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Benefit-sharing from DSI rests on the provider country's national framework. Where it requires bilateral benefit-sharing for DSI, those terms apply. Where it gives effect to the CBD multilateral mechanism, users of its publicly available DSI should share benefits through it: all users non-monetary benefits, as appropriate, and commercial users above set size thresholds also monetary contributions to the Cali Fund. Where it is silent on DSI, the position is not yet settled: check with the country's competent national authority, through the ABS service. Any terms agreed when the genetic resources were accessed still apply. Access and benefit-sharing questions are handled by the ABS service, not by the DataBank. Learn more →
A strain of Salmonella enterica. Facts recorded for the species, such as pathogen–reservoir associations, are shown here too.
taxon 594Also known as: Salmonella enterica serovar Gallinarum, Salmonella gallinarum
No local or indigenous names recorded yet.
Not yet assessed
Occurrence records: Recorded mostly outside Africa. 5,480 of 224,002 GBIF records (2%) are from Africa (checked 10/11/2026). A hint from GBIF and the genomes on this Hub, not an assessment: GBIF includes zoo and travel records.
Species that share this one's nearest groups in NCBI Taxonomy. This is how they're classified, not a phylogeny. See it in the species tree.
Origin: hub
39 downloads
First synced: 10/11/2026 · Last updated: 10/11/2026
Source: NCBI GCA_030316425.1 · View at source ↗
Download annotation (GFF3) · Download CDS (FASTA) · Download proteins (FASTA)
Collection: Eswatini
Sequencing: IonTorrent · CLC NGS Cell v. 8.5.1 · 296x coverage
Released: 2023-06-21 · Submitted by: University of Pretoria
publiccc0AFDSI-SEQ-2233 Benefit-sharing under CBD Decision 16/2 and national frameworks →Country of origin: SZ · PIC: unknown · MAT: unknown
GoaT: no record for this species (not eukaryotic, or not yet sequenced)
Publicly accessible — no request needed.
Origin: hub
32 downloads
First synced: 10/11/2026 · Last updated: 10/11/2026
Source: NCBI GCA_030316445.1 · View at source ↗
Download annotation (GFF3) · Download CDS (FASTA) · Download proteins (FASTA)
Collection: South Africa: Gauteng
Sequencing: IonTorrent · CLC NGS Cell v. 8.5.1 · 304x coverage
Released: 2023-06-21 · Submitted by: University of Pretoria
publiccc0AFDSI-SEQ-2234 Benefit-sharing under CBD Decision 16/2 and national frameworks →Country of origin: ZA · PIC: unknown · MAT: unknown
GoaT: no record for this species (not eukaryotic, or not yet sequenced)
Publicly accessible — no request needed.
Origin: hub
34 downloads
First synced: 10/11/2026 · Last updated: 10/11/2026
Source: NCBI GCA_030316505.1 · View at source ↗
Download annotation (GFF3) · Download CDS (FASTA) · Download proteins (FASTA)
Collection: South Africa: Gauteng
Sequencing: IonTorrent · CLC NGS Cell v. 8.5.1 · 324x coverage
Released: 2023-06-21 · Submitted by: University of Pretoria
publiccc0AFDSI-SEQ-2236 Benefit-sharing under CBD Decision 16/2 and national frameworks →Country of origin: ZA · PIC: unknown · MAT: unknown
GoaT: no record for this species (not eukaryotic, or not yet sequenced)
Publicly accessible — no request needed.
Origin: hub
35 downloads
First synced: 10/11/2026 · Last updated: 10/11/2026
Source: NCBI GCA_030316485.1 · View at source ↗
Download annotation (GFF3) · Download CDS (FASTA) · Download proteins (FASTA)
Collection: South Africa: KwaZulu-Natal
Sequencing: IonTorrent · CLC NGS Cell v. 8.5.1 · 312x coverage
Released: 2023-06-21 · Submitted by: University of Pretoria
publiccc0AFDSI-SEQ-2237 Benefit-sharing under CBD Decision 16/2 and national frameworks →Country of origin: ZA · PIC: unknown · MAT: unknown
GoaT: no record for this species (not eukaryotic, or not yet sequenced)
Publicly accessible — no request needed.
