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Benefit-sharing from DSI rests on the provider country's national framework. Where it requires bilateral benefit-sharing for DSI, those terms apply. Where it gives effect to the CBD multilateral mechanism, users of its publicly available DSI should share benefits through it: all users non-monetary benefits, as appropriate, and commercial users above set size thresholds also monetary contributions to the Cali Fund. Where it is silent on DSI, the position is not yet settled: check with the country's competent national authority, through the ABS service. Any terms agreed when the genetic resources were accessed still apply. Access and benefit-sharing questions are handled by the ABS service, not by the DataBank. Learn more →
taxon 5755Also known as: Acanthamoeba castellani
No local or indigenous names recorded yet.
Not yet assessed
Occurrence records: Recorded outside Africa only. 0 of 317 GBIF records (0%) are from Africa (checked 10/9/2026). A hint from GBIF and the genomes on this Hub, not an assessment: GBIF includes zoo and travel records.
No closely related species are in the DataBank yet. See it in the species tree.
Origin: hub
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First synced: 8/26/2026 · Last updated: 8/26/2026
Source: NCBI GCA_937900865.1 · View at source ↗
Collection: South Africa
Sequencing: Illumina HiSeq 2500 · metaspadesv3.12.0 · 5x coverage
Released: 2023-01-12 · Submitted by: European Bioinformatics Institute
publiccc0AFDSI-SEQ-167 Benefit-sharing under CBD Decision 16/2 and national frameworks →Country of origin: ZA · PIC: unknown · MAT: unknown
GoaT: Contig assembly · 0.05 Gb · scaffold N50 465,313 · View at source ↗
Publicly accessible — no request needed.
protein 3906 — 126 aa
MIB — 1147 aa
MIC — 1168 aa
protein 3909 — 138 aa
protein 3910 — 375 aa
protein 3911 — 19 aa
COX1/2 — 873 aa
protein 3913 — 1509 aa
protein 3914 — 126 aa
protein 3915 — 126 aa
Origin: hub
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First synced: 8/26/2026 · Last updated: 8/26/2026
Source: NCBI OK570082.1 · View at source ↗
Released: 2022-12-06
publiccc0AFDSI-SEQ-685 Country of origin not recorded: see how benefit-sharing works →Publicly accessible — no request needed.
No AlphaFold DB proteome found for this species.
PRIDE — project-level reference (metadata only; no per-protein identifications are available via PRIDE's public API)
Diversity and evolution of chromatin regulatory states across eukaryotes (PXD069944) ↗AFDSI-PROJREF-70
Integrative structural Interactomics reveals protein organization and structure in a giant virus (PXD064933) ↗AFDSI-PROJREF-74
MS-based identification of proteins localized in viral factory of mimivirus (PXD054803) ↗AFDSI-PROJREF-77
Molecular mechanisms of Acanthamoeba castellanii response to different sources of oxidative stress. (PXD052473) ↗AFDSI-PROJREF-78
MS-based proteomic characterization of Megavirus chilensis virions prepared from cells coinfected or not with Zamilon vitis (PXD052049) ↗AFDSI-PROJREF-79
ChEMBL rows are compounds active against a protein target from this organism — not confirmed as compounds the species itself produces, unlike ANPDB's.
ChEMBL: CHEMBL539204 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; Activity 2.0AFDSI-METABOLOMICS-560
ChEMBL: CHEMBL1328324 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; IC50 83000.0 nMAFDSI-METABOLOMICS-561
KEGG: KEGG genome-based metabolic profile (acan) (View at source ↗) — Genome-based pathway inference (KEGG) — reflects which metabolic pathways this species' annotated genes place it in, not experimentally measured metabolite presenceAFDSI-METABPROF-82
pLDDT confidence: unknown · ligands: PROTOPORPHYRIN IX CONTAINING FE
Auto-synced from PDBe 9zfs · View at source ↗
publiccc_byAFDSI-STRUCT-14742-V2pLDDT confidence: 97.5
Auto-synced from AlphaFold DB AF-P68696-F1 · View at source ↗
publiccc_byAFDSI-STRUCT-4460-V2pLDDT confidence: 77.6
Auto-synced from AlphaFold DB AF-P19706-F1 · View at source ↗
publiccc_byAFDSI-STRUCT-4461-V2pLDDT confidence: 95.3
Auto-synced from AlphaFold DB AF-P37167-F1 · View at source ↗
publiccc_byAFDSI-STRUCT-4463-V2pLDDT confidence: 95.3
Auto-synced from AlphaFold DB AF-P02578-F1 · View at source ↗
publiccc_byAFDSI-STRUCT-4464-V2BioImage Archive: Mitochondrial proteome of Acanthamoeba castellanii - the Acanthamoeba MitoCarta (View on source archive ↗)AFDSI-CELL-1267
CIL: Don Kaiser (2011) CIL:13094, Acanthamoeba castellanii, cell by organism, eukaryotic cell, amoeboid cell, Eukaryotic Protist. CIL. Dataset (View on source archive ↗)AFDSI-CELL-7553
CIL: Don Kaiser (2011) CIL:13092, Acanthamoeba castellanii, cell by organism, eukaryotic cell, amoeboid cell, Eukaryotic Protist. CIL. Dataset (View on source archive ↗)AFDSI-CELL-7554
CIL: Don Kaiser (2011) CIL:13093, Acanthamoeba castellanii, cell by organism, eukaryotic cell, amoeboid cell, Eukaryotic Protist. CIL. Dataset (View on source archive ↗)AFDSI-CELL-7555
CIL: Thelma Dunnebacke (2011) CIL:19326, Acanthamoeba castellanii, cell by organism, eukaryotic cell, Eukaryotic Protist, Amoeboid Protist. CIL. Dataset (View on source archive ↗)AFDSI-CELL-7556
No African occurrence records found for this species in GBIF — please confirm this is within this platform's African-origin/endemic/indigenous scope. This is a non-blocking, informational check only: GBIF coverage is real but imperfect, so a genuinely African species can still show no records here.
Genomes are often recorded at strain level. These entries belong to this species.
A node's own derived bioinformatics-analysis output (e.g. an SSR/microsatellite discovery archive) run against this species' own genome data — see the Derived Analysis page for the full catalog.
MegaSSR — ssr_discovery
derived from genome record AFDSI-SEQ-167
File: GCA_937900865.1_megassr_results.tar.gz
Tool version: MegaSSR v3.0.0 (UM6P patched)
Native — captured by Northern-MA-UM6P-8787752738 · View at source ↗
cc_by public Country of origin not recorded: see how benefit-sharing works →
AFDSI-ANALYSIS-18217