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Benefit-sharing from DSI rests on the provider country's national framework. Where it requires bilateral benefit-sharing for DSI, those terms apply. Where it gives effect to the CBD multilateral mechanism, users of its publicly available DSI should share benefits through it: all users non-monetary benefits, as appropriate, and commercial users above set size thresholds also monetary contributions to the Cali Fund. Where it is silent on DSI, the position is not yet settled: check with the country's competent national authority, through the ABS service. Any terms agreed when the genetic resources were accessed still apply. Access and benefit-sharing questions are handled by the ABS service, not by the DataBank. Learn more →
taxon 4793Also known as: Pythiacystis citrophthora
No local or indigenous names recorded yet.
Not yet assessed
Occurrence records: Recorded mostly outside Africa. 22 of 510 GBIF records (4%) are from Africa (checked 10/9/2026). A hint from GBIF and the genomes on this Hub, not an assessment: GBIF includes zoo and travel records.
Species that share this one's nearest groups in NCBI Taxonomy. This is how they're classified, not a phylogeny. See it in the species tree.
Origin: hub
55 downloads
First synced: 8/26/2026 · Last updated: 8/26/2026
Source: NCBI GCA_031305395.1 · View at source ↗
Download annotation (GFF3) · Download CDS (FASTA) · Download proteins (FASTA)
Collection: South Africa: Eastern Cape
Sequencing: PacBio Sequel II · Macrogen Genome Assembly application v. JANUARY-2023 · 521x coverage
Released: 2023-09-14 · Submitted by: Stellenbosch University
publiccc0AFDSI-SEQ-188 Benefit-sharing under CBD Decision 16/2 and national frameworks →Country of origin: ZA · PIC: unknown · MAT: unknown
GoaT: Scaffold assembly · 0.05 Gb · scaffold N50 908,581 · View at source ↗
Publicly accessible — no request needed.
protein 2628 — 1547 aa
protein 2629 — 169 aa
protein 2630 — 3037 aa
KATNA1 — 2067 aa
protein 2632 — 450 aa
protein 2633 — 741 aa
protein 2634 — 250 aa
protein 2635 — 535 aa
protein 2636 — 314 aa
protein 2637 — 190 aa
Origin: hub
0 downloads
First synced: 8/26/2026 · Last updated: 8/26/2026
Source: NCBI DQ821144.1 · View at source ↗
Released: 2006-12-30
publiccc0AFDSI-SEQ-650 Country of origin not recorded: see how benefit-sharing works →Publicly accessible — no request needed.
AlphaFold DB proteome: UP001259832 ↗
ChEMBL rows are compounds active against a protein target from this organism — not confirmed as compounds the species itself produces, unlike ANPDB's.
ChEMBL: SPHINXOLIDE (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; IC90 2.0 ppmAFDSI-METABOLOMICS-676
ChEMBL: SPHINXOLIDE B (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; IC90 2.0 ppmAFDSI-METABOLOMICS-677
ChEMBL: SPHINXOLIDE C (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; IC90 2.0 ppmAFDSI-METABOLOMICS-678
ChEMBL: NEOSIPHONIAMOLIDE A (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; IC90 5.0 ppmAFDSI-METABOLOMICS-679
ChEMBL: BENOMYL (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; IZ 44.33 mmAFDSI-METABOLOMICS-680
ChEMBL: CHEMBL2160186 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; ActivityAFDSI-METABOLOMICS-681
ChEMBL: CHEMBL2160182 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; ActivityAFDSI-METABOLOMICS-682
ChEMBL: CHEMBL2160181 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; ActivityAFDSI-METABOLOMICS-683
ChEMBL: CHEMBL2160174 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; Activity
pLDDT confidence: 92.3
Auto-synced from AlphaFold DB AF-A0AAD9GZB6-F1 · View at source ↗
publiccc_byAFDSI-STRUCT-12191-V2pLDDT confidence: 73.1
Auto-synced from AlphaFold DB AF-A0AAD9GU92-F1 · View at source ↗
publiccc_byAFDSI-STRUCT-13731-V2pLDDT confidence: 74.1
Auto-synced from AlphaFold DB AF-A0AAD9LNW4-F1 · View at source ↗
publiccc_byAFDSI-STRUCT-12187-V2pLDDT confidence: 63.6
Auto-synced from AlphaFold DB AF-A0AAD9GUS5-F1 · View at source ↗
publiccc_byAFDSI-STRUCT-13733-V2pLDDT confidence: 90.2
Auto-synced from AlphaFold DB AF-A0AAD9LE23-F1 · View at source ↗
publiccc_byAFDSI-STRUCT-12185-V2BioImage Archive: Microtubules in the coenocyte Phytophthora function in nuclear positioning and sustaining tip growth (View on source archive ↗)AFDSI-CELL-591
22 real GBIF-recorded occurrences across Africa — see this species on GBIF ↗.
This reflects real occurrence records submitted to GBIF, not a comprehensive range map — sampling effort varies significantly by country and region, so an absence here doesn't mean the species isn't present.
A node's own derived bioinformatics-analysis output (e.g. an SSR/microsatellite discovery archive) run against this species' own genome data — see the Derived Analysis page for the full catalog.
MegaSSR — ssr_discovery
derived from genome record AFDSI-SEQ-188
File: GCA_031305395.1_megassr_results.tar.gz
Tool version: MegaSSR v3.0.0 (UM6P patched)
Native — captured by Northern-MA-UM6P-8787752738 · View at source ↗
cc_by public Country of origin not recorded: see how benefit-sharing works →
AFDSI-ANALYSIS-16847ChEMBL: CHEMBL2160185 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; ActivityAFDSI-METABOLOMICS-685