Origin: hub
37 downloads
First synced: 10/11/2026 · Last updated: 10/11/2026
Source: NCBI GCA_030316525.1 · View at source ↗
Download annotation (GFF3) · Download CDS (FASTA) · Download proteins (FASTA)
Collection: South Africa: Mpumalanga
Sequencing: IonTorrent · CLC NGS Cell v. 8.5.1 · 230x coverage
Released: 2023-06-21 · Submitted by: University of Pretoria
publiccc0AFDSI-SEQ-2238 Benefit-sharing under CBD Decision 16/2 and national frameworks →Country of origin: ZA · PIC: unknown · MAT: unknown
GoaT: no record for this species (not eukaryotic, or not yet sequenced)
Publicly accessible — no request needed.
Origin: hub
34 downloads
First synced: 10/11/2026 · Last updated: 10/11/2026
Source: NCBI GCA_030316565.1 · View at source ↗
Download annotation (GFF3) · Download CDS (FASTA) · Download proteins (FASTA)
Collection: South Africa: North West
Sequencing: IonTorrent · CLC NGS Cell v. 8.5.1 · 354x coverage
Released: 2023-06-21 · Submitted by: University of Pretoria
publiccc0AFDSI-SEQ-2240 Benefit-sharing under CBD Decision 16/2 and national frameworks →Country of origin: ZA · PIC: unknown · MAT: unknown
GoaT: no record for this species (not eukaryotic, or not yet sequenced)
Publicly accessible — no request needed.
Origin: hub
36 downloads
First synced: 10/11/2026 · Last updated: 10/11/2026
Source: NCBI GCA_030316585.1 · View at source ↗
Download annotation (GFF3) · Download CDS (FASTA) · Download proteins (FASTA)
Collection: South Africa: Gauteng
Sequencing: IonTorrent · CLC NGS Cell v. 8.5.1 · 372x coverage
Released: 2023-06-21 · Submitted by: University of Pretoria
publiccc0AFDSI-SEQ-2241 Benefit-sharing under CBD Decision 16/2 and national frameworks →Country of origin: ZA · PIC: unknown · MAT: unknown
GoaT: no record for this species (not eukaryotic, or not yet sequenced)
Publicly accessible — no request needed.
Origin: hub
35 downloads
First synced: 10/11/2026 · Last updated: 10/11/2026
Source: NCBI GCA_052622655.1 · View at source ↗
Download annotation (GFF3) · Download CDS (FASTA) · Download proteins (FASTA)
Collection: Morocco: Skhirate
Sequencing: ILLUMINA · SKESA v. 2.2 · 241x coverage
Released: 2025-09-12 · Submitted by: National Center for Biotechnology Information
publiccc0AFDSI-SEQ-2357 Benefit-sharing under CBD Decision 16/2 and national frameworks →Country of origin: MA · PIC: unknown · MAT: unknown
GoaT: no record for this species (not eukaryotic, or not yet sequenced)
Publicly accessible — no request needed.
Origin: hub
33 downloads
First synced: 10/11/2026 · Last updated: 10/11/2026
Source: NCBI GCA_052622755.1 · View at source ↗
Download annotation (GFF3) · Download CDS (FASTA) · Download proteins (FASTA)
Collection: Morocco: Bouznika
Sequencing: ILLUMINA · SKESA v. 2.2 · 222x coverage
Released: 2025-09-12 · Submitted by: National Center for Biotechnology Information
publiccc0AFDSI-SEQ-2359 Benefit-sharing under CBD Decision 16/2 and national frameworks →Country of origin: MA · PIC: unknown · MAT: unknown
GoaT: no record for this species (not eukaryotic, or not yet sequenced)
Publicly accessible — no request needed.
Origin: hub
34 downloads
First synced: 10/11/2026 · Last updated: 10/11/2026
Source: NCBI GCA_052622775.1 · View at source ↗
Download annotation (GFF3) · Download CDS (FASTA) · Download proteins (FASTA)
Collection: Morocco: Tifelt
Sequencing: ILLUMINA · SKESA v. 2.2 · 233x coverage
Released: 2025-09-12 · Submitted by: National Center for Biotechnology Information
publiccc0AFDSI-SEQ-2360 Benefit-sharing under CBD Decision 16/2 and national frameworks →Country of origin: MA · PIC: unknown · MAT: unknown
GoaT: no record for this species (not eukaryotic, or not yet sequenced)
Publicly accessible — no request needed.
