Mus musculus
house mouse
taxon 10090Indigenous / local names
- Huismuis (af) Wikidata ↗
- ụlọ òké (ig) Wikidata ↗
- Dooli (so) Wikidata ↗
- Dooli (som) GBIF ↗
- Eku (yo) Wikidata ↗
Genome browser
Sequence records
genome (fasta)
mitochondrion genomemirroredOrigin: hub
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First synced: 8/31/2026 · Last updated: 8/31/2026
Source: NCBI NC_005089.1 · View at source ↗
publiccc0AFDSI-SEQ-699GoaT: Chromosome assembly · 2.73 Gb · scaffold N50 106,145,001 · 21 chromosomes · View at source ↗
Raw reads cross-referenced (SRA):
- SRR36128506 (Illumina HiSeq 2000) · View at source ↗ AFDSI-SRAREF-1
- SRR36128507 (Illumina HiSeq 2000) · View at source ↗ AFDSI-SRAREF-2
- SRR36128508 (Illumina HiSeq 2000) · View at source ↗ AFDSI-SRAREF-3
- SRR36128509 (Illumina HiSeq 2000) · View at source ↗ AFDSI-SRAREF-4
- SRR36128510 (Illumina HiSeq 2000) · View at source ↗ AFDSI-SRAREF-5
- SRR36128511 (Illumina HiSeq 2000) · View at source ↗ AFDSI-SRAREF-6
- SRR36128512 (Illumina HiSeq 2000) · View at source ↗ AFDSI-SRAREF-7
- SRR36128513 (Illumina HiSeq 2000) · View at source ↗ AFDSI-SRAREF-8
- SRR36128514 (Illumina HiSeq 2000) · View at source ↗ AFDSI-SRAREF-9
- SRR36128515 (Illumina HiSeq 2000) · View at source ↗ AFDSI-SRAREF-10
Publicly accessible — no request needed.
transcriptome (fasta)
mirroredOrigin: hub
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First synced: 9/2/2026 · Last updated: 9/2/2026
Source: NCBI NM_001361996.1 · View at source ↗
Released: 2018-03-31
publiccc0AFDSI-SEQ-987Publicly accessible — no request needed.
AlphaFold DB proteome: UP000000589 ↗
Proteomics (external sources)
PaxDb — real per-protein abundance
Tmsb4x (10090.ENSMUSP00000107795) — abundance 18520AFDSI-PROTEOMICS-601
Hba-a2 (10090.ENSMUSP00000090895) — abundance 15648AFDSI-PROTEOMICS-602
Hba-a1 (10090.ENSMUSP00000090897) — abundance 15648AFDSI-PROTEOMICS-603
Hbb-bs (10090.ENSMUSP00000023934) — abundance 13476AFDSI-PROTEOMICS-604
Hbb-bt (10090.ENSMUSP00000095794) — abundance 13476AFDSI-PROTEOMICS-605
Tubb5 (10090.ENSMUSP00000001566) — abundance 12796AFDSI-PROTEOMICS-606
Ptma (10090.ENSMUSP00000044188) — abundance 8312AFDSI-PROTEOMICS-607
Eef1a1 (10090.ENSMUSP00000042457) — abundance 6102AFDSI-PROTEOMICS-608
Actg1 (10090.ENSMUSP00000071486) — abundance 5512AFDSI-PROTEOMICS-609
Actb (10090.ENSMUSP00000098066) — abundance 5489AFDSI-PROTEOMICS-610
PRIDE — project-level reference (metadata only; no per-protein identifications are available via PRIDE's public API)
Motile Vesicles or MoVes are a migration-associated extracellular vesicle population carrying genomic DNA (PXD083320) ↗AFDSI-PROJREF-414
GDF15 Resolves Liver Inflammation in MASH Independently of Reductions in Food Intake or Weight Loss (PXD083028) ↗AFDSI-PROJREF-415
Single-oocyte DIA proteomic profiling during follicular development in mice (PXD082998) ↗AFDSI-PROJREF-416
Activity-based profiling of primary brain cells identifies covalent allosteric modulators of HCN channels (PXD082934) ↗AFDSI-PROJREF-417
Proteomic and phosphoproteomic analysis of mouse nerves and neuromas by TMT and mass spectrometry. (PXD082960) ↗AFDSI-PROJREF-418
A lifespan multi-tissue atlas of non-canonical peptides reveals organ- and life-stage-specific proteomic remodeling in mice (PXD082651) ↗AFDSI-PROJREF-419
Multi-region proteomics of synaptosomes and cytosolic fractions of Chrdl1 KO and WT mouse brains (PXD082639) ↗AFDSI-PROJREF-420
