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Acanthamoeba castellanii

Also known as: Acanthamoeba castellani

Indigenous / local names

No local or indigenous names recorded yet.

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Sequence records

genome (fasta)

mirrored

Origin: hub

17 downloads

First synced: 8/26/2026 · Last updated: 8/26/2026

Source: NCBI GCA_937900865.1 · View at source ↗

Sequencing: Illumina HiSeq 2500 · metaspadesv3.12.0 · 5x coverage

publiccc0AFDSI-SEQ-167

GoaT: Contig assembly · 0.05 Gb · scaffold N50 465,313 · View at source ↗

Publicly accessible — no request needed.

transcriptome (fasta)

mirrored

Origin: hub

0 downloads

First synced: 8/26/2026 · Last updated: 8/26/2026

Source: NCBI OK570082.1 · View at source ↗

publiccc0AFDSI-SEQ-685

Publicly accessible — no request needed.

No AlphaFold DB proteome found for this species.

Proteomics (external sources)

PRIDE — project-level reference (metadata only; no per-protein identifications are available via PRIDE's public API)

Diversity and evolution of chromatin regulatory states across eukaryotes (PXD069944) ↗AFDSI-PROJREF-70

Proteomic characterization of Cedratvirus particles (PXD069162) ↗AFDSI-PROJREF-71

Elucidating the interaction network of mimivirus capsid proteins (PXD068780) ↗AFDSI-PROJREF-72

C. jejuni interaction with A. castellanii mitochondria (PXD065850) ↗AFDSI-PROJREF-73

Integrative structural Interactomics reveals protein organization and structure in a giant virus (PXD064933) ↗AFDSI-PROJREF-74

Proteomic Characterization of Naiavirus (PXD063493) ↗AFDSI-PROJREF-75

MS-based proteomic characterization of pacmanvirus lostcity virions (PXD054858) ↗AFDSI-PROJREF-76

MS-based identification of proteins localized in viral factory of mimivirus (PXD054803) ↗AFDSI-PROJREF-77

Molecular mechanisms of Acanthamoeba castellanii response to different sources of oxidative stress. (PXD052473) ↗AFDSI-PROJREF-78

MS-based proteomic characterization of Megavirus chilensis virions prepared from cells coinfected or not with Zamilon vitis (PXD052049) ↗AFDSI-PROJREF-79

Chemical Profiles (external sources)

ChEMBL rows are compounds active against a protein target from this organism — not confirmed as compounds the species itself produces, unlike ANPDB's.

ChEMBL: CHEMBL539204 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; Activity 2.0AFDSI-METABOLOMICS-560

ChEMBL: CHEMBL1328324 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; IC50 83000.0 nMAFDSI-METABOLOMICS-561

Metabolic Profiles (external sources)

KEGG: KEGG genome-based metabolic profile (acan) (View at source ↗) — Genome-based pathway inference (KEGG) — reflects which metabolic pathways this species' annotated genes place it in, not experimentally measured metabolite presenceAFDSI-METABPROF-82

Geographic range (Africa)

⚠ No African occurrence records found for this species in GBIF — please confirm this is within this platform's African-origin/endemic/indigenous scope. This is a non-blocking, informational check only: GBIF coverage is real but imperfect, so a genuinely African species can still show no records here.