Bos taurus
domestic cattle
taxon 9913Also known as: Bos bovis, Bos primigenius taurus
Indigenous / local names
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Sequence records
genome (fasta)
mirroredOrigin: hub
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First synced: 8/26/2026 · Last updated: 8/26/2026
Source: NCBI GCA_054825135.1 · View at source ↗
publiccc0AFDSI-SEQ-398GoaT: Chromosome assembly · 2.77 Gb · scaffold N50 103,308,737 · 31 chromosomes · View at source ↗
Publicly accessible — no request needed.
transcriptome (fasta)
mirroredOrigin: hub
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First synced: 8/26/2026 · Last updated: 8/26/2026
Source: NCBI NM_001422550.1 · View at source ↗
publiccc0AFDSI-SEQ-567Publicly accessible — no request needed.
AlphaFold DB proteome: UP000009136 ↗
Proteomics (external sources)
PaxDb — real per-protein abundance
PAEP (9913.ENSBTAP00000062602) — abundance 78454AFDSI-PROTEOMICS-251
CSN1S1 (9913.ENSBTAP00000010119) — abundance 44649AFDSI-PROTEOMICS-252
ALB (9913.ENSBTAP00000022763) — abundance 42727AFDSI-PROTEOMICS-253
CSN2 (9913.ENSBTAP00000003409) — abundance 39438AFDSI-PROTEOMICS-254
LOC780933 (9913.ENSBTAP00000004737) — abundance 23645AFDSI-PROTEOMICS-255
PRSS1 (9913.ENSBTAP00000033392) — abundance 23645AFDSI-PROTEOMICS-256
HBB (9913.ENSBTAP00000050256) — abundance 18100AFDSI-PROTEOMICS-257
CSN3 (9913.ENSBTAP00000028685) — abundance 16244AFDSI-PROTEOMICS-258
HBA (9913.ENSBTAP00000037374) — abundance 16021AFDSI-PROTEOMICS-259
HBA1 (9913.ENSBTAP00000022034) — abundance 14318AFDSI-PROTEOMICS-260
PRIDE — project-level reference (metadata only; no per-protein identifications are available via PRIDE's public API)
N-Terminal Protein Sequencing by Nicotinic Acid Derivatization and MS Analysis (PXD081064) ↗AFDSI-PROJREF-116
Mini-Scale Cheese Peptidomics Reveals Strain-Specific Bitter Peptide Profiles During Cheese Aging (PXD079655) ↗AFDSI-PROJREF-119
A streamlined high-throughput metaproteomic workflow for functional analysis of the rumen microbiome (PXD078749) ↗AFDSI-PROJREF-120
Droplet microfluidic hydrogen/deuterium exchange for investigating protein dynamics with millisecond precision exchange (PXD077479) ↗AFDSI-PROJREF-121
Inflammation markers are associated with small extracellular vesicle protein signatures in cows with Mycoplasma bovisInflammation markers are associated with small extracellular vesicle protein signatures in cows with Mycoplasma bovis (PXD076220) ↗AFDSI-PROJREF-123
Development of an in vitro model of Mycoplasma bovis infection in static bioreactors for proteomic investigation of small extracellular vesicles for biomarker discovery (PXD076118) ↗AFDSI-PROJREF-124
DDA and DIA analysis of calf thymus histone modifications using Prop-PIC derivatization (PXD075498) ↗AFDSI-PROJREF-125
Chemical Profiles (external sources)
ChEMBL rows are compounds active against a protein target from this organism — not confirmed as compounds the species itself produces, unlike ANPDB's.
ChEMBL: CHEMBL305153 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; IC50 30.8 nMAFDSI-METABOLOMICS-227
ChEMBL: CHEMBL368457 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; IC50 24.6 nMAFDSI-METABOLOMICS-228
ChEMBL: CHEMBL1788270 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; IC50 20.1 nMAFDSI-METABOLOMICS-229
ChEMBL: ALPRENOLOL (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; IC50 2.98 nMAFDSI-METABOLOMICS-230
ChEMBL: BETAXOLOL (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; IC50 657.0 nMAFDSI-METABOLOMICS-231
ChEMBL: CHEMBL26917 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; IC50 17.6 nMAFDSI-METABOLOMICS-232
ChEMBL: ALBUTEROL (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; Kd 520.0 nMAFDSI-METABOLOMICS-233
ChEMBL: CHEMBL97927 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; IC50 75000.0 nMAFDSI-METABOLOMICS-234
ChEMBL: CHEMBL543416 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; IC50 540.0 nMAFDSI-METABOLOMICS-235
ChEMBL: CHEMBL95260 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; IC50 2200.0 nMAFDSI-METABOLOMICS-236
ChEMBL: CHEMBL95813 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; IC50 6000.0 nMAFDSI-METABOLOMICS-237
ChEMBL: CHEMBL330647 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; IC50 75000.0 nMAFDSI-METABOLOMICS-238
ChEMBL: CHEMBL122983 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; IC50 100000.0 nMAFDSI-METABOLOMICS-239
ChEMBL: CHEMBL318052 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; IC50 16000.0 nMAFDSI-METABOLOMICS-240
ChEMBL: CHEMBL319173 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; IC50 19000.0 nMAFDSI-METABOLOMICS-241
ChEMBL: CHEMBL2368616 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; IC50 4200.0 nMAFDSI-METABOLOMICS-242
ChEMBL: CHEMBL554013 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; IC50 31000.0 nMAFDSI-METABOLOMICS-243
ChEMBL: CHEMBL54526 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; Potency ratio 2.3AFDSI-METABOLOMICS-244
ChEMBL: CHEMBL298596 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; Potency ratio 1.4AFDSI-METABOLOMICS-245
ChEMBL: CHEMBL55556 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; Potency ratio 32.0AFDSI-METABOLOMICS-246
ChEMBL: BAFILOMYCIN A1 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; Potency ratio 1.0AFDSI-METABOLOMICS-247
