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Benefit-sharing from DSI rests on the provider country's national framework. Where it requires bilateral benefit-sharing for DSI, those terms apply. Where it gives effect to the CBD multilateral mechanism, users of its publicly available DSI should share benefits through it: all users non-monetary benefits, as appropriate, and commercial users above set size thresholds also monetary contributions to the Cali Fund. Where it is silent on DSI, the position is not yet settled: check with the country's competent national authority, through the ABS service. Any terms agreed when the genetic resources were accessed still apply. Access and benefit-sharing questions are handled by the ABS service, not by the DataBank. Learn more →
taxon 29382No local or indigenous names recorded yet.
Not yet assessed
Occurrence records: Recorded mostly outside Africa. 30 of 607 GBIF records (5%) are from Africa (checked 10/12/2026). A hint from GBIF and the genomes on this Hub, not an assessment: GBIF includes zoo and travel records.
Species that share this one's nearest groups in NCBI Taxonomy. This is how they're classified, not a phylogeny. See it in the species tree.
Origin: hub
47 downloads
First synced: 10/11/2026 · Last updated: 10/12/2026
Source: NCBI GCF_034042915.1 · View at source ↗
Download annotation (GFF3) · Download CDS (FASTA) · Download proteins (FASTA)
Collection: Kenya:Nairobi
Sequencing: PacBio Sequel II · Flye v. v2.8 · 797x coverage
Released: 2023-12-01 · Submitted by: University of Bern
publiccc0AFDSI-SEQ-6460 Benefit-sharing under CBD Decision 16/2 and national frameworks →Country of origin: KE · PIC: unknown · MAT: unknown
GoaT: no record for this species (not eukaryotic, or not yet sequenced)
Publicly accessible — no request needed.
pdxT — 191 aa
pyrG — 536 aa
pfkA — 322 aa
carB — 1057 aa
coaBC — 400 aa
glmU — 451 aa
rlmN — 364 aa
ribBA — 392 aa
dinB — 356 aa
ftsZ — 388 aa
Origin: hub
61 downloads
First synced: 10/11/2026 · Last updated: 10/12/2026
Source: NCBI GCF_041025755.1 · View at source ↗
Download annotation (GFF3) · Download CDS (FASTA) · Download proteins (FASTA)
Collection: Nigeria
Sequencing: Oxford Nanopore GridION · flye v. 2.9 · 50x coverage
Released: 2024-08-03 · Submitted by: University of Oxford
publiccc0AFDSI-SEQ-6461 Benefit-sharing under CBD Decision 16/2 and national frameworks →Country of origin: NG · PIC: unknown · MAT: unknown
GoaT: no record for this species (not eukaryotic, or not yet sequenced)
Publicly accessible — no request needed.
AlphaFold DB proteome: UP001159200 ↗
PaxDb — real per-protein abundance
AQM41734.1 (29382.BZ166_10270) — abundance 452054AFDSI-PROTEOMICS-1701
rpmG-2 (29382.BZ166_10620) — abundance 77158AFDSI-PROTEOMICS-1702
AQM41034.1 (29382.BZ166_05215) — abundance 45020AFDSI-PROTEOMICS-1703
infA (29382.BZ166_07850) — abundance 43754AFDSI-PROTEOMICS-1704
BZ166_05225 (29382.BZ166_05225) — abundance 26321AFDSI-PROTEOMICS-1705
AQM41036.1 (29382.BZ166_05230) — abundance 26321AFDSI-PROTEOMICS-1706
atpE (29382.BZ166_08365) — abundance 22842AFDSI-PROTEOMICS-1707
AQM41849.1 (29382.BZ166_10965) — abundance 22476AFDSI-PROTEOMICS-1708
rpmF (29382.BZ166_00235) — abundance 18174AFDSI-PROTEOMICS-1709
rpmD (29382.BZ166_07830) — abundance 17205AFDSI-PROTEOMICS-1710
PRIDE — project-level reference (metadata only; no per-protein identifications are available via PRIDE's public API)
Proteomic response of Staