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Gallus gallus

chicken

taxon 9031

Also known as: Gallus gallus domesticus, Phasianus gallus

Indigenous / local names

Genome browser

Sequence records

genome (fasta)

mirrored

Origin: hub

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First synced: 8/26/2026 · Last updated: 8/26/2026

Source: NCBI GCA_055689475.1 · View at source ↗

publiccc0AFDSI-SEQ-407

GoaT: Chromosome assembly · 1.05 Gb · scaffold N50 90,861,225 · 41 chromosomes · View at source ↗

Publicly accessible — no request needed.

transcriptome (fasta)

mirrored

Origin: hub

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First synced: 8/26/2026 · Last updated: 8/26/2026

Source: NCBI NM_001006488.2 · View at source ↗

publiccc0AFDSI-SEQ-610

Publicly accessible — no request needed.

No AlphaFold DB proteome found for this species.

Proteomics (external sources)

PaxDb — real per-protein abundance

HBA1 (9031.ENSGALP00000050043) — abundance 21189AFDSI-PROTEOMICS-351

OVAL (9031.ENSGALP00000036403) — abundance 20858AFDSI-PROTEOMICS-352

TMSB4X (9031.ENSGALP00000040654) — abundance 17363AFDSI-PROTEOMICS-353

ALB (9031.ENSGALP00000044604) — abundance 15597AFDSI-PROTEOMICS-354

TF (9031.ENSGALP00000010405) — abundance 13773AFDSI-PROTEOMICS-355

RPL39L (9031.ENSGALP00000038282) — abundance 11271AFDSI-PROTEOMICS-356

LYZ (9031.ENSGALP00000016177) — abundance 9287AFDSI-PROTEOMICS-357

APOV1 (9031.ENSGALP00000024373) — abundance 8859AFDSI-PROTEOMICS-358

GAPDH (9031.ENSGALP00000063325) — abundance 8850AFDSI-PROTEOMICS-359

APOA1 (9031.ENSGALP00000011510) — abundance 8344AFDSI-PROTEOMICS-360

PRIDE — project-level reference (metadata only; no per-protein identifications are available via PRIDE's public API)

Multi-Omics profiling reveals immunometabolic adaptations underlying disease resilience in indigenous Lueyang Silky Fowl compared to White Leghorns (PXD077559) ↗AFDSI-PROJREF-172

Proton Transfer Charge Reduction Enables Isobaric Labeling-Based Proteoform Quantification of Overlapping Signals in Top-Down Mass Spectrometry (PXD074730) ↗AFDSI-PROJREF-173

Proteomic remodeling of the chicken spleen during chicken astrovirus infection reveals coordinated interferon activation and stromal restructuring (PXD074601) ↗AFDSI-PROJREF-174

Functional enrichment analysis of differentially expressed proteins (PXD072038) ↗AFDSI-PROJREF-175

Proteomic of YsEVs from Unfertile and Fertilized Chicken Chicken YsEVs (PXD069777) ↗AFDSI-PROJREF-176

Meat quality changes as measured by proteomic responses in chicken muscle after a diet with or without fibre and with or without space restrictions. (PXD069586) ↗AFDSI-PROJREF-177

Integrative multi-omics analysis of dietary fibre-induced modulations in the composition and function of chicken caecal microbiota (PXD068444) ↗AFDSI-PROJREF-178

Identification and characterization of the zebra finch (Taeniopygia guttata) sperm proteome (PXD067397) ↗AFDSI-PROJREF-179

Identification of RNA-binding protein interactors of duck lncrna (lnc455) using Multiple Oligo-assisted RNA Pulldown with Hybridization followed by Mass Spectrometry (MORPH-MS) (PXD067094) ↗AFDSI-PROJREF-180

GeLC-MS/MS analysis of hen egg vitelline membrane from freshly-laid eggs and eggs stored for 28 days at 4°C and 20°C (PXD066675) ↗AFDSI-PROJREF-181

Chemical Profiles (external sources)

ChEMBL rows are compounds active against a protein target from this organism — not confirmed as compounds the species itself produces, unlike ANPDB's.

