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Benefit-sharing from DSI rests on the provider country's national framework. Where it requires bilateral benefit-sharing for DSI, those terms apply. Where it gives effect to the CBD multilateral mechanism, users of its publicly available DSI should share benefits through it: all users non-monetary benefits, as appropriate, and commercial users above set size thresholds also monetary contributions to the Cali Fund. Where it is silent on DSI, the position is not yet settled: check with the country's competent national authority, through the ABS service. Any terms agreed when the genetic resources were accessed still apply. Access and benefit-sharing questions are handled by the ABS service, not by the DataBank. Learn more →
grain amaranth
taxon 28502Also known as: Amaranthus hybridus var. erythrostachys Moq., 1849, Amaranthus hypocondriacus
No local or indigenous names recorded yet.
Not yet assessed
Occurrence records: Recorded mostly outside Africa. 96 of 7,245 GBIF records (1%) are from Africa (checked 10/9/2026). A hint from GBIF and the genomes on this Hub, not an assessment: GBIF includes zoo and travel records.
Species that share this one's nearest groups in NCBI Taxonomy. This is how they're classified, not a phylogeny. See it in the species tree.
Origin: hub
0 downloads
First synced: 8/26/2026 · Last updated: 8/26/2026
Source: NCBI GCA_051912135.1 · View at source ↗
Collection: Tanzania
Sequencing: Pacbio HiFi · HiFiasm v. v0.8-r279 · 26.9x coverage
Released: 2025-08-11 · Submitted by: University of York
publiccc0AFDSI-SEQ-357 Benefit-sharing under CBD Decision 16/2 and national frameworks →Country of origin: TZ · PIC: unknown · MAT: unknown
GoaT: Chromosome assembly · 0.43 Gb · scaffold N50 25,996,252 · 16 chromosomes · View at source ↗
Publicly accessible — no request needed.
protein 3971 — 964 aa
rbcL — 475 aa
BADH4 — 501 aa
protein 3974 — 623 aa
RBCS1 — 183 aa
RBCS3 — 180 aa
RBCS2 — 184 aa
AAI — 32 aa
protein 3979 — 94 aa
Origin: hub
22 downloads
First synced: 8/26/2026 · Last updated: 8/26/2026
Source: ENA AF150665 · View at source ↗
Download CDS (FASTA) · Download proteins (FASTA)
Released: 1999-06-07
publiccc0AFDSI-SEQ-545 Country of origin not recorded: see how benefit-sharing works →Publicly accessible — no request needed.
No AlphaFold DB proteome found for this species.
PRIDE — project-level reference (metadata only; no per-protein identifications are available via PRIDE's public API)
Amaranthus hypochondriacus seeds as a rich source of cysteine rich bioactive peptides (PXD025965) ↗AFDSI-PROJREF-80
ChEMBL rows are compounds active against a protein target from this organism — not confirmed as compounds the species itself produces, unlike ANPDB's.
ChEMBL: LECANORIN (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; IC50 580000.0 nMAFDSI-METABOLOMICS-562
ChEMBL: 2,4-DICHLOROPHENOXYACETIC ACID (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; IC50 180000.0 nMAFDSI-METABOLOMICS-563
ChEMBL: ORCINOL (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; IC50 1000000.0 nMAFDSI-METABOLOMICS-564
ChEMBL: METHYL ORSELLINATE (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; IC50 290000.0 nMAFDSI-METABOLOMICS-565
ChEMBL: LICHEXANTHONE (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; IC50 2000000.0 nMAFDSI-METABOLOMICS-566
ChEMBL: ATRARIC ACID (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; IC50 320000.0 nMAFDSI-METABOLOMICS-567
ChEMBL: METHYL HAEMATOMMATE (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; IC50 21000.0 nMAFDSI-METABOLOMICS-568
ChEMBL: GYROPHORIC ACID (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; IC50 200000.0 nMAFDSI-METABOLOMICS-569
MetaboLights: Nutritional quality and genetic differences of five amaranth cultivars revealed by metabolome profiling and whole-genome sequencing (Seed assays) (View at source ↗)AFDSI-METABPROF-22
MetaboLights: Nutritional quality and genetic differences of five amaranth cultivars revealed by metabolome profiling and whole-genome sequencing (Leaf assays) (View at source ↗)AFDSI-METABPROF-23
pLDDT confidence: 90.6
Auto-synced from AlphaFold DB AF-P80403-F1 · View at source ↗
publiccc_byAFDSI-STRUCT-4529-V2pLDDT confidence: 97.1
Auto-synced from AlphaFold DB AF-P16306-F1 · View at source ↗
publiccc_byAFDSI-STRUCT-4522-V1pLDDT confidence: 97.9
Auto-synced from AlphaFold DB AF-O04895-F1 · View at source ↗
publiccc_byAFDSI-STRUCT-4523-V1pLDDT confidence: 90.9
Auto-synced from AlphaFold DB AF-P37224-F1 · View at source ↗
publiccc_byAFDSI-STRUCT-4524-V1pLDDT confidence: 81.7
Auto-synced from AlphaFold DB AF-Q42516-F1 · View at source ↗
publiccc_byAFDSI-STRUCT-4525-V1herbarium at Burundi · Source: GBIF 5831987528 (View at source ↗)AFDSI-IMG-900
herbarium at Uganda · Source: GBIF 5831966968 (View at source ↗)AFDSI-IMG-925
herbarium at Kenya · Source: GBIF 5831970137 (View at source ↗)AFDSI-IMG-927
herbarium at Ethiopia · Source: GBIF 5832088813 (View at source ↗)AFDSI-IMG-928
herbarium at Ethiopia · Source: GBIF 5832039411 (View at source ↗)AFDSI-IMG-929
herbarium at Kenya · Source: GBIF 5085157620 (View at source ↗)AFDSI-IMG-931
herbarium at Morocco · Source: GBIF 5832048723 (View at source ↗)AFDSI-IMG-893
herbarium at Morocco · Source: GBIF 1936408372 (View at source ↗)AFDSI-IMG-896
herbarium at Morocco · Source: GBIF 1936408315 (View at source ↗)AFDSI-IMG-898
herbarium at Malawi · Source: GBIF 5831975510 (View at source ↗)AFDSI-IMG-899
177 real GBIF-recorded occurrences across Africa — see this species on GBIF ↗.
This reflects real occurrence records submitted to GBIF, not a comprehensive range map — sampling effort varies significantly by country and region, so an absence here doesn't mean the species isn't present.
A node's own derived bioinformatics-analysis output (e.g. an SSR/microsatellite discovery archive) run against this species' own genome data — see the Derived Analysis page for the full catalog.
PlantLAI — ltr_assembly_index
derived from genome record AFDSI-SEQ-357
File: GCA_051912135.1_plantlai_results.tar.gz
Tool version: PlantLAI web pipeline (MegaLAI.sh -A 4; LTR_retriever v2.9.0)
Native — captured by Northern-MA-UM6P-8787752738 · View at source ↗
cc_by public Country of origin not recorded: see how benefit-sharing works →
AFDSI-ANALYSIS-21286MegaSSR — ssr_discovery
derived from genome record AFDSI-SEQ-357
File: GCA_051912135.1_megassr_results.tar.gz
Tool version: MegaSSR v3.0.0 (UM6P web pipeline)
Native — captured by Northern-MA-UM6P-8787752738 · View at source ↗
cc_by public Country of origin not recorded: see how benefit-sharing works →
AFDSI-ANALYSIS-20988There are more related species. Open the species tree to see them all.