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Benefit-sharing from DSI rests on the provider country's national framework. Where it requires bilateral benefit-sharing for DSI, those terms apply. Where it gives effect to the CBD multilateral mechanism, users of its publicly available DSI should share benefits through it: all users non-monetary benefits, as appropriate, and commercial users above set size thresholds also monetary contributions to the Cali Fund. Where it is silent on DSI, the position is not yet settled: check with the country's competent national authority, through the ABS service. Any terms agreed when the genetic resources were accessed still apply. Access and benefit-sharing questions are handled by the ABS service, not by the DataBank. Learn more →
taxon 244366Also known as: Klebsiella singaporensis
No local or indigenous names recorded yet.
Cosmopolitan
Occurrence records: Recorded mostly outside Africa. 61 of 1,322 GBIF records (5%) are from Africa (checked 10/12/2026). A hint from GBIF and the genomes on this Hub, not an assessment: GBIF includes zoo and travel records.
Species that share this one's nearest groups in NCBI Taxonomy. This is how they're classified, not a phylogeny. See it in the species tree.
Origin: hub
32 downloads
First synced: 10/11/2026 · Last updated: 10/12/2026
Source: NCBI GCF_029001955.1 · View at source ↗
Download annotation (GFF3) · Download CDS (FASTA) · Download proteins (FASTA)
Collection: Egypt: New Valley, Kharga
Sequencing: Illumina MiSeq · Unicycler v. 0.4.8 · 70x coverage
Released: 2023-02-22 · Submitted by: msa univeristy
publiccc0AFDSI-SEQ-5657 Benefit-sharing under CBD Decision 16/2 and national frameworks →Country of origin: EG · PIC: unknown · MAT: unknown
GoaT: no record for this species (not eukaryotic, or not yet sequenced)
Publicly accessible — no request needed.
Origin: hub
31 downloads
First synced: 10/11/2026 · Last updated: 10/12/2026
Source: NCBI GCF_028801025.1 · View at source ↗
Download annotation (GFF3) · Download CDS (FASTA) · Download proteins (FASTA)
Collection: Egypt: Beni Suef, Naser
Sequencing: Illumina MiSeq · Unicycler v. 0.4.8 · 70x coverage
Released: 2023-02-22 · Submitted by: msa univeristy
publiccc0AFDSI-SEQ-5658 Benefit-sharing under CBD Decision 16/2 and national frameworks →Country of origin: EG · PIC: unknown · MAT: unknown
GoaT: no record for this species (not eukaryotic, or not yet sequenced)
Publicly accessible — no request needed.
Origin: hub
32 downloads
First synced: 10/11/2026 · Last updated: 10/12/2026
Source: NCBI GCF_029001995.1 · View at source ↗
Download annotation (GFF3) · Download CDS (FASTA) · Download proteins (FASTA)
Collection: Egypt: Minya, Mallawi
Sequencing: Illumina MiSeq · Unicycler v. 0.4.8 · 70x coverage
Released: 2023-02-22 · Submitted by: msa univeristy
publiccc0AFDSI-SEQ-5659 Benefit-sharing under CBD Decision 16/2 and national frameworks →Country of origin: EG · PIC: unknown · MAT: unknown
GoaT: no record for this species (not eukaryotic, or not yet sequenced)
Publicly accessible — no request needed.
Origin: hub
32 downloads
First synced: 10/11/2026 · Last updated: 10/12/2026
Source: NCBI GCF_029001975.1 · View at source ↗
Download annotation (GFF3) · Download CDS (FASTA) · Download proteins (FASTA)
Collection: Egypt: Assuit, Dayrout
Sequencing: Illumina MiSeq · Unicycler v. 0.4.8 · 70x coverage
Released: 2023-02-22 · Submitted by: msa univeristy
publiccc0AFDSI-SEQ-5660 Benefit-sharing under CBD Decision 16/2 and national frameworks →Country of origin: EG · PIC: unknown · MAT: unknown
GoaT: no record for this species (not eukaryotic, or not yet sequenced)
Publicly accessible — no request needed.
Origin: hub
32 downloads
First synced: 10/11/2026 · Last updated: 10/12/2026
Source: NCBI GCA_044039925.1 · View at source ↗
Download annotation (GFF3) · Download CDS (FASTA) · Download proteins (FASTA)
Collection: Egypt
Sequencing: ILLUMINA · SKESA v. 2.2 · 164x coverage
Released: 2024-10-29 · Submitted by: National Center for Biotechnology Information
publiccc0AFDSI-SEQ-5880 Benefit-sharing under CBD Decision 16/2 and national frameworks →Country of origin: EG · PIC: unknown · MAT: unknown
GoaT: no record for this species (not eukaryotic, or not yet sequenced)
Publicly accessible — no request needed.
