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Benefit-sharing from DSI rests on the provider country's national framework. Where it requires bilateral benefit-sharing for DSI, those terms apply. Where it gives effect to the CBD multilateral mechanism, users of its publicly available DSI should share benefits through it: all users non-monetary benefits, as appropriate, and commercial users above set size thresholds also monetary contributions to the Cali Fund. Where it is silent on DSI, the position is not yet settled: check with the country's competent national authority, through the ABS service. Any terms agreed when the genetic resources were accessed still apply. Access and benefit-sharing questions are handled by the ABS service, not by the DataBank. Learn more →
African rice
taxon 4538Not yet assessed
Occurrence records: Recorded in Africa and elsewhere. 11,714 of 18,773 GBIF records (62%) are from Africa (checked 10/9/2026). A hint from GBIF and the genomes on this Hub, not an assessment: GBIF includes zoo and travel records.
Species that share this one's nearest groups in NCBI Taxonomy. This is how they're classified, not a phylogeny. See it in the species tree.
Origin: hub
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First synced: 8/26/2026 · Last updated: 8/26/2026
Source: NCBI GCA_051998455.1 · View at source ↗
Collection: Nigeria
Sequencing: PacBio · Hifiasm v. 0.19.5-r587; Verkko v. v1.4 · 32.4x coverage
Released: 2025-08-13 · Submitted by: zhejiang university
publiccc0AFDSI-SEQ-362 Benefit-sharing under CBD Decision 16/2 and national frameworks →Country of origin: NG · PIC: unknown · MAT: unknown
GoaT: Chromosome assembly · 0.37 Gb · scaffold N50 29,182,615 · 12 chromosomes · View at source ↗
Publicly accessible — no request needed.
WAXY — 609 aa
protein 2479 — 252 aa
COQ3 — 323 aa
protein 2481 — 188 aa
LOC127761687 — 2167 aa
MOCS3 — 473 aa
LOC127765125 — 463 aa
protein 2485 — 472 aa
LOC127776614 — 222 aa
LOC127777706 — 322 aa
Origin: hub
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First synced: 8/26/2026 · Last updated: 8/26/2026
Source: NCBI PV833343.1 · View at source ↗
Released: 2025-07-02
publiccc0AFDSI-SEQ-641 Country of origin not recorded: see how benefit-sharing works →Publicly accessible — no request needed.
AlphaFold DB proteome: UP000007306 ↗
PRIDE — project-level reference (metadata only; no per-protein identifications are available via PRIDE's public API)
Energetics- and transport-related protein abundance responds differentially to salt in Oryza australiensis roots (PXD013701) ↗AFDSI-PROJREF-231
Wild and cultivated species of rice have distinctive proteomic responses to drought (PXD019885) ↗AFDSI-PROJREF-230
KEGG: KEGG genome-based metabolic profile (ogl) (View at source ↗) — Genome-based pathway inference (KEGG) — reflects which metabolic pathways this species' annotated genes place it in, not experimentally measured metabolite presenceAFDSI-METABPROF-119
pLDDT confidence: 91.5
Auto-synced from AlphaFold DB AF-I1Q7D6-F1 · View at source ↗
publiccc_byAFDSI-STRUCT-13643-V2pLDDT confidence: 94.3
Auto-synced from AlphaFold DB AF-I1PBL2-F1 · View at source ↗
publiccc_byAFDSI-STRUCT-13625-V2pLDDT confidence: 93.3
Auto-synced from AlphaFold DB AF-I1QE45-F1 · View at source ↗
publiccc_byAFDSI-STRUCT-13647-V2pLDDT confidence: 90.9
Auto-synced from AlphaFold DB AF-I1PBL7-F1 · View at source ↗
publiccc_byAFDSI-STRUCT-13627-V2pLDDT confidence: 78.1
Auto-synced from AlphaFold DB AF-I1R7Q7-F1 · View at source ↗
publiccc_byAFDSI-STRUCT-13661-V2camera_trap at Tanzania, United Republic of · Source: GBIF 6134219346 (View at source ↗)AFDSI-IMG-4939
camera_trap at Sierra Leone · Source: GBIF 4980263541 (View at source ↗)AFDSI-IMG-4940
herbarium at Burkina Faso · Source: GBIF 5956014802 (View at source ↗)AFDSI-IMG-4941
herbarium at Burkina Faso · Source: GBIF 5956078473 (View at source ↗)AFDSI-IMG-4942
herbarium at Senegal · Source: GBIF 5838922124 (View at source ↗)AFDSI-IMG-4943
herbarium at Central African Republic · Source: GBIF 5956086552 (View at source ↗)AFDSI-IMG-4948
camera_trap at Gambia · Source: GBIF 4935726712 (View at source ↗)AFDSI-IMG-6449
herbarium at Burkina · Source: iDigBio 8570226b-c5b2-488f-9770-43652f0e6aab (View at source ↗)AFDSI-IMG-9135
herbarium at Mali · Source: iDigBio e7779fa2-4c7c-4863-a562-7985b5da402e (View at source ↗)AFDSI-IMG-9137
herbarium at Nigeria · Source: iDigBio fe23370c-3913-4508-8980-cf6fbf71b3c8 (View at source ↗)AFDSI-IMG-9140
BioImage Archive: Spatial distribution of three ARGONAUTEs regulates the anther phasiRNA pathway (View on source archive ↗)AFDSI-CELL-553
BioImage Archive: (View on source archive ↗)AFDSI-CELL-554
BioImage Archive: SeedGerm-VIG Image Series (View on source archive ↗)AFDSI-CELL-555
BioImage Archive: ZEP1 orchestrates template choice and crossover pathways to ensure meiotic genome integrity in rice (View on source archive ↗)AFDSI-CELL-1263
16,485 real GBIF-recorded occurrences across Africa — see this species on GBIF ↗.
This reflects real occurrence records submitted to GBIF, not a comprehensive range map — sampling effort varies significantly by country and region, so an absence here doesn't mean the species isn't present.
A node's own derived bioinformatics-analysis output (e.g. an SSR/microsatellite discovery archive) run against this species' own genome data — see the Derived Analysis page for the full catalog.
PlantLAI — ltr_assembly_index
derived from genome record AFDSI-SEQ-362
File: GCA_051998455.1_plantlai_results.tar.gz
Tool version: PlantLAI web pipeline (MegaLAI.sh -A 4; LTR_retriever v2.9.0)
Native — captured by Northern-MA-UM6P-8787752738 · View at source ↗
cc_by public Country of origin not recorded: see how benefit-sharing works →
AFDSI-ANALYSIS-21282MegaSSR — ssr_discovery
derived from genome record AFDSI-SEQ-362
File: GCA_051998455.1_megassr_results.tar.gz
Tool version: MegaSSR v3.0.0 (UM6P web pipeline)
Native — captured by Northern-MA-UM6P-8787752738 · View at source ↗
cc_by public Country of origin not recorded: see how benefit-sharing works →
AFDSI-ANALYSIS-20950