gene=rapZ;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012147065.1;locus_tag=AD853_RS12950;product=RNase adapter RapZ;protein_id=WP_002210113.1;transl_table=11 NZ_CPUY01000013.1 RefSeq gene 81313 81585 . + . ID=gene-AD853_RS12955;Name=npr;gbkey=Gene;gene=npr;gene_biotype=protein_coding;locus_tag=AD853_RS12955;old_locus_tag=ERS008462_02615 NZ_CPUY01000013.1 Protein Homology CDS 81313 81585 . + 0 ID=cds-WP_002210112.1;Parent=gene-AD853_RS12955;Dbxref=GenBank:WP_002210112.1;Name=WP_002210112.1;gbkey=CDS;gene=npr;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000216792.1;locus_tag=AD853_RS12955;product=PTS phosphocarrier protein NPr;protein_id=WP_002210112.1;transl_table=11 NZ_CPUY01000013.1 RefSeq gene 81923 82858 . + . ID=gene-AD853_RS12960;Name=pyrB;gbkey=Gene;gene=pyrB;gene_biotype=protein_coding;locus_tag=AD853_RS12960;old_locus_tag=ERS008462_02616 NZ_CPUY01000013.1 Protein Homology CDS 81923 82858 . + 0 ID=cds-WP_012104413.1;Parent=gene-AD853_RS12960;Dbxref=GenBank:WP_012104413.1;Name=WP_012104413.1;Ontology_term=GO:0006207,GO:0004070;gbkey=CDS;gene=pyrB;go_function=aspartate carbamoyltransferase activity|0004070||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210111.1;locus_tag=AD853_RS12960;product=aspartate carbamoyltransferase;protein_id=WP_012104413.1;transl_table=11 NZ_CPUY01000013.1 RefSeq gene 82870 83334 . + . ID=gene-AD853_RS12965;Name=pyrI;gbkey=Gene;gene=pyrI;gene_biotype=protein_coding;locus_tag=AD853_RS12965;old_locus_tag=ERS008462_02617 NZ_CPUY01000013.1 Protein Homology CDS 82870 83334 . + 0 ID=cds-WP_012104412.1;Parent=gene-AD853_RS12965;Dbxref=GenBank:WP_012104412.1;Name=WP_012104412.1;Ontology_term=GO:0006207,GO:0009347;gbkey=CDS;gene=pyrI;go_component=aspartate carbamoyltransferase complex|0009347||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210110.1;locus_tag=AD853_RS12965;product=aspartate carbamoyltransferase regulatory subunit;protein_id=WP_012104412.1;transl_table=11 NZ_CPUY01000013.1 RefSeq gene 83472 83858 . + . ID=gene-AD853_RS12970;Name=ridA;gbkey=Gene;gene=ridA;gene_biotype=protein_coding;locus_tag=AD853_RS12970;old_locus_tag=ERS008462_02618 NZ_CPUY01000013.1 Protein Homology CDS 83472 83858 . + 0 ID=cds-WP_011193150.1;Parent=gene-AD853_RS12970;Dbxref=GenBank:WP_011193150.1;Name=WP_011193150.1;gbkey=CDS;gene=ridA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004874062.1;locus_tag=AD853_RS12970;product=2-iminobutanoate/2-iminopropanoate deaminase;protein_id=WP_011193150.1;transl_table=11 NZ_CPUY01000013.1 RefSeq gene 84157 84633 . + . ID=gene-AD853_RS12975;Name=AD853_RS12975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS12975;old_locus_tag=ERS008462_02619 NZ_CPUY01000013.1 Protein Homology CDS 84157 84633 . + 0 ID=cds-WP_002210107.1;Parent=gene-AD853_RS12975;Dbxref=GenBank:WP_002210107.1;Name=WP_002210107.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016256866.1;locus_tag=AD853_RS12975;product=PliI family lysozyme inhibitor of I-type lysozyme;protein_id=WP_002210107.1;transl_table=11 NZ_CPUY01000013.1 RefSeq gene 84867 85820 . + . ID=gene-AD853_RS12980;Name=treR;gbkey=Gene;gene=treR;gene_biotype=protein_coding;locus_tag=AD853_RS12980;old_locus_tag=ERS008462_02620 NZ_CPUY01000013.1 Protein Homology CDS 84867 85820 . + 0 ID=cds-WP_002210106.1;Parent=gene-AD853_RS12980;Dbxref=GenBank:WP_002210106.1;Name=WP_002210106.1;Ontology_term=GO:0005991,GO:0006355,GO:0045892,GO:0003677;gbkey=CDS;gene=treR;go_function=DNA binding|0003677||IEA;go_process=trehalose metabolic process|0005991||IEA,regulation of DNA-templated transcription|0006355||IEA,negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002426355.1;locus_tag=AD853_RS12980;product=trehalose operon repressor TreR;protein_id=WP_002210106.1;transl_table=11 NZ_CPUY01000013.1 RefSeq gene 86231 87646 . + . ID=gene-AD853_RS12985;Name=treB;gbkey=Gene;gene=treB;gene_biotype=protein_coding;locus_tag=AD853_RS12985;old_locus_tag=ERS008462_02621 NZ_CPUY01000013.1 Protein Homology CDS 86231 87646 . + 0 ID=cds-WP_038823977.1;Parent=gene-AD853_RS12985;Dbxref=GenBank:WP_038823977.1;Name=WP_038823977.1;Ontology_term=GO:0009401,GO:0015771,GO:0008982,GO:0015574,GO:0016020;gbkey=CDS;gene=treB;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA,trehalose transmembrane transporter activity|0015574||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,trehalose transport|0015771||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011817268.1;locus_tag=AD853_RS12985;product=PTS trehalose transporter subunit IIBC;protein_id=WP_038823977.1;transl_table=11 NZ_CPUY01000013.1 RefSeq gene 87741 89402 . + . ID=gene-AD853_RS12990;Name=treC;gbkey=Gene;gene=treC;gene_biotype=protein_coding;locus_tag=AD853_RS12990;old_locus_tag=ERS008462_02622 NZ_CPUY01000013.1 Protein Homology CDS 87741 89402 . + 0 ID=cds-WP_012303487.1;Parent=gene-AD853_RS12990;Dbxref=GenBank:WP_012303487.1;Name=WP_012303487.1;Ontology_term=GO:0005991,GO:0008788,GO:0005737;gbkey=CDS;gene=treC;go_component=cytoplasm|0005737||IEA;go_function=alpha%2Calpha-phosphotrehalase activity|0008788||IEA;go_process=trehalose metabolic process|0005991||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210104.1;locus_tag=AD853_RS12990;product=alpha%2Calpha-phosphotrehalase;protein_id=WP_012303487.1;transl_table=11 NZ_CPUY01000013.1 RefSeq gene 89755 90165 . + . ID=gene-AD853_RS12995;Name=rnk;gbkey=Gene;gene=rnk;gene_biotype=protein_coding;locus_tag=AD853_RS12995;old_locus_tag=ERS008462_02623 NZ_CPUY01000013.1 Protein Homology CDS 89755 90165 . + 0 ID=cds-WP_002210103.1;Parent=gene-AD853_RS12995;Dbxref=GenBank:WP_002210103.1;Name=WP_002210103.1;Ontology_term=GO:0032784,GO:0003677,GO:0070063;gbkey=CDS;gene=rnk;go_function=DNA binding|0003677||IEA,RNA polymerase binding|0070063||IEA;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210103.1;locus_tag=AD853_RS12995;product=nucleoside diphosphate kinase regulator;protein_id=WP_002210103.1;transl_table=11 NZ_CPUY01000013.1 RefSeq gene 90397 90783 . - . ID=gene-AD853_RS13000;Name=cybC;gbkey=Gene;gene=cybC;gene_biotype=protein_coding;locus_tag=AD853_RS13000;old_locus_tag=ERS008462_02624 NZ_CPUY01000013.1 Protein Homology CDS 90397 90783 . - 0 ID=cds-WP_002210102.1;Parent=gene-AD853_RS13000;Dbxref=GenBank:WP_002210102.1;Name=WP_002210102.1;Ontology_term=GO:0022900,GO:0005506,GO:0009055,GO:0042597;gbkey=CDS;gene=cybC;go_component=periplasmic space|0042597||IEA;go_function=iron ion binding|0005506||IEA,electron transfer activity|0009055||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210102.1;locus_tag=AD853_RS13000;product=cytochrome b562;protein_id=WP_002210102.1;transl_table=11 NZ_CPUY01000013.1 RefSeq gene 90997 92337 . - . ID=gene-AD853_RS13005;Name=pmbA;gbkey=Gene;gene=pmbA;gene_biotype=protein_coding;locus_tag=AD853_RS13005;old_locus_tag=ERS008462_02625 NZ_CPUY01000013.1 Protein Homology CDS 90997 92337 . - 0 ID=cds-WP_011193152.1;Parent=gene-AD853_RS13005;Dbxref=GenBank:WP_011193152.1;Name=WP_011193152.1;Ontology_term=GO:0006508,GO:0008237;gbkey=CDS;gene=pmbA;go_function=metallopeptidase activity|0008237||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011193152.1;locus_tag=AD853_RS13005;product=metalloprotease PmbA;protein_id=WP_011193152.1;transl_table=11 NZ_CPUY01000013.1 RefSeq gene 92518 93066 . + . ID=gene-AD853_RS13010;Name=yjgA;gbkey=Gene;gene=yjgA;gene_biotype=protein_coding;locus_tag=AD853_RS13010;old_locus_tag=ERS008462_02626 NZ_CPUY01000013.1 Protein Homology CDS 92518 93066 . + 0 ID=cds-WP_011193153.1;Parent=gene-AD853_RS13010;Dbxref=GenBank:WP_011193153.1;Name=WP_011193153.1;Ontology_term=GO:0042254;gbkey=CDS;gene=yjgA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210099.1;locus_tag=AD853_RS13010;product=ribosome biogenesis factor YjgA;protein_id=WP_011193153.1;transl_table=11 NZ_CPUY01000013.1 RefSeq gene 93197 93478 . - . ID=gene-AD853_RS13015;Name=AD853_RS13015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS13015;old_locus_tag=ERS008462_02627 NZ_CPUY01000013.1 Protein Homology CDS 93197 93478 . - 0 ID=cds-WP_002210098.1;Parent=gene-AD853_RS13015;Dbxref=GenBank:WP_002210098.1;Name=WP_002210098.1;Ontology_term=GO:0046983;gbkey=CDS;go_function=protein dimerization activity|0046983||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210098.1;locus_tag=AD853_RS13015;product=barstar family protein;protein_id=WP_002210098.1;transl_table=11 NZ_CPUY01000013.1 RefSeq gene 93483 93956 . - . ID=gene-AD853_RS13020;Name=AD853_RS13020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS13020;old_locus_tag=ERS008462_02628 NZ_CPUY01000013.1 Protein Homology CDS 93483 93956 . - 0 ID=cds-WP_038825158.1;Parent=gene-AD853_RS13020;Dbxref=GenBank:WP_038825158.1;Name=WP_038825158.1;Ontology_term=GO:0003723,GO:0004521;gbkey=CDS;go_function=RNA binding|0003723||IEA,RNA endonuclease activity|0004521||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002214288.1;locus_tag=AD853_RS13020;product=ribonuclease;protein_id=WP_038825158.1;transl_table=11 NZ_CPUY01000013.1 RefSeq gene 94151 95620 . - . ID=gene-AD853_RS13025;Name=AD853_RS13025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS13025;old_locus_tag=ERS008462_02630 NZ_CPUY01000013.1 Protein Homology CDS 94151 95620 . - 0 ID=cds-WP_011193154.1;Parent=gene-AD853_RS13025;Dbxref=GenBank:WP_011193154.1;Name=WP_011193154.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011193154.1;locus_tag=AD853_RS13025;product=NAD-dependent succinate-semialdehyde dehydrogenase;protein_id=WP_011193154.1;transl_table=11 NZ_CPUY01000013.1 RefSeq gene 95887 97842 . - . ID=gene-AD853_RS13030;Name=aaeB;gbkey=Gene;gene=aaeB;gene_biotype=protein_coding;locus_tag=AD853_RS13030;old_locus_tag=ERS008462_02631 NZ_CPUY01000013.1 Protein Homology CDS 95887 97842 . - 0 ID=cds-WP_038825167.1;Parent=gene-AD853_RS13030;Dbxref=GenBank:WP_038825167.1;Name=WP_038825167.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=aaeB;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014462485.1;locus_tag=AD853_RS13030;product=p-hydroxybenzoic acid efflux pump subunit AaeB;protein_id=WP_038825167.1;transl_table=11 NZ_CPUY01000013.1 RefSeq gene 97844 98779 . - . ID=gene-AD853_RS13035;Name=aaeA;gbkey=Gene;gene=aaeA;gene_biotype=protein_coding;locus_tag=AD853_RS13035;old_locus_tag=ERS008462_02632 NZ_CPUY01000013.1 Protein Homology CDS 97844 98779 . - 0 ID=cds-WP_002210094.1;Parent=gene-AD853_RS13035;Dbxref=GenBank:WP_002210094.1;Name=WP_002210094.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=aaeA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013650497.1;locus_tag=AD853_RS13035;product=p-hydroxybenzoic acid efflux pump subunit AaeA;protein_id=WP_002210094.1;transl_table=11 NZ_CPUY01000013.1 RefSeq gene 98787 98990 . - . ID=gene-AD853_RS13040;Name=aaeX;gbkey=Gene;gene=aaeX;gene_biotype=protein_coding;locus_tag=AD853_RS13040;old_locus_tag=ERS008462_02633 NZ_CPUY01000013.1 Protein Homology CDS 98787 98990 . - 0 ID=cds-WP_002210093.1;Parent=gene-AD853_RS13040;Dbxref=GenBank:WP_002210093.1;Name=WP_002210093.1;gbkey=CDS;gene=aaeX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005174323.1;locus_tag=AD853_RS13040;product=p-hydroxybenzoic acid efflux pump operon protein AaeX;protein_id=WP_002210093.1;transl_table=11 NZ_CPUY01000013.1 RefSeq gene 99293 100204 . + . ID=gene-AD853_RS13045;Name=aaeR;gbkey=Gene;gene=aaeR;gene_biotype=protein_coding;locus_tag=AD853_RS13045;old_locus_tag=ERS008462_02634 NZ_CPUY01000013.1 Protein Homology CDS 99293 100204 . + 0 ID=cds-WP_012104409.1;Parent=gene-AD853_RS13045;Dbxref=GenBank:WP_012104409.1;Name=WP_012104409.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=aaeR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012414054.1;locus_tag=AD853_RS13045;product=HTH-type transcriptional activator AaeR;protein_id=WP_012104409.1;transl_table=11 NZ_CPUY01000013.1 RefSeq gene 100466 101353 . + . ID=gene-AD853_RS13050;Name=AD853_RS13050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS13050;old_locus_tag=ERS008462_02635 NZ_CPUY01000013.1 Protein Homology CDS 100466 101353 . + 0 ID=cds-WP_012104408.1;Parent=gene-AD853_RS13050;Dbxref=GenBank:WP_012104408.1;Name=WP_012104408.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012104408.1;locus_tag=AD853_RS13050;product=LysR family transcriptional regulator;protein_id=WP_012104408.1;transl_table=11 NZ_CPUY01000013.1 RefSeq gene 101615 103804 . + . ID=gene-AD853_RS13055;Name=AD853_RS13055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS13055;old_locus_tag=ERS008462_02636 NZ_CPUY01000013.1 Protein Homology CDS 101615 103804 . + 0 ID=cds-WP_404975823.1;Parent=gene-AD853_RS13055;Dbxref=GenBank:WP_404975823.1;Name=WP_404975823.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011193157.1;locus_tag=AD853_RS13055;product=Tc toxin subunit A;protein_id=WP_404975823.1;transl_table=11 NZ_CPUY01000013.1 RefSeq pseudogene 103885 104118 . + . ID=gene-AD853_RS22695;Name=AD853_RS22695;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD853_RS22695;partial=true;pseudo=true;start_range=.,103885 NZ_CPUY01000013.1 Protein Homology CDS 103885 104118 . + 0 ID=cds-AD853_RS22695;Parent=gene-AD853_RS22695;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011193157.1;locus_tag=AD853_RS22695;partial=true;product=hypothetical protein;pseudo=true;start_range=.,103885;transl_table=11 NZ_CPUY01000013.1 RefSeq gene 104158 107751 . + . ID=gene-AD853_RS22510;Name=AD853_RS22510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS22510;old_locus_tag=ERS008462_02637 NZ_CPUY01000013.1 Protein Homology CDS 104158 107751 . + 0 ID=cds-WP_038825469.1;Parent=gene-AD853_RS22510;Dbxref=GenBank:WP_038825469.1;Name=WP_038825469.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012303483.1;locus_tag=AD853_RS22510;product=Tc toxin subunit A-related protein;protein_id=WP_038825469.1;transl_table=11 NZ_CPUY01000013.1 RefSeq pseudogene 107809 112250 . + . ID=gene-AD853_RS13065;Name=AD853_RS13065;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD853_RS13065;old_locus_tag=ERS008462_02638;pseudo=true NZ_CPUY01000013.1 Protein Homology CDS 107809 112250 . + 0 ID=cds-AD853_RS13065;Parent=gene-AD853_RS13065;Note=frameshifted;Ontology_term=GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210089.1;locus_tag=AD853_RS13065;product=SpvB/TcaC N-terminal domain-containing protein;pseudo=true;transl_table=11 NZ_CPUY01000013.1 RefSeq gene 112384 112686 . + . ID=gene-AD853_RS13070;Name=AD853_RS13070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS13070;old_locus_tag=ERS008462_02640 NZ_CPUY01000013.1 Protein Homology CDS 112384 112686 . + 0 ID=cds-WP_002214300.1;Parent=gene-AD853_RS13070;Dbxref=GenBank:WP_002214300.1;Name=WP_002214300.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002214300.1;locus_tag=AD853_RS13070;product=phage holin family protein;protein_id=WP_002214300.1;transl_table=11 NZ_CPUY01000013.1 RefSeq gene 112699 113100 . + . ID=gene-AD853_RS13075;Name=AD853_RS13075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS13075;old_locus_tag=ERS008462_02641 NZ_CPUY01000013.1 Protein Homology CDS 112699 113100 . + 0 ID=cds-WP_038825159.1;Parent=gene-AD853_RS13075;Dbxref=GenBank:WP_038825159.1;Name=WP_038825159.1;Ontology_term=GO:0071554,GO:0008233;gbkey=CDS;go_function=peptidase activity|0008233||IEA;go_process=cell wall organization or biogenesis|0071554||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210087.1;locus_tag=AD853_RS13075;product=M15 family metallopeptidase;protein_id=WP_038825159.1;transl_table=11 NZ_CPUY01000013.1 RefSeq gene 113097 113456 . + . ID=gene-AD853_RS13080;Name=AD853_RS13080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS13080;old_locus_tag=ERS008462_02642 NZ_CPUY01000013.1 Protein Homology CDS 113097 113456 . + 0 ID=cds-WP_038402037.1;Parent=gene-AD853_RS13080;Dbxref=GenBank:WP_038402037.1;Name=WP_038402037.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012414059.1;locus_tag=AD853_RS13080;product=hypothetical protein;protein_id=WP_038402037.1;transl_table=11 NZ_CPUY01000013.1 RefSeq gene 113443 113616 . + . ID=gene-AD853_RS22225;Name=lysC;gbkey=Gene;gene=lysC;gene_biotype=protein_coding;locus_tag=AD853_RS22225 NZ_CPUY01000013.1 Protein Homology CDS 113443 113616 . + 0 ID=cds-WP_011055211.1;Parent=gene-AD853_RS22225;Dbxref=GenBank:WP_011055211.1;Name=WP_011055211.1;gbkey=CDS;gene=lysC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210085.1;locus_tag=AD853_RS22225;product=Rz1-like lysis system protein LysC;protein_id=WP_011055211.1;transl_table=11 NZ_CPUY01000013.1 RefSeq gene 113701 116559 . + . ID=gene-AD853_RS13085;Name=AD853_RS13085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS13085;old_locus_tag=ERS008462_02643 NZ_CPUY01000013.1 Protein Homology CDS 113701 116559 . + 0 ID=cds-WP_038825160.1;Parent=gene-AD853_RS13085;Dbxref=GenBank:WP_038825160.1;Name=WP_038825160.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011193162.1;locus_tag=AD853_RS13085;product=RHS repeat protein;protein_id=WP_038825160.1;transl_table=11 NZ_CPUY01000013.1 RefSeq gene 116762 118207 . - . ID=gene-AD853_RS13090;Name=tldD;gbkey=Gene;gene=tldD;gene_biotype=protein_coding;locus_tag=AD853_RS13090;old_locus_tag=ERS008462_02644 NZ_CPUY01000013.1 Protein Homology CDS 116762 118207 . - 0 ID=cds-WP_012104397.1;Parent=gene-AD853_RS13090;Dbxref=GenBank:WP_012104397.1;Name=WP_012104397.1;Ontology_term=GO:0006508,GO:0008237;gbkey=CDS;gene=tldD;go_function=metallopeptidase activity|0008237||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229084.1;locus_tag=AD853_RS13090;product=metalloprotease TldD;protein_id=WP_012104397.1;transl_table=11 NZ_CPUY01000013.1 RefSeq gene 118219 119088 . - . ID=gene-AD853_RS13095;Name=nit1;gbkey=Gene;gene=nit1;gene_biotype=protein_coding;locus_tag=AD853_RS13095;old_locus_tag=ERS008462_02645 NZ_CPUY01000013.1 Protein Homology CDS 118219 119088 . - 0 ID=cds-WP_002210081.1;Parent=gene-AD853_RS13095;Dbxref=GenBank:WP_002210081.1;Name=WP_002210081.1;Ontology_term=GO:0008152,GO:0110050;gbkey=CDS;gene=nit1;go_function=deaminated glutathione amidase activity|0110050||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012303479.1;locus_tag=AD853_RS13095;product=deaminated glutathione amidase;protein_id=WP_002210081.1;transl_table=11 NZ_CPUY01000013.1 RefSeq gene 119085 123002 . - . ID=gene-AD853_RS13100;Name=yhdP;gbkey=Gene;gene=yhdP;gene_biotype=protein_coding;locus_tag=AD853_RS13100;old_locus_tag=ERS008462_02646 NZ_CPUY01000013.1 Protein Homology CDS 119085 123002 . - 0 ID=cds-WP_071990077.1;Parent=gene-AD853_RS13100;Dbxref=GenBank:WP_071990077.1;Name=WP_071990077.1;gbkey=CDS;gene=yhdP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210080.1;locus_tag=AD853_RS13100;product=AsmA2 domain-containing protein YhdP;protein_id=WP_071990077.1;transl_table=11 NZ_CPUY01000013.1 RefSeq gene 123096 124565 . - . ID=gene-AD853_RS13105;Name=rng;gbkey=Gene;gene=rng;gene_biotype=protein_coding;locus_tag=AD853_RS13105;old_locus_tag=ERS008462_02647 NZ_CPUY01000013.1 Protein Homology CDS 123096 124565 . - 0 ID=cds-WP_002210079.1;Parent=gene-AD853_RS13105;Dbxref=GenBank:WP_002210079.1;Name=WP_002210079.1;Ontology_term=GO:0006396,GO:0003723,GO:0004540;gbkey=CDS;gene=rng;go_function=RNA binding|0003723||IEA,RNA nuclease activity|0004540||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006818051.1;locus_tag=AD853_RS13105;product=ribonuclease G;protein_id=WP_002210079.1;transl_table=11 NZ_CPUY01000013.1 RefSeq gene 124555 125148 . - . ID=gene-AD853_RS13110;Name=AD853_RS13110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS13110;old_locus_tag=ERS008462_02648 NZ_CPUY01000013.1 Protein Homology CDS 124555 125148 . - 0 ID=cds-WP_038825163.1;Parent=gene-AD853_RS13110;Dbxref=GenBank:WP_038825163.1;Name=WP_038825163.1;Ontology_term=GO:0009117,GO:0009146,GO:0000166,GO:0047429;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,nucleoside triphosphate diphosphatase activity|0047429||IEA;go_process=nucleotide metabolic process|0009117||IEA,purine nucleoside triphosphate catabolic process|0009146||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210078.1;locus_tag=AD853_RS13110;product=Maf family protein;protein_id=WP_038825163.1;transl_table=11 NZ_CPUY01000013.1 RefSeq gene 125162 125650 . - . ID=gene-AD853_RS13115;Name=mreD;gbkey=Gene;gene=mreD;gene_biotype=protein_coding;locus_tag=AD853_RS13115;old_locus_tag=ERS008462_02649 NZ_CPUY01000013.1 Protein Homology CDS 125162 125650 . - 0 ID=cds-WP_002210077.1;Parent=gene-AD853_RS13115;Dbxref=GenBank:WP_002210077.1;Name=WP_002210077.1;gbkey=CDS;gene=mreD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210077.1;locus_tag=AD853_RS13115;product=rod shape-determining protein MreD;protein_id=WP_002210077.1;transl_table=11 NZ_CPUY01000013.1 RefSeq gene 125647 126642 . - . ID=gene-AD853_RS13120;Name=mreC;gbkey=Gene;gene=mreC;gene_biotype=protein_coding;locus_tag=AD853_RS13120;old_locus_tag=ERS008462_02650 NZ_CPUY01000013.1 Protein Homology CDS 125647 126642 . - 0 ID=cds-WP_002210076.1;Parent=gene-AD853_RS13120;Dbxref=GenBank:WP_002210076.1;Name=WP_002210076.1;Ontology_term=GO:0008360;gbkey=CDS;gene=mreC;go_process=regulation of cell shape|0008360||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210076.1;locus_tag=AD853_RS13120;product=rod shape-determining protein MreC;protein_id=WP_002210076.1;transl_table=11 NZ_CPUY01000013.1 RefSeq gene 126846 127889 . - . ID=gene-AD853_RS13125;Name=mreB;gbkey=Gene;gene=mreB;gene_biotype=protein_coding;locus_tag=AD853_RS13125;old_locus_tag=ERS008462_02651 NZ_CPUY01000013.1 Protein Homology CDS 126846 127889 . - 0 ID=cds-WP_002228205.1;Parent=gene-AD853_RS13125;Dbxref=GenBank:WP_002228205.1;Name=WP_002228205.1;gbkey=CDS;gene=mreB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000913396.1;locus_tag=AD853_RS13125;product=rod shape-determining protein MreB;protein_id=WP_002228205.1;transl_table=11 NZ_CPUY01000013.1 RefSeq gene 128226 130142 . - . ID=gene-AD853_RS13130;Name=csrD;gbkey=Gene;gene=csrD;gene_biotype=protein_coding;locus_tag=AD853_RS13130;old_locus_tag=ERS008462_02652 NZ_CPUY01000013.1 Protein Homology CDS 128226 130142 . - 0 ID=cds-WP_002210075.1;Parent=gene-AD853_RS13130;Dbxref=GenBank:WP_002210075.1;Name=WP_002210075.1;gbkey=CDS;gene=csrD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011193164.1;locus_tag=AD853_RS13130;product=RNase E specificity factor CsrD;protein_id=WP_002210075.1;transl_table=11 NZ_CPUY01000013.1 RefSeq gene 130543 131520 . + . ID=gene-AD853_RS13135;Name=acuI;gbkey=Gene;gene=acuI;gene_biotype=protein_coding;locus_tag=AD853_RS13135;old_locus_tag=ERS008462_02653 NZ_CPUY01000013.1 Protein Homology CDS 130543 131520 . + 0 ID=cds-WP_038825165.1;Parent=gene-AD853_RS13135;Dbxref=GenBank:WP_038825165.1;Name=WP_038825165.1;gbkey=CDS;gene=acuI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019080084.1;locus_tag=AD853_RS13135;product=acrylyl-CoA reductase (NADPH);protein_id=WP_038825165.1;transl_table=11 NZ_CPUY01000013.1 RefSeq gene 131743 132825 . + . ID=gene-AD853_RS13140;Name=msrP;gbkey=Gene;gene=msrP;gene_biotype=protein_coding;locus_tag=AD853_RS13140;old_locus_tag=ERS008462_02654 NZ_CPUY01000013.1 Protein Homology CDS 131743 132825 . + 0 ID=cds-WP_038825166.1;Parent=gene-AD853_RS13140;Dbxref=GenBank:WP_038825166.1;Name=WP_038825166.1;Ontology_term=GO:0030091,GO:0016667,GO:0043546;gbkey=CDS;gene=msrP;go_function=oxidoreductase activity%2C acting on a sulfur group of donors|0016667||IEA,molybdopterin cofactor binding|0043546||IEA;go_process=protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011906144.1;locus_tag=AD853_RS13140;product=protein-methionine-sulfoxide reductase catalytic subunit MsrP;protein_id=WP_038825166.1;transl_table=11 NZ_CPUY01000013.1 RefSeq gene 132825 133445 . + . ID=gene-AD853_RS13145;Name=msrQ;gbkey=Gene;gene=msrQ;gene_biotype=protein_coding;locus_tag=AD853_RS13145;old_locus_tag=ERS008462_02655 NZ_CPUY01000013.1 Protein Homology CDS 132825 133445 . + 0 ID=cds-WP_002210072.1;Parent=gene-AD853_RS13145;Dbxref=GenBank:WP_002210072.1;Name=WP_002210072.1;gbkey=CDS;gene=msrQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210072.1;locus_tag=AD853_RS13145;product=protein-methionine-sulfoxide reductase heme-binding subunit MsrQ;protein_id=WP_002210072.1;transl_table=11 NZ_CPUY01000013.1 RefSeq gene 133707 134159 . + . ID=gene-AD853_RS13150;Name=aroQ;gbkey=Gene;gene=aroQ;gene_biotype=protein_coding;locus_tag=AD853_RS13150;old_locus_tag=ERS008462_02656 NZ_CPUY01000013.1 Protein Homology CDS 133707 134159 . + 0 ID=cds-WP_002210071.1;Parent=gene-AD853_RS13150;Dbxref=GenBank:WP_002210071.1;Name=WP_002210071.1;Ontology_term=GO:0009423,GO:0003855;gbkey=CDS;gene=aroQ;go_function=3-dehydroquinate dehydratase activity|0003855||IEA;go_process=chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210071.1;locus_tag=AD853_RS13150;product=type II 3-dehydroquinate dehydratase;protein_id=WP_002210071.1;transl_table=11 NZ_CPUY01000013.1 RefSeq gene 134317 134781 . + . ID=gene-AD853_RS13155;Name=accB;gbkey=Gene;gene=accB;gene_biotype=protein_coding;locus_tag=AD853_RS13155;old_locus_tag=ERS008462_02657 NZ_CPUY01000013.1 Protein Homology CDS 134317 134781 . + 0 ID=cds-WP_002230506.1;Parent=gene-AD853_RS13155;Dbxref=GenBank:WP_002230506.1;Name=WP_002230506.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;gene=accB;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004392389.1;locus_tag=AD853_RS13155;product=acetyl-CoA carboxylase biotin carboxyl carrier protein;protein_id=WP_002230506.1;transl_table=11 NZ_CPUY01000013.1 RefSeq gene 134793 136142 . + . ID=gene-AD853_RS13160;Name=accC;gbkey=Gene;gene=accC;gene_biotype=protein_coding;locus_tag=AD853_RS13160;old_locus_tag=ERS008462_02658 NZ_CPUY01000013.1 Protein Homology CDS 134793 136142 . + 0 ID=cds-WP_012104390.1;Parent=gene-AD853_RS13160;Dbxref=GenBank:WP_012104390.1;Name=WP_012104390.1;Ontology_term=GO:0004075,GO:0016874,GO:0009317;gbkey=CDS;gene=accC;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=biotin carboxylase activity|0004075||IEA,ligase activity|0016874||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011817284.1;locus_tag=AD853_RS13160;product=acetyl-CoA carboxylase biotin carboxylase subunit;protein_id=WP_012104390.1;transl_table=11 NZ_CPUY01000013.1 RefSeq gene 136388 136564 . - . ID=gene-AD853_RS21855;Name=AD853_RS21855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS21855;old_locus_tag=ERS008462_02659 NZ_CPUY01000013.1 Protein Homology CDS 136388 136564 . - 0 ID=cds-WP_190947793.1;Parent=gene-AD853_RS21855;Dbxref=GenBank:WP_190947793.1;Name=WP_190947793.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012414060.1;locus_tag=AD853_RS21855;product=hypothetical protein;protein_id=WP_190947793.1;transl_table=11 NZ_CPUY01000013.1 RefSeq gene 137255 137497 . + . ID=gene-AD853_RS13165;Name=AD853_RS13165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS13165;old_locus_tag=ERS008462_02660 NZ_CPUY01000013.1 Protein Homology CDS 137255 137497 . + 0 ID=cds-WP_002210066.1;Parent=gene-AD853_RS13165;Dbxref=GenBank:WP_002210066.1;Name=WP_002210066.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210066.1;locus_tag=AD853_RS13165;product=YhdT family protein;protein_id=WP_002210066.1;transl_table=11 NZ_CPUY01000013.1 RefSeq gene 137487 138941 . + . ID=gene-AD853_RS13170;Name=panF;gbkey=Gene;gene=panF;gene_biotype=protein_coding;locus_tag=AD853_RS13170;old_locus_tag=ERS008462_02661 NZ_CPUY01000013.1 Protein Homology CDS 137487 138941 . + 0 ID=cds-WP_033851486.1;Parent=gene-AD853_RS13170;Dbxref=GenBank:WP_033851486.1;Name=WP_033851486.1;Ontology_term=GO:0015887,GO:0036376,GO:0015081,GO:0015233,GO:0016020;gbkey=CDS;gene=panF;go_component=membrane|0016020||IEA;go_function=sodium ion transmembrane transporter activity|0015081||IEA,pantothenate transmembrane transporter activity|0015233||IEA;go_process=pantothenate transmembrane transport|0015887||IEA,sodium ion export across plasma membrane|0036376||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210065.1;locus_tag=AD853_RS13170;product=sodium/pantothenate symporter;protein_id=WP_033851486.1;transl_table=11 NZ_CPUY01000013.1 RefSeq gene 139017 139898 . + . ID=gene-AD853_RS13175;Name=prmA;gbkey=Gene;gene=prmA;gene_biotype=protein_coding;locus_tag=AD853_RS13175;old_locus_tag=ERS008462_02662 NZ_CPUY01000013.1 Protein Homology CDS 139017 139898 . + 0 ID=cds-WP_002220963.1;Parent=gene-AD853_RS13175;Dbxref=GenBank:WP_002220963.1;Name=WP_002220963.1;Ontology_term=GO:0036211,GO:0008757;gbkey=CDS;gene=prmA;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005163101.1;locus_tag=AD853_RS13175;product=50S ribosomal protein L11 methyltransferase;protein_id=WP_002220963.1;transl_table=11 NZ_CPUY01000013.1 RefSeq gene 140504 141469 . + . ID=gene-AD853_RS13180;Name=dusB;gbkey=Gene;gene=dusB;gene_biotype=protein_coding;locus_tag=AD853_RS13180;old_locus_tag=ERS008462_02663 NZ_CPUY01000013.1 Protein Homology CDS 140504 141469 . + 0 ID=cds-WP_002210062.1;Parent=gene-AD853_RS13180;Dbxref=GenBank:WP_002210062.1;Name=WP_002210062.1;Ontology_term=GO:0008033,GO:0017150,GO:0050660;gbkey=CDS;gene=dusB;go_function=tRNA dihydrouridine synthase activity|0017150||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008785970.1;locus_tag=AD853_RS13180;product=tRNA dihydrouridine synthase DusB;protein_id=WP_002210062.1;transl_table=11 NZ_CPUY01000013.1 RefSeq gene 141494 141790 . + . ID=gene-AD853_RS13185;Name=fis;gbkey=Gene;gene=fis;gene_biotype=protein_coding;locus_tag=AD853_RS13185;old_locus_tag=ERS008462_02664 NZ_CPUY01000013.1 Protein Homology CDS 141494 141790 . + 0 ID=cds-WP_002210061.1;Parent=gene-AD853_RS13185;Dbxref=GenBank:WP_002210061.1;Name=WP_002210061.1;gbkey=CDS;gene=fis;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001465625.1;locus_tag=AD853_RS13185;product=DNA-binding transcriptional regulator Fis;protein_id=WP_002210061.1;transl_table=11 NZ_CPUY01000013.1 RefSeq gene 141874 142050 . - . ID=gene-AD853_RS13190;Name=AD853_RS13190;end_range=142050,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS13190;partial=true NZ_CPUY01000013.1 Protein Homology CDS 141874 142050 . - 0 ID=cds-WP_050124608.1;Parent=gene-AD853_RS13190;Dbxref=GenBank:WP_050124608.1;Name=WP_050124608.1;end_range=142050,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002426667.1;locus_tag=AD853_RS13190;partial=true;product=terminase small subunit;protein_id=WP_050124608.1;transl_table=11 ##sequence-region NZ_CPUY01000014.1 1 135158 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=633 NZ_CPUY01000014.1 RefSeq region 1 135158 . + . ID=NZ_CPUY01000014.1:1..135158;Dbxref=taxon:633;collection-date=1900/2008;country=South Africa;gbkey=Src;genome=genomic;isolation-source=not known;mol_type=genomic DNA;nat-host=pig;serovar=O:3;strain=IP32544 NZ_CPUY01000014.1 RefSeq pseudogene 1 4766 . + . ID=gene-AD853_RS13200;Name=AD853_RS13200;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD853_RS13200;old_locus_tag=ERS008462_02666;partial=true;pseudo=true;start_range=.,1 NZ_CPUY01000014.1 Protein Homology CDS 1 4766 . + 1 ID=cds-AD853_RS13200;Parent=gene-AD853_RS13200;Note=frameshifted%3B incomplete%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012303376.1;locus_tag=AD853_RS13200;partial=true;product=beta strand repeat-containing protein;pseudo=true;start_range=.,1;transl_table=11 NZ_CPUY01000014.1 RefSeq gene 5008 6705 . - . ID=gene-AD853_RS13205;Name=AD853_RS13205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS13205;old_locus_tag=ERS008462_02667 NZ_CPUY01000014.1 Protein Homology CDS 5008 6705 . - 0 ID=cds-WP_038824992.1;Parent=gene-AD853_RS13205;Dbxref=GenBank:WP_038824992.1;Name=WP_038824992.1;Ontology_term=GO:0000160,GO:0071555,GO:0000155,GO:0004673,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105902.1;locus_tag=AD853_RS13205;product=sensor histidine kinase;protein_id=WP_038824992.1;transl_table=11 NZ_CPUY01000014.1 RefSeq gene 7210 9393 . + . ID=gene-AD853_RS13210;Name=glgB;gbkey=Gene;gene=glgB;gene_biotype=protein_coding;locus_tag=AD853_RS13210;old_locus_tag=ERS008462_02668 NZ_CPUY01000014.1 Protein Homology CDS 7210 9393 . + 0 ID=cds-WP_002209500.1;Parent=gene-AD853_RS13210;Dbxref=GenBank:WP_002209500.1;Name=WP_002209500.1;Ontology_term=GO:0005975,GO:0005978,GO:0003844,GO:0004553,GO:0043169;gbkey=CDS;gene=glgB;go_function=1%2C4-alpha-glucan branching enzyme activity|0003844||IEA,hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA,cation binding|0043169||IEA;go_process=carbohydrate metabolic process|0005975||IEA,glycogen biosynthetic process|0005978||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011193251.1;locus_tag=AD853_RS13210;product=1%2C4-alpha-glucan branching protein GlgB;protein_id=WP_002209500.1;transl_table=11 NZ_CPUY01000014.1 RefSeq gene 9395 11383 . + . ID=gene-AD853_RS13215;Name=glgX;gbkey=Gene;gene=glgX;gene_biotype=protein_coding;locus_tag=AD853_RS13215;old_locus_tag=ERS008462_02669 NZ_CPUY01000014.1 Protein Homology CDS 9395 11383 . + 0 ID=cds-WP_011193250.1;Parent=gene-AD853_RS13215;Dbxref=GenBank:WP_011193250.1;Name=WP_011193250.1;Ontology_term=GO:0005980,GO:0120549;gbkey=CDS;gene=glgX;go_function=limit dextrin alpha-1%2C6-maltotetraose-hydrolase activity|0120549||IEA;go_process=glycogen catabolic process|0005980||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002408599.1;locus_tag=AD853_RS13215;product=glycogen debranching protein GlgX;protein_id=WP_011193250.1;transl_table=11 NZ_CPUY01000014.1 RefSeq gene 11393 12679 . + . ID=gene-AD853_RS13220;Name=glgC;gbkey=Gene;gene=glgC;gene_biotype=protein_coding;locus_tag=AD853_RS13220;old_locus_tag=ERS008462_02670 NZ_CPUY01000014.1 Protein Homology CDS 11393 12679 . + 0 ID=cds-WP_012105899.1;Parent=gene-AD853_RS13220;Dbxref=GenBank:WP_012105899.1;Name=WP_012105899.1;Ontology_term=GO:0005978,GO:0008878;gbkey=CDS;gene=glgC;go_function=glucose-1-phosphate adenylyltransferase activity|0008878||IEA;go_process=glycogen biosynthetic process|0005978||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019084100.1;locus_tag=AD853_RS13220;product=glucose-1-phosphate adenylyltransferase;protein_id=WP_012105899.1;transl_table=11 NZ_CPUY01000014.1 RefSeq gene 12890 14320 . + . ID=gene-AD853_RS13225;Name=glgA;gbkey=Gene;gene=glgA;gene_biotype=protein_coding;locus_tag=AD853_RS13225;old_locus_tag=ERS008462_02671 NZ_CPUY01000014.1 Protein Homology CDS 12890 14320 . + 0 ID=cds-WP_038824989.1;Parent=gene-AD853_RS13225;Dbxref=GenBank:WP_038824989.1;Name=WP_038824989.1;Ontology_term=GO:0004373;gbkey=CDS;gene=glgA;go_function=alpha-1%2C4-glucan glucosyltransferase (UDP-glucose donor) activity|0004373||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005174770.1;locus_tag=AD853_RS13225;product=glycogen synthase GlgA;protein_id=WP_038824989.1;transl_table=11 NZ_CPUY01000014.1 RefSeq gene 14537 16984 . + . ID=gene-AD853_RS13230;Name=glgP;gbkey=Gene;gene=glgP;gene_biotype=protein_coding;locus_tag=AD853_RS13230;old_locus_tag=ERS008462_02672 NZ_CPUY01000014.1 Protein Homology CDS 14537 16984 . + 0 ID=cds-WP_011193248.1;Parent=gene-AD853_RS13230;Dbxref=GenBank:WP_011193248.1;Name=WP_011193248.1;Ontology_term=GO:0005975,GO:0008184;gbkey=CDS;gene=glgP;go_function=glycogen phosphorylase activity|0008184||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013060332.1;locus_tag=AD853_RS13230;product=glycogen phosphorylase;protein_id=WP_011193248.1;transl_table=11 NZ_CPUY01000014.1 RefSeq gene 17146 18660 . - . ID=gene-AD853_RS13235;Name=glpD;gbkey=Gene;gene=glpD;gene_biotype=protein_coding;locus_tag=AD853_RS13235;old_locus_tag=ERS008462_02673 NZ_CPUY01000014.1 Protein Homology CDS 17146 18660 . - 0 ID=cds-WP_038825193.1;Parent=gene-AD853_RS13235;Dbxref=GenBank:WP_038825193.1;Name=WP_038825193.1;Ontology_term=GO:0006072,GO:0004368,GO:0009331;gbkey=CDS;gene=glpD;go_component=glycerol-3-phosphate dehydrogenase (FAD) complex|0009331||IEA;go_function=glycerol-3-phosphate dehydrogenase (quinone) activity|0004368||IEA;go_process=glycerol-3-phosphate metabolic process|0006072||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004699669.1;locus_tag=AD853_RS13235;product=glycerol-3-phosphate dehydrogenase;protein_id=WP_038825193.1;transl_table=11 NZ_CPUY01000014.1 RefSeq pseudogene 19597 19758 . + . ID=gene-AD853_RS20725;Name=AD853_RS20725;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD853_RS20725;partial=true;pseudo=true;start_range=.,19597 NZ_CPUY01000014.1 Protein Homology CDS 19597 19758 . + 0 ID=cds-AD853_RS20725;Parent=gene-AD853_RS20725;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002230570.1;locus_tag=AD853_RS20725;partial=true;product=DUF3289 family protein;pseudo=true;start_range=.,19597;transl_table=11 NZ_CPUY01000014.1 RefSeq gene 19742 20206 . + . ID=gene-AD853_RS13245;Name=AD853_RS13245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS13245;old_locus_tag=ERS008462_02675 NZ_CPUY01000014.1 Protein Homology CDS 19742 20206 . + 0 ID=cds-WP_011193247.1;Parent=gene-AD853_RS13245;Dbxref=GenBank:WP_011193247.1;Name=WP_011193247.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011193247.1;locus_tag=AD853_RS13245;product=DUF943 family protein;protein_id=WP_011193247.1;transl_table=11 NZ_CPUY01000014.1 RefSeq gene 20372 20641 . + . ID=gene-AD853_RS13250;Name=AD853_RS13250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS13250;old_locus_tag=ERS008462_02676 NZ_CPUY01000014.1 Protein Homology CDS 20372 20641 . + 0 ID=cds-WP_002209494.1;Parent=gene-AD853_RS13250;Dbxref=GenBank:WP_002209494.1;Name=WP_002209494.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209494.1;locus_tag=AD853_RS13250;product=hypothetical protein;protein_id=WP_002209494.1;transl_table=11 NZ_CPUY01000014.1 RefSeq gene 21085 21843 . - . ID=gene-AD853_RS13255;Name=AD853_RS13255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS13255;old_locus_tag=ERS008462_02677 NZ_CPUY01000014.1 Protein Homology CDS 21085 21843 . - 0 ID=cds-WP_002208930.1;Parent=gene-AD853_RS13255;Dbxref=GenBank:WP_002208930.1;Name=WP_002208930.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009635717.1;locus_tag=AD853_RS13255;product=DeoR/GlpR family transcriptional regulator;protein_id=WP_002208930.1;transl_table=11 NZ_CPUY01000014.1 RefSeq gene 21878 22714 . - . ID=gene-AD853_RS13260;Name=glpG;gbkey=Gene;gene=glpG;gene_biotype=protein_coding;locus_tag=AD853_RS13260;old_locus_tag=ERS008462_02678 NZ_CPUY01000014.1 Protein Homology CDS 21878 22714 . - 0 ID=cds-WP_038400760.1;Parent=gene-AD853_RS13260;Dbxref=GenBank:WP_038400760.1;Name=WP_038400760.1;Ontology_term=GO:0006508,GO:0004252,GO:0016020;gbkey=CDS;gene=glpG;go_component=membrane|0016020||IEA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016261743.1;locus_tag=AD853_RS13260;product=rhomboid family intramembrane serine protease GlpG;protein_id=WP_038400760.1;transl_table=11 NZ_CPUY01000014.1 RefSeq gene 22732 23061 . - . ID=gene-AD853_RS13265;Name=glpE;gbkey=Gene;gene=glpE;gene_biotype=protein_coding;locus_tag=AD853_RS13265;old_locus_tag=ERS008462_02679 NZ_CPUY01000014.1 Protein Homology CDS 22732 23061 . - 0 ID=cds-WP_002218928.1;Parent=gene-AD853_RS13265;Dbxref=GenBank:WP_002218928.1;Name=WP_002218928.1;Ontology_term=GO:0004792;gbkey=CDS;gene=glpE;go_function=thiosulfate-cyanide sulfurtransferase activity|0004792||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208928.1;locus_tag=AD853_RS13265;product=thiosulfate sulfurtransferase GlpE;protein_id=WP_002218928.1;transl_table=11 NZ_CPUY01000014.1 RefSeq gene 23435 26146 . - . ID=gene-AD853_RS13270;Name=malT;gbkey=Gene;gene=malT;gene_biotype=protein_coding;locus_tag=AD853_RS13270;old_locus_tag=ERS008462_02680 NZ_CPUY01000014.1 Protein Homology CDS 23435 26146 . - 0 ID=cds-WP_038824524.1;Parent=gene-AD853_RS13270;Dbxref=GenBank:WP_038824524.1;Name=WP_038824524.1;Ontology_term=GO:0006355,GO:0003677,GO:0005515;gbkey=CDS;gene=malT;go_function=DNA binding|0003677||IEA,protein binding|0005515||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019081554.1;locus_tag=AD853_RS13270;product=HTH-type transcriptional regulator MalT;protein_id=WP_038824524.1;transl_table=11 NZ_CPUY01000014.1 RefSeq gene 26464 28869 . + . ID=gene-AD853_RS13275;Name=malP;gbkey=Gene;gene=malP;gene_biotype=protein_coding;locus_tag=AD853_RS13275;old_locus_tag=ERS008462_02681 NZ_CPUY01000014.1 Protein Homology CDS 26464 28869 . + 0 ID=cds-WP_012105894.1;Parent=gene-AD853_RS13275;Dbxref=GenBank:WP_012105894.1;Name=WP_012105894.1;Ontology_term=GO:0005975,GO:0008184,GO:0030170;gbkey=CDS;gene=malP;go_function=glycogen phosphorylase activity|0008184||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012147311.1;locus_tag=AD853_RS13275;product=maltodextrin phosphorylase;protein_id=WP_012105894.1;transl_table=11 NZ_CPUY01000014.1 RefSeq gene 28882 30978 . + . ID=gene-AD853_RS13280;Name=malQ;gbkey=Gene;gene=malQ;gene_biotype=protein_coding;locus_tag=AD853_RS13280;old_locus_tag=ERS008462_02682 NZ_CPUY01000014.1 Protein Homology CDS 28882 30978 . + 0 ID=cds-WP_002208925.1;Parent=gene-AD853_RS13280;Dbxref=GenBank:WP_002208925.1;Name=WP_002208925.1;Ontology_term=GO:0005975,GO:0004134;gbkey=CDS;gene=malQ;go_function=4-alpha-glucanotransferase activity|0004134||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208925.1;locus_tag=AD853_RS13280;product=4-alpha-glucanotransferase;protein_id=WP_002208925.1;transl_table=11 NZ_CPUY01000014.1 RefSeq gene 31163 31738 . - . ID=gene-AD853_RS13285;Name=nfuA;gbkey=Gene;gene=nfuA;gene_biotype=protein_coding;locus_tag=AD853_RS13285;old_locus_tag=ERS008462_02683 NZ_CPUY01000014.1 Protein Homology CDS 31163 31738 . - 0 ID=cds-WP_002208924.1;Parent=gene-AD853_RS13285;Dbxref=GenBank:WP_002208924.1;Name=WP_002208924.1;Ontology_term=GO:0016226,GO:0051604,GO:0051539;gbkey=CDS;gene=nfuA;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA,protein maturation|0051604||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016942932.1;locus_tag=AD853_RS13285;product=Fe-S biogenesis protein NfuA;protein_id=WP_002208924.1;transl_table=11 NZ_CPUY01000014.1 RefSeq gene 31798 32499 . - . ID=gene-AD853_RS13290;Name=gntX;gbkey=Gene;gene=gntX;gene_biotype=protein_coding;locus_tag=AD853_RS13290;old_locus_tag=ERS008462_02684 NZ_CPUY01000014.1 Protein Homology CDS 31798 32499 . - 0 ID=cds-WP_002208923.1;Parent=gene-AD853_RS13290;Dbxref=GenBank:WP_002208923.1;Name=WP_002208923.1;Ontology_term=GO:0009116;gbkey=CDS;gene=gntX;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208923.1;locus_tag=AD853_RS13290;product=DNA utilization protein GntX;protein_id=WP_002208923.1;transl_table=11 NZ_CPUY01000014.1 RefSeq gene 32586 33362 . + . ID=gene-AD853_RS13295;Name=bioH;gbkey=Gene;gene=bioH;gene_biotype=protein_coding;locus_tag=AD853_RS13295;old_locus_tag=ERS008462_02685 NZ_CPUY01000014.1 Protein Homology CDS 32586 33362 . + 0 ID=cds-WP_038824523.1;Parent=gene-AD853_RS13295;Dbxref=GenBank:WP_038824523.1;Name=WP_038824523.1;Ontology_term=GO:0009102,GO:0052689;gbkey=CDS;gene=bioH;go_function=carboxylic ester hydrolase activity|0052689||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016588104.1;locus_tag=AD853_RS13295;product=pimeloyl-ACP methyl ester esterase BioH;protein_id=WP_038824523.1;transl_table=11 NZ_CPUY01000014.1 RefSeq gene 33532 33801 . + . ID=gene-AD853_RS13300;Name=AD853_RS13300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS13300;old_locus_tag=ERS008462_02686 NZ_CPUY01000014.1 Protein Homology CDS 33532 33801 . + 0 ID=cds-WP_002208921.1;Parent=gene-AD853_RS13300;Dbxref=GenBank:WP_002208921.1;Name=WP_002208921.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208921.1;locus_tag=AD853_RS13300;product=YdgH/BhsA/McbA family protein;protein_id=WP_002208921.1;transl_table=11 NZ_CPUY01000014.1 RefSeq gene 33939 34196 . - . ID=gene-AD853_RS13305;Name=AD853_RS13305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS13305;old_locus_tag=ERS008462_02687 NZ_CPUY01000014.1 Protein Homology CDS 33939 34196 . - 0 ID=cds-WP_002208920.1;Parent=gene-AD853_RS13305;Dbxref=GenBank:WP_002208920.1;Name=WP_002208920.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208920.1;locus_tag=AD853_RS13305;product=FeoC-like transcriptional regulator;protein_id=WP_002208920.1;transl_table=11 NZ_CPUY01000014.1 RefSeq pseudogene 34232 36548 . - . ID=gene-AD853_RS13310;Name=feoB;gbkey=Gene;gene=feoB;gene_biotype=pseudogene;locus_tag=AD853_RS13310;pseudo=true NZ_CPUY01000014.1 Protein Homology CDS 34232 36548 . - 0 ID=cds-AD853_RS13310;Parent=gene-AD853_RS13310;Note=frameshifted;Ontology_term=GO:0006826,GO:0005525,GO:0015093,GO:0016020;gbkey=CDS;gene=feoB;go_component=membrane|0016020||IEA;go_function=GTP binding|0005525||IEA,ferrous iron transmembrane transporter activity|0015093||IEA;go_process=iron ion transport|0006826||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011906130.1;locus_tag=AD853_RS13310;product=Fe(2+) transporter permease subunit FeoB;pseudo=true;transl_table=11 NZ_CPUY01000014.1 RefSeq gene 36640 36867 . - . ID=gene-AD853_RS13315;Name=feoA;gbkey=Gene;gene=feoA;gene_biotype=protein_coding;locus_tag=AD853_RS13315;old_locus_tag=ERS008462_02690 NZ_CPUY01000014.1 Protein Homology CDS 36640 36867 . - 0 ID=cds-WP_002208918.1;Parent=gene-AD853_RS13315;Dbxref=GenBank:WP_002208918.1;Name=WP_002208918.1;gbkey=CDS;gene=feoA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208918.1;locus_tag=AD853_RS13315;product=ferrous iron transporter A;protein_id=WP_002208918.1;transl_table=11 NZ_CPUY01000014.1 RefSeq gene 37391 39766 . - . ID=gene-AD853_RS13325;Name=AD853_RS13325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS13325;old_locus_tag=ERS008462_02691 NZ_CPUY01000014.1 Protein Homology CDS 37391 39766 . - 0 ID=cds-WP_011193241.1;Parent=gene-AD853_RS13325;Dbxref=GenBank:WP_011193241.1;Name=WP_011193241.1;Ontology_term=GO:0003676,GO:0003729,GO:0005829;gbkey=CDS;go_component=cytosol|0005829||IEA;go_function=nucleic acid binding|0003676||IEA,mRNA binding|0003729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208916.1;locus_tag=AD853_RS13325;product=Tex family protein;protein_id=WP_011193241.1;transl_table=11 NZ_CPUY01000014.1 RefSeq gene 40300 40815 . + . ID=gene-AD853_RS13330;Name=greB;gbkey=Gene;gene=greB;gene_biotype=protein_coding;locus_tag=AD853_RS13330;old_locus_tag=ERS008462_02692 NZ_CPUY01000014.1 Protein Homology CDS 40300 40815 . + 0 ID=cds-WP_002208915.1;Parent=gene-AD853_RS13330;Dbxref=GenBank:WP_002208915.1;Name=WP_002208915.1;Ontology_term=GO:0032784,GO:0003677,GO:0070063;gbkey=CDS;gene=greB;go_function=DNA binding|0003677||IEA,RNA polymerase binding|0070063||IEA;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208915.1;locus_tag=AD853_RS13330;product=transcription elongation factor GreB;protein_id=WP_002208915.1;transl_table=11 NZ_CPUY01000014.1 RefSeq gene 40951 41670 . + . ID=gene-AD853_RS13335;Name=ompR;gbkey=Gene;gene=ompR;gene_biotype=protein_coding;locus_tag=AD853_RS13335;old_locus_tag=ERS008462_02693 NZ_CPUY01000014.1 Protein Homology CDS 40951 41670 . + 0 ID=cds-WP_002208914.1;Parent=gene-AD853_RS13335;Dbxref=GenBank:WP_002208914.1;Name=WP_002208914.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=ompR;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007374840.1;locus_tag=AD853_RS13335;product=osmolarity response regulator transcription factor OmpR;protein_id=WP_002208914.1;transl_table=11 NZ_CPUY01000014.1 RefSeq gene 41667 43019 . + . ID=gene-AD853_RS13340;Name=envZ;gbkey=Gene;gene=envZ;gene_biotype=protein_coding;locus_tag=AD853_RS13340;old_locus_tag=ERS008462_02694 NZ_CPUY01000014.1 Protein Homology CDS 41667 43019 . + 0 ID=cds-WP_002208913.1;Parent=gene-AD853_RS13340;Dbxref=GenBank:WP_002208913.1;Name=WP_002208913.1;Ontology_term=GO:0007165,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=envZ;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208913.1;locus_tag=AD853_RS13340;product=two-component system sensor histidine kinase EnvZ;protein_id=WP_002208913.1;transl_table=11 NZ_CPUY01000014.1 RefSeq gene 43134 44753 . - . ID=gene-AD853_RS13345;Name=pckA;gbkey=Gene;gene=pckA;gene_biotype=protein_coding;locus_tag=AD853_RS13345;old_locus_tag=ERS008462_02695 NZ_CPUY01000014.1 Protein Homology CDS 43134 44753 . - 0 ID=cds-WP_038824522.1;Parent=gene-AD853_RS13345;Dbxref=GenBank:WP_038824522.1;Name=WP_038824522.1;Ontology_term=GO:0006094,GO:0004612;gbkey=CDS;gene=pckA;go_function=phosphoenolpyruvate carboxykinase (ATP) activity|0004612||IEA;go_process=gluconeogenesis|0006094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002394031.1;locus_tag=AD853_RS13345;product=phosphoenolpyruvate carboxykinase (ATP);protein_id=WP_038824522.1;transl_table=11 NZ_CPUY01000014.1 RefSeq gene 44950 45831 . - . ID=gene-AD853_RS13350;Name=hslO;gbkey=Gene;gene=hslO;gene_biotype=protein_coding;locus_tag=AD853_RS13350;old_locus_tag=ERS008462_02696 NZ_CPUY01000014.1 Protein Homology CDS 44950 45831 . - 0 ID=cds-WP_002208911.1;Parent=gene-AD853_RS13350;Dbxref=GenBank:WP_002208911.1;Name=WP_002208911.1;Ontology_term=GO:0006457,GO:0051082;gbkey=CDS;gene=hslO;go_function=unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012303382.1;locus_tag=AD853_RS13350;product=Hsp33 family molecular chaperone HslO;protein_id=WP_002208911.1;transl_table=11 NZ_CPUY01000014.1 RefSeq gene 45994 46401 . - . ID=gene-AD853_RS13355;Name=hslR;gbkey=Gene;gene=hslR;gene_biotype=protein_coding;locus_tag=AD853_RS13355;old_locus_tag=ERS008462_02697 NZ_CPUY01000014.1 Protein Homology CDS 45994 46401 . - 0 ID=cds-WP_002208910.1;Parent=gene-AD853_RS13355;Dbxref=GenBank:WP_002208910.1;Name=WP_002208910.1;gbkey=CDS;gene=hslR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012230110.1;locus_tag=AD853_RS13355;product=ribosome-associated heat shock protein Hsp15;protein_id=WP_002208910.1;transl_table=11 NZ_CPUY01000014.1 RefSeq gene 46430 47110 . - . ID=gene-AD853_RS13360;Name=yrfG;gbkey=Gene;gene=yrfG;gene_biotype=protein_coding;locus_tag=AD853_RS13360;old_locus_tag=ERS008462_02698 NZ_CPUY01000014.1 Protein Homology CDS 46430 47110 . - 0 ID=cds-WP_002208909.1;Parent=gene-AD853_RS13360;Dbxref=GenBank:WP_002208909.1;Name=WP_002208909.1;gbkey=CDS;gene=yrfG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014462187.1;locus_tag=AD853_RS13360;product=GMP/IMP nucleotidase;protein_id=WP_002208909.1;transl_table=11 NZ_CPUY01000014.1 RefSeq gene 47270 49417 . - . ID=gene-AD853_RS13365;Name=AD853_RS13365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS13365;old_locus_tag=ERS008462_02699 NZ_CPUY01000014.1 Protein Homology CDS 47270 49417 . - 0 ID=cds-WP_011193239.1;Parent=gene-AD853_RS13365;Dbxref=GenBank:WP_011193239.1;Name=WP_011193239.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016266575.1;locus_tag=AD853_RS13365;product=intracellular growth attenuator family protein;protein_id=WP_011193239.1;transl_table=11 NZ_CPUY01000014.1 RefSeq gene 50004 50549 . + . ID=gene-AD853_RS13375;Name=nudE;gbkey=Gene;gene=nudE;gene_biotype=protein_coding;locus_tag=AD853_RS13375;old_locus_tag=ERS008462_02701 NZ_CPUY01000014.1 Protein Homology CDS 50004 50549 . + 0 ID=cds-WP_002208907.1;Parent=gene-AD853_RS13375;Dbxref=GenBank:WP_002208907.1;Name=WP_002208907.1;Ontology_term=GO:0016787;gbkey=CDS;gene=nudE;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208907.1;locus_tag=AD853_RS13375;product=ADP compounds hydrolase NudE;protein_id=WP_002208907.1;transl_table=11 NZ_CPUY01000014.1 RefSeq gene 50686 53241 . - . ID=gene-AD853_RS13380;Name=mrcA;gbkey=Gene;gene=mrcA;gene_biotype=protein_coding;locus_tag=AD853_RS13380;old_locus_tag=ERS008462_02702 NZ_CPUY01000014.1 Protein Homology CDS 50686 53241 . - 0 ID=cds-WP_002208906.1;Parent=gene-AD853_RS13380;Dbxref=GenBank:WP_002208906.1;Name=WP_002208906.1;Ontology_term=GO:0008658;gbkey=CDS;gene=mrcA;go_function=penicillin binding|0008658||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013650557.1;locus_tag=AD853_RS13380;product=peptidoglycan glycosyltransferase/peptidoglycan DD-transpeptidase MrcA;protein_id=WP_002208906.1;transl_table=11 NZ_CPUY01000014.1 RefSeq gene 53361 54257 . + . ID=gene-AD853_RS13385;Name=pilM;gbkey=Gene;gene=pilM;gene_biotype=protein_coding;locus_tag=AD853_RS13385;old_locus_tag=ERS008462_02703 NZ_CPUY01000014.1 Protein Homology CDS 53361 54257 . + 0 ID=cds-WP_012105886.1;Parent=gene-AD853_RS13385;Dbxref=GenBank:WP_012105886.1;Name=WP_012105886.1;Ontology_term=GO:0043683,GO:0005524,GO:0046872;gbkey=CDS;gene=pilM;go_function=ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=type IV pilus assembly|0043683||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105886.1;locus_tag=AD853_RS13385;product=type IV pilus biogenesis protein PilM;protein_id=WP_012105886.1;transl_table=11 NZ_CPUY01000014.1 RefSeq pseudogene 54257 54862 . + . ID=gene-AD853_RS13390;Name=AD853_RS13390;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD853_RS13390;pseudo=true NZ_CPUY01000014.1 Protein Homology CDS 54257 54862 . + 0 ID=cds-AD853_RS13390;Parent=gene-AD853_RS13390;Note=internal stop;Ontology_term=GO:0043107,GO:0043683;gbkey=CDS;go_process=type IV pilus-dependent motility|0043107||IEA,type IV pilus assembly|0043683||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105885.1;locus_tag=AD853_RS13390;product=PilN domain-containing protein;pseudo=true;transl_table=11 NZ_CPUY01000014.1 RefSeq gene 54855 55436 . + . ID=gene-AD853_RS13395;Name=AD853_RS13395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS13395;old_locus_tag=ERS008462_02706 NZ_CPUY01000014.1 Protein Homology CDS 54855 55436 . + 0 ID=cds-WP_012105884.1;Parent=gene-AD853_RS13395;Dbxref=GenBank:WP_012105884.1;Name=WP_012105884.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105884.1;locus_tag=AD853_RS13395;product=hypothetical protein;protein_id=WP_012105884.1;transl_table=11 NZ_CPUY01000014.1 RefSeq gene 55456 55815 . + . ID=gene-AD853_RS13400;Name=AD853_RS13400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS13400;old_locus_tag=ERS008462_02707 NZ_CPUY01000014.1 Protein Homology CDS 55456 55815 . + 0 ID=cds-WP_002223837.1;Parent=gene-AD853_RS13400;Dbxref=GenBank:WP_002223837.1;Name=WP_002223837.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105883.1;locus_tag=AD853_RS13400;product=DNA utilization family protein;protein_id=WP_002223837.1;transl_table=11 NZ_CPUY01000014.1 RefSeq gene 55818 56207 . - . ID=gene-AD853_RS22230;Name=AD853_RS22230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS22230 NZ_CPUY01000014.1 Protein Homology CDS 55818 56207 . - 0 ID=cds-WP_071990080.1;Parent=gene-AD853_RS22230;Dbxref=GenBank:WP_071990080.1;Name=WP_071990080.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208901.1;locus_tag=AD853_RS22230;product=hypothetical protein;protein_id=WP_071990080.1;transl_table=11 NZ_CPUY01000014.1 RefSeq gene 56140 57366 . + . ID=gene-AD853_RS13405;Name=hofQ;gbkey=Gene;gene=hofQ;gene_biotype=protein_coding;locus_tag=AD853_RS13405;old_locus_tag=ERS008462_02708 NZ_CPUY01000014.1 Protein Homology CDS 56140 57366 . + 0 ID=cds-WP_071525503.1;Parent=gene-AD853_RS13405;Dbxref=GenBank:WP_071525503.1;Name=WP_071525503.1;gbkey=CDS;gene=hofQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105882.1;locus_tag=AD853_RS13405;product=DNA uptake porin HofQ;protein_id=WP_071525503.1;transl_table=11 NZ_CPUY01000014.1 RefSeq gene 57715 58236 . + . ID=gene-AD853_RS13410;Name=aroK;gbkey=Gene;gene=aroK;gene_biotype=protein_coding;locus_tag=AD853_RS13410;old_locus_tag=ERS008462_02709 NZ_CPUY01000014.1 Protein Homology CDS 57715 58236 . + 0 ID=cds-WP_002208899.1;Parent=gene-AD853_RS13410;Dbxref=GenBank:WP_002208899.1;Name=WP_002208899.1;gbkey=CDS;gene=aroK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004709337.1;locus_tag=AD853_RS13410;product=shikimate kinase AroK;protein_id=WP_002208899.1;transl_table=11 NZ_CPUY01000014.1 RefSeq gene 58293 59381 . + . ID=gene-AD853_RS13415;Name=aroB;gbkey=Gene;gene=aroB;gene_biotype=protein_coding;locus_tag=AD853_RS13415;old_locus_tag=ERS008462_02710 NZ_CPUY01000014.1 Protein Homology CDS 58293 59381 . + 0 ID=cds-WP_002208898.1;Parent=gene-AD853_RS13415;Dbxref=GenBank:WP_002208898.1;Name=WP_002208898.1;Ontology_term=GO:0009073,GO:0009423,GO:0003856,GO:0005737;gbkey=CDS;gene=aroB;go_component=cytoplasm|0005737||IEA;go_function=3-dehydroquinate synthase activity|0003856||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA,chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002226114.1;locus_tag=AD853_RS13415;product=3-dehydroquinate synthase;protein_id=WP_002208898.1;transl_table=11 NZ_CPUY01000014.1 RefSeq gene 59635 60624 . + . ID=gene-AD853_RS13420;Name=AD853_RS13420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS13420;old_locus_tag=ERS008462_02711 NZ_CPUY01000014.1 Protein Homology CDS 59635 60624 . + 0 ID=cds-WP_002208897.1;Parent=gene-AD853_RS13420;Dbxref=GenBank:WP_002208897.1;Name=WP_002208897.1;Ontology_term=GO:0042834,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011906131.1;locus_tag=AD853_RS13420;product=SPOR domain-containing protein;protein_id=WP_002208897.1;transl_table=11 NZ_CPUY01000014.1 RefSeq gene 60708 61523 . + . ID=gene-AD853_RS13425;Name=dam;gbkey=Gene;gene=dam;gene_biotype=protein_coding;locus_tag=AD853_RS13425;old_locus_tag=ERS008462_02712 NZ_CPUY01000014.1 Protein Homology CDS 60708 61523 . + 0 ID=cds-WP_002208895.1;Parent=gene-AD853_RS13425;Dbxref=GenBank:WP_002208895.1;Name=WP_002208895.1;Ontology_term=GO:0003676,GO:0009007;gbkey=CDS;gene=dam;go_function=nucleic acid binding|0003676||IEA,site-specific DNA-methyltransferase (adenine-specific) activity|0009007||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208895.1;locus_tag=AD853_RS13425;product=adenine-specific DNA-methyltransferase;protein_id=WP_002208895.1;transl_table=11 NZ_CPUY01000014.1 RefSeq gene 61826 62503 . + . ID=gene-AD853_RS13430;Name=rpe;gbkey=Gene;gene=rpe;gene_biotype=protein_coding;locus_tag=AD853_RS13430;old_locus_tag=ERS008462_02713 NZ_CPUY01000014.1 Protein Homology CDS 61826 62503 . + 0 ID=cds-WP_002215694.1;Parent=gene-AD853_RS13430;Dbxref=GenBank:WP_002215694.1;Name=WP_002215694.1;Ontology_term=GO:0006098,GO:0004750;gbkey=CDS;gene=rpe;go_function=D-ribulose-phosphate 3-epimerase activity|0004750||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002215694.1;locus_tag=AD853_RS13430;product=ribulose-phosphate 3-epimerase;protein_id=WP_002215694.1;transl_table=11 NZ_CPUY01000014.1 RefSeq gene 62496 63194 . + . ID=gene-AD853_RS13435;Name=AD853_RS13435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS13435;old_locus_tag=ERS008462_02714 NZ_CPUY01000014.1 Protein Homology CDS 62496 63194 . + 0 ID=cds-WP_002208892.1;Parent=gene-AD853_RS13435;Dbxref=GenBank:WP_002208892.1;Name=WP_002208892.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011193233.1;locus_tag=AD853_RS13435;product=phosphoglycolate phosphatase;protein_id=WP_002208892.1;transl_table=11 NZ_CPUY01000014.1 RefSeq gene 63196 64236 . + . ID=gene-AD853_RS13440;Name=trpS;gbkey=Gene;gene=trpS;gene_biotype=protein_coding;locus_tag=AD853_RS13440;old_locus_tag=ERS008462_02715 NZ_CPUY01000014.1 Protein Homology CDS 63196 64236 . + 0 ID=cds-WP_002208891.1;Parent=gene-AD853_RS13440;Dbxref=GenBank:WP_002208891.1;Name=WP_002208891.1;Ontology_term=GO:0006436,GO:0000166,GO:0004830,GO:0005524;gbkey=CDS;gene=trpS;go_function=nucleotide binding|0000166||IEA,tryptophan-tRNA ligase activity|0004830||IEA,ATP binding|0005524||IEA;go_process=tryptophanyl-tRNA aminoacylation|0006436||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105881.1;locus_tag=AD853_RS13440;product=tryptophan--tRNA ligase;protein_id=WP_002208891.1;transl_table=11 NZ_CPUY01000014.1 RefSeq gene 64354 65775 . - . ID=gene-AD853_RS13445;Name=cysG;gbkey=Gene;gene=cysG;gene_biotype=protein_coding;locus_tag=AD853_RS13445;old_locus_tag=ERS008462_02716 NZ_CPUY01000014.1 Protein Homology CDS 64354 65775 . - 0 ID=cds-WP_012414077.1;Parent=gene-AD853_RS13445;Dbxref=GenBank:WP_012414077.1;Name=WP_012414077.1;Ontology_term=GO:0019354,GO:0004851,GO:0043115,GO:0051266,GO:0051287;gbkey=CDS;gene=cysG;go_function=uroporphyrin-III C-methyltransferase activity|0004851||IEA,precorrin-2 dehydrogenase activity|0043115||IEA,sirohydrochlorin ferrochelatase activity|0051266||IEA,NAD binding|0051287||IEA;go_process=siroheme biosynthetic process|0019354||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208890.1;locus_tag=AD853_RS13445;product=siroheme synthase CysG;protein_id=WP_012414077.1;transl_table=11 NZ_CPUY01000014.1 RefSeq gene 65881 66687 . - . ID=gene-AD853_RS13450;Name=nirC;gbkey=Gene;gene=nirC;gene_biotype=protein_coding;locus_tag=AD853_RS13450;old_locus_tag=ERS008462_02717 NZ_CPUY01000014.1 Protein Homology CDS 65881 66687 . - 0 ID=cds-WP_038823964.1;Parent=gene-AD853_RS13450;Dbxref=GenBank:WP_038823964.1;Name=WP_038823964.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=nirC;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208888.1;locus_tag=AD853_RS13450;product=nitrite transporter NirC;protein_id=WP_038823964.1;transl_table=11 NZ_CPUY01000014.1 RefSeq gene 66870 67196 . - . ID=gene-AD853_RS13455;Name=nirD;gbkey=Gene;gene=nirD;gene_biotype=protein_coding;locus_tag=AD853_RS13455;old_locus_tag=ERS008462_02718 NZ_CPUY01000014.1 Protein Homology CDS 66870 67196 . - 0 ID=cds-WP_002208887.1;Parent=gene-AD853_RS13455;Dbxref=GenBank:WP_002208887.1;Name=WP_002208887.1;gbkey=CDS;gene=nirD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208887.1;locus_tag=AD853_RS13455;product=nitrite reductase small subunit NirD;protein_id=WP_002208887.1;transl_table=11 NZ_CPUY01000014.1 RefSeq gene 67193 69739 . - . ID=gene-AD853_RS13460;Name=nirB;gbkey=Gene;gene=nirB;gene_biotype=protein_coding;locus_tag=AD853_RS13460;old_locus_tag=ERS008462_02719 NZ_CPUY01000014.1 Protein Homology CDS 67193 69739 . - 0 ID=cds-WP_038823966.1;Parent=gene-AD853_RS13460;Dbxref=GenBank:WP_038823966.1;Name=WP_038823966.1;Ontology_term=GO:0042128,GO:0008942,GO:0050660,GO:0050661;gbkey=CDS;gene=nirB;go_function=nitrite reductase [NAD(P)H] activity|0008942||IEA,flavin adenine dinucleotide binding|0050660||IEA,NADP binding|0050661||IEA;go_process=nitrate assimilation|0042128||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208886.1;locus_tag=AD853_RS13460;product=nitrite reductase large subunit NirB;protein_id=WP_038823966.1;transl_table=11 NZ_CPUY01000014.1 RefSeq gene 70061 71359 . + . ID=gene-AD853_RS13465;Name=AD853_RS13465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS13465;old_locus_tag=ERS008462_02720 NZ_CPUY01000014.1 Protein Homology CDS 70061 71359 . + 0 ID=cds-WP_002228747.1;Parent=gene-AD853_RS13465;Dbxref=GenBank:WP_002228747.1;Name=WP_002228747.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012414075.1;locus_tag=AD853_RS13465;product=cytosine deaminase;protein_id=WP_002228747.1;transl_table=11 NZ_CPUY01000014.1 RefSeq gene 71444 72628 . - . ID=gene-AD853_RS13470;Name=tsgA;gbkey=Gene;gene=tsgA;gene_biotype=protein_coding;locus_tag=AD853_RS13470;old_locus_tag=ERS008462_02721 NZ_CPUY01000014.1 Protein Homology CDS 71444 72628 . - 0 ID=cds-WP_011193229.1;Parent=gene-AD853_RS13470;Dbxref=GenBank:WP_011193229.1;Name=WP_011193229.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=tsgA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019084080.1;locus_tag=AD853_RS13470;product=MFS transporter TsgA;protein_id=WP_011193229.1;transl_table=11 NZ_CPUY01000014.1 RefSeq pseudogene 73109 75144 . + . ID=gene-AD853_RS13475;Name=AD853_RS13475;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD853_RS13475;pseudo=true NZ_CPUY01000014.1 Protein Homology CDS 73109 75144 . + 0 ID=cds-AD853_RS13475;Parent=gene-AD853_RS13475;Note=frameshifted%3B internal stop;Ontology_term=GO:0006825,GO:0005375,GO:0005507,GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;go_function=copper ion transmembrane transporter activity|0005375||IEA,copper ion binding|0005507||IEA;go_process=copper ion transport|0006825||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208882.1;locus_tag=AD853_RS13475;product=TonB-dependent copper receptor;pseudo=true;transl_table=11 NZ_CPUY01000014.1 RefSeq gene 75235 76221 . - . ID=gene-AD853_RS13480;Name=AD853_RS13480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS13480;old_locus_tag=ERS008462_02725 NZ_CPUY01000014.1 Protein Homology CDS 75235 76221 . - 0 ID=cds-WP_002208881.1;Parent=gene-AD853_RS13480;Dbxref=GenBank:WP_002208881.1;Name=WP_002208881.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208881.1;locus_tag=AD853_RS13480;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_002208881.1;transl_table=11 NZ_CPUY01000014.1 RefSeq gene 76450 77763 . - . ID=gene-AD853_RS13485;Name=AD853_RS13485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS13485;old_locus_tag=ERS008462_02726 NZ_CPUY01000014.1 Protein Homology CDS 76450 77763 . - 0 ID=cds-WP_011193227.1;Parent=gene-AD853_RS13485;Dbxref=GenBank:WP_011193227.1;Name=WP_011193227.1;Ontology_term=GO:0005975,GO:0008706,GO:0046872;gbkey=CDS;go_function=6-phospho-beta-glucosidase activity|0008706||IEA,metal ion binding|0046872||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011193227.1;locus_tag=AD853_RS13485;product=6-phospho-beta-glucosidase;protein_id=WP_011193227.1;transl_table=11 NZ_CPUY01000014.1 RefSeq gene 78278 78847 . + . ID=gene-AD853_RS13490;Name=ppiA;gbkey=Gene;gene=ppiA;gene_biotype=protein_coding;gene_synonym=rotA;locus_tag=AD853_RS13490;old_locus_tag=ERS008462_02727 NZ_CPUY01000014.1 Protein Homology CDS 78278 78847 . + 0 ID=cds-WP_002208878.1;Parent=gene-AD853_RS13490;Dbxref=GenBank:WP_002208878.1;Name=WP_002208878.1;gbkey=CDS;gene=ppiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312241.1;locus_tag=AD853_RS13490;product=peptidylprolyl isomerase A;protein_id=WP_002208878.1;transl_table=11 NZ_CPUY01000014.1 RefSeq gene 79173 80717 . + . ID=gene-AD853_RS13495;Name=AD853_RS13495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS13495;old_locus_tag=ERS008462_02728 NZ_CPUY01000014.1 Protein Homology CDS 79173 80717 . + 0 ID=cds-WP_038823967.1;Parent=gene-AD853_RS13495;Dbxref=GenBank:WP_038823967.1;Name=WP_038823967.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012303426.1;locus_tag=AD853_RS13495;product=helicase HerA-like domain-containing protein;protein_id=WP_038823967.1;transl_table=11 NZ_CPUY01000014.1 RefSeq gene 80960 81535 . + . ID=gene-AD853_RS13500;Name=AD853_RS13500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS13500;old_locus_tag=ERS008462_02729 NZ_CPUY01000014.1 Protein Homology CDS 80960 81535 . + 0 ID=cds-WP_011193225.1;Parent=gene-AD853_RS13500;Dbxref=GenBank:WP_011193225.1;Name=WP_011193225.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019081524.1;locus_tag=AD853_RS13500;product=aminodeoxychorismate synthase component II;protein_id=WP_011193225.1;transl_table=11 NZ_CPUY01000014.1 RefSeq gene 81668 82885 . + . ID=gene-AD853_RS13505;Name=argD;gbkey=Gene;gene=argD;gene_biotype=protein_coding;gene_synonym=dapC;locus_tag=AD853_RS13505;old_locus_tag=ERS008462_02730 NZ_CPUY01000014.1 Protein Homology CDS 81668 82885 . + 0 ID=cds-WP_038823968.1;Parent=gene-AD853_RS13505;Dbxref=GenBank:WP_038823968.1;Name=WP_038823968.1;gbkey=CDS;gene=argD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016595175.1;locus_tag=AD853_RS13505;product=bifunctional acetylornithine/succinyldiaminopimelate transaminase;protein_id=WP_038823968.1;transl_table=11 NZ_CPUY01000014.1 RefSeq gene 82930 85050 . - . ID=gene-AD853_RS13510;Name=AD853_RS13510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS13510;old_locus_tag=ERS008462_02731 NZ_CPUY01000014.1 Protein Homology CDS 82930 85050 . - 0 ID=cds-WP_038825524.1;Parent=gene-AD853_RS13510;Dbxref=GenBank:WP_038825524.1;Name=WP_038825524.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012303428.1;locus_tag=AD853_RS13510;product=YccS/YhfK family putative transporter;protein_id=WP_038825524.1;transl_table=11 NZ_CPUY01000014.1 RefSeq gene 85136 85768 . - . ID=gene-AD853_RS13515;Name=crp;gbkey=Gene;gene=crp;gene_biotype=protein_coding;locus_tag=AD853_RS13515;old_locus_tag=ERS008462_02732 NZ_CPUY01000014.1 Protein Homology CDS 85136 85768 . - 0 ID=cds-WP_002212297.1;Parent=gene-AD853_RS13515;Dbxref=GenBank:WP_002212297.1;Name=WP_002212297.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=crp;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016506431.1;locus_tag=AD853_RS13515;product=cAMP-activated global transcriptional regulator CRP;protein_id=WP_002212297.1;transl_table=11 NZ_CPUY01000014.1 RefSeq gene 86104 86511 . + . ID=gene-AD853_RS13520;Name=AD853_RS13520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS13520;old_locus_tag=ERS008462_02733 NZ_CPUY01000014.1 Protein Homology CDS 86104 86511 . + 0 ID=cds-WP_002212298.1;Parent=gene-AD853_RS13520;Dbxref=GenBank:WP_002212298.1;Name=WP_002212298.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011906133.1;locus_tag=AD853_RS13520;product=OsmC family protein;protein_id=WP_002212298.1;transl_table=11 NZ_CPUY01000014.1 RefSeq gene 86583 87014 . + . ID=gene-AD853_RS13525;Name=AD853_RS13525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS13525;old_locus_tag=ERS008462_02734 NZ_CPUY01000014.1 Protein Homology CDS 86583 87014 . + 0 ID=cds-WP_002228139.1;Parent=gene-AD853_RS13525;Dbxref=GenBank:WP_002228139.1;Name=WP_002228139.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002228139.1;locus_tag=AD853_RS13525;product=DUF1240 domain-containing protein;protein_id=WP_002228139.1;transl_table=11 NZ_CPUY01000014.1 RefSeq gene 87195 88064 . - . ID=gene-AD853_RS13530;Name=AD853_RS13530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS13530;old_locus_tag=ERS008462_02735 NZ_CPUY01000014.1 Protein Homology CDS 87195 88064 . - 0 ID=cds-WP_002212300.1;Parent=gene-AD853_RS13530;Dbxref=GenBank:WP_002212300.1;Name=WP_002212300.1;Ontology_term=GO:0005975,GO:0005524,GO:0008974;gbkey=CDS;go_function=ATP binding|0005524||IEA,phosphoribulokinase activity|0008974||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212300.1;locus_tag=AD853_RS13530;product=phosphoribulokinase;protein_id=WP_002212300.1;transl_table=11 NZ_CPUY01000014.1 RefSeq gene 88213 88449 . - . ID=gene-AD853_RS13535;Name=AD853_RS13535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS13535;old_locus_tag=ERS008462_02736 NZ_CPUY01000014.1 Protein Homology CDS 88213 88449 . - 0 ID=cds-WP_038823971.1;Parent=gene-AD853_RS13535;Dbxref=GenBank:WP_038823971.1;Name=WP_038823971.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212301.1;locus_tag=AD853_RS13535;product=YheU family protein;protein_id=WP_038823971.1;transl_table=11 NZ_CPUY01000014.1 RefSeq gene 88446 89426 . - . ID=gene-AD853_RS13540;Name=AD853_RS13540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS13540;old_locus_tag=ERS008462_02737 NZ_CPUY01000014.1 Protein Homology CDS 88446 89426 . - 0 ID=cds-WP_002212302.1;Parent=gene-AD853_RS13540;Dbxref=GenBank:WP_002212302.1;Name=WP_002212302.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014462221.1;locus_tag=AD853_RS13540;product=hydrolase;protein_id=WP_002212302.1;transl_table=11 NZ_CPUY01000014.1 RefSeq gene 89528 90130 . + . ID=gene-AD853_RS13545;Name=AD853_RS13545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS13545;old_locus_tag=ERS008462_02738 NZ_CPUY01000014.1 Protein Homology CDS 89528 90130 . + 0 ID=cds-WP_011193221.1;Parent=gene-AD853_RS13545;Dbxref=GenBank:WP_011193221.1;Name=WP_011193221.1;Ontology_term=GO:0006865,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004391456.1;locus_tag=AD853_RS13545;product=LysE family translocator;protein_id=WP_011193221.1;transl_table=11 NZ_CPUY01000014.1 RefSeq gene 90397 91290 . + . ID=gene-AD853_RS13550;Name=tauA;gbkey=Gene;gene=tauA;gene_biotype=protein_coding;locus_tag=AD853_RS13550;old_locus_tag=ERS008462_02739 NZ_CPUY01000014.1 Protein Homology CDS 90397 91290 . + 0 ID=cds-WP_317889202.1;Parent=gene-AD853_RS13550;Dbxref=GenBank:WP_317889202.1;Name=WP_317889202.1;Ontology_term=GO:0055085,GO:0015411,GO:0042597,GO:0043190;gbkey=CDS;gene=tauA;go_component=periplasmic space|0042597||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ABC-type taurine transporter transporter activity|0015411||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004391454.1;locus_tag=AD853_RS13550;product=taurine ABC transporter substrate-binding protein;protein_id=WP_317889202.1;transl_table=11 NZ_CPUY01000014.1 RefSeq gene 91299 92066 . + . ID=gene-AD853_RS13555;Name=tauB;gbkey=Gene;gene=tauB;gene_biotype=protein_coding;locus_tag=AD853_RS13555;old_locus_tag=ERS008462_02740 NZ_CPUY01000014.1 Protein Homology CDS 91299 92066 . + 0 ID=cds-WP_002212307.1;Parent=gene-AD853_RS13555;Dbxref=GenBank:WP_002212307.1;Name=WP_002212307.1;Ontology_term=GO:0005524,GO:0015411,GO:0016020;gbkey=CDS;gene=tauB;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type taurine transporter transporter activity|0015411||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005186200.1;locus_tag=AD853_RS13555;product=taurine ABC transporter ATP-binding subunit;protein_id=WP_002212307.1;transl_table=11 NZ_CPUY01000014.1 RefSeq gene 92063 92917 . + . ID=gene-AD853_RS13560;Name=tauC;gbkey=Gene;gene=tauC;gene_biotype=protein_coding;locus_tag=AD853_RS13560;old_locus_tag=ERS008462_02741 NZ_CPUY01000014.1 Protein Homology CDS 92063 92917 . + 0 ID=cds-WP_002212309.1;Parent=gene-AD853_RS13560;Dbxref=GenBank:WP_002212309.1;Name=WP_002212309.1;Ontology_term=GO:0055085,GO:0015411,GO:0016020;gbkey=CDS;gene=tauC;go_component=membrane|0016020||IEA;go_function=ABC-type taurine transporter transporter activity|0015411||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212309.1;locus_tag=AD853_RS13560;product=taurine ABC transporter permease TauC;protein_id=WP_002212309.1;transl_table=11 NZ_CPUY01000014.1 RefSeq gene 92914 93762 . + . ID=gene-AD853_RS13565;Name=tauD;gbkey=Gene;gene=tauD;gene_biotype=protein_coding;locus_tag=AD853_RS13565;old_locus_tag=ERS008462_02742 NZ_CPUY01000014.1 Protein Homology CDS 92914 93762 . + 0 ID=cds-WP_002212310.1;Parent=gene-AD853_RS13565;Dbxref=GenBank:WP_002212310.1;Name=WP_002212310.1;Ontology_term=GO:0016491;gbkey=CDS;gene=tauD;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019081513.1;locus_tag=AD853_RS13565;product=taurine dioxygenase;protein_id=WP_002212310.1;transl_table=11 NZ_CPUY01000014.1 RefSeq gene 93775 94755 . - . ID=gene-AD853_RS13570;Name=AD853_RS13570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS13570;old_locus_tag=ERS008462_02743 NZ_CPUY01000014.1 Protein Homology CDS 93775 94755 . - 0 ID=cds-WP_038823975.1;Parent=gene-AD853_RS13570;Dbxref=GenBank:WP_038823975.1;Name=WP_038823975.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105872.1;locus_tag=AD853_RS13570;product=glycosyltransferase family 9 protein;protein_id=WP_038823975.1;transl_table=11 NZ_CPUY01000014.1 RefSeq gene 94848 95837 . - . ID=gene-AD853_RS13575;Name=AD853_RS13575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS13575;old_locus_tag=ERS008462_02744 NZ_CPUY01000014.1 Protein Homology CDS 94848 95837 . - 0 ID=cds-WP_038823976.1;Parent=gene-AD853_RS13575;Dbxref=GenBank:WP_038823976.1;Name=WP_038823976.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105871.1;locus_tag=AD853_RS13575;product=glycosyltransferase;protein_id=WP_038823976.1;transl_table=11 NZ_CPUY01000014.1 RefSeq gene 95972 97894 . - . ID=gene-AD853_RS13580;Name=AD853_RS13580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS13580;old_locus_tag=ERS008462_02745 NZ_CPUY01000014.1 Protein Homology CDS 95972 97894 . - 0 ID=cds-WP_002230378.1;Parent=gene-AD853_RS13580;Dbxref=GenBank:WP_002230378.1;Name=WP_002230378.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012303435.1;locus_tag=AD853_RS13580;product=ABC transporter ATP-binding protein;protein_id=WP_002230378.1;transl_table=11 NZ_CPUY01000014.1 RefSeq gene 98145 98693 . + . ID=gene-AD853_RS13585;Name=kefG;gbkey=Gene;gene=kefG;gene_biotype=protein_coding;locus_tag=AD853_RS13585;old_locus_tag=ERS008462_02746 NZ_CPUY01000014.1 Protein Homology CDS 98145 98693 . + 0 ID=cds-WP_002215966.1;Parent=gene-AD853_RS13585;Dbxref=GenBank:WP_002215966.1;Name=WP_002215966.1;Ontology_term=GO:0006813;gbkey=CDS;gene=kefG;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002215966.1;locus_tag=AD853_RS13585;product=glutathione-regulated potassium-efflux system ancillary protein KefG;protein_id=WP_002215966.1;transl_table=11 NZ_CPUY01000014.1 RefSeq gene 98697 100505 . + . ID=gene-AD853_RS13590;Name=kefB;gbkey=Gene;gene=kefB;gene_biotype=protein_coding;locus_tag=AD853_RS13590;old_locus_tag=ERS008462_02747 NZ_CPUY01000014.1 Protein Homology CDS 98697 100505 . + 0 ID=cds-WP_002212314.1;Parent=gene-AD853_RS13590;Dbxref=GenBank:WP_002212314.1;Name=WP_002212314.1;Ontology_term=GO:0006813,GO:0015503;gbkey=CDS;gene=kefB;go_function=glutathione-regulated potassium exporter activity|0015503||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019456128.1;locus_tag=AD853_RS13590;product=glutathione-regulated potassium-efflux system protein KefB;protein_id=WP_002212314.1;transl_table=11 NZ_CPUY01000014.1 RefSeq gene 100521 100742 . + . ID=gene-AD853_RS13595;Name=AD853_RS13595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS13595;old_locus_tag=ERS008462_02748 NZ_CPUY01000014.1 Protein Homology CDS 100521 100742 . + 0 ID=cds-WP_002212315.1;Parent=gene-AD853_RS13595;Dbxref=GenBank:WP_002212315.1;Name=WP_002212315.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212315.1;locus_tag=AD853_RS13595;product=YheV family putative zinc ribbon protein;protein_id=WP_002212315.1;transl_table=11 NZ_CPUY01000014.1 RefSeq gene 100837 101424 . + . ID=gene-AD853_RS13600;Name=slyD;gbkey=Gene;gene=slyD;gene_biotype=protein_coding;locus_tag=AD853_RS13600;old_locus_tag=ERS008462_02749 NZ_CPUY01000014.1 Protein Homology CDS 100837 101424 . + 0 ID=cds-WP_002212316.1;Parent=gene-AD853_RS13600;Dbxref=GenBank:WP_002212316.1;Name=WP_002212316.1;Ontology_term=GO:0003755;gbkey=CDS;gene=slyD;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212316.1;locus_tag=AD853_RS13600;product=peptidylprolyl isomerase;protein_id=WP_002212316.1;transl_table=11 NZ_CPUY01000014.1 RefSeq gene 101625 101843 . - . ID=gene-AD853_RS13605;Name=AD853_RS13605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS13605;old_locus_tag=ERS008462_02750 NZ_CPUY01000014.1 Protein Homology CDS 101625 101843 . - 0 ID=cds-WP_002212317.1;Parent=gene-AD853_RS13605;Dbxref=GenBank:WP_002212317.1;Name=WP_002212317.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004875114.1;locus_tag=AD853_RS13605;product=protein SlyX;protein_id=WP_002212317.1;transl_table=11 NZ_CPUY01000014.1 RefSeq gene 102158 102958 . + . ID=gene-AD853_RS13610;Name=fkpA;gbkey=Gene;gene=fkpA;gene_biotype=protein_coding;locus_tag=AD853_RS13610;old_locus_tag=ERS008462_02751 NZ_CPUY01000014.1 Protein Homology CDS 102158 102958 . + 0 ID=cds-WP_002212318.1;Parent=gene-AD853_RS13610;Dbxref=GenBank:WP_002212318.1;Name=WP_002212318.1;Ontology_term=GO:0006457,GO:0003755;gbkey=CDS;gene=fkpA;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212318.1;locus_tag=AD853_RS13610;product=FKBP-type peptidyl-prolyl cis-trans isomerase;protein_id=WP_002212318.1;transl_table=11 NZ_CPUY01000014.1 RefSeq gene 103212 103934 . + . ID=gene-AD853_RS13615;Name=AD853_RS13615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS13615;old_locus_tag=ERS008462_02752 NZ_CPUY01000014.1 Protein Homology CDS 103212 103934 . + 0 ID=cds-WP_002212319.1;Parent=gene-AD853_RS13615;Dbxref=GenBank:WP_002212319.1;Name=WP_002212319.1;Ontology_term=GO:0006355,GO:0007165,GO:0003677,GO:0003700,GO:0005515,GO:0140110;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,protein binding|0005515||IEA,transcription regulator activity|0140110||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012147233.1;locus_tag=AD853_RS13615;product=helix-turn-helix transcriptional regulator;protein_id=WP_002212319.1;transl_table=11 NZ_CPUY01000014.1 RefSeq gene 103934 104329 . + . ID=gene-AD853_RS13620;Name=tusD;gbkey=Gene;gene=tusD;gene_biotype=protein_coding;locus_tag=AD853_RS13620;old_locus_tag=ERS008462_02753 NZ_CPUY01000014.1 Protein Homology CDS 103934 104329 . + 0 ID=cds-WP_002212320.1;Parent=gene-AD853_RS13620;Dbxref=GenBank:WP_002212320.1;Name=WP_002212320.1;Ontology_term=GO:0008033,GO:0016783;gbkey=CDS;gene=tusD;go_function=sulfurtransferase activity|0016783||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212320.1;locus_tag=AD853_RS13620;product=sulfurtransferase complex subunit TusD;protein_id=WP_002212320.1;transl_table=11 NZ_CPUY01000014.1 RefSeq gene 104329 104694 . + . ID=gene-AD853_RS13625;Name=tusC;gbkey=Gene;gene=tusC;gene_biotype=protein_coding;locus_tag=AD853_RS13625;old_locus_tag=ERS008462_02754 NZ_CPUY01000014.1 Protein Homology CDS 104329 104694 . + 0 ID=cds-WP_002212321.1;Parent=gene-AD853_RS13625;Dbxref=GenBank:WP_002212321.1;Name=WP_002212321.1;gbkey=CDS;gene=tusC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212321.1;locus_tag=AD853_RS13625;product=sulfurtransferase complex subunit TusC;protein_id=WP_002212321.1;transl_table=11 NZ_CPUY01000014.1 RefSeq gene 104714 105001 . + . ID=gene-AD853_RS13630;Name=tusB;gbkey=Gene;gene=tusB;gene_biotype=protein_coding;locus_tag=AD853_RS13630;old_locus_tag=ERS008462_02755 NZ_CPUY01000014.1 Protein Homology CDS 104714 105001 . + 0 ID=cds-WP_002212322.1;Parent=gene-AD853_RS13630;Dbxref=GenBank:WP_002212322.1;Name=WP_002212322.1;Ontology_term=GO:0002143;gbkey=CDS;gene=tusB;go_process=tRNA wobble position uridine thiolation|0002143||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004875108.1;locus_tag=AD853_RS13630;product=sulfurtransferase complex subunit TusB;protein_id=WP_002212322.1;transl_table=11 NZ_CPUY01000014.1 RefSeq gene 105139 105513 . + . ID=gene-AD853_RS13635;Name=rpsL;gbkey=Gene;gene=rpsL;gene_biotype=protein_coding;locus_tag=AD853_RS13635;old_locus_tag=ERS008462_02756 NZ_CPUY01000014.1 Protein Homology CDS 105139 105513 . + 0 ID=cds-WP_002212323.1;Parent=gene-AD853_RS13635;Dbxref=GenBank:WP_002212323.1;Name=WP_002212323.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsL;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003852912.1;locus_tag=AD853_RS13635;product=30S ribosomal protein S12;protein_id=WP_002212323.1;transl_table=11 NZ_CPUY01000014.1 RefSeq gene 105610 106080 . + . ID=gene-AD853_RS13640;Name=rpsG;gbkey=Gene;gene=rpsG;gene_biotype=protein_coding;locus_tag=AD853_RS13640;old_locus_tag=ERS008462_02757 NZ_CPUY01000014.1 Protein Homology CDS 105610 106080 . + 0 ID=cds-WP_002212324.1;Parent=gene-AD853_RS13640;Dbxref=GenBank:WP_002212324.1;Name=WP_002212324.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsG;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001742319.1;locus_tag=AD853_RS13640;product=30S ribosomal protein S7;protein_id=WP_002212324.1;transl_table=11 NZ_CPUY01000014.1 RefSeq gene 106174 108282 . + . ID=gene-AD853_RS13645;Name=fusA;gbkey=Gene;gene=fusA;gene_biotype=protein_coding;locus_tag=AD853_RS13645;old_locus_tag=ERS008462_02758 NZ_CPUY01000014.1 Protein Homology CDS 106174 108282 . + 0 ID=cds-WP_002212325.1;Parent=gene-AD853_RS13645;Dbxref=GenBank:WP_002212325.1;Name=WP_002212325.1;Ontology_term=GO:0006414,GO:0003746,GO:0005525;gbkey=CDS;gene=fusA;go_function=translation elongation factor activity|0003746||IEA,GTP binding|0005525||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020455498.1;locus_tag=AD853_RS13645;product=elongation factor G;protein_id=WP_002212325.1;transl_table=11 NZ_CPUY01000014.1 RefSeq gene 108354 109538 . + . ID=gene-AD853_RS13650;Name=tuf;gbkey=Gene;gene=tuf;gene_biotype=protein_coding;locus_tag=AD853_RS13650;old_locus_tag=ERS008462_02759 NZ_CPUY01000014.1 Protein Homology CDS 108354 109538 . + 0 ID=cds-WP_002212326.1;Parent=gene-AD853_RS13650;Dbxref=GenBank:WP_002212326.1;Name=WP_002212326.1;Ontology_term=GO:0006414,GO:0003746,GO:0005525;gbkey=CDS;gene=tuf;go_function=translation elongation factor activity|0003746||IEA,GTP binding|0005525||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012147227.1;locus_tag=AD853_RS13650;product=elongation factor Tu;protein_id=WP_002212326.1;transl_table=11 NZ_CPUY01000014.1 RefSeq gene 109677 109871 . + . ID=gene-AD853_RS13655;Name=bfd;gbkey=Gene;gene=bfd;gene_biotype=protein_coding;locus_tag=AD853_RS13655;old_locus_tag=ERS008462_02760 NZ_CPUY01000014.1 Protein Homology CDS 109677 109871 . + 0 ID=cds-WP_002228136.1;Parent=gene-AD853_RS13655;Dbxref=GenBank:WP_002228136.1;Name=WP_002228136.1;gbkey=CDS;gene=bfd;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004702312.1;locus_tag=AD853_RS13655;product=bacterioferritin-associated ferredoxin;protein_id=WP_002228136.1;transl_table=11 NZ_CPUY01000014.1 RefSeq gene 109950 110423 . + . ID=gene-AD853_RS13660;Name=bfr;gbkey=Gene;gene=bfr;gene_biotype=protein_coding;locus_tag=AD853_RS13660;old_locus_tag=ERS008462_02761 NZ_CPUY01000014.1 Protein Homology CDS 109950 110423 . + 0 ID=cds-WP_012105867.1;Parent=gene-AD853_RS13660;Dbxref=GenBank:WP_012105867.1;Name=WP_012105867.1;Ontology_term=GO:0006879,GO:0004322,GO:0008199;gbkey=CDS;gene=bfr;go_function=ferroxidase activity|0004322||IEA,ferric iron binding|0008199||IEA;go_process=intracellular iron ion homeostasis|0006879||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005174628.1;locus_tag=AD853_RS13660;product=bacterioferritin;protein_id=WP_012105867.1;transl_table=11 NZ_CPUY01000014.1 RefSeq gene 110837 111148 . + . ID=gene-AD853_RS13665;Name=rpsJ;gbkey=Gene;gene=rpsJ;gene_biotype=protein_coding;locus_tag=AD853_RS13665;old_locus_tag=ERS008462_02762 NZ_CPUY01000014.1 Protein Homology CDS 110837 111148 . + 0 ID=cds-WP_001181005.1;Parent=gene-AD853_RS13665;Dbxref=GenBank:WP_001181005.1;Name=WP_001181005.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsJ;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014268624.1;locus_tag=AD853_RS13665;product=30S ribosomal protein S10;protein_id=WP_001181005.1;transl_table=11 NZ_CPUY01000014.1 RefSeq gene 111181 111810 . + . ID=gene-AD853_RS13670;Name=rplC;gbkey=Gene;gene=rplC;gene_biotype=protein_coding;locus_tag=AD853_RS13670;old_locus_tag=ERS008462_02763 NZ_CPUY01000014.1 Protein Homology CDS 111181 111810 . + 0 ID=cds-WP_002218932.1;Parent=gene-AD853_RS13670;Dbxref=GenBank:WP_002218932.1;Name=WP_002218932.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplC;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000579825.1;locus_tag=AD853_RS13670;product=50S ribosomal protein L3;protein_id=WP_002218932.1;transl_table=11 NZ_CPUY01000014.1 RefSeq gene 111827 112432 . + . ID=gene-AD853_RS13675;Name=rplD;gbkey=Gene;gene=rplD;gene_biotype=protein_coding;locus_tag=AD853_RS13675;old_locus_tag=ERS008462_02764 NZ_CPUY01000014.1 Protein Homology CDS 111827 112432 . + 0 ID=cds-WP_002218934.1;Parent=gene-AD853_RS13675;Dbxref=GenBank:WP_002218934.1;Name=WP_002218934.1;Ontology_term=GO:0006412,GO:0003735,GO:0022625;gbkey=CDS;gene=rplD;go_component=cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010304939.1;locus_tag=AD853_RS13675;product=50S ribosomal protein L4;protein_id=WP_002218934.1;transl_table=11 NZ_CPUY01000014.1 RefSeq gene 112429 112731 . + . ID=gene-AD853_RS13680;Name=rplW;gbkey=Gene;gene=rplW;gene_biotype=protein_coding;locus_tag=AD853_RS13680;old_locus_tag=ERS008462_02765 NZ_CPUY01000014.1 Protein Homology CDS 112429 112731 . + 0 ID=cds-WP_002213423.1;Parent=gene-AD853_RS13680;Dbxref=GenBank:WP_002213423.1;Name=WP_002213423.1;gbkey=CDS;gene=rplW;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007891652.1;locus_tag=AD853_RS13680;product=50S ribosomal protein L23;protein_id=WP_002213423.1;transl_table=11 NZ_CPUY01000014.1 RefSeq gene 112748 113572 . + . ID=gene-AD853_RS13685;Name=rplB;gbkey=Gene;gene=rplB;gene_biotype=protein_coding;locus_tag=AD853_RS13685;old_locus_tag=ERS008462_02766 NZ_CPUY01000014.1 Protein Homology CDS 112748 113572 . + 0 ID=cds-WP_002213425.1;Parent=gene-AD853_RS13685;Dbxref=GenBank:WP_002213425.1;Name=WP_002213425.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0016740,GO:0015934;gbkey=CDS;gene=rplB;go_component=large ribosomal subunit|0015934||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA,transferase activity|0016740||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002213425.1;locus_tag=AD853_RS13685;product=50S ribosomal protein L2;protein_id=WP_002213425.1;transl_table=11 NZ_CPUY01000014.1 RefSeq gene 113587 113865 . + . ID=gene-AD853_RS13690;Name=rpsS;gbkey=Gene;gene=rpsS;gene_biotype=protein_coding;locus_tag=AD853_RS13690;old_locus_tag=ERS008462_02767 NZ_CPUY01000014.1 Protein Homology CDS 113587 113865 . + 0 ID=cds-WP_002213430.1;Parent=gene-AD853_RS13690;Dbxref=GenBank:WP_002213430.1;Name=WP_002213430.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsS;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011148791.1;locus_tag=AD853_RS13690;product=30S ribosomal protein S19;protein_id=WP_002213430.1;transl_table=11 NZ_CPUY01000014.1 RefSeq gene 113880 114212 . + . ID=gene-AD853_RS13695;Name=rplV;gbkey=Gene;gene=rplV;gene_biotype=protein_coding;locus_tag=AD853_RS13695;old_locus_tag=ERS008462_02768 NZ_CPUY01000014.1 Protein Homology CDS 113880 114212 . + 0 ID=cds-WP_050124609.1;Parent=gene-AD853_RS13695;Dbxref=GenBank:WP_050124609.1;Name=WP_050124609.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplV;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000447526.1;locus_tag=AD853_RS13695;product=50S ribosomal protein L22;protein_id=WP_050124609.1;transl_table=11 NZ_CPUY01000014.1 RefSeq gene 114230 114928 . + . ID=gene-AD853_RS13700;Name=rpsC;gbkey=Gene;gene=rpsC;gene_biotype=protein_coding;locus_tag=AD853_RS13700;old_locus_tag=ERS008462_02769 NZ_CPUY01000014.1 Protein Homology CDS 114230 114928 . + 0 ID=cds-WP_002221644.1;Parent=gene-AD853_RS13700;Dbxref=GenBank:WP_002221644.1;Name=WP_002221644.1;Ontology_term=GO:0006412,GO:0003735;gbkey=CDS;gene=rpsC;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001742302.1;locus_tag=AD853_RS13700;product=30S ribosomal protein S3;protein_id=WP_002221644.1;transl_table=11 NZ_CPUY01000014.1 RefSeq gene 114941 115351 . + . ID=gene-AD853_RS13705;Name=rplP;gbkey=Gene;gene=rplP;gene_biotype=protein_coding;locus_tag=AD853_RS13705;old_locus_tag=ERS008462_02770 NZ_CPUY01000014.1 Protein Homology CDS 114941 115351 . + 0 ID=cds-WP_002218940.1;Parent=gene-AD853_RS13705;Dbxref=GenBank:WP_002218940.1;Name=WP_002218940.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843;gbkey=CDS;gene=rplP;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017805229.1;locus_tag=AD853_RS13705;product=50S ribosomal protein L16;protein_id=WP_002218940.1;transl_table=11 NZ_CPUY01000014.1 RefSeq gene 115351 115542 . + . ID=gene-AD853_RS13710;Name=rpmC;gbkey=Gene;gene=rpmC;gene_biotype=protein_coding;locus_tag=AD853_RS13710;old_locus_tag=ERS008462_02771 NZ_CPUY01000014.1 Protein Homology CDS 115351 115542 . + 0 ID=cds-WP_002218942.1;Parent=gene-AD853_RS13710;Dbxref=GenBank:WP_002218942.1;Name=WP_002218942.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmC;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000644743.1;locus_tag=AD853_RS13710;product=50S ribosomal protein L29;protein_id=WP_002218942.1;transl_table=11 NZ_CPUY01000014.1 RefSeq gene 115542 115796 . + . ID=gene-AD853_RS13715;Name=rpsQ;gbkey=Gene;gene=rpsQ;gene_biotype=protein_coding;locus_tag=AD853_RS13715;old_locus_tag=ERS008462_02772 NZ_CPUY01000014.1 Protein Homology CDS 115542 115796 . + 0 ID=cds-WP_002228135.1;Parent=gene-AD853_RS13715;Dbxref=GenBank:WP_002228135.1;Name=WP_002228135.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsQ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006817275.1;locus_tag=AD853_RS13715;product=30S ribosomal protein S17;protein_id=WP_002228135.1;transl_table=11 NZ_CPUY01000014.1 RefSeq gene 115977 116348 . + . ID=gene-AD853_RS13720;Name=rplN;gbkey=Gene;gene=rplN;gene_biotype=protein_coding;locus_tag=AD853_RS13720;old_locus_tag=ERS008462_02773 NZ_CPUY01000014.1 Protein Homology CDS 115977 116348 . + 0 ID=cds-WP_002213325.1;Parent=gene-AD853_RS13720;Dbxref=GenBank:WP_002213325.1;Name=WP_002213325.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplN;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012728338.1;locus_tag=AD853_RS13720;product=50S ribosomal protein L14;protein_id=WP_002213325.1;transl_table=11 NZ_CPUY01000014.1 RefSeq gene 116359 116673 . + . ID=gene-AD853_RS13725;Name=rplX;gbkey=Gene;gene=rplX;gene_biotype=protein_coding;locus_tag=AD853_RS13725;old_locus_tag=ERS008462_02774 NZ_CPUY01000014.1 Protein Homology CDS 116359 116673 . + 0 ID=cds-WP_002213327.1;Parent=gene-AD853_RS13725;Dbxref=GenBank:WP_002213327.1;Name=WP_002213327.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplX;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000729185.1;locus_tag=AD853_RS13725;product=50S ribosomal protein L24;protein_id=WP_002213327.1;transl_table=11 NZ_CPUY01000014.1 RefSeq gene 116688 117227 . + . ID=gene-AD853_RS13730;Name=rplE;gbkey=Gene;gene=rplE;gene_biotype=protein_coding;locus_tag=AD853_RS13730;old_locus_tag=ERS008462_02775 NZ_CPUY01000014.1 Protein Homology CDS 116688 117227 . + 0 ID=cds-WP_002213329.1;Parent=gene-AD853_RS13730;Dbxref=GenBank:WP_002213329.1;Name=WP_002213329.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplE;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001096198.1;locus_tag=AD853_RS13730;product=50S ribosomal protein L5;protein_id=WP_002213329.1;transl_table=11 NZ_CPUY01000014.1 RefSeq gene 117241 117546 . + . ID=gene-AD853_RS13735;Name=rpsN;gbkey=Gene;gene=rpsN;gene_biotype=protein_coding;locus_tag=AD853_RS13735;old_locus_tag=ERS008462_02776 NZ_CPUY01000014.1 Protein Homology CDS 117241 117546 . + 0 ID=cds-WP_002213330.1;Parent=gene-AD853_RS13735;Dbxref=GenBank:WP_002213330.1;Name=WP_002213330.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsN;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005599304.1;locus_tag=AD853_RS13735;product=30S ribosomal protein S14;protein_id=WP_002213330.1;transl_table=11 NZ_CPUY01000014.1 RefSeq gene 117580 117972 . + . ID=gene-AD853_RS13740;Name=rpsH;gbkey=Gene;gene=rpsH;gene_biotype=protein_coding;locus_tag=AD853_RS13740;old_locus_tag=ERS008462_02777 NZ_CPUY01000014.1 Protein Homology CDS 117580 117972 . + 0 ID=cds-WP_002213332.1;Parent=gene-AD853_RS13740;Dbxref=GenBank:WP_002213332.1;Name=WP_002213332.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsH;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011148781.1;locus_tag=AD853_RS13740;product=30S ribosomal protein S8;protein_id=WP_002213332.1;transl_table=11 NZ_CPUY01000014.1 RefSeq gene 117987 118520 . + . ID=gene-AD853_RS13745;Name=rplF;gbkey=Gene;gene=rplF;gene_biotype=protein_coding;locus_tag=AD853_RS13745;old_locus_tag=ERS008462_02778 NZ_CPUY01000014.1 Protein Homology CDS 117987 118520 . + 0 ID=cds-WP_002213334.1;Parent=gene-AD853_RS13745;Dbxref=GenBank:WP_002213334.1;Name=WP_002213334.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843,GO:0005840;gbkey=CDS;gene=rplF;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003031129.1;locus_tag=AD853_RS13745;product=50S ribosomal protein L6;protein_id=WP_002213334.1;transl_table=11 NZ_CPUY01000014.1 RefSeq gene 118530 118883 . + . ID=gene-AD853_RS13750;Name=rplR;gbkey=Gene;gene=rplR;gene_biotype=protein_coding;locus_tag=AD853_RS13750;old_locus_tag=ERS008462_02779 NZ_CPUY01000014.1 Protein Homology CDS 118530 118883 . + 0 ID=cds-WP_002213336.1;Parent=gene-AD853_RS13750;Dbxref=GenBank:WP_002213336.1;Name=WP_002213336.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplR;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005970258.1;locus_tag=AD853_RS13750;product=50S ribosomal protein L18;protein_id=WP_002213336.1;transl_table=11 NZ_CPUY01000014.1 RefSeq gene 118898 119401 . + . ID=gene-AD853_RS13755;Name=rpsE;gbkey=Gene;gene=rpsE;gene_biotype=protein_coding;locus_tag=AD853_RS13755;old_locus_tag=ERS008462_02780 NZ_CPUY01000014.1 Protein Homology CDS 118898 119401 . + 0 ID=cds-WP_002213337.1;Parent=gene-AD853_RS13755;Dbxref=GenBank:WP_002213337.1;Name=WP_002213337.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsE;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004106339.1;locus_tag=AD853_RS13755;product=30S ribosomal protein S5;protein_id=WP_002213337.1;transl_table=11 NZ_CPUY01000014.1 RefSeq gene 119404 119583 . + . ID=gene-AD853_RS13760;Name=rpmD;gbkey=Gene;gene=rpmD;gene_biotype=protein_coding;locus_tag=AD853_RS13760;old_locus_tag=ERS008462_02781 NZ_CPUY01000014.1 Protein Homology CDS 119404 119583 . + 0 ID=cds-WP_002213339.1;Parent=gene-AD853_RS13760;Dbxref=GenBank:WP_002213339.1;Name=WP_002213339.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rpmD;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012147215.1;locus_tag=AD853_RS13760;product=50S ribosomal protein L30;protein_id=WP_002213339.1;transl_table=11 NZ_CPUY01000014.1 RefSeq gene 119587 120021 . + . ID=gene-AD853_RS13765;Name=rplO;gbkey=Gene;gene=rplO;gene_biotype=protein_coding;locus_tag=AD853_RS13765;old_locus_tag=ERS008462_02782 NZ_CPUY01000014.1 Protein Homology CDS 119587 120021 . + 0 ID=cds-WP_002213341.1;Parent=gene-AD853_RS13765;Dbxref=GenBank:WP_002213341.1;Name=WP_002213341.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplO;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011095501.1;locus_tag=AD853_RS13765;product=50S ribosomal protein L15;protein_id=WP_002213341.1;transl_table=11 NZ_CPUY01000014.1 RefSeq gene 120029 121360 . + . ID=gene-AD853_RS13770;Name=secY;gbkey=Gene;gene=secY;gene_biotype=protein_coding;locus_tag=AD853_RS13770;old_locus_tag=ERS008462_02783 NZ_CPUY01000014.1 Protein Homology CDS 120029 121360 . + 0 ID=cds-WP_002213344.1;Parent=gene-AD853_RS13770;Dbxref=GenBank:WP_002213344.1;Name=WP_002213344.1;Ontology_term=GO:0015031,GO:0043952,GO:0016020;gbkey=CDS;gene=secY;go_component=membrane|0016020||IEA;go_process=protein transport|0015031||IEA,protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004868351.1;locus_tag=AD853_RS13770;product=preprotein translocase subunit SecY;protein_id=WP_002213344.1;transl_table=11 NZ_CPUY01000014.1 RefSeq gene 121394 121510 . + . ID=gene-AD853_RS13775;Name=rpmJ;gbkey=Gene;gene=rpmJ;gene_biotype=protein_coding;locus_tag=AD853_RS13775;old_locus_tag=ERS008462_02784 NZ_CPUY01000014.1 Protein Homology CDS 121394 121510 . + 0 ID=cds-WP_002227352.1;Parent=gene-AD853_RS13775;Dbxref=GenBank:WP_002227352.1;Name=WP_002227352.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmJ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020322760.1;locus_tag=AD853_RS13775;product=50S ribosomal protein L36;protein_id=WP_002227352.1;transl_table=11 NZ_CPUY01000014.1 RefSeq gene 121658 122014 . + . ID=gene-AD853_RS13780;Name=rpsM;gbkey=Gene;gene=rpsM;gene_biotype=protein_coding;locus_tag=AD853_RS13780 NZ_CPUY01000014.1 Protein Homology CDS 121658 122014 . + 0 ID=cds-WP_002213346.1;Parent=gene-AD853_RS13780;Dbxref=GenBank:WP_002213346.1;Name=WP_002213346.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsM;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018356918.1;locus_tag=AD853_RS13780;product=30S ribosomal protein S13;protein_id=WP_002213346.1;transl_table=11 NZ_CPUY01000014.1 RefSeq gene 122031 122420 . + . ID=gene-AD853_RS13785;Name=rpsK;gbkey=Gene;gene=rpsK;gene_biotype=protein_coding;locus_tag=AD853_RS13785;old_locus_tag=ERS008462_02786 NZ_CPUY01000014.1 Protein Homology CDS 122031 122420 . + 0 ID=cds-WP_002218948.1;Parent=gene-AD853_RS13785;Dbxref=GenBank:WP_002218948.1;Name=WP_002218948.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsK;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001029758.1;locus_tag=AD853_RS13785;product=30S ribosomal protein S11;protein_id=WP_002218948.1;transl_table=11 NZ_CPUY01000014.1 RefSeq gene 122451 123071 . + . ID=gene-AD853_RS13790;Name=rpsD;gbkey=Gene;gene=rpsD;gene_biotype=protein_coding;locus_tag=AD853_RS13790;old_locus_tag=ERS008462_02787 NZ_CPUY01000014.1 Protein Homology CDS 122451 123071 . + 0 ID=cds-WP_002218949.1;Parent=gene-AD853_RS13790;Dbxref=GenBank:WP_002218949.1;Name=WP_002218949.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843,GO:0015935;gbkey=CDS;gene=rpsD;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004410410.1;locus_tag=AD853_RS13790;product=30S ribosomal protein S4;protein_id=WP_002218949.1;transl_table=11 NZ_CPUY01000014.1 RefSeq gene 123097 124086 . + . ID=gene-AD853_RS13795;Name=AD853_RS13795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS13795;old_locus_tag=ERS008462_02788 NZ_CPUY01000014.1 Protein Homology CDS 123097 124086 . + 0 ID=cds-WP_002209013.1;Parent=gene-AD853_RS13795;Dbxref=GenBank:WP_002209013.1;Name=WP_002209013.1;Ontology_term=GO:0006351,GO:0003899;gbkey=CDS;go_function=DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005970247.1;locus_tag=AD853_RS13795;product=DNA-directed RNA polymerase subunit alpha;protein_id=WP_002209013.1;transl_table=11 NZ_CPUY01000014.1 RefSeq gene 124127 124516 . + . ID=gene-AD853_RS13800;Name=rplQ;gbkey=Gene;gene=rplQ;gene_biotype=protein_coding;locus_tag=AD853_RS13800;old_locus_tag=ERS008462_02789 NZ_CPUY01000014.1 Protein Homology CDS 124127 124516 . + 0 ID=cds-WP_002209014.1;Parent=gene-AD853_RS13800;Dbxref=GenBank:WP_002209014.1;Name=WP_002209014.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplQ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013573706.1;locus_tag=AD853_RS13800;product=50S ribosomal protein L17;protein_id=WP_002209014.1;transl_table=11 NZ_CPUY01000014.1 RefSeq gene 124963 125388 . + . ID=gene-AD853_RS13805;Name=zntR;gbkey=Gene;gene=zntR;gene_biotype=protein_coding;locus_tag=AD853_RS13805;old_locus_tag=ERS008462_02790 NZ_CPUY01000014.1 Protein Homology CDS 124963 125388 . + 0 ID=cds-WP_002215702.1;Parent=gene-AD853_RS13805;Dbxref=GenBank:WP_002215702.1;Name=WP_002215702.1;Ontology_term=GO:0006351,GO:0003677,GO:0008270;gbkey=CDS;gene=zntR;go_function=DNA binding|0003677||IEA,zinc ion binding|0008270||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002215702.1;locus_tag=AD853_RS13805;product=Zn(2+)-responsive transcriptional regulator;protein_id=WP_002215702.1;transl_table=11 NZ_CPUY01000014.1 RefSeq gene 125476 125676 . + . ID=gene-AD853_RS13810;Name=AD853_RS13810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS13810;old_locus_tag=ERS008462_02791 NZ_CPUY01000014.1 Protein Homology CDS 125476 125676 . + 0 ID=cds-WP_002209016.1;Parent=gene-AD853_RS13810;Dbxref=GenBank:WP_002209016.1;Name=WP_002209016.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209016.1;locus_tag=AD853_RS13810;product=alternative ribosome-rescue factor A;protein_id=WP_002209016.1;transl_table=11 NZ_CPUY01000014.1 RefSeq gene 125786 126199 . - . ID=gene-AD853_RS13815;Name=mscL;gbkey=Gene;gene=mscL;gene_biotype=protein_coding;locus_tag=AD853_RS13815;old_locus_tag=ERS008462_02792 NZ_CPUY01000014.1 Protein Homology CDS 125786 126199 . - 0 ID=cds-WP_002209017.1;Parent=gene-AD853_RS13815;Dbxref=GenBank:WP_002209017.1;Name=WP_002209017.1;gbkey=CDS;gene=mscL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209017.1;locus_tag=AD853_RS13815;product=large-conductance mechanosensitive channel protein MscL;protein_id=WP_002209017.1;transl_table=11 NZ_CPUY01000014.1 RefSeq gene 126338 127714 . - . ID=gene-AD853_RS13820;Name=trkA;gbkey=Gene;gene=trkA;gene_biotype=protein_coding;locus_tag=AD853_RS13820;old_locus_tag=ERS008462_02793 NZ_CPUY01000014.1 Protein Homology CDS 126338 127714 . - 0 ID=cds-WP_002209018.1;Parent=gene-AD853_RS13820;Dbxref=GenBank:WP_002209018.1;Name=WP_002209018.1;Ontology_term=GO:0006813,GO:0015079,GO:0016020;gbkey=CDS;gene=trkA;go_component=membrane|0016020||IEA;go_function=potassium ion transmembrane transporter activity|0015079||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004125888.1;locus_tag=AD853_RS13820;product=Trk system potassium transporter TrkA;protein_id=WP_002209018.1;transl_table=11 NZ_CPUY01000014.1 RefSeq gene 127770 129059 . - . ID=gene-AD853_RS13825;Name=rsmB;gbkey=Gene;gene=rsmB;gene_biotype=protein_coding;locus_tag=AD853_RS13825;old_locus_tag=ERS008462_02794 NZ_CPUY01000014.1 Protein Homology CDS 127770 129059 . - 0 ID=cds-WP_002215705.1;Parent=gene-AD853_RS13825;Dbxref=GenBank:WP_002215705.1;Name=WP_002215705.1;Ontology_term=GO:0001510,GO:0006355,GO:0006364,GO:0003723,GO:0008649;gbkey=CDS;gene=rsmB;go_function=RNA binding|0003723||IEA,rRNA methyltransferase activity|0008649||IEA;go_process=RNA methylation|0001510||IEA,regulation of DNA-templated transcription|0006355||IEA,rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041854762.1;locus_tag=AD853_RS13825;product=16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB;protein_id=WP_002215705.1;transl_table=11 NZ_CPUY01000014.1 RefSeq gene 129153 130100 . - . ID=gene-AD853_RS13830;Name=fmt;gbkey=Gene;gene=fmt;gene_biotype=protein_coding;locus_tag=AD853_RS13830;old_locus_tag=ERS008462_02795 NZ_CPUY01000014.1 Protein Homology CDS 129153 130100 . - 0 ID=cds-WP_038823944.1;Parent=gene-AD853_RS13830;Dbxref=GenBank:WP_038823944.1;Name=WP_038823944.1;Ontology_term=GO:0071951,GO:0004479,GO:0005737;gbkey=CDS;gene=fmt;go_component=cytoplasm|0005737||IEA;go_function=methionyl-tRNA formyltransferase activity|0004479||IEA;go_process=conversion of methionyl-tRNA to N-formyl-methionyl-tRNA|0071951||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209020.1;locus_tag=AD853_RS13830;product=methionyl-tRNA formyltransferase;protein_id=WP_038823944.1;transl_table=11 NZ_CPUY01000014.1 RefSeq gene 130125 130637 . - . ID=gene-AD853_RS13835;Name=def;gbkey=Gene;gene=def;gene_biotype=protein_coding;locus_tag=AD853_RS13835;old_locus_tag=ERS008462_02796 NZ_CPUY01000014.1 Protein Homology CDS 130125 130637 . - 0 ID=cds-WP_002209021.1;Parent=gene-AD853_RS13835;Dbxref=GenBank:WP_002209021.1;Name=WP_002209021.1;Ontology_term=GO:0036211,GO:0042586;gbkey=CDS;gene=def;go_function=peptide deformylase activity|0042586||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004709217.1;locus_tag=AD853_RS13835;product=peptide deformylase;protein_id=WP_002209021.1;transl_table=11 NZ_CPUY01000014.1 RefSeq gene 130772 131893 . + . ID=gene-AD853_RS13840;Name=dprA;gbkey=Gene;gene=dprA;gene_biotype=protein_coding;locus_tag=AD853_RS13840;old_locus_tag=ERS008462_02797 NZ_CPUY01000014.1 Protein Homology CDS 130772 131893 . + 0 ID=cds-WP_011193215.1;Parent=gene-AD853_RS13840;Dbxref=GenBank:WP_011193215.1;Name=WP_011193215.1;Ontology_term=GO:0009294;gbkey=CDS;gene=dprA;go_process=DNA-mediated transformation|0009294||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011193215.1;locus_tag=AD853_RS13840;product=DNA-protecting protein DprA;protein_id=WP_011193215.1;transl_table=11 NZ_CPUY01000014.1 RefSeq gene 131865 132338 . + . ID=gene-AD853_RS13845;Name=AD853_RS13845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS13845;old_locus_tag=ERS008462_02798 NZ_CPUY01000014.1 Protein Homology CDS 131865 132338 . + 0 ID=cds-WP_002209023.1;Parent=gene-AD853_RS13845;Dbxref=GenBank:WP_002209023.1;Name=WP_002209023.