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Benefit-sharing from DSI rests on the provider country's national framework. Where it requires bilateral benefit-sharing for DSI, those terms apply. Where it gives effect to the CBD multilateral mechanism, users of its publicly available DSI should share benefits through it: all users non-monetary benefits, as appropriate, and commercial users above set size thresholds also monetary contributions to the Cali Fund. Where it is silent on DSI, the position is not yet settled: check with the country's competent national authority, through the ABS service. Any terms agreed when the genetic resources were accessed still apply. Access and benefit-sharing questions are handled by the ABS service, not by the DataBank. Learn more →
taxon 1812935Also known as: Enterobacter cloacae complex 'Hoffmann cluster IV'
No local or indigenous names recorded yet.
Not yet assessed
Occurrence records: Recorded mostly outside Africa. 57 of 611 GBIF records (9%) are from Africa (checked 10/12/2026). A hint from GBIF and the genomes on this Hub, not an assessment: GBIF includes zoo and travel records.
Species that share this one's nearest groups in NCBI Taxonomy. This is how they're classified, not a phylogeny. See it in the species tree.
Origin: hub
31 downloads
First synced: 10/11/2026 · Last updated: 10/12/2026
Source: NCBI GCF_053891555.1 · View at source ↗
Download annotation (GFF3) · Download CDS (FASTA) · Download proteins (FASTA)
Collection: Mauritius
Sequencing: Illumina MiSeq · shovill v. 1.1.0 · 75x coverage
Released: 2025-12-09 · Submitted by: University of Patras
publiccc0AFDSI-SEQ-5961 Benefit-sharing under CBD Decision 16/2 and national frameworks →Country of origin: MU · PIC: unknown · MAT: unknown
GoaT: no record for this species (not eukaryotic, or not yet sequenced)
Publicly accessible — no request needed.
cysG_2 — 452 aa
tesB — 286 aa
cysG_1 — 457 aa
tesA — 189 aa
fadB — 729 aa
murE — 495 aa
metL — 810 aa
yaiE — 95 aa
putA — 1320 aa
hldE — 476 aa
Origin: hub
31 downloads
First synced: 10/11/2026 · Last updated: 10/12/2026
Source: NCBI GCF_053891575.1 · View at source ↗
Download annotation (GFF3) · Download CDS (FASTA) · Download proteins (FASTA)
Collection: Mauritius
Sequencing: Illumina MiSeq; Oxford Nanopore MinION · Flye v. 2.9.2 · 150x coverage
Released: 2025-12-09 · Submitted by: University of Patras
publiccc0AFDSI-SEQ-5962 Benefit-sharing under CBD Decision 16/2 and national frameworks →Country of origin: MU · PIC: unknown · MAT: unknown
GoaT: no record for this species (not eukaryotic, or not yet sequenced)
Publicly accessible — no request needed.
Origin: hub
33 downloads
First synced: 10/11/2026 · Last updated: 10/12/2026
Source: NCBI GCF_025535515.1 · View at source ↗
Download annotation (GFF3) · Download CDS (FASTA) · Download proteins (FASTA)
Collection: Senegal: Niokolo-Koba National Park
Sequencing: Illumina MiSeq · SPAdes v. 3.12.0+galaxy1 · 57x coverage
Released: 2022-10-03 · Submitted by: IHU Mediterranee Infection
publiccc0AFDSI-SEQ-5963 Benefit-sharing under CBD Decision 16/2 and national frameworks →Country of origin: SN · PIC: unknown · MAT: unknown
GoaT: no record for this species (not eukaryotic, or not yet sequenced)
Publicly accessible — no request needed.
Origin: hub
33 downloads
First synced: 10/11/2026 · Last updated: 10/12/2026
Source: NCBI GCF_025536035.1 · View at source ↗
Download annotation (GFF3) · Download CDS (FASTA) · Download proteins (FASTA)
Collection: Senegal: Niokolo-Koba National Park
Sequencing: Illumina MiSeq · SPAdes v. 3.12.0+galaxy1 · 72x coverage
Released: 2022-10-03 · Submitted by: IHU Mediterranee Infection
publiccc0AFDSI-SEQ-5964 Benefit-sharing under CBD Decision 16/2 and national frameworks →Country of origin: SN · PIC: unknown · MAT: unknown
GoaT: no record for this species (not eukaryotic, or not yet sequenced)
Publicly accessible — no request needed.
