Salmonella enterica subsp. enterica serovar Durban
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A strain of Salmonella enterica. Facts recorded for the species, such as pathogen–reservoir associations, are shown here too.
taxon 486992Indigenous / local names
No local or indigenous names recorded yet.
Status in Africa
Not yet assessed
Occurrence records: Recorded mostly outside Africa. 5,480 of 224,002 GBIF records (2%) are from Africa (checked 10/11/2026). A hint from GBIF and the genomes on this Hub, not an assessment: GBIF includes zoo and travel records.
Taxonomic classification
Genome browser
Sequence records
genome (fasta)
mirroredOrigin: hub
2 downloads
First synced: 10/11/2026 · Last updated: 10/11/2026
Source: NCBI GCF_019360055.1 · View at source ↗
Download annotation (GFF3) · Download CDS (FASTA) · Download proteins (FASTA)
Collection: Tanzania: Moshi
Sequencing: Illumina HiSeq · SPAdes v. 3.11 · 152x coverage
Released: 2021-07-27 · Submitted by: Massey University
publiccc0AFDSI-SEQ-2092 Benefit-sharing under CBD Decision 16/2 and national frameworks →Country of origin: TZ · PIC: unknown · MAT: unknown
GoaT: no record for this species (not eukaryotic, or not yet sequenced)
Publicly accessible — no request needed.
genome (fasta)
mirroredOrigin: hub
2 downloads
First synced: 10/11/2026 · Last updated: 10/11/2026
Source: NCBI GCF_019360135.1 · View at source ↗
Download annotation (GFF3) · Download CDS (FASTA) · Download proteins (FASTA)
Collection: Tanzania: Moshi
Sequencing: Illumina HiSeq · SPAdes v. 3.11 · 96x coverage
Released: 2021-07-27 · Submitted by: Massey University
publiccc0AFDSI-SEQ-2094 Benefit-sharing under CBD Decision 16/2 and national frameworks →Country of origin: TZ · PIC: unknown · MAT: unknown
GoaT: no record for this species (not eukaryotic, or not yet sequenced)
Publicly accessible — no request needed.
genome (fasta)
mirroredOrigin: hub
2 downloads
First synced: 10/11/2026 · Last updated: 10/11/2026
Source: NCBI GCF_019360175.1 · View at source ↗
Download annotation (GFF3) · Download CDS (FASTA) · Download proteins (FASTA)
Collection: Tanzania: Moshi
Sequencing: Illumina HiSeq · SPAdes v. 3.11 · 90x coverage
Released: 2021-07-27 · Submitted by: Massey University
publiccc0AFDSI-SEQ-2096 Benefit-sharing under CBD Decision 16/2 and national frameworks →Country of origin: TZ · PIC: unknown · MAT: unknown
GoaT: no record for this species (not eukaryotic, or not yet sequenced)
Publicly accessible — no request needed.
genome (fasta)
mirroredOrigin: hub
2 downloads
First synced: 10/11/2026 · Last updated: 10/11/2026
Source: NCBI GCF_019360925.1 · View at source ↗
Download annotation (GFF3) · Download CDS (FASTA) · Download proteins (FASTA)
Collection: Tanzania: Moshi
Sequencing: Illumina HiSeq · SPAdes v. 3.11 · 68x coverage
Released: 2021-07-27 · Submitted by: Massey University
publiccc0AFDSI-SEQ-2115 Benefit-sharing under CBD Decision 16/2 and national frameworks →Country of origin: TZ · PIC: unknown · MAT: unknown
GoaT: no record for this species (not eukaryotic, or not yet sequenced)
Publicly accessible — no request needed.
genome (fasta)
mirroredOrigin: hub
2 downloads
First synced: 10/11/2026 · Last updated: 10/11/2026
Source: NCBI GCF_019360955.1 · View at source ↗
Download annotation (GFF3) · Download CDS (FASTA) · Download proteins (FASTA)
Collection: Tanzania: Moshi
Sequencing: Illumina HiSeq · SPAdes v. 3.11 · 65x coverage
Released: 2021-07-27 · Submitted by: Massey University
publiccc0AFDSI-SEQ-2116 Benefit-sharing under CBD Decision 16/2 and national frameworks →Country of origin: TZ · PIC: unknown · MAT: unknown
GoaT: no record for this species (not eukaryotic, or not yet sequenced)
Publicly accessible — no request needed.
