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Benefit-sharing from DSI rests on the provider country's national framework. Where it requires bilateral benefit-sharing for DSI, those terms apply. Where it gives effect to the CBD multilateral mechanism, users of its publicly available DSI should share benefits through it: all users non-monetary benefits, as appropriate, and commercial users above set size thresholds also monetary contributions to the Cali Fund. Where it is silent on DSI, the position is not yet settled: check with the country's competent national authority, through the ABS service. Any terms agreed when the genetic resources were accessed still apply. Access and benefit-sharing questions are handled by the ABS service, not by the DataBank. Learn more →
A strain of Pseudomonas syringae. Facts recorded for the species, such as pathogen–reservoir associations, are shown here too.
taxon 321Also known as: Pseudomonas syringae (PV. SYRINGAE), Pseudomonas syringae syringae
No local or indigenous names recorded yet.
Not yet assessed
Occurrence records: Recorded mostly outside Africa. 38 of 2,070 GBIF records (2%) are from Africa (checked 10/12/2026). A hint from GBIF and the genomes on this Hub, not an assessment: GBIF includes zoo and travel records.
Species that share this one's nearest groups in NCBI Taxonomy. This is how they're classified, not a phylogeny. See it in the species tree.
Origin: hub
53 downloads
First synced: 10/11/2026 · Last updated: 10/12/2026
Source: NCBI GCF_002917215.1 · View at source ↗
Download annotation (GFF3) · Download CDS (FASTA) · Download proteins (FASTA)
Collection: Lesotho
Sequencing: Illumina MiSeq · SPAdes v. 3.7.0 · 84x coverage
Released: 2018-02-05 · Submitted by: NIAB East Malling Research
publiccc0AFDSI-SEQ-6065 Benefit-sharing under CBD Decision 16/2 and national frameworks →Country of origin: LS · PIC: unknown · MAT: unknown
GoaT: no record for this species (not eukaryotic, or not yet sequenced)
Publicly accessible — no request needed.
Origin: hub
52 downloads
First synced: 10/11/2026 · Last updated: 10/12/2026
Source: NCBI GCF_002611605.1 · View at source ↗
Download annotation (GFF3) · Download CDS (FASTA) · Download proteins (FASTA)
Collection: South Africa
Sequencing: 454 · SPAdes v. 2.3 · 12x coverage
Released: 2017-10-20 · Submitted by: University of Pretoria
publiccc0AFDSI-SEQ-6067 Benefit-sharing under CBD Decision 16/2 and national frameworks →Country of origin: ZA · PIC: unknown · MAT: unknown
GoaT: no record for this species (not eukaryotic, or not yet sequenced)
Publicly accessible — no request needed.
Origin: hub
53 downloads
First synced: 10/11/2026 · Last updated: 10/12/2026
Source: NCBI GCF_002611615.1 · View at source ↗
Download annotation (GFF3) · Download CDS (FASTA) · Download proteins (FASTA)
Collection: South Africa
Sequencing: 454 · SPAdes v. 2.3 · 12x coverage
Released: 2017-10-20 · Submitted by: University of Pretoria
publiccc0AFDSI-SEQ-6068 Benefit-sharing under CBD Decision 16/2 and national frameworks →Country of origin: ZA · PIC: unknown · MAT: unknown
GoaT: no record for this species (not eukaryotic, or not yet sequenced)
Publicly accessible — no request needed.
Origin: hub
52 downloads
First synced: 10/11/2026 · Last updated: 10/12/2026
Source: NCBI GCF_002917195.1 · View at source ↗
Download annotation (GFF3) · Download CDS (FASTA) · Download proteins (FASTA)
Collection: Kenya
Sequencing: Illumina MiSeq · SPAdes v. 3.7.0 · 83x coverage
Released: 2018-02-05 · Submitted by: NIAB East Malling Research
publiccc0AFDSI-SEQ-6416 Benefit-sharing under CBD Decision 16/2 and national frameworks →Country of origin: KE · PIC: unknown · MAT: unknown
GoaT: no record for this species (not eukaryotic, or not yet sequenced)
Publicly accessible — no request needed.
