Microchloropsis gaditana

taxon 72520

Also known as: Nannochloropsis gaditana, Nannochloropsis gaditana CCMP526

Indigenous / local names

No local or indigenous names recorded yet.

Genome browser

Sequence records

genome (fasta)

mirrored

Origin: hub

51 downloads

First synced: 9/1/2026 · Last updated: 9/1/2026

Source: NCBI GCA_000240725.1 · View at source ↗

Download annotation (GFF3) · Download CDS (FASTA) · Download proteins (FASTA)

Sequencing: 454 GS FLX Titanium; Illumina GA IIx · Newbler v. 2.3; Velvet v. 1.0.19 · 230x coverage

publiccc0AFDSI-SEQ-707

GoaT: Scaffold assembly · 0.03 Gb · scaffold N50 37,643 · View at source ↗

Publicly accessible — no request needed.

genome (fasta)

mirrored

Origin: hub

53 downloads

First synced: 9/1/2026 · Last updated: 9/1/2026

Source: NCBI GCF_000240725.1 · View at source ↗

Download annotation (GFF3) · Download CDS (FASTA) · Download proteins (FASTA)

Sequencing: 454 GS FLX Titanium; Illumina GA IIx · Newbler v. 2.3; Velvet v. 1.0.19 · 230x coverage

publiccc0AFDSI-SEQ-708

GoaT: Scaffold assembly · 0.03 Gb · scaffold N50 37,643 · View at source ↗

Publicly accessible — no request needed.

transcriptome (fasta)

mirrored

Origin: hub

0 downloads

First synced: 9/2/2026 · Last updated: 9/2/2026

Source: NCBI XM_005856190.2 · View at source ↗

Released: 2013-10-25

publiccc0AFDSI-SEQ-983

Publicly accessible — no request needed.

No AlphaFold DB proteome found for this species.

Proteomics (external sources)

PRIDE — project-level reference (metadata only; no per-protein identifications are available via PRIDE's public API)

A Data-Independent-Acquisition-based proteomic approach towards understanding the acclimation strategy of Microchloropsis gaditana CCMP526 in hypersaline conditions (PXD017297) ↗AFDSI-PROJREF-411

A Data-Independent-Acquisition-based proteomic approach towards understanding the acclimation strategy of Microchloropsis gaditana CCMP526 in hypersaline conditions (PXD017164) ↗AFDSI-PROJREF-412

Metabolic Profiles (external sources)

KEGG: KEGG genome-based metabolic profile (ngd) (View at source ↗) — Genome-based pathway inference (KEGG) — reflects which metabolic pathways this species' annotated genes place it in, not experimentally measured metabolite presenceAFDSI-METABPROF-159

Geographic range (Africa)

1 real GBIF-recorded occurrence across Africa — see this species on GBIF ↗.

This reflects real occurrence records submitted to GBIF, not a comprehensive range map — sampling effort varies significantly by country and region, so an absence here doesn't mean the species isn't present.