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Benefit-sharing from DSI rests on the provider country's national framework. Where it requires bilateral benefit-sharing for DSI, those terms apply. Where it gives effect to the CBD multilateral mechanism, users of its publicly available DSI should share benefits through it: all users non-monetary benefits, as appropriate, and commercial users above set size thresholds also monetary contributions to the Cali Fund. Where it is silent on DSI, the position is not yet settled: check with the country's competent national authority, through the ABS service. Any terms agreed when the genetic resources were accessed still apply. Access and benefit-sharing questions are handled by the ABS service, not by the DataBank. Learn more →
taxon 588Also known as: Providencia stuartii (Buttiaux et al. 1954) Ewing 1962 (Approved Lists 1980), Providencia thailandensis, Providencia thailandensis Khunthongpan et al. 2014
No local or indigenous names recorded yet.
Cosmopolitan
Occurrence records: Recorded in Africa and elsewhere. 28 of 209 GBIF records (13%) are from Africa (checked 10/12/2026). A hint from GBIF and the genomes on this Hub, not an assessment: GBIF includes zoo and travel records.
Species that share this one's nearest groups in NCBI Taxonomy. This is how they're classified, not a phylogeny. See it in the species tree.
Origin: hub
54 downloads
First synced: 10/11/2026 · Last updated: 10/12/2026
Source: NCBI GCF_041024755.1 · View at source ↗
Download annotation (GFF3) · Download CDS (FASTA) · Download proteins (FASTA)
Collection: Nigeria
Sequencing: Oxford Nanopore GridION · unicycler v. 0.4.9 · 50x coverage
Released: 2024-08-03 · Submitted by: University of Oxford
publiccc0AFDSI-SEQ-6039 Benefit-sharing under CBD Decision 16/2 and national frameworks →Country of origin: NG · PIC: unknown · MAT: unknown
GoaT: no record for this species (not eukaryotic, or not yet sequenced)
Publicly accessible — no request needed.
Origin: hub
57 downloads
First synced: 10/11/2026 · Last updated: 10/12/2026
Source: NCBI GCF_041024695.1 · View at source ↗
Download annotation (GFF3) · Download CDS (FASTA) · Download proteins (FASTA)
Collection: Nigeria
Sequencing: Oxford Nanopore GridION · unicycler v. 0.4.9 · 50x coverage
Released: 2024-08-03 · Submitted by: University of Oxford
publiccc0AFDSI-SEQ-6038 Benefit-sharing under CBD Decision 16/2 and national frameworks →Country of origin: NG · PIC: unknown · MAT: unknown
GoaT: no record for this species (not eukaryotic, or not yet sequenced)
Publicly accessible — no request needed.
protein 14652 — 288 aa
nudC — 259 aa
metL — 813 aa
hflB — 657 aa
hmp — 399 aa
gpt — 154 aa
cysG — 471 aa
pyrG — 545 aa
mrcB — 839 aa
glmU — 456 aa
AlphaFold DB proteome: UP000179588 ↗
PRIDE — project-level reference (metadata only; no per-protein identifications are available via PRIDE's public API)
High-Intensity Comparative and Quantitative Proteomics of Histamine-Forming and Other Biogenic Amine-Producing Bacteria Present in Seafood (PXD043997) ↗AFDSI-PROJREF-793
ChEMBL rows are compounds active against a protein target from this organism — not confirmed as compounds the species itself produces, unlike ANPDB's.
ChEMBL: CHEMBL47891 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; MIC 16.0 ug.mL-1AFDSI-METABOLOMICS-2285
ChEMBL: CHEMBL48072 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; MIC 2.0 ug.mL-1AFDSI-METABOLOMICS-2287
ChEMBL: CHEMBL141308 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; MIC 2.0 ug.mL-1AFDSI-METABOLOMICS-2291
ChEMBL: CHEMBL47891 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; MIC 16.0 ug.mL-1AFDSI-METABOLOMICS-2284
ChEMBL: CHEMBL48072 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; MIC 2.0 ug.mL-1AFDSI-METABOLOMICS-2286
ChEMBL: CHEMBL141308 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; MIC 2.0 ug.mL-1AFDSI-METABOLOMICS-2288
ChEMBL: CHEMBL344476 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; MIC 128.0 ug.mL-1AFDSI-METABOLOMICS-2289
ChEMBL: CHEMBL45890 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; MIC 4.0 ug.mL-1AFDSI-METABOLOMICS-2290
ChEMBL: CHEMBL343748 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; MIC 1.0 ug.mL-1
MetaboLights: Analysis of 3274 bacterial isolates by rapid evaporative ionisation mass spectrometry (REIMS) (View at source ↗)AFDSI-METABPROF-285
MetaboLights: Harnessing microbial-derived metabolites in the urinary tract to prevent infection induced catheter encrustation (View at source ↗)AFDSI-METABPROF-283
MetaboLights: Mapping human microbiome drug metabolism by gut bacteria and their genes (View at source ↗)AFDSI-METABPROF-284
pLDDT confidence: 90.6
Auto-synced from AlphaFold DB AF-A0A1S1HK84-F1 · View at source ↗
publiccc_byAFDSI-STRUCT-17534-V2pLDDT confidence: 81.8
Auto-synced from AlphaFold DB AF-A0A1S1HL96-F1 · View at source ↗
publiccc_byAFDSI-STRUCT-17560-V2pLDDT confidence: 89.9
Auto-synced from AlphaFold DB AF-A0A1S1HR83-F1 · View at source ↗
publiccc_byAFDSI-STRUCT-17522-V2pLDDT confidence: 93.3
Auto-synced from AlphaFold DB AF-A0A1S1HLG9-F1 · View at source ↗
publiccc_byAFDSI-STRUCT-17562-V2pLDDT confidence: 95.4
Auto-synced from AlphaFold DB AF-A0A1S1HUS8-F1 · View at source ↗
publiccc_byAFDSI-STRUCT-17536-V2No African occurrence records found for this species in GBIF — please confirm this is within this platform's African-origin/endemic/indigenous scope. This is a non-blocking, informational check only: GBIF coverage is real but imperfect, so a genuinely African species can still show no records here.
