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Benefit-sharing from DSI rests on the provider country's national framework. Where it requires bilateral benefit-sharing for DSI, those terms apply. Where it gives effect to the CBD multilateral mechanism, users of its publicly available DSI should share benefits through it: all users non-monetary benefits, as appropriate, and commercial users above set size thresholds also monetary contributions to the Cali Fund. Where it is silent on DSI, the position is not yet settled: check with the country's competent national authority, through the ABS service. Any terms agreed when the genetic resources were accessed still apply. Access and benefit-sharing questions are handled by the ABS service, not by the DataBank. Learn more →
taxon 4785Not yet assessed
Occurrence records: Recorded mostly outside Africa. 41 of 3,589 GBIF records (1%) are from Africa (checked 10/9/2026). A hint from GBIF and the genomes on this Hub, not an assessment: GBIF includes zoo and travel records.
Species that share this one's nearest groups in NCBI Taxonomy. This is how they're classified, not a phylogeny. See it in the species tree.
Origin: hub
88 downloads
First synced: 8/26/2026 · Last updated: 8/26/2026
Source: NCBI GCA_018691715.1 · View at source ↗
Download annotation (GFF3) · Download CDS (FASTA) · Download proteins (FASTA)
Collection: South Africa: Pretoria
Sequencing: Oxford Nanopore MinION; Illumina HiSeq · SmartDenovo v. Dec 2018 · 100x coverage
Released: 2021-06-03 · Submitted by: University of Pretoria
publiccc0AFDSI-SEQ-90 Benefit-sharing under CBD Decision 16/2 and national frameworks →Country of origin: ZA · PIC: unknown · MAT: unknown
GoaT: Scaffold assembly · 0.05 Gb · scaffold N50 24,869 · BUSCO 92.4% complete · View at source ↗
Publicly accessible — no request needed.
protein 5047 — 444 aa
protein 5048 — 98 aa
NPP1 — 256 aa
Origin: hub
0 downloads
First synced: 8/26/2026 · Last updated: 8/26/2026
Source: NCBI XM_067944018.1 · View at source ↗
Collection: South Africa: Pretoria
Released: 2024-08-29
publiccc0AFDSI-SEQ-649 Benefit-sharing under CBD Decision 16/2 and national frameworks →Country of origin: ZA · PIC: unknown · MAT: unknown
Publicly accessible — no request needed.
Origin: hub
44 downloads
First synced: 9/1/2026 · Last updated: 9/1/2026
Source: NCBI GCF_018691715.1 · View at source ↗
Download annotation (GFF3) · Download CDS (FASTA) · Download proteins (FASTA)
Collection: South Africa: Pretoria
Sequencing: Oxford Nanopore MinION; Illumina HiSeq · SmartDenovo v. Dec 2018 · 100x coverage
Released: 2021-06-03 · Submitted by: University of Pretoria
publiccc0AFDSI-SEQ-940 Benefit-sharing under CBD Decision 16/2 and national frameworks →Country of origin: ZA · PIC: unknown · MAT: unknown
GoaT: Scaffold assembly · 0.11 Gb · scaffold N50 1,187,988 · View at source ↗
Publicly accessible — no request needed.
No AlphaFold DB proteome found for this species.