ChEMBL: METHOTREXATE (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; I / E100 1.0AFDSI-METABOLOMICS-324

ChEMBL: CHEMBL273834 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; I / E100 3.5AFDSI-METABOLOMICS-325

ChEMBL: CHEMBL418165 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; I / E100 1.4AFDSI-METABOLOMICS-326

ChEMBL: TRIMETHOPRIM (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; IC50 750000.0 nMAFDSI-METABOLOMICS-327

ChEMBL: CHEMBL320596 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; IC50 350000.0 nMAFDSI-METABOLOMICS-328

ChEMBL: CHEMBL418347 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; IC50 22000.0 nMAFDSI-METABOLOMICS-329

ChEMBL: CHEMBL57582 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; Log 1/C 5.25AFDSI-METABOLOMICS-330

ChEMBL: CHEMBL18912 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; Log 1/C 4.34AFDSI-METABOLOMICS-331

ChEMBL: DIAVERIDINE (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; Log 1/C 4.46AFDSI-METABOLOMICS-332

ChEMBL: CHEMBL279273 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; Log 1/C 3.59AFDSI-METABOLOMICS-333

ChEMBL: ISOTRETINOIN (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; IC50 900.0 nMAFDSI-METABOLOMICS-334

ChEMBL: CHEMBL333032 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; IC50 470.0 nMAFDSI-METABOLOMICS-335

ChEMBL: CHEMBL2111790 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; IC50 500000.0 nMAFDSI-METABOLOMICS-336

ChEMBL: TRETINOIN (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; IC50 370.0 nMAFDSI-METABOLOMICS-337

ChEMBL: CHEMBL2111792 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; Inhibition 10.0 %AFDSI-METABOLOMICS-338

ChEMBL: CHEMBL114929 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; Ki 40.0 nMAFDSI-METABOLOMICS-339

ChEMBL: CHEMBL53015 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; Ki 161.0 nMAFDSI-METABOLOMICS-340

ChEMBL: MELATONIN (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; Ki 0.7 nMAFDSI-METABOLOMICS-341

ChEMBL: CHEMBL113243 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; Ki 7.6 nMAFDSI-METABOLOMICS-342

ChEMBL: CHEMBL111866 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; Ki 0.45 nMAFDSI-METABOLOMICS-343

ChEMBL: CHEMBL113067 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; Ki 4.0 nMAFDSI-METABOLOMICS-344

ChEMBL: CHEMBL419939 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; Ki 224.0 nMAFDSI-METABOLOMICS-345

ChEMBL: CHEMBL113859 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; Ki 0.53 nMAFDSI-METABOLOMICS-346

ChEMBL: CHEMBL111880 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; Ki 29.0 nMAFDSI-METABOLOMICS-347

ChEMBL: CHEMBL113244 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; Ki 3.0 nMAFDSI-METABOLOMICS-348

ChEMBL: CHEMBL607777 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; IC50 10.3 nMAFDSI-METABOLOMICS-349

ChEMBL: N6-PHENYLADENOSINE (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; IC50 4.6 nMAFDSI-METABOLOMICS-350

ChEMBL: CHEMBL1093910 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; IC50 6.4 nMAFDSI-METABOLOMICS-351

ChEMBL: CHEMBL610427 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; IC50 13.1 nMAFDSI-METABOLOMICS-352

ChEMBL: CHEMBL45891 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; IC50 2.5 nMAFDSI-METABOLOMICS-353

ChEMBL: CHEMBL609650 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; IC50 11.1 nMAFDSI-METABOLOMICS-354

ChEMBL: CHEMBL608217 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; IC50 42.1 nMAFDSI-METABOLOMICS-355

ChEMBL: CHEMBL607666 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; IC50 25.3 nMAFDSI-METABOLOMICS-356

