Culex quinquefasciatus

southern house mosquito

taxon 7176

Also known as: Culex (Culex) quinquefasciatus, Culex fatigans, Culex pipiens fatigans, Culex pipiens quinquefasciatus

Indigenous / local names

No local or indigenous names recorded yet.

Genome browser

Sequence records

genome (fasta)

mirrored

Origin: hub

4 downloads

First synced: 9/1/2026 · Last updated: 9/1/2026

Source: NCBI GCA_015732745.1 · View at source ↗

Collection: · Sex: male

Sequencing: Oxford Nanopore MinION; Oxford Nanopore PromethION; Illumina; Bionano DLS; Hi-C · canu v. 1.8 · 76x coverage

publiccc0AFDSI-SEQ-907

GoaT: Scaffold assembly · 0.21 Gb · scaffold N50 9,131,884 · View at source ↗

Publicly accessible — no request needed.

genome (fasta)

mirrored

Origin: hub

1 download

First synced: 9/1/2026 · Last updated: 9/1/2026

Source: NCBI GCA_015732765.1 · View at source ↗

Collection: · Sex: male

Sequencing: Oxford Nanopore MinION; Oxford Nanopore PromethION; Illumina; Bionano DLS; Hi-C; Oxford Nanopore Flongle · canu v. 1.8 · 76x coverage

publiccc0AFDSI-SEQ-908

GoaT: Scaffold assembly · 0.21 Gb · scaffold N50 9,131,884 · View at source ↗

Publicly accessible — no request needed.

genome (fasta)

mirrored

Origin: hub

53 downloads

First synced: 9/1/2026 · Last updated: 9/1/2026

Source: NCBI GCF_015732765.1 · View at source ↗

Download annotation (GFF3) · Download CDS (FASTA) · Download proteins (FASTA)

Collection: · Sex: male

Sequencing: Oxford Nanopore MinION; Oxford Nanopore PromethION; Illumina; Bionano DLS; Hi-C; Oxford Nanopore Flongle · canu v. 1.8 · 76x coverage

publiccc0AFDSI-SEQ-909

GoaT: Scaffold assembly · 0.21 Gb · scaffold N50 9,131,884 · View at source ↗

Publicly accessible — no request needed.

transcriptome (fasta)

mirrored

Origin: hub

0 downloads

First synced: 9/2/2026 · Last updated: 9/2/2026

Source: NCBI PV126494.1 · View at source ↗

Released: 2025-03-12

publiccc0AFDSI-SEQ-961

Publicly accessible — no request needed.

No AlphaFold DB proteome found for this species.

Proteomics (external sources)

PRIDE — project-level reference (metadata only; no per-protein identifications are available via PRIDE's public API)

Proteomics Informed by Transcriptomics for Characterising Active Transposable Elements and Genome Annotation in Aedes aegypti (PXD003799) ↗AFDSI-PROJREF-377

Chemical Profiles (external sources)

ChEMBL rows are compounds active against a protein target from this organism — not confirmed as compounds the species itself produces, unlike ANPDB's.

ChEMBL: CHEMBL518310 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; LC50 0.012 ppmAFDSI-METABOLOMICS-934

ChEMBL: PERMETHRIN (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; LC50 0.005 ppmAFDSI-METABOLOMICS-936

ChEMBL: CHEMBL1257408 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; LC50 1.02 ug.mL-1AFDSI-METABOLOMICS-938

ChEMBL: CHEMBL1257409 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; LC50 0.85 ug.mL-1AFDSI-METABOLOMICS-939

ChEMBL: CHEMBL518310 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; LC50 0.012 ppmAFDSI-METABOLOMICS-933

ChEMBL: PERMETHRIN (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; LC50 0.005 ppmAFDSI-METABOLOMICS-935

ChEMBL: CHEMBL1257408 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; LC50 1.02 ug.mL-1AFDSI-METABOLOMICS-937

ChEMBL: CHEMBL1257409 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; LC50 0.85 ug.mL-1AFDSI-METABOLOMICS-940

ChEMBL: CHEMBL1257521 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; LC50 2.09 ug.mL-1AFDSI-METABOLOMICS-942

ChEMBL: CHEMBL1257521 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; LC50 2.09 ug.mL-1AFDSI-METABOLOMICS-941

ChEMBL: CHEMBL1257522 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; LC50 0.88 ug.mL-1AFDSI-METABOLOMICS-943

ChEMBL: CHEMBL1257638 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; LC50 2.27 ug.mL-1AFDSI-METABOLOMICS-945

ChEMBL: CHEMBL1257639 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; LC50 1.01 ug.mL-1AFDSI-METABOLOMICS-947

ChEMBL: CHEMBL1257522 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; LC50 0.88 ug.mL-1AFDSI-METABOLOMICS-944

ChEMBL: CHEMBL1257638 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; LC50 2.27 ug.mL-1AFDSI-METABOLOMICS-946

ChEMBL: CHEMBL1257639 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; LC50 1.01 ug.mL-1AFDSI-METABOLOMICS-948

Metabolic Profiles (external sources)

KEGG: KEGG genome-based metabolic profile (cqu) (View at source ↗) — Genome-based pathway inference (KEGG) — reflects which metabolic pathways this species' annotated genes place it in, not experimentally measured metabolite presenceAFDSI-METABPROF-154

Cellular & Molecular Imaging (external sources)

BioImage Archive: Comprehensive Dipteran Wing Image Repository for Advancing Research on Geometric Morphometric- and AI-Based Identification (View on source archive ↗)AFDSI-CELL-857

BioImage Archive: Darwin Tree of Life - NHM samples image catalogue (View on source archive ↗)AFDSI-CELL-858

BioImage Archive: (View on source archive ↗)AFDSI-CELL-859

Geographic range (Africa)

527 real GBIF-recorded occurrences across Africa — see this species on GBIF ↗.

This reflects real occurrence records submitted to GBIF, not a comprehensive range map — sampling effort varies significantly by country and region, so an absence here doesn't mean the species isn't present.