Origin: hub
52 downloads
First synced: 10/11/2026 · Last updated: 10/12/2026
Source: NCBI GCF_028435255.1 · View at source ↗
Download annotation (GFF3) · Download CDS (FASTA) · Download proteins (FASTA)
Collection: Tunisia: Mornag
Sequencing: Illumina HiSeq · SPAdes v. shovill 1.1.0 · 177x coverage
Released: 2023-02-02 · Submitted by: Institute for Agricultural and Fisheries Research (ILVO)
publiccc0AFDSI-SEQ-6418 Benefit-sharing under CBD Decision 16/2 and national frameworks →Country of origin: TN · PIC: unknown · MAT: unknown
GoaT: no record for this species (not eukaryotic, or not yet sequenced)
Publicly accessible — no request needed.
Origin: hub
52 downloads
First synced: 10/11/2026 · Last updated: 10/12/2026
Source: NCBI GCF_002917175.1 · View at source ↗
Download annotation (GFF3) · Download CDS (FASTA) · Download proteins (FASTA)
Collection: Kenya
Sequencing: Illumina MiSeq · SPAdes v. 3.7.0 · 83x coverage
Released: 2018-02-05 · Submitted by: NIAB East Malling Research
publiccc0AFDSI-SEQ-6419 Benefit-sharing under CBD Decision 16/2 and national frameworks →Country of origin: KE · PIC: unknown · MAT: unknown
GoaT: no record for this species (not eukaryotic, or not yet sequenced)
Publicly accessible — no request needed.
Origin: hub
54 downloads
First synced: 10/11/2026 · Last updated: 10/12/2026
Source: NCBI GCF_002917155.1 · View at source ↗
Download annotation (GFF3) · Download CDS (FASTA) · Download proteins (FASTA)
Collection: Lesotho
Sequencing: Illumina MiSeq · SPAdes v. 3.7.0 · 78x coverage
Released: 2018-02-05 · Submitted by: NIAB East Malling Research
publiccc0AFDSI-SEQ-6066 Benefit-sharing under CBD Decision 16/2 and national frameworks →Country of origin: LS · PIC: unknown · MAT: unknown
GoaT: no record for this species (not eukaryotic, or not yet sequenced)
Publicly accessible — no request needed.
No AlphaFold DB proteome found for this species.
PRIDE — project-level reference (metadata only; no per-protein identifications are available via PRIDE's public API)
Pseudomonas syringae effector HopZ3 suppresses PTO immune pathway in tomato by acetylation (PXD022953) ↗AFDSI-PROJREF-834
ChEMBL rows are compounds active against a protein target from this organism — not confirmed as compounds the species itself produces, unlike ANPDB's.
ChEMBL: KKLFKKILKFL-NH2 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; ActivityAFDSI-METABOLOMICS-2500
ChEMBL: KKLFKKILKVL-NH2 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; ActivityAFDSI-METABOLOMICS-2501
ChEMBL: CHEMBL2252940 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; ActivityAFDSI-METABOLOMICS-2502
ChEMBL: CHEMBL2252936 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; ActivityAFDSI-METABOLOMICS-2503
ChEMBL: CHEMBL2252932 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; ActivityAFDSI-METABOLOMICS-2504
ChEMBL: CHEMBL2252942 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; ActivityAFDSI-METABOLOMICS-2505
ChEMBL: CHEMBL2252941 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; ActivityAFDSI-METABOLOMICS-2506
ChEMBL: CHEMBL2252939 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; ActivityAFDSI-METABOLOMICS-2507
ChEMBL: CHEMBL2252938 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; Activity
BioImage Archive: Plasmodesmal closure elicits stress responses (View on source archive ↗)AFDSI-CELL-5479
BioImage Archive: Microscopy data - Cooperative colonization of the host and pathogen dissemination involves stochastic and spatially structured expression of virulence traits (View on source archive ↗)AFDSI-CELL-5476
