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Benefit-sharing from DSI rests on the provider country's national framework. Where it requires bilateral benefit-sharing for DSI, those terms apply. Where it gives effect to the CBD multilateral mechanism, users of its publicly available DSI should share benefits through it: all users non-monetary benefits, as appropriate, and commercial users above set size thresholds also monetary contributions to the Cali Fund. Where it is silent on DSI, the position is not yet settled: check with the country's competent national authority, through the ABS service. Any terms agreed when the genetic resources were accessed still apply. Access and benefit-sharing questions are handled by the ABS service, not by the DataBank. Learn more →
taxon 615Also known as: Bacillus marcescens, Serratia marcescens subsp. marcescens, Serratia marcescens subsp. sakuensis
No local or indigenous names recorded yet.
Cosmopolitan
Occurrence records: Recorded mostly outside Africa. 122 of 3,032 GBIF records (4%) are from Africa (checked 10/12/2026). A hint from GBIF and the genomes on this Hub, not an assessment: GBIF includes zoo and travel records.
Species that share this one's nearest groups in NCBI Taxonomy. This is how they're classified, not a phylogeny. See it in the species tree.
Origin: hub
66 downloads
First synced: 10/11/2026 · Last updated: 10/12/2026
Source: NCBI GCF_021533385.1 · View at source ↗
Download annotation (GFF3) · Download CDS (FASTA) · Download proteins (FASTA)
Collection: Nigeria
Sequencing: Illumina MiSeq · Velvet v. 1.1.04 · 37x coverage
Released: 2022-01-20 · Submitted by: Igbinedion University Okada Edo state Nigeria
publiccc0AFDSI-SEQ-5902 Benefit-sharing under CBD Decision 16/2 and national frameworks →Country of origin: NG · PIC: unknown · MAT: unknown
GoaT: no record for this species (not eukaryotic, or not yet sequenced)
Publicly accessible — no request needed.
Origin: hub
65 downloads
First synced: 10/11/2026 · Last updated: 10/12/2026
Source: NCBI GCF_050845995.1 · View at source ↗
Download annotation (GFF3) · Download CDS (FASTA) · Download proteins (FASTA)
Collection: South Africa
Sequencing: Illumina · SPAdes v. Version 4.2.0 · 35x coverage
Released: 2025-06-07 · Submitted by: North-West University
publiccc0AFDSI-SEQ-5903 Benefit-sharing under CBD Decision 16/2 and national frameworks →Country of origin: ZA · PIC: unknown · MAT: unknown
GoaT: no record for this species (not eukaryotic, or not yet sequenced)
Publicly accessible — no request needed.
Origin: hub
63 downloads
First synced: 10/11/2026 · Last updated: 10/12/2026
Source: NCBI GCF_020731385.1 · View at source ↗
Download annotation (GFF3) · Download CDS (FASTA) · Download proteins (FASTA)
Collection: South Africa: Pretoria
Sequencing: Illumina NextSeq · SPAdes v. October-2021 · 125x coverage
Released: 2021-11-02 · Submitted by: Agricultural Research Council-API
publiccc0AFDSI-SEQ-6439 Benefit-sharing under CBD Decision 16/2 and national frameworks →Country of origin: ZA · PIC: unknown · MAT: unknown
GoaT: no record for this species (not eukaryotic, or not yet sequenced)
Publicly accessible — no request needed.
Origin: hub
64 downloads
First synced: 10/11/2026 · Last updated: 10/12/2026
Source: NCBI GCF_000738535.1 · View at source ↗
Download annotation (GFF3) · Download CDS (FASTA) · Download proteins (FASTA)
Collection: South Africa: North West Province
Sequencing: Illumina MiSeq · CLC NGS Cell v. 7 · 1x coverage
Released: 2014-08-07 · Submitted by: University of the Witwatersrand
publiccc0AFDSI-SEQ-6440 Benefit-sharing under CBD Decision 16/2 and national frameworks →Country of origin: ZA · PIC: unknown · MAT: unknown
GoaT: no record for this species (not eukaryotic, or not yet sequenced)
Publicly accessible — no request needed.
Origin: hub
63 downloads
First synced: 10/11/2026 · Last updated: 10/12/2026
Source: NCBI GCA_031277675.1 · View at source ↗
Download annotation (GFF3) · Download CDS (FASTA) · Download proteins (FASTA)
Collection: Cameroon: Ebogo II, Mbalmayo
Sequencing: Illumina NovaSeq · MEGAHIT v. 1.2.8 · 90x coverage
Released: 2023-09-08 · Submitted by: Max Planck Institute for Terrestrial Microbiology
publiccc0AFDSI-SEQ-6441 Benefit-sharing under CBD Decision 16/2 and national frameworks →Country of origin: CM · PIC: unknown · MAT: unknown
GoaT: no record for this species (not eukaryotic, or not yet sequenced)
Publicly accessible — no request needed.
