Vibrio alginolyticus

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Also known as: Beneckea alginolytica, Oceanomonas alginolytica, Pseudomonas creosotensis

Taxonomic classification

View at source ↗

Related species in the DataBank

Species that share this one's nearest groups in NCBI Taxonomy. This is how they're classified, not a phylogeny. See it in the species tree.

Genome browser

Sequence records

AlphaFold DB proteome: UP000054316 ↗

Proteomics (external sources)

PRIDE — project-level reference (metadata only; no per-protein identifications are available via PRIDE's public API)

Chemical Profiles (external sources)

ChEMBL rows are compounds active against a protein target from this organism — not confirmed as compounds the species itself produces, unlike ANPDB's.

ChEMBL: CHEMBL2303834 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; MIC 2000.0 p.p.m.AFDSI-METABOLOMICS-2937Copy ID

ChEMBL: CHEMBL2303832 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; MIC 2000.0 p.p.m.AFDSI-METABOLOMICS-2938Copy ID

ChEMBL: CHEMBL2303833 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; MIC 500.0 p.p.m.AFDSI-METABOLOMICS-2939Copy ID

ChEMBL: CHEMBL2303831 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; MICAFDSI-METABOLOMICS-2940Copy ID

ChEMBL: CHEMBL2303830 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; MIC 2000.0 p.p.m.AFDSI-METABOLOMICS-2941Copy ID

ChEMBL: CHEMBL294351 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; ActivityAFDSI-METABOLOMICS-2942Copy ID

ChEMBL: CHEMBL1794996 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; ActivityAFDSI-METABOLOMICS-2943Copy ID

Metabolic Profiles (external sources)

MetaboLights: Analysis of 3274 bacterial isolates by rapid evaporative ionisation mass spectrometry (REIMS) (View at source ↗)AFDSI-METABPROF-336Copy ID

KEGG: KEGG genome-based metabolic profile (vag) (View at source ↗) — Genome-based pathway inference (KEGG) — reflects which metabolic pathways this species' annotated genes place it in, not experimentally measured metabolite presenceAFDSI-METABPROF-437Copy ID

Protein Structures

Cellular & Molecular Imaging (external sources)

Geographic range (Africa)

27 real GBIF-recorded occurrences across Africa — see this species on GBIF ↗.

This reflects real occurrence records submitted to GBIF, not a comprehensive range map — sampling effort varies significantly by country and region, so an absence here doesn't mean the species isn't present.

MU (16)TN (5)YT (2)KE (1)MA (1)NG (1)SC (1)

Derived analysis results

A node's own derived bioinformatics-analysis output (e.g. an SSR/microsatellite discovery archive) run against this species' own genome data — see the Derived Analysis page for the full catalog.

• Aeromonas aquatica · 1 genome, 12 proteins, 11 protein structures, 1 cellular and molecular image
• Aeromonas caviae · 1 genome, 1 transcriptome, 54 proteins, 55 protein structures, 14 chemical profiles, 1 metabolic profile
• Aeromonas hydrophila · 2 genomes, 1 transcriptome, 20 proteins, 23 protein structures, 46 chemical profiles, 1 metabolic profile
• Aeromonas jandaei · 1 genome, 51 proteins, 26 protein structures, 1 metabolic profile
• Aeromonas sp. · 1 genome, 20 proteins, 18 protein structures, 18 chemical profiles, 18 cellular and molecular images
• Aeromonas taiwanensis · 1 genome, 50 proteins, 96 protein structures
• Aeromonas veronii · 6 genomes, 1 transcriptome, 52 proteins, 55 protein structures, 20 chemical profiles, 3 metabolic profiles
• Citrobacter amalonaticus · 1 genome, 1 transcriptome, 50 proteins, 31 protein structures, 50 proteomics profiles, 7 chemical profiles, 1 metabolic profile, 4 cellular and molecular images
• Citrobacter braakii · 3 genomes, 1 transcriptome, 50 proteins, 37 protein structures, 14 chemical profiles, 2 metabolic profiles, 4 cellular and molecular images
• Citrobacter cronae · 4 genomes, 50 proteins, 32 protein structures, 4 cellular and molecular images
• Citrobacter freundii · 4 genomes, 1 transcriptome, 50 proteins, 40 protein structures, 67 chemical profiles, 3 metabolic profiles, 3 cellular and molecular images
• Citrobacter portucalensis · 23 genomes, 50 proteins, 41 protein structures, 1 metabolic profile, 4 cellular and molecular images
• Citrobacter sp. Awk 2 · 1 genome, 17 cellular and molecular images
• Citrobacter sp. Awk 4 · 1 genome, 20 cellular and molecular images

There are more related species. Open the species tree to see them all.

See all 7 derived analysis results for this species, with search →