Origin: hub
32 downloads
First synced: 10/11/2026 · Last updated: 10/12/2026
Source: NCBI GCA_044040015.1 · View at source ↗
Download annotation (GFF3) · Download CDS (FASTA) · Download proteins (FASTA)
Collection: Egypt
Sequencing: ILLUMINA · SKESA v. 2.2 · 28x coverage
Released: 2024-10-29 · Submitted by: National Center for Biotechnology Information
publiccc0AFDSI-SEQ-5882 Benefit-sharing under CBD Decision 16/2 and national frameworks →Country of origin: EG · PIC: unknown · MAT: unknown
GoaT: no record for this species (not eukaryotic, or not yet sequenced)
Publicly accessible — no request needed.
Origin: hub
31 downloads
First synced: 10/11/2026 · Last updated: 10/12/2026
Source: NCBI GCF_021533725.1 · View at source ↗
Download annotation (GFF3) · Download CDS (FASTA) · Download proteins (FASTA)
Collection: Nigeria
Sequencing: Illumina MiSeq · Velvet v. 1.1.04 · 82x coverage
Released: 2022-01-20 · Submitted by: Igbinedion University Okada Edo state Nigeria
publiccc0AFDSI-SEQ-6013 Benefit-sharing under CBD Decision 16/2 and national frameworks →Country of origin: NG · PIC: unknown · MAT: unknown
GoaT: no record for this species (not eukaryotic, or not yet sequenced)
Publicly accessible — no request needed.
Origin: hub
31 downloads
First synced: 10/11/2026 · Last updated: 10/12/2026
Source: NCBI GCF_021533695.1 · View at source ↗
Download annotation (GFF3) · Download CDS (FASTA) · Download proteins (FASTA)
Collection: Nigeria
Sequencing: Illumina MiSeq · Velvet v. 1.1.04 · 86x coverage
Released: 2022-01-20 · Submitted by: Igbinedion University Okada Edo state Nigeria
publiccc0AFDSI-SEQ-6014 Benefit-sharing under CBD Decision 16/2 and national frameworks →Country of origin: NG · PIC: unknown · MAT: unknown
GoaT: no record for this species (not eukaryotic, or not yet sequenced)
Publicly accessible — no request needed.
Origin: hub
31 downloads
First synced: 10/11/2026 · Last updated: 10/12/2026
Source: NCBI GCF_037937175.1 · View at source ↗
Download annotation (GFF3) · Download CDS (FASTA) · Download proteins (FASTA)
Collection: South Africa: Potchefstroom
Sequencing: MGI · MEAGHIT v. 1.2.9 · 45x coverage
Released: 2024-04-02 · Submitted by: North West University
publiccc0AFDSI-SEQ-6016 Benefit-sharing under CBD Decision 16/2 and national frameworks →Country of origin: ZA · PIC: unknown · MAT: unknown
GoaT: no record for this species (not eukaryotic, or not yet sequenced)
Publicly accessible — no request needed.
Origin: hub
32 downloads
First synced: 10/11/2026 · Last updated: 10/12/2026
Source: NCBI GCA_044321465.1 · View at source ↗
Download annotation (GFF3) · Download CDS (FASTA) · Download proteins (FASTA)
Collection: Egypt
Sequencing: ILLUMINA · SKESA v. 2.2 · 130x coverage
Released: 2024-11-03 · Submitted by: National Center for Biotechnology Information
publiccc0AFDSI-SEQ-6344 Benefit-sharing under CBD Decision 16/2 and national frameworks →Country of origin: EG · PIC: unknown · MAT: unknown
GoaT: no record for this species (not eukaryotic, or not yet sequenced)
Publicly accessible — no request needed.
