Plasmodium vivax

malaria parasite P. vivax

taxon 5855

Also known as: Haemamoeba vivax

Indigenous / local names

No local or indigenous names recorded yet.

Genome browser

Sequence records

genome (fasta)

mirrored

Origin: hub

1 download

First synced: 8/26/2026 · Last updated: 8/26/2026

Source: NCBI GCA_040114635.1 · View at source ↗

Collection: · Sex: not applicable

Sequencing: Oxford Nanopore GridION; Illumina · Canu v. 2.2 · 14x coverage

publiccc0AFDSI-SEQ-229

GoaT: Chromosome assembly · 0.03 Gb · scaffold N50 1,525,894 · 14 chromosomes · View at source ↗

Publicly accessible — no request needed.

transcriptome (fasta)

mirrored

Origin: hub

0 downloads

First synced: 8/26/2026 · Last updated: 8/26/2026

Source: NCBI PV069481.1 · View at source ↗

publiccc0AFDSI-SEQ-654

Publicly accessible — no request needed.

genome (fasta)

mirrored

Origin: hub

1 download

First synced: 9/1/2026 · Last updated: 9/1/2026

Source: NCBI GCA_003402195.1 · View at source ↗

Sequencing: Illumina MiSeq and PacBio · Geneious v. 9; BEDtools v. 2.18; SPAdes v. 3.9.0; smalt v. 0.7.6; SAMtools v. 1.3.1; igvtools v. 2.3.72; IMAGE v. 2.4; proovread v. 2.13.13; FGAP v. 1.8.1; Gapfiller v. 1.10; BLASR v. 5.3.8; ABACAS v. 1.3.2; iCORN v. 2 · 320x coverage

publiccc0AFDSI-SEQ-794

GoaT: Chromosome assembly · 0.03 Gb · scaffold N50 1,525,894 · 14 chromosomes · View at source ↗

Publicly accessible — no request needed.

genome (fasta)

mirrored

Origin: hub

1 download

First synced: 9/1/2026 · Last updated: 9/1/2026

Source: NCBI GCA_003402215.1 · View at source ↗

publiccc0AFDSI-SEQ-795

GoaT: Chromosome assembly · 0.03 Gb · scaffold N50 1,525,894 · 14 chromosomes · View at source ↗

Publicly accessible — no request needed.

No AlphaFold DB proteome found for this species.

Proteomics (external sources)

PRIDE — project-level reference (metadata only; no per-protein identifications are available via PRIDE's public API)

Immmunopeptidomics data from reticulocytes of Plasmodium vivax infected human donors (PXD077321) ↗AFDSI-PROJREF-271

Invasion preferences suggest a possible role for Plasmodium falciparum parasites in the expansion of Duffy negativity in West and Central Africa (PXD065766) ↗AFDSI-PROJREF-272

On-target, dual aminopeptidase inhibition provides cross-species antimalarial activity (PXD046006) ↗AFDSI-PROJREF-273

Chemoproteomics validates selective targeting of Plasmodium M1 alanyl aminopeptidase as a cross-species strategy to treat malaria (PXD044125) ↗AFDSI-PROJREF-274

Mass spectrometry identification of biomarkers in extracellular vesicles from Plasmodium vivax liver hypnozoite infections (PXD035719) ↗AFDSI-PROJREF-275

Antigen discovery in circulating extracellular vesicles from Plasmodium vivax patients (PXD029439) ↗AFDSI-PROJREF-276

Plasma-derived extracellular vesicles from Plasmodium vivax patients signal spleen fibroblasts via NF-kB facilitating parasite cytoadherence (PXD018337) ↗AFDSI-PROJREF-277

Next-generation diagnostic biomarkers for vivax malaria (PXD015165) ↗AFDSI-PROJREF-278

Proteomic characterization of plasma-derived exosomes from P. vivax infected FRG huHep mice (PXD008945) ↗AFDSI-PROJREF-279

Investigation of Plasmodium vivax trophozoite-schizont transition proteome (PXD005769) ↗AFDSI-PROJREF-280

Chemical Profiles (external sources)

ChEMBL rows are compounds active against a protein target from this organism — not confirmed as compounds the species itself produces, unlike ANPDB's.