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005134083.1;locus_tag=AD853_RS13845;product=DUF494 family protein;protein_id=WP_002209023.1;transl_table=11 NZ_CPUY01000014.1 RefSeq gene 132379 132918 . + . ID=gene-AD853_RS13850;Name=AD853_RS13850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS13850;old_locus_tag=ERS008462_02799 NZ_CPUY01000014.1 Protein Homology CDS 132379 132918 . + 0 ID=cds-WP_012105865.1;Parent=gene-AD853_RS13850;Dbxref=GenBank:WP_012105865.1;Name=WP_012105865.1;Ontology_term=GO:0006265,GO:0003677,GO:0003917;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA topoisomerase type I (single strand cut%2C ATP-independent) activity|0003917||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002228134.1;locus_tag=AD853_RS13850;product=DNA topoisomerase family protein;protein_id=WP_012105865.1;transl_table=11 NZ_CPUY01000014.1 RefSeq gene 132920 133492 . + . ID=gene-AD853_RS13855;Name=tsaC;gbkey=Gene;gene=tsaC;gene_biotype=protein_coding;locus_tag=AD853_RS13855;old_locus_tag=ERS008462_02800 NZ_CPUY01000014.1 Protein Homology CDS 132920 133492 . + 0 ID=cds-WP_002209025.1;Parent=gene-AD853_RS13855;Dbxref=GenBank:WP_002209025.1;Name=WP_002209025.1;Ontology_term=GO:0002949,GO:0003725,GO:0005524;gbkey=CDS;gene=tsaC;go_function=double-stranded RNA binding|0003725||IEA,ATP binding|0005524||IEA;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209025.1;locus_tag=AD853_RS13855;product=L-threonylcarbamoyladenylate synthase type 1 TsaC;protein_id=WP_002209025.1;transl_table=11 NZ_CPUY01000014.1 RefSeq gene 133501 134322 . + . ID=gene-AD853_RS13860;Name=aroE;gbkey=Gene;gene=aroE;gene_biotype=protein_coding;locus_tag=AD853_RS13860;old_locus_tag=ERS008462_02801 NZ_CPUY01000014.1 Protein Homology CDS 133501 134322 . + 0 ID=cds-WP_002209026.1;Parent=gene-AD853_RS13860;Dbxref=GenBank:WP_002209026.1;Name=WP_002209026.1;Ontology_term=GO:0019632,GO:0004764;gbkey=CDS;gene=aroE;go_function=shikimate 3-dehydrogenase (NADP+) activity|0004764||IEA;go_process=shikimate metabolic process|0019632||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209026.1;locus_tag=AD853_RS13860;product=shikimate dehydrogenase;protein_id=WP_002209026.1;transl_table=11 NZ_CPUY01000014.1 RefSeq gene 134377 134919 . - . ID=gene-AD853_RS13865;Name=AD853_RS13865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS13865;old_locus_tag=ERS008462_02802 NZ_CPUY01000014.1 Protein Homology CDS 134377 134919 . - 0 ID=cds-WP_038823942.1;Parent=gene-AD853_RS13865;Dbxref=GenBank:WP_038823942.1;Name=WP_038823942.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002230372.1;locus_tag=AD853_RS13865;product=gamma carbonic anhydrase family protein;protein_id=WP_038823942.1;transl_table=11 ##sequence-region NZ_CPUY01000015.1 1 119937 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=633 NZ_CPUY01000015.1 RefSeq region 1 119937 . + . ID=NZ_CPUY01000015.1:1..119937;Dbxref=taxon:633;collection-date=1900/2008;country=South Africa;gbkey=Src;genome=genomic;isolation-source=not known;mol_type=genomic DNA;nat-host=pig;serovar=O:3;strain=IP32544 NZ_CPUY01000015.1 RefSeq gene 413 2251 . + . ID=gene-AD853_RS13870;Name=AD853_RS13870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS13870;old_locus_tag=ERS008462_02803 NZ_CPUY01000015.1 Protein Homology CDS 413 2251 . + 0 ID=cds-WP_198287827.1;Parent=gene-AD853_RS13870;Dbxref=GenBank:WP_198287827.1;Name=WP_198287827.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF042472.4;locus_tag=AD853_RS13870;product=ABC-three component system protein;protein_id=WP_198287827.1;transl_table=11 NZ_CPUY01000015.1 RefSeq gene 2317 2916 . + . ID=gene-AD853_RS13875;Name=AD853_RS13875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS13875;old_locus_tag=ERS008462_02804 NZ_CPUY01000015.1 Protein Homology CDS 2317 2916 . + 0 ID=cds-WP_038825270.1;Parent=gene-AD853_RS13875;Dbxref=GenBank:WP_038825270.1;Name=WP_038825270.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF042475.4;locus_tag=AD853_RS13875;product=ABC-three component system middle component 1;protein_id=WP_038825270.1;transl_table=11 NZ_CPUY01000015.1 RefSeq gene 2913 5903 . + . ID=gene-AD853_RS13880;Name=AD853_RS13880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS13880;old_locus_tag=ERS008462_02805 NZ_CPUY01000015.1 Protein Homology CDS 2913 5903 . + 0 ID=cds-WP_050124610.1;Parent=gene-AD853_RS13880;Dbxref=GenBank:WP_050124610.1;Name=WP_050124610.1;Ontology_term=GO:0006302,GO:0016887;gbkey=CDS;go_function=ATP hydrolysis activity|0016887||IEA;go_process=double-strand break repair|0006302||IEA;inference=COORDINATES: protein motif:HMM:NF024867.6;locus_tag=AD853_RS13880;product=AAA family ATPase;protein_id=WP_050124610.1;transl_table=11 NZ_CPUY01000015.1 RefSeq pseudogene 5944 6179 . + . ID=gene-AD853_RS20750;Name=AD853_RS20750;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD853_RS20750;partial=true;pseudo=true;start_range=.,5944 NZ_CPUY01000015.1 Protein Homology CDS 5944 6179 . + 0 ID=cds-AD853_RS20750;Parent=gene-AD853_RS20750;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343613.1;locus_tag=AD853_RS20750;partial=true;product=transposase;pseudo=true;start_range=.,5944;transl_table=11 NZ_CPUY01000015.1 RefSeq gene 6396 7481 . - . ID=gene-AD853_RS13885;Name=AD853_RS13885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS13885;old_locus_tag=ERS008462_02806 NZ_CPUY01000015.1 Protein Homology CDS 6396 7481 . - 0 ID=cds-WP_197276506.1;Parent=gene-AD853_RS13885;Dbxref=GenBank:WP_197276506.1;Name=WP_197276506.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF039631.6;locus_tag=AD853_RS13885;product=DUF6035 family protein;protein_id=WP_197276506.1;transl_table=11 NZ_CPUY01000015.1 RefSeq gene 8010 9209 . - . ID=gene-AD853_RS13890;Name=AD853_RS13890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS13890;old_locus_tag=ERS008462_02807 NZ_CPUY01000015.1 Protein Homology CDS 8010 9209 . - 0 ID=cds-WP_038825267.1;Parent=gene-AD853_RS13890;Dbxref=GenBank:WP_038825267.1;Name=WP_038825267.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004722535.1;locus_tag=AD853_RS13890;product=tyrosine-type recombinase/integrase;protein_id=WP_038825267.1;transl_table=11 NZ_CPUY01000015.1 RefSeq gene 9513 10394 . + . ID=gene-AD853_RS13895;Name=AD853_RS13895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS13895;old_locus_tag=ERS008462_02808 NZ_CPUY01000015.1 Protein Homology CDS 9513 10394 . + 0 ID=cds-WP_032466028.1;Parent=gene-AD853_RS13895;Dbxref=GenBank:WP_032466028.1;Name=WP_032466028.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105825.1;locus_tag=AD853_RS13895;product=ParA family protein;protein_id=WP_032466028.1;transl_table=11 NZ_CPUY01000015.1 RefSeq gene 10387 11748 . + . ID=gene-AD853_RS13900;Name=dnaB-PI;gbkey=Gene;gene=dnaB-PI;gene_biotype=protein_coding;locus_tag=AD853_RS13900;old_locus_tag=ERS008462_02809 NZ_CPUY01000015.1 Protein Homology CDS 10387 11748 . + 0 ID=cds-WP_038825265.1;Parent=gene-AD853_RS13900;Dbxref=GenBank:WP_038825265.1;Name=WP_038825265.1;gbkey=CDS;gene=dnaB-PI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105824.1;locus_tag=AD853_RS13900;product=SPI-7-type island replicative DNA helicase;protein_id=WP_038825265.1;transl_table=11 NZ_CPUY01000015.1 RefSeq gene 11741 13423 . + . ID=gene-AD853_RS13905;Name=AD853_RS13905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS13905;old_locus_tag=ERS008462_02810 NZ_CPUY01000015.1 Protein Homology CDS 11741 13423 . + 0 ID=cds-WP_038825263.1;Parent=gene-AD853_RS13905;Dbxref=GenBank:WP_038825263.1;Name=WP_038825263.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011817115.1;locus_tag=AD853_RS13905;product=ParB family protein;protein_id=WP_038825263.1;transl_table=11 NZ_CPUY01000015.1 RefSeq gene 13420 14001 . + . ID=gene-AD853_RS13910;Name=AD853_RS13910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS13910;old_locus_tag=ERS008462_02811 NZ_CPUY01000015.1 Protein Homology CDS 13420 14001 . + 0 ID=cds-WP_012105822.1;Parent=gene-AD853_RS13910;Dbxref=GenBank:WP_012105822.1;Name=WP_012105822.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105822.1;locus_tag=AD853_RS13910;product=DUF2857 domain-containing protein;protein_id=WP_012105822.1;transl_table=11 NZ_CPUY01000015.1 RefSeq gene 14001 14231 . + . ID=gene-AD853_RS13915;Name=AD853_RS13915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS13915;old_locus_tag=ERS008462_02812 NZ_CPUY01000015.1 Protein Homology CDS 14001 14231 . + 0 ID=cds-WP_038825260.1;Parent=gene-AD853_RS13915;Dbxref=GenBank:WP_038825260.1;Name=WP_038825260.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013095148.1;locus_tag=AD853_RS13915;product=ParE family toxin-like protein;protein_id=WP_038825260.1;transl_table=11 NZ_CPUY01000015.1 RefSeq gene 14467 15666 . + . ID=gene-AD853_RS13920;Name=AD853_RS13920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS13920;old_locus_tag=ERS008462_02813 NZ_CPUY01000015.1 Protein Homology CDS 14467 15666 . + 0 ID=cds-WP_012105820.1;Parent=gene-AD853_RS13920;Dbxref=GenBank:WP_012105820.1;Name=WP_012105820.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105820.1;locus_tag=AD853_RS13920;product=STY4528 family pathogenicity island replication protein;protein_id=WP_012105820.1;transl_table=11 NZ_CPUY01000015.1 RefSeq gene 15826 16584 . + . ID=gene-AD853_RS13925;Name=AD853_RS13925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS13925;old_locus_tag=ERS008462_02814 NZ_CPUY01000015.1 Protein Homology CDS 15826 16584 . + 0 ID=cds-WP_050124611.1;Parent=gene-AD853_RS13925;Dbxref=GenBank:WP_050124611.1;Name=WP_050124611.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105819.1;locus_tag=AD853_RS13925;product=PFL_4669 family integrating conjugative element protein;protein_id=WP_050124611.1;transl_table=11 NZ_CPUY01000015.1 RefSeq gene 16885 17442 . + . ID=gene-AD853_RS13930;Name=AD853_RS13930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS13930;old_locus_tag=ERS008462_02816 NZ_CPUY01000015.1 Protein Homology CDS 16885 17442 . + 0 ID=cds-WP_038823847.1;Parent=gene-AD853_RS13930;Dbxref=GenBank:WP_038823847.1;Name=WP_038823847.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105817.1;locus_tag=AD853_RS13930;product=STY4534 family ICE replication protein;protein_id=WP_038823847.1;transl_table=11 NZ_CPUY01000015.1 RefSeq gene 17645 18076 . + . ID=gene-AD853_RS13935;Name=AD853_RS13935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS13935;old_locus_tag=ERS008462_02817 NZ_CPUY01000015.1 Protein Homology CDS 17645 18076 . + 0 ID=cds-WP_038823854.1;Parent=gene-AD853_RS13935;Dbxref=GenBank:WP_038823854.1;Name=WP_038823854.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011148236.1;locus_tag=AD853_RS13935;product=DUF29 domain-containing protein;protein_id=WP_038823854.1;transl_table=11 NZ_CPUY01000015.1 RefSeq gene 18247 18480 . + . ID=gene-AD853_RS13940;Name=AD853_RS13940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS13940;old_locus_tag=ERS008462_02818 NZ_CPUY01000015.1 Protein Homology CDS 18247 18480 . + 0 ID=cds-WP_012105815.1;Parent=gene-AD853_RS13940;Dbxref=GenBank:WP_012105815.1;Name=WP_012105815.1;Ontology_term=GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105815.1;locus_tag=AD853_RS13940;product=type II toxin-antitoxin system Phd/YefM family antitoxin;protein_id=WP_012105815.1;transl_table=11 NZ_CPUY01000015.1 RefSeq gene 18477 18863 . + . ID=gene-AD853_RS13945;Name=AD853_RS13945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS13945;old_locus_tag=ERS008462_02819 NZ_CPUY01000015.1 Protein Homology CDS 18477 18863 . + 0 ID=cds-WP_012105814.1;Parent=gene-AD853_RS13945;Dbxref=GenBank:WP_012105814.1;Name=WP_012105814.1;Ontology_term=GO:0004540,GO:0090729,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=RNA nuclease activity|0004540||IEA,toxin activity|0090729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105814.1;locus_tag=AD853_RS13945;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_012105814.1;transl_table=11 NZ_CPUY01000015.1 RefSeq gene 19001 20071 . + . ID=gene-AD853_RS13950;Name=pilL2;gbkey=Gene;gene=pilL2;gene_biotype=protein_coding;locus_tag=AD853_RS13950;old_locus_tag=ERS008462_02820 NZ_CPUY01000015.1 Protein Homology CDS 19001 20071 . + 0 ID=cds-WP_038834744.1;Parent=gene-AD853_RS13950;Dbxref=GenBank:WP_038834744.1;Name=WP_038834744.1;gbkey=CDS;gene=pilL2;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105813.1;locus_tag=AD853_RS13950;product=PFGI-1 class ICE element type IV pilus protein PilL2;protein_id=WP_038834744.1;transl_table=11 NZ_CPUY01000015.1 RefSeq gene 20073 20510 . + . ID=gene-AD853_RS13955;Name=pilM;gbkey=Gene;gene=pilM;gene_biotype=protein_coding;locus_tag=AD853_RS13955;old_locus_tag=ERS008462_02821 NZ_CPUY01000015.1 Protein Homology CDS 20073 20510 . + 0 ID=cds-WP_038823845.1;Parent=gene-AD853_RS13955;Dbxref=GenBank:WP_038823845.1;Name=WP_038823845.1;gbkey=CDS;gene=pilM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105812.1;locus_tag=AD853_RS13955;product=type IV pilus biogenesis protein PilM;protein_id=WP_038823845.1;transl_table=11 NZ_CPUY01000015.1 RefSeq gene 20524 22116 . + . ID=gene-AD853_RS13960;Name=pilN;gbkey=Gene;gene=pilN;gene_biotype=protein_coding;locus_tag=AD853_RS13960;old_locus_tag=ERS008462_02822 NZ_CPUY01000015.1 Protein Homology CDS 20524 22116 . + 0 ID=cds-WP_038823844.1;Parent=gene-AD853_RS13960;Dbxref=GenBank:WP_038823844.1;Name=WP_038823844.1;Ontology_term=GO:0009297,GO:0009306,GO:0019867;gbkey=CDS;gene=pilN;go_component=outer membrane|0019867||IEA;go_process=pilus assembly|0009297||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105811.1;locus_tag=AD853_RS13960;product=PilN family type IVB pilus formation outer membrane protein;protein_id=WP_038823844.1;transl_table=11 NZ_CPUY01000015.1 RefSeq gene 22119 23456 . + . ID=gene-AD853_RS13965;Name=pilO2;gbkey=Gene;gene=pilO2;gene_biotype=protein_coding;locus_tag=AD853_RS13965;old_locus_tag=ERS008462_02823 NZ_CPUY01000015.1 Protein Homology CDS 22119 23456 . + 0 ID=cds-WP_050124612.1;Parent=gene-AD853_RS13965;Dbxref=GenBank:WP_050124612.1;Name=WP_050124612.1;gbkey=CDS;gene=pilO2;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105810.1;locus_tag=AD853_RS13965;product=type 4b pilus protein PilO2;protein_id=WP_050124612.1;transl_table=11 NZ_CPUY01000015.1 RefSeq gene 23443 23937 . + . ID=gene-AD853_RS13970;Name=pilP;gbkey=Gene;gene=pilP;gene_biotype=protein_coding;locus_tag=AD853_RS13970;old_locus_tag=ERS008462_02824 NZ_CPUY01000015.1 Protein Homology CDS 23443 23937 . + 0 ID=cds-WP_038823842.1;Parent=gene-AD853_RS13970;Dbxref=GenBank:WP_038823842.1;Name=WP_038823842.1;Ontology_term=GO:0009297;gbkey=CDS;gene=pilP;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105809.1;locus_tag=AD853_RS13970;product=type IV pilus biogenesis protein PilP;protein_id=WP_038823842.1;transl_table=11 NZ_CPUY01000015.1 RefSeq gene 23947 25500 . + . ID=gene-AD853_RS13975;Name=AD853_RS13975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS13975;old_locus_tag=ERS008462_02825 NZ_CPUY01000015.1 Protein Homology CDS 23947 25500 . + 0 ID=cds-WP_038823841.1;Parent=gene-AD853_RS13975;Dbxref=GenBank:WP_038823841.1;Name=WP_038823841.1;Ontology_term=GO:0009306,GO:0005524,GO:0016887,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105808.1;locus_tag=AD853_RS13975;product=GspE/PulE family protein;protein_id=WP_038823841.1;transl_table=11 NZ_CPUY01000015.1 RefSeq gene 25493 26602 . + . ID=gene-AD853_RS13980;Name=AD853_RS13980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS13980;old_locus_tag=ERS008462_02826 NZ_CPUY01000015.1 Protein Homology CDS 25493 26602 . + 0 ID=cds-WP_038823840.1;Parent=gene-AD853_RS13980;Dbxref=GenBank:WP_038823840.1;Name=WP_038823840.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011817102.1;locus_tag=AD853_RS13980;product=type II secretion system F family protein;protein_id=WP_038823840.1;transl_table=11 NZ_CPUY01000015.1 RefSeq gene 26617 27204 . + . ID=gene-AD853_RS13985;Name=AD853_RS13985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS13985;old_locus_tag=ERS008462_02827 NZ_CPUY01000015.1 Protein Homology CDS 26617 27204 . + 0 ID=cds-WP_032466038.1;Parent=gene-AD853_RS13985;Dbxref=GenBank:WP_032466038.1;Name=WP_032466038.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105806.1;locus_tag=AD853_RS13985;product=type 4 pilus major pilin;protein_id=WP_032466038.1;transl_table=11 NZ_CPUY01000015.1 RefSeq gene 27201 27869 . + . ID=gene-AD853_RS13990;Name=AD853_RS13990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS13990;old_locus_tag=ERS008462_02828 NZ_CPUY01000015.1 Protein Homology CDS 27201 27869 . + 0 ID=cds-WP_038823838.1;Parent=gene-AD853_RS13990;Dbxref=GenBank:WP_038823838.1;Name=WP_038823838.1;Ontology_term=GO:0004190,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=aspartic-type endopeptidase activity|0004190||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105805.1;locus_tag=AD853_RS13990;product=prepilin peptidase;protein_id=WP_038823838.1;transl_table=11 NZ_CPUY01000015.1 RefSeq gene 27873 29150 . + . ID=gene-AD853_RS13995;Name=pilV;gbkey=Gene;gene=pilV;gene_biotype=protein_coding;locus_tag=AD853_RS13995;old_locus_tag=ERS008462_02829 NZ_CPUY01000015.1 Protein Homology CDS 27873 29150 . + 0 ID=cds-WP_038823837.1;Parent=gene-AD853_RS13995;Dbxref=GenBank:WP_038823837.1;Name=WP_038823837.1;gbkey=CDS;gene=pilV;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105804.1;locus_tag=AD853_RS13995;product=shufflon system plasmid conjugative transfer pilus tip adhesin PilV;protein_id=WP_038823837.1;transl_table=11 NZ_CPUY01000015.1 RefSeq gene 29244 30164 . + . ID=gene-AD853_RS14000;Name=AD853_RS14000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS14000;old_locus_tag=ERS008462_02830 NZ_CPUY01000015.1 Protein Homology CDS 29244 30164 . + 0 ID=cds-WP_048677776.1;Parent=gene-AD853_RS14000;Dbxref=GenBank:WP_048677776.1;Name=WP_048677776.1;Ontology_term=GO:0006310,GO:0015074,GO:0032196,GO:0003677,GO:0004536,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA nuclease activity|0004536||IEA,transposase activity|0004803||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA,transposition|0032196||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105803.1;locus_tag=AD853_RS14000;product=Rpn family recombination-promoting nuclease/putative transposase;protein_id=WP_048677776.1;transl_table=11 NZ_CPUY01000015.1 RefSeq pseudogene 30479 30679 . - . ID=gene-AD853_RS22235;Name=AD853_RS22235;end_range=30679,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD853_RS22235;partial=true;pseudo=true NZ_CPUY01000015.1 Protein Homology CDS 30479 30679 . - 0 ID=cds-AD853_RS22235;Parent=gene-AD853_RS22235;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=30679,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105801.1;locus_tag=AD853_RS22235;partial=true;product=helix-turn-helix domain-containing protein;pseudo=true;transl_table=11 NZ_CPUY01000015.1 RefSeq gene 30692 31204 . - . ID=gene-AD853_RS14010;Name=AD853_RS14010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS14010 NZ_CPUY01000015.1 GeneMarkS-2+ CDS 30692 31204 . - 0 ID=cds-WP_038831794.1;Parent=gene-AD853_RS14010;Dbxref=GenBank:WP_038831794.1;Name=WP_038831794.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AD853_RS14010;product=HEPN domain-containing protein;protein_id=WP_038831794.1;transl_table=11 NZ_CPUY01000015.1 RefSeq gene 31265 31603 . - . ID=gene-AD853_RS14015;Name=AD853_RS14015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS14015;old_locus_tag=ERS008462_02831 NZ_CPUY01000015.1 GeneMarkS-2+ CDS 31265 31603 . - 0 ID=cds-WP_038823835.1;Parent=gene-AD853_RS14015;Dbxref=GenBank:WP_038823835.1;Name=WP_038823835.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AD853_RS14015;product=hypothetical protein;protein_id=WP_038823835.1;transl_table=11 NZ_CPUY01000015.1 RefSeq gene 31986 32348 . + . ID=gene-AD853_RS14020;Name=AD853_RS14020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS14020;old_locus_tag=ERS008462_02832 NZ_CPUY01000015.1 Protein Homology CDS 31986 32348 . + 0 ID=cds-WP_038401988.1;Parent=gene-AD853_RS14020;Dbxref=GenBank:WP_038401988.1;Name=WP_038401988.1;Ontology_term=GO:0004519,GO:0090729,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=endonuclease activity|0004519||IEA,toxin activity|0090729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015836339.1;locus_tag=AD853_RS14020;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_038401988.1;transl_table=11 NZ_CPUY01000015.1 RefSeq gene 32345 32683 . + . ID=gene-AD853_RS14025;Name=AD853_RS14025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS14025;old_locus_tag=ERS008462_02833 NZ_CPUY01000015.1 Protein Homology CDS 32345 32683 . + 0 ID=cds-WP_025381181.1;Parent=gene-AD853_RS14025;Dbxref=GenBank:WP_025381181.1;Name=WP_025381181.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015836340.1;locus_tag=AD853_RS14025;product=helix-turn-helix domain-containing protein;protein_id=WP_025381181.1;transl_table=11 NZ_CPUY01000015.1 RefSeq gene 32726 32968 . + . ID=gene-AD853_RS20755;Name=AD853_RS20755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS20755;old_locus_tag=ERS008462_02834 NZ_CPUY01000015.1 Protein Homology CDS 32726 32968 . + 0 ID=cds-WP_268989588.1;Parent=gene-AD853_RS20755;Dbxref=GenBank:WP_268989588.1;Name=WP_268989588.1;Ontology_term=GO:0008219,GO:0004540;gbkey=CDS;go_function=RNA nuclease activity|0004540||IEA;go_process=cell death|0008219||IEA;inference=COORDINATES: protein motif:HMM:TIGR02683.1;locus_tag=AD853_RS20755;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_268989588.1;transl_table=11 NZ_CPUY01000015.1 RefSeq gene 32971 33267 . + . ID=gene-AD853_RS14030;Name=AD853_RS14030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS14030;old_locus_tag=ERS008462_02835 NZ_CPUY01000015.1 GeneMarkS-2+ CDS 32971 33267 . + 0 ID=cds-WP_038823834.1;Parent=gene-AD853_RS14030;Dbxref=GenBank:WP_038823834.1;Name=WP_038823834.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AD853_RS14030;product=hypothetical protein;protein_id=WP_038823834.1;transl_table=11 NZ_CPUY01000015.1 RefSeq gene 33360 33533 . - . ID=gene-AD853_RS21860;Name=AD853_RS21860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS21860;old_locus_tag=ERS008462_02836 NZ_CPUY01000015.1 Protein Homology CDS 33360 33533 . - 0 ID=cds-WP_004705581.1;Parent=gene-AD853_RS21860;Dbxref=GenBank:WP_004705581.1;Name=WP_004705581.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000106745.1;locus_tag=AD853_RS21860;product=hypothetical protein;protein_id=WP_004705581.1;transl_table=11 NZ_CPUY01000015.1 RefSeq gene 33668 33874 . + . ID=gene-AD853_RS14035;Name=AD853_RS14035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS14035;old_locus_tag=ERS008462_02837 NZ_CPUY01000015.1 Protein Homology CDS 33668 33874 . + 0 ID=cds-WP_012105800.1;Parent=gene-AD853_RS14035;Dbxref=GenBank:WP_012105800.1;Name=WP_012105800.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105800.1;locus_tag=AD853_RS14035;product=hypothetical protein;protein_id=WP_012105800.1;transl_table=11 NZ_CPUY01000015.1 RefSeq gene 33864 34196 . + . ID=gene-AD853_RS14040;Name=AD853_RS14040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS14040;old_locus_tag=ERS008462_02838 NZ_CPUY01000015.1 Protein Homology CDS 33864 34196 . + 0 ID=cds-WP_012105799.1;Parent=gene-AD853_RS14040;Dbxref=GenBank:WP_012105799.1;Name=WP_012105799.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105799.1;locus_tag=AD853_RS14040;product=hypothetical protein;protein_id=WP_012105799.1;transl_table=11 NZ_CPUY01000015.1 RefSeq gene 34288 35106 . + . ID=gene-AD853_RS14045;Name=AD853_RS14045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS14045;old_locus_tag=ERS008462_02839 NZ_CPUY01000015.1 Protein Homology CDS 34288 35106 . + 0 ID=cds-WP_162471854.1;Parent=gene-AD853_RS14045;Dbxref=GenBank:WP_162471854.1;Name=WP_162471854.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105798.1;locus_tag=AD853_RS14045;product=TIGR03759 family integrating conjugative element protein;protein_id=WP_162471854.1;transl_table=11 NZ_CPUY01000015.1 RefSeq gene 35085 35723 . + . ID=gene-AD853_RS14050;Name=AD853_RS14050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS14050;old_locus_tag=ERS008462_02840 NZ_CPUY01000015.1 Protein Homology CDS 35085 35723 . + 0 ID=cds-WP_038823833.1;Parent=gene-AD853_RS14050;Dbxref=GenBank:WP_038823833.1;Name=WP_038823833.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105797.1;locus_tag=AD853_RS14050;product=transglycosylase SLT domain-containing protein;protein_id=WP_038823833.1;transl_table=11 NZ_CPUY01000015.1 RefSeq gene 35720 35854 . + . ID=gene-AD853_RS22515;Name=AD853_RS22515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS22515;old_locus_tag=ERS008462_02841 NZ_CPUY01000015.1 GeneMarkS-2+ CDS 35720 35854 . + 0 ID=cds-WP_317889200.1;Parent=gene-AD853_RS22515;Dbxref=GenBank:WP_317889200.1;Name=WP_317889200.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AD853_RS22515;product=hypothetical protein;protein_id=WP_317889200.1;transl_table=11 NZ_CPUY01000015.1 RefSeq gene 35885 36241 . + . ID=gene-AD853_RS14055;Name=AD853_RS14055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS14055;old_locus_tag=ERS008462_02842 NZ_CPUY01000015.1 Protein Homology CDS 35885 36241 . + 0 ID=cds-WP_317889199.1;Parent=gene-AD853_RS14055;Dbxref=GenBank:WP_317889199.1;Name=WP_317889199.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022523.6;locus_tag=AD853_RS14055;product=integrating conjugative element protein;protein_id=WP_317889199.1;transl_table=11 NZ_CPUY01000015.1 RefSeq pseudogene 36300 38421 . + . ID=gene-AD853_RS14060;Name=traD;gbkey=Gene;gene=traD;gene_biotype=pseudogene;locus_tag=AD853_RS14060;pseudo=true NZ_CPUY01000015.1 Protein Homology CDS 36300 38421 . + 0 ID=cds-AD853_RS14060;Parent=gene-AD853_RS14060;Note=frameshifted;gbkey=CDS;gene=traD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011817091.1;locus_tag=AD853_RS14060;product=type IV conjugative transfer system coupling protein TraD;pseudo=true;transl_table=11 NZ_CPUY01000015.1 RefSeq gene 38421 39173 . + . ID=gene-AD853_RS14065;Name=AD853_RS14065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS14065;old_locus_tag=ERS008462_02845 NZ_CPUY01000015.1 Protein Homology CDS 38421 39173 . + 0 ID=cds-WP_025381176.1;Parent=gene-AD853_RS14065;Dbxref=GenBank:WP_025381176.1;Name=WP_025381176.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105794.1;locus_tag=AD853_RS14065;product=TIGR03747 family integrating conjugative element membrane protein;protein_id=WP_025381176.1;transl_table=11 NZ_CPUY01000015.1 RefSeq gene 39324 40016 . - . ID=gene-AD853_RS14070;Name=AD853_RS14070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS14070;old_locus_tag=ERS008462_02846 NZ_CPUY01000015.1 GeneMarkS-2+ CDS 39324 40016 . - 0 ID=cds-WP_032466044.1;Parent=gene-AD853_RS14070;Dbxref=GenBank:WP_032466044.1;Name=WP_032466044.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AD853_RS14070;product=hypothetical protein;protein_id=WP_032466044.1;transl_table=11 NZ_CPUY01000015.1 RefSeq gene 40077 40505 . - . ID=gene-AD853_RS14075;Name=AD853_RS14075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS14075;old_locus_tag=ERS008462_02847 NZ_CPUY01000015.1 GeneMarkS-2+ CDS 40077 40505 . - 0 ID=cds-WP_032466045.1;Parent=gene-AD853_RS14075;Dbxref=GenBank:WP_032466045.1;Name=WP_032466045.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AD853_RS14075;product=hypothetical protein;protein_id=WP_032466045.1;transl_table=11 NZ_CPUY01000015.1 RefSeq gene 40931 41239 . + . ID=gene-AD853_RS14080;Name=AD853_RS14080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS14080;old_locus_tag=ERS008462_02848 NZ_CPUY01000015.1 Protein Homology CDS 40931 41239 . + 0 ID=cds-WP_038823832.1;Parent=gene-AD853_RS14080;Dbxref=GenBank:WP_038823832.1;Name=WP_038823832.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105790.1;locus_tag=AD853_RS14080;product=integrative conjugative element protein%2C RAQPRD family;protein_id=WP_038823832.1;transl_table=11 NZ_CPUY01000015.1 RefSeq gene 41239 41484 . + . ID=gene-AD853_RS14085;Name=AD853_RS14085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS14085;old_locus_tag=ERS008462_02849 NZ_CPUY01000015.1 Protein Homology CDS 41239 41484 . + 0 ID=cds-WP_012105789.1;Parent=gene-AD853_RS14085;Dbxref=GenBank:WP_012105789.1;Name=WP_012105789.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105789.1;locus_tag=AD853_RS14085;product=TIGR03758 family integrating conjugative element protein;protein_id=WP_012105789.1;transl_table=11 NZ_CPUY01000015.1 RefSeq gene 41500 41850 . + . ID=gene-AD853_RS14090;Name=AD853_RS14090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS14090;old_locus_tag=ERS008462_02850 NZ_CPUY01000015.1 Protein Homology CDS 41500 41850 . + 0 ID=cds-WP_012105788.1;Parent=gene-AD853_RS14090;Dbxref=GenBank:WP_012105788.1;Name=WP_012105788.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105788.1;locus_tag=AD853_RS14090;product=TIGR03745 family integrating conjugative element membrane protein;protein_id=WP_012105788.1;transl_table=11 NZ_CPUY01000015.1 RefSeq gene 41860 42234 . + . ID=gene-AD853_RS14095;Name=AD853_RS14095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS14095;old_locus_tag=ERS008462_02851 NZ_CPUY01000015.1 Protein Homology CDS 41860 42234 . + 0 ID=cds-WP_038823831.1;Parent=gene-AD853_RS14095;Dbxref=GenBank:WP_038823831.1;Name=WP_038823831.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105787.1;locus_tag=AD853_RS14095;product=TIGR03750 family conjugal transfer protein;protein_id=WP_038823831.1;transl_table=11 NZ_CPUY01000015.1 RefSeq pseudogene 42324 42740 . + . ID=gene-AD853_RS14100;Name=AD853_RS14100;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD853_RS14100;old_locus_tag=ERS008462_02852;partial=true;pseudo=true;start_range=.,42324 NZ_CPUY01000015.1 Protein Homology CDS 42324 42740 . + 0 ID=cds-AD853_RS14100;Parent=gene-AD853_RS14100;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014539520.1;locus_tag=AD853_RS14100;partial=true;product=TIGR03752 family integrating conjugative element protein;pseudo=true;start_range=.,42324;transl_table=11 NZ_CPUY01000015.1 RefSeq gene 42753 43154 . + . ID=gene-AD853_RS14105;Name=AD853_RS14105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS14105;old_locus_tag=ERS008462_02853 NZ_CPUY01000015.1 Protein Homology CDS 42753 43154 . + 0 ID=cds-WP_025381170.1;Parent=gene-AD853_RS14105;Dbxref=GenBank:WP_025381170.1;Name=WP_025381170.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105781.1;locus_tag=AD853_RS14105;product=TIGR03751 family conjugal transfer lipoprotein;protein_id=WP_025381170.1;transl_table=11 NZ_CPUY01000015.1 RefSeq gene 43151 46000 . + . ID=gene-AD853_RS14110;Name=AD853_RS14110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS14110;old_locus_tag=ERS008462_02854 NZ_CPUY01000015.1 Protein Homology CDS 43151 46000 . + 0 ID=cds-WP_050124613.1;Parent=gene-AD853_RS14110;Dbxref=GenBank:WP_050124613.1;Name=WP_050124613.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105780.1;locus_tag=AD853_RS14110;product=conjugative transfer ATPase;protein_id=WP_050124613.1;transl_table=11 NZ_CPUY01000015.1 RefSeq gene 46357 48225 . - . ID=gene-AD853_RS14115;Name=AD853_RS14115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS14115;old_locus_tag=ERS008462_02855 NZ_CPUY01000015.1 Protein Homology CDS 46357 48225 . - 0 ID=cds-WP_080619175.1;Parent=gene-AD853_RS14115;Dbxref=GenBank:WP_080619175.1;Name=WP_080619175.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: protein motif:HMM:NF024642.6;locus_tag=AD853_RS14115;product=UvrD-helicase domain-containing protein;protein_id=WP_080619175.1;transl_table=11 NZ_CPUY01000015.1 RefSeq gene 48228 50627 . - . ID=gene-AD853_RS14120;Name=AD853_RS14120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS14120;old_locus_tag=ERS008462_02856 NZ_CPUY01000015.1 Protein Homology CDS 48228 50627 . - 0 ID=cds-WP_038823827.1;Parent=gene-AD853_RS14120;Dbxref=GenBank:WP_038823827.1;Name=WP_038823827.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024573.6;locus_tag=AD853_RS14120;product=AAA family ATPase;protein_id=WP_038823827.1;transl_table=11 NZ_CPUY01000015.1 RefSeq pseudogene 51045 51879 . - . ID=gene-AD853_RS14125;Name=AD853_RS14125;end_range=51879,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD853_RS14125;old_locus_tag=ERS008462_02857;partial=true;pseudo=true NZ_CPUY01000015.1 Protein Homology CDS 51045 51879 . - 0 ID=cds-AD853_RS14125;Parent=gene-AD853_RS14125;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=51879,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009113442.1;locus_tag=AD853_RS14125;partial=true;product=IS110 family transposase;pseudo=true;transl_table=11 NZ_CPUY01000015.1 RefSeq pseudogene 51930 52235 . - . ID=gene-AD853_RS22240;Name=AD853_RS22240;end_range=52235,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD853_RS22240;partial=true;pseudo=true NZ_CPUY01000015.1 Protein Homology CDS 51930 52235 . - 0 ID=cds-AD853_RS22240;Parent=gene-AD853_RS22240;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=52235,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001368704.1;locus_tag=AD853_RS22240;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_CPUY01000015.1 RefSeq gene 52165 52584 . - . ID=gene-AD853_RS22245;Name=AD853_RS22245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS22245;old_locus_tag=ERS008462_02858 NZ_CPUY01000015.1 Protein Homology CDS 52165 52584 . - 0 ID=cds-WP_071990093.1;Parent=gene-AD853_RS22245;Dbxref=GenBank:WP_071990093.1;Name=WP_071990093.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF026041.6;locus_tag=AD853_RS22245;product=ISL3 family transposase;protein_id=WP_071990093.1;transl_table=11 NZ_CPUY01000015.1 RefSeq pseudogene 52714 52880 . - . ID=gene-AD853_RS21595;Name=AD853_RS21595;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD853_RS21595;old_locus_tag=ERS008462_02859;partial=true;pseudo=true;start_range=.,52714 NZ_CPUY01000015.1 Protein Homology CDS 52714 52880 . - 0 ID=cds-AD853_RS21595;Parent=gene-AD853_RS21595;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000219087.1;locus_tag=AD853_RS21595;partial=true;product=IS110 family transposase;pseudo=true;start_range=.,52714;transl_table=11 NZ_CPUY01000015.1 RefSeq gene 53260 57081 . - . ID=gene-AD853_RS14140;Name=dsr1;gbkey=Gene;gene=dsr1;gene_biotype=protein_coding;locus_tag=AD853_RS14140;old_locus_tag=ERS008462_02860 NZ_CPUY01000015.1 Protein Homology CDS 53260 57081 . - 0 ID=cds-WP_038823824.1;Parent=gene-AD853_RS14140;Dbxref=GenBank:WP_038823824.1;Name=WP_038823824.1;gbkey=CDS;gene=dsr1;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001159683.1;locus_tag=AD853_RS14140;product=anti-phage defense-associated sirtuin Dsr1;protein_id=WP_038823824.1;transl_table=11 NZ_CPUY01000015.1 RefSeq gene 57672 58076 . + . ID=gene-AD853_RS14145;Name=AD853_RS14145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS14145;old_locus_tag=ERS008462_02861 NZ_CPUY01000015.1 Protein Homology CDS 57672 58076 . + 0 ID=cds-WP_012105777.1;Parent=gene-AD853_RS14145;Dbxref=GenBank:WP_012105777.1;Name=WP_012105777.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105777.1;locus_tag=AD853_RS14145;product=TIGR03757 family integrating conjugative element protein;protein_id=WP_012105777.1;transl_table=11 NZ_CPUY01000015.1 RefSeq gene 58073 59026 . + . ID=gene-AD853_RS14150;Name=AD853_RS14150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS14150;old_locus_tag=ERS008462_02862 NZ_CPUY01000015.1 Protein Homology CDS 58073 59026 . + 0 ID=cds-WP_038824677.1;Parent=gene-AD853_RS14150;Dbxref=GenBank:WP_038824677.1;Name=WP_038824677.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105776.1;locus_tag=AD853_RS14150;product=TIGR03756 family integrating conjugative element protein;protein_id=WP_038824677.1;transl_table=11 NZ_CPUY01000015.1 RefSeq gene 59080 60453 . + . ID=gene-AD853_RS14155;Name=AD853_RS14155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS14155;old_locus_tag=ERS008462_02863 NZ_CPUY01000015.1 Protein Homology CDS 59080 60453 . + 0 ID=cds-WP_050124617.1;Parent=gene-AD853_RS14155;Dbxref=GenBank:WP_050124617.1;Name=WP_050124617.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105775.1;locus_tag=AD853_RS14155;product=integrating conjugative element protein;protein_id=WP_050124617.1;transl_table=11 NZ_CPUY01000015.1 RefSeq gene 60453 61955 . + . ID=gene-AD853_RS14160;Name=AD853_RS14160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS14160;old_locus_tag=ERS008462_02864 NZ_CPUY01000015.1 Protein Homology CDS 60453 61955 . + 0 ID=cds-WP_038824679.1;Parent=gene-AD853_RS14160;Dbxref=GenBank:WP_038824679.1;Name=WP_038824679.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000126397.1;locus_tag=AD853_RS14160;product=conjugal transfer protein TraG N-terminal domain-containing protein;protein_id=WP_038824679.1;transl_table=11 NZ_CPUY01000015.1 RefSeq gene 62007 62303 . - . ID=gene-AD853_RS14165;Name=AD853_RS14165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS14165;old_locus_tag=ERS008462_02865 NZ_CPUY01000015.1 Protein Homology CDS 62007 62303 . - 0 ID=cds-WP_012105773.1;Parent=gene-AD853_RS14165;Dbxref=GenBank:WP_012105773.1;Name=WP_012105773.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019105559.1;locus_tag=AD853_RS14165;product=hypothetical protein;protein_id=WP_012105773.1;transl_table=11 NZ_CPUY01000015.1 RefSeq gene 63432 64322 . + . ID=gene-AD853_RS14170;Name=AD853_RS14170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS14170;old_locus_tag=ERS008462_02867 NZ_CPUY01000015.1 Protein Homology CDS 63432 64322 . + 0 ID=cds-WP_038824681.1;Parent=gene-AD853_RS14170;Dbxref=GenBank:WP_038824681.1;Name=WP_038824681.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105772.1;locus_tag=AD853_RS14170;product=integrase domain-containing protein;protein_id=WP_038824681.1;transl_table=11 NZ_CPUY01000015.1 RefSeq gene 64664 65281 . - . ID=gene-AD853_RS14175;Name=AD853_RS14175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS14175;old_locus_tag=ERS008462_02868 NZ_CPUY01000015.1 Protein Homology CDS 64664 65281 . - 0 ID=cds-WP_012105768.1;Parent=gene-AD853_RS14175;Dbxref=GenBank:WP_012105768.1;Name=WP_012105768.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105768.1;locus_tag=AD853_RS14175;product=hypothetical protein;protein_id=WP_012105768.1;transl_table=11 NZ_CPUY01000015.1 RefSeq gene 65297 69556 . - . ID=gene-AD853_RS14180;Name=AD853_RS14180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS14180;old_locus_tag=ERS008462_02869 NZ_CPUY01000015.1 Protein Homology CDS 65297 69556 . - 0 ID=cds-WP_038824682.1;Parent=gene-AD853_RS14180;Dbxref=GenBank:WP_038824682.1;Name=WP_038824682.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105767.1;locus_tag=AD853_RS14180;product=RHS repeat-associated core domain-containing protein;protein_id=WP_038824682.1;transl_table=11 NZ_CPUY01000015.1 RefSeq gene 69587 70018 . - . ID=gene-AD853_RS14185;Name=AD853_RS14185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS14185;old_locus_tag=ERS008462_02870 NZ_CPUY01000015.1 Protein Homology CDS 69587 70018 . - 0 ID=cds-WP_038824683.1;Parent=gene-AD853_RS14185;Dbxref=GenBank:WP_038824683.1;Name=WP_038824683.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105766.1;locus_tag=AD853_RS14185;product=DUF1795 domain-containing protein;protein_id=WP_038824683.1;transl_table=11 NZ_CPUY01000015.1 RefSeq gene 70682 71653 . + . ID=gene-AD853_RS14190;Name=AD853_RS14190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS14190;old_locus_tag=ERS008462_02872 NZ_CPUY01000015.1 Protein Homology CDS 70682 71653 . + 0 ID=cds-WP_038825228.1;Parent=gene-AD853_RS14190;Dbxref=GenBank:WP_038825228.1;Name=WP_038825228.1;Ontology_term=GO:0003697,GO:0008237,GO:0008270;gbkey=CDS;go_function=single-stranded DNA binding|0003697||IEA,metallopeptidase activity|0008237||IEA,zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105765.1;locus_tag=AD853_RS14190;product=ArdC family protein;protein_id=WP_038825228.1;transl_table=11 NZ_CPUY01000015.1 RefSeq gene 71763 72668 . + . ID=gene-AD853_RS14195;Name=AD853_RS14195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS14195;old_locus_tag=ERS008462_02873 NZ_CPUY01000015.1 Protein Homology CDS 71763 72668 . + 0 ID=cds-WP_038825226.1;Parent=gene-AD853_RS14195;Dbxref=GenBank:WP_038825226.1;Name=WP_038825226.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105764.1;locus_tag=AD853_RS14195;product=DUF1281 domain-containing protein;protein_id=WP_038825226.1;transl_table=11 NZ_CPUY01000015.1 RefSeq gene 72682 73329 . - . ID=gene-AD853_RS14200;Name=AD853_RS14200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS14200;old_locus_tag=ERS008462_02874 NZ_CPUY01000015.1 Protein Homology CDS 72682 73329 . - 0 ID=cds-WP_012105763.1;Parent=gene-AD853_RS14200;Dbxref=GenBank:WP_012105763.1;Name=WP_012105763.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105763.1;locus_tag=AD853_RS14200;product=hypothetical protein;protein_id=WP_012105763.1;transl_table=11 NZ_CPUY01000015.1 RefSeq gene 73521 74717 . + . ID=gene-AD853_RS14205;Name=AD853_RS14205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS14205;old_locus_tag=ERS008462_02875 NZ_CPUY01000015.1 Protein Homology CDS 73521 74717 . + 0 ID=cds-WP_032466057.1;Parent=gene-AD853_RS14205;Dbxref=GenBank:WP_032466057.1;Name=WP_032466057.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105762.1;locus_tag=AD853_RS14205;product=TraI domain-containing protein;protein_id=WP_032466057.1;transl_table=11 NZ_CPUY01000015.1 RefSeq gene 74759 75727 . + . ID=gene-AD853_RS14210;Name=AD853_RS14210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS14210;old_locus_tag=ERS008462_02876 NZ_CPUY01000015.1 Protein Homology CDS 74759 75727 . + 0 ID=cds-WP_038825225.1;Parent=gene-AD853_RS14210;Dbxref=GenBank:WP_038825225.1;Name=WP_038825225.1;Ontology_term=GO:0006310,GO:0009009;gbkey=CDS;go_function=site-specific recombinase activity|0009009||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105761.1;locus_tag=AD853_RS14210;product=tyrosine-type recombinase/integrase;protein_id=WP_038825225.1;transl_table=11 NZ_CPUY01000015.1 RefSeq gene 75980 76055 . - . ID=gene-AD853_RS14215;Name=AD853_RS14215;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD853_RS14215;old_locus_tag=ERS008462_02877 NZ_CPUY01000015.1 tRNAscan-SE tRNA 75980 76055 . - . ID=rna-AD853_RS14215;Parent=gene-AD853_RS14215;anticodon=(pos:complement(76020..76022));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD853_RS14215;product=tRNA-Phe NZ_CPUY01000015.1 tRNAscan-SE exon 75980 76055 . - . ID=exon-AD853_RS14215-1;Parent=rna-AD853_RS14215;anticodon=(pos:complement(76020..76022));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD853_RS14215;product=tRNA-Phe NZ_CPUY01000015.1 RefSeq gene 76724 78886 . + . ID=gene-AD853_RS14220;Name=speF;gbkey=Gene;gene=speF;gene_biotype=protein_coding;locus_tag=AD853_RS14220;old_locus_tag=ERS008462_02878 NZ_CPUY01000015.1 Protein Homology CDS 76724 78886 . + 0 ID=cds-WP_050124615.1;Parent=gene-AD853_RS14220;Dbxref=GenBank:WP_050124615.1;Name=WP_050124615.1;Ontology_term=GO:0006520,GO:0004586;gbkey=CDS;gene=speF;go_function=ornithine decarboxylase activity|0004586||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012104654.1;locus_tag=AD853_RS14220;product=ornithine decarboxylase SpeF;protein_id=WP_050124615.1;transl_table=11 NZ_CPUY01000015.1 RefSeq gene 79467 80426 . + . ID=gene-AD853_RS14225;Name=AD853_RS14225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS14225;old_locus_tag=ERS008462_02879 NZ_CPUY01000015.1 Protein Homology CDS 79467 80426 . + 0 ID=cds-WP_012104655.1;Parent=gene-AD853_RS14225;Dbxref=GenBank:WP_012104655.1;Name=WP_012104655.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012104655.1;locus_tag=AD853_RS14225;product=substrate-binding domain-containing protein;protein_id=WP_012104655.1;transl_table=11 NZ_CPUY01000015.1 RefSeq gene 80472 81971 . + . ID=gene-AD853_RS14230;Name=AD853_RS14230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS14230;old_locus_tag=ERS008462_02880 NZ_CPUY01000015.1 Protein Homology CDS 80472 81971 . + 0 ID=cds-WP_011192984.1;Parent=gene-AD853_RS14230;Dbxref=GenBank:WP_011192984.1;Name=WP_011192984.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210000.1;locus_tag=AD853_RS14230;product=sugar ABC transporter ATP-binding protein;protein_id=WP_011192984.1;transl_table=11 NZ_CPUY01000015.1 RefSeq gene 82004 82987 . + . ID=gene-AD853_RS14235;Name=AD853_RS14235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS14235;old_locus_tag=ERS008462_02881 NZ_CPUY01000015.1 Protein Homology CDS 82004 82987 . + 0 ID=cds-WP_002209999.1;Parent=gene-AD853_RS14235;Dbxref=GenBank:WP_002209999.1;Name=WP_002209999.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209999.1;locus_tag=AD853_RS14235;product=ABC transporter permease;protein_id=WP_002209999.1;transl_table=11 NZ_CPUY01000015.1 RefSeq gene 83088 85121 . - . ID=gene-AD853_RS14240;Name=AD853_RS14240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS14240;old_locus_tag=ERS008462_02882 NZ_CPUY01000015.1 Protein Homology CDS 83088 85121 . - 0 ID=cds-WP_038824866.1;Parent=gene-AD853_RS14240;Dbxref=GenBank:WP_038824866.1;Name=WP_038824866.1;Ontology_term=GO:0015891,GO:0055085,GO:0015267,GO:0046872,GO:0009279,GO:0016020;gbkey=CDS;go_component=cell outer membrane|0009279||IEA,membrane|0016020||IEA;go_function=channel activity|0015267||IEA,metal ion binding|0046872||IEA;go_process=siderophore transport|0015891||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209998.1;locus_tag=AD853_RS14240;product=TonB-dependent siderophore receptor;protein_id=WP_038824866.1;transl_table=11 NZ_CPUY01000015.1 RefSeq gene 85225 86325 . - . ID=gene-AD853_RS14245;Name=AD853_RS14245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS14245;old_locus_tag=ERS008462_02883 NZ_CPUY01000015.1 Protein Homology CDS 85225 86325 . - 0 ID=cds-WP_050124616.1;Parent=gene-AD853_RS14245;Dbxref=GenBank:WP_050124616.1;Name=WP_050124616.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209997.1;locus_tag=AD853_RS14245;product=ABC transporter substrate-binding protein;protein_id=WP_050124616.1;transl_table=11 NZ_CPUY01000015.1 RefSeq gene 86589 87665 . - . ID=gene-AD853_RS14250;Name=mltC;gbkey=Gene;gene=mltC;gene_biotype=protein_coding;locus_tag=AD853_RS14250;old_locus_tag=ERS008462_02884 NZ_CPUY01000015.1 Protein Homology CDS 86589 87665 . - 0 ID=cds-WP_002209995.1;Parent=gene-AD853_RS14250;Dbxref=GenBank:WP_002209995.1;Name=WP_002209995.1;Ontology_term=GO:0000270,GO:0008933,GO:0016020;gbkey=CDS;gene=mltC;go_component=membrane|0016020||IEA;go_function=peptidoglycan lytic transglycosylase activity|0008933||IEA;go_process=peptidoglycan metabolic process|0000270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005279448.1;locus_tag=AD853_RS14250;product=membrane-bound lytic murein transglycosylase MltC;protein_id=WP_002209995.1;transl_table=11 NZ_CPUY01000015.1 RefSeq gene 87848 88120 . - . ID=gene-AD853_RS14255;Name=AD853_RS14255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS14255;old_locus_tag=ERS008462_02885 NZ_CPUY01000015.1 Protein Homology CDS 87848 88120 . - 0 ID=cds-WP_002230648.1;Parent=gene-AD853_RS14255;Dbxref=GenBank:WP_002230648.1;Name=WP_002230648.1;Ontology_term=GO:0005506;gbkey=CDS;go_function=iron ion binding|0005506||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005192570.1;locus_tag=AD853_RS14255;product=oxidative damage protection protein;protein_id=WP_002230648.1;transl_table=11 NZ_CPUY01000015.1 RefSeq gene 88298 89413 . - . ID=gene-AD853_RS14260;Name=mutY;gbkey=Gene;gene=mutY;gene_biotype=protein_coding;locus_tag=AD853_RS14260;old_locus_tag=ERS008462_02886 NZ_CPUY01000015.1 Protein Homology CDS 88298 89413 . - 0 ID=cds-WP_038824867.1;Parent=gene-AD853_RS14260;Dbxref=GenBank:WP_038824867.1;Name=WP_038824867.1;Ontology_term=GO:0006281,GO:0019104;gbkey=CDS;gene=mutY;go_function=DNA N-glycosylase activity|0019104||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192982.1;locus_tag=AD853_RS14260;product=A/G-specific adenine glycosylase;protein_id=WP_038824867.1;transl_table=11 NZ_CPUY01000015.1 RefSeq gene 89826 90545 . + . ID=gene-AD853_RS14265;Name=trmB;gbkey=Gene;gene=trmB;gene_biotype=protein_coding;locus_tag=AD853_RS14265;old_locus_tag=ERS008462_02887 NZ_CPUY01000015.1 Protein Homology CDS 89826 90545 . + 0 ID=cds-WP_011192981.1;Parent=gene-AD853_RS14265;Dbxref=GenBank:WP_011192981.1;Name=WP_011192981.1;Ontology_term=GO:0006400,GO:0008176;gbkey=CDS;gene=trmB;go_function=tRNA (guanine(46)-N7)-methyltransferase activity|0008176||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004706850.1;locus_tag=AD853_RS14265;product=tRNA (guanosine(46)-N7)-methyltransferase TrmB;protein_id=WP_011192981.1;transl_table=11 NZ_CPUY01000015.1 RefSeq gene 90545 90871 . + . ID=gene-AD853_RS14270;Name=AD853_RS14270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS14270;old_locus_tag=ERS008462_02888 NZ_CPUY01000015.1 Protein Homology CDS 90545 90871 . + 0 ID=cds-WP_002209990.1;Parent=gene-AD853_RS14270;Dbxref=GenBank:WP_002209990.1;Name=WP_002209990.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417434.4;locus_tag=AD853_RS14270;product=YggL family protein;protein_id=WP_002209990.1;transl_table=11 NZ_CPUY01000015.1 RefSeq gene 90982 91908 . + . ID=gene-AD853_RS14275;Name=glsB;gbkey=Gene;gene=glsB;gene_biotype=protein_coding;locus_tag=AD853_RS14275;old_locus_tag=ERS008462_02889 NZ_CPUY01000015.1 Protein Homology CDS 90982 91908 . + 0 ID=cds-WP_011192980.1;Parent=gene-AD853_RS14275;Dbxref=GenBank:WP_011192980.1;Name=WP_011192980.1;Ontology_term=GO:0006541,GO:0004359;gbkey=CDS;gene=glsB;go_function=glutaminase activity|0004359||IEA;go_process=glutamine metabolic process|0006541||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012104660.1;locus_tag=AD853_RS14275;product=glutaminase B;protein_id=WP_011192980.1;transl_table=11 NZ_CPUY01000015.1 RefSeq gene 92020 92754 . + . ID=gene-AD853_RS14280;Name=AD853_RS14280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS14280;old_locus_tag=ERS008462_02890 NZ_CPUY01000015.1 Protein Homology CDS 92020 92754 . + 0 ID=cds-WP_012303643.1;Parent=gene-AD853_RS14280;Dbxref=GenBank:WP_012303643.1;Name=WP_012303643.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012303643.1;locus_tag=AD853_RS14280;product=YggN family protein;protein_id=WP_012303643.1;transl_table=11 NZ_CPUY01000015.1 RefSeq pseudogene 93258 102591 . + . ID=gene-AD853_RS14285;Name=AD853_RS14285;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD853_RS14285;old_locus_tag=ERS008462_02891;pseudo=true NZ_CPUY01000015.1 Protein Homology CDS 93258 102591 . + 0 ID=cds-AD853_RS14285;Parent=gene-AD853_RS14285;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011906173.1;locus_tag=AD853_RS14285;product=C80 family cysteine peptidase;pseudo=true;transl_table=11 NZ_CPUY01000015.1 RefSeq gene 102781 103911 . - . ID=gene-AD853_RS14290;Name=hemW;gbkey=Gene;gene=hemW;gene_biotype=protein_coding;locus_tag=AD853_RS14290;old_locus_tag=ERS008462_02893 NZ_CPUY01000015.1 Protein Homology CDS 102781 103911 . - 0 ID=cds-WP_002209987.1;Parent=gene-AD853_RS14290;Dbxref=GenBank:WP_002209987.1;Name=WP_002209987.1;Ontology_term=GO:0006779,GO:0051539,GO:0051989,GO:0005737;gbkey=CDS;gene=hemW;go_component=cytoplasm|0005737||IEA;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,coproporphyrinogen dehydrogenase activity|0051989||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209987.1;locus_tag=AD853_RS14290;product=radical SAM family heme chaperone HemW;protein_id=WP_002209987.1;transl_table=11 NZ_CPUY01000015.1 RefSeq gene 103904 104497 . - . ID=gene-AD853_RS14295;Name=AD853_RS14295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS14295;old_locus_tag=ERS008462_02894 NZ_CPUY01000015.1 Protein Homology CDS 103904 104497 . - 0 ID=cds-WP_011192977.1;Parent=gene-AD853_RS14295;Dbxref=GenBank:WP_011192977.1;Name=WP_011192977.1;Ontology_term=GO:0009143,GO:0047429;gbkey=CDS;go_function=nucleoside triphosphate diphosphatase activity|0047429||IEA;go_process=nucleoside triphosphate catabolic process|0009143||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011095132.1;locus_tag=AD853_RS14295;product=XTP/dITP diphosphatase;protein_id=WP_011192977.1;transl_table=11 NZ_CPUY01000015.1 RefSeq gene 104597 104887 . - . ID=gene-AD853_RS14300;Name=yggU;gbkey=Gene;gene=yggU;gene_biotype=protein_coding;locus_tag=AD853_RS14300;old_locus_tag=ERS008462_02895 NZ_CPUY01000015.1 Protein Homology CDS 104597 104887 . - 0 ID=cds-WP_011192976.1;Parent=gene-AD853_RS14300;Dbxref=GenBank:WP_011192976.1;Name=WP_011192976.1;gbkey=CDS;gene=yggU;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002215612.1;locus_tag=AD853_RS14300;product=DUF167 family protein YggU;protein_id=WP_011192976.1;transl_table=11 NZ_CPUY01000015.1 RefSeq gene 104884 105438 . - . ID=gene-AD853_RS14305;Name=AD853_RS14305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS14305;old_locus_tag=ERS008462_02896 NZ_CPUY01000015.1 Protein Homology CDS 104884 105438 . - 0 ID=cds-WP_011192975.1;Parent=gene-AD853_RS14305;Dbxref=GenBank:WP_011192975.1;Name=WP_011192975.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012413935.1;locus_tag=AD853_RS14305;product=YggT family protein;protein_id=WP_011192975.1;transl_table=11 NZ_CPUY01000015.1 RefSeq gene 105726 106547 . - . ID=gene-AD853_RS14310;Name=proC;gbkey=Gene;gene=proC;gene_biotype=protein_coding;locus_tag=AD853_RS14310;old_locus_tag=ERS008462_02897 NZ_CPUY01000015.1 Protein Homology CDS 105726 106547 . - 0 ID=cds-WP_012303648.1;Parent=gene-AD853_RS14310;Dbxref=GenBank:WP_012303648.1;Name=WP_012303648.1;Ontology_term=GO:0055129,GO:0004735;gbkey=CDS;gene=proC;go_function=pyrroline-5-carboxylate reductase activity|0004735||IEA;go_process=L-proline biosynthetic process|0055129||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209983.1;locus_tag=AD853_RS14310;product=pyrroline-5-carboxylate reductase;protein_id=WP_012303648.1;transl_table=11 NZ_CPUY01000015.1 RefSeq gene 106680 107378 . - . ID=gene-AD853_RS14315;Name=AD853_RS14315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS14315;old_locus_tag=ERS008462_02898 NZ_CPUY01000015.1 Protein Homology CDS 106680 107378 . - 0 ID=cds-WP_011192973.1;Parent=gene-AD853_RS14315;Dbxref=GenBank:WP_011192973.1;Name=WP_011192973.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002215609.1;locus_tag=AD853_RS14315;product=YggS family pyridoxal phosphate-dependent enzyme;protein_id=WP_011192973.1;transl_table=11 NZ_CPUY01000015.1 RefSeq gene 107398 108522 . + . ID=gene-AD853_RS14320;Name=AD853_RS14320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS14320;old_locus_tag=ERS008462_02899 NZ_CPUY01000015.1 Protein Homology CDS 107398 108522 . + 0 ID=cds-WP_024063124.1;Parent=gene-AD853_RS14320;Dbxref=GenBank:WP_024063124.1;Name=WP_024063124.1;Ontology_term=GO:0043107,GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;go_process=type IV pilus-dependent motility|0043107||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209981.1;locus_tag=AD853_RS14320;product=type IV pilus twitching motility protein PilT;protein_id=WP_024063124.1;transl_table=11 NZ_CPUY01000015.1 RefSeq gene 108631 109746 . - . ID=gene-AD853_RS14325;Name=aguA;gbkey=Gene;gene=aguA;gene_biotype=protein_coding;locus_tag=AD853_RS14325;old_locus_tag=ERS008462_02900 NZ_CPUY01000015.1 Protein Homology CDS 108631 109746 . - 0 ID=cds-WP_002209980.1;Parent=gene-AD853_RS14325;Dbxref=GenBank:WP_002209980.1;Name=WP_002209980.1;Ontology_term=GO:0009446,GO:0047632,GO:0005737;gbkey=CDS;gene=aguA;go_component=cytoplasm|0005737||IEA;go_function=agmatine deiminase activity|0047632||IEA;go_process=putrescine biosynthetic process|0009446||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012413934.1;locus_tag=AD853_RS14325;product=agmatine deiminase;protein_id=WP_002209980.1;transl_table=11 NZ_CPUY01000015.1 RefSeq gene 109750 110634 . - . ID=gene-AD853_RS14330;Name=aguB;gbkey=Gene;gene=aguB;gene_biotype=protein_coding;locus_tag=AD853_RS14330;old_locus_tag=ERS008462_02901 NZ_CPUY01000015.1 Protein Homology CDS 109750 110634 . - 0 ID=cds-WP_002209979.1;Parent=gene-AD853_RS14330;Dbxref=GenBank:WP_002209979.1;Name=WP_002209979.1;Ontology_term=GO:0009446,GO:0050126,GO:0005737;gbkey=CDS;gene=aguB;go_component=cytoplasm|0005737||IEA;go_function=N-carbamoylputrescine amidase activity|0050126||IEA;go_process=putrescine biosynthetic process|0009446||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005192514.1;locus_tag=AD853_RS14330;product=N-carbamoylputrescine amidase;protein_id=WP_002209979.1;transl_table=11 NZ_CPUY01000015.1 RefSeq gene 110814 111236 . - . ID=gene-AD853_RS14335;Name=ruvX;gbkey=Gene;gene=ruvX;gene_biotype=protein_coding;locus_tag=AD853_RS14335;old_locus_tag=ERS008462_02902 NZ_CPUY01000015.1 Protein Homology CDS 110814 111236 . - 0 ID=cds-WP_002209978.1;Parent=gene-AD853_RS14335;Dbxref=GenBank:WP_002209978.1;Name=WP_002209978.1;Ontology_term=GO:0006364;gbkey=CDS;gene=ruvX;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209978.1;locus_tag=AD853_RS14335;product=Holliday junction resolvase RuvX;protein_id=WP_002209978.1;transl_table=11 NZ_CPUY01000015.1 RefSeq gene 111236 111799 . - . ID=gene-AD853_RS14340;Name=AD853_RS14340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS14340;old_locus_tag=ERS008462_02903 NZ_CPUY01000015.1 Protein Homology CDS 111236 111799 . - 0 ID=cds-WP_011192971.1;Parent=gene-AD853_RS14340;Dbxref=GenBank:WP_011192971.1;Name=WP_011192971.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015841840.1;locus_tag=AD853_RS14340;product=YqgE/AlgH family protein;protein_id=WP_011192971.1;transl_table=11 NZ_CPUY01000015.1 RefSeq gene 111915 112874 . - . ID=gene-AD853_RS14345;Name=gshB;gbkey=Gene;gene=gshB;gene_biotype=protein_coding;locus_tag=AD853_RS14345;old_locus_tag=ERS008462_02904 NZ_CPUY01000015.1 Protein Homology CDS 111915 112874 . - 0 ID=cds-WP_012303650.1;Parent=gene-AD853_RS14345;Dbxref=GenBank:WP_012303650.1;Name=WP_012303650.1;Ontology_term=GO:0006750,GO:0004363,GO:0005524,GO:0046872;gbkey=CDS;gene=gshB;go_function=glutathione synthase activity|0004363||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=glutathione biosynthetic process|0006750||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209976.1;locus_tag=AD853_RS14345;product=glutathione synthase;protein_id=WP_012303650.1;transl_table=11 NZ_CPUY01000015.1 RefSeq gene 112900 113631 . - . ID=gene-AD853_RS14350;Name=rsmE;gbkey=Gene;gene=rsmE;gene_biotype=protein_coding;locus_tag=AD853_RS14350;old_locus_tag=ERS008462_02905 NZ_CPUY01000015.1 Protein Homology CDS 112900 113631 . - 0 ID=cds-WP_002209975.1;Parent=gene-AD853_RS14350;Dbxref=GenBank:WP_002209975.1;Name=WP_002209975.1;Ontology_term=GO:0006364,GO:0008168;gbkey=CDS;gene=rsmE;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311849.2;locus_tag=AD853_RS14350;product=16S rRNA (uracil(1498)-N(3))-methyltransferase;protein_id=WP_002209975.1;transl_table=11 NZ_CPUY01000015.1 RefSeq gene 113740 113958 . - . ID=gene-AD853_RS14355;Name=AD853_RS14355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS14355 NZ_CPUY01000015.1 Protein Homology CDS 113740 113958 . - 0 ID=cds-WP_038824142.1;Parent=gene-AD853_RS14355;Dbxref=GenBank:WP_038824142.1;Name=WP_038824142.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209974.1;locus_tag=AD853_RS14355;product=hypothetical protein;protein_id=WP_038824142.1;transl_table=11 NZ_CPUY01000015.1 RefSeq gene 113937 114644 . - . ID=gene-AD853_RS14360;Name=endA;gbkey=Gene;gene=endA;gene_biotype=protein_coding;locus_tag=AD853_RS14360;old_locus_tag=ERS008462_02906 NZ_CPUY01000015.1 Protein Homology CDS 113937 114644 . - 0 ID=cds-WP_002209973.1;Parent=gene-AD853_RS14360;Dbxref=GenBank:WP_002209973.1;Name=WP_002209973.1;Ontology_term=GO:0004518;gbkey=CDS;gene=endA;go_function=nuclease activity|0004518||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209973.1;locus_tag=AD853_RS14360;product=deoxyribonuclease I;protein_id=WP_002209973.1;transl_table=11 NZ_CPUY01000015.1 RefSeq gene 114742 115254 . - . ID=gene-AD853_RS14365;Name=AD853_RS14365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS14365;old_locus_tag=ERS008462_02907 NZ_CPUY01000015.1 Protein Homology CDS 114742 115254 . - 0 ID=cds-WP_012104670.1;Parent=gene-AD853_RS14365;Dbxref=GenBank:WP_012104670.1;Name=WP_012104670.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002228059.1;locus_tag=AD853_RS14365;product=SprT family zinc-dependent metalloprotease;protein_id=WP_012104670.1;transl_table=11 NZ_CPUY01000015.1 RefSeq gene 115463 116617 . - . ID=gene-AD853_RS14370;Name=metK;gbkey=Gene;gene=metK;gene_biotype=protein_coding;locus_tag=AD853_RS14370;old_locus_tag=ERS008462_02908 NZ_CPUY01000015.1 Protein Homology CDS 115463 116617 . - 0 ID=cds-WP_002209971.1;Parent=gene-AD853_RS14370;Dbxref=GenBank:WP_002209971.1;Name=WP_002209971.1;Ontology_term=GO:0006556,GO:0004478,GO:0005524;gbkey=CDS;gene=metK;go_function=methionine adenosyltransferase activity|0004478||IEA,ATP binding|0005524||IEA;go_process=S-adenosylmethionine biosynthetic process|0006556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123306.1;locus_tag=AD853_RS14370;product=methionine adenosyltransferase;protein_id=WP_002209971.1;transl_table=11 NZ_CPUY01000015.1 RefSeq gene 117453 117596 . + . ID=gene-AD853_RS22750;Name=AD853_RS22750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS22750;old_locus_tag=ERS008462_02909 NZ_CPUY01000015.1 Protein Homology CDS 117453 117596 . + 0 ID=cds-WP_012303653.1;Parent=gene-AD853_RS22750;Dbxref=GenBank:WP_012303653.1;Name=WP_012303653.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF048138.1;locus_tag=AD853_RS22750;product=hypothetical protein;protein_id=WP_012303653.1;transl_table=11 NZ_CPUY01000015.1 RefSeq gene 117842 119821 . + . ID=gene-AD853_RS14375;Name=speA;gbkey=Gene;gene=speA;gene_biotype=protein_coding;locus_tag=AD853_RS14375;old_locus_tag=ERS008462_02910 NZ_CPUY01000015.1 Protein Homology CDS 117842 119821 . + 0 ID=cds-WP_002209969.1;Parent=gene-AD853_RS14375;Dbxref=GenBank:WP_002209969.1;Name=WP_002209969.1;Ontology_term=GO:0006527,GO:0008792;gbkey=CDS;gene=speA;go_function=arginine decarboxylase activity|0008792||IEA;go_process=L-arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019082398.1;locus_tag=AD853_RS14375;product=biosynthetic arginine decarboxylase;protein_id=WP_002209969.1;transl_table=11 ##sequence-region NZ_CPUY01000016.1 1 117804 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=633 NZ_CPUY01000016.1 RefSeq region 1 117804 . + . ID=NZ_CPUY01000016.1:1..117804;Dbxref=taxon:633;collection-date=1900/2008;country=South Africa;gbkey=Src;genome=genomic;isolation-source=not known;mol_type=genomic DNA;nat-host=pig;serovar=O:3;strain=IP32544 NZ_CPUY01000016.1 RefSeq gene 160 1251 . - . ID=gene-AD853_RS14380;Name=ychF;gbkey=Gene;gene=ychF;gene_biotype=protein_coding;locus_tag=AD853_RS14380;old_locus_tag=ERS008462_02913 NZ_CPUY01000016.1 Protein Homology CDS 160 1251 . - 0 ID=cds-WP_002211245.1;Parent=gene-AD853_RS14380;Dbxref=GenBank:WP_002211245.1;Name=WP_002211245.1;Ontology_term=GO:0005524,GO:0005525,GO:0016887;gbkey=CDS;gene=ychF;go_function=ATP binding|0005524||IEA,GTP binding|0005525||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001538644.1;locus_tag=AD853_RS14380;product=redox-regulated ATPase YchF;protein_id=WP_002211245.1;transl_table=11 NZ_CPUY01000016.1 RefSeq gene 1416 2006 . - . ID=gene-AD853_RS14385;Name=pth;gbkey=Gene;gene=pth;gene_biotype=protein_coding;locus_tag=AD853_RS14385;old_locus_tag=ERS008462_02914 NZ_CPUY01000016.1 Protein Homology CDS 1416 2006 . - 0 ID=cds-WP_012105144.1;Parent=gene-AD853_RS14385;Dbxref=GenBank:WP_012105144.1;Name=WP_012105144.1;Ontology_term=GO:0004045;gbkey=CDS;gene=pth;go_function=peptidyl-tRNA hydrolase activity|0004045||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016256499.1;locus_tag=AD853_RS14385;product=aminoacyl-tRNA hydrolase;protein_id=WP_012105144.1;transl_table=11 NZ_CPUY01000016.1 RefSeq gene 2368 2640 . + . ID=gene-AD853_RS14390;Name=ychH;gbkey=Gene;gene=ychH;gene_biotype=protein_coding;locus_tag=AD853_RS14390;old_locus_tag=ERS008462_02915 NZ_CPUY01000016.1 Protein Homology CDS 2368 2640 . + 0 ID=cds-WP_002211242.1;Parent=gene-AD853_RS14390;Dbxref=GenBank:WP_002211242.1;Name=WP_002211242.1;gbkey=CDS;gene=ychH;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227540.1;locus_tag=AD853_RS14390;product=stress-induced protein YchH;protein_id=WP_002211242.1;transl_table=11 NZ_CPUY01000016.1 RefSeq gene 2842 3789 . - . ID=gene-AD853_RS14400;Name=prs;gbkey=Gene;gene=prs;gene_biotype=protein_coding;locus_tag=AD853_RS14400;old_locus_tag=ERS008462_02916 NZ_CPUY01000016.1 Protein Homology CDS 2842 3789 . - 0 ID=cds-WP_038824910.1;Parent=gene-AD853_RS14400;Dbxref=GenBank:WP_038824910.1;Name=WP_038824910.1;gbkey=CDS;gene=prs;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002910407.1;locus_tag=AD853_RS14400;product=ribose-phosphate diphosphokinase;protein_id=WP_038824910.1;transl_table=11 NZ_CPUY01000016.1 RefSeq gene 4130 5029 . - . ID=gene-AD853_RS14410;Name=ispE;gbkey=Gene;gene=ispE;gene_biotype=protein_coding;locus_tag=AD853_RS14410;old_locus_tag=ERS008462_02917 NZ_CPUY01000016.1 Protein Homology CDS 4130 5029 . - 0 ID=cds-WP_002211239.1;Parent=gene-AD853_RS14410;Dbxref=GenBank:WP_002211239.1;Name=WP_002211239.1;Ontology_term=GO:0016114,GO:0050515;gbkey=CDS;gene=ispE;go_function=4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity|0050515||IEA;go_process=terpenoid biosynthetic process|0016114||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211239.1;locus_tag=AD853_RS14410;product=4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase;protein_id=WP_002211239.1;transl_table=11 NZ_CPUY01000016.1 RefSeq gene 5031 5654 . - . ID=gene-AD853_RS14415;Name=lolB;gbkey=Gene;gene=lolB;gene_biotype=protein_coding;locus_tag=AD853_RS14415;old_locus_tag=ERS008462_02918 NZ_CPUY01000016.1 Protein Homology CDS 5031 5654 . - 0 ID=cds-WP_038824908.1;Parent=gene-AD853_RS14415;Dbxref=GenBank:WP_038824908.1;Name=WP_038824908.1;Ontology_term=GO:0015031,GO:0009279;gbkey=CDS;gene=lolB;go_component=cell outer membrane|0009279||IEA;go_process=protein transport|0015031||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016583171.1;locus_tag=AD853_RS14415;product=lipoprotein insertase outer membrane protein LolB;protein_id=WP_038824908.1;transl_table=11 NZ_CPUY01000016.1 RefSeq gene 5960 7222 . + . ID=gene-AD853_RS14420;Name=hemA;gbkey=Gene;gene=hemA;gene_biotype=protein_coding;locus_tag=AD853_RS14420;old_locus_tag=ERS008462_02919 NZ_CPUY01000016.1 Protein Homology CDS 5960 7222 . + 0 ID=cds-WP_002211237.1;Parent=gene-AD853_RS14420;Dbxref=GenBank:WP_002211237.1;Name=WP_002211237.1;Ontology_term=GO:0008883,GO:0050661;gbkey=CDS;gene=hemA;go_function=glutamyl-tRNA reductase activity|0008883||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012006413.1;locus_tag=AD853_RS14420;product=glutamyl-tRNA reductase;protein_id=WP_002211237.1;transl_table=11 NZ_CPUY01000016.1 RefSeq gene 7255 8337 . + . ID=gene-AD853_RS14425;Name=prfA;gbkey=Gene;gene=prfA;gene_biotype=protein_coding;locus_tag=AD853_RS14425;old_locus_tag=ERS008462_02920 NZ_CPUY01000016.1 Protein Homology CDS 7255 8337 . + 0 ID=cds-WP_002211236.1;Parent=gene-AD853_RS14425;Dbxref=GenBank:WP_002211236.1;Name=WP_002211236.1;Ontology_term=GO:0006415,GO:0003747;gbkey=CDS;gene=prfA;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309743.1;locus_tag=AD853_RS14425;product=peptide chain release factor 1;protein_id=WP_002211236.1;transl_table=11 NZ_CPUY01000016.1 RefSeq gene 8337 9167 . + . ID=gene-AD853_RS14430;Name=prmC;gbkey=Gene;gene=prmC;gene_biotype=protein_coding;locus_tag=AD853_RS14430;old_locus_tag=ERS008462_02921 NZ_CPUY01000016.1 Protein Homology CDS 8337 9167 . + 0 ID=cds-WP_011192399.1;Parent=gene-AD853_RS14430;Dbxref=GenBank:WP_011192399.1;Name=WP_011192399.1;Ontology_term=GO:0006412,GO:0018364,GO:0008757;gbkey=CDS;gene=prmC;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=translation|0006412||IEA,peptidyl-glutamine methylation|0018364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211235.1;locus_tag=AD853_RS14430;product=peptide chain release factor N(5)-glutamine methyltransferase;protein_id=WP_011192399.1;transl_table=11 NZ_CPUY01000016.1 RefSeq gene 9231 9632 . + . ID=gene-AD853_RS14435;Name=AD853_RS14435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS14435;old_locus_tag=ERS008462_02922 NZ_CPUY01000016.1 Protein Homology CDS 9231 9632 . + 0 ID=cds-WP_038824907.1;Parent=gene-AD853_RS14435;Dbxref=GenBank:WP_038824907.1;Name=WP_038824907.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005169111.1;locus_tag=AD853_RS14435;product=SirB2 family protein;protein_id=WP_038824907.1;transl_table=11 NZ_CPUY01000016.1 RefSeq gene 9629 10438 . + . ID=gene-AD853_RS14440;Name=sirB1;gbkey=Gene;gene=sirB1;gene_biotype=protein_coding;locus_tag=AD853_RS14440;old_locus_tag=ERS008462_02923 NZ_CPUY01000016.1 Protein Homology CDS 9629 10438 . + 0 ID=cds-WP_002211233.1;Parent=gene-AD853_RS14440;Dbxref=GenBank:WP_002211233.1;Name=WP_002211233.1;gbkey=CDS;gene=sirB1;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016256500.1;locus_tag=AD853_RS14440;product=invasion regulator SirB1;protein_id=WP_002211233.1;transl_table=11 NZ_CPUY01000016.1 RefSeq gene 10534 11388 . + . ID=gene-AD853_RS14445;Name=kdsA;gbkey=Gene;gene=kdsA;gene_biotype=protein_coding;locus_tag=AD853_RS14445;old_locus_tag=ERS008462_02924 NZ_CPUY01000016.1 Protein Homology CDS 10534 11388 . + 0 ID=cds-WP_002211232.1;Parent=gene-AD853_RS14445;Dbxref=GenBank:WP_002211232.1;Name=WP_002211232.1;Ontology_term=GO:0008676;gbkey=CDS;gene=kdsA;go_function=3-deoxy-8-phosphooctulonate synthase activity|0008676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227529.1;locus_tag=AD853_RS14445;product=3-deoxy-8-phosphooctulonate synthase;protein_id=WP_002211232.1;transl_table=11 NZ_CPUY01000016.1 RefSeq gene 11549 13246 . - . ID=gene-AD853_RS14450;Name=dauA;gbkey=Gene;gene=dauA;gene_biotype=protein_coding;locus_tag=AD853_RS14450;old_locus_tag=ERS008462_02925 NZ_CPUY01000016.1 Protein Homology CDS 11549 13246 . - 0 ID=cds-WP_012105141.1;Parent=gene-AD853_RS14450;Dbxref=GenBank:WP_012105141.1;Name=WP_012105141.1;gbkey=CDS;gene=dauA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013649767.1;locus_tag=AD853_RS14450;product=C4-dicarboxylic acid transporter DauA;protein_id=WP_012105141.1;transl_table=11 NZ_CPUY01000016.1 RefSeq gene 14094 14183 . - . ID=gene-AD853_RS14460;Name=AD853_RS14460;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD853_RS14460;old_locus_tag=ERS008462_02926 NZ_CPUY01000016.1 tRNAscan-SE tRNA 14094 14183 . - . ID=rna-AD853_RS14460;Parent=gene-AD853_RS14460;anticodon=(pos:complement(14147..14149));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD853_RS14460;product=tRNA-Ser NZ_CPUY01000016.1 tRNAscan-SE exon 14094 14183 . - . ID=exon-AD853_RS14460-1;Parent=rna-AD853_RS14460;anticodon=(pos:complement(14147..14149));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD853_RS14460;product=tRNA-Ser NZ_CPUY01000016.1 RefSeq gene 14325 15200 . - . ID=gene-AD853_RS14465;Name=AD853_RS14465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS14465;old_locus_tag=ERS008462_02927 NZ_CPUY01000016.1 Protein Homology CDS 14325 15200 . - 0 ID=cds-WP_002211229.1;Parent=gene-AD853_RS14465;Dbxref=GenBank:WP_002211229.1;Name=WP_002211229.1;Ontology_term=GO:0006629,GO:0008081;gbkey=CDS;go_function=phosphoric diester hydrolase activity|0008081||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211229.1;locus_tag=AD853_RS14465;product=glycerophosphodiester phosphodiesterase family protein;protein_id=WP_002211229.1;transl_table=11 NZ_CPUY01000016.1 RefSeq gene 15501 16583 . - . ID=gene-AD853_RS14470;Name=AD853_RS14470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS14470;old_locus_tag=ERS008462_02928 NZ_CPUY01000016.1 Protein Homology CDS 15501 16583 . - 0 ID=cds-WP_002211228.1;Parent=gene-AD853_RS14470;Dbxref=GenBank:WP_002211228.1;Name=WP_002211228.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304117.1;locus_tag=AD853_RS14470;product=ABC transporter substrate-binding protein;protein_id=WP_002211228.1;transl_table=11 NZ_CPUY01000016.1 RefSeq gene 16603 17439 . - . ID=gene-AD853_RS14475;Name=AD853_RS14475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS14475;old_locus_tag=ERS008462_02929 NZ_CPUY01000016.1 Protein Homology CDS 16603 17439 . - 0 ID=cds-WP_002211227.1;Parent=gene-AD853_RS14475;Dbxref=GenBank:WP_002211227.1;Name=WP_002211227.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211227.1;locus_tag=AD853_RS14475;product=ABC transporter permease;protein_id=WP_002211227.1;transl_table=11 NZ_CPUY01000016.1 RefSeq gene 17436 18302 . - . ID=gene-AD853_RS14480;Name=AD853_RS14480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS14480;old_locus_tag=ERS008462_02930 NZ_CPUY01000016.1 Protein Homology CDS 17436 18302 . - 0 ID=cds-WP_038825239.1;Parent=gene-AD853_RS14480;Dbxref=GenBank:WP_038825239.1;Name=WP_038825239.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304116.1;locus_tag=AD853_RS14480;product=ABC transporter permease;protein_id=WP_038825239.1;transl_table=11 NZ_CPUY01000016.1 RefSeq gene 18299 19366 . - . ID=gene-AD853_RS14485;Name=AD853_RS14485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS14485;old_locus_tag=ERS008462_02931 NZ_CPUY01000016.1 Protein Homology CDS 18299 19366 . - 0 ID=cds-WP_038825238.1;Parent=gene-AD853_RS14485;Dbxref=GenBank:WP_038825238.1;Name=WP_038825238.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015683639.1;locus_tag=AD853_RS14485;product=ABC transporter ATP-binding protein;protein_id=WP_038825238.1;transl_table=11 NZ_CPUY01000016.1 RefSeq gene 19580 20410 . + . ID=gene-AD853_RS14490;Name=AD853_RS14490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS14490;old_locus_tag=ERS008462_02932 NZ_CPUY01000016.1 Protein Homology CDS 19580 20410 . + 0 ID=cds-WP_038825236.1;Parent=gene-AD853_RS14490;Dbxref=GenBank:WP_038825236.1;Name=WP_038825236.1;Ontology_term=GO:0006629,GO:0008081,GO:0046872;gbkey=CDS;go_function=phosphoric diester hydrolase activity|0008081||IEA,metal ion binding|0046872||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211223.1;locus_tag=AD853_RS14490;product=glycerophosphodiester phosphodiesterase;protein_id=WP_038825236.1;transl_table=11 NZ_CPUY01000016.1 RefSeq gene 20424 21536 . + . ID=gene-AD853_RS14495;Name=AD853_RS14495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS14495;old_locus_tag=ERS008462_02933 NZ_CPUY01000016.1 Protein Homology CDS 20424 21536 . + 0 ID=cds-WP_002211222.1;Parent=gene-AD853_RS14495;Dbxref=GenBank:WP_002211222.1;Name=WP_002211222.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211222.1;locus_tag=AD853_RS14495;product=ROK family transcriptional regulator;protein_id=WP_002211222.1;transl_table=11 NZ_CPUY01000016.1 RefSeq gene 21793 21882 . - . ID=gene-AD853_RS14500;Name=AD853_RS14500;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD853_RS14500;old_locus_tag=ERS008462_02934 NZ_CPUY01000016.1 tRNAscan-SE tRNA 21793 21882 . - . ID=rna-AD853_RS14500;Parent=gene-AD853_RS14500;anticodon=(pos:complement(21846..21848));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD853_RS14500;product=tRNA-Ser NZ_CPUY01000016.1 tRNAscan-SE exon 21793 21882 . - . ID=exon-AD853_RS14500-1;Parent=rna-AD853_RS14500;anticodon=(pos:complement(21846..21848));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD853_RS14500;product=tRNA-Ser NZ_CPUY01000016.1 RefSeq gene 22171 22908 . + . ID=gene-AD853_RS14505;Name=AD853_RS14505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS14505;old_locus_tag=ERS008462_02935 NZ_CPUY01000016.1 Protein Homology CDS 22171 22908 . + 0 ID=cds-WP_002211221.1;Parent=gene-AD853_RS14505;Dbxref=GenBank:WP_002211221.1;Name=WP_002211221.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012006358.1;locus_tag=AD853_RS14505;product=phosphatase;protein_id=WP_002211221.1;transl_table=11 NZ_CPUY01000016.1 RefSeq gene 22945 23505 . + . ID=gene-AD853_RS14510;Name=AD853_RS14510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS14510;old_locus_tag=ERS008462_02936 NZ_CPUY01000016.1 Protein Homology CDS 22945 23505 . + 0 ID=cds-WP_002211220.1;Parent=gene-AD853_RS14510;Dbxref=GenBank:WP_002211220.1;Name=WP_002211220.1;Ontology_term=GO:0006457;gbkey=CDS;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211220.1;locus_tag=AD853_RS14510;product=TorD/DmsD family molecular chaperone;protein_id=WP_002211220.1;transl_table=11 NZ_CPUY01000016.1 RefSeq gene 23802 24365 . - . ID=gene-AD853_RS14515;Name=AD853_RS14515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS14515;old_locus_tag=ERS008462_02937 NZ_CPUY01000016.1 Protein Homology CDS 23802 24365 . - 0 ID=cds-WP_002211218.1;Parent=gene-AD853_RS14515;Dbxref=GenBank:WP_002211218.1;Name=WP_002211218.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012229689.1;locus_tag=AD853_RS14515;product=lipoprotein;protein_id=WP_002211218.1;transl_table=11 NZ_CPUY01000016.1 RefSeq gene 24764 25969 . - . ID=gene-AD853_RS14520;Name=mdtH;gbkey=Gene;gene=mdtH;gene_biotype=protein_coding;locus_tag=AD853_RS14520;old_locus_tag=ERS008462_02938 NZ_CPUY01000016.1 Protein Homology CDS 24764 25969 . - 0 ID=cds-WP_038825341.1;Parent=gene-AD853_RS14520;Dbxref=GenBank:WP_038825341.1;Name=WP_038825341.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=mdtH;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211217.1;locus_tag=AD853_RS14520;product=multidrug efflux MFS transporter MdtH;protein_id=WP_038825341.1;transl_table=11 NZ_CPUY01000016.1 RefSeq gene 26263 26847 . + . ID=gene-AD853_RS14525;Name=rimJ;gbkey=Gene;gene=rimJ;gene_biotype=protein_coding;locus_tag=AD853_RS14525;old_locus_tag=ERS008462_02939 NZ_CPUY01000016.1 Protein Homology CDS 26263 26847 . + 0 ID=cds-WP_002211216.1;Parent=gene-AD853_RS14525;Dbxref=GenBank:WP_002211216.1;Name=WP_002211216.1;Ontology_term=GO:0008080;gbkey=CDS;gene=rimJ;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211216.1;locus_tag=AD853_RS14525;product=ribosomal protein S5-alanine N-acetyltransferase;protein_id=WP_002211216.1;transl_table=11 NZ_CPUY01000016.1 RefSeq gene 26855 27556 . + . ID=gene-AD853_RS14530;Name=AD853_RS14530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS14530;old_locus_tag=ERS008462_02940 NZ_CPUY01000016.1 Protein Homology CDS 26855 27556 . + 0 ID=cds-WP_011192403.1;Parent=gene-AD853_RS14530;Dbxref=GenBank:WP_011192403.1;Name=WP_011192403.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014608990.1;locus_tag=AD853_RS14530;product=YceH family protein;protein_id=WP_011192403.1;transl_table=11 NZ_CPUY01000016.1 RefSeq gene 27567 28478 . + . ID=gene-AD853_RS14535;Name=AD853_RS14535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS14535;old_locus_tag=ERS008462_02941 NZ_CPUY01000016.1 Protein Homology CDS 27567 28478 . + 0 ID=cds-WP_002354211.1;Parent=gene-AD853_RS14535;Dbxref=GenBank:WP_002354211.1;Name=WP_002354211.1;Ontology_term=GO:0000166,GO:0003824;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192404.1;locus_tag=AD853_RS14535;product=Gfo/Idh/MocA family protein;protein_id=WP_002354211.1;transl_table=11 NZ_CPUY01000016.1 RefSeq gene 28745 30280 . + . ID=gene-AD853_RS14540;Name=murJ;gbkey=Gene;gene=murJ;gene_biotype=protein_coding;locus_tag=AD853_RS14540;old_locus_tag=ERS008462_02942 NZ_CPUY01000016.1 Protein Homology CDS 28745 30280 . + 0 ID=cds-WP_038825339.1;Parent=gene-AD853_RS14540;Dbxref=GenBank:WP_038825339.1;Name=WP_038825339.1;Ontology_term=GO:0009252,GO:0034204;gbkey=CDS;gene=murJ;go_process=peptidoglycan biosynthetic process|0009252||IEA,lipid translocation|0034204||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105136.1;locus_tag=AD853_RS14540;product=murein biosynthesis integral membrane protein MurJ;protein_id=WP_038825339.1;transl_table=11 NZ_CPUY01000016.1 RefSeq gene 30686 32347 . + . ID=gene-AD853_RS14545;Name=AD853_RS14545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS14545;old_locus_tag=ERS008462_02943 NZ_CPUY01000016.1 Protein Homology CDS 30686 32347 . + 0 ID=cds-WP_038825338.1;Parent=gene-AD853_RS14545;Dbxref=GenBank:WP_038825338.1;Name=WP_038825338.1;Ontology_term=GO:0006811,GO:0015031,GO:0015288,GO:0046930;gbkey=CDS;go_component=pore complex|0046930||IEA;go_function=porin activity|0015288||IEA;go_process=monoatomic ion transport|0006811||IEA,protein transport|0015031||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211213.1;locus_tag=AD853_RS14545;product=ShlB/FhaC/HecB family hemolysin secretion/activation protein;protein_id=WP_038825338.1;transl_table=11 NZ_CPUY01000016.1 RefSeq gene 32390 37243 . + . ID=gene-AD853_RS14550;Name=AD853_RS14550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS14550;old_locus_tag=ERS008462_02944 NZ_CPUY01000016.1 Protein Homology CDS 32390 37243 . + 0 ID=cds-WP_072080833.1;Parent=gene-AD853_RS14550;Dbxref=GenBank:WP_072080833.1;Name=WP_072080833.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105134.1;locus_tag=AD853_RS14550;product=hemagglutinin repeat-containing protein;protein_id=WP_072080833.1;transl_table=11 NZ_CPUY01000016.1 RefSeq gene 37757 38734 . + . ID=gene-AD853_RS22250;Name=AD853_RS22250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS22250;old_locus_tag=ERS008462_02945 NZ_CPUY01000016.1 Protein Homology CDS 37757 38734 . + 0 ID=cds-WP_072080834.1;Parent=gene-AD853_RS22250;Dbxref=GenBank:WP_072080834.1;Name=WP_072080834.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017658.6;locus_tag=AD853_RS22250;product=two-partner secretion domain-containing protein;protein_id=WP_072080834.1;transl_table=11 NZ_CPUY01000016.1 RefSeq gene 39010 41421 . + . ID=gene-AD853_RS22255;Name=AD853_RS22255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS22255;old_locus_tag=ERS008462_02946 NZ_CPUY01000016.1 Protein Homology CDS 39010 41421 . + 0 ID=cds-WP_230674880.1;Parent=gene-AD853_RS22255;Dbxref=GenBank:WP_230674880.1;Name=WP_230674880.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024728.6;locus_tag=AD853_RS22255;product=beta strand repeat-containing protein;protein_id=WP_230674880.1;transl_table=11 NZ_CPUY01000016.1 RefSeq gene 41462 42646 . + . ID=gene-AD853_RS22260;Name=AD853_RS22260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS22260;old_locus_tag=ERS008462_02947 NZ_CPUY01000016.1 Protein Homology CDS 41462 42646 . + 0 ID=cds-WP_230674882.1;Parent=gene-AD853_RS22260;Dbxref=GenBank:WP_230674882.1;Name=WP_230674882.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024728.6;locus_tag=AD853_RS22260;product=hemagglutinin repeat-containing protein;protein_id=WP_230674882.1;transl_table=11 NZ_CPUY01000016.1 RefSeq gene 42713 44443 . - . ID=gene-AD853_RS14560;Name=argS;gbkey=Gene;gene=argS;gene_biotype=protein_coding;locus_tag=AD853_RS14560;old_locus_tag=ERS008462_02948 NZ_CPUY01000016.1 Protein Homology CDS 42713 44443 . - 0 ID=cds-WP_038824358.1;Parent=gene-AD853_RS14560;Dbxref=GenBank:WP_038824358.1;Name=WP_038824358.1;Ontology_term=GO:0006420,GO:0004814,GO:0005524,GO:0005737;gbkey=CDS;gene=argS;go_component=cytoplasm|0005737||IEA;go_function=arginine-tRNA ligase activity|0004814||IEA,ATP binding|0005524||IEA;go_process=arginyl-tRNA aminoacylation|0006420||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416390.1;locus_tag=AD853_RS14560;product=arginine--tRNA ligase;protein_id=WP_038824358.1;transl_table=11 NZ_CPUY01000016.1 RefSeq gene 45050 45598 . + . ID=gene-AD853_RS14565;Name=AD853_RS14565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS14565;old_locus_tag=ERS008462_02949 NZ_CPUY01000016.1 Protein Homology CDS 45050 45598 . + 0 ID=cds-WP_038824357.1;Parent=gene-AD853_RS14565;Dbxref=GenBank:WP_038824357.1;Name=WP_038824357.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211210.1;locus_tag=AD853_RS14565;product=VOC family protein;protein_id=WP_038824357.1;transl_table=11 NZ_CPUY01000016.1 RefSeq gene 45857 46621 . + . ID=gene-AD853_RS14570;Name=cutC;gbkey=Gene;gene=cutC;gene_biotype=protein_coding;locus_tag=AD853_RS14570;old_locus_tag=ERS008462_02950 NZ_CPUY01000016.1 Protein Homology CDS 45857 46621 . + 0 ID=cds-WP_011192410.1;Parent=gene-AD853_RS14570;Dbxref=GenBank:WP_011192410.1;Name=WP_011192410.1;Ontology_term=GO:0055070,GO:0005507;gbkey=CDS;gene=cutC;go_function=copper ion binding|0005507||IEA;go_process=copper ion homeostasis|0055070||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211209.1;locus_tag=AD853_RS14570;product=copper homeostasis protein CutC;protein_id=WP_011192410.1;transl_table=11 NZ_CPUY01000016.1 RefSeq gene 46813 47784 . - . ID=gene-AD853_RS14575;Name=cmoB;gbkey=Gene;gene=cmoB;gene_biotype=protein_coding;locus_tag=AD853_RS14575;old_locus_tag=ERS008462_02951 NZ_CPUY01000016.1 Protein Homology CDS 46813 47784 . - 0 ID=cds-WP_038824356.1;Parent=gene-AD853_RS14575;Dbxref=GenBank:WP_038824356.1;Name=WP_038824356.1;Ontology_term=GO:0002098,GO:0016765;gbkey=CDS;gene=cmoB;go_function=transferase activity%2C transferring alkyl or aryl (other than methyl) groups|0016765||IEA;go_process=tRNA wobble uridine modification|0002098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004945559.1;locus_tag=AD853_RS14575;product=tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB;protein_id=WP_038824356.1;transl_table=11 NZ_CPUY01000016.1 RefSeq gene 47781 48584 . - . ID=gene-AD853_RS14580;Name=cmoA;gbkey=Gene;gene=cmoA;gene_biotype=protein_coding;locus_tag=AD853_RS14580;old_locus_tag=ERS008462_02952 NZ_CPUY01000016.1 Protein Homology CDS 47781 48584 . - 0 ID=cds-WP_033851248.1;Parent=gene-AD853_RS14580;Dbxref=GenBank:WP_033851248.1;Name=WP_033851248.1;gbkey=CDS;gene=cmoA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211207.1;locus_tag=AD853_RS14580;product=carboxy-S-adenosyl-L-methionine synthase CmoA;protein_id=WP_033851248.1;transl_table=11 NZ_CPUY01000016.1 RefSeq gene 48775 49170 . - . ID=gene-AD853_RS14585;Name=AD853_RS14585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS14585;old_locus_tag=ERS008462_02953 NZ_CPUY01000016.1 Protein Homology CDS 48775 49170 . - 0 ID=cds-WP_025383794.1;Parent=gene-AD853_RS14585;Dbxref=GenBank:WP_025383794.1;Name=WP_025383794.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005169168.1;locus_tag=AD853_RS14585;product=MAPEG family protein;protein_id=WP_025383794.1;transl_table=11 NZ_CPUY01000016.1 RefSeq gene 49431 50246 . - . ID=gene-AD853_RS14590;Name=AD853_RS14590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS14590;old_locus_tag=ERS008462_02954 NZ_CPUY01000016.1 Protein Homology CDS 49431 50246 . - 0 ID=cds-WP_033851246.1;Parent=gene-AD853_RS14590;Dbxref=GenBank:WP_033851246.1;Name=WP_033851246.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105129.1;locus_tag=AD853_RS14590;product=DUF72 domain-containing protein;protein_id=WP_033851246.1;transl_table=11 NZ_CPUY01000016.1 RefSeq gene 51074 52870 . + . ID=gene-AD853_RS14595;Name=aspS;gbkey=Gene;gene=aspS;gene_biotype=protein_coding;locus_tag=AD853_RS14595;old_locus_tag=ERS008462_02955 NZ_CPUY01000016.1 Protein Homology CDS 51074 52870 . + 0 ID=cds-WP_002211204.1;Parent=gene-AD853_RS14595;Dbxref=GenBank:WP_002211204.1;Name=WP_002211204.1;Ontology_term=GO:0006422,GO:0004815,GO:0005524,GO:0005737;gbkey=CDS;gene=aspS;go_component=cytoplasm|0005737||IEA;go_function=aspartate-tRNA ligase activity|0004815||IEA,ATP binding|0005524||IEA;go_process=aspartyl-tRNA aminoacylation|0006422||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004874178.1;locus_tag=AD853_RS14595;product=aspartate--tRNA ligase;protein_id=WP_002211204.1;transl_table=11 NZ_CPUY01000016.1 RefSeq gene 52870 53313 . + . ID=gene-AD853_RS14600;Name=nudB;gbkey=Gene;gene=nudB;gene_biotype=protein_coding;locus_tag=AD853_RS14600;old_locus_tag=ERS008462_02956 NZ_CPUY01000016.1 Protein Homology CDS 52870 53313 . + 0 ID=cds-WP_002211203.1;Parent=gene-AD853_RS14600;Dbxref=GenBank:WP_002211203.1;Name=WP_002211203.1;Ontology_term=GO:0046656,GO:0008828,GO:0019177;gbkey=CDS;gene=nudB;go_function=dATP diphosphatase activity|0008828||IEA,dihydroneopterin triphosphate pyrophosphohydrolase activity|0019177||IEA;go_process=folic acid biosynthetic process|0046656||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211203.1;locus_tag=AD853_RS14600;product=dihydroneopterin triphosphate diphosphatase;protein_id=WP_002211203.1;transl_table=11 NZ_CPUY01000016.1 RefSeq gene 53371 54114 . + . ID=gene-AD853_RS14605;Name=AD853_RS14605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS14605;old_locus_tag=ERS008462_02957 NZ_CPUY01000016.1 Protein Homology CDS 53371 54114 . + 0 ID=cds-WP_002211202.1;Parent=gene-AD853_RS14605;Dbxref=GenBank:WP_002211202.1;Name=WP_002211202.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227699.1;locus_tag=AD853_RS14605;product=YebC/PmpR family DNA-binding transcriptional regulator;protein_id=WP_002211202.1;transl_table=11 NZ_CPUY01000016.1 RefSeq gene 54323 54844 . + . ID=gene-AD853_RS14610;Name=ruvC;gbkey=Gene;gene=ruvC;gene_biotype=protein_coding;locus_tag=AD853_RS14610;old_locus_tag=ERS008462_02958 NZ_CPUY01000016.1 Protein Homology CDS 54323 54844 . + 0 ID=cds-WP_002211201.1;Parent=gene-AD853_RS14610;Dbxref=GenBank:WP_002211201.1;Name=WP_002211201.1;Ontology_term=GO:0006310,GO:0008821;gbkey=CDS;gene=ruvC;go_function=crossover junction DNA endonuclease activity|0008821||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005185237.1;locus_tag=AD853_RS14610;product=crossover junction endodeoxyribonuclease RuvC;protein_id=WP_002211201.1;transl_table=11 NZ_CPUY01000016.1 RefSeq gene 54889 55071 . + . ID=gene-AD853_RS22520;Name=AD853_RS22520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS22520 NZ_CPUY01000016.1 Protein Homology CDS 54889 55071 . + 0 ID=cds-WP_313905122.1;Parent=gene-AD853_RS22520;Dbxref=GenBank:WP_313905122.1;Name=WP_313905122.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002220636.1;locus_tag=AD853_RS22520;product=tat protein;protein_id=WP_313905122.1;transl_table=11 NZ_CPUY01000016.1 RefSeq gene 55151 55765 . + . ID=gene-AD853_RS14615;Name=ruvA;gbkey=Gene;gene=ruvA;gene_biotype=protein_coding;locus_tag=AD853_RS14615;old_locus_tag=ERS008462_02959 NZ_CPUY01000016.1 Protein Homology CDS 55151 55765 . + 0 ID=cds-WP_002211199.1;Parent=gene-AD853_RS14615;Dbxref=GenBank:WP_002211199.1;Name=WP_002211199.1;Ontology_term=GO:0006281,GO:0006310,GO:0003678,GO:0009378,GO:0009379;gbkey=CDS;gene=ruvA;go_component=Holliday junction helicase complex|0009379||IEA;go_function=DNA helicase activity|0003678||IEA,four-way junction helicase activity|0009378||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006709047.1;locus_tag=AD853_RS14615;product=Holliday junction branch migration protein RuvA;protein_id=WP_002211199.1;transl_table=11 NZ_CPUY01000016.1 RefSeq gene 55928 56932 . + . ID=gene-AD853_RS14620;Name=ruvB;gbkey=Gene;gene=ruvB;gene_biotype=protein_coding;locus_tag=AD853_RS14620;old_locus_tag=ERS008462_02960 NZ_CPUY01000016.1 Protein Homology CDS 55928 56932 . + 0 ID=cds-WP_002211198.1;Parent=gene-AD853_RS14620;Dbxref=GenBank:WP_002211198.1;Name=WP_002211198.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677,GO:0005524,GO:0009378;gbkey=CDS;gene=ruvB;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,four-way junction helicase activity|0009378||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004715228.1;locus_tag=AD853_RS14620;product=Holliday junction branch migration DNA helicase RuvB;protein_id=WP_002211198.1;transl_table=11 NZ_CPUY01000016.1 RefSeq gene 56987 57772 . - . ID=gene-AD853_RS14625;Name=znuB;gbkey=Gene;gene=znuB;gene_biotype=protein_coding;locus_tag=AD853_RS14625;old_locus_tag=ERS008462_02961 NZ_CPUY01000016.1 Protein Homology CDS 56987 57772 . - 0 ID=cds-WP_002211197.1;Parent=gene-AD853_RS14625;Dbxref=GenBank:WP_002211197.1;Name=WP_002211197.1;Ontology_term=GO:0055085,GO:0042626;gbkey=CDS;gene=znuB;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005169187.1;locus_tag=AD853_RS14625;product=zinc ABC transporter permease subunit ZnuB;protein_id=WP_002211197.1;transl_table=11 NZ_CPUY01000016.1 RefSeq gene 57769 58527 . - . ID=gene-AD853_RS14630;Name=znuC;gbkey=Gene;gene=znuC;gene_biotype=protein_coding;locus_tag=AD853_RS14630;old_locus_tag=ERS008462_02962 NZ_CPUY01000016.1 Protein Homology CDS 57769 58527 . - 0 ID=cds-WP_002228434.1;Parent=gene-AD853_RS14630;Dbxref=GenBank:WP_002228434.1;Name=WP_002228434.1;Ontology_term=GO:0006829,GO:0005524,GO:0015633;gbkey=CDS;gene=znuC;go_function=ATP binding|0005524||IEA,ABC-type zinc transporter activity|0015633||IEA;go_process=zinc ion transport|0006829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011094033.1;locus_tag=AD853_RS14630;product=zinc ABC transporter ATP-binding protein ZnuC;protein_id=WP_002228434.1;transl_table=11 NZ_CPUY01000016.1 RefSeq gene 58603 59559 . + . ID=gene-AD853_RS14635;Name=znuA;gbkey=Gene;gene=znuA;gene_biotype=protein_coding;locus_tag=AD853_RS14635;old_locus_tag=ERS008462_02963 NZ_CPUY01000016.1 Protein Homology CDS 58603 59559 . + 0 ID=cds-WP_038823985.1;Parent=gene-AD853_RS14635;Dbxref=GenBank:WP_038823985.1;Name=WP_038823985.1;Ontology_term=GO:0006829,GO:0046872;gbkey=CDS;gene=znuA;go_function=metal ion binding|0046872||IEA;go_process=zinc ion transport|0006829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304106.1;locus_tag=AD853_RS14635;product=zinc ABC transporter substrate-binding protein ZnuA;protein_id=WP_038823985.1;transl_table=11 NZ_CPUY01000016.1 RefSeq gene 59580 60896 . + . ID=gene-AD853_RS14640;Name=mepM;gbkey=Gene;gene=mepM;gene_biotype=protein_coding;locus_tag=AD853_RS14640;old_locus_tag=ERS008462_02964 NZ_CPUY01000016.1 Protein Homology CDS 59580 60896 . + 0 ID=cds-WP_002228437.1;Parent=gene-AD853_RS14640;Dbxref=GenBank:WP_002228437.1;Name=WP_002228437.1;Ontology_term=GO:0042834;gbkey=CDS;gene=mepM;go_function=peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002228437.1;locus_tag=AD853_RS14640;product=murein DD-endopeptidase MepM;protein_id=WP_002228437.1;transl_table=11 NZ_CPUY01000016.1 RefSeq gene 61163 62125 . + . ID=gene-AD853_RS14645;Name=lpxM;gbkey=Gene;gene=lpxM;gene_biotype=protein_coding;gene_synonym=msbB;locus_tag=AD853_RS14645;old_locus_tag=ERS008462_02965 NZ_CPUY01000016.1 Protein Homology CDS 61163 62125 . + 0 ID=cds-WP_038823986.1;Parent=gene-AD853_RS14645;Dbxref=GenBank:WP_038823986.1;Name=WP_038823986.1;Note=LpxM is lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase%2C an enzyme characterized in Escherichia coli and involved in biosynthesis of the form of lipid A found in that species and some closely related species.;Ontology_term=GO:0009103,GO:0016747,GO:0009276,GO:0016020;gbkey=CDS;gene=lpxM;go_component=Gram-negative-bacterium-type cell wall|0009276||IEA,membrane|0016020||IEA;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004874187.1;locus_tag=AD853_RS14645;product=lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase;protein_id=WP_038823986.1;transl_table=11 NZ_CPUY01000016.1 RefSeq gene 62276 63718 . - . ID=gene-AD853_RS14650;Name=pyk;gbkey=Gene;gene=pyk;gene_biotype=protein_coding;locus_tag=AD853_RS14650;old_locus_tag=ERS008462_02966 NZ_CPUY01000016.1 Protein Homology CDS 62276 63718 . - 0 ID=cds-WP_002211193.1;Parent=gene-AD853_RS14650;Dbxref=GenBank:WP_002211193.1;Name=WP_002211193.1;Ontology_term=GO:0006096,GO:0000287,GO:0004743,GO:0030955;gbkey=CDS;gene=pyk;go_function=magnesium ion binding|0000287||IEA,pyruvate kinase activity|0004743||IEA,potassium ion binding|0030955||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120709.1;locus_tag=AD853_RS14650;product=pyruvate kinase;protein_id=WP_002211193.1;transl_table=11 NZ_CPUY01000016.1 RefSeq gene 64048 64917 . - . ID=gene-AD853_RS14655;Name=AD853_RS14655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS14655;old_locus_tag=ERS008462_02967 NZ_CPUY01000016.1 Protein Homology CDS 64048 64917 . - 0 ID=cds-WP_050124620.1;Parent=gene-AD853_RS14655;Dbxref=GenBank:WP_050124620.1;Name=WP_050124620.1;Ontology_term=GO:0006351,GO:0006355,GO:0003677,GO:0003700,GO:0097367;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,carbohydrate derivative binding|0097367||IEA;go_process=DNA-templated transcription|0006351||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211192.1;locus_tag=AD853_RS14655;product=MurR/RpiR family transcriptional regulator;protein_id=WP_050124620.1;transl_table=11 NZ_CPUY01000016.1 RefSeq gene 65270 66754 . + . ID=gene-AD853_RS14660;Name=zwf;gbkey=Gene;gene=zwf;gene_biotype=protein_coding;locus_tag=AD853_RS14660;old_locus_tag=ERS008462_02968 NZ_CPUY01000016.1 Protein Homology CDS 65270 66754 . + 0 ID=cds-WP_011906215.1;Parent=gene-AD853_RS14660;Dbxref=GenBank:WP_011906215.1;Name=WP_011906215.1;Ontology_term=GO:0006006,GO:0006098,GO:0004345,GO:0016614,GO:0050661;gbkey=CDS;gene=zwf;go_function=glucose-6-phosphate dehydrogenase activity|0004345||IEA,oxidoreductase activity%2C acting on CH-OH group of donors|0016614||IEA,NADP binding|0050661||IEA;go_process=glucose metabolic process|0006006||IEA,pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011906215.1;locus_tag=AD853_RS14660;product=glucose-6-phosphate dehydrogenase;protein_id=WP_011906215.1;transl_table=11 NZ_CPUY01000016.1 RefSeq gene 66996 67637 . + . ID=gene-AD853_RS14670;Name=AD853_RS14670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS14670;old_locus_tag=ERS008462_02970 NZ_CPUY01000016.1 Protein Homology CDS 66996 67637 . + 0 ID=cds-WP_002211190.1;Parent=gene-AD853_RS14670;Dbxref=GenBank:WP_002211190.1;Name=WP_002211190.1;Ontology_term=GO:0016829,GO:0016830,GO:0016832,GO:0016833;gbkey=CDS;go_function=lyase activity|0016829||IEA,carbon-carbon lyase activity|0016830||IEA,aldehyde-lyase activity|0016832||IEA,oxo-acid-lyase activity|0016833||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211190.1;locus_tag=AD853_RS14670;product=bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase;protein_id=WP_002211190.1;transl_table=11 NZ_CPUY01000016.1 RefSeq gene 68325 68768 . + . ID=gene-AD853_RS14675;Name=mdtJ;gbkey=Gene;gene=mdtJ;gene_biotype=protein_coding;locus_tag=AD853_RS14675;old_locus_tag=ERS008462_02971 NZ_CPUY01000016.1 Protein Homology CDS 68325 68768 . + 0 ID=cds-WP_012105125.1;Parent=gene-AD853_RS14675;Dbxref=GenBank:WP_012105125.1;Name=WP_012105125.1;Ontology_term=GO:0015848,GO:0015606,GO:0016020;gbkey=CDS;gene=mdtJ;go_component=membrane|0016020||IEA;go_function=spermidine transmembrane transporter activity|0015606||IEA;go_process=spermidine transport|0015848||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019452797.1;locus_tag=AD853_RS14675;product=multidrug/spermidine efflux SMR transporter subunit MdtJ;protein_id=WP_012105125.1;transl_table=11 NZ_CPUY01000016.1 RefSeq gene 68755 69084 . + . ID=gene-AD853_RS14680;Name=mdtI;gbkey=Gene;gene=mdtI;gene_biotype=protein_coding;locus_tag=AD853_RS14680;old_locus_tag=ERS008462_02972 NZ_CPUY01000016.1 Protein Homology CDS 68755 69084 . + 0 ID=cds-WP_002211187.1;Parent=gene-AD853_RS14680;Dbxref=GenBank:WP_002211187.1;Name=WP_002211187.1;gbkey=CDS;gene=mdtI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005163022.1;locus_tag=AD853_RS14680;product=multidrug/spermidine efflux SMR transporter subunit MdtI;protein_id=WP_002211187.1;transl_table=11 NZ_CPUY01000016.1 RefSeq gene 69216 69560 . - . ID=gene-AD853_RS14685;Name=AD853_RS14685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS14685;old_locus_tag=ERS008462_02973 NZ_CPUY01000016.1 Protein Homology CDS 69216 69560 . - 0 ID=cds-WP_002211186.1;Parent=gene-AD853_RS14685;Dbxref=GenBank:WP_002211186.1;Name=WP_002211186.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005169202.1;locus_tag=AD853_RS14685;product=RidA family protein;protein_id=WP_002211186.1;transl_table=11 NZ_CPUY01000016.1 RefSeq gene 69691 71595 . + . ID=gene-AD853_RS14690;Name=AD853_RS14690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS14690;old_locus_tag=ERS008462_02974 NZ_CPUY01000016.1 Protein Homology CDS 69691 71595 . + 0 ID=cds-WP_011192419.1;Parent=gene-AD853_RS14690;Dbxref=GenBank:WP_011192419.1;Name=WP_011192419.1;Ontology_term=GO:0003676,GO:0003677,GO:0004386,GO:0005524;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,DNA binding|0003677||IEA,helicase activity|0004386||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211185.1;locus_tag=AD853_RS14690;product=ATP-dependent DNA helicase;protein_id=WP_011192419.1;transl_table=11 NZ_CPUY01000016.1 RefSeq gene 71667 72365 . + . ID=gene-AD853_RS14695;Name=tsaB;gbkey=Gene;gene=tsaB;gene_biotype=protein_coding;locus_tag=AD853_RS14695;old_locus_tag=ERS008462_02975 NZ_CPUY01000016.1 Protein Homology CDS 71667 72365 . + 0 ID=cds-WP_002211184.1;Parent=gene-AD853_RS14695;Dbxref=GenBank:WP_002211184.1;Name=WP_002211184.1;Ontology_term=GO:0002949;gbkey=CDS;gene=tsaB;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011816515.1;locus_tag=AD853_RS14695;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB;protein_id=WP_002211184.1;transl_table=11 NZ_CPUY01000016.1 RefSeq gene 72502 73107 . + . ID=gene-AD853_RS14700;Name=AD853_RS14700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS14700;old_locus_tag=ERS008462_02976 NZ_CPUY01000016.1 Protein Homology CDS 72502 73107 . + 0 ID=cds-WP_002211183.1;Parent=gene-AD853_RS14700;Dbxref=GenBank:WP_002211183.1;Name=WP_002211183.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211183.1;locus_tag=AD853_RS14700;product=Slp family lipoprotein;protein_id=WP_002211183.1;transl_table=11 NZ_CPUY01000016.1 RefSeq gene 73108 73215 . - . ID=gene-AD853_RS21605;Name=AD853_RS21605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS21605 NZ_CPUY01000016.1 Protein Homology CDS 73108 73215 . - 0 ID=cds-WP_155406232.1;Parent=gene-AD853_RS21605;Dbxref=GenBank:WP_155406232.1;Name=WP_155406232.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002224869.1;locus_tag=AD853_RS21605;product=gluconate 5-dehydrogenase;protein_id=WP_155406232.1;transl_table=11 NZ_CPUY01000016.1 RefSeq gene 73750 75438 . + . ID=gene-AD853_RS14705;Name=fadD;gbkey=Gene;gene=fadD;gene_biotype=protein_coding;locus_tag=AD853_RS14705;old_locus_tag=ERS008462_02977 NZ_CPUY01000016.1 Protein Homology CDS 73750 75438 . + 0 ID=cds-WP_038824718.1;Parent=gene-AD853_RS14705;Dbxref=GenBank:WP_038824718.1;Name=WP_038824718.1;gbkey=CDS;gene=fadD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002220632.1;locus_tag=AD853_RS14705;product=long-chain-fatty-acid--CoA ligase FadD;protein_id=WP_038824718.1;transl_table=11 NZ_CPUY01000016.1 RefSeq gene 75598 76719 . + . ID=gene-AD853_RS14710;Name=rnd;gbkey=Gene;gene=rnd;gene_biotype=protein_coding;locus_tag=AD853_RS14710;old_locus_tag=ERS008462_02978 NZ_CPUY01000016.1 Protein Homology CDS 75598 76719 . + 0 ID=cds-WP_038824725.1;Parent=gene-AD853_RS14710;Dbxref=GenBank:WP_038824725.1;Name=WP_038824725.1;Ontology_term=GO:0008033,GO:0003676,GO:0008408,GO:0033890;gbkey=CDS;gene=rnd;go_function=nucleic acid binding|0003676||IEA,3'-5' exonuclease activity|0008408||IEA,ribonuclease D activity|0033890||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211181.1;locus_tag=AD853_RS14710;product=ribonuclease D;protein_id=WP_038824725.1;transl_table=11 NZ_CPUY01000016.1 RefSeq gene 76956 77225 . - . ID=gene-AD853_RS14715;Name=minE;gbkey=Gene;gene=minE;gene_biotype=protein_coding;locus_tag=AD853_RS14715;old_locus_tag=ERS008462_02979 NZ_CPUY01000016.1 Protein Homology CDS 76956 77225 . - 0 ID=cds-WP_002211180.1;Parent=gene-AD853_RS14715;Dbxref=GenBank:WP_002211180.1;Name=WP_002211180.1;Ontology_term=GO:0032955;gbkey=CDS;gene=minE;go_process=regulation of division septum assembly|0032955||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015840174.1;locus_tag=AD853_RS14715;product=cell division topological specificity factor MinE;protein_id=WP_002211180.1;transl_table=11 NZ_CPUY01000016.1 RefSeq gene 77229 78041 . - . ID=gene-AD853_RS14720;Name=minD;gbkey=Gene;gene=minD;gene_biotype=protein_coding;locus_tag=AD853_RS14720;old_locus_tag=ERS008462_02980 NZ_CPUY01000016.1 Protein Homology CDS 77229 78041 . - 0 ID=cds-WP_002211179.1;Parent=gene-AD853_RS14720;Dbxref=GenBank:WP_002211179.1;Name=WP_002211179.1;gbkey=CDS;gene=minD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020801817.1;locus_tag=AD853_RS14720;product=septum site-determining protein MinD;protein_id=WP_002211179.1;transl_table=11 NZ_CPUY01000016.1 RefSeq gene 78066 78752 . - . ID=gene-AD853_RS14725;Name=minC;gbkey=Gene;gene=minC;gene_biotype=protein_coding;locus_tag=AD853_RS14725;old_locus_tag=ERS008462_02981 NZ_CPUY01000016.1 Protein Homology CDS 78066 78752 . - 0 ID=cds-WP_002220631.1;Parent=gene-AD853_RS14725;Dbxref=GenBank:WP_002220631.1;Name=WP_002220631.1;Ontology_term=GO:0000918,GO:1901891,GO:0004857;gbkey=CDS;gene=minC;go_function=enzyme inhibitor activity|0004857||IEA;go_process=division septum site selection|0000918||IEA,regulation of cell septum assembly|1901891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019083202.1;locus_tag=AD853_RS14725;product=septum site-determining protein MinC;protein_id=WP_002220631.1;transl_table=11 NZ_CPUY01000016.1 RefSeq gene 79489 79761 . + . ID=gene-AD853_RS14730;Name=AD853_RS14730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS14730;old_locus_tag=ERS008462_02982 NZ_CPUY01000016.1 Protein Homology CDS 79489 79761 . + 0 ID=cds-WP_002211743.1;Parent=gene-AD853_RS14730;Dbxref=GenBank:WP_002211743.1;Name=WP_002211743.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005162995.1;locus_tag=AD853_RS14730;product=YcgL domain-containing protein;protein_id=WP_002211743.1;transl_table=11 NZ_CPUY01000016.1 RefSeq gene 79844 80056 . - . ID=gene-AD853_RS22265;Name=AD853_RS22265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS22265 NZ_CPUY01000016.1 Protein Homology CDS 79844 80056 . - 0 ID=cds-WP_002211742.1;Parent=gene-AD853_RS22265;Dbxref=GenBank:WP_002211742.1;Name=WP_002211742.