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Benefit-sharing from DSI rests on the provider country's national framework. Where it requires bilateral benefit-sharing for DSI, those terms apply. Where it gives effect to the CBD multilateral mechanism, users of its publicly available DSI should share benefits through it: all users non-monetary benefits, as appropriate, and commercial users above set size thresholds also monetary contributions to the Cali Fund. Where it is silent on DSI, the position is not yet settled: check with the country's competent national authority, through the ABS service. Any terms agreed when the genetic resources were accessed still apply. Access and benefit-sharing questions are handled by the ABS service, not by the DataBank. Learn more →
A strain of Pseudomonas amygdali. Facts recorded for the species, such as pathogen–reservoir associations, are shown here too.
taxon 129138Also known as: Pseudomonas syringae pv. morsprunorum
No local or indigenous names recorded yet.
Not yet assessed
Occurrence records: Recorded outside Africa only. 0 of 383 GBIF records (0%) are from Africa (checked 10/12/2026). A hint from GBIF and the genomes on this Hub, not an assessment: GBIF includes zoo and travel records.
Species that share this one's nearest groups in NCBI Taxonomy. This is how they're classified, not a phylogeny. See it in the species tree.
Origin: hub
56 downloads
First synced: 10/11/2026 · Last updated: 10/12/2026
Source: NCBI GCF_054719885.1 · View at source ↗
Download annotation (GFF3) · Download CDS (FASTA) · Download proteins (FASTA)
Collection: South Africa
Sequencing: Oxford Nanopore PromethION · Hybracter v. 0.11.2 · 1793.33x coverage
Released: 2026-01-25 · Submitted by: Michigan State University
publiccc0AFDSI-SEQ-5890 Benefit-sharing under CBD Decision 16/2 and national frameworks →Country of origin: ZA · PIC: unknown · MAT: unknown
GoaT: no record for this species (not eukaryotic, or not yet sequenced)
Publicly accessible — no request needed.
Origin: hub
39 downloads
First synced: 10/11/2026 · Last updated: 10/12/2026
Source: NCBI GCF_054719785.1 · View at source ↗
Download annotation (GFF3) · Download CDS (FASTA) · Download proteins (FASTA)
Collection: South Africa
Sequencing: Oxford Nanopore PromethION · Hybracter v. 0.11.2 · 1035x coverage
Released: 2026-01-25 · Submitted by: Michigan State University
publiccc0AFDSI-SEQ-5891 Benefit-sharing under CBD Decision 16/2 and national frameworks →Country of origin: ZA · PIC: unknown · MAT: unknown
GoaT: no record for this species (not eukaryotic, or not yet sequenced)
Publicly accessible — no request needed.
Origin: hub
54 downloads
First synced: 10/11/2026 · Last updated: 10/12/2026
Source: NCBI GCF_054719905.1 · View at source ↗
Download annotation (GFF3) · Download CDS (FASTA) · Download proteins (FASTA)
Collection: South Africa
Sequencing: Oxford Nanopore PromethION · Hybracter v. 0.11.2 · 1591.67x coverage
Released: 2026-01-25 · Submitted by: Michigan State University
publiccc0AFDSI-SEQ-6044 Benefit-sharing under CBD Decision 16/2 and national frameworks →Country of origin: ZA · PIC: unknown · MAT: unknown
GoaT: no record for this species (not eukaryotic, or not yet sequenced)
Publicly accessible — no request needed.
Origin: hub
55 downloads
First synced: 10/11/2026 · Last updated: 10/12/2026
Source: NCBI GCF_054850605.1 · View at source ↗
Download annotation (GFF3) · Download CDS (FASTA) · Download proteins (FASTA)
Collection: South Africa
Sequencing: Oxford Nanopore PromethION · Hybracter v. 0.11.2 · 978.33x coverage
Released: 2026-01-30 · Submitted by: Michigan State University
publiccc0AFDSI-SEQ-6045 Benefit-sharing under CBD Decision 16/2 and national frameworks →Country of origin: ZA · PIC: unknown · MAT: unknown
GoaT: no record for this species (not eukaryotic, or not yet sequenced)
Publicly accessible — no request needed.
Origin: hub
40 downloads
First synced: 10/11/2026 · Last updated: 10/12/2026
Source: NCBI GCF_054719705.1 · View at source ↗
Download annotation (GFF3) · Download CDS (FASTA) · Download proteins (FASTA)
Collection: South Africa
Sequencing: Oxford Nanopore PromethION · Hybracter v. 0.11.2 · 2125x coverage
Released: 2026-01-25 · Submitted by: Michigan State University
publiccc0AFDSI-SEQ-5889 Benefit-sharing under CBD Decision 16/2 and national frameworks →Country of origin: ZA · PIC: unknown · MAT: unknown
GoaT: no record for this species (not eukaryotic, or not yet sequenced)
Publicly accessible — no request needed.
hrpK — 76 aa
protein 11365 — 164 aa
protein 11366 — 126 aa
No AlphaFold DB proteome found for this species.