Origin: hub
34 downloads
First synced: 10/11/2026 · Last updated: 10/11/2026
Source: NCBI GCA_052622855.1 · View at source ↗
Download annotation (GFF3) · Download CDS (FASTA) · Download proteins (FASTA)
Collection: Morocco: Casablanca
Sequencing: ILLUMINA · SKESA v. 2.2 · 274x coverage
Released: 2025-09-12 · Submitted by: National Center for Biotechnology Information
publiccc0AFDSI-SEQ-2361 Benefit-sharing under CBD Decision 16/2 and national frameworks →Country of origin: MA · PIC: unknown · MAT: unknown
GoaT: no record for this species (not eukaryotic, or not yet sequenced)
Publicly accessible — no request needed.
Origin: hub
34 downloads
First synced: 10/11/2026 · Last updated: 10/11/2026
Source: NCBI GCA_052622875.1 · View at source ↗
Download annotation (GFF3) · Download CDS (FASTA) · Download proteins (FASTA)
Collection: Morocco: Bouznika
Sequencing: ILLUMINA · SKESA v. 2.2 · 223x coverage
Released: 2025-09-12 · Submitted by: National Center for Biotechnology Information
publiccc0AFDSI-SEQ-2362 Benefit-sharing under CBD Decision 16/2 and national frameworks →Country of origin: MA · PIC: unknown · MAT: unknown
GoaT: no record for this species (not eukaryotic, or not yet sequenced)
Publicly accessible — no request needed.
Origin: hub
33 downloads
First synced: 10/11/2026 · Last updated: 10/11/2026
Source: NCBI GCA_052622975.1 · View at source ↗
Download annotation (GFF3) · Download CDS (FASTA) · Download proteins (FASTA)
Collection: Morocco: Casablanca
Sequencing: ILLUMINA · SKESA v. 2.2 · 234x coverage
Released: 2025-09-12 · Submitted by: National Center for Biotechnology Information
publiccc0AFDSI-SEQ-2364 Benefit-sharing under CBD Decision 16/2 and national frameworks →Country of origin: MA · PIC: unknown · MAT: unknown
GoaT: no record for this species (not eukaryotic, or not yet sequenced)
Publicly accessible — no request needed.
Origin: hub
34 downloads
First synced: 10/11/2026 · Last updated: 10/11/2026
Source: NCBI GCA_052622995.1 · View at source ↗
Download annotation (GFF3) · Download CDS (FASTA) · Download proteins (FASTA)
Collection: Morocco: Fes
Sequencing: ILLUMINA · SKESA v. 2.2 · 287x coverage
Released: 2025-09-12 · Submitted by: National Center for Biotechnology Information
publiccc0AFDSI-SEQ-2365 Benefit-sharing under CBD Decision 16/2 and national frameworks →Country of origin: MA · PIC: unknown · MAT: unknown
GoaT: no record for this species (not eukaryotic, or not yet sequenced)
Publicly accessible — no request needed.
Origin: hub
34 downloads
First synced: 10/11/2026 · Last updated: 10/11/2026
Source: NCBI GCA_052623015.1 · View at source ↗
Download annotation (GFF3) · Download CDS (FASTA) · Download proteins (FASTA)
Collection: Morocco: Bouznika
Sequencing: ILLUMINA · SKESA v. 2.2 · 278x coverage
Released: 2025-09-12 · Submitted by: National Center for Biotechnology Information
publiccc0AFDSI-SEQ-2366 Benefit-sharing under CBD Decision 16/2 and national frameworks →Country of origin: MA · PIC: unknown · MAT: unknown
GoaT: no record for this species (not eukaryotic, or not yet sequenced)
Publicly accessible — no request needed.
Origin: hub
34 downloads
First synced: 10/11/2026 · Last updated: 10/11/2026
Source: NCBI GCA_052623095.1 · View at source ↗
Download annotation (GFF3) · Download CDS (FASTA) · Download proteins (FASTA)
Collection: Morocco: Casablanca
Sequencing: ILLUMINA · SKESA v. 2.2 · 263x coverage
Released: 2025-09-12 · Submitted by: National Center for Biotechnology Information
publiccc0AFDSI-SEQ-2367 Benefit-sharing under CBD Decision 16/2 and national frameworks →Country of origin: MA · PIC: unknown · MAT: unknown
GoaT: no record for this species (not eukaryotic, or not yet sequenced)
Publicly accessible — no request needed.
