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Hordeum vulgare

taxon 4513

Indigenous / local names

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The assembly file for Hordeum vulgare hasn't finished reaching the Hub yet — check back shortly.

Sequence records

genome (fasta)

mirrored

Origin: hub

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First synced: 8/26/2026 · Last updated: 8/26/2026

Source: NCBI GCA_949783315.1 · View at source ↗

Sequencing: Illumina Novaseq 6000, PacBio Sequel II · TRITEX (long-read) commit cf605a4 · 134x coverage

publiccc0AFDSI-SEQ-211

GoaT: Contig assembly · 0.16 Gb · scaffold N50 251 · BUSCO 1.5% complete · View at source ↗

Publicly accessible — no request needed.

transcriptome (fasta)

mirrored

Origin: hub

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First synced: 8/26/2026 · Last updated: 8/26/2026

Source: NCBI LC939281.1 · View at source ↗

publiccc0AFDSI-SEQ-687

Publicly accessible — no request needed.

No AlphaFold DB proteome found for this species.

Proteomics (external sources)

PRIDE — project-level reference (metadata only; no per-protein identifications are available via PRIDE's public API)

Temperature and Raw Material Impact on Gluten Digestibility and Immunoreactive Peptides in Wheat, Rye, and Barley (PXD080314) ↗AFDSI-PROJREF-188

Microbial proteins shape the dietary proteome of fermented foods (PXD070912) ↗AFDSI-PROJREF-189

Multi-omics of barley Fusarium Head Blight converge on pathogen-triggered biosynthesis of aromatic amino acid derived chemical defense compounds (PXD068736) ↗AFDSI-PROJREF-190

Proteomics Analysis of Celiac Disease-Active Peptides in Food Products with Partially Hydrolyzed Gluten (PXD068276) ↗AFDSI-PROJREF-191

Characterizing Peptidase Activity of Barley Endoprotease B in Complex Technical Matrices of the Beer Brewing Process (PXD067323) ↗AFDSI-PROJREF-192

What’s left from the brew? Investigating residual barley proteins in spent grains for downstream valorization opportunities (PXD062029) ↗AFDSI-PROJREF-193

Identification of celiac-disease active peptides in gluten-free beers by nanoLC-MS/MS (PXD059719) ↗AFDSI-PROJREF-194

Cross-Link of active PhK and GP (PXD059369) ↗AFDSI-PROJREF-195

Anionic phospholipids connect barley ROP signaling with resistance and susceptibility to fungal cell entry (PXD056811) ↗AFDSI-PROJREF-196

Plant Lipids Mediate Immune Responses to Fungal Lipids in Barley (PXD056788) ↗AFDSI-PROJREF-197

Chemical Profiles (external sources)

ChEMBL rows are compounds active against a protein target from this organism — not confirmed as compounds the species itself produces, unlike ANPDB's.

ChEMBL: (-)-CATECHIN (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; ActivityAFDSI-METABOLOMICS-369

ChEMBL: CIANIDANOL (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; ActivityAFDSI-METABOLOMICS-370

ChEMBL: QUERCETIN (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; ActivityAFDSI-METABOLOMICS-371

ChEMBL: MYRICETIN (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; ActivityAFDSI-METABOLOMICS-372

ChEMBL: 4,4'-DIHYDROXYCHALCONE (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; ActivityAFDSI-METABOLOMICS-373

ChEMBL: CHEMBL200292 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; ActivityAFDSI-METABOLOMICS-374

ChEMBL: 4-HYDROXYCHALCONE (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; ActivityAFDSI-METABOLOMICS-375

ChEMBL: CHEMBL147067 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; ActivityAFDSI-METABOLOMICS-376

ChEMBL: CHEMBL129510 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; ActivityAFDSI-METABOLOMICS-377

ChEMBL: CHEMBL197914 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; ActivityAFDSI-METABOLOMICS-378

ChEMBL: CHEMBL2270643 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; IC50 3.0 nMAFDSI-METABOLOMICS-379

ChEMBL: CHEMBL38166 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; Activity 1.5 uMAFDSI-METABOLOMICS-380

ChEMBL: PAPYRACILLIC ACID (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; ActivityAFDSI-METABOLOMICS-381

ChEMBL: (5S,8R,13S,16R)-(-)-PYRENOPHOROL (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; ActivityAFDSI-METABOLOMICS-382

ChEMBL: (8R,16R)-(-)-pyrenophorin (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; Ratio 1.4AFDSI-METABOLOMICS-383

ChEMBL: CHEMBL3616593 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; Ki 10000000.0 nMAFDSI-METABOLOMICS-384

Metabolic Profiles (external sources)

MetaboLights: Profiles of phenolic secondary metabolites in plants of barley (Hordeum vulgare L.) (View at source ↗)AFDSI-METABPROF-52

MetaboLights: The timing of bacterial mesophyll infection shapes the leaf chemical landscape during the interaction (View at source ↗)AFDSI-METABPROF-53

MetaboLights: Revealing the constituents of Egypt’s oldest beer using infrared and mass spectrometry (View at source ↗)AFDSI-METABPROF-54

MetaboLights: Environmental impacts on barley grain composition and longevity (View at source ↗)AFDSI-METABPROF-55

MetaboLights: Improvement of prediction ability by integrating multi-omic datasets in barley (View at source ↗)AFDSI-METABPROF-56

MetaboLights: Metabolomic Aspects of Conservative and Resistance-related Elements of Response to Fusarium culmorum in the Grass Family (View at source ↗)AFDSI-METABPROF-181

Cellular & Molecular Imaging (external sources)

BioImage Archive: SeedGerm-VIG Image Series (View on source archive ↗)AFDSI-CELL-429

BioImage Archive: CLAVATA signalling shapes barley inflorescence by controlling activity and determinacy of shoot meristem and rachilla (View on source archive ↗)AFDSI-CELL-430

BioImage Archive: (View on source archive ↗)AFDSI-CELL-431

BioImage Archive: NFDI4BIOIMAGE Calendar 2025 (View on source archive ↗)AFDSI-CELL-432

BioImage Archive: Darwin Tree of Life - NHM samples image catalogue (View on source archive ↗)AFDSI-CELL-433

Geographic range (Africa)

29,741 real GBIF-recorded occurrences across Africa — see this species on GBIF ↗.

This reflects real occurrence records submitted to GBIF, not a comprehensive range map — sampling effort varies significantly by country and region, so an absence here doesn't mean the species isn't present.