Origin: hub
32 downloads
First synced: 10/11/2026 · Last updated: 10/12/2026
Source: NCBI GCF_054381715.1 · View at source ↗
Download annotation (GFF3) · Download CDS (FASTA) · Download proteins (FASTA)
Collection: South Africa:Pretoria
Sequencing: Illumina MiSeq · Unicycler v. 0.4.9 · 56x coverage
Released: 2026-01-06 · Submitted by: Zurich University of Applied Sciences (ZHAW)
publiccc0AFDSI-SEQ-6232 Benefit-sharing under CBD Decision 16/2 and national frameworks →Country of origin: ZA · PIC: unknown · MAT: unknown
GoaT: no record for this species (not eukaryotic, or not yet sequenced)
Publicly accessible — no request needed.
AlphaFold DB proteome: UP000077063 ↗
PRIDE — project-level reference (metadata only; no per-protein identifications are available via PRIDE's public API)
pLDDT confidence: 88.9
Auto-synced from AlphaFold DB AF-A0ABD7KKB4-F1 · View at source ↗
publiccc_byAFDSI-STRUCT-16197-V2pLDDT confidence: 95.2
Auto-synced from AlphaFold DB AF-A0ABD7KIT7-F1 · View at source ↗
publiccc_byAFDSI-STRUCT-16167-V2pLDDT confidence: 96.2
Auto-synced from AlphaFold DB AF-V3DS12-F1 · View at source ↗
publiccc_byAFDSI-STRUCT-16199-V2pLDDT confidence: 93.8
Auto-synced from AlphaFold DB AF-A0A0F0XLC7-F1 · View at source ↗
publiccc_byAFDSI-STRUCT-16179-V2pLDDT confidence: 92.7
Auto-synced from AlphaFold DB AF-A0A0F0S056-F1 · View at source ↗
publiccc_byAFDSI-STRUCT-16201-V2BioImage Archive: Holotomographic datasets in OME-Zarr format for compression benchmarking of holotomographic data (View on source archive ↗)AFDSI-CELL-3201
BioImage Archive: Holotomographic datasets in OME-Zarr format for compression benchmarking of holotomographic data (View on source archive ↗)AFDSI-CELL-3202
57 real GBIF-recorded occurrences across Africa — see this species on GBIF ↗.
This reflects real occurrence records submitted to GBIF, not a comprehensive range map — sampling effort varies significantly by country and region, so an absence here doesn't mean the species isn't present.
A node's own derived bioinformatics-analysis output (e.g. an SSR/microsatellite discovery archive) run against this species' own genome data — see the Derived Analysis page for the full catalog.
MegaSSR — ssr_discovery
derived from genome record AFDSI-SEQ-6232
File: GCF_054381715.1_megassr_results.tar.gz
Tool version: MegaSSR v3.0.0 (UM6P patched)
Native — captured by Northern-MA-UM6P-8787752738 · View at source ↗
cc_by public Country of origin not recorded: see how benefit-sharing works →
AFDSI-ANALYSIS-20525MegaSSR — ssr_discovery
derived from genome record AFDSI-SEQ-5962
File: GCF_053891575.1_megassr_results.tar.gz
Tool version: MegaSSR v3.0.0 (UM6P patched)
Native — captured by Northern-MA-UM6P-8787752738 · View at source ↗
cc_by public Country of origin not recorded: see how benefit-sharing works →
AFDSI-ANALYSIS-20507There are more related species. Open the species tree to see them all.
MegaSSR — ssr_discovery
derived from genome record AFDSI-SEQ-5961
File: GCF_053891555.1_megassr_results.tar.gz
Tool version: MegaSSR v3.0.0 (UM6P patched)
Native — captured by Northern-MA-UM6P-8787752738 · View at source ↗
cc_by public Country of origin not recorded: see how benefit-sharing works →
AFDSI-ANALYSIS-20506MegaSSR — ssr_discovery
derived from genome record AFDSI-SEQ-5964
File: GCF_025536035.1_megassr_results.tar.gz
Tool version: MegaSSR v3.0.0 (UM6P patched)
Native — captured by Northern-MA-UM6P-8787752738 · View at source ↗
cc_by public Country of origin not recorded: see how benefit-sharing works →
AFDSI-ANALYSIS-19456MegaSSR — ssr_discovery
derived from genome record AFDSI-SEQ-5963
File: GCF_025535515.1_megassr_results.tar.gz
Tool version: MegaSSR v3.0.0 (UM6P patched)
Native — captured by Northern-MA-UM6P-8787752738 · View at source ↗
cc_by public Country of origin not recorded: see how benefit-sharing works →
AFDSI-ANALYSIS-19439