Origin: hub
33 downloads
First synced: 10/11/2026 · Last updated: 10/11/2026
Source: NCBI GCA_052623135.1 · View at source ↗
Download annotation (GFF3) · Download CDS (FASTA) · Download proteins (FASTA)
Collection: Morocco: Safi
Sequencing: ILLUMINA · SKESA v. 2.2 · 277x coverage
Released: 2025-09-12 · Submitted by: National Center for Biotechnology Information
publiccc0AFDSI-SEQ-2369 Benefit-sharing under CBD Decision 16/2 and national frameworks →Country of origin: MA · PIC: unknown · MAT: unknown
GoaT: no record for this species (not eukaryotic, or not yet sequenced)
Publicly accessible — no request needed.
Origin: hub
34 downloads
First synced: 10/11/2026 · Last updated: 10/11/2026
Source: NCBI GCA_052623215.1 · View at source ↗
Download annotation (GFF3) · Download CDS (FASTA) · Download proteins (FASTA)
Collection: Morocco: Temara
Sequencing: ILLUMINA · SKESA v. 2.2 · 347x coverage
Released: 2025-09-12 · Submitted by: National Center for Biotechnology Information
publiccc0AFDSI-SEQ-2371 Benefit-sharing under CBD Decision 16/2 and national frameworks →Country of origin: MA · PIC: unknown · MAT: unknown
GoaT: no record for this species (not eukaryotic, or not yet sequenced)
Publicly accessible — no request needed.
Origin: hub
34 downloads
First synced: 10/11/2026 · Last updated: 10/11/2026
Source: NCBI GCA_052623435.1 · View at source ↗
Download annotation (GFF3) · Download CDS (FASTA) · Download proteins (FASTA)
Collection: Morocco: Fes
Sequencing: ILLUMINA · SKESA v. 2.2 · 323x coverage
Released: 2025-09-12 · Submitted by: National Center for Biotechnology Information
publiccc0AFDSI-SEQ-2372 Benefit-sharing under CBD Decision 16/2 and national frameworks →Country of origin: MA · PIC: unknown · MAT: unknown
GoaT: no record for this species (not eukaryotic, or not yet sequenced)
Publicly accessible — no request needed.
Origin: hub
33 downloads
First synced: 10/11/2026 · Last updated: 10/11/2026
Source: NCBI GCA_052623455.1 · View at source ↗
Download annotation (GFF3) · Download CDS (FASTA) · Download proteins (FASTA)
Collection: Morocco: Temara
Sequencing: ILLUMINA · SKESA v. 2.2 · 300x coverage
Released: 2025-09-12 · Submitted by: National Center for Biotechnology Information
publiccc0AFDSI-SEQ-2373 Benefit-sharing under CBD Decision 16/2 and national frameworks →Country of origin: MA · PIC: unknown · MAT: unknown
GoaT: no record for this species (not eukaryotic, or not yet sequenced)
Publicly accessible — no request needed.
Origin: hub
33 downloads
First synced: 10/11/2026 · Last updated: 10/11/2026
Source: NCBI GCA_052623475.1 · View at source ↗
Download annotation (GFF3) · Download CDS (FASTA) · Download proteins (FASTA)
Collection: Morocco: Bettache
Sequencing: ILLUMINA · SKESA v. 2.2 · 236x coverage
Released: 2025-09-12 · Submitted by: National Center for Biotechnology Information
publiccc0AFDSI-SEQ-2374 Benefit-sharing under CBD Decision 16/2 and national frameworks →Country of origin: MA · PIC: unknown · MAT: unknown
GoaT: no record for this species (not eukaryotic, or not yet sequenced)
Publicly accessible — no request needed.
Origin: hub
33 downloads
First synced: 10/11/2026 · Last updated: 10/11/2026
Source: NCBI GCA_052623575.1 · View at source ↗
Download annotation (GFF3) · Download CDS (FASTA) · Download proteins (FASTA)
Collection: Morocco: Bouznika
Sequencing: ILLUMINA · SKESA v. 2.2 · 265x coverage
Released: 2025-09-12 · Submitted by: National Center for Biotechnology Information
publiccc0AFDSI-SEQ-2376 Benefit-sharing under CBD Decision 16/2 and national frameworks →Country of origin: MA · PIC: unknown · MAT: unknown
GoaT: no record for this species (not eukaryotic, or not yet sequenced)
Publicly accessible — no request needed.
