Heterocephalus glaber
naked mole-rat
taxon 10181Indigenous / local names
No local or indigenous names recorded yet.
Taxonomic classification
Genome browser
The assembly file for Heterocephalus glaber hasn't finished reaching the Hub yet — check back shortly.
Sequence records
transcriptome (fasta)
mirroredOrigin: hub
0 downloads
First synced: 8/21/2026 · Last updated: 8/21/2026
Source: NCBI XM_087204204.1 · View at source ↗
Released: 2026-08-17
publiccc0AFDSI-SEQ-37Publicly accessible — no request needed.
genome (fasta)
mirroredOrigin: hub
3 downloads
First synced: 8/21/2026 · Last updated: 8/21/2026
Source: NCBI GCA_944319725.1 · View at source ↗
Collection: · Sex: male
Sequencing: Oxford Nanopore long read WGS, Phased 10X-linked read WGS, Hi-C seq · TrioCanu, Flye, Scaff10x, Salsa2, 3dDNA, minimap, racon, medaka, freebayes, mitoVGP · 55x coverage
Released: 2022-07-01 · Submitted by: hospital for sick children
publiccc0AFDSI-SEQ-3GoaT: Scaffold assembly · 2.56 Gb · scaffold N50 35,055,060 · View at source ↗
Publicly accessible — no request needed.
Proteins (6)
APOE — 299 aa
ASAH1 — 395 aa
Has2 — 552 aa
Apoc3 — 107 aa
Apoa2 — 101 aa
Apoa1 — 264 aa
No AlphaFold DB proteome found for this species.
Proteomics (external sources)
PRIDE — project-level reference (metadata only; no per-protein identifications are available via PRIDE's public API)
Automated 16plex plasma proteomics with real-time search and ion mobility mass spectrometry enables large scale profiling in naked mole-rats and mice. (PXD022891) ↗AFDSI-PROJREF-13
Species comparison of liver proteomes reveals links to naked mole-rat longevity and human aging (PXD008720) ↗AFDSI-PROJREF-14
Global analysis of protein degradation rates in primary rodent skin fibroblasts (PXD007598) ↗AFDSI-PROJREF-15
In-gel proteomics to verify amylase protein in naked mole-rat and mouse tissue (PXD052477) ↗AFDSI-PROJREF-519
Metabolic Profiles (external sources)
KEGG: KEGG genome-based metabolic profile (hgl) (View at source ↗) — Genome-based pathway inference (KEGG) — reflects which metabolic pathways this species' annotated genes place it in, not experimentally measured metabolite presenceAFDSI-METABPROF-13
Protein Structures
APOE — v1
pLDDT confidence: 78.4
Auto-synced from AlphaFold DB AF-G5CBM7-F1 · View at source ↗
publiccc_byAFDSI-STRUCT-504-V1ASAH1 — v1
pLDDT confidence: 92.6
Auto-synced from AlphaFold DB AF-A0A0P6JG37-F1 · View at source ↗
publiccc_byAFDSI-STRUCT-505-V1Has2 — v1
pLDDT confidence: 90.9
Auto-synced from AlphaFold DB AF-G5AY81-F1 · View at source ↗
publiccc_byAFDSI-STRUCT-506-V1Apoc3 — v1
pLDDT confidence: 64.8
Auto-synced from AlphaFold DB AF-G5BQH4-F1 · View at source ↗
publiccc_byAFDSI-STRUCT-507-V1Apoa2 — v1
pLDDT confidence: 74.1
Auto-synced from AlphaFold DB AF-G5BWH8-F1 · View at source ↗
publiccc_byAFDSI-STRUCT-508-V1Field & Specimen Imaging
camera_trap at Kenya · Source: GBIF 6163222041 (View at source ↗)AFDSI-IMG-61
camera_trap at Kenya · Source: GBIF 6431660442 (View at source ↗)AFDSI-IMG-62
camera_trap at Kenya · Source: GBIF 6431563037 (View at source ↗)AFDSI-IMG-63
camera_trap at Kenya · Source: GBIF 6133428249 (View at source ↗)AFDSI-IMG-64
camera_trap at Kenya · Source: GBIF 6133180944 (View at source ↗)AFDSI-IMG-65
herbarium at Kenya · Source: GBIF 1919697718 (View at source ↗)AFDSI-IMG-369
camera_trap at Kenya · Source: GBIF 6133191862 (View at source ↗)AFDSI-IMG-167
camera_trap at Kenya · Source: GBIF 6133510750 (View at source ↗)AFDSI-IMG-168
camera_trap at Kenya · Source: GBIF 5069721087 (View at source ↗)AFDSI-IMG-169
camera_trap at Kenya · Source: GBIF 6133296614 (View at source ↗)AFDSI-IMG-170
Cellular & Molecular Imaging (external sources)
BioImage Archive: Darwin Tree of Life - NHM samples image catalogue (View on source archive ↗)AFDSI-CELL-5
Geographic range (Africa)
429 real GBIF-recorded occurrences across Africa — see this species on GBIF ↗.
This reflects real occurrence records submitted to GBIF, not a comprehensive range map — sampling effort varies significantly by country and region, so an absence here doesn't mean the species isn't present.