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211742.1;locus_tag=AD853_RS22265;product=hypothetical protein;protein_id=WP_002211742.1;transl_table=11 NZ_CPUY01000016.1 RefSeq gene 80019 80987 . + . ID=gene-AD853_RS14735;Name=AD853_RS14735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS14735;old_locus_tag=ERS008462_02983 NZ_CPUY01000016.1 Protein Homology CDS 80019 80987 . + 0 ID=cds-WP_370696091.1;Parent=gene-AD853_RS14735;Dbxref=GenBank:WP_370696091.1;Name=WP_370696091.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016257570.1;locus_tag=AD853_RS14735;product=lytic murein transglycosylase;protein_id=WP_370696091.1;transl_table=11 NZ_CPUY01000016.1 RefSeq gene 81058 81714 . + . ID=gene-AD853_RS14740;Name=AD853_RS14740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS14740;old_locus_tag=ERS008462_02984 NZ_CPUY01000016.1 Protein Homology CDS 81058 81714 . + 0 ID=cds-WP_002211740.1;Parent=gene-AD853_RS14740;Dbxref=GenBank:WP_002211740.1;Name=WP_002211740.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211740.1;locus_tag=AD853_RS14740;product=fumarylacetoacetate hydrolase family protein;protein_id=WP_002211740.1;transl_table=11 NZ_CPUY01000016.1 RefSeq gene 81817 82263 . + . ID=gene-AD853_RS14745;Name=AD853_RS14745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS14745;old_locus_tag=ERS008462_02985 NZ_CPUY01000016.1 Protein Homology CDS 81817 82263 . + 0 ID=cds-WP_002211739.1;Parent=gene-AD853_RS14745;Dbxref=GenBank:WP_002211739.1;Name=WP_002211739.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309703.5;locus_tag=AD853_RS14745;product=YcgN family cysteine cluster protein;protein_id=WP_002211739.1;transl_table=11 NZ_CPUY01000016.1 RefSeq gene 82364 83536 . - . ID=gene-AD853_RS14750;Name=AD853_RS14750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS14750;old_locus_tag=ERS008462_02986 NZ_CPUY01000016.1 Protein Homology CDS 82364 83536 . - 0 ID=cds-WP_002214492.1;Parent=gene-AD853_RS14750;Dbxref=GenBank:WP_002214492.1;Name=WP_002214492.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002214492.1;locus_tag=AD853_RS14750;product=MFS transporter;protein_id=WP_002214492.1;transl_table=11 NZ_CPUY01000016.1 RefSeq gene 83540 84739 . - . ID=gene-AD853_RS14755;Name=AD853_RS14755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS14755;old_locus_tag=ERS008462_02987 NZ_CPUY01000016.1 Protein Homology CDS 83540 84739 . - 0 ID=cds-WP_038824719.1;Parent=gene-AD853_RS14755;Dbxref=GenBank:WP_038824719.1;Name=WP_038824719.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105123.1;locus_tag=AD853_RS14755;product=cysteine desulfurase family protein;protein_id=WP_038824719.1;transl_table=11 NZ_CPUY01000016.1 RefSeq gene 84756 85496 . - . ID=gene-AD853_RS14760;Name=AD853_RS14760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS14760;old_locus_tag=ERS008462_02988 NZ_CPUY01000016.1 Protein Homology CDS 84756 85496 . - 0 ID=cds-WP_002211692.1;Parent=gene-AD853_RS14760;Dbxref=GenBank:WP_002211692.1;Name=WP_002211692.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016586381.1;locus_tag=AD853_RS14760;product=hypothetical protein;protein_id=WP_002211692.1;transl_table=11 NZ_CPUY01000016.1 RefSeq gene 86587 86943 . + . ID=gene-AD853_RS14765;Name=AD853_RS14765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS14765;old_locus_tag=ERS008462_02989 NZ_CPUY01000016.1 Protein Homology CDS 86587 86943 . + 0 ID=cds-WP_002214494.1;Parent=gene-AD853_RS14765;Dbxref=GenBank:WP_002214494.1;Name=WP_002214494.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002214494.1;locus_tag=AD853_RS14765;product=hypothetical protein;protein_id=WP_002214494.1;transl_table=11 NZ_CPUY01000016.1 RefSeq gene 87055 87216 . - . ID=gene-AD853_RS22270;Name=AD853_RS22270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS22270 NZ_CPUY01000016.1 Protein Homology CDS 87055 87216 . - 0 ID=cds-WP_223847753.1;Parent=gene-AD853_RS22270;Dbxref=GenBank:WP_223847753.1;Name=WP_223847753.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF038384.1;locus_tag=AD853_RS22270;product=YnfU family zinc-binding protein;protein_id=WP_223847753.1;transl_table=11 NZ_CPUY01000016.1 RefSeq gene 87360 87890 . - . ID=gene-AD853_RS14770;Name=dsbB;gbkey=Gene;gene=dsbB;gene_biotype=protein_coding;locus_tag=AD853_RS14770;old_locus_tag=ERS008462_02990 NZ_CPUY01000016.1 Protein Homology CDS 87360 87890 . - 0 ID=cds-WP_002227934.1;Parent=gene-AD853_RS14770;Dbxref=GenBank:WP_002227934.1;Name=WP_002227934.1;Ontology_term=GO:0006457,GO:0015035,GO:0016020;gbkey=CDS;gene=dsbB;go_component=membrane|0016020||IEA;go_function=protein-disulfide reductase activity|0015035||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002227934.1;locus_tag=AD853_RS14770;product=disulfide bond formation protein DsbB;protein_id=WP_002227934.1;transl_table=11 NZ_CPUY01000016.1 RefSeq gene 88126 89700 . - . ID=gene-AD853_RS14775;Name=nhaB;gbkey=Gene;gene=nhaB;gene_biotype=protein_coding;locus_tag=AD853_RS14775;old_locus_tag=ERS008462_02991 NZ_CPUY01000016.1 Protein Homology CDS 88126 89700 . - 0 ID=cds-WP_012304099.1;Parent=gene-AD853_RS14775;Dbxref=GenBank:WP_012304099.1;Name=WP_012304099.1;Ontology_term=GO:0006814,GO:0015385,GO:0016020;gbkey=CDS;gene=nhaB;go_component=membrane|0016020||IEA;go_function=sodium:proton antiporter activity|0015385||IEA;go_process=sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011816442.1;locus_tag=AD853_RS14775;product=sodium/proton antiporter NhaB;protein_id=WP_012304099.1;transl_table=11 NZ_CPUY01000016.1 RefSeq gene 89944 90663 . + . ID=gene-AD853_RS14780;Name=fadR;gbkey=Gene;gene=fadR;gene_biotype=protein_coding;locus_tag=AD853_RS14780;old_locus_tag=ERS008462_02992 NZ_CPUY01000016.1 Protein Homology CDS 89944 90663 . + 0 ID=cds-WP_002211688.1;Parent=gene-AD853_RS14780;Dbxref=GenBank:WP_002211688.1;Name=WP_002211688.1;Ontology_term=GO:0006355,GO:0019217,GO:0000062,GO:0003677,GO:0003700;gbkey=CDS;gene=fadR;go_function=fatty-acyl-CoA binding|0000062||IEA,DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,regulation of fatty acid metabolic process|0019217||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211688.1;locus_tag=AD853_RS14780;product=fatty acid metabolism transcriptional regulator FadR;protein_id=WP_002211688.1;transl_table=11 NZ_CPUY01000016.1 RefSeq gene 90732 92267 . - . ID=gene-AD853_RS14785;Name=AD853_RS14785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS14785;old_locus_tag=ERS008462_02993 NZ_CPUY01000016.1 Protein Homology CDS 90732 92267 . - 0 ID=cds-WP_011192425.1;Parent=gene-AD853_RS14785;Dbxref=GenBank:WP_011192425.1;Name=WP_011192425.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192425.1;locus_tag=AD853_RS14785;product=SpoVR family protein;protein_id=WP_011192425.1;transl_table=11 NZ_CPUY01000016.1 RefSeq gene 92733 94037 . + . ID=gene-AD853_RS14790;Name=AD853_RS14790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS14790;old_locus_tag=ERS008462_02994 NZ_CPUY01000016.1 Protein Homology CDS 92733 94037 . + 0 ID=cds-WP_002211686.1;Parent=gene-AD853_RS14790;Dbxref=GenBank:WP_002211686.1;Name=WP_002211686.1;Ontology_term=GO:0055130,GO:0008718,GO:0016491,GO:0071949;gbkey=CDS;go_function=D-amino-acid dehydrogenase activity|0008718||IEA,oxidoreductase activity|0016491||IEA,FAD binding|0071949||IEA;go_process=D-alanine catabolic process|0055130||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005169245.1;locus_tag=AD853_RS14790;product=D-amino acid dehydrogenase;protein_id=WP_002211686.1;transl_table=11 NZ_CPUY01000016.1 RefSeq gene 94066 95259 . - . ID=gene-AD853_RS14795;Name=AD853_RS14795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS14795;old_locus_tag=ERS008462_02995 NZ_CPUY01000016.1 Protein Homology CDS 94066 95259 . - 0 ID=cds-WP_038824721.1;Parent=gene-AD853_RS14795;Dbxref=GenBank:WP_038824721.1;Name=WP_038824721.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005162928.1;locus_tag=AD853_RS14795;product=multidrug effflux MFS transporter;protein_id=WP_038824721.1;transl_table=11 NZ_CPUY01000016.1 RefSeq gene 95524 96393 . - . ID=gene-AD853_RS14800;Name=AD853_RS14800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS14800;old_locus_tag=ERS008462_02996 NZ_CPUY01000016.1 Protein Homology CDS 95524 96393 . - 0 ID=cds-WP_002211685.1;Parent=gene-AD853_RS14800;Dbxref=GenBank:WP_002211685.1;Name=WP_002211685.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211685.1;locus_tag=AD853_RS14800;product=pirin family protein;protein_id=WP_002211685.1;transl_table=11 NZ_CPUY01000016.1 RefSeq pseudogene 96591 97496 . + . ID=gene-AD853_RS14805;Name=AD853_RS14805;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD853_RS14805;old_locus_tag=ERS008462_02998;pseudo=true NZ_CPUY01000016.1 Protein Homology CDS 96591 97496 . + 0 ID=cds-AD853_RS14805;Parent=gene-AD853_RS14805;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211684.1;locus_tag=AD853_RS14805;product=LysR family transcriptional regulator;pseudo=true;transl_table=11 NZ_CPUY01000016.1 RefSeq gene 97531 98634 . - . ID=gene-AD853_RS14810;Name=AD853_RS14810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS14810;old_locus_tag=ERS008462_02999 NZ_CPUY01000016.1 Protein Homology CDS 97531 98634 . - 0 ID=cds-WP_038399866.1;Parent=gene-AD853_RS14810;Dbxref=GenBank:WP_038399866.1;Name=WP_038399866.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192428.1;locus_tag=AD853_RS14810;product=DMT family transporter;protein_id=WP_038399866.1;transl_table=11 NZ_CPUY01000016.1 RefSeq gene 98742 100016 . - . ID=gene-AD853_RS14815;Name=AD853_RS14815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS14815;old_locus_tag=ERS008462_03000 NZ_CPUY01000016.1 Protein Homology CDS 98742 100016 . - 0 ID=cds-WP_038824722.1;Parent=gene-AD853_RS14815;Dbxref=GenBank:WP_038824722.1;Name=WP_038824722.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002216501.1;locus_tag=AD853_RS14815;product=YeaH/YhbH family protein;protein_id=WP_038824722.1;transl_table=11 NZ_CPUY01000016.1 RefSeq gene 100166 102100 . - . ID=gene-AD853_RS14820;Name=yeaG;gbkey=Gene;gene=yeaG;gene_biotype=protein_coding;locus_tag=AD853_RS14820;old_locus_tag=ERS008462_03001 NZ_CPUY01000016.1 Protein Homology CDS 100166 102100 . - 0 ID=cds-WP_002211681.1;Parent=gene-AD853_RS14820;Dbxref=GenBank:WP_002211681.1;Name=WP_002211681.1;gbkey=CDS;gene=yeaG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011411173.1;locus_tag=AD853_RS14820;product=protein kinase YeaG;protein_id=WP_002211681.1;transl_table=11 NZ_CPUY01000016.1 RefSeq gene 102148 102360 . + . ID=gene-AD853_RS22525;Name=AD853_RS22525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS22525 NZ_CPUY01000016.1 Protein Homology CDS 102148 102360 . + 0 ID=cds-WP_002221841.1;Parent=gene-AD853_RS22525;Dbxref=GenBank:WP_002221841.1;Name=WP_002221841.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002221841.1;locus_tag=AD853_RS22525;product=hypothetical protein;protein_id=WP_002221841.1;transl_table=11 NZ_CPUY01000016.1 RefSeq gene 102523 103293 . + . ID=gene-AD853_RS14825;Name=AD853_RS14825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS14825;old_locus_tag=ERS008462_03002 NZ_CPUY01000016.1 Protein Homology CDS 102523 103293 . + 0 ID=cds-WP_002211680.1;Parent=gene-AD853_RS14825;Dbxref=GenBank:WP_002211680.1;Name=WP_002211680.1;Ontology_term=GO:0009252,GO:0030674,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=protein-macromolecule adaptor activity|0030674||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014462352.1;locus_tag=AD853_RS14825;product=MipA/OmpV family protein;protein_id=WP_002211680.1;transl_table=11 NZ_CPUY01000016.1 RefSeq gene 103366 104241 . - . ID=gene-AD853_RS14830;Name=AD853_RS14830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS14830;old_locus_tag=ERS008462_03003 NZ_CPUY01000016.1 Protein Homology CDS 103366 104241 . - 0 ID=cds-WP_002211679.1;Parent=gene-AD853_RS14830;Dbxref=GenBank:WP_002211679.1;Name=WP_002211679.1;Ontology_term=GO:0005975,GO:0016857;gbkey=CDS;go_function=racemase and epimerase activity%2C acting on carbohydrates and derivatives|0016857||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105122.1;locus_tag=AD853_RS14830;product=D-hexose-6-phosphate mutarotase;protein_id=WP_002211679.1;transl_table=11 NZ_CPUY01000016.1 RefSeq gene 104565 105560 . - . ID=gene-AD853_RS14835;Name=gapA;gbkey=Gene;gene=gapA;gene_biotype=protein_coding;locus_tag=AD853_RS14835;old_locus_tag=ERS008462_03004 NZ_CPUY01000016.1 Protein Homology CDS 104565 105560 . - 0 ID=cds-WP_002224141.1;Parent=gene-AD853_RS14835;Dbxref=GenBank:WP_002224141.1;Name=WP_002224141.1;gbkey=CDS;gene=gapA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310515.1;locus_tag=AD853_RS14835;product=glyceraldehyde-3-phosphate dehydrogenase;protein_id=WP_002224141.1;transl_table=11 NZ_CPUY01000016.1 RefSeq gene 105908 106321 . + . ID=gene-AD853_RS14840;Name=msrB;gbkey=Gene;gene=msrB;gene_biotype=protein_coding;locus_tag=AD853_RS14840;old_locus_tag=ERS008462_03005 NZ_CPUY01000016.1 Protein Homology CDS 105908 106321 . + 0 ID=cds-WP_002211677.1;Parent=gene-AD853_RS14840;Dbxref=GenBank:WP_002211677.1;Name=WP_002211677.1;Ontology_term=GO:0006979,GO:0030091,GO:0033743;gbkey=CDS;gene=msrB;go_function=peptide-methionine (R)-S-oxide reductase activity|0033743||IEA;go_process=response to oxidative stress|0006979||IEA,protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004715275.1;locus_tag=AD853_RS14840;product=peptide-methionine (R)-S-oxide reductase MsrB;protein_id=WP_002211677.1;transl_table=11 NZ_CPUY01000016.1 RefSeq gene 106392 106664 . + . ID=gene-AD853_RS14845;Name=AD853_RS14845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS14845;old_locus_tag=ERS008462_03006 NZ_CPUY01000016.1 Protein Homology CDS 106392 106664 . + 0 ID=cds-WP_002217933.1;Parent=gene-AD853_RS14845;Dbxref=GenBank:WP_002217933.1;Name=WP_002217933.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005162905.1;locus_tag=AD853_RS14845;product=YeaC family protein;protein_id=WP_002217933.1;transl_table=11 NZ_CPUY01000016.1 RefSeq gene 106798 107445 . - . ID=gene-AD853_RS14850;Name=pncA;gbkey=Gene;gene=pncA;gene_biotype=protein_coding;locus_tag=AD853_RS14850;old_locus_tag=ERS008462_03007 NZ_CPUY01000016.1 Protein Homology CDS 106798 107445 . - 0 ID=cds-WP_038824986.1;Parent=gene-AD853_RS14850;Dbxref=GenBank:WP_038824986.1;Name=WP_038824986.1;gbkey=CDS;gene=pncA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211676.1;locus_tag=AD853_RS14850;product=bifunctional nicotinamidase/pyrazinamidase;protein_id=WP_038824986.1;transl_table=11 NZ_CPUY01000016.1 RefSeq gene 107460 108476 . - . ID=gene-AD853_RS14855;Name=ansA;gbkey=Gene;gene=ansA;gene_biotype=protein_coding;locus_tag=AD853_RS14855;old_locus_tag=ERS008462_03008 NZ_CPUY01000016.1 Protein Homology CDS 107460 108476 . - 0 ID=cds-WP_011192430.1;Parent=gene-AD853_RS14855;Dbxref=GenBank:WP_011192430.1;Name=WP_011192430.1;Ontology_term=GO:0006520,GO:0004067;gbkey=CDS;gene=ansA;go_function=asparaginase activity|0004067||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192430.1;locus_tag=AD853_RS14855;product=asparaginase;protein_id=WP_011192430.1;transl_table=11 NZ_CPUY01000016.1 RefSeq gene 108593 110443 . - . ID=gene-AD853_RS14860;Name=sppA;gbkey=Gene;gene=sppA;gene_biotype=protein_coding;locus_tag=AD853_RS14860;old_locus_tag=ERS008462_03009 NZ_CPUY01000016.1 Protein Homology CDS 108593 110443 . - 0 ID=cds-WP_011192431.1;Parent=gene-AD853_RS14860;Dbxref=GenBank:WP_011192431.1;Name=WP_011192431.1;Ontology_term=GO:0006465,GO:0008233;gbkey=CDS;gene=sppA;go_function=peptidase activity|0008233||IEA;go_process=signal peptide processing|0006465||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019083189.1;locus_tag=AD853_RS14860;product=signal peptide peptidase SppA;protein_id=WP_011192431.1;transl_table=11 NZ_CPUY01000016.1 RefSeq gene 110606 111157 . + . ID=gene-AD853_RS14865;Name=AD853_RS14865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS14865;old_locus_tag=ERS008462_03010 NZ_CPUY01000016.1 Protein Homology CDS 110606 111157 . + 0 ID=cds-WP_038399863.1;Parent=gene-AD853_RS14865;Dbxref=GenBank:WP_038399863.1;Name=WP_038399863.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304095.1;locus_tag=AD853_RS14865;product=NAD(P)H nitroreductase;protein_id=WP_038399863.1;transl_table=11 NZ_CPUY01000016.1 RefSeq gene 111382 112428 . + . ID=gene-AD853_RS14870;Name=selD;gbkey=Gene;gene=selD;gene_biotype=protein_coding;locus_tag=AD853_RS14870;old_locus_tag=ERS008462_03011 NZ_CPUY01000016.1 Protein Homology CDS 111382 112428 . + 0 ID=cds-WP_011192432.1;Parent=gene-AD853_RS14870;Dbxref=GenBank:WP_011192432.1;Name=WP_011192432.1;Ontology_term=GO:0016260,GO:0004756;gbkey=CDS;gene=selD;go_function=selenide%2C water dikinase activity|0004756||IEA;go_process=selenocysteine biosynthetic process|0016260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211671.1;locus_tag=AD853_RS14870;product=selenide%2C water dikinase SelD;protein_id=WP_011192432.1;transl_table=11 NZ_CPUY01000016.1 RefSeq gene 112475 114400 . + . ID=gene-AD853_RS14875;Name=AD853_RS14875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS14875;old_locus_tag=ERS008462_03012 NZ_CPUY01000016.1 Protein Homology CDS 112475 114400 . + 0 ID=cds-WP_050124618.1;Parent=gene-AD853_RS14875;Dbxref=GenBank:WP_050124618.1;Name=WP_050124618.1;Ontology_term=GO:0006261,GO:0006265,GO:0006310,GO:0051304,GO:0003677,GO:0003916,GO:0003917,GO:0098847;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA topoisomerase activity|0003916||IEA,DNA topoisomerase type I (single strand cut%2C ATP-independent) activity|0003917||IEA,sequence-specific single stranded DNA binding|0098847||IEA;go_process=DNA-templated DNA replication|0006261||IEA,DNA topological change|0006265||IEA,DNA recombination|0006310||IEA,chromosome separation|0051304||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105118.1;locus_tag=AD853_RS14875;product=DNA topoisomerase III;protein_id=WP_050124618.1;transl_table=11 NZ_CPUY01000016.1 RefSeq gene 114397 114687 . + . ID=gene-AD853_RS14880;Name=AD853_RS14880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS14880;old_locus_tag=ERS008462_03013 NZ_CPUY01000016.1 Protein Homology CDS 114397 114687 . + 0 ID=cds-WP_002211669.1;Parent=gene-AD853_RS14880;Dbxref=GenBank:WP_002211669.1;Name=WP_002211669.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211669.1;locus_tag=AD853_RS14880;product=DUF1496 domain-containing protein;protein_id=WP_002211669.1;transl_table=11 NZ_CPUY01000016.1 RefSeq gene 114700 115086 . - . ID=gene-AD853_RS14885;Name=AD853_RS14885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS14885;old_locus_tag=ERS008462_03014 NZ_CPUY01000016.1 Protein Homology CDS 114700 115086 . - 0 ID=cds-WP_002211668.1;Parent=gene-AD853_RS14885;Dbxref=GenBank:WP_002211668.1;Name=WP_002211668.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211668.1;locus_tag=AD853_RS14885;product=pyrimidine (deoxy)nucleoside triphosphate diphosphatase;protein_id=WP_002211668.1;transl_table=11 NZ_CPUY01000016.1 RefSeq gene 115184 115990 . - . ID=gene-AD853_RS14890;Name=xthA;gbkey=Gene;gene=xthA;gene_biotype=protein_coding;locus_tag=AD853_RS14890;old_locus_tag=ERS008462_03015 NZ_CPUY01000016.1 Protein Homology CDS 115184 115990 . - 0 ID=cds-WP_002211667.1;Parent=gene-AD853_RS14890;Dbxref=GenBank:WP_002211667.1;Name=WP_002211667.1;Ontology_term=GO:0006281,GO:0003677,GO:0004519,GO:0008311;gbkey=CDS;gene=xthA;go_function=DNA binding|0003677||IEA,endonuclease activity|0004519||IEA,double-stranded DNA 3'-5' DNA exonuclease activity|0008311||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017893059.1;locus_tag=AD853_RS14890;product=exodeoxyribonuclease III;protein_id=WP_002211667.1;transl_table=11 NZ_CPUY01000016.1 RefSeq gene 116800 117660 . + . ID=gene-AD853_RS14895;Name=AD853_RS14895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS14895;old_locus_tag=ERS008462_03016 NZ_CPUY01000016.1 Protein Homology CDS 116800 117660 . + 0 ID=cds-WP_038824987.1;Parent=gene-AD853_RS14895;Dbxref=GenBank:WP_038824987.1;Name=WP_038824987.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211665.1;locus_tag=AD853_RS14895;product=LysR family transcriptional regulator;protein_id=WP_038824987.1;transl_table=11 ##sequence-region NZ_CPUY01000017.1 1 99464 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=633 NZ_CPUY01000017.1 RefSeq region 1 99464 . + . ID=NZ_CPUY01000017.1:1..99464;Dbxref=taxon:633;collection-date=1900/2008;country=South Africa;gbkey=Src;genome=genomic;isolation-source=not known;mol_type=genomic DNA;nat-host=pig;serovar=O:3;strain=IP32544 NZ_CPUY01000017.1 RefSeq gene 1092 1394 . + . ID=gene-AD853_RS14900;Name=AD853_RS14900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS14900;old_locus_tag=ERS008462_03017 NZ_CPUY01000017.1 Protein Homology CDS 1092 1394 . + 0 ID=cds-WP_002215288.1;Parent=gene-AD853_RS14900;Dbxref=GenBank:WP_002215288.1;Name=WP_002215288.1;Ontology_term=GO:0043419,GO:0009039,GO:0016151;gbkey=CDS;go_function=urease activity|0009039||IEA,nickel cation binding|0016151||IEA;go_process=urea catabolic process|0043419||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003444963.1;locus_tag=AD853_RS14900;product=urease subunit gamma;protein_id=WP_002215288.1;transl_table=11 NZ_CPUY01000017.1 RefSeq gene 1447 1881 . + . ID=gene-AD853_RS14905;Name=ureB;gbkey=Gene;gene=ureB;gene_biotype=protein_coding;locus_tag=AD853_RS14905;old_locus_tag=ERS008462_03018 NZ_CPUY01000017.1 Protein Homology CDS 1447 1881 . + 0 ID=cds-WP_032466963.1;Parent=gene-AD853_RS14905;Dbxref=GenBank:WP_032466963.1;Name=WP_032466963.1;Ontology_term=GO:0043419,GO:0009039,GO:0035550;gbkey=CDS;gene=ureB;go_component=urease complex|0035550||IEA;go_function=urease activity|0009039||IEA;go_process=urea catabolic process|0043419||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019082131.1;locus_tag=AD853_RS14905;product=urease subunit beta;protein_id=WP_032466963.1;transl_table=11 NZ_CPUY01000017.1 RefSeq gene 1971 3689 . + . ID=gene-AD853_RS14910;Name=AD853_RS14910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS14910;old_locus_tag=ERS008462_03019 NZ_CPUY01000017.1 Protein Homology CDS 1971 3689 . + 0 ID=cds-WP_002212229.1;Parent=gene-AD853_RS14910;Dbxref=GenBank:WP_002212229.1;Name=WP_002212229.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002422514.1;locus_tag=AD853_RS14910;product=urease subunit alpha;protein_id=WP_002212229.1;transl_table=11 NZ_CPUY01000017.1 RefSeq gene 3985 4680 . + . ID=gene-AD853_RS14915;Name=ureE;gbkey=Gene;gene=ureE;gene_biotype=protein_coding;locus_tag=AD853_RS14915;old_locus_tag=ERS008462_03020 NZ_CPUY01000017.1 Protein Homology CDS 3985 4680 . + 0 ID=cds-WP_011192844.1;Parent=gene-AD853_RS14915;Dbxref=GenBank:WP_011192844.1;Name=WP_011192844.1;gbkey=CDS;gene=ureE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192844.1;locus_tag=AD853_RS14915;product=urease accessory protein UreE;protein_id=WP_011192844.1;transl_table=11 NZ_CPUY01000017.1 RefSeq gene 4702 5388 . + . ID=gene-AD853_RS14920;Name=AD853_RS14920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS14920;old_locus_tag=ERS008462_03021 NZ_CPUY01000017.1 Protein Homology CDS 4702 5388 . + 0 ID=cds-WP_002212231.1;Parent=gene-AD853_RS14920;Dbxref=GenBank:WP_002212231.1;Name=WP_002212231.1;Ontology_term=GO:0016151;gbkey=CDS;go_function=nickel cation binding|0016151||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005188829.1;locus_tag=AD853_RS14920;product=urease accessory protein UreF;protein_id=WP_002212231.1;transl_table=11 NZ_CPUY01000017.1 RefSeq gene 5515 6177 . + . ID=gene-AD853_RS14925;Name=ureG;gbkey=Gene;gene=ureG;gene_biotype=protein_coding;locus_tag=AD853_RS14925;old_locus_tag=ERS008462_03022 NZ_CPUY01000017.1 Protein Homology CDS 5515 6177 . + 0 ID=cds-WP_002212232.1;Parent=gene-AD853_RS14925;Dbxref=GenBank:WP_002212232.1;Name=WP_002212232.1;Ontology_term=GO:0019627,GO:0003924,GO:0016530,GO:0046872;gbkey=CDS;gene=ureG;go_function=GTPase activity|0003924||IEA,metallochaperone activity|0016530||IEA,metal ion binding|0046872||IEA;go_process=urea metabolic process|0019627||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212232.1;locus_tag=AD853_RS14925;product=urease accessory protein UreG;protein_id=WP_002212232.1;transl_table=11 NZ_CPUY01000017.1 RefSeq gene 6174 7139 . + . ID=gene-AD853_RS14930;Name=AD853_RS14930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS14930;old_locus_tag=ERS008462_03023 NZ_CPUY01000017.1 Protein Homology CDS 6174 7139 . + 0 ID=cds-WP_038824164.1;Parent=gene-AD853_RS14930;Dbxref=GenBank:WP_038824164.1;Name=WP_038824164.1;Ontology_term=GO:0008152,GO:0016151;gbkey=CDS;go_function=nickel cation binding|0016151||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019082134.1;locus_tag=AD853_RS14930;product=urease accessory protein UreD;protein_id=WP_038824164.1;transl_table=11 NZ_CPUY01000017.1 RefSeq gene 7331 8323 . + . ID=gene-AD853_RS14935;Name=yut;gbkey=Gene;gene=yut;gene_biotype=protein_coding;locus_tag=AD853_RS14935;old_locus_tag=ERS008462_03024 NZ_CPUY01000017.1 Protein Homology CDS 7331 8323 . + 0 ID=cds-WP_038824161.1;Parent=gene-AD853_RS14935;Dbxref=GenBank:WP_038824161.1;Name=WP_038824161.1;Ontology_term=GO:0015840,GO:0015204,GO:0016020;gbkey=CDS;gene=yut;go_component=membrane|0016020||IEA;go_function=urea transmembrane transporter activity|0015204||IEA;go_process=urea transport|0015840||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012104759.1;locus_tag=AD853_RS14935;product=urea transporter;protein_id=WP_038824161.1;transl_table=11 NZ_CPUY01000017.1 RefSeq gene 8472 9530 . + . ID=gene-AD853_RS14940;Name=AD853_RS14940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS14940;old_locus_tag=ERS008462_03025 NZ_CPUY01000017.1 Protein Homology CDS 8472 9530 . + 0 ID=cds-WP_050124621.1;Parent=gene-AD853_RS14940;Dbxref=GenBank:WP_050124621.1;Name=WP_050124621.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192840.1;locus_tag=AD853_RS14940;product=HoxN/HupN/NixA family nickel/cobalt transporter;protein_id=WP_050124621.1;transl_table=11 NZ_CPUY01000017.1 RefSeq gene 9679 10008 . - . ID=gene-AD853_RS14945;Name=hdeB;gbkey=Gene;gene=hdeB;gene_biotype=protein_coding;locus_tag=AD853_RS14945;old_locus_tag=ERS008462_03026 NZ_CPUY01000017.1 Protein Homology CDS 9679 10008 . - 0 ID=cds-WP_002212235.1;Parent=gene-AD853_RS14945;Dbxref=GenBank:WP_002212235.1;Name=WP_002212235.1;gbkey=CDS;gene=hdeB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011906270.1;locus_tag=AD853_RS14945;product=acid-activated periplasmic chaperone HdeB;protein_id=WP_002212235.1;transl_table=11 NZ_CPUY01000017.1 RefSeq gene 10626 11801 . + . ID=gene-AD853_RS14955;Name=kch;gbkey=Gene;gene=kch;gene_biotype=protein_coding;locus_tag=AD853_RS14955;old_locus_tag=ERS008462_03027 NZ_CPUY01000017.1 Protein Homology CDS 10626 11801 . + 0 ID=cds-WP_011192839.1;Parent=gene-AD853_RS14955;Dbxref=GenBank:WP_011192839.1;Name=WP_011192839.1;gbkey=CDS;gene=kch;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212236.1;locus_tag=AD853_RS14955;product=voltage-gated potassium channel protein;protein_id=WP_011192839.1;transl_table=11 NZ_CPUY01000017.1 RefSeq gene 11899 12303 . - . ID=gene-AD853_RS14960;Name=crcB;gbkey=Gene;gene=crcB;gene_biotype=protein_coding;locus_tag=AD853_RS14960;old_locus_tag=ERS008462_03028 NZ_CPUY01000017.1 Protein Homology CDS 11899 12303 . - 0 ID=cds-WP_002212237.1;Parent=gene-AD853_RS14960;Dbxref=GenBank:WP_002212237.1;Name=WP_002212237.1;gbkey=CDS;gene=crcB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212237.1;locus_tag=AD853_RS14960;product=fluoride efflux transporter CrcB;protein_id=WP_002212237.1;transl_table=11 NZ_CPUY01000017.1 RefSeq gene 12319 12699 . - . ID=gene-AD853_RS14965;Name=crcB;gbkey=Gene;gene=crcB;gene_biotype=protein_coding;locus_tag=AD853_RS14965;old_locus_tag=ERS008462_03029 NZ_CPUY01000017.1 Protein Homology CDS 12319 12699 . - 0 ID=cds-WP_011192838.1;Parent=gene-AD853_RS14965;Dbxref=GenBank:WP_011192838.1;Name=WP_011192838.1;Ontology_term=GO:1903424,GO:1903425,GO:0016020;gbkey=CDS;gene=crcB;go_component=membrane|0016020||IEA;go_function=fluoride transmembrane transporter activity|1903425||IEA;go_process=fluoride transmembrane transport|1903424||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005172952.1;locus_tag=AD853_RS14965;product=fluoride efflux transporter CrcB;protein_id=WP_011192838.1;transl_table=11 NZ_CPUY01000017.1 RefSeq gene 12788 12967 . - . ID=gene-AD853_RS14970;Name=AD853_RS14970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS14970 NZ_CPUY01000017.1 Protein Homology CDS 12788 12967 . - 0 ID=cds-WP_038824159.1;Parent=gene-AD853_RS14970;Dbxref=GenBank:WP_038824159.1;Name=WP_038824159.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212239.1;locus_tag=AD853_RS14970;product=hypothetical protein;protein_id=WP_038824159.1;transl_table=11 NZ_CPUY01000017.1 RefSeq gene 13740 14057 . + . ID=gene-AD853_RS14975;Name=AD853_RS14975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS14975;old_locus_tag=ERS008462_03030 NZ_CPUY01000017.1 Protein Homology CDS 13740 14057 . + 0 ID=cds-WP_011192837.1;Parent=gene-AD853_RS14975;Dbxref=GenBank:WP_011192837.1;Name=WP_011192837.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212240.1;locus_tag=AD853_RS14975;product=PTS sugar transporter subunit IIB;protein_id=WP_011192837.1;transl_table=11 NZ_CPUY01000017.1 RefSeq gene 14068 15429 . + . ID=gene-AD853_RS14980;Name=chbC;gbkey=Gene;gene=chbC;gene_biotype=protein_coding;locus_tag=AD853_RS14980;old_locus_tag=ERS008462_03031 NZ_CPUY01000017.1 Protein Homology CDS 14068 15429 . + 0 ID=cds-WP_002212241.1;Parent=gene-AD853_RS14980;Dbxref=GenBank:WP_002212241.1;Name=WP_002212241.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;gene=chbC;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416251.1;locus_tag=AD853_RS14980;product=PTS N%2CN'-diacetylchitobiose transporter subunit IIC;protein_id=WP_002212241.1;transl_table=11 NZ_CPUY01000017.1 RefSeq gene 15596 15943 . + . ID=gene-AD853_RS14985;Name=chbA;gbkey=Gene;gene=chbA;gene_biotype=protein_coding;locus_tag=AD853_RS14985;old_locus_tag=ERS008462_03032 NZ_CPUY01000017.1 Protein Homology CDS 15596 15943 . + 0 ID=cds-WP_012104766.1;Parent=gene-AD853_RS14985;Dbxref=GenBank:WP_012104766.1;Name=WP_012104766.1;gbkey=CDS;gene=chbA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012104766.1;locus_tag=AD853_RS14985;product=PTS N%2CN'-diacetylchitobiose transporter subunit IIA;protein_id=WP_012104766.1;transl_table=11 NZ_CPUY01000017.1 RefSeq gene 15980 16822 . + . ID=gene-AD853_RS14990;Name=chbR;gbkey=Gene;gene=chbR;gene_biotype=protein_coding;locus_tag=AD853_RS14990;old_locus_tag=ERS008462_03033 NZ_CPUY01000017.1 Protein Homology CDS 15980 16822 . + 0 ID=cds-WP_002227871.1;Parent=gene-AD853_RS14990;Dbxref=GenBank:WP_002227871.1;Name=WP_002227871.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=chbR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002227871.1;locus_tag=AD853_RS14990;product=transcriptional regulator ChbR;protein_id=WP_002227871.1;transl_table=11 NZ_CPUY01000017.1 RefSeq gene 16874 17635 . + . ID=gene-AD853_RS14995;Name=chbG;gbkey=Gene;gene=chbG;gene_biotype=protein_coding;locus_tag=AD853_RS14995;old_locus_tag=ERS008462_03034 NZ_CPUY01000017.1 Protein Homology CDS 16874 17635 . + 0 ID=cds-WP_038824158.1;Parent=gene-AD853_RS14995;Dbxref=GenBank:WP_038824158.1;Name=WP_038824158.1;Ontology_term=GO:0000272,GO:0016811;gbkey=CDS;gene=chbG;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds%2C in linear amides|0016811||IEA;go_process=polysaccharide catabolic process|0000272||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212244.1;locus_tag=AD853_RS14995;product=chitin disaccharide deacetylase;protein_id=WP_038824158.1;transl_table=11 NZ_CPUY01000017.1 RefSeq gene 17930 18298 . - . ID=gene-AD853_RS15005;Name=AD853_RS15005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS15005;old_locus_tag=ERS008462_03036 NZ_CPUY01000017.1 Protein Homology CDS 17930 18298 . - 0 ID=cds-WP_038824157.1;Parent=gene-AD853_RS15005;Dbxref=GenBank:WP_038824157.1;Name=WP_038824157.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012303771.1;locus_tag=AD853_RS15005;product=lysozyme inhibitor LprI family protein;protein_id=WP_038824157.1;transl_table=11 NZ_CPUY01000017.1 RefSeq gene 18793 19320 . + . ID=gene-AD853_RS15010;Name=seqA;gbkey=Gene;gene=seqA;gene_biotype=protein_coding;locus_tag=AD853_RS15010;old_locus_tag=ERS008462_03037 NZ_CPUY01000017.1 Protein Homology CDS 18793 19320 . + 0 ID=cds-WP_011192836.1;Parent=gene-AD853_RS15010;Dbxref=GenBank:WP_011192836.1;Name=WP_011192836.1;Ontology_term=GO:0032297,GO:0003677;gbkey=CDS;gene=seqA;go_function=DNA binding|0003677||IEA;go_process=negative regulation of DNA-templated DNA replication initiation|0032297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012303772.1;locus_tag=AD853_RS15010;product=replication initiation negative regulator SeqA;protein_id=WP_011192836.1;transl_table=11 NZ_CPUY01000017.1 RefSeq gene 19393 21036 . + . ID=gene-AD853_RS15015;Name=pgm;gbkey=Gene;gene=pgm;gene_biotype=protein_coding;locus_tag=AD853_RS15015;old_locus_tag=ERS008462_03038 NZ_CPUY01000017.1 Protein Homology CDS 19393 21036 . + 0 ID=cds-WP_038824156.1;Parent=gene-AD853_RS15015;Dbxref=GenBank:WP_038824156.1;Name=WP_038824156.1;Ontology_term=GO:0005975,GO:0004614;gbkey=CDS;gene=pgm;go_function=phosphoglucomutase activity|0004614||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012104769.1;locus_tag=AD853_RS15015;product=phosphoglucomutase (alpha-D-glucose-1%2C6-bisphosphate-dependent);protein_id=WP_038824156.1;transl_table=11 NZ_CPUY01000017.1 RefSeq gene 21410 21652 . + . ID=gene-AD853_RS15025;Name=AD853_RS15025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS15025;old_locus_tag=ERS008462_03039 NZ_CPUY01000017.1 Protein Homology CDS 21410 21652 . + 0 ID=cds-WP_002209646.1;Parent=gene-AD853_RS15025;Dbxref=GenBank:WP_002209646.1;Name=WP_002209646.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209646.1;locus_tag=AD853_RS15025;product=hypothetical protein;protein_id=WP_002209646.1;transl_table=11 NZ_CPUY01000017.1 RefSeq gene 21780 22208 . - . ID=gene-AD853_RS15030;Name=AD853_RS15030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS15030;old_locus_tag=ERS008462_03040 NZ_CPUY01000017.1 Protein Homology CDS 21780 22208 . - 0 ID=cds-WP_002209647.1;Parent=gene-AD853_RS15030;Dbxref=GenBank:WP_002209647.1;Name=WP_002209647.1;Ontology_term=GO:0055085,GO:0005215,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=transporter activity|0005215||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004721874.1;locus_tag=AD853_RS15030;product=EamA family transporter;protein_id=WP_002209647.1;transl_table=11 NZ_CPUY01000017.1 RefSeq gene 22303 22989 . - . ID=gene-AD853_RS15035;Name=kdpE;gbkey=Gene;gene=kdpE;gene_biotype=protein_coding;locus_tag=AD853_RS15035;old_locus_tag=ERS008462_03041 NZ_CPUY01000017.1 Protein Homology CDS 22303 22989 . - 0 ID=cds-WP_038824155.1;Parent=gene-AD853_RS15035;Dbxref=GenBank:WP_038824155.1;Name=WP_038824155.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=kdpE;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005167966.1;locus_tag=AD853_RS15035;product=two-component system response regulator KdpE;protein_id=WP_038824155.1;transl_table=11 NZ_CPUY01000017.1 RefSeq pseudogene 23203 25606 . - . ID=gene-AD853_RS15040;Name=AD853_RS15040;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD853_RS15040;old_locus_tag=ERS008462_03042;pseudo=true NZ_CPUY01000017.1 Protein Homology CDS 23203 25606 . - 0 ID=cds-AD853_RS15040;Parent=gene-AD853_RS15040;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016256711.1;locus_tag=AD853_RS15040;product=DUF4118 domain-containing protein;pseudo=true;transl_table=11 NZ_CPUY01000017.1 RefSeq gene 25616 26218 . - . ID=gene-AD853_RS15045;Name=kdpC;gbkey=Gene;gene=kdpC;gene_biotype=protein_coding;locus_tag=AD853_RS15045;old_locus_tag=ERS008462_03044 NZ_CPUY01000017.1 Protein Homology CDS 25616 26218 . - 0 ID=cds-WP_002216363.1;Parent=gene-AD853_RS15045;Dbxref=GenBank:WP_002216363.1;Name=WP_002216363.1;Ontology_term=GO:0006813,GO:0008556,GO:0016020;gbkey=CDS;gene=kdpC;go_component=membrane|0016020||IEA;go_function=P-type potassium transmembrane transporter activity|0008556||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002216363.1;locus_tag=AD853_RS15045;product=potassium-transporting ATPase subunit KdpC;protein_id=WP_002216363.1;transl_table=11 NZ_CPUY01000017.1 RefSeq gene 26430 28496 . - . ID=gene-AD853_RS15050;Name=kdpB;gbkey=Gene;gene=kdpB;gene_biotype=protein_coding;locus_tag=AD853_RS15050;old_locus_tag=ERS008462_03045 NZ_CPUY01000017.1 Protein Homology CDS 26430 28496 . - 0 ID=cds-WP_050124622.1;Parent=gene-AD853_RS15050;Dbxref=GenBank:WP_050124622.1;Name=WP_050124622.1;Ontology_term=GO:0006813,GO:0005524,GO:0008556,GO:0016020,GO:0031004;gbkey=CDS;gene=kdpB;go_component=membrane|0016020||IEA,potassium ion-transporting ATPase complex|0031004||IEA;go_function=ATP binding|0005524||IEA,P-type potassium transmembrane transporter activity|0008556||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192833.1;locus_tag=AD853_RS15050;product=potassium-transporting ATPase subunit KdpB;protein_id=WP_050124622.1;transl_table=11 NZ_CPUY01000017.1 RefSeq gene 28590 30263 . - . ID=gene-AD853_RS15055;Name=kdpA;gbkey=Gene;gene=kdpA;gene_biotype=protein_coding;locus_tag=AD853_RS15055;old_locus_tag=ERS008462_03046 NZ_CPUY01000017.1 Protein Homology CDS 28590 30263 . - 0 ID=cds-WP_038824152.1;Parent=gene-AD853_RS15055;Dbxref=GenBank:WP_038824152.1;Name=WP_038824152.1;Ontology_term=GO:0006813,GO:0008556,GO:0031004;gbkey=CDS;gene=kdpA;go_component=potassium ion-transporting ATPase complex|0031004||IEA;go_function=P-type potassium transmembrane transporter activity|0008556||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012104772.1;locus_tag=AD853_RS15055;product=potassium-transporting ATPase subunit KdpA;protein_id=WP_038824152.1;transl_table=11 NZ_CPUY01000017.1 RefSeq gene 30264 30353 . - . ID=gene-AD853_RS15060;Name=AD853_RS15060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS15060 NZ_CPUY01000017.1 Protein Homology CDS 30264 30353 . - 0 ID=cds-WP_002216016.1;Parent=gene-AD853_RS15060;Dbxref=GenBank:WP_002216016.1;Name=WP_002216016.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR02115.1;locus_tag=AD853_RS15060;product=K(+)-transporting ATPase subunit F;protein_id=WP_002216016.1;transl_table=11 NZ_CPUY01000017.1 RefSeq gene 30350 30592 . - . ID=gene-AD853_RS15065;Name=AD853_RS15065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS15065 NZ_CPUY01000017.1 Protein Homology CDS 30350 30592 . - 0 ID=cds-WP_038824150.1;Parent=gene-AD853_RS15065;Dbxref=GenBank:WP_038824150.1;Name=WP_038824150.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002216017.1;locus_tag=AD853_RS15065;product=hypothetical protein;protein_id=WP_038824150.1;transl_table=11 NZ_CPUY01000017.1 RefSeq gene 30758 30964 . + . ID=gene-AD853_RS15070;Name=AD853_RS15070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS15070;old_locus_tag=ERS008462_03047 NZ_CPUY01000017.1 Protein Homology CDS 30758 30964 . + 0 ID=cds-WP_002209653.1;Parent=gene-AD853_RS15070;Dbxref=GenBank:WP_002209653.1;Name=WP_002209653.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209653.1;locus_tag=AD853_RS15070;product=YbfA family protein;protein_id=WP_002209653.1;transl_table=11 NZ_CPUY01000017.1 RefSeq gene 31319 31801 . + . ID=gene-AD853_RS15075;Name=AD853_RS15075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS15075;old_locus_tag=ERS008462_03048 NZ_CPUY01000017.1 Protein Homology CDS 31319 31801 . + 0 ID=cds-WP_038824149.1;Parent=gene-AD853_RS15075;Dbxref=GenBank:WP_038824149.1;Name=WP_038824149.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209654.1;locus_tag=AD853_RS15075;product=YbgA family protein;protein_id=WP_038824149.1;transl_table=11 NZ_CPUY01000017.1 RefSeq gene 31907 33370 . + . ID=gene-AD853_RS15080;Name=phrB;gbkey=Gene;gene=phrB;gene_biotype=protein_coding;locus_tag=AD853_RS15080;old_locus_tag=ERS008462_03049 NZ_CPUY01000017.1 Protein Homology CDS 31907 33370 . + 0 ID=cds-WP_038824148.1;Parent=gene-AD853_RS15080;Dbxref=GenBank:WP_038824148.1;Name=WP_038824148.1;gbkey=CDS;gene=phrB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002354509.1;locus_tag=AD853_RS15080;product=deoxyribodipyrimidine photo-lyase;protein_id=WP_038824148.1;transl_table=11 NZ_CPUY01000017.1 RefSeq gene 33361 34398 . + . ID=gene-AD853_RS15085;Name=AD853_RS15085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS15085;old_locus_tag=ERS008462_03050 NZ_CPUY01000017.1 Protein Homology CDS 33361 34398 . + 0 ID=cds-WP_002209656.1;Parent=gene-AD853_RS15085;Dbxref=GenBank:WP_002209656.1;Name=WP_002209656.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012229978.1;locus_tag=AD853_RS15085;product=MBL fold metallo-hydrolase;protein_id=WP_002209656.1;transl_table=11 NZ_CPUY01000017.1 RefSeq gene 34507 35250 . + . ID=gene-AD853_RS15090;Name=AD853_RS15090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS15090;old_locus_tag=ERS008462_03051 NZ_CPUY01000017.1 Protein Homology CDS 34507 35250 . + 0 ID=cds-WP_025471060.1;Parent=gene-AD853_RS15090;Dbxref=GenBank:WP_025471060.1;Name=WP_025471060.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002354507.1;locus_tag=AD853_RS15090;product=type 2 GTP cyclohydrolase I;protein_id=WP_025471060.1;transl_table=11 NZ_CPUY01000017.1 RefSeq gene 35335 35490 . - . ID=gene-AD853_RS21865;Name=AD853_RS21865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS21865;old_locus_tag=ERS008462_03052 NZ_CPUY01000017.1 Protein Homology CDS 35335 35490 . - 0 ID=cds-WP_002225777.1;Parent=gene-AD853_RS21865;Dbxref=GenBank:WP_002225777.1;Name=WP_002225777.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002225777.1;locus_tag=AD853_RS21865;product=hypothetical protein;protein_id=WP_002225777.1;transl_table=11 NZ_CPUY01000017.1 RefSeq gene 35869 36525 . + . ID=gene-AD853_RS15095;Name=pxpB;gbkey=Gene;gene=pxpB;gene_biotype=protein_coding;locus_tag=AD853_RS15095;old_locus_tag=ERS008462_03053 NZ_CPUY01000017.1 Protein Homology CDS 35869 36525 . + 0 ID=cds-WP_011192830.1;Parent=gene-AD853_RS15095;Dbxref=GenBank:WP_011192830.1;Name=WP_011192830.1;Ontology_term=GO:0005975,GO:0008152,GO:0017168;gbkey=CDS;gene=pxpB;go_function=5-oxoprolinase (ATP-hydrolyzing) activity|0017168||IEA;go_process=carbohydrate metabolic process|0005975||IEA,metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192830.1;locus_tag=AD853_RS15095;product=5-oxoprolinase subunit PxpB;protein_id=WP_011192830.1;transl_table=11 NZ_CPUY01000017.1 RefSeq pseudogene 36519 37485 . + . ID=gene-AD853_RS15100;Name=pxpC;gbkey=Gene;gene=pxpC;gene_biotype=pseudogene;locus_tag=AD853_RS15100;pseudo=true NZ_CPUY01000017.1 Protein Homology CDS 36519 37485 . + 0 ID=cds-AD853_RS15100;Parent=gene-AD853_RS15100;Note=frameshifted;Ontology_term=GO:0005975,GO:0008152,GO:0017168;gbkey=CDS;gene=pxpC;go_function=5-oxoprolinase (ATP-hydrolyzing) activity|0017168||IEA;go_process=carbohydrate metabolic process|0005975||IEA,metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209658.1;locus_tag=AD853_RS15100;product=5-oxoprolinase subunit PxpC;pseudo=true;transl_table=11 NZ_CPUY01000017.1 RefSeq gene 37482 38219 . + . ID=gene-AD853_RS15105;Name=pxpA;gbkey=Gene;gene=pxpA;gene_biotype=protein_coding;locus_tag=AD853_RS15105;old_locus_tag=ERS008462_03056 NZ_CPUY01000017.1 Protein Homology CDS 37482 38219 . + 0 ID=cds-WP_038824147.1;Parent=gene-AD853_RS15105;Dbxref=GenBank:WP_038824147.1;Name=WP_038824147.1;Ontology_term=GO:0005975,GO:0003824;gbkey=CDS;gene=pxpA;go_function=catalytic activity|0003824||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209659.1;locus_tag=AD853_RS15105;product=5-oxoprolinase subunit PxpA;protein_id=WP_038824147.1;transl_table=11 NZ_CPUY01000017.1 RefSeq pseudogene 38304 39025 . + . ID=gene-AD853_RS15110;Name=AD853_RS15110;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD853_RS15110;old_locus_tag=ERS008462_03057;pseudo=true NZ_CPUY01000017.1 Protein Homology CDS 38304 39025 . + 0 ID=cds-AD853_RS15110;Parent=gene-AD853_RS15110;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004715773.1;locus_tag=AD853_RS15110;product=DUF969 domain-containing protein;pseudo=true;transl_table=11 NZ_CPUY01000017.1 RefSeq gene 39022 40041 . + . ID=gene-AD853_RS15115;Name=AD853_RS15115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS15115;old_locus_tag=ERS008462_03058 NZ_CPUY01000017.1 Protein Homology CDS 39022 40041 . + 0 ID=cds-WP_002209661.1;Parent=gene-AD853_RS15115;Dbxref=GenBank:WP_002209661.1;Name=WP_002209661.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225859.1;locus_tag=AD853_RS15115;product=DUF979 domain-containing protein;protein_id=WP_002209661.1;transl_table=11 NZ_CPUY01000017.1 RefSeq gene 40051 40701 . + . ID=gene-AD853_RS15120;Name=pcp;gbkey=Gene;gene=pcp;gene_biotype=protein_coding;locus_tag=AD853_RS15120;old_locus_tag=ERS008462_03059 NZ_CPUY01000017.1 Protein Homology CDS 40051 40701 . + 0 ID=cds-WP_038824146.1;Parent=gene-AD853_RS15120;Dbxref=GenBank:WP_038824146.1;Name=WP_038824146.1;Ontology_term=GO:0006508,GO:0008234,GO:0016920,GO:0005829;gbkey=CDS;gene=pcp;go_component=cytosol|0005829||IEA;go_function=cysteine-type peptidase activity|0008234||IEA,pyroglutamyl-peptidase activity|0016920||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209662.1;locus_tag=AD853_RS15120;product=pyroglutamyl-peptidase I;protein_id=WP_038824146.1;transl_table=11 NZ_CPUY01000017.1 RefSeq gene 40792 41478 . - . ID=gene-AD853_RS15125;Name=ung;gbkey=Gene;gene=ung;gene_biotype=protein_coding;locus_tag=AD853_RS15125;old_locus_tag=ERS008462_03060 NZ_CPUY01000017.1 Protein Homology CDS 40792 41478 . - 0 ID=cds-WP_002209663.1;Parent=gene-AD853_RS15125;Dbxref=GenBank:WP_002209663.1;Name=WP_002209663.1;Ontology_term=GO:0006284,GO:0004844,GO:0016799;gbkey=CDS;gene=ung;go_function=uracil DNA N-glycosylase activity|0004844||IEA,hydrolase activity%2C hydrolyzing N-glycosyl compounds|0016799||IEA;go_process=base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209663.1;locus_tag=AD853_RS15125;product=uracil-DNA glycosylase;protein_id=WP_002209663.1;transl_table=11 NZ_CPUY01000017.1 RefSeq gene 41831 42214 . + . ID=gene-AD853_RS15130;Name=grcA;gbkey=Gene;gene=grcA;gene_biotype=protein_coding;locus_tag=AD853_RS15130;old_locus_tag=ERS008462_03061 NZ_CPUY01000017.1 Protein Homology CDS 41831 42214 . + 0 ID=cds-WP_002209664.1;Parent=gene-AD853_RS15130;Dbxref=GenBank:WP_002209664.1;Name=WP_002209664.1;Ontology_term=GO:0003824;gbkey=CDS;gene=grcA;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007728348.1;locus_tag=AD853_RS15130;product=autonomous glycyl radical cofactor GrcA;protein_id=WP_002209664.1;transl_table=11 NZ_CPUY01000017.1 RefSeq gene 42393 43355 . + . ID=gene-AD853_RS15135;Name=AD853_RS15135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS15135;old_locus_tag=ERS008462_03062 NZ_CPUY01000017.1 Protein Homology CDS 42393 43355 . + 0 ID=cds-WP_038824145.1;Parent=gene-AD853_RS15135;Dbxref=GenBank:WP_038824145.1;Name=WP_038824145.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012104780.1;locus_tag=AD853_RS15135;product=DUF2974 domain-containing protein;protein_id=WP_038824145.1;transl_table=11 NZ_CPUY01000017.1 RefSeq gene 43433 44089 . + . ID=gene-AD853_RS15145;Name=AD853_RS15145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS15145;old_locus_tag=ERS008462_03064 NZ_CPUY01000017.1 Protein Homology CDS 43433 44089 . + 0 ID=cds-WP_038824144.1;Parent=gene-AD853_RS15145;Dbxref=GenBank:WP_038824144.1;Name=WP_038824144.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209667.1;locus_tag=AD853_RS15145;product=ankyrin repeat domain-containing protein;protein_id=WP_038824144.1;transl_table=11 NZ_CPUY01000017.1 RefSeq gene 44244 45569 . - . ID=gene-AD853_RS15150;Name=srmB;gbkey=Gene;gene=srmB;gene_biotype=protein_coding;locus_tag=AD853_RS15150;old_locus_tag=ERS008462_03066 NZ_CPUY01000017.1 Protein Homology CDS 44244 45569 . - 0 ID=cds-WP_012104783.1;Parent=gene-AD853_RS15150;Dbxref=GenBank:WP_012104783.1;Name=WP_012104783.1;Ontology_term=GO:0000027,GO:0003724;gbkey=CDS;gene=srmB;go_function=RNA helicase activity|0003724||IEA;go_process=ribosomal large subunit assembly|0000027||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004390505.1;locus_tag=AD853_RS15150;product=ATP-dependent RNA helicase SrmB;protein_id=WP_012104783.1;transl_table=11 NZ_CPUY01000017.1 RefSeq gene 45821 46567 . + . ID=gene-AD853_RS15155;Name=trmN;gbkey=Gene;gene=trmN;gene_biotype=protein_coding;locus_tag=AD853_RS15155;old_locus_tag=ERS008462_03067 NZ_CPUY01000017.1 Protein Homology CDS 45821 46567 . + 0 ID=cds-WP_002209670.1;Parent=gene-AD853_RS15155;Dbxref=GenBank:WP_002209670.1;Name=WP_002209670.1;Ontology_term=GO:0030488,GO:0003676,GO:0016430;gbkey=CDS;gene=trmN;go_function=nucleic acid binding|0003676||IEA,tRNA (adenine-N6)-methyltransferase activity|0016430||IEA;go_process=tRNA methylation|0030488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002223364.1;locus_tag=AD853_RS15155;product=tRNA(1)(Val) (adenine(37)-N(6))-methyltransferase TrmN;protein_id=WP_002209670.1;transl_table=11 NZ_CPUY01000017.1 RefSeq gene 46850 48451 . - . ID=gene-AD853_RS15160;Name=nadB;gbkey=Gene;gene=nadB;gene_biotype=protein_coding;locus_tag=AD853_RS15160;old_locus_tag=ERS008462_03068 NZ_CPUY01000017.1 Protein Homology CDS 46850 48451 . - 0 ID=cds-WP_002209671.1;Parent=gene-AD853_RS15160;Dbxref=GenBank:WP_002209671.1;Name=WP_002209671.1;Ontology_term=GO:0009435,GO:0008734;gbkey=CDS;gene=nadB;go_function=L-aspartate oxidase activity|0008734||IEA;go_process=NAD+ biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209671.1;locus_tag=AD853_RS15160;product=L-aspartate oxidase;protein_id=WP_002209671.1;transl_table=11 NZ_CPUY01000017.1 RefSeq gene 48675 49250 . + . ID=gene-AD853_RS15165;Name=rpoE;gbkey=Gene;gene=rpoE;gene_biotype=protein_coding;locus_tag=AD853_RS15165;old_locus_tag=ERS008462_03069 NZ_CPUY01000017.1 Protein Homology CDS 48675 49250 . + 0 ID=cds-WP_002209672.1;Parent=gene-AD853_RS15165;Dbxref=GenBank:WP_002209672.1;Name=WP_002209672.1;Ontology_term=GO:0006352,GO:0006355,GO:0003677,GO:0003700,GO:0016987;gbkey=CDS;gene=rpoE;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461575.1;locus_tag=AD853_RS15165;product=RNA polymerase sigma factor RpoE;protein_id=WP_002209672.1;transl_table=11 NZ_CPUY01000017.1 RefSeq gene 49276 49932 . + . ID=gene-AD853_RS15170;Name=rseA;gbkey=Gene;gene=rseA;gene_biotype=protein_coding;locus_tag=AD853_RS15170;old_locus_tag=ERS008462_03070 NZ_CPUY01000017.1 Protein Homology CDS 49276 49932 . + 0 ID=cds-WP_033847743.1;Parent=gene-AD853_RS15170;Dbxref=GenBank:WP_033847743.1;Name=WP_033847743.1;Ontology_term=GO:0016989;gbkey=CDS;gene=rseA;go_function=sigma factor antagonist activity|0016989||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005172760.1;locus_tag=AD853_RS15170;product=anti-sigma-E factor RseA;protein_id=WP_033847743.1;transl_table=11 NZ_CPUY01000017.1 RefSeq gene 49932 50888 . + . ID=gene-AD853_RS15175;Name=rseB;gbkey=Gene;gene=rseB;gene_biotype=protein_coding;locus_tag=AD853_RS15175;old_locus_tag=ERS008462_03071 NZ_CPUY01000017.1 Protein Homology CDS 49932 50888 . + 0 ID=cds-WP_002209674.1;Parent=gene-AD853_RS15175;Dbxref=GenBank:WP_002209674.1;Name=WP_002209674.1;gbkey=CDS;gene=rseB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209674.1;locus_tag=AD853_RS15175;product=sigma-E factor regulatory protein RseB;protein_id=WP_002209674.1;transl_table=11 NZ_CPUY01000017.1 RefSeq gene 50885 51340 . + . ID=gene-AD853_RS15180;Name=rseC;gbkey=Gene;gene=rseC;gene_biotype=protein_coding;locus_tag=AD853_RS15180;old_locus_tag=ERS008462_03072 NZ_CPUY01000017.1 Protein Homology CDS 50885 51340 . + 0 ID=cds-WP_002209675.1;Parent=gene-AD853_RS15180;Dbxref=GenBank:WP_002209675.1;Name=WP_002209675.1;gbkey=CDS;gene=rseC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209675.1;locus_tag=AD853_RS15180;product=SoxR-reducing system protein RseC;protein_id=WP_002209675.1;transl_table=11 NZ_CPUY01000017.1 RefSeq gene 51361 52215 . - . ID=gene-AD853_RS15185;Name=AD853_RS15185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS15185;old_locus_tag=ERS008462_03073 NZ_CPUY01000017.1 Protein Homology CDS 51361 52215 . - 0 ID=cds-WP_002209676.1;Parent=gene-AD853_RS15185;Dbxref=GenBank:WP_002209676.1;Name=WP_002209676.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209676.1;locus_tag=AD853_RS15185;product=hypothetical protein;protein_id=WP_002209676.1;transl_table=11 NZ_CPUY01000017.1 RefSeq gene 52715 54514 . + . ID=gene-AD853_RS15190;Name=lepA;gbkey=Gene;gene=lepA;gene_biotype=protein_coding;locus_tag=AD853_RS15190;old_locus_tag=ERS008462_03074 NZ_CPUY01000017.1 Protein Homology CDS 52715 54514 . + 0 ID=cds-WP_002209677.1;Parent=gene-AD853_RS15190;Dbxref=GenBank:WP_002209677.1;Name=WP_002209677.1;Ontology_term=GO:0003924,GO:0005525;gbkey=CDS;gene=lepA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009088658.1;locus_tag=AD853_RS15190;product=translation elongation factor 4;protein_id=WP_002209677.1;transl_table=11 NZ_CPUY01000017.1 RefSeq gene 54524 55522 . + . ID=gene-AD853_RS15195;Name=lepB;gbkey=Gene;gene=lepB;gene_biotype=protein_coding;locus_tag=AD853_RS15195;old_locus_tag=ERS008462_03075 NZ_CPUY01000017.1 Protein Homology CDS 54524 55522 . + 0 ID=cds-WP_002209678.1;Parent=gene-AD853_RS15195;Dbxref=GenBank:WP_002209678.1;Name=WP_002209678.1;Ontology_term=GO:0006465,GO:0004252;gbkey=CDS;gene=lepB;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=signal peptide processing|0006465||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005159411.1;locus_tag=AD853_RS15195;product=signal peptidase I;protein_id=WP_002209678.1;transl_table=11 NZ_CPUY01000017.1 RefSeq gene 55874 56554 . + . ID=gene-AD853_RS15200;Name=rnc;gbkey=Gene;gene=rnc;gene_biotype=protein_coding;locus_tag=AD853_RS15200 NZ_CPUY01000017.1 Protein Homology CDS 55874 56554 . + 0 ID=cds-WP_002209679.1;Parent=gene-AD853_RS15200;Dbxref=GenBank:WP_002209679.1;Name=WP_002209679.1;Ontology_term=GO:0006364,GO:0006396,GO:0003723,GO:0004525;gbkey=CDS;gene=rnc;go_function=RNA binding|0003723||IEA,ribonuclease III activity|0004525||IEA;go_process=rRNA processing|0006364||IEA,RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015960048.1;locus_tag=AD853_RS15200;product=ribonuclease III;protein_id=WP_002209679.1;transl_table=11 NZ_CPUY01000017.1 RefSeq gene 56551 57462 . + . ID=gene-AD853_RS15205;Name=era;gbkey=Gene;gene=era;gene_biotype=protein_coding;locus_tag=AD853_RS15205;old_locus_tag=ERS008462_03077 NZ_CPUY01000017.1 Protein Homology CDS 56551 57462 . + 0 ID=cds-WP_002214829.1;Parent=gene-AD853_RS15205;Dbxref=GenBank:WP_002214829.1;Name=WP_002214829.1;Ontology_term=GO:0003723,GO:0005525;gbkey=CDS;gene=era;go_function=RNA binding|0003723||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002214829.1;locus_tag=AD853_RS15205;product=GTPase Era;protein_id=WP_002214829.1;transl_table=11 NZ_CPUY01000017.1 RefSeq gene 57472 58197 . + . ID=gene-AD853_RS15210;Name=recO;gbkey=Gene;gene=recO;gene_biotype=protein_coding;locus_tag=AD853_RS15210;old_locus_tag=ERS008462_03078 NZ_CPUY01000017.1 Protein Homology CDS 57472 58197 . + 0 ID=cds-WP_002209680.1;Parent=gene-AD853_RS15210;Dbxref=GenBank:WP_002209680.1;Name=WP_002209680.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677;gbkey=CDS;gene=recO;go_function=DNA binding|0003677||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209680.1;locus_tag=AD853_RS15210;product=DNA repair protein RecO;protein_id=WP_002209680.1;transl_table=11 NZ_CPUY01000017.1 RefSeq gene 58356 59087 . + . ID=gene-AD853_RS15215;Name=pdxJ;gbkey=Gene;gene=pdxJ;gene_biotype=protein_coding;locus_tag=AD853_RS15215;old_locus_tag=ERS008462_03079 NZ_CPUY01000017.1 Protein Homology CDS 58356 59087 . + 0 ID=cds-WP_012104785.1;Parent=gene-AD853_RS15215;Dbxref=GenBank:WP_012104785.1;Name=WP_012104785.1;Ontology_term=GO:0008615,GO:0033856;gbkey=CDS;gene=pdxJ;go_function=pyridoxine 5'-phosphate synthase activity|0033856||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192826.1;locus_tag=AD853_RS15215;product=pyridoxine 5'-phosphate synthase;protein_id=WP_012104785.1;transl_table=11 NZ_CPUY01000017.1 RefSeq gene 59087 59467 . + . ID=gene-AD853_RS15220;Name=acpS;gbkey=Gene;gene=acpS;gene_biotype=protein_coding;locus_tag=AD853_RS15220;old_locus_tag=ERS008462_03080 NZ_CPUY01000017.1 Protein Homology CDS 59087 59467 . + 0 ID=cds-WP_011192825.1;Parent=gene-AD853_RS15220;Dbxref=GenBank:WP_011192825.1;Name=WP_011192825.1;Ontology_term=GO:0008610,GO:0008897;gbkey=CDS;gene=acpS;go_function=holo-[acyl-carrier-protein] synthase activity|0008897||IEA;go_process=lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005172734.1;locus_tag=AD853_RS15220;product=holo-ACP synthase;protein_id=WP_011192825.1;transl_table=11 NZ_CPUY01000017.1 RefSeq gene 59573 59833 . - . ID=gene-AD853_RS15225;Name=AD853_RS15225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS15225;old_locus_tag=ERS008462_03081 NZ_CPUY01000017.1 Protein Homology CDS 59573 59833 . - 0 ID=cds-WP_002211567.1;Parent=gene-AD853_RS15225;Dbxref=GenBank:WP_002211567.1;Name=WP_002211567.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417057.1;locus_tag=AD853_RS15225;product=YfhL family 4Fe-4S dicluster ferredoxin;protein_id=WP_002211567.1;transl_table=11 NZ_CPUY01000017.1 RefSeq gene 59995 60834 . - . ID=gene-AD853_RS15230;Name=AD853_RS15230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS15230;old_locus_tag=ERS008462_03082 NZ_CPUY01000017.1 Protein Homology CDS 59995 60834 . - 0 ID=cds-WP_002211566.1;Parent=gene-AD853_RS15230;Dbxref=GenBank:WP_002211566.1;Name=WP_002211566.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211566.1;locus_tag=AD853_RS15230;product=MurR/RpiR family transcriptional regulator;protein_id=WP_002211566.1;transl_table=11 NZ_CPUY01000017.1 RefSeq gene 61042 61929 . + . ID=gene-AD853_RS15235;Name=murQ;gbkey=Gene;gene=murQ;gene_biotype=protein_coding;locus_tag=AD853_RS15235;old_locus_tag=ERS008462_03083 NZ_CPUY01000017.1 Protein Homology CDS 61042 61929 . + 0 ID=cds-WP_002211565.1;Parent=gene-AD853_RS15235;Dbxref=GenBank:WP_002211565.1;Name=WP_002211565.1;Ontology_term=GO:0009254,GO:0046348,GO:0016835;gbkey=CDS;gene=murQ;go_function=carbon-oxygen lyase activity|0016835||IEA;go_process=peptidoglycan turnover|0009254||IEA,amino sugar catabolic process|0046348||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013650304.1;locus_tag=AD853_RS15235;product=N-acetylmuramic acid 6-phosphate etherase;protein_id=WP_002211565.1;transl_table=11 NZ_CPUY01000017.1 RefSeq gene 62156 62851 . + . ID=gene-AD853_RS15240;Name=yfhb;gbkey=Gene;gene=yfhb;gene_biotype=protein_coding;locus_tag=AD853_RS15240;old_locus_tag=ERS008462_03084 NZ_CPUY01000017.1 Protein Homology CDS 62156 62851 . + 0 ID=cds-WP_038401214.1;Parent=gene-AD853_RS15240;Dbxref=GenBank:WP_038401214.1;Name=WP_038401214.1;Ontology_term=GO:0016787;gbkey=CDS;gene=yfhb;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211564.1;locus_tag=AD853_RS15240;product=phosphatidylglycerophosphatase C;protein_id=WP_038401214.1;transl_table=11 NZ_CPUY01000017.1 RefSeq gene 62922 63524 . + . ID=gene-AD853_RS15245;Name=tadA;gbkey=Gene;gene=tadA;gene_biotype=protein_coding;locus_tag=AD853_RS15245;old_locus_tag=ERS008462_03085 NZ_CPUY01000017.1 Protein Homology CDS 62922 63524 . + 0 ID=cds-WP_038401217.1;Parent=gene-AD853_RS15245;Dbxref=GenBank:WP_038401217.1;Name=WP_038401217.1;Ontology_term=GO:0002100,GO:0008251,GO:0008270;gbkey=CDS;gene=tadA;go_function=tRNA-specific adenosine deaminase activity|0008251||IEA,zinc ion binding|0008270||IEA;go_process=tRNA wobble adenosine to inosine editing|0002100||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211563.1;locus_tag=AD853_RS15245;product=tRNA adenosine(34) deaminase TadA;protein_id=WP_038401217.1;transl_table=11 NZ_CPUY01000017.1 RefSeq gene 63651 65111 . - . ID=gene-AD853_RS15250;Name=mltF;gbkey=Gene;gene=mltF;gene_biotype=protein_coding;locus_tag=AD853_RS15250;old_locus_tag=ERS008462_03086 NZ_CPUY01000017.1 Protein Homology CDS 63651 65111 . - 0 ID=cds-WP_002211562.1;Parent=gene-AD853_RS15250;Dbxref=GenBank:WP_002211562.1;Name=WP_002211562.1;Ontology_term=GO:0000270,GO:0008933,GO:0016020;gbkey=CDS;gene=mltF;go_component=membrane|0016020||IEA;go_function=peptidoglycan lytic transglycosylase activity|0008933||IEA;go_process=peptidoglycan metabolic process|0000270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005172712.1;locus_tag=AD853_RS15250;product=membrane-bound lytic murein transglycosylase MltF;protein_id=WP_002211562.1;transl_table=11 NZ_CPUY01000017.1 RefSeq gene 65427 69317 . + . ID=gene-AD853_RS15255;Name=purL;gbkey=Gene;gene=purL;gene_biotype=protein_coding;gene_synonym=purI;locus_tag=AD853_RS15255;old_locus_tag=ERS008462_03087 NZ_CPUY01000017.1 Protein Homology CDS 65427 69317 . + 0 ID=cds-WP_011192822.1;Parent=gene-AD853_RS15255;Dbxref=GenBank:WP_011192822.1;Name=WP_011192822.1;Ontology_term=GO:0004642;gbkey=CDS;gene=purL;go_function=phosphoribosylformylglycinamidine synthase activity|0004642||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019083727.1;locus_tag=AD853_RS15255;product=phosphoribosylformylglycinamidine synthase;protein_id=WP_011192822.1;transl_table=11 NZ_CPUY01000017.1 RefSeq gene 69423 69653 . - . ID=gene-AD853_RS22280;Name=AD853_RS22280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS22280 NZ_CPUY01000017.1 GeneMarkS-2+ CDS 69423 69653 . - 0 ID=cds-WP_051048368.1;Parent=gene-AD853_RS22280;Dbxref=GenBank:WP_051048368.1;Name=WP_051048368.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AD853_RS22280;product=hypothetical protein;protein_id=WP_051048368.1;transl_table=11 NZ_CPUY01000017.1 RefSeq gene 70410 70970 . - . ID=gene-AD853_RS15265;Name=AD853_RS15265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS15265;old_locus_tag=ERS008462_03089 NZ_CPUY01000017.1 Protein Homology CDS 70410 70970 . - 0 ID=cds-WP_038825129.1;Parent=gene-AD853_RS15265;Dbxref=GenBank:WP_038825129.1;Name=WP_038825129.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211559.1;locus_tag=AD853_RS15265;product=hypothetical protein;protein_id=WP_038825129.1;transl_table=11 NZ_CPUY01000017.1 RefSeq gene 72165 73601 . + . ID=gene-AD853_RS15270;Name=AD853_RS15270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS15270;old_locus_tag=ERS008462_03092 NZ_CPUY01000017.1 Protein Homology CDS 72165 73601 . + 0 ID=cds-WP_002216114.1;Parent=gene-AD853_RS15270;Dbxref=GenBank:WP_002216114.1;Name=WP_002216114.1;Ontology_term=GO:0007165,GO:0000155,GO:0004673,GO:0005524;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192820.1;locus_tag=AD853_RS15270;product=sensor histidine kinase;protein_id=WP_002216114.1;transl_table=11 NZ_CPUY01000017.1 RefSeq gene 73620 74672 . + . ID=gene-AD853_RS15275;Name=qseG;gbkey=Gene;gene=qseG;gene_biotype=protein_coding;locus_tag=AD853_RS15275;old_locus_tag=ERS008462_03093 NZ_CPUY01000017.1 Protein Homology CDS 73620 74672 . + 0 ID=cds-WP_268989589.1;Parent=gene-AD853_RS15275;Dbxref=GenBank:WP_268989589.1;Name=WP_268989589.1;gbkey=CDS;gene=qseG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014609429.1;locus_tag=AD853_RS15275;product=two-component system QseEF-associated lipoprotein QseG;protein_id=WP_268989589.1;transl_table=11 NZ_CPUY01000017.1 RefSeq gene 74635 75972 . + . ID=gene-AD853_RS15280;Name=glrR;gbkey=Gene;gene=glrR;gene_biotype=protein_coding;locus_tag=AD853_RS15280;old_locus_tag=ERS008462_03094 NZ_CPUY01000017.1 Protein Homology CDS 74635 75972 . + 0 ID=cds-WP_002211556.1;Parent=gene-AD853_RS15280;Dbxref=GenBank:WP_002211556.1;Name=WP_002211556.1;Ontology_term=GO:0000160,GO:0006355,GO:0005524,GO:0008134;gbkey=CDS;gene=glrR;go_function=ATP binding|0005524||IEA,transcription factor binding|0008134||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002216116.1;locus_tag=AD853_RS15280;product=two-component system response regulator GlrR;protein_id=WP_002211556.1;transl_table=11 NZ_CPUY01000017.1 RefSeq gene 76132 77754 . + . ID=gene-AD853_RS15285;Name=AD853_RS15285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS15285;old_locus_tag=ERS008462_03095 NZ_CPUY01000017.1 Protein Homology CDS 76132 77754 . + 0 ID=cds-WP_002211555.1;Parent=gene-AD853_RS15285;Dbxref=GenBank:WP_002211555.1;Name=WP_002211555.1;Ontology_term=GO:0009435,GO:0003952,GO:0005524;gbkey=CDS;go_function=NAD+ synthase (glutamine-hydrolyzing) activity|0003952||IEA,ATP binding|0005524||IEA;go_process=NAD+ biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211555.1;locus_tag=AD853_RS15285;product=NAD+ synthase;protein_id=WP_002211555.1;transl_table=11 NZ_CPUY01000017.1 RefSeq gene 77769 78107 . + . ID=gene-AD853_RS15290;Name=glnB;gbkey=Gene;gene=glnB;gene_biotype=protein_coding;locus_tag=AD853_RS15290;old_locus_tag=ERS008462_03096 NZ_CPUY01000017.1 Protein Homology CDS 77769 78107 . + 0 ID=cds-WP_002231018.1;Parent=gene-AD853_RS15290;Dbxref=GenBank:WP_002231018.1;Name=WP_002231018.1;gbkey=CDS;gene=glnB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311446.1;locus_tag=AD853_RS15290;product=nitrogen regulatory protein P-II;protein_id=WP_002231018.1;transl_table=11 NZ_CPUY01000017.1 RefSeq gene 78290 79189 . - . ID=gene-AD853_RS15295;Name=yhfZ;gbkey=Gene;gene=yhfZ;gene_biotype=protein_coding;locus_tag=AD853_RS15295;old_locus_tag=ERS008462_03097 NZ_CPUY01000017.1 Protein Homology CDS 78290 79189 . - 0 ID=cds-WP_038825127.1;Parent=gene-AD853_RS15295;Dbxref=GenBank:WP_038825127.1;Name=WP_038825127.1;gbkey=CDS;gene=yhfZ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019081838.1;locus_tag=AD853_RS15295;product=GntR family transcriptional regulator YhfZ;protein_id=WP_038825127.1;transl_table=11 NZ_CPUY01000017.1 RefSeq gene 79653 80843 . - . ID=gene-AD853_RS15300;Name=hmpA;gbkey=Gene;gene=hmpA;gene_biotype=protein_coding;locus_tag=AD853_RS15300;old_locus_tag=ERS008462_03098 NZ_CPUY01000017.1 Protein Homology CDS 79653 80843 . - 0 ID=cds-WP_038825125.1;Parent=gene-AD853_RS15300;Dbxref=GenBank:WP_038825125.1;Name=WP_038825125.1;Ontology_term=GO:0051409,GO:0008941,GO:0019825,GO:0020037,GO:0071949;gbkey=CDS;gene=hmpA;go_function=nitric oxide dioxygenase NAD(P)H activity|0008941||IEA,oxygen binding|0019825||IEA,heme binding|0020037||IEA,FAD binding|0071949||IEA;go_process=response to nitrosative stress|0051409||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005172672.1;locus_tag=AD853_RS15300;product=NO-inducible flavohemoprotein;protein_id=WP_038825125.1;transl_table=11 NZ_CPUY01000017.1 RefSeq gene 81384 82637 . + . ID=gene-AD853_RS15305;Name=glyA;gbkey=Gene;gene=glyA;gene_biotype=protein_coding;locus_tag=AD853_RS15305;old_locus_tag=ERS008462_03099 NZ_CPUY01000017.1 Protein Homology CDS 81384 82637 . + 0 ID=cds-WP_002211552.1;Parent=gene-AD853_RS15305;Dbxref=GenBank:WP_002211552.1;Name=WP_002211552.1;Ontology_term=GO:0019264,GO:0004372,GO:0008270,GO:0030170,GO:0070905;gbkey=CDS;gene=glyA;go_function=glycine hydroxymethyltransferase activity|0004372||IEA,zinc ion binding|0008270||IEA,pyridoxal phosphate binding|0030170||IEA,serine binding|0070905||IEA;go_process=glycine biosynthetic process from serine|0019264||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019077397.1;locus_tag=AD853_RS15305;product=serine hydroxymethyltransferase;protein_id=WP_002211552.1;transl_table=11 NZ_CPUY01000017.1 RefSeq gene 82789 82971 . + . ID=gene-AD853_RS15310;Name=AD853_RS15310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS15310 NZ_CPUY01000017.1 Protein Homology CDS 82789 82971 . + 0 ID=cds-WP_002223388.1;Parent=gene-AD853_RS15310;Dbxref=GenBank:WP_002223388.1;Name=WP_002223388.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002223388.1;locus_tag=AD853_RS15310;product=hypothetical protein;protein_id=WP_002223388.1;transl_table=11 NZ_CPUY01000017.1 RefSeq gene 83080 83628 . + . ID=gene-AD853_RS15315;Name=ail;gbkey=Gene;gene=ail;gene_biotype=protein_coding;gene_synonym=ompX;locus_tag=AD853_RS15315;old_locus_tag=ERS008462_03100 NZ_CPUY01000017.1 Protein Homology CDS 83080 83628 . + 0 ID=cds-WP_011192817.1;Parent=gene-AD853_RS15315;Dbxref=GenBank:WP_011192817.1;Name=WP_011192817.1;gbkey=CDS;gene=ail;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002227864.1;locus_tag=AD853_RS15315;product=attachment invasion locus protein Ail;protein_id=WP_011192817.1;transl_table=11 NZ_CPUY01000017.1 RefSeq gene 83980 85137 . + . ID=gene-AD853_RS15320;Name=AD853_RS15320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS15320;old_locus_tag=ERS008462_03101 NZ_CPUY01000017.1 Protein Homology CDS 83980 85137 . + 0 ID=cds-WP_038825124.1;Parent=gene-AD853_RS15320;Dbxref=GenBank:WP_038825124.1;Name=WP_038825124.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011906330.1;locus_tag=AD853_RS15320;product=3-phenylpropionate MFS transporter;protein_id=WP_038825124.1;transl_table=11 NZ_CPUY01000017.1 RefSeq gene 85134 86480 . - . ID=gene-AD853_RS15325;Name=csiE;gbkey=Gene;gene=csiE;gene_biotype=protein_coding;locus_tag=AD853_RS15325;old_locus_tag=ERS008462_03102 NZ_CPUY01000017.1 Protein Homology CDS 85134 86480 . - 0 ID=cds-WP_002264608.1;Parent=gene-AD853_RS15325;Dbxref=GenBank:WP_002264608.1;Name=WP_002264608.1;gbkey=CDS;gene=csiE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012413861.1;locus_tag=AD853_RS15325;product=stationary phase inducible protein CsiE;protein_id=WP_002264608.1;transl_table=11 NZ_CPUY01000017.1 RefSeq gene 86622 87296 . + . ID=gene-AD853_RS15330;Name=AD853_RS15330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS15330;old_locus_tag=ERS008462_03103 NZ_CPUY01000017.1 Protein Homology CDS 86622 87296 . + 0 ID=cds-WP_002213310.1;Parent=gene-AD853_RS15330;Dbxref=GenBank:WP_002213310.1;Name=WP_002213310.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192815.1;locus_tag=AD853_RS15330;product=DUF1007 family protein;protein_id=WP_002213310.1;transl_table=11 NZ_CPUY01000017.1 RefSeq gene 87287 88309 . + . ID=gene-AD853_RS15335;Name=AD853_RS15335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS15335;old_locus_tag=ERS008462_03104 NZ_CPUY01000017.1 Protein Homology CDS 87287 88309 . + 0 ID=cds-WP_002213308.1;Parent=gene-AD853_RS15335;Dbxref=GenBank:WP_002213308.1;Name=WP_002213308.1;Ontology_term=GO:0035444,GO:0015099,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=nickel cation transmembrane transporter activity|0015099||IEA;go_process=nickel cation transmembrane transport|0035444||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012413859.1;locus_tag=AD853_RS15335;product=nickel/cobalt transporter;protein_id=WP_002213308.1;transl_table=11 NZ_CPUY01000017.1 RefSeq gene 88408 89211 . - . ID=gene-AD853_RS15340;Name=suhB;gbkey=Gene;gene=suhB;gene_biotype=protein_coding;locus_tag=AD853_RS15340;old_locus_tag=ERS008462_03105 NZ_CPUY01000017.1 Protein Homology CDS 88408 89211 . - 0 ID=cds-WP_002213305.1;Parent=gene-AD853_RS15340;Dbxref=GenBank:WP_002213305.1;Name=WP_002213305.1;Ontology_term=GO:0046854,GO:0008934;gbkey=CDS;gene=suhB;go_function=inositol monophosphate 1-phosphatase activity|0008934||IEA;go_process=phosphatidylinositol phosphate biosynthetic process|0046854||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311426.1;locus_tag=AD853_RS15340;product=inositol-1-monophosphatase;protein_id=WP_002213305.1;transl_table=11 NZ_CPUY01000017.1 RefSeq gene 89330 90103 . + . ID=gene-AD853_RS15345;Name=trmJ;gbkey=Gene;gene=trmJ;gene_biotype=protein_coding;locus_tag=AD853_RS15345;old_locus_tag=ERS008462_03106 NZ_CPUY01000017.1 Protein Homology CDS 89330 90103 . + 0 ID=cds-WP_002217034.1;Parent=gene-AD853_RS15345;Dbxref=GenBank:WP_002217034.1;Name=WP_002217034.1;Ontology_term=GO:0006396,GO:0003723,GO:0008173;gbkey=CDS;gene=trmJ;go_function=RNA binding|0003723||IEA,RNA methyltransferase activity|0008173||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012303843.1;locus_tag=AD853_RS15345;product=tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ;protein_id=WP_002217034.1;transl_table=11 NZ_CPUY01000017.1 RefSeq gene 90259 90753 . + . ID=gene-AD853_RS15350;Name=iscR;gbkey=Gene;gene=iscR;gene_biotype=protein_coding;locus_tag=AD853_RS15350;old_locus_tag=ERS008462_03107 NZ_CPUY01000017.1 Protein Homology CDS 90259 90753 . + 0 ID=cds-WP_002222202.1;Parent=gene-AD853_RS15350;Dbxref=GenBank:WP_002222202.1;Name=WP_002222202.1;gbkey=CDS;gene=iscR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009638942.1;locus_tag=AD853_RS15350;product=Fe-S cluster assembly transcriptional regulator IscR;protein_id=WP_002222202.1;transl_table=11 NZ_CPUY01000017.1 RefSeq gene 90807 92036 . + . ID=gene-AD853_RS15355;Name=AD853_RS15355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS15355;old_locus_tag=ERS008462_03108 NZ_CPUY01000017.1 Protein Homology CDS 90807 92036 . + 0 ID=cds-WP_011192814.1;Parent=gene-AD853_RS15355;Dbxref=GenBank:WP_011192814.1;Name=WP_011192814.1;Ontology_term=GO:0044571,GO:0030170,GO:0031071;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA,cysteine desulfurase activity|0031071||IEA;go_process=[2Fe-2S] cluster assembly|0044571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017459011.1;locus_tag=AD853_RS15355;product=IscS subfamily cysteine desulfurase;protein_id=WP_011192814.1;transl_table=11 NZ_CPUY01000017.1 RefSeq gene 92067 92453 . + . ID=gene-AD853_RS15360;Name=iscU;gbkey=Gene;gene=iscU;gene_biotype=protein_coding;locus_tag=AD853_RS15360;old_locus_tag=ERS008462_03109 NZ_CPUY01000017.1 Protein Homology CDS 92067 92453 . + 0 ID=cds-WP_002209835.1;Parent=gene-AD853_RS15360;Dbxref=GenBank:WP_002209835.1;Name=WP_002209835.1;Ontology_term=GO:0016226,GO:0005198,GO:0005506,GO:0051536;gbkey=CDS;gene=iscU;go_function=structural molecule activity|0005198||IEA,iron ion binding|0005506||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209835.1;locus_tag=AD853_RS15360;product=Fe-S cluster assembly scaffold IscU;protein_id=WP_002209835.1;transl_table=11 NZ_CPUY01000017.1 RefSeq gene 92723 93046 . + . ID=gene-AD853_RS15365;Name=iscA;gbkey=Gene;gene=iscA;gene_biotype=protein_coding;locus_tag=AD853_RS15365;old_locus_tag=ERS008462_03110 NZ_CPUY01000017.1 Protein Homology CDS 92723 93046 . + 0 ID=cds-WP_002209834.1;Parent=gene-AD853_RS15365;Dbxref=GenBank:WP_002209834.1;Name=WP_002209834.1;gbkey=CDS;gene=iscA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228231.1;locus_tag=AD853_RS15365;product=iron-sulfur cluster assembly protein IscA;protein_id=WP_002209834.1;transl_table=11 NZ_CPUY01000017.1 RefSeq gene 93157 93681 . + . ID=gene-AD853_RS15370;Name=hscB;gbkey=Gene;gene=hscB;gene_biotype=protein_coding;locus_tag=AD853_RS15370;old_locus_tag=ERS008462_03111 NZ_CPUY01000017.1 Protein Homology CDS 93157 93681 . + 0 ID=cds-WP_002209833.1;Parent=gene-AD853_RS15370;Dbxref=GenBank:WP_002209833.1;Name=WP_002209833.1;Ontology_term=GO:0051604,GO:0051087;gbkey=CDS;gene=hscB;go_function=protein-folding chaperone binding|0051087||IEA;go_process=protein maturation|0051604||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004713941.1;locus_tag=AD853_RS15370;product=co-chaperone HscB;protein_id=WP_002209833.1;transl_table=11 NZ_CPUY01000017.1 RefSeq gene 93924 95840 . + . ID=gene-AD853_RS15375;Name=hscA;gbkey=Gene;gene=hscA;gene_biotype=protein_coding;locus_tag=AD853_RS15375;old_locus_tag=ERS008462_03112 NZ_CPUY01000017.1 Protein Homology CDS 93924 95840 . + 0 ID=cds-WP_038825123.1;Parent=gene-AD853_RS15375;Dbxref=GenBank:WP_038825123.1;Name=WP_038825123.1;Ontology_term=GO:0006457,GO:0016226,GO:0005515,GO:0005524,GO:0016887;gbkey=CDS;gene=hscA;go_function=protein binding|0005515||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein folding|0006457||IEA,iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004707906.1;locus_tag=AD853_RS15375;product=Fe-S protein assembly chaperone HscA;protein_id=WP_038825123.1;transl_table=11 NZ_CPUY01000017.1 RefSeq gene 95843 96178 . + . ID=gene-AD853_RS15380;Name=fdx;gbkey=Gene;gene=fdx;gene_biotype=protein_coding;locus_tag=AD853_RS15380;old_locus_tag=ERS008462_03113 NZ_CPUY01000017.1 Protein Homology CDS 95843 96178 . + 0 ID=cds-WP_002209831.1;Parent=gene-AD853_RS15380;Dbxref=GenBank:WP_002209831.1;Name=WP_002209831.1;Ontology_term=GO:0016226,GO:0009055,GO:0051537;gbkey=CDS;gene=fdx;go_function=electron transfer activity|0009055||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015683702.1;locus_tag=AD853_RS15380;product=ISC system 2Fe-2S type ferredoxin;protein_id=WP_002209831.1;transl_table=11 NZ_CPUY01000017.1 RefSeq gene 96208 96408 . + . ID=gene-AD853_RS15385;Name=iscX;gbkey=Gene;gene=iscX;gene_biotype=protein_coding;locus_tag=AD853_RS15385;old_locus_tag=ERS008462_03114 NZ_CPUY01000017.1 Protein Homology CDS 96208 96408 . + 0 ID=cds-WP_002209830.1;Parent=gene-AD853_RS15385;Dbxref=GenBank:WP_002209830.1;Name=WP_002209830.1;Ontology_term=GO:0016226,GO:0005506;gbkey=CDS;gene=iscX;go_function=iron ion binding|0005506||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004702435.1;locus_tag=AD853_RS15385;product=Fe-S cluster assembly protein IscX;protein_id=WP_002209830.1;transl_table=11 NZ_CPUY01000017.1 RefSeq gene 96548 97846 . + . ID=gene-AD853_RS15390;Name=pepB;gbkey=Gene;gene=pepB;gene_biotype=protein_coding;locus_tag=AD853_RS15390;old_locus_tag=ERS008462_03115 NZ_CPUY01000017.1 Protein Homology CDS 96548 97846 . + 0 ID=cds-WP_050124623.1;Parent=gene-AD853_RS15390;Dbxref=GenBank:WP_050124623.1;Name=WP_050124623.1;Ontology_term=GO:0006508,GO:0019538,GO:0030145,GO:0070006;gbkey=CDS;gene=pepB;go_function=manganese ion binding|0030145||IEA,metalloaminopeptidase activity|0070006||IEA;go_process=proteolysis|0006508||IEA,protein metabolic process|0019538||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012104798.1;locus_tag=AD853_RS15390;product=aminopeptidase PepB;protein_id=WP_050124623.1;transl_table=11 NZ_CPUY01000017.1 RefSeq gene 97925 98842 . + . ID=gene-AD853_RS15395;Name=sseB;gbkey=Gene;gene=sseB;gene_biotype=protein_coding;locus_tag=AD853_RS15395;old_locus_tag=ERS008462_03116 NZ_CPUY01000017.1 Protein Homology CDS 97925 98842 . + 0 ID=cds-WP_012104799.1;Parent=gene-AD853_RS15395;Dbxref=GenBank:WP_012104799.1;Name=WP_012104799.1;gbkey=CDS;gene=sseB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016584813.1;locus_tag=AD853_RS15395;product=enhanced serine sensitivity protein SseB;protein_id=WP_012104799.1;transl_table=11 NZ_CPUY01000017.1 RefSeq gene 98927 99464 . - . ID=gene-AD853_RS20840;Name=AD853_RS20840;end_range=99464,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS20840;old_locus_tag=ERS008462_03117;partial=true NZ_CPUY01000017.1 Protein Homology CDS 98927 99464 . - 1 ID=cds-WP_155406233.1;Parent=gene-AD853_RS20840;Dbxref=GenBank:WP_155406233.1;Name=WP_155406233.1;Ontology_term=GO:0019867;end_range=99464,.;gbkey=CDS;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012104800.1;locus_tag=AD853_RS20840;partial=true;product=autotransporter outer membrane beta-barrel domain-containing protein;protein_id=WP_155406233.1;transl_table=11 ##sequence-region NZ_CPUY01000018.1 1 98417 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=633 NZ_CPUY01000018.1 RefSeq region 1 98417 . + . ID=NZ_CPUY01000018.1:1..98417;Dbxref=taxon:633;collection-date=1900/2008;country=South Africa;gbkey=Src;genome=genomic;isolation-source=not known;mol_type=genomic DNA;nat-host=pig;serovar=O:3;strain=IP32544 NZ_CPUY01000018.1 RefSeq gene 1 144 . - . ID=gene-AD853_RS20845;Name=AD853_RS20845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS20845;partial=true;start_range=.,1 NZ_CPUY01000018.1 Protein Homology CDS 1 144 . - 0 ID=cds-WP_462511173.1;Parent=gene-AD853_RS20845;Dbxref=GenBank:WP_462511173.1;Name=WP_462511173.1;Ontology_term=GO:0051276,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=chromosome organization|0051276||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002217366.1;locus_tag=AD853_RS20845;partial=true;product=terminase small subunit;protein_id=WP_462511173.1;start_range=.,1;transl_table=11 NZ_CPUY01000018.1 RefSeq pseudogene 267 464 . - . ID=gene-AD853_RS15405;Name=AD853_RS15405;end_range=464,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD853_RS15405;partial=true;pseudo=true NZ_CPUY01000018.1 Protein Homology CDS 267 464 . - 0 ID=cds-AD853_RS15405;Parent=gene-AD853_RS15405;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0030153,GO:0015643;end_range=464,.;gbkey=CDS;go_function=toxic substance binding|0015643||IEA;go_process=bacteriocin immunity|0030153||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192913.1;locus_tag=AD853_RS15405;partial=true;product=colicin immunity domain-containing protein;pseudo=true;transl_table=11 NZ_CPUY01000018.1 RefSeq gene 617 1093 . - . ID=gene-AD853_RS15410;Name=AD853_RS15410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS15410;old_locus_tag=ERS008462_03118 NZ_CPUY01000018.1 Protein Homology CDS 617 1093 . - 0 ID=cds-WP_002210060.1;Parent=gene-AD853_RS15410;Dbxref=GenBank:WP_002210060.1;Name=WP_002210060.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210060.1;locus_tag=AD853_RS15410;product=YrhA family protein;protein_id=WP_002210060.1;transl_table=11 NZ_CPUY01000018.1 RefSeq gene 1159 1833 . - . ID=gene-AD853_RS15415;Name=AD853_RS15415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS15415;old_locus_tag=ERS008462_03119 NZ_CPUY01000018.1 Protein Homology CDS 1159 1833 . - 0 ID=cds-WP_011193167.1;Parent=gene-AD853_RS15415;Dbxref=GenBank:WP_011193167.1;Name=WP_011193167.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210059.1;locus_tag=AD853_RS15415;product=GntR family transcriptional regulator;protein_id=WP_011193167.1;transl_table=11 NZ_CPUY01000018.1 RefSeq gene 1923 3287 . - . ID=gene-AD853_RS15420;Name=AD853_RS15420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS15420;old_locus_tag=ERS008462_03120 NZ_CPUY01000018.1 Protein Homology CDS 1923 3287 . - 0 ID=cds-WP_012104388.1;Parent=gene-AD853_RS15420;Dbxref=GenBank:WP_012104388.1;Name=WP_012104388.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210058.1;locus_tag=AD853_RS15420;product=MFS transporter;protein_id=WP_012104388.1;transl_table=11 NZ_CPUY01000018.1 RefSeq gene 3441 3836 . - . ID=gene-AD853_RS15425;Name=AD853_RS15425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS15425;old_locus_tag=ERS008462_03121 NZ_CPUY01000018.1 Protein Homology CDS 3441 3836 . - 0 ID=cds-WP_012104387.1;Parent=gene-AD853_RS15425;Dbxref=GenBank:WP_012104387.1;Name=WP_012104387.1;Ontology_term=GO:0051920;gbkey=CDS;go_function=peroxiredoxin activity|0051920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002217470.1;locus_tag=AD853_RS15425;product=carboxymuconolactone decarboxylase family protein;protein_id=WP_012104387.1;transl_table=11 NZ_CPUY01000018.1 RefSeq gene 4028 4918 . - . ID=gene-AD853_RS15430;Name=AD853_RS15430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS15430;old_locus_tag=ERS008462_03122 NZ_CPUY01000018.1 Protein Homology CDS 4028 4918 . - 0 ID=cds-WP_038825092.1;Parent=gene-AD853_RS15430;Dbxref=GenBank:WP_038825092.1;Name=WP_038825092.1;Ontology_term=GO:0016491,GO:0050661,GO:0051287;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NADP binding|0050661||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210056.1;locus_tag=AD853_RS15430;product=NAD(P)-dependent oxidoreductase;protein_id=WP_038825092.1;transl_table=11 NZ_CPUY01000018.1 RefSeq gene 4983 5795 . - . ID=gene-AD853_RS15435;Name=AD853_RS15435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS15435;old_locus_tag=ERS008462_03123 NZ_CPUY01000018.1 Protein Homology CDS 4983 5795 . - 0 ID=cds-WP_012104386.1;Parent=gene-AD853_RS15435;Dbxref=GenBank:WP_012104386.1;Name=WP_012104386.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012104386.1;locus_tag=AD853_RS15435;product=N-acyl homoserine lactonase family protein;protein_id=WP_012104386.1;transl_table=11 NZ_CPUY01000018.1 RefSeq gene 6271 6738 . + . ID=gene-AD853_RS15440;Name=AD853_RS15440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS15440;old_locus_tag=ERS008462_03124 NZ_CPUY01000018.1 Protein Homology CDS 6271 6738 . + 0 ID=cds-WP_002210054.1;Parent=gene-AD853_RS15440;Dbxref=GenBank:WP_002210054.1;Name=WP_002210054.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005165921.1;locus_tag=AD853_RS15440;product=outer membrane lipoprotein;protein_id=WP_002210054.1;transl_table=11 NZ_CPUY01000018.1 RefSeq gene 7272 7484 . + . ID=gene-AD853_RS15455;Name=cspE;gbkey=Gene;gene=cspE;gene_biotype=protein_coding;gene_synonym=gicA,msmC;locus_tag=AD853_RS15455 NZ_CPUY01000018.1 Protein Homology CDS 7272 7484 . + 0 ID=cds-WP_012104384.1;Parent=gene-AD853_RS15455;Dbxref=GenBank:WP_012104384.1;Name=WP_012104384.1;Ontology_term=GO:0031564,GO:0001072,GO:0003697,GO:0003723;gbkey=CDS;gene=cspE;go_function=transcription antitermination factor activity%2C RNA binding|0001072||IEA,single-stranded DNA binding|0003697||IEA,RNA binding|0003723||IEA;go_process=transcription antitermination|0031564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210052.1;locus_tag=AD853_RS15455;product=transcription antiterminator/RNA stability regulator CspE;protein_id=WP_012104384.1;transl_table=11 NZ_CPUY01000018.1 RefSeq gene 7744 7956 . + . ID=gene-AD853_RS15460;Name=cspG;gbkey=Gene;gene=cspG;gene_biotype=protein_coding;locus_tag=AD853_RS15460 NZ_CPUY01000018.1 Protein Homology CDS 7744 7956 . + 0 ID=cds-WP_038400785.1;Parent=gene-AD853_RS15460;Dbxref=GenBank:WP_038400785.1;Name=WP_038400785.1;gbkey=CDS;gene=cspG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210052.1;locus_tag=AD853_RS15460;product=cold shock protein CspG;protein_id=WP_038400785.1;transl_table=11 NZ_CPUY01000018.1 RefSeq gene 8292 9467 . + . ID=gene-AD853_RS15470;Name=AD853_RS15470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS15470;old_locus_tag=ERS008462_03127 NZ_CPUY01000018.1 Protein Homology CDS 8292 9467 . + 0 ID=cds-WP_002210051.1;Parent=gene-AD853_RS15470;Dbxref=GenBank:WP_002210051.1;Name=WP_002210051.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019079427.1;locus_tag=AD853_RS15470;product=coiled-coil domain-containing protein;protein_id=WP_002210051.1;transl_table=11 NZ_CPUY01000018.1 RefSeq gene 9574 10920 . - . ID=gene-AD853_RS15475;Name=AD853_RS15475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS15475;old_locus_tag=ERS008462_03128 NZ_CPUY01000018.1 Protein Homology CDS 9574 10920 . - 0 ID=cds-WP_011193175.1;Parent=gene-AD853_RS15475;Dbxref=GenBank:WP_011193175.1;Name=WP_011193175.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002220957.1;locus_tag=AD853_RS15475;product=esterase-like activity of phytase family protein;protein_id=WP_011193175.1;transl_table=11 NZ_CPUY01000018.1 RefSeq gene 11174 12025 . + . ID=gene-AD853_RS15480;Name=yghU;gbkey=Gene;gene=yghU;gene_biotype=protein_coding;locus_tag=AD853_RS15480;old_locus_tag=ERS008462_03129 NZ_CPUY01000018.1 Protein Homology CDS 11174 12025 . + 0 ID=cds-WP_012104383.1;Parent=gene-AD853_RS15480;Dbxref=GenBank:WP_012104383.1;Name=WP_012104383.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;gene=yghU;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002228699.1;locus_tag=AD853_RS15480;product=glutathione-dependent disulfide-bond oxidoreductase;protein_id=WP_012104383.1;transl_table=11 NZ_CPUY01000018.1 RefSeq gene 12232 12837 . - . ID=gene-AD853_RS15485;Name=AD853_RS15485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS15485;old_locus_tag=ERS008462_03130 NZ_CPUY01000018.1 Protein Homology CDS 12232 12837 . - 0 ID=cds-WP_038825058.1;Parent=gene-AD853_RS15485;Dbxref=GenBank:WP_038825058.1;Name=WP_038825058.1;Ontology_term=GO:1901135,GO:0097367;gbkey=CDS;go_function=carbohydrate derivative binding|0097367||IEA;go_process=carbohydrate derivative metabolic process|1901135||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012229272.1;locus_tag=AD853_RS15485;product=KpsF/GutQ family sugar-phosphate isomerase;protein_id=WP_038825058.1;transl_table=11 NZ_CPUY01000018.1 RefSeq gene 12834 14471 . - . ID=gene-AD853_RS15490;Name=AD853_RS15490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS15490;old_locus_tag=ERS008462_03131 NZ_CPUY01000018.1 Protein Homology CDS 12834 14471 . - 0 ID=cds-WP_050124624.1;Parent=gene-AD853_RS15490;Dbxref=GenBank:WP_050124624.1;Name=WP_050124624.1;Ontology_term=GO:0016310,GO:0005524,GO:0019200;gbkey=CDS;go_function=ATP binding|0005524||IEA,carbohydrate kinase activity|0019200||IEA;go_process=phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210047.1;locus_tag=AD853_RS15490;product=FGGY-family carbohydrate kinase;protein_id=WP_050124624.1;transl_table=11 NZ_CPUY01000018.1 RefSeq gene 14490 15443 . - . ID=gene-AD853_RS15495;Name=AD853_RS15495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS15495;old_locus_tag=ERS008462_03132 NZ_CPUY01000018.1 Protein Homology CDS 14490 15443 . - 0 ID=cds-WP_011193178.1;Parent=gene-AD853_RS15495;Dbxref=GenBank:WP_011193178.1;Name=WP_011193178.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011193178.1;locus_tag=AD853_RS15495;product=ABC transporter permease;protein_id=WP_011193178.1;transl_table=11 NZ_CPUY01000018.1 RefSeq gene 15445 16434 . - . ID=gene-AD853_RS15500;Name=AD853_RS15500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS15500;old_locus_tag=ERS008462_03133 NZ_CPUY01000018.1 Protein Homology CDS 15445 16434 . - 0 ID=cds-WP_002210045.1;Parent=gene-AD853_RS15500;Dbxref=GenBank:WP_002210045.1;Name=WP_002210045.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210045.1;locus_tag=AD853_RS15500;product=ABC transporter permease;protein_id=WP_002210045.1;transl_table=11 NZ_CPUY01000018.1 RefSeq gene 16427 17923 . - . ID=gene-AD853_RS15505;Name=AD853_RS15505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS15505;old_locus_tag=ERS008462_03134 NZ_CPUY01000018.1 Protein Homology CDS 16427 17923 . - 0 ID=cds-WP_038825062.1;Parent=gene-AD853_RS15505;Dbxref=GenBank:WP_038825062.1;Name=WP_038825062.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005191419.1;locus_tag=AD853_RS15505;product=sugar ABC transporter ATP-binding protein;protein_id=WP_038825062.1;transl_table=11 NZ_CPUY01000018.1 RefSeq gene 18127 19116 . - . ID=gene-AD853_RS15510;Name=AD853_RS15510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS15510;old_locus_tag=ERS008462_03135 NZ_CPUY01000018.1 Protein Homology CDS 18127 19116 . - 0 ID=cds-WP_012104382.1;Parent=gene-AD853_RS15510;Dbxref=GenBank:WP_012104382.1;Name=WP_012104382.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013365221.1;locus_tag=AD853_RS15510;product=autoinducer 2 ABC transporter substrate-binding protein;protein_id=WP_012104382.1;transl_table=11 NZ_CPUY01000018.1 RefSeq gene 19922 20842 . + . ID=gene-AD853_RS15515;Name=lpxP;gbkey=Gene;gene=lpxP;gene_biotype=protein_coding;locus_tag=AD853_RS15515;old_locus_tag=ERS008462_03136 NZ_CPUY01000018.1 Protein Homology CDS 19922 20842 . + 0 ID=cds-WP_002210042.1;Parent=gene-AD853_RS15515;Dbxref=GenBank:WP_002210042.1;Name=WP_002210042.1;Ontology_term=GO:0009409,GO:0036104,GO:0008951,GO:0016020;gbkey=CDS;gene=lpxP;go_component=membrane|0016020||IEA;go_function=palmitoleoyl [acyl-carrier-protein]-dependent acyltransferase activity|0008951||IEA;go_process=response to cold|0009409||IEA,Kdo2-lipid A biosynthetic process|0036104||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004711175.1;locus_tag=AD853_RS15515;product=kdo(2)-lipid IV(A) palmitoleoyltransferase;protein_id=WP_002210042.1;transl_table=11 NZ_CPUY01000018.1 RefSeq gene 20994 22181 . + . ID=gene-AD853_RS15520;Name=AD853_RS15520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS15520;old_locus_tag=ERS008462_03137 NZ_CPUY01000018.1 Protein Homology CDS 20994 22181 . + 0 ID=cds-WP_002210041.1;Parent=gene-AD853_RS15520;Dbxref=GenBank:WP_002210041.1;Name=WP_002210041.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210041.1;locus_tag=AD853_RS15520;product=hypothetical protein;protein_id=WP_002210041.1;transl_table=11 NZ_CPUY01000018.1 RefSeq gene 22399 24048 . - . ID=gene-AD853_RS15525;Name=AD853_RS15525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS15525;old_locus_tag=ERS008462_03138 NZ_CPUY01000018.1 Protein Homology CDS 22399 24048 . - 0 ID=cds-WP_002215816.1;Parent=gene-AD853_RS15525;Dbxref=GenBank:WP_002215816.1;Name=WP_002215816.1;Ontology_term=GO:0006814,GO:0006885,GO:1902600,GO:0015385,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=sodium:proton antiporter activity|0015385||IEA;go_process=sodium ion transport|0006814||IEA,regulation of pH|0006885||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004704764.1;locus_tag=AD853_RS15525;product=Na+/H+ antiporter;protein_id=WP_002215816.1;transl_table=11 NZ_CPUY01000018.1 RefSeq gene 24413 25768 . - . ID=gene-AD853_RS15530;Name=AD853_RS15530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS15530;old_locus_tag=ERS008462_03139 NZ_CPUY01000018.1 Protein Homology CDS 24413 25768 . - 0 ID=cds-WP_002210039.1;Parent=gene-AD853_RS15530;Dbxref=GenBank:WP_002210039.1;Name=WP_002210039.1;Ontology_term=GO:0015851,GO:0015205,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=nucleobase transmembrane transporter activity|0015205||IEA;go_process=nucleobase transport|0015851||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210039.1;locus_tag=AD853_RS15530;product=NCS2 family permease;protein_id=WP_002210039.1;transl_table=11 NZ_CPUY01000018.1 RefSeq gene 26225 26428 . + . ID=gene-AD853_RS15535;Name=AD853_RS15535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS15535;old_locus_tag=ERS008462_03140 NZ_CPUY01000018.1 Protein Homology CDS 26225 26428 . + 0 ID=cds-WP_002210038.1;Parent=gene-AD853_RS15535;Dbxref=GenBank:WP_002210038.1;Name=WP_002210038.1;Ontology_term=GO:0044010,GO:0000987,GO:0015643;gbkey=CDS;go_function=cis-regulatory region sequence-specific DNA binding|0000987||IEA,toxic substance binding|0015643||IEA;go_process=single-species biofilm formation|0044010||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210038.1;locus_tag=AD853_RS15535;product=type II toxin-antitoxin system RelB/DinJ family antitoxin;protein_id=WP_002210038.1;transl_table=11 NZ_CPUY01000018.1 RefSeq pseudogene 26602 26670 . + . ID=gene-AD853_RS22285;Name=AD853_RS22285;end_range=26670,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD853_RS22285;partial=true;pseudo=true NZ_CPUY01000018.1 Protein Homology CDS 26602 26670 . + 0 ID=cds-AD853_RS22285;Parent=gene-AD853_RS22285;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=26670,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002224869.1;locus_tag=AD853_RS22285;partial=true;product=gluconate 5-dehydrogenase;pseudo=true;transl_table=11 NZ_CPUY01000018.1 RefSeq pseudogene 26670 26867 . + . ID=gene-AD853_RS20850;Name=AD853_RS20850;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD853_RS20850;partial=true;pseudo=true;start_range=.,26670 NZ_CPUY01000018.1 Protein Homology CDS 26670 26867 . + 0 ID=cds-AD853_RS20850;Parent=gene-AD853_RS20850;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004519,GO:0090729,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=endonuclease activity|0004519||IEA,toxin activity|0090729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013574136.1;locus_tag=AD853_RS20850;partial=true;product=type II toxin-antitoxin system RelE/ParE family toxin;pseudo=true;start_range=.,26670;transl_table=11 NZ_CPUY01000018.1 RefSeq gene 27047 27841 . - . ID=gene-AD853_RS15540;Name=ssuB;gbkey=Gene;gene=ssuB;gene_biotype=protein_coding;locus_tag=AD853_RS15540;old_locus_tag=ERS008462_03141 NZ_CPUY01000018.1 Protein Homology CDS 27047 27841 . - 0 ID=cds-WP_024063055.1;Parent=gene-AD853_RS15540;Dbxref=GenBank:WP_024063055.1;Name=WP_024063055.1;Ontology_term=GO:0005524;gbkey=CDS;gene=ssuB;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210036.1;locus_tag=AD853_RS15540;product=aliphatic sulfonates ABC transporter ATP-binding protein;protein_id=WP_024063055.1;transl_table=11 NZ_CPUY01000018.1 RefSeq gene 27838 28632 . - . ID=gene-AD853_RS15545;Name=ssuC;gbkey=Gene;gene=ssuC;gene_biotype=protein_coding;locus_tag=AD853_RS15545;old_locus_tag=ERS008462_03142 NZ_CPUY01000018.1 Protein Homology CDS 27838 28632 . - 0 ID=cds-WP_002213853.1;Parent=gene-AD853_RS15545;Dbxref=GenBank:WP_002213853.1;Name=WP_002213853.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=ssuC;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002213853.1;locus_tag=AD853_RS15545;product=aliphatic sulfonate ABC transporter permease SsuC;protein_id=WP_002213853.1;transl_table=11 NZ_CPUY01000018.1 RefSeq gene 28644 29792 . - . ID=gene-AD853_RS15550;Name=ssuD;gbkey=Gene;gene=ssuD;gene_biotype=protein_coding;locus_tag=AD853_RS15550;old_locus_tag=ERS008462_03143 NZ_CPUY01000018.1 Protein Homology CDS 28644 29792 . - 0 ID=cds-WP_012104377.1;Parent=gene-AD853_RS15550;Dbxref=GenBank:WP_012104377.1;Name=WP_012104377.1;Ontology_term=GO:0006790,GO:0008726,GO:0010181;gbkey=CDS;gene=ssuD;go_function=alkanesulfonate monooxygenase activity|0008726||IEA,FMN binding|0010181||IEA;go_process=sulfur compound metabolic process|0006790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016588500.1;locus_tag=AD853_RS15550;product=FMNH2-dependent alkanesulfonate monooxygenase;protein_id=WP_012104377.1;transl_table=11 NZ_CPUY01000018.1 RefSeq gene 29811 30917 . - . ID=gene-AD853_RS15555;Name=AD853_RS15555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS15555;old_locus_tag=ERS008462_03144 NZ_CPUY01000018.1 Protein Homology CDS 29811 30917 . - 0 ID=cds-WP_038824020.1;Parent=gene-AD853_RS15555;Dbxref=GenBank:WP_038824020.1;Name=WP_038824020.1;Ontology_term=GO:0042626,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012104376.1;locus_tag=AD853_RS15555;product=sulfonate ABC transporter substrate-binding protein;protein_id=WP_038824020.1;transl_table=11 NZ_CPUY01000018.1 RefSeq gene 30932 31513 . - . ID=gene-AD853_RS15560;Name=ssuE;gbkey=Gene;gene=ssuE;gene_biotype=protein_coding;locus_tag=AD853_RS15560;old_locus_tag=ERS008462_03145 NZ_CPUY01000018.1 Protein Homology CDS 30932 31513 . - 0 ID=cds-WP_002210032.1;Parent=gene-AD853_RS15560;Dbxref=GenBank:WP_002210032.1;Name=WP_002210032.1;Ontology_term=GO:0046306,GO:0008752;gbkey=CDS;gene=ssuE;go_function=FMN reductase [NAD(P)H] activity|0008752||IEA;go_process=alkanesulfonate catabolic process|0046306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210032.1;locus_tag=AD853_RS15560;product=NADPH-dependent FMN reductase;protein_id=WP_002210032.1;transl_table=11 NZ_CPUY01000018.1 RefSeq gene 31984 32685 . + . ID=gene-AD853_RS15565;Name=deoC;gbkey=Gene;gene=deoC;gene_biotype=protein_coding;locus_tag=AD853_RS15565;old_locus_tag=ERS008462_03146 NZ_CPUY01000018.1 Protein Homology CDS 31984 32685 . + 0 ID=cds-WP_011193185.1;Parent=gene-AD853_RS15565;Dbxref=GenBank:WP_011193185.1;Name=WP_011193185.1;Ontology_term=GO:0009264,GO:0004139,GO:0005737;gbkey=CDS;gene=deoC;go_component=cytoplasm|0005737||IEA;go_function=deoxyribose-phosphate aldolase activity|0004139||IEA;go_process=deoxyribonucleotide catabolic process|0009264||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210030.1;locus_tag=AD853_RS15565;product=deoxyribose-phosphate aldolase;protein_id=WP_011193185.1;transl_table=11 NZ_CPUY01000018.1 RefSeq gene 32842 33771 . + . ID=gene-AD853_RS15570;Name=AD853_RS15570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS15570;old_locus_tag=ERS008462_03147 NZ_CPUY01000018.1 Protein Homology CDS 32842 33771 . + 0 ID=cds-WP_011193186.1;Parent=gene-AD853_RS15570;Dbxref=GenBank:WP_011193186.1;Name=WP_011193186.1;Ontology_term=GO:0005524,GO:0019200;gbkey=CDS;go_function=ATP binding|0005524||IEA,carbohydrate kinase activity|0019200||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011193186.1;locus_tag=AD853_RS15570;product=ribokinase;protein_id=WP_011193186.1;transl_table=11 NZ_CPUY01000018.1 RefSeq gene 33777 34280 . + . ID=gene-AD853_RS15575;Name=rbsD;gbkey=Gene;gene=rbsD;gene_biotype=protein_coding;locus_tag=AD853_RS15575;old_locus_tag=ERS008462_03148 NZ_CPUY01000018.1 Protein Homology CDS 33777 34280 . + 0 ID=cds-WP_011193187.1;Parent=gene-AD853_RS15575;Dbxref=GenBank:WP_011193187.1;Name=WP_011193187.1;Ontology_term=GO:0016872;gbkey=CDS;gene=rbsD;go_function=intramolecular lyase activity|0016872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210027.1;locus_tag=AD853_RS15575;product=D-ribose pyranase;protein_id=WP_011193187.1;transl_table=11 NZ_CPUY01000018.1 RefSeq gene 34440 35306 . - . ID=gene-AD853_RS15580;Name=AD853_RS15580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS15580;old_locus_tag=ERS008462_03149 NZ_CPUY01000018.1 Protein Homology CDS 34440 35306 . - 0 ID=cds-WP_038824019.1;Parent=gene-AD853_RS15580;Dbxref=GenBank:WP_038824019.1;Name=WP_038824019.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012414063.1;locus_tag=AD853_RS15580;product=helix-turn-helix domain-containing protein;protein_id=WP_038824019.1;transl_table=11 NZ_CPUY01000018.1 RefSeq gene 35576 36706 . + . ID=gene-AD853_RS15585;Name=AD853_RS15585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS15585;old_locus_tag=ERS008462_03150 NZ_CPUY01000018.1 Protein Homology CDS 35576 36706 . + 0 ID=cds-WP_038824018.1;Parent=gene-AD853_RS15585;Dbxref=GenBank:WP_038824018.1;Name=WP_038824018.1;Ontology_term=GO:0000166,GO:0003824;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210025.1;locus_tag=AD853_RS15585;product=Gfo/Idh/MocA family protein;protein_id=WP_038824018.1;transl_table=11 NZ_CPUY01000018.1 RefSeq gene 36703 37602 . + . ID=gene-AD853_RS15590;Name=AD853_RS15590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS15590;old_locus_tag=ERS008462_03151 NZ_CPUY01000018.1 Protein Homology CDS 36703 37602 . + 0 ID=cds-WP_002210024.1;Parent=gene-AD853_RS15590;Dbxref=GenBank:WP_002210024.1;Name=WP_002210024.1;Ontology_term=GO:0003824,GO:0016853;gbkey=CDS;go_function=catalytic activity|0003824||IEA,isomerase activity|0016853||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210024.1;locus_tag=AD853_RS15590;product=sugar phosphate isomerase/epimerase family protein;protein_id=WP_002210024.1;transl_table=11 NZ_CPUY01000018.1 RefSeq gene 37949 38743 . - . ID=gene-AD853_RS15595;Name=AD853_RS15595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS15595;old_locus_tag=ERS008462_03152 NZ_CPUY01000018.1 Protein Homology CDS 37949 38743 . - 0 ID=cds-WP_002210023.1;Parent=gene-AD853_RS15595;Dbxref=GenBank:WP_002210023.1;Name=WP_002210023.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210023.1;locus_tag=AD853_RS15595;product=hypothetical protein;protein_id=WP_002210023.1;transl_table=11 NZ_CPUY01000018.1 RefSeq gene 38752 42888 . - . ID=gene-AD853_RS15600;Name=AD853_RS15600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS15600;old_locus_tag=ERS008462_03153 NZ_CPUY01000018.1 Protein Homology CDS 38752 42888 . - 0 ID=cds-WP_038824016.1;Parent=gene-AD853_RS15600;Dbxref=GenBank:WP_038824016.1;Name=WP_038824016.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002223804.1;locus_tag=AD853_RS15600;product=RHS repeat-associated core domain-containing protein;protein_id=WP_038824016.1;transl_table=11 NZ_CPUY01000018.1 RefSeq gene 42933 43355 . - . ID=gene-AD853_RS15605;Name=AD853_RS15605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS15605;old_locus_tag=ERS008462_03154 NZ_CPUY01000018.1 Protein Homology CDS 42933 43355 . - 0 ID=cds-WP_002213861.1;Parent=gene-AD853_RS15605;Dbxref=GenBank:WP_002213861.1;Name=WP_002213861.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002213861.1;locus_tag=AD853_RS15605;product=DUF1795 domain-containing protein;protein_id=WP_002213861.1;transl_table=11 NZ_CPUY01000018.1 RefSeq gene 43358 45553 . - . ID=gene-AD853_RS15610;Name=AD853_RS15610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS15610;old_locus_tag=ERS008462_03155 NZ_CPUY01000018.1 Protein Homology CDS 43358 45553 . - 0 ID=cds-WP_038824015.1;Parent=gene-AD853_RS15610;Dbxref=GenBank:WP_038824015.1;Name=WP_038824015.1;Ontology_term=GO:0033103,GO:0033104;gbkey=CDS;go_component=type VI protein secretion system complex|0033104||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011193192.1;locus_tag=AD853_RS15610;product=type VI secretion system Vgr family protein;protein_id=WP_038824015.1;transl_table=11 NZ_CPUY01000018.1 RefSeq gene 45575 46882 . - . ID=gene-AD853_RS21870;Name=AD853_RS21870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS21870;old_locus_tag=ERS008462_03156 NZ_CPUY01000018.1 Protein Homology CDS 45575 46882 . - 0 ID=cds-WP_038824014.1;Parent=gene-AD853_RS21870;Dbxref=GenBank:WP_038824014.1;Name=WP_038824014.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012414067.1;locus_tag=AD853_RS21870;product=VasL domain-containing protein;protein_id=WP_038824014.1;transl_table=11 NZ_CPUY01000018.1 RefSeq gene 47007 50540 . - . ID=gene-AD853_RS15620;Name=tssM;gbkey=Gene;gene=tssM;gene_biotype=protein_coding;locus_tag=AD853_RS15620;old_locus_tag=ERS008462_03157 NZ_CPUY01000018.1 Protein Homology CDS 47007 50540 . - 0 ID=cds-WP_038824013.1;Parent=gene-AD853_RS15620;Dbxref=GenBank:WP_038824013.1;Name=WP_038824013.