A node's own derived bioinformatics-analysis output (e.g. an SSR/microsatellite discovery archive) run against this species' own genome data — see the Derived Analysis page for the full catalog.
MegaSSR — ssr_discovery
derived from genome record AFDSI-SEQ-6039
File: GCF_041024755.1_megassr_results.tar.gz
Tool version: MegaSSR v3.0.0 (UM6P patched)
Native — captured by Northern-MA-UM6P-8787752738 · View at source ↗
cc_by public Country of origin not recorded: see how benefit-sharing works →
AFDSI-ANALYSIS-20157MegaSSR — ssr_discovery
derived from genome record AFDSI-SEQ-6038
File: GCF_041024695.1_megassr_results.tar.gz
Tool version: MegaSSR v3.0.0 (UM6P patched)
Native — captured by Northern-MA-UM6P-8787752738 · View at source ↗
cc_by public Country of origin not recorded: see how benefit-sharing works →
AFDSI-ANALYSIS-20155There are more related species. Open the species tree to see them all.
ChEMBL: CHEMBL140068 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; MIC 0.5 ug.mL-1AFDSI-METABOLOMICS-2293
ChEMBL: CHEMBL46664 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; MIC 2.0 ug.mL-1AFDSI-METABOLOMICS-2295
ChEMBL: CHEMBL45586 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; MIC 0.5 ug.mL-1AFDSI-METABOLOMICS-2297
ChEMBL: CHEMBL125318 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; MIC 0.5 ug.mL-1AFDSI-METABOLOMICS-2299
ChEMBL: PENICILLIN G (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; Activity 43.0 %AFDSI-METABOLOMICS-2301
ChEMBL: CEFTAZIDIME (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; Km 26000.0 nMAFDSI-METABOLOMICS-2302
ChEMBL: CHEMBL343748 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; MIC 1.0 ug.mL-1AFDSI-METABOLOMICS-2294
ChEMBL: CHEMBL46664 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; MIC 2.0 ug.mL-1AFDSI-METABOLOMICS-2296
ChEMBL: CHEMBL45586 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; MIC 0.5 ug.mL-1AFDSI-METABOLOMICS-2298
ChEMBL: CHEMBL125318 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; MIC 0.5 ug.mL-1AFDSI-METABOLOMICS-2300
ChEMBL: PENICILLIN G (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; Activity 43.0 %AFDSI-METABOLOMICS-2303
ChEMBL: CEFEPIME (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; Kcat 3.0 /sAFDSI-METABOLOMICS-2305
ChEMBL: CEPHALORIDINE (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; Kcat/Km 0.58 /s/microMAFDSI-METABOLOMICS-2307
ChEMBL: ISOAUROSTATIN (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; IC50 400000.0 nMAFDSI-METABOLOMICS-2309
ChEMBL: TOPOSTATIN (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; IC50 19000.0 nMAFDSI-METABOLOMICS-2312
ChEMBL: DOXORUBICIN (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; IC50 200000.0 nMAFDSI-METABOLOMICS-2314
ChEMBL: CEFEPIME (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; Kcat 3.0 /sAFDSI-METABOLOMICS-2304
ChEMBL: CEPHALORIDINE (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; Kcat/Km 0.58 /s/microMAFDSI-METABOLOMICS-2306
ChEMBL: ISOAUROSTATIN (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; IC50 400000.0 nMAFDSI-METABOLOMICS-2308
ChEMBL: TOPOSTATIN (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; IC50 19000.0 nMAFDSI-METABOLOMICS-2310
ChEMBL: CAMPTOTHECIN (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; IC50 300000.0 nMAFDSI-METABOLOMICS-2311
ChEMBL: DOXORUBICIN (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; IC50 200000.0 nMAFDSI-METABOLOMICS-2313