Origin: hub
64 downloads
First synced: 10/11/2026 · Last updated: 10/12/2026
Source: NCBI GCF_011684105.1 · View at source ↗
Download annotation (GFF3) · Download CDS (FASTA) · Download proteins (FASTA)
Collection: South Africa: Pretoria
Sequencing: Illumina MiSeq · SPAdes v. 3.12.0 · 34.2x coverage
Released: 2020-03-23 · Submitted by: University of South Africa
publiccc0AFDSI-SEQ-5901 Benefit-sharing under CBD Decision 16/2 and national frameworks →Country of origin: ZA · PIC: unknown · MAT: unknown
GoaT: no record for this species (not eukaryotic, or not yet sequenced)
Publicly accessible — no request needed.
cobA — 476 aa
protein 15898 — 287 aa
protein 15899 — 223 aa
cobA — 467 aa
metL — 811 aa
ppnP — 96 aa
hmp — 396 aa
rlmN — 398 aa
arnA — 660 aa
murE — 495 aa
Origin: hub
63 downloads
First synced: 10/11/2026 · Last updated: 10/12/2026
Source: NCBI GCF_030374145.1 · View at source ↗
Download annotation (GFF3) · Download CDS (FASTA) · Download proteins (FASTA)
Collection: South Africa
Sequencing: Illumina NovaSeq · Unicycler v. 0.48 · 300x coverage
Released: 2023-06-29 · Submitted by: UKZN
publiccc0AFDSI-SEQ-6442 Benefit-sharing under CBD Decision 16/2 and national frameworks →Country of origin: ZA · PIC: unknown · MAT: unknown
GoaT: no record for this species (not eukaryotic, or not yet sequenced)
Publicly accessible — no request needed.
Origin: hub
63 downloads
First synced: 10/11/2026 · Last updated: 10/12/2026
Source: NCBI GCF_023703065.1 · View at source ↗
Download annotation (GFF3) · Download CDS (FASTA) · Download proteins (FASTA)
Collection: Benin: Agro-ecological zone of West Atacora
Sequencing: Illumina NovaSeq · Megahit v. 1.2.9 · 135x coverage
Released: 2022-06-12 · Submitted by: North West University
publiccc0AFDSI-SEQ-6444 Benefit-sharing under CBD Decision 16/2 and national frameworks →Country of origin: BJ · PIC: unknown · MAT: unknown
GoaT: no record for this species (not eukaryotic, or not yet sequenced)
Publicly accessible — no request needed.
Origin: hub
0 downloads
First synced: 11/8/2026 · Last updated: 11/8/2026
Source: NCBI U54765.1 · View at source ↗
Released: 1996-05-16
publiccc0AFDSI-SEQ-6562 Country of origin not recorded: see how benefit-sharing works →Publicly accessible — no request needed.
AlphaFold DB proteome: UP000247823 ↗
PRIDE — project-level reference (metadata only; no per-protein identifications are available via PRIDE's public API)
Tvp complexes support formation of the VgrG-PAAR spike during Type VI secretion system assembly (PXD076681) ↗AFDSI-PROJREF-916
The Type VI Secretion System Antifungal Effector Tfe2 Inhibits Protein Translation and Drives Hyperactivation of TORC1. (PXD070762) ↗AFDSI-PROJREF-917
Proteomic analysis of metronidazole resistance in the human facultative pathogen Bacteroides fragilis (PXD039809) ↗AFDSI-PROJREF-918
A Dataset for Developing Proteomic Tools in Pathogen Detection via Differential Cell Lysis from Whole Blood Samples (PXD039165) ↗AFDSI-PROJREF-919
Proteomics of mixtures of specific fractions from microbial isolates for multiplex proteotyping without labeling (PXD035870) ↗AFDSI-PROJREF-920
The fish pathogen Aliivibrio salmonicida LFI1238 can degrade and utilize chitin as a nutrient source despite major gene loss in the chitinolytic pathway (PXD021397) ↗AFDSI-PROJREF-921
ChEMBL rows are compounds active against a protein target from this organism — not confirmed as compounds the species itself produces, unlike ANPDB's.