genome (fasta)
mirroredOrigin: hub
7 downloads
First synced: 10/11/2026 · Last updated: 10/11/2026
Source: NCBI GCF_019361005.1 · View at source ↗
Download annotation (GFF3) · Download CDS (FASTA) · Download proteins (FASTA)
Collection: Tanzania: Moshi
Sequencing: Illumina HiSeq · SPAdes v. 3.11 · 45x coverage
Released: 2021-07-27 · Submitted by: Massey University
publiccc0AFDSI-SEQ-2119 Benefit-sharing under CBD Decision 16/2 and national frameworks →Country of origin: TZ · PIC: unknown · MAT: unknown
GoaT: no record for this species (not eukaryotic, or not yet sequenced)
Publicly accessible — no request needed.
genome (fasta)
mirroredOrigin: hub
2 downloads
First synced: 10/11/2026 · Last updated: 10/11/2026
Source: NCBI GCF_019360105.1 · View at source ↗
Download annotation (GFF3) · Download CDS (FASTA) · Download proteins (FASTA)
Collection: Tanzania: Moshi
Sequencing: Illumina HiSeq · SPAdes v. 3.11 · 99x coverage
Released: 2021-07-27 · Submitted by: Massey University
publiccc0AFDSI-SEQ-2093 Benefit-sharing under CBD Decision 16/2 and national frameworks →Country of origin: TZ · PIC: unknown · MAT: unknown
GoaT: no record for this species (not eukaryotic, or not yet sequenced)
Publicly accessible — no request needed.
genome (fasta)
mirroredOrigin: hub
2 downloads
First synced: 10/11/2026 · Last updated: 10/11/2026
Source: NCBI GCF_019360995.1 · View at source ↗
Download annotation (GFF3) · Download CDS (FASTA) · Download proteins (FASTA)
Collection: Tanzania: Moshi
Sequencing: Illumina HiSeq · SPAdes v. 3.11 · 136x coverage
Released: 2021-07-27 · Submitted by: Massey University
publiccc0AFDSI-SEQ-2118 Benefit-sharing under CBD Decision 16/2 and national frameworks →Country of origin: TZ · PIC: unknown · MAT: unknown
GoaT: no record for this species (not eukaryotic, or not yet sequenced)
Publicly accessible — no request needed.
No AlphaFold DB proteome found for this species.
Cellular & Molecular Imaging (external sources)
BioImage Archive: (View on source archive ↗)AFDSI-CELL-6047
BioImage Archive: Programmed Cell Death Pathways Coordinate Neutrophil and Macrophage Clearance in Zebrafish and Are Differentially Exploited by Salmonella Typhimurium (View on source archive ↗)AFDSI-CELL-6049
BioImage Archive: (View on source archive ↗)AFDSI-CELL-6048
BioImage Archive: Programmed Cell Death Pathways Coordinate Neutrophil and Macrophage Clearance in Zebrafish and Are Differentially Exploited by Salmonella Typhimurium (View on source archive ↗)AFDSI-CELL-6050
BioImage Archive: Reference raw BioImaging dataset to assess the phenotypic trait diversity of bryophytes within the family Scapaniaceae (View on source archive ↗)AFDSI-CELL-6052
BioImage Archive: Serial-two photon tomography of Salmonella-infected mouse spleen (View on source archive ↗)AFDSI-CELL-6054
BioImage Archive: Reference raw BioImaging dataset to assess the phenotypic trait diversity of bryophytes within the family Scapaniaceae (View on source archive ↗)AFDSI-CELL-6051
BioImage Archive: Serial-two photon tomography of Salmonella-infected mouse spleen (View on source archive ↗)AFDSI-CELL-6053
BioImage Archive: In support of: Immunocompetent Cell Targeting by Food-Additive Titanium Dioxide (View on source archive ↗)AFDSI-CELL-6055
BioImage Archive: Estimating phenotypic traits with morphometry from 16 specimens of thallose liverworts of biological soil crusts collected in Southern Sweden and Germany (View on source archive ↗)AFDSI-CELL-6056
Geographic range (Africa)
5,480 real GBIF-recorded occurrences across Africa — see this species on GBIF ↗.