Origin: hub
32 downloads
First synced: 10/11/2026 · Last updated: 10/11/2026
Source: NCBI GCA_052623595.1 · View at source ↗
Download annotation (GFF3) · Download CDS (FASTA) · Download proteins (FASTA)
Collection: Morocco: Safi
Sequencing: ILLUMINA · SKESA v. 2.2 · 253x coverage
Released: 2025-09-12 · Submitted by: National Center for Biotechnology Information
publiccc0AFDSI-SEQ-2377 Benefit-sharing under CBD Decision 16/2 and national frameworks →Country of origin: MA · PIC: unknown · MAT: unknown
GoaT: no record for this species (not eukaryotic, or not yet sequenced)
Publicly accessible — no request needed.
Origin: hub
33 downloads
First synced: 10/11/2026 · Last updated: 10/11/2026
Source: NCBI GCA_052623695.1 · View at source ↗
Download annotation (GFF3) · Download CDS (FASTA) · Download proteins (FASTA)
Collection: Morocco: Temara
Sequencing: ILLUMINA · SKESA v. 2.2 · 290x coverage
Released: 2025-09-12 · Submitted by: National Center for Biotechnology Information
publiccc0AFDSI-SEQ-2378 Benefit-sharing under CBD Decision 16/2 and national frameworks →Country of origin: MA · PIC: unknown · MAT: unknown
GoaT: no record for this species (not eukaryotic, or not yet sequenced)
Publicly accessible — no request needed.
Origin: hub
36 downloads
First synced: 10/11/2026 · Last updated: 10/11/2026
Source: NCBI GCA_052623675.1 · View at source ↗
Download annotation (GFF3) · Download CDS (FASTA) · Download proteins (FASTA)
Collection: Morocco: Skhirat
Sequencing: ILLUMINA · SKESA v. 2.2 · 367x coverage
Released: 2025-09-12 · Submitted by: National Center for Biotechnology Information
publiccc0AFDSI-SEQ-2379 Benefit-sharing under CBD Decision 16/2 and national frameworks →Country of origin: MA · PIC: unknown · MAT: unknown
GoaT: no record for this species (not eukaryotic, or not yet sequenced)
Publicly accessible — no request needed.
Origin: hub
35 downloads
First synced: 10/11/2026 · Last updated: 10/11/2026
Source: NCBI GCA_030316465.1 · View at source ↗
Download annotation (GFF3) · Download CDS (FASTA) · Download proteins (FASTA)
Collection: South Africa: Gauteng
Sequencing: IonTorrent · CLC NGS Cell v. 8.5.1 · 310x coverage
Released: 2023-06-21 · Submitted by: University of Pretoria
publiccc0AFDSI-SEQ-2235 Benefit-sharing under CBD Decision 16/2 and national frameworks →Country of origin: ZA · PIC: unknown · MAT: unknown
GoaT: no record for this species (not eukaryotic, or not yet sequenced)
Publicly accessible — no request needed.
Origin: hub
35 downloads
First synced: 10/11/2026 · Last updated: 10/11/2026
Source: NCBI GCA_030316545.1 · View at source ↗
Download annotation (GFF3) · Download CDS (FASTA) · Download proteins (FASTA)
Collection: South Africa: Gauteng
Sequencing: IonTorrent · CLC NGS Cell v. 8.5.1 · 278x coverage
Released: 2023-06-21 · Submitted by: University of Pretoria
publiccc0AFDSI-SEQ-2239 Benefit-sharing under CBD Decision 16/2 and national frameworks →Country of origin: ZA · PIC: unknown · MAT: unknown
GoaT: no record for this species (not eukaryotic, or not yet sequenced)
Publicly accessible — no request needed.
Origin: hub
33 downloads
First synced: 10/11/2026 · Last updated: 10/11/2026
Source: NCBI GCA_052622715.1 · View at source ↗
Download annotation (GFF3) · Download CDS (FASTA) · Download proteins (FASTA)
Collection: Morocco: Gharb
Sequencing: ILLUMINA · SKESA v. 2.2 · 368x coverage
Released: 2025-09-12 · Submitted by: National Center for Biotechnology Information
publiccc0AFDSI-SEQ-2358 Benefit-sharing under CBD Decision 16/2 and national frameworks →Country of origin: MA · PIC: unknown · MAT: unknown
GoaT: no record for this species (not eukaryotic, or not yet sequenced)
Publicly accessible — no request needed.