pLDDT confidence: 55.3
Auto-synced from AlphaFold DB AF-Q83YN2-F1 · View at source ↗
publiccc_byAFDSI-STRUCT-20037-V2pLDDT confidence: 59.1
Auto-synced from AlphaFold DB AF-Q83YN0-F1 · View at source ↗
publiccc_byAFDSI-STRUCT-20039-V2pLDDT confidence: 94.3
Auto-synced from AlphaFold DB AF-Q83YN1-F1 · View at source ↗
publiccc_byAFDSI-STRUCT-20041-V2pLDDT confidence: 55.3
Auto-synced from AlphaFold DB AF-Q83YN2-F1 · View at source ↗
publiccc_byAFDSI-STRUCT-20036-V1pLDDT confidence: 59.1
Auto-synced from AlphaFold DB AF-Q83YN0-F1 · View at source ↗
publiccc_byAFDSI-STRUCT-20038-V1BioImage Archive: Microscopy data - Cooperative colonization of the host and pathogen dissemination involves stochastic and spatially structured expression of virulence traits (View on source archive ↗)AFDSI-CELL-4472
BioImage Archive: Microscopy data - Cooperative colonization of the host and pathogen dissemination involves stochastic and spatially structured expression of virulence traits (View on source archive ↗)AFDSI-CELL-4471
BioImage Archive: Single-cell level LasR-mediated quorum sensing response of Pseudomonas aeruginosa to pulses of signal molecules (View on source archive ↗)AFDSI-CELL-4473
BioImage Archive: Pseudomonas aeruginosa dynamically prioritizes motility and resource recycling during prolonged starvation (View on source archive ↗)AFDSI-CELL-4475
BioImage Archive: Spatial lung niches shape Pseudomonas aeruginosa persistence (View on source archive ↗)AFDSI-CELL-4478
BioImage Archive: Single-cell level LasR-mediated quorum sensing response of Pseudomonas aeruginosa to pulses of signal molecules (View on source archive ↗)AFDSI-CELL-4474
BioImage Archive: Pseudomonas aeruginosa dynamically prioritizes motility and resource recycling during prolonged starvation (View on source archive ↗)AFDSI-CELL-4476
BioImage Archive: Spatial lung niches shape Pseudomonas aeruginosa persistence (View on source archive ↗)AFDSI-CELL-4477
BioImage Archive: Two antagonistic response regulators control Pseudomonas aeruginosa polarization during mechanotaxis (View on source archive ↗)AFDSI-CELL-4480
BioImage Archive: Two antagonistic response regulators control Pseudomonas aeruginosa polarization during mechanotaxis (View on source archive ↗)AFDSI-CELL-4479
No African occurrence records found for this species in GBIF — please confirm this is within this platform's African-origin/endemic/indigenous scope. This is a non-blocking, informational check only: GBIF coverage is real but imperfect, so a genuinely African species can still show no records here.
A node's own derived bioinformatics-analysis output (e.g. an SSR/microsatellite discovery archive) run against this species' own genome data — see the Derived Analysis page for the full catalog.
MegaSSR — ssr_discovery
derived from genome record AFDSI-SEQ-6045
File: GCF_054850605.1_megassr_results.tar.gz
Tool version: MegaSSR v3.0.0 (UM6P patched)
Native — captured by Northern-MA-UM6P-8787752738 · View at source ↗
cc_by public Country of origin not recorded: see how benefit-sharing works →
AFDSI-ANALYSIS-20532MegaSSR — ssr_discovery
derived from genome record AFDSI-SEQ-6044
File: GCF_054719905.1_megassr_results.tar.gz
Tool version: MegaSSR v3.0.0 (UM6P patched)
Native — captured by Northern-MA-UM6P-8787752738 · View at source ↗
cc_by public Country of origin not recorded: see how benefit-sharing works →
AFDSI-ANALYSIS-20531MegaSSR — ssr_discovery
derived from genome record AFDSI-SEQ-5890
File: GCF_054719885.1_megassr_results.tar.gz
Tool version: MegaSSR v3.0.0 (UM6P patched)
Native — captured by Northern-MA-UM6P-8787752738 · View at source ↗
cc_by public Country of origin not recorded: see how benefit-sharing works →
AFDSI-ANALYSIS-20530MegaSSR — ssr_discovery
derived from genome record AFDSI-SEQ-5891
File: GCF_054719785.1_megassr_results.tar.gz
Tool version: MegaSSR v3.0.0 (UM6P patched)
Native — captured by Northern-MA-UM6P-8787752738 · View at source ↗
cc_by public Country of origin not recorded: see how benefit-sharing works →
AFDSI-ANALYSIS-20529MegaSSR — ssr_discovery
derived from genome record AFDSI-SEQ-5889
File: GCF_054719705.1_megassr_results.tar.gz
Tool version: MegaSSR v3.0.0 (UM6P patched)
Native — captured by Northern-MA-UM6P-8787752738 · View at source ↗
cc_by public Country of origin not recorded: see how benefit-sharing works →
AFDSI-ANALYSIS-20528