ChEMBL: KANAMYCIN SULFATE (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; MIC 7.8 ug.mL-1AFDSI-METABOLOMICS-2610
ChEMBL: PIPERACILLIN (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; MIC 64.0 ug.mL-1AFDSI-METABOLOMICS-2611
ChEMBL: CHEMBL287780 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; MIC 15.6 ug.mL-1AFDSI-METABOLOMICS-2613
ChEMBL: CYCLOSERINE (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; MIC 128.0 ug.mL-1AFDSI-METABOLOMICS-2615
ChEMBL: CHEMBL1795040 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; MIC 4.0 ug.mL-1AFDSI-METABOLOMICS-2617
ChEMBL: CHEMBL303053 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; MIC 64.0 ug.mL-1AFDSI-METABOLOMICS-2619
ChEMBL: CHEMBL302400 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; MIC 32.0 ug.mL-1AFDSI-METABOLOMICS-2621
ChEMBL: CHEMBL37399 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; MIC 31.2 ug.mL-1AFDSI-METABOLOMICS-2623
ChEMBL: IMIPENEM ANHYDROUS (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; MIC 1.0 ug.mL-1
MetaboLights: Bacterial profiles analysed by REIMS using Xevo G2-XS (View at source ↗)AFDSI-METABPROF-311
MetaboLights: Analysis of 3274 bacterial isolates by rapid evaporative ionisation mass spectrometry (REIMS) (View at source ↗)AFDSI-METABPROF-312
pLDDT confidence: 92.4
Auto-synced from AlphaFold DB AF-A0AB33FK70-F1 · View at source ↗
publiccc_byAFDSI-STRUCT-18466-V2pLDDT confidence: 92.6
Auto-synced from AlphaFold DB AF-A0A084X5D1-F1 · View at source ↗
publiccc_byAFDSI-STRUCT-18488-V2pLDDT confidence: 88.3
Auto-synced from AlphaFold DB AF-A0AB33G1R9-F1 · View at source ↗
publiccc_byAFDSI-STRUCT-18448-V2pLDDT confidence: 90.0
Auto-synced from AlphaFold DB AF-A0A086FGF8-F1 · View at source ↗
publiccc_byAFDSI-STRUCT-18490-V2pLDDT confidence: 96.3
Auto-synced from AlphaFold DB AF-A0A0G3SN01-F1 · View at source ↗
publiccc_byAFDSI-STRUCT-18468-V2camera_trap at Yemen · Source: GBIF 4863554029 (View at source ↗)AFDSI-IMG-37820
BioImage Archive: An Rhs effector uses distinct target cell functions to intoxicate bacterial and fungal competitors (View on source archive ↗)AFDSI-CELL-7536
BioImage Archive: Holotomographic datasets in OME-Zarr format for compression benchmarking of holotomographic data (View on source archive ↗)AFDSI-CELL-7537
No African occurrence records found for this species in GBIF — please confirm this is within this platform's African-origin/endemic/indigenous scope. This is a non-blocking, informational check only: GBIF coverage is real but imperfect, so a genuinely African species can still show no records here.
A node's own derived bioinformatics-analysis output (e.g. an SSR/microsatellite discovery archive) run against this species' own genome data — see the Derived Analysis page for the full catalog.
MegaSSR — ssr_discovery
derived from genome record AFDSI-SEQ-5903
File: GCF_050845995.1_megassr_results.tar.gz
Tool version: MegaSSR v3.0.0 (UM6P patched)
Native — captured by Northern-MA-UM6P-8787752738 · View at source ↗
cc_by public Country of origin not recorded: see how benefit-sharing works →
AFDSI-ANALYSIS-20355MegaSSR — ssr_discovery
derived from genome record AFDSI-SEQ-6442
File: GCF_030374145.1_megassr_results.tar.gz
Tool version: MegaSSR v3.0.0 (UM6P patched)
Native — captured by Northern-MA-UM6P-8787752738 · View at source ↗
cc_by public Country of origin not recorded: see how benefit-sharing works →
AFDSI-ANALYSIS-19715There are more related species. Open the species tree to see them all.