Origin: hub
33 downloads
First synced: 10/11/2026 · Last updated: 10/11/2026
Source: NCBI GCA_052622895.1 · View at source ↗
Download annotation (GFF3) · Download CDS (FASTA) · Download proteins (FASTA)
Collection: Morocco: Temara
Sequencing: ILLUMINA · SKESA v. 2.2 · 227x coverage
Released: 2025-09-12 · Submitted by: National Center for Biotechnology Information
publiccc0AFDSI-SEQ-2363 Benefit-sharing under CBD Decision 16/2 and national frameworks →Country of origin: MA · PIC: unknown · MAT: unknown
GoaT: no record for this species (not eukaryotic, or not yet sequenced)
Publicly accessible — no request needed.
Origin: hub
34 downloads
First synced: 10/11/2026 · Last updated: 10/11/2026
Source: NCBI GCA_052623115.1 · View at source ↗
Download annotation (GFF3) · Download CDS (FASTA) · Download proteins (FASTA)
Collection: Morocco: Meknes
Sequencing: ILLUMINA · SKESA v. 2.2 · 326x coverage
Released: 2025-09-12 · Submitted by: National Center for Biotechnology Information
publiccc0AFDSI-SEQ-2368 Benefit-sharing under CBD Decision 16/2 and national frameworks →Country of origin: MA · PIC: unknown · MAT: unknown
GoaT: no record for this species (not eukaryotic, or not yet sequenced)
Publicly accessible — no request needed.
Origin: hub
35 downloads
First synced: 10/11/2026 · Last updated: 10/11/2026
Source: NCBI GCA_052623355.1 · View at source ↗
Download annotation (GFF3) · Download CDS (FASTA) · Download proteins (FASTA)
Collection: Morocco: Tifelt
Sequencing: ILLUMINA · SKESA v. 2.2 · 320x coverage
Released: 2025-09-12 · Submitted by: National Center for Biotechnology Information
publiccc0AFDSI-SEQ-2370 Benefit-sharing under CBD Decision 16/2 and national frameworks →Country of origin: MA · PIC: unknown · MAT: unknown
GoaT: no record for this species (not eukaryotic, or not yet sequenced)
Publicly accessible — no request needed.
Origin: hub
34 downloads
First synced: 10/11/2026 · Last updated: 10/11/2026
Source: NCBI GCA_052623545.1 · View at source ↗
Download annotation (GFF3) · Download CDS (FASTA) · Download proteins (FASTA)
Collection: Morocco: Bouskoura
Sequencing: ILLUMINA · SKESA v. 2.2 · 299x coverage
Released: 2025-09-12 · Submitted by: National Center for Biotechnology Information
publiccc0AFDSI-SEQ-2375 Benefit-sharing under CBD Decision 16/2 and national frameworks →Country of origin: MA · PIC: unknown · MAT: unknown
GoaT: no record for this species (not eukaryotic, or not yet sequenced)
Publicly accessible — no request needed.
No AlphaFold DB proteome found for this species.
PRIDE — project-level reference (metadata only; no per-protein identifications are available via PRIDE's public API)
2DE images and LC-MS/MS of smooth and rough strains of Salmonella Gallinarum (PXD022024) ↗AFDSI-PROJREF-884
ChEMBL rows are compounds active against a protein target from this organism — not confirmed as compounds the species itself produces, unlike ANPDB's.
