Ceratitis capitata

Mediterranean fruit fly

taxon 7213

Indigenous / local names

No local or indigenous names recorded yet.

Genome browser

Sequence records

genome (fasta)

mirrored

Origin: hub

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First synced: 8/26/2026 · Last updated: 8/26/2026

Source: NCBI GCA_043005455.1 · View at source ↗

Sequencing: PacBio CCS; Hi-C sequencing · Hifiasm v. 0.15.4-r347; HiRise scaffolding · 78x coverage

publiccc0AFDSI-SEQ-239

GoaT: Scaffold assembly · 0.70 Gb · scaffold N50 91,678,140 · View at source ↗

Publicly accessible — no request needed.

transcriptome (fasta)

mirrored

Origin: hub

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First synced: 8/26/2026 · Last updated: 8/26/2026

Source: NCBI NM_001279375.1 · View at source ↗

publiccc0AFDSI-SEQ-579

Publicly accessible — no request needed.

AlphaFold DB proteome: UP000163741 ↗

Chemical Profiles (external sources)

ChEMBL rows are compounds active against a protein target from this organism — not confirmed as compounds the species itself produces, unlike ANPDB's.

ChEMBL: (-)-BOTRYODIPLODIN (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; LD50 12.9 ugAFDSI-METABOLOMICS-596

ChEMBL: PENITREM G (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; Activity 3.8 %AFDSI-METABOLOMICS-597

ChEMBL: PENITREM F (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; Activity 100.0 %AFDSI-METABOLOMICS-598

ChEMBL: PENITREM D (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; Activity 52.5 %AFDSI-METABOLOMICS-599

ChEMBL: PENITREM C (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; Activity 100.0 %AFDSI-METABOLOMICS-600

ChEMBL: PENITREM B (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; Activity 100.0 %AFDSI-METABOLOMICS-601

ChEMBL: PENITREM A (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; Activity 100.0 %AFDSI-METABOLOMICS-602

Metabolic Profiles (external sources)

KEGG: KEGG genome-based metabolic profile (ccat) (View at source ↗) — Genome-based pathway inference (KEGG) — reflects which metabolic pathways this species' annotated genes place it in, not experimentally measured metabolite presenceAFDSI-METABPROF-100

Cellular & Molecular Imaging (external sources)

BioImage Archive: Darwin Tree of Life - NHM samples image catalogue (View on source archive ↗)AFDSI-CELL-191

BioImage Archive: The European Reference Genome Atlas - COPO submission (View on source archive ↗)AFDSI-CELL-192

Geographic range (Africa)

2,388 real GBIF-recorded occurrences across Africa — see this species on GBIF ↗.

This reflects real occurrence records submitted to GBIF, not a comprehensive range map — sampling effort varies significantly by country and region, so an absence here doesn't mean the species isn't present.