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssM;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012414068.1;locus_tag=AD853_RS15620;product=type VI secretion system membrane subunit TssM;protein_id=WP_038824013.1;transl_table=11 NZ_CPUY01000018.1 RefSeq gene 50572 51960 . - . ID=gene-AD853_RS15625;Name=tssA;gbkey=Gene;gene=tssA;gene_biotype=protein_coding;locus_tag=AD853_RS15625;old_locus_tag=ERS008462_03158 NZ_CPUY01000018.1 Protein Homology CDS 50572 51960 . - 0 ID=cds-WP_050093441.1;Parent=gene-AD853_RS15625;Dbxref=GenBank:WP_050093441.1;Name=WP_050093441.1;gbkey=CDS;gene=tssA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212110.1;locus_tag=AD853_RS15625;product=type VI secretion system protein TssA;protein_id=WP_050093441.1;transl_table=11 NZ_CPUY01000018.1 RefSeq pseudogene 51966 52653 . - . ID=gene-AD853_RS15630;Name=vasI;gbkey=Gene;gene=vasI;gene_biotype=pseudogene;locus_tag=AD853_RS15630;old_locus_tag=ERS008462_03159;pseudo=true NZ_CPUY01000018.1 Protein Homology CDS 51966 52653 . - 0 ID=cds-AD853_RS15630;Parent=gene-AD853_RS15630;Note=frameshifted;gbkey=CDS;gene=vasI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012303454.1;locus_tag=AD853_RS15630;product=type VI secretion system-associated protein VasI;pseudo=true;transl_table=11 NZ_CPUY01000018.1 RefSeq gene 52650 53447 . - . ID=gene-AD853_RS15635;Name=AD853_RS15635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS15635;old_locus_tag=ERS008462_03161 NZ_CPUY01000018.1 Protein Homology CDS 52650 53447 . - 0 ID=cds-WP_002212108.1;Parent=gene-AD853_RS15635;Dbxref=GenBank:WP_002212108.1;Name=WP_002212108.1;Ontology_term=GO:0043565;gbkey=CDS;go_function=sequence-specific DNA binding|0043565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212108.1;locus_tag=AD853_RS15635;product=helix-turn-helix domain-containing protein;protein_id=WP_002212108.1;transl_table=11 NZ_CPUY01000018.1 RefSeq pseudogene 53444 55982 . - . ID=gene-AD853_RS15640;Name=tssH;gbkey=Gene;gene=tssH;gene_biotype=pseudogene;gene_synonym=clpV;locus_tag=AD853_RS15640;pseudo=true NZ_CPUY01000018.1 Protein Homology CDS 53444 55982 . - 0 ID=cds-AD853_RS15640;Parent=gene-AD853_RS15640;Note=frameshifted;Ontology_term=GO:0033103,GO:0016887,GO:0033104;gbkey=CDS;gene=tssH;go_component=type VI protein secretion system complex|0033104||IEA;go_function=ATP hydrolysis activity|0016887||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012303453.1;locus_tag=AD853_RS15640;product=type VI secretion system ATPase TssH;pseudo=true;transl_table=11 NZ_CPUY01000018.1 RefSeq gene 55993 56760 . - . ID=gene-AD853_RS15645;Name=icmH;gbkey=Gene;gene=icmH;gene_biotype=protein_coding;locus_tag=AD853_RS15645;old_locus_tag=ERS008462_03164 NZ_CPUY01000018.1 Protein Homology CDS 55993 56760 . - 0 ID=cds-WP_002212106.1;Parent=gene-AD853_RS15645;Dbxref=GenBank:WP_002212106.1;Name=WP_002212106.1;gbkey=CDS;gene=icmH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212106.1;locus_tag=AD853_RS15645;product=type IVB secretion system protein IcmH/DotU;protein_id=WP_002212106.1;transl_table=11 NZ_CPUY01000018.1 RefSeq gene 56760 58106 . - . ID=gene-AD853_RS15650;Name=tssK;gbkey=Gene;gene=tssK;gene_biotype=protein_coding;locus_tag=AD853_RS15650;old_locus_tag=ERS008462_03165 NZ_CPUY01000018.1 Protein Homology CDS 56760 58106 . - 0 ID=cds-WP_002212105.1;Parent=gene-AD853_RS15650;Dbxref=GenBank:WP_002212105.1;Name=WP_002212105.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssK;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004704536.1;locus_tag=AD853_RS15650;product=type VI secretion system baseplate subunit TssK;protein_id=WP_002212105.1;transl_table=11 NZ_CPUY01000018.1 RefSeq gene 58109 58654 . - . ID=gene-AD853_RS15655;Name=tssJ;gbkey=Gene;gene=tssJ;gene_biotype=protein_coding;locus_tag=AD853_RS15655;old_locus_tag=ERS008462_03166 NZ_CPUY01000018.1 Protein Homology CDS 58109 58654 . - 0 ID=cds-WP_002212104.1;Parent=gene-AD853_RS15655;Dbxref=GenBank:WP_002212104.1;Name=WP_002212104.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssJ;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012104358.1;locus_tag=AD853_RS15655;product=type VI secretion system lipoprotein TssJ;protein_id=WP_002212104.1;transl_table=11 NZ_CPUY01000018.1 RefSeq gene 58654 59970 . - . ID=gene-AD853_RS15660;Name=tagH;gbkey=Gene;gene=tagH;gene_biotype=protein_coding;locus_tag=AD853_RS15660;old_locus_tag=ERS008462_03167 NZ_CPUY01000018.1 Protein Homology CDS 58654 59970 . - 0 ID=cds-WP_024063062.1;Parent=gene-AD853_RS15660;Dbxref=GenBank:WP_024063062.1;Name=WP_024063062.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tagH;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012303452.1;locus_tag=AD853_RS15660;product=type VI secretion system-associated FHA domain protein TagH;protein_id=WP_024063062.1;transl_table=11 NZ_CPUY01000018.1 RefSeq gene 60076 61164 . - . ID=gene-AD853_RS15665;Name=tssG;gbkey=Gene;gene=tssG;gene_biotype=protein_coding;locus_tag=AD853_RS15665;old_locus_tag=ERS008462_03168 NZ_CPUY01000018.1 Protein Homology CDS 60076 61164 . - 0 ID=cds-WP_038824008.1;Parent=gene-AD853_RS15665;Dbxref=GenBank:WP_038824008.1;Name=WP_038824008.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssG;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002213885.1;locus_tag=AD853_RS15665;product=type VI secretion system baseplate subunit TssG;protein_id=WP_038824008.1;transl_table=11 NZ_CPUY01000018.1 RefSeq gene 61128 62948 . - . ID=gene-AD853_RS15670;Name=tssF;gbkey=Gene;gene=tssF;gene_biotype=protein_coding;locus_tag=AD853_RS15670;old_locus_tag=ERS008462_03169 NZ_CPUY01000018.1 Protein Homology CDS 61128 62948 . - 0 ID=cds-WP_011193201.1;Parent=gene-AD853_RS15670;Dbxref=GenBank:WP_011193201.1;Name=WP_011193201.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssF;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015841407.1;locus_tag=AD853_RS15670;product=type VI secretion system baseplate subunit TssF;protein_id=WP_011193201.1;transl_table=11 NZ_CPUY01000018.1 RefSeq gene 62948 63388 . - . ID=gene-AD853_RS15675;Name=tssE;gbkey=Gene;gene=tssE;gene_biotype=protein_coding;locus_tag=AD853_RS15675;old_locus_tag=ERS008462_03170 NZ_CPUY01000018.1 Protein Homology CDS 62948 63388 . - 0 ID=cds-WP_002212100.1;Parent=gene-AD853_RS15675;Dbxref=GenBank:WP_002212100.1;Name=WP_002212100.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssE;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212100.1;locus_tag=AD853_RS15675;product=type VI secretion system baseplate subunit TssE;protein_id=WP_002212100.1;transl_table=11 NZ_CPUY01000018.1 RefSeq gene 63395 64876 . - . ID=gene-AD853_RS15680;Name=tssC;gbkey=Gene;gene=tssC;gene_biotype=protein_coding;locus_tag=AD853_RS15680;old_locus_tag=ERS008462_03171 NZ_CPUY01000018.1 Protein Homology CDS 63395 64876 . - 0 ID=cds-WP_002230616.1;Parent=gene-AD853_RS15680;Dbxref=GenBank:WP_002230616.1;Name=WP_002230616.1;Ontology_term=GO:0033103,GO:0033104;gbkey=CDS;gene=tssC;go_component=type VI protein secretion system complex|0033104||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212099.1;locus_tag=AD853_RS15680;product=type VI secretion system contractile sheath large subunit;protein_id=WP_002230616.1;transl_table=11 NZ_CPUY01000018.1 RefSeq gene 64924 65421 . - . ID=gene-AD853_RS15685;Name=tssB;gbkey=Gene;gene=tssB;gene_biotype=protein_coding;locus_tag=AD853_RS15685;old_locus_tag=ERS008462_03172 NZ_CPUY01000018.1 Protein Homology CDS 64924 65421 . - 0 ID=cds-WP_002212098.1;Parent=gene-AD853_RS15685;Dbxref=GenBank:WP_002212098.1;Name=WP_002212098.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssB;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011193202.1;locus_tag=AD853_RS15685;product=type VI secretion system contractile sheath small subunit;protein_id=WP_002212098.1;transl_table=11 NZ_CPUY01000018.1 RefSeq gene 65945 66463 . + . ID=gene-AD853_RS15690;Name=AD853_RS15690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS15690;old_locus_tag=ERS008462_03173 NZ_CPUY01000018.1 Protein Homology CDS 65945 66463 . + 0 ID=cds-WP_011193203.1;Parent=gene-AD853_RS15690;Dbxref=GenBank:WP_011193203.1;Name=WP_011193203.1;Ontology_term=GO:0033103;gbkey=CDS;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308261.1;locus_tag=AD853_RS15690;product=Hcp family type VI secretion system effector;protein_id=WP_011193203.1;transl_table=11 NZ_CPUY01000018.1 RefSeq gene 67221 68132 . - . ID=gene-AD853_RS15695;Name=malM;gbkey=Gene;gene=malM;gene_biotype=protein_coding;locus_tag=AD853_RS15695;old_locus_tag=ERS008462_03174 NZ_CPUY01000018.1 Protein Homology CDS 67221 68132 . - 0 ID=cds-WP_038824006.1;Parent=gene-AD853_RS15695;Dbxref=GenBank:WP_038824006.1;Name=WP_038824006.1;Ontology_term=GO:0008643,GO:0042597;gbkey=CDS;gene=malM;go_component=periplasmic space|0042597||IEA;go_process=carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019080119.1;locus_tag=AD853_RS15695;product=maltose operon protein MalM;protein_id=WP_038824006.1;transl_table=11 NZ_CPUY01000018.1 RefSeq gene 68373 69644 . - . ID=gene-AD853_RS15700;Name=AD853_RS15700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS15700;old_locus_tag=ERS008462_03175 NZ_CPUY01000018.1 Protein Homology CDS 68373 69644 . - 0 ID=cds-WP_002212092.1;Parent=gene-AD853_RS15700;Dbxref=GenBank:WP_002212092.1;Name=WP_002212092.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212092.1;locus_tag=AD853_RS15700;product=maltoporin;protein_id=WP_002212092.1;transl_table=11 NZ_CPUY01000018.1 RefSeq gene 69715 70824 . - . ID=gene-AD853_RS15705;Name=malK;gbkey=Gene;gene=malK;gene_biotype=protein_coding;locus_tag=AD853_RS15705;old_locus_tag=ERS008462_03176 NZ_CPUY01000018.1 Protein Homology CDS 69715 70824 . - 0 ID=cds-WP_002212091.1;Parent=gene-AD853_RS15705;Dbxref=GenBank:WP_002212091.1;Name=WP_002212091.1;Ontology_term=GO:0008643,GO:0055085,GO:0005524,GO:0140359,GO:0043190;gbkey=CDS;gene=malK;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313045.1;locus_tag=AD853_RS15705;product=maltose/maltodextrin ABC transporter ATP-binding protein MalK;protein_id=WP_002212091.1;transl_table=11 NZ_CPUY01000018.1 RefSeq gene 70828 71055 . - . ID=gene-AD853_RS15710;Name=AD853_RS15710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS15710 NZ_CPUY01000018.1 Protein Homology CDS 70828 71055 . - 0 ID=cds-WP_042593159.1;Parent=gene-AD853_RS15710;Dbxref=GenBank:WP_042593159.1;Name=WP_042593159.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002221973.1;locus_tag=AD853_RS15710;product=hypothetical protein;protein_id=WP_042593159.1;transl_table=11 NZ_CPUY01000018.1 RefSeq gene 71652 72863 . + . ID=gene-AD853_RS15715;Name=malE;gbkey=Gene;gene=malE;gene_biotype=protein_coding;locus_tag=AD853_RS15715;old_locus_tag=ERS008462_03177 NZ_CPUY01000018.1 Protein Homology CDS 71652 72863 . + 0 ID=cds-WP_002212089.1;Parent=gene-AD853_RS15715;Dbxref=GenBank:WP_002212089.1;Name=WP_002212089.1;Ontology_term=GO:0008643,GO:0055085,GO:0015144;gbkey=CDS;gene=malE;go_function=carbohydrate transmembrane transporter activity|0015144||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011906139.1;locus_tag=AD853_RS15715;product=maltose/maltodextrin ABC transporter substrate-binding protein MalE;protein_id=WP_002212089.1;transl_table=11 NZ_CPUY01000018.1 RefSeq gene 73051 74628 . + . ID=gene-AD853_RS15720;Name=malF;gbkey=Gene;gene=malF;gene_biotype=protein_coding;locus_tag=AD853_RS15720;old_locus_tag=ERS008462_03178 NZ_CPUY01000018.1 Protein Homology CDS 73051 74628 . + 0 ID=cds-WP_011193206.1;Parent=gene-AD853_RS15720;Dbxref=GenBank:WP_011193206.1;Name=WP_011193206.1;Ontology_term=GO:0055085,GO:0043190;gbkey=CDS;gene=malF;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004715839.1;locus_tag=AD853_RS15720;product=maltose ABC transporter permease MalF;protein_id=WP_011193206.1;transl_table=11 NZ_CPUY01000018.1 RefSeq gene 74642 75532 . + . ID=gene-AD853_RS15725;Name=malG;gbkey=Gene;gene=malG;gene_biotype=protein_coding;locus_tag=AD853_RS15725;old_locus_tag=ERS008462_03179 NZ_CPUY01000018.1 Protein Homology CDS 74642 75532 . + 0 ID=cds-WP_002212087.1;Parent=gene-AD853_RS15725;Dbxref=GenBank:WP_002212087.1;Name=WP_002212087.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=malG;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224556.1;locus_tag=AD853_RS15725;product=maltose ABC transporter permease MalG;protein_id=WP_002212087.1;transl_table=11 NZ_CPUY01000018.1 RefSeq gene 75675 76082 . - . ID=gene-AD853_RS15730;Name=psiE;gbkey=Gene;gene=psiE;gene_biotype=protein_coding;locus_tag=AD853_RS15730;old_locus_tag=ERS008462_03180 NZ_CPUY01000018.1 Protein Homology CDS 75675 76082 . - 0 ID=cds-WP_038824005.1;Parent=gene-AD853_RS15730;Dbxref=GenBank:WP_038824005.1;Name=WP_038824005.1;gbkey=CDS;gene=psiE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004705335.1;locus_tag=AD853_RS15730;product=phosphate-starvation-inducible protein PsiE;protein_id=WP_038824005.1;transl_table=11 NZ_CPUY01000018.1 RefSeq gene 76217 77863 . - . ID=gene-AD853_RS15735;Name=pgi;gbkey=Gene;gene=pgi;gene_biotype=protein_coding;locus_tag=AD853_RS15735;old_locus_tag=ERS008462_03181 NZ_CPUY01000018.1 Protein Homology CDS 76217 77863 . - 0 ID=cds-WP_002212085.1;Parent=gene-AD853_RS15735;Dbxref=GenBank:WP_002212085.1;Name=WP_002212085.1;Ontology_term=GO:0006094,GO:0006096,GO:0004347;gbkey=CDS;gene=pgi;go_function=glucose-6-phosphate isomerase activity|0004347||IEA;go_process=gluconeogenesis|0006094||IEA,glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004705333.1;locus_tag=AD853_RS15735;product=glucose-6-phosphate isomerase;protein_id=WP_002212085.1;transl_table=11 NZ_CPUY01000018.1 RefSeq gene 78233 79618 . + . ID=gene-AD853_RS15740;Name=lysC;gbkey=Gene;gene=lysC;gene_biotype=protein_coding;locus_tag=AD853_RS15740;old_locus_tag=ERS008462_03182 NZ_CPUY01000018.1 Protein Homology CDS 78233 79618 . + 0 ID=cds-WP_011193207.1;Parent=gene-AD853_RS15740;Dbxref=GenBank:WP_011193207.1;Name=WP_011193207.1;Ontology_term=GO:0009089,GO:0004072;gbkey=CDS;gene=lysC;go_function=aspartate kinase activity|0004072||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016258117.1;locus_tag=AD853_RS15740;product=lysine-sensitive aspartokinase 3;protein_id=WP_011193207.1;transl_table=11 NZ_CPUY01000018.1 RefSeq gene 80166 81854 . + . ID=gene-AD853_RS15745;Name=AD853_RS15745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS15745;old_locus_tag=ERS008462_03183 NZ_CPUY01000018.1 Protein Homology CDS 80166 81854 . + 0 ID=cds-WP_038824022.1;Parent=gene-AD853_RS15745;Dbxref=GenBank:WP_038824022.1;Name=WP_038824022.1;Ontology_term=GO:0006811,GO:0015031,GO:0015288,GO:0046930;gbkey=CDS;go_component=pore complex|0046930||IEA;go_function=porin activity|0015288||IEA;go_process=monoatomic ion transport|0006811||IEA,protein transport|0015031||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005165457.1;locus_tag=AD853_RS15745;product=ShlB/FhaC/HecB family hemolysin secretion/activation protein;protein_id=WP_038824022.1;transl_table=11 NZ_CPUY01000018.1 RefSeq gene 81924 86825 . + . ID=gene-AD853_RS15750;Name=AD853_RS15750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS15750;old_locus_tag=ERS008462_03184 NZ_CPUY01000018.1 Protein Homology CDS 81924 86825 . + 0 ID=cds-WP_038824003.1;Parent=gene-AD853_RS15750;Dbxref=GenBank:WP_038824003.1;Name=WP_038824003.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019082191.1;locus_tag=AD853_RS15750;product=hemagglutinin repeat-containing protein;protein_id=WP_038824003.1;transl_table=11 NZ_CPUY01000018.1 RefSeq gene 86921 90616 . - . ID=gene-AD853_RS15755;Name=metH;gbkey=Gene;gene=metH;gene_biotype=protein_coding;locus_tag=AD853_RS15755;old_locus_tag=ERS008462_03185 NZ_CPUY01000018.1 Protein Homology CDS 86921 90616 . - 0 ID=cds-WP_038824002.1;Parent=gene-AD853_RS15755;Dbxref=GenBank:WP_038824002.1;Name=WP_038824002.1;Ontology_term=GO:0009086,GO:0008270,GO:0008705,GO:0031419;gbkey=CDS;gene=metH;go_function=zinc ion binding|0008270||IEA,methionine synthase activity|0008705||IEA,cobalamin binding|0031419||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011906136.1;locus_tag=AD853_RS15755;product=methionine synthase;protein_id=WP_038824002.1;transl_table=11 NZ_CPUY01000018.1 RefSeq gene 90831 91673 . + . ID=gene-AD853_RS15760;Name=iclR;gbkey=Gene;gene=iclR;gene_biotype=protein_coding;locus_tag=AD853_RS15760;old_locus_tag=ERS008462_03186 NZ_CPUY01000018.1 Protein Homology CDS 90831 91673 . + 0 ID=cds-WP_002230619.1;Parent=gene-AD853_RS15760;Dbxref=GenBank:WP_002230619.1;Name=WP_002230619.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=iclR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002230619.1;locus_tag=AD853_RS15760;product=glyoxylate bypass operon transcriptional repressor IclR;protein_id=WP_002230619.1;transl_table=11 NZ_CPUY01000018.1 RefSeq gene 91793 93520 . - . ID=gene-AD853_RS15765;Name=aceK;gbkey=Gene;gene=aceK;gene_biotype=protein_coding;locus_tag=AD853_RS15765;old_locus_tag=ERS008462_03187 NZ_CPUY01000018.1 Protein Homology CDS 91793 93520 . - 0 ID=cds-WP_002212079.1;Parent=gene-AD853_RS15765;Dbxref=GenBank:WP_002212079.1;Name=WP_002212079.1;Ontology_term=GO:0006006,GO:0008772,GO:0016791;gbkey=CDS;gene=aceK;go_function=[isocitrate dehydrogenase (NADP+)] kinase activity|0008772||IEA,phosphatase activity|0016791||IEA;go_process=glucose metabolic process|0006006||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212079.1;locus_tag=AD853_RS15765;product=bifunctional isocitrate dehydrogenase kinase/phosphatase;protein_id=WP_002212079.1;transl_table=11 NZ_CPUY01000018.1 RefSeq gene 93593 94900 . - . ID=gene-AD853_RS15770;Name=aceA;gbkey=Gene;gene=aceA;gene_biotype=protein_coding;locus_tag=AD853_RS15770;old_locus_tag=ERS008462_03188 NZ_CPUY01000018.1 Protein Homology CDS 93593 94900 . - 0 ID=cds-WP_011193211.1;Parent=gene-AD853_RS15770;Dbxref=GenBank:WP_011193211.1;Name=WP_011193211.1;Ontology_term=GO:0019752,GO:0004451;gbkey=CDS;gene=aceA;go_function=isocitrate lyase activity|0004451||IEA;go_process=carboxylic acid metabolic process|0019752||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009111237.1;locus_tag=AD853_RS15770;product=isocitrate lyase;protein_id=WP_011193211.1;transl_table=11 NZ_CPUY01000018.1 RefSeq gene 94947 96545 . - . ID=gene-AD853_RS15775;Name=aceB;gbkey=Gene;gene=aceB;gene_biotype=protein_coding;locus_tag=AD853_RS15775;old_locus_tag=ERS008462_03189 NZ_CPUY01000018.1 Protein Homology CDS 94947 96545 . - 0 ID=cds-WP_012104348.1;Parent=gene-AD853_RS15775;Dbxref=GenBank:WP_012104348.1;Name=WP_012104348.1;Ontology_term=GO:0006097,GO:0004474;gbkey=CDS;gene=aceB;go_function=malate synthase activity|0004474||IEA;go_process=glyoxylate cycle|0006097||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212077.1;locus_tag=AD853_RS15775;product=malate synthase A;protein_id=WP_012104348.1;transl_table=11 NZ_CPUY01000018.1 RefSeq gene 96966 97895 . - . ID=gene-AD853_RS15780;Name=metA;gbkey=Gene;gene=metA;gene_biotype=protein_coding;locus_tag=AD853_RS15780;old_locus_tag=ERS008462_03190 NZ_CPUY01000018.1 Protein Homology CDS 96966 97895 . - 0 ID=cds-WP_002212076.1;Parent=gene-AD853_RS15780;Dbxref=GenBank:WP_002212076.1;Name=WP_002212076.1;Ontology_term=GO:0019281,GO:0008899,GO:0005737;gbkey=CDS;gene=metA;go_component=cytoplasm|0005737||IEA;go_function=homoserine O-succinyltransferase activity|0008899||IEA;go_process=L-methionine biosynthetic process from homoserine via O-succinyl-L-homoserine and cystathionine|0019281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312958.1;locus_tag=AD853_RS15780;product=homoserine O-acetyltransferase MetA;protein_id=WP_002212076.1;transl_table=11 ##sequence-region NZ_CPUY01000019.1 1 86839 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=633 NZ_CPUY01000019.1 RefSeq region 1 86839 . + . ID=NZ_CPUY01000019.1:1..86839;Dbxref=taxon:633;collection-date=1900/2008;country=South Africa;gbkey=Src;genome=genomic;isolation-source=not known;mol_type=genomic DNA;nat-host=pig;serovar=O:3;strain=IP32544 NZ_CPUY01000019.1 RefSeq pseudogene 57 128 . + . ID=gene-AD853_RS21610;Name=AD853_RS21610;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD853_RS21610;partial=true;pseudo=true;start_range=.,57 NZ_CPUY01000019.1 Protein Homology CDS 57 128 . + 0 ID=cds-AD853_RS21610;Parent=gene-AD853_RS21610;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012413999.1;locus_tag=AD853_RS21610;partial=true;product=tight adherence pilus pseudopilin TadF;pseudo=true;start_range=.,57;transl_table=11 NZ_CPUY01000019.1 RefSeq gene 167 1708 . + . ID=gene-AD853_RS15785;Name=AD853_RS15785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS15785;old_locus_tag=ERS008462_03191 NZ_CPUY01000019.1 Protein Homology CDS 167 1708 . + 0 ID=cds-WP_038824386.1;Parent=gene-AD853_RS15785;Dbxref=GenBank:WP_038824386.1;Name=WP_038824386.1;Ontology_term=GO:0009297;gbkey=CDS;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002429268.1;locus_tag=AD853_RS15785;product=TadE/TadG family type IV pilus assembly protein;protein_id=WP_038824386.1;transl_table=11 NZ_CPUY01000019.1 RefSeq gene 1805 2236 . - . ID=gene-AD853_RS15790;Name=exbD;gbkey=Gene;gene=exbD;gene_biotype=protein_coding;locus_tag=AD853_RS15790;old_locus_tag=ERS008462_03193 NZ_CPUY01000019.1 Protein Homology CDS 1805 2236 . - 0 ID=cds-WP_012414002.1;Parent=gene-AD853_RS15790;Dbxref=GenBank:WP_012414002.1;Name=WP_012414002.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=exbD;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212170.1;locus_tag=AD853_RS15790;product=TonB system transport protein ExbD;protein_id=WP_012414002.1;transl_table=11 NZ_CPUY01000019.1 RefSeq gene 2240 3271 . - . ID=gene-AD853_RS15795;Name=exbB;gbkey=Gene;gene=exbB;gene_biotype=protein_coding;locus_tag=AD853_RS15795;old_locus_tag=ERS008462_03194 NZ_CPUY01000019.1 Protein Homology CDS 2240 3271 . - 0 ID=cds-WP_162769780.1;Parent=gene-AD853_RS15795;Dbxref=GenBank:WP_162769780.1;Name=WP_162769780.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=exbB;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212171.1;locus_tag=AD853_RS15795;product=tol-pal system-associated acyl-CoA thioesterase;protein_id=WP_162769780.1;transl_table=11 NZ_CPUY01000019.1 RefSeq gene 3750 4961 . + . ID=gene-AD853_RS15800;Name=metC;gbkey=Gene;gene=metC;gene_biotype=protein_coding;locus_tag=AD853_RS15800;old_locus_tag=ERS008462_03195 NZ_CPUY01000019.1 Protein Homology CDS 3750 4961 . + 0 ID=cds-WP_002212172.1;Parent=gene-AD853_RS15800;Dbxref=GenBank:WP_002212172.1;Name=WP_002212172.1;Ontology_term=GO:0006520,GO:0019346,GO:0030170,GO:0047804;gbkey=CDS;gene=metC;go_function=pyridoxal phosphate binding|0030170||IEA,cysteine-S-conjugate beta-lyase activity|0047804||IEA;go_process=amino acid metabolic process|0006520||IEA,transsulfuration|0019346||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212172.1;locus_tag=AD853_RS15800;product=cystathionine beta-lyase;protein_id=WP_002212172.1;transl_table=11 NZ_CPUY01000019.1 RefSeq gene 5155 5817 . + . ID=gene-AD853_RS15805;Name=AD853_RS15805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS15805;old_locus_tag=ERS008462_03196 NZ_CPUY01000019.1 Protein Homology CDS 5155 5817 . + 0 ID=cds-WP_002212173.1;Parent=gene-AD853_RS15805;Dbxref=GenBank:WP_002212173.1;Name=WP_002212173.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212173.1;locus_tag=AD853_RS15805;product=DedA family protein;protein_id=WP_002212173.1;transl_table=11 NZ_CPUY01000019.1 RefSeq gene 5909 6802 . - . ID=gene-AD853_RS15810;Name=AD853_RS15810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS15810;old_locus_tag=ERS008462_03197 NZ_CPUY01000019.1 Protein Homology CDS 5909 6802 . - 0 ID=cds-WP_002213786.1;Parent=gene-AD853_RS15810;Dbxref=GenBank:WP_002213786.1;Name=WP_002213786.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015683747.1;locus_tag=AD853_RS15810;product=AraC family transcriptional regulator;protein_id=WP_002213786.1;transl_table=11 NZ_CPUY01000019.1 RefSeq gene 7199 8356 . + . ID=gene-AD853_RS15815;Name=yqhD;gbkey=Gene;gene=yqhD;gene_biotype=protein_coding;locus_tag=AD853_RS15815;old_locus_tag=ERS008462_03198 NZ_CPUY01000019.1 Protein Homology CDS 7199 8356 . + 0 ID=cds-WP_002212174.1;Parent=gene-AD853_RS15815;Dbxref=GenBank:WP_002212174.1;Name=WP_002212174.1;Ontology_term=GO:0046872,GO:1990362;gbkey=CDS;gene=yqhD;go_function=metal ion binding|0046872||IEA,butanol dehydrogenase (NAD+) activity|1990362||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004703098.1;locus_tag=AD853_RS15815;product=alcohol dehydrogenase;protein_id=WP_002212174.1;transl_table=11 NZ_CPUY01000019.1 RefSeq pseudogene 8419 8628 . - . ID=gene-AD853_RS15820;Name=AD853_RS15820;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD853_RS15820;pseudo=true NZ_CPUY01000019.1 Protein Homology CDS 8419 8628 . - 0 ID=cds-AD853_RS15820;Parent=gene-AD853_RS15820;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002216186.1;locus_tag=AD853_RS15820;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CPUY01000019.1 RefSeq gene 8775 9608 . + . ID=gene-AD853_RS15825;Name=dkgA;gbkey=Gene;gene=dkgA;gene_biotype=protein_coding;locus_tag=AD853_RS15825;old_locus_tag=ERS008462_03199 NZ_CPUY01000019.1 Protein Homology CDS 8775 9608 . + 0 ID=cds-WP_032466721.1;Parent=gene-AD853_RS15825;Dbxref=GenBank:WP_032466721.1;Name=WP_032466721.1;Ontology_term=GO:0050580;gbkey=CDS;gene=dkgA;go_function=2%2C5-didehydrogluconate reductase activity|0050580||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212175.1;locus_tag=AD853_RS15825;product=2%2C5-didehydrogluconate reductase DkgA;protein_id=WP_032466721.1;transl_table=11 NZ_CPUY01000019.1 RefSeq gene 9630 11993 . - . ID=gene-AD853_RS15830;Name=AD853_RS15830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS15830;old_locus_tag=ERS008462_03200 NZ_CPUY01000019.1 Protein Homology CDS 9630 11993 . - 0 ID=cds-WP_038824389.1;Parent=gene-AD853_RS15830;Dbxref=GenBank:WP_038824389.1;Name=WP_038824389.1;Ontology_term=GO:1904047;gbkey=CDS;go_function=S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011193093.1;locus_tag=AD853_RS15830;product=YgiQ family radical SAM protein;protein_id=WP_038824389.1;transl_table=11 NZ_CPUY01000019.1 RefSeq gene 12438 12893 . + . ID=gene-AD853_RS15835;Name=AD853_RS15835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS15835;old_locus_tag=ERS008462_03201 NZ_CPUY01000019.1 GeneMarkS-2+ CDS 12438 12893 . + 0 ID=cds-WP_038400835.1;Parent=gene-AD853_RS15835;Dbxref=GenBank:WP_038400835.1;Name=WP_038400835.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AD853_RS15835;product=hypothetical protein;protein_id=WP_038400835.1;transl_table=11 NZ_CPUY01000019.1 RefSeq gene 12890 13438 . + . ID=gene-AD853_RS15840;Name=AD853_RS15840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS15840;old_locus_tag=ERS008462_03202 NZ_CPUY01000019.1 GeneMarkS-2+ CDS 12890 13438 . + 0 ID=cds-WP_032466724.1;Parent=gene-AD853_RS15840;Dbxref=GenBank:WP_032466724.1;Name=WP_032466724.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AD853_RS15840;product=hypothetical protein;protein_id=WP_032466724.1;transl_table=11 NZ_CPUY01000019.1 RefSeq gene 13716 15140 . - . ID=gene-AD853_RS15845;Name=ftsP;gbkey=Gene;gene=ftsP;gene_biotype=protein_coding;locus_tag=AD853_RS15845;old_locus_tag=ERS008462_03203 NZ_CPUY01000019.1 Protein Homology CDS 13716 15140 . - 0 ID=cds-WP_002212176.1;Parent=gene-AD853_RS15845;Dbxref=GenBank:WP_002212176.1;Name=WP_002212176.1;Ontology_term=GO:0043093,GO:0016491;gbkey=CDS;gene=ftsP;go_function=oxidoreductase activity|0016491||IEA;go_process=FtsZ-dependent cytokinesis|0043093||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002230599.1;locus_tag=AD853_RS15845;product=cell division protein FtsP;protein_id=WP_002212176.1;transl_table=11 NZ_CPUY01000019.1 RefSeq gene 15319 16050 . - . ID=gene-AD853_RS15850;Name=AD853_RS15850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS15850;old_locus_tag=ERS008462_03204 NZ_CPUY01000019.1 Protein Homology CDS 15319 16050 . - 0 ID=cds-WP_002212177.1;Parent=gene-AD853_RS15850;Dbxref=GenBank:WP_002212177.1;Name=WP_002212177.1;Ontology_term=GO:0008654,GO:0003841,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=1-acylglycerol-3-phosphate O-acyltransferase activity|0003841||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002223690.1;locus_tag=AD853_RS15850;product=1-acylglycerol-3-phosphate O-acyltransferase;protein_id=WP_002212177.1;transl_table=11 NZ_CPUY01000019.1 RefSeq gene 16339 18612 . - . ID=gene-AD853_RS15855;Name=parC;gbkey=Gene;gene=parC;gene_biotype=protein_coding;locus_tag=AD853_RS15855;old_locus_tag=ERS008462_03205 NZ_CPUY01000019.1 Protein Homology CDS 16339 18612 . - 0 ID=cds-WP_038824390.1;Parent=gene-AD853_RS15855;Dbxref=GenBank:WP_038824390.1;Name=WP_038824390.1;Ontology_term=GO:0006265,GO:0003918,GO:0009340;gbkey=CDS;gene=parC;go_component=DNA topoisomerase IV complex|0009340||IEA;go_function=DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011906164.1;locus_tag=AD853_RS15855;product=DNA topoisomerase IV subunit A;protein_id=WP_038824390.1;transl_table=11 NZ_CPUY01000019.1 RefSeq gene 18595 18843 . + . ID=gene-AD853_RS15860;Name=AD853_RS15860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS15860 NZ_CPUY01000019.1 Protein Homology CDS 18595 18843 . + 0 ID=cds-WP_002216196.1;Parent=gene-AD853_RS15860;Dbxref=GenBank:WP_002216196.1;Name=WP_002216196.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002216196.1;locus_tag=AD853_RS15860;product=hypothetical protein;protein_id=WP_002216196.1;transl_table=11 NZ_CPUY01000019.1 RefSeq gene 18916 19500 . + . ID=gene-AD853_RS15865;Name=AD853_RS15865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS15865;old_locus_tag=ERS008462_03206 NZ_CPUY01000019.1 Protein Homology CDS 18916 19500 . + 0 ID=cds-WP_002212179.1;Parent=gene-AD853_RS15865;Dbxref=GenBank:WP_002212179.1;Name=WP_002212179.1;Ontology_term=GO:0008753,GO:0009055,GO:0010181,GO:0050136;gbkey=CDS;go_function=NADPH dehydrogenase (quinone) activity|0008753||IEA,electron transfer activity|0009055||IEA,FMN binding|0010181||IEA,NADH dehydrogenase (quinone) (non-electrogenic) activity|0050136||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012303544.1;locus_tag=AD853_RS15865;product=NAD(P)H-dependent oxidoreductase;protein_id=WP_002212179.1;transl_table=11 NZ_CPUY01000019.1 RefSeq gene 19558 20469 . - . ID=gene-AD853_RS15870;Name=AD853_RS15870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS15870;old_locus_tag=ERS008462_03207 NZ_CPUY01000019.1 Protein Homology CDS 19558 20469 . - 0 ID=cds-WP_011193094.1;Parent=gene-AD853_RS15870;Dbxref=GenBank:WP_011193094.1;Name=WP_011193094.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212180.1;locus_tag=AD853_RS15870;product=LysR family transcriptional regulator;protein_id=WP_011193094.1;transl_table=11 NZ_CPUY01000019.1 RefSeq gene 20473 22368 . - . ID=gene-AD853_RS15875;Name=parE;gbkey=Gene;gene=parE;gene_biotype=protein_coding;locus_tag=AD853_RS15875;old_locus_tag=ERS008462_03208 NZ_CPUY01000019.1 Protein Homology CDS 20473 22368 . - 0 ID=cds-WP_002212181.1;Parent=gene-AD853_RS15875;Dbxref=GenBank:WP_002212181.1;Name=WP_002212181.1;Ontology_term=GO:0006265,GO:0003677,GO:0003918,GO:0005524,GO:0005694;gbkey=CDS;gene=parE;go_component=chromosome|0005694||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA,ATP binding|0005524||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016257886.1;locus_tag=AD853_RS15875;product=DNA topoisomerase IV subunit B;protein_id=WP_002212181.1;transl_table=11 NZ_CPUY01000019.1 RefSeq gene 22470 23051 . - . ID=gene-AD853_RS15880;Name=yqiA;gbkey=Gene;gene=yqiA;gene_biotype=protein_coding;locus_tag=AD853_RS15880;old_locus_tag=ERS008462_03209 NZ_CPUY01000019.1 Protein Homology CDS 22470 23051 . - 0 ID=cds-WP_011193096.1;Parent=gene-AD853_RS15880;Dbxref=GenBank:WP_011193096.1;Name=WP_011193096.1;gbkey=CDS;gene=yqiA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212182.1;locus_tag=AD853_RS15880;product=esterase YqiA;protein_id=WP_011193096.1;transl_table=11 NZ_CPUY01000019.1 RefSeq pseudogene 23051 23879 . - . ID=gene-AD853_RS15885;Name=cpdA;gbkey=Gene;gene=cpdA;gene_biotype=pseudogene;locus_tag=AD853_RS15885;old_locus_tag=ERS008462_03210;pseudo=true NZ_CPUY01000019.1 Protein Homology CDS 23051 23879 . - 0 ID=cds-AD853_RS15885;Parent=gene-AD853_RS15885;Note=frameshifted;Ontology_term=GO:0004115;gbkey=CDS;gene=cpdA;go_function=3'%2C5'-cyclic-AMP phosphodiesterase activity|0004115||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005180337.1;locus_tag=AD853_RS15885;product=3'%2C5'-cyclic-AMP phosphodiesterase;pseudo=true;transl_table=11 NZ_CPUY01000019.1 RefSeq gene 23960 24385 . - . ID=gene-AD853_RS15890;Name=AD853_RS15890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS15890;old_locus_tag=ERS008462_03211 NZ_CPUY01000019.1 Protein Homology CDS 23960 24385 . - 0 ID=cds-WP_002212183.1;Parent=gene-AD853_RS15890;Dbxref=GenBank:WP_002212183.1;Name=WP_002212183.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005188305.1;locus_tag=AD853_RS15890;product=DUF1249 family protein;protein_id=WP_002212183.1;transl_table=11 NZ_CPUY01000019.1 RefSeq gene 24419 25051 . - . ID=gene-AD853_RS15895;Name=nudF;gbkey=Gene;gene=nudF;gene_biotype=protein_coding;locus_tag=AD853_RS15895;old_locus_tag=ERS008462_03212 NZ_CPUY01000019.1 Protein Homology CDS 24419 25051 . - 0 ID=cds-WP_038824392.1;Parent=gene-AD853_RS15895;Dbxref=GenBank:WP_038824392.1;Name=WP_038824392.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;gene=nudF;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212184.1;locus_tag=AD853_RS15895;product=ADP-ribose diphosphatase;protein_id=WP_038824392.1;transl_table=11 NZ_CPUY01000019.1 RefSeq gene 25447 26841 . + . ID=gene-AD853_RS15900;Name=tolC;gbkey=Gene;gene=tolC;gene_biotype=protein_coding;locus_tag=AD853_RS15900;old_locus_tag=ERS008462_03213 NZ_CPUY01000019.1 Protein Homology CDS 25447 26841 . + 0 ID=cds-WP_011193098.1;Parent=gene-AD853_RS15900;Dbxref=GenBank:WP_011193098.1;Name=WP_011193098.1;Ontology_term=GO:0055085,GO:0015562;gbkey=CDS;gene=tolC;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212186.1;locus_tag=AD853_RS15900;product=outer membrane channel protein TolC;protein_id=WP_011193098.1;transl_table=11 NZ_CPUY01000019.1 RefSeq gene 27145 27828 . + . ID=gene-AD853_RS15910;Name=AD853_RS15910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS15910;old_locus_tag=ERS008462_03215 NZ_CPUY01000019.1 Protein Homology CDS 27145 27828 . + 0 ID=cds-WP_002357252.1;Parent=gene-AD853_RS15910;Dbxref=GenBank:WP_002357252.1;Name=WP_002357252.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002357252.1;locus_tag=AD853_RS15910;product=DUF1190 family protein;protein_id=WP_002357252.1;transl_table=11 NZ_CPUY01000019.1 RefSeq gene 27838 28998 . + . ID=gene-AD853_RS15915;Name=AD853_RS15915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS15915;old_locus_tag=ERS008462_03216 NZ_CPUY01000019.1 Protein Homology CDS 27838 28998 . + 0 ID=cds-WP_038824394.1;Parent=gene-AD853_RS15915;Dbxref=GenBank:WP_038824394.1;Name=WP_038824394.1;Ontology_term=GO:0005524,GO:0016874,GO:0046872;gbkey=CDS;go_function=ATP binding|0005524||IEA,ligase activity|0016874||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013814624.1;locus_tag=AD853_RS15915;product=glutathionylspermidine synthase family protein;protein_id=WP_038824394.1;transl_table=11 NZ_CPUY01000019.1 RefSeq gene 29159 29941 . - . ID=gene-AD853_RS15920;Name=ygiD;gbkey=Gene;gene=ygiD;gene_biotype=protein_coding;locus_tag=AD853_RS15920;old_locus_tag=ERS008462_03217 NZ_CPUY01000019.1 Protein Homology CDS 29159 29941 . - 0 ID=cds-WP_002212189.1;Parent=gene-AD853_RS15920;Dbxref=GenBank:WP_002212189.1;Name=WP_002212189.1;gbkey=CDS;gene=ygiD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212189.1;locus_tag=AD853_RS15920;product=4%2C5-DOPA-extradiol-dioxygenase;protein_id=WP_002212189.1;transl_table=11 NZ_CPUY01000019.1 RefSeq gene 30383 31036 . - . ID=gene-AD853_RS15925;Name=ribB;gbkey=Gene;gene=ribB;gene_biotype=protein_coding;locus_tag=AD853_RS15925;old_locus_tag=ERS008462_03218 NZ_CPUY01000019.1 Protein Homology CDS 30383 31036 . - 0 ID=cds-WP_002212190.1;Parent=gene-AD853_RS15925;Dbxref=GenBank:WP_002212190.1;Name=WP_002212190.1;Ontology_term=GO:0008686;gbkey=CDS;gene=ribB;go_function=3%2C4-dihydroxy-2-butanone-4-phosphate synthase activity|0008686||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212190.1;locus_tag=AD853_RS15925;product=3%2C4-dihydroxy-2-butanone-4-phosphate synthase;protein_id=WP_002212190.1;transl_table=11 NZ_CPUY01000019.1 cmsearch riboswitch 31279 31468 . - . ID=id-NZ_CPUY01000019.1:31279..31468;Dbxref=RFAM:RF00050;Note=FMN riboswitch;bound_moiety=flavin mononucleotide;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_CPUY01000019.1 RefSeq gene 31606 31887 . + . ID=gene-AD853_RS15935;Name=ubiK;gbkey=Gene;gene=ubiK;gene_biotype=protein_coding;gene_synonym=yqiC;locus_tag=AD853_RS15935;old_locus_tag=ERS008462_03220 NZ_CPUY01000019.1 Protein Homology CDS 31606 31887 . + 0 ID=cds-WP_002212191.1;Parent=gene-AD853_RS15935;Dbxref=GenBank:WP_002212191.1;Name=WP_002212191.1;Ontology_term=GO:0006744,GO:0042802;gbkey=CDS;gene=ubiK;go_function=identical protein binding|0042802||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212191.1;locus_tag=AD853_RS15935;product=ubiquinone biosynthesis accessory factor UbiK;protein_id=WP_002212191.1;transl_table=11 NZ_CPUY01000019.1 RefSeq gene 32100 32243 . + . ID=gene-AD853_RS22700;Name=AD853_RS22700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS22700 NZ_CPUY01000019.1 Protein Homology CDS 32100 32243 . + 0 ID=cds-WP_071525823.1;Parent=gene-AD853_RS22700;Dbxref=GenBank:WP_071525823.1;Name=WP_071525823.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002378124.1;locus_tag=AD853_RS22700;product=gluconate 5-dehydrogenase;protein_id=WP_071525823.1;transl_table=11 NZ_CPUY01000019.1 RefSeq gene 32212 33462 . - . ID=gene-AD853_RS15940;Name=yjeH;gbkey=Gene;gene=yjeH;gene_biotype=protein_coding;locus_tag=AD853_RS15940;old_locus_tag=ERS008462_03221 NZ_CPUY01000019.1 Protein Homology CDS 32212 33462 . - 0 ID=cds-WP_002212192.1;Parent=gene-AD853_RS15940;Dbxref=GenBank:WP_002212192.1;Name=WP_002212192.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=yjeH;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212192.1;locus_tag=AD853_RS15940;product=L-methionine/branched-chain amino acid transporter;protein_id=WP_002212192.1;transl_table=11 NZ_CPUY01000019.1 RefSeq gene 33499 34929 . - . ID=gene-AD853_RS15945;Name=hldE;gbkey=Gene;gene=hldE;gene_biotype=protein_coding;locus_tag=AD853_RS15945;old_locus_tag=ERS008462_03222 NZ_CPUY01000019.1 Protein Homology CDS 33499 34929 . - 0 ID=cds-WP_011193099.1;Parent=gene-AD853_RS15945;Dbxref=GenBank:WP_011193099.1;Name=WP_011193099.1;Ontology_term=GO:0005975,GO:0009058,GO:0016779;gbkey=CDS;gene=hldE;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=carbohydrate metabolic process|0005975||IEA,biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019082324.1;locus_tag=AD853_RS15945;product=bifunctional D-glycero-beta-D-manno-heptose-7-phosphate kinase/D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase HldE;protein_id=WP_011193099.1;transl_table=11 NZ_CPUY01000019.1 RefSeq gene 35064 37919 . - . ID=gene-AD853_RS15950;Name=glnE;gbkey=Gene;gene=glnE;gene_biotype=protein_coding;locus_tag=AD853_RS15950;old_locus_tag=ERS008462_03223 NZ_CPUY01000019.1 Protein Homology CDS 35064 37919 . - 0 ID=cds-WP_002212194.1;Parent=gene-AD853_RS15950;Dbxref=GenBank:WP_002212194.1;Name=WP_002212194.1;Ontology_term=GO:0008882;gbkey=CDS;gene=glnE;go_function=[glutamate-ammonia-ligase] adenylyltransferase activity|0008882||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012303540.1;locus_tag=AD853_RS15950;product=bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase;protein_id=WP_002212194.1;transl_table=11 NZ_CPUY01000019.1 RefSeq gene 38091 39398 . - . ID=gene-AD853_RS15955;Name=AD853_RS15955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS15955;old_locus_tag=ERS008462_03224 NZ_CPUY01000019.1 Protein Homology CDS 38091 39398 . - 0 ID=cds-WP_002212195.1;Parent=gene-AD853_RS15955;Dbxref=GenBank:WP_002212195.1;Name=WP_002212195.1;Ontology_term=GO:0046872,GO:0050355;gbkey=CDS;go_function=metal ion binding|0046872||IEA,inorganic triphosphate phosphatase activity|0050355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013650449.1;locus_tag=AD853_RS15955;product=CYTH domain-containing protein;protein_id=WP_002212195.1;transl_table=11 NZ_CPUY01000019.1 RefSeq gene 39702 40322 . + . ID=gene-AD853_RS15960;Name=AD853_RS15960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS15960;old_locus_tag=ERS008462_03225 NZ_CPUY01000019.1 Protein Homology CDS 39702 40322 . + 0 ID=cds-WP_011193100.1;Parent=gene-AD853_RS15960;Dbxref=GenBank:WP_011193100.1;Name=WP_011193100.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005271065.1;locus_tag=AD853_RS15960;product=TIGR04211 family SH3 domain-containing protein;protein_id=WP_011193100.1;transl_table=11 NZ_CPUY01000019.1 RefSeq gene 40482 41720 . + . ID=gene-AD853_RS15965;Name=AD853_RS15965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS15965;old_locus_tag=ERS008462_03226 NZ_CPUY01000019.1 Protein Homology CDS 40482 41720 . + 0 ID=cds-WP_011193101.1;Parent=gene-AD853_RS15965;Dbxref=GenBank:WP_011193101.1;Name=WP_011193101.1;Ontology_term=GO:0001680,GO:0003723,GO:0004810,GO:0005524;gbkey=CDS;go_function=RNA binding|0003723||IEA,CCA tRNA nucleotidyltransferase activity|0004810||IEA,ATP binding|0005524||IEA;go_process=tRNA 3'-terminal CCA addition|0001680||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212197.1;locus_tag=AD853_RS15965;product=multifunctional CCA addition/repair protein;protein_id=WP_011193101.1;transl_table=11 NZ_CPUY01000019.1 RefSeq gene 41956 42774 . - . ID=gene-AD853_RS15970;Name=bacA;gbkey=Gene;gene=bacA;gene_biotype=protein_coding;locus_tag=AD853_RS15970;old_locus_tag=ERS008462_03227 NZ_CPUY01000019.1 Protein Homology CDS 41956 42774 . - 0 ID=cds-WP_002212198.1;Parent=gene-AD853_RS15970;Dbxref=GenBank:WP_002212198.1;Name=WP_002212198.1;Ontology_term=GO:0016311,GO:0050380,GO:0016020;gbkey=CDS;gene=bacA;go_component=membrane|0016020||IEA;go_function=undecaprenyl-diphosphatase activity|0050380||IEA;go_process=dephosphorylation|0016311||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004704480.1;locus_tag=AD853_RS15970;product=undecaprenyl-diphosphate phosphatase;protein_id=WP_002212198.1;transl_table=11 NZ_CPUY01000019.1 RefSeq gene 43048 43407 . - . ID=gene-AD853_RS15975;Name=folB;gbkey=Gene;gene=folB;gene_biotype=protein_coding;locus_tag=AD853_RS15975;old_locus_tag=ERS008462_03228 NZ_CPUY01000019.1 Protein Homology CDS 43048 43407 . - 0 ID=cds-WP_002212199.1;Parent=gene-AD853_RS15975;Dbxref=GenBank:WP_002212199.1;Name=WP_002212199.1;Ontology_term=GO:0006760,GO:0004150;gbkey=CDS;gene=folB;go_function=dihydroneopterin aldolase activity|0004150||IEA;go_process=folic acid-containing compound metabolic process|0006760||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212199.1;locus_tag=AD853_RS15975;product=bifunctional dihydroneopterin aldolase/7%2C8-dihydroneopterin epimerase;protein_id=WP_002212199.1;transl_table=11 NZ_CPUY01000019.1 RefSeq gene 43515 44165 . + . ID=gene-AD853_RS15980;Name=plsY;gbkey=Gene;gene=plsY;gene_biotype=protein_coding;locus_tag=AD853_RS15980;old_locus_tag=ERS008462_03229 NZ_CPUY01000019.1 Protein Homology CDS 43515 44165 . + 0 ID=cds-WP_002217581.1;Parent=gene-AD853_RS15980;Dbxref=GenBank:WP_002217581.1;Name=WP_002217581.1;Ontology_term=GO:0006654,GO:0008374,GO:0005886;gbkey=CDS;gene=plsY;go_component=plasma membrane|0005886||IEA;go_function=O-acyltransferase activity|0008374||IEA;go_process=phosphatidic acid biosynthetic process|0006654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002217581.1;locus_tag=AD853_RS15980;product=glycerol-3-phosphate 1-O-acyltransferase PlsY;protein_id=WP_002217581.1;transl_table=11 NZ_CPUY01000019.1 RefSeq gene 44356 45369 . - . ID=gene-AD853_RS15985;Name=tsaD;gbkey=Gene;gene=tsaD;gene_biotype=protein_coding;locus_tag=AD853_RS15985;old_locus_tag=ERS008462_03230 NZ_CPUY01000019.1 Protein Homology CDS 44356 45369 . - 0 ID=cds-WP_002212201.1;Parent=gene-AD853_RS15985;Dbxref=GenBank:WP_002212201.1;Name=WP_002212201.1;Ontology_term=GO:0002949;gbkey=CDS;gene=tsaD;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212201.1;locus_tag=AD853_RS15985;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD;protein_id=WP_002212201.1;transl_table=11 NZ_CPUY01000019.1 RefSeq gene 45775 45990 . + . ID=gene-AD853_RS15990;Name=rpsU;gbkey=Gene;gene=rpsU;gene_biotype=protein_coding;locus_tag=AD853_RS15990;old_locus_tag=ERS008462_03231 NZ_CPUY01000019.1 Protein Homology CDS 45775 45990 . + 0 ID=cds-WP_001144069.1;Parent=gene-AD853_RS15990;Dbxref=GenBank:WP_001144069.1;Name=WP_001144069.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsU;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009874014.1;locus_tag=AD853_RS15990;product=30S ribosomal protein S21;protein_id=WP_001144069.1;transl_table=11 NZ_CPUY01000019.1 RefSeq gene 46126 47874 . + . ID=gene-AD853_RS15995;Name=dnaG;gbkey=Gene;gene=dnaG;gene_biotype=protein_coding;locus_tag=AD853_RS15995;old_locus_tag=ERS008462_03232 NZ_CPUY01000019.1 Protein Homology CDS 46126 47874 . + 0 ID=cds-WP_002210358.1;Parent=gene-AD853_RS15995;Dbxref=GenBank:WP_002210358.1;Name=WP_002210358.1;Ontology_term=GO:0006269,GO:0003899;gbkey=CDS;gene=dnaG;go_function=DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA replication%2C synthesis of primer|0006269||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011817223.1;locus_tag=AD853_RS15995;product=DNA primase;protein_id=WP_002210358.1;transl_table=11 NZ_CPUY01000019.1 RefSeq gene 48032 49870 . + . ID=gene-AD853_RS16000;Name=rpoD;gbkey=Gene;gene=rpoD;gene_biotype=protein_coding;locus_tag=AD853_RS16000;old_locus_tag=ERS008462_03233 NZ_CPUY01000019.1 Protein Homology CDS 48032 49870 . + 0 ID=cds-WP_002210359.1;Parent=gene-AD853_RS16000;Dbxref=GenBank:WP_002210359.1;Name=WP_002210359.1;Ontology_term=GO:0006355,GO:0003700,GO:0016987;gbkey=CDS;gene=rpoD;go_function=DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228906.1;locus_tag=AD853_RS16000;product=RNA polymerase sigma factor RpoD;protein_id=WP_002210359.1;transl_table=11 NZ_CPUY01000019.1 RefSeq gene 50066 50142 . + . ID=gene-AD853_RS16005;Name=AD853_RS16005;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD853_RS16005;old_locus_tag=ERS008462_03234 NZ_CPUY01000019.1 tRNAscan-SE tRNA 50066 50142 . + . ID=rna-AD853_RS16005;Parent=gene-AD853_RS16005;anticodon=(pos:50100..50102);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD853_RS16005;product=tRNA-Ile NZ_CPUY01000019.1 tRNAscan-SE exon 50066 50142 . + . ID=exon-AD853_RS16005-1;Parent=rna-AD853_RS16005;anticodon=(pos:50100..50102);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD853_RS16005;product=tRNA-Ile NZ_CPUY01000019.1 RefSeq gene 50388 50990 . - . ID=gene-AD853_RS20890;Name=AD853_RS20890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS20890;old_locus_tag=ERS008462_03235 NZ_CPUY01000019.1 Protein Homology CDS 50388 50990 . - 0 ID=cds-WP_072080845.1;Parent=gene-AD853_RS20890;Dbxref=GenBank:WP_072080845.1;Name=WP_072080845.1;Ontology_term=GO:0051276,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=chromosome organization|0051276||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011055769.1;locus_tag=AD853_RS20890;product=terminase small subunit;protein_id=WP_072080845.1;transl_table=11 NZ_CPUY01000019.1 RefSeq gene 51007 51462 . - . ID=gene-AD853_RS16020;Name=AD853_RS16020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS16020;old_locus_tag=ERS008462_03236 NZ_CPUY01000019.1 Protein Homology CDS 51007 51462 . - 0 ID=cds-WP_024063020.1;Parent=gene-AD853_RS16020;Dbxref=GenBank:WP_024063020.1;Name=WP_024063020.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210360.1;locus_tag=AD853_RS16020;product=YrhA family protein;protein_id=WP_024063020.1;transl_table=11 NZ_CPUY01000019.1 RefSeq gene 51489 51959 . - . ID=gene-AD853_RS16025;Name=AD853_RS16025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS16025;old_locus_tag=ERS008462_03237 NZ_CPUY01000019.1 Protein Homology CDS 51489 51959 . - 0 ID=cds-WP_038823660.1;Parent=gene-AD853_RS16025;Dbxref=GenBank:WP_038823660.1;Name=WP_038823660.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210361.1;locus_tag=AD853_RS16025;product=YrhA family protein;protein_id=WP_038823660.1;transl_table=11 NZ_CPUY01000019.1 RefSeq gene 51968 52936 . - . ID=gene-AD853_RS22290;Name=AD853_RS22290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS22290;old_locus_tag=ERS008462_03238 NZ_CPUY01000019.1 Protein Homology CDS 51968 52936 . - 0 ID=cds-WP_223847733.1;Parent=gene-AD853_RS22290;Dbxref=GenBank:WP_223847733.1;Name=WP_223847733.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002371741.1;locus_tag=AD853_RS22290;product=HNH endonuclease signature motif containing protein;protein_id=WP_223847733.1;transl_table=11 NZ_CPUY01000019.1 RefSeq gene 53484 53891 . - . ID=gene-AD853_RS20900;Name=AD853_RS20900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS20900;old_locus_tag=ERS008462_03239 NZ_CPUY01000019.1 Protein Homology CDS 53484 53891 . - 0 ID=cds-WP_012414034.1;Parent=gene-AD853_RS20900;Dbxref=GenBank:WP_012414034.1;Name=WP_012414034.1;Ontology_term=GO:0018117,GO:0005524,GO:0070733;gbkey=CDS;go_function=ATP binding|0005524||IEA,AMPylase activity|0070733||IEA;go_process=protein adenylylation|0018117||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012414034.1;locus_tag=AD853_RS20900;product=Fic/DOC family protein;protein_id=WP_012414034.1;transl_table=11 NZ_CPUY01000019.1 RefSeq gene 53837 54100 . - . ID=gene-AD853_RS22295;Name=AD853_RS22295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS22295;old_locus_tag=ERS008462_03240 NZ_CPUY01000019.1 GeneMarkS-2+ CDS 53837 54100 . - 0 ID=cds-WP_223847774.1;Parent=gene-AD853_RS22295;Dbxref=GenBank:WP_223847774.1;Name=WP_223847774.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AD853_RS22295;product=hypothetical protein;protein_id=WP_223847774.1;transl_table=11 NZ_CPUY01000019.1 RefSeq pseudogene 54363 54466 . - . ID=gene-AD853_RS21620;Name=AD853_RS21620;end_range=54466,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD853_RS21620;partial=true;pseudo=true;start_range=.,54363 NZ_CPUY01000019.1 Protein Homology CDS 54363 54466 . - 0 ID=cds-AD853_RS21620;Parent=gene-AD853_RS21620;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=54466,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_042044076.1;locus_tag=AD853_RS21620;partial=true;product=IS21 family transposase;pseudo=true;start_range=.,54363;transl_table=11 NZ_CPUY01000019.1 RefSeq gene 54491 55423 . - . ID=gene-AD853_RS16055;Name=AD853_RS16055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS16055;old_locus_tag=ERS008462_03241 NZ_CPUY01000019.1 Protein Homology CDS 54491 55423 . - 0 ID=cds-WP_038400819.1;Parent=gene-AD853_RS16055;Dbxref=GenBank:WP_038400819.1;Name=WP_038400819.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210366.1;locus_tag=AD853_RS16055;product=LysR family transcriptional regulator;protein_id=WP_038400819.1;transl_table=11 NZ_CPUY01000019.1 RefSeq gene 55585 56301 . + . ID=gene-AD853_RS16060;Name=AD853_RS16060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS16060;old_locus_tag=ERS008462_03242 NZ_CPUY01000019.1 Protein Homology CDS 55585 56301 . + 0 ID=cds-WP_011193105.1;Parent=gene-AD853_RS16060;Dbxref=GenBank:WP_011193105.1;Name=WP_011193105.1;Ontology_term=GO:0016667;gbkey=CDS;go_function=oxidoreductase activity%2C acting on a sulfur group of donors|0016667||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011193105.1;locus_tag=AD853_RS16060;product=DsbA family protein;protein_id=WP_011193105.1;transl_table=11 NZ_CPUY01000019.1 RefSeq gene 56561 56863 . + . ID=gene-AD853_RS16065;Name=AD853_RS16065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS16065;old_locus_tag=ERS008462_03243 NZ_CPUY01000019.1 Protein Homology CDS 56561 56863 . + 0 ID=cds-WP_002210368.1;Parent=gene-AD853_RS16065;Dbxref=GenBank:WP_002210368.1;Name=WP_002210368.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210368.1;locus_tag=AD853_RS16065;product=monooxygenase;protein_id=WP_002210368.1;transl_table=11 NZ_CPUY01000019.1 RefSeq gene 57078 57482 . - . ID=gene-AD853_RS16070;Name=AD853_RS16070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS16070;old_locus_tag=ERS008462_03244 NZ_CPUY01000019.1 Protein Homology CDS 57078 57482 . - 0 ID=cds-WP_002210369.1;Parent=gene-AD853_RS16070;Dbxref=GenBank:WP_002210369.1;Name=WP_002210369.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210369.1;locus_tag=AD853_RS16070;product=RidA family protein;protein_id=WP_002210369.1;transl_table=11 NZ_CPUY01000019.1 RefSeq gene 57767 58147 . - . ID=gene-AD853_RS16075;Name=AD853_RS16075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS16075;old_locus_tag=ERS008462_03245 NZ_CPUY01000019.1 Protein Homology CDS 57767 58147 . - 0 ID=cds-WP_002210370.1;Parent=gene-AD853_RS16075;Dbxref=GenBank:WP_002210370.1;Name=WP_002210370.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210370.1;locus_tag=AD853_RS16075;product=RidA family protein;protein_id=WP_002210370.1;transl_table=11 NZ_CPUY01000019.1 RefSeq gene 58158 58790 . - . ID=gene-AD853_RS16080;Name=AD853_RS16080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS16080;old_locus_tag=ERS008462_03246 NZ_CPUY01000019.1 Protein Homology CDS 58158 58790 . - 0 ID=cds-WP_011193106.1;Parent=gene-AD853_RS16080;Dbxref=GenBank:WP_011193106.1;Name=WP_011193106.1;Ontology_term=GO:0006355,GO:0007165,GO:0003677,GO:0003700,GO:0005515,GO:0140110;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,protein binding|0005515||IEA,transcription regulator activity|0140110||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011193106.1;locus_tag=AD853_RS16080;product=helix-turn-helix transcriptional regulator;protein_id=WP_011193106.1;transl_table=11 NZ_CPUY01000019.1 RefSeq gene 58924 59361 . - . ID=gene-AD853_RS16085;Name=AD853_RS16085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS16085;old_locus_tag=ERS008462_03247 NZ_CPUY01000019.1 Protein Homology CDS 58924 59361 . - 0 ID=cds-WP_002210371.1;Parent=gene-AD853_RS16085;Dbxref=GenBank:WP_002210371.1;Name=WP_002210371.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210371.1;locus_tag=AD853_RS16085;product=SRPBCC family protein;protein_id=WP_002210371.1;transl_table=11 NZ_CPUY01000019.1 RefSeq gene 59374 60825 . - . ID=gene-AD853_RS16090;Name=AD853_RS16090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS16090;old_locus_tag=ERS008462_03248 NZ_CPUY01000019.1 Protein Homology CDS 59374 60825 . - 0 ID=cds-WP_038823662.1;Parent=gene-AD853_RS16090;Dbxref=GenBank:WP_038823662.1;Name=WP_038823662.1;Ontology_term=GO:0015297,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=antiporter activity|0015297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002214229.1;locus_tag=AD853_RS16090;product=Na+/H+ antiporter NhaC family protein;protein_id=WP_038823662.1;transl_table=11 NZ_CPUY01000019.1 RefSeq gene 60818 62050 . - . ID=gene-AD853_RS16095;Name=AD853_RS16095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS16095;old_locus_tag=ERS008462_03249 NZ_CPUY01000019.1 Protein Homology CDS 60818 62050 . - 0 ID=cds-WP_002210373.1;Parent=gene-AD853_RS16095;Dbxref=GenBank:WP_002210373.1;Name=WP_002210373.1;Ontology_term=GO:0009058,GO:0008483,GO:0030170;gbkey=CDS;go_function=transaminase activity|0008483||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012414036.1;locus_tag=AD853_RS16095;product=pyridoxal phosphate-dependent aminotransferase;protein_id=WP_002210373.1;transl_table=11 NZ_CPUY01000019.1 RefSeq gene 62816 63016 . + . ID=gene-AD853_RS16105;Name=AD853_RS16105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS16105;old_locus_tag=ERS008462_03250 NZ_CPUY01000019.1 Protein Homology CDS 62816 63016 . + 0 ID=cds-WP_038823663.1;Parent=gene-AD853_RS16105;Dbxref=GenBank:WP_038823663.1;Name=WP_038823663.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210374.1;locus_tag=AD853_RS16105;product=hypothetical protein;protein_id=WP_038823663.1;transl_table=11 NZ_CPUY01000019.1 RefSeq gene 63013 63348 . + . ID=gene-AD853_RS16110;Name=AD853_RS16110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS16110;old_locus_tag=ERS008462_03251 NZ_CPUY01000019.1 Protein Homology CDS 63013 63348 . + 0 ID=cds-WP_002214224.1;Parent=gene-AD853_RS16110;Dbxref=GenBank:WP_002214224.1;Name=WP_002214224.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002214224.1;locus_tag=AD853_RS16110;product=YtcA family lipoprotein;protein_id=WP_002214224.1;transl_table=11 NZ_CPUY01000019.1 RefSeq gene 63358 64407 . + . ID=gene-AD853_RS16115;Name=mdtN;gbkey=Gene;gene=mdtN;gene_biotype=protein_coding;locus_tag=AD853_RS16115;old_locus_tag=ERS008462_03252 NZ_CPUY01000019.1 Protein Homology CDS 63358 64407 . + 0 ID=cds-WP_038823664.1;Parent=gene-AD853_RS16115;Dbxref=GenBank:WP_038823664.1;Name=WP_038823664.1;gbkey=CDS;gene=mdtN;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210376.1;locus_tag=AD853_RS16115;product=multidrug transporter subunit MdtN;protein_id=WP_038823664.1;transl_table=11 NZ_CPUY01000019.1 RefSeq gene 64391 66292 . + . ID=gene-AD853_RS16120;Name=AD853_RS16120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS16120;old_locus_tag=ERS008462_03253 NZ_CPUY01000019.1 Protein Homology CDS 64391 66292 . + 0 ID=cds-WP_038823665.1;Parent=gene-AD853_RS16120;Dbxref=GenBank:WP_038823665.1;Name=WP_038823665.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011193109.1;locus_tag=AD853_RS16120;product=FUSC family protein;protein_id=WP_038823665.1;transl_table=11 NZ_CPUY01000019.1 RefSeq gene 66297 67823 . + . ID=gene-AD853_RS16125;Name=AD853_RS16125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS16125;old_locus_tag=ERS008462_03254 NZ_CPUY01000019.1 Protein Homology CDS 66297 67823 . + 0 ID=cds-WP_002214220.1;Parent=gene-AD853_RS16125;Dbxref=GenBank:WP_002214220.1;Name=WP_002214220.1;Ontology_term=GO:0055085,GO:0015562;gbkey=CDS;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004702825.1;locus_tag=AD853_RS16125;product=TolC family protein;protein_id=WP_002214220.1;transl_table=11 NZ_CPUY01000019.1 RefSeq gene 67887 70070 . - . ID=gene-AD853_RS16130;Name=AD853_RS16130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS16130;old_locus_tag=ERS008462_03255 NZ_CPUY01000019.1 Protein Homology CDS 67887 70070 . - 0 ID=cds-WP_012104454.1;Parent=gene-AD853_RS16130;Dbxref=GenBank:WP_012104454.1;Name=WP_012104454.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210379.1;locus_tag=AD853_RS16130;product=glycoside hydrolase family 3 N-terminal domain-containing protein;protein_id=WP_012104454.1;transl_table=11 NZ_CPUY01000019.1 RefSeq gene 70121 70636 . - . ID=gene-AD853_RS16135;Name=AD853_RS16135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS16135;old_locus_tag=ERS008462_03256 NZ_CPUY01000019.1 Protein Homology CDS 70121 70636 . - 0 ID=cds-WP_038823667.1;Parent=gene-AD853_RS16135;Dbxref=GenBank:WP_038823667.1;Name=WP_038823667.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012104453.1;locus_tag=AD853_RS16135;product=hypothetical protein;protein_id=WP_038823667.1;transl_table=11 NZ_CPUY01000019.1 RefSeq gene 70633 71451 . - . ID=gene-AD853_RS16140;Name=AD853_RS16140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS16140;old_locus_tag=ERS008462_03257 NZ_CPUY01000019.1 Protein Homology CDS 70633 71451 . - 0 ID=cds-WP_002210381.1;Parent=gene-AD853_RS16140;Dbxref=GenBank:WP_002210381.1;Name=WP_002210381.1;Ontology_term=GO:0008643,GO:0055085;gbkey=CDS;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011193112.1;locus_tag=AD853_RS16140;product=carbohydrate ABC transporter permease;protein_id=WP_002210381.1;transl_table=11 NZ_CPUY01000019.1 RefSeq gene 71451 72332 . - . ID=gene-AD853_RS16145;Name=AD853_RS16145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS16145;old_locus_tag=ERS008462_03258 NZ_CPUY01000019.1 Protein Homology CDS 71451 72332 . - 0 ID=cds-WP_011193113.1;Parent=gene-AD853_RS16145;Dbxref=GenBank:WP_011193113.1;Name=WP_011193113.1;Ontology_term=GO:0008643,GO:0055085,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011193113.1;locus_tag=AD853_RS16145;product=carbohydrate ABC transporter permease;protein_id=WP_011193113.1;transl_table=11 NZ_CPUY01000019.1 RefSeq gene 72386 73630 . - . ID=gene-AD853_RS16150;Name=AD853_RS16150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS16150;old_locus_tag=ERS008462_03259 NZ_CPUY01000019.1 Protein Homology CDS 72386 73630 . - 0 ID=cds-WP_038823669.1;Parent=gene-AD853_RS16150;Dbxref=GenBank:WP_038823669.1;Name=WP_038823669.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016581109.1;locus_tag=AD853_RS16150;product=extracellular solute-binding protein;protein_id=WP_038823669.1;transl_table=11 NZ_CPUY01000019.1 RefSeq gene 73707 74693 . - . ID=gene-AD853_RS16155;Name=AD853_RS16155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS16155;old_locus_tag=ERS008462_03260 NZ_CPUY01000019.1 Protein Homology CDS 73707 74693 . - 0 ID=cds-WP_011193115.1;Parent=gene-AD853_RS16155;Dbxref=GenBank:WP_011193115.1;Name=WP_011193115.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012229191.1;locus_tag=AD853_RS16155;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_011193115.1;transl_table=11 NZ_CPUY01000019.1 RefSeq gene 74802 78155 . - . ID=gene-AD853_RS16160;Name=AD853_RS16160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS16160;old_locus_tag=ERS008462_03261 NZ_CPUY01000019.1 Protein Homology CDS 74802 78155 . - 0 ID=cds-WP_038823670.1;Parent=gene-AD853_RS16160;Dbxref=GenBank:WP_038823670.1;Name=WP_038823670.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012303513.1;locus_tag=AD853_RS16160;product=cellobiose phosphorylase;protein_id=WP_038823670.1;transl_table=11 NZ_CPUY01000019.1 RefSeq pseudogene 78238 78444 . - . ID=gene-AD853_RS20905;Name=AD853_RS20905;end_range=78444,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD853_RS20905;old_locus_tag=ERS008462_03262;partial=true;pseudo=true NZ_CPUY01000019.1 Protein Homology CDS 78238 78444 . - 0 ID=cds-AD853_RS20905;Parent=gene-AD853_RS20905;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=78444,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002214210.1;locus_tag=AD853_RS20905;partial=true;product=sugar ABC transporter ATP-binding protein;pseudo=true;transl_table=11 NZ_CPUY01000019.1 RefSeq pseudogene 78426 79169 . + . ID=gene-AD853_RS16165;Name=AD853_RS16165;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD853_RS16165;old_locus_tag=ERS008462_03263;partial=true;pseudo=true;start_range=.,78426 NZ_CPUY01000019.1 Protein Homology CDS 78426 79169 . + 0 ID=cds-AD853_RS16165;Parent=gene-AD853_RS16165;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016674197.1;locus_tag=AD853_RS16165;partial=true;product=transporter;pseudo=true;start_range=.,78426;transl_table=11 NZ_CPUY01000019.1 RefSeq gene 79229 81514 . + . ID=gene-AD853_RS16170;Name=yapF;gbkey=Gene;gene=yapF;gene_biotype=protein_coding;locus_tag=AD853_RS16170;old_locus_tag=ERS008462_03264 NZ_CPUY01000019.1 Protein Homology CDS 79229 81514 . + 0 ID=cds-WP_038823671.1;Parent=gene-AD853_RS16170;Dbxref=GenBank:WP_038823671.1;Name=WP_038823671.1;gbkey=CDS;gene=yapF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210389.1;locus_tag=AD853_RS16170;product=autotransporter YapF;protein_id=WP_038823671.1;transl_table=11 NZ_CPUY01000019.1 RefSeq pseudogene 81816 82553 . - . ID=gene-AD853_RS21880;Name=AD853_RS21880;end_range=82553,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD853_RS21880;old_locus_tag=ERS008462_03265;partial=true;pseudo=true;start_range=.,81816 NZ_CPUY01000019.1 Protein Homology CDS 81816 82553 . - 0 ID=cds-AD853_RS21880;Parent=gene-AD853_RS21880;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=82553,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_080987661.1;locus_tag=AD853_RS21880;partial=true;product=hemagglutinin repeat-containing protein;pseudo=true;start_range=.,81816;transl_table=11 NZ_CPUY01000019.1 RefSeq gene 82580 82720 . + . ID=gene-AD853_RS21885;Name=AD853_RS21885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS21885 NZ_CPUY01000019.1 Protein Homology CDS 82580 82720 . + 0 ID=cds-WP_190947792.1;Parent=gene-AD853_RS21885;Dbxref=GenBank:WP_190947792.1;Name=WP_190947792.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019083618.1;locus_tag=AD853_RS21885;product=hypothetical protein;protein_id=WP_190947792.1;transl_table=11 NZ_CPUY01000019.1 RefSeq gene 82763 83068 . - . ID=gene-AD853_RS16180;Name=AD853_RS16180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS16180;old_locus_tag=ERS008462_03266 NZ_CPUY01000019.1 Protein Homology CDS 82763 83068 . - 0 ID=cds-WP_038825336.1;Parent=gene-AD853_RS16180;Dbxref=GenBank:WP_038825336.1;Name=WP_038825336.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012303507.1;locus_tag=AD853_RS16180;product=hypothetical protein;protein_id=WP_038825336.1;transl_table=11 NZ_CPUY01000019.1 RefSeq gene 83076 86839 . - . ID=gene-AD853_RS21355;Name=AD853_RS21355;end_range=86839,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS21355;old_locus_tag=ERS008462_03267;partial=true NZ_CPUY01000019.1 Protein Homology CDS 83076 86839 . - 2 ID=cds-WP_196299231.1;Parent=gene-AD853_RS21355;Dbxref=GenBank:WP_196299231.1;Name=WP_196299231.1;end_range=86839,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_080987661.1;locus_tag=AD853_RS21355;partial=true;product=hemagglutinin repeat-containing protein;protein_id=WP_196299231.1;transl_table=11 ##sequence-region NZ_CPUY01000020.1 1 85904 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=633 NZ_CPUY01000020.1 RefSeq region 1 85904 . + . ID=NZ_CPUY01000020.1:1..85904;Dbxref=taxon:633;collection-date=1900/2008;country=South Africa;gbkey=Src;genome=genomic;isolation-source=not known;mol_type=genomic DNA;nat-host=pig;serovar=O:3;strain=IP32544 NZ_CPUY01000020.1 RefSeq gene 154 1821 . + . ID=gene-AD853_RS16190;Name=glnS;gbkey=Gene;gene=glnS;gene_biotype=protein_coding;locus_tag=AD853_RS16190;old_locus_tag=ERS008462_03268 NZ_CPUY01000020.1 Protein Homology CDS 154 1821 . + 0 ID=cds-WP_002210354.1;Parent=gene-AD853_RS16190;Dbxref=GenBank:WP_002210354.1;Name=WP_002210354.1;Ontology_term=GO:0006425,GO:0000166,GO:0004819,GO:0005524,GO:0005737;gbkey=CDS;gene=glnS;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,glutamine-tRNA ligase activity|0004819||IEA,ATP binding|0005524||IEA;go_process=glutaminyl-tRNA aminoacylation|0006425||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210354.1;locus_tag=AD853_RS16190;product=glutamine--tRNA ligase;protein_id=WP_002210354.1;transl_table=11 NZ_CPUY01000020.1 RefSeq pseudogene 2527 3944 . + . ID=gene-AD853_RS16195;Name=chiP;gbkey=Gene;gene=chiP;gene_biotype=pseudogene;locus_tag=AD853_RS16195;old_locus_tag=ERS008462_03269;pseudo=true NZ_CPUY01000020.1 Protein Homology CDS 2527 3944 . + 0 ID=cds-AD853_RS16195;Parent=gene-AD853_RS16195;Note=frameshifted;Ontology_term=GO:0015774,GO:0052778,GO:0015288;gbkey=CDS;gene=chiP;go_function=porin activity|0015288||IEA;go_process=polysaccharide transport|0015774||IEA,diacetylchitobiose metabolic process|0052778||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210355.1;locus_tag=AD853_RS16195;product=chitoporin ChiP;pseudo=true;transl_table=11 NZ_CPUY01000020.1 RefSeq gene 4272 6947 . + . ID=gene-AD853_RS16200;Name=AD853_RS16200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS16200;old_locus_tag=ERS008462_03271 NZ_CPUY01000020.1 Protein Homology CDS 4272 6947 . + 0 ID=cds-WP_032466169.1;Parent=gene-AD853_RS16200;Dbxref=GenBank:WP_032466169.1;Name=WP_032466169.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004390571.1;locus_tag=AD853_RS16200;product=beta-N-acetylhexosaminidase;protein_id=WP_032466169.1;transl_table=11 NZ_CPUY01000020.1 RefSeq gene 7388 7834 . - . ID=gene-AD853_RS16205;Name=fur;gbkey=Gene;gene=fur;gene_biotype=protein_coding;locus_tag=AD853_RS16205;old_locus_tag=ERS008462_03272 NZ_CPUY01000020.1 Protein Homology CDS 7388 7834 . - 0 ID=cds-WP_011191941.1;Parent=gene-AD853_RS16205;Dbxref=GenBank:WP_011191941.1;Name=WP_011191941.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=fur;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011191941.1;locus_tag=AD853_RS16205;product=ferric iron uptake transcriptional regulator;protein_id=WP_011191941.1;transl_table=11 NZ_CPUY01000020.1 RefSeq gene 8201 8728 . - . ID=gene-AD853_RS16210;Name=fldA;gbkey=Gene;gene=fldA;gene_biotype=protein_coding;locus_tag=AD853_RS16210;old_locus_tag=ERS008462_03273 NZ_CPUY01000020.1 Protein Homology CDS 8201 8728 . - 0 ID=cds-WP_002215386.1;Parent=gene-AD853_RS16210;Dbxref=GenBank:WP_002215386.1;Name=WP_002215386.1;gbkey=CDS;gene=fldA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002215386.1;locus_tag=AD853_RS16210;product=flavodoxin FldA;protein_id=WP_002215386.1;transl_table=11 NZ_CPUY01000020.1 RefSeq gene 8801 9022 . - . ID=gene-AD853_RS22300;Name=AD853_RS22300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS22300 NZ_CPUY01000020.1 Protein Homology CDS 8801 9022 . - 0 ID=cds-WP_002359715.1;Parent=gene-AD853_RS22300;Dbxref=GenBank:WP_002359715.1;Name=WP_002359715.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002359715.1;locus_tag=AD853_RS22300;product=hypothetical protein;protein_id=WP_002359715.1;transl_table=11 NZ_CPUY01000020.1 RefSeq gene 9145 9432 . - . ID=gene-AD853_RS16215;Name=ybfE;gbkey=Gene;gene=ybfE;gene_biotype=protein_coding;locus_tag=AD853_RS16215;old_locus_tag=ERS008462_03274 NZ_CPUY01000020.1 Protein Homology CDS 9145 9432 . - 0 ID=cds-WP_038825066.1;Parent=gene-AD853_RS16215;Dbxref=GenBank:WP_038825066.1;Name=WP_038825066.1;gbkey=CDS;gene=ybfE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212202.1;locus_tag=AD853_RS16215;product=LexA regulated protein;protein_id=WP_038825066.1;transl_table=11 NZ_CPUY01000020.1 RefSeq gene 9763 10530 . - . ID=gene-AD853_RS16225;Name=ybfF;gbkey=Gene;gene=ybfF;gene_biotype=protein_coding;locus_tag=AD853_RS16225;old_locus_tag=ERS008462_03275 NZ_CPUY01000020.1 Protein Homology CDS 9763 10530 . - 0 ID=cds-WP_012304383.1;Parent=gene-AD853_RS16225;Dbxref=GenBank:WP_012304383.1;Name=WP_012304383.1;gbkey=CDS;gene=ybfF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105497.1;locus_tag=AD853_RS16225;product=esterase;protein_id=WP_012304383.1;transl_table=11 NZ_CPUY01000020.1 RefSeq gene 11241 11492 . + . ID=gene-AD853_RS16230;Name=AD853_RS16230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS16230;old_locus_tag=ERS008462_03276 NZ_CPUY01000020.1 Protein Homology CDS 11241 11492 . + 0 ID=cds-WP_002212204.1;Parent=gene-AD853_RS16230;Dbxref=GenBank:WP_002212204.1;Name=WP_002212204.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212204.1;locus_tag=AD853_RS16230;product=hypothetical protein;protein_id=WP_002212204.1;transl_table=11 NZ_CPUY01000020.1 RefSeq pseudogene 11655 11836 . - . ID=gene-AD853_RS16235;Name=AD853_RS16235;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD853_RS16235;pseudo=true NZ_CPUY01000020.1 Protein Homology CDS 11655 11836 . - 0 ID=cds-AD853_RS16235;Parent=gene-AD853_RS16235;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002215393.1;locus_tag=AD853_RS16235;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CPUY01000020.1 RefSeq pseudogene 11922 12182 . - . ID=gene-AD853_RS16240;Name=AD853_RS16240;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD853_RS16240;partial=true;pseudo=true;start_range=.,11922 NZ_CPUY01000020.1 Protein Homology CDS 11922 12182 . - 0 ID=cds-AD853_RS16240;Parent=gene-AD853_RS16240;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006310,GO:0006313,GO:0015074,GO:0032196,GO:0003677,GO:0004803,GO:0046872;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA,metal ion binding|0046872||IEA;go_process=DNA recombination|0006310||IEA,DNA transposition|0006313||IEA,DNA integration|0015074||IEA,transposition|0032196||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611473.1;locus_tag=AD853_RS16240;partial=true;product=transposase;pseudo=true;start_range=.,11922;transl_table=11 NZ_CPUY01000020.1 RefSeq pseudogene 12252 12768 . - . ID=gene-AD853_RS16245;Name=AD853_RS16245;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD853_RS16245;old_locus_tag=ERS008462_03279;partial=true;pseudo=true;start_range=.,12252 NZ_CPUY01000020.1 Protein Homology CDS 12252 12768 . - 0 ID=cds-AD853_RS16245;Parent=gene-AD853_RS16245;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210713.1;locus_tag=AD853_RS16245;partial=true;product=integrase arm-type DNA-binding domain-containing protein;pseudo=true;start_range=.,12252;transl_table=11 NZ_CPUY01000020.1 RefSeq gene 13183 13500 . + . ID=gene-AD853_RS16250;Name=AD853_RS16250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS16250;old_locus_tag=ERS008462_03280 NZ_CPUY01000020.1 Protein Homology CDS 13183 13500 . + 0 ID=cds-WP_050124627.1;Parent=gene-AD853_RS16250;Dbxref=GenBank:WP_050124627.1;Name=WP_050124627.1;Ontology_term=GO:0008219,GO:0004540;gbkey=CDS;go_function=RNA nuclease activity|0004540||IEA;go_process=cell death|0008219||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002215951.1;locus_tag=AD853_RS16250;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_050124627.1;transl_table=11 NZ_CPUY01000020.1 RefSeq gene 13506 13820 . + . ID=gene-AD853_RS16255;Name=AD853_RS16255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS16255;old_locus_tag=ERS008462_03281 NZ_CPUY01000020.1 Protein Homology CDS 13506 13820 . + 0 ID=cds-WP_002210705.1;Parent=gene-AD853_RS16255;Dbxref=GenBank:WP_002210705.1;Name=WP_002210705.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210705.1;locus_tag=AD853_RS16255;product=addiction module antidote protein;protein_id=WP_002210705.1;transl_table=11 NZ_CPUY01000020.1 RefSeq gene 14169 15257 . - . ID=gene-AD853_RS16260;Name=AD853_RS16260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS16260;old_locus_tag=ERS008462_03283 NZ_CPUY01000020.1 Protein Homology CDS 14169 15257 . - 0 ID=cds-WP_038824072.1;Parent=gene-AD853_RS16260;Dbxref=GenBank:WP_038824072.1;Name=WP_038824072.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016674110.1;locus_tag=AD853_RS16260;product=helicase RepA family protein;protein_id=WP_038824072.1;transl_table=11 NZ_CPUY01000020.1 RefSeq gene 15254 16213 . - . ID=gene-AD853_RS16265;Name=AD853_RS16265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS16265;old_locus_tag=ERS008462_03284 NZ_CPUY01000020.1 Protein Homology CDS 15254 16213 . - 0 ID=cds-WP_002215950.1;Parent=gene-AD853_RS16265;Dbxref=GenBank:WP_002215950.1;Name=WP_002215950.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011906363.1;locus_tag=AD853_RS16265;product=toprim domain-containing protein;protein_id=WP_002215950.1;transl_table=11 NZ_CPUY01000020.1 RefSeq gene 16206 16748 . - . ID=gene-AD853_RS22530;Name=AD853_RS22530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS22530 NZ_CPUY01000020.1 Protein Homology CDS 16206 16748 . - 0 ID=cds-WP_002215949.1;Parent=gene-AD853_RS22530;Dbxref=GenBank:WP_002215949.1;Name=WP_002215949.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019082168.1;locus_tag=AD853_RS22530;product=ash family protein;protein_id=WP_002215949.1;transl_table=11 NZ_CPUY01000020.1 RefSeq gene 16748 16948 . - . ID=gene-AD853_RS16275;Name=AD853_RS16275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS16275;old_locus_tag=ERS008462_03287 NZ_CPUY01000020.1 Protein Homology CDS 16748 16948 . - 0 ID=cds-WP_002210709.1;Parent=gene-AD853_RS16275;Dbxref=GenBank:WP_002210709.1;Name=WP_002210709.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210709.1;locus_tag=AD853_RS16275;product=AlpA family transcriptional regulator;protein_id=WP_002210709.1;transl_table=11 NZ_CPUY01000020.1 RefSeq gene 16941 17828 . - . ID=gene-AD853_RS16280;Name=AD853_RS16280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS16280;old_locus_tag=ERS008462_03288 NZ_CPUY01000020.1 Protein Homology CDS 16941 17828 . - 0 ID=cds-WP_002210710.1;Parent=gene-AD853_RS16280;Dbxref=GenBank:WP_002210710.1;Name=WP_002210710.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210710.1;locus_tag=AD853_RS16280;product=integrase domain-containing protein;protein_id=WP_002210710.1;transl_table=11 NZ_CPUY01000020.1 RefSeq gene 17850 18173 . - . ID=gene-AD853_RS16285;Name=AD853_RS16285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS16285 NZ_CPUY01000020.1 Protein Homology CDS 17850 18173 . - 0 ID=cds-WP_011566205.1;Parent=gene-AD853_RS16285;Dbxref=GenBank:WP_011566205.1;Name=WP_011566205.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011566205.1;locus_tag=AD853_RS16285;product=hypothetical protein;protein_id=WP_011566205.1;transl_table=11 NZ_CPUY01000020.1 RefSeq gene 18636 18863 . + . ID=gene-AD853_RS16295;Name=AD853_RS16295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS16295 NZ_CPUY01000020.1 Protein Homology CDS 18636 18863 . + 0 ID=cds-WP_002215946.1;Parent=gene-AD853_RS16295;Dbxref=GenBank:WP_002215946.1;Name=WP_002215946.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002215946.1;locus_tag=AD853_RS16295;product=hypothetical protein;protein_id=WP_002215946.1;transl_table=11 NZ_CPUY01000020.1 RefSeq gene 19025 20695 . - . ID=gene-AD853_RS16300;Name=AD853_RS16300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS16300;old_locus_tag=ERS008462_03290 NZ_CPUY01000020.1 Protein Homology CDS 19025 20695 . - 0 ID=cds-WP_038824074.1;Parent=gene-AD853_RS16300;Dbxref=GenBank:WP_038824074.1;Name=WP_038824074.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002215945.1;locus_tag=AD853_RS16300;product=hypothetical protein;protein_id=WP_038824074.1;transl_table=11 NZ_CPUY01000020.1 RefSeq gene 20746 21834 . - . ID=gene-AD853_RS16305;Name=AD853_RS16305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS16305;old_locus_tag=ERS008462_03291 NZ_CPUY01000020.1 Protein Homology CDS 20746 21834 . - 0 ID=cds-WP_038824076.1;Parent=gene-AD853_RS16305;Dbxref=GenBank:WP_038824076.1;Name=WP_038824076.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019083798.1;locus_tag=AD853_RS16305;product=DUF4297 domain-containing protein;protein_id=WP_038824076.1;transl_table=11 NZ_CPUY01000020.1 RefSeq gene 21913 23112 . - . ID=gene-AD853_RS16310;Name=AD853_RS16310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS16310;old_locus_tag=ERS008462_03292 NZ_CPUY01000020.1 Protein Homology CDS 21913 23112 . - 0 ID=cds-WP_050124628.1;Parent=gene-AD853_RS16310;Dbxref=GenBank:WP_050124628.1;Name=WP_050124628.1;Ontology_term=GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210713.1;locus_tag=AD853_RS16310;product=integrase domain-containing protein;protein_id=WP_050124628.1;transl_table=11 NZ_CPUY01000020.1 RefSeq gene 23306 23669 . - . ID=gene-AD853_RS20945;Name=ssrA;gbkey=Gene;gene=ssrA;gene_biotype=tmRNA;locus_tag=AD853_RS20945;old_locus_tag=ERS008462_03293 NZ_CPUY01000020.1 cmsearch tmRNA 23306 23669 . - . ID=rna-AD853_RS20945;Parent=gene-AD853_RS20945;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD853_RS20945;product=transfer-messenger RNA NZ_CPUY01000020.1 cmsearch exon 23306 23669 . - . ID=exon-AD853_RS20945-1;Parent=rna-AD853_RS20945;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD853_RS20945;product=transfer-messenger RNA NZ_CPUY01000020.1 RefSeq gene 23718 24200 . - . ID=gene-AD853_RS16315;Name=smpB;gbkey=Gene;gene=smpB;gene_biotype=protein_coding;locus_tag=AD853_RS16315;old_locus_tag=ERS008462_03294 NZ_CPUY01000020.1 Protein Homology CDS 23718 24200 . - 0 ID=cds-WP_002210714.1;Parent=gene-AD853_RS16315;Dbxref=GenBank:WP_002210714.1;Name=WP_002210714.1;Ontology_term=GO:0003723;gbkey=CDS;gene=smpB;go_function=RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311509.1;locus_tag=AD853_RS16315;product=SsrA-binding protein SmpB;protein_id=WP_002210714.1;transl_table=11 NZ_CPUY01000020.1 RefSeq gene 24361 24795 . + . ID=gene-AD853_RS16320;Name=AD853_RS16320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS16320;old_locus_tag=ERS008462_03295 NZ_CPUY01000020.1 Protein Homology CDS 24361 24795 . + 0 ID=cds-WP_002210715.1;Parent=gene-AD853_RS16320;Dbxref=GenBank:WP_002210715.1;Name=WP_002210715.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105494.1;locus_tag=AD853_RS16320;product=type II toxin-antitoxin system RatA family toxin;protein_id=WP_002210715.1;transl_table=11 NZ_CPUY01000020.1 RefSeq gene 24788 25072 . + . ID=gene-AD853_RS16325;Name=AD853_RS16325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS16325;old_locus_tag=ERS008462_03296 NZ_CPUY01000020.1 Protein Homology CDS 24788 25072 . + 0 ID=cds-WP_002210716.1;Parent=gene-AD853_RS16325;Dbxref=GenBank:WP_002210716.1;Name=WP_002210716.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012146394.1;locus_tag=AD853_RS16325;product=RnfH family protein;protein_id=WP_002210716.1;transl_table=11 NZ_CPUY01000020.1 RefSeq gene 25222 25563 . - . ID=gene-AD853_RS16330;Name=bamE;gbkey=Gene;gene=bamE;gene_biotype=protein_coding;locus_tag=AD853_RS16330;old_locus_tag=ERS008462_03297 NZ_CPUY01000020.1 Protein Homology CDS 25222 25563 . - 0 ID=cds-WP_002210717.1;Parent=gene-AD853_RS16330;Dbxref=GenBank:WP_002210717.1;Name=WP_002210717.1;gbkey=CDS;gene=bamE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210717.1;locus_tag=AD853_RS16330;product=outer membrane protein assembly factor BamE;protein_id=WP_002210717.1;transl_table=11 NZ_CPUY01000020.1 RefSeq gene 25677 27338 . - . ID=gene-AD853_RS16335;Name=recN;gbkey=Gene;gene=recN;gene_biotype=protein_coding;locus_tag=AD853_RS16335;old_locus_tag=ERS008462_03298 NZ_CPUY01000020.1 Protein Homology CDS 25677 27338 . - 0 ID=cds-WP_002210718.1;Parent=gene-AD853_RS16335;Dbxref=GenBank:WP_002210718.1;Name=WP_002210718.1;Ontology_term=GO:0006281,GO:0006310,GO:0005524;gbkey=CDS;gene=recN;go_function=ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015683564.1;locus_tag=AD853_RS16335;product=DNA repair protein RecN;protein_id=WP_002210718.1;transl_table=11 NZ_CPUY01000020.1 RefSeq gene 27425 28306 . - . ID=gene-AD853_RS16340;Name=nadK;gbkey=Gene;gene=nadK;gene_biotype=protein_coding;locus_tag=AD853_RS16340;old_locus_tag=ERS008462_03299 NZ_CPUY01000020.1 Protein Homology CDS 27425 28306 . - 0 ID=cds-WP_038824916.1;Parent=gene-AD853_RS16340;Dbxref=GenBank:WP_038824916.1;Name=WP_038824916.1;Ontology_term=GO:0003951;gbkey=CDS;gene=nadK;go_function=NAD+ kinase activity|0003951||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019081868.1;locus_tag=AD853_RS16340;product=NAD(+) kinase;protein_id=WP_038824916.1;transl_table=11 NZ_CPUY01000020.1 RefSeq gene 28430 29008 . + . ID=gene-AD853_RS16345;Name=grpE;gbkey=Gene;gene=grpE;gene_biotype=protein_coding;locus_tag=AD853_RS16345;old_locus_tag=ERS008462_03300 NZ_CPUY01000020.1 Protein Homology CDS 28430 29008 . + 0 ID=cds-WP_038824917.1;Parent=gene-AD853_RS16345;Dbxref=GenBank:WP_038824917.1;Name=WP_038824917.1;Ontology_term=GO:0006457,GO:0000774,GO:0042803,GO:0051087;gbkey=CDS;gene=grpE;go_function=adenyl-nucleotide exchange factor activity|0000774||IEA,protein homodimerization activity|0042803||IEA,protein-folding chaperone binding|0051087||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004713984.1;locus_tag=AD853_RS16345;product=nucleotide exchange factor GrpE;protein_id=WP_038824917.1;transl_table=11 NZ_CPUY01000020.1 RefSeq gene 29116 30396 . - . ID=gene-AD853_RS16350;Name=AD853_RS16350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS16350;old_locus_tag=ERS008462_03301 NZ_CPUY01000020.1 Protein Homology CDS 29116 30396 . - 0 ID=cds-WP_038824919.1;Parent=gene-AD853_RS16350;Dbxref=GenBank:WP_038824919.1;Name=WP_038824919.1;Ontology_term=GO:0046912;gbkey=CDS;go_function=acyltransferase activity%2C acyl groups converted into alkyl on transfer|0046912||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005165473.1;locus_tag=AD853_RS16350;product=citrate synthase;protein_id=WP_038824919.1;transl_table=11 NZ_CPUY01000020.1 RefSeq gene 31106 31495 . + . ID=gene-AD853_RS16355;Name=sdhC;gbkey=Gene;gene=sdhC;gene_biotype=protein_coding;gene_synonym=cybA,dhsC;locus_tag=AD853_RS16355 NZ_CPUY01000020.1 Protein Homology CDS 31106 31495 . + 0 ID=cds-WP_002210722.1;Parent=gene-AD853_RS16355;Dbxref=GenBank:WP_002210722.1;Name=WP_002210722.1;Ontology_term=GO:0006099,GO:0000104,GO:0009055,GO:0016020,GO:0045273;gbkey=CDS;gene=sdhC;go_component=membrane|0016020||IEA,respiratory chain complex II (succinate dehydrogenase)|0045273||IEA;go_function=succinate dehydrogenase activity|0000104||IEA,electron transfer activity|0009055||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210722.1;locus_tag=AD853_RS16355;product=succinate dehydrogenase cytochrome b556 subunit;protein_id=WP_002210722.1;transl_table=11 NZ_CPUY01000020.1 RefSeq gene 31489 31836 . + . ID=gene-AD853_RS16360;Name=sdhD;gbkey=Gene;gene=sdhD;gene_biotype=protein_coding;gene_synonym=cybS,dhsD;locus_tag=AD853_RS16360;old_locus_tag=ERS008462_03303 NZ_CPUY01000020.1 Protein Homology CDS 31489 31836 . + 0 ID=cds-WP_002210723.1;Parent=gene-AD853_RS16360;Dbxref=GenBank:WP_002210723.1;Name=WP_002210723.1;gbkey=CDS;gene=sdhD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019082678.1;locus_tag=AD853_RS16360;product=succinate dehydrogenase membrane anchor subunit;protein_id=WP_002210723.1;transl_table=11 NZ_CPUY01000020.1 RefSeq gene 31837 33603 . + . ID=gene-AD853_RS16365;Name=sdhA;gbkey=Gene;gene=sdhA;gene_biotype=protein_coding;locus_tag=AD853_RS16365;old_locus_tag=ERS008462_03304 NZ_CPUY01000020.1 Protein Homology CDS 31837 33603 . + 0 ID=cds-WP_002210724.1;Parent=gene-AD853_RS16365;Dbxref=GenBank:WP_002210724.1;Name=WP_002210724.1;Ontology_term=GO:0006099,GO:0016627,GO:0050660;gbkey=CDS;gene=sdhA;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308775.1;locus_tag=AD853_RS16365;product=succinate dehydrogenase flavoprotein subunit;protein_id=WP_002210724.1;transl_table=11 NZ_CPUY01000020.1 RefSeq gene 33653 34369 . + . ID=gene-AD853_RS16370;Name=AD853_RS16370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS16370;old_locus_tag=ERS008462_03305 NZ_CPUY01000020.1 Protein Homology CDS 33653 34369 . + 0 ID=cds-WP_002210725.1;Parent=gene-AD853_RS16370;Dbxref=GenBank:WP_002210725.1;Name=WP_002210725.1;Ontology_term=GO:0008177,GO:0046872;gbkey=CDS;go_function=succinate dehydrogenase (quinone) activity|0008177||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133276.1;locus_tag=AD853_RS16370;product=succinate dehydrogenase iron-sulfur subunit;protein_id=WP_002210725.1;transl_table=11 NZ_CPUY01000020.1 RefSeq gene 34725 37532 . + . ID=gene-AD853_RS16375;Name=sucA;gbkey=Gene;gene=sucA;gene_biotype=protein_coding;locus_tag=AD853_RS16375;old_locus_tag=ERS008462_03306 NZ_CPUY01000020.1 Protein Homology CDS 34725 37532 . + 0 ID=cds-WP_038824920.1;Parent=gene-AD853_RS16375;Dbxref=GenBank:WP_038824920.1;Name=WP_038824920.1;Ontology_term=GO:0006099,GO:0004591,GO:0030976,GO:0045252;gbkey=CDS;gene=sucA;go_component=oxoglutarate dehydrogenase complex|0045252||IEA;go_function=oxoglutarate dehydrogenase (succinyl-transferring) activity|0004591||IEA,thiamine pyrophosphate binding|0030976||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210726.1;locus_tag=AD853_RS16375;product=2-oxoglutarate dehydrogenase E1 component;protein_id=WP_038824920.1;transl_table=11 NZ_CPUY01000020.1 RefSeq gene 37562 38785 . + . ID=gene-AD853_RS16380;Name=odhB;gbkey=Gene;gene=odhB;gene_biotype=protein_coding;locus_tag=AD853_RS16380;old_locus_tag=ERS008462_03307 NZ_CPUY01000020.1 Protein Homology CDS 37562 38785 . + 0 ID=cds-WP_002210727.1;Parent=gene-AD853_RS16380;Dbxref=GenBank:WP_002210727.1;Name=WP_002210727.1;Ontology_term=GO:0006099,GO:0004149,GO:0045252;gbkey=CDS;gene=odhB;go_component=oxoglutarate dehydrogenase complex|0045252||IEA;go_function=dihydrolipoyllysine-residue succinyltransferase activity|0004149||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308779.1;locus_tag=AD853_RS16380;product=2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase;protein_id=WP_002210727.1;transl_table=11 NZ_CPUY01000020.1 RefSeq gene 38898 40064 . + . ID=gene-AD853_RS16385;Name=sucC;gbkey=Gene;gene=sucC;gene_biotype=protein_coding;locus_tag=AD853_RS16385;old_locus_tag=ERS008462_03308 NZ_CPUY01000020.1 Protein Homology CDS 38898 40064 . + 0 ID=cds-WP_002210728.1;Parent=gene-AD853_RS16385;Dbxref=GenBank:WP_002210728.1;Name=WP_002210728.1;Ontology_term=GO:0006099,GO:0003824,GO:0005524,GO:0046872;gbkey=CDS;gene=sucC;go_function=catalytic activity|0003824||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133271.1;locus_tag=AD853_RS16385;product=ADP-forming succinate--CoA ligase subunit beta;protein_id=WP_002210728.1;transl_table=11 NZ_CPUY01000020.1 RefSeq gene 40064 40936 . + . ID=gene-AD853_RS16390;Name=sucD;gbkey=Gene;gene=sucD;gene_biotype=protein_coding;locus_tag=AD853_RS16390;old_locus_tag=ERS008462_03309 NZ_CPUY01000020.1 Protein Homology CDS 40064 40936 . + 0 ID=cds-WP_002210729.1;Parent=gene-AD853_RS16390;Dbxref=GenBank:WP_002210729.1;Name=WP_002210729.1;Ontology_term=GO:0003824;gbkey=CDS;gene=sucD;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210729.1;locus_tag=AD853_RS16390;product=succinate--CoA ligase subunit alpha;protein_id=WP_002210729.1;transl_table=11 NZ_CPUY01000020.1 RefSeq gene 41704 43272 . + . ID=gene-AD853_RS16395;Name=cydA;gbkey=Gene;gene=cydA;gene_biotype=protein_coding;locus_tag=AD853_RS16395;old_locus_tag=ERS008462_03310 NZ_CPUY01000020.1 Protein Homology CDS 41704 43272 . + 0 ID=cds-WP_002210730.1;Parent=gene-AD853_RS16395;Dbxref=GenBank:WP_002210730.1;Name=WP_002210730.1;Ontology_term=GO:0019646,GO:0009055,GO:0070069;gbkey=CDS;gene=cydA;go_component=cytochrome complex|0070069||IEA;go_function=electron transfer activity|0009055||IEA;go_process=aerobic electron transport chain|0019646||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415261.2;locus_tag=AD853_RS16395;product=cytochrome ubiquinol oxidase subunit I;protein_id=WP_002210730.1;transl_table=11 NZ_CPUY01000020.1 RefSeq gene 43287 44426 . + . ID=gene-AD853_RS16400;Name=cydB;gbkey=Gene;gene=cydB;gene_biotype=protein_coding;locus_tag=AD853_RS16400;old_locus_tag=ERS008462_03311 NZ_CPUY01000020.1 Protein Homology CDS 43287 44426 . + 0 ID=cds-WP_002210731.1;Parent=gene-AD853_RS16400;Dbxref=GenBank:WP_002210731.1;Name=WP_002210731.1;Ontology_term=GO:0016020;gbkey=CDS;gene=cydB;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004393310.1;locus_tag=AD853_RS16400;product=cytochrome d ubiquinol oxidase subunit II;protein_id=WP_002210731.1;transl_table=11 NZ_CPUY01000020.1 RefSeq gene 44439 44573 . + . ID=gene-AD853_RS16405;Name=cydX;gbkey=Gene;gene=cydX;gene_biotype=protein_coding;gene_synonym=ybgT;locus_tag=AD853_RS16405;old_locus_tag=ERS008462_03312 NZ_CPUY01000020.1 Protein Homology CDS 44439 44573 . + 0 ID=cds-WP_002210732.1;Parent=gene-AD853_RS16405;Dbxref=GenBank:WP_002210732.1;Name=WP_002210732.1;Ontology_term=GO:0016682;gbkey=CDS;gene=cydX;go_function=oxidoreductase activity%2C acting on diphenols and related substances as donors%2C oxygen as acceptor|0016682||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210732.1;locus_tag=AD853_RS16405;product=cytochrome bd-I oxidase subunit CydX;protein_id=WP_002210732.1;transl_table=11 NZ_CPUY01000020.1 RefSeq gene 44563 44850 . + . ID=gene-AD853_RS16410;Name=ybgE;gbkey=Gene;gene=ybgE;gene_biotype=protein_coding;locus_tag=AD853_RS16410;old_locus_tag=ERS008462_03313 NZ_CPUY01000020.1 Protein Homology CDS 44563 44850 . + 0 ID=cds-WP_011191945.1;Parent=gene-AD853_RS16410;Dbxref=GenBank:WP_011191945.1;Name=WP_011191945.1;gbkey=CDS;gene=ybgE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011191945.1;locus_tag=AD853_RS16410;product=cyd operon protein YbgE;protein_id=WP_011191945.1;transl_table=11 NZ_CPUY01000020.1 RefSeq gene 44982 45383 . + . ID=gene-AD853_RS16415;Name=ybgC;gbkey=Gene;gene=ybgC;gene_biotype=protein_coding;locus_tag=AD853_RS16415;old_locus_tag=ERS008462_03314 NZ_CPUY01000020.1 Protein Homology CDS 44982 45383 . + 0 ID=cds-WP_002210734.1;Parent=gene-AD853_RS16415;Dbxref=GenBank:WP_002210734.1;Name=WP_002210734.1;gbkey=CDS;gene=ybgC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005165498.1;locus_tag=AD853_RS16415;product=tol-pal system-associated acyl-CoA thioesterase;protein_id=WP_002210734.1;transl_table=11 NZ_CPUY01000020.1 RefSeq gene 45383 46069 . + . ID=gene-AD853_RS16420;Name=tolQ;gbkey=Gene;gene=tolQ;gene_biotype=protein_coding;locus_tag=AD853_RS16420;old_locus_tag=ERS008462_03315 NZ_CPUY01000020.1 Protein Homology CDS 45383 46069 . + 0 ID=cds-WP_002210735.1;Parent=gene-AD853_RS16420;Dbxref=GenBank:WP_002210735.1;Name=WP_002210735.1;gbkey=CDS;gene=tolQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210735.1;locus_tag=AD853_RS16420;product=Tol-Pal system protein TolQ;protein_id=WP_002210735.1;transl_table=11 NZ_CPUY01000020.1 RefSeq gene 46082 46510 . + . ID=gene-AD853_RS16425;Name=tolR;gbkey=Gene;gene=tolR;gene_biotype=protein_coding;locus_tag=AD853_RS16425;old_locus_tag=ERS008462_03316 NZ_CPUY01000020.1 Protein Homology CDS 46082 46510 . + 0 ID=cds-WP_002210736.1;Parent=gene-AD853_RS16425;Dbxref=GenBank:WP_002210736.1;Name=WP_002210736.1;gbkey=CDS;gene=tolR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013357153.1;locus_tag=AD853_RS16425;product=colicin uptake protein TolR;protein_id=WP_002210736.1;transl_table=11 NZ_CPUY01000020.1 RefSeq gene 46622 47782 . + . ID=gene-AD853_RS16430;Name=tolA;gbkey=Gene;gene=tolA;gene_biotype=protein_coding;locus_tag=AD853_RS16430;old_locus_tag=ERS008462_03317 NZ_CPUY01000020.1 Protein Homology CDS 46622 47782 . + 0 ID=cds-WP_038825520.1;Parent=gene-AD853_RS16430;Dbxref=GenBank:WP_038825520.1;Name=WP_038825520.1;Ontology_term=GO:0043213,GO:0019534,GO:0016020;gbkey=CDS;gene=tolA;go_component=membrane|0016020||IEA;go_function=toxin transmembrane transporter activity|0019534||IEA;go_process=bacteriocin transport|0043213||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210737.1;locus_tag=AD853_RS16430;product=cell envelope integrity protein TolA;protein_id=WP_038825520.1;transl_table=11 NZ_CPUY01000020.1 RefSeq gene 47902 49194 . + . ID=gene-AD853_RS16435;Name=tolB;gbkey=Gene;gene=tolB;gene_biotype=protein_coding;locus_tag=AD853_RS16435;old_locus_tag=ERS008462_03318 NZ_CPUY01000020.1 Protein Homology CDS 47902 49194 . + 0 ID=cds-WP_002210738.1;Parent=gene-AD853_RS16435;Dbxref=GenBank:WP_002210738.1;Name=WP_002210738.1;Ontology_term=GO:0017038,GO:0005215,GO:0042597;gbkey=CDS;gene=tolB;go_component=periplasmic space|0042597||IEA;go_function=transporter activity|0005215||IEA;go_process=protein import|0017038||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415268.1;locus_tag=AD853_RS16435;product=Tol-Pal system beta propeller repeat protein TolB;protein_id=WP_002210738.1;transl_table=11 NZ_CPUY01000020.1 RefSeq gene 49245 49751 . + . ID=gene-AD853_RS16440;Name=pal;gbkey=Gene;gene=pal;gene_biotype=protein_coding;locus_tag=AD853_RS16440;old_locus_tag=ERS008462_03319 NZ_CPUY01000020.1 Protein Homology CDS 49245 49751 . + 0 ID=cds-WP_011191946.1;Parent=gene-AD853_RS16440;Dbxref=GenBank:WP_011191946.1;Name=WP_011191946.1;gbkey=CDS;gene=pal;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210739.1;locus_tag=AD853_RS16440;product=peptidoglycan-associated lipoprotein Pal;protein_id=WP_011191946.1;transl_table=11 NZ_CPUY01000020.1 RefSeq gene 49761 50570 . + . ID=gene-AD853_RS16445;Name=cpoB;gbkey=Gene;gene=cpoB;gene_biotype=protein_coding;locus_tag=AD853_RS16445;old_locus_tag=ERS008462_03320 NZ_CPUY01000020.1 Protein Homology CDS 49761 50570 . + 0 ID=cds-WP_002220051.1;Parent=gene-AD853_RS16445;Dbxref=GenBank:WP_002220051.1;Name=WP_002220051.1;Ontology_term=GO:0051301,GO:0070206,GO:0005515;gbkey=CDS;gene=cpoB;go_function=protein binding|0005515||IEA;go_process=cell division|0051301||IEA,protein trimerization|0070206||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210740.1;locus_tag=AD853_RS16445;product=cell division protein CpoB;protein_id=WP_002220051.1;transl_table=11 NZ_CPUY01000020.1 RefSeq gene 50761 50836 . + . ID=gene-AD853_RS16450;Name=AD853_RS16450;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD853_RS16450;old_locus_tag=ERS008462_03321 NZ_CPUY01000020.1 tRNAscan-SE tRNA 50761 50836 . + . ID=rna-AD853_RS16450;Parent=gene-AD853_RS16450;anticodon=(pos:50794..50796);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD853_RS16450;product=tRNA-Lys NZ_CPUY01000020.1 tRNAscan-SE exon 50761 50836 . + . ID=exon-AD853_RS16450-1;Parent=rna-AD853_RS16450;anticodon=(pos:50794..50796);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD853_RS16450;product=tRNA-Lys NZ_CPUY01000020.1 RefSeq gene 50864 50939 . + . ID=gene-AD853_RS16455;Name=AD853_RS16455;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD853_RS16455;old_locus_tag=ERS008462_03322 NZ_CPUY01000020.1 tRNAscan-SE tRNA 50864 50939 . + . ID=rna-AD853_RS16455;Parent=gene-AD853_RS16455;anticodon=(pos:50897..50899);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD853_RS16455;product=tRNA-Lys NZ_CPUY01000020.1 tRNAscan-SE exon 50864 50939 . + . ID=exon-AD853_RS16455-1;Parent=rna-AD853_RS16455;anticodon=(pos:50897..50899);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD853_RS16455;product=tRNA-Lys NZ_CPUY01000020.1 RefSeq gene 50977 51106 . + . ID=gene-AD853_RS20950;Name=AD853_RS20950;gbkey=Gene;gene_biotype=ncRNA;locus_tag=AD853_RS20950 NZ_CPUY01000020.1 cmsearch ncRNA 50977 51106 . + . ID=rna-AD853_RS20950;Parent=gene-AD853_RS20950;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD853_RS20950;product=RtT sRNA NZ_CPUY01000020.1 cmsearch exon 50977 51106 . + . ID=exon-AD853_RS20950-1;Parent=rna-AD853_RS20950;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD853_RS20950;product=RtT sRNA NZ_CPUY01000020.1 RefSeq gene 51406 52467 . + . ID=gene-AD853_RS16465;Name=nadA;gbkey=Gene;gene=nadA;gene_biotype=protein_coding;locus_tag=AD853_RS16465;old_locus_tag=ERS008462_03324 NZ_CPUY01000020.1 Protein Homology CDS 51406 52467 . + 0 ID=cds-WP_038824280.1;Parent=gene-AD853_RS16465;Dbxref=GenBank:WP_038824280.1;Name=WP_038824280.1;Ontology_term=GO:0009435,GO:0008987,GO:0051539;gbkey=CDS;gene=nadA;go_function=quinolinate synthetase A activity|0008987||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=NAD+ biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019454028.1;locus_tag=AD853_RS16465;product=quinolinate synthase NadA;protein_id=WP_038824280.1;transl_table=11 NZ_CPUY01000020.1 RefSeq gene 52589 53314 . + . ID=gene-AD853_RS16470;Name=pnuC;gbkey=Gene;gene=pnuC;gene_biotype=protein_coding;locus_tag=AD853_RS16470;old_locus_tag=ERS008462_03325 NZ_CPUY01000020.1 Protein Homology CDS 52589 53314 . + 0 ID=cds-WP_038824281.1;Parent=gene-AD853_RS16470;Dbxref=GenBank:WP_038824281.1;Name=WP_038824281.1;Ontology_term=GO:0015890,GO:0015663,GO:0016020;gbkey=CDS;gene=pnuC;go_component=membrane|0016020||IEA;go_function=nicotinamide mononucleotide transmembrane transporter activity|0015663||IEA;go_process=nicotinamide mononucleotide transport|0015890||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210742.1;locus_tag=AD853_RS16470;product=nicotinamide riboside transporter PnuC;protein_id=WP_038824281.1;transl_table=11 NZ_CPUY01000020.1 RefSeq gene 53435 54373 . - . ID=gene-AD853_RS16475;Name=zitB;gbkey=Gene;gene=zitB;gene_biotype=protein_coding;locus_tag=AD853_RS16475;old_locus_tag=ERS008462_03326 NZ_CPUY01000020.1 Protein Homology CDS 53435 54373 . - 0 ID=cds-WP_050124629.1;Parent=gene-AD853_RS16475;Dbxref=GenBank:WP_050124629.1;Name=WP_050124629.1;Ontology_term=GO:0006829,GO:0055085,GO:0005385,GO:0016020;gbkey=CDS;gene=zitB;go_component=membrane|0016020||IEA;go_function=zinc ion transmembrane transporter activity|0005385||IEA;go_process=zinc ion transport|0006829||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012413566.1;locus_tag=AD853_RS16475;product=CDF family zinc transporter ZitB;protein_id=WP_050124629.1;transl_table=11 NZ_CPUY01000020.1 RefSeq gene 54822 55874 . + . ID=gene-AD853_RS16480;Name=aroG;gbkey=Gene;gene=aroG;gene_biotype=protein_coding;locus_tag=AD853_RS16480;old_locus_tag=ERS008462_03327 NZ_CPUY01000020.1 Protein Homology CDS 54822 55874 . + 0 ID=cds-WP_002223549.1;Parent=gene-AD853_RS16480;Dbxref=GenBank:WP_002223549.1;Name=WP_002223549.1;gbkey=CDS;gene=aroG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004391570.1;locus_tag=AD853_RS16480;product=3-deoxy-7-phosphoheptulonate synthase AroG;protein_id=WP_002223549.1;transl_table=11 NZ_CPUY01000020.1 RefSeq gene 56036 56788 . - . ID=gene-AD853_RS16485;Name=gpmA;gbkey=Gene;gene=gpmA;gene_biotype=protein_coding;locus_tag=AD853_RS16485;old_locus_tag=ERS008462_03328 NZ_CPUY01000020.1 Protein Homology CDS 56036 56788 . - 0 ID=cds-WP_002210746.1;Parent=gene-AD853_RS16485;Dbxref=GenBank:WP_002210746.1;Name=WP_002210746.1;Ontology_term=GO:0006096,GO:0004619;gbkey=CDS;gene=gpmA;go_function=phosphoglycerate mutase activity|0004619||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000301556.1;locus_tag=AD853_RS16485;product=2%2C3-diphosphoglycerate-dependent phosphoglycerate mutase;protein_id=WP_002210746.1;transl_table=11 NZ_CPUY01000020.1 RefSeq gene 57135 57470 . - . ID=gene-AD853_RS16490;Name=AD853_RS16490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS16490;old_locus_tag=ERS008462_03329 NZ_CPUY01000020.1 Protein Homology CDS 57135 57470 . - 0 ID=cds-WP_011191948.1;Parent=gene-AD853_RS16490;Dbxref=GenBank:WP_011191948.1;Name=WP_011191948.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210747.1;locus_tag=AD853_RS16490;product=PsiF family protein;protein_id=WP_011191948.1;transl_table=11 NZ_CPUY01000020.1 RefSeq gene 57763 58833 . - . ID=gene-AD853_RS16495;Name=galM;gbkey=Gene;gene=galM;gene_biotype=protein_coding;locus_tag=AD853_RS16495;old_locus_tag=ERS008462_03330 NZ_CPUY01000020.1 Protein Homology CDS 57763 58833 . - 0 ID=cds-WP_012105488.1;Parent=gene-AD853_RS16495;Dbxref=GenBank:WP_012105488.1;Name=WP_012105488.1;Ontology_term=GO:0006012,GO:0004034;gbkey=CDS;gene=galM;go_function=aldose 1-epimerase activity|0004034||IEA;go_process=galactose metabolic process|0006012||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011191949.1;locus_tag=AD853_RS16495;product=galactose-1-epimerase;protein_id=WP_012105488.1;transl_table=11 NZ_CPUY01000020.1 RefSeq gene 58827 59978 . - . ID=gene-AD853_RS16500;Name=galK;gbkey=Gene;gene=galK;gene_biotype=protein_coding;locus_tag=AD853_RS16500;old_locus_tag=ERS008462_03331 NZ_CPUY01000020.1 Protein Homology CDS 58827 59978 . - 0 ID=cds-WP_002210748.1;Parent=gene-AD853_RS16500;Dbxref=GenBank:WP_002210748.1;Name=WP_002210748.1;Ontology_term=GO:0006012,GO:0046835,GO:0004335,GO:0005524;gbkey=CDS;gene=galK;go_function=galactokinase activity|0004335||IEA,ATP binding|0005524||IEA;go_process=galactose metabolic process|0006012||IEA,carbohydrate phosphorylation|0046835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004877276.1;locus_tag=AD853_RS16500;product=galactokinase;protein_id=WP_002210748.1;transl_table=11 NZ_CPUY01000020.1 RefSeq gene 59975 61027 . - . ID=gene-AD853_RS16505;Name=galT;gbkey=Gene;gene=galT;gene_biotype=protein_coding;locus_tag=AD853_RS16505;old_locus_tag=ERS008462_03332 NZ_CPUY01000020.1 Protein Homology CDS 59975 61027 . - 0 ID=cds-WP_038824506.1;Parent=gene-AD853_RS16505;Dbxref=GenBank:WP_038824506.1;Name=WP_038824506.1;Ontology_term=GO:0006012,GO:0008108,GO:0008270;gbkey=CDS;gene=galT;go_function=UDP-glucose:hexose-1-phosphate uridylyltransferase activity|0008108||IEA,zinc ion binding|0008270||IEA;go_process=galactose metabolic process|0006012||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210749.1;locus_tag=AD853_RS16505;product=galactose-1-phosphate uridylyltransferase;protein_id=WP_038824506.1;transl_table=11 NZ_CPUY01000020.1 RefSeq gene 61037 62053 . - . ID=gene-AD853_RS16510;Name=galE;gbkey=Gene;gene=galE;gene_biotype=protein_coding;locus_tag=AD853_RS16510;old_locus_tag=ERS008462_03333 NZ_CPUY01000020.1 Protein Homology CDS 61037 62053 . - 0 ID=cds-WP_002230680.1;Parent=gene-AD853_RS16510;Dbxref=GenBank:WP_002230680.1;Name=WP_002230680.1;Ontology_term=GO:0006012,GO:0003978;gbkey=CDS;gene=galE;go_function=UDP-glucose 4-epimerase activity|0003978||IEA;go_process=galactose metabolic process|0006012||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004877274.1;locus_tag=AD853_RS16510;product=UDP-glucose 4-epimerase GalE;protein_id=WP_002230680.1;transl_table=11 NZ_CPUY01000020.1 RefSeq gene 62413 63231 . - . ID=gene-AD853_RS16515;Name=AD853_RS16515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS16515;old_locus_tag=ERS008462_03334 NZ_CPUY01000020.1 Protein Homology CDS 62413 63231 . - 0 ID=cds-WP_038824505.1;Parent=gene-AD853_RS16515;Dbxref=GenBank:WP_038824505.1;Name=WP_038824505.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210751.1;locus_tag=AD853_RS16515;product=CPBP family intramembrane glutamic endopeptidase;protein_id=WP_038824505.1;transl_table=11 NZ_CPUY01000020.1 RefSeq gene 63448 64938 . - . ID=gene-AD853_RS16525;Name=modF;gbkey=Gene;gene=modF;gene_biotype=protein_coding;locus_tag=AD853_RS16525;old_locus_tag=ERS008462_03336 NZ_CPUY01000020.1 Protein Homology CDS 63448 64938 . - 0 ID=cds-WP_038824504.1;Parent=gene-AD853_RS16525;Dbxref=GenBank:WP_038824504.1;Name=WP_038824504.1;Ontology_term=GO:0005524;gbkey=CDS;gene=modF;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016674014.1;locus_tag=AD853_RS16525;product=molybdate ABC transporter ATP-binding protein ModF;protein_id=WP_038824504.1;transl_table=11 NZ_CPUY01000020.1 RefSeq gene 65048 65839 . - . ID=gene-AD853_RS16530;Name=modE;gbkey=Gene;gene=modE;gene_biotype=protein_coding;locus_tag=AD853_RS16530;old_locus_tag=ERS008462_03337 NZ_CPUY01000020.1 Protein Homology CDS 65048 65839 . - 0 ID=cds-WP_002210754.1;Parent=gene-AD853_RS16530;Dbxref=GenBank:WP_002210754.1;Name=WP_002210754.1;Ontology_term=GO:0006355,GO:0015689,GO:0003700,GO:0030151;gbkey=CDS;gene=modE;go_function=DNA-binding transcription factor activity|0003700||IEA,molybdenum ion binding|0030151||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013649518.1;locus_tag=AD853_RS16530;product=molybdenum-dependent transcriptional regulator;protein_id=WP_002210754.1;transl_table=11 NZ_CPUY01000020.1 RefSeq gene 66054 66206 . + . ID=gene-AD853_RS16535;Name=AD853_RS16535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS16535;old_locus_tag=ERS008462_03338 NZ_CPUY01000020.1 Protein Homology CDS 66054 66206 . + 0 ID=cds-WP_002217291.1;Parent=gene-AD853_RS16535;Dbxref=GenBank:WP_002217291.1;Name=WP_002217291.1;Ontology_term=GO:1990961,GO:0042910,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=xenobiotic transmembrane transporter activity|0042910||IEA;go_process=xenobiotic detoxification by transmembrane export across the plasma membrane|1990961||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002217291.1;locus_tag=AD853_RS16535;product=AcrZ family multidrug efflux pump-associated protein;protein_id=WP_002217291.1;transl_table=11 NZ_CPUY01000020.1 RefSeq gene 66457 67236 . + . ID=gene-AD853_RS16540;Name=modA;gbkey=Gene;gene=modA;gene_biotype=protein_coding;locus_tag=AD853_RS16540;old_locus_tag=ERS008462_03339 NZ_CPUY01000020.1 Protein Homology CDS 66457 67236 . + 0 ID=cds-WP_002210756.1;Parent=gene-AD853_RS16540;Dbxref=GenBank:WP_002210756.1;Name=WP_002210756.1;Ontology_term=GO:0015689;gbkey=CDS;gene=modA;go_process=molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210756.1;locus_tag=AD853_RS16540;product=molybdate ABC transporter substrate-binding protein;protein_id=WP_002210756.1;transl_table=11 NZ_CPUY01000020.1 RefSeq gene 67236 67931 . + . ID=gene-AD853_RS16545;Name=modB;gbkey=Gene;gene=modB;gene_biotype=protein_coding;locus_tag=AD853_RS16545;old_locus_tag=ERS008462_03340 NZ_CPUY01000020.1 Protein Homology CDS 67236 67931 . + 0 ID=cds-WP_038825465.1;Parent=gene-AD853_RS16545;Dbxref=GenBank:WP_038825465.1;Name=WP_038825465.1;Ontology_term=GO:0015689,GO:0015098,GO:0016020;gbkey=CDS;gene=modB;go_component=membrane|0016020||IEA;go_function=molybdate ion transmembrane transporter activity|0015098||IEA;go_process=molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012229365.1;locus_tag=AD853_RS16545;product=molybdate ABC transporter permease subunit;protein_id=WP_038825465.1;transl_table=11 NZ_CPUY01000020.1 RefSeq gene 67925 69004 . + . ID=gene-AD853_RS16550;Name=modC;gbkey=Gene;gene=modC;gene_biotype=protein_coding;locus_tag=AD853_RS16550;old_locus_tag=ERS008462_03341 NZ_CPUY01000020.1 Protein Homology CDS 67925 69004 . + 0 ID=cds-WP_011191953.1;Parent=gene-AD853_RS16550;Dbxref=GenBank:WP_011191953.1;Name=WP_011191953.1;Ontology_term=GO:0015689,GO:0005524,GO:0015098,GO:0016020;gbkey=CDS;gene=modC;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,molybdate ion transmembrane transporter activity|0015098||IEA;go_process=molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210758.1;locus_tag=AD853_RS16550;product=molybdenum ABC transporter ATP-binding protein ModC;protein_id=WP_011191953.1;transl_table=11 NZ_CPUY01000020.1 RefSeq gene 69060 69881 . - . ID=gene-AD853_RS16555;Name=AD853_RS16555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS16555;old_locus_tag=ERS008462_03342 NZ_CPUY01000020.1 Protein Homology CDS 69060 69881 . - 0 ID=cds-WP_038824501.1;Parent=gene-AD853_RS16555;Dbxref=GenBank:WP_038824501.1;Name=WP_038824501.