ChEMBL: CHEMBL292182 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; MIC 100.0 ug.mL-1AFDSI-METABOLOMICS-2551
ChEMBL: CHEMBL3113457 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; MIC 50.0 ug.mL-1AFDSI-METABOLOMICS-2553
ChEMBL: CHEMBL58150 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; MIC 50.0 ug.mL-1AFDSI-METABOLOMICS-2554
ChEMBL: CHEMBL57013 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; MIC 100.0 ug.mL-1AFDSI-METABOLOMICS-2542
ChEMBL: CHEMBL57502 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; MIC 50.0 ug.mL-1AFDSI-METABOLOMICS-2543
ChEMBL: CHEMBL60747 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; MIC 50.0 ug.mL-1AFDSI-METABOLOMICS-2544
ChEMBL: CHEMBL57864 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; MIC 50.0 ug.mL-1AFDSI-METABOLOMICS-2545
ChEMBL: CHEMBL57819 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; MIC 50.0 ug.mL-1AFDSI-METABOLOMICS-2546
ChEMBL: CHEMBL57923 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; MIC 50.0 ug.mL-1
BioImage Archive: (View on source archive ↗)AFDSI-CELL-6200
BioImage Archive: Programmed Cell Death Pathways Coordinate Neutrophil and Macrophage Clearance in Zebrafish and Are Differentially Exploited by Salmonella Typhimurium (View on source archive ↗)AFDSI-CELL-6202
BioImage Archive: (View on source archive ↗)AFDSI-CELL-6199
BioImage Archive: Programmed Cell Death Pathways Coordinate Neutrophil and Macrophage Clearance in Zebrafish and Are Differentially Exploited by Salmonella Typhimurium (View on source archive ↗)AFDSI-CELL-6201
BioImage Archive: Reference raw BioImaging dataset to assess the phenotypic trait diversity of bryophytes within the family Scapaniaceae (View on source archive ↗)AFDSI-CELL-6203
BioImage Archive: Serial-two photon tomography of Salmonella-infected mouse spleen (View on source archive ↗)AFDSI-CELL-6205
BioImage Archive: Reference raw BioImaging dataset to assess the phenotypic trait diversity of bryophytes within the family Scapaniaceae (View on source archive ↗)AFDSI-CELL-6204
BioImage Archive: Serial-two photon tomography of Salmonella-infected mouse spleen (View on source archive ↗)AFDSI-CELL-6206
BioImage Archive: In support of: Immunocompetent Cell Targeting by Food-Additive Titanium Dioxide (View on source archive ↗)AFDSI-CELL-6207
BioImage Archive: Estimating phenotypic traits with morphometry from 16 specimens of thallose liverworts of biological soil crusts collected in Southern Sweden and Germany (View on source archive ↗)AFDSI-CELL-6209
2,196 real GBIF-recorded occurrences across Africa — see this species on GBIF ↗.
This reflects real occurrence records submitted to GBIF, not a comprehensive range map — sampling effort varies significantly by country and region, so an absence here doesn't mean the species isn't present.
A real, citation-backed link between this species and a documented pathogen or wildlife reservoir host — see the Pathogen-Reservoir page (under One Health) for the full pilot list.
Known reservoir host: Agama agama Endemic to Africa
Recorded for the species Salmonella enterica.
Landmark study establishing Agama agama as a natural intestinal host reservoir for Salmonella enterica
Evidence: COLLARD P, MONTEFIORE D. The agama lizard as reservoir of Salmonellae in Nigeria. Nature (1957). https://doi.org/10.1038/179164b0. PMID: 13400133. AFDSI-ASSOC-13
Curated by Ms. Sarah C. Ihenko (University of Cambridge, United Kingdom) · ORCID 0009-0009-8896-7809 . Reviewed by the African DSI DataBank.
Known reservoir host: Sus scrofa Native to Africa
Recorded for the species Salmonella enterica.
Recovered Salmonella enterica from ileocecal lymph nodes (26.0%), carcass surface swabs (16.0%), and pork meat (14.0%) of 100 slaughtered pigs
Evidence: Gomes-Neves E, Antunes P, Tavares A, Themudo P, Cardoso MF, Gärtner F, Costa JM, Peixe L. Salmonella cross-contamination in swine abattoirs in Portugal: Carcasses, meat and meat handlers. Int J Food Microbiol (2012). https://doi.org/10.1016/j.ijfoodmicro.2012.04.015. PMID: 22607810. AFDSI-ASSOC-12
A node's own derived bioinformatics-analysis output (e.g. an SSR/microsatellite discovery archive) run against this species' own genome data — see the Derived Analysis page for the full catalog.
