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Panthera leo

lion

taxon 9689

Indigenous / local names

Genome browser

The assembly file for Panthera leohasn't finished reaching the Hub yet — check back shortly.

Sequence records

genome (fasta)

mirrored

Origin: hub

Source: NCBI GCA_046254995.1 · View at source ↗

publiccc0AFDSI-SEQ-13

GoaT: Chromosome assembly · 2.30 Gb · scaffold N50 147,402,474 · 19 chromosomes · View at source ↗

Publicly accessible — no request needed.

Proteins (50)

HBB1 146 aa

HBA 142 aa

HBB2 146 aa

TPMT 245 aa

MT-CYB 379 aa

protein 115 112 aa

HDAC3 428 aa

ATG5 275 aa

HPGD 266 aa

VDAC1 283 aa

genome (fasta)

mirrored

Origin: hub

Source: NCBI GCA_018350215.1 · View at source ↗

publiccc0AFDSI-SEQ-15

GoaT: Chromosome assembly · 2.30 Gb · scaffold N50 147,402,474 · 19 chromosomes · View at source ↗

Publicly accessible — no request needed.

transcriptome (fasta)

mirrored

Origin: hub

Source: NCBI PV641772.1 · View at source ↗

publiccc0AFDSI-SEQ-41

Publicly accessible — no request needed.

Proteomics (external sources)

PRIDE— project-level reference (metadata only; no per-protein identifications are available via PRIDE's public API)

Proteomic data: The Japanese Archipelago sheltered cave lions, not tigers, during the Late Pleistocene (PXD065297) ↗AFDSI-PROJREF-33

COL1 database samples for the Late Pleistocene of Western Eurasia (PXD003190) ↗AFDSI-PROJREF-34

Identifying sources of tick blood meals using unidentified tandem mass spectral libraries (PXD000170) ↗AFDSI-PROJREF-35

Metabolic Profiles (external sources)

KEGG: KEGG genome-based metabolic profile (plez) (View at source ↗) — Genome-based pathway inference (KEGG) — reflects which metabolic pathways this species' annotated genes place it in, not experimentally measured metabolite presenceAFDSI-METABPROF-16

Protein Structures

HBB1 — v1

pLDDT confidence: 97.4

Auto-synced from AlphaFold DB AF-P68050-F1 · View at source ↗

publiccc_byAFDSI-STRUCT-194-V1

HBA — v1

pLDDT confidence: 97.9

Auto-synced from AlphaFold DB AF-P18975-F1 · View at source ↗

publiccc_byAFDSI-STRUCT-195-V1

HBB2 — v1

pLDDT confidence: 97.2

Auto-synced from AlphaFold DB AF-P18988-F1 · View at source ↗

publiccc_byAFDSI-STRUCT-196-V1

TPMT — v1

pLDDT confidence: 94.5

Auto-synced from AlphaFold DB AF-Q3BCR0-F1 · View at source ↗

publiccc_byAFDSI-STRUCT-197-V1

MT-CYB — v1

pLDDT confidence: 97.9

Auto-synced from AlphaFold DB AF-Q35506-F1 · View at source ↗

publiccc_byAFDSI-STRUCT-198-V1

Field & Specimen Imaging

camera_trap at South Africa · Source: GBIF 5938104699 (View at source ↗)AFDSI-IMG-81

camera_trap at South Africa · Source: GBIF 5938252120 (View at source ↗)AFDSI-IMG-82

camera_trap at Tanzania, United Republic of · Source: GBIF 5938302574 (View at source ↗)AFDSI-IMG-83

camera_trap at South Africa · Source: GBIF 5938306747 (View at source ↗)AFDSI-IMG-84

camera_trap at Tanzania, United Republic of · Source: GBIF 5938326058 (View at source ↗)AFDSI-IMG-85

Cellular & Molecular Imaging (external sources)

BioImage Archive: Stratum corneum nanotexture feature detection using deep learning and spatial analysis: a non-invasive tool for skin barrier assessment (View on source archive ↗)AFDSI-CELL-6

BioImage Archive: Polyphasic Characterization and Biotechnological Potential of Three Novel Prochlorococcaceae (Cyanobacteria) Genera: An Integrative Taxonomic Approach Combining 16S rRNA gene, Genomic and Chemotaxonomic Analyses (View on source archive ↗)AFDSI-CELL-7

BioImage Archive: Single-cell morphodynamics predict cell fate decisions during mucociliary epithelial differentiation (View on source archive ↗)AFDSI-CELL-8

BioImage Archive: Optogenetic control of a GEF of RhoA uncovers a signaling switch from retraction to protrusion (View on source archive ↗)AFDSI-CELL-9

BioImage Archive: High Content 3D Imaging by Dual-View Oblique Plane Microscopy (View on source archive ↗)AFDSI-CELL-10

Geographic range (Africa)

16,381 real GBIF-recorded occurrences across Africa — see this species on GBIF ↗.