PRIDE — project-level reference (metadata only; no per-protein identifications are available via PRIDE's public API)
Phosphite Inhibits Phytophthora cinnamomi by Downregulating Oxidoreductases and Disrupting Energy Metabolism (PXD063718) ↗AFDSI-PROJREF-252
Proteomic and Metabolomic study of the Quercus ilex response to Phytophthora cinnamomi, the main causal agent of the decline syndrome, and the identification of putative markers of resistance (PXD046909) ↗AFDSI-PROJREF-253
Targeted delivery of tumor necrosis factor in combination with lomustine induces a T-cell dependent regression of glioblastoma (PXD041234) ↗AFDSI-PROJREF-254
Differences in the proteomic and metabolomic response during the early stages of Phytophthora cinnamomi infection of two Quercus species with contrasting degrees of susceptibility. (PXD033162) ↗AFDSI-PROJREF-255
Proteomic response to drought and Phytophthora cinnamomi in Quercus ilex. (PXD025704) ↗AFDSI-PROJREF-256
Integrated proteomic and metabolomic profiling of Phytophthora cinnamomi attack on sweet chestnut (Castanea sativa) reveals distinct molecular reprogramming proximal to the infection site and away from it (PXD022381) ↗AFDSI-PROJREF-257
Disclosing proteins in cork oak plants associated with the immune response to P. cinnamomi inoculation in a long-term assay (PXD021455) ↗AFDSI-PROJREF-258
ChEMBL rows are compounds active against a protein target from this organism — not confirmed as compounds the species itself produces, unlike ANPDB's.
ChEMBL: SPHINXOLIDE (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; IC90 2.0 ppmAFDSI-METABOLOMICS-668
ChEMBL: SPHINXOLIDE B (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; IC90 2.0 ppmAFDSI-METABOLOMICS-669
ChEMBL: SPHINXOLIDE C (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; IC90 2.0 ppmAFDSI-METABOLOMICS-670
ChEMBL: NEOSIPHONIAMOLIDE A (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; IC90 5.0 ppmAFDSI-METABOLOMICS-671
ChEMBL: CHEMBL464544 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; ActivityAFDSI-METABOLOMICS-672
ChEMBL: TERRECYCLIC ACID A (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; ActivityAFDSI-METABOLOMICS-673
ChEMBL: CHEMBL467402 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; Activity 37.0 mm2AFDSI-METABOLOMICS-674
ChEMBL: HARZIANOLIDE (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; GI 25.0 %AFDSI-METABOLOMICS-675
pLDDT confidence: unknown
Auto-synced from PDBe 2aib · View at source ↗
publiccc_byAFDSI-STRUCT-5621-V2pLDDT confidence: 90.8
Auto-synced from AlphaFold DB AF-O59837-F1 · View at source ↗
publiccc_byAFDSI-STRUCT-5581-V1pLDDT confidence: 96.5
Auto-synced from AlphaFold DB AF-P15569-F1 · View at source ↗
publiccc_byAFDSI-STRUCT-5582-V1pLDDT confidence: 83.1
Auto-synced from AlphaFold DB AF-B0B0Q6-F1 · View at source ↗
publiccc_byAFDSI-STRUCT-5583-V1BioImage Archive: Microtubules in the coenocyte Phytophthora function in nuclear positioning and sustaining tip growth (View on source archive ↗)AFDSI-CELL-590
41 real GBIF-recorded occurrences across Africa — see this species on GBIF ↗.
This reflects real occurrence records submitted to GBIF, not a comprehensive range map — sampling effort varies significantly by country and region, so an absence here doesn't mean the species isn't present.
A node's own derived bioinformatics-analysis output (e.g. an SSR/microsatellite discovery archive) run against this species' own genome data — see the Derived Analysis page for the full catalog.
MegaSSR — ssr_discovery
derived from genome record AFDSI-SEQ-940
File: GCF_018691715.1_megassr_results.tar.gz
Tool version: MegaSSR v3.0.0 (UM6P patched)
Native — captured by Northern-MA-UM6P-8787752738 · View at source ↗
cc_by public Country of origin not recorded: see how benefit-sharing works →
AFDSI-ANALYSIS-19133MegaSSR — ssr_discovery
derived from genome record AFDSI-SEQ-90
File: GCA_018691715.1_megassr_results.tar.gz
Tool version: MegaSSR v3.0.0 (UM6P patched)
Native — captured by Northern-MA-UM6P-8787752738 · View at source ↗
cc_by public Country of origin not recorded: see how benefit-sharing works →
AFDSI-ANALYSIS-16396