This reflects real occurrence records submitted to GBIF, not a comprehensive range map — sampling effort varies significantly by country and region, so an absence here doesn't mean the species isn't present.
One Health: known pathogen/reservoir associations
A real, citation-backed link between this species and a documented pathogen or wildlife reservoir host — see the Pathogen-Reservoir page (under One Health) for the full pilot list.
Known reservoir host: Agama agama Endemic to Africa
Recorded for the species Salmonella enterica.
Landmark study establishing Agama agama as a natural intestinal host reservoir for Salmonella enterica
Evidence: COLLARD P, MONTEFIORE D. The agama lizard as reservoir of Salmonellae in Nigeria. Nature (1957). https://doi.org/10.1038/179164b0. PMID: 13400133. AFDSI-ASSOC-13
Curated by Ms Sarah C. Ihenko (University of Cambridge, United Kingdom) · ORCID 0009-0009-8896-7809 ✓. Reviewed by the African DSI DataBank.
Known reservoir host: Sus scrofa Native to Africa
Recorded for the species Salmonella enterica.
Recovered Salmonella enterica from ileocecal lymph nodes (26.0%), carcass surface swabs (16.0%), and pork meat (14.0%) of 100 slaughtered pigs
Evidence: Gomes-Neves E, Antunes P, Tavares A, Themudo P, Cardoso MF, Gärtner F, Costa JM, Peixe L. Salmonella cross-contamination in swine abattoirs in Portugal: Carcasses, meat and meat handlers. Int J Food Microbiol (2012). https://doi.org/10.1016/j.ijfoodmicro.2012.04.015. PMID: 22607810. AFDSI-ASSOC-12
Curated by Ms Sarah C. Ihenko (University of Cambridge, United Kingdom) · ORCID 0009-0009-8896-7809 ✓. Reviewed by the African DSI DataBank.
Known reservoir host: Gallus gallus domesticus Linnaeus Introduced
Recorded for the species Salmonella enterica.
Isolated 34 Salmonella enterica strains across 8 serotypes from cloacal swabs and farm environments of free-range village chickens (Gallus gallus)
Evidence: Mohammed Jajere S, Hassan L, Zakaria Z, Abu J, Abdul Aziz S. Antibiogram Profiles and Risk Factors for Multidrug Resistance of Salmonella enterica Recovered from Village Chickens (Gallus gallus domesticus Linnaeus) and Other Environmental Sources in the Central and Southern Peninsular Malaysia. Antibiotics (Basel) (2020). https://doi.org/10.3390/antibiotics9100701. PMID: 33076451. AFDSI-ASSOC-11
Curated by Ms Sarah C. Ihenko (University of Cambridge, United Kingdom) · ORCID 0009-0009-8896-7809 ✓. Reviewed by the African DSI DataBank.
Known reservoir host: Bos taurus Domesticated
Recorded for the species Salmonella enterica.
The three most common serotypes were Salmonella enterica subspecies enterica serotype Heidelberg (n = 200), Salmonella enterica subspecies enterica serotype Enteritidis (n = 170) and Salmonella enterica subspecies enterica serotype Typhimurium (n = 146).
Evidence: Gelaw AK, Nthaba P, Matle I. Detection of Salmonella from animal sources in South Africa between 2007 and 2014. J S Afr Vet Assoc (2018). https://doi.org/10.4102/jsava.v89i0.1643. PMID: 30456978. AFDSI-ASSOC-5
Curated by Dr Ichrak Hayah (Mohammed V University in Rabat, Morocco) · ORCID 0000-0002-0783-9672. Reviewed by the African DSI DataBank.