ChEMBL: CHEMBL609086 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; IC50 45.1 nMAFDSI-METABOLOMICS-357

ChEMBL: CHEMBL607951 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; IC50 19.0 nMAFDSI-METABOLOMICS-358

ChEMBL: CHEMBL301620 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; IC50 5800.0 nMAFDSI-METABOLOMICS-359

ChEMBL: CHEMBL59384 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; IC50 82.0 nMAFDSI-METABOLOMICS-360

ChEMBL: CHEMBL299248 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; IC50 nMAFDSI-METABOLOMICS-361

ChEMBL: CHEMBL61753 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; IC50 10000.0 nMAFDSI-METABOLOMICS-362

ChEMBL: CHEMBL59004 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; IC50 1100.0 nMAFDSI-METABOLOMICS-363

ChEMBL: CHEMBL59054 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; IC50 11000.0 nMAFDSI-METABOLOMICS-364

ChEMBL: CHEMBL294684 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; IC50 nMAFDSI-METABOLOMICS-365

ChEMBL: STAUROSPORINE (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; IC50 10.0 nMAFDSI-METABOLOMICS-366

ChEMBL: CHEMBL59009 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; IC50 1800.0 nMAFDSI-METABOLOMICS-367

ChEMBL: CHEMBL58458 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; IC50 1600.0 nMAFDSI-METABOLOMICS-368

Metabolic Profiles (external sources)

MetaboLights: Microbiomics combined metabolomics reveals Akkermansia modulating chicken gut microenvironment to protect from gamma coronavirus infection (View at source ↗)AFDSI-METABPROF-47

MetaboLights: Relationships between digestive efficiency and metabolomic profiles of serum and intestinal contents in chickens (View at source ↗)AFDSI-METABPROF-48

MetaboLights: In Vitro and In Vivo Metabolomic Profiling after Infection with Virulent Newcastle Disease Virus (View at source ↗)AFDSI-METABPROF-49

MetaboLights: Holo omic investigation of host and microbe in broiler chicken (HoloFood Trial 1/2/3) (View at source ↗)AFDSI-METABPROF-50

MetaboLights: Multi-Omics profiling reveals immunometabolic adaptations underlying disease resilience in indigenous Lueyang Silky Fowl compared to White Leghorns (View at source ↗)AFDSI-METABPROF-51

KEGG: KEGG genome-based metabolic profile (gga) (View at source ↗) — Genome-based pathway inference (KEGG) — reflects which metabolic pathways this species' annotated genes place it in, not experimentally measured metabolite presenceAFDSI-METABPROF-108

MetaboLights: Metabolomics reveals stage-specific internal quality deterioration and distinct metabolic changes in egg albumen and yolk during storage (View at source ↗)AFDSI-METABPROF-179

Cellular & Molecular Imaging (external sources)

IDR: The mesoSPIM initiative – open-source light-sheet microscopes for imaging cleared tissue (View on source archive ↗)AFDSI-CELL-32

BioImage Archive: Time-Lapse Imaging of Early Chick Embryo Development ex ovo (View on source archive ↗)AFDSI-CELL-403

BioImage Archive: Development of a shortwave infrared (SWIR) sinuscope for the detection of cerebrospinal fluid (CSF) leaks. (View on source archive ↗)AFDSI-CELL-404

BioImage Archive: Source Data for "A low-level Cdkn1c/p57kip2 expression in spinal progenitors drives the transition from proliferative to neurogenic modes of division" - Mida et al. (View on source archive ↗)AFDSI-CELL-405

BioImage Archive: A 3D molecular atlas of the chick embryonic heart (View on source archive ↗)AFDSI-CELL-406

BioImage Archive: (View on source archive ↗)AFDSI-CELL-407

Geographic range (Africa)

1,194 real GBIF-recorded occurrences across Africa — see this species on GBIF ↗.

This reflects real occurrence records submitted to GBIF, not a comprehensive range map — sampling effort varies significantly by country and region, so an absence here doesn't mean the species isn't present.