Engineering Palmitoylated G-Quadruplex Aptamers to Target STAT3 and Overcome Therapeutic Resistance in Pancreatic Cancer (PXD082487) ↗AFDSI-PROJREF-421
Nucleosides and Oligonucleotides analysis using LC-MS/MS in mouse liver (PXD082484) ↗AFDSI-PROJREF-422
Mapping of ATR–ATRIP phosphorylation sites before and after autophosphorylation (PXD082486) ↗AFDSI-PROJREF-423
Chemical Profiles (external sources)
ChEMBL rows are compounds active against a protein target from this organism — not confirmed as compounds the species itself produces, unlike ANPDB's.
ChEMBL: BOSUTINIB (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; Inhibition 20.0 %AFDSI-METABOLOMICS-754
ChEMBL: CHEMBL4847656 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; FC 3.968AFDSI-METABOLOMICS-755
ChEMBL: SILMITASERTIB (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; FC 2.605AFDSI-METABOLOMICS-756
ChEMBL: CHEMBL6167833 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; ActivityAFDSI-METABOLOMICS-757
ChEMBL: CHEMBL55305 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; Ratio 0.77AFDSI-METABOLOMICS-758
ChEMBL: CHEMBL323757 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; ED50 22.4 umol.kg-1AFDSI-METABOLOMICS-759
ChEMBL: CHEMBL446399 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; Ratio 0.64AFDSI-METABOLOMICS-760
ChEMBL: NALTREXONE (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; AD50 0.06 mg kg-1AFDSI-METABOLOMICS-761
ChEMBL: CHEMBL94515 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; AD50 10.0 mg kg-1AFDSI-METABOLOMICS-762
ChEMBL: CHEMBL317766 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; AD50 0.51 mg kg-1AFDSI-METABOLOMICS-763
ChEMBL: CHEMBL95050 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; AD50 0.33 mg kg-1AFDSI-METABOLOMICS-764
ChEMBL: CHEMBL94409 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; AD50 0.84 mg kg-1AFDSI-METABOLOMICS-765
ChEMBL: CHEMBL442195 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; AD50 0.51 mg kg-1AFDSI-METABOLOMICS-766
ChEMBL: CHEMBL98626 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; AD50 1.25 mg kg-1AFDSI-METABOLOMICS-767
ChEMBL: AERUGINE (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; ActivityAFDSI-METABOLOMICS-768
ChEMBL: PULICATINS G (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; ActivityAFDSI-METABOLOMICS-769
ChEMBL: PULICATIN A (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; ActivityAFDSI-METABOLOMICS-770
ChEMBL: CHEMBL4108986 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; Ki 600.0 nMAFDSI-METABOLOMICS-771
ChEMBL: CHEMBL4111349 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; Ki 788.0 nMAFDSI-METABOLOMICS-772
ChEMBL: CHEMBL3979116 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; Ki 6416.0 nMAFDSI-METABOLOMICS-773
ChEMBL: CHEMBL3946661 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; Ki 1445.0 nMAFDSI-METABOLOMICS-774
ChEMBL: CHEMBL4108620 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; Ki 8808.0 nMAFDSI-METABOLOMICS-775
ChEMBL: CHEMBL3936595 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; Ki 7641.0 nMAFDSI-METABOLOMICS-776
ChEMBL: CHEMBL4112056 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; Ki 2358.0 nMAFDSI-METABOLOMICS-777
ChEMBL: SPIPERONE (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; Ki 63.0 nMAFDSI-METABOLOMICS-778
ChEMBL: CHEMBL522691 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; ActivityAFDSI-METABOLOMICS-779
ChEMBL: CHEMBL3897426 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; Activity 124.0 %AFDSI-METABOLOMICS-780