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004713393.1;locus_tag=AD853_RS16555;product=pyridoxal phosphatase;protein_id=WP_038824501.1;transl_table=11 NZ_CPUY01000020.1 RefSeq gene 70172 71176 . + . ID=gene-AD853_RS16560;Name=pgl;gbkey=Gene;gene=pgl;gene_biotype=protein_coding;gene_synonym=ybhE;locus_tag=AD853_RS16560;old_locus_tag=ERS008462_03343 NZ_CPUY01000020.1 Protein Homology CDS 70172 71176 . + 0 ID=cds-WP_011191955.1;Parent=gene-AD853_RS16560;Dbxref=GenBank:WP_011191955.1;Name=WP_011191955.1;Ontology_term=GO:0017057;gbkey=CDS;gene=pgl;go_function=6-phosphogluconolactonase activity|0017057||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210760.1;locus_tag=AD853_RS16560;product=6-phosphogluconolactonase;protein_id=WP_011191955.1;transl_table=11 NZ_CPUY01000020.1 RefSeq gene 71361 72641 . - . ID=gene-AD853_RS16565;Name=bioA;gbkey=Gene;gene=bioA;gene_biotype=protein_coding;locus_tag=AD853_RS16565;old_locus_tag=ERS008462_03344 NZ_CPUY01000020.1 Protein Homology CDS 71361 72641 . - 0 ID=cds-WP_002220188.1;Parent=gene-AD853_RS16565;Dbxref=GenBank:WP_002220188.1;Name=WP_002220188.1;Ontology_term=GO:0009102,GO:0004015,GO:0030170;gbkey=CDS;gene=bioA;go_function=adenosylmethionine-8-amino-7-oxononanoate transaminase activity|0004015||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002353917.1;locus_tag=AD853_RS16565;product=adenosylmethionine--8-amino-7-oxononanoate transaminase;protein_id=WP_002220188.1;transl_table=11 NZ_CPUY01000020.1 RefSeq gene 72740 73777 . + . ID=gene-AD853_RS16570;Name=bioB;gbkey=Gene;gene=bioB;gene_biotype=protein_coding;locus_tag=AD853_RS16570;old_locus_tag=ERS008462_03345 NZ_CPUY01000020.1 Protein Homology CDS 72740 73777 . + 0 ID=cds-WP_002210762.1;Parent=gene-AD853_RS16570;Dbxref=GenBank:WP_002210762.1;Name=WP_002210762.1;Ontology_term=GO:0009102,GO:0004076,GO:0051536,GO:1904047;gbkey=CDS;gene=bioB;go_function=biotin synthase activity|0004076||IEA,iron-sulfur cluster binding|0051536||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012005745.1;locus_tag=AD853_RS16570;product=biotin synthase BioB;protein_id=WP_002210762.1;transl_table=11 NZ_CPUY01000020.1 RefSeq gene 73777 74928 . + . ID=gene-AD853_RS16575;Name=bioF;gbkey=Gene;gene=bioF;gene_biotype=protein_coding;locus_tag=AD853_RS16575;old_locus_tag=ERS008462_03346 NZ_CPUY01000020.1 Protein Homology CDS 73777 74928 . + 0 ID=cds-WP_038824500.1;Parent=gene-AD853_RS16575;Dbxref=GenBank:WP_038824500.1;Name=WP_038824500.1;Ontology_term=GO:0009102,GO:0008710;gbkey=CDS;gene=bioF;go_function=8-amino-7-oxononanoate synthase activity|0008710||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105479.1;locus_tag=AD853_RS16575;product=8-amino-7-oxononanoate synthase;protein_id=WP_038824500.1;transl_table=11 NZ_CPUY01000020.1 RefSeq gene 74912 75715 . + . ID=gene-AD853_RS16580;Name=bioC;gbkey=Gene;gene=bioC;gene_biotype=protein_coding;locus_tag=AD853_RS16580;old_locus_tag=ERS008462_03347 NZ_CPUY01000020.1 Protein Homology CDS 74912 75715 . + 0 ID=cds-WP_024063415.1;Parent=gene-AD853_RS16580;Dbxref=GenBank:WP_024063415.1;Name=WP_024063415.1;Ontology_term=GO:0009102,GO:0010340;gbkey=CDS;gene=bioC;go_function=carboxyl-O-methyltransferase activity|0010340||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210764.1;locus_tag=AD853_RS16580;product=malonyl-ACP O-methyltransferase BioC;protein_id=WP_024063415.1;transl_table=11 NZ_CPUY01000020.1 RefSeq gene 75708 76430 . + . ID=gene-AD853_RS16585;Name=bioD;gbkey=Gene;gene=bioD;gene_biotype=protein_coding;locus_tag=AD853_RS16585;old_locus_tag=ERS008462_03348 NZ_CPUY01000020.1 Protein Homology CDS 75708 76430 . + 0 ID=cds-WP_002216554.1;Parent=gene-AD853_RS16585;Dbxref=GenBank:WP_002216554.1;Name=WP_002216554.1;Ontology_term=GO:0009102,GO:0000287,GO:0004141,GO:0005524;gbkey=CDS;gene=bioD;go_function=magnesium ion binding|0000287||IEA,dethiobiotin synthase activity|0004141||IEA,ATP binding|0005524||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105477.1;locus_tag=AD853_RS16585;product=dethiobiotin synthase;protein_id=WP_002216554.1;transl_table=11 NZ_CPUY01000020.1 RefSeq gene 76582 77292 . - . ID=gene-AD853_RS16590;Name=AD853_RS16590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS16590;old_locus_tag=ERS008462_03349 NZ_CPUY01000020.1 Protein Homology CDS 76582 77292 . - 0 ID=cds-WP_002210766.1;Parent=gene-AD853_RS16590;Dbxref=GenBank:WP_002210766.1;Name=WP_002210766.1;Ontology_term=GO:0015803,GO:0005524,GO:0015658,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,branched-chain amino acid transmembrane transporter activity|0015658||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=branched-chain amino acid transport|0015803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105476.1;locus_tag=AD853_RS16590;product=branched-chain amino acid ABC transporter ATP-binding protein;protein_id=WP_002210766.1;transl_table=11 NZ_CPUY01000020.1 RefSeq gene 78383 80398 . + . ID=gene-AD853_RS16595;Name=uvrB;gbkey=Gene;gene=uvrB;gene_biotype=protein_coding;locus_tag=AD853_RS16595;old_locus_tag=ERS008462_03350 NZ_CPUY01000020.1 Protein Homology CDS 78383 80398 . + 0 ID=cds-WP_038824498.1;Parent=gene-AD853_RS16595;Dbxref=GenBank:WP_038824498.1;Name=WP_038824498.1;Ontology_term=GO:0006289,GO:0003677,GO:0005524,GO:0016887,GO:0009380;gbkey=CDS;gene=uvrB;go_component=excinuclease repair complex|0009380||IEA;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012005751.1;locus_tag=AD853_RS16595;product=excinuclease ABC subunit UvrB;protein_id=WP_038824498.1;transl_table=11 NZ_CPUY01000020.1 RefSeq gene 80690 80935 . + . ID=gene-AD853_RS16600;Name=AD853_RS16600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS16600;old_locus_tag=ERS008462_03351 NZ_CPUY01000020.1 Protein Homology CDS 80690 80935 . + 0 ID=cds-WP_016682725.1;Parent=gene-AD853_RS16600;Dbxref=GenBank:WP_016682725.1;Name=WP_016682725.1;Ontology_term=GO:0003677,GO:0003690;gbkey=CDS;go_function=DNA binding|0003677||IEA,double-stranded DNA binding|0003690||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210768.1;locus_tag=AD853_RS16600;product=VF530 family protein;protein_id=WP_016682725.1;transl_table=11 NZ_CPUY01000020.1 RefSeq gene 81066 81989 . - . ID=gene-AD853_RS16605;Name=yvcK;gbkey=Gene;gene=yvcK;gene_biotype=protein_coding;locus_tag=AD853_RS16605;old_locus_tag=ERS008462_03352 NZ_CPUY01000020.1 Protein Homology CDS 81066 81989 . - 0 ID=cds-WP_002210769.1;Parent=gene-AD853_RS16605;Dbxref=GenBank:WP_002210769.1;Name=WP_002210769.1;gbkey=CDS;gene=yvcK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210769.1;locus_tag=AD853_RS16605;product=uridine diphosphate-N-acetylglucosamine-binding protein YvcK;protein_id=WP_002210769.1;transl_table=11 NZ_CPUY01000020.1 cmsearch riboswitch 82388 82534 . + . ID=id-NZ_CPUY01000020.1:82388..82534;Dbxref=RFAM:RF01055;Note=molybdenum cofactor riboswitch;bound_moiety=molybdenum cofactor;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_CPUY01000020.1 RefSeq gene 82521 83501 . + . ID=gene-AD853_RS16615;Name=moaA;gbkey=Gene;gene=moaA;gene_biotype=protein_coding;locus_tag=AD853_RS16615 NZ_CPUY01000020.1 Protein Homology CDS 82521 83501 . + 0 ID=cds-WP_024063414.1;Parent=gene-AD853_RS16615;Dbxref=GenBank:WP_024063414.1;Name=WP_024063414.1;Ontology_term=GO:0006777,GO:0046872,GO:0051539;gbkey=CDS;gene=moaA;go_function=metal ion binding|0046872||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210771.1;locus_tag=AD853_RS16615;product=GTP 3'%2C8-cyclase MoaA;protein_id=WP_024063414.1;transl_table=11 NZ_CPUY01000020.1 RefSeq gene 83724 84203 . + . ID=gene-AD853_RS16620;Name=moaC;gbkey=Gene;gene=moaC;gene_biotype=protein_coding;locus_tag=AD853_RS16620;old_locus_tag=ERS008462_03355 NZ_CPUY01000020.1 Protein Homology CDS 83724 84203 . + 0 ID=cds-WP_002210772.1;Parent=gene-AD853_RS16620;Dbxref=GenBank:WP_002210772.1;Name=WP_002210772.1;Ontology_term=GO:0006777,GO:0061799;gbkey=CDS;gene=moaC;go_function=cyclic pyranopterin monophosphate synthase activity|0061799||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210772.1;locus_tag=AD853_RS16620;product=cyclic pyranopterin monophosphate synthase MoaC;protein_id=WP_002210772.1;transl_table=11 NZ_CPUY01000020.1 RefSeq gene 84200 84445 . + . ID=gene-AD853_RS16625;Name=moaD;gbkey=Gene;gene=moaD;gene_biotype=protein_coding;locus_tag=AD853_RS16625;old_locus_tag=ERS008462_03356 NZ_CPUY01000020.1 Protein Homology CDS 84200 84445 . + 0 ID=cds-WP_002210773.1;Parent=gene-AD853_RS16625;Dbxref=GenBank:WP_002210773.1;Name=WP_002210773.1;Ontology_term=GO:0006777;gbkey=CDS;gene=moaD;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210773.1;locus_tag=AD853_RS16625;product=molybdopterin synthase sulfur carrier subunit;protein_id=WP_002210773.1;transl_table=11 NZ_CPUY01000020.1 RefSeq gene 84448 84900 . + . ID=gene-AD853_RS16630;Name=moaE;gbkey=Gene;gene=moaE;gene_biotype=protein_coding;locus_tag=AD853_RS16630;old_locus_tag=ERS008462_03357 NZ_CPUY01000020.1 Protein Homology CDS 84448 84900 . + 0 ID=cds-WP_002210774.1;Parent=gene-AD853_RS16630;Dbxref=GenBank:WP_002210774.1;Name=WP_002210774.1;Ontology_term=GO:0006777;gbkey=CDS;gene=moaE;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210774.1;locus_tag=AD853_RS16630;product=molybdopterin synthase catalytic subunit MoaE;protein_id=WP_002210774.1;transl_table=11 NZ_CPUY01000020.1 RefSeq gene 85043 85753 . + . ID=gene-AD853_RS16635;Name=AD853_RS16635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS16635;old_locus_tag=ERS008462_03358 NZ_CPUY01000020.1 Protein Homology CDS 85043 85753 . + 0 ID=cds-WP_038824761.1;Parent=gene-AD853_RS16635;Dbxref=GenBank:WP_038824761.1;Name=WP_038824761.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210775.1;locus_tag=AD853_RS16635;product=Bax inhibitor-1/YccA family protein;protein_id=WP_038824761.1;transl_table=11 ##sequence-region NZ_CPUY01000021.1 1 76662 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=633 NZ_CPUY01000021.1 RefSeq region 1 76662 . + . ID=NZ_CPUY01000021.1:1..76662;Dbxref=taxon:633;collection-date=1900/2008;country=South Africa;gbkey=Src;genome=genomic;isolation-source=not known;mol_type=genomic DNA;nat-host=pig;serovar=O:3;strain=IP32544 NZ_CPUY01000021.1 RefSeq gene 334 1725 . + . ID=gene-AD853_RS16640;Name=AD853_RS16640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS16640;old_locus_tag=ERS008462_03360 NZ_CPUY01000021.1 Protein Homology CDS 334 1725 . + 0 ID=cds-WP_038825713.1;Parent=gene-AD853_RS16640;Dbxref=GenBank:WP_038825713.1;Name=WP_038825713.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016588330.1;locus_tag=AD853_RS16640;product=two-partner secretion domain-containing protein;protein_id=WP_038825713.1;transl_table=11 NZ_CPUY01000021.1 RefSeq gene 1917 3596 . + . ID=gene-AD853_RS16645;Name=AD853_RS16645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS16645;old_locus_tag=ERS008462_03361 NZ_CPUY01000021.1 Protein Homology CDS 1917 3596 . + 0 ID=cds-WP_190947794.1;Parent=gene-AD853_RS16645;Dbxref=GenBank:WP_190947794.1;Name=WP_190947794.1;Ontology_term=GO:0006811,GO:0015031,GO:0015288,GO:0046930;gbkey=CDS;go_component=pore complex|0046930||IEA;go_function=porin activity|0015288||IEA;go_process=monoatomic ion transport|0006811||IEA,protein transport|0015031||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002222139.1;locus_tag=AD853_RS16645;product=ShlB/FhaC/HecB family hemolysin secretion/activation protein;protein_id=WP_190947794.1;transl_table=11 NZ_CPUY01000021.1 RefSeq gene 3656 3862 . + . ID=gene-AD853_RS22535;Name=AD853_RS22535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS22535;old_locus_tag=ERS008462_03362 NZ_CPUY01000021.1 Protein Homology CDS 3656 3862 . + 0 ID=cds-WP_038824743.1;Parent=gene-AD853_RS22535;Dbxref=GenBank:WP_038824743.1;Name=WP_038824743.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002217329.1;locus_tag=AD853_RS22535;product=hypothetical protein;protein_id=WP_038824743.1;transl_table=11 NZ_CPUY01000021.1 RefSeq gene 4265 5872 . + . ID=gene-AD853_RS16655;Name=dppA;gbkey=Gene;gene=dppA;gene_biotype=protein_coding;locus_tag=AD853_RS16655;old_locus_tag=ERS008462_03363 NZ_CPUY01000021.1 Protein Homology CDS 4265 5872 . + 0 ID=cds-WP_011193287.1;Parent=gene-AD853_RS16655;Dbxref=GenBank:WP_011193287.1;Name=WP_011193287.1;Ontology_term=GO:0042938,GO:0071916,GO:0030288;gbkey=CDS;gene=dppA;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=dipeptide transmembrane transporter activity|0071916||IEA;go_process=dipeptide transport|0042938||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462532.1;locus_tag=AD853_RS16655;product=dipeptide ABC transporter periplasmic-binding protein DppA;protein_id=WP_011193287.1;transl_table=11 NZ_CPUY01000021.1 RefSeq gene 6155 7174 . + . ID=gene-AD853_RS16660;Name=dppB;gbkey=Gene;gene=dppB;gene_biotype=protein_coding;locus_tag=AD853_RS16660;old_locus_tag=ERS008462_03364 NZ_CPUY01000021.1 Protein Homology CDS 6155 7174 . + 0 ID=cds-WP_002228714.1;Parent=gene-AD853_RS16660;Dbxref=GenBank:WP_002228714.1;Name=WP_002228714.1;gbkey=CDS;gene=dppB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133865.1;locus_tag=AD853_RS16660;product=dipeptide ABC transporter permease DppB;protein_id=WP_002228714.1;transl_table=11 NZ_CPUY01000021.1 RefSeq gene 7185 8087 . + . ID=gene-AD853_RS16665;Name=dppC;gbkey=Gene;gene=dppC;gene_biotype=protein_coding;locus_tag=AD853_RS16665;old_locus_tag=ERS008462_03365 NZ_CPUY01000021.1 Protein Homology CDS 7185 8087 . + 0 ID=cds-WP_038824742.1;Parent=gene-AD853_RS16665;Dbxref=GenBank:WP_038824742.1;Name=WP_038824742.1;Ontology_term=GO:0055085;gbkey=CDS;gene=dppC;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008457611.1;locus_tag=AD853_RS16665;product=dipeptide ABC transporter permease DppC;protein_id=WP_038824742.1;transl_table=11 NZ_CPUY01000021.1 RefSeq gene 8101 9081 . + . ID=gene-AD853_RS16670;Name=dppD;gbkey=Gene;gene=dppD;gene_biotype=protein_coding;locus_tag=AD853_RS16670;old_locus_tag=ERS008462_03366 NZ_CPUY01000021.1 Protein Homology CDS 8101 9081 . + 0 ID=cds-WP_002209562.1;Parent=gene-AD853_RS16670;Dbxref=GenBank:WP_002209562.1;Name=WP_002209562.1;Ontology_term=GO:0015833,GO:0000166,GO:0005524;gbkey=CDS;gene=dppD;go_function=nucleotide binding|0000166||IEA,ATP binding|0005524||IEA;go_process=peptide transport|0015833||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229355.1;locus_tag=AD853_RS16670;product=dipeptide ABC transporter ATP-binding protein;protein_id=WP_002209562.1;transl_table=11 NZ_CPUY01000021.1 RefSeq gene 9117 10154 . + . ID=gene-AD853_RS16675;Name=dppF;gbkey=Gene;gene=dppF;gene_biotype=protein_coding;locus_tag=AD853_RS16675;old_locus_tag=ERS008462_03367 NZ_CPUY01000021.1 Protein Homology CDS 9117 10154 . + 0 ID=cds-WP_196332080.1;Parent=gene-AD853_RS16675;Dbxref=GenBank:WP_196332080.1;Name=WP_196332080.1;Ontology_term=GO:0042938,GO:0071916,GO:0016020;gbkey=CDS;gene=dppF;go_component=membrane|0016020||IEA;go_function=dipeptide transmembrane transporter activity|0071916||IEA;go_process=dipeptide transport|0042938||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209561.1;locus_tag=AD853_RS16675;product=dipeptide ABC transporter ATP-binding subunit DppF;protein_id=WP_196332080.1;transl_table=11 NZ_CPUY01000021.1 RefSeq pseudogene 10244 11358 . + . ID=gene-AD853_RS16680;Name=bcsZ;gbkey=Gene;gene=bcsZ;gene_biotype=pseudogene;locus_tag=AD853_RS16680;old_locus_tag=ERS008462_03369;pseudo=true NZ_CPUY01000021.1 Protein Homology CDS 10244 11358 . + 0 ID=cds-AD853_RS16680;Parent=gene-AD853_RS16680;Note=frameshifted;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;gene=bcsZ;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011193286.1;locus_tag=AD853_RS16680;product=cellulose synthase complex periplasmic endoglucanase BcsZ;pseudo=true;transl_table=11 NZ_CPUY01000021.1 RefSeq gene 11674 13689 . + . ID=gene-AD853_RS16685;Name=hmsP;gbkey=Gene;gene=hmsP;gene_biotype=protein_coding;locus_tag=AD853_RS16685;old_locus_tag=ERS008462_03370 NZ_CPUY01000021.1 Protein Homology CDS 11674 13689 . + 0 ID=cds-WP_205390208.1;Parent=gene-AD853_RS16685;Dbxref=GenBank:WP_205390208.1;Name=WP_205390208.1;Ontology_term=GO:0007165;gbkey=CDS;gene=hmsP;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209560.1;locus_tag=AD853_RS16685;product=biofilm formation regulator HmsP;protein_id=WP_205390208.1;transl_table=11 NZ_CPUY01000021.1 RefSeq gene 14329 15033 . + . ID=gene-AD853_RS16690;Name=AD853_RS16690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS16690;old_locus_tag=ERS008462_03371 NZ_CPUY01000021.1 Protein Homology CDS 14329 15033 . + 0 ID=cds-WP_002209559.1;Parent=gene-AD853_RS16690;Dbxref=GenBank:WP_002209559.1;Name=WP_002209559.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004876906.1;locus_tag=AD853_RS16690;product=oligogalacturonate-specific porin KdgM family protein;protein_id=WP_002209559.1;transl_table=11 NZ_CPUY01000021.1 RefSeq gene 15279 16997 . + . ID=gene-AD853_RS16695;Name=AD853_RS16695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS16695;old_locus_tag=ERS008462_03372 NZ_CPUY01000021.1 Protein Homology CDS 15279 16997 . + 0 ID=cds-WP_002209555.1;Parent=gene-AD853_RS16695;Dbxref=GenBank:WP_002209555.1;Name=WP_002209555.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019084136.1;locus_tag=AD853_RS16695;product=pectate lyase;protein_id=WP_002209555.1;transl_table=11 NZ_CPUY01000021.1 RefSeq gene 17122 17601 . + . ID=gene-AD853_RS16700;Name=AD853_RS16700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS16700;old_locus_tag=ERS008462_03373 NZ_CPUY01000021.1 Protein Homology CDS 17122 17601 . + 0 ID=cds-WP_012105939.1;Parent=gene-AD853_RS16700;Dbxref=GenBank:WP_012105939.1;Name=WP_012105939.1;Ontology_term=GO:0030246;gbkey=CDS;go_function=carbohydrate binding|0030246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209554.1;locus_tag=AD853_RS16700;product=discoidin domain-containing protein;protein_id=WP_012105939.1;transl_table=11 NZ_CPUY01000021.1 RefSeq gene 18073 19362 . + . ID=gene-AD853_RS16705;Name=AD853_RS16705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS16705;old_locus_tag=ERS008462_03374 NZ_CPUY01000021.1 Protein Homology CDS 18073 19362 . + 0 ID=cds-WP_002209553.1;Parent=gene-AD853_RS16705;Dbxref=GenBank:WP_002209553.1;Name=WP_002209553.1;Ontology_term=GO:0006835,GO:0015293;gbkey=CDS;go_function=symporter activity|0015293||IEA;go_process=dicarboxylic acid transport|0006835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105938.1;locus_tag=AD853_RS16705;product=dicarboxylate/amino acid:cation symporter;protein_id=WP_002209553.1;transl_table=11 NZ_CPUY01000021.1 RefSeq gene 19727 21226 . + . ID=gene-AD853_RS16710;Name=AD853_RS16710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS16710;old_locus_tag=ERS008462_03376 NZ_CPUY01000021.1 Protein Homology CDS 19727 21226 . + 0 ID=cds-WP_002209550.1;Parent=gene-AD853_RS16710;Dbxref=GenBank:WP_002209550.1;Name=WP_002209550.1;Ontology_term=GO:0008237,GO:0046872;gbkey=CDS;go_function=metallopeptidase activity|0008237||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209550.1;locus_tag=AD853_RS16710;product=M16 family metallopeptidase;protein_id=WP_002209550.1;transl_table=11 NZ_CPUY01000021.1 RefSeq gene 21390 22334 . - . ID=gene-AD853_RS16715;Name=kdgK;gbkey=Gene;gene=kdgK;gene_biotype=protein_coding;locus_tag=AD853_RS16715;old_locus_tag=ERS008462_03377 NZ_CPUY01000021.1 Protein Homology CDS 21390 22334 . - 0 ID=cds-WP_002209549.1;Parent=gene-AD853_RS16715;Dbxref=GenBank:WP_002209549.1;Name=WP_002209549.1;Ontology_term=GO:0000166,GO:0005524,GO:0008673;gbkey=CDS;gene=kdgK;go_function=nucleotide binding|0000166||IEA,ATP binding|0005524||IEA,2-dehydro-3-deoxygluconokinase activity|0008673||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011193283.1;locus_tag=AD853_RS16715;product=2-dehydro-3-deoxygluconokinase;protein_id=WP_002209549.1;transl_table=11 NZ_CPUY01000021.1 RefSeq gene 22613 22813 . - . ID=gene-AD853_RS16720;Name=AD853_RS16720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS16720;old_locus_tag=ERS008462_03378 NZ_CPUY01000021.1 Protein Homology CDS 22613 22813 . - 0 ID=cds-WP_038823923.1;Parent=gene-AD853_RS16720;Dbxref=GenBank:WP_038823923.1;Name=WP_038823923.1;Ontology_term=GO:0016853;gbkey=CDS;go_function=isomerase activity|0016853||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105936.1;locus_tag=AD853_RS16720;product=2-hydroxymuconate tautomerase family protein;protein_id=WP_038823923.1;transl_table=11 NZ_CPUY01000021.1 RefSeq gene 23032 23877 . + . ID=gene-AD853_RS16725;Name=pdeH;gbkey=Gene;gene=pdeH;gene_biotype=protein_coding;locus_tag=AD853_RS16725;old_locus_tag=ERS008462_03379 NZ_CPUY01000021.1 Protein Homology CDS 23032 23877 . + 0 ID=cds-WP_012414119.1;Parent=gene-AD853_RS16725;Dbxref=GenBank:WP_012414119.1;Name=WP_012414119.1;gbkey=CDS;gene=pdeH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209547.1;locus_tag=AD853_RS16725;product=cyclic-guanylate-specific phosphodiesterase;protein_id=WP_012414119.1;transl_table=11 NZ_CPUY01000021.1 RefSeq gene 24182 26383 . + . ID=gene-AD853_RS16730;Name=AD853_RS16730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS16730;old_locus_tag=ERS008462_03380 NZ_CPUY01000021.1 Protein Homology CDS 24182 26383 . + 0 ID=cds-WP_038823921.1;Parent=gene-AD853_RS16730;Dbxref=GenBank:WP_038823921.1;Name=WP_038823921.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011906437.1;locus_tag=AD853_RS16730;product=AsmA family protein;protein_id=WP_038823921.1;transl_table=11 NZ_CPUY01000021.1 RefSeq gene 26388 27185 . - . ID=gene-AD853_RS16735;Name=AD853_RS16735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS16735;old_locus_tag=ERS008462_03381 NZ_CPUY01000021.1 Protein Homology CDS 26388 27185 . - 0 ID=cds-WP_012414117.1;Parent=gene-AD853_RS16735;Dbxref=GenBank:WP_012414117.1;Name=WP_012414117.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209546.1;locus_tag=AD853_RS16735;product=CDP-diacylglycerol diphosphatase;protein_id=WP_012414117.1;transl_table=11 NZ_CPUY01000021.1 RefSeq gene 27189 28271 . - . ID=gene-AD853_RS16740;Name=yhjD;gbkey=Gene;gene=yhjD;gene_biotype=protein_coding;locus_tag=AD853_RS16740;old_locus_tag=ERS008462_03382 NZ_CPUY01000021.1 Protein Homology CDS 27189 28271 . - 0 ID=cds-WP_038823918.1;Parent=gene-AD853_RS16740;Dbxref=GenBank:WP_038823918.1;Name=WP_038823918.1;gbkey=CDS;gene=yhjD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016674013.1;locus_tag=AD853_RS16740;product=inner membrane protein YhjD;protein_id=WP_038823918.1;transl_table=11 NZ_CPUY01000021.1 RefSeq gene 28951 32145 . + . ID=gene-AD853_RS16745;Name=AD853_RS16745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS16745;old_locus_tag=ERS008462_03383 NZ_CPUY01000021.1 Protein Homology CDS 28951 32145 . + 0 ID=cds-WP_038823917.1;Parent=gene-AD853_RS16745;Dbxref=GenBank:WP_038823917.1;Name=WP_038823917.1;Ontology_term=GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002214773.1;locus_tag=AD853_RS16745;product=autotransporter outer membrane beta-barrel domain-containing protein;protein_id=WP_038823917.1;transl_table=11 NZ_CPUY01000021.1 RefSeq gene 32233 33099 . + . ID=gene-AD853_RS16750;Name=AD853_RS16750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS16750;old_locus_tag=ERS008462_03384 NZ_CPUY01000021.1 Protein Homology CDS 32233 33099 . + 0 ID=cds-WP_071990102.1;Parent=gene-AD853_RS16750;Dbxref=GenBank:WP_071990102.1;Name=WP_071990102.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105930.1;locus_tag=AD853_RS16750;product=DUF3289 family protein;protein_id=WP_071990102.1;transl_table=11 NZ_CPUY01000021.1 RefSeq gene 33104 33604 . + . ID=gene-AD853_RS16755;Name=AD853_RS16755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS16755;old_locus_tag=ERS008462_03385 NZ_CPUY01000021.1 Protein Homology CDS 33104 33604 . + 0 ID=cds-WP_038825600.1;Parent=gene-AD853_RS16755;Dbxref=GenBank:WP_038825600.1;Name=WP_038825600.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209538.1;locus_tag=AD853_RS16755;product=DUF943 family protein;protein_id=WP_038825600.1;transl_table=11 NZ_CPUY01000021.1 RefSeq gene 33673 34179 . + . ID=gene-AD853_RS16760;Name=AD853_RS16760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS16760;old_locus_tag=ERS008462_03386 NZ_CPUY01000021.1 Protein Homology CDS 33673 34179 . + 0 ID=cds-WP_038400751.1;Parent=gene-AD853_RS16760;Dbxref=GenBank:WP_038400751.1;Name=WP_038400751.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209538.1;locus_tag=AD853_RS16760;product=DUF943 family protein;protein_id=WP_038400751.1;transl_table=11 NZ_CPUY01000021.1 RefSeq gene 34425 35561 . - . ID=gene-AD853_RS16765;Name=AD853_RS16765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS16765;old_locus_tag=ERS008462_03387 NZ_CPUY01000021.1 Protein Homology CDS 34425 35561 . - 0 ID=cds-WP_011193274.1;Parent=gene-AD853_RS16765;Dbxref=GenBank:WP_011193274.1;Name=WP_011193274.1;Ontology_term=GO:0005524,GO:0008887;gbkey=CDS;go_function=ATP binding|0005524||IEA,glycerate kinase activity|0008887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012414111.1;locus_tag=AD853_RS16765;product=glycerate kinase;protein_id=WP_011193274.1;transl_table=11 NZ_CPUY01000021.1 RefSeq gene 35572 36840 . - . ID=gene-AD853_RS16770;Name=AD853_RS16770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS16770;old_locus_tag=ERS008462_03388 NZ_CPUY01000021.1 Protein Homology CDS 35572 36840 . - 0 ID=cds-WP_012105926.1;Parent=gene-AD853_RS16770;Dbxref=GenBank:WP_012105926.1;Name=WP_012105926.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004090684.1;locus_tag=AD853_RS16770;product=GntP family permease;protein_id=WP_012105926.1;transl_table=11 NZ_CPUY01000021.1 RefSeq pseudogene 36843 37052 . + . ID=gene-AD853_RS22315;Name=AD853_RS22315;end_range=37052,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD853_RS22315;partial=true;pseudo=true NZ_CPUY01000021.1 Protein Homology CDS 36843 37052 . + 0 ID=cds-AD853_RS22315;Parent=gene-AD853_RS22315;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=37052,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002227114.1;locus_tag=AD853_RS22315;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CPUY01000021.1 RefSeq pseudogene 37018 38140 . - . ID=gene-AD853_RS16775;Name=AD853_RS16775;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD853_RS16775;old_locus_tag=ERS008462_03389;pseudo=true NZ_CPUY01000021.1 Protein Homology CDS 37018 38140 . - 0 ID=cds-AD853_RS16775;Parent=gene-AD853_RS16775;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011193272.1;locus_tag=AD853_RS16775;product=sugar diacid recognition domain-containing protein;pseudo=true;transl_table=11 NZ_CPUY01000021.1 RefSeq gene 38331 39683 . - . ID=gene-AD853_RS16780;Name=gorA;gbkey=Gene;gene=gorA;gene_biotype=protein_coding;locus_tag=AD853_RS16780;old_locus_tag=ERS008462_03390 NZ_CPUY01000021.1 Protein Homology CDS 38331 39683 . - 0 ID=cds-WP_012303362.1;Parent=gene-AD853_RS16780;Dbxref=GenBank:WP_012303362.1;Name=WP_012303362.1;Ontology_term=GO:0006749,GO:0045454,GO:0004362,GO:0050660,GO:0050661;gbkey=CDS;gene=gorA;go_function=glutathione-disulfide reductase (NADPH) activity|0004362||IEA,flavin adenine dinucleotide binding|0050660||IEA,NADP binding|0050661||IEA;go_process=glutathione metabolic process|0006749||IEA,cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003861215.1;locus_tag=AD853_RS16780;product=glutathione-disulfide reductase;protein_id=WP_012303362.1;transl_table=11 NZ_CPUY01000021.1 RefSeq gene 39851 40693 . - . ID=gene-AD853_RS16785;Name=AD853_RS16785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS16785;old_locus_tag=ERS008462_03391 NZ_CPUY01000021.1 Protein Homology CDS 39851 40693 . - 0 ID=cds-WP_011193270.1;Parent=gene-AD853_RS16785;Dbxref=GenBank:WP_011193270.1;Name=WP_011193270.1;Ontology_term=GO:0015976,GO:0070475,GO:0003723,GO:0008988,GO:1904047;gbkey=CDS;go_function=RNA binding|0003723||IEA,rRNA (adenine-N6-)-methyltransferase activity|0008988||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=carbon utilization|0015976||IEA,rRNA base methylation|0070475||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462497.1;locus_tag=AD853_RS16785;product=23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ;protein_id=WP_011193270.1;transl_table=11 NZ_CPUY01000021.1 RefSeq gene 41022 43064 . + . ID=gene-AD853_RS16790;Name=prlC;gbkey=Gene;gene=prlC;gene_biotype=protein_coding;locus_tag=AD853_RS16790;old_locus_tag=ERS008462_03392 NZ_CPUY01000021.1 Protein Homology CDS 41022 43064 . + 0 ID=cds-WP_038823913.1;Parent=gene-AD853_RS16790;Dbxref=GenBank:WP_038823913.1;Name=WP_038823913.1;Ontology_term=GO:0006508,GO:0004222;gbkey=CDS;gene=prlC;go_function=metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019084127.1;locus_tag=AD853_RS16790;product=oligopeptidase A;protein_id=WP_038823913.1;transl_table=11 NZ_CPUY01000021.1 RefSeq gene 43068 43838 . + . ID=gene-AD853_RS16795;Name=rsmJ;gbkey=Gene;gene=rsmJ;gene_biotype=protein_coding;locus_tag=AD853_RS16795;old_locus_tag=ERS008462_03393 NZ_CPUY01000021.1 Protein Homology CDS 43068 43838 . + 0 ID=cds-WP_002215483.1;Parent=gene-AD853_RS16795;Dbxref=GenBank:WP_002215483.1;Name=WP_002215483.1;Ontology_term=GO:0031167,GO:0008990;gbkey=CDS;gene=rsmJ;go_function=rRNA (guanine-N2-)-methyltransferase activity|0008990||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015683790.1;locus_tag=AD853_RS16795;product=16S rRNA (guanine(1516)-N(2))-methyltransferase RsmJ;protein_id=WP_002215483.1;transl_table=11 NZ_CPUY01000021.1 RefSeq gene 43903 45237 . - . ID=gene-AD853_RS16800;Name=AD853_RS16800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS16800;old_locus_tag=ERS008462_03394 NZ_CPUY01000021.1 Protein Homology CDS 43903 45237 . - 0 ID=cds-WP_038823924.1;Parent=gene-AD853_RS16800;Dbxref=GenBank:WP_038823924.1;Name=WP_038823924.1;Ontology_term=GO:0005509,GO:0005615;gbkey=CDS;go_component=extracellular space|0005615||IEA;go_function=calcium ion binding|0005509||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012414110.1;locus_tag=AD853_RS16800;product=M10 family metallopeptidase C-terminal domain-containing protein;protein_id=WP_038823924.1;transl_table=11 NZ_CPUY01000021.1 RefSeq gene 45484 46827 . - . ID=gene-AD853_RS16805;Name=gdhA;gbkey=Gene;gene=gdhA;gene_biotype=protein_coding;locus_tag=AD853_RS16805;old_locus_tag=ERS008462_03395 NZ_CPUY01000021.1 Protein Homology CDS 45484 46827 . - 0 ID=cds-WP_002209529.1;Parent=gene-AD853_RS16805;Dbxref=GenBank:WP_002209529.1;Name=WP_002209529.1;Ontology_term=GO:0006520,GO:0016639;gbkey=CDS;gene=gdhA;go_function=oxidoreductase activity%2C acting on the CH-NH2 group of donors%2C NAD or NADP as acceptor|0016639||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012230168.1;locus_tag=AD853_RS16805;product=NADP-specific glutamate dehydrogenase;protein_id=WP_002209529.1;transl_table=11 NZ_CPUY01000021.1 RefSeq gene 47074 47520 . - . ID=gene-AD853_RS16810;Name=uspA;gbkey=Gene;gene=uspA;gene_biotype=protein_coding;locus_tag=AD853_RS16810;old_locus_tag=ERS008462_03396 NZ_CPUY01000021.1 Protein Homology CDS 47074 47520 . - 0 ID=cds-WP_002209528.1;Parent=gene-AD853_RS16810;Dbxref=GenBank:WP_002209528.1;Name=WP_002209528.1;gbkey=CDS;gene=uspA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004707161.1;locus_tag=AD853_RS16810;product=universal stress protein UspA;protein_id=WP_002209528.1;transl_table=11 NZ_CPUY01000021.1 RefSeq gene 48211 48546 . + . ID=gene-AD853_RS16815;Name=uspB;gbkey=Gene;gene=uspB;gene_biotype=protein_coding;locus_tag=AD853_RS16815;old_locus_tag=ERS008462_03397 NZ_CPUY01000021.1 Protein Homology CDS 48211 48546 . + 0 ID=cds-WP_002209527.1;Parent=gene-AD853_RS16815;Dbxref=GenBank:WP_002209527.1;Name=WP_002209527.1;gbkey=CDS;gene=uspB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012442989.1;locus_tag=AD853_RS16815;product=universal stress protein UspB;protein_id=WP_002209527.1;transl_table=11 NZ_CPUY01000021.1 RefSeq gene 48693 50189 . - . ID=gene-AD853_RS16820;Name=pitA;gbkey=Gene;gene=pitA;gene_biotype=protein_coding;locus_tag=AD853_RS16820;old_locus_tag=ERS008462_03398 NZ_CPUY01000021.1 Protein Homology CDS 48693 50189 . - 0 ID=cds-WP_011193267.1;Parent=gene-AD853_RS16820;Dbxref=GenBank:WP_011193267.1;Name=WP_011193267.1;Ontology_term=GO:0006817,GO:0016020;gbkey=CDS;gene=pitA;go_component=membrane|0016020||IEA;go_process=phosphate ion transport|0006817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011193267.1;locus_tag=AD853_RS16820;product=inorganic phosphate transporter PitA;protein_id=WP_011193267.1;transl_table=11 NZ_CPUY01000021.1 RefSeq gene 50500 51696 . + . ID=gene-AD853_RS16825;Name=AD853_RS16825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS16825;old_locus_tag=ERS008462_03399 NZ_CPUY01000021.1 Protein Homology CDS 50500 51696 . + 0 ID=cds-WP_038824041.1;Parent=gene-AD853_RS16825;Dbxref=GenBank:WP_038824041.1;Name=WP_038824041.1;Ontology_term=GO:0016628,GO:0050660,GO:0050661;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors%2C NAD or NADP as acceptor|0016628||IEA,flavin adenine dinucleotide binding|0050660||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011193266.1;locus_tag=AD853_RS16825;product=BaiN/RdsA family NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_038824041.1;transl_table=11 NZ_CPUY01000021.1 RefSeq gene 51832 54375 . - . ID=gene-AD853_RS16830;Name=AD853_RS16830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS16830;old_locus_tag=ERS008462_03400 NZ_CPUY01000021.1 Protein Homology CDS 51832 54375 . - 0 ID=cds-WP_038824030.1;Parent=gene-AD853_RS16830;Dbxref=GenBank:WP_038824030.1;Name=WP_038824030.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012303369.1;locus_tag=AD853_RS16830;product=ATP-binding protein;protein_id=WP_038824030.1;transl_table=11 NZ_CPUY01000021.1 RefSeq pseudogene 54564 56089 . + . ID=gene-AD853_RS16835;Name=AD853_RS16835;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD853_RS16835;old_locus_tag=ERS008462_03401;pseudo=true NZ_CPUY01000021.1 Protein Homology CDS 54564 56089 . + 0 ID=cds-AD853_RS16835;Parent=gene-AD853_RS16835;Note=frameshifted;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012303370.1;locus_tag=AD853_RS16835;product=sugar ABC transporter ATP-binding protein;pseudo=true;transl_table=11 NZ_CPUY01000021.1 RefSeq gene 56082 57074 . + . ID=gene-AD853_RS16840;Name=AD853_RS16840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS16840;old_locus_tag=ERS008462_03403 NZ_CPUY01000021.1 Protein Homology CDS 56082 57074 . + 0 ID=cds-WP_002209522.1;Parent=gene-AD853_RS16840;Dbxref=GenBank:WP_002209522.1;Name=WP_002209522.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209522.1;locus_tag=AD853_RS16840;product=ABC transporter permease subunit;protein_id=WP_002209522.1;transl_table=11 NZ_CPUY01000021.1 RefSeq gene 57105 58049 . + . ID=gene-AD853_RS16845;Name=AD853_RS16845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS16845;old_locus_tag=ERS008462_03404 NZ_CPUY01000021.1 Protein Homology CDS 57105 58049 . + 0 ID=cds-WP_002209521.1;Parent=gene-AD853_RS16845;Dbxref=GenBank:WP_002209521.1;Name=WP_002209521.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313098.1;locus_tag=AD853_RS16845;product=ABC transporter substrate-binding protein;protein_id=WP_002209521.1;transl_table=11 NZ_CPUY01000021.1 RefSeq gene 58124 58807 . + . ID=gene-AD853_RS16850;Name=AD853_RS16850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS16850;old_locus_tag=ERS008462_03405 NZ_CPUY01000021.1 Protein Homology CDS 58124 58807 . + 0 ID=cds-WP_038824032.1;Parent=gene-AD853_RS16850;Dbxref=GenBank:WP_038824032.1;Name=WP_038824032.1;Ontology_term=GO:0043709,GO:0005525,GO:0046872,GO:0052621;gbkey=CDS;go_function=GTP binding|0005525||IEA,metal ion binding|0046872||IEA,diguanylate cyclase activity|0052621||IEA;go_process=cell adhesion involved in single-species biofilm formation|0043709||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209520.1;locus_tag=AD853_RS16850;product=D-lyxose/D-mannose isomerase;protein_id=WP_038824032.1;transl_table=11 NZ_CPUY01000021.1 RefSeq gene 58833 59693 . + . ID=gene-AD853_RS16855;Name=AD853_RS16855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS16855;old_locus_tag=ERS008462_03406 NZ_CPUY01000021.1 Protein Homology CDS 58833 59693 . + 0 ID=cds-WP_002209519.1;Parent=gene-AD853_RS16855;Dbxref=GenBank:WP_002209519.1;Name=WP_002209519.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209519.1;locus_tag=AD853_RS16855;product=ketose 1%2C6-bisphosphate aldolase;protein_id=WP_002209519.1;transl_table=11 NZ_CPUY01000021.1 RefSeq gene 59703 60710 . + . ID=gene-AD853_RS16860;Name=AD853_RS16860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS16860;old_locus_tag=ERS008462_03407 NZ_CPUY01000021.1 Protein Homology CDS 59703 60710 . + 0 ID=cds-WP_012105912.1;Parent=gene-AD853_RS16860;Dbxref=GenBank:WP_012105912.1;Name=WP_012105912.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105912.1;locus_tag=AD853_RS16860;product=adenosine kinase;protein_id=WP_012105912.1;transl_table=11 NZ_CPUY01000021.1 RefSeq gene 60785 61480 . - . ID=gene-AD853_RS16865;Name=AD853_RS16865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS16865;old_locus_tag=ERS008462_03408 NZ_CPUY01000021.1 Protein Homology CDS 60785 61480 . - 0 ID=cds-WP_038824034.1;Parent=gene-AD853_RS16865;Dbxref=GenBank:WP_038824034.1;Name=WP_038824034.1;Ontology_term=GO:0000160,GO:0006355,GO:0000156,GO:0003677;gbkey=CDS;go_function=phosphorelay response regulator activity|0000156||IEA,DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209516.1;locus_tag=AD853_RS16865;product=response regulator transcription factor;protein_id=WP_038824034.1;transl_table=11 NZ_CPUY01000021.1 RefSeq gene 61903 62115 . + . ID=gene-AD853_RS20965;Name=AD853_RS20965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS20965 NZ_CPUY01000021.1 Protein Homology CDS 61903 62115 . + 0 ID=cds-WP_002355529.1;Parent=gene-AD853_RS20965;Dbxref=GenBank:WP_002355529.1;Name=WP_002355529.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002355529.1;locus_tag=AD853_RS20965;product=hypothetical protein;protein_id=WP_002355529.1;transl_table=11 NZ_CPUY01000021.1 RefSeq gene 62244 62939 . + . ID=gene-AD853_RS16875;Name=AD853_RS16875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS16875;old_locus_tag=ERS008462_03410 NZ_CPUY01000021.1 Protein Homology CDS 62244 62939 . + 0 ID=cds-WP_002209515.1;Parent=gene-AD853_RS16875;Dbxref=GenBank:WP_002209515.1;Name=WP_002209515.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209515.1;locus_tag=AD853_RS16875;product=pirin family protein;protein_id=WP_002209515.1;transl_table=11 NZ_CPUY01000021.1 RefSeq gene 63068 64063 . + . ID=gene-AD853_RS16880;Name=gntR;gbkey=Gene;gene=gntR;gene_biotype=protein_coding;locus_tag=AD853_RS16880;old_locus_tag=ERS008462_03411 NZ_CPUY01000021.1 Protein Homology CDS 63068 64063 . + 0 ID=cds-WP_038824037.1;Parent=gene-AD853_RS16880;Dbxref=GenBank:WP_038824037.1;Name=WP_038824037.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;gene=gntR;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209514.1;locus_tag=AD853_RS16880;product=gluconate operon transcriptional repressor GntR;protein_id=WP_038824037.1;transl_table=11 NZ_CPUY01000021.1 RefSeq gene 64125 65441 . - . ID=gene-AD853_RS16885;Name=gntT;gbkey=Gene;gene=gntT;gene_biotype=protein_coding;locus_tag=AD853_RS16885;old_locus_tag=ERS008462_03412 NZ_CPUY01000021.1 Protein Homology CDS 64125 65441 . - 0 ID=cds-WP_011193259.1;Parent=gene-AD853_RS16885;Dbxref=GenBank:WP_011193259.1;Name=WP_011193259.1;gbkey=CDS;gene=gntT;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105910.1;locus_tag=AD853_RS16885;product=gluconate transporter;protein_id=WP_011193259.1;transl_table=11 NZ_CPUY01000021.1 RefSeq gene 65658 66161 . + . ID=gene-AD853_RS16890;Name=AD853_RS16890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS16890;old_locus_tag=ERS008462_03413 NZ_CPUY01000021.1 Protein Homology CDS 65658 66161 . + 0 ID=cds-WP_038824038.1;Parent=gene-AD853_RS16890;Dbxref=GenBank:WP_038824038.1;Name=WP_038824038.1;Ontology_term=GO:0046177,GO:0005524,GO:0046316;gbkey=CDS;go_function=ATP binding|0005524||IEA,gluconokinase activity|0046316||IEA;go_process=obsolete D-gluconate catabolic process|0046177||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209512.1;locus_tag=AD853_RS16890;product=gluconokinase;protein_id=WP_038824038.1;transl_table=11 NZ_CPUY01000021.1 RefSeq gene 66343 67593 . + . ID=gene-AD853_RS20970;Name=AD853_RS20970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS20970;old_locus_tag=ERS008462_03414 NZ_CPUY01000021.1 Protein Homology CDS 66343 67593 . + 0 ID=cds-WP_072080853.1;Parent=gene-AD853_RS20970;Dbxref=GenBank:WP_072080853.1;Name=WP_072080853.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011193258.1;locus_tag=AD853_RS20970;product=polymorphic toxin type 46 domain-containing protein;protein_id=WP_072080853.1;transl_table=11 NZ_CPUY01000021.1 RefSeq gene 67590 67979 . + . ID=gene-AD853_RS16900;Name=AD853_RS16900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS16900;old_locus_tag=ERS008462_03415 NZ_CPUY01000021.1 Protein Homology CDS 67590 67979 . + 0 ID=cds-WP_011193257.1;Parent=gene-AD853_RS16900;Dbxref=GenBank:WP_011193257.1;Name=WP_011193257.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209509.1;locus_tag=AD853_RS16900;product=immunity protein Tsi6 family protein;protein_id=WP_011193257.1;transl_table=11 NZ_CPUY01000021.1 RefSeq gene 68164 68757 . - . ID=gene-AD853_RS16905;Name=AD853_RS16905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS16905;old_locus_tag=ERS008462_03416 NZ_CPUY01000021.1 Protein Homology CDS 68164 68757 . - 0 ID=cds-WP_002209508.1;Parent=gene-AD853_RS16905;Dbxref=GenBank:WP_002209508.1;Name=WP_002209508.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209508.1;locus_tag=AD853_RS16905;product=YhgN family NAAT transporter;protein_id=WP_002209508.1;transl_table=11 NZ_CPUY01000021.1 RefSeq gene 69115 70218 . + . ID=gene-AD853_RS16910;Name=asd;gbkey=Gene;gene=asd;gene_biotype=protein_coding;locus_tag=AD853_RS16910;old_locus_tag=ERS008462_03417 NZ_CPUY01000021.1 Protein Homology CDS 69115 70218 . + 0 ID=cds-WP_002209507.1;Parent=gene-AD853_RS16910;Dbxref=GenBank:WP_002209507.1;Name=WP_002209507.1;Ontology_term=GO:0009086,GO:0009088,GO:0009089,GO:0009097,GO:0004073,GO:0050661;gbkey=CDS;gene=asd;go_function=aspartate-semialdehyde dehydrogenase activity|0004073||IEA,NADP binding|0050661||IEA;go_process=methionine biosynthetic process|0009086||IEA,threonine biosynthetic process|0009088||IEA,lysine biosynthetic process via diaminopimelate|0009089||IEA,isoleucine biosynthetic process|0009097||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009111079.1;locus_tag=AD853_RS16910;product=aspartate-semialdehyde dehydrogenase;protein_id=WP_002209507.1;transl_table=11 NZ_CPUY01000021.1 RefSeq gene 70579 70941 . + . ID=gene-AD853_RS21890;Name=AD853_RS21890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS21890 NZ_CPUY01000021.1 Protein Homology CDS 70579 70941 . + 0 ID=cds-WP_223847769.1;Parent=gene-AD853_RS21890;Dbxref=GenBank:WP_223847769.1;Name=WP_223847769.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF037816.6;locus_tag=AD853_RS21890;product=RNase A-like domain-containing protein;protein_id=WP_223847769.1;transl_table=11 NZ_CPUY01000021.1 RefSeq gene 70961 71260 . + . ID=gene-AD853_RS16920;Name=AD853_RS16920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS16920;old_locus_tag=ERS008462_03418 NZ_CPUY01000021.1 Protein Homology CDS 70961 71260 . + 0 ID=cds-WP_038824039.1;Parent=gene-AD853_RS16920;Dbxref=GenBank:WP_038824039.1;Name=WP_038824039.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209505.1;locus_tag=AD853_RS16920;product=contact-dependent growth inhibition system immunity protein;protein_id=WP_038824039.1;transl_table=11 NZ_CPUY01000021.1 RefSeq gene 71267 71554 . + . ID=gene-AD853_RS16925;Name=AD853_RS16925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS16925;old_locus_tag=ERS008462_03419 NZ_CPUY01000021.1 Protein Homology CDS 71267 71554 . + 0 ID=cds-WP_012303375.1;Parent=gene-AD853_RS16925;Dbxref=GenBank:WP_012303375.1;Name=WP_012303375.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209504.1;locus_tag=AD853_RS16925;product=contact-dependent growth inhibition system immunity protein;protein_id=WP_012303375.1;transl_table=11 NZ_CPUY01000021.1 RefSeq pseudogene 71708 71846 . + . ID=gene-AD853_RS21630;Name=AD853_RS21630;end_range=71846,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD853_RS21630;old_locus_tag=ERS008462_03420;partial=true;pseudo=true NZ_CPUY01000021.1 Protein Homology CDS 71708 71846 . + 0 ID=cds-AD853_RS21630;Parent=gene-AD853_RS21630;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=71846,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001690050.1;locus_tag=AD853_RS21630;partial=true;product=IS66-like element accessory protein TnpA;pseudo=true;transl_table=11 NZ_CPUY01000021.1 RefSeq gene 73287 76662 . + . ID=gene-AD853_RS16930;Name=ilp;end_range=76662,.;gbkey=Gene;gene=ilp;gene_biotype=protein_coding;locus_tag=AD853_RS16930;partial=true NZ_CPUY01000021.1 Protein Homology CDS 73287 76662 . + 0 ID=cds-WP_155406234.1;Parent=gene-AD853_RS16930;Dbxref=GenBank:WP_155406234.1;Name=WP_155406234.1;end_range=76662,.;gbkey=CDS;gene=ilp;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002228169.1;locus_tag=AD853_RS16930;partial=true;product=inverse autotransporter adhesin Ilp;protein_id=WP_155406234.1;transl_table=11 ##sequence-region NZ_CPUY01000022.1 1 59599 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=633 NZ_CPUY01000022.1 RefSeq region 1 59599 . + . ID=NZ_CPUY01000022.1:1..59599;Dbxref=taxon:633;collection-date=1900/2008;country=South Africa;gbkey=Src;genome=genomic;isolation-source=not known;mol_type=genomic DNA;nat-host=pig;serovar=O:3;strain=IP32544 NZ_CPUY01000022.1 RefSeq gene 69 428 . - . ID=gene-AD853_RS16935;Name=yciH;gbkey=Gene;gene=yciH;gene_biotype=protein_coding;locus_tag=AD853_RS16935;old_locus_tag=ERS008462_03422 NZ_CPUY01000022.1 Protein Homology CDS 69 428 . - 0 ID=cds-WP_038825726.1;Parent=gene-AD853_RS16935;Dbxref=GenBank:WP_038825726.1;Name=WP_038825726.1;gbkey=CDS;gene=yciH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014070492.1;locus_tag=AD853_RS16935;product=stress response translation initiation inhibitor YciH;protein_id=WP_038825726.1;transl_table=11 NZ_CPUY01000022.1 RefSeq gene 428 1165 . - . ID=gene-AD853_RS16940;Name=pyrF;gbkey=Gene;gene=pyrF;gene_biotype=protein_coding;locus_tag=AD853_RS16940;old_locus_tag=ERS008462_03423 NZ_CPUY01000022.1 Protein Homology CDS 428 1165 . - 0 ID=cds-WP_038825024.1;Parent=gene-AD853_RS16940;Dbxref=GenBank:WP_038825024.1;Name=WP_038825024.1;Ontology_term=GO:0006207,GO:0044205,GO:0004590;gbkey=CDS;gene=pyrF;go_function=orotidine-5'-phosphate decarboxylase activity|0004590||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA,'de novo' UMP biosynthetic process|0044205||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192450.1;locus_tag=AD853_RS16940;product=orotidine-5'-phosphate decarboxylase;protein_id=WP_038825024.1;transl_table=11 NZ_CPUY01000022.1 RefSeq gene 1634 1933 . + . ID=gene-AD853_RS16945;Name=AD853_RS16945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS16945;old_locus_tag=ERS008462_03424 NZ_CPUY01000022.1 Protein Homology CDS 1634 1933 . + 0 ID=cds-WP_002210614.1;Parent=gene-AD853_RS16945;Dbxref=GenBank:WP_002210614.1;Name=WP_002210614.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210614.1;locus_tag=AD853_RS16945;product=hypothetical protein;protein_id=WP_002210614.1;transl_table=11 NZ_CPUY01000022.1 RefSeq gene 2036 3205 . - . ID=gene-AD853_RS16950;Name=lapB;gbkey=Gene;gene=lapB;gene_biotype=protein_coding;locus_tag=AD853_RS16950;old_locus_tag=ERS008462_03425 NZ_CPUY01000022.1 Protein Homology CDS 2036 3205 . - 0 ID=cds-WP_011192449.1;Parent=gene-AD853_RS16950;Dbxref=GenBank:WP_011192449.1;Name=WP_011192449.1;Ontology_term=GO:0008653,GO:0005515;gbkey=CDS;gene=lapB;go_function=protein binding|0005515||IEA;go_process=lipopolysaccharide metabolic process|0008653||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210615.1;locus_tag=AD853_RS16950;product=lipopolysaccharide assembly protein LapB;protein_id=WP_011192449.1;transl_table=11 NZ_CPUY01000022.1 RefSeq gene 3212 3523 . - . ID=gene-AD853_RS16955;Name=AD853_RS16955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS16955;old_locus_tag=ERS008462_03426 NZ_CPUY01000022.1 Protein Homology CDS 3212 3523 . - 0 ID=cds-WP_038825023.1;Parent=gene-AD853_RS16955;Dbxref=GenBank:WP_038825023.1;Name=WP_038825023.1;Ontology_term=GO:0008653,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_process=lipopolysaccharide metabolic process|0008653||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210616.1;locus_tag=AD853_RS16955;product=LapA family protein;protein_id=WP_038825023.1;transl_table=11 NZ_CPUY01000022.1 RefSeq gene 3704 4465 . - . ID=gene-AD853_RS16960;Name=pgpB;gbkey=Gene;gene=pgpB;gene_biotype=protein_coding;locus_tag=AD853_RS16960;old_locus_tag=ERS008462_03427 NZ_CPUY01000022.1 Protein Homology CDS 3704 4465 . - 0 ID=cds-WP_038825022.1;Parent=gene-AD853_RS16960;Dbxref=GenBank:WP_038825022.1;Name=WP_038825022.1;Ontology_term=GO:0008654,GO:0004609;gbkey=CDS;gene=pgpB;go_function=phosphatidylserine decarboxylase activity|0004609||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210617.1;locus_tag=AD853_RS16960;product=phosphatidylglycerophosphatase B;protein_id=WP_038825022.1;transl_table=11 NZ_CPUY01000022.1 RefSeq gene 4971 5561 . + . ID=gene-AD853_RS16965;Name=ribA;gbkey=Gene;gene=ribA;gene_biotype=protein_coding;locus_tag=AD853_RS16965;old_locus_tag=ERS008462_03428 NZ_CPUY01000022.1 Protein Homology CDS 4971 5561 . + 0 ID=cds-WP_002227926.1;Parent=gene-AD853_RS16965;Dbxref=GenBank:WP_002227926.1;Name=WP_002227926.1;Ontology_term=GO:0003935;gbkey=CDS;gene=ribA;go_function=GTP cyclohydrolase II activity|0003935||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002227926.1;locus_tag=AD853_RS16965;product=GTP cyclohydrolase II;protein_id=WP_002227926.1;transl_table=11 NZ_CPUY01000022.1 RefSeq gene 5725 8397 . - . ID=gene-AD853_RS16970;Name=acnA;gbkey=Gene;gene=acnA;gene_biotype=protein_coding;locus_tag=AD853_RS16970;old_locus_tag=ERS008462_03429 NZ_CPUY01000022.1 Protein Homology CDS 5725 8397 . - 0 ID=cds-WP_011906201.1;Parent=gene-AD853_RS16970;Dbxref=GenBank:WP_011906201.1;Name=WP_011906201.1;Ontology_term=GO:0006099,GO:0003994;gbkey=CDS;gene=acnA;go_function=aconitate hydratase activity|0003994||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005169930.1;locus_tag=AD853_RS16970;product=aconitate hydratase AcnA;protein_id=WP_011906201.1;transl_table=11 NZ_CPUY01000022.1 RefSeq gene 8761 9618 . - . ID=gene-AD853_RS16975;Name=AD853_RS16975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS16975;old_locus_tag=ERS008462_03430 NZ_CPUY01000022.1 Protein Homology CDS 8761 9618 . - 0 ID=cds-WP_038825725.1;Parent=gene-AD853_RS16975;Dbxref=GenBank:WP_038825725.1;Name=WP_038825725.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192447.1;locus_tag=AD853_RS16975;product=hypothetical protein;protein_id=WP_038825725.1;transl_table=11 NZ_CPUY01000022.1 RefSeq gene 9954 10928 . - . ID=gene-AD853_RS16980;Name=cysB;gbkey=Gene;gene=cysB;gene_biotype=protein_coding;locus_tag=AD853_RS16980;old_locus_tag=ERS008462_03431 NZ_CPUY01000022.1 Protein Homology CDS 9954 10928 . - 0 ID=cds-WP_002210621.1;Parent=gene-AD853_RS16980;Dbxref=GenBank:WP_002210621.1;Name=WP_002210621.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=cysB;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012017585.1;locus_tag=AD853_RS16980;product=HTH-type transcriptional regulator CysB;protein_id=WP_002210621.1;transl_table=11 NZ_CPUY01000022.1 RefSeq gene 11325 13940 . - . ID=gene-AD853_RS16985;Name=topA;gbkey=Gene;gene=topA;gene_biotype=protein_coding;locus_tag=AD853_RS16985;old_locus_tag=ERS008462_03432 NZ_CPUY01000022.1 Protein Homology CDS 11325 13940 . - 0 ID=cds-WP_038823909.1;Parent=gene-AD853_RS16985;Dbxref=GenBank:WP_038823909.1;Name=WP_038823909.1;Ontology_term=GO:0006260,GO:0006265,GO:0003677,GO:0003917,GO:0005737;gbkey=CDS;gene=topA;go_component=cytoplasm|0005737||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase type I (single strand cut%2C ATP-independent) activity|0003917||IEA;go_process=DNA replication|0006260||IEA,DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005191581.1;locus_tag=AD853_RS16985;product=type I DNA topoisomerase;protein_id=WP_038823909.1;transl_table=11 NZ_CPUY01000022.1 RefSeq gene 13967 14266 . - . ID=gene-AD853_RS16990;Name=AD853_RS16990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS16990;old_locus_tag=ERS008462_03433 NZ_CPUY01000022.1 Protein Homology CDS 13967 14266 . - 0 ID=cds-WP_002228458.1;Parent=gene-AD853_RS16990;Dbxref=GenBank:WP_002228458.1;Name=WP_002228458.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002228458.1;locus_tag=AD853_RS16990;product=hypothetical protein;protein_id=WP_002228458.1;transl_table=11 NZ_CPUY01000022.1 RefSeq gene 14359 14610 . + . ID=gene-AD853_RS16995;Name=AD853_RS16995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS16995;old_locus_tag=ERS008462_03434 NZ_CPUY01000022.1 Protein Homology CDS 14359 14610 . + 0 ID=cds-WP_002210623.1;Parent=gene-AD853_RS16995;Dbxref=GenBank:WP_002210623.1;Name=WP_002210623.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105106.1;locus_tag=AD853_RS16995;product=YciN family protein;protein_id=WP_002210623.1;transl_table=11 NZ_CPUY01000022.1 RefSeq gene 14729 15775 . - . ID=gene-AD853_RS17000;Name=sohB;gbkey=Gene;gene=sohB;gene_biotype=protein_coding;locus_tag=AD853_RS17000;old_locus_tag=ERS008462_03435 NZ_CPUY01000022.1 Protein Homology CDS 14729 15775 . - 0 ID=cds-WP_002210624.1;Parent=gene-AD853_RS17000;Dbxref=GenBank:WP_002210624.1;Name=WP_002210624.1;Ontology_term=GO:0006508,GO:0008233;gbkey=CDS;gene=sohB;go_function=peptidase activity|0008233||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004699213.1;locus_tag=AD853_RS17000;product=protease SohB;protein_id=WP_002210624.1;transl_table=11 NZ_CPUY01000022.1 RefSeq gene 15947 16708 . + . ID=gene-AD853_RS17005;Name=AD853_RS17005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS17005;old_locus_tag=ERS008462_03436 NZ_CPUY01000022.1 Protein Homology CDS 15947 16708 . + 0 ID=cds-WP_002210625.1;Parent=gene-AD853_RS17005;Dbxref=GenBank:WP_002210625.1;Name=WP_002210625.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005164229.1;locus_tag=AD853_RS17005;product=YciK family oxidoreductase;protein_id=WP_002210625.1;transl_table=11 NZ_CPUY01000022.1 RefSeq gene 16725 17315 . + . ID=gene-AD853_RS17010;Name=cobO;gbkey=Gene;gene=cobO;gene_biotype=protein_coding;locus_tag=AD853_RS17010;old_locus_tag=ERS008462_03437 NZ_CPUY01000022.1 Protein Homology CDS 16725 17315 . + 0 ID=cds-WP_002210626.1;Parent=gene-AD853_RS17010;Dbxref=GenBank:WP_002210626.1;Name=WP_002210626.1;Ontology_term=GO:0009236,GO:0008817;gbkey=CDS;gene=cobO;go_function=corrinoid adenosyltransferase activity|0008817||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019079496.1;locus_tag=AD853_RS17010;product=cob(I)yrinic acid a%2Cc-diamide adenosyltransferase;protein_id=WP_002210626.1;transl_table=11 NZ_CPUY01000022.1 RefSeq gene 17438 18472 . - . ID=gene-AD853_RS17015;Name=rluB;gbkey=Gene;gene=rluB;gene_biotype=protein_coding;locus_tag=AD853_RS17015;old_locus_tag=ERS008462_03438 NZ_CPUY01000022.1 Protein Homology CDS 17438 18472 . - 0 ID=cds-WP_011192445.1;Parent=gene-AD853_RS17015;Dbxref=GenBank:WP_011192445.1;Name=WP_011192445.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;gene=rluB;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210627.1;locus_tag=AD853_RS17015;product=23S rRNA pseudouridine(2605) synthase RluB;protein_id=WP_011192445.1;transl_table=11 NZ_CPUY01000022.1 RefSeq gene 18802 19422 . - . ID=gene-AD853_RS17020;Name=AD853_RS17020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS17020;old_locus_tag=ERS008462_03439 NZ_CPUY01000022.1 Protein Homology CDS 18802 19422 . - 0 ID=cds-WP_002210628.1;Parent=gene-AD853_RS17020;Dbxref=GenBank:WP_002210628.1;Name=WP_002210628.1;Ontology_term=GO:0006400,GO:0003725,GO:0061710;gbkey=CDS;go_function=double-stranded RNA binding|0003725||IEA,L-threonylcarbamoyladenylate synthase|0061710||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004390873.1;locus_tag=AD853_RS17020;product=L-threonylcarbamoyladenylate synthase;protein_id=WP_002210628.1;transl_table=11 NZ_CPUY01000022.1 RefSeq gene 19439 20374 . - . ID=gene-AD853_RS17025;Name=rnm;gbkey=Gene;gene=rnm;gene_biotype=protein_coding;gene_synonym=trpH,yciV;locus_tag=AD853_RS17025;old_locus_tag=ERS008462_03440 NZ_CPUY01000022.1 Protein Homology CDS 19439 20374 . - 0 ID=cds-WP_012304085.1;Parent=gene-AD853_RS17025;Dbxref=GenBank:WP_012304085.1;Name=WP_012304085.1;Ontology_term=GO:0006364,GO:0004534,GO:0035312,GO:0097657;gbkey=CDS;gene=rnm;go_function=5'-3' RNA exonuclease activity|0004534||IEA,5'-3' DNA exonuclease activity|0035312||IEA,3'%2C5'-nucleotide bisphosphate phosphatase activity|0097657||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210629.1;locus_tag=AD853_RS17025;product=RNase RNM;protein_id=WP_012304085.1;transl_table=11 NZ_CPUY01000022.1 cmsearch sequence_feature 20636 20737 . + . ID=id-NZ_CPUY01000022.1:20636..20737;Dbxref=RFAM:RF00513;Note=Trp leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.5 NZ_CPUY01000022.1 RefSeq gene 20793 22355 . + . ID=gene-AD853_RS17040;Name=AD853_RS17040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS17040;old_locus_tag=ERS008462_03442 NZ_CPUY01000022.1 Protein Homology CDS 20793 22355 . + 0 ID=cds-WP_038823912.1;Parent=gene-AD853_RS17040;Dbxref=GenBank:WP_038823912.1;Name=WP_038823912.1;Ontology_term=GO:0009058,GO:0004049;gbkey=CDS;go_function=anthranilate synthase activity|0004049||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002228454.1;locus_tag=AD853_RS17040;product=anthranilate synthase component 1;protein_id=WP_038823912.1;transl_table=11 NZ_CPUY01000022.1 RefSeq pseudogene 22355 23946 . + . ID=gene-AD853_RS22320;Name=trpD;gbkey=Gene;gene=trpD;gene_biotype=pseudogene;locus_tag=AD853_RS22320;pseudo=true NZ_CPUY01000022.1 Protein Homology CDS 22355 23946 . + 0 ID=cds-AD853_RS22320;Parent=gene-AD853_RS22320;Note=frameshifted;Ontology_term=GO:0000162,GO:0004048;gbkey=CDS;gene=trpD;go_function=anthranilate phosphoribosyltransferase activity|0004048||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415779.1;locus_tag=AD853_RS22320;product=bifunctional anthranilate synthase glutamate amidotransferase component TrpG/anthranilate phosphoribosyltransferase TrpD;pseudo=true;transl_table=11 NZ_CPUY01000022.1 RefSeq gene 23950 25377 . + . ID=gene-AD853_RS17055;Name=trpCF;gbkey=Gene;gene=trpCF;gene_biotype=protein_coding;locus_tag=AD853_RS17055;old_locus_tag=ERS008462_03445 NZ_CPUY01000022.1 Protein Homology CDS 23950 25377 . + 0 ID=cds-WP_011192443.1;Parent=gene-AD853_RS17055;Dbxref=GenBank:WP_011192443.1;Name=WP_011192443.1;Ontology_term=GO:0006568,GO:0004425,GO:0004640;gbkey=CDS;gene=trpCF;go_function=indole-3-glycerol-phosphate synthase activity|0004425||IEA,phosphoribosylanthranilate isomerase activity|0004640||IEA;go_process=L-tryptophan metabolic process|0006568||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210632.1;locus_tag=AD853_RS17055;product=bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF;protein_id=WP_011192443.1;transl_table=11 NZ_CPUY01000022.1 RefSeq gene 25512 26702 . + . ID=gene-AD853_RS17060;Name=trpB;gbkey=Gene;gene=trpB;gene_biotype=protein_coding;locus_tag=AD853_RS17060;old_locus_tag=ERS008462_03446 NZ_CPUY01000022.1 Protein Homology CDS 25512 26702 . + 0 ID=cds-WP_002210633.1;Parent=gene-AD853_RS17060;Dbxref=GenBank:WP_002210633.1;Name=WP_002210633.1;Ontology_term=GO:0000162,GO:0004834;gbkey=CDS;gene=trpB;go_function=tryptophan synthase activity|0004834||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019083174.1;locus_tag=AD853_RS17060;product=tryptophan synthase subunit beta;protein_id=WP_002210633.1;transl_table=11 NZ_CPUY01000022.1 RefSeq gene 26702 27508 . + . ID=gene-AD853_RS17065;Name=trpA;gbkey=Gene;gene=trpA;gene_biotype=protein_coding;locus_tag=AD853_RS17065;old_locus_tag=ERS008462_03447 NZ_CPUY01000022.1 Protein Homology CDS 26702 27508 . + 0 ID=cds-WP_038823906.1;Parent=gene-AD853_RS17065;Dbxref=GenBank:WP_038823906.1;Name=WP_038823906.1;Ontology_term=GO:0000162,GO:0004834;gbkey=CDS;gene=trpA;go_function=tryptophan synthase activity|0004834||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019079505.1;locus_tag=AD853_RS17065;product=tryptophan synthase subunit alpha;protein_id=WP_038823906.1;transl_table=11 NZ_CPUY01000022.1 RefSeq gene 27851 28165 . + . ID=gene-AD853_RS17070;Name=AD853_RS17070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS17070;old_locus_tag=ERS008462_03448 NZ_CPUY01000022.1 Protein Homology CDS 27851 28165 . + 0 ID=cds-WP_002210636.1;Parent=gene-AD853_RS17070;Dbxref=GenBank:WP_002210636.1;Name=WP_002210636.1;Ontology_term=GO:0008289;gbkey=CDS;go_function=lipid binding|0008289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210636.1;locus_tag=AD853_RS17070;product=BON domain-containing protein;protein_id=WP_002210636.1;transl_table=11 NZ_CPUY01000022.1 RefSeq gene 28312 28947 . - . ID=gene-AD853_RS17075;Name=ompW;gbkey=Gene;gene=ompW;gene_biotype=protein_coding;locus_tag=AD853_RS17075;old_locus_tag=ERS008462_03449 NZ_CPUY01000022.1 Protein Homology CDS 28312 28947 . - 0 ID=cds-WP_011192441.1;Parent=gene-AD853_RS17075;Dbxref=GenBank:WP_011192441.1;Name=WP_011192441.1;Ontology_term=GO:0019867;gbkey=CDS;gene=ompW;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192441.1;locus_tag=AD853_RS17075;product=outer membrane protein OmpW;protein_id=WP_011192441.1;transl_table=11 NZ_CPUY01000022.1 RefSeq gene 29056 29271 . - . ID=gene-AD853_RS17080;Name=AD853_RS17080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS17080 NZ_CPUY01000022.1 Protein Homology CDS 29056 29271 . - 0 ID=cds-WP_002210638.1;Parent=gene-AD853_RS17080;Dbxref=GenBank:WP_002210638.1;Name=WP_002210638.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210638.1;locus_tag=AD853_RS17080;product=hypothetical protein;protein_id=WP_002210638.1;transl_table=11 NZ_CPUY01000022.1 RefSeq gene 29433 30203 . + . ID=gene-AD853_RS17085;Name=AD853_RS17085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS17085;old_locus_tag=ERS008462_03450 NZ_CPUY01000022.1 Protein Homology CDS 29433 30203 . + 0 ID=cds-WP_002210639.1;Parent=gene-AD853_RS17085;Dbxref=GenBank:WP_002210639.1;Name=WP_002210639.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210639.1;locus_tag=AD853_RS17085;product=YciC family protein;protein_id=WP_002210639.1;transl_table=11 NZ_CPUY01000022.1 RefSeq gene 30324 32063 . - . ID=gene-AD853_RS17090;Name=AD853_RS17090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS17090;old_locus_tag=ERS008462_03451 NZ_CPUY01000022.1 Protein Homology CDS 30324 32063 . - 0 ID=cds-WP_038825723.1;Parent=gene-AD853_RS17090;Dbxref=GenBank:WP_038825723.1;Name=WP_038825723.1;Ontology_term=GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012413722.1;locus_tag=AD853_RS17090;product=SulP family inorganic anion transporter;protein_id=WP_038825723.1;transl_table=11 NZ_CPUY01000022.1 RefSeq gene 32294 32836 . + . ID=gene-AD853_RS17095;Name=AD853_RS17095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS17095;old_locus_tag=ERS008462_03452 NZ_CPUY01000022.1 Protein Homology CDS 32294 32836 . + 0 ID=cds-WP_002210640.1;Parent=gene-AD853_RS17095;Dbxref=GenBank:WP_002210640.1;Name=WP_002210640.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210640.1;locus_tag=AD853_RS17095;product=septation protein A;protein_id=WP_002210640.1;transl_table=11 NZ_CPUY01000022.1 RefSeq gene 32916 33365 . + . ID=gene-AD853_RS17100;Name=yciA;gbkey=Gene;gene=yciA;gene_biotype=protein_coding;locus_tag=AD853_RS17100;old_locus_tag=ERS008462_03453 NZ_CPUY01000022.1 Protein Homology CDS 32916 33365 . + 0 ID=cds-WP_002210641.1;Parent=gene-AD853_RS17100;Dbxref=GenBank:WP_002210641.1;Name=WP_002210641.1;Ontology_term=GO:0016790;gbkey=CDS;gene=yciA;go_function=thiolester hydrolase activity|0016790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004875179.1;locus_tag=AD853_RS17100;product=acyl-CoA thioester hydrolase YciA;protein_id=WP_002210641.1;transl_table=11 NZ_CPUY01000022.1 RefSeq gene 33434 34192 . - . ID=gene-AD853_RS17105;Name=tonB;gbkey=Gene;gene=tonB;gene_biotype=protein_coding;locus_tag=AD853_RS17105;old_locus_tag=ERS008462_03454 NZ_CPUY01000022.1 Protein Homology CDS 33434 34192 . - 0 ID=cds-WP_038825722.1;Parent=gene-AD853_RS17105;Dbxref=GenBank:WP_038825722.1;Name=WP_038825722.1;gbkey=CDS;gene=tonB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210642.1;locus_tag=AD853_RS17105;product=TonB system transport protein TonB;protein_id=WP_038825722.1;transl_table=11 NZ_CPUY01000022.1 RefSeq gene 34493 34789 . + . ID=gene-AD853_RS17110;Name=AD853_RS17110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS17110;old_locus_tag=ERS008462_03456 NZ_CPUY01000022.1 Protein Homology CDS 34493 34789 . + 0 ID=cds-WP_002210643.1;Parent=gene-AD853_RS17110;Dbxref=GenBank:WP_002210643.1;Name=WP_002210643.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210643.1;locus_tag=AD853_RS17110;product=YciI family protein;protein_id=WP_002210643.1;transl_table=11 NZ_CPUY01000022.1 RefSeq gene 35027 35272 . + . ID=gene-AD853_RS20980;Name=AD853_RS20980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS20980;old_locus_tag=ERS008462_03457 NZ_CPUY01000022.1 Protein Homology CDS 35027 35272 . + 0 ID=cds-WP_002217646.1;Parent=gene-AD853_RS20980;Dbxref=GenBank:WP_002217646.1;Name=WP_002217646.1;Ontology_term=GO:0008270;gbkey=CDS;go_function=zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002217646.1;locus_tag=AD853_RS20980;product=TFIIB-type zinc ribbon-containing protein;protein_id=WP_002217646.1;transl_table=11 NZ_CPUY01000022.1 RefSeq gene 35389 35652 . - . ID=gene-AD853_RS17115;Name=AD853_RS17115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS17115;old_locus_tag=ERS008462_03458 NZ_CPUY01000022.1 Protein Homology CDS 35389 35652 . - 0 ID=cds-WP_002210644.1;Parent=gene-AD853_RS17115;Dbxref=GenBank:WP_002210644.1;Name=WP_002210644.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210644.1;locus_tag=AD853_RS17115;product=hypothetical protein;protein_id=WP_002210644.1;transl_table=11 NZ_CPUY01000022.1 RefSeq gene 35873 36412 . - . ID=gene-AD853_RS17120;Name=AD853_RS17120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS17120;old_locus_tag=ERS008462_03459 NZ_CPUY01000022.1 Protein Homology CDS 35873 36412 . - 0 ID=cds-WP_002210646.1;Parent=gene-AD853_RS17120;Dbxref=GenBank:WP_002210646.1;Name=WP_002210646.1;Ontology_term=GO:0044384;gbkey=CDS;go_component=host outer membrane|0044384||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210646.1;locus_tag=AD853_RS17120;product=Ail/Lom family outer membrane beta-barrel protein;protein_id=WP_002210646.1;transl_table=11 NZ_CPUY01000022.1 RefSeq gene 36862 37038 . - . ID=gene-AD853_RS20985;Name=AD853_RS20985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS20985 NZ_CPUY01000022.1 Protein Homology CDS 36862 37038 . - 0 ID=cds-WP_002388651.1;Parent=gene-AD853_RS20985;Dbxref=GenBank:WP_002388651.1;Name=WP_002388651.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012769897.1;locus_tag=AD853_RS20985;product=YciY family protein;protein_id=WP_002388651.1;transl_table=11 NZ_CPUY01000022.1 RefSeq gene 37270 37380 . + . ID=gene-AD853_RS21895;Name=AD853_RS21895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS21895 NZ_CPUY01000022.1 Protein Homology CDS 37270 37380 . + 0 ID=cds-WP_190947803.1;Parent=gene-AD853_RS21895;Dbxref=GenBank:WP_190947803.1;Name=WP_190947803.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002264692.1;locus_tag=AD853_RS21895;product=gluconate 5-dehydrogenase;protein_id=WP_190947803.1;transl_table=11 NZ_CPUY01000022.1 RefSeq gene 37480 38940 . + . ID=gene-AD853_RS17125;Name=cls;gbkey=Gene;gene=cls;gene_biotype=protein_coding;locus_tag=AD853_RS17125;old_locus_tag=ERS008462_03460 NZ_CPUY01000022.1 Protein Homology CDS 37480 38940 . + 0 ID=cds-WP_011192437.1;Parent=gene-AD853_RS17125;Dbxref=GenBank:WP_011192437.1;Name=WP_011192437.1;Ontology_term=GO:0032049,GO:0008808,GO:0016780;gbkey=CDS;gene=cls;go_function=cardiolipin synthase activity|0008808||IEA,phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA;go_process=cardiolipin biosynthetic process|0032049||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126413.1;locus_tag=AD853_RS17125;product=cardiolipin synthase;protein_id=WP_011192437.1;transl_table=11 NZ_CPUY01000022.1 RefSeq gene 39105 39428 . + . ID=gene-AD853_RS17130;Name=AD853_RS17130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS17130;old_locus_tag=ERS008462_03461 NZ_CPUY01000022.1 Protein Homology CDS 39105 39428 . + 0 ID=cds-WP_002210649.1;Parent=gene-AD853_RS17130;Dbxref=GenBank:WP_002210649.1;Name=WP_002210649.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210649.1;locus_tag=AD853_RS17130;product=HI1450 family dsDNA-mimic protein;protein_id=WP_002210649.1;transl_table=11 NZ_CPUY01000022.1 RefSeq gene 39727 39942 . - . ID=gene-AD853_RS17135;Name=AD853_RS17135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS17135;old_locus_tag=ERS008462_03462 NZ_CPUY01000022.1 Protein Homology CDS 39727 39942 . - 0 ID=cds-WP_002210650.1;Parent=gene-AD853_RS17135;Dbxref=GenBank:WP_002210650.1;Name=WP_002210650.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210650.1;locus_tag=AD853_RS17135;product=hypothetical protein;protein_id=WP_002210650.1;transl_table=11 NZ_CPUY01000022.1 RefSeq gene 40513 41514 . - . ID=gene-AD853_RS17140;Name=oppF;gbkey=Gene;gene=oppF;gene_biotype=protein_coding;locus_tag=AD853_RS17140;old_locus_tag=ERS008462_03463 NZ_CPUY01000022.1 Protein Homology CDS 40513 41514 . - 0 ID=cds-WP_002210651.1;Parent=gene-AD853_RS17140;Dbxref=GenBank:WP_002210651.1;Name=WP_002210651.1;Ontology_term=GO:0015833,GO:0005524;gbkey=CDS;gene=oppF;go_function=ATP binding|0005524||IEA;go_process=peptide transport|0015833||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227487.1;locus_tag=AD853_RS17140;product=murein tripeptide/oligopeptide ABC transporter ATP binding protein OppF;protein_id=WP_002210651.1;transl_table=11 NZ_CPUY01000022.1 RefSeq gene 41511 42512 . - . ID=gene-AD853_RS17145;Name=oppD;gbkey=Gene;gene=oppD;gene_biotype=protein_coding;locus_tag=AD853_RS17145;old_locus_tag=ERS008462_03464 NZ_CPUY01000022.1 Protein Homology CDS 41511 42512 . - 0 ID=cds-WP_002210652.1;Parent=gene-AD853_RS17145;Dbxref=GenBank:WP_002210652.1;Name=WP_002210652.1;gbkey=CDS;gene=oppD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105111.1;locus_tag=AD853_RS17145;product=ABC transporter ATP-binding protein;protein_id=WP_002210652.1;transl_table=11 NZ_CPUY01000022.1 RefSeq gene 42524 43432 . - . ID=gene-AD853_RS17150;Name=oppC;gbkey=Gene;gene=oppC;gene_biotype=protein_coding;locus_tag=AD853_RS17150;old_locus_tag=ERS008462_03465 NZ_CPUY01000022.1 Protein Homology CDS 42524 43432 . - 0 ID=cds-WP_025470761.1;Parent=gene-AD853_RS17150;Dbxref=GenBank:WP_025470761.1;Name=WP_025470761.1;Ontology_term=GO:0055085;gbkey=CDS;gene=oppC;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000979653.1;locus_tag=AD853_RS17150;product=oligopeptide ABC transporter permease OppC;protein_id=WP_025470761.1;transl_table=11 NZ_CPUY01000022.1 RefSeq gene 43448 44368 . - . ID=gene-AD853_RS17155;Name=oppB;gbkey=Gene;gene=oppB;gene_biotype=protein_coding;locus_tag=AD853_RS17155;old_locus_tag=ERS008462_03466 NZ_CPUY01000022.1 Protein Homology CDS 43448 44368 . - 0 ID=cds-WP_002210654.1;Parent=gene-AD853_RS17155;Dbxref=GenBank:WP_002210654.1;Name=WP_002210654.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=oppB;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126405.1;locus_tag=AD853_RS17155;product=oligopeptide ABC transporter permease OppB;protein_id=WP_002210654.1;transl_table=11 NZ_CPUY01000022.1 RefSeq gene 44455 46092 . - . ID=gene-AD853_RS17160;Name=oppA;gbkey=Gene;gene=oppA;gene_biotype=protein_coding;locus_tag=AD853_RS17160;old_locus_tag=ERS008462_03467 NZ_CPUY01000022.1 Protein Homology CDS 44455 46092 . - 0 ID=cds-WP_002218177.1;Parent=gene-AD853_RS17160;Dbxref=GenBank:WP_002218177.1;Name=WP_002218177.1;Ontology_term=GO:0055085,GO:0043190;gbkey=CDS;gene=oppA;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002218177.1;locus_tag=AD853_RS17160;product=oligopeptide ABC transporter substrate-binding protein OppA;protein_id=WP_002218177.1;transl_table=11 NZ_CPUY01000022.1 RefSeq gene 46930 47574 . - . ID=gene-AD853_RS17165;Name=AD853_RS17165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS17165;old_locus_tag=ERS008462_03468 NZ_CPUY01000022.1 Protein Homology CDS 46930 47574 . - 0 ID=cds-WP_011192436.1;Parent=gene-AD853_RS17165;Dbxref=GenBank:WP_011192436.1;Name=WP_011192436.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013575947.1;locus_tag=AD853_RS17165;product=YchE family NAAT transporter;protein_id=WP_011192436.1;transl_table=11 NZ_CPUY01000022.1 RefSeq gene 48402 51077 . + . ID=gene-AD853_RS17170;Name=adhE;gbkey=Gene;gene=adhE;gene_biotype=protein_coding;gene_synonym=adhC;locus_tag=AD853_RS17170;old_locus_tag=ERS008462_03469 NZ_CPUY01000022.1 Protein Homology CDS 48402 51077 . + 0 ID=cds-WP_002210657.1;Parent=gene-AD853_RS17170;Dbxref=GenBank:WP_002210657.1;Name=WP_002210657.1;Ontology_term=GO:0006066,GO:0015976,GO:0004022,GO:0016620,GO:0046872;gbkey=CDS;gene=adhE;go_function=alcohol dehydrogenase (NAD+) activity|0004022||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA,metal ion binding|0046872||IEA;go_process=alcohol metabolic process|0006066||IEA,carbon utilization|0015976||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002416549.1;locus_tag=AD853_RS17170;product=bifunctional acetaldehyde-CoA/alcohol dehydrogenase;protein_id=WP_002210657.1;transl_table=11 NZ_CPUY01000022.1 RefSeq gene 51827 52417 . - . ID=gene-AD853_RS17175;Name=AD853_RS17175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS17175;old_locus_tag=ERS008462_03470 NZ_CPUY01000022.1 Protein Homology CDS 51827 52417 . - 0 ID=cds-WP_002210659.1;Parent=gene-AD853_RS17175;Dbxref=GenBank:WP_002210659.1;Name=WP_002210659.1;Ontology_term=GO:0004797,GO:0005524;gbkey=CDS;go_function=thymidine kinase activity|0004797||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210659.1;locus_tag=AD853_RS17175;product=thymidine kinase;protein_id=WP_002210659.1;transl_table=11 NZ_CPUY01000022.1 RefSeq gene 53167 53574 . + . ID=gene-AD853_RS17180;Name=hns;gbkey=Gene;gene=hns;gene_biotype=protein_coding;locus_tag=AD853_RS17180;old_locus_tag=ERS008462_03471 NZ_CPUY01000022.1 Protein Homology CDS 53167 53574 . + 0 ID=cds-WP_002223593.1;Parent=gene-AD853_RS17180;Dbxref=GenBank:WP_002223593.1;Name=WP_002223593.1;Ontology_term=GO:0071824,GO:0003677;gbkey=CDS;gene=hns;go_function=DNA binding|0003677||IEA;go_process=protein-DNA complex organization|0071824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227498.1;locus_tag=AD853_RS17180;product=histone-like nucleoid-structuring protein H-NS;protein_id=WP_002223593.1;transl_table=11 NZ_CPUY01000022.1 RefSeq gene 54009 55355 . - . ID=gene-AD853_RS17185;Name=AD853_RS17185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS17185;old_locus_tag=ERS008462_03472 NZ_CPUY01000022.1 Protein Homology CDS 54009 55355 . - 0 ID=cds-WP_002210664.1;Parent=gene-AD853_RS17185;Dbxref=GenBank:WP_002210664.1;Name=WP_002210664.1;Ontology_term=GO:0016616;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210664.1;locus_tag=AD853_RS17185;product=UDP-glucose dehydrogenase family protein;protein_id=WP_002210664.1;transl_table=11 NZ_CPUY01000022.1 RefSeq pseudogene 55662 56679 . - . ID=gene-AD853_RS17190;Name=rssB;gbkey=Gene;gene=rssB;gene_biotype=pseudogene;locus_tag=AD853_RS17190;old_locus_tag=ERS008462_03473;pseudo=true NZ_CPUY01000022.1 Protein Homology CDS 55662 56679 . - 0 ID=cds-AD853_RS17190;Parent=gene-AD853_RS17190;Note=frameshifted;Ontology_term=GO:0000160;gbkey=CDS;gene=rssB;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002230892.1;locus_tag=AD853_RS17190;product=two-component system response regulator RssB;pseudo=true;transl_table=11 NZ_CPUY01000022.1 RefSeq gene 58014 58478 . + . ID=gene-AD853_RS17195;Name=AD853_RS17195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS17195;old_locus_tag=ERS008462_03475 NZ_CPUY01000022.1 Protein Homology CDS 58014 58478 . + 0 ID=cds-WP_038825285.1;Parent=gene-AD853_RS17195;Dbxref=GenBank:WP_038825285.1;Name=WP_038825285.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210666.1;locus_tag=AD853_RS17195;product=YchJ family protein;protein_id=WP_038825285.1;transl_table=11 NZ_CPUY01000022.1 RefSeq gene 58562 59410 . + . ID=gene-AD853_RS17200;Name=purU;gbkey=Gene;gene=purU;gene_biotype=protein_coding;locus_tag=AD853_RS17200;old_locus_tag=ERS008462_03476 NZ_CPUY01000022.1 Protein Homology CDS 58562 59410 . + 0 ID=cds-WP_002230891.1;Parent=gene-AD853_RS17200;Dbxref=GenBank:WP_002230891.1;Name=WP_002230891.1;Ontology_term=GO:0006189,GO:0008864;gbkey=CDS;gene=purU;go_function=formyltetrahydrofolate deformylase activity|0008864||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002230891.1;locus_tag=AD853_RS17200;product=formyltetrahydrofolate deformylase;protein_id=WP_002230891.1;transl_table=11 ##sequence-region NZ_CPUY01000023.1 1 53520 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=633 NZ_CPUY01000023.1 RefSeq region 1 53520 . + . ID=NZ_CPUY01000023.1:1..53520;Dbxref=taxon:633;collection-date=1900/2008;country=South Africa;gbkey=Src;genome=genomic;isolation-source=not known;mol_type=genomic DNA;nat-host=pig;serovar=O:3;strain=IP32544 NZ_CPUY01000023.1 RefSeq gene 175 864 . + . ID=gene-AD853_RS17205;Name=AD853_RS17205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS17205;old_locus_tag=ERS008462_03477 NZ_CPUY01000023.1 Protein Homology CDS 175 864 . + 0 ID=cds-WP_002215905.1;Parent=gene-AD853_RS17205;Dbxref=GenBank:WP_002215905.1;Name=WP_002215905.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002215905.1;locus_tag=AD853_RS17205;product=FadR/GntR family transcriptional regulator;protein_id=WP_002215905.1;transl_table=11 NZ_CPUY01000023.1 RefSeq gene 944 2368 . + . ID=gene-AD853_RS17210;Name=mdtD;gbkey=Gene;gene=mdtD;gene_biotype=protein_coding;locus_tag=AD853_RS17210;old_locus_tag=ERS008462_03478 NZ_CPUY01000023.1 Protein Homology CDS 944 2368 . + 0 ID=cds-WP_050124630.1;Parent=gene-AD853_RS17210;Dbxref=GenBank:WP_050124630.1;Name=WP_050124630.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=mdtD;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011991004.1;locus_tag=AD853_RS17210;product=multidrug transporter subunit MdtD;protein_id=WP_050124630.1;transl_table=11 NZ_CPUY01000023.1 RefSeq gene 2365 2535 . - . ID=gene-AD853_RS17215;Name=AD853_RS17215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS17215;old_locus_tag=ERS008462_03479 NZ_CPUY01000023.1 Protein Homology CDS 2365 2535 . - 0 ID=cds-WP_002215906.1;Parent=gene-AD853_RS17215;Dbxref=GenBank:WP_002215906.1;Name=WP_002215906.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002215906.1;locus_tag=AD853_RS17215;product=hypothetical protein;protein_id=WP_002215906.1;transl_table=11 NZ_CPUY01000023.1 RefSeq gene 2588 3514 . - . ID=gene-AD853_RS17220;Name=rbsK;gbkey=Gene;gene=rbsK;gene_biotype=protein_coding;locus_tag=AD853_RS17220;old_locus_tag=ERS008462_03480 NZ_CPUY01000023.1 Protein Homology CDS 2588 3514 . - 0 ID=cds-WP_002212251.1;Parent=gene-AD853_RS17220;Dbxref=GenBank:WP_002212251.1;Name=WP_002212251.1;Ontology_term=GO:0006014,GO:0004747;gbkey=CDS;gene=rbsK;go_function=ribokinase activity|0004747||IEA;go_process=D-ribose metabolic process|0006014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304785.1;locus_tag=AD853_RS17220;product=ribokinase;protein_id=WP_002212251.1;transl_table=11 NZ_CPUY01000023.1 RefSeq gene 3565 3984 . - . ID=gene-AD853_RS17225;Name=rbsD;gbkey=Gene;gene=rbsD;gene_biotype=protein_coding;locus_tag=AD853_RS17225;old_locus_tag=ERS008462_03481 NZ_CPUY01000023.1 Protein Homology CDS 3565 3984 . - 0 ID=cds-WP_002212252.1;Parent=gene-AD853_RS17225;Dbxref=GenBank:WP_002212252.1;Name=WP_002212252.1;Ontology_term=GO:0016872;gbkey=CDS;gene=rbsD;go_function=intramolecular lyase activity|0016872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004393068.1;locus_tag=AD853_RS17225;product=D-ribose pyranase;protein_id=WP_002212252.1;transl_table=11 NZ_CPUY01000023.1 RefSeq gene 4189 6057 . - . ID=gene-AD853_RS17230;Name=kup;gbkey=Gene;gene=kup;gene_biotype=protein_coding;locus_tag=AD853_RS17230;old_locus_tag=ERS008462_03482 NZ_CPUY01000023.1 Protein Homology CDS 4189 6057 . - 0 ID=cds-WP_011191440.1;Parent=gene-AD853_RS17230;Dbxref=GenBank:WP_011191440.1;Name=WP_011191440.1;Ontology_term=GO:0015079,GO:0016020;gbkey=CDS;gene=kup;go_component=membrane|0016020||IEA;go_function=potassium ion transmembrane transporter activity|0015079||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462779.1;locus_tag=AD853_RS17230;product=low affinity potassium transporter Kup;protein_id=WP_011191440.1;transl_table=11 NZ_CPUY01000023.1 RefSeq gene 6331 7869 . + . ID=gene-AD853_RS17235;Name=ravA;gbkey=Gene;gene=ravA;gene_biotype=protein_coding;locus_tag=AD853_RS17235;old_locus_tag=ERS008462_03483 NZ_CPUY01000023.1 Protein Homology CDS 6331 7869 . + 0 ID=cds-WP_011991003.1;Parent=gene-AD853_RS17235;Dbxref=GenBank:WP_011991003.1;Name=WP_011991003.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;gene=ravA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002228149.1;locus_tag=AD853_RS17235;product=ATPase RavA;protein_id=WP_011991003.1;transl_table=11 NZ_CPUY01000023.1 RefSeq gene 7873 9339 . + . ID=gene-AD853_RS17240;Name=viaA;gbkey=Gene;gene=viaA;gene_biotype=protein_coding;locus_tag=AD853_RS17240;old_locus_tag=ERS008462_03484 NZ_CPUY01000023.1 Protein Homology CDS 7873 9339 . + 0 ID=cds-WP_050124631.1;Parent=gene-AD853_RS17240;Dbxref=GenBank:WP_050124631.1;Name=WP_050124631.1;gbkey=CDS;gene=viaA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004875728.1;locus_tag=AD853_RS17240;product=ATPase RavA stimulator ViaA;protein_id=WP_050124631.1;transl_table=11 NZ_CPUY01000023.1 RefSeq gene 9438 10430 . - . ID=gene-AD853_RS17245;Name=asnA;gbkey=Gene;gene=asnA;gene_biotype=protein_coding;locus_tag=AD853_RS17245;old_locus_tag=ERS008462_03485 NZ_CPUY01000023.1 Protein Homology CDS 9438 10430 . - 0 ID=cds-WP_002212256.1;Parent=gene-AD853_RS17245;Dbxref=GenBank:WP_002212256.1;Name=WP_002212256.1;Ontology_term=GO:0070981,GO:0004071,GO:0005737;gbkey=CDS;gene=asnA;go_component=cytoplasm|0005737||IEA;go_function=aspartate-ammonia ligase activity|0004071||IEA;go_process=L-asparagine biosynthetic process|0070981||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004703868.1;locus_tag=AD853_RS17245;product=aspartate--ammonia ligase;protein_id=WP_002212256.1;transl_table=11 NZ_CPUY01000023.1 RefSeq gene 10600 11061 . + . ID=gene-AD853_RS17250;Name=asnC;gbkey=Gene;gene=asnC;gene_biotype=protein_coding;locus_tag=AD853_RS17250;old_locus_tag=ERS008462_03486 NZ_CPUY01000023.1 Protein Homology CDS 10600 11061 . + 0 ID=cds-WP_002212257.1;Parent=gene-AD853_RS17250;Dbxref=GenBank:WP_002212257.1;Name=WP_002212257.1;Ontology_term=GO:0043565;gbkey=CDS;gene=asnC;go_function=sequence-specific DNA binding|0043565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002220765.1;locus_tag=AD853_RS17250;product=transcriptional regulator AsnC;protein_id=WP_002212257.1;transl_table=11 NZ_CPUY01000023.1 RefSeq gene 11154 11594 . + . ID=gene-AD853_RS17255;Name=mioC;gbkey=Gene;gene=mioC;gene_biotype=protein_coding;locus_tag=AD853_RS17255;old_locus_tag=ERS008462_03487 NZ_CPUY01000023.1 Protein Homology CDS 11154 11594 . + 0 ID=cds-WP_002212258.1;Parent=gene-AD853_RS17255;Dbxref=GenBank:WP_002212258.1;Name=WP_002212258.1;Ontology_term=GO:0010181;gbkey=CDS;gene=mioC;go_function=FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005271485.1;locus_tag=AD853_RS17255;product=FMN-binding protein MioC;protein_id=WP_002212258.1;transl_table=11 NZ_CPUY01000023.1 RefSeq gene 11975 13864 . + . ID=gene-AD853_RS17260;Name=mnmG;gbkey=Gene;gene=mnmG;gene_biotype=protein_coding;locus_tag=AD853_RS17260;old_locus_tag=ERS008462_03488 NZ_CPUY01000023.1 Protein Homology CDS 11975 13864 . + 0 ID=cds-WP_002212259.1;Parent=gene-AD853_RS17260;Dbxref=GenBank:WP_002212259.1;Name=WP_002212259.1;Ontology_term=GO:0002098,GO:0008033;gbkey=CDS;gene=mnmG;go_process=tRNA wobble uridine modification|0002098||IEA,tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000499793.1;locus_tag=AD853_RS17260;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG;protein_id=WP_002212259.1;transl_table=11 NZ_CPUY01000023.1 RefSeq gene 14010 14630 . + . ID=gene-AD853_RS17265;Name=rsmG;gbkey=Gene;gene=rsmG;gene_biotype=protein_coding;locus_tag=AD853_RS17265;old_locus_tag=ERS008462_03489 NZ_CPUY01000023.1 Protein Homology CDS 14010 14630 . + 0 ID=cds-WP_002212261.1;Parent=gene-AD853_RS17265;Dbxref=GenBank:WP_002212261.1;Name=WP_002212261.1;Ontology_term=GO:0031167,GO:0046118,GO:0008168;gbkey=CDS;gene=rsmG;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA methylation|0031167||IEA,7-methylguanosine biosynthetic process|0046118||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004393048.1;locus_tag=AD853_RS17265;product=16S rRNA (guanine(527)-N(7))-methyltransferase RsmG;protein_id=WP_002212261.1;transl_table=11 NZ_CPUY01000023.1 RefSeq gene 15297 15680 . + . ID=gene-AD853_RS17270;Name=atpI;gbkey=Gene;gene=atpI;gene_biotype=protein_coding;locus_tag=AD853_RS17270;old_locus_tag=ERS008462_03490 NZ_CPUY01000023.1 Protein Homology CDS 15297 15680 . + 0 ID=cds-WP_002212262.1;Parent=gene-AD853_RS17270;Dbxref=GenBank:WP_002212262.1;Name=WP_002212262.1;gbkey=CDS;gene=atpI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002223773.1;locus_tag=AD853_RS17270;product=F0F1 ATP synthase subunit I;protein_id=WP_002212262.1;transl_table=11 NZ_CPUY01000023.1 RefSeq gene 15720 16544 . + . ID=gene-AD853_RS17275;Name=atpB;gbkey=Gene;gene=atpB;gene_biotype=protein_coding;locus_tag=AD853_RS17275;old_locus_tag=ERS008462_03491 NZ_CPUY01000023.1 Protein Homology CDS 15720 16544 . + 0 ID=cds-WP_002228150.1;Parent=gene-AD853_RS17275;Dbxref=GenBank:WP_002228150.1;Name=WP_002228150.1;Ontology_term=GO:0015986,GO:0015078,GO:0045259;gbkey=CDS;gene=atpB;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002228150.1;locus_tag=AD853_RS17275;product=F0F1 ATP synthase subunit A;protein_id=WP_002228150.1;transl_table=11 NZ_CPUY01000023.1 RefSeq gene 16594 16833 . + . ID=gene-AD853_RS17280;Name=atpE;gbkey=Gene;gene=atpE;gene_biotype=protein_coding;locus_tag=AD853_RS17280;old_locus_tag=ERS008462_03492 NZ_CPUY01000023.1 Protein Homology CDS 16594 16833 . + 0 ID=cds-WP_000429386.1;Parent=gene-AD853_RS17280;Dbxref=GenBank:WP_000429386.1;Name=WP_000429386.1;Ontology_term=GO:0015986,GO:0015078;gbkey=CDS;gene=atpE;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246596.1;locus_tag=AD853_RS17280;product=F0F1 ATP synthase subunit C;protein_id=WP_000429386.1;transl_table=11 NZ_CPUY01000023.1 RefSeq gene 16895 17365 . + . ID=gene-AD853_RS17285;Name=atpF;gbkey=Gene;gene=atpF;gene_biotype=protein_coding;locus_tag=AD853_RS17285;old_locus_tag=ERS008462_03493 NZ_CPUY01000023.1 Protein Homology CDS 16895 17365 . + 0 ID=cds-WP_002220762.1;Parent=gene-AD853_RS17285;Dbxref=GenBank:WP_002220762.1;Name=WP_002220762.1;Ontology_term=GO:0015986,GO:0015078;gbkey=CDS;gene=atpF;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001052215.1;locus_tag=AD853_RS17285;product=F0F1 ATP synthase subunit B;protein_id=WP_002220762.1;transl_table=11 NZ_CPUY01000023.1 RefSeq gene 17380 17913 . + . ID=gene-AD853_RS17290;Name=atpH;gbkey=Gene;gene=atpH;gene_biotype=protein_coding;locus_tag=AD853_RS17290;old_locus_tag=ERS008462_03494 NZ_CPUY01000023.1 Protein Homology CDS 17380 17913 . + 0 ID=cds-WP_002220760.1;Parent=gene-AD853_RS17290;Dbxref=GenBank:WP_002220760.1;Name=WP_002220760.1;Ontology_term=GO:0015986,GO:0046933,GO:0016020;gbkey=CDS;gene=atpH;go_component=membrane|0016020||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015966593.1;locus_tag=AD853_RS17290;product=F0F1 ATP synthase subunit delta;protein_id=WP_002220760.1;transl_table=11 NZ_CPUY01000023.1 RefSeq gene 17928 19469 . + . ID=gene-AD853_RS17295;Name=atpA;gbkey=Gene;gene=atpA;gene_biotype=protein_coding;locus_tag=AD853_RS17295;old_locus_tag=ERS008462_03495 NZ_CPUY01000023.1 Protein Homology CDS 17928 19469 . + 0 ID=cds-WP_002220758.1;Parent=gene-AD853_RS17295;Dbxref=GenBank:WP_002220758.1;Name=WP_002220758.1;Ontology_term=GO:0015986,GO:0046933,GO:0045259;gbkey=CDS;gene=atpA;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001176751.1;locus_tag=AD853_RS17295;product=F0F1 ATP synthase subunit alpha;protein_id=WP_002220758.1;transl_table=11 NZ_CPUY01000023.1 RefSeq gene 19531 20394 . + . ID=gene-AD853_RS17300;Name=atpG;gbkey=Gene;gene=atpG;gene_biotype=protein_coding;locus_tag=AD853_RS17300;old_locus_tag=ERS008462_03496 NZ_CPUY01000023.1 Protein Homology CDS 19531 20394 . + 0 ID=cds-WP_002220756.1;Parent=gene-AD853_RS17300;Dbxref=GenBank:WP_002220756.1;Name=WP_002220756.1;Ontology_term=GO:0015986,GO:0046933,GO:0045259;gbkey=CDS;gene=atpG;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020882764.1;locus_tag=AD853_RS17300;product=F0F1 ATP synthase subunit gamma;protein_id=WP_002220756.1;transl_table=11 NZ_CPUY01000023.1 RefSeq gene 20550 21932 . + . ID=gene-AD853_RS17305;Name=atpD;gbkey=Gene;gene=atpD;gene_biotype=protein_coding;locus_tag=AD853_RS17305;old_locus_tag=ERS008462_03497 NZ_CPUY01000023.1 Protein Homology CDS 20550 21932 . + 0 ID=cds-WP_002220753.1;Parent=gene-AD853_RS17305;Dbxref=GenBank:WP_002220753.1;Name=WP_002220753.1;Ontology_term=GO:0015986,GO:0046933,GO:0045259;gbkey=CDS;gene=atpD;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312701.1;locus_tag=AD853_RS17305;product=F0F1 ATP synthase subunit beta;protein_id=WP_002220753.1;transl_table=11 NZ_CPUY01000023.1 RefSeq gene 21954 22376 . + . ID=gene-AD853_RS17310;Name=AD853_RS17310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS17310;old_locus_tag=ERS008462_03498 NZ_CPUY01000023.1 Protein Homology CDS 21954 22376 . + 0 ID=cds-WP_002215546.1;Parent=gene-AD853_RS17310;Dbxref=GenBank:WP_002215546.1;Name=WP_002215546.1;Ontology_term=GO:0015986,GO:0046933;gbkey=CDS;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002215546.1;locus_tag=AD853_RS17310;product=F0F1 ATP synthase subunit epsilon;protein_id=WP_002215546.1;transl_table=11 NZ_CPUY01000023.1 RefSeq gene 22997 24367 . + . ID=gene-AD853_RS17315;Name=glmU;gbkey=Gene;gene=glmU;gene_biotype=protein_coding;locus_tag=AD853_RS17315;old_locus_tag=ERS008462_03499 NZ_CPUY01000023.1 Protein Homology CDS 22997 24367 . + 0 ID=cds-WP_038824748.1;Parent=gene-AD853_RS17315;Dbxref=GenBank:WP_038824748.1;Name=WP_038824748.1;Ontology_term=GO:0000902,GO:0006048,GO:0009252,GO:0000287,GO:0003977,GO:0019134;gbkey=CDS;gene=glmU;go_function=magnesium ion binding|0000287||IEA,UDP-N-acetylglucosamine diphosphorylase activity|0003977||IEA,glucosamine-1-phosphate N-acetyltransferase activity|0019134||IEA;go_process=cell morphogenesis|0000902||IEA,UDP-N-acetylglucosamine biosynthetic process|0006048||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002215550.1;locus_tag=AD853_RS17315;product=bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU;protein_id=WP_038824748.1;transl_table=11 NZ_CPUY01000023.1 RefSeq gene 24568 26397 . + . ID=gene-AD853_RS17320;Name=glmS;gbkey=Gene;gene=glmS;gene_biotype=protein_coding;locus_tag=AD853_RS17320;old_locus_tag=ERS008462_03500 NZ_CPUY01000023.1 Protein Homology CDS 24568 26397 . + 0 ID=cds-WP_002215552.1;Parent=gene-AD853_RS17320;Dbxref=GenBank:WP_002215552.1;Name=WP_002215552.1;Ontology_term=GO:1901137,GO:0004360;gbkey=CDS;gene=glmS;go_function=glutamine-fructose-6-phosphate transaminase (isomerizing) activity|0004360||IEA;go_process=carbohydrate derivative biosynthetic process|1901137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709542.1;locus_tag=AD853_RS17320;product=glutamine--fructose-6-phosphate transaminase (isomerizing);protein_id=WP_002215552.1;transl_table=11 NZ_CPUY01000023.1 RefSeq gene 26880 27920 . + . ID=gene-AD853_RS17325;Name=pstS;gbkey=Gene;gene=pstS;gene_biotype=protein_coding;locus_tag=AD853_RS17325;old_locus_tag=ERS008462_03502 NZ_CPUY01000023.1 Protein Homology CDS 26880 27920 . + 0 ID=cds-WP_002215557.1;Parent=gene-AD853_RS17325;Dbxref=GenBank:WP_002215557.1;Name=WP_002215557.1;Ontology_term=GO:0035435,GO:0042301,GO:0043190;gbkey=CDS;gene=pstS;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=phosphate ion binding|0042301||IEA;go_process=phosphate ion transmembrane transport|0035435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462756.1;locus_tag=AD853_RS17325;product=phosphate ABC transporter substrate-binding protein PstS;protein_id=WP_002215557.1;transl_table=11 NZ_CPUY01000023.1 RefSeq gene 28143 29099 . + . ID=gene-AD853_RS17330;Name=pstC;gbkey=Gene;gene=pstC;gene_biotype=protein_coding;locus_tag=AD853_RS17330;old_locus_tag=ERS008462_03503 NZ_CPUY01000023.1 Protein Homology CDS 28143 29099 . + 0 ID=cds-WP_002215558.1;Parent=gene-AD853_RS17330;Dbxref=GenBank:WP_002215558.1;Name=WP_002215558.1;Ontology_term=GO:0006817,GO:0055085,GO:0016020;gbkey=CDS;gene=pstC;go_component=membrane|0016020||IEA;go_process=phosphate ion transport|0006817||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002215558.1;locus_tag=AD853_RS17330;product=phosphate ABC transporter permease PstC;protein_id=WP_002215558.1;transl_table=11 NZ_CPUY01000023.1 RefSeq gene 29101 29988 . + . ID=gene-AD853_RS17335;Name=pstA;gbkey=Gene;gene=pstA;gene_biotype=protein_coding;locus_tag=AD853_RS17335;old_locus_tag=ERS008462_03504 NZ_CPUY01000023.1 Protein Homology CDS 29101 29988 . + 0 ID=cds-WP_012105988.1;Parent=gene-AD853_RS17335;Dbxref=GenBank:WP_012105988.1;Name=WP_012105988.1;Ontology_term=GO:0035435,GO:0005886;gbkey=CDS;gene=pstA;go_component=plasma membrane|0005886||IEA;go_process=phosphate ion transmembrane transport|0035435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002215560.1;locus_tag=AD853_RS17335;product=phosphate ABC transporter permease PstA;protein_id=WP_012105988.1;transl_table=11 NZ_CPUY01000023.1 RefSeq gene 30069 30845 . + . ID=gene-AD853_RS17340;Name=pstB;gbkey=Gene;gene=pstB;gene_biotype=protein_coding;locus_tag=AD853_RS17340;old_locus_tag=ERS008462_03505 NZ_CPUY01000023.1 Protein Homology CDS 30069 30845 . + 0 ID=cds-WP_002215562.1;Parent=gene-AD853_RS17340;Dbxref=GenBank:WP_002215562.1;Name=WP_002215562.1;Ontology_term=GO:0006817,GO:0005524,GO:0015415,GO:0009898,GO:0055052;gbkey=CDS;gene=pstB;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled phosphate ion transmembrane transporter activity|0015415||IEA;go_process=phosphate ion transport|0006817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004718216.1;locus_tag=AD853_RS17340;product=phosphate ABC transporter ATP-binding protein PstB;protein_id=WP_002215562.1;transl_table=11 NZ_CPUY01000023.1 RefSeq gene 30933 31655 . + . ID=gene-AD853_RS17345;Name=phoU;gbkey=Gene;gene=phoU;gene_biotype=protein_coding;locus_tag=AD853_RS17345;old_locus_tag=ERS008462_03506 NZ_CPUY01000023.1 Protein Homology CDS 30933 31655 . + 0 ID=cds-WP_002220747.1;Parent=gene-AD853_RS17345;Dbxref=GenBank:WP_002220747.1;Name=WP_002220747.1;Ontology_term=GO:0030643;gbkey=CDS;gene=phoU;go_process=intracellular phosphate ion homeostasis|0030643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016674035.1;locus_tag=AD853_RS17345;product=phosphate signaling complex protein PhoU;protein_id=WP_002220747.1;transl_table=11 NZ_CPUY01000023.1 RefSeq gene 31953 32624 . + . ID=gene-AD853_RS17350;Name=AD853_RS17350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS17350;old_locus_tag=ERS008462_03507 NZ_CPUY01000023.1 Protein Homology CDS 31953 32624 . + 0 ID=cds-WP_050124632.1;Parent=gene-AD853_RS17350;Dbxref=GenBank:WP_050124632.1;Name=WP_050124632.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016583547.1;locus_tag=AD853_RS17350;product=bactofilin family protein;protein_id=WP_050124632.1;transl_table=11 NZ_CPUY01000023.1 RefSeq gene 32876 33697 . + . ID=gene-AD853_RS17355;Name=AD853_RS17355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS17355;old_locus_tag=ERS008462_03508 NZ_CPUY01000023.1 Protein Homology CDS 32876 33697 . + 0 ID=cds-WP_038834322.1;Parent=gene-AD853_RS17355;Dbxref=GenBank:WP_038834322.1;Name=WP_038834322.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012004493.1;locus_tag=AD853_RS17355;product=ABC transporter substrate-binding protein;protein_id=WP_038834322.1;transl_table=11 NZ_CPUY01000023.1 RefSeq gene 33880 34617 . + . ID=gene-AD853_RS17360;Name=AD853_RS17360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS17360;old_locus_tag=ERS008462_03509 NZ_CPUY01000023.1 Protein Homology CDS 33880 34617 . + 0 ID=cds-WP_012105986.1;Parent=gene-AD853_RS17360;Dbxref=GenBank:WP_012105986.1;Name=WP_012105986.1;Ontology_term=GO:0006865,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004875705.1;locus_tag=AD853_RS17360;product=amino acid ABC transporter permease;protein_id=WP_012105986.1;transl_table=11 NZ_CPUY01000023.1 RefSeq gene 34619 35374 . + . ID=gene-AD853_RS17365;Name=AD853_RS17365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS17365;old_locus_tag=ERS008462_03510 NZ_CPUY01000023.1 Protein Homology CDS 34619 35374 . + 0 ID=cds-WP_012105985.1;Parent=gene-AD853_RS17365;Dbxref=GenBank:WP_012105985.1;Name=WP_012105985.1;Ontology_term=GO:0006865,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011193355.1;locus_tag=AD853_RS17365;product=amino acid ABC transporter permease;protein_id=WP_012105985.1;transl_table=11 NZ_CPUY01000023.1 RefSeq gene 35409 36077 . - . ID=gene-AD853_RS17370;Name=yieH;gbkey=Gene;gene=yieH;gene_biotype=protein_coding;locus_tag=AD853_RS17370;old_locus_tag=ERS008462_03511 NZ_CPUY01000023.1 Protein Homology CDS 35409 36077 . - 0 ID=cds-WP_011193354.1;Parent=gene-AD853_RS17370;Dbxref=GenBank:WP_011193354.1;Name=WP_011193354.1;gbkey=CDS;gene=yieH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002215575.1;locus_tag=AD853_RS17370;product=6-phosphogluconate phosphatase;protein_id=WP_011193354.1;transl_table=11 NZ_CPUY01000023.1 RefSeq gene 36152 36250 . - . ID=gene-AD853_RS21635;Name=AD853_RS21635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS21635 NZ_CPUY01000023.1 Protein Homology CDS 36152 36250 . - 0 ID=cds-WP_071525562.1;Parent=gene-AD853_RS21635;Dbxref=GenBank:WP_071525562.1;Name=WP_071525562.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002430096.1;locus_tag=AD853_RS21635;product=gluconate 5-dehydrogenase;protein_id=WP_071525562.1;transl_table=11 NZ_CPUY01000023.1 RefSeq gene 36570 37898 . + . ID=gene-AD853_RS17375;Name=AD853_RS17375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS17375;old_locus_tag=ERS008462_03512 NZ_CPUY01000023.1 Protein Homology CDS 36570 37898 . + 0 ID=cds-WP_038824371.1;Parent=gene-AD853_RS17375;Dbxref=GenBank:WP_038824371.1;Name=WP_038824371.1;Ontology_term=GO:0015851,GO:0015205,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=nucleobase transmembrane transporter activity|0015205||IEA;go_process=nucleobase transport|0015851||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005175146.1;locus_tag=AD853_RS17375;product=NCS2 family permease;protein_id=WP_038824371.1;transl_table=11 NZ_CPUY01000023.1 RefSeq pseudogene 38071 38207 . - . ID=gene-AD853_RS22705;Name=AD853_RS22705;end_range=38207,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD853_RS22705;partial=true;pseudo=true;start_range=.,38071 NZ_CPUY01000023.1 Protein Homology CDS 38071 38207 . - 0 ID=cds-AD853_RS22705;Parent=gene-AD853_RS22705;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=38207,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020324562.1;locus_tag=AD853_RS22705;partial=true;product=IS6 family transposase;pseudo=true;start_range=.,38071;transl_table=11 NZ_CPUY01000023.1 RefSeq gene 38449 39069 . + . ID=gene-AD853_RS17380;Name=AD853_RS17380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS17380;old_locus_tag=ERS008462_03513 NZ_CPUY01000023.1 Protein Homology CDS 38449 39069 . + 0 ID=cds-WP_038824370.1;Parent=gene-AD853_RS17380;Dbxref=GenBank:WP_038824370.1;Name=WP_038824370.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002215581.1;locus_tag=AD853_RS17380;product=hypothetical protein;protein_id=WP_038824370.1;transl_table=11 NZ_CPUY01000023.1 RefSeq gene 39131 39412 . + . ID=gene-AD853_RS17385;Name=AD853_RS17385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS17385;old_locus_tag=ERS008462_03514 NZ_CPUY01000023.1 Protein Homology CDS 39131 39412 . + 0 ID=cds-WP_002215583.1;Parent=gene-AD853_RS17385;Dbxref=GenBank:WP_002215583.1;Name=WP_002215583.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011193351.1;locus_tag=AD853_RS17385;product=hypothetical protein;protein_id=WP_002215583.1;transl_table=11 NZ_CPUY01000023.1 RefSeq gene 39504 39797 . + . ID=gene-AD853_RS21015;Name=AD853_RS21015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS21015 NZ_CPUY01000023.1 Protein Homology CDS 39504 39797 . + 0 ID=cds-WP_080984337.1;Parent=gene-AD853_RS21015;Dbxref=GenBank:WP_080984337.1;Name=WP_080984337.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018538.6;locus_tag=AD853_RS21015;product=DUF1240 domain-containing protein;protein_id=WP_080984337.1;transl_table=11 NZ_CPUY01000023.1 RefSeq gene 39880 41079 . - . ID=gene-AD853_RS17390;Name=fabV;gbkey=Gene;gene=fabV;gene_biotype=protein_coding;locus_tag=AD853_RS17390;old_locus_tag=ERS008462_03515 NZ_CPUY01000023.1 Protein Homology CDS 39880 41079 . - 0 ID=cds-WP_002215588.1;Parent=gene-AD853_RS17390;Dbxref=GenBank:WP_002215588.1;Name=WP_002215588.1;Ontology_term=GO:0006633,GO:0004318;gbkey=CDS;gene=fabV;go_function=enoyl-[acyl-carrier-protein] reductase (NADH) activity|0004318||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011171985.1;locus_tag=AD853_RS17390;product=enoyl-ACP reductase FabV;protein_id=WP_002215588.1;transl_table=11 NZ_CPUY01000023.1 RefSeq gene 41286 42650 . - . ID=gene-AD853_RS17395;Name=mnmE;gbkey=Gene;gene=mnmE;gene_biotype=protein_coding;locus_tag=AD853_RS17395;old_locus_tag=ERS008462_03516 NZ_CPUY01000023.1 Protein Homology CDS 41286 42650 . - 0 ID=cds-WP_012304789.1;Parent=gene-AD853_RS17395;Dbxref=GenBank:WP_012304789.1;Name=WP_012304789.1;Ontology_term=GO:0006400,GO:0003924,GO:0005515,GO:0005525;gbkey=CDS;gene=mnmE;go_function=GTPase activity|0003924||IEA,protein binding|0005515||IEA,GTP binding|0005525||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015848543.1;locus_tag=AD853_RS17395;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE;protein_id=WP_012304789.1;transl_table=11 NZ_CPUY01000023.1 RefSeq gene 42793 44433 . - . ID=gene-AD853_RS17400;Name=yidC;gbkey=Gene;gene=yidC;gene_biotype=protein_coding;locus_tag=AD853_RS17400;old_locus_tag=ERS008462_03517 NZ_CPUY01000023.1 Protein Homology CDS 42793 44433 . - 0 ID=cds-WP_002220739.1;Parent=gene-AD853_RS17400;Dbxref=GenBank:WP_002220739.1;Name=WP_002220739.1;Ontology_term=GO:0032977,GO:0016020;gbkey=CDS;gene=yidC;go_component=membrane|0016020||IEA;go_function=membrane insertase activity|0032977||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002220739.1;locus_tag=AD853_RS17400;product=membrane protein insertase YidC;protein_id=WP_002220739.1;transl_table=11 NZ_CPUY01000023.1 RefSeq gene 44436 44693 . - . ID=gene-AD853_RS21020;Name=yidD;gbkey=Gene;gene=yidD;gene_biotype=protein_coding;locus_tag=AD853_RS21020;old_locus_tag=ERS008462_03518 NZ_CPUY01000023.1 Protein Homology CDS 44436 44693 . - 0 ID=cds-WP_002228756.1;Parent=gene-AD853_RS21020;Dbxref=GenBank:WP_002228756.1;Name=WP_002228756.1;gbkey=CDS;gene=yidD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012368639.1;locus_tag=AD853_RS21020;product=membrane protein insertion efficiency factor YidD;protein_id=WP_002228756.1;transl_table=11 NZ_CPUY01000023.1 RefSeq gene 44657 45016 . - . ID=gene-AD853_RS17405;Name=rnpA;gbkey=Gene;gene=rnpA;gene_biotype=protein_coding;locus_tag=AD853_RS17405;old_locus_tag=ERS008462_03519 NZ_CPUY01000023.1 Protein Homology CDS 44657 45016 . - 0 ID=cds-WP_002228153.1;Parent=gene-AD853_RS17405;Dbxref=GenBank:WP_002228153.1;Name=WP_002228153.1;Ontology_term=GO:0008033,GO:0000049,GO:0004526;gbkey=CDS;gene=rnpA;go_function=tRNA binding|0000049||IEA,ribonuclease P activity|0004526||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014172301.1;locus_tag=AD853_RS17405;product=ribonuclease P protein component;protein_id=WP_002228153.1;transl_table=11 NZ_CPUY01000023.1 RefSeq gene 45035 45175 . - . ID=gene-AD853_RS17410;Name=rpmH;gbkey=Gene;gene=rpmH;gene_biotype=protein_coding;locus_tag=AD853_RS17410;old_locus_tag=ERS008462_03520 NZ_CPUY01000023.1 Protein Homology CDS 45035 45175 . - 0 ID=cds-WP_002220736.1;Parent=gene-AD853_RS17410;Dbxref=GenBank:WP_002220736.1;Name=WP_002220736.