ChEMBL: CHEMBL292443 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; Potency ratio 9.2AFDSI-METABOLOMICS-248
ChEMBL: CHEMBL299049 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; Potency ratio 1.4AFDSI-METABOLOMICS-249
ChEMBL: CHEMBL55299 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; Potency ratio 1.2AFDSI-METABOLOMICS-250
ChEMBL: CHEMBL301117 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; Potency ratio 280.0AFDSI-METABOLOMICS-251
ChEMBL: CHEMBL56572 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; Potency ratio 3.2AFDSI-METABOLOMICS-252
ChEMBL: CHEMBL58324 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; Potency ratio 9.1AFDSI-METABOLOMICS-253
ChEMBL: CHEMBL145741 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; Ki 74.13 nMAFDSI-METABOLOMICS-254
ChEMBL: CHEMBL145795 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; Ki 199.99 nMAFDSI-METABOLOMICS-255
ChEMBL: CHEMBL357211 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; Ki 279.9 nMAFDSI-METABOLOMICS-256
ChEMBL: CHEMBL435423 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; Ki 1199.5 nMAFDSI-METABOLOMICS-257
ChEMBL: CHEMBL1161260 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; Ki 2897.34 nMAFDSI-METABOLOMICS-258
ChEMBL: CHEMBL1161256 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; Ki 29991.63 nMAFDSI-METABOLOMICS-259
ChEMBL: CHEMBL142241 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; Ki 33.96 nMAFDSI-METABOLOMICS-260
ChEMBL: CHEMBL145517 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; Ki 151.36 nMAFDSI-METABOLOMICS-261
ChEMBL: CHEMBL1161253 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; Ki 260.02 nMAFDSI-METABOLOMICS-262
ChEMBL: CHEMBL358508 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; Ki 26977.39 nMAFDSI-METABOLOMICS-263
ChEMBL: OXAMATE (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; Ki 136000.0 nMAFDSI-METABOLOMICS-264
Metabolic Profiles (external sources)
MetaboLights: Oregano essential oil improves growth performance and health of steers by maintaining gut-liver axis homeostasis through the ileal microbiota-mediated bile acid pathway (View at source ↗)AFDSI-METABPROF-189
MetaboLights: Lactation-related metabolic mechanism investigated based on mammary gland metabolomics and 4 biofluids’ metabolomics relationships in dairy cows (View at source ↗)AFDSI-METABPROF-32
MetaboLights: The impact of rumen and hindgut microbiomes on the persistent productivity of dairy cows. (View at source ↗)AFDSI-METABPROF-33
MetaboLights: Prevotella vs. Ruminococcus enterotypes drive divergent milk fat synthesis in dairy cows through rumen microbiota-host metabolic crosstalk (View at source ↗)AFDSI-METABPROF-34
MetaboLights: Metabolome and proteome changes in skeletal muscle and blood of pre-weaning calves fed leucine and threonine supplemented diets (View at source ↗)AFDSI-METABPROF-35
MetaboLights: Oregano essential oil-driven rumen microbiome metabolism potentially regulates intramuscular fatty acid profile in Holstein bulls through liver lipid metabolism (View at source ↗)AFDSI-METABPROF-36
MetaboLights: Deciphering metabolomic alterations in seminal plasma of crossbred (Bos taurus X Bos indicus) bulls through comparative deep metabolomic analysis (View at source ↗)AFDSI-METABPROF-190
MetaboLights: Metabolic cooperation and spatiotemporal niche partitioning in a kefir microbial community; Interaction between the kefir isolates Lactococcus lactis and Acetobacter fabarum (GC-MS) (View at source ↗)AFDSI-METABPROF-171
MetaboLights: Untargeted metabolomic investigate milk and ruminal fluid of Holstein cows supplemented with Perilla frutescens leaf (View at source ↗)AFDSI-METABPROF-172
KEGG: KEGG genome-based metabolic profile (bta) (View at source ↗) — Genome-based pathway inference (KEGG) — reflects which metabolic pathways this species' annotated genes place it in, not experimentally measured metabolite presenceAFDSI-METABPROF-97
Cellular & Molecular Imaging (external sources)
BioImage Archive: In support of: In the murine and bovine maternal mammary gland signal transducer and activator of transcription 3 is activated in clusters of epithelial cells around the day of birth (View on source archive ↗)AFDSI-CELL-147
BioImage Archive: Correlative three-dimensional X-ray histology (3D-XRH) as a tool for quantifying mammalian placental structure (View on source archive ↗)AFDSI-CELL-148
BioImage Archive: Confocal imaging data for "Volumetric morphometry reveals mitotic spindle width as the best predictor of spindle scaling" (View on source archive ↗)AFDSI-CELL-149
BioImage Archive: CAR19 Tregs treat murine chronic Graft-Versus-Host Disease through immune suppression without measurable B-cell cytolysis (View on source archive ↗)AFDSI-CELL-150
BioImage Archive: The effect of image acquisition settings and image processing on fluorescence microscopy data and downstream analysis (View on source archive ↗)AFDSI-CELL-151
Geographic range (Africa)
4,519 real GBIF-recorded occurrences across Africa — see this species on GBIF ↗.
This reflects real occurrence records submitted to GBIF, not a comprehensive range map — sampling effort varies significantly by country and region, so an absence here doesn't mean the species isn't present.