ChEMBL: CHEMBL384726 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; IC50 26.0 nMAFDSI-METABOLOMICS-781
ChEMBL: GECLOSPORIN (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; IC50 13.0 nMAFDSI-METABOLOMICS-782
ChEMBL: CHEMBL415597 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; IC50 70.0 nMAFDSI-METABOLOMICS-783
ChEMBL: CYCLOSPORINE (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; IC50 5.0 nMAFDSI-METABOLOMICS-784
ChEMBL: CHEMBL295601 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; ED50 10.0 mg.kg-1AFDSI-METABOLOMICS-785
ChEMBL: CHEMBL43773 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; ED50 8.5 mg.kg-1AFDSI-METABOLOMICS-786
ChEMBL: CHEMBL431407 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; ED50 10.0 mg.kg-1AFDSI-METABOLOMICS-787
Metabolic Profiles (external sources)
MetaboLights: Atlas of one-carbon metabolism in conventional and germ-free mice reveals folate as a key determinant of biochemical pathways (View at source ↗)AFDSI-METABPROF-132
MetaboLights: ATP-binding Cassette Sub-family C Member 5 (ABCC5) Functions as an Efflux Transporter of Glutamate Conjugates and Analogs (View at source ↗)AFDSI-METABPROF-133
MetaboLights: PTER is an N-acetyltaurine hydrolase that regulates feeding and obesity (View at source ↗)AFDSI-METABPROF-134
MetaboLights: A metabolome atlas of mouse brain on the global metabolic signature dynamics following short-term fasting (View at source ↗)AFDSI-METABPROF-135
MetaboLights: Phospholipid acyl chain diversity controls the tissue-specific assembly of mitochondrial cardiolipins (View at source ↗)AFDSI-METABPROF-136
KEGG: KEGG genome-based metabolic profile (mmu) (View at source ↗) — Genome-based pathway inference (KEGG) — reflects which metabolic pathways this species' annotated genes place it in, not experimentally measured metabolite presenceAFDSI-METABPROF-137
Cellular & Molecular Imaging (external sources)
IDR: OCT-MoS, a dataset of mouse skin squamous cell carcinoma stages by full-field optical coherence tomography (View on source archive ↗)AFDSI-CELL-772
IDR: Time-resolved structured illumination microscopy reveals key principles of Xist RNA spreading (View on source archive ↗)AFDSI-CELL-773
IDR: Regulation of single-cell genome organization into TADs and chromatin nanodomains (View on source archive ↗)AFDSI-CELL-774
IDR: Regulation of single-cell genome organization into TADs and chromatin nanodomains (View on source archive ↗)AFDSI-CELL-775
IDR: Integration of spatial and single-cell transcriptomic data elucidates mouse organogenesis (View on source archive ↗)AFDSI-CELL-776
IDR: Regulation of single-cell genome organization into TADs and chromatin nanodomains (View on source archive ↗)AFDSI-CELL-777
IDR: Regulation of single-cell genome organization into TADs and chromatin nanodomains (View on source archive ↗)AFDSI-CELL-778
IDR: Chromatin arranges in chains of mesoscale domains with nanoscale functional topography independent of cohesin (View on source archive ↗)AFDSI-CELL-779
IDR: idr0018-neff-histopathology/experimentA (View on source archive ↗)AFDSI-CELL-780
IDR: Predicting cell cycle stage from 3D single-cell nuclear-stained images (View on source archive ↗)AFDSI-CELL-781
Geographic range (Africa)
5,680 real GBIF-recorded occurrences across Africa — see this species on GBIF ↗.
This reflects real occurrence records submitted to GBIF, not a comprehensive range map — sampling effort varies significantly by country and region, so an absence here doesn't mean the species isn't present.