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmH;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001686914.1;locus_tag=AD853_RS17410;product=50S ribosomal protein L34;protein_id=WP_002220736.1;transl_table=11 NZ_CPUY01000023.1 RefSeq gene 45891 47279 . + . ID=gene-AD853_RS17415;Name=dnaA;gbkey=Gene;gene=dnaA;gene_biotype=protein_coding;locus_tag=AD853_RS17415;old_locus_tag=ERS008462_03522 NZ_CPUY01000023.1 Protein Homology CDS 45891 47279 . + 0 ID=cds-WP_038824369.1;Parent=gene-AD853_RS17415;Dbxref=GenBank:WP_038824369.1;Name=WP_038824369.1;Ontology_term=GO:0006270,GO:0006275,GO:0003677,GO:0003688,GO:0005524;gbkey=CDS;gene=dnaA;go_function=DNA binding|0003677||IEA,DNA replication origin binding|0003688||IEA,ATP binding|0005524||IEA;go_process=DNA replication initiation|0006270||IEA,regulation of DNA replication|0006275||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004161180.1;locus_tag=AD853_RS17415;product=chromosomal replication initiator protein DnaA;protein_id=WP_038824369.1;transl_table=11 NZ_CPUY01000023.1 RefSeq gene 47284 48384 . + . ID=gene-AD853_RS17420;Name=dnaN;gbkey=Gene;gene=dnaN;gene_biotype=protein_coding;locus_tag=AD853_RS17420;old_locus_tag=ERS008462_03523 NZ_CPUY01000023.1 Protein Homology CDS 47284 48384 . + 0 ID=cds-WP_038824367.1;Parent=gene-AD853_RS17420;Dbxref=GenBank:WP_038824367.1;Name=WP_038824367.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887,GO:0009360;gbkey=CDS;gene=dnaN;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006177590.1;locus_tag=AD853_RS17420;product=DNA polymerase III subunit beta;protein_id=WP_038824367.1;transl_table=11 NZ_CPUY01000023.1 RefSeq gene 48388 48558 . - . ID=gene-AD853_RS17425;Name=AD853_RS17425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS17425 NZ_CPUY01000023.1 GeneMarkS-2+ CDS 48388 48558 . - 0 ID=cds-WP_002218418.1;Parent=gene-AD853_RS17425;Dbxref=GenBank:WP_002218418.1;Name=WP_002218418.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AD853_RS17425;product=hypothetical protein;protein_id=WP_002218418.1;transl_table=11 NZ_CPUY01000023.1 RefSeq gene 48557 49642 . + . ID=gene-AD853_RS17430;Name=recF;gbkey=Gene;gene=recF;gene_biotype=protein_coding;locus_tag=AD853_RS17430;old_locus_tag=ERS008462_03524 NZ_CPUY01000023.1 Protein Homology CDS 48557 49642 . + 0 ID=cds-WP_038824365.1;Parent=gene-AD853_RS17430;Dbxref=GenBank:WP_038824365.1;Name=WP_038824365.1;Note=All proteins in this family for which functions are known are DNA-binding proteins that assist the filamentation of RecA onto DNA for the initiation of recombination or recombinational repair.;Ontology_term=GO:0006260,GO:0006281,GO:0006310,GO:0009432,GO:0003697,GO:0005524;gbkey=CDS;gene=recF;go_function=single-stranded DNA binding|0003697||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA,DNA recombination|0006310||IEA,SOS response|0009432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004875688.1;locus_tag=AD853_RS17430;product=DNA replication/repair protein RecF;protein_id=WP_038824365.1;transl_table=11 NZ_CPUY01000023.1 RefSeq gene 49662 52076 . + . ID=gene-AD853_RS17435;Name=gyrB;gbkey=Gene;gene=gyrB;gene_biotype=protein_coding;locus_tag=AD853_RS17435;old_locus_tag=ERS008462_03525 NZ_CPUY01000023.1 Protein Homology CDS 49662 52076 . + 0 ID=cds-WP_002209642.1;Parent=gene-AD853_RS17435;Dbxref=GenBank:WP_002209642.1;Name=WP_002209642.1;Ontology_term=GO:0006265,GO:0003677,GO:0003918,GO:0005524,GO:0005694;gbkey=CDS;gene=gyrB;go_component=chromosome|0005694||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA,ATP binding|0005524||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121480.1;locus_tag=AD853_RS17435;product=DNA topoisomerase (ATP-hydrolyzing) subunit B;protein_id=WP_002209642.1;transl_table=11 NZ_CPUY01000023.1 RefSeq gene 52291 53100 . + . ID=gene-AD853_RS17440;Name=yidA;gbkey=Gene;gene=yidA;gene_biotype=protein_coding;locus_tag=AD853_RS17440;old_locus_tag=ERS008462_03526 NZ_CPUY01000023.1 Protein Homology CDS 52291 53100 . + 0 ID=cds-WP_011193349.1;Parent=gene-AD853_RS17440;Dbxref=GenBank:WP_011193349.1;Name=WP_011193349.1;Ontology_term=GO:0016787;gbkey=CDS;gene=yidA;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209641.1;locus_tag=AD853_RS17440;product=sugar-phosphatase;protein_id=WP_011193349.1;transl_table=11 ##sequence-region NZ_CPUY01000024.1 1 45705 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=633 NZ_CPUY01000024.1 RefSeq region 1 45705 . + . ID=NZ_CPUY01000024.1:1..45705;Dbxref=taxon:633;collection-date=1900/2008;country=South Africa;gbkey=Src;genome=genomic;isolation-source=not known;mol_type=genomic DNA;nat-host=pig;serovar=O:3;strain=IP32544 NZ_CPUY01000024.1 RefSeq gene 250 1479 . + . ID=gene-AD853_RS17445;Name=AD853_RS17445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS17445;old_locus_tag=ERS008462_03527 NZ_CPUY01000024.1 Protein Homology CDS 250 1479 . + 0 ID=cds-WP_038824166.1;Parent=gene-AD853_RS17445;Dbxref=GenBank:WP_038824166.1;Name=WP_038824166.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012303331.1;locus_tag=AD853_RS17445;product=MFS transporter;protein_id=WP_038824166.1;transl_table=11 NZ_CPUY01000024.1 RefSeq gene 1628 1831 . - . ID=gene-AD853_RS17450;Name=AD853_RS17450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS17450;old_locus_tag=ERS008462_03528 NZ_CPUY01000024.1 Protein Homology CDS 1628 1831 . - 0 ID=cds-WP_038824168.1;Parent=gene-AD853_RS17450;Dbxref=GenBank:WP_038824168.1;Name=WP_038824168.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209605.1;locus_tag=AD853_RS17450;product=hypothetical protein;protein_id=WP_038824168.1;transl_table=11 NZ_CPUY01000024.1 RefSeq gene 1952 2110 . + . ID=gene-AD853_RS21900;Name=AD853_RS21900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS21900;old_locus_tag=ERS008462_03529 NZ_CPUY01000024.1 Protein Homology CDS 1952 2110 . + 0 ID=cds-WP_002215752.1;Parent=gene-AD853_RS21900;Dbxref=GenBank:WP_002215752.1;Name=WP_002215752.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002215752.1;locus_tag=AD853_RS21900;product=hypothetical protein;protein_id=WP_002215752.1;transl_table=11 NZ_CPUY01000024.1 RefSeq pseudogene 2189 2759 . + . ID=gene-AD853_RS17460;Name=AD853_RS17460;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD853_RS17460;old_locus_tag=ERS008462_03530;pseudo=true NZ_CPUY01000024.1 Protein Homology CDS 2189 2759 . + 0 ID=cds-AD853_RS17460;Parent=gene-AD853_RS17460;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011193347.1;locus_tag=AD853_RS17460;product=DUF4225 domain-containing protein;pseudo=true;transl_table=11 NZ_CPUY01000024.1 RefSeq pseudogene 2773 3104 . - . ID=gene-AD853_RS17465;Name=AD853_RS17465;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD853_RS17465;pseudo=true NZ_CPUY01000024.1 Protein Homology CDS 2773 3104 . - 0 ID=cds-AD853_RS17465;Parent=gene-AD853_RS17465;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011193346.1;locus_tag=AD853_RS17465;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CPUY01000024.1 RefSeq pseudogene 3372 3773 . + . ID=gene-AD853_RS17470;Name=AD853_RS17470;end_range=3773,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD853_RS17470;old_locus_tag=ERS008462_03531;partial=true;pseudo=true;start_range=.,3372 NZ_CPUY01000024.1 Protein Homology CDS 3372 3773 . + 0 ID=cds-AD853_RS17470;Parent=gene-AD853_RS17470;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=3773,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611787.1;locus_tag=AD853_RS17470;partial=true;product=Tn3 family transposase;pseudo=true;start_range=.,3372;transl_table=11 NZ_CPUY01000024.1 RefSeq gene 3864 5837 . - . ID=gene-AD853_RS17475;Name=selB;gbkey=Gene;gene=selB;gene_biotype=protein_coding;locus_tag=AD853_RS17475;old_locus_tag=ERS008462_03532 NZ_CPUY01000024.1 Protein Homology CDS 3864 5837 . - 0 ID=cds-WP_012303327.1;Parent=gene-AD853_RS17475;Dbxref=GenBank:WP_012303327.1;Name=WP_012303327.1;Ontology_term=GO:0001514,GO:0003723,GO:0003746,GO:0003924,GO:0005525,GO:0005737;gbkey=CDS;gene=selB;go_component=cytoplasm|0005737||IEA;go_function=RNA binding|0003723||IEA,translation elongation factor activity|0003746||IEA,GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=selenocysteine incorporation|0001514||IEA;inference=COORDINATES: protein motif:HMM:TIGR00475.1;locus_tag=AD853_RS17475;product=selenocysteine-specific translation elongation factor;protein_id=WP_012303327.1;transl_table=11 NZ_CPUY01000024.1 RefSeq gene 5834 7222 . - . ID=gene-AD853_RS17480;Name=selA;gbkey=Gene;gene=selA;gene_biotype=protein_coding;locus_tag=AD853_RS17480;old_locus_tag=ERS008462_03533 NZ_CPUY01000024.1 Protein Homology CDS 5834 7222 . - 0 ID=cds-WP_011193344.1;Parent=gene-AD853_RS17480;Dbxref=GenBank:WP_011193344.1;Name=WP_011193344.1;Ontology_term=GO:0001514,GO:0004125,GO:0005737;gbkey=CDS;gene=selA;go_component=cytoplasm|0005737||IEA;go_function=L-seryl-tRNA(Sec) selenium transferase activity|0004125||IEA;go_process=selenocysteine incorporation|0001514||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209608.1;locus_tag=AD853_RS17480;product=L-seryl-tRNA(Sec) selenium transferase;protein_id=WP_011193344.1;transl_table=11 NZ_CPUY01000024.1 RefSeq gene 7408 8337 . - . ID=gene-AD853_RS17485;Name=fdhE;gbkey=Gene;gene=fdhE;gene_biotype=protein_coding;locus_tag=AD853_RS17485;old_locus_tag=ERS008462_03534 NZ_CPUY01000024.1 Protein Homology CDS 7408 8337 . - 0 ID=cds-WP_002209609.1;Parent=gene-AD853_RS17485;Dbxref=GenBank:WP_002209609.1;Name=WP_002209609.1;gbkey=CDS;gene=fdhE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005271637.1;locus_tag=AD853_RS17485;product=formate dehydrogenase accessory protein FdhE;protein_id=WP_002209609.1;transl_table=11 NZ_CPUY01000024.1 RefSeq gene 8337 9011 . - . ID=gene-AD853_RS17490;Name=fdoI;gbkey=Gene;gene=fdoI;gene_biotype=protein_coding;locus_tag=AD853_RS17490;old_locus_tag=ERS008462_03535 NZ_CPUY01000024.1 Protein Homology CDS 8337 9011 . - 0 ID=cds-WP_038824170.1;Parent=gene-AD853_RS17490;Dbxref=GenBank:WP_038824170.1;Name=WP_038824170.1;gbkey=CDS;gene=fdoI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011193343.1;locus_tag=AD853_RS17490;product=formate dehydrogenase cytochrome b556 subunit;protein_id=WP_038824170.1;transl_table=11 NZ_CPUY01000024.1 RefSeq gene 9008 9979 . - . ID=gene-AD853_RS17495;Name=fdxH;gbkey=Gene;gene=fdxH;gene_biotype=protein_coding;locus_tag=AD853_RS17495;old_locus_tag=ERS008462_03536 NZ_CPUY01000024.1 Protein Homology CDS 9008 9979 . - 0 ID=cds-WP_038824171.1;Parent=gene-AD853_RS17495;Dbxref=GenBank:WP_038824171.1;Name=WP_038824171.1;Ontology_term=GO:0015944,GO:0008863,GO:0051539,GO:0016020;gbkey=CDS;gene=fdxH;go_component=membrane|0016020||IEA;go_function=formate dehydrogenase (NAD+) activity|0008863||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=formate oxidation|0015944||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209611.1;locus_tag=AD853_RS17495;product=formate dehydrogenase subunit beta;protein_id=WP_038824171.1;transl_table=11 NZ_CPUY01000024.1 RefSeq gene 9992 13039 . - . ID=gene-AD853_RS17500;Name=fdnG;gbkey=Gene;gene=fdnG;gene_biotype=protein_coding;locus_tag=AD853_RS17500 NZ_CPUY01000024.1 Protein Homology CDS 9992 13039 . - 0 ID=cds-WP_024063505.1;Parent=gene-AD853_RS17500;Dbxref=GenBank:WP_024063505.1;Name=WP_024063505.1;Ontology_term=GO:0015942,GO:0008863,GO:0009055,GO:0043546,GO:0047111,GO:0009326;gbkey=CDS;gene=fdnG;go_component=formate dehydrogenase complex|0009326||IEA;go_function=formate dehydrogenase (NAD+) activity|0008863||IEA,electron transfer activity|0009055||IEA,molybdopterin cofactor binding|0043546||IEA,formate dehydrogenase (cytochrome-c-553) activity|0047111||IEA;go_process=formate metabolic process|0015942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418330.1;locus_tag=AD853_RS17500;product=formate dehydrogenase-N subunit alpha;protein_id=WP_024063505.1;transl_except=(pos:complement(12452..12454)%2Caa:Sec);transl_table=11 NZ_CPUY01000024.1 RefSeq gene 13236 14060 . + . ID=gene-AD853_RS17510;Name=fdhD;gbkey=Gene;gene=fdhD;gene_biotype=protein_coding;locus_tag=AD853_RS17510;old_locus_tag=ERS008462_03538 NZ_CPUY01000024.1 Protein Homology CDS 13236 14060 . + 0 ID=cds-WP_012303325.1;Parent=gene-AD853_RS17510;Dbxref=GenBank:WP_012303325.1;Name=WP_012303325.1;Ontology_term=GO:0009061,GO:0015942,GO:0016783,GO:0009326;gbkey=CDS;gene=fdhD;go_component=formate dehydrogenase complex|0009326||IEA;go_function=sulfurtransferase activity|0016783||IEA;go_process=anaerobic respiration|0009061||IEA,formate metabolic process|0015942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011193341.1;locus_tag=AD853_RS17510;product=formate dehydrogenase accessory sulfurtransferase FdhD;protein_id=WP_012303325.1;transl_table=11 NZ_CPUY01000024.1 RefSeq gene 14475 15098 . + . ID=gene-AD853_RS17515;Name=sodA;gbkey=Gene;gene=sodA;gene_biotype=protein_coding;locus_tag=AD853_RS17515;old_locus_tag=ERS008462_03539 NZ_CPUY01000024.1 Protein Homology CDS 14475 15098 . + 0 ID=cds-WP_002209614.1;Parent=gene-AD853_RS17515;Dbxref=GenBank:WP_002209614.1;Name=WP_002209614.1;Ontology_term=GO:0006801,GO:0004784;gbkey=CDS;gene=sodA;go_function=superoxide dismutase activity|0004784||IEA;go_process=superoxide metabolic process|0006801||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013650637.1;locus_tag=AD853_RS17515;product=superoxide dismutase [Mn];protein_id=WP_002209614.1;transl_table=11 NZ_CPUY01000024.1 RefSeq gene 15442 17391 . + . ID=gene-AD853_RS17520;Name=AD853_RS17520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS17520;old_locus_tag=ERS008462_03540 NZ_CPUY01000024.1 Protein Homology CDS 15442 17391 . + 0 ID=cds-WP_011193340.1;Parent=gene-AD853_RS17520;Dbxref=GenBank:WP_011193340.1;Name=WP_011193340.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011193340.1;locus_tag=AD853_RS17520;product=methyl-accepting chemotaxis protein;protein_id=WP_011193340.1;transl_table=11 NZ_CPUY01000024.1 RefSeq pseudogene 17628 17910 . + . ID=gene-AD853_RS22330;Name=AD853_RS22330;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD853_RS22330;pseudo=true NZ_CPUY01000024.1 Protein Homology CDS 17628 17910 . + 0 ID=cds-AD853_RS22330;Parent=gene-AD853_RS22330;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012414132.1;locus_tag=AD853_RS22330;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CPUY01000024.1 RefSeq gene 18441 18917 . + . ID=gene-AD853_RS17530;Name=AD853_RS17530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS17530;old_locus_tag=ERS008462_03542 NZ_CPUY01000024.1 Protein Homology CDS 18441 18917 . + 0 ID=cds-WP_002209617.1;Parent=gene-AD853_RS17530;Dbxref=GenBank:WP_002209617.1;Name=WP_002209617.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209617.1;locus_tag=AD853_RS17530;product=DM13 domain-containing protein;protein_id=WP_002209617.1;transl_table=11 NZ_CPUY01000024.1 RefSeq gene 19086 19442 . - . ID=gene-AD853_RS17535;Name=AD853_RS17535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS17535;old_locus_tag=ERS008462_03543 NZ_CPUY01000024.1 Protein Homology CDS 19086 19442 . - 0 ID=cds-WP_038824172.1;Parent=gene-AD853_RS17535;Dbxref=GenBank:WP_038824172.1;Name=WP_038824172.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209618.1;locus_tag=AD853_RS17535;product=YibL family ribosome-associated protein;protein_id=WP_038824172.1;transl_table=11 NZ_CPUY01000024.1 RefSeq gene 19691 20245 . - . ID=gene-AD853_RS17540;Name=AD853_RS17540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS17540;old_locus_tag=ERS008462_03545 NZ_CPUY01000024.1 Protein Homology CDS 19691 20245 . - 0 ID=cds-WP_002209619.1;Parent=gene-AD853_RS17540;Dbxref=GenBank:WP_002209619.1;Name=WP_002209619.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209619.1;locus_tag=AD853_RS17540;product=MltR family transcriptional regulator;protein_id=WP_002209619.1;transl_table=11 NZ_CPUY01000024.1 RefSeq gene 20452 21615 . - . ID=gene-AD853_RS17545;Name=AD853_RS17545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS17545;old_locus_tag=ERS008462_03546 NZ_CPUY01000024.1 Protein Homology CDS 20452 21615 . - 0 ID=cds-WP_038824173.1;Parent=gene-AD853_RS17545;Dbxref=GenBank:WP_038824173.1;Name=WP_038824173.1;Ontology_term=GO:0019594,GO:0008926;gbkey=CDS;go_function=mannitol-1-phosphate 5-dehydrogenase activity|0008926||IEA;go_process=mannitol metabolic process|0019594||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002217108.1;locus_tag=AD853_RS17545;product=mannitol-1-phosphate 5-dehydrogenase;protein_id=WP_038824173.1;transl_table=11 NZ_CPUY01000024.1 RefSeq gene 21752 23683 . - . ID=gene-AD853_RS17550;Name=AD853_RS17550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS17550;old_locus_tag=ERS008462_03547 NZ_CPUY01000024.1 Protein Homology CDS 21752 23683 . - 0 ID=cds-WP_002209621.1;Parent=gene-AD853_RS17550;Dbxref=GenBank:WP_002209621.1;Name=WP_002209621.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209621.1;locus_tag=AD853_RS17550;product=PTS mannitol transporter subunit IICBA;protein_id=WP_002209621.1;transl_table=11 NZ_CPUY01000024.1 RefSeq gene 24087 24200 . - . ID=gene-AD853_RS21640;Name=AD853_RS21640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS21640 NZ_CPUY01000024.1 Protein Homology CDS 24087 24200 . - 0 ID=cds-WP_155406235.1;Parent=gene-AD853_RS21640;Dbxref=GenBank:WP_155406235.1;Name=WP_155406235.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002378759.1;locus_tag=AD853_RS21640;product=gluconate 5-dehydrogenase;protein_id=WP_155406235.1;transl_table=11 NZ_CPUY01000024.1 RefSeq gene 24333 25052 . - . ID=gene-AD853_RS17555;Name=AD853_RS17555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS17555;old_locus_tag=ERS008462_03548 NZ_CPUY01000024.1 Protein Homology CDS 24333 25052 . - 0 ID=cds-WP_012105968.1;Parent=gene-AD853_RS17555;Dbxref=GenBank:WP_012105968.1;Name=WP_012105968.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105968.1;locus_tag=AD853_RS17555;product=DUF3053 domain-containing protein;protein_id=WP_012105968.1;transl_table=11 NZ_CPUY01000024.1 RefSeq gene 25524 27593 . - . ID=gene-AD853_RS17560;Name=glyS;gbkey=Gene;gene=glyS;gene_biotype=protein_coding;locus_tag=AD853_RS17560;old_locus_tag=ERS008462_03549 NZ_CPUY01000024.1 Protein Homology CDS 25524 27593 . - 0 ID=cds-WP_002209623.1;Parent=gene-AD853_RS17560;Dbxref=GenBank:WP_002209623.1;Name=WP_002209623.1;Ontology_term=GO:0006426,GO:0000166,GO:0004820,GO:0005524,GO:0005737;gbkey=CDS;gene=glyS;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,glycine-tRNA ligase activity|0004820||IEA,ATP binding|0005524||IEA;go_process=glycyl-tRNA aminoacylation|0006426||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001291772.1;locus_tag=AD853_RS17560;product=glycine--tRNA ligase subunit beta;protein_id=WP_002209623.1;transl_table=11 NZ_CPUY01000024.1 RefSeq gene 27603 28517 . - . ID=gene-AD853_RS17565;Name=glyQ;gbkey=Gene;gene=glyQ;gene_biotype=protein_coding;locus_tag=AD853_RS17565;old_locus_tag=ERS008462_03550 NZ_CPUY01000024.1 Protein Homology CDS 27603 28517 . - 0 ID=cds-WP_002209624.1;Parent=gene-AD853_RS17565;Dbxref=GenBank:WP_002209624.1;Name=WP_002209624.1;Ontology_term=GO:0006426,GO:0000166,GO:0004820,GO:0005524,GO:0005737;gbkey=CDS;gene=glyQ;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,glycine-tRNA ligase activity|0004820||IEA,ATP binding|0005524||IEA;go_process=glycyl-tRNA aminoacylation|0006426||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005175094.1;locus_tag=AD853_RS17565;product=glycine--tRNA ligase subunit alpha;protein_id=WP_002209624.1;transl_table=11 NZ_CPUY01000024.1 RefSeq gene 28845 29417 . + . ID=gene-AD853_RS17570;Name=AD853_RS17570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS17570;old_locus_tag=ERS008462_03551 NZ_CPUY01000024.1 Protein Homology CDS 28845 29417 . + 0 ID=cds-WP_038824426.1;Parent=gene-AD853_RS17570;Dbxref=GenBank:WP_038824426.1;Name=WP_038824426.1;Ontology_term=GO:0006284,GO:0008725;gbkey=CDS;go_function=DNA-3-methyladenine glycosylase activity|0008725||IEA;go_process=base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019084177.1;locus_tag=AD853_RS17570;product=DNA-3-methyladenine glycosylase I;protein_id=WP_038824426.1;transl_table=11 NZ_CPUY01000024.1 RefSeq gene 29414 29869 . + . ID=gene-AD853_RS17575;Name=AD853_RS17575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS17575;old_locus_tag=ERS008462_03552 NZ_CPUY01000024.1 Protein Homology CDS 29414 29869 . + 0 ID=cds-WP_038824427.1;Parent=gene-AD853_RS17575;Dbxref=GenBank:WP_038824427.1;Name=WP_038824427.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209627.1;locus_tag=AD853_RS17575;product=N-acetyltransferase;protein_id=WP_038824427.1;transl_table=11 NZ_CPUY01000024.1 RefSeq gene 30227 30886 . + . ID=gene-AD853_RS17580;Name=AD853_RS17580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS17580;old_locus_tag=ERS008462_03553 NZ_CPUY01000024.1 Protein Homology CDS 30227 30886 . + 0 ID=cds-WP_050124633.1;Parent=gene-AD853_RS17580;Dbxref=GenBank:WP_050124633.1;Name=WP_050124633.1;Ontology_term=GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019081450.1;locus_tag=AD853_RS17580;product=OmpA family lipoprotein;protein_id=WP_050124633.1;transl_table=11 NZ_CPUY01000024.1 RefSeq gene 31017 31661 . - . ID=gene-AD853_RS17585;Name=AD853_RS17585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS17585;old_locus_tag=ERS008462_03554 NZ_CPUY01000024.1 Protein Homology CDS 31017 31661 . - 0 ID=cds-WP_038824429.1;Parent=gene-AD853_RS17585;Dbxref=GenBank:WP_038824429.1;Name=WP_038824429.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209629.1;locus_tag=AD853_RS17585;product=helix-turn-helix transcriptional regulator;protein_id=WP_038824429.1;transl_table=11 NZ_CPUY01000024.1 RefSeq gene 32180 33160 . + . ID=gene-AD853_RS17590;Name=ghrB;gbkey=Gene;gene=ghrB;gene_biotype=protein_coding;locus_tag=AD853_RS17590;old_locus_tag=ERS008462_03555 NZ_CPUY01000024.1 Protein Homology CDS 32180 33160 . + 0 ID=cds-WP_002209630.1;Parent=gene-AD853_RS17590;Dbxref=GenBank:WP_002209630.1;Name=WP_002209630.1;Ontology_term=GO:0016616,GO:0051287;gbkey=CDS;gene=ghrB;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012303319.1;locus_tag=AD853_RS17590;product=glyoxylate/hydroxypyruvate reductase GhrB;protein_id=WP_002209630.1;transl_table=11 NZ_CPUY01000024.1 RefSeq gene 33469 35532 . + . ID=gene-AD853_RS17595;Name=AD853_RS17595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS17595;old_locus_tag=ERS008462_03556 NZ_CPUY01000024.1 Protein Homology CDS 33469 35532 . + 0 ID=cds-WP_038824430.1;Parent=gene-AD853_RS17595;Dbxref=GenBank:WP_038824430.1;Name=WP_038824430.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105973.1;locus_tag=AD853_RS17595;product=alpha-amylase;protein_id=WP_038824430.1;transl_table=11 NZ_CPUY01000024.1 RefSeq gene 35946 36389 . + . ID=gene-AD853_RS17600;Name=AD853_RS17600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS17600;old_locus_tag=ERS008462_03557 NZ_CPUY01000024.1 Protein Homology CDS 35946 36389 . + 0 ID=cds-WP_038400718.1;Parent=gene-AD853_RS17600;Dbxref=GenBank:WP_038400718.1;Name=WP_038400718.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012303317.1;locus_tag=AD853_RS17600;product=hypothetical protein;protein_id=WP_038400718.1;transl_table=11 NZ_CPUY01000024.1 RefSeq gene 36845 38110 . + . ID=gene-AD853_RS17610;Name=AD853_RS17610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS17610;old_locus_tag=ERS008462_03559 NZ_CPUY01000024.1 Protein Homology CDS 36845 38110 . + 0 ID=cds-WP_038401683.1;Parent=gene-AD853_RS17610;Dbxref=GenBank:WP_038401683.1;Name=WP_038401683.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002228155.1;locus_tag=AD853_RS17610;product=valine--pyruvate transaminase;protein_id=WP_038401683.1;transl_table=11 NZ_CPUY01000024.1 RefSeq gene 38223 39881 . - . ID=gene-AD853_RS17615;Name=AD853_RS17615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS17615;old_locus_tag=ERS008462_03560 NZ_CPUY01000024.1 Protein Homology CDS 38223 39881 . - 0 ID=cds-WP_038824431.1;Parent=gene-AD853_RS17615;Dbxref=GenBank:WP_038824431.1;Name=WP_038824431.1;Ontology_term=GO:0006813,GO:0008324;gbkey=CDS;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005186793.1;locus_tag=AD853_RS17615;product=putative transporter;protein_id=WP_038824431.1;transl_table=11 NZ_CPUY01000024.1 RefSeq gene 40254 40718 . - . ID=gene-AD853_RS17620;Name=ibpB;gbkey=Gene;gene=ibpB;gene_biotype=protein_coding;locus_tag=AD853_RS17620;old_locus_tag=ERS008462_03561 NZ_CPUY01000024.1 Protein Homology CDS 40254 40718 . - 0 ID=cds-WP_002209635.1;Parent=gene-AD853_RS17620;Dbxref=GenBank:WP_002209635.1;Name=WP_002209635.1;Ontology_term=GO:0006950,GO:0051082;gbkey=CDS;gene=ibpB;go_function=unfolded protein binding|0051082||IEA;go_process=response to stress|0006950||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209635.1;locus_tag=AD853_RS17620;product=small heat shock chaperone IbpB;protein_id=WP_002209635.1;transl_table=11 NZ_CPUY01000024.1 RefSeq gene 40999 41412 . - . ID=gene-AD853_RS17625;Name=ibpA;gbkey=Gene;gene=ibpA;gene_biotype=protein_coding;locus_tag=AD853_RS17625;old_locus_tag=ERS008462_03562 NZ_CPUY01000024.1 Protein Homology CDS 40999 41412 . - 0 ID=cds-WP_038824432.1;Parent=gene-AD853_RS17625;Dbxref=GenBank:WP_038824432.1;Name=WP_038824432.1;Ontology_term=GO:0006950,GO:0051082;gbkey=CDS;gene=ibpA;go_function=unfolded protein binding|0051082||IEA;go_process=response to stress|0006950||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209636.1;locus_tag=AD853_RS17625;product=small heat shock chaperone IbpA;protein_id=WP_038824432.1;transl_table=11 NZ_CPUY01000024.1 RefSeq gene 41780 42118 . + . ID=gene-AD853_RS17630;Name=AD853_RS17630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS17630;old_locus_tag=ERS008462_03563 NZ_CPUY01000024.1 Protein Homology CDS 41780 42118 . + 0 ID=cds-WP_038824433.1;Parent=gene-AD853_RS17630;Dbxref=GenBank:WP_038824433.1;Name=WP_038824433.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209637.1;locus_tag=AD853_RS17630;product=YceK/YidQ family lipoprotein;protein_id=WP_038824433.1;transl_table=11 NZ_CPUY01000024.1 RefSeq gene 42158 43459 . - . ID=gene-AD853_RS17635;Name=AD853_RS17635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS17635;old_locus_tag=ERS008462_03564 NZ_CPUY01000024.1 Protein Homology CDS 42158 43459 . - 0 ID=cds-WP_038824434.1;Parent=gene-AD853_RS17635;Dbxref=GenBank:WP_038824434.1;Name=WP_038824434.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011193329.1;locus_tag=AD853_RS17635;product=DUF3748 domain-containing protein;protein_id=WP_038824434.1;transl_table=11 NZ_CPUY01000024.1 RefSeq gene 43667 44629 . + . ID=gene-AD853_RS17640;Name=AD853_RS17640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS17640;old_locus_tag=ERS008462_03565 NZ_CPUY01000024.1 Protein Homology CDS 43667 44629 . + 0 ID=cds-WP_050124634.1;Parent=gene-AD853_RS17640;Dbxref=GenBank:WP_050124634.1;Name=WP_050124634.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209638.1;locus_tag=AD853_RS17640;product=threonine/serine dehydratase;protein_id=WP_050124634.1;transl_table=11 NZ_CPUY01000024.1 RefSeq gene 44623 45576 . + . ID=gene-AD853_RS17645;Name=AD853_RS17645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS17645;old_locus_tag=ERS008462_03566 NZ_CPUY01000024.1 Protein Homology CDS 44623 45576 . + 0 ID=cds-WP_011193327.1;Parent=gene-AD853_RS17645;Dbxref=GenBank:WP_011193327.1;Name=WP_011193327.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011193327.1;locus_tag=AD853_RS17645;product=ornithine cyclodeaminase family protein;protein_id=WP_011193327.1;transl_table=11 ##sequence-region NZ_CPUY01000025.1 1 44171 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=633 NZ_CPUY01000025.1 RefSeq region 1 44171 . + . ID=NZ_CPUY01000025.1:1..44171;Dbxref=taxon:633;collection-date=1900/2008;country=South Africa;gbkey=Src;genome=genomic;isolation-source=not known;mol_type=genomic DNA;nat-host=pig;serovar=O:3;strain=IP32544 NZ_CPUY01000025.1 RefSeq gene 1 316 . - . ID=gene-AD853_RS17650;Name=AD853_RS17650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS17650;partial=true;start_range=.,1 NZ_CPUY01000025.1 Protein Homology CDS 1 316 . - 0 ID=cds-WP_050124635.1;Parent=gene-AD853_RS17650;Dbxref=GenBank:WP_050124635.1;Name=WP_050124635.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228147.1;locus_tag=AD853_RS17650;partial=true;product=GNAT family acetyltransferase;protein_id=WP_050124635.1;start_range=.,1;transl_table=11 NZ_CPUY01000025.1 RefSeq gene 598 1527 . + . ID=gene-AD853_RS17655;Name=hemF;gbkey=Gene;gene=hemF;gene_biotype=protein_coding;locus_tag=AD853_RS17655;old_locus_tag=ERS008462_03567 NZ_CPUY01000025.1 Protein Homology CDS 598 1527 . + 0 ID=cds-WP_002208526.1;Parent=gene-AD853_RS17655;Dbxref=GenBank:WP_002208526.1;Name=WP_002208526.1;Ontology_term=GO:0006779,GO:0004109;gbkey=CDS;gene=hemF;go_function=coproporphyrinogen oxidase activity|0004109||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012104841.1;locus_tag=AD853_RS17655;product=oxygen-dependent coproporphyrinogen oxidase;protein_id=WP_002208526.1;transl_table=11 NZ_CPUY01000025.1 RefSeq gene 1527 2021 . + . ID=gene-AD853_RS17660;Name=AD853_RS17660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS17660;old_locus_tag=ERS008462_03568 NZ_CPUY01000025.1 Protein Homology CDS 1527 2021 . + 0 ID=cds-WP_050124636.1;Parent=gene-AD853_RS17660;Dbxref=GenBank:WP_050124636.1;Name=WP_050124636.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208527.1;locus_tag=AD853_RS17660;product=YaiI/YqxD family protein;protein_id=WP_050124636.1;transl_table=11 NZ_CPUY01000025.1 RefSeq gene 2062 4341 . - . ID=gene-AD853_RS17665;Name=maeB;gbkey=Gene;gene=maeB;gene_biotype=protein_coding;locus_tag=AD853_RS17665;old_locus_tag=ERS008462_03569 NZ_CPUY01000025.1 Protein Homology CDS 2062 4341 . - 0 ID=cds-WP_011192757.1;Parent=gene-AD853_RS17665;Dbxref=GenBank:WP_011192757.1;Name=WP_011192757.1;gbkey=CDS;gene=maeB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012229805.1;locus_tag=AD853_RS17665;product=NADP-dependent oxaloacetate-decarboxylating malate dehydrogenase;protein_id=WP_011192757.1;transl_table=11 NZ_CPUY01000025.1 RefSeq gene 4660 5256 . - . ID=gene-AD853_RS17670;Name=nudK;gbkey=Gene;gene=nudK;gene_biotype=protein_coding;locus_tag=AD853_RS17670;old_locus_tag=ERS008462_03570 NZ_CPUY01000025.1 Protein Homology CDS 4660 5256 . - 0 ID=cds-WP_038823938.1;Parent=gene-AD853_RS17670;Dbxref=GenBank:WP_038823938.1;Name=WP_038823938.1;Ontology_term=GO:0016818,GO:0046872;gbkey=CDS;gene=nudK;go_function=hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208529.1;locus_tag=AD853_RS17670;product=GDP-mannose pyrophosphatase NudK;protein_id=WP_038823938.1;transl_table=11 NZ_CPUY01000025.1 RefSeq gene 5449 6051 . - . ID=gene-AD853_RS17675;Name=napC;gbkey=Gene;gene=napC;gene_biotype=protein_coding;locus_tag=AD853_RS17675;old_locus_tag=ERS008462_03571 NZ_CPUY01000025.1 Protein Homology CDS 5449 6051 . - 0 ID=cds-WP_002208531.1;Parent=gene-AD853_RS17675;Dbxref=GenBank:WP_002208531.1;Name=WP_002208531.1;gbkey=CDS;gene=napC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208531.1;locus_tag=AD853_RS17675;product=cytochrome c-type protein NapC;protein_id=WP_002208531.1;transl_table=11 NZ_CPUY01000025.1 RefSeq gene 6076 6531 . - . ID=gene-AD853_RS17680;Name=napB;gbkey=Gene;gene=napB;gene_biotype=protein_coding;locus_tag=AD853_RS17680;old_locus_tag=ERS008462_03572 NZ_CPUY01000025.1 Protein Homology CDS 6076 6531 . - 0 ID=cds-WP_196299232.1;Parent=gene-AD853_RS17680;Dbxref=GenBank:WP_196299232.1;Name=WP_196299232.1;gbkey=CDS;gene=napB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002214527.1;locus_tag=AD853_RS17680;product=nitrate reductase cytochrome c-type subunit;protein_id=WP_196299232.1;transl_table=11 NZ_CPUY01000025.1 RefSeq gene 6626 9118 . - . ID=gene-AD853_RS17685;Name=napA;gbkey=Gene;gene=napA;gene_biotype=protein_coding;locus_tag=AD853_RS17685;old_locus_tag=ERS008462_03573 NZ_CPUY01000025.1 Protein Homology CDS 6626 9118 . - 0 ID=cds-WP_011171900.1;Parent=gene-AD853_RS17685;Dbxref=GenBank:WP_011171900.1;Name=WP_011171900.1;Ontology_term=GO:0008940,GO:0030151,GO:0043546,GO:0051539;gbkey=CDS;gene=napA;go_function=nitrate reductase activity|0008940||IEA,molybdenum ion binding|0030151||IEA,molybdopterin cofactor binding|0043546||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016674026.1;locus_tag=AD853_RS17685;product=nitrate reductase catalytic subunit NapA;protein_id=WP_011171900.1;transl_table=11 NZ_CPUY01000025.1 RefSeq gene 9115 9381 . - . ID=gene-AD853_RS17690;Name=napD;gbkey=Gene;gene=napD;gene_biotype=protein_coding;locus_tag=AD853_RS17690;old_locus_tag=ERS008462_03574 NZ_CPUY01000025.1 Protein Homology CDS 9115 9381 . - 0 ID=cds-WP_002208535.1;Parent=gene-AD853_RS17690;Dbxref=GenBank:WP_002208535.1;Name=WP_002208535.1;gbkey=CDS;gene=napD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011906320.1;locus_tag=AD853_RS17690;product=chaperone NapD;protein_id=WP_002208535.1;transl_table=11 NZ_CPUY01000025.1 RefSeq gene 9371 9874 . - . ID=gene-AD853_RS17695;Name=napF;gbkey=Gene;gene=napF;gene_biotype=protein_coding;locus_tag=AD853_RS17695;old_locus_tag=ERS008462_03575 NZ_CPUY01000025.1 Protein Homology CDS 9371 9874 . - 0 ID=cds-WP_002231048.1;Parent=gene-AD853_RS17695;Dbxref=GenBank:WP_002231048.1;Name=WP_002231048.1;Ontology_term=GO:0051539;gbkey=CDS;gene=napF;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208536.1;locus_tag=AD853_RS17695;product=ferredoxin-type protein NapF;protein_id=WP_002231048.1;transl_table=11 NZ_CPUY01000025.1 RefSeq gene 10707 11336 . + . ID=gene-AD853_RS17700;Name=AD853_RS17700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS17700;old_locus_tag=ERS008462_03576 NZ_CPUY01000025.1 Protein Homology CDS 10707 11336 . + 0 ID=cds-WP_002208537.1;Parent=gene-AD853_RS17700;Dbxref=GenBank:WP_002208537.1;Name=WP_002208537.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004878032.1;locus_tag=AD853_RS17700;product=response regulator;protein_id=WP_002208537.1;transl_table=11 NZ_CPUY01000025.1 RefSeq gene 11349 11627 . - . ID=gene-AD853_RS17705;Name=AD853_RS17705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS17705;old_locus_tag=ERS008462_03577 NZ_CPUY01000025.1 Protein Homology CDS 11349 11627 . - 0 ID=cds-WP_002208538.1;Parent=gene-AD853_RS17705;Dbxref=GenBank:WP_002208538.1;Name=WP_002208538.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208538.1;locus_tag=AD853_RS17705;product=winged helix-turn-helix domain-containing protein;protein_id=WP_002208538.1;transl_table=11 NZ_CPUY01000025.1 RefSeq gene 12042 15173 . + . ID=gene-AD853_RS17710;Name=acrD;gbkey=Gene;gene=acrD;gene_biotype=protein_coding;locus_tag=AD853_RS17710;old_locus_tag=ERS008462_03578 NZ_CPUY01000025.1 Protein Homology CDS 12042 15173 . + 0 ID=cds-WP_038825692.1;Parent=gene-AD853_RS17710;Dbxref=GenBank:WP_038825692.1;Name=WP_038825692.1;Ontology_term=GO:0042908,GO:0015562;gbkey=CDS;gene=acrD;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=xenobiotic transport|0042908||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208539.1;locus_tag=AD853_RS17710;product=multidrug efflux RND transporter permease AcrD;protein_id=WP_038825692.1;transl_table=11 NZ_CPUY01000025.1 RefSeq gene 15404 15988 . + . ID=gene-AD853_RS17715;Name=AD853_RS17715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS17715;old_locus_tag=ERS008462_03579 NZ_CPUY01000025.1 Protein Homology CDS 15404 15988 . + 0 ID=cds-WP_002208540.1;Parent=gene-AD853_RS17715;Dbxref=GenBank:WP_002208540.1;Name=WP_002208540.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208540.1;locus_tag=AD853_RS17715;product=hypothetical protein;protein_id=WP_002208540.1;transl_table=11 NZ_CPUY01000025.1 RefSeq gene 16277 16825 . + . ID=gene-AD853_RS17720;Name=AD853_RS17720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS17720;old_locus_tag=ERS008462_03580 NZ_CPUY01000025.1 Protein Homology CDS 16277 16825 . + 0 ID=cds-WP_002208541.1;Parent=gene-AD853_RS17720;Dbxref=GenBank:WP_002208541.1;Name=WP_002208541.1;Ontology_term=GO:0016787,GO:0046872,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208541.1;locus_tag=AD853_RS17720;product=metal-dependent hydrolase;protein_id=WP_002208541.1;transl_table=11 NZ_CPUY01000025.1 RefSeq gene 17572 18747 . - . ID=gene-AD853_RS17725;Name=AD853_RS17725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS17725;old_locus_tag=ERS008462_03581 NZ_CPUY01000025.1 Protein Homology CDS 17572 18747 . - 0 ID=cds-WP_011192759.1;Parent=gene-AD853_RS17725;Dbxref=GenBank:WP_011192759.1;Name=WP_011192759.1;Ontology_term=GO:0018209,GO:0046500,GO:0016491,GO:0051539;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=peptidyl-serine modification|0018209||IEA,S-adenosylmethionine metabolic process|0046500||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208542.1;locus_tag=AD853_RS17725;product=anaerobic sulfatase maturase;protein_id=WP_011192759.1;transl_table=11 NZ_CPUY01000025.1 RefSeq gene 18805 20475 . - . ID=gene-AD853_RS17730;Name=AD853_RS17730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS17730;old_locus_tag=ERS008462_03582 NZ_CPUY01000025.1 Protein Homology CDS 18805 20475 . - 0 ID=cds-WP_002378486.1;Parent=gene-AD853_RS17730;Dbxref=GenBank:WP_002378486.1;Name=WP_002378486.1;Ontology_term=GO:0008484;gbkey=CDS;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002378486.1;locus_tag=AD853_RS17730;product=sulfatase-like hydrolase/transferase;protein_id=WP_002378486.1;transl_table=11 NZ_CPUY01000025.1 RefSeq gene 20736 20942 . - . ID=gene-AD853_RS21050;Name=AD853_RS21050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS21050 NZ_CPUY01000025.1 Protein Homology CDS 20736 20942 . - 0 ID=cds-WP_002214539.1;Parent=gene-AD853_RS21050;Dbxref=GenBank:WP_002214539.1;Name=WP_002214539.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002214539.1;locus_tag=AD853_RS21050;product=hypothetical protein;protein_id=WP_002214539.1;transl_table=11 NZ_CPUY01000025.1 RefSeq gene 20956 22026 . - . ID=gene-AD853_RS17735;Name=AD853_RS17735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS17735;old_locus_tag=ERS008462_03583 NZ_CPUY01000025.1 Protein Homology CDS 20956 22026 . - 0 ID=cds-WP_038824551.1;Parent=gene-AD853_RS17735;Dbxref=GenBank:WP_038824551.1;Name=WP_038824551.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012229891.1;locus_tag=AD853_RS17735;product=ABC transporter ATP-binding protein;protein_id=WP_038824551.1;transl_table=11 NZ_CPUY01000025.1 RefSeq gene 22019 23788 . - . ID=gene-AD853_RS17740;Name=AD853_RS17740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS17740;old_locus_tag=ERS008462_03584 NZ_CPUY01000025.1 Protein Homology CDS 22019 23788 . - 0 ID=cds-WP_002231049.1;Parent=gene-AD853_RS17740;Dbxref=GenBank:WP_002231049.1;Name=WP_002231049.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002231049.1;locus_tag=AD853_RS17740;product=ABC transporter permease;protein_id=WP_002231049.1;transl_table=11 NZ_CPUY01000025.1 RefSeq gene 23883 24971 . - . ID=gene-AD853_RS17745;Name=AD853_RS17745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS17745;old_locus_tag=ERS008462_03585 NZ_CPUY01000025.1 Protein Homology CDS 23883 24971 . - 0 ID=cds-WP_011192761.1;Parent=gene-AD853_RS17745;Dbxref=GenBank:WP_011192761.1;Name=WP_011192761.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208546.1;locus_tag=AD853_RS17745;product=ABC transporter substrate-binding protein;protein_id=WP_011192761.1;transl_table=11 NZ_CPUY01000025.1 RefSeq gene 25282 25755 . + . ID=gene-AD853_RS17750;Name=AD853_RS17750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS17750;old_locus_tag=ERS008462_03586 NZ_CPUY01000025.1 Protein Homology CDS 25282 25755 . + 0 ID=cds-WP_002208547.1;Parent=gene-AD853_RS17750;Dbxref=GenBank:WP_002208547.1;Name=WP_002208547.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208547.1;locus_tag=AD853_RS17750;product=tetratricopeptide repeat protein;protein_id=WP_002208547.1;transl_table=11 NZ_CPUY01000025.1 RefSeq gene 25915 26313 . + . ID=gene-AD853_RS17755;Name=AD853_RS17755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS17755;old_locus_tag=ERS008462_03587 NZ_CPUY01000025.1 Protein Homology CDS 25915 26313 . + 0 ID=cds-WP_002208548.1;Parent=gene-AD853_RS17755;Dbxref=GenBank:WP_002208548.1;Name=WP_002208548.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208548.1;locus_tag=AD853_RS17755;product=ArsC family reductase;protein_id=WP_002208548.1;transl_table=11 NZ_CPUY01000025.1 RefSeq gene 26315 27442 . + . ID=gene-AD853_RS17760;Name=dapE;gbkey=Gene;gene=dapE;gene_biotype=protein_coding;locus_tag=AD853_RS17760;old_locus_tag=ERS008462_03588 NZ_CPUY01000025.1 Protein Homology CDS 26315 27442 . + 0 ID=cds-WP_002208549.1;Parent=gene-AD853_RS17760;Dbxref=GenBank:WP_002208549.1;Name=WP_002208549.1;Ontology_term=GO:0009089,GO:0009014;gbkey=CDS;gene=dapE;go_function=succinyl-diaminopimelate desuccinylase activity|0009014||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019083676.1;locus_tag=AD853_RS17760;product=succinyl-diaminopimelate desuccinylase;protein_id=WP_002208549.1;transl_table=11 NZ_CPUY01000025.1 RefSeq gene 27439 28116 . + . ID=gene-AD853_RS17765;Name=AD853_RS17765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS17765;old_locus_tag=ERS008462_03589 NZ_CPUY01000025.1 Protein Homology CDS 27439 28116 . + 0 ID=cds-WP_002208550.1;Parent=gene-AD853_RS17765;Dbxref=GenBank:WP_002208550.1;Name=WP_002208550.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208550.1;locus_tag=AD853_RS17765;product=M15 family metallopeptidase;protein_id=WP_002208550.1;transl_table=11 NZ_CPUY01000025.1 RefSeq gene 28184 28378 . + . ID=gene-AD853_RS17770;Name=AD853_RS17770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS17770;old_locus_tag=ERS008462_03590 NZ_CPUY01000025.1 Protein Homology CDS 28184 28378 . + 0 ID=cds-WP_002208551.1;Parent=gene-AD853_RS17770;Dbxref=GenBank:WP_002208551.1;Name=WP_002208551.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004876838.1;locus_tag=AD853_RS17770;product=YpfN family protein;protein_id=WP_002208551.1;transl_table=11 NZ_CPUY01000025.1 RefSeq pseudogene 28513 28629 . - . ID=gene-AD853_RS22335;Name=AD853_RS22335;end_range=28629,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD853_RS22335;partial=true;pseudo=true;start_range=.,28513 NZ_CPUY01000025.1 Protein Homology CDS 28513 28629 . - 0 ID=cds-AD853_RS22335;Parent=gene-AD853_RS22335;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=28629,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001525782.1;locus_tag=AD853_RS22335;partial=true;product=sugar kinase;pseudo=true;start_range=.,28513;transl_table=11 NZ_CPUY01000025.1 RefSeq pseudogene 28583 30683 . - . ID=gene-AD853_RS17775;Name=AD853_RS17775;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD853_RS17775;old_locus_tag=ERS008462_03591;pseudo=true NZ_CPUY01000025.1 Protein Homology CDS 28583 30683 . - 0 ID=cds-AD853_RS17775;Parent=gene-AD853_RS17775;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208552.1;locus_tag=AD853_RS17775;product=tRNA(Met) cytidine acetyltransferase TmcA;pseudo=true;transl_table=11 NZ_CPUY01000025.1 RefSeq gene 30685 31137 . - . ID=gene-AD853_RS17780;Name=AD853_RS17780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS17780;old_locus_tag=ERS008462_03592 NZ_CPUY01000025.1 Protein Homology CDS 30685 31137 . - 0 ID=cds-WP_002208553.1;Parent=gene-AD853_RS17780;Dbxref=GenBank:WP_002208553.1;Name=WP_002208553.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208553.1;locus_tag=AD853_RS17780;product=DUF441 domain-containing protein;protein_id=WP_002208553.1;transl_table=11 NZ_CPUY01000025.1 RefSeq pseudogene 31231 32098 . - . ID=gene-AD853_RS17785;Name=ypfJ;gbkey=Gene;gene=ypfJ;gene_biotype=pseudogene;locus_tag=AD853_RS17785;old_locus_tag=ERS008462_03593;pseudo=true NZ_CPUY01000025.1 Protein Homology CDS 31231 32098 . - 0 ID=cds-AD853_RS17785;Parent=gene-AD853_RS17785;Note=frameshifted;gbkey=CDS;gene=ypfJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013814056.1;locus_tag=AD853_RS17785;product=KPN_02809 family neutral zinc metallopeptidase;pseudo=true;transl_table=11 NZ_CPUY01000025.1 RefSeq gene 32318 33031 . - . ID=gene-AD853_RS17790;Name=purC;gbkey=Gene;gene=purC;gene_biotype=protein_coding;locus_tag=AD853_RS17790;old_locus_tag=ERS008462_03594 NZ_CPUY01000025.1 Protein Homology CDS 32318 33031 . - 0 ID=cds-WP_002208555.1;Parent=gene-AD853_RS17790;Dbxref=GenBank:WP_002208555.1;Name=WP_002208555.1;Ontology_term=GO:0006164,GO:0004639;gbkey=CDS;gene=purC;go_function=phosphoribosylaminoimidazolesuccinocarboxamide synthase activity|0004639||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017458944.1;locus_tag=AD853_RS17790;product=phosphoribosylaminoimidazolesuccinocarboxamide synthase;protein_id=WP_002208555.1;transl_table=11 NZ_CPUY01000025.1 RefSeq gene 33102 34160 . - . ID=gene-AD853_RS17795;Name=bamC;gbkey=Gene;gene=bamC;gene_biotype=protein_coding;locus_tag=AD853_RS17795;old_locus_tag=ERS008462_03595 NZ_CPUY01000025.1 Protein Homology CDS 33102 34160 . - 0 ID=cds-WP_038824554.1;Parent=gene-AD853_RS17795;Dbxref=GenBank:WP_038824554.1;Name=WP_038824554.1;gbkey=CDS;gene=bamC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012303873.1;locus_tag=AD853_RS17795;product=outer membrane protein assembly factor BamC;protein_id=WP_038824554.1;transl_table=11 NZ_CPUY01000025.1 RefSeq gene 34178 35059 . - . ID=gene-AD853_RS17800;Name=dapA;gbkey=Gene;gene=dapA;gene_biotype=protein_coding;locus_tag=AD853_RS17800;old_locus_tag=ERS008462_03596 NZ_CPUY01000025.1 Protein Homology CDS 34178 35059 . - 0 ID=cds-WP_002227834.1;Parent=gene-AD853_RS17800;Dbxref=GenBank:WP_002227834.1;Name=WP_002227834.1;Ontology_term=GO:0009089,GO:0008840;gbkey=CDS;gene=dapA;go_function=4-hydroxy-tetrahydrodipicolinate synthase activity|0008840||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_032466692.1;locus_tag=AD853_RS17800;product=4-hydroxy-tetrahydrodipicolinate synthase;protein_id=WP_002227834.1;transl_table=11 NZ_CPUY01000025.1 RefSeq gene 35224 35793 . + . ID=gene-AD853_RS17805;Name=AD853_RS17805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS17805;old_locus_tag=ERS008462_03597 NZ_CPUY01000025.1 Protein Homology CDS 35224 35793 . + 0 ID=cds-WP_002227068.1;Parent=gene-AD853_RS17805;Dbxref=GenBank:WP_002227068.1;Name=WP_002227068.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002227068.1;locus_tag=AD853_RS17805;product=glycine cleavage system transcriptional repressor;protein_id=WP_002227068.1;transl_table=11 NZ_CPUY01000025.1 RefSeq gene 35796 36266 . + . ID=gene-AD853_RS17810;Name=bcp;gbkey=Gene;gene=bcp;gene_biotype=protein_coding;locus_tag=AD853_RS17810;old_locus_tag=ERS008462_03598 NZ_CPUY01000025.1 Protein Homology CDS 35796 36266 . + 0 ID=cds-WP_011192766.1;Parent=gene-AD853_RS17810;Dbxref=GenBank:WP_011192766.1;Name=WP_011192766.1;Ontology_term=GO:0016209,GO:0016491;gbkey=CDS;gene=bcp;go_function=antioxidant activity|0016209||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311369.1;locus_tag=AD853_RS17810;product=thioredoxin-dependent thiol peroxidase;protein_id=WP_011192766.1;transl_table=11 NZ_CPUY01000025.1 RefSeq gene 36510 36929 . - . ID=gene-AD853_RS22540;Name=AD853_RS22540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS22540;old_locus_tag=ERS008462_03599 NZ_CPUY01000025.1 Protein Homology CDS 36510 36929 . - 0 ID=cds-WP_025384480.1;Parent=gene-AD853_RS22540;Dbxref=GenBank:WP_025384480.1;Name=WP_025384480.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002217563.1;locus_tag=AD853_RS22540;product=hypothetical protein;protein_id=WP_025384480.1;transl_table=11 NZ_CPUY01000025.1 RefSeq gene 36933 37628 . - . ID=gene-AD853_RS17820;Name=AD853_RS17820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS17820;old_locus_tag=ERS008462_03600 NZ_CPUY01000025.1 Protein Homology CDS 36933 37628 . - 0 ID=cds-WP_012303872.1;Parent=gene-AD853_RS17820;Dbxref=GenBank:WP_012303872.1;Name=WP_012303872.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208561.1;locus_tag=AD853_RS17820;product=hypothetical protein;protein_id=WP_012303872.1;transl_table=11 NZ_CPUY01000025.1 RefSeq gene 38228 39292 . - . ID=gene-AD853_RS17830;Name=AD853_RS17830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS17830;old_locus_tag=ERS008462_03601 NZ_CPUY01000025.1 Protein Homology CDS 38228 39292 . - 0 ID=cds-WP_002208563.1;Parent=gene-AD853_RS17830;Dbxref=GenBank:WP_002208563.1;Name=WP_002208563.1;Ontology_term=GO:0055085,GO:1905887,GO:0015562;gbkey=CDS;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=transmembrane transport|0055085||IEA,autoinducer AI-2 transmembrane transport|1905887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005172372.1;locus_tag=AD853_RS17830;product=AI-2E family transporter;protein_id=WP_002208563.1;transl_table=11 NZ_CPUY01000025.1 RefSeq gene 39623 41107 . + . ID=gene-AD853_RS17835;Name=bepA;gbkey=Gene;gene=bepA;gene_biotype=protein_coding;locus_tag=AD853_RS17835;old_locus_tag=ERS008462_03602 NZ_CPUY01000025.1 Protein Homology CDS 39623 41107 . + 0 ID=cds-WP_038824556.1;Parent=gene-AD853_RS17835;Dbxref=GenBank:WP_038824556.1;Name=WP_038824556.1;gbkey=CDS;gene=bepA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192768.1;locus_tag=AD853_RS17835;product=beta-barrel assembly-enhancing protease;protein_id=WP_038824556.1;transl_table=11 NZ_CPUY01000025.1 RefSeq gene 41214 41570 . + . ID=gene-AD853_RS17840;Name=arsC;gbkey=Gene;gene=arsC;gene_biotype=protein_coding;locus_tag=AD853_RS17840;old_locus_tag=ERS008462_03603 NZ_CPUY01000025.1 Protein Homology CDS 41214 41570 . + 0 ID=cds-WP_002208565.1;Parent=gene-AD853_RS17840;Dbxref=GenBank:WP_002208565.1;Name=WP_002208565.1;Note=This arsenate reductase requires both glutathione and glutaredoxin to convert arsenate to arsenite%2C after which the efflux transporter formed by ArsA and ArsB can extrude the arsenite from the cell%2C providing resistance.;Ontology_term=GO:0046685,GO:0008794;gbkey=CDS;gene=arsC;go_function=arsenate reductase (glutaredoxin) activity|0008794||IEA;go_process=response to arsenic-containing substance|0046685||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004391285.1;locus_tag=AD853_RS17840;product=arsenate reductase (glutaredoxin);protein_id=WP_002208565.1;transl_table=11 NZ_CPUY01000025.1 RefSeq gene 41783 42490 . - . ID=gene-AD853_RS17845;Name=hda;gbkey=Gene;gene=hda;gene_biotype=protein_coding;locus_tag=AD853_RS17845;old_locus_tag=ERS008462_03604 NZ_CPUY01000025.1 Protein Homology CDS 41783 42490 . - 0 ID=cds-WP_002228401.1;Parent=gene-AD853_RS17845;Dbxref=GenBank:WP_002228401.1;Name=WP_002228401.1;gbkey=CDS;gene=hda;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002228401.1;locus_tag=AD853_RS17845;product=DnaA inactivator Hda;protein_id=WP_002228401.1;transl_table=11 NZ_CPUY01000025.1 RefSeq gene 42749 44035 . - . ID=gene-AD853_RS17850;Name=uraA;gbkey=Gene;gene=uraA;gene_biotype=protein_coding;locus_tag=AD853_RS17850;old_locus_tag=ERS008462_03605 NZ_CPUY01000025.1 Protein Homology CDS 42749 44035 . - 0 ID=cds-WP_038824557.1;Parent=gene-AD853_RS17850;Dbxref=GenBank:WP_038824557.1;Name=WP_038824557.1;Ontology_term=GO:0022857;gbkey=CDS;gene=uraA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012413843.1;locus_tag=AD853_RS17850;product=uracil permease;protein_id=WP_038824557.1;transl_table=11 ##sequence-region NZ_CPUY01000026.1 1 40191 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=633 NZ_CPUY01000026.1 RefSeq region 1 40191 . + . ID=NZ_CPUY01000026.1:1..40191;Dbxref=taxon:633;collection-date=1900/2008;country=South Africa;gbkey=Src;genome=genomic;isolation-source=not known;mol_type=genomic DNA;nat-host=pig;serovar=O:3;strain=IP32544 NZ_CPUY01000026.1 RefSeq pseudogene 33 611 . - . ID=gene-AD853_RS17855;Name=AD853_RS17855;end_range=611,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD853_RS17855;old_locus_tag=ERS008462_03606;partial=true;pseudo=true NZ_CPUY01000026.1 Protein Homology CDS 33 611 . - 0 ID=cds-AD853_RS17855;Parent=gene-AD853_RS17855;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=611,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611505.1;locus_tag=AD853_RS17855;partial=true;product=IS3-like element ISYps8 family transposase;pseudo=true;transl_table=11 NZ_CPUY01000026.1 RefSeq pseudogene 611 847 . + . ID=gene-AD853_RS17860;Name=AD853_RS17860;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD853_RS17860;partial=true;pseudo=true;start_range=.,611 NZ_CPUY01000026.1 Protein Homology CDS 611 847 . + 0 ID=cds-AD853_RS17860;Parent=gene-AD853_RS17860;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000355324.1;locus_tag=AD853_RS17860;partial=true;product=transposase domain-containing protein;pseudo=true;start_range=.,611;transl_table=11 NZ_CPUY01000026.1 RefSeq gene 1130 2536 . + . ID=gene-AD853_RS17865;Name=yopH;gbkey=Gene;gene=yopH;gene_biotype=protein_coding;locus_tag=AD853_RS17865;old_locus_tag=ERS008462_03607 NZ_CPUY01000026.1 Protein Homology CDS 1130 2536 . + 0 ID=cds-WP_002213278.1;Parent=gene-AD853_RS17865;Dbxref=GenBank:WP_002213278.1;Name=WP_002213278.1;gbkey=CDS;gene=yopH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002213278.1;locus_tag=AD853_RS17865;product=T3SS effector protein-tyrosine-phosphatase YopH;protein_id=WP_002213278.1;transl_table=11 NZ_CPUY01000026.1 RefSeq pseudogene 2757 3029 . - . ID=gene-AD853_RS21055;Name=AD853_RS21055;end_range=3029,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD853_RS21055;partial=true;pseudo=true NZ_CPUY01000026.1 Protein Homology CDS 2757 3029 . - 0 ID=cds-AD853_RS21055;Parent=gene-AD853_RS21055;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=3029,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343613.1;locus_tag=AD853_RS21055;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_CPUY01000026.1 RefSeq pseudogene 3048 4065 . - . ID=gene-AD853_RS21360;Name=AD853_RS21360;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD853_RS21360;pseudo=true NZ_CPUY01000026.1 Protein Homology CDS 3048 4065 . - 0 ID=cds-AD853_RS21360;Parent=gene-AD853_RS21360;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611456.1;locus_tag=AD853_RS21360;product=IS3 family transposase;pseudo=true;transl_table=11 NZ_CPUY01000026.1 RefSeq gene 4613 4960 . - . ID=gene-AD853_RS17885;Name=lcrQ;gbkey=Gene;gene=lcrQ;gene_biotype=protein_coding;locus_tag=AD853_RS17885;old_locus_tag=ERS008462_03609 NZ_CPUY01000026.1 Protein Homology CDS 4613 4960 . - 0 ID=cds-WP_002212907.1;Parent=gene-AD853_RS17885;Dbxref=GenBank:WP_002212907.1;Name=WP_002212907.1;Ontology_term=GO:0006470,GO:0004725;gbkey=CDS;gene=lcrQ;go_function=protein tyrosine phosphatase activity|0004725||IEA;go_process=protein dephosphorylation|0006470||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212907.1;locus_tag=AD853_RS17885;product=type III secretion system exported negative regulator LcrQ/YscM1;protein_id=WP_002212907.1;transl_table=11 NZ_CPUY01000026.1 RefSeq gene 5185 5850 . - . ID=gene-AD853_RS17890;Name=yscL;gbkey=Gene;gene=yscL;gene_biotype=protein_coding;locus_tag=AD853_RS17890;old_locus_tag=ERS008462_03610 NZ_CPUY01000026.1 Protein Homology CDS 5185 5850 . - 0 ID=cds-WP_072080859.1;Parent=gene-AD853_RS17890;Dbxref=GenBank:WP_072080859.1;Name=WP_072080859.1;gbkey=CDS;gene=yscL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010981371.1;locus_tag=AD853_RS17890;product=SctL family type III secretion system stator protein YscL;protein_id=WP_072080859.1;transl_table=11 NZ_CPUY01000026.1 RefSeq gene 5796 6425 . - . ID=gene-AD853_RS17895;Name=yscK;gbkey=Gene;gene=yscK;gene_biotype=protein_coding;gene_synonym=sctK;locus_tag=AD853_RS17895;old_locus_tag=ERS008462_03611 NZ_CPUY01000026.1 Protein Homology CDS 5796 6425 . - 0 ID=cds-WP_002361471.1;Parent=gene-AD853_RS17895;Dbxref=GenBank:WP_002361471.1;Name=WP_002361471.1;gbkey=CDS;gene=yscK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002361471.1;locus_tag=AD853_RS17895;product=SctK family type III secretion system sorting platform protein YscK;protein_id=WP_002361471.1;transl_table=11 NZ_CPUY01000026.1 RefSeq gene 6425 7159 . - . ID=gene-AD853_RS17900;Name=yscJ;gbkey=Gene;gene=yscJ;gene_biotype=protein_coding;locus_tag=AD853_RS17900;old_locus_tag=ERS008462_03612 NZ_CPUY01000026.1 Protein Homology CDS 6425 7159 . - 0 ID=cds-WP_002212912.1;Parent=gene-AD853_RS17900;Dbxref=GenBank:WP_002212912.1;Name=WP_002212912.1;gbkey=CDS;gene=yscJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212912.1;locus_tag=AD853_RS17900;product=SctJ family type III secretion inner membrane ring lipoprotein YscJ;protein_id=WP_002212912.1;transl_table=11 NZ_CPUY01000026.1 RefSeq gene 7166 7513 . - . ID=gene-AD853_RS17905;Name=lcrO;gbkey=Gene;gene=lcrO;gene_biotype=protein_coding;gene_synonym=yscI;locus_tag=AD853_RS17905;old_locus_tag=ERS008462_03613 NZ_CPUY01000026.1 Protein Homology CDS 7166 7513 . - 0 ID=cds-WP_002212914.1;Parent=gene-AD853_RS17905;Dbxref=GenBank:WP_002212914.1;Name=WP_002212914.1;gbkey=CDS;gene=lcrO;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212914.1;locus_tag=AD853_RS17905;product=SctI family type III secretion system inner rod subunit LcrO;protein_id=WP_002212914.1;transl_table=11 NZ_CPUY01000026.1 RefSeq gene 7514 8011 . - . ID=gene-AD853_RS17910;Name=yopR;gbkey=Gene;gene=yopR;gene_biotype=protein_coding;gene_synonym=yscH;locus_tag=AD853_RS17910;old_locus_tag=ERS008462_03614 NZ_CPUY01000026.1 Protein Homology CDS 7514 8011 . - 0 ID=cds-WP_050124639.1;Parent=gene-AD853_RS17910;Dbxref=GenBank:WP_050124639.1;Name=WP_050124639.1;gbkey=CDS;gene=yopR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212915.1;locus_tag=AD853_RS17910;product=T3SS polymerization control protein YopR;protein_id=WP_050124639.1;transl_table=11 NZ_CPUY01000026.1 RefSeq gene 8008 8355 . - . ID=gene-AD853_RS17915;Name=yscG;gbkey=Gene;gene=yscG;gene_biotype=protein_coding;locus_tag=AD853_RS17915;old_locus_tag=ERS008462_03615 NZ_CPUY01000026.1 Protein Homology CDS 8008 8355 . - 0 ID=cds-WP_011191389.1;Parent=gene-AD853_RS17915;Dbxref=GenBank:WP_011191389.1;Name=WP_011191389.1;gbkey=CDS;gene=yscG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002229801.1;locus_tag=AD853_RS17915;product=type III secretion system chaperone YscG;protein_id=WP_011191389.1;transl_table=11 NZ_CPUY01000026.1 RefSeq gene 8357 8620 . - . ID=gene-AD853_RS17920;Name=yscF;gbkey=Gene;gene=yscF;gene_biotype=protein_coding;locus_tag=AD853_RS17920;old_locus_tag=ERS008462_03616 NZ_CPUY01000026.1 Protein Homology CDS 8357 8620 . - 0 ID=cds-WP_002212916.1;Parent=gene-AD853_RS17920;Dbxref=GenBank:WP_002212916.1;Name=WP_002212916.1;gbkey=CDS;gene=yscF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212916.1;locus_tag=AD853_RS17920;product=type III secretion system needle filament protein YscF;protein_id=WP_002212916.1;transl_table=11 NZ_CPUY01000026.1 RefSeq gene 8621 8821 . - . ID=gene-AD853_RS17925;Name=yscE;gbkey=Gene;gene=yscE;gene_biotype=protein_coding;locus_tag=AD853_RS17925;old_locus_tag=ERS008462_03617 NZ_CPUY01000026.1 Protein Homology CDS 8621 8821 . - 0 ID=cds-WP_002212917.1;Parent=gene-AD853_RS17925;Dbxref=GenBank:WP_002212917.1;Name=WP_002212917.1;gbkey=CDS;gene=yscE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212917.1;locus_tag=AD853_RS17925;product=type III secretion system co-chaperone YscE;protein_id=WP_002212917.1;transl_table=11 NZ_CPUY01000026.1 RefSeq gene 8818 10077 . - . ID=gene-AD853_RS17930;Name=yscD;gbkey=Gene;gene=yscD;gene_biotype=protein_coding;locus_tag=AD853_RS17930;old_locus_tag=ERS008462_03618 NZ_CPUY01000026.1 Protein Homology CDS 8818 10077 . - 0 ID=cds-WP_002212919.1;Parent=gene-AD853_RS17930;Dbxref=GenBank:WP_002212919.1;Name=WP_002212919.1;gbkey=CDS;gene=yscD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212919.1;locus_tag=AD853_RS17930;product=SctD family type III secretion system inner membrane ring subunit YscD;protein_id=WP_002212919.1;transl_table=11 NZ_CPUY01000026.1 RefSeq gene 10074 11897 . - . ID=gene-AD853_RS17935;Name=yscC;gbkey=Gene;gene=yscC;gene_biotype=protein_coding;locus_tag=AD853_RS17935;old_locus_tag=ERS008462_03619 NZ_CPUY01000026.1 Protein Homology CDS 10074 11897 . - 0 ID=cds-WP_050124640.1;Parent=gene-AD853_RS17935;Dbxref=GenBank:WP_050124640.1;Name=WP_050124640.1;gbkey=CDS;gene=yscC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212923.1;locus_tag=AD853_RS17935;product=SctC family type III secretion system outer membrane ring subunit YscC;protein_id=WP_050124640.1;transl_table=11 NZ_CPUY01000026.1 RefSeq gene 11903 12316 . - . ID=gene-AD853_RS17940;Name=yscB;gbkey=Gene;gene=yscB;gene_biotype=protein_coding;locus_tag=AD853_RS17940;old_locus_tag=ERS008462_03620 NZ_CPUY01000026.1 Protein Homology CDS 11903 12316 . - 0 ID=cds-WP_050124641.1;Parent=gene-AD853_RS17940;Dbxref=GenBank:WP_050124641.1;Name=WP_050124641.1;gbkey=CDS;gene=yscB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212925.1;locus_tag=AD853_RS17940;product=type III secretion system chaperone YscB;protein_id=WP_050124641.1;transl_table=11 NZ_CPUY01000026.1 RefSeq gene 12542 12640 . - . ID=gene-AD853_RS17945;Name=yscA;gbkey=Gene;gene=yscA;gene_biotype=protein_coding;locus_tag=AD853_RS17945 NZ_CPUY01000026.1 Protein Homology CDS 12542 12640 . - 0 ID=cds-WP_002229797.1;Parent=gene-AD853_RS17945;Dbxref=GenBank:WP_002229797.1;Name=WP_002229797.1;gbkey=CDS;gene=yscA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002229797.1;locus_tag=AD853_RS17945;product=type III secretion system protein YscA;protein_id=WP_002229797.1;transl_table=11 NZ_CPUY01000026.1 RefSeq gene 12719 13534 . - . ID=gene-AD853_RS17950;Name=virF;gbkey=Gene;gene=virF;gene_biotype=protein_coding;locus_tag=AD853_RS17950;old_locus_tag=ERS008462_03621 NZ_CPUY01000026.1 Protein Homology CDS 12719 13534 . - 0 ID=cds-WP_002212931.1;Parent=gene-AD853_RS17950;Dbxref=GenBank:WP_002212931.1;Name=WP_002212931.1;gbkey=CDS;gene=virF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010891222.1;locus_tag=AD853_RS17950;product=virulence regulon transcriptional activator VirF;protein_id=WP_002212931.1;transl_table=11 NZ_CPUY01000026.1 RefSeq gene 13658 14053 . - . ID=gene-AD853_RS17955;Name=yscW;gbkey=Gene;gene=yscW;gene_biotype=protein_coding;locus_tag=AD853_RS17955;old_locus_tag=ERS008462_03622 NZ_CPUY01000026.1 Protein Homology CDS 13658 14053 . - 0 ID=cds-WP_002222527.1;Parent=gene-AD853_RS17955;Dbxref=GenBank:WP_002222527.1;Name=WP_002222527.1;gbkey=CDS;gene=yscW;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002222527.1;locus_tag=AD853_RS17955;product=type III secretion system pilotin YscW;protein_id=WP_002222527.1;transl_table=11 NZ_CPUY01000026.1 RefSeq gene 14628 15692 . - . ID=gene-AD853_RS17960;Name=yscU;gbkey=Gene;gene=yscU;gene_biotype=protein_coding;locus_tag=AD853_RS17960;old_locus_tag=ERS008462_03623 NZ_CPUY01000026.1 Protein Homology CDS 14628 15692 . - 0 ID=cds-WP_002212936.1;Parent=gene-AD853_RS17960;Dbxref=GenBank:WP_002212936.1;Name=WP_002212936.1;gbkey=CDS;gene=yscU;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212936.1;locus_tag=AD853_RS17960;product=type III secretion system export apparatus switch protein YscU;protein_id=WP_002212936.1;transl_table=11 NZ_CPUY01000026.1 RefSeq gene 15692 16477 . - . ID=gene-AD853_RS17965;Name=yscT;gbkey=Gene;gene=yscT;gene_biotype=protein_coding;locus_tag=AD853_RS17965;old_locus_tag=ERS008462_03624 NZ_CPUY01000026.1 Protein Homology CDS 15692 16477 . - 0 ID=cds-WP_002212938.1;Parent=gene-AD853_RS17965;Dbxref=GenBank:WP_002212938.1;Name=WP_002212938.1;gbkey=CDS;gene=yscT;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212938.1;locus_tag=AD853_RS17965;product=SctT family type III secretion system export apparatus subunit YscT;protein_id=WP_002212938.1;transl_table=11 NZ_CPUY01000026.1 RefSeq gene 16474 16740 . - . ID=gene-AD853_RS17970;Name=yscS;gbkey=Gene;gene=yscS;gene_biotype=protein_coding;locus_tag=AD853_RS17970;old_locus_tag=ERS008462_03625 NZ_CPUY01000026.1 Protein Homology CDS 16474 16740 . - 0 ID=cds-WP_002212945.1;Parent=gene-AD853_RS17970;Dbxref=GenBank:WP_002212945.1;Name=WP_002212945.1;gbkey=CDS;gene=yscS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212945.1;locus_tag=AD853_RS17970;product=SctS family type III secretion system export apparatus subunit YscS;protein_id=WP_002212945.1;transl_table=11 NZ_CPUY01000026.1 RefSeq gene 16742 17395 . - . ID=gene-AD853_RS17975;Name=yscR;gbkey=Gene;gene=yscR;gene_biotype=protein_coding;locus_tag=AD853_RS17975;old_locus_tag=ERS008462_03626 NZ_CPUY01000026.1 Protein Homology CDS 16742 17395 . - 0 ID=cds-WP_002212947.1;Parent=gene-AD853_RS17975;Dbxref=GenBank:WP_002212947.1;Name=WP_002212947.1;gbkey=CDS;gene=yscR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212947.1;locus_tag=AD853_RS17975;product=SctR family type III secretion system export apparatus subunit YscR;protein_id=WP_002212947.1;transl_table=11 NZ_CPUY01000026.1 RefSeq gene 17392 18315 . - . ID=gene-AD853_RS17980;Name=yscQ;gbkey=Gene;gene=yscQ;gene_biotype=protein_coding;locus_tag=AD853_RS17980;old_locus_tag=ERS008462_03627 NZ_CPUY01000026.1 Protein Homology CDS 17392 18315 . - 0 ID=cds-WP_050124642.1;Parent=gene-AD853_RS17980;Dbxref=GenBank:WP_050124642.1;Name=WP_050124642.1;gbkey=CDS;gene=yscQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212948.1;locus_tag=AD853_RS17980;product=SctQ family type III secretion system cytoplasmic ring protein YscQ;protein_id=WP_050124642.1;transl_table=11 NZ_CPUY01000026.1 RefSeq gene 18312 19679 . - . ID=gene-AD853_RS17985;Name=yscP;gbkey=Gene;gene=yscP;gene_biotype=protein_coding;locus_tag=AD853_RS17985;old_locus_tag=ERS008462_03628 NZ_CPUY01000026.1 Protein Homology CDS 18312 19679 . - 0 ID=cds-WP_050124643.1;Parent=gene-AD853_RS17985;Dbxref=GenBank:WP_050124643.1;Name=WP_050124643.1;gbkey=CDS;gene=yscP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212950.1;locus_tag=AD853_RS17985;product=type III secretion system needle length determinant YscP;protein_id=WP_050124643.1;transl_table=11 NZ_CPUY01000026.1 RefSeq gene 19679 20143 . - . ID=gene-AD853_RS17990;Name=yscO;gbkey=Gene;gene=yscO;gene_biotype=protein_coding;locus_tag=AD853_RS17990;old_locus_tag=ERS008462_03629 NZ_CPUY01000026.1 Protein Homology CDS 19679 20143 . - 0 ID=cds-WP_002212952.1;Parent=gene-AD853_RS17990;Dbxref=GenBank:WP_002212952.1;Name=WP_002212952.1;gbkey=CDS;gene=yscO;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005176819.1;locus_tag=AD853_RS17990;product=type III secretion system central stalk protein YscO;protein_id=WP_002212952.1;transl_table=11 NZ_CPUY01000026.1 RefSeq gene 20140 21459 . - . ID=gene-AD853_RS17995;Name=yscN;gbkey=Gene;gene=yscN;gene_biotype=protein_coding;locus_tag=AD853_RS17995;old_locus_tag=ERS008462_03630 NZ_CPUY01000026.1 Protein Homology CDS 20140 21459 . - 0 ID=cds-WP_002212955.1;Parent=gene-AD853_RS17995;Dbxref=GenBank:WP_002212955.1;Name=WP_002212955.1;gbkey=CDS;gene=yscN;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212955.1;locus_tag=AD853_RS17995;product=SctN family type III secretion system ATPase YscN;protein_id=WP_002212955.1;transl_table=11 NZ_CPUY01000026.1 RefSeq gene 21657 22538 . + . ID=gene-AD853_RS18000;Name=yopN;gbkey=Gene;gene=yopN;gene_biotype=protein_coding;locus_tag=AD853_RS18000;old_locus_tag=ERS008462_03631 NZ_CPUY01000026.1 Protein Homology CDS 21657 22538 . + 0 ID=cds-WP_002212958.1;Parent=gene-AD853_RS18000;Dbxref=GenBank:WP_002212958.1;Name=WP_002212958.1;gbkey=CDS;gene=yopN;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011191384.1;locus_tag=AD853_RS18000;product=SctW family type III secretion system gatekeeper subunit YopN;protein_id=WP_002212958.1;transl_table=11 NZ_CPUY01000026.1 RefSeq gene 22519 22797 . + . ID=gene-AD853_RS18005;Name=tyeA;gbkey=Gene;gene=tyeA;gene_biotype=protein_coding;locus_tag=AD853_RS18005;old_locus_tag=ERS008462_03632 NZ_CPUY01000026.1 Protein Homology CDS 22519 22797 . + 0 ID=cds-WP_002212965.1;Parent=gene-AD853_RS18005;Dbxref=GenBank:WP_002212965.1;Name=WP_002212965.1;gbkey=CDS;gene=tyeA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212965.1;locus_tag=AD853_RS18005;product=type III secretion system gatekeeper subunit TyeA;protein_id=WP_002212965.1;transl_table=11 NZ_CPUY01000026.1 RefSeq gene 22784 23155 . + . ID=gene-AD853_RS18010;Name=sycN;gbkey=Gene;gene=sycN;gene_biotype=protein_coding;locus_tag=AD853_RS18010;old_locus_tag=ERS008462_03633 NZ_CPUY01000026.1 Protein Homology CDS 22784 23155 . + 0 ID=cds-WP_002229794.1;Parent=gene-AD853_RS18010;Dbxref=GenBank:WP_002229794.1;Name=WP_002229794.1;Ontology_term=GO:0030254;gbkey=CDS;gene=sycN;go_process=protein secretion by the type III secretion system|0030254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002229794.1;locus_tag=AD853_RS18010;product=type III secretion chaperone SycN;protein_id=WP_002229794.1;transl_table=11 NZ_CPUY01000026.1 RefSeq gene 23152 23520 . + . ID=gene-AD853_RS18015;Name=yscX;gbkey=Gene;gene=yscX;gene_biotype=protein_coding;locus_tag=AD853_RS18015;old_locus_tag=ERS008462_03634 NZ_CPUY01000026.1 Protein Homology CDS 23152 23520 . + 0 ID=cds-WP_002212969.1;Parent=gene-AD853_RS18015;Dbxref=GenBank:WP_002212969.1;Name=WP_002212969.1;gbkey=CDS;gene=yscX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212969.1;locus_tag=AD853_RS18015;product=type III secretion system protein YscX;protein_id=WP_002212969.1;transl_table=11 NZ_CPUY01000026.1 RefSeq gene 23517 23861 . + . ID=gene-AD853_RS18020;Name=yscY;gbkey=Gene;gene=yscY;gene_biotype=protein_coding;locus_tag=AD853_RS18020;old_locus_tag=ERS008462_03635 NZ_CPUY01000026.1 Protein Homology CDS 23517 23861 . + 0 ID=cds-WP_002229791.1;Parent=gene-AD853_RS18020;Dbxref=GenBank:WP_002229791.1;Name=WP_002229791.1;gbkey=CDS;gene=yscY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002229791.1;locus_tag=AD853_RS18020;product=type III secretion system chaperone YscY;protein_id=WP_002229791.1;transl_table=11 NZ_CPUY01000026.1 RefSeq gene 23848 25962 . + . ID=gene-AD853_RS18025;Name=lcrD;gbkey=Gene;gene=lcrD;gene_biotype=protein_coding;locus_tag=AD853_RS18025;old_locus_tag=ERS008462_03636 NZ_CPUY01000026.1 Protein Homology CDS 23848 25962 . + 0 ID=cds-WP_002212971.1;Parent=gene-AD853_RS18025;Dbxref=GenBank:WP_002212971.1;Name=WP_002212971.1;gbkey=CDS;gene=lcrD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212971.1;locus_tag=AD853_RS18025;product=SctV family type III secretion system export apparatus subunit LcrD;protein_id=WP_002212971.1;transl_table=11 NZ_CPUY01000026.1 RefSeq pseudogene 25959 26398 . + . ID=gene-AD853_RS18030;Name=lcrR;gbkey=Gene;gene=lcrR;gene_biotype=pseudogene;locus_tag=AD853_RS18030;old_locus_tag=ERS008462_03637;pseudo=true NZ_CPUY01000026.1 Protein Homology CDS 25959 26398 . + 0 ID=cds-AD853_RS18030;Parent=gene-AD853_RS18030;Note=frameshifted;gbkey=CDS;gene=lcrR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002220918.1;locus_tag=AD853_RS18030;product=type III secretion system chaperone LcrR;pseudo=true;transl_table=11 NZ_CPUY01000026.1 RefSeq gene 26440 26727 . + . ID=gene-AD853_RS18035;Name=lcrG;gbkey=Gene;gene=lcrG;gene_biotype=protein_coding;locus_tag=AD853_RS18035;old_locus_tag=ERS008462_03638 NZ_CPUY01000026.1 Protein Homology CDS 26440 26727 . + 0 ID=cds-WP_002212973.1;Parent=gene-AD853_RS18035;Dbxref=GenBank:WP_002212973.1;Name=WP_002212973.1;gbkey=CDS;gene=lcrG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212973.1;locus_tag=AD853_RS18035;product=type III secretion system chaperone LcrG;protein_id=WP_002212973.1;transl_table=11 NZ_CPUY01000026.1 RefSeq gene 26729 27718 . + . ID=gene-AD853_RS18040;Name=lcrV;gbkey=Gene;gene=lcrV;gene_biotype=protein_coding;locus_tag=AD853_RS18040;old_locus_tag=ERS008462_03639 NZ_CPUY01000026.1 Protein Homology CDS 26729 27718 . + 0 ID=cds-WP_050124644.1;Parent=gene-AD853_RS18040;Dbxref=GenBank:WP_050124644.1;Name=WP_050124644.1;gbkey=CDS;gene=lcrV;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212981.1;locus_tag=AD853_RS18040;product=type III secretion system needle tip protein LcrV;protein_id=WP_050124644.1;transl_table=11 NZ_CPUY01000026.1 RefSeq gene 27747 28253 . + . ID=gene-AD853_RS18045;Name=lcrH;gbkey=Gene;gene=lcrH;gene_biotype=protein_coding;gene_synonym=sycD;locus_tag=AD853_RS18045;old_locus_tag=ERS008462_03640 NZ_CPUY01000026.1 Protein Homology CDS 27747 28253 . + 0 ID=cds-WP_011117633.1;Parent=gene-AD853_RS18045;Dbxref=GenBank:WP_011117633.1;Name=WP_011117633.1;gbkey=CDS;gene=lcrH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011117633.1;locus_tag=AD853_RS18045;product=type III secretion system chaperone SycD/LcrH;protein_id=WP_011117633.1;transl_table=11 NZ_CPUY01000026.1 RefSeq gene 28231 29436 . + . ID=gene-AD853_RS18050;Name=yopB;gbkey=Gene;gene=yopB;gene_biotype=protein_coding;gene_synonym=sctE;locus_tag=AD853_RS18050;old_locus_tag=ERS008462_03641 NZ_CPUY01000026.1 Protein Homology CDS 28231 29436 . + 0 ID=cds-WP_050124645.1;Parent=gene-AD853_RS18050;Dbxref=GenBank:WP_050124645.1;Name=WP_050124645.1;gbkey=CDS;gene=yopB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011117632.1;locus_tag=AD853_RS18050;product=type III secretion system translocon subunit YopB;protein_id=WP_050124645.1;transl_table=11 NZ_CPUY01000026.1 RefSeq gene 29455 30375 . + . ID=gene-AD853_RS18055;Name=yopD;gbkey=Gene;gene=yopD;gene_biotype=protein_coding;gene_synonym=sctB;locus_tag=AD853_RS18055;old_locus_tag=ERS008462_03642 NZ_CPUY01000026.1 Protein Homology CDS 29455 30375 . + 0 ID=cds-WP_050124646.1;Parent=gene-AD853_RS18055;Dbxref=GenBank:WP_050124646.1;Name=WP_050124646.1;gbkey=CDS;gene=yopD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011117631.1;locus_tag=AD853_RS18055;product=type III secretion system translocon subunit YopD;protein_id=WP_050124646.1;transl_table=11 NZ_CPUY01000026.1 RefSeq pseudogene 30843 31480 . - . ID=gene-AD853_RS21075;Name=AD853_RS21075;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD853_RS21075;pseudo=true NZ_CPUY01000026.1 Protein Homology CDS 30843 31480 . - 0 ID=cds-AD853_RS21075;Parent=gene-AD853_RS21075;Note=frameshifted%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012548890.1;locus_tag=AD853_RS21075;product=IS6 family transposase;pseudo=true;transl_table=11 NZ_CPUY01000026.1 RefSeq gene 31501 31716 . + . ID=gene-AD853_RS18065;Name=AD853_RS18065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS18065 NZ_CPUY01000026.1 GeneMarkS-2+ CDS 31501 31716 . + 0 ID=cds-WP_011191379.1;Parent=gene-AD853_RS18065;Dbxref=GenBank:WP_011191379.1;Name=WP_011191379.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AD853_RS18065;product=hypothetical protein;protein_id=WP_011191379.1;transl_table=11 NZ_CPUY01000026.1 RefSeq gene 32104 33201 . + . ID=gene-AD853_RS18070;Name=AD853_RS18070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS18070;old_locus_tag=ERS008462_03644 NZ_CPUY01000026.1 Protein Homology CDS 32104 33201 . + 0 ID=cds-WP_050124647.1;Parent=gene-AD853_RS18070;Dbxref=GenBank:WP_050124647.1;Name=WP_050124647.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002229779.1;locus_tag=AD853_RS18070;product=leucine-rich repeat domain-containing protein;protein_id=WP_050124647.1;transl_table=11 NZ_CPUY01000026.1 RefSeq pseudogene 33244 33561 . - . ID=gene-AD853_RS18075;Name=AD853_RS18075;end_range=33561,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD853_RS18075;old_locus_tag=ERS008462_03645;partial=true;pseudo=true NZ_CPUY01000026.1 Protein Homology CDS 33244 33561 . - 0 ID=cds-AD853_RS18075;Parent=gene-AD853_RS18075;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=33561,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005054087.1;locus_tag=AD853_RS18075;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_CPUY01000026.1 RefSeq gene 33443 33688 . - . ID=gene-AD853_RS22710;Name=AD853_RS22710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS22710 NZ_CPUY01000026.1 Protein Homology CDS 33443 33688 . - 0 ID=cds-WP_116442925.1;Parent=gene-AD853_RS22710;Dbxref=GenBank:WP_116442925.1;Name=WP_116442925.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: protein motif:HMM:NF013068.6;locus_tag=AD853_RS22710;product=transposase;protein_id=WP_116442925.1;transl_table=11 NZ_CPUY01000026.1 RefSeq pseudogene 33691 33909 . + . ID=gene-AD853_RS21085;Name=AD853_RS21085;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD853_RS21085;partial=true;pseudo=true;start_range=.,33691 NZ_CPUY01000026.1 Protein Homology CDS 33691 33909 . + 0 ID=cds-AD853_RS21085;Parent=gene-AD853_RS21085;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558335.1;locus_tag=AD853_RS21085;partial=true;product=DDE-type integrase/transposase/recombinase;pseudo=true;start_range=.,33691;transl_table=11 NZ_CPUY01000026.1 RefSeq gene 34436 34855 . - . ID=gene-AD853_RS18080;Name=AD853_RS18080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS18080;old_locus_tag=ERS008462_03646 NZ_CPUY01000026.1 Protein Homology CDS 34436 34855 . - 0 ID=cds-WP_050124648.1;Parent=gene-AD853_RS18080;Dbxref=GenBank:WP_050124648.1;Name=WP_050124648.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011191376.1;locus_tag=AD853_RS18080;product=hypothetical protein;protein_id=WP_050124648.1;transl_table=11 NZ_CPUY01000026.1 RefSeq pseudogene 34872 35128 . - . ID=gene-AD853_RS21090;Name=AD853_RS21090;end_range=35128,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD853_RS21090;partial=true;pseudo=true NZ_CPUY01000026.1 Protein Homology CDS 34872 35128 . - 0 ID=cds-AD853_RS21090;Parent=gene-AD853_RS21090;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=35128,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558335.1;locus_tag=AD853_RS21090;partial=true;product=DDE-type integrase/transposase/recombinase;pseudo=true;transl_table=11 NZ_CPUY01000026.1 RefSeq gene 35558 35950 . - . ID=gene-AD853_RS18090;Name=sycT;gbkey=Gene;gene=sycT;gene_biotype=protein_coding;locus_tag=AD853_RS18090;old_locus_tag=ERS008462_03648 NZ_CPUY01000026.1 Protein Homology CDS 35558 35950 . - 0 ID=cds-WP_011191375.1;Parent=gene-AD853_RS18090;Dbxref=GenBank:WP_011191375.1;Name=WP_011191375.1;gbkey=CDS;gene=sycT;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002213004.1;locus_tag=AD853_RS18090;product=type III secretion system chaperone SycT;protein_id=WP_011191375.1;transl_table=11 NZ_CPUY01000026.1 RefSeq gene 35950 36918 . - . ID=gene-AD853_RS18095;Name=yopT;gbkey=Gene;gene=yopT;gene_biotype=protein_coding;locus_tag=AD853_RS18095;old_locus_tag=ERS008462_03649 NZ_CPUY01000026.1 Protein Homology CDS 35950 36918 . - 0 ID=cds-WP_011191374.1;Parent=gene-AD853_RS18095;Dbxref=GenBank:WP_011191374.1;Name=WP_011191374.1;gbkey=CDS;gene=yopT;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002213006.1;locus_tag=AD853_RS18095;product=T3SS effector cysteine protease YopT;protein_id=WP_011191374.1;transl_table=11 NZ_CPUY01000026.1 RefSeq gene 37418 37966 . + . ID=gene-AD853_RS18100;Name=yopK;gbkey=Gene;gene=yopK;gene_biotype=protein_coding;gene_synonym=yopQ;locus_tag=AD853_RS18100;old_locus_tag=ERS008462_03650 NZ_CPUY01000026.1 Protein Homology CDS 37418 37966 . + 0 ID=cds-WP_042592523.1;Parent=gene-AD853_RS18100;Dbxref=GenBank:WP_042592523.1;Name=WP_042592523.1;gbkey=CDS;gene=yopK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002213007.1;locus_tag=AD853_RS18100;product=type III secretion system effector YopK;protein_id=WP_042592523.1;transl_table=11 NZ_CPUY01000026.1 RefSeq pseudogene 38125 38411 . + . ID=gene-AD853_RS21655;Name=AD853_RS21655;end_range=38411,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD853_RS21655;partial=true;pseudo=true;start_range=.,38125 NZ_CPUY01000026.1 Protein Homology CDS 38125 38411 . + 0 ID=cds-AD853_RS21655;Parent=gene-AD853_RS21655;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=38411,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558178.1;locus_tag=AD853_RS21655;partial=true;product=IS3 family transposase;pseudo=true;start_range=.,38125;transl_table=11 NZ_CPUY01000026.1 RefSeq gene 38448 39185 . + . ID=gene-AD853_RS18105;Name=traT;gbkey=Gene;gene=traT;gene_biotype=protein_coding;locus_tag=AD853_RS18105;old_locus_tag=ERS008462_03651 NZ_CPUY01000026.1 Protein Homology CDS 38448 39185 . + 0 ID=cds-WP_057534093.1;Parent=gene-AD853_RS18105;Dbxref=GenBank:WP_057534093.1;Name=WP_057534093.1;gbkey=CDS;gene=traT;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001485398.1;locus_tag=AD853_RS18105;product=conjugal transfer complement resistance protein TraT;protein_id=WP_057534093.1;transl_table=11 NZ_CPUY01000026.1 RefSeq pseudogene 39292 40191 . + . ID=gene-AD853_RS22340;Name=AD853_RS22340;end_range=40191,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD853_RS22340;partial=true;pseudo=true NZ_CPUY01000026.1 Protein Homology CDS 39292 40191 . + 0 ID=cds-AD853_RS22340;Parent=gene-AD853_RS22340;Note=frameshifted%3B internal stop%3B incomplete%3B missing C-terminus;Ontology_term=GO:0004803;end_range=40191,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558235.1;locus_tag=AD853_RS22340;partial=true;product=IS3 family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_CPUY01000027.1 1 39899 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=633 NZ_CPUY01000027.1 RefSeq region 1 39899 . + . ID=NZ_CPUY01000027.1:1..39899;Dbxref=taxon:633;collection-date=1900/2008;country=South Africa;gbkey=Src;genome=genomic;isolation-source=not known;mol_type=genomic DNA;nat-host=pig;serovar=O:3;strain=IP32544 NZ_CPUY01000027.1 RefSeq gene 364 1293 . + . ID=gene-AD853_RS18120;Name=AD853_RS18120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS18120;old_locus_tag=ERS008462_03654 NZ_CPUY01000027.1 Protein Homology CDS 364 1293 . + 0 ID=cds-WP_038824602.1;Parent=gene-AD853_RS18120;Dbxref=GenBank:WP_038824602.1;Name=WP_038824602.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210776.1;locus_tag=AD853_RS18120;product=DUF4097 family beta strand repeat-containing protein;protein_id=WP_038824602.1;transl_table=11 NZ_CPUY01000027.1 RefSeq gene 1593 2531 . + . ID=gene-AD853_RS18125;Name=dusC;gbkey=Gene;gene=dusC;gene_biotype=protein_coding;locus_tag=AD853_RS18125;old_locus_tag=ERS008462_03655 NZ_CPUY01000027.1 Protein Homology CDS 1593 2531 . + 0 ID=cds-WP_002228612.1;Parent=gene-AD853_RS18125;Dbxref=GenBank:WP_002228612.1;Name=WP_002228612.1;Ontology_term=GO:0002943,GO:0017150,GO:0050660;gbkey=CDS;gene=dusC;go_function=tRNA dihydrouridine synthase activity|0017150||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA dihydrouridine synthesis|0002943||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002228612.1;locus_tag=AD853_RS18125;product=tRNA dihydrouridine(16) synthase DusC;protein_id=WP_002228612.1;transl_table=11 NZ_CPUY01000027.1 RefSeq gene 2605 2784 . - . ID=gene-AD853_RS18130;Name=AD853_RS18130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS18130;old_locus_tag=ERS008462_03656 NZ_CPUY01000027.1 Protein Homology CDS 2605 2784 . - 0 ID=cds-WP_002210778.1;Parent=gene-AD853_RS18130;Dbxref=GenBank:WP_002210778.1;Name=WP_002210778.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210778.1;locus_tag=AD853_RS18130;product=hypothetical protein;protein_id=WP_002210778.1;transl_table=11 NZ_CPUY01000027.1 RefSeq gene 3124 4059 . + . ID=gene-AD853_RS18135;Name=pbpG;gbkey=Gene;gene=pbpG;gene_biotype=protein_coding;locus_tag=AD853_RS18135;old_locus_tag=ERS008462_03657 NZ_CPUY01000027.1 Protein Homology CDS 3124 4059 . + 0 ID=cds-WP_038824604.1;Parent=gene-AD853_RS18135;Dbxref=GenBank:WP_038824604.1;Name=WP_038824604.1;Ontology_term=GO:0006508,GO:0009002;gbkey=CDS;gene=pbpG;go_function=serine-type D-Ala-D-Ala carboxypeptidase activity|0009002||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105464.1;locus_tag=AD853_RS18135;product=D-alanyl-D-alanine endopeptidase;protein_id=WP_038824604.1;transl_table=11 NZ_CPUY01000027.1 RefSeq gene 4180 5892 . - . ID=gene-AD853_RS18140;Name=dld;gbkey=Gene;gene=dld;gene_biotype=protein_coding;locus_tag=AD853_RS18140;old_locus_tag=ERS008462_03658 NZ_CPUY01000027.1 Protein Homology CDS 4180 5892 . - 0 ID=cds-WP_038824601.1;Parent=gene-AD853_RS18140;Dbxref=GenBank:WP_038824601.1;Name=WP_038824601.1;Ontology_term=GO:0006089,GO:0016901;gbkey=CDS;gene=dld;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C quinone or similar compound as acceptor|0016901||IEA;go_process=lactate metabolic process|0006089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210781.1;locus_tag=AD853_RS18140;product=D-lactate dehydrogenase;protein_id=WP_038824601.1;transl_table=11 NZ_CPUY01000027.1 RefSeq gene 6102 6641 . + . ID=gene-AD853_RS18145;Name=cyaB;gbkey=Gene;gene=cyaB;gene_biotype=protein_coding;locus_tag=AD853_RS18145;old_locus_tag=ERS008462_03659 NZ_CPUY01000027.1 Protein Homology CDS 6102 6641 . + 0 ID=cds-WP_002210782.1;Parent=gene-AD853_RS18145;Dbxref=GenBank:WP_002210782.1;Name=WP_002210782.1;gbkey=CDS;gene=cyaB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210782.1;locus_tag=AD853_RS18145;product=class IV adenylate cyclase;protein_id=WP_002210782.1;transl_table=11 NZ_CPUY01000027.1 RefSeq gene 6667 7008 . - . ID=gene-AD853_RS18150;Name=yajD;gbkey=Gene;gene=yajD;gene_biotype=protein_coding;locus_tag=AD853_RS18150;old_locus_tag=ERS008462_03660 NZ_CPUY01000027.1 Protein Homology CDS 6667 7008 . - 0 ID=cds-WP_002214185.1;Parent=gene-AD853_RS18150;Dbxref=GenBank:WP_002214185.1;Name=WP_002214185.1;gbkey=CDS;gene=yajD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005189583.1;locus_tag=AD853_RS18150;product=HNH nuclease YajD;protein_id=WP_002214185.1;transl_table=11 NZ_CPUY01000027.1 RefSeq gene 7321 8424 . + . ID=gene-AD853_RS18155;Name=AD853_RS18155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS18155;old_locus_tag=ERS008462_03661 NZ_CPUY01000027.1 Protein Homology CDS 7321 8424 . + 0 ID=cds-WP_011191976.1;Parent=gene-AD853_RS18155;Dbxref=GenBank:WP_011191976.1;Name=WP_011191976.1;Ontology_term=GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011191976.1;locus_tag=AD853_RS18155;product=suppressor of fused domain protein;protein_id=WP_011191976.1;transl_table=11 NZ_CPUY01000027.1 RefSeq gene 8609 8857 . + . ID=gene-AD853_RS18160;Name=AD853_RS18160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS18160;old_locus_tag=ERS008462_03662 NZ_CPUY01000027.1 Protein Homology CDS 8609 8857 . + 0 ID=cds-WP_002210786.1;Parent=gene-AD853_RS18160;Dbxref=GenBank:WP_002210786.1;Name=WP_002210786.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227447.1;locus_tag=AD853_RS18160;product=GlsB/YeaQ/YmgE family stress response membrane protein;protein_id=WP_002210786.1;transl_table=11 NZ_CPUY01000027.1 RefSeq gene 9065 9901 . + . ID=gene-AD853_RS18165;Name=phnC;gbkey=Gene;gene=phnC;gene_biotype=protein_coding;locus_tag=AD853_RS18165;old_locus_tag=ERS008462_03663 NZ_CPUY01000027.1 Protein Homology CDS 9065 9901 . + 0 ID=cds-WP_002210787.1;Parent=gene-AD853_RS18165;Dbxref=GenBank:WP_002210787.1;Name=WP_002210787.1;Ontology_term=GO:0015716,GO:0005524,GO:0015416,GO:0016020;gbkey=CDS;gene=phnC;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type phosphonate transporter activity|0015416||IEA;go_process=organic phosphonate transport|0015716||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005189589.1;locus_tag=AD853_RS18165;product=phosphonate ABC transporter ATP-binding protein;protein_id=WP_002210787.1;transl_table=11 NZ_CPUY01000027.1 RefSeq gene 9938 10867 . + . ID=gene-AD853_RS18170;Name=phnD;gbkey=Gene;gene=phnD;gene_biotype=protein_coding;locus_tag=AD853_RS18170;old_locus_tag=ERS008462_03664 NZ_CPUY01000027.1 Protein Homology CDS 9938 10867 . + 0 ID=cds-WP_011191977.1;Parent=gene-AD853_RS18170;Dbxref=GenBank:WP_011191977.1;Name=WP_011191977.1;Ontology_term=GO:0015716,GO:0043190;gbkey=CDS;gene=phnD;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_process=organic phosphonate transport|0015716||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005189592.1;locus_tag=AD853_RS18170;product=phosphonate ABC transporter substrate-binding protein;protein_id=WP_011191977.1;transl_table=11 NZ_CPUY01000027.1 RefSeq gene 10971 11831 . + . ID=gene-AD853_RS18175;Name=phnE;gbkey=Gene;gene=phnE;gene_biotype=protein_coding;locus_tag=AD853_RS18175;old_locus_tag=ERS008462_03665 NZ_CPUY01000027.1 Protein Homology CDS 10971 11831 . + 0 ID=cds-WP_002210789.1;Parent=gene-AD853_RS18175;Dbxref=GenBank:WP_002210789.1;Name=WP_002210789.1;Ontology_term=GO:0015716,GO:0015416,GO:0005886,GO:0055052;gbkey=CDS;gene=phnE;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ABC-type phosphonate transporter activity|0015416||IEA;go_process=organic phosphonate transport|0015716||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304354.1;locus_tag=AD853_RS18175;product=phosphonate ABC transporter%2C permease protein PhnE;protein_id=WP_002210789.1;transl_table=11 NZ_CPUY01000027.1 RefSeq gene 11834 12715 . + . ID=gene-AD853_RS18180;Name=phnE;gbkey=Gene;gene=phnE;gene_biotype=protein_coding;locus_tag=AD853_RS18180;old_locus_tag=ERS008462_03666 NZ_CPUY01000027.1 Protein Homology CDS 11834 12715 . + 0 ID=cds-WP_002210790.1;Parent=gene-AD853_RS18180;Dbxref=GenBank:WP_002210790.1;Name=WP_002210790.1;Ontology_term=GO:0015716,GO:0015416,GO:0005886,GO:0055052;gbkey=CDS;gene=phnE;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ABC-type phosphonate transporter activity|0015416||IEA;go_process=organic phosphonate transport|0015716||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210790.1;locus_tag=AD853_RS18180;product=phosphonate ABC transporter%2C permease protein PhnE;protein_id=WP_002210790.1;transl_table=11 NZ_CPUY01000027.1 RefSeq gene 12960 13433 . + . ID=gene-AD853_RS18185;Name=AD853_RS18185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS18185;old_locus_tag=ERS008462_03667 NZ_CPUY01000027.1 Protein Homology CDS 12960 13433 . + 0 ID=cds-WP_002210791.1;Parent=gene-AD853_RS18185;Dbxref=GenBank:WP_002210791.1;Name=WP_002210791.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011171781.1;locus_tag=AD853_RS18185;product=YehS family protein;protein_id=WP_002210791.1;transl_table=11 NZ_CPUY01000027.1 RefSeq gene 13867 15135 . + . ID=gene-AD853_RS18190;Name=urtA;gbkey=Gene;gene=urtA;gene_biotype=protein_coding;locus_tag=AD853_RS18190;old_locus_tag=ERS008462_03668 NZ_CPUY01000027.1 Protein Homology CDS 13867 15135 . + 0 ID=cds-WP_002210792.1;Parent=gene-AD853_RS18190;Dbxref=GenBank:WP_002210792.1;Name=WP_002210792.1;Ontology_term=GO:0015840,GO:0033219,GO:0033221,GO:0030288,GO:0055052;gbkey=CDS;gene=urtA;go_component=outer membrane-bounded periplasmic space|0030288||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=urea binding|0033219||IEA,ATPase-coupled urea transmembrane transporter activity|0033221||IEA;go_process=urea transport|0015840||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210792.1;locus_tag=AD853_RS18190;product=urea ABC transporter substrate-binding protein;protein_id=WP_002210792.1;transl_table=11 NZ_CPUY01000027.1 RefSeq gene 15259 16860 . + . ID=gene-AD853_RS18195;Name=urtB;gbkey=Gene;gene=urtB;gene_biotype=protein_coding;locus_tag=AD853_RS18195;old_locus_tag=ERS008462_03669 NZ_CPUY01000027.1 Protein Homology CDS 15259 16860 . + 0 ID=cds-WP_002210793.1;Parent=gene-AD853_RS18195;Dbxref=GenBank:WP_002210793.1;Name=WP_002210793.1;Ontology_term=GO:0015840,GO:0033221,GO:0005886,GO:0055052;gbkey=CDS;gene=urtB;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled urea transmembrane transporter activity|0033221||IEA;go_process=urea transport|0015840||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014609102.1;locus_tag=AD853_RS18195;product=urea ABC transporter permease subunit UrtB;protein_id=WP_002210793.1;transl_table=11 NZ_CPUY01000027.1 RefSeq gene 16860 17936 . + . ID=gene-AD853_RS18200;Name=urtC;gbkey=Gene;gene=urtC;gene_biotype=protein_coding;locus_tag=AD853_RS18200;old_locus_tag=ERS008462_03670 NZ_CPUY01000027.1 Protein Homology CDS 16860 17936 . + 0 ID=cds-WP_038824141.1;Parent=gene-AD853_RS18200;Dbxref=GenBank:WP_038824141.1;Name=WP_038824141.1;Ontology_term=GO:0015840,GO:0033221,GO:0005886,GO:0055052;gbkey=CDS;gene=urtC;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled urea transmembrane transporter activity|0033221||IEA;go_process=urea transport|0015840||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105459.1;locus_tag=AD853_RS18200;product=urea ABC transporter permease subunit UrtC;protein_id=WP_038824141.1;transl_table=11 NZ_CPUY01000027.1 RefSeq gene 17933 18769 . + . ID=gene-AD853_RS18205;Name=urtD;gbkey=Gene;gene=urtD;gene_biotype=protein_coding;locus_tag=AD853_RS18205;old_locus_tag=ERS008462_03671 NZ_CPUY01000027.1 Protein Homology CDS 17933 18769 . + 0 ID=cds-WP_038824140.1;Parent=gene-AD853_RS18205;Dbxref=GenBank:WP_038824140.1;Name=WP_038824140.1;Ontology_term=GO:0015840,GO:0005524,GO:0033221,GO:0009898,GO:0055052;gbkey=CDS;gene=urtD;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled urea transmembrane transporter activity|0033221||IEA;go_process=urea transport|0015840||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005158844.1;locus_tag=AD853_RS18205;product=urea ABC transporter ATP-binding protein UrtD;protein_id=WP_038824140.1;transl_table=11 NZ_CPUY01000027.1 RefSeq gene 18863 19558 . + . ID=gene-AD853_RS18210;Name=urtE;gbkey=Gene;gene=urtE;gene_biotype=protein_coding;locus_tag=AD853_RS18210;old_locus_tag=ERS008462_03672 NZ_CPUY01000027.1 Protein Homology CDS 18863 19558 . + 0 ID=cds-WP_038824139.1;Parent=gene-AD853_RS18210;Dbxref=GenBank:WP_038824139.1;Name=WP_038824139.1;Ontology_term=GO:0015840,GO:0005524,GO:0033221,GO:0009898,GO:0055052;gbkey=CDS;gene=urtE;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled urea transmembrane transporter activity|0033221||IEA;go_process=urea transport|0015840||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002223523.1;locus_tag=AD853_RS18210;product=urea ABC transporter ATP-binding subunit UrtE;protein_id=WP_038824139.1;transl_table=11 NZ_CPUY01000027.1 RefSeq gene 19673 20530 . + . ID=gene-AD853_RS18215;Name=AD853_RS18215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS18215;old_locus_tag=ERS008462_03673 NZ_CPUY01000027.1 Protein Homology CDS 19673 20530 . + 0 ID=cds-WP_038824138.1;Parent=gene-AD853_RS18215;Dbxref=GenBank:WP_038824138.1;Name=WP_038824138.1;Ontology_term=GO:0008198,GO:0016705;gbkey=CDS;go_function=ferrous iron binding|0008198||IEA,oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen|0016705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105458.1;locus_tag=AD853_RS18215;product=2OG-Fe(II) oxygenase;protein_id=WP_038824138.1;transl_table=11 NZ_CPUY01000027.1 RefSeq gene 20554 21969 . + . ID=gene-AD853_RS18220;Name=AD853_RS18220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS18220;old_locus_tag=ERS008462_03674 NZ_CPUY01000027.1 Protein Homology CDS 20554 21969 . + 0 ID=cds-WP_038824137.1;Parent=gene-AD853_RS18220;Dbxref=GenBank:WP_038824137.1;Name=WP_038824137.1;Ontology_term=GO:0019752,GO:0016830,GO:0030170;gbkey=CDS;go_function=carbon-carbon lyase activity|0016830||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=carboxylic acid metabolic process|0019752||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210798.1;locus_tag=AD853_RS18220;product=pyridoxal phosphate-dependent decarboxylase family protein;protein_id=WP_038824137.1;transl_table=11 NZ_CPUY01000027.1 RefSeq pseudogene 22082 22926 . - . ID=gene-AD853_RS18225;Name=sseA;gbkey=Gene;gene=sseA;gene_biotype=pseudogene;locus_tag=AD853_RS18225;old_locus_tag=ERS008462_03676;pseudo=true NZ_CPUY01000027.1 Protein Homology CDS 22082 22926 . - 0 ID=cds-AD853_RS18225;Parent=gene-AD853_RS18225;Note=frameshifted;Ontology_term=GO:0004792;gbkey=CDS;gene=sseA;go_function=thiosulfate-cyanide sulfurtransferase activity|0004792||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210799.1;locus_tag=AD853_RS18225;product=3-mercaptopyruvate sulfurtransferase;pseudo=true;transl_table=11 NZ_CPUY01000027.1 RefSeq gene 23662 24594 . + . ID=gene-AD853_RS18230;Name=osmF;gbkey=Gene;gene=osmF;gene_biotype=protein_coding;locus_tag=AD853_RS18230;old_locus_tag=ERS008462_03677 NZ_CPUY01000027.1 Protein Homology CDS 23662 24594 . + 0 ID=cds-WP_011191984.1;Parent=gene-AD853_RS18230;Dbxref=GenBank:WP_011191984.1;Name=WP_011191984.1;Ontology_term=GO:0031460,GO:0022857;gbkey=CDS;gene=osmF;go_function=transmembrane transporter activity|0022857||IEA;go_process=glycine betaine transport|0031460||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011191984.1;locus_tag=AD853_RS18230;product=glycine betaine ABC transporter substrate-binding protein OsmF;protein_id=WP_011191984.1;transl_table=11 NZ_CPUY01000027.1 RefSeq gene 24821 25975 . + . ID=gene-AD853_RS18235;Name=AD853_RS18235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS18235;old_locus_tag=ERS008462_03678 NZ_CPUY01000027.1 Protein Homology CDS 24821 25975 . + 0 ID=cds-WP_002210801.1;Parent=gene-AD853_RS18235;Dbxref=GenBank:WP_002210801.1;Name=WP_002210801.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210801.1;locus_tag=AD853_RS18235;product=ABC transporter permease;protein_id=WP_002210801.1;transl_table=11 NZ_CPUY01000027.1 RefSeq gene 25972 26910 . + . ID=gene-AD853_RS18240;Name=AD853_RS18240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS18240;old_locus_tag=ERS008462_03679 NZ_CPUY01000027.1 Protein Homology CDS 25972 26910 . + 0 ID=cds-WP_012105454.1;Parent=gene-AD853_RS18240;Dbxref=GenBank:WP_012105454.1;Name=WP_012105454.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105454.1;locus_tag=AD853_RS18240;product=ABC transporter ATP-binding protein;protein_id=WP_012105454.1;transl_table=11 NZ_CPUY01000027.1 RefSeq gene 27045 27743 . + . ID=gene-AD853_RS18245;Name=AD853_RS18245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS18245;old_locus_tag=ERS008462_03680 NZ_CPUY01000027.1 Protein Homology CDS 27045 27743 . + 0 ID=cds-WP_002353933.1;Parent=gene-AD853_RS18245;Dbxref=GenBank:WP_002353933.1;Name=WP_002353933.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002353933.1;locus_tag=AD853_RS18245;product=ABC transporter permease;protein_id=WP_002353933.1;transl_table=11 NZ_CPUY01000027.1 RefSeq gene 28197 29531 . + . ID=gene-AD853_RS18250;Name=adiC;gbkey=Gene;gene=adiC;gene_biotype=protein_coding;locus_tag=AD853_RS18250;old_locus_tag=ERS008462_03681 NZ_CPUY01000027.1 Protein Homology CDS 28197 29531 . + 0 ID=cds-WP_038825590.1;Parent=gene-AD853_RS18250;Dbxref=GenBank:WP_038825590.1;Name=WP_038825590.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=adiC;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016674029.1;locus_tag=AD853_RS18250;product=arginine/agmatine antiporter;protein_id=WP_038825590.1;transl_table=11 NZ_CPUY01000027.1 RefSeq gene 29601 31907 . + . ID=gene-AD853_RS18255;Name=AD853_RS18255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS18255;old_locus_tag=ERS008462_03682 NZ_CPUY01000027.1 Protein Homology CDS 29601 31907 . + 0 ID=cds-WP_011191987.1;Parent=gene-AD853_RS18255;Dbxref=GenBank:WP_011191987.1;Name=WP_011191987.1;Ontology_term=GO:0016831;gbkey=CDS;go_function=carboxy-lyase activity|0016831||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011191987.1;locus_tag=AD853_RS18255;product=Orn/Lys/Arg family decarboxylase;protein_id=WP_011191987.1;transl_table=11 NZ_CPUY01000027.1 RefSeq gene 32025 32243 . - . ID=gene-AD853_RS18260;Name=AD853_RS18260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS18260;old_locus_tag=ERS008462_03683 NZ_CPUY01000027.1 Protein Homology CDS 32025 32243 . - 0 ID=cds-WP_050124651.1;Parent=gene-AD853_RS18260;Dbxref=GenBank:WP_050124651.1;Name=WP_050124651.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210806.1;locus_tag=AD853_RS18260;product=hypothetical protein;protein_id=WP_050124651.1;transl_table=11 NZ_CPUY01000027.1 RefSeq gene 32368 33258 . - . ID=gene-AD853_RS18265;Name=yedA;gbkey=Gene;gene=yedA;gene_biotype=protein_coding;locus_tag=AD853_RS18265;old_locus_tag=ERS008462_03684 NZ_CPUY01000027.1 Protein Homology CDS 32368 33258 . - 0 ID=cds-WP_011191989.1;Parent=gene-AD853_RS18265;Dbxref=GenBank:WP_011191989.1;Name=WP_011191989.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yedA;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210807.1;locus_tag=AD853_RS18265;product=drug/metabolite exporter YedA;protein_id=WP_011191989.1;transl_table=11 NZ_CPUY01000027.1 RefSeq gene 33670 34785 . - . ID=gene-AD853_RS18275;Name=ompF2;gbkey=Gene;gene=ompF2;gene_biotype=protein_coding;locus_tag=AD853_RS18275;old_locus_tag=ERS008462_03685 NZ_CPUY01000027.1 Protein Homology CDS 33670 34785 . - 0 ID=cds-WP_038824134.1;Parent=gene-AD853_RS18275;Dbxref=GenBank:WP_038824134.1;Name=WP_038824134.1;gbkey=CDS;gene=ompF2;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005158804.1;locus_tag=AD853_RS18275;product=porin OmpF2;protein_id=WP_038824134.1;transl_table=11 NZ_CPUY01000027.1 RefSeq gene 35055 37235 . + . ID=gene-AD853_RS18280;Name=dinG;gbkey=Gene;gene=dinG;gene_biotype=protein_coding;locus_tag=AD853_RS18280;old_locus_tag=ERS008462_03686 NZ_CPUY01000027.1 Protein Homology CDS 35055 37235 . + 0 ID=cds-WP_011191991.1;Parent=gene-AD853_RS18280;Dbxref=GenBank:WP_011191991.1;Name=WP_011191991.1;Ontology_term=GO:0006139,GO:0003677,GO:0003678,GO:0005524,GO:0016818;gbkey=CDS;gene=dinG;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA,hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210810.1;locus_tag=AD853_RS18280;product=ATP-dependent DNA helicase DinG;protein_id=WP_011191991.1;transl_table=11 NZ_CPUY01000027.1 RefSeq gene 37303 38742 . - . ID=gene-AD853_RS18285;Name=katA;gbkey=Gene;gene=katA;gene_biotype=protein_coding;locus_tag=AD853_RS18285;old_locus_tag=ERS008462_03687 NZ_CPUY01000027.1 Protein Homology CDS 37303 38742 . - 0 ID=cds-WP_002210811.1;Parent=gene-AD853_RS18285;Dbxref=GenBank:WP_002210811.1;Name=WP_002210811.1;gbkey=CDS;gene=katA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210811.1;locus_tag=AD853_RS18285;product=catalase KatA;protein_id=WP_002210811.1;transl_table=11 NZ_CPUY01000027.1 RefSeq gene 39103 39645 . + . ID=gene-AD853_RS18290;Name=AD853_RS18290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS18290;old_locus_tag=ERS008462_03688 NZ_CPUY01000027.1 Protein Homology CDS 39103 39645 . + 0 ID=cds-WP_002210812.1;Parent=gene-AD853_RS18290;Dbxref=GenBank:WP_002210812.1;Name=WP_002210812.1;Ontology_term=GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210812.1;locus_tag=AD853_RS18290;product=YfaZ family protein;protein_id=WP_002210812.1;transl_table=11 ##sequence-region NZ_CPUY01000028.1 1 39708 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=633 NZ_CPUY01000028.1 RefSeq region 1 39708 . + . ID=NZ_CPUY01000028.1:1..39708;Dbxref=taxon:633;collection-date=1900/2008;country=South Africa;gbkey=Src;genome=genomic;isolation-source=not known;mol_type=genomic DNA;nat-host=pig;serovar=O:3;strain=IP32544 NZ_CPUY01000028.1 RefSeq gene 59 135 . - . ID=gene-AD853_RS18295;Name=AD853_RS18295;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD853_RS18295;old_locus_tag=ERS008462_03689 NZ_CPUY01000028.1 tRNAscan-SE tRNA 59 135 . - . ID=rna-AD853_RS18295;Parent=gene-AD853_RS18295;anticodon=(pos:complement(99..101));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD853_RS18295;product=tRNA-Pro NZ_CPUY01000028.1 tRNAscan-SE exon 59 135 . - . ID=exon-AD853_RS18295-1;Parent=rna-AD853_RS18295;anticodon=(pos:complement(99..101));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD853_RS18295;product=tRNA-Pro NZ_CPUY01000028.1 RefSeq gene 252 1583 . - . ID=gene-AD853_RS18300;Name=uhpC;gbkey=Gene;gene=uhpC;gene_biotype=protein_coding;locus_tag=AD853_RS18300;old_locus_tag=ERS008462_03690 NZ_CPUY01000028.1 Protein Homology CDS 252 1583 . - 0 ID=cds-WP_038824862.1;Parent=gene-AD853_RS18300;Dbxref=GenBank:WP_038824862.1;Name=WP_038824862.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=uhpC;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015683791.1;locus_tag=AD853_RS18300;product=MFS transporter;protein_id=WP_038824862.1;transl_table=11 NZ_CPUY01000028.1 RefSeq gene 1678 3207 . - . ID=gene-AD853_RS18305;Name=uhpB;gbkey=Gene;gene=uhpB;gene_biotype=protein_coding;locus_tag=AD853_RS18305;old_locus_tag=ERS008462_03691 NZ_CPUY01000028.1 Protein Homology CDS 1678 3207 . - 0 ID=cds-WP_002230402.1;Parent=gene-AD853_RS18305;Dbxref=GenBank:WP_002230402.1;Name=WP_002230402.1;Ontology_term=GO:0000160,GO:0000155;gbkey=CDS;gene=uhpB;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019081398.1;locus_tag=AD853_RS18305;product=signal transduction histidine-protein kinase/phosphatase UhpB;protein_id=WP_002230402.1;transl_table=11 NZ_CPUY01000028.1 RefSeq gene 3204 3794 . - . ID=gene-AD853_RS18310;Name=uhpA;gbkey=Gene;gene=uhpA;gene_biotype=protein_coding;locus_tag=AD853_RS18310;old_locus_tag=ERS008462_03692 NZ_CPUY01000028.1 Protein Homology CDS 3204 3794 . - 0 ID=cds-WP_012303350.1;Parent=gene-AD853_RS18310;Dbxref=GenBank:WP_012303350.1;Name=WP_012303350.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=uhpA;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012303350.1;locus_tag=AD853_RS18310;product=transcriptional regulator UhpA;protein_id=WP_012303350.1;transl_table=11 NZ_CPUY01000028.1 RefSeq gene 3910 5601 . - . ID=gene-AD853_RS18315;Name=eptB;gbkey=Gene;gene=eptB;gene_biotype=protein_coding;locus_tag=AD853_RS18315;old_locus_tag=ERS008462_03693 NZ_CPUY01000028.1 Protein Homology CDS 3910 5601 . - 0 ID=cds-WP_002209571.1;Parent=gene-AD853_RS18315;Dbxref=GenBank:WP_002209571.1;Name=WP_002209571.1;Ontology_term=GO:0008484;gbkey=CDS;gene=eptB;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002220725.1;locus_tag=AD853_RS18315;product=kdo(2)-lipid A phosphoethanolamine 7''-transferase;protein_id=WP_002209571.1;transl_table=11 NZ_CPUY01000028.1 RefSeq gene 6130 7611 . - . ID=gene-AD853_RS18320;Name=AD853_RS18320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS18320;old_locus_tag=ERS008462_03694 NZ_CPUY01000028.1 Protein Homology CDS 6130 7611 . - 0 ID=cds-WP_050124652.1;Parent=gene-AD853_RS18320;Dbxref=GenBank:WP_050124652.1;Name=WP_050124652.