ChEMBL: CHEMBL454279 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; IC50 1100.0 nMAFDSI-METABOLOMICS-2633
ChEMBL: CHEMBL493316 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; IC50 750.0 nMAFDSI-METABOLOMICS-2636
ChEMBL: CHEMBL522670 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; IC50 90.0 nMAFDSI-METABOLOMICS-2638
ChEMBL: PIPERACILLIN (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; MIC 64.0 ug.mL-1AFDSI-METABOLOMICS-2612
ChEMBL: CHEMBL287780 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; MIC 15.6 ug.mL-1AFDSI-METABOLOMICS-2614
ChEMBL: CYCLOSERINE (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; MIC 128.0 ug.mL-1AFDSI-METABOLOMICS-2616
ChEMBL: CHEMBL1795040 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; MIC 4.0 ug.mL-1AFDSI-METABOLOMICS-2618
ChEMBL: CHEMBL303053 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; MIC 64.0 ug.mL-1AFDSI-METABOLOMICS-2620
ChEMBL: CHEMBL302400 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; MIC 32.0 ug.mL-1AFDSI-METABOLOMICS-2622
ChEMBL: CHEMBL37399 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; MIC 31.2 ug.mL-1AFDSI-METABOLOMICS-2624
ChEMBL: IMIPENEM ANHYDROUS (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; MIC 1.0 ug.mL-1AFDSI-METABOLOMICS-2626
ChEMBL: CHEMBL410714 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; MIC 4.0 ug.mL-1AFDSI-METABOLOMICS-2628
ChEMBL: CHEMBL450552 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; IC50 140.0 nMAFDSI-METABOLOMICS-2629
ChEMBL: CHEMBL506684 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; IC50 25.0 nMAFDSI-METABOLOMICS-2632
ChEMBL: CHEMBL410714 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; MIC 4.0 ug.mL-1AFDSI-METABOLOMICS-2627
ChEMBL: CHEMBL450552 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; IC50 140.0 nMAFDSI-METABOLOMICS-2630
ChEMBL: CHEMBL506684 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; IC50 25.0 nMAFDSI-METABOLOMICS-2631
ChEMBL: CHEMBL454279 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; IC50 1100.0 nMAFDSI-METABOLOMICS-2634
ChEMBL: CHEMBL493316 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; IC50 750.0 nMAFDSI-METABOLOMICS-2635
ChEMBL: CHEMBL522670 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; IC50 90.0 nMAFDSI-METABOLOMICS-2637
ChEMBL: CHEMBL449892 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; IC50 8400.0 nMAFDSI-METABOLOMICS-2639
ChEMBL: CHEMBL443088 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; IC50 31000.0 nMAFDSI-METABOLOMICS-2640
ChEMBL: CHEMBL492713 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; IC50 6600.0 nMAFDSI-METABOLOMICS-2641
ChEMBL: CHEMBL492714 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; IC50 32000.0 nMAFDSI-METABOLOMICS-2642
ChEMBL: ARGIFIN (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; IC50 25.0 nMAFDSI-METABOLOMICS-2643
ChEMBL: PENICILLIN G (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; Kcat 8.8 /sAFDSI-METABOLOMICS-2645
ChEMBL: CEFTOBIPROLE (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; Kcat 5.9 /sAFDSI-METABOLOMICS-2647
ChEMBL: CEPHALORIDINE (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; Kcat/Km 3.0 /s/microMAFDSI-METABOLOMICS-2649
ChEMBL: CEFEPIME (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; Kcat 1.5 /sAFDSI-METABOLOMICS-2651
ChEMBL: ARGADIN (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; IC50 3.4 nMAFDSI-METABOLOMICS-2653
ChEMBL: CHEMBL449892 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; IC50 8400.0 nMAFDSI-METABOLOMICS-2644
ChEMBL: PENICILLIN G (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; Kcat 8.8 /sAFDSI-METABOLOMICS-2646
ChEMBL: CEFTOBIPROLE (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; Kcat 5.9 /sAFDSI-METABOLOMICS-2648
ChEMBL: CEPHALORIDINE (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; Kcat/Km 3.0 /s/microMAFDSI-METABOLOMICS-2650
ChEMBL: CEFEPIME (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; Kcat 1.5 /sAFDSI-METABOLOMICS-2652
ChEMBL: ARGADIN (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; IC50 3.4 nMAFDSI-METABOLOMICS-2654
MegaSSR — ssr_discovery
derived from genome record AFDSI-SEQ-6444
File: GCF_023703065.1_megassr_results.tar.gz
Tool version: MegaSSR v3.0.0 (UM6P patched)
Native — captured by Northern-MA-UM6P-8787752738 · View at source ↗
cc_by public Country of origin not recorded: see how benefit-sharing works →
AFDSI-ANALYSIS-19344MegaSSR — ssr_discovery
derived from genome record AFDSI-SEQ-5902
File: GCF_021533385.1_megassr_results.tar.gz
Tool version: MegaSSR v3.0.0 (UM6P patched)
Native — captured by Northern-MA-UM6P-8787752738 · View at source ↗
cc_by public Country of origin not recorded: see how benefit-sharing works →
AFDSI-ANALYSIS-19303MegaSSR — ssr_discovery
derived from genome record AFDSI-SEQ-6439
File: GCF_020731385.1_megassr_results.tar.gz
Tool version: MegaSSR v3.0.0 (UM6P patched)
Native — captured by Northern-MA-UM6P-8787752738 · View at source ↗
cc_by public Country of origin not recorded: see how benefit-sharing works →
AFDSI-ANALYSIS-19202