Origin: hub
31 downloads
First synced: 10/11/2026 · Last updated: 10/12/2026
Source: NCBI GCF_028801015.1 · View at source ↗
Download annotation (GFF3) · Download CDS (FASTA) · Download proteins (FASTA)
Collection: Egypt: Beni Suef, Biba
Sequencing: Illumina MiSeq · Unicycler v. 0.4.8 · 70x coverage
Released: 2023-02-22 · Submitted by: msa univeristy
publiccc0AFDSI-SEQ-5656 Benefit-sharing under CBD Decision 16/2 and national frameworks →Country of origin: EG · PIC: unknown · MAT: unknown
GoaT: no record for this species (not eukaryotic, or not yet sequenced)
Publicly accessible — no request needed.
fadB — 729 aa
protein 13828 — 287 aa
protein 13829 — 207 aa
fadJ — 714 aa
pyrG — 545 aa
recB — 1178 aa
hflB — 644 aa
arnA — 661 aa
protein 13835 — 810 aa
coaBC — 404 aa
Origin: hub
31 downloads
First synced: 10/11/2026 · Last updated: 10/12/2026
Source: NCBI GCF_029002035.1 · View at source ↗
Download annotation (GFF3) · Download CDS (FASTA) · Download proteins (FASTA)
Collection: Egypt: Minya, Abu Qurqas
Sequencing: Illumina MiSeq · Unicycler v. 0.4.8 · 70x coverage
Released: 2023-02-22 · Submitted by: msa univeristy
publiccc0AFDSI-SEQ-5661 Benefit-sharing under CBD Decision 16/2 and national frameworks →Country of origin: EG · PIC: unknown · MAT: unknown
GoaT: no record for this species (not eukaryotic, or not yet sequenced)
Publicly accessible — no request needed.
Origin: hub
31 downloads
First synced: 10/11/2026 · Last updated: 10/12/2026
Source: NCBI GCA_044039945.1 · View at source ↗
Download annotation (GFF3) · Download CDS (FASTA) · Download proteins (FASTA)
Collection: Egypt
Sequencing: ILLUMINA · SKESA v. 2.2 · 133x coverage
Released: 2024-10-29 · Submitted by: National Center for Biotechnology Information
publiccc0AFDSI-SEQ-5881 Benefit-sharing under CBD Decision 16/2 and national frameworks →Country of origin: EG · PIC: unknown · MAT: unknown
GoaT: no record for this species (not eukaryotic, or not yet sequenced)
Publicly accessible — no request needed.
Origin: hub
31 downloads
First synced: 10/11/2026 · Last updated: 10/12/2026
Source: NCBI GCF_037937105.1 · View at source ↗
Download annotation (GFF3) · Download CDS (FASTA) · Download proteins (FASTA)
Collection: South Africa: Potchfstroom
Sequencing: MGI · MEGAHIT v. 1.2.9 · 45x coverage
Released: 2024-04-02 · Submitted by: North West University
publiccc0AFDSI-SEQ-6015 Benefit-sharing under CBD Decision 16/2 and national frameworks →Country of origin: ZA · PIC: unknown · MAT: unknown
GoaT: no record for this species (not eukaryotic, or not yet sequenced)
Publicly accessible — no request needed.
Origin: hub
0 downloads
First synced: 11/8/2026 · Last updated: 11/8/2026
Source: NCBI OX223228.1 · View at source ↗
Released: 2022-07-12
publiccc0AFDSI-SEQ-6540 Country of origin not recorded: see how benefit-sharing works →Publicly accessible — no request needed.
AlphaFold DB proteome: UP000031638 ↗
PRIDE — project-level reference (metadata only; no per-protein identifications are available via PRIDE's public API)
Basil essential oil modulates the stress response of Klebsiella variicola: A label-free proteomic study (PXD076253) ↗AFDSI-PROJREF-731
Bioplatforms Australia: Antibiotic Resistant Sepsis Pathogens Framework Initiative - Klebsiella pneumoniae complex (PXD020839) ↗AFDSI-PROJREF-733
Bioplatforms Australia: Antibiotic Resistant Sepsis Pathogens Framework Initiative - Klebsiella pneumoniae complex (PXD016672) ↗AFDSI-PROJREF-734
Widespread telomere bacteriophages equip their hosts with potent inter-bacterial weapons (PXD058604) ↗AFDSI-PROJREF-1063
Rapid detection of beta-lactam, aminoglycoside and fluoroquinolone resistance mechanisms in blood cultures positive for E. coli or K. pneumoniae using targeted LC-MS/MS (PXD025365) ↗AFDSI-PROJREF-1064
ChEMBL rows are compounds active against a protein target from this organism — not confirmed as compounds the species itself produces, unlike ANPDB's.