ChEMBL: CHLOROQUINE (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; IC50 5.5 nMAFDSI-METABOLOMICS-720

ChEMBL: CHEMBL1669 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; IC50 0.05 ug.mL-1AFDSI-METABOLOMICS-721

ChEMBL: PYRIMETHAMINE (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; IC50 0.008 ug.mL-1AFDSI-METABOLOMICS-722

ChEMBL: PAFURAMIDINE (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; Activity 80.0 %AFDSI-METABOLOMICS-723

ChEMBL: CHEMBL1173057 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; Activity 47.0 %AFDSI-METABOLOMICS-724

ChEMBL: CHEMBL1170048 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; Activity 39.0 %AFDSI-METABOLOMICS-725

ChEMBL: CIPARGAMIN (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; Inhibition %AFDSI-METABOLOMICS-726

ChEMBL: CHEMBL575149 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; Ki 370.0 nMAFDSI-METABOLOMICS-727

ChEMBL: CHEMBL583993 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; Ki 2200.0 nMAFDSI-METABOLOMICS-728

ChEMBL: CHEMBL575115 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; Ki 160.0 nMAFDSI-METABOLOMICS-729

ChEMBL: CHEMBL584189 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; Ki 190.0 nMAFDSI-METABOLOMICS-730

ChEMBL: CHEMBL575150 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; Ki 390.0 nMAFDSI-METABOLOMICS-731

ChEMBL: CHEMBL584190 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; Ki 340.0 nMAFDSI-METABOLOMICS-732

ChEMBL: CHEMBL584191 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; Ki 160.0 nMAFDSI-METABOLOMICS-733

ChEMBL: CHEMBL584192 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; Ki 120.0 nMAFDSI-METABOLOMICS-734

ChEMBL: CHEMBL584193 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; Ki 2200.0 nMAFDSI-METABOLOMICS-735

ChEMBL: CHEMBL3344163 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; Inhibition 35.0 %AFDSI-METABOLOMICS-736

ChEMBL: CHEMBL3344272 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; IC50 24.0 nMAFDSI-METABOLOMICS-737

ChEMBL: CHEMBL3782104 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; IC50 0.2 nMAFDSI-METABOLOMICS-738

ChEMBL: CHEMBL5270166 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; IC50 94.0 nMAFDSI-METABOLOMICS-739

Metabolic Profiles (external sources)

MetaboLights: MaHPIC Experiment HuC - Metabolomics of plasma samples from human volunteers infected with Plasmodium vivax (View at source ↗)AFDSI-METABPROF-75

MetaboLights: MaHPIC Experiment HuB - Metabolomics analysis of human plasma from patients infected with Plasmodium falciparum and P.vivax for discovery of diagnostic markers of malaria (View at source ↗)AFDSI-METABPROF-76

KEGG: KEGG genome-based metabolic profile (pvx) (View at source ↗) — Genome-based pathway inference (KEGG) — reflects which metabolic pathways this species' annotated genes place it in, not experimentally measured metabolite presenceAFDSI-METABPROF-123

Cellular & Molecular Imaging (external sources)

BioImage Archive: Rhoptry biogenesis in Plasmodium sporozoites is uncoupled from mitosis and forms distinct pairs (View on source archive ↗)AFDSI-CELL-622

BioImage Archive: Actomyosin forces and the energetics of red blood cell invasion by the malaria parasite Plasmodium falciparum (View on source archive ↗)AFDSI-CELL-623

BioImage Archive: tRNA lysidinylation is essential for the minimal translation system found in the apicoplast of Plasmodium falciparum (View on source archive ↗)AFDSI-CELL-624

BioImage Archive: Striated fiber assemblins in Plasmodium berghei (View on source archive ↗)AFDSI-CELL-625

BioImage Archive: Plasmodium falciparum impairs Ang-1 secretion by pericytes in a 3D brain microvessel model (View on source archive ↗)AFDSI-CELL-626

BioImage Archive: Machine Learning-based Phenotypic Imaging to Characterise the Targetable Biology of Plasmodium falciparum Male Gametocytes for Transmission-Blocking Antimalarials (View on source archive ↗)AFDSI-CELL-627

BioImage Archive: Striated fiber assemblins and associated proteins in Plasmodium falciparum (View on source archive ↗)AFDSI-CELL-628

BioImage Archive: A machine learning approach to define antimalarial drug action from heterogeneous cell-based screens (OME-NGFF) (View on source archive ↗)AFDSI-CELL-629

BioImage Archive: The CCCH-type zinc-finger PfMD3 promotes translation for malaria parasite transmission (View on source archive ↗)AFDSI-CELL-630

BioImage Archive: Automated confocal feedback imaging of Plasmodium berghei liver stage translation (View on source archive ↗)AFDSI-CELL-631