MegaSSR — ssr_discovery
derived from genome record AFDSI-SEQ-2234
File: GCA_030316445.1_megassr_results.tar.gz
Tool version: MegaSSR v3.0.0 (UM6P web pipeline)
Native — captured by Northern-MA-UM6P-8787752738 · View at source ↗
cc_by public Country of origin not recorded: see how benefit-sharing works →
AFDSI-ANALYSIS-20835MegaSSR — ssr_discovery
derived from genome record AFDSI-SEQ-2378
File: GCA_052623695.1_megassr_results.tar.gz
Tool version: MegaSSR v3.0.0 (UM6P patched)
Native — captured by Northern-MA-UM6P-8787752738 · View at source ↗
cc_by public Country of origin not recorded: see how benefit-sharing works →
AFDSI-ANALYSIS-17803There are more related species. Open the species tree to see them all.
ChEMBL: CHEMBL57818 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; MIC 100.0 ug.mL-1AFDSI-METABOLOMICS-2549
ChEMBL: CHEMBL57818 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; MIC 100.0 ug.mL-1AFDSI-METABOLOMICS-2548
ChEMBL: CHEMBL292182 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; MIC 100.0 ug.mL-1AFDSI-METABOLOMICS-2550
ChEMBL: CHEMBL3113457 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; MIC 50.0 ug.mL-1AFDSI-METABOLOMICS-2552
ChEMBL: CHEMBL58150 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; MIC 50.0 ug.mL-1AFDSI-METABOLOMICS-2555
Curated by Ms. Sarah C. Ihenko (University of Cambridge, United Kingdom) · ORCID 0009-0009-8896-7809 . Reviewed by the African DSI DataBank.
Known reservoir host: Gallus gallus domesticus Linnaeus Introduced
Recorded for the species Salmonella enterica.
Isolated 34 Salmonella enterica strains across 8 serotypes from cloacal swabs and farm environments of free-range village chickens (Gallus gallus)
Evidence: Mohammed Jajere S, Hassan L, Zakaria Z, Abu J, Abdul Aziz S. Antibiogram Profiles and Risk Factors for Multidrug Resistance of Salmonella enterica Recovered from Village Chickens (Gallus gallus domesticus Linnaeus) and Other Environmental Sources in the Central and Southern Peninsular Malaysia. Antibiotics (Basel) (2020). https://doi.org/10.3390/antibiotics9100701. PMID: 33076451. AFDSI-ASSOC-11
Curated by Ms. Sarah C. Ihenko (University of Cambridge, United Kingdom) · ORCID 0009-0009-8896-7809 . Reviewed by the African DSI DataBank.
Known reservoir host: Bos taurus Introduced
Recorded for the species Salmonella enterica.
The three most common serotypes were Salmonella enterica subspecies enterica serotype Heidelberg (n = 200), Salmonella enterica subspecies enterica serotype Enteritidis (n = 170) and Salmonella enterica subspecies enterica serotype Typhimurium (n = 146).
Evidence: Gelaw AK, Nthaba P, Matle I. Detection of Salmonella from animal sources in South Africa between 2007 and 2014. J S Afr Vet Assoc (2018). https://doi.org/10.4102/jsava.v89i0.1643. PMID: 30456978. AFDSI-ASSOC-5
Curated by Dr. Ichrak Hayah (Mohammed V University in Rabat, Morocco) · ORCID 0000-0002-0783-9672. Reviewed by the African DSI DataBank.
MegaSSR — ssr_discovery
derived from genome record AFDSI-SEQ-2379
File: GCA_052623675.1_megassr_results.tar.gz
Tool version: MegaSSR v3.0.0 (UM6P patched)
Native — captured by Northern-MA-UM6P-8787752738 · View at source ↗
cc_by public Country of origin not recorded: see how benefit-sharing works →
AFDSI-ANALYSIS-17802MegaSSR — ssr_discovery
derived from genome record AFDSI-SEQ-2377
File: GCA_052623595.1_megassr_results.tar.gz
Tool version: MegaSSR v3.0.0 (UM6P patched)
Native — captured by Northern-MA-UM6P-8787752738 · View at source ↗
cc_by public Country of origin not recorded: see how benefit-sharing works →
AFDSI-ANALYSIS-17801MegaSSR — ssr_discovery
derived from genome record AFDSI-SEQ-2376
File: GCA_052623575.1_megassr_results.tar.gz
Tool version: MegaSSR v3.0.0 (UM6P patched)
Native — captured by Northern-MA-UM6P-8787752738 · View at source ↗
cc_by public Country of origin not recorded: see how benefit-sharing works →
AFDSI-ANALYSIS-17800