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Benefit-sharing from DSI rests on the provider country's national framework. Where it requires bilateral benefit-sharing for DSI, those terms apply. Where it gives effect to the CBD multilateral mechanism, users of its publicly available DSI should share benefits through it: all users non-monetary benefits, as appropriate, and commercial users above set size thresholds also monetary contributions to the Cali Fund. Where it is silent on DSI, the position is not yet settled: check with the country's competent national authority, through the ABS service. Any terms agreed when the genetic resources were accessed still apply. Access and benefit-sharing questions are handled by the ABS service, not by the DataBank. Learn more →
loggerhead turtle
taxon 8467Also known as: Testudo caretta
Not yet assessed
Occurrence records: Recorded mostly outside Africa. 4,124 of 229,718 GBIF records (2%) are from Africa (checked 10/9/2026). A hint from GBIF and the genomes on this Hub, not an assessment: GBIF includes zoo and travel records.
No closely related species are in the DataBank yet. See it in the species tree.
Origin: hub
62 downloads
First synced: 8/26/2026 · Last updated: 8/26/2026
Source: NCBI GCA_965117115.1 · View at source ↗
Download annotation (GFF3) · Download CDS (FASTA) · Download proteins (FASTA)
Collection: Cape Verde · Sex: female
Sequencing: OXFORD_NANOPORE · Flye · 23x coverage
Released: 2025-01-24 · Submitted by: Queen Mary University of London
publiccc0AFDSI-SEQ-267 Benefit-sharing under CBD Decision 16/2 and national frameworks →Country of origin: CV · PIC: unknown · MAT: unknown
GoaT: Chromosome assembly · 2.13 Gb · scaffold N50 130,956,235 · 28 chromosomes · View at source ↗
Publicly accessible — no request needed.
E1 — 561 aa
E2 — 405 aa
L1 — 494 aa
E7 — 111 aa
E4 — 146 aa
E6 — 85 aa
L2 — 452 aa
HBB — 146 aa
MB — 154 aa
protein 4281 — 167 aa
Origin: hub
0 downloads
First synced: 8/26/2026 · Last updated: 8/26/2026
Source: NCBI XM_048834053.2 · View at source ↗
Collection: USA: San Diego, California
Released: 2022-07-02
publiccc0AFDSI-SEQ-577 Benefit-sharing under CBD Decision 16/2 and national frameworks →Country of origin: US · PIC: unknown · MAT: unknown
Publicly accessible — no request needed.
AlphaFold DB proteome: UP000134884 ↗
PRIDE — project-level reference (metadata only; no per-protein identifications are available via PRIDE's public API)
KEGG: KEGG genome-based metabolic profile (ccay) (View at source ↗) — Genome-based pathway inference (KEGG) — reflects which metabolic pathways this species' annotated genes place it in, not experimentally measured metabolite presenceAFDSI-METABPROF-99
pLDDT confidence: 82.9
Auto-synced from AlphaFold DB AF-P0CAP0-F1 · View at source ↗
publiccc_byAFDSI-STRUCT-4819-V2pLDDT confidence: 96.5
Auto-synced from AlphaFold DB AF-P56208-F1 · View at source ↗
publiccc_byAFDSI-STRUCT-4816-V2pLDDT confidence: 84.0
Auto-synced from AlphaFold DB AF-0000000365786062 · View at source ↗
publiccc_byAFDSI-STRUCT-1354-V1pLDDT confidence: 48.8
Auto-synced from AlphaFold DB AF-0000000365786057 · View at source ↗
publiccc_byAFDSI-STRUCT-1356-V1pLDDT confidence: 65.2
Auto-synced from AlphaFold DB AF-0000000365786060 · View at source ↗
publiccc_byAFDSI-STRUCT-1358-V1camera_trap at South Africa · Source: GBIF 6131691496 (View at source ↗)AFDSI-IMG-1262
camera_trap at Mozambique · Source: GBIF 6398601471 (View at source ↗)AFDSI-IMG-1263
camera_trap at Mozambique · Source: GBIF 6398748199 (View at source ↗)AFDSI-IMG-1264
camera_trap at Mozambique · Source: GBIF 6398819655 (View at source ↗)AFDSI-IMG-1266
camera_trap at Mozambique · Source: GBIF 6399563772 (View at source ↗)AFDSI-IMG-1268
camera_trap at Mozambique · Source: GBIF 5938646315 (View at source ↗)AFDSI-IMG-1260
camera_trap at South Africa · Source: GBIF 6179101618 (View at source ↗)AFDSI-IMG-1261
camera_trap at Mozambique · Source: GBIF 6398601471 (View at source ↗)AFDSI-IMG-1265
camera_trap at Mozambique · Source: GBIF 6398819655 (View at source ↗)AFDSI-IMG-1267
camera_trap at Mozambique · Source: GBIF 6399613964 (View at source ↗)AFDSI-IMG-1269
4,129 real GBIF-recorded occurrences across Africa — see this species on GBIF ↗.
This reflects real occurrence records submitted to GBIF, not a comprehensive range map — sampling effort varies significantly by country and region, so an absence here doesn't mean the species isn't present.
A node's own derived bioinformatics-analysis output (e.g. an SSR/microsatellite discovery archive) run against this species' own genome data — see the Derived Analysis page for the full catalog.
MegaSSR — ssr_discovery
derived from genome record AFDSI-SEQ-267
File: GCA_965117115.1_megassr_results.tar.gz
Tool version: MegaSSR v3.0.0 (UM6P web pipeline)
Native — captured by Northern-MA-UM6P-8787752738 · View at source ↗
cc_by public Country of origin not recorded: see how benefit-sharing works →
AFDSI-ANALYSIS-21260