BioImage Archive: Plasmodesmal closure elicits stress responses (View on source archive ↗)AFDSI-CELL-5478
BioImage Archive: Microscopy data - Cooperative colonization of the host and pathogen dissemination involves stochastic and spatially structured expression of virulence traits (View on source archive ↗)AFDSI-CELL-5477
BioImage Archive: Single-cell level LasR-mediated quorum sensing response of Pseudomonas aeruginosa to pulses of signal molecules (View on source archive ↗)AFDSI-CELL-5480
BioImage Archive: Pseudomonas aeruginosa dynamically prioritizes motility and resource recycling during prolonged starvation (View on source archive ↗)AFDSI-CELL-5482
BioImage Archive: Spatial lung niches shape Pseudomonas aeruginosa persistence (View on source archive ↗)AFDSI-CELL-5484
BioImage Archive: Two antagonistic response regulators control Pseudomonas aeruginosa polarization during mechanotaxis (View on source archive ↗)AFDSI-CELL-5486
BioImage Archive: Topical Formulation of Repurposed FDA-Approved Compounds Inhibits Pseudomonas aeruginosa ExoU and Improves Corneal Infection Outcome (View on source archive ↗)AFDSI-CELL-5488
BioImage Archive: Single-cell level LasR-mediated quorum sensing response of Pseudomonas aeruginosa to pulses of signal molecules (View on source archive ↗)AFDSI-CELL-5481
38 real GBIF-recorded occurrences across Africa — see this species on GBIF ↗.
This reflects real occurrence records submitted to GBIF, not a comprehensive range map — sampling effort varies significantly by country and region, so an absence here doesn't mean the species isn't present.
A node's own derived bioinformatics-analysis output (e.g. an SSR/microsatellite discovery archive) run against this species' own genome data — see the Derived Analysis page for the full catalog.
MegaSSR — ssr_discovery
derived from genome record AFDSI-SEQ-6418
File: GCF_028435255.1_megassr_results.tar.gz
Tool version: MegaSSR v3.0.0 (UM6P patched)
Native — captured by Northern-MA-UM6P-8787752738 · View at source ↗
cc_by public Country of origin not recorded: see how benefit-sharing works →
AFDSI-ANALYSIS-19652MegaSSR — ssr_discovery
derived from genome record AFDSI-SEQ-6065
File: GCF_002917215.1_megassr_results.tar.gz
Tool version: MegaSSR v3.0.0 (UM6P patched)
Native — captured by Northern-MA-UM6P-8787752738 · View at source ↗
cc_by public Country of origin not recorded: see how benefit-sharing works →
AFDSI-ANALYSIS-18551There are more related species. Open the species tree to see them all.
ChEMBL: CECROPIN A (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; ED50 0.3 uMAFDSI-METABOLOMICS-2509
MegaSSR — ssr_discovery
derived from genome record AFDSI-SEQ-6416
File: GCF_002917195.1_megassr_results.tar.gz
Tool version: MegaSSR v3.0.0 (UM6P patched)
Native — captured by Northern-MA-UM6P-8787752738 · View at source ↗
cc_by public Country of origin not recorded: see how benefit-sharing works →
AFDSI-ANALYSIS-18550MegaSSR — ssr_discovery
derived from genome record AFDSI-SEQ-6419
File: GCF_002917175.1_megassr_results.tar.gz
Tool version: MegaSSR v3.0.0 (UM6P patched)
Native — captured by Northern-MA-UM6P-8787752738 · View at source ↗
cc_by public Country of origin not recorded: see how benefit-sharing works →
AFDSI-ANALYSIS-18549MegaSSR — ssr_discovery
derived from genome record AFDSI-SEQ-6066
File: GCF_002917155.1_megassr_results.tar.gz
Tool version: MegaSSR v3.0.0 (UM6P patched)
Native — captured by Northern-MA-UM6P-8787752738 · View at source ↗
cc_by public Country of origin not recorded: see how benefit-sharing works →
AFDSI-ANALYSIS-18548