ChEMBL: CHEMBL382905 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; MIC 500000.0 nMAFDSI-METABOLOMICS-2054
ChEMBL: CHEMBL1814451 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; MIC 500000.0 nMAFDSI-METABOLOMICS-2055
ChEMBL: CHEMBL2288227 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; MIC 500000.0 nMAFDSI-METABOLOMICS-2056
ChEMBL: CHEMBL2288227 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; MIC 500000.0 nMAFDSI-METABOLOMICS-2057
BioImage Archive: Simple imaging system for label-free identification of bacterial pathogens in resource-limited settings (View on source archive ↗)AFDSI-CELL-4005
BioImage Archive: Simple imaging system for label-free identification of bacterial pathogens in resource-limited settings (View on source archive ↗)AFDSI-CELL-4004
BioImage Archive: A lipid biosynthesis node coordinates inducible spatial defense and enables metabolic preconditioning against biofilm infections (View on source archive ↗)AFDSI-CELL-4006
BioImage Archive: Deep learning recognises antibiotic modes of action from brightfield images (View on source archive ↗)AFDSI-CELL-4009
BioImage Archive: A lipid biosynthesis node coordinates inducible spatial defense and enables metabolic preconditioning against biofilm infections (View on source archive ↗)AFDSI-CELL-4007
BioImage Archive: Deep learning recognises antibiotic modes of action from brightfield images (View on source archive ↗)AFDSI-CELL-4008
BioImage Archive: ChemoTrack: A comprehensive dataset linking single-cell migration trajectories to precisely defined chemotactic signals (View on source archive ↗)AFDSI-CELL-4010
BioImage Archive: Holotomographic datasets in OME-Zarr format for compression benchmarking of holotomographic data (View on source archive ↗)AFDSI-CELL-4012
BioImage Archive: ChemoTrack: A comprehensive dataset linking single-cell migration trajectories to precisely defined chemotactic signals (View on source archive ↗)AFDSI-CELL-4011
BioImage Archive: Holotomographic datasets in OME-Zarr format for compression benchmarking of holotomographic data (View on source archive ↗)AFDSI-CELL-4013
64 real GBIF-recorded occurrences across Africa — see this species on GBIF ↗.
This reflects real occurrence records submitted to GBIF, not a comprehensive range map — sampling effort varies significantly by country and region, so an absence here doesn't mean the species isn't present.
A node's own derived bioinformatics-analysis output (e.g. an SSR/microsatellite discovery archive) run against this species' own genome data — see the Derived Analysis page for the full catalog.
MegaSSR — ssr_discovery
derived from genome record AFDSI-SEQ-6016
File: GCF_037937175.1_megassr_results.tar.gz
Tool version: MegaSSR v3.0.0 (UM6P patched)
Native — captured by Northern-MA-UM6P-8787752738 · View at source ↗
cc_by public Country of origin not recorded: see how benefit-sharing works →
AFDSI-ANALYSIS-19993MegaSSR — ssr_discovery
derived from genome record AFDSI-SEQ-6015
File: GCF_037937105.1_megassr_results.tar.gz
Tool version: MegaSSR v3.0.0 (UM6P patched)
Native — captured by Northern-MA-UM6P-8787752738 · View at source ↗
cc_by public Country of origin not recorded: see how benefit-sharing works →
AFDSI-ANALYSIS-19992There are more related species. Open the species tree to see them all.
MegaSSR — ssr_discovery
derived from genome record AFDSI-SEQ-5661
File: GCF_029002035.1_megassr_results.tar.gz
Tool version: MegaSSR v3.0.0 (UM6P patched)
Native — captured by Northern-MA-UM6P-8787752738 · View at source ↗
cc_by public Country of origin not recorded: see how benefit-sharing works →
AFDSI-ANALYSIS-19674MegaSSR — ssr_discovery
derived from genome record AFDSI-SEQ-5659
File: GCF_029001995.1_megassr_results.tar.gz
Tool version: MegaSSR v3.0.0 (UM6P patched)
Native — captured by Northern-MA-UM6P-8787752738 · View at source ↗
cc_by public Country of origin not recorded: see how benefit-sharing works →
AFDSI-ANALYSIS-19672MegaSSR — ssr_discovery
derived from genome record AFDSI-SEQ-5660
File: GCF_029001975.1_megassr_results.tar.gz
Tool version: MegaSSR v3.0.0 (UM6P patched)
Native — captured by Northern-MA-UM6P-8787752738 · View at source ↗
cc_by public Country of origin not recorded: see how benefit-sharing works →
AFDSI-ANALYSIS-19671