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Benefit-sharing from DSI rests on the provider country's national framework. Where it requires bilateral benefit-sharing for DSI, those terms apply. Where it gives effect to the CBD multilateral mechanism, users of its publicly available DSI should share benefits through it: all users non-monetary benefits, as appropriate, and commercial users above set size thresholds also monetary contributions to the Cali Fund. Where it is silent on DSI, the position is not yet settled: check with the country's competent national authority, through the ABS service. Any terms agreed when the genetic resources were accessed still apply. Access and benefit-sharing questions are handled by the ABS service, not by the DataBank. Learn more →
A strain of Pseudomonas amygdali. Facts recorded for the species, such as pathogen–reservoir associations, are shown here too.
taxon 322Also known as: PSEUDOMONAS SYRINGAE (PV. TABACI), Pseudomonas syringae pv. tabaci, Pseudomonas syringae tabaci
No local or indigenous names recorded yet.
Not yet assessed
Occurrence records: Recorded outside Africa only. 0 of 383 GBIF records (0%) are from Africa (checked 10/12/2026). A hint from GBIF and the genomes on this Hub, not an assessment: GBIF includes zoo and travel records.
Species that share this one's nearest groups in NCBI Taxonomy. This is how they're classified, not a phylogeny. See it in the species tree.
Origin: hub
48 downloads
First synced: 10/11/2026 · Last updated: 10/12/2026
Source: NCBI GCF_003700505.1 · View at source ↗
Download annotation (GFF3) · Download CDS (FASTA) · Download proteins (FASTA)
Collection: Malawi
Sequencing: Illumina MiSeq · CLC assembly cell v. 4.2 · 69.684x coverage
Released: 2018-10-30 · Submitted by: University of Toronto
publiccc0AFDSI-SEQ-6376 Benefit-sharing under CBD Decision 16/2 and national frameworks →Country of origin: MW · PIC: unknown · MAT: unknown
GoaT: no record for this species (not eukaryotic, or not yet sequenced)
Publicly accessible — no request needed.
dapB — 267 aa
psyI — 226 aa
ttr — 177 aa
tabA — 420 aa
tblA — 252 aa
protein 11372 — 136 aa
tabB — 276 aa
No AlphaFold DB proteome found for this species.
PRIDE — project-level reference (metadata only; no per-protein identifications are available via PRIDE's public API)
Identification of flagellin peptides in N. benthamiana apoplastic fluid (PXD011823) ↗AFDSI-PROJREF-800
ChEMBL rows are compounds active against a protein target from this organism — not confirmed as compounds the species itself produces, unlike ANPDB's.
ChEMBL: CHEMBL5081058 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; MIC 0.5 ug.mL-1AFDSI-METABOLOMICS-2339
ChEMBL: CHEMBL5079826 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; ActivityAFDSI-METABOLOMICS-2340
ChEMBL: CHEMBL5089382 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; ActivityAFDSI-METABOLOMICS-2342
ChEMBL: CHEMBL2270644 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; MIC 2250.0 nMAFDSI-METABOLOMICS-2336
ChEMBL: 3-CHLORO-1-METHYL-1H-PYRAZOLE-5-CARBOXYLIC ACID (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; ActivityAFDSI-METABOLOMICS-2337
ChEMBL: CHEMBL5081058 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; MIC 0.5 ug.mL-1AFDSI-METABOLOMICS-2338
ChEMBL: CHEMBL5079826 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; ActivityAFDSI-METABOLOMICS-2341
ChEMBL: CHEMBL5089382 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; ActivityAFDSI-METABOLOMICS-2343
ChEMBL: CHEMBL5081654 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; Activity
pLDDT confidence: 95.8
Auto-synced from AlphaFold DB AF-P16966-F1 · View at source ↗
publiccc_byAFDSI-STRUCT-20047-V3pLDDT confidence: 97.1
Auto-synced from AlphaFold DB AF-Q52419-F1 · View at source ↗
publiccc_byAFDSI-STRUCT-20043-V2pLDDT confidence: 91.3
Auto-synced from AlphaFold DB AF-P31850-F1 · View at source ↗
publiccc_byAFDSI-STRUCT-20051-V2pLDDT confidence: 95.8
Auto-synced from AlphaFold DB AF-P16966-F1 · View at source ↗
publiccc_byAFDSI-STRUCT-20046-V2pLDDT confidence: 88.3
Auto-synced from AlphaFold DB AF-P31849-F1 · View at source ↗
publiccc_byAFDSI-STRUCT-20053-V2BioImage Archive: Microscopy data - Cooperative colonization of the host and pathogen dissemination involves stochastic and spatially structured expression of virulence traits (View on source archive ↗)AFDSI-CELL-4491
BioImage Archive: Single-cell level LasR-mediated quorum sensing response of Pseudomonas aeruginosa to pulses of signal molecules (View on source archive ↗)AFDSI-CELL-4492
BioImage Archive: Single-cell level LasR-mediated quorum sensing response of Pseudomonas aeruginosa to pulses of signal molecules (View on source archive ↗)AFDSI-CELL-4493
BioImage Archive: Pseudomonas aeruginosa dynamically prioritizes motility and resource recycling during prolonged starvation (View on source archive ↗)AFDSI-CELL-4494
BioImage Archive: Pseudomonas aeruginosa dynamically prioritizes motility and resource recycling during prolonged starvation (View on source archive ↗)AFDSI-CELL-4495
BioImage Archive: Spatial lung niches shape Pseudomonas aeruginosa persistence (View on source archive ↗)AFDSI-CELL-4496
BioImage Archive: Two antagonistic response regulators control Pseudomonas aeruginosa polarization during mechanotaxis (View on source archive ↗)AFDSI-CELL-4498
BioImage Archive: Topical Formulation of Repurposed FDA-Approved Compounds Inhibits Pseudomonas aeruginosa ExoU and Improves Corneal Infection Outcome (View on source archive ↗)AFDSI-CELL-4500
BioImage Archive: Spatial lung niches shape Pseudomonas aeruginosa persistence (View on source archive ↗)AFDSI-CELL-4497
BioImage Archive: Two antagonistic response regulators control Pseudomonas aeruginosa polarization during mechanotaxis (View on source archive ↗)AFDSI-CELL-4499
No African occurrence records found for this species in GBIF — please confirm this is within this platform's African-origin/endemic/indigenous scope. This is a non-blocking, informational check only: GBIF coverage is real but imperfect, so a genuinely African species can still show no records here.
A node's own derived bioinformatics-analysis output (e.g. an SSR/microsatellite discovery archive) run against this species' own genome data — see the Derived Analysis page for the full catalog.
MegaSSR — ssr_discovery
derived from genome record AFDSI-SEQ-6376
File: GCF_003700505.1_megassr_results.tar.gz
Tool version: MegaSSR v3.0.0 (UM6P patched)
Native — captured by Northern-MA-UM6P-8787752738 · View at source ↗
cc_by public Country of origin not recorded: see how benefit-sharing works →
AFDSI-ANALYSIS-18575ChEMBL: CHEMBL5081654 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; ActivityAFDSI-METABOLOMICS-2344