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209573.1;locus_tag=AD853_RS18320;product=alpha/beta hydrolase;protein_id=WP_050124652.1;transl_table=11 NZ_CPUY01000028.1 RefSeq gene 8079 9482 . - . ID=gene-AD853_RS18325;Name=AD853_RS18325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS18325;old_locus_tag=ERS008462_03695 NZ_CPUY01000028.1 Protein Homology CDS 8079 9482 . - 0 ID=cds-WP_002214368.1;Parent=gene-AD853_RS18325;Dbxref=GenBank:WP_002214368.1;Name=WP_002214368.1;Ontology_term=GO:0006865,GO:0055085,GO:0015171,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002429843.1;locus_tag=AD853_RS18325;product=amino acid permease;protein_id=WP_002214368.1;transl_table=11 NZ_CPUY01000028.1 RefSeq gene 9881 11413 . - . ID=gene-AD853_RS18330;Name=hutH;gbkey=Gene;gene=hutH;gene_biotype=protein_coding;locus_tag=AD853_RS18330;old_locus_tag=ERS008462_03696 NZ_CPUY01000028.1 Protein Homology CDS 9881 11413 . - 0 ID=cds-WP_011193293.1;Parent=gene-AD853_RS18330;Dbxref=GenBank:WP_011193293.1;Name=WP_011193293.1;Ontology_term=GO:0006548,GO:0004397,GO:0005737;gbkey=CDS;gene=hutH;go_component=cytoplasm|0005737||IEA;go_function=histidine ammonia-lyase activity|0004397||IEA;go_process=L-histidine catabolic process|0006548||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105946.1;locus_tag=AD853_RS18330;product=histidine ammonia-lyase;protein_id=WP_011193293.1;transl_table=11 NZ_CPUY01000028.1 RefSeq gene 11410 13101 . - . ID=gene-AD853_RS18335;Name=hutU;gbkey=Gene;gene=hutU;gene_biotype=protein_coding;locus_tag=AD853_RS18335;old_locus_tag=ERS008462_03697 NZ_CPUY01000028.1 Protein Homology CDS 11410 13101 . - 0 ID=cds-WP_038824527.1;Parent=gene-AD853_RS18335;Dbxref=GenBank:WP_038824527.1;Name=WP_038824527.1;Ontology_term=GO:0006548,GO:0016153;gbkey=CDS;gene=hutU;go_function=urocanate hydratase activity|0016153||IEA;go_process=L-histidine catabolic process|0006548||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002355586.1;locus_tag=AD853_RS18335;product=urocanate hydratase;protein_id=WP_038824527.1;transl_table=11 NZ_CPUY01000028.1 RefSeq gene 13828 14772 . + . ID=gene-AD853_RS18340;Name=AD853_RS18340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS18340;old_locus_tag=ERS008462_03698 NZ_CPUY01000028.1 Protein Homology CDS 13828 14772 . + 0 ID=cds-WP_002209577.1;Parent=gene-AD853_RS18340;Dbxref=GenBank:WP_002209577.1;Name=WP_002209577.1;Ontology_term=GO:0006535,GO:0016765;gbkey=CDS;go_function=transferase activity%2C transferring alkyl or aryl (other than methyl) groups|0016765||IEA;go_process=cysteine biosynthetic process from serine|0006535||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209577.1;locus_tag=AD853_RS18340;product=cysteine synthase family protein;protein_id=WP_002209577.1;transl_table=11 NZ_CPUY01000028.1 RefSeq gene 14769 15335 . + . ID=gene-AD853_RS18345;Name=AD853_RS18345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS18345;old_locus_tag=ERS008462_03699 NZ_CPUY01000028.1 Protein Homology CDS 14769 15335 . + 0 ID=cds-WP_002209578.1;Parent=gene-AD853_RS18345;Dbxref=GenBank:WP_002209578.1;Name=WP_002209578.1;Ontology_term=GO:0009116;gbkey=CDS;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209578.1;locus_tag=AD853_RS18345;product=phosphoribosyltransferase family protein;protein_id=WP_002209578.1;transl_table=11 NZ_CPUY01000028.1 RefSeq gene 15418 16347 . + . ID=gene-AD853_RS18350;Name=AD853_RS18350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS18350;old_locus_tag=ERS008462_03700 NZ_CPUY01000028.1 Protein Homology CDS 15418 16347 . + 0 ID=cds-WP_038400735.1;Parent=gene-AD853_RS18350;Dbxref=GenBank:WP_038400735.1;Name=WP_038400735.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012303347.1;locus_tag=AD853_RS18350;product=EamA family transporter;protein_id=WP_038400735.1;transl_table=11 NZ_CPUY01000028.1 RefSeq gene 16349 17593 . + . ID=gene-AD853_RS18355;Name=AD853_RS18355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS18355;old_locus_tag=ERS008462_03701 NZ_CPUY01000028.1 Protein Homology CDS 16349 17593 . + 0 ID=cds-WP_038825542.1;Parent=gene-AD853_RS18355;Dbxref=GenBank:WP_038825542.1;Name=WP_038825542.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209580.1;locus_tag=AD853_RS18355;product=ATP-grasp domain-containing protein;protein_id=WP_038825542.1;transl_table=11 NZ_CPUY01000028.1 RefSeq gene 18116 19069 . + . ID=gene-AD853_RS18360;Name=AD853_RS18360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS18360;old_locus_tag=ERS008462_03702 NZ_CPUY01000028.1 Protein Homology CDS 18116 19069 . + 0 ID=cds-WP_002209581.1;Parent=gene-AD853_RS18360;Dbxref=GenBank:WP_002209581.1;Name=WP_002209581.1;Ontology_term=GO:0005524,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209581.1;locus_tag=AD853_RS18360;product=siderophore ABC transporter substrate-binding protein;protein_id=WP_002209581.1;transl_table=11 NZ_CPUY01000028.1 RefSeq gene 19079 20038 . + . ID=gene-AD853_RS18365;Name=AD853_RS18365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS18365;old_locus_tag=ERS008462_03703 NZ_CPUY01000028.1 Protein Homology CDS 19079 20038 . + 0 ID=cds-WP_038824374.1;Parent=gene-AD853_RS18365;Dbxref=GenBank:WP_038824374.1;Name=WP_038824374.1;Ontology_term=GO:0006826,GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=iron ion transport|0006826||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011817160.1;locus_tag=AD853_RS18365;product=ABC transporter permease;protein_id=WP_038824374.1;transl_table=11 NZ_CPUY01000028.1 RefSeq gene 20028 21035 . + . ID=gene-AD853_RS18370;Name=AD853_RS18370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS18370;old_locus_tag=ERS008462_03704 NZ_CPUY01000028.1 Protein Homology CDS 20028 21035 . + 0 ID=cds-WP_038824373.1;Parent=gene-AD853_RS18370;Dbxref=GenBank:WP_038824373.1;Name=WP_038824373.1;Ontology_term=GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209583.1;locus_tag=AD853_RS18370;product=iron chelate uptake ABC transporter family permease subunit;protein_id=WP_038824373.1;transl_table=11 NZ_CPUY01000028.1 RefSeq gene 21032 21790 . + . ID=gene-AD853_RS18375;Name=AD853_RS18375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS18375;old_locus_tag=ERS008462_03705 NZ_CPUY01000028.1 Protein Homology CDS 21032 21790 . + 0 ID=cds-WP_011193297.1;Parent=gene-AD853_RS18375;Dbxref=GenBank:WP_011193297.1;Name=WP_011193297.1;Ontology_term=GO:0006826,GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=iron ion transport|0006826||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005157194.1;locus_tag=AD853_RS18375;product=iron ABC transporter ATP-binding protein;protein_id=WP_011193297.1;transl_table=11 NZ_CPUY01000028.1 RefSeq pseudogene 21802 22555 . - . ID=gene-AD853_RS22345;Name=rhuM;gbkey=Gene;gene=rhuM;gene_biotype=pseudogene;locus_tag=AD853_RS22345;partial=true;pseudo=true;start_range=.,21802 NZ_CPUY01000028.1 Protein Homology CDS 21802 22555 . - 0 ID=cds-AD853_RS22345;Parent=gene-AD853_RS22345;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;gene=rhuM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462654.1;locus_tag=AD853_RS22345;partial=true;product=RhuM family protein;pseudo=true;start_range=.,21802;transl_table=11 NZ_CPUY01000028.1 RefSeq gene 22578 22985 . - . ID=gene-AD853_RS18390;Name=AD853_RS18390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS18390;old_locus_tag=ERS008462_03708 NZ_CPUY01000028.1 Protein Homology CDS 22578 22985 . - 0 ID=cds-WP_011193299.1;Parent=gene-AD853_RS18390;Dbxref=GenBank:WP_011193299.1;Name=WP_011193299.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005158289.1;locus_tag=AD853_RS18390;product=DUF6088 family protein;protein_id=WP_011193299.1;transl_table=11 NZ_CPUY01000028.1 RefSeq pseudogene 23286 23492 . - . ID=gene-AD853_RS21105;Name=AD853_RS21105;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD853_RS21105;old_locus_tag=ERS008462_03709;partial=true;pseudo=true;start_range=.,23286 NZ_CPUY01000028.1 Protein Homology CDS 23286 23492 . - 0 ID=cds-AD853_RS21105;Parent=gene-AD853_RS21105;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015683793.1;locus_tag=AD853_RS21105;partial=true;product=Arm DNA-binding domain-containing protein;pseudo=true;start_range=.,23286;transl_table=11 NZ_CPUY01000028.1 RefSeq gene 23654 23748 . - . ID=gene-AD853_RS21665;Name=AD853_RS21665;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD853_RS21665;old_locus_tag=ERS008462_03710 NZ_CPUY01000028.1 tRNAscan-SE tRNA 23654 23748 . - . ID=rna-AD853_RS21665;Parent=gene-AD853_RS21665;anticodon=(pos:complement(23712..23714));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD853_RS21665;product=tRNA-Sec NZ_CPUY01000028.1 tRNAscan-SE exon 23654 23748 . - . ID=exon-AD853_RS21665-1;Parent=rna-AD853_RS21665;anticodon=(pos:complement(23712..23714));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD853_RS21665;product=tRNA-Sec NZ_CPUY01000028.1 RefSeq gene 23878 25071 . - . ID=gene-AD853_RS18395;Name=xylR;gbkey=Gene;gene=xylR;gene_biotype=protein_coding;locus_tag=AD853_RS18395;old_locus_tag=ERS008462_03711 NZ_CPUY01000028.1 Protein Homology CDS 23878 25071 . - 0 ID=cds-WP_038824513.1;Parent=gene-AD853_RS18395;Dbxref=GenBank:WP_038824513.1;Name=WP_038824513.1;Note=D-xylose enhances binding of XylR to the xyl promoter and activates transcription.;gbkey=CDS;gene=xylR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019081419.1;locus_tag=AD853_RS18395;product=D-xylose utilization transcriptional activator XylR;protein_id=WP_038824513.1;transl_table=11 NZ_CPUY01000028.1 RefSeq gene 25161 26345 . - . ID=gene-AD853_RS18400;Name=xylH;gbkey=Gene;gene=xylH;gene_biotype=protein_coding;locus_tag=AD853_RS18400;old_locus_tag=ERS008462_03712 NZ_CPUY01000028.1 Protein Homology CDS 25161 26345 . - 0 ID=cds-WP_002209589.1;Parent=gene-AD853_RS18400;Dbxref=GenBank:WP_002209589.1;Name=WP_002209589.1;gbkey=CDS;gene=xylH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209589.1;locus_tag=AD853_RS18400;product=xylose ABC transporter permease XylH;protein_id=WP_002209589.1;transl_table=11 NZ_CPUY01000028.1 RefSeq gene 26332 27864 . - . ID=gene-AD853_RS18405;Name=AD853_RS18405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS18405;old_locus_tag=ERS008462_03713 NZ_CPUY01000028.1 Protein Homology CDS 26332 27864 . - 0 ID=cds-WP_038824512.1;Parent=gene-AD853_RS18405;Dbxref=GenBank:WP_038824512.1;Name=WP_038824512.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105953.1;locus_tag=AD853_RS18405;product=xylose ABC transporter ATP-binding protein;protein_id=WP_038824512.1;transl_table=11 NZ_CPUY01000028.1 RefSeq gene 28072 29067 . - . ID=gene-AD853_RS18410;Name=xylF;gbkey=Gene;gene=xylF;gene_biotype=protein_coding;locus_tag=AD853_RS18410;old_locus_tag=ERS008462_03714 NZ_CPUY01000028.1 Protein Homology CDS 28072 29067 . - 0 ID=cds-WP_038824511.1;Parent=gene-AD853_RS18410;Dbxref=GenBank:WP_038824511.1;Name=WP_038824511.1;Ontology_term=GO:0015753;gbkey=CDS;gene=xylF;go_process=D-xylose transmembrane transport|0015753||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004391154.1;locus_tag=AD853_RS18410;product=D-xylose ABC transporter substrate-binding protein;protein_id=WP_038824511.1;transl_table=11 NZ_CPUY01000028.1 RefSeq gene 29530 30849 . + . ID=gene-AD853_RS18415;Name=xylA;gbkey=Gene;gene=xylA;gene_biotype=protein_coding;locus_tag=AD853_RS18415;old_locus_tag=ERS008462_03715 NZ_CPUY01000028.1 Protein Homology CDS 29530 30849 . + 0 ID=cds-WP_002209593.1;Parent=gene-AD853_RS18415;Dbxref=GenBank:WP_002209593.1;Name=WP_002209593.1;Ontology_term=GO:0042732,GO:0009045;gbkey=CDS;gene=xylA;go_function=xylose isomerase activity|0009045||IEA;go_process=D-xylose metabolic process|0042732||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006322931.1;locus_tag=AD853_RS18415;product=xylose isomerase;protein_id=WP_002209593.1;transl_table=11 NZ_CPUY01000028.1 RefSeq gene 30973 32427 . + . ID=gene-AD853_RS18420;Name=xylB;gbkey=Gene;gene=xylB;gene_biotype=protein_coding;locus_tag=AD853_RS18420;old_locus_tag=ERS008462_03716 NZ_CPUY01000028.1 Protein Homology CDS 30973 32427 . + 0 ID=cds-WP_050124653.1;Parent=gene-AD853_RS18420;Dbxref=GenBank:WP_050124653.1;Name=WP_050124653.1;Ontology_term=GO:0005997,GO:0004856;gbkey=CDS;gene=xylB;go_function=D-xylulokinase activity|0004856||IEA;go_process=xylulose metabolic process|0005997||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012303337.1;locus_tag=AD853_RS18420;product=xylulokinase;protein_id=WP_050124653.1;transl_table=11 NZ_CPUY01000028.1 RefSeq gene 32507 33493 . - . ID=gene-AD853_RS18425;Name=AD853_RS18425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS18425;old_locus_tag=ERS008462_03717 NZ_CPUY01000028.1 Protein Homology CDS 32507 33493 . - 0 ID=cds-WP_050124654.1;Parent=gene-AD853_RS18425;Dbxref=GenBank:WP_050124654.1;Name=WP_050124654.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012303336.1;locus_tag=AD853_RS18425;product=fimbrial protein;protein_id=WP_050124654.1;transl_table=11 NZ_CPUY01000028.1 RefSeq gene 33532 34299 . - . ID=gene-AD853_RS18430;Name=AD853_RS18430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS18430;old_locus_tag=ERS008462_03718 NZ_CPUY01000028.1 Protein Homology CDS 33532 34299 . - 0 ID=cds-WP_012303335.1;Parent=gene-AD853_RS18430;Dbxref=GenBank:WP_012303335.1;Name=WP_012303335.1;Ontology_term=GO:0006457,GO:0043711,GO:0030288;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_process=protein folding|0006457||IEA,pilus organization|0043711||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209596.1;locus_tag=AD853_RS18430;product=fimbrial biogenesis chaperone;protein_id=WP_012303335.1;transl_table=11 NZ_CPUY01000028.1 RefSeq gene 34392 36884 . - . ID=gene-AD853_RS18435;Name=AD853_RS18435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS18435;old_locus_tag=ERS008462_03719 NZ_CPUY01000028.1 Protein Homology CDS 34392 36884 . - 0 ID=cds-WP_012105957.1;Parent=gene-AD853_RS18435;Dbxref=GenBank:WP_012105957.1;Name=WP_012105957.1;Ontology_term=GO:0009297,GO:0015473,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=fimbrial usher porin activity|0015473||IEA;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105957.1;locus_tag=AD853_RS18435;product=fimbria/pilus outer membrane usher protein;protein_id=WP_012105957.1;transl_table=11 NZ_CPUY01000028.1 RefSeq gene 36960 37517 . - . ID=gene-AD853_RS18440;Name=AD853_RS18440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS18440;old_locus_tag=ERS008462_03720 NZ_CPUY01000028.1 Protein Homology CDS 36960 37517 . - 0 ID=cds-WP_050124655.1;Parent=gene-AD853_RS18440;Dbxref=GenBank:WP_050124655.1;Name=WP_050124655.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209597.1;locus_tag=AD853_RS18440;product=fimbrial protein;protein_id=WP_050124655.1;transl_table=11 NZ_CPUY01000028.1 RefSeq gene 38399 39391 . - . ID=gene-AD853_RS18445;Name=AD853_RS18445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS18445;old_locus_tag=ERS008462_03721 NZ_CPUY01000028.1 Protein Homology CDS 38399 39391 . - 0 ID=cds-WP_002209600.1;Parent=gene-AD853_RS18445;Dbxref=GenBank:WP_002209600.1;Name=WP_002209600.1;Ontology_term=GO:0016413,GO:0016747;gbkey=CDS;go_function=O-acetyltransferase activity|0016413||IEA,acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004874981.1;locus_tag=AD853_RS18445;product=acyltransferase;protein_id=WP_002209600.1;transl_table=11 NZ_CPUY01000028.1 RefSeq gene 39418 39609 . - . ID=gene-AD853_RS21115;Name=AD853_RS21115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS21115 NZ_CPUY01000028.1 Protein Homology CDS 39418 39609 . - 0 ID=cds-WP_038825248.1;Parent=gene-AD853_RS21115;Dbxref=GenBank:WP_038825248.1;Name=WP_038825248.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209601.1;locus_tag=AD853_RS21115;product=hypothetical protein;protein_id=WP_038825248.1;transl_table=11 ##sequence-region NZ_CPUY01000029.1 1 35981 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=633 NZ_CPUY01000029.1 RefSeq region 1 35981 . + . ID=NZ_CPUY01000029.1:1..35981;Dbxref=taxon:633;collection-date=1900/2008;country=South Africa;gbkey=Src;genome=genomic;isolation-source=not known;mol_type=genomic DNA;nat-host=pig;serovar=O:3;strain=IP32544 NZ_CPUY01000029.1 RefSeq gene 228 512 . - . ID=gene-AD853_RS18450;Name=ihfB;gbkey=Gene;gene=ihfB;gene_biotype=protein_coding;locus_tag=AD853_RS18450;old_locus_tag=ERS008462_03723 NZ_CPUY01000029.1 Protein Homology CDS 228 512 . - 0 ID=cds-WP_002211322.1;Parent=gene-AD853_RS18450;Dbxref=GenBank:WP_002211322.1;Name=WP_002211322.1;Ontology_term=GO:0006310,GO:0006355,GO:0006417,GO:0075713,GO:0003677,GO:0005694;gbkey=CDS;gene=ihfB;go_component=chromosome|0005694||IEA;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,regulation of DNA-templated transcription|0006355||IEA,regulation of translation|0006417||IEA,establishment of integrated proviral latency|0075713||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309022.1;locus_tag=AD853_RS18450;product=integration host factor subunit beta;protein_id=WP_002211322.1;transl_table=11 NZ_CPUY01000029.1 RefSeq gene 573 2246 . - . ID=gene-AD853_RS18455;Name=rpsA;gbkey=Gene;gene=rpsA;gene_biotype=protein_coding;locus_tag=AD853_RS18455;old_locus_tag=ERS008462_03724 NZ_CPUY01000029.1 Protein Homology CDS 573 2246 . - 0 ID=cds-WP_011192057.1;Parent=gene-AD853_RS18455;Dbxref=GenBank:WP_011192057.1;Name=WP_011192057.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsA;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123560.1;locus_tag=AD853_RS18455;product=30S ribosomal protein S1;protein_id=WP_011192057.1;transl_table=11 NZ_CPUY01000029.1 RefSeq gene 2420 3112 . - . ID=gene-AD853_RS18460;Name=cmk;gbkey=Gene;gene=cmk;gene_biotype=protein_coding;locus_tag=AD853_RS18460;old_locus_tag=ERS008462_03725 NZ_CPUY01000029.1 Protein Homology CDS 2420 3112 . - 0 ID=cds-WP_002211324.1;Parent=gene-AD853_RS18460;Dbxref=GenBank:WP_002211324.1;Name=WP_002211324.1;Ontology_term=GO:0015949,GO:0005524,GO:0036431;gbkey=CDS;gene=cmk;go_function=ATP binding|0005524||IEA,dCMP kinase activity|0036431||IEA;go_process=nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005159905.1;locus_tag=AD853_RS18460;product=(d)CMP kinase;protein_id=WP_002211324.1;transl_table=11 NZ_CPUY01000029.1 RefSeq gene 3425 4711 . - . ID=gene-AD853_RS18465;Name=aroA;gbkey=Gene;gene=aroA;gene_biotype=protein_coding;locus_tag=AD853_RS18465;old_locus_tag=ERS008462_03726 NZ_CPUY01000029.1 Protein Homology CDS 3425 4711 . - 0 ID=cds-WP_050124656.1;Parent=gene-AD853_RS18465;Dbxref=GenBank:WP_050124656.1;Name=WP_050124656.1;Ontology_term=GO:0009073,GO:0003866;gbkey=CDS;gene=aroA;go_function=3-phosphoshikimate 1-carboxyvinyltransferase activity|0003866||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016605332.1;locus_tag=AD853_RS18465;product=3-phosphoshikimate 1-carboxyvinyltransferase;protein_id=WP_050124656.1;transl_table=11 NZ_CPUY01000029.1 RefSeq gene 4889 5974 . - . ID=gene-AD853_RS18470;Name=serC;gbkey=Gene;gene=serC;gene_biotype=protein_coding;locus_tag=AD853_RS18470;old_locus_tag=ERS008462_03727 NZ_CPUY01000029.1 Protein Homology CDS 4889 5974 . - 0 ID=cds-WP_038825135.1;Parent=gene-AD853_RS18470;Dbxref=GenBank:WP_038825135.1;Name=WP_038825135.1;Ontology_term=GO:0006564,GO:0003824,GO:0004648;gbkey=CDS;gene=serC;go_function=catalytic activity|0003824||IEA,O-phospho-L-serine:2-oxoglutarate aminotransferase activity|0004648||IEA;go_process=L-serine biosynthetic process|0006564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004710028.1;locus_tag=AD853_RS18470;product=3-phosphoserine/phosphohydroxythreonine transaminase;protein_id=WP_038825135.1;transl_table=11 NZ_CPUY01000029.1 RefSeq gene 6341 8188 . - . ID=gene-AD853_RS18475;Name=AD853_RS18475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS18475;old_locus_tag=ERS008462_03728 NZ_CPUY01000029.1 Protein Homology CDS 6341 8188 . - 0 ID=cds-WP_038825138.1;Parent=gene-AD853_RS18475;Dbxref=GenBank:WP_038825138.1;Name=WP_038825138.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012413605.1;locus_tag=AD853_RS18475;product=YadA-like family protein;protein_id=WP_038825138.1;transl_table=11 NZ_CPUY01000029.1 RefSeq gene 8200 9294 . - . ID=gene-AD853_RS18480;Name=AD853_RS18480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS18480;old_locus_tag=ERS008462_03729 NZ_CPUY01000029.1 Protein Homology CDS 8200 9294 . - 0 ID=cds-WP_038825134.1;Parent=gene-AD853_RS18480;Dbxref=GenBank:WP_038825134.1;Name=WP_038825134.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105384.1;locus_tag=AD853_RS18480;product=YadA-like family protein;protein_id=WP_038825134.1;transl_table=11 NZ_CPUY01000029.1 RefSeq gene 9613 10650 . - . ID=gene-AD853_RS18485;Name=ansB;gbkey=Gene;gene=ansB;gene_biotype=protein_coding;locus_tag=AD853_RS18485;old_locus_tag=ERS008462_03730 NZ_CPUY01000029.1 Protein Homology CDS 9613 10650 . - 0 ID=cds-WP_011192052.1;Parent=gene-AD853_RS18485;Dbxref=GenBank:WP_011192052.1;Name=WP_011192052.1;Ontology_term=GO:0006528,GO:0004067;gbkey=CDS;gene=ansB;go_function=asparaginase activity|0004067||IEA;go_process=asparagine metabolic process|0006528||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192052.1;locus_tag=AD853_RS18485;product=L-asparaginase 2;protein_id=WP_011192052.1;transl_table=11 NZ_CPUY01000029.1 RefSeq gene 10799 12565 . + . ID=gene-AD853_RS18490;Name=ycaO;gbkey=Gene;gene=ycaO;gene_biotype=protein_coding;locus_tag=AD853_RS18490;old_locus_tag=ERS008462_03731 NZ_CPUY01000029.1 Protein Homology CDS 10799 12565 . + 0 ID=cds-WP_002211330.1;Parent=gene-AD853_RS18490;Dbxref=GenBank:WP_002211330.1;Name=WP_002211330.1;gbkey=CDS;gene=ycaO;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019083454.1;locus_tag=AD853_RS18490;product=30S ribosomal protein S12 methylthiotransferase accessory factor YcaO;protein_id=WP_002211330.1;transl_table=11 NZ_CPUY01000029.1 RefSeq gene 13242 14099 . + . ID=gene-AD853_RS18495;Name=focA;gbkey=Gene;gene=focA;gene_biotype=protein_coding;locus_tag=AD853_RS18495;old_locus_tag=ERS008462_03732 NZ_CPUY01000029.1 Protein Homology CDS 13242 14099 . + 0 ID=cds-WP_002211331.1;Parent=gene-AD853_RS18495;Dbxref=GenBank:WP_002211331.1;Name=WP_002211331.1;gbkey=CDS;gene=focA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211331.1;locus_tag=AD853_RS18495;product=formate transporter FocA;protein_id=WP_002211331.1;transl_table=11 NZ_CPUY01000029.1 RefSeq gene 14155 16437 . + . ID=gene-AD853_RS18500;Name=pflB;gbkey=Gene;gene=pflB;gene_biotype=protein_coding;locus_tag=AD853_RS18500;old_locus_tag=ERS008462_03733 NZ_CPUY01000029.1 Protein Homology CDS 14155 16437 . + 0 ID=cds-WP_002211332.1;Parent=gene-AD853_RS18500;Dbxref=GenBank:WP_002211332.1;Name=WP_002211332.1;Ontology_term=GO:0005975,GO:0008861,GO:0005737;gbkey=CDS;gene=pflB;go_component=cytoplasm|0005737||IEA;go_function=formate C-acetyltransferase activity|0008861||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415423.1;locus_tag=AD853_RS18500;product=formate C-acetyltransferase;protein_id=WP_002211332.1;transl_table=11 NZ_CPUY01000029.1 RefSeq gene 16555 17229 . - . ID=gene-AD853_RS18505;Name=AD853_RS18505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS18505;old_locus_tag=ERS008462_03734 NZ_CPUY01000029.1 Protein Homology CDS 16555 17229 . - 0 ID=cds-WP_002211333.1;Parent=gene-AD853_RS18505;Dbxref=GenBank:WP_002211333.1;Name=WP_002211333.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211333.1;locus_tag=AD853_RS18505;product=glycosyltransferase family 25 protein;protein_id=WP_002211333.1;transl_table=11 NZ_CPUY01000029.1 RefSeq gene 18216 18950 . + . ID=gene-AD853_RS18510;Name=pflA;gbkey=Gene;gene=pflA;gene_biotype=protein_coding;locus_tag=AD853_RS18510;old_locus_tag=ERS008462_03735 NZ_CPUY01000029.1 Protein Homology CDS 18216 18950 . + 0 ID=cds-WP_038400022.1;Parent=gene-AD853_RS18510;Dbxref=GenBank:WP_038400022.1;Name=WP_038400022.1;Ontology_term=GO:0043365,GO:0051539;gbkey=CDS;gene=pflA;go_function=[formate-C-acetyltransferase]-activating enzyme activity|0043365||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211334.1;locus_tag=AD853_RS18510;product=pyruvate formate lyase 1-activating protein;protein_id=WP_038400022.1;transl_table=11 NZ_CPUY01000029.1 RefSeq gene 19104 20252 . - . ID=gene-AD853_RS18515;Name=AD853_RS18515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS18515;old_locus_tag=ERS008462_03736 NZ_CPUY01000029.1 Protein Homology CDS 19104 20252 . - 0 ID=cds-WP_038824097.1;Parent=gene-AD853_RS18515;Dbxref=GenBank:WP_038824097.1;Name=WP_038824097.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005171044.1;locus_tag=AD853_RS18515;product=MFS transporter;protein_id=WP_038824097.1;transl_table=11 NZ_CPUY01000029.1 RefSeq gene 20475 21767 . - . ID=gene-AD853_RS18520;Name=serS;gbkey=Gene;gene=serS;gene_biotype=protein_coding;locus_tag=AD853_RS18520;old_locus_tag=ERS008462_03737 NZ_CPUY01000029.1 Protein Homology CDS 20475 21767 . - 0 ID=cds-WP_038824099.1;Parent=gene-AD853_RS18520;Dbxref=GenBank:WP_038824099.1;Name=WP_038824099.1;Ontology_term=GO:0006434,GO:0000166,GO:0004828,GO:0005524;gbkey=CDS;gene=serS;go_function=nucleotide binding|0000166||IEA,serine-tRNA ligase activity|0004828||IEA,ATP binding|0005524||IEA;go_process=seryl-tRNA aminoacylation|0006434||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012006116.1;locus_tag=AD853_RS18520;product=serine--tRNA ligase;protein_id=WP_038824099.1;transl_table=11 NZ_CPUY01000029.1 RefSeq gene 22009 23352 . - . ID=gene-AD853_RS18525;Name=AD853_RS18525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS18525;old_locus_tag=ERS008462_03738 NZ_CPUY01000029.1 Protein Homology CDS 22009 23352 . - 0 ID=cds-WP_002228009.1;Parent=gene-AD853_RS18525;Dbxref=GenBank:WP_002228009.1;Name=WP_002228009.1;Ontology_term=GO:0006260,GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226103.1;locus_tag=AD853_RS18525;product=replication-associated recombination protein A;protein_id=WP_002228009.1;transl_table=11 NZ_CPUY01000029.1 RefSeq gene 23363 23971 . - . ID=gene-AD853_RS18530;Name=lolA;gbkey=Gene;gene=lolA;gene_biotype=protein_coding;locus_tag=AD853_RS18530;old_locus_tag=ERS008462_03739 NZ_CPUY01000029.1 Protein Homology CDS 23363 23971 . - 0 ID=cds-WP_002211338.1;Parent=gene-AD853_RS18530;Dbxref=GenBank:WP_002211338.1;Name=WP_002211338.1;Ontology_term=GO:0042953,GO:0042597;gbkey=CDS;gene=lolA;go_component=periplasmic space|0042597||IEA;go_process=lipoprotein transport|0042953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211338.1;locus_tag=AD853_RS18530;product=outer membrane lipoprotein periplasmic chaperone LolA;protein_id=WP_002211338.1;transl_table=11 NZ_CPUY01000029.1 RefSeq gene 24161 28069 . - . ID=gene-AD853_RS18535;Name=AD853_RS18535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS18535;old_locus_tag=ERS008462_03740 NZ_CPUY01000029.1 Protein Homology CDS 24161 28069 . - 0 ID=cds-WP_038831729.1;Parent=gene-AD853_RS18535;Dbxref=GenBank:WP_038831729.1;Name=WP_038831729.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016678505.1;locus_tag=AD853_RS18535;product=DNA translocase FtsK;protein_id=WP_038831729.1;transl_table=11 NZ_CPUY01000029.1 RefSeq gene 28192 28686 . - . ID=gene-AD853_RS18540;Name=lrp;gbkey=Gene;gene=lrp;gene_biotype=protein_coding;locus_tag=AD853_RS18540;old_locus_tag=ERS008462_03741 NZ_CPUY01000029.1 Protein Homology CDS 28192 28686 . - 0 ID=cds-WP_002211340.1;Parent=gene-AD853_RS18540;Dbxref=GenBank:WP_002211340.1;Name=WP_002211340.1;gbkey=CDS;gene=lrp;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459935.1;locus_tag=AD853_RS18540;product=leucine-responsive transcriptional regulator Lrp;protein_id=WP_002211340.1;transl_table=11 NZ_CPUY01000029.1 RefSeq gene 29454 30416 . + . ID=gene-AD853_RS18545;Name=trxB;gbkey=Gene;gene=trxB;gene_biotype=protein_coding;locus_tag=AD853_RS18545;old_locus_tag=ERS008462_03742 NZ_CPUY01000029.1 Protein Homology CDS 29454 30416 . + 0 ID=cds-WP_002211341.1;Parent=gene-AD853_RS18545;Dbxref=GenBank:WP_002211341.1;Name=WP_002211341.1;Ontology_term=GO:0019430,GO:0004791;gbkey=CDS;gene=trxB;go_function=thioredoxin-disulfide reductase (NADPH) activity|0004791||IEA;go_process=removal of superoxide radicals|0019430||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004713343.1;locus_tag=AD853_RS18545;product=thioredoxin-disulfide reductase;protein_id=WP_002211341.1;transl_table=11 NZ_CPUY01000029.1 RefSeq gene 30875 32641 . + . ID=gene-AD853_RS18555;Name=cydD;gbkey=Gene;gene=cydD;gene_biotype=protein_coding;locus_tag=AD853_RS18555;old_locus_tag=ERS008462_03743 NZ_CPUY01000029.1 Protein Homology CDS 30875 32641 . + 0 ID=cds-WP_002217690.1;Parent=gene-AD853_RS18555;Dbxref=GenBank:WP_002217690.1;Name=WP_002217690.1;Ontology_term=GO:0005524,GO:0140359,GO:0016020;gbkey=CDS;gene=cydD;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105386.1;locus_tag=AD853_RS18555;product=heme ABC transporter permease/ATP-binding protein CydD;protein_id=WP_002217690.1;transl_table=11 NZ_CPUY01000029.1 RefSeq gene 32644 34368 . + . ID=gene-AD853_RS18560;Name=cydC;gbkey=Gene;gene=cydC;gene_biotype=protein_coding;locus_tag=AD853_RS18560;old_locus_tag=ERS008462_03744 NZ_CPUY01000029.1 Protein Homology CDS 32644 34368 . + 0 ID=cds-WP_038824101.1;Parent=gene-AD853_RS18560;Dbxref=GenBank:WP_038824101.1;Name=WP_038824101.1;Ontology_term=GO:0045454,GO:0005524,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;gene=cydC;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019083457.1;locus_tag=AD853_RS18560;product=heme ABC transporter ATP-binding protein/permease CydC;protein_id=WP_038824101.1;transl_table=11 NZ_CPUY01000029.1 RefSeq gene 34587 35297 . + . ID=gene-AD853_RS18565;Name=aat;gbkey=Gene;gene=aat;gene_biotype=protein_coding;locus_tag=AD853_RS18565;old_locus_tag=ERS008462_03745 NZ_CPUY01000029.1 Protein Homology CDS 34587 35297 . + 0 ID=cds-WP_002211346.1;Parent=gene-AD853_RS18565;Dbxref=GenBank:WP_002211346.1;Name=WP_002211346.1;Ontology_term=GO:0006508,GO:0008914;gbkey=CDS;gene=aat;go_function=leucyl-tRNA--protein transferase activity|0008914||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211346.1;locus_tag=AD853_RS18565;product=leucyl/phenylalanyl-tRNA--protein transferase;protein_id=WP_002211346.1;transl_table=11 NZ_CPUY01000029.1 RefSeq gene 35463 35681 . + . ID=gene-AD853_RS18570;Name=infA;gbkey=Gene;gene=infA;gene_biotype=protein_coding;locus_tag=AD853_RS18570;old_locus_tag=ERS008462_03746 NZ_CPUY01000029.1 Protein Homology CDS 35463 35681 . + 0 ID=cds-WP_002211347.1;Parent=gene-AD853_RS18570;Dbxref=GenBank:WP_002211347.1;Name=WP_002211347.1;Ontology_term=GO:0006413,GO:0003743;gbkey=CDS;gene=infA;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001040186.1;locus_tag=AD853_RS18570;product=translation initiation factor IF-1;protein_id=WP_002211347.1;transl_table=11 ##sequence-region NZ_CPUY01000030.1 1 32765 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=633 NZ_CPUY01000030.1 RefSeq region 1 32765 . + . ID=NZ_CPUY01000030.1:1..32765;Dbxref=taxon:633;collection-date=1900/2008;country=South Africa;gbkey=Src;genome=genomic;isolation-source=not known;mol_type=genomic DNA;nat-host=pig;serovar=O:3;strain=IP32544 NZ_CPUY01000030.1 RefSeq gene 190 1767 . - . ID=gene-AD853_RS18580;Name=AD853_RS18580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS18580;old_locus_tag=ERS008462_03747 NZ_CPUY01000030.1 Protein Homology CDS 190 1767 . - 0 ID=cds-WP_001323889.1;Parent=gene-AD853_RS18580;Dbxref=GenBank:WP_001323889.1;Name=WP_001323889.1;Ontology_term=GO:0006935,GO:0007165,GO:0004888,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane signaling receptor activity|0004888||IEA;go_process=chemotaxis|0006935||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001513488.1;locus_tag=AD853_RS18580;product=methyl-accepting chemotaxis protein;protein_id=WP_001323889.1;transl_table=11 NZ_CPUY01000030.1 RefSeq gene 2077 2637 . + . ID=gene-AD853_RS18585;Name=AD853_RS18585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS18585;old_locus_tag=ERS008462_03748 NZ_CPUY01000030.1 Protein Homology CDS 2077 2637 . + 0 ID=cds-WP_050124657.1;Parent=gene-AD853_RS18585;Dbxref=GenBank:WP_050124657.1;Name=WP_050124657.1;Ontology_term=GO:0006310,GO:0015074,GO:0000150,GO:0003677;gbkey=CDS;go_function=DNA strand exchange activity|0000150||IEA,DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000147566.1;locus_tag=AD853_RS18585;product=recombinase family protein;protein_id=WP_050124657.1;transl_table=11 NZ_CPUY01000030.1 RefSeq gene 2641 5607 . + . ID=gene-AD853_RS18590;Name=AD853_RS18590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS18590;old_locus_tag=ERS008462_03749 NZ_CPUY01000030.1 Protein Homology CDS 2641 5607 . + 0 ID=cds-WP_001138014.1;Parent=gene-AD853_RS18590;Dbxref=GenBank:WP_001138014.1;Name=WP_001138014.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001138014.1;locus_tag=AD853_RS18590;product=Tn3-like element TnAs1 family transposase;protein_id=WP_001138014.1;transl_table=11 NZ_CPUY01000030.1 RefSeq pseudogene 5637 6287 . - . ID=gene-AD853_RS18595;Name=AD853_RS18595;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD853_RS18595;old_locus_tag=ERS008462_03750;partial=true;pseudo=true;start_range=.,5637 NZ_CPUY01000030.1 Protein Homology CDS 5637 6287 . - 0 ID=cds-AD853_RS18595;Parent=gene-AD853_RS18595;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_032495017.1;locus_tag=AD853_RS18595;partial=true;product=DUF4158 domain-containing protein;pseudo=true;start_range=.,5637;transl_table=11 NZ_CPUY01000030.1 RefSeq gene 6451 7008 . + . ID=gene-AD853_RS18600;Name=AD853_RS18600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS18600;old_locus_tag=ERS008462_03751 NZ_CPUY01000030.1 Protein Homology CDS 6451 7008 . + 0 ID=cds-WP_001235713.1;Parent=gene-AD853_RS18600;Dbxref=GenBank:WP_001235713.1;Name=WP_001235713.1;Ontology_term=GO:0006310,GO:0015074,GO:0000150,GO:0003677;gbkey=CDS;go_function=DNA strand exchange activity|0000150||IEA,DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005687610.1;locus_tag=AD853_RS18600;product=recombinase family protein;protein_id=WP_001235713.1;transl_table=11 NZ_CPUY01000030.1 RefSeq gene 7191 8051 . + . ID=gene-AD853_RS18605;Name=AD853_RS18605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS18605;old_locus_tag=ERS008462_03752 NZ_CPUY01000030.1 Protein Homology CDS 7191 8051 . + 0 ID=cds-WP_000027057.1;Parent=gene-AD853_RS18605;Dbxref=GenBank:WP_000027057.1;Name=WP_000027057.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_032489893.1;locus_tag=AD853_RS18605;product=broad-spectrum class A beta-lactamase TEM-1;protein_id=WP_000027057.1;transl_table=11 NZ_CPUY01000030.1 RefSeq gene 8211 8606 . + . ID=gene-AD853_RS22545;Name=AD853_RS22545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS22545 NZ_CPUY01000030.1 Protein Homology CDS 8211 8606 . + 0 ID=cds-WP_306766596.1;Parent=gene-AD853_RS22545;Dbxref=GenBank:WP_306766596.1;Name=WP_306766596.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF042748.4;locus_tag=AD853_RS22545;product=DUF6710 family protein;protein_id=WP_306766596.1;transl_table=11 NZ_CPUY01000030.1 RefSeq gene 8780 9313 . - . ID=gene-AD853_RS18615;Name=AD853_RS18615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS18615;old_locus_tag=ERS008462_03753 NZ_CPUY01000030.1 Protein Homology CDS 8780 9313 . - 0 ID=cds-WP_000731968.1;Parent=gene-AD853_RS18615;Dbxref=GenBank:WP_000731968.1;Name=WP_000731968.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000731969.1;locus_tag=AD853_RS18615;product=phospholipase D family nuclease;protein_id=WP_000731968.1;transl_table=11 NZ_CPUY01000030.1 RefSeq gene 9313 10308 . - . ID=gene-AD853_RS18620;Name=AD853_RS18620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS18620;old_locus_tag=ERS008462_03754 NZ_CPUY01000030.1 Protein Homology CDS 9313 10308 . - 0 ID=cds-WP_000128596.1;Parent=gene-AD853_RS18620;Dbxref=GenBank:WP_000128596.1;Name=WP_000128596.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000128596.1;locus_tag=AD853_RS18620;product=ATPase%2C T2SS/T4P/T4SS family;protein_id=WP_000128596.1;transl_table=11 NZ_CPUY01000030.1 RefSeq gene 10350 11510 . - . ID=gene-AD853_RS18625;Name=virB10;gbkey=Gene;gene=virB10;gene_biotype=protein_coding;locus_tag=AD853_RS18625;old_locus_tag=ERS008462_03755 NZ_CPUY01000030.1 Protein Homology CDS 10350 11510 . - 0 ID=cds-WP_000101711.1;Parent=gene-AD853_RS18625;Dbxref=GenBank:WP_000101711.1;Name=WP_000101711.1;gbkey=CDS;gene=virB10;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000101711.1;locus_tag=AD853_RS18625;product=type IV secretion system protein VirB10;protein_id=WP_000101711.1;transl_table=11 NZ_CPUY01000030.1 RefSeq gene 11510 12394 . - . ID=gene-AD853_RS18630;Name=AD853_RS18630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS18630;old_locus_tag=ERS008462_03756 NZ_CPUY01000030.1 Protein Homology CDS 11510 12394 . - 0 ID=cds-WP_000735067.1;Parent=gene-AD853_RS18630;Dbxref=GenBank:WP_000735067.1;Name=WP_000735067.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000735066.1;locus_tag=AD853_RS18630;product=TrbG/VirB9 family P-type conjugative transfer protein;protein_id=WP_000735067.1;transl_table=11 NZ_CPUY01000030.1 RefSeq gene 12405 13103 . - . ID=gene-AD853_RS18635;Name=AD853_RS18635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS18635;old_locus_tag=ERS008462_03757 NZ_CPUY01000030.1 Protein Homology CDS 12405 13103 . - 0 ID=cds-WP_000646594.1;Parent=gene-AD853_RS18635;Dbxref=GenBank:WP_000646594.1;Name=WP_000646594.1;Ontology_term=GO:0030255;gbkey=CDS;go_process=protein secretion by the type IV secretion system|0030255||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004216210.1;locus_tag=AD853_RS18635;product=VirB8 family type IV secretion system protein;protein_id=WP_000646594.1;transl_table=11 NZ_CPUY01000030.1 RefSeq gene 13093 13251 . - . ID=gene-AD853_RS22550;Name=AD853_RS22550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS22550 NZ_CPUY01000030.1 Protein Homology CDS 13093 13251 . - 0 ID=cds-WP_012561180.1;Parent=gene-AD853_RS22550;Dbxref=GenBank:WP_012561180.1;Name=WP_012561180.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF044342.3;locus_tag=AD853_RS22550;product=hypothetical protein;protein_id=WP_012561180.1;transl_table=11 NZ_CPUY01000030.1 RefSeq gene 13322 14362 . - . ID=gene-AD853_RS18645;Name=AD853_RS18645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS18645;old_locus_tag=ERS008462_03758 NZ_CPUY01000030.1 Protein Homology CDS 13322 14362 . - 0 ID=cds-WP_000886022.1;Parent=gene-AD853_RS18645;Dbxref=GenBank:WP_000886022.1;Name=WP_000886022.1;Ontology_term=GO:0030255;gbkey=CDS;go_process=protein secretion by the type IV secretion system|0030255||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001749958.1;locus_tag=AD853_RS18645;product=TrbL/VirB6 family protein;protein_id=WP_000886022.1;transl_table=11 NZ_CPUY01000030.1 RefSeq gene 14378 14605 . - . ID=gene-AD853_RS18650;Name=eexN;gbkey=Gene;gene=eexN;gene_biotype=protein_coding;locus_tag=AD853_RS18650;old_locus_tag=ERS008462_03759 NZ_CPUY01000030.1 Protein Homology CDS 14378 14605 . - 0 ID=cds-WP_000734973.1;Parent=gene-AD853_RS18650;Dbxref=GenBank:WP_000734973.1;Name=WP_000734973.1;gbkey=CDS;gene=eexN;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000734973.1;locus_tag=AD853_RS18650;product=IncN-type entry exclusion lipoprotein EexN;protein_id=WP_000734973.1;transl_table=11 NZ_CPUY01000030.1 RefSeq gene 14613 15326 . - . ID=gene-AD853_RS18655;Name=AD853_RS18655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS18655;old_locus_tag=ERS008462_03760 NZ_CPUY01000030.1 Protein Homology CDS 14613 15326 . - 0 ID=cds-WP_000749362.1;Parent=gene-AD853_RS18655;Dbxref=GenBank:WP_000749362.1;Name=WP_000749362.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001749960.1;locus_tag=AD853_RS18655;product=TrbJ/VirB5 family protein;protein_id=WP_000749362.1;transl_table=11 NZ_CPUY01000030.1 RefSeq gene 15344 17944 . - . ID=gene-AD853_RS18660;Name=AD853_RS18660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS18660;old_locus_tag=ERS008462_03761 NZ_CPUY01000030.1 Protein Homology CDS 15344 17944 . - 0 ID=cds-WP_001200711.1;Parent=gene-AD853_RS18660;Dbxref=GenBank:WP_001200711.1;Name=WP_001200711.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012561149.1;locus_tag=AD853_RS18660;product=VirB4 family type IV secretion/conjugal transfer ATPase;protein_id=WP_001200711.1;transl_table=11 NZ_CPUY01000030.1 RefSeq gene 17944 18261 . - . ID=gene-AD853_RS18665;Name=AD853_RS18665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS18665;old_locus_tag=ERS008462_03762 NZ_CPUY01000030.1 Protein Homology CDS 17944 18261 . - 0 ID=cds-WP_000496058.1;Parent=gene-AD853_RS18665;Dbxref=GenBank:WP_000496058.1;Name=WP_000496058.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000496058.1;locus_tag=AD853_RS18665;product=VirB3 family type IV secretion system protein;protein_id=WP_000496058.1;transl_table=11 NZ_CPUY01000030.1 RefSeq gene 18311 18604 . - . ID=gene-AD853_RS18670;Name=AD853_RS18670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS18670;old_locus_tag=ERS008462_03763 NZ_CPUY01000030.1 Protein Homology CDS 18311 18604 . - 0 ID=cds-WP_000209137.1;Parent=gene-AD853_RS18670;Dbxref=GenBank:WP_000209137.1;Name=WP_000209137.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001749962.1;locus_tag=AD853_RS18670;product=TrbC/VirB2 family protein;protein_id=WP_000209137.1;transl_table=11 NZ_CPUY01000030.1 RefSeq gene 18614 18895 . - . ID=gene-AD853_RS18675;Name=korA;gbkey=Gene;gene=korA;gene_biotype=protein_coding;locus_tag=AD853_RS18675;old_locus_tag=ERS008462_03764 NZ_CPUY01000030.1 Protein Homology CDS 18614 18895 . - 0 ID=cds-WP_000440698.1;Parent=gene-AD853_RS18675;Dbxref=GenBank:WP_000440698.1;Name=WP_000440698.1;gbkey=CDS;gene=korA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000440698.1;locus_tag=AD853_RS18675;product=transcriptional repressor KorA;protein_id=WP_000440698.1;transl_table=11 NZ_CPUY01000030.1 RefSeq gene 18904 19638 . - . ID=gene-AD853_RS18680;Name=AD853_RS18680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS18680;old_locus_tag=ERS008462_03765 NZ_CPUY01000030.1 Protein Homology CDS 18904 19638 . - 0 ID=cds-WP_000033783.1;Parent=gene-AD853_RS18680;Dbxref=GenBank:WP_000033783.1;Name=WP_000033783.1;Ontology_term=GO:0043684;gbkey=CDS;go_component=type IV secretion system complex|0043684||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001749963.1;locus_tag=AD853_RS18680;product=lytic transglycosylase domain-containing protein;protein_id=WP_000033783.1;transl_table=11 NZ_CPUY01000030.1 RefSeq gene 19747 20052 . + . ID=gene-AD853_RS18685;Name=AD853_RS18685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS18685;old_locus_tag=ERS008462_03766 NZ_CPUY01000030.1 Protein Homology CDS 19747 20052 . + 0 ID=cds-WP_000960954.1;Parent=gene-AD853_RS18685;Dbxref=GenBank:WP_000960954.1;Name=WP_000960954.1;Ontology_term=GO:0006355,GO:0003677,GO:0030527;gbkey=CDS;go_function=DNA binding|0003677||IEA,structural constituent of chromatin|0030527||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000960954.1;locus_tag=AD853_RS18685;product=H-NS family nucleoid-associated regulatory protein;protein_id=WP_000960954.1;transl_table=11 NZ_CPUY01000030.1 RefSeq gene 20068 20445 . + . ID=gene-AD853_RS18690;Name=AD853_RS18690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS18690;old_locus_tag=ERS008462_03767 NZ_CPUY01000030.1 Protein Homology CDS 20068 20445 . + 0 ID=cds-WP_000504251.1;Parent=gene-AD853_RS18690;Dbxref=GenBank:WP_000504251.1;Name=WP_000504251.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000504251.1;locus_tag=AD853_RS18690;product=hypothetical protein;protein_id=WP_000504251.1;transl_table=11 NZ_CPUY01000030.1 RefSeq gene 20408 20722 . + . ID=gene-AD853_RS18695;Name=AD853_RS18695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS18695;old_locus_tag=ERS008462_03768 NZ_CPUY01000030.1 Protein Homology CDS 20408 20722 . + 0 ID=cds-WP_000734776.1;Parent=gene-AD853_RS18695;Dbxref=GenBank:WP_000734776.1;Name=WP_000734776.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001749965.1;locus_tag=AD853_RS18695;product=TrbM/KikA/MpfK family conjugal transfer protein;protein_id=WP_000734776.1;transl_table=11 NZ_CPUY01000030.1 RefSeq gene 20758 21069 . + . ID=gene-AD853_RS18700;Name=AD853_RS18700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS18700;old_locus_tag=ERS008462_03769 NZ_CPUY01000030.1 Protein Homology CDS 20758 21069 . + 0 ID=cds-WP_001452736.1;Parent=gene-AD853_RS18700;Dbxref=GenBank:WP_001452736.1;Name=WP_001452736.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001452736.1;locus_tag=AD853_RS18700;product=hypothetical protein;protein_id=WP_001452736.1;transl_table=11 NZ_CPUY01000030.1 RefSeq gene 21195 22031 . - . ID=gene-AD853_RS18705;Name=AD853_RS18705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS18705;old_locus_tag=ERS008462_03770 NZ_CPUY01000030.1 Protein Homology CDS 21195 22031 . - 0 ID=cds-WP_000480968.1;Parent=gene-AD853_RS18705;Dbxref=GenBank:WP_000480968.1;Name=WP_000480968.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000480972.1;locus_tag=AD853_RS18705;product=aminoglycoside O-phosphotransferase APH(6)-Id;protein_id=WP_000480968.1;transl_table=11 NZ_CPUY01000030.1 RefSeq gene 22031 22834 . - . ID=gene-AD853_RS18710;Name=aph(3'')-Ib;gbkey=Gene;gene=aph(3'')-Ib;gene_biotype=protein_coding;locus_tag=AD853_RS18710;old_locus_tag=ERS008462_03771 NZ_CPUY01000030.1 Protein Homology CDS 22031 22834 . - 0 ID=cds-WP_001082319.1;Parent=gene-AD853_RS18710;Dbxref=GenBank:WP_001082319.1;Name=WP_001082319.1;gbkey=CDS;gene=aph(3'')-Ib;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010890156.1;locus_tag=AD853_RS18710;product=aminoglycoside O-phosphotransferase APH(3'')-Ib;protein_id=WP_001082319.1;transl_table=11 NZ_CPUY01000030.1 RefSeq gene 22966 24095 . - . ID=gene-AD853_RS18715;Name=AD853_RS18715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS18715;old_locus_tag=ERS008462_03772 NZ_CPUY01000030.1 Protein Homology CDS 23849 24095 . - 0 ID=cds-WP_085959879.1;Parent=gene-AD853_RS18715;Dbxref=GenBank:WP_085959879.1;Name=WP_085959879.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611355.1;locus_tag=AD853_RS18715;product=IS3-like element IS1133 family transposase;protein_id=WP_085959879.1;transl_table=11 NZ_CPUY01000030.1 Protein Homology CDS 22966 23849 . - 2 ID=cds-WP_085959879.1;Parent=gene-AD853_RS18715;Dbxref=GenBank:WP_085959879.1;Name=WP_085959879.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611355.1;locus_tag=AD853_RS18715;product=IS3-like element IS1133 family transposase;protein_id=WP_085959879.1;transl_table=11 NZ_CPUY01000030.1 RefSeq gene 24126 24749 . - . ID=gene-AD853_RS18725;Name=AD853_RS18725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS18725;old_locus_tag=ERS008462_03774 NZ_CPUY01000030.1 Protein Homology CDS 24126 24749 . - 0 ID=cds-WP_000904897.1;Parent=gene-AD853_RS18725;Dbxref=GenBank:WP_000904897.1;Name=WP_000904897.1;Ontology_term=GO:0006310,GO:0015074,GO:0000150,GO:0003677;gbkey=CDS;go_function=DNA strand exchange activity|0000150||IEA,DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000904896.1;locus_tag=AD853_RS18725;product=recombinase family protein;protein_id=WP_000904897.1;transl_table=11 NZ_CPUY01000030.1 RefSeq gene 24875 27760 . + . ID=gene-AD853_RS18730;Name=AD853_RS18730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS18730;old_locus_tag=ERS008462_03775 NZ_CPUY01000030.1 Protein Homology CDS 24875 27760 . + 0 ID=cds-WP_001138082.1;Parent=gene-AD853_RS18730;Dbxref=GenBank:WP_001138082.1;Name=WP_001138082.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612398.1;locus_tag=AD853_RS18730;product=Tn3 family transposase;protein_id=WP_001138082.1;transl_table=11 NZ_CPUY01000030.1 RefSeq gene 27967 28476 . + . ID=gene-AD853_RS18735;Name=AD853_RS18735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS18735;old_locus_tag=ERS008462_03776 NZ_CPUY01000030.1 Protein Homology CDS 27967 28476 . + 0 ID=cds-WP_000893479.1;Parent=gene-AD853_RS18735;Dbxref=GenBank:WP_000893479.1;Name=WP_000893479.1;Ontology_term=GO:0003677,GO:0004519;gbkey=CDS;go_function=DNA binding|0003677||IEA,endonuclease activity|0004519||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000893479.1;locus_tag=AD853_RS18735;product=restriction endonuclease;protein_id=WP_000893479.1;transl_table=11 NZ_CPUY01000030.1 RefSeq gene 28481 28678 . + . ID=gene-AD853_RS18740;Name=AD853_RS18740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS18740;old_locus_tag=ERS008462_03777 NZ_CPUY01000030.1 Protein Homology CDS 28481 28678 . + 0 ID=cds-WP_000844102.1;Parent=gene-AD853_RS18740;Dbxref=GenBank:WP_000844102.1;Name=WP_000844102.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000844102.1;locus_tag=AD853_RS18740;product=hypothetical protein;protein_id=WP_000844102.1;transl_table=11 NZ_CPUY01000030.1 RefSeq pseudogene 28698 28970 . - . ID=gene-AD853_RS18745;Name=AD853_RS18745;end_range=28970,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD853_RS18745;partial=true;pseudo=true NZ_CPUY01000030.1 Protein Homology CDS 28698 28970 . - 0 ID=cds-AD853_RS18745;Parent=gene-AD853_RS18745;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=28970,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AD853_RS18745;partial=true;product=IS1 family transposase;pseudo=true;transl_table=11 NZ_CPUY01000030.1 RefSeq gene 29064 30497 . + . ID=gene-AD853_RS18750;Name=AD853_RS18750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS18750;old_locus_tag=ERS008462_03778 NZ_CPUY01000030.1 Protein Homology CDS 29064 30497 . + 0 ID=cds-WP_001288435.1;Parent=gene-AD853_RS18750;Dbxref=GenBank:WP_001288435.1;Name=WP_001288435.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001288433.1;locus_tag=AD853_RS18750;product=DNA cytosine methyltransferase;protein_id=WP_001288435.1;transl_table=11 NZ_CPUY01000030.1 RefSeq gene 30531 31739 . - . ID=gene-AD853_RS18755;Name=AD853_RS18755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS18755;old_locus_tag=ERS008462_03779 NZ_CPUY01000030.1 Protein Homology CDS 30531 31739 . - 0 ID=cds-WP_000110242.1;Parent=gene-AD853_RS18755;Dbxref=GenBank:WP_000110242.1;Name=WP_000110242.1;Ontology_term=GO:0009307,GO:0003677,GO:0009036;gbkey=CDS;go_function=DNA binding|0003677||IEA,type II site-specific deoxyribonuclease activity|0009036||IEA;go_process=DNA restriction-modification system|0009307||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000110242.1;locus_tag=AD853_RS18755;product=type II restriction endonuclease;protein_id=WP_000110242.1;transl_table=11 NZ_CPUY01000030.1 RefSeq gene 31984 32580 . + . ID=gene-AD853_RS18760;Name=AD853_RS18760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS18760;old_locus_tag=ERS008462_03780 NZ_CPUY01000030.1 Protein Homology CDS 31984 32580 . + 0 ID=cds-WP_000583524.1;Parent=gene-AD853_RS18760;Dbxref=GenBank:WP_000583524.1;Name=WP_000583524.1;Ontology_term=GO:0006310,GO:0015074,GO:0000150,GO:0003677;gbkey=CDS;go_function=DNA strand exchange activity|0000150||IEA,DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000583524.1;locus_tag=AD853_RS18760;product=recombinase family protein;protein_id=WP_000583524.1;transl_table=11 ##sequence-region NZ_CPUY01000031.1 1 30171 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=633 NZ_CPUY01000031.1 RefSeq region 1 30171 . + . ID=NZ_CPUY01000031.1:1..30171;Dbxref=taxon:633;collection-date=1900/2008;country=South Africa;gbkey=Src;genome=genomic;isolation-source=not known;mol_type=genomic DNA;nat-host=pig;serovar=O:3;strain=IP32544 NZ_CPUY01000031.1 RefSeq gene 542 2131 . + . ID=gene-AD853_RS18765;Name=purH;gbkey=Gene;gene=purH;gene_biotype=protein_coding;locus_tag=AD853_RS18765;old_locus_tag=ERS008462_03781 NZ_CPUY01000031.1 Protein Homology CDS 542 2131 . + 0 ID=cds-WP_050124659.1;Parent=gene-AD853_RS18765;Dbxref=GenBank:WP_050124659.1;Name=WP_050124659.1;Ontology_term=GO:0009152,GO:0003937,GO:0004643;gbkey=CDS;gene=purH;go_function=IMP cyclohydrolase activity|0003937||IEA,phosphoribosylaminoimidazolecarboxamide formyltransferase activity|0004643||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132841.1;locus_tag=AD853_RS18765;product=bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase;protein_id=WP_050124659.1;transl_table=11 NZ_CPUY01000031.1 RefSeq gene 2191 3477 . + . ID=gene-AD853_RS18770;Name=purD;gbkey=Gene;gene=purD;gene_biotype=protein_coding;locus_tag=AD853_RS18770;old_locus_tag=ERS008462_03782 NZ_CPUY01000031.1 Protein Homology CDS 2191 3477 . + 0 ID=cds-WP_038824778.1;Parent=gene-AD853_RS18770;Dbxref=GenBank:WP_038824778.1;Name=WP_038824778.1;Ontology_term=GO:0009113,GO:0004637;gbkey=CDS;gene=purD;go_function=phosphoribosylamine-glycine ligase activity|0004637||IEA;go_process=purine nucleobase biosynthetic process|0009113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004716493.1;locus_tag=AD853_RS18770;product=phosphoribosylamine--glycine ligase;protein_id=WP_038824778.1;transl_table=11 NZ_CPUY01000031.1 RefSeq gene 3625 4278 . - . ID=gene-AD853_RS18775;Name=AD853_RS18775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS18775;old_locus_tag=ERS008462_03783 NZ_CPUY01000031.1 Protein Homology CDS 3625 4278 . - 0 ID=cds-WP_012303442.1;Parent=gene-AD853_RS18775;Dbxref=GenBank:WP_012303442.1;Name=WP_012303442.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002355296.1;locus_tag=AD853_RS18775;product=DUF1481 domain-containing protein;protein_id=WP_012303442.1;transl_table=11 NZ_CPUY01000031.1 RefSeq gene 4328 4603 . - . ID=gene-AD853_RS18780;Name=hupA;gbkey=Gene;gene=hupA;gene_biotype=protein_coding;locus_tag=AD853_RS18780;old_locus_tag=ERS008462_03784 NZ_CPUY01000031.1 Protein Homology CDS 4328 4603 . - 0 ID=cds-WP_002210689.1;Parent=gene-AD853_RS18780;Dbxref=GenBank:WP_002210689.1;Name=WP_002210689.1;gbkey=CDS;gene=hupA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013200312.1;locus_tag=AD853_RS18780;product=nucleoid-associated protein HU-alpha;protein_id=WP_002210689.1;transl_table=11 NZ_CPUY01000031.1 RefSeq gene 4792 5382 . - . ID=gene-AD853_RS18785;Name=AD853_RS18785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS18785;old_locus_tag=ERS008462_03785 NZ_CPUY01000031.1 Protein Homology CDS 4792 5382 . - 0 ID=cds-WP_002230622.1;Parent=gene-AD853_RS18785;Dbxref=GenBank:WP_002230622.1;Name=WP_002230622.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004957783.1;locus_tag=AD853_RS18785;product=YjaG family protein;protein_id=WP_002230622.1;transl_table=11 NZ_CPUY01000031.1 RefSeq gene 5428 6132 . - . ID=gene-AD853_RS18790;Name=nfi;gbkey=Gene;gene=nfi;gene_biotype=protein_coding;locus_tag=AD853_RS18790;old_locus_tag=ERS008462_03786 NZ_CPUY01000031.1 Protein Homology CDS 5428 6132 . - 0 ID=cds-WP_002217884.1;Parent=gene-AD853_RS18790;Dbxref=GenBank:WP_002217884.1;Name=WP_002217884.1;Note=cleaves DNA at apurinic or apyrimidinic sites;Ontology_term=GO:0006281,GO:0004519;gbkey=CDS;gene=nfi;go_function=endonuclease activity|0004519||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002217884.1;locus_tag=AD853_RS18790;product=deoxyribonuclease V;protein_id=WP_002217884.1;transl_table=11 NZ_CPUY01000031.1 RefSeq gene 6198 7265 . - . ID=gene-AD853_RS18795;Name=hemE;gbkey=Gene;gene=hemE;gene_biotype=protein_coding;locus_tag=AD853_RS18795;old_locus_tag=ERS008462_03787 NZ_CPUY01000031.1 Protein Homology CDS 6198 7265 . - 0 ID=cds-WP_038824780.1;Parent=gene-AD853_RS18795;Dbxref=GenBank:WP_038824780.1;Name=WP_038824780.1;Ontology_term=GO:0006779,GO:0004853;gbkey=CDS;gene=hemE;go_function=uroporphyrinogen decarboxylase activity|0004853||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005166079.1;locus_tag=AD853_RS18795;product=uroporphyrinogen decarboxylase;protein_id=WP_038824780.1;transl_table=11 NZ_CPUY01000031.1 RefSeq pseudogene 7384 8165 . - . ID=gene-AD853_RS18800;Name=AD853_RS18800;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD853_RS18800;old_locus_tag=ERS008462_03788;pseudo=true NZ_CPUY01000031.1 Protein Homology CDS 7384 8165 . - 0 ID=cds-AD853_RS18800;Parent=gene-AD853_RS18800;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210685.1;locus_tag=AD853_RS18800;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CPUY01000031.1 RefSeq gene 8258 9040 . - . ID=gene-AD853_RS18805;Name=nudC;gbkey=Gene;gene=nudC;gene_biotype=protein_coding;locus_tag=AD853_RS18805;old_locus_tag=ERS008462_03789 NZ_CPUY01000031.1 Protein Homology CDS 8258 9040 . - 0 ID=cds-WP_038824782.1;Parent=gene-AD853_RS18805;Dbxref=GenBank:WP_038824782.1;Name=WP_038824782.1;Ontology_term=GO:0000210,GO:0016787;gbkey=CDS;gene=nudC;go_function=NAD+ diphosphatase activity|0000210||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011191554.1;locus_tag=AD853_RS18805;product=NAD(+) diphosphatase;protein_id=WP_038824782.1;transl_table=11 NZ_CPUY01000031.1 RefSeq gene 9137 9646 . + . ID=gene-AD853_RS18810;Name=rsd;gbkey=Gene;gene=rsd;gene_biotype=protein_coding;locus_tag=AD853_RS18810;old_locus_tag=ERS008462_03790 NZ_CPUY01000031.1 Protein Homology CDS 9137 9646 . + 0 ID=cds-WP_011191553.1;Parent=gene-AD853_RS18810;Dbxref=GenBank:WP_011191553.1;Name=WP_011191553.1;Ontology_term=GO:0006355;gbkey=CDS;gene=rsd;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011191553.1;locus_tag=AD853_RS18810;product=sigma D regulator;protein_id=WP_011191553.1;transl_table=11 NZ_CPUY01000031.1 cmsearch riboswitch 9763 9888 . + . ID=id-NZ_CPUY01000031.1:9763..9888;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_CPUY01000031.1 RefSeq gene 10021 12066 . + . ID=gene-AD853_RS18820;Name=thiC;gbkey=Gene;gene=thiC;gene_biotype=protein_coding;locus_tag=AD853_RS18820;old_locus_tag=ERS008462_03792 NZ_CPUY01000031.1 Protein Homology CDS 10021 12066 . + 0 ID=cds-WP_002210682.1;Parent=gene-AD853_RS18820;Dbxref=GenBank:WP_002210682.1;Name=WP_002210682.1;Ontology_term=GO:0009228,GO:0051536;gbkey=CDS;gene=thiC;go_function=iron-sulfur cluster binding|0051536||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012229040.1;locus_tag=AD853_RS18820;product=phosphomethylpyrimidine synthase ThiC;protein_id=WP_002210682.1;transl_table=11 NZ_CPUY01000031.1 RefSeq gene 12053 12727 . + . ID=gene-AD853_RS18825;Name=thiE;gbkey=Gene;gene=thiE;gene_biotype=protein_coding;locus_tag=AD853_RS18825;old_locus_tag=ERS008462_03793 NZ_CPUY01000031.1 Protein Homology CDS 12053 12727 . + 0 ID=cds-WP_012303440.1;Parent=gene-AD853_RS18825;Dbxref=GenBank:WP_012303440.1;Name=WP_012303440.1;Ontology_term=GO:0009228,GO:0004789;gbkey=CDS;gene=thiE;go_function=thiamine-phosphate diphosphorylase activity|0004789||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012303440.1;locus_tag=AD853_RS18825;product=thiamine phosphate synthase;protein_id=WP_012303440.1;transl_table=11 NZ_CPUY01000031.1 RefSeq gene 12717 13514 . + . ID=gene-AD853_RS18830;Name=AD853_RS18830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS18830;old_locus_tag=ERS008462_03794 NZ_CPUY01000031.1 Protein Homology CDS 12717 13514 . + 0 ID=cds-WP_038824783.1;Parent=gene-AD853_RS18830;Dbxref=GenBank:WP_038824783.1;Name=WP_038824783.1;Ontology_term=GO:0016779;gbkey=CDS;go_function=nucleotidyltransferase activity|0016779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210680.1;locus_tag=AD853_RS18830;product=HesA/MoeB/ThiF family protein;protein_id=WP_038824783.1;transl_table=11 NZ_CPUY01000031.1 RefSeq gene 13535 13726 . + . ID=gene-AD853_RS18835;Name=thiS;gbkey=Gene;gene=thiS;gene_biotype=protein_coding;locus_tag=AD853_RS18835;old_locus_tag=ERS008462_03795 NZ_CPUY01000031.1 Protein Homology CDS 13535 13726 . + 0 ID=cds-WP_002355316.1;Parent=gene-AD853_RS18835;Dbxref=GenBank:WP_002355316.1;Name=WP_002355316.1;Ontology_term=GO:0009228,GO:0003824;gbkey=CDS;gene=thiS;go_function=catalytic activity|0003824||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002355316.1;locus_tag=AD853_RS18835;product=sulfur carrier protein ThiS;protein_id=WP_002355316.1;transl_table=11 NZ_CPUY01000031.1 RefSeq gene 13728 14543 . + . ID=gene-AD853_RS18840;Name=AD853_RS18840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS18840;old_locus_tag=ERS008462_03796 NZ_CPUY01000031.1 Protein Homology CDS 13728 14543 . + 0 ID=cds-WP_002228257.1;Parent=gene-AD853_RS18840;Dbxref=GenBank:WP_002228257.1;Name=WP_002228257.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002228257.1;locus_tag=AD853_RS18840;product=thiazole synthase;protein_id=WP_002228257.1;transl_table=11 NZ_CPUY01000031.1 RefSeq gene 14536 15666 . + . ID=gene-AD853_RS18845;Name=thiH;gbkey=Gene;gene=thiH;gene_biotype=protein_coding;locus_tag=AD853_RS18845;old_locus_tag=ERS008462_03797 NZ_CPUY01000031.1 Protein Homology CDS 14536 15666 . + 0 ID=cds-WP_038824784.1;Parent=gene-AD853_RS18845;Dbxref=GenBank:WP_038824784.1;Name=WP_038824784.1;Ontology_term=GO:0009228,GO:0005506,GO:0016829,GO:0051539,GO:1904047;gbkey=CDS;gene=thiH;go_function=iron ion binding|0005506||IEA,lyase activity|0016829||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210678.1;locus_tag=AD853_RS18845;product=2-iminoacetate synthase ThiH;protein_id=WP_038824784.1;transl_table=11 NZ_CPUY01000031.1 RefSeq gene 15974 20194 . - . ID=gene-AD853_RS18855;Name=rpoC;gbkey=Gene;gene=rpoC;gene_biotype=protein_coding;locus_tag=AD853_RS18855;old_locus_tag=ERS008462_03798 NZ_CPUY01000031.1 Protein Homology CDS 15974 20194 . - 0 ID=cds-WP_050124660.1;Parent=gene-AD853_RS18855;Dbxref=GenBank:WP_050124660.1;Name=WP_050124660.1;Ontology_term=GO:0006351,GO:0003677,GO:0003899;gbkey=CDS;gene=rpoC;go_function=DNA binding|0003677||IEA,DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004393389.1;locus_tag=AD853_RS18855;product=DNA-directed RNA polymerase subunit beta';protein_id=WP_050124660.1;transl_table=11 NZ_CPUY01000031.1 RefSeq gene 20323 24351 . - . ID=gene-AD853_RS18860;Name=rpoB;gbkey=Gene;gene=rpoB;gene_biotype=protein_coding;locus_tag=AD853_RS18860;old_locus_tag=ERS008462_03799 NZ_CPUY01000031.1 Protein Homology CDS 20323 24351 . - 0 ID=cds-WP_050124661.1;Parent=gene-AD853_RS18860;Dbxref=GenBank:WP_050124661.1;Name=WP_050124661.1;Ontology_term=GO:0006351,GO:0003677,GO:0003899;gbkey=CDS;gene=rpoB;go_function=DNA binding|0003677||IEA,DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004870488.1;locus_tag=AD853_RS18860;product=DNA-directed RNA polymerase subunit beta;protein_id=WP_050124661.1;transl_table=11 NZ_CPUY01000031.1 RefSeq gene 24694 25062 . - . ID=gene-AD853_RS18865;Name=rplL;gbkey=Gene;gene=rplL;gene_biotype=protein_coding;locus_tag=AD853_RS18865;old_locus_tag=ERS008462_03802 NZ_CPUY01000031.1 Protein Homology CDS 24694 25062 . - 0 ID=cds-WP_002210675.1;Parent=gene-AD853_RS18865;Dbxref=GenBank:WP_002210675.1;Name=WP_002210675.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplL;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011815381.1;locus_tag=AD853_RS18865;product=50S ribosomal protein L7/L12;protein_id=WP_002210675.1;transl_table=11 NZ_CPUY01000031.1 RefSeq gene 25129 25626 . - . ID=gene-AD853_RS18870;Name=rplJ;gbkey=Gene;gene=rplJ;gene_biotype=protein_coding;locus_tag=AD853_RS18870;old_locus_tag=ERS008462_03803 NZ_CPUY01000031.1 Protein Homology CDS 25129 25626 . - 0 ID=cds-WP_002210674.1;Parent=gene-AD853_RS18870;Dbxref=GenBank:WP_002210674.1;Name=WP_002210674.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplJ;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002438625.1;locus_tag=AD853_RS18870;product=50S ribosomal protein L10;protein_id=WP_002210674.1;transl_table=11 NZ_CPUY01000031.1 RefSeq gene 25991 26695 . - . ID=gene-AD853_RS18875;Name=rplA;gbkey=Gene;gene=rplA;gene_biotype=protein_coding;locus_tag=AD853_RS18875;old_locus_tag=ERS008462_03804 NZ_CPUY01000031.1 Protein Homology CDS 25991 26695 . - 0 ID=cds-WP_002210673.1;Parent=gene-AD853_RS18875;Dbxref=GenBank:WP_002210673.1;Name=WP_002210673.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0015934;gbkey=CDS;gene=rplA;go_component=large ribosomal subunit|0015934||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312934.1;locus_tag=AD853_RS18875;product=50S ribosomal protein L1;protein_id=WP_002210673.1;transl_table=11 NZ_CPUY01000031.1 RefSeq gene 26699 27127 . - . ID=gene-AD853_RS18880;Name=rplK;gbkey=Gene;gene=rplK;gene_biotype=protein_coding;locus_tag=AD853_RS18880;old_locus_tag=ERS008462_03805 NZ_CPUY01000031.1 Protein Homology CDS 26699 27127 . - 0 ID=cds-WP_002210672.1;Parent=gene-AD853_RS18880;Dbxref=GenBank:WP_002210672.1;Name=WP_002210672.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplK;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005165805.1;locus_tag=AD853_RS18880;product=50S ribosomal protein L11;protein_id=WP_002210672.1;transl_table=11 NZ_CPUY01000031.1 RefSeq gene 27318 27863 . - . ID=gene-AD853_RS18885;Name=nusG;gbkey=Gene;gene=nusG;gene_biotype=protein_coding;locus_tag=AD853_RS18885;old_locus_tag=ERS008462_03806 NZ_CPUY01000031.1 Protein Homology CDS 27318 27863 . - 0 ID=cds-WP_002210671.1;Parent=gene-AD853_RS18885;Dbxref=GenBank:WP_002210671.1;Name=WP_002210671.1;Ontology_term=GO:0032784;gbkey=CDS;gene=nusG;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004953928.1;locus_tag=AD853_RS18885;product=transcription termination/antitermination protein NusG;protein_id=WP_002210671.1;transl_table=11 NZ_CPUY01000031.1 RefSeq gene 27865 28248 . - . ID=gene-AD853_RS18890;Name=secE;gbkey=Gene;gene=secE;gene_biotype=protein_coding;locus_tag=AD853_RS18890;old_locus_tag=ERS008462_03807 NZ_CPUY01000031.1 Protein Homology CDS 27865 28248 . - 0 ID=cds-WP_002210670.1;Parent=gene-AD853_RS18890;Dbxref=GenBank:WP_002210670.1;Name=WP_002210670.1;gbkey=CDS;gene=secE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007665874.1;locus_tag=AD853_RS18890;product=preprotein translocase subunit SecE;protein_id=WP_002210670.1;transl_table=11 NZ_CPUY01000031.1 RefSeq gene 28488 29672 . - . ID=gene-AD853_RS18895;Name=tuf;gbkey=Gene;gene=tuf;gene_biotype=protein_coding;locus_tag=AD853_RS18895;old_locus_tag=ERS008462_03808 NZ_CPUY01000031.1 Protein Homology CDS 28488 29672 . - 0 ID=cds-WP_002210669.1;Parent=gene-AD853_RS18895;Dbxref=GenBank:WP_002210669.1;Name=WP_002210669.1;Ontology_term=GO:0006414,GO:0003746,GO:0005525;gbkey=CDS;gene=tuf;go_function=translation elongation factor activity|0003746||IEA,GTP binding|0005525||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210669.1;locus_tag=AD853_RS18895;product=elongation factor Tu;protein_id=WP_002210669.1;transl_table=11 NZ_CPUY01000031.1 RefSeq gene 29781 29856 . - . ID=gene-AD853_RS18900;Name=AD853_RS18900;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD853_RS18900;old_locus_tag=ERS008462_03809 NZ_CPUY01000031.1 tRNAscan-SE tRNA 29781 29856 . - . ID=rna-AD853_RS18900;Parent=gene-AD853_RS18900;anticodon=(pos:complement(29821..29823));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD853_RS18900;product=tRNA-Thr NZ_CPUY01000031.1 tRNAscan-SE exon 29781 29856 . - . ID=exon-AD853_RS18900-1;Parent=rna-AD853_RS18900;anticodon=(pos:complement(29821..29823));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD853_RS18900;product=tRNA-Thr NZ_CPUY01000031.1 RefSeq gene 29863 29937 . - . ID=gene-AD853_RS18905;Name=AD853_RS18905;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD853_RS18905;old_locus_tag=ERS008462_03810 NZ_CPUY01000031.1 tRNAscan-SE tRNA 29863 29937 . - . ID=rna-AD853_RS18905;Parent=gene-AD853_RS18905;anticodon=(pos:complement(29902..29904));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD853_RS18905;product=tRNA-Gly NZ_CPUY01000031.1 tRNAscan-SE exon 29863 29937 . - . ID=exon-AD853_RS18905-1;Parent=rna-AD853_RS18905;anticodon=(pos:complement(29902..29904));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD853_RS18905;product=tRNA-Gly NZ_CPUY01000031.1 RefSeq gene 30087 30171 . - . ID=gene-AD853_RS18910;Name=AD853_RS18910;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD853_RS18910;old_locus_tag=ERS008462_03811 NZ_CPUY01000031.1 tRNAscan-SE tRNA 30087 30171 . - . ID=rna-AD853_RS18910;Parent=gene-AD853_RS18910;anticodon=(pos:complement(30135..30137));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD853_RS18910;product=tRNA-Tyr NZ_CPUY01000031.1 tRNAscan-SE exon 30087 30171 . - . ID=exon-AD853_RS18910-1;Parent=rna-AD853_RS18910;anticodon=(pos:complement(30135..30137));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD853_RS18910;product=tRNA-Tyr ##sequence-region NZ_CPUY01000032.1 1 30557 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=633 NZ_CPUY01000032.1 RefSeq region 1 30557 . + . ID=NZ_CPUY01000032.1:1..30557;Dbxref=taxon:633;collection-date=1900/2008;country=South Africa;gbkey=Src;genome=genomic;isolation-source=not known;mol_type=genomic DNA;nat-host=pig;serovar=O:3;strain=IP32544 NZ_CPUY01000032.1 RefSeq pseudogene 1 1360 . - . ID=gene-AD853_RS18915;Name=yapB;end_range=1360,.;gbkey=Gene;gene=yapB;gene_biotype=pseudogene;locus_tag=AD853_RS18915;partial=true;pseudo=true;start_range=.,1 NZ_CPUY01000032.1 Protein Homology CDS 1 1360 . - 0 ID=cds-AD853_RS18915;Parent=gene-AD853_RS18915;Note=YPO2887 is a pseudogene of yapB.%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=1360,.;gbkey=CDS;gene=yapB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012104800.1;locus_tag=AD853_RS18915;partial=true;product=autotransporter YapB;pseudo=true;start_range=.,1;transl_table=11 NZ_CPUY01000032.1 RefSeq pseudogene 1395 3894 . - . ID=gene-AD853_RS21675;Name=AD853_RS21675;end_range=3894,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD853_RS21675;old_locus_tag=ERS008462_03813;partial=true;pseudo=true;start_range=.,1395 NZ_CPUY01000032.1 Protein Homology CDS 1395 3894 . - 0 ID=cds-AD853_RS21675;Parent=gene-AD853_RS21675;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=3894,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002215508.1;locus_tag=AD853_RS21675;partial=true;product=pertactin-like passenger domain-containing protein;pseudo=true;start_range=.,1395;transl_table=11 NZ_CPUY01000032.1 RefSeq pseudogene 3906 5945 . - . ID=gene-AD853_RS18925;Name=AD853_RS18925;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD853_RS18925;old_locus_tag=ERS008462_03814;partial=true;pseudo=true;start_range=.,3906 NZ_CPUY01000032.1 Protein Homology CDS 3906 5945 . - 0 ID=cds-AD853_RS18925;Parent=gene-AD853_RS18925;Note=frameshifted%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012104800.1;locus_tag=AD853_RS18925;partial=true;product=outer membrane autotransporter barrel domain-containing protein;pseudo=true;start_range=.,3906;transl_table=11 NZ_CPUY01000032.1 RefSeq gene 6476 10408 . - . ID=gene-AD853_RS18930;Name=AD853_RS18930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS18930;old_locus_tag=ERS008462_03815 NZ_CPUY01000032.1 Protein Homology CDS 6476 10408 . - 0 ID=cds-WP_155406237.1;Parent=gene-AD853_RS18930;Dbxref=GenBank:WP_155406237.1;Name=WP_155406237.1;Ontology_term=GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011171911.1;locus_tag=AD853_RS18930;product=autotransporter outer membrane beta-barrel domain-containing protein;protein_id=WP_155406237.1;transl_table=11 NZ_CPUY01000032.1 RefSeq gene 11100 13520 . + . ID=gene-AD853_RS18940;Name=AD853_RS18940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS18940;old_locus_tag=ERS008462_03816 NZ_CPUY01000032.1 Protein Homology CDS 11100 13520 . + 0 ID=cds-WP_038824731.1;Parent=gene-AD853_RS18940;Dbxref=GenBank:WP_038824731.1;Name=WP_038824731.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012104804.1;locus_tag=AD853_RS18940;product=peptidase inhibitor family I36 protein;protein_id=WP_038824731.1;transl_table=11 NZ_CPUY01000032.1 RefSeq gene 13846 14274 . + . ID=gene-AD853_RS18945;Name=ndk;gbkey=Gene;gene=ndk;gene_biotype=protein_coding;locus_tag=AD853_RS18945;old_locus_tag=ERS008462_03817 NZ_CPUY01000032.1 Protein Homology CDS 13846 14274 . + 0 ID=cds-WP_004875799.1;Parent=gene-AD853_RS18945;Dbxref=GenBank:WP_004875799.1;Name=WP_004875799.1;Ontology_term=GO:0004550;gbkey=CDS;gene=ndk;go_function=nucleoside diphosphate kinase activity|0004550||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012104805.1;locus_tag=AD853_RS18945;product=nucleoside-diphosphate kinase;protein_id=WP_004875799.1;transl_table=11 NZ_CPUY01000032.1 RefSeq gene 14545 15741 . + . ID=gene-AD853_RS18950;Name=rlmN;gbkey=Gene;gene=rlmN;gene_biotype=protein_coding;gene_synonym=trmG;locus_tag=AD853_RS18950;old_locus_tag=ERS008462_03818 NZ_CPUY01000032.1 Protein Homology CDS 14545 15741 . + 0 ID=cds-WP_050124662.1;Parent=gene-AD853_RS18950;Dbxref=GenBank:WP_050124662.1;Name=WP_050124662.1;gbkey=CDS;gene=rlmN;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004702451.1;locus_tag=AD853_RS18950;product=dual-specificity RNA methyltransferase RlmN;protein_id=WP_050124662.1;transl_table=11 NZ_CPUY01000032.1 RefSeq gene 15895 16644 . + . ID=gene-AD853_RS18955;Name=pilW;gbkey=Gene;gene=pilW;gene_biotype=protein_coding;locus_tag=AD853_RS18955;old_locus_tag=ERS008462_03819 NZ_CPUY01000032.1 Protein Homology CDS 15895 16644 . + 0 ID=cds-WP_011192803.1;Parent=gene-AD853_RS18955;Dbxref=GenBank:WP_011192803.1;Name=WP_011192803.1;Ontology_term=GO:0005515;gbkey=CDS;gene=pilW;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004716157.1;locus_tag=AD853_RS18955;product=type IV pilus biogenesis/stability protein PilW;protein_id=WP_011192803.1;transl_table=11 NZ_CPUY01000032.1 RefSeq gene 16634 17707 . + . ID=gene-AD853_RS18960;Name=rodZ;gbkey=Gene;gene=rodZ;gene_biotype=protein_coding;locus_tag=AD853_RS18960;old_locus_tag=ERS008462_03820 NZ_CPUY01000032.1 Protein Homology CDS 16634 17707 . + 0 ID=cds-WP_038824734.1;Parent=gene-AD853_RS18960;Dbxref=GenBank:WP_038824734.1;Name=WP_038824734.1;Ontology_term=GO:0008360,GO:0003677,GO:0016020;gbkey=CDS;gene=rodZ;go_component=membrane|0016020||IEA;go_function=DNA binding|0003677||IEA;go_process=regulation of cell shape|0008360||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209818.1;locus_tag=AD853_RS18960;product=cytoskeleton protein RodZ;protein_id=WP_038824734.1;transl_table=11 NZ_CPUY01000032.1 RefSeq gene 17811 18938 . + . ID=gene-AD853_RS18965;Name=ispG;gbkey=Gene;gene=ispG;gene_biotype=protein_coding;gene_synonym=gcpE;locus_tag=AD853_RS18965;old_locus_tag=ERS008462_03821 NZ_CPUY01000032.1 Protein Homology CDS 17811 18938 . + 0 ID=cds-WP_002209817.1;Parent=gene-AD853_RS18965;Dbxref=GenBank:WP_002209817.1;Name=WP_002209817.1;Ontology_term=GO:0008152,GO:0046429;gbkey=CDS;gene=ispG;go_function=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity (ferredoxin)|0046429||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209817.1;locus_tag=AD853_RS18965;product=flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase;protein_id=WP_002209817.1;transl_table=11 NZ_CPUY01000032.1 RefSeq gene 19126 20400 . + . ID=gene-AD853_RS18970;Name=hisS;gbkey=Gene;gene=hisS;gene_biotype=protein_coding;locus_tag=AD853_RS18970;old_locus_tag=ERS008462_03822 NZ_CPUY01000032.1 Protein Homology CDS 19126 20400 . + 0 ID=cds-WP_038824736.1;Parent=gene-AD853_RS18970;Dbxref=GenBank:WP_038824736.1;Name=WP_038824736.1;Ontology_term=GO:0006427,GO:0004821,GO:0005524,GO:0005737;gbkey=CDS;gene=hisS;go_component=cytoplasm|0005737||IEA;go_function=histidine-tRNA ligase activity|0004821||IEA,ATP binding|0005524||IEA;go_process=histidyl-tRNA aminoacylation|0006427||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004875804.1;locus_tag=AD853_RS18970;product=histidine--tRNA ligase;protein_id=WP_038824736.1;transl_table=11 NZ_CPUY01000032.1 RefSeq gene 20414 21049 . + . ID=gene-AD853_RS18975;Name=AD853_RS18975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS18975;old_locus_tag=ERS008462_03823 NZ_CPUY01000032.1 Protein Homology CDS 20414 21049 . + 0 ID=cds-WP_002209815.1;Parent=gene-AD853_RS18975;Dbxref=GenBank:WP_002209815.1;Name=WP_002209815.1;Ontology_term=GO:0005515,GO:0044877;gbkey=CDS;go_function=protein binding|0005515||IEA,protein-containing complex binding|0044877||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012303850.1;locus_tag=AD853_RS18975;product=YfgM family protein;protein_id=WP_002209815.1;transl_table=11 NZ_CPUY01000032.1 RefSeq gene 21061 22242 . + . ID=gene-AD853_RS18980;Name=bamB;gbkey=Gene;gene=bamB;gene_biotype=protein_coding;locus_tag=AD853_RS18980;old_locus_tag=ERS008462_03824 NZ_CPUY01000032.1 Protein Homology CDS 21061 22242 . + 0 ID=cds-WP_011192801.1;Parent=gene-AD853_RS18980;Dbxref=GenBank:WP_011192801.1;Name=WP_011192801.1;Ontology_term=GO:0005515;gbkey=CDS;gene=bamB;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013650286.1;locus_tag=AD853_RS18980;product=outer membrane protein assembly factor BamB;protein_id=WP_011192801.1;transl_table=11 NZ_CPUY01000032.1 RefSeq gene 22390 23877 . + . ID=gene-AD853_RS18985;Name=der;gbkey=Gene;gene=der;gene_biotype=protein_coding;locus_tag=AD853_RS18985;old_locus_tag=ERS008462_03825 NZ_CPUY01000032.1 Protein Homology CDS 22390 23877 . + 0 ID=cds-WP_002209813.1;Parent=gene-AD853_RS18985;Dbxref=GenBank:WP_002209813.1;Name=WP_002209813.1;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0043022,GO:0005737;gbkey=CDS;gene=der;go_component=cytoplasm|0005737||IEA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,ribosome binding|0043022||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005191901.1;locus_tag=AD853_RS18985;product=ribosome biogenesis GTPase Der;protein_id=WP_002209813.1;transl_table=11 NZ_CPUY01000032.1 RefSeq gene 24224 25180 . + . ID=gene-AD853_RS18990;Name=AD853_RS18990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS18990;old_locus_tag=ERS008462_03826 NZ_CPUY01000032.1 Protein Homology CDS 24224 25180 . + 0 ID=cds-WP_038824940.1;Parent=gene-AD853_RS18990;Dbxref=GenBank:WP_038824940.1;Name=WP_038824940.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019081816.1;locus_tag=AD853_RS18990;product=AEC family transporter;protein_id=WP_038824940.1;transl_table=11 NZ_CPUY01000032.1 RefSeq gene 25229 25453 . + . ID=gene-AD853_RS18995;Name=AD853_RS18995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS18995;old_locus_tag=ERS008462_03827 NZ_CPUY01000032.1 Protein Homology CDS 25229 25453 . + 0 ID=cds-WP_002209811.1;Parent=gene-AD853_RS18995;Dbxref=GenBank:WP_002209811.1;Name=WP_002209811.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209811.1;locus_tag=AD853_RS18995;product=zinc ribbon domain-containing protein;protein_id=WP_002209811.1;transl_table=11 NZ_CPUY01000032.1 RefSeq gene 25570 26949 . - . ID=gene-AD853_RS19000;Name=xseA;gbkey=Gene;gene=xseA;gene_biotype=protein_coding;locus_tag=AD853_RS19000;old_locus_tag=ERS008462_03828 NZ_CPUY01000032.1 Protein Homology CDS 25570 26949 . - 0 ID=cds-WP_038825029.1;Parent=gene-AD853_RS19000;Dbxref=GenBank:WP_038825029.1;Name=WP_038825029.1;Ontology_term=GO:0006308,GO:0008855,GO:0009318;gbkey=CDS;gene=xseA;go_component=exodeoxyribonuclease VII complex|0009318||IEA;go_function=exodeoxyribonuclease VII activity|0008855||IEA;go_process=DNA catabolic process|0006308||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209810.1;locus_tag=AD853_RS19000;product=exodeoxyribonuclease VII large subunit;protein_id=WP_038825029.1;transl_table=11 NZ_CPUY01000032.1 RefSeq gene 27119 28582 . + . ID=gene-AD853_RS19005;Name=guaB;gbkey=Gene;gene=guaB;gene_biotype=protein_coding;locus_tag=AD853_RS19005;old_locus_tag=ERS008462_03829 NZ_CPUY01000032.1 Protein Homology CDS 27119 28582 . + 0 ID=cds-WP_038825031.1;Parent=gene-AD853_RS19005;Dbxref=GenBank:WP_038825031.1;Name=WP_038825031.1;Ontology_term=GO:0006164,GO:0003938;gbkey=CDS;gene=guaB;go_function=IMP dehydrogenase activity|0003938||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002227862.1;locus_tag=AD853_RS19005;product=IMP dehydrogenase;protein_id=WP_038825031.1;transl_table=11 NZ_CPUY01000032.1 RefSeq gene 28762 30339 . + . ID=gene-AD853_RS19015;Name=guaA;gbkey=Gene;gene=guaA;gene_biotype=protein_coding;locus_tag=AD853_RS19015;old_locus_tag=ERS008462_03830 NZ_CPUY01000032.1 Protein Homology CDS 28762 30339 . + 0 ID=cds-WP_011192796.1;Parent=gene-AD853_RS19015;Dbxref=GenBank:WP_011192796.1;Name=WP_011192796.1;Ontology_term=GO:0006177,GO:0003922,GO:0005524,GO:0016462;gbkey=CDS;gene=guaA;go_function=GMP synthase (glutamine-hydrolyzing) activity|0003922||IEA,ATP binding|0005524||IEA,pyrophosphatase activity|0016462||IEA;go_process=GMP biosynthetic process|0006177||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311396.1;locus_tag=AD853_RS19015;product=glutamine-hydrolyzing GMP synthase;protein_id=WP_011192796.1;transl_table=11 ##sequence-region NZ_CPUY01000033.1 1 27686 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=633 NZ_CPUY01000033.1 RefSeq region 1 27686 . + . ID=NZ_CPUY01000033.1:1..27686;Dbxref=taxon:633;collection-date=1900/2008;country=South Africa;gbkey=Src;genome=genomic;isolation-source=not known;mol_type=genomic DNA;nat-host=pig;serovar=O:3;strain=IP32544 NZ_CPUY01000033.1 RefSeq gene 431 1234 . + . ID=gene-AD853_RS19020;Name=dkgB;gbkey=Gene;gene=dkgB;gene_biotype=protein_coding;locus_tag=AD853_RS19020;old_locus_tag=ERS008462_03831 NZ_CPUY01000033.1 Protein Homology CDS 431 1234 . + 0 ID=cds-WP_038823736.1;Parent=gene-AD853_RS19020;Dbxref=GenBank:WP_038823736.1;Name=WP_038823736.1;Ontology_term=GO:0047834;gbkey=CDS;gene=dkgB;go_function=D-threo-aldose 1-dehydrogenase activity|0047834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414743.1;locus_tag=AD853_RS19020;product=2%2C5-didehydrogluconate reductase DkgB;protein_id=WP_038823736.1;transl_table=11 NZ_CPUY01000033.1 RefSeq gene 1516 1692 . + . ID=gene-AD853_RS22350;Name=AD853_RS22350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS22350 NZ_CPUY01000033.1 Protein Homology CDS 1516 1692 . + 0 ID=cds-WP_230517829.1;Parent=gene-AD853_RS22350;Dbxref=GenBank:WP_230517829.1;Name=WP_230517829.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019984.6;locus_tag=AD853_RS22350;product=hypothetical protein;protein_id=WP_230517829.1;transl_table=11 NZ_CPUY01000033.1 RefSeq gene 2094 2876 . + . ID=gene-AD853_RS19030;Name=AD853_RS19030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS19030;old_locus_tag=ERS008462_03833 NZ_CPUY01000033.1 Protein Homology CDS 2094 2876 . + 0 ID=cds-WP_002220059.1;Parent=gene-AD853_RS19030;Dbxref=GenBank:WP_002220059.1;Name=WP_002220059.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005166582.1;locus_tag=AD853_RS19030;product=endonuclease/exonuclease/phosphatase family protein;protein_id=WP_002220059.1;transl_table=11 NZ_CPUY01000033.1 RefSeq gene 2919 4298 . - . ID=gene-AD853_RS19035;Name=mltD;gbkey=Gene;gene=mltD;gene_biotype=protein_coding;locus_tag=AD853_RS19035;old_locus_tag=ERS008462_03834 NZ_CPUY01000033.1 Protein Homology CDS 2919 4298 . - 0 ID=cds-WP_012104749.1;Parent=gene-AD853_RS19035;Dbxref=GenBank:WP_012104749.1;Name=WP_012104749.1;Ontology_term=GO:0000270,GO:0008933,GO:0016020;gbkey=CDS;gene=mltD;go_component=membrane|0016020||IEA;go_function=peptidoglycan lytic transglycosylase activity|0008933||IEA;go_process=peptidoglycan metabolic process|0000270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002217338.1;locus_tag=AD853_RS19035;product=murein transglycosylase D;protein_id=WP_012104749.1;transl_table=11 NZ_CPUY01000033.1 RefSeq gene 4370 5125 . - . ID=gene-AD853_RS19040;Name=gloB;gbkey=Gene;gene=gloB;gene_biotype=protein_coding;locus_tag=AD853_RS19040;old_locus_tag=ERS008462_03835 NZ_CPUY01000033.1 Protein Homology CDS 4370 5125 . - 0 ID=cds-WP_038823735.1;Parent=gene-AD853_RS19040;Dbxref=GenBank:WP_038823735.1;Name=WP_038823735.1;Ontology_term=GO:0019243,GO:0004416;gbkey=CDS;gene=gloB;go_function=hydroxyacylglutathione hydrolase activity|0004416||IEA;go_process=methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione|0019243||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210697.1;locus_tag=AD853_RS19040;product=hydroxyacylglutathione hydrolase;protein_id=WP_038823735.1;transl_table=11 NZ_CPUY01000033.1 RefSeq gene 5170 5889 . + . ID=gene-AD853_RS19045;Name=AD853_RS19045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS19045;old_locus_tag=ERS008462_03836 NZ_CPUY01000033.1 Protein Homology CDS 5170 5889 . + 0 ID=cds-WP_002210698.1;Parent=gene-AD853_RS19045;Dbxref=GenBank:WP_002210698.1;Name=WP_002210698.1;Ontology_term=GO:0032259,GO:0008168,GO:0008757,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004390358.1;locus_tag=AD853_RS19045;product=class I SAM-dependent methyltransferase;protein_id=WP_002210698.1;transl_table=11 NZ_CPUY01000033.1 RefSeq gene 5944 6408 . - . ID=gene-AD853_RS19050;Name=rnhA;gbkey=Gene;gene=rnhA;gene_biotype=protein_coding;locus_tag=AD853_RS19050;old_locus_tag=ERS008462_03837 NZ_CPUY01000033.1 Protein Homology CDS 5944 6408 . - 0 ID=cds-WP_002210699.1;Parent=gene-AD853_RS19050;Dbxref=GenBank:WP_002210699.1;Name=WP_002210699.1;Ontology_term=GO:0003676,GO:0004523;gbkey=CDS;gene=rnhA;go_function=nucleic acid binding|0003676||IEA,RNA-DNA hybrid ribonuclease activity|0004523||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002387923.1;locus_tag=AD853_RS19050;product=ribonuclease HI;protein_id=WP_002210699.1;transl_table=11 NZ_CPUY01000033.1 RefSeq gene 6478 7242 . + . ID=gene-AD853_RS19055;Name=dnaQ;gbkey=Gene;gene=dnaQ;gene_biotype=protein_coding;locus_tag=AD853_RS19055;old_locus_tag=ERS008462_03838 NZ_CPUY01000033.1 Protein Homology CDS 6478 7242 . + 0 ID=cds-WP_002210700.1;Parent=gene-AD853_RS19055;Dbxref=GenBank:WP_002210700.1;Name=WP_002210700.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887;gbkey=CDS;gene=dnaQ;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210700.1;locus_tag=AD853_RS19055;product=DNA polymerase III subunit epsilon;protein_id=WP_002210700.1;transl_table=11 NZ_CPUY01000033.1 RefSeq gene 7355 7431 . + . ID=gene-AD853_RS19060;Name=AD853_RS19060;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD853_RS19060;old_locus_tag=ERS008462_03839 NZ_CPUY01000033.1 tRNAscan-SE tRNA 7355 7431 . + . ID=rna-AD853_RS19060;Parent=gene-AD853_RS19060;anticodon=(pos:7389..7391);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD853_RS19060;product=tRNA-Asp NZ_CPUY01000033.1 tRNAscan-SE exon 7355 7431 . + . ID=exon-AD853_RS19060-1;Parent=rna-AD853_RS19060;anticodon=(pos:7389..7391);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD853_RS19060;product=tRNA-Asp NZ_CPUY01000033.1 RefSeq gene 7488 8972 . - . ID=gene-AD853_RS19065;Name=AD853_RS19065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS19065;old_locus_tag=ERS008462_03840 NZ_CPUY01000033.1 Protein Homology CDS 7488 8972 . - 0 ID=cds-WP_012303765.1;Parent=gene-AD853_RS19065;Dbxref=GenBank:WP_012303765.1;Name=WP_012303765.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012303765.1;locus_tag=AD853_RS19065;product=NCS1 family nucleobase:cation symporter-1;protein_id=WP_012303765.1;transl_table=11 NZ_CPUY01000033.1 RefSeq gene 9293 10243 . + . ID=gene-AD853_RS19070;Name=puuE;gbkey=Gene;gene=puuE;gene_biotype=protein_coding;locus_tag=AD853_RS19070;old_locus_tag=ERS008462_03841 NZ_CPUY01000033.1 Protein Homology CDS 9293 10243 . + 0 ID=cds-WP_011192850.1;Parent=gene-AD853_RS19070;Dbxref=GenBank:WP_011192850.1;Name=WP_011192850.1;Ontology_term=GO:0000256,GO:0016810;gbkey=CDS;gene=puuE;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA;go_process=allantoin catabolic process|0000256||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192850.1;locus_tag=AD853_RS19070;product=allantoinase PuuE;protein_id=WP_011192850.1;transl_table=11 NZ_CPUY01000033.1 RefSeq pseudogene 10371 10439 . + . ID=gene-AD853_RS22715;Name=AD853_RS22715;end_range=10439,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD853_RS22715;partial=true;pseudo=true NZ_CPUY01000033.1 Protein Homology CDS 10371 10439 . + 0 ID=cds-AD853_RS22715;Parent=gene-AD853_RS22715;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=10439,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002378124.1;locus_tag=AD853_RS22715;partial=true;product=gluconate 5-dehydrogenase;pseudo=true;transl_table=11 NZ_CPUY01000033.1 RefSeq gene 10473 11477 . - . ID=gene-AD853_RS19075;Name=proX;gbkey=Gene;gene=proX;gene_biotype=protein_coding;locus_tag=AD853_RS19075;old_locus_tag=ERS008462_03842 NZ_CPUY01000033.1 Protein Homology CDS 10473 11477 . - 0 ID=cds-WP_011192849.1;Parent=gene-AD853_RS19075;Dbxref=GenBank:WP_011192849.1;Name=WP_011192849.1;Ontology_term=GO:0055085,GO:0022857,GO:0043190;gbkey=CDS;gene=proX;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011906274.1;locus_tag=AD853_RS19075;product=glycine betaine/L-proline ABC transporter substrate-binding protein ProX;protein_id=WP_011192849.1;transl_table=11 NZ_CPUY01000033.1 RefSeq gene 11525 12691 . - . ID=gene-AD853_RS19080;Name=proW;gbkey=Gene;gene=proW;gene_biotype=protein_coding;locus_tag=AD853_RS19080;old_locus_tag=ERS008462_03843 NZ_CPUY01000033.1 Protein Homology CDS 11525 12691 . - 0 ID=cds-WP_002212209.1;Parent=gene-AD853_RS19080;Dbxref=GenBank:WP_002212209.1;Name=WP_002212209.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=proW;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212209.1;locus_tag=AD853_RS19080;product=glycine betaine/L-proline ABC transporter permease ProW;protein_id=WP_002212209.1;transl_table=11 NZ_CPUY01000033.1 RefSeq gene 12684 13883 . - . ID=gene-AD853_RS19085;Name=proV;gbkey=Gene;gene=proV;gene_biotype=protein_coding;locus_tag=AD853_RS19085;old_locus_tag=ERS008462_03844 NZ_CPUY01000033.1 Protein Homology CDS 12684 13883 . - 0 ID=cds-WP_002212210.1;Parent=gene-AD853_RS19085;Dbxref=GenBank:WP_002212210.1;Name=WP_002212210.1;Ontology_term=GO:0031460,GO:0005524;gbkey=CDS;gene=proV;go_function=ATP binding|0005524||IEA;go_process=glycine betaine transport|0031460||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212210.1;locus_tag=AD853_RS19085;product=glycine betaine/L-proline ABC transporter ATP-binding protein ProV;protein_id=WP_002212210.1;transl_table=11 NZ_CPUY01000033.1 RefSeq gene 14559 15530 . - . ID=gene-AD853_RS19090;Name=nrdF;gbkey=Gene;gene=nrdF;gene_biotype=protein_coding;locus_tag=AD853_RS19090;old_locus_tag=ERS008462_03845 NZ_CPUY01000033.1 Protein Homology CDS 14559 15530 . - 0 ID=cds-WP_002212211.1;Parent=gene-AD853_RS19090;Dbxref=GenBank:WP_002212211.1;Name=WP_002212211.1;Ontology_term=GO:0009263,GO:0004748,GO:0005971;gbkey=CDS;gene=nrdF;go_component=ribonucleoside-diphosphate reductase complex|0005971||IEA;go_function=ribonucleoside-diphosphate reductase activity%2C thioredoxin disulfide as acceptor|0004748||IEA;go_process=deoxyribonucleotide biosynthetic process|0009263||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012104754.1;locus_tag=AD853_RS19090;product=class 1b ribonucleoside-diphosphate reductase subunit beta;protein_id=WP_002212211.1;transl_table=11 NZ_CPUY01000033.1 RefSeq gene 15619 17769 . - . ID=gene-AD853_RS19095;Name=nrdE;gbkey=Gene;gene=nrdE;gene_biotype=protein_coding;locus_tag=AD853_RS19095;old_locus_tag=ERS008462_03846 NZ_CPUY01000033.1 Protein Homology CDS 15619 17769 . - 0 ID=cds-WP_011192848.1;Parent=gene-AD853_RS19095;Dbxref=GenBank:WP_011192848.1;Name=WP_011192848.1;Ontology_term=GO:0006260,GO:0004748,GO:0005524;gbkey=CDS;gene=nrdE;go_function=ribonucleoside-diphosphate reductase activity%2C thioredoxin disulfide as acceptor|0004748||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005176973.1;locus_tag=AD853_RS19095;product=class 1b ribonucleoside-diphosphate reductase subunit alpha;protein_id=WP_011192848.1;transl_table=11 NZ_CPUY01000033.1 RefSeq gene 17751 18155 . - . ID=gene-AD853_RS19100;Name=nrdI;gbkey=Gene;gene=nrdI;gene_biotype=protein_coding;locus_tag=AD853_RS19100;old_locus_tag=ERS008462_03847 NZ_CPUY01000033.1 Protein Homology CDS 17751 18155 . - 0 ID=cds-WP_002215935.1;Parent=gene-AD853_RS19100;Dbxref=GenBank:WP_002215935.1;Name=WP_002215935.1;Ontology_term=GO:0009263,GO:0036211,GO:0010181;gbkey=CDS;gene=nrdI;go_function=FMN binding|0010181||IEA;go_process=deoxyribonucleotide biosynthetic process|0009263||IEA,protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012146428.1;locus_tag=AD853_RS19100;product=class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI;protein_id=WP_002215935.1;transl_table=11 NZ_CPUY01000033.1 RefSeq gene 18169 18405 . - . ID=gene-AD853_RS19105;Name=AD853_RS19105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS19105;old_locus_tag=ERS008462_03848 NZ_CPUY01000033.1 Protein Homology CDS 18169 18405 . - 0 ID=cds-WP_002212214.1;Parent=gene-AD853_RS19105;Dbxref=GenBank:WP_002212214.1;Name=WP_002212214.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212214.1;locus_tag=AD853_RS19105;product=redoxin NrdH;protein_id=WP_002212214.1;transl_table=11 NZ_CPUY01000033.1 RefSeq gene 18909 19274 . + . ID=gene-AD853_RS19110;Name=asr;gbkey=Gene;gene=asr;gene_biotype=protein_coding;locus_tag=AD853_RS19110;old_locus_tag=ERS008462_03849 NZ_CPUY01000033.1 Protein Homology CDS 18909 19274 . + 0 ID=cds-WP_038825017.1;Parent=gene-AD853_RS19110;Dbxref=GenBank:WP_038825017.1;Name=WP_038825017.1;gbkey=CDS;gene=asr;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016673947.1;locus_tag=AD853_RS19110;product=acid resistance repetitive basic protein Asr;protein_id=WP_038825017.1;transl_table=11 NZ_CPUY01000033.1 RefSeq gene 19753 20088 . + . ID=gene-AD853_RS19115;Name=AD853_RS19115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS19115;old_locus_tag=ERS008462_03850 NZ_CPUY01000033.1 Protein Homology CDS 19753 20088 . + 0 ID=cds-WP_002212216.1;Parent=gene-AD853_RS19115;Dbxref=GenBank:WP_002212216.1;Name=WP_002212216.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212216.1;locus_tag=AD853_RS19115;product=DUF2002 family protein;protein_id=WP_002212216.1;transl_table=11 NZ_CPUY01000033.1 RefSeq gene 20186 20635 . - . ID=gene-AD853_RS19120;Name=AD853_RS19120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS19120;old_locus_tag=ERS008462_03851 NZ_CPUY01000033.1 Protein Homology CDS 20186 20635 . - 0 ID=cds-WP_002212217.1;Parent=gene-AD853_RS19120;Dbxref=GenBank:WP_002212217.1;Name=WP_002212217.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012104755.1;locus_tag=AD853_RS19120;product=DUF1198 domain-containing protein;protein_id=WP_002212217.1;transl_table=11 NZ_CPUY01000033.1 RefSeq gene 20782 21120 . - . ID=gene-AD853_RS19125;Name=AD853_RS19125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS19125;old_locus_tag=ERS008462_03852 NZ_CPUY01000033.1 Protein Homology CDS 20782 21120 . - 0 ID=cds-WP_002224857.1;Parent=gene-AD853_RS19125;Dbxref=GenBank:WP_002224857.1;Name=WP_002224857.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002224857.1;locus_tag=AD853_RS19125;product=MbeD/MobD family mobilization/exclusion family protein;protein_id=WP_002224857.1;transl_table=11 NZ_CPUY01000033.1 RefSeq gene 21628 21840 . + . ID=gene-AD853_RS19130;Name=cspE;gbkey=Gene;gene=cspE;gene_biotype=protein_coding;gene_synonym=gicA,msmC;locus_tag=AD853_RS19130 NZ_CPUY01000033.1 Protein Homology CDS 21628 21840 . + 0 ID=cds-WP_002212220.1;Parent=gene-AD853_RS19130;Dbxref=GenBank:WP_002212220.1;Name=WP_002212220.1;Ontology_term=GO:0031564,GO:0001072,GO:0003697,GO:0003723;gbkey=CDS;gene=cspE;go_function=transcription antitermination factor activity%2C RNA binding|0001072||IEA,single-stranded DNA binding|0003697||IEA,RNA binding|0003723||IEA;go_process=transcription antitermination|0031564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210052.1;locus_tag=AD853_RS19130;product=transcription antiterminator/RNA stability regulator CspE;protein_id=WP_002212220.1;transl_table=11 NZ_CPUY01000033.1 RefSeq gene 22636 24213 . + . ID=gene-AD853_RS19135;Name=AD853_RS19135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS19135;old_locus_tag=ERS008462_03854 NZ_CPUY01000033.1 Protein Homology CDS 22636 24213 . + 0 ID=cds-WP_038824396.1;Parent=gene-AD853_RS19135;Dbxref=GenBank:WP_038824396.1;Name=WP_038824396.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192846.1;locus_tag=AD853_RS19135;product=ABC transporter substrate-binding protein;protein_id=WP_038824396.1;transl_table=11 NZ_CPUY01000033.1 RefSeq gene 24213 25181 . + . ID=gene-AD853_RS19140;Name=AD853_RS19140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS19140;old_locus_tag=ERS008462_03855 NZ_CPUY01000033.1 Protein Homology CDS 24213 25181 . + 0 ID=cds-WP_002212223.1;Parent=gene-AD853_RS19140;Dbxref=GenBank:WP_002212223.1;Name=WP_002212223.1;Ontology_term=GO:0055085;gbkey=CDS;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212223.1;locus_tag=AD853_RS19140;product=ABC transporter permease;protein_id=WP_002212223.1;transl_table=11 NZ_CPUY01000033.1 RefSeq gene 25178 25984 . + . ID=gene-AD853_RS19145;Name=AD853_RS19145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS19145;old_locus_tag=ERS008462_03856 NZ_CPUY01000033.1 Protein Homology CDS 25178 25984 . + 0 ID=cds-WP_002212224.1;Parent=gene-AD853_RS19145;Dbxref=GenBank:WP_002212224.1;Name=WP_002212224.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212224.1;locus_tag=AD853_RS19145;product=ABC transporter permease;protein_id=WP_002212224.1;transl_table=11 NZ_CPUY01000033.1 RefSeq gene 25984 26790 . + . ID=gene-AD853_RS19150;Name=AD853_RS19150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS19150;old_locus_tag=ERS008462_03857 NZ_CPUY01000033.1 Protein Homology CDS 25984 26790 . + 0 ID=cds-WP_002212225.1;Parent=gene-AD853_RS19150;Dbxref=GenBank:WP_002212225.1;Name=WP_002212225.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012229969.1;locus_tag=AD853_RS19150;product=ATP-binding cassette domain-containing protein;protein_id=WP_002212225.1;transl_table=11 NZ_CPUY01000033.1 RefSeq gene 26783 27448 . + . ID=gene-AD853_RS19155;Name=AD853_RS19155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS19155;old_locus_tag=ERS008462_03858 NZ_CPUY01000033.1 Protein Homology CDS 26783 27448 . + 0 ID=cds-WP_002212226.1;Parent=gene-AD853_RS19155;Dbxref=GenBank:WP_002212226.1;Name=WP_002212226.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212226.1;locus_tag=AD853_RS19155;product=ATP-binding cassette domain-containing protein;protein_id=WP_002212226.1;transl_table=11 ##sequence-region NZ_CPUY01000034.1 1 27088 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=633 NZ_CPUY01000034.1 RefSeq region 1 27088 . + . ID=NZ_CPUY01000034.1:1..27088;Dbxref=taxon:633;collection-date=1900/2008;country=South Africa;gbkey=Src;genome=genomic;isolation-source=not known;mol_type=genomic DNA;nat-host=pig;serovar=O:3;strain=IP32544 NZ_CPUY01000034.1 RefSeq gene 122 880 . + . ID=gene-AD853_RS19160;Name=ispU;gbkey=Gene;gene=ispU;gene_biotype=protein_coding;gene_synonym=uppS;locus_tag=AD853_RS19160;old_locus_tag=ERS008462_03860 NZ_CPUY01000034.1 Protein Homology CDS 122 880 . + 0 ID=cds-WP_002212136.1;Parent=gene-AD853_RS19160;Dbxref=GenBank:WP_002212136.1;Name=WP_002212136.1;Ontology_term=GO:0043164,GO:0004659,GO:0008834;gbkey=CDS;gene=ispU;go_function=prenyltransferase activity|0004659||IEA,ditrans%2Cpolycis-undecaprenyl-diphosphate synthase [(2E%2C6E)-farnesyl-diphosphate specific] activity|0008834||IEA;go_process=Gram-negative-bacterium-type cell wall biogenesis|0043164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212136.1;locus_tag=AD853_RS19160;product=(2E%2C6E)-farnesyl-diphosphate-specific ditrans%2Cpolycis-undecaprenyl-diphosphate synthase;protein_id=WP_002212136.1;transl_table=11 NZ_CPUY01000034.1 RefSeq gene 890 1738 . + . ID=gene-AD853_RS19165;Name=cdsA;gbkey=Gene;gene=cdsA;gene_biotype=protein_coding;locus_tag=AD853_RS19165;old_locus_tag=ERS008462_03861 NZ_CPUY01000034.1 Protein Homology CDS 890 1738 . + 0 ID=cds-WP_002212137.1;Parent=gene-AD853_RS19165;Dbxref=GenBank:WP_002212137.1;Name=WP_002212137.1;Ontology_term=GO:0016772;gbkey=CDS;gene=cdsA;go_function=transferase activity%2C transferring phosphorus-containing groups|0016772||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005173216.1;locus_tag=AD853_RS19165;product=phosphatidate cytidylyltransferase;protein_id=WP_002212137.1;transl_table=11 NZ_CPUY01000034.1 RefSeq gene 1767 3122 . + . ID=gene-AD853_RS19170;Name=rseP;gbkey=Gene;gene=rseP;gene_biotype=protein_coding;locus_tag=AD853_RS19170;old_locus_tag=ERS008462_03862 NZ_CPUY01000034.1 Protein Homology CDS 1767 3122 . + 0 ID=cds-WP_002212138.1;Parent=gene-AD853_RS19170;Dbxref=GenBank:WP_002212138.1;Name=WP_002212138.1;Ontology_term=GO:0006508,GO:0004222,GO:0005515,GO:0016020;gbkey=CDS;gene=rseP;go_component=membrane|0016020||IEA;go_function=metalloendopeptidase activity|0004222||IEA,protein binding|0005515||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212138.1;locus_tag=AD853_RS19170;product=sigma E protease regulator RseP;protein_id=WP_002212138.1;transl_table=11 NZ_CPUY01000034.1 RefSeq gene 3159 5546 . + . ID=gene-AD853_RS19175;Name=bamA;gbkey=Gene;gene=bamA;gene_biotype=protein_coding;locus_tag=AD853_RS19175;old_locus_tag=ERS008462_03863 NZ_CPUY01000034.1 Protein Homology CDS 3159 5546 . + 0 ID=cds-WP_002212139.1;Parent=gene-AD853_RS19175;Dbxref=GenBank:WP_002212139.1;Name=WP_002212139.1;Ontology_term=GO:0071709,GO:0009279;gbkey=CDS;gene=bamA;go_component=cell outer membrane|0009279||IEA;go_process=membrane assembly|0071709||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019078902.1;locus_tag=AD853_RS19175;product=outer membrane protein assembly factor BamA;protein_id=WP_002212139.1;transl_table=11 NZ_CPUY01000034.1 RefSeq gene 5704 6201 . + . ID=gene-AD853_RS19180;Name=skp;gbkey=Gene;gene=skp;gene_biotype=protein_coding;gene_synonym=hlpA,ompH;locus_tag=AD853_RS19180;old_locus_tag=ERS008462_03864 NZ_CPUY01000034.1 Protein Homology CDS 5704 6201 . + 0 ID=cds-WP_002212140.1;Parent=gene-AD853_RS19180;Dbxref=GenBank:WP_002212140.1;Name=WP_002212140.1;gbkey=CDS;gene=skp;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212140.1;locus_tag=AD853_RS19180;product=molecular chaperone Skp;protein_id=WP_002212140.1;transl_table=11 NZ_CPUY01000034.1 RefSeq gene 6205 7227 . + . ID=gene-AD853_RS19185;Name=lpxD;gbkey=Gene;gene=lpxD;gene_biotype=protein_coding;locus_tag=AD853_RS19185;old_locus_tag=ERS008462_03865 NZ_CPUY01000034.1 Protein Homology CDS 6205 7227 . + 0 ID=cds-WP_012104741.1;Parent=gene-AD853_RS19185;Dbxref=GenBank:WP_012104741.1;Name=WP_012104741.1;Ontology_term=GO:0009245,GO:0016410;gbkey=CDS;gene=lpxD;go_function=N-acyltransferase activity|0016410||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212141.1;locus_tag=AD853_RS19185;product=UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase;protein_id=WP_012104741.1;transl_table=11 NZ_CPUY01000034.1 RefSeq gene 7385 7900 . + . ID=gene-AD853_RS19190;Name=fabZ;gbkey=Gene;gene=fabZ;gene_biotype=protein_coding;locus_tag=AD853_RS19190;old_locus_tag=ERS008462_03866 NZ_CPUY01000034.1 Protein Homology CDS 7385 7900 . + 0 ID=cds-WP_038401107.1;Parent=gene-AD853_RS19190;Dbxref=GenBank:WP_038401107.1;Name=WP_038401107.1;gbkey=CDS;gene=fabZ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002217656.1;locus_tag=AD853_RS19190;product=3-hydroxyacyl-ACP dehydratase FabZ;protein_id=WP_038401107.1;transl_table=11 NZ_CPUY01000034.1 RefSeq gene 7904 8692 . + . ID=gene-AD853_RS19195;Name=lpxA;gbkey=Gene;gene=lpxA;gene_biotype=protein_coding;locus_tag=AD853_RS19195;old_locus_tag=ERS008462_03867 NZ_CPUY01000034.1 Protein Homology CDS 7904 8692 . + 0 ID=cds-WP_002212143.1;Parent=gene-AD853_RS19195;Dbxref=GenBank:WP_002212143.1;Name=WP_002212143.1;Ontology_term=GO:0008610,GO:0008780;gbkey=CDS;gene=lpxA;go_function=acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase activity|0008780||IEA;go_process=lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414723.1;locus_tag=AD853_RS19195;product=acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase;protein_id=WP_002212143.1;transl_table=11 NZ_CPUY01000034.1 RefSeq gene 8696 9880 . + . ID=gene-AD853_RS19200;Name=lpxB;gbkey=Gene;gene=lpxB;gene_biotype=protein_coding;locus_tag=AD853_RS19200;old_locus_tag=ERS008462_03868 NZ_CPUY01000034.1 Protein Homology CDS 8696 9880 . + 0 ID=cds-WP_038825662.1;Parent=gene-AD853_RS19200;Dbxref=GenBank:WP_038825662.1;Name=WP_038825662.1;Ontology_term=GO:0009245,GO:0008915;gbkey=CDS;gene=lpxB;go_function=lipid-A-disaccharide synthase activity|0008915||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016678507.1;locus_tag=AD853_RS19200;product=lipid-A-disaccharide synthase;protein_id=WP_038825662.1;transl_table=11 NZ_CPUY01000034.1 RefSeq gene 9877 10473 . + . ID=gene-AD853_RS19205;Name=rnhB;gbkey=Gene;gene=rnhB;gene_biotype=protein_coding;locus_tag=AD853_RS19205;old_locus_tag=ERS008462_03869 NZ_CPUY01000034.1 Protein Homology CDS 9877 10473 . + 0 ID=cds-WP_002212145.1;Parent=gene-AD853_RS19205;Dbxref=GenBank:WP_002212145.1;Name=WP_002212145.1;Ontology_term=GO:0003723,GO:0004523;gbkey=CDS;gene=rnhB;go_function=RNA binding|0003723||IEA,RNA-DNA hybrid ribonuclease activity|0004523||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212145.1;locus_tag=AD853_RS19205;product=ribonuclease HII;protein_id=WP_002212145.1;transl_table=11 NZ_CPUY01000034.1 RefSeq gene 10636 14118 . + . ID=gene-AD853_RS19210;Name=dnaE;gbkey=Gene;gene=dnaE;gene_biotype=protein_coding;locus_tag=AD853_RS19210;old_locus_tag=ERS008462_03870 NZ_CPUY01000034.1 Protein Homology CDS 10636 14118 . + 0 ID=cds-WP_038823681.1;Parent=gene-AD853_RS19210;Dbxref=GenBank:WP_038823681.1;Name=WP_038823681.1;Ontology_term=GO:0006260,GO:0003676,GO:0008408;gbkey=CDS;gene=dnaE;go_function=nucleic acid binding|0003676||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308213.1;locus_tag=AD853_RS19210;product=DNA polymerase III subunit alpha;protein_id=WP_038823681.1;transl_table=11 NZ_CPUY01000034.1 RefSeq gene 14131 15090 . + . ID=gene-AD853_RS19215;Name=accA;gbkey=Gene;gene=accA;gene_biotype=protein_coding;locus_tag=AD853_RS19215;old_locus_tag=ERS008462_03871 NZ_CPUY01000034.1 Protein Homology CDS 14131 15090 . + 0 ID=cds-WP_002212147.1;Parent=gene-AD853_RS19215;Dbxref=GenBank:WP_002212147.1;Name=WP_002212147.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;gene=accA;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019455765.1;locus_tag=AD853_RS19215;product=acetyl-CoA carboxylase carboxyl transferase subunit alpha;protein_id=WP_002212147.1;transl_table=11 NZ_CPUY01000034.1 RefSeq gene 15274 15672 . + . ID=gene-AD853_RS19220;Name=AD853_RS19220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS19220;old_locus_tag=ERS008462_03872 NZ_CPUY01000034.1 Protein Homology CDS 15274 15672 . + 0 ID=cds-WP_002212148.1;Parent=gene-AD853_RS19220;Dbxref=GenBank:WP_002212148.1;Name=WP_002212148.