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Benefit-sharing from DSI rests on the provider country's national framework. Where it requires bilateral benefit-sharing for DSI, those terms apply. Where it gives effect to the CBD multilateral mechanism, users of its publicly available DSI should share benefits through it: all users non-monetary benefits, as appropriate, and commercial users above set size thresholds also monetary contributions to the Cali Fund. Where it is silent on DSI, the position is not yet settled: check with the country's competent national authority, through the ABS service. Any terms agreed when the genetic resources were accessed still apply. Access and benefit-sharing questions are handled by the ABS service, not by the DataBank. Learn more →
taxon 61652Also known as: Serratia marinorubra
No local or indigenous names recorded yet.
Not yet assessed
Occurrence records: Recorded mostly outside Africa. 6 of 152 GBIF records (4%) are from Africa (checked 10/12/2026). A hint from GBIF and the genomes on this Hub, not an assessment: GBIF includes zoo and travel records.
Species that share this one's nearest groups in NCBI Taxonomy. This is how they're classified, not a phylogeny. See it in the species tree.
Origin: hub
42 downloads
First synced: 10/11/2026 · Last updated: 10/12/2026
Source: NCBI GCF_024605655.1 · View at source ↗
Download annotation (GFF3) · Download CDS (FASTA) · Download proteins (FASTA)
Collection: Nigeria:Sokkoto State,Ilella
Sequencing: Illumina · SPAdes v. November 2021 · 20x coverage
Released: 2022-08-09 · Submitted by: University of Jos
publiccc0AFDSI-SEQ-6443 Benefit-sharing under CBD Decision 16/2 and national frameworks →Country of origin: NG · PIC: unknown · MAT: unknown
GoaT: no record for this species (not eukaryotic, or not yet sequenced)
Publicly accessible — no request needed.
fadB — 729 aa
tesB — 287 aa
cobA — 476 aa
tesA — 209 aa
cobA — 467 aa
hmpA — 396 aa
protein 15953 — 811 aa
argD — 406 aa
thrA — 819 aa
ydiU — 480 aa
AlphaFold DB proteome: UP000624159 ↗
PaxDb — real per-protein abundance
ompA_4 (61652.AXX16_3438) — abundance 48530AFDSI-PROTEOMICS-1601
dppA_1 (61652.AXX16_0421) — abundance 19131AFDSI-PROTEOMICS-1602
AML57340.1 (61652.AXX16_1627) — abundance 17266AFDSI-PROTEOMICS-1603
hupB (61652.AXX16_4088) — abundance 14820AFDSI-PROTEOMICS-1604
AML57731.1 (61652.AXX16_2023) — abundance 13942AFDSI-PROTEOMICS-1605
mdh (61652.AXX16_0154) — abundance 13869AFDSI-PROTEOMICS-1606
AML58942.1 (61652.AXX16_3246) — abundance 13646AFDSI-PROTEOMICS-1607
tsaA (61652.AXX16_4125) — abundance 10843AFDSI-PROTEOMICS-1608
AML56593.1 (61652.AXX16_0865) — abundance 10131AFDSI-PROTEOMICS-1609
tufA_1 (61652.AXX16_0270) — abundance 10131AFDSI-PROTEOMICS-1610
KEGG: KEGG genome-based metabolic profile (srz) (View at source ↗) — Genome-based pathway inference (KEGG) — reflects which metabolic pathways this species' annotated genes place it in, not experimentally measured metabolite presenceAFDSI-METABPROF-414
pLDDT confidence: 96.8
Auto-synced from AlphaFold DB AF-A0A140F123-F1 · View at source ↗
publiccc_byAFDSI-STRUCT-18550-V2pLDDT confidence: 93.6
Auto-synced from AlphaFold DB AF-A0A3S4WIR6-F1 · View at source ↗
publiccc_byAFDSI-STRUCT-18532-V2pLDDT confidence: 90.0
Auto-synced from AlphaFold DB AF-A0A3S4X297-F1 · View at source ↗
publiccc_byAFDSI-STRUCT-18534-V2pLDDT confidence: 97.6
Auto-synced from AlphaFold DB AF-A0A3S4YMZ8-F1 · View at source ↗
publiccc_byAFDSI-STRUCT-18536-V2pLDDT confidence: 83.3
Auto-synced from AlphaFold DB AF-A0A448S2N3-F1 · View at source ↗
publiccc_byAFDSI-STRUCT-18538-V2BioImage Archive: An Rhs effector uses distinct target cell functions to intoxicate bacterial and fungal competitors (View on source archive ↗)AFDSI-CELL-7540
BioImage Archive: Holotomographic datasets in OME-Zarr format for compression benchmarking of holotomographic data (View on source archive ↗)AFDSI-CELL-7541
6 real GBIF-recorded occurrences across Africa — see this species on GBIF ↗.
This reflects real occurrence records submitted to GBIF, not a comprehensive range map — sampling effort varies significantly by country and region, so an absence here doesn't mean the species isn't present.
A node's own derived bioinformatics-analysis output (e.g. an SSR/microsatellite discovery archive) run against this species' own genome data — see the Derived Analysis page for the full catalog.
MegaSSR — ssr_discovery
derived from genome record AFDSI-SEQ-6443
File: GCF_024605655.1_megassr_results.tar.gz
Tool version: MegaSSR v3.0.0 (UM6P patched)
Native — captured by Northern-MA-UM6P-8787752738 · View at source ↗
cc_by public Country of origin not recorded: see how benefit-sharing works →
AFDSI-ANALYSIS-19415There are more related species. Open the species tree to see them all.