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212148.1;locus_tag=AD853_RS19220;product=VOC family protein;protein_id=WP_002212148.1;transl_table=11 NZ_CPUY01000034.1 RefSeq gene 15674 17056 . + . ID=gene-AD853_RS19225;Name=tilS;gbkey=Gene;gene=tilS;gene_biotype=protein_coding;locus_tag=AD853_RS19225;old_locus_tag=ERS008462_03873 NZ_CPUY01000034.1 Protein Homology CDS 15674 17056 . + 0 ID=cds-WP_012303761.1;Parent=gene-AD853_RS19225;Dbxref=GenBank:WP_012303761.1;Name=WP_012303761.1;Ontology_term=GO:0008033,GO:0000166,GO:0005524,GO:0016879;gbkey=CDS;gene=tilS;go_function=nucleotide binding|0000166||IEA,ATP binding|0005524||IEA,ligase activity%2C forming carbon-nitrogen bonds|0016879||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212149.1;locus_tag=AD853_RS19225;product=tRNA lysidine(34) synthetase TilS;protein_id=WP_012303761.1;transl_table=11 NZ_CPUY01000034.1 RefSeq gene 17312 17629 . + . ID=gene-AD853_RS19230;Name=AD853_RS19230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS19230;old_locus_tag=ERS008462_03874 NZ_CPUY01000034.1 Protein Homology CDS 17312 17629 . + 0 ID=cds-WP_002212150.1;Parent=gene-AD853_RS19230;Dbxref=GenBank:WP_002212150.1;Name=WP_002212150.1;Ontology_term=GO:0009055,GO:0020037,GO:0046872;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212150.1;locus_tag=AD853_RS19230;product=c-type cytochrome;protein_id=WP_002212150.1;transl_table=11 NZ_CPUY01000034.1 RefSeq gene 17883 18143 . - . ID=gene-AD853_RS19235;Name=rof;gbkey=Gene;gene=rof;gene_biotype=protein_coding;locus_tag=AD853_RS19235;old_locus_tag=ERS008462_03875 NZ_CPUY01000034.1 Protein Homology CDS 17883 18143 . - 0 ID=cds-WP_002218374.1;Parent=gene-AD853_RS19235;Dbxref=GenBank:WP_002218374.1;Name=WP_002218374.1;gbkey=CDS;gene=rof;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002218374.1;locus_tag=AD853_RS19235;product=Rho-binding antiterminator;protein_id=WP_002218374.1;transl_table=11 NZ_CPUY01000034.1 RefSeq gene 18130 18330 . - . ID=gene-AD853_RS19240;Name=AD853_RS19240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS19240;old_locus_tag=ERS008462_03876 NZ_CPUY01000034.1 Protein Homology CDS 18130 18330 . - 0 ID=cds-WP_002212152.1;Parent=gene-AD853_RS19240;Dbxref=GenBank:WP_002212152.1;Name=WP_002212152.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012146467.1;locus_tag=AD853_RS19240;product=YaeP family protein;protein_id=WP_002212152.1;transl_table=11 NZ_CPUY01000034.1 RefSeq gene 18572 19120 . + . ID=gene-AD853_RS19245;Name=AD853_RS19245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS19245;old_locus_tag=ERS008462_03877 NZ_CPUY01000034.1 Protein Homology CDS 18572 19120 . + 0 ID=cds-WP_002212153.1;Parent=gene-AD853_RS19245;Dbxref=GenBank:WP_002212153.1;Name=WP_002212153.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212153.1;locus_tag=AD853_RS19245;product=YaeQ family protein;protein_id=WP_002212153.1;transl_table=11 NZ_CPUY01000034.1 RefSeq gene 19123 19539 . + . ID=gene-AD853_RS19250;Name=arfB;gbkey=Gene;gene=arfB;gene_biotype=protein_coding;locus_tag=AD853_RS19250;old_locus_tag=ERS008462_03878 NZ_CPUY01000034.1 Protein Homology CDS 19123 19539 . + 0 ID=cds-WP_038823677.1;Parent=gene-AD853_RS19250;Dbxref=GenBank:WP_038823677.1;Name=WP_038823677.1;Ontology_term=GO:0006415,GO:0003747;gbkey=CDS;gene=arfB;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004704311.1;locus_tag=AD853_RS19250;product=alternative ribosome rescue aminoacyl-tRNA hydrolase ArfB;protein_id=WP_038823677.1;transl_table=11 NZ_CPUY01000034.1 RefSeq gene 19624 20307 . + . ID=gene-AD853_RS19255;Name=nlpE;gbkey=Gene;gene=nlpE;gene_biotype=protein_coding;gene_synonym=cutF;locus_tag=AD853_RS19255;old_locus_tag=ERS008462_03879 NZ_CPUY01000034.1 Protein Homology CDS 19624 20307 . + 0 ID=cds-WP_002212155.1;Parent=gene-AD853_RS19255;Dbxref=GenBank:WP_002212155.1;Name=WP_002212155.1;Note=NlpE%2C an outer membrane lipoprotein%2C interacts directly with CpxA%2C the sensor histidine kinase of the Cpx system for response to envelope stress.;gbkey=CDS;gene=nlpE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011906277.1;locus_tag=AD853_RS19255;product=envelope stress response activation lipoprotein NlpE;protein_id=WP_002212155.1;transl_table=11 NZ_CPUY01000034.1 RefSeq gene 20422 22140 . - . ID=gene-AD853_RS19260;Name=proS;gbkey=Gene;gene=proS;gene_biotype=protein_coding;locus_tag=AD853_RS19260;old_locus_tag=ERS008462_03880 NZ_CPUY01000034.1 Protein Homology CDS 20422 22140 . - 0 ID=cds-WP_038823676.1;Parent=gene-AD853_RS19260;Dbxref=GenBank:WP_038823676.1;Name=WP_038823676.1;Ontology_term=GO:0006433,GO:0004827,GO:0005524,GO:0005737;gbkey=CDS;gene=proS;go_component=cytoplasm|0005737||IEA;go_function=proline-tRNA ligase activity|0004827||IEA,ATP binding|0005524||IEA;go_process=prolyl-tRNA aminoacylation|0006433||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005163997.1;locus_tag=AD853_RS19260;product=proline--tRNA ligase;protein_id=WP_038823676.1;transl_table=11 NZ_CPUY01000034.1 RefSeq gene 22244 22951 . - . ID=gene-AD853_RS19265;Name=tsaA;gbkey=Gene;gene=tsaA;gene_biotype=protein_coding;locus_tag=AD853_RS19265;old_locus_tag=ERS008462_03881 NZ_CPUY01000034.1 Protein Homology CDS 22244 22951 . - 0 ID=cds-WP_002212157.1;Parent=gene-AD853_RS19265;Dbxref=GenBank:WP_002212157.1;Name=WP_002212157.1;Ontology_term=GO:0006400,GO:0008757,GO:0005737;gbkey=CDS;gene=tsaA;go_component=cytoplasm|0005737||IEA;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212157.1;locus_tag=AD853_RS19265;product=tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO;protein_id=WP_002212157.1;transl_table=11 NZ_CPUY01000034.1 RefSeq gene 22948 23355 . - . ID=gene-AD853_RS19270;Name=rcsF;gbkey=Gene;gene=rcsF;gene_biotype=protein_coding;locus_tag=AD853_RS19270;old_locus_tag=ERS008462_03882 NZ_CPUY01000034.1 Protein Homology CDS 22948 23355 . - 0 ID=cds-WP_002212158.1;Parent=gene-AD853_RS19270;Dbxref=GenBank:WP_002212158.1;Name=WP_002212158.1;gbkey=CDS;gene=rcsF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212158.1;locus_tag=AD853_RS19270;product=Rcs stress response system protein RcsF;protein_id=WP_002212158.1;transl_table=11 NZ_CPUY01000034.1 RefSeq gene 23473 24288 . - . ID=gene-AD853_RS19275;Name=AD853_RS19275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS19275;old_locus_tag=ERS008462_03883 NZ_CPUY01000034.1 Protein Homology CDS 23473 24288 . - 0 ID=cds-WP_038823675.1;Parent=gene-AD853_RS19275;Dbxref=GenBank:WP_038823675.1;Name=WP_038823675.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016534993.1;locus_tag=AD853_RS19275;product=MetQ/NlpA family lipoprotein;protein_id=WP_038823675.1;transl_table=11 NZ_CPUY01000034.1 RefSeq gene 24352 25005 . - . ID=gene-AD853_RS19280;Name=AD853_RS19280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS19280;old_locus_tag=ERS008462_03884 NZ_CPUY01000034.1 Protein Homology CDS 24352 25005 . - 0 ID=cds-WP_002212160.1;Parent=gene-AD853_RS19280;Dbxref=GenBank:WP_002212160.1;Name=WP_002212160.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132073.1;locus_tag=AD853_RS19280;product=methionine ABC transporter permease MetI;protein_id=WP_002212160.1;transl_table=11 NZ_CPUY01000034.1 RefSeq gene 24998 26029 . - . ID=gene-AD853_RS19285;Name=metN;gbkey=Gene;gene=metN;gene_biotype=protein_coding;locus_tag=AD853_RS19285;old_locus_tag=ERS008462_03885 NZ_CPUY01000034.1 Protein Homology CDS 24998 26029 . - 0 ID=cds-WP_002212161.1;Parent=gene-AD853_RS19285;Dbxref=GenBank:WP_002212161.1;Name=WP_002212161.1;Ontology_term=GO:0048473,GO:0005524,GO:0033232,GO:0009276;gbkey=CDS;gene=metN;go_component=Gram-negative-bacterium-type cell wall|0009276||IEA;go_function=ATP binding|0005524||IEA,ABC-type D-methionine transporter activity|0033232||IEA;go_process=D-methionine transmembrane transport|0048473||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308228.1;locus_tag=AD853_RS19285;product=methionine ABC transporter ATP-binding protein MetN;protein_id=WP_002212161.1;transl_table=11 NZ_CPUY01000034.1 RefSeq gene 26216 26782 . + . ID=gene-AD853_RS19290;Name=gmhB;gbkey=Gene;gene=gmhB;gene_biotype=protein_coding;locus_tag=AD853_RS19290;old_locus_tag=ERS008462_03886 NZ_CPUY01000034.1 Protein Homology CDS 26216 26782 . + 0 ID=cds-WP_002220062.1;Parent=gene-AD853_RS19290;Dbxref=GenBank:WP_002220062.1;Name=WP_002220062.1;Ontology_term=GO:0005975,GO:0016791;gbkey=CDS;gene=gmhB;go_function=phosphatase activity|0016791||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015683885.1;locus_tag=AD853_RS19290;product=D-glycero-beta-D-manno-heptose 1%2C7-bisphosphate 7-phosphatase;protein_id=WP_002220062.1;transl_table=11 ##sequence-region NZ_CPUY01000035.1 1 26137 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=633 NZ_CPUY01000035.1 RefSeq region 1 26137 . + . ID=NZ_CPUY01000035.1:1..26137;Dbxref=taxon:633;collection-date=1900/2008;country=South Africa;gbkey=Src;genome=genomic;isolation-source=not known;mol_type=genomic DNA;nat-host=pig;serovar=O:3;strain=IP32544 NZ_CPUY01000035.1 RefSeq gene 226 705 . - . ID=gene-AD853_RS19295;Name=AD853_RS19295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS19295;old_locus_tag=ERS008462_03887 NZ_CPUY01000035.1 Protein Homology CDS 226 705 . - 0 ID=cds-WP_011192795.1;Parent=gene-AD853_RS19295;Dbxref=GenBank:WP_011192795.1;Name=WP_011192795.1;Ontology_term=GO:0033103;gbkey=CDS;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192795.1;locus_tag=AD853_RS19295;product=Hcp family type VI secretion system effector;protein_id=WP_011192795.1;transl_table=11 NZ_CPUY01000035.1 RefSeq gene 729 1124 . - . ID=gene-AD853_RS19300;Name=AD853_RS19300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS19300;old_locus_tag=ERS008462_03888 NZ_CPUY01000035.1 Protein Homology CDS 729 1124 . - 0 ID=cds-WP_025380842.1;Parent=gene-AD853_RS19300;Dbxref=GenBank:WP_025380842.1;Name=WP_025380842.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002216980.1;locus_tag=AD853_RS19300;product=DUF1240 domain-containing protein;protein_id=WP_025380842.1;transl_table=11 NZ_CPUY01000035.1 RefSeq gene 1186 1581 . - . ID=gene-AD853_RS19305;Name=AD853_RS19305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS19305;old_locus_tag=ERS008462_03889 NZ_CPUY01000035.1 Protein Homology CDS 1186 1581 . - 0 ID=cds-WP_011192792.1;Parent=gene-AD853_RS19305;Dbxref=GenBank:WP_011192792.1;Name=WP_011192792.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002216979.1;locus_tag=AD853_RS19305;product=DUF1240 domain-containing protein;protein_id=WP_011192792.1;transl_table=11 NZ_CPUY01000035.1 RefSeq gene 1645 2040 . - . ID=gene-AD853_RS19310;Name=AD853_RS19310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS19310;old_locus_tag=ERS008462_03890 NZ_CPUY01000035.1 Protein Homology CDS 1645 2040 . - 0 ID=cds-WP_002216980.1;Parent=gene-AD853_RS19310;Dbxref=GenBank:WP_002216980.1;Name=WP_002216980.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002216980.1;locus_tag=AD853_RS19310;product=DUF1240 domain-containing protein;protein_id=WP_002216980.1;transl_table=11 NZ_CPUY01000035.1 RefSeq gene 2037 2672 . - . ID=gene-AD853_RS19315;Name=AD853_RS19315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS19315;old_locus_tag=ERS008462_03891 NZ_CPUY01000035.1 Protein Homology CDS 2037 2672 . - 0 ID=cds-WP_002209805.1;Parent=gene-AD853_RS19315;Dbxref=GenBank:WP_002209805.1;Name=WP_002209805.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209805.1;locus_tag=AD853_RS19315;product=hypothetical protein;protein_id=WP_002209805.1;transl_table=11 NZ_CPUY01000035.1 RefSeq gene 3414 4277 . + . ID=gene-AD853_RS22555;Name=AD853_RS22555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS22555;old_locus_tag=ERS008462_03892 NZ_CPUY01000035.1 GeneMarkS-2+ CDS 3414 4277 . + 0 ID=cds-WP_317889197.1;Parent=gene-AD853_RS22555;Dbxref=GenBank:WP_317889197.1;Name=WP_317889197.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AD853_RS22555;product=hypothetical protein;protein_id=WP_317889197.1;transl_table=11 NZ_CPUY01000035.1 RefSeq gene 4207 5232 . + . ID=gene-AD853_RS22560;Name=AD853_RS22560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS22560;old_locus_tag=ERS008462_03893 NZ_CPUY01000035.1 GeneMarkS-2+ CDS 4207 5232 . + 0 ID=cds-WP_317889196.1;Parent=gene-AD853_RS22560;Dbxref=GenBank:WP_317889196.1;Name=WP_317889196.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AD853_RS22560;product=hypothetical protein;protein_id=WP_317889196.1;transl_table=11 NZ_CPUY01000035.1 RefSeq gene 5475 5951 . - . ID=gene-AD853_RS19325;Name=AD853_RS19325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS19325;old_locus_tag=ERS008462_03894 NZ_CPUY01000035.1 Protein Homology CDS 5475 5951 . - 0 ID=cds-WP_038824123.1;Parent=gene-AD853_RS19325;Dbxref=GenBank:WP_038824123.1;Name=WP_038824123.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209803.1;locus_tag=AD853_RS19325;product=DUF943 family protein;protein_id=WP_038824123.1;transl_table=11 NZ_CPUY01000035.1 cmsearch riboswitch 6244 6348 . + . ID=id-NZ_CPUY01000035.1:6244..6348;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_CPUY01000035.1 RefSeq gene 6472 7272 . + . ID=gene-AD853_RS19330;Name=thiD;gbkey=Gene;gene=thiD;gene_biotype=protein_coding;locus_tag=AD853_RS19330;old_locus_tag=ERS008462_03896 NZ_CPUY01000035.1 Protein Homology CDS 6472 7272 . + 0 ID=cds-WP_050124665.1;Parent=gene-AD853_RS19330;Dbxref=GenBank:WP_050124665.1;Name=WP_050124665.1;Ontology_term=GO:0009228,GO:0008902,GO:0008972;gbkey=CDS;gene=thiD;go_function=hydroxymethylpyrimidine kinase activity|0008902||IEA,phosphomethylpyrimidine kinase activity|0008972||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005191877.1;locus_tag=AD853_RS19330;product=bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase;protein_id=WP_050124665.1;transl_table=11 NZ_CPUY01000035.1 RefSeq gene 7300 8220 . - . ID=gene-AD853_RS19335;Name=AD853_RS19335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS19335;old_locus_tag=ERS008462_03897 NZ_CPUY01000035.1 Protein Homology CDS 7300 8220 . - 0 ID=cds-WP_038824113.1;Parent=gene-AD853_RS19335;Dbxref=GenBank:WP_038824113.1;Name=WP_038824113.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012104817.1;locus_tag=AD853_RS19335;product=hypothetical protein;protein_id=WP_038824113.1;transl_table=11 NZ_CPUY01000035.1 RefSeq gene 8451 8960 . + . ID=gene-AD853_RS19340;Name=AD853_RS19340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS19340;old_locus_tag=ERS008462_03898 NZ_CPUY01000035.1 Protein Homology CDS 8451 8960 . + 0 ID=cds-WP_038824115.1;Parent=gene-AD853_RS19340;Dbxref=GenBank:WP_038824115.1;Name=WP_038824115.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016583131.1;locus_tag=AD853_RS19340;product=inhibitor of vertebrate lysozyme family protein;protein_id=WP_038824115.1;transl_table=11 NZ_CPUY01000035.1 RefSeq gene 9247 10137 . - . ID=gene-AD853_RS19345;Name=yegS;gbkey=Gene;gene=yegS;gene_biotype=protein_coding;locus_tag=AD853_RS19345;old_locus_tag=ERS008462_03899 NZ_CPUY01000035.1 Protein Homology CDS 9247 10137 . - 0 ID=cds-WP_002209799.1;Parent=gene-AD853_RS19345;Dbxref=GenBank:WP_002209799.1;Name=WP_002209799.1;Ontology_term=GO:0001727,GO:0046872;gbkey=CDS;gene=yegS;go_function=lipid kinase activity|0001727||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209799.1;locus_tag=AD853_RS19345;product=lipid kinase YegS;protein_id=WP_002209799.1;transl_table=11 NZ_CPUY01000035.1 RefSeq gene 10773 12167 . - . ID=gene-AD853_RS19350;Name=trhP;gbkey=Gene;gene=trhP;gene_biotype=protein_coding;gene_synonym=yegQ;locus_tag=AD853_RS19350;old_locus_tag=ERS008462_03901 NZ_CPUY01000035.1 Protein Homology CDS 10773 12167 . - 0 ID=cds-WP_002209798.1;Parent=gene-AD853_RS19350;Dbxref=GenBank:WP_002209798.1;Name=WP_002209798.1;Ontology_term=GO:0006400;gbkey=CDS;gene=trhP;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209798.1;locus_tag=AD853_RS19350;product=prephenate-dependent tRNA uridine(34) hydroxylase TrhP;protein_id=WP_002209798.1;transl_table=11 NZ_CPUY01000035.1 RefSeq gene 12442 12780 . - . ID=gene-AD853_RS19355;Name=AD853_RS19355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS19355;old_locus_tag=ERS008462_03902 NZ_CPUY01000035.1 Protein Homology CDS 12442 12780 . - 0 ID=cds-WP_002209797.1;Parent=gene-AD853_RS19355;Dbxref=GenBank:WP_002209797.1;Name=WP_002209797.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209797.1;locus_tag=AD853_RS19355;product=YegP family protein;protein_id=WP_002209797.1;transl_table=11 NZ_CPUY01000035.1 RefSeq gene 12917 13636 . - . ID=gene-AD853_RS19360;Name=baeR;gbkey=Gene;gene=baeR;gene_biotype=protein_coding;locus_tag=AD853_RS19360;old_locus_tag=ERS008462_03903 NZ_CPUY01000035.1 Protein Homology CDS 12917 13636 . - 0 ID=cds-WP_038824118.1;Parent=gene-AD853_RS19360;Dbxref=GenBank:WP_038824118.1;Name=WP_038824118.1;Ontology_term=GO:0000160,GO:2000142,GO:0003700;gbkey=CDS;gene=baeR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription initiation|2000142||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002216825.1;locus_tag=AD853_RS19360;product=envelope stress response regulator BaeR;protein_id=WP_038824118.1;transl_table=11 NZ_CPUY01000035.1 RefSeq gene 13646 15028 . - . ID=gene-AD853_RS19365;Name=baeS;gbkey=Gene;gene=baeS;gene_biotype=protein_coding;locus_tag=AD853_RS19365;old_locus_tag=ERS008462_03904 NZ_CPUY01000035.1 Protein Homology CDS 13646 15028 . - 0 ID=cds-WP_050124666.1;Parent=gene-AD853_RS19365;Dbxref=GenBank:WP_050124666.1;Name=WP_050124666.1;Ontology_term=GO:0007165,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=baeS;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004877329.1;locus_tag=AD853_RS19365;product=envelope stress sensor histidine kinase BaeS;protein_id=WP_050124666.1;transl_table=11 NZ_CPUY01000035.1 RefSeq gene 15062 16459 . - . ID=gene-AD853_RS19370;Name=mdtD;gbkey=Gene;gene=mdtD;gene_biotype=protein_coding;locus_tag=AD853_RS19370;old_locus_tag=ERS008462_03905 NZ_CPUY01000035.1 Protein Homology CDS 15062 16459 . - 0 ID=cds-WP_002209795.1;Parent=gene-AD853_RS19370;Dbxref=GenBank:WP_002209795.1;Name=WP_002209795.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=mdtD;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002265210.1;locus_tag=AD853_RS19370;product=MFS transporter;protein_id=WP_002209795.1;transl_table=11 NZ_CPUY01000035.1 RefSeq gene 16493 19567 . - . ID=gene-AD853_RS19375;Name=mdtC;gbkey=Gene;gene=mdtC;gene_biotype=protein_coding;locus_tag=AD853_RS19375;old_locus_tag=ERS008462_03906 NZ_CPUY01000035.1 Protein Homology CDS 16493 19567 . - 0 ID=cds-WP_011192783.1;Parent=gene-AD853_RS19375;Dbxref=GenBank:WP_011192783.1;Name=WP_011192783.1;Ontology_term=GO:0055085;gbkey=CDS;gene=mdtC;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011815800.1;locus_tag=AD853_RS19375;product=multidrug efflux RND transporter permease subunit MdtC;protein_id=WP_011192783.1;transl_table=11 NZ_CPUY01000035.1 RefSeq gene 19564 22722 . - . ID=gene-AD853_RS19380;Name=AD853_RS19380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS19380;old_locus_tag=ERS008462_03907 NZ_CPUY01000035.1 Protein Homology CDS 19564 22722 . - 0 ID=cds-WP_011192782.1;Parent=gene-AD853_RS19380;Dbxref=GenBank:WP_011192782.1;Name=WP_011192782.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002401170.1;locus_tag=AD853_RS19380;product=MdtB/MuxB family multidrug efflux RND transporter permease subunit;protein_id=WP_011192782.1;transl_table=11 NZ_CPUY01000035.1 RefSeq gene 22722 24056 . - . ID=gene-AD853_RS19385;Name=AD853_RS19385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS19385;old_locus_tag=ERS008462_03908 NZ_CPUY01000035.1 Protein Homology CDS 22722 24056 . - 0 ID=cds-WP_002214676.1;Parent=gene-AD853_RS19385;Dbxref=GenBank:WP_002214676.1;Name=WP_002214676.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002214676.1;locus_tag=AD853_RS19385;product=MdtA/MuxA family multidrug efflux RND transporter periplasmic adaptor subunit;protein_id=WP_002214676.1;transl_table=11 NZ_CPUY01000035.1 RefSeq gene 24444 25529 . - . ID=gene-AD853_RS19390;Name=AD853_RS19390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS19390;old_locus_tag=ERS008462_03909 NZ_CPUY01000035.1 Protein Homology CDS 24444 25529 . - 0 ID=cds-WP_038824121.1;Parent=gene-AD853_RS19390;Dbxref=GenBank:WP_038824121.1;Name=WP_038824121.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192780.1;locus_tag=AD853_RS19390;product=ABC transporter ATP-binding protein;protein_id=WP_038824121.1;transl_table=11 NZ_CPUY01000035.1 RefSeq pseudogene 25912 26073 . - . ID=gene-AD853_RS21170;Name=AD853_RS21170;end_range=26073,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD853_RS21170;partial=true;pseudo=true NZ_CPUY01000035.1 Protein Homology CDS 25912 26073 . - 0 ID=cds-AD853_RS21170;Parent=gene-AD853_RS21170;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=26073,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012303864.1;locus_tag=AD853_RS21170;partial=true;product=MocR-like pyridoxine biosynthesis transcription factor PdxR;pseudo=true;transl_table=11 ##sequence-region NZ_CPUY01000036.1 1 25025 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=633 NZ_CPUY01000036.1 RefSeq region 1 25025 . + . ID=NZ_CPUY01000036.1:1..25025;Dbxref=taxon:633;collection-date=1900/2008;country=South Africa;gbkey=Src;genome=genomic;isolation-source=not known;mol_type=genomic DNA;nat-host=pig;serovar=O:3;strain=IP32544 NZ_CPUY01000036.1 RefSeq gene 1 404 . - . ID=gene-AD853_RS19395;Name=AD853_RS19395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS19395;partial=true;start_range=.,1 NZ_CPUY01000036.1 Protein Homology CDS 1 404 . - 0 ID=cds-WP_155406238.1;Parent=gene-AD853_RS19395;Dbxref=GenBank:WP_155406238.1;Name=WP_155406238.1;Ontology_term=GO:0003676,GO:0005524;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015683569.1;locus_tag=AD853_RS19395;partial=true;product=DEAD/DEAH box helicase;protein_id=WP_155406238.1;start_range=.,1;transl_table=11 NZ_CPUY01000036.1 RefSeq gene 795 1505 . + . ID=gene-AD853_RS19400;Name=AD853_RS19400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS19400;old_locus_tag=ERS008462_03910 NZ_CPUY01000036.1 Protein Homology CDS 795 1505 . + 0 ID=cds-WP_002220154.1;Parent=gene-AD853_RS19400;Dbxref=GenBank:WP_002220154.1;Name=WP_002220154.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002220154.1;locus_tag=AD853_RS19400;product=transcriptional regulator;protein_id=WP_002220154.1;transl_table=11 NZ_CPUY01000036.1 RefSeq gene 1557 2543 . + . ID=gene-AD853_RS19405;Name=hlyD;gbkey=Gene;gene=hlyD;gene_biotype=protein_coding;locus_tag=AD853_RS19405;old_locus_tag=ERS008462_03911 NZ_CPUY01000036.1 Protein Homology CDS 1557 2543 . + 0 ID=cds-WP_002220156.1;Parent=gene-AD853_RS19405;Dbxref=GenBank:WP_002220156.1;Name=WP_002220156.1;gbkey=CDS;gene=hlyD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011191973.1;locus_tag=AD853_RS19405;product=secretion protein HlyD;protein_id=WP_002220156.1;transl_table=11 NZ_CPUY01000036.1 RefSeq gene 2557 4299 . + . ID=gene-AD853_RS19410;Name=AD853_RS19410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS19410;old_locus_tag=ERS008462_03912 NZ_CPUY01000036.1 Protein Homology CDS 2557 4299 . + 0 ID=cds-WP_038824126.1;Parent=gene-AD853_RS19410;Dbxref=GenBank:WP_038824126.1;Name=WP_038824126.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011191972.1;locus_tag=AD853_RS19410;product=ATP-binding cassette domain-containing protein;protein_id=WP_038824126.1;transl_table=11 NZ_CPUY01000036.1 RefSeq gene 4304 5479 . + . ID=gene-AD853_RS19415;Name=AD853_RS19415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS19415;old_locus_tag=ERS008462_03913 NZ_CPUY01000036.1 Protein Homology CDS 4304 5479 . + 0 ID=cds-WP_024063409.1;Parent=gene-AD853_RS19415;Dbxref=GenBank:WP_024063409.1;Name=WP_024063409.1;Ontology_term=GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304365.1;locus_tag=AD853_RS19415;product=ABC transporter permease;protein_id=WP_024063409.1;transl_table=11 NZ_CPUY01000036.1 RefSeq gene 5492 6598 . + . ID=gene-AD853_RS19420;Name=AD853_RS19420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS19420;old_locus_tag=ERS008462_03914 NZ_CPUY01000036.1 Protein Homology CDS 5492 6598 . + 0 ID=cds-WP_038824127.1;Parent=gene-AD853_RS19420;Dbxref=GenBank:WP_038824127.1;Name=WP_038824127.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004713409.1;locus_tag=AD853_RS19420;product=ABC transporter permease;protein_id=WP_038824127.1;transl_table=11 NZ_CPUY01000036.1 RefSeq gene 6637 6963 . - . ID=gene-AD853_RS19425;Name=AD853_RS19425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS19425;old_locus_tag=ERS008462_03915 NZ_CPUY01000036.1 Protein Homology CDS 6637 6963 . - 0 ID=cds-WP_002220163.1;Parent=gene-AD853_RS19425;Dbxref=GenBank:WP_002220163.1;Name=WP_002220163.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304366.1;locus_tag=AD853_RS19425;product=EthD family reductase;protein_id=WP_002220163.1;transl_table=11 NZ_CPUY01000036.1 RefSeq gene 6974 7201 . - . ID=gene-AD853_RS22720;Name=AD853_RS22720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS22720 NZ_CPUY01000036.1 Protein Homology CDS 6974 7201 . - 0 ID=cds-WP_002220165.1;Parent=gene-AD853_RS22720;Dbxref=GenBank:WP_002220165.1;Name=WP_002220165.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002220165.1;locus_tag=AD853_RS22720;product=N5%2CN10-methylene tetrahydromethanopterin reductase;protein_id=WP_002220165.1;transl_table=11 NZ_CPUY01000036.1 RefSeq gene 7533 8444 . + . ID=gene-AD853_RS19435;Name=AD853_RS19435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS19435;old_locus_tag=ERS008462_03916 NZ_CPUY01000036.1 Protein Homology CDS 7533 8444 . + 0 ID=cds-WP_038824129.1;Parent=gene-AD853_RS19435;Dbxref=GenBank:WP_038824129.1;Name=WP_038824129.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001516245.1;locus_tag=AD853_RS19435;product=LysR family transcriptional regulator;protein_id=WP_038824129.1;transl_table=11 NZ_CPUY01000036.1 RefSeq gene 8445 9554 . - . ID=gene-AD853_RS19440;Name=AD853_RS19440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS19440;old_locus_tag=ERS008462_03917 NZ_CPUY01000036.1 Protein Homology CDS 8445 9554 . - 0 ID=cds-WP_012105466.1;Parent=gene-AD853_RS19440;Dbxref=GenBank:WP_012105466.1;Name=WP_012105466.1;Ontology_term=GO:0010181,GO:0016491;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002220169.1;locus_tag=AD853_RS19440;product=alkene reductase;protein_id=WP_012105466.1;transl_table=11 NZ_CPUY01000036.1 RefSeq gene 9902 11266 . - . ID=gene-AD853_RS19445;Name=AD853_RS19445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS19445;old_locus_tag=ERS008462_03918 NZ_CPUY01000036.1 Protein Homology CDS 9902 11266 . - 0 ID=cds-WP_012105467.1;Parent=gene-AD853_RS19445;Dbxref=GenBank:WP_012105467.1;Name=WP_012105467.1;Ontology_term=GO:0006355,GO:0005524,GO:0008134;gbkey=CDS;go_function=ATP binding|0005524||IEA,transcription factor binding|0008134||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105467.1;locus_tag=AD853_RS19445;product=sigma 54-interacting transcriptional regulator;protein_id=WP_012105467.1;transl_table=11 NZ_CPUY01000036.1 RefSeq gene 11253 13067 . - . ID=gene-AD853_RS19450;Name=AD853_RS19450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS19450;old_locus_tag=ERS008462_03919 NZ_CPUY01000036.1 Protein Homology CDS 11253 13067 . - 0 ID=cds-WP_038824130.1;Parent=gene-AD853_RS19450;Dbxref=GenBank:WP_038824130.1;Name=WP_038824130.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002220171.1;locus_tag=AD853_RS19450;product=PAS domain-containing sensor histidine kinase;protein_id=WP_038824130.1;transl_table=11 NZ_CPUY01000036.1 RefSeq gene 13417 13890 . + . ID=gene-AD853_RS19455;Name=AD853_RS19455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS19455;old_locus_tag=ERS008462_03920 NZ_CPUY01000036.1 Protein Homology CDS 13417 13890 . + 0 ID=cds-WP_012105469.1;Parent=gene-AD853_RS19455;Dbxref=GenBank:WP_012105469.1;Name=WP_012105469.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105469.1;locus_tag=AD853_RS19455;product=zinc resistance sensor/chaperone ZraP;protein_id=WP_012105469.1;transl_table=11 NZ_CPUY01000036.1 RefSeq gene 13978 15234 . - . ID=gene-AD853_RS19460;Name=AD853_RS19460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS19460;old_locus_tag=ERS008462_03921 NZ_CPUY01000036.1 Protein Homology CDS 13978 15234 . - 0 ID=cds-WP_038824132.1;Parent=gene-AD853_RS19460;Dbxref=GenBank:WP_038824132.1;Name=WP_038824132.1;Ontology_term=GO:0015858,GO:0005337,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=nucleoside transmembrane transporter activity|0005337||IEA;go_process=nucleoside transport|0015858||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004873600.1;locus_tag=AD853_RS19460;product=nucleoside permease;protein_id=WP_038824132.1;transl_table=11 NZ_CPUY01000036.1 RefSeq gene 15373 16236 . - . ID=gene-AD853_RS19465;Name=xapA;gbkey=Gene;gene=xapA;gene_biotype=protein_coding;locus_tag=AD853_RS19465;old_locus_tag=ERS008462_03922 NZ_CPUY01000036.1 Protein Homology CDS 15373 16236 . - 0 ID=cds-WP_011191966.1;Parent=gene-AD853_RS19465;Dbxref=GenBank:WP_011191966.1;Name=WP_011191966.1;Ontology_term=GO:0055086,GO:0004731,GO:0005737;gbkey=CDS;gene=xapA;go_component=cytoplasm|0005737||IEA;go_function=purine-nucleoside phosphorylase activity|0004731||IEA;go_process=nucleobase-containing small molecule metabolic process|0055086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002214195.1;locus_tag=AD853_RS19465;product=xanthosine phosphorylase;protein_id=WP_011191966.1;transl_table=11 NZ_CPUY01000036.1 RefSeq pseudogene 16582 17420 . + . ID=gene-AD853_RS19470;Name=AD853_RS19470;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD853_RS19470;pseudo=true NZ_CPUY01000036.1 Protein Homology CDS 16582 17420 . + 0 ID=cds-AD853_RS19470;Parent=gene-AD853_RS19470;Note=frameshifted;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004710287.1;locus_tag=AD853_RS19470;product=DMT family transporter;pseudo=true;transl_table=11 NZ_CPUY01000036.1 RefSeq gene 17458 18351 . - . ID=gene-AD853_RS19475;Name=AD853_RS19475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS19475;old_locus_tag=ERS008462_03925 NZ_CPUY01000036.1 Protein Homology CDS 17458 18351 . - 0 ID=cds-WP_038834848.1;Parent=gene-AD853_RS19475;Dbxref=GenBank:WP_038834848.1;Name=WP_038834848.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105471.1;locus_tag=AD853_RS19475;product=LysR family transcriptional regulator;protein_id=WP_038834848.1;transl_table=11 NZ_CPUY01000036.1 RefSeq gene 18582 20630 . - . ID=gene-AD853_RS19480;Name=AD853_RS19480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS19480;old_locus_tag=ERS008462_03926 NZ_CPUY01000036.1 Protein Homology CDS 18582 20630 . - 0 ID=cds-WP_038825197.1;Parent=gene-AD853_RS19480;Dbxref=GenBank:WP_038825197.1;Name=WP_038825197.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002228035.1;locus_tag=AD853_RS19480;product=choline transporter;protein_id=WP_038825197.1;transl_table=11 NZ_CPUY01000036.1 RefSeq gene 20995 21591 . + . ID=gene-AD853_RS19485;Name=betI;gbkey=Gene;gene=betI;gene_biotype=protein_coding;locus_tag=AD853_RS19485;old_locus_tag=ERS008462_03927 NZ_CPUY01000036.1 Protein Homology CDS 20995 21591 . + 0 ID=cds-WP_002218278.1;Parent=gene-AD853_RS19485;Dbxref=GenBank:WP_002218278.1;Name=WP_002218278.1;Ontology_term=GO:0003677;gbkey=CDS;gene=betI;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002218278.1;locus_tag=AD853_RS19485;product=transcriptional regulator BetI;protein_id=WP_002218278.1;transl_table=11 NZ_CPUY01000036.1 RefSeq gene 21649 23121 . + . ID=gene-AD853_RS19490;Name=betB;gbkey=Gene;gene=betB;gene_biotype=protein_coding;locus_tag=AD853_RS19490;old_locus_tag=ERS008462_03928 NZ_CPUY01000036.1 Protein Homology CDS 21649 23121 . + 0 ID=cds-WP_050124667.1;Parent=gene-AD853_RS19490;Dbxref=GenBank:WP_050124667.1;Name=WP_050124667.1;Ontology_term=GO:0019285,GO:0008802,GO:0046872;gbkey=CDS;gene=betB;go_function=betaine-aldehyde dehydrogenase (NAD+) activity|0008802||IEA,metal ion binding|0046872||IEA;go_process=glycine betaine biosynthetic process from choline|0019285||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012005947.1;locus_tag=AD853_RS19490;product=betaine-aldehyde dehydrogenase;protein_id=WP_050124667.1;transl_table=11 NZ_CPUY01000036.1 RefSeq gene 23144 24847 . + . ID=gene-AD853_RS19495;Name=betA;gbkey=Gene;gene=betA;gene_biotype=protein_coding;locus_tag=AD853_RS19495;old_locus_tag=ERS008462_03929 NZ_CPUY01000036.1 Protein Homology CDS 23144 24847 . + 0 ID=cds-WP_038825195.1;Parent=gene-AD853_RS19495;Dbxref=GenBank:WP_038825195.1;Name=WP_038825195.1;Ontology_term=GO:0019285,GO:0008812;gbkey=CDS;gene=betA;go_function=choline dehydrogenase activity|0008812||IEA;go_process=glycine betaine biosynthetic process from choline|0019285||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105474.1;locus_tag=AD853_RS19495;product=choline dehydrogenase;protein_id=WP_038825195.1;transl_table=11 ##sequence-region NZ_CPUY01000037.1 1 23638 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=633 NZ_CPUY01000037.1 RefSeq region 1 23638 . + . ID=NZ_CPUY01000037.1:1..23638;Dbxref=taxon:633;collection-date=1900/2008;country=South Africa;gbkey=Src;genome=genomic;isolation-source=not known;mol_type=genomic DNA;nat-host=pig;serovar=O:3;strain=IP32544 NZ_CPUY01000037.1 RefSeq gene 65 691 . - . ID=gene-AD853_RS19500;Name=upp;gbkey=Gene;gene=upp;gene_biotype=protein_coding;locus_tag=AD853_RS19500;old_locus_tag=ERS008462_03930 NZ_CPUY01000037.1 Protein Homology CDS 65 691 . - 0 ID=cds-WP_002209776.1;Parent=gene-AD853_RS19500;Dbxref=GenBank:WP_002209776.1;Name=WP_002209776.1;Ontology_term=GO:0009116,GO:0004845;gbkey=CDS;gene=upp;go_function=uracil phosphoribosyltransferase activity|0004845||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001295473.1;locus_tag=AD853_RS19500;product=uracil phosphoribosyltransferase;protein_id=WP_002209776.1;transl_table=11 NZ_CPUY01000037.1 RefSeq gene 1088 2131 . + . ID=gene-AD853_RS19505;Name=purM;gbkey=Gene;gene=purM;gene_biotype=protein_coding;locus_tag=AD853_RS19505;old_locus_tag=ERS008462_03931 NZ_CPUY01000037.1 Protein Homology CDS 1088 2131 . + 0 ID=cds-WP_011192770.1;Parent=gene-AD853_RS19505;Dbxref=GenBank:WP_011192770.1;Name=WP_011192770.1;Ontology_term=GO:0006189,GO:0004641;gbkey=CDS;gene=purM;go_function=phosphoribosylformylglycinamidine cyclo-ligase activity|0004641||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004876822.1;locus_tag=AD853_RS19505;product=phosphoribosylformylglycinamidine cyclo-ligase;protein_id=WP_011192770.1;transl_table=11 NZ_CPUY01000037.1 RefSeq gene 2246 2884 . + . ID=gene-AD853_RS19510;Name=purN;gbkey=Gene;gene=purN;gene_biotype=protein_coding;locus_tag=AD853_RS19510;old_locus_tag=ERS008462_03932 NZ_CPUY01000037.1 Protein Homology CDS 2246 2884 . + 0 ID=cds-WP_011192771.1;Parent=gene-AD853_RS19510;Dbxref=GenBank:WP_011192771.1;Name=WP_011192771.1;Ontology_term=GO:0006189,GO:0004644;gbkey=CDS;gene=purN;go_function=phosphoribosylglycinamide formyltransferase activity|0004644||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004391279.1;locus_tag=AD853_RS19510;product=phosphoribosylglycinamide formyltransferase;protein_id=WP_011192771.1;transl_table=11 NZ_CPUY01000037.1 RefSeq gene 3113 3658 . + . ID=gene-AD853_RS19515;Name=speG;gbkey=Gene;gene=speG;gene_biotype=protein_coding;locus_tag=AD853_RS19515;old_locus_tag=ERS008462_03933 NZ_CPUY01000037.1 Protein Homology CDS 3113 3658 . + 0 ID=cds-WP_002209779.1;Parent=gene-AD853_RS19515;Dbxref=GenBank:WP_002209779.1;Name=WP_002209779.1;Ontology_term=GO:0008080;gbkey=CDS;gene=speG;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209779.1;locus_tag=AD853_RS19515;product=spermidine N1-acetyltransferase;protein_id=WP_002209779.1;transl_table=11 NZ_CPUY01000037.1 RefSeq gene 3752 4945 . - . ID=gene-AD853_RS21175;Name=fliB;gbkey=Gene;gene=fliB;gene_biotype=protein_coding;locus_tag=AD853_RS21175;old_locus_tag=ERS008462_03934 NZ_CPUY01000037.1 Protein Homology CDS 3752 4945 . - 0 ID=cds-WP_071990067.1;Parent=gene-AD853_RS21175;Dbxref=GenBank:WP_071990067.1;Name=WP_071990067.1;gbkey=CDS;gene=fliB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012303870.1;locus_tag=AD853_RS21175;product=flagellin lysine-N-methylase;protein_id=WP_071990067.1;transl_table=11 NZ_CPUY01000037.1 RefSeq gene 5145 5957 . - . ID=gene-AD853_RS19525;Name=pstB;gbkey=Gene;gene=pstB;gene_biotype=protein_coding;locus_tag=AD853_RS19525;old_locus_tag=ERS008462_03935 NZ_CPUY01000037.1 Protein Homology CDS 5145 5957 . - 0 ID=cds-WP_002209780.1;Parent=gene-AD853_RS19525;Dbxref=GenBank:WP_002209780.1;Name=WP_002209780.1;Ontology_term=GO:0006817,GO:0005524,GO:0015415,GO:0009898,GO:0055052;gbkey=CDS;gene=pstB;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled phosphate ion transmembrane transporter activity|0015415||IEA;go_process=phosphate ion transport|0006817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016585461.1;locus_tag=AD853_RS19525;product=phosphate ABC transporter ATP-binding protein PstB;protein_id=WP_002209780.1;transl_table=11 NZ_CPUY01000037.1 RefSeq gene 5985 7697 . - . ID=gene-AD853_RS19530;Name=pstA;gbkey=Gene;gene=pstA;gene_biotype=protein_coding;locus_tag=AD853_RS19530;old_locus_tag=ERS008462_03936 NZ_CPUY01000037.1 Protein Homology CDS 5985 7697 . - 0 ID=cds-WP_002214668.1;Parent=gene-AD853_RS19530;Dbxref=GenBank:WP_002214668.1;Name=WP_002214668.1;Ontology_term=GO:0006817,GO:0015415,GO:0005886,GO:0055052;gbkey=CDS;gene=pstA;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled phosphate ion transmembrane transporter activity|0015415||IEA;go_process=phosphate ion transport|0006817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192773.1;locus_tag=AD853_RS19530;product=phosphate ABC transporter permease PstA;protein_id=WP_002214668.1;transl_table=11 NZ_CPUY01000037.1 RefSeq gene 7697 9928 . - . ID=gene-AD853_RS19535;Name=AD853_RS19535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS19535;old_locus_tag=ERS008462_03937 NZ_CPUY01000037.1 Protein Homology CDS 7697 9928 . - 0 ID=cds-WP_038824437.1;Parent=gene-AD853_RS19535;Dbxref=GenBank:WP_038824437.1;Name=WP_038824437.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012413846.1;locus_tag=AD853_RS19535;product=ABC transporter permease subunit;protein_id=WP_038824437.1;transl_table=11 NZ_CPUY01000037.1 RefSeq gene 10186 12249 . + . ID=gene-AD853_RS19540;Name=ppk1;gbkey=Gene;gene=ppk1;gene_biotype=protein_coding;locus_tag=AD853_RS19540;old_locus_tag=ERS008462_03938 NZ_CPUY01000037.1 Protein Homology CDS 10186 12249 . + 0 ID=cds-WP_038824439.1;Parent=gene-AD853_RS19540;Dbxref=GenBank:WP_038824439.1;Name=WP_038824439.1;Ontology_term=GO:0006799,GO:0008976,GO:0009358;gbkey=CDS;gene=ppk1;go_component=polyphosphate kinase complex|0009358||IEA;go_function=polyphosphate kinase activity|0008976||IEA;go_process=polyphosphate biosynthetic process|0006799||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004707808.1;locus_tag=AD853_RS19540;product=polyphosphate kinase 1;protein_id=WP_038824439.1;transl_table=11 NZ_CPUY01000037.1 RefSeq gene 12260 13819 . + . ID=gene-AD853_RS19545;Name=ppx;gbkey=Gene;gene=ppx;gene_biotype=protein_coding;locus_tag=AD853_RS19545;old_locus_tag=ERS008462_03939 NZ_CPUY01000037.1 Protein Homology CDS 12260 13819 . + 0 ID=cds-WP_002209783.1;Parent=gene-AD853_RS19545;Dbxref=GenBank:WP_002209783.1;Name=WP_002209783.1;Ontology_term=GO:0006798,GO:0000287,GO:0004309;gbkey=CDS;gene=ppx;go_function=magnesium ion binding|0000287||IEA,exopolyphosphatase activity|0004309||IEA;go_process=polyphosphate catabolic process|0006798||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209783.1;locus_tag=AD853_RS19545;product=exopolyphosphatase;protein_id=WP_002209783.1;transl_table=11 NZ_CPUY01000037.1 RefSeq gene 13987 14175 . + . ID=gene-AD853_RS19550;Name=AD853_RS19550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS19550 NZ_CPUY01000037.1 Protein Homology CDS 13987 14175 . + 0 ID=cds-WP_012303868.1;Parent=gene-AD853_RS19550;Dbxref=GenBank:WP_012303868.1;Name=WP_012303868.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005162154.1;locus_tag=AD853_RS19550;product=YfgG family protein;protein_id=WP_012303868.1;transl_table=11 NZ_CPUY01000037.1 RefSeq gene 14227 15702 . + . ID=gene-AD853_RS19555;Name=mgtE;gbkey=Gene;gene=mgtE;gene_biotype=protein_coding;locus_tag=AD853_RS19555;old_locus_tag=ERS008462_03940 NZ_CPUY01000037.1 Protein Homology CDS 14227 15702 . + 0 ID=cds-WP_002209784.1;Parent=gene-AD853_RS19555;Dbxref=GenBank:WP_002209784.1;Name=WP_002209784.1;Ontology_term=GO:0015693,GO:0015095,GO:0016020;gbkey=CDS;gene=mgtE;go_component=membrane|0016020||IEA;go_function=magnesium ion transmembrane transporter activity|0015095||IEA;go_process=magnesium ion transport|0015693||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005162151.1;locus_tag=AD853_RS19555;product=magnesium transporter;protein_id=WP_002209784.1;transl_table=11 NZ_CPUY01000037.1 RefSeq gene 15842 17194 . + . ID=gene-AD853_RS19560;Name=yegD;gbkey=Gene;gene=yegD;gene_biotype=protein_coding;locus_tag=AD853_RS19560;old_locus_tag=ERS008462_03941 NZ_CPUY01000037.1 Protein Homology CDS 15842 17194 . + 0 ID=cds-WP_012104828.1;Parent=gene-AD853_RS19560;Dbxref=GenBank:WP_012104828.1;Name=WP_012104828.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;gene=yegD;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004717948.1;locus_tag=AD853_RS19560;product=molecular chaperone;protein_id=WP_012104828.1;transl_table=11 NZ_CPUY01000037.1 RefSeq gene 17253 17393 . - . ID=gene-AD853_RS21920;Name=AD853_RS21920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS21920;old_locus_tag=ERS008462_03942 NZ_CPUY01000037.1 Protein Homology CDS 17253 17393 . - 0 ID=cds-WP_012104827.1;Parent=gene-AD853_RS21920;Dbxref=GenBank:WP_012104827.1;Name=WP_012104827.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012104827.1;locus_tag=AD853_RS21920;product=hypothetical protein;protein_id=WP_012104827.1;transl_table=11 NZ_CPUY01000037.1 RefSeq gene 17465 18313 . - . ID=gene-AD853_RS19565;Name=AD853_RS19565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS19565;old_locus_tag=ERS008462_03943 NZ_CPUY01000037.1 Protein Homology CDS 17465 18313 . - 0 ID=cds-WP_002209786.1;Parent=gene-AD853_RS19565;Dbxref=GenBank:WP_002209786.1;Name=WP_002209786.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209786.1;locus_tag=AD853_RS19565;product=ABC transporter permease;protein_id=WP_002209786.1;transl_table=11 NZ_CPUY01000037.1 RefSeq gene 18375 19640 . - . ID=gene-AD853_RS19570;Name=AD853_RS19570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS19570;old_locus_tag=ERS008462_03944 NZ_CPUY01000037.1 Protein Homology CDS 18375 19640 . - 0 ID=cds-WP_038824441.1;Parent=gene-AD853_RS19570;Dbxref=GenBank:WP_038824441.1;Name=WP_038824441.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209787.1;locus_tag=AD853_RS19570;product=ABC transporter permease;protein_id=WP_038824441.1;transl_table=11 NZ_CPUY01000037.1 RefSeq gene 19687 20715 . - . ID=gene-AD853_RS19575;Name=AD853_RS19575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS19575;old_locus_tag=ERS008462_03945 NZ_CPUY01000037.1 Protein Homology CDS 19687 20715 . - 0 ID=cds-WP_012303866.1;Parent=gene-AD853_RS19575;Dbxref=GenBank:WP_012303866.1;Name=WP_012303866.1;Ontology_term=GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012303866.1;locus_tag=AD853_RS19575;product=ABC transporter substrate-binding protein;protein_id=WP_012303866.1;transl_table=11 NZ_CPUY01000037.1 RefSeq gene 20768 22057 . - . ID=gene-AD853_RS19580;Name=AD853_RS19580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS19580;old_locus_tag=ERS008462_03946 NZ_CPUY01000037.1 Protein Homology CDS 20768 22057 . - 0 ID=cds-WP_050124668.1;Parent=gene-AD853_RS19580;Dbxref=GenBank:WP_050124668.1;Name=WP_050124668.1;Ontology_term=GO:0009448,GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;go_process=gamma-aminobutyric acid metabolic process|0009448||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012104823.1;locus_tag=AD853_RS19580;product=4-aminobutyrate--2-oxoglutarate transaminase;protein_id=WP_050124668.1;transl_table=11 NZ_CPUY01000037.1 RefSeq gene 22239 23638 . + . ID=gene-AD853_RS19585;Name=pdxR;end_range=23638,.;gbkey=Gene;gene=pdxR;gene_biotype=protein_coding;locus_tag=AD853_RS19585;partial=true NZ_CPUY01000037.1 Protein Homology CDS 22239 23638 . + 0 ID=cds-WP_050124669.1;Parent=gene-AD853_RS19585;Dbxref=GenBank:WP_050124669.1;Name=WP_050124669.1;Ontology_term=GO:0042823,GO:2000142,GO:0070279;end_range=23638,.;gbkey=CDS;gene=pdxR;go_function=vitamin B6 binding|0070279||IEA;go_process=pyridoxal phosphate biosynthetic process|0042823||IEA,regulation of DNA-templated transcription initiation|2000142||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013577996.1;locus_tag=AD853_RS19585;partial=true;product=MocR-like pyridoxine biosynthesis transcription factor PdxR;protein_id=WP_050124669.1;transl_table=11 ##sequence-region NZ_CPUY01000038.1 1 19478 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=633 NZ_CPUY01000038.1 RefSeq region 1 19478 . + . ID=NZ_CPUY01000038.1:1..19478;Dbxref=taxon:633;collection-date=1900/2008;country=South Africa;gbkey=Src;genome=genomic;isolation-source=not known;mol_type=genomic DNA;nat-host=pig;serovar=O:3;strain=IP32544 NZ_CPUY01000038.1 RefSeq gene 126 1550 . - . ID=gene-AD853_RS19590;Name=lpdA;gbkey=Gene;gene=lpdA;gene_biotype=protein_coding;locus_tag=AD853_RS19590;old_locus_tag=ERS008462_03947 NZ_CPUY01000038.1 Protein Homology CDS 126 1550 . - 0 ID=cds-WP_002209332.1;Parent=gene-AD853_RS19590;Dbxref=GenBank:WP_002209332.1;Name=WP_002209332.1;Ontology_term=GO:0004148,GO:0050660;gbkey=CDS;gene=lpdA;go_function=dihydrolipoyl dehydrogenase (NADH) activity|0004148||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308147.1;locus_tag=AD853_RS19590;product=dihydrolipoyl dehydrogenase;protein_id=WP_002209332.1;transl_table=11 NZ_CPUY01000038.1 RefSeq gene 1841 3415 . - . ID=gene-AD853_RS19595;Name=aceF;gbkey=Gene;gene=aceF;gene_biotype=protein_coding;locus_tag=AD853_RS19595;old_locus_tag=ERS008462_03948 NZ_CPUY01000038.1 Protein Homology CDS 1841 3415 . - 0 ID=cds-WP_011191743.1;Parent=gene-AD853_RS19595;Dbxref=GenBank:WP_011191743.1;Name=WP_011191743.1;Ontology_term=GO:0006096,GO:0004742,GO:0045254;gbkey=CDS;gene=aceF;go_component=pyruvate dehydrogenase complex|0045254||IEA;go_function=dihydrolipoyllysine-residue acetyltransferase activity|0004742||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011191743.1;locus_tag=AD853_RS19595;product=pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase;protein_id=WP_011191743.1;transl_table=11 NZ_CPUY01000038.1 RefSeq gene 3429 6092 . - . ID=gene-AD853_RS19600;Name=aceE;gbkey=Gene;gene=aceE;gene_biotype=protein_coding;locus_tag=AD853_RS19600;old_locus_tag=ERS008462_03949 NZ_CPUY01000038.1 Protein Homology CDS 3429 6092 . - 0 ID=cds-WP_038824516.1;Parent=gene-AD853_RS19600;Dbxref=GenBank:WP_038824516.1;Name=WP_038824516.1;Ontology_term=GO:0006086,GO:0004739,GO:0045254;gbkey=CDS;gene=aceE;go_component=pyruvate dehydrogenase complex|0045254||IEA;go_function=pyruvate dehydrogenase (acetyl-transferring) activity|0004739||IEA;go_process=pyruvate decarboxylation to acetyl-CoA|0006086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008814576.1;locus_tag=AD853_RS19600;product=pyruvate dehydrogenase (acetyl-transferring)%2C homodimeric type;protein_id=WP_038824516.1;transl_table=11 NZ_CPUY01000038.1 RefSeq gene 6288 7052 . - . ID=gene-AD853_RS19605;Name=pdhR;gbkey=Gene;gene=pdhR;gene_biotype=protein_coding;locus_tag=AD853_RS19605;old_locus_tag=ERS008462_03951 NZ_CPUY01000038.1 Protein Homology CDS 6288 7052 . - 0 ID=cds-WP_002216080.1;Parent=gene-AD853_RS19605;Dbxref=GenBank:WP_002216080.1;Name=WP_002216080.1;gbkey=CDS;gene=pdhR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002216080.1;locus_tag=AD853_RS19605;product=pyruvate dehydrogenase complex transcriptional repressor PdhR;protein_id=WP_002216080.1;transl_table=11 NZ_CPUY01000038.1 RefSeq pseudogene 7915 9319 . + . ID=gene-AD853_RS19610;Name=AD853_RS19610;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD853_RS19610;old_locus_tag=ERS008462_03953;pseudo=true NZ_CPUY01000038.1 Protein Homology CDS 7915 9319 . + 0 ID=cds-AD853_RS19610;Parent=gene-AD853_RS19610;Note=frameshifted;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209327.1;locus_tag=AD853_RS19610;product=amino acid permease;pseudo=true;transl_table=11 NZ_CPUY01000038.1 RefSeq gene 9737 10591 . - . ID=gene-AD853_RS19615;Name=ampE;gbkey=Gene;gene=ampE;gene_biotype=protein_coding;locus_tag=AD853_RS19615;old_locus_tag=ERS008462_03954 NZ_CPUY01000038.1 Protein Homology CDS 9737 10591 . - 0 ID=cds-WP_002209326.1;Parent=gene-AD853_RS19615;Dbxref=GenBank:WP_002209326.1;Name=WP_002209326.1;gbkey=CDS;gene=ampE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209326.1;locus_tag=AD853_RS19615;product=beta-lactamase regulator AmpE;protein_id=WP_002209326.1;transl_table=11 NZ_CPUY01000038.1 RefSeq gene 10864 11415 . - . ID=gene-AD853_RS19620;Name=ampD;gbkey=Gene;gene=ampD;gene_biotype=protein_coding;locus_tag=AD853_RS19620;old_locus_tag=ERS008462_03955 NZ_CPUY01000038.1 Protein Homology CDS 10864 11415 . - 0 ID=cds-WP_002209325.1;Parent=gene-AD853_RS19620;Dbxref=GenBank:WP_002209325.1;Name=WP_002209325.1;Ontology_term=GO:0009253,GO:0008745;gbkey=CDS;gene=ampD;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209325.1;locus_tag=AD853_RS19620;product=1%2C6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD;protein_id=WP_002209325.1;transl_table=11 NZ_CPUY01000038.1 RefSeq gene 11528 12436 . + . ID=gene-AD853_RS19625;Name=nadC;gbkey=Gene;gene=nadC;gene_biotype=protein_coding;locus_tag=AD853_RS19625;old_locus_tag=ERS008462_03956 NZ_CPUY01000038.1 Protein Homology CDS 11528 12436 . + 0 ID=cds-WP_002209324.1;Parent=gene-AD853_RS19625;Dbxref=GenBank:WP_002209324.1;Name=WP_002209324.1;Ontology_term=GO:0009435,GO:0004514;gbkey=CDS;gene=nadC;go_function=nicotinate-nucleotide diphosphorylase (carboxylating) activity|0004514||IEA;go_process=NAD+ biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209324.1;locus_tag=AD853_RS19625;product=carboxylating nicotinate-nucleotide diphosphorylase;protein_id=WP_002209324.1;transl_table=11 NZ_CPUY01000038.1 RefSeq gene 12639 13103 . + . ID=gene-AD853_RS19630;Name=ppdD;gbkey=Gene;gene=ppdD;gene_biotype=protein_coding;locus_tag=AD853_RS19630;old_locus_tag=ERS008462_03957 NZ_CPUY01000038.1 Protein Homology CDS 12639 13103 . + 0 ID=cds-WP_002209323.1;Parent=gene-AD853_RS19630;Dbxref=GenBank:WP_002209323.1;Name=WP_002209323.1;gbkey=CDS;gene=ppdD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209323.1;locus_tag=AD853_RS19630;product=prepilin peptidase-dependent pilin;protein_id=WP_002209323.1;transl_table=11 NZ_CPUY01000038.1 RefSeq gene 13096 14634 . + . ID=gene-AD853_RS19635;Name=gspE;gbkey=Gene;gene=gspE;gene_biotype=protein_coding;locus_tag=AD853_RS19635;old_locus_tag=ERS008462_03958 NZ_CPUY01000038.1 Protein Homology CDS 13096 14634 . + 0 ID=cds-WP_002216083.1;Parent=gene-AD853_RS19635;Dbxref=GenBank:WP_002216083.1;Name=WP_002216083.1;gbkey=CDS;gene=gspE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011191740.1;locus_tag=AD853_RS19635;product=type II secretion system protein GspE;protein_id=WP_002216083.1;transl_table=11 NZ_CPUY01000038.1 RefSeq gene 14631 15830 . + . ID=gene-AD853_RS19640;Name=hofC;gbkey=Gene;gene=hofC;gene_biotype=protein_coding;locus_tag=AD853_RS19640;old_locus_tag=ERS008462_03959 NZ_CPUY01000038.1 Protein Homology CDS 14631 15830 . + 0 ID=cds-WP_011191739.1;Parent=gene-AD853_RS19640;Dbxref=GenBank:WP_011191739.1;Name=WP_011191739.1;Ontology_term=GO:0004827;gbkey=CDS;gene=hofC;go_function=proline-tRNA ligase activity|0004827||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011191739.1;locus_tag=AD853_RS19640;product=protein transport protein HofC;protein_id=WP_011191739.1;transl_table=11 NZ_CPUY01000038.1 RefSeq gene 16218 17261 . - . ID=gene-AD853_RS19645;Name=AD853_RS19645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS19645;old_locus_tag=ERS008462_03960 NZ_CPUY01000038.1 Protein Homology CDS 16218 17261 . - 0 ID=cds-WP_002209320.1;Parent=gene-AD853_RS19645;Dbxref=GenBank:WP_002209320.1;Name=WP_002209320.1;Ontology_term=GO:0009117,GO:0003920;gbkey=CDS;go_function=GMP reductase activity|0003920||IEA;go_process=nucleotide metabolic process|0009117||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209320.1;locus_tag=AD853_RS19645;product=GMP reductase;protein_id=WP_002209320.1;transl_table=11 NZ_CPUY01000038.1 RefSeq gene 17347 17547 . + . ID=gene-AD853_RS22360;Name=AD853_RS22360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS22360 NZ_CPUY01000038.1 Protein Homology CDS 17347 17547 . + 0 ID=cds-WP_012304581.1;Parent=gene-AD853_RS22360;Dbxref=GenBank:WP_012304581.1;Name=WP_012304581.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304581.1;locus_tag=AD853_RS22360;product=hypothetical protein;protein_id=WP_012304581.1;transl_table=11 NZ_CPUY01000038.1 RefSeq gene 17557 18177 . + . ID=gene-AD853_RS19655;Name=coaE;gbkey=Gene;gene=coaE;gene_biotype=protein_coding;locus_tag=AD853_RS19655;old_locus_tag=ERS008462_03961 NZ_CPUY01000038.1 Protein Homology CDS 17557 18177 . + 0 ID=cds-WP_038824517.1;Parent=gene-AD853_RS19655;Dbxref=GenBank:WP_038824517.1;Name=WP_038824517.1;Note=Dephospho-CoA kinase (CoaE) performs the final step in coenzyme A biosynthesis.;Ontology_term=GO:0015937,GO:0004140,GO:0005524,GO:0005737;gbkey=CDS;gene=coaE;go_component=cytoplasm|0005737||IEA;go_function=dephospho-CoA kinase activity|0004140||IEA,ATP binding|0005524||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209319.1;locus_tag=AD853_RS19655;product=dephospho-CoA kinase;protein_id=WP_038824517.1;transl_table=11 NZ_CPUY01000038.1 RefSeq gene 18174 18926 . + . ID=gene-AD853_RS19660;Name=zapD;gbkey=Gene;gene=zapD;gene_biotype=protein_coding;locus_tag=AD853_RS19660;old_locus_tag=ERS008462_03962 NZ_CPUY01000038.1 Protein Homology CDS 18174 18926 . + 0 ID=cds-WP_002209318.1;Parent=gene-AD853_RS19660;Dbxref=GenBank:WP_002209318.1;Name=WP_002209318.1;gbkey=CDS;gene=zapD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019080502.1;locus_tag=AD853_RS19660;product=cell division protein ZapD;protein_id=WP_002209318.1;transl_table=11 NZ_CPUY01000038.1 RefSeq gene 19134 19340 . + . ID=gene-AD853_RS19665;Name=yacG;gbkey=Gene;gene=yacG;gene_biotype=protein_coding;locus_tag=AD853_RS19665;old_locus_tag=ERS008462_03963 NZ_CPUY01000038.1 Protein Homology CDS 19134 19340 . + 0 ID=cds-WP_002209317.1;Parent=gene-AD853_RS19665;Dbxref=GenBank:WP_002209317.1;Name=WP_002209317.1;Ontology_term=GO:0006355,GO:0008270;gbkey=CDS;gene=yacG;go_function=zinc ion binding|0008270||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209317.1;locus_tag=AD853_RS19665;product=DNA gyrase inhibitor YacG;protein_id=WP_002209317.1;transl_table=11 ##sequence-region NZ_CPUY01000039.1 1 13127 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=633 NZ_CPUY01000039.1 RefSeq region 1 13127 . + . ID=NZ_CPUY01000039.1:1..13127;Dbxref=taxon:633;collection-date=1900/2008;country=South Africa;gbkey=Src;genome=genomic;isolation-source=not known;mol_type=genomic DNA;nat-host=pig;serovar=O:3;strain=IP32544 NZ_CPUY01000039.1 RefSeq gene 185 610 . - . ID=gene-AD853_RS19670;Name=sycH;gbkey=Gene;gene=sycH;gene_biotype=protein_coding;locus_tag=AD853_RS19670;old_locus_tag=ERS008462_03964 NZ_CPUY01000039.1 Protein Homology CDS 185 610 . - 0 ID=cds-WP_002213267.1;Parent=gene-AD853_RS19670;Dbxref=GenBank:WP_002213267.1;Name=WP_002213267.1;gbkey=CDS;gene=sycH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002213267.1;locus_tag=AD853_RS19670;product=type III secretion system chaperone SycH;protein_id=WP_002213267.1;transl_table=11 NZ_CPUY01000039.1 RefSeq pseudogene 988 1386 . - . ID=gene-AD853_RS19675;Name=AD853_RS19675;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD853_RS19675;old_locus_tag=ERS008462_03965;partial=true;pseudo=true;start_range=.,988 NZ_CPUY01000039.1 Protein Homology CDS 988 1386 . - 0 ID=cds-AD853_RS19675;Parent=gene-AD853_RS19675;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000544830.1;locus_tag=AD853_RS19675;partial=true;product=ATP-binding protein;pseudo=true;start_range=.,988;transl_table=11 NZ_CPUY01000039.1 RefSeq gene 1386 2558 . - . ID=gene-AD853_RS19680;Name=istA;gbkey=Gene;gene=istA;gene_biotype=protein_coding;locus_tag=AD853_RS19680;old_locus_tag=ERS008462_03966 NZ_CPUY01000039.1 Protein Homology CDS 1386 2558 . - 0 ID=cds-WP_042592527.1;Parent=gene-AD853_RS19680;Dbxref=GenBank:WP_042592527.1;Name=WP_042592527.1;Ontology_term=GO:0004803;gbkey=CDS;gene=istA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000952428.1;locus_tag=AD853_RS19680;product=IS21 family transposase;protein_id=WP_042592527.1;transl_table=11 NZ_CPUY01000039.1 RefSeq pseudogene 2661 3305 . + . ID=gene-AD853_RS19685;Name=AD853_RS19685;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD853_RS19685;old_locus_tag=ERS008462_03968;partial=true;pseudo=true;start_range=.,2661 NZ_CPUY01000039.1 Protein Homology CDS 2661 3305 . + 0 ID=cds-AD853_RS19685;Parent=gene-AD853_RS19685;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611475.1;locus_tag=AD853_RS19685;partial=true;product=IS3 family transposase;pseudo=true;start_range=.,2661;transl_table=11 NZ_CPUY01000039.1 RefSeq gene 3368 3760 . - . ID=gene-AD853_RS19690;Name=sycE;gbkey=Gene;gene=sycE;gene_biotype=protein_coding;gene_synonym=yerA;locus_tag=AD853_RS19690;old_locus_tag=ERS008462_03969 NZ_CPUY01000039.1 Protein Homology CDS 3368 3760 . - 0 ID=cds-WP_002213403.1;Parent=gene-AD853_RS19690;Dbxref=GenBank:WP_002213403.1;Name=WP_002213403.1;gbkey=CDS;gene=sycE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002213403.1;locus_tag=AD853_RS19690;product=type III secretion system chaperone SycE/YerA;protein_id=WP_002213403.1;transl_table=11 NZ_CPUY01000039.1 RefSeq gene 3954 4613 . + . ID=gene-AD853_RS19695;Name=yopE;gbkey=Gene;gene=yopE;gene_biotype=protein_coding;locus_tag=AD853_RS19695;old_locus_tag=ERS008462_03970 NZ_CPUY01000039.1 Protein Homology CDS 3954 4613 . + 0 ID=cds-WP_072080871.1;Parent=gene-AD853_RS19695;Dbxref=GenBank:WP_072080871.1;Name=WP_072080871.1;gbkey=CDS;gene=yopE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002229754.1;locus_tag=AD853_RS19695;product=type III secretion system effector GTPase activator YopE;protein_id=WP_072080871.1;transl_table=11 NZ_CPUY01000039.1 RefSeq gene 4753 5052 . - . ID=gene-AD853_RS19700;Name=AD853_RS19700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS19700;old_locus_tag=ERS008462_03971 NZ_CPUY01000039.1 Protein Homology CDS 4753 5052 . - 0 ID=cds-WP_002213360.1;Parent=gene-AD853_RS19700;Dbxref=GenBank:WP_002213360.1;Name=WP_002213360.1;Ontology_term=GO:0090729,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=toxin activity|0090729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002213360.1;locus_tag=AD853_RS19700;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_002213360.1;transl_table=11 NZ_CPUY01000039.1 RefSeq gene 5045 5287 . - . ID=gene-AD853_RS19705;Name=AD853_RS19705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS19705;old_locus_tag=ERS008462_03972 NZ_CPUY01000039.1 Protein Homology CDS 5045 5287 . - 0 ID=cds-WP_012414146.1;Parent=gene-AD853_RS19705;Dbxref=GenBank:WP_012414146.1;Name=WP_012414146.1;Ontology_term=GO:0051983;gbkey=CDS;go_process=regulation of chromosome segregation|0051983||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002224342.1;locus_tag=AD853_RS19705;product=type II toxin-antitoxin system ParD family antitoxin;protein_id=WP_012414146.1;transl_table=11 NZ_CPUY01000039.1 RefSeq pseudogene 5453 5745 . - . ID=gene-AD853_RS21380;Name=AD853_RS21380;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD853_RS21380;partial=true;pseudo=true;start_range=.,5453 NZ_CPUY01000039.1 Protein Homology CDS 5453 5745 . - 0 ID=cds-AD853_RS21380;Parent=gene-AD853_RS21380;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012606398.1;locus_tag=AD853_RS21380;partial=true;product=IS6 family transposase;pseudo=true;start_range=.,5453;transl_table=11 NZ_CPUY01000039.1 RefSeq gene 5830 6003 . + . ID=gene-AD853_RS21925;Name=AD853_RS21925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS21925 NZ_CPUY01000039.1 GeneMarkS-2+ CDS 5830 6003 . + 0 ID=cds-WP_165285961.1;Parent=gene-AD853_RS21925;Dbxref=GenBank:WP_165285961.1;Name=WP_165285961.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AD853_RS21925;product=hypothetical protein;protein_id=WP_165285961.1;transl_table=11 NZ_CPUY01000039.1 RefSeq gene 6414 7379 . - . ID=gene-AD853_RS19710;Name=AD853_RS19710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS19710;old_locus_tag=ERS008462_03974 NZ_CPUY01000039.1 Protein Homology CDS 6414 7379 . - 0 ID=cds-WP_050124671.1;Parent=gene-AD853_RS19710;Dbxref=GenBank:WP_050124671.1;Name=WP_050124671.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002213354.1;locus_tag=AD853_RS19710;product=ParB/RepB/Spo0J family plasmid partition protein;protein_id=WP_050124671.1;transl_table=11 NZ_CPUY01000039.1 RefSeq gene 7376 8542 . - . ID=gene-AD853_RS19715;Name=sopA;gbkey=Gene;gene=sopA;gene_biotype=protein_coding;locus_tag=AD853_RS19715;old_locus_tag=ERS008462_03975 NZ_CPUY01000039.1 Protein Homology CDS 7376 8542 . - 0 ID=cds-WP_002220902.1;Parent=gene-AD853_RS19715;Dbxref=GenBank:WP_002220902.1;Name=WP_002220902.1;gbkey=CDS;gene=sopA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010891239.1;locus_tag=AD853_RS19715;product=plasmid-partitioning protein SopA;protein_id=WP_002220902.1;transl_table=11 NZ_CPUY01000039.1 RefSeq pseudogene 9302 9611 . - . ID=gene-AD853_RS21385;Name=AD853_RS21385;end_range=9611,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD853_RS21385;partial=true;pseudo=true NZ_CPUY01000039.1 Protein Homology CDS 9302 9611 . - 0 ID=cds-AD853_RS21385;Parent=gene-AD853_RS21385;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006310,GO:0015074,GO:0032196,GO:0003677;end_range=9611,.;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA,transposition|0032196||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611482.1;locus_tag=AD853_RS21385;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_CPUY01000039.1 RefSeq pseudogene 9620 9798 . - . ID=gene-AD853_RS22370;Name=tnpB;gbkey=Gene;gene=tnpB;gene_biotype=pseudogene;locus_tag=AD853_RS22370;partial=true;pseudo=true;start_range=.,9620 NZ_CPUY01000039.1 Protein Homology CDS 9620 9798 . - 0 ID=cds-AD853_RS22370;Parent=gene-AD853_RS22370;Note=TnpB%2C as the term is used for proteins encoded by IS66 family insertion elements%2C is considered an accessory protein%2C since TnpC%2C encoded by a neighboring gene%2C is a DDE family transposase.%3B frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;gene=tnpB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000957248.1;locus_tag=AD853_RS22370;partial=true;product=IS66 family insertion sequence element accessory protein TnpB;pseudo=true;start_range=.,9620;transl_table=11 NZ_CPUY01000039.1 RefSeq gene 9792 10031 . - . ID=gene-AD853_RS21215;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=AD853_RS21215 NZ_CPUY01000039.1 Protein Homology CDS 9792 10031 . - 0 ID=cds-WP_002213291.1;Parent=gene-AD853_RS21215;Dbxref=GenBank:WP_002213291.1;Name=WP_002213291.1;gbkey=CDS;gene=tnpA;inference=COORDINATES: protein motif:HMM:NF047593.1;locus_tag=AD853_RS21215;product=IS66 family insertion sequence element accessory protein TnpA;protein_id=WP_002213291.1;transl_table=11 NZ_CPUY01000039.1 RefSeq gene 11205 12071 . - . ID=gene-AD853_RS19725;Name=repA;gbkey=Gene;gene=repA;gene_biotype=protein_coding;locus_tag=AD853_RS19725;old_locus_tag=ERS008462_03979 NZ_CPUY01000039.1 Protein Homology CDS 11205 12071 . - 0 ID=cds-WP_050124672.1;Parent=gene-AD853_RS19725;Dbxref=GenBank:WP_050124672.1;Name=WP_050124672.1;Ontology_term=GO:0006276;gbkey=CDS;gene=repA;go_process=plasmid maintenance|0006276||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002225475.1;locus_tag=AD853_RS19725;product=incFII family plasmid replication initiator RepA;protein_id=WP_050124672.1;transl_table=11 NZ_CPUY01000039.1 RefSeq gene 12064 12144 . - . ID=gene-AD853_RS19730;Name=tap;gbkey=Gene;gene=tap;gene_biotype=protein_coding;locus_tag=AD853_RS19730 NZ_CPUY01000039.1 Protein Homology CDS 12064 12144 . - 0 ID=cds-WP_202914085.1;Parent=gene-AD853_RS19730;Dbxref=GenBank:WP_202914085.1;Name=WP_202914085.1;Ontology_term=GO:0006276,GO:0031556;gbkey=CDS;gene=tap;go_process=plasmid maintenance|0006276||IEA,transcriptional attenuation by ribosome|0031556||IEA;inference=COORDINATES: protein motif:HMM:TIGR03475.1;locus_tag=AD853_RS19730;product=RepA leader peptide Tap;protein_id=WP_202914085.1;transl_table=11 NZ_CPUY01000039.1 RefSeq gene 12380 12634 . - . ID=gene-AD853_RS19735;Name=AD853_RS19735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS19735;old_locus_tag=ERS008462_03981 NZ_CPUY01000039.1 Protein Homology CDS 12380 12634 . - 0 ID=cds-WP_002229817.1;Parent=gene-AD853_RS19735;Dbxref=GenBank:WP_002229817.1;Name=WP_002229817.1;Ontology_term=GO:0006276;gbkey=CDS;go_process=plasmid maintenance|0006276||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002229817.1;locus_tag=AD853_RS19735;product=replication regulatory protein RepA;protein_id=WP_002229817.1;transl_table=11 NZ_CPUY01000039.1 RefSeq gene 12772 13127 . - . ID=gene-AD853_RS19740;Name=AD853_RS19740;end_range=13127,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS19740;old_locus_tag=ERS008462_03982;partial=true NZ_CPUY01000039.1 Protein Homology CDS 12772 13127 . - 2 ID=cds-WP_230674889.1;Parent=gene-AD853_RS19740;Dbxref=GenBank:WP_230674889.1;Name=WP_230674889.1;end_range=13127,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001194258.1;locus_tag=AD853_RS19740;partial=true;product=phospholipase D-like domain-containing protein;protein_id=WP_230674889.1;transl_table=11 ##sequence-region NZ_CPUY01000040.1 1 11277 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=633 NZ_CPUY01000040.1 RefSeq region 1 11277 . + . ID=NZ_CPUY01000040.1:1..11277;Dbxref=taxon:633;collection-date=1900/2008;country=South Africa;gbkey=Src;genome=genomic;isolation-source=not known;mol_type=genomic DNA;nat-host=pig;serovar=O:3;strain=IP32544 NZ_CPUY01000040.1 RefSeq pseudogene 66 2429 . + . ID=gene-AD853_RS19745;Name=AD853_RS19745;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD853_RS19745;old_locus_tag=ERS008462_03983;partial=true;pseudo=true;start_range=.,66 NZ_CPUY01000040.1 Protein Homology CDS 66 2429 . + 0 ID=cds-AD853_RS19745;Parent=gene-AD853_RS19745;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_032495017.1;locus_tag=AD853_RS19745;partial=true;product=Tn3-like element Tn3 family transposase;pseudo=true;start_range=.,66;transl_table=11 NZ_CPUY01000040.1 RefSeq gene 2462 2686 . - . ID=gene-AD853_RS19750;Name=AD853_RS19750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS19750;old_locus_tag=ERS008462_03984 NZ_CPUY01000040.1 GeneMarkS-2+ CDS 2462 2686 . - 0 ID=cds-WP_230674891.1;Parent=gene-AD853_RS19750;Dbxref=GenBank:WP_230674891.1;Name=WP_230674891.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AD853_RS19750;product=hypothetical protein;protein_id=WP_230674891.1;transl_table=11 NZ_CPUY01000040.1 RefSeq gene 2686 5922 . - . ID=gene-AD853_RS19755;Name=mobF;gbkey=Gene;gene=mobF;gene_biotype=protein_coding;locus_tag=AD853_RS19755;old_locus_tag=ERS008462_03985 NZ_CPUY01000040.1 Protein Homology CDS 2686 5922 . - 0 ID=cds-WP_000884352.1;Parent=gene-AD853_RS19755;Dbxref=GenBank:WP_000884352.1;Name=WP_000884352.1;Ontology_term=GO:0003677;gbkey=CDS;gene=mobF;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000884352.1;locus_tag=AD853_RS19755;product=MobF family relaxase;protein_id=WP_000884352.1;transl_table=11 NZ_CPUY01000040.1 RefSeq gene 5922 7451 . - . ID=gene-AD853_RS19760;Name=AD853_RS19760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS19760;old_locus_tag=ERS008462_03986 NZ_CPUY01000040.1 Protein Homology CDS 5922 7451 . - 0 ID=cds-WP_000342688.1;Parent=gene-AD853_RS19760;Dbxref=GenBank:WP_000342688.1;Name=WP_000342688.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000342687.1;locus_tag=AD853_RS19760;product=type IV secretion system DNA-binding domain-containing protein;protein_id=WP_000342688.1;transl_table=11 NZ_CPUY01000040.1 RefSeq gene 7453 7869 . - . ID=gene-AD853_RS19765;Name=AD853_RS19765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS19765;old_locus_tag=ERS008462_03987 NZ_CPUY01000040.1 Protein Homology CDS 7453 7869 . - 0 ID=cds-WP_001532083.1;Parent=gene-AD853_RS19765;Dbxref=GenBank:WP_001532083.1;Name=WP_001532083.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001749975.1;locus_tag=AD853_RS19765;product=hypothetical protein;protein_id=WP_001532083.1;transl_table=11 NZ_CPUY01000040.1 RefSeq gene 8382 8801 . + . ID=gene-AD853_RS22375;Name=stbA;gbkey=Gene;gene=stbA;gene_biotype=protein_coding;locus_tag=AD853_RS22375;old_locus_tag=ERS008462_03988 NZ_CPUY01000040.1 Protein Homology CDS 8382 8801 . + 0 ID=cds-WP_000802909.1;Parent=gene-AD853_RS22375;Dbxref=GenBank:WP_000802909.1;Name=WP_000802909.1;gbkey=CDS;gene=stbA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001749974.1;locus_tag=AD853_RS22375;product=plasmid stabilization protein StbA;protein_id=WP_000802909.1;transl_table=11 NZ_CPUY01000040.1 RefSeq gene 8810 9526 . + . ID=gene-AD853_RS19775;Name=stbB;gbkey=Gene;gene=stbB;gene_biotype=protein_coding;locus_tag=AD853_RS19775;old_locus_tag=ERS008462_03989 NZ_CPUY01000040.1 Protein Homology CDS 8810 9526 . + 0 ID=cds-WP_000861577.1;Parent=gene-AD853_RS19775;Dbxref=GenBank:WP_000861577.1;Name=WP_000861577.1;gbkey=CDS;gene=stbB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000861577.1;locus_tag=AD853_RS19775;product=StbB family protein;protein_id=WP_000861577.1;transl_table=11 NZ_CPUY01000040.1 RefSeq gene 9528 9896 . + . ID=gene-AD853_RS19780;Name=stbC;gbkey=Gene;gene=stbC;gene_biotype=protein_coding;locus_tag=AD853_RS19780;old_locus_tag=ERS008462_03990 NZ_CPUY01000040.1 Protein Homology CDS 9528 9896 . + 0 ID=cds-WP_000414913.1;Parent=gene-AD853_RS19780;Dbxref=GenBank:WP_000414913.1;Name=WP_000414913.1;gbkey=CDS;gene=stbC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001749972.1;locus_tag=AD853_RS19780;product=plasmid stabilization protein StbC;protein_id=WP_000414913.1;transl_table=11 NZ_CPUY01000040.1 RefSeq gene 10078 10422 . + . ID=gene-AD853_RS19785;Name=AD853_RS19785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS19785;old_locus_tag=ERS008462_03991 NZ_CPUY01000040.1 GeneMarkS-2+ CDS 10078 10422 . + 0 ID=cds-WP_000999874.1;Parent=gene-AD853_RS19785;Dbxref=GenBank:WP_000999874.1;Name=WP_000999874.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AD853_RS19785;product=hypothetical protein;protein_id=WP_000999874.1;transl_table=11 NZ_CPUY01000040.1 RefSeq gene 10533 10853 . - . ID=gene-AD853_RS19790;Name=ccgAII;gbkey=Gene;gene=ccgAII;gene_biotype=protein_coding;locus_tag=AD853_RS19790;old_locus_tag=ERS008462_03992 NZ_CPUY01000040.1 Protein Homology CDS 10533 10853 . - 0 ID=cds-WP_000211833.1;Parent=gene-AD853_RS19790;Dbxref=GenBank:WP_000211833.1;Name=WP_000211833.1;gbkey=CDS;gene=ccgAII;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000211833.1;locus_tag=AD853_RS19790;product=protein CcgAII;protein_id=WP_000211833.1;transl_table=11 NZ_CPUY01000040.1 RefSeq gene 10908 11087 . - . ID=gene-AD853_RS19795;Name=ccgAI;gbkey=Gene;gene=ccgAI;gene_biotype=protein_coding;locus_tag=AD853_RS19795;old_locus_tag=ERS008462_03993 NZ_CPUY01000040.1 Protein Homology CDS 10908 11087 . - 0 ID=cds-WP_000214483.1;Parent=gene-AD853_RS19795;Dbxref=GenBank:WP_000214483.1;Name=WP_000214483.1;gbkey=CDS;gene=ccgAI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000214483.1;locus_tag=AD853_RS19795;product=protein CcgAI;protein_id=WP_000214483.1;transl_table=11 ##sequence-region NZ_CPUY01000041.1 1 8906 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=633 NZ_CPUY01000041.1 RefSeq region 1 8906 . + . ID=NZ_CPUY01000041.1:1..8906;Dbxref=taxon:633;collection-date=1900/2008;country=South Africa;gbkey=Src;genome=genomic;isolation-source=not known;mol_type=genomic DNA;nat-host=pig;serovar=O:3;strain=IP32544 NZ_CPUY01000041.1 RefSeq gene 1 196 . + . ID=gene-AD853_RS22380;Name=AD853_RS22380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS22380;partial=true;start_range=.,1 NZ_CPUY01000041.1 GeneMarkS-2+ CDS 1 196 . + 1 ID=cds-WP_230674893.1;Parent=gene-AD853_RS22380;Dbxref=GenBank:WP_230674893.1;Name=WP_230674893.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AD853_RS22380;partial=true;product=hypothetical protein;protein_id=WP_230674893.1;start_range=.,1;transl_table=11 NZ_CPUY01000041.1 RefSeq gene 245 1909 . - . ID=gene-AD853_RS19805;Name=asnB;gbkey=Gene;gene=asnB;gene_biotype=protein_coding;locus_tag=AD853_RS19805;old_locus_tag=ERS008462_03994 NZ_CPUY01000041.1 Protein Homology CDS 245 1909 . - 0 ID=cds-WP_038825353.1;Parent=gene-AD853_RS19805;Dbxref=GenBank:WP_038825353.1;Name=WP_038825353.1;Ontology_term=GO:0070981,GO:0004066;gbkey=CDS;gene=asnB;go_function=asparagine synthase (glutamine-hydrolyzing) activity|0004066||IEA;go_process=L-asparagine biosynthetic process|0070981||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001724523.1;locus_tag=AD853_RS19805;product=asparagine synthase B;protein_id=WP_038825353.1;transl_table=11 NZ_CPUY01000041.1 RefSeq gene 2264 3016 . - . ID=gene-AD853_RS19810;Name=AD853_RS19810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS19810;old_locus_tag=ERS008462_03995 NZ_CPUY01000041.1 Protein Homology CDS 2264 3016 . - 0 ID=cds-WP_002210349.1;Parent=gene-AD853_RS19810;Dbxref=GenBank:WP_002210349.1;Name=WP_002210349.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005163352.1;locus_tag=AD853_RS19810;product=HAD-IIA family hydrolase;protein_id=WP_002210349.1;transl_table=11 NZ_CPUY01000041.1 RefSeq gene 3089 4315 . - . ID=gene-AD853_RS19815;Name=nagC;gbkey=Gene;gene=nagC;gene_biotype=protein_coding;gene_synonym=nagR;locus_tag=AD853_RS19815;old_locus_tag=ERS008462_03996 NZ_CPUY01000041.1 Protein Homology CDS 3089 4315 . - 0 ID=cds-WP_002224863.1;Parent=gene-AD853_RS19815;Dbxref=GenBank:WP_002224863.1;Name=WP_002224863.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;gene=nagC;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002224863.1;locus_tag=AD853_RS19815;product=DNA-binding transcriptional regulator NagC;protein_id=WP_002224863.1;transl_table=11 NZ_CPUY01000041.1 RefSeq gene 4332 5477 . - . ID=gene-AD853_RS19820;Name=nagA;gbkey=Gene;gene=nagA;gene_biotype=protein_coding;locus_tag=AD853_RS19820;old_locus_tag=ERS008462_03997 NZ_CPUY01000041.1 Protein Homology CDS 4332 5477 . - 0 ID=cds-WP_002210351.1;Parent=gene-AD853_RS19820;Dbxref=GenBank:WP_002210351.1;Name=WP_002210351.1;Ontology_term=GO:0006044,GO:0008448;gbkey=CDS;gene=nagA;go_function=N-acetylglucosamine-6-phosphate deacetylase activity|0008448||IEA;go_process=N-acetylglucosamine metabolic process|0006044||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105503.1;locus_tag=AD853_RS19820;product=N-acetylglucosamine-6-phosphate deacetylase;protein_id=WP_002210351.1;transl_table=11 NZ_CPUY01000041.1 RefSeq gene 5497 6297 . - . ID=gene-AD853_RS19825;Name=nagB;gbkey=Gene;gene=nagB;gene_biotype=protein_coding;locus_tag=AD853_RS19825;old_locus_tag=ERS008462_03998 NZ_CPUY01000041.1 Protein Homology CDS 5497 6297 . - 0 ID=cds-WP_038400103.1;Parent=gene-AD853_RS19825;Dbxref=GenBank:WP_038400103.1;Name=WP_038400103.1;Ontology_term=GO:0006044,GO:0004342;gbkey=CDS;gene=nagB;go_function=glucosamine-6-phosphate deaminase activity|0004342||IEA;go_process=N-acetylglucosamine metabolic process|0006044||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459669.1;locus_tag=AD853_RS19825;product=glucosamine-6-phosphate deaminase;protein_id=WP_038400103.1;transl_table=11 NZ_CPUY01000041.1 RefSeq gene 6695 8728 . + . ID=gene-AD853_RS19830;Name=nagE;gbkey=Gene;gene=nagE;gene_biotype=protein_coding;locus_tag=AD853_RS19830;old_locus_tag=ERS008462_03999 NZ_CPUY01000041.1 Protein Homology CDS 6695 8728 . + 0 ID=cds-WP_012105501.1;Parent=gene-AD853_RS19830;Dbxref=GenBank:WP_012105501.1;Name=WP_012105501.1;Ontology_term=GO:0009401,GO:0008982,GO:0015572,GO:0016020;gbkey=CDS;gene=nagE;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA,N-acetylglucosamine transmembrane transporter activity|0015572||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210353.1;locus_tag=AD853_RS19830;product=N-acetylglucosamine-specific PTS transporter subunit IIBC;protein_id=WP_012105501.1;transl_table=11 ##sequence-region NZ_CPUY01000042.1 1 6254 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=633 NZ_CPUY01000042.1 RefSeq region 1 6254 . + . ID=NZ_CPUY01000042.1:1..6254;Dbxref=taxon:633;collection-date=1900/2008;country=South Africa;gbkey=Src;genome=genomic;isolation-source=not known;mol_type=genomic DNA;nat-host=pig;serovar=O:3;strain=IP32544 NZ_CPUY01000042.1 RefSeq gene 106 825 . - . ID=gene-AD853_RS19835;Name=AD853_RS19835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS19835;old_locus_tag=ERS008462_04001 NZ_CPUY01000042.1 Protein Homology CDS 106 825 . - 0 ID=cds-WP_000359513.1;Parent=gene-AD853_RS19835;Dbxref=GenBank:WP_000359513.1;Name=WP_000359513.1;Ontology_term=GO:0006270,GO:0003677,GO:0003887;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication initiation|0006270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012561120.1;locus_tag=AD853_RS19835;product=replication initiation protein;protein_id=WP_000359513.1;transl_table=11 NZ_CPUY01000042.1 RefSeq gene 1385 1726 . + . ID=gene-AD853_RS19840;Name=ardK;gbkey=Gene;gene=ardK;gene_biotype=protein_coding;locus_tag=AD853_RS19840;old_locus_tag=ERS008462_04002 NZ_CPUY01000042.1 Protein Homology CDS 1385 1726 . + 0 ID=cds-WP_000057569.1;Parent=gene-AD853_RS19840;Dbxref=GenBank:WP_000057569.1;Name=WP_000057569.1;gbkey=CDS;gene=ardK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000057569.1;locus_tag=AD853_RS19840;product=antirestriction protein ArdAB regulator ArdK;protein_id=WP_000057569.1;transl_table=11 NZ_CPUY01000042.1 RefSeq gene 1741 2532 . - . ID=gene-AD853_RS19845;Name=AD853_RS19845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS19845;old_locus_tag=ERS008462_04003 NZ_CPUY01000042.1 Protein Homology CDS 1741 2532 . - 0 ID=cds-WP_001452808.1;Parent=gene-AD853_RS19845;Dbxref=GenBank:WP_001452808.1;Name=WP_001452808.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012561121.1;locus_tag=AD853_RS19845;product=SprT-like domain-containing protein;protein_id=WP_001452808.1;transl_table=11 NZ_CPUY01000042.1 RefSeq gene 2683 3948 . - . ID=gene-AD853_RS19850;Name=mucB;gbkey=Gene;gene=mucB;gene_biotype=protein_coding;locus_tag=AD853_RS19850;old_locus_tag=ERS008462_04004 NZ_CPUY01000042.1 Protein Homology CDS 2683 3948 . - 0 ID=cds-WP_000457702.1;Parent=gene-AD853_RS19850;Dbxref=GenBank:WP_000457702.1;Name=WP_000457702.1;gbkey=CDS;gene=mucB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_032488541.1;locus_tag=AD853_RS19850;product=translesion error-prone DNA polymerase V subunit MucB;protein_id=WP_000457702.1;transl_table=11 NZ_CPUY01000042.1 RefSeq gene 3936 4376 . - . ID=gene-AD853_RS19855;Name=mucA;gbkey=Gene;gene=mucA;gene_biotype=protein_coding;locus_tag=AD853_RS19855;old_locus_tag=ERS008462_04005 NZ_CPUY01000042.1 Protein Homology CDS 3936 4376 . - 0 ID=cds-WP_000861760.1;Parent=gene-AD853_RS19855;Dbxref=GenBank:WP_000861760.1;Name=WP_000861760.1;gbkey=CDS;gene=mucA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_107685442.1;locus_tag=AD853_RS19855;product=translesion error-prone DNA polymerase V autoproteolytic subunit MucA;protein_id=WP_000861760.1;transl_table=11 NZ_CPUY01000042.1 RefSeq gene 4789 5214 . + . ID=gene-AD853_RS19860;Name=ardB;gbkey=Gene;gene=ardB;gene_biotype=protein_coding;locus_tag=AD853_RS19860;old_locus_tag=ERS008462_04006 NZ_CPUY01000042.1 Protein Homology CDS 4789 5214 . + 0 ID=cds-WP_000447669.1;Parent=gene-AD853_RS19860;Dbxref=GenBank:WP_000447669.1;Name=WP_000447669.1;gbkey=CDS;gene=ardB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000447669.1;locus_tag=AD853_RS19860;product=antirestriction protein ArdB;protein_id=WP_000447669.1;transl_table=11 NZ_CPUY01000042.1 RefSeq gene 5272 5676 . + . ID=gene-AD853_RS19865;Name=ardR;gbkey=Gene;gene=ardR;gene_biotype=protein_coding;locus_tag=AD853_RS19865;old_locus_tag=ERS008462_04007 NZ_CPUY01000042.1 Protein Homology CDS 5272 5676 . + 0 ID=cds-WP_000881514.1;Parent=gene-AD853_RS19865;Dbxref=GenBank:WP_000881514.1;Name=WP_000881514.1;gbkey=CDS;gene=ardR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000881514.1;locus_tag=AD853_RS19865;product=antirestriction protein ArdAB regulator ArdR;protein_id=WP_000881514.1;transl_table=11 NZ_CPUY01000042.1 RefSeq gene 5686 5925 . + . ID=gene-AD853_RS19870;Name=AD853_RS19870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS19870;old_locus_tag=ERS008462_04008 NZ_CPUY01000042.1 GeneMarkS-2+ CDS 5686 5925 . + 0 ID=cds-WP_000932975.1;Parent=gene-AD853_RS19870;Dbxref=GenBank:WP_000932975.1;Name=WP_000932975.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AD853_RS19870;product=hypothetical protein;protein_id=WP_000932975.1;transl_table=11 ##sequence-region NZ_CPUY01000043.1 1 4959 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=633 NZ_CPUY01000043.1 RefSeq region 1 4959 . + . ID=NZ_CPUY01000043.1:1..4959;Dbxref=taxon:633;collection-date=1900/2008;country=South Africa;gbkey=Src;genome=genomic;isolation-source=not known;mol_type=genomic DNA;nat-host=pig;serovar=O:3;strain=IP32544 NZ_CPUY01000043.1 RefSeq gene 417 866 . + . ID=gene-AD853_RS19875;Name=AD853_RS19875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS19875;old_locus_tag=ERS008462_04010 NZ_CPUY01000043.1 Protein Homology CDS 417 866 . + 0 ID=cds-WP_002229809.1;Parent=gene-AD853_RS19875;Dbxref=GenBank:WP_002229809.1;Name=WP_002229809.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002229809.1;locus_tag=AD853_RS19875;product=type III secretion system chaperone;protein_id=WP_002229809.1;transl_table=11 NZ_CPUY01000043.1 RefSeq gene 874 3072 . + . ID=gene-AD853_RS19880;Name=yopO;gbkey=Gene;gene=yopO;gene_biotype=protein_coding;gene_synonym=ypkA;locus_tag=AD853_RS19880;old_locus_tag=ERS008462_04011 NZ_CPUY01000043.1 Protein Homology CDS 874 3072 . + 0 ID=cds-WP_011191359.1;Parent=gene-AD853_RS19880;Dbxref=GenBank:WP_011191359.1;Name=WP_011191359.1;gbkey=CDS;gene=yopO;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011191359.1;locus_tag=AD853_RS19880;product=type III secretion system effector protein kinase YopO/YpkA;protein_id=WP_011191359.1;transl_table=11 NZ_CPUY01000043.1 RefSeq gene 3468 4334 . + . ID=gene-AD853_RS19885;Name=yopJ;gbkey=Gene;gene=yopJ;gene_biotype=protein_coding;locus_tag=AD853_RS19885;old_locus_tag=ERS008462_04012 NZ_CPUY01000043.1 Protein Homology CDS 3468 4334 . + 0 ID=cds-WP_002225474.1;Parent=gene-AD853_RS19885;Dbxref=GenBank:WP_002225474.1;Name=WP_002225474.1;gbkey=CDS;gene=yopJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002225474.1;locus_tag=AD853_RS19885;product=type III secretion system effector acetyltransferase YopJ;protein_id=WP_002225474.1;transl_table=11 NZ_CPUY01000043.1 RefSeq pseudogene 4551 4655 . + . ID=gene-AD853_RS22385;Name=AD853_RS22385;end_range=4655,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD853_RS22385;partial=true;pseudo=true;start_range=.,4551 NZ_CPUY01000043.1 Protein Homology CDS 4551 4655 . + 0 ID=cds-AD853_RS22385;Parent=gene-AD853_RS22385;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=4655,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000513068.1;locus_tag=AD853_RS22385;partial=true;product=GNAT family N-acetyltransferase;pseudo=true;start_range=.,4551;transl_table=11 NZ_CPUY01000043.1 RefSeq gene 4769 4959 . - . ID=gene-AD853_RS22390;Name=AD853_RS22390;end_range=4959,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS22390;partial=true NZ_CPUY01000043.1 GeneMarkS-2+ CDS 4769 4959 . - 2 ID=cds-WP_002424172.1;Parent=gene-AD853_RS22390;Dbxref=GenBank:WP_002424172.1;Name=WP_002424172.1;end_range=4959,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AD853_RS22390;partial=true;product=hypothetical protein;protein_id=WP_002424172.1;transl_table=11 ##sequence-region NZ_CPUY01000044.1 1 4169 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=633 NZ_CPUY01000044.1 RefSeq region 1 4169 . + . ID=NZ_CPUY01000044.1:1..4169;Dbxref=taxon:633;collection-date=1900/2008;country=South Africa;gbkey=Src;genome=genomic;isolation-source=not known;mol_type=genomic DNA;nat-host=pig;serovar=O:3;strain=IP32544 NZ_CPUY01000044.1 RefSeq pseudogene 63 1064 . - . ID=gene-AD853_RS19890;Name=AD853_RS19890;end_range=1064,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD853_RS19890;old_locus_tag=ERS008462_04013;partial=true;pseudo=true NZ_CPUY01000044.1 Protein Homology CDS 63 1064 . - 0 ID=cds-AD853_RS19890;Parent=gene-AD853_RS19890;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=1064,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015683569.1;locus_tag=AD853_RS19890;partial=true;product=helicase-related protein;pseudo=true;transl_table=11 NZ_CPUY01000044.1 RefSeq pseudogene 1066 1621 . - . ID=gene-AD853_RS19895;Name=AD853_RS19895;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD853_RS19895;partial=true;pseudo=true;start_range=.,1066 NZ_CPUY01000044.1 Protein Homology CDS 1066 1621 . - 0 ID=cds-AD853_RS19895;Parent=gene-AD853_RS19895;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001179707.1;locus_tag=AD853_RS19895;partial=true;product=IS110 family RNA-guided transposase;pseudo=true;start_range=.,1066;transl_table=11 NZ_CPUY01000044.1 RefSeq gene 1602 1727 . + . ID=gene-AD853_RS22400;Name=AD853_RS22400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS22400 NZ_CPUY01000044.1 GeneMarkS-2+ CDS 1602 1727 . + 0 ID=cds-WP_258179035.1;Parent=gene-AD853_RS22400;Dbxref=GenBank:WP_258179035.1;Name=WP_258179035.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AD853_RS22400;product=hypothetical protein;protein_id=WP_258179035.1;transl_table=11 NZ_CPUY01000044.1 RefSeq gene 1724 2038 . - . ID=gene-AD853_RS19900;Name=AD853_RS19900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS19900;old_locus_tag=ERS008462_04014 NZ_CPUY01000044.1 Protein Homology CDS 1724 2038 . - 0 ID=cds-WP_012304359.1;Parent=gene-AD853_RS19900;Dbxref=GenBank:WP_012304359.1;Name=WP_012304359.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002223532.1;locus_tag=AD853_RS19900;product=hypothetical protein;protein_id=WP_012304359.1;transl_table=11 NZ_CPUY01000044.1 RefSeq gene 2156 2419 . - . ID=gene-AD853_RS21685;Name=AD853_RS21685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS21685 NZ_CPUY01000044.1 GeneMarkS-2+ CDS 2156 2419 . - 0 ID=cds-WP_155406239.1;Parent=gene-AD853_RS21685;Dbxref=GenBank:WP_155406239.1;Name=WP_155406239.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AD853_RS21685;product=hypothetical protein;protein_id=WP_155406239.1;transl_table=11 NZ_CPUY01000044.1 RefSeq gene 2412 2738 . - . ID=gene-AD853_RS19910;Name=AD853_RS19910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS19910;old_locus_tag=ERS008462_04016 NZ_CPUY01000044.1 Protein Homology CDS 2412 2738 . - 0 ID=cds-WP_038824764.1;Parent=gene-AD853_RS19910;Dbxref=GenBank:WP_038824764.1;Name=WP_038824764.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016256670.1;locus_tag=AD853_RS19910;product=hypothetical protein;protein_id=WP_038824764.1;transl_table=11 NZ_CPUY01000044.1 RefSeq gene 2772 2984 . - . ID=gene-AD853_RS19915;Name=AD853_RS19915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS19915;old_locus_tag=ERS008462_04017 NZ_CPUY01000044.1 Protein Homology CDS 2772 2984 . - 0 ID=cds-WP_050124674.1;Parent=gene-AD853_RS19915;Dbxref=GenBank:WP_050124674.1;Name=WP_050124674.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002230690.1;locus_tag=AD853_RS19915;product=hypothetical protein;protein_id=WP_050124674.1;transl_table=11 NZ_CPUY01000044.1 RefSeq pseudogene 3438 3945 . - . ID=gene-AD853_RS21240;Name=AD853_RS21240;end_range=3945,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD853_RS21240;partial=true;pseudo=true NZ_CPUY01000044.1 Protein Homology CDS 3438 3945 . - 0 ID=cds-AD853_RS21240;Parent=gene-AD853_RS21240;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004803;end_range=3945,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611138.1;locus_tag=AD853_RS21240;partial=true;product=IS630 family transposase;pseudo=true;transl_table=11 NZ_CPUY01000044.1 RefSeq pseudogene 3946 4062 . - . ID=gene-AD853_RS22725;Name=AD853_RS22725;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD853_RS22725;partial=true;pseudo=true;start_range=.,3946 NZ_CPUY01000044.1 Protein Homology CDS 3946 4062 . - 0 ID=cds-AD853_RS22725;Parent=gene-AD853_RS22725;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001179707.1;locus_tag=AD853_RS22725;partial=true;product=IS110 family transposase;pseudo=true;start_range=.,3946;transl_table=11 ##sequence-region NZ_CPUY01000045.1 1 3830 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=633 NZ_CPUY01000045.1 RefSeq region 1 3830 . + . ID=NZ_CPUY01000045.1:1..3830;Dbxref=taxon:633;collection-date=1900/2008;country=South Africa;gbkey=Src;genome=genomic;isolation-source=not known;mol_type=genomic DNA;nat-host=pig;serovar=O:3;strain=IP32544 NZ_CPUY01000045.1 RefSeq gene 369 1019 . - . ID=gene-AD853_RS19935;Name=tetR(A);gbkey=Gene;gene=tetR(A);gene_biotype=protein_coding;locus_tag=AD853_RS19935;old_locus_tag=ERS008462_04021 NZ_CPUY01000045.1 Protein Homology CDS 369 1019 . - 0 ID=cds-WP_000164043.1;Parent=gene-AD853_RS19935;Dbxref=GenBank:WP_000164043.1;Name=WP_000164043.1;gbkey=CDS;gene=tetR(A);inference=COORDINATES: similar to AA sequence:RefSeq:WP_000164043.1;locus_tag=AD853_RS19935;product=tetracycline resistance transcriptional repressor TetR(A);protein_id=WP_000164043.1;transl_table=11 NZ_CPUY01000045.1 RefSeq gene 1125 2324 . + . ID=gene-AD853_RS19940;Name=tet(A);gbkey=Gene;gene=tet(A);gene_biotype=protein_coding;locus_tag=AD853_RS19940;old_locus_tag=ERS008462_04022 NZ_CPUY01000045.1 Protein Homology CDS 1125 2324 . + 0 ID=cds-WP_000804064.1;Parent=gene-AD853_RS19940;Dbxref=GenBank:WP_000804064.1;Name=WP_000804064.1;Ontology_term=GO:0015904,GO:0008493;gbkey=CDS;gene=tet(A);go_function=tetracycline transmembrane transporter activity|0008493||IEA;go_process=tetracycline transmembrane transport|0015904||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000804064.1;locus_tag=AD853_RS19940;product=tetracycline efflux MFS transporter Tet(A);protein_id=WP_000804064.1;transl_table=11 NZ_CPUY01000045.1 RefSeq gene 2356 3240 . - . ID=gene-AD853_RS19945;Name=AD853_RS19945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS19945;old_locus_tag=ERS008462_04023 NZ_CPUY01000045.1 Protein Homology CDS 2356 3240 . - 0 ID=cds-WP_000058717.1;Parent=gene-AD853_RS19945;Dbxref=GenBank:WP_000058717.1;Name=WP_000058717.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000058717.1;locus_tag=AD853_RS19945;product=DMT family transporter;protein_id=WP_000058717.1;transl_table=11 NZ_CPUY01000045.1 RefSeq gene 3378 3830 . - . ID=gene-AD853_RS19950;Name=AD853_RS19950;end_range=3830,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS19950;partial=true NZ_CPUY01000045.1 Protein Homology CDS 3378 3830 . - 0 ID=cds-WP_230674895.1;Parent=gene-AD853_RS19950;Dbxref=GenBank:WP_230674895.1;Name=WP_230674895.1;Ontology_term=GO:0016787;end_range=3830,.;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: protein motif:HMM:NF013053.7;locus_tag=AD853_RS19950;partial=true;product=cysteine hydrolase family protein;protein_id=WP_230674895.1;transl_table=11 ##sequence-region NZ_CPUY01000046.1 1 3033 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=633 NZ_CPUY01000046.1 RefSeq region 1 3033 . + . ID=NZ_CPUY01000046.1:1..3033;Dbxref=taxon:633;collection-date=1900/2008;country=South Africa;gbkey=Src;genome=genomic;isolation-source=not known;mol_type=genomic DNA;nat-host=pig;serovar=O:3;strain=IP32544 NZ_CPUY01000046.1 RefSeq gene 190 915 . - . ID=gene-AD853_RS19955;Name=AD853_RS19955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS19955;old_locus_tag=ERS008462_04024 NZ_CPUY01000046.1 Protein Homology CDS 190 915 . - 0 ID=cds-WP_011192754.1;Parent=gene-AD853_RS19955;Dbxref=GenBank:WP_011192754.1;Name=WP_011192754.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192754.1;locus_tag=AD853_RS19955;product=hypothetical protein;protein_id=WP_011192754.1;transl_table=11 NZ_CPUY01000046.1 RefSeq gene 918 1625 . - . ID=gene-AD853_RS19960;Name=AD853_RS19960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS19960;old_locus_tag=ERS008462_04025 NZ_CPUY01000046.1 Protein Homology CDS 918 1625 . - 0 ID=cds-WP_038825326.1;Parent=gene-AD853_RS19960;Dbxref=GenBank:WP_038825326.1;Name=WP_038825326.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192755.1;locus_tag=AD853_RS19960;product=hypothetical protein;protein_id=WP_038825326.1;transl_table=11 NZ_CPUY01000046.1 RefSeq gene 1622 2293 . - . ID=gene-AD853_RS19965;Name=AD853_RS19965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS19965;old_locus_tag=ERS008462_04026 NZ_CPUY01000046.1 Protein Homology CDS 1622 2293 . - 0 ID=cds-WP_011192756.1;Parent=gene-AD853_RS19965;Dbxref=GenBank:WP_011192756.1;Name=WP_011192756.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192756.1;locus_tag=AD853_RS19965;product=helix-turn-helix domain-containing protein;protein_id=WP_011192756.1;transl_table=11 NZ_CPUY01000046.1 RefSeq pseudogene 2441 2958 . + . ID=gene-AD853_RS21695;Name=AD853_RS21695;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD853_RS21695;partial=true;pseudo=true;start_range=.,2441 NZ_CPUY01000046.1 Protein Homology CDS 2441 2958 . + 0 ID=cds-AD853_RS21695;Parent=gene-AD853_RS21695;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_039289737.1;locus_tag=AD853_RS21695;partial=true;product=IS630 family transposase;pseudo=true;start_range=.,2441;transl_table=11 ##sequence-region NZ_CPUY01000047.1 1 2428 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=633 NZ_CPUY01000047.1 RefSeq region 1 2428 . + . ID=NZ_CPUY01000047.1:1..2428;Dbxref=taxon:633;collection-date=1900/2008;country=South Africa;gbkey=Src;genome=genomic;isolation-source=not known;mol_type=genomic DNA;nat-host=pig;serovar=O:3;strain=IP32544 NZ_CPUY01000047.1 RefSeq gene 170 721 . + . ID=gene-AD853_RS19975;Name=AD853_RS19975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS19975;old_locus_tag=ERS008462_04029 NZ_CPUY01000047.1 Protein Homology CDS 170 721 . + 0 ID=cds-WP_050124676.1;Parent=gene-AD853_RS19975;Dbxref=GenBank:WP_050124676.1;Name=WP_050124676.1;Ontology_term=GO:0006310,GO:0000150,GO:0003677;gbkey=CDS;go_function=DNA strand exchange activity|0000150||IEA,DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012228742.1;locus_tag=AD853_RS19975;product=recombinase family protein;protein_id=WP_050124676.1;transl_table=11 NZ_CPUY01000047.1 RefSeq gene 740 1204 . + . ID=gene-AD853_RS19980;Name=AD853_RS19980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS19980;old_locus_tag=ERS008462_04030 NZ_CPUY01000047.1 Protein Homology CDS 740 1204 . + 0 ID=cds-WP_050124677.1;Parent=gene-AD853_RS19980;Dbxref=GenBank:WP_050124677.1;Name=WP_050124677.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012414143.1;locus_tag=AD853_RS19980;product=hypothetical protein;protein_id=WP_050124677.1;transl_table=11 NZ_CPUY01000047.1 RefSeq gene 1343 1672 . + . ID=gene-AD853_RS19985;Name=AD853_RS19985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS19985;old_locus_tag=ERS008462_04031 NZ_CPUY01000047.1 Protein Homology CDS 1343 1672 . + 0 ID=cds-WP_042592529.1;Parent=gene-AD853_RS19985;Dbxref=GenBank:WP_042592529.1;Name=WP_042592529.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002229829.1;locus_tag=AD853_RS19985;product=hypothetical protein;protein_id=WP_042592529.1;transl_table=11 NZ_CPUY01000047.1 RefSeq pseudogene 1772 2428 . + . ID=gene-AD853_RS21700;Name=AD853_RS21700;end_range=2428,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD853_RS21700;partial=true;pseudo=true NZ_CPUY01000047.1 Protein Homology CDS 1772 2428 . + 0 ID=cds-AD853_RS21700;Parent=gene-AD853_RS21700;Note=frameshifted%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=2428,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611504.1;locus_tag=AD853_RS21700;partial=true;product=IS3-like element ISYpe1 family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_CPUY01000048.1 1 2062 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=633 NZ_CPUY01000048.1 RefSeq region 1 2062 . + . ID=NZ_CPUY01000048.1:1..2062;Dbxref=taxon:633;collection-date=1900/2008;country=South Africa;gbkey=Src;genome=genomic;isolation-source=not known;mol_type=genomic DNA;nat-host=pig;serovar=O:3;strain=IP32544 NZ_CPUY01000048.1 RefSeq pseudogene 1 1364 . - . ID=gene-AD853_RS20000;Name=AD853_RS20000;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD853_RS20000;partial=true;pseudo=true;start_range=.,1 NZ_CPUY01000048.1 Protein Homology CDS 1 1364 . - 0 ID=cds-AD853_RS20000;Parent=gene-AD853_RS20000;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002215508.1;locus_tag=AD853_RS20000;partial=true;product=outer membrane autotransporter barrel domain-containing protein;pseudo=true;start_range=.,1;transl_table=11 NZ_CPUY01000048.1 RefSeq gene 1950 2062 . - . ID=gene-AD853_RS22730;Name=AD853_RS22730;end_range=2062,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS22730;partial=true NZ_CPUY01000048.1 Protein Homology CDS 1950 2062 . - 2 ID=cds-WP_155406240.1;Parent=gene-AD853_RS22730;Dbxref=GenBank:WP_155406240.1;Name=WP_155406240.1;Ontology_term=GO:0019867;end_range=2062,.;gbkey=CDS;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192809.1;locus_tag=AD853_RS22730;partial=true;product=autotransporter outer membrane beta-barrel domain-containing protein;protein_id=WP_155406240.1;transl_table=11 ##sequence-region NZ_CPUY01000049.1 1 1203 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=633 NZ_CPUY01000049.1 RefSeq region 1 1203 . + . ID=NZ_CPUY01000049.1:1..1203;Dbxref=taxon:633;collection-date=1900/2008;country=South Africa;gbkey=Src;genome=genomic;isolation-source=not known;mol_type=genomic DNA;nat-host=pig;serovar=O:3;strain=IP32544 NZ_CPUY01000049.1 RefSeq gene 18 980 . - . ID=gene-AD853_RS20005;Name=AD853_RS20005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS20005;old_locus_tag=ERS008462_04033 NZ_CPUY01000049.1 Protein Homology CDS 18 980 . - 0 ID=cds-WP_038823813.1;Parent=gene-AD853_RS20005;Dbxref=GenBank:WP_038823813.1;Name=WP_038823813.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: protein motif:HMM:NF033542.1;locus_tag=AD853_RS20005;product=IS110 family RNA-guided transposase;protein_id=WP_038823813.1;transl_table=11 ##sequence-region NZ_CPUY01000050.1 1 1078 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=633 NZ_CPUY01000050.1 RefSeq region 1 1078 . + . ID=NZ_CPUY01000050.1:1..1078;Dbxref=taxon:633;collection-date=1900/2008;country=South Africa;gbkey=Src;genome=genomic;isolation-source=not known;mol_type=genomic DNA;nat-host=pig;serovar=O:3;strain=IP32544 NZ_CPUY01000050.1 RefSeq gene 150 659 . + . ID=gene-AD853_RS20010;Name=AD853_RS20010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS20010;old_locus_tag=ERS008462_04034 NZ_CPUY01000050.1 Protein Homology CDS 150 659 . + 0 ID=cds-WP_000129958.1;Parent=gene-AD853_RS20010;Dbxref=GenBank:WP_000129958.1;Name=WP_000129958.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000129958.1;locus_tag=AD853_RS20010;product=antirestriction protein ArdA;protein_id=WP_000129958.1;transl_table=11 ##sequence-region NZ_CPUY01000051.1 1 905 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=633 NZ_CPUY01000051.1 RefSeq region 1 905 . + . ID=NZ_CPUY01000051.1:1..905;Dbxref=taxon:633;collection-date=1900/2008;country=South Africa;gbkey=Src;genome=genomic;isolation-source=not known;mol_type=genomic DNA;nat-host=pig;serovar=O:3;strain=IP32544 NZ_CPUY01000051.1 RefSeq gene 83 379 . + . ID=gene-AD853_RS20015;Name=ccgD;gbkey=Gene;gene=ccgD;gene_biotype=protein_coding;locus_tag=AD853_RS20015;old_locus_tag=ERS008462_04035 NZ_CPUY01000051.1 Protein Homology CDS 83 379 . + 0 ID=cds-WP_000545925.1;Parent=gene-AD853_RS20015;Dbxref=GenBank:WP_000545925.1;Name=WP_000545925.1;gbkey=CDS;gene=ccgD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000545925.1;locus_tag=AD853_RS20015;product=protein CcgD;protein_id=WP_000545925.1;transl_table=11 NZ_CPUY01000051.1 RefSeq gene 512 796 . + . ID=gene-AD853_RS20020;Name=ccgC;gbkey=Gene;gene=ccgC;gene_biotype=protein_coding;locus_tag=AD853_RS20020;old_locus_tag=ERS008462_04036 NZ_CPUY01000051.1 Protein Homology CDS 512 796 . + 0 ID=cds-WP_000274934.1;Parent=gene-AD853_RS20020;Dbxref=GenBank:WP_000274934.1;Name=WP_000274934.1;gbkey=CDS;gene=ccgC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000274934.1;locus_tag=AD853_RS20020;product=protein CcgC;protein_id=WP_000274934.1;transl_table=11 ##sequence-region NZ_CPUY01000052.1 1 586 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=633 NZ_CPUY01000052.1 RefSeq region 1 586 . + . ID=NZ_CPUY01000052.1:1..586;Dbxref=taxon:633;collection-date=1900/2008;country=South Africa;gbkey=Src;genome=genomic;isolation-source=not known;mol_type=genomic DNA;nat-host=pig;serovar=O:3;strain=IP32544 NZ_CPUY01000052.1 RefSeq gene 334 449 . - . ID=gene-AD853_RS20025;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=AD853_RS20025;old_locus_tag=ERS008462_04037 NZ_CPUY01000052.1 cmsearch rRNA 334 449 . - . ID=rna-AD853_RS20025;Parent=gene-AD853_RS20025;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD853_RS20025;product=5S ribosomal RNA NZ_CPUY01000052.1 cmsearch exon 334 449 . - . ID=exon-AD853_RS20025-1;Parent=rna-AD853_RS20025;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD853_RS20025;product=5S ribosomal RNA NZ_CPUY01000052.1 RefSeq gene 490 565 . - . ID=gene-AD853_RS20030;Name=AD853_RS20030;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD853_RS20030;old_locus_tag=ERS008462_04038 NZ_CPUY01000052.1 tRNAscan-SE tRNA 490 565 . - . ID=rna-AD853_RS20030;Parent=gene-AD853_RS20030;anticodon=(pos:complement(530..532));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD853_RS20030;product=tRNA-Thr NZ_CPUY01000052.1 tRNAscan-SE exon 490 565 . - . ID=exon-AD853_RS20030-1;Parent=rna-AD853_RS20030;anticodon=(pos:complement(530..532));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD853_RS20030;product=tRNA-Thr ##sequence-region NZ_CPUY01000053.1 1 563 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=633 NZ_CPUY01000053.1 RefSeq region 1 563 . + . ID=NZ_CPUY01000053.1:1..563;Dbxref=taxon:633;collection-date=1900/2008;country=South Africa;gbkey=Src;genome=genomic;isolation-source=not known;mol_type=genomic DNA;nat-host=pig;serovar=O:3;strain=IP32544 NZ_CPUY01000053.1 RefSeq gene 1 563 . + . ID=gene-AD853_RS20035;Name=AD853_RS20035;end_range=563,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS20035;partial=true;start_range=.,1 NZ_CPUY01000053.1 Protein Homology CDS 1 563 . + 2 ID=cds-WP_155406241.1;Parent=gene-AD853_RS20035;Dbxref=GenBank:WP_155406241.1;Name=WP_155406241.1;Ontology_term=GO:0019867;end_range=563,.;gbkey=CDS;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192809.1;locus_tag=AD853_RS20035;partial=true;product=autotransporter outer membrane beta-barrel domain-containing protein;protein_id=WP_155406241.1;start_range=.,1;transl_table=11 ##sequence-region NZ_CPUY01000054.1 1 461 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=633 NZ_CPUY01000054.1 RefSeq region 1 461 . + . ID=NZ_CPUY01000054.1:1..461;Dbxref=taxon:633;collection-date=1900/2008;country=South Africa;gbkey=Src;genome=genomic;isolation-source=not known;mol_type=genomic DNA;nat-host=pig;serovar=O:3;strain=IP32544 NZ_CPUY01000054.1 RefSeq gene 127 202 . - . ID=gene-AD853_RS20040;Name=AD853_RS20040;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD853_RS20040;old_locus_tag=ERS008462_04039 NZ_CPUY01000054.1 tRNAscan-SE tRNA 127 202 . - . ID=rna-AD853_RS20040;Parent=gene-AD853_RS20040;anticodon=(pos:complement(167..169));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD853_RS20040;product=tRNA-Ala NZ_CPUY01000054.1 tRNAscan-SE exon 127 202 . - . ID=exon-AD853_RS20040-1;Parent=rna-AD853_RS20040;anticodon=(pos:complement(167..169));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD853_RS20040;product=tRNA-Ala NZ_CPUY01000054.1 RefSeq gene 254 330 . - . ID=gene-AD853_RS20045;Name=AD853_RS20045;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD853_RS20045;old_locus_tag=ERS008462_04040 NZ_CPUY01000054.1 tRNAscan-SE tRNA 254 330 . - . ID=rna-AD853_RS20045;Parent=gene-AD853_RS20045;anticodon=(pos:complement(294..296));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD853_RS20045;product=tRNA-Ile NZ_CPUY01000054.1 tRNAscan-SE exon 254 330 . - . ID=exon-AD853_RS20045-1;Parent=rna-AD853_RS20045;anticodon=(pos:complement(294..296));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD853_RS20045;product=tRNA-Ile ##sequence-region NZ_CPUY01000055.1 1 351 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=633 NZ_CPUY01000055.1 RefSeq region 1 351 . + . ID=NZ_CPUY01000055.1:1..351;Dbxref=taxon:633;collection-date=1900/2008;country=South Africa;gbkey=Src;genome=genomic;isolation-source=not known;mol_type=genomic DNA;nat-host=pig;serovar=O:3;strain=IP32544 NZ_CPUY01000055.1 RefSeq gene 1 351 . - . ID=gene-AD853_RS20050;Name=AD853_RS20050;end_range=351,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD853_RS20050;partial=true;start_range=.,1 NZ_CPUY01000055.1 Protein Homology CDS 1 351 . - 0 ID=cds-WP_155406242.1;Parent=gene-AD853_RS20050;Dbxref=GenBank:WP_155406242.1;Name=WP_155406242.1;end_range=351,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011193253.1;locus_tag=AD853_RS20050;partial=true;product=Ig-like domain-containing protein;protein_id=WP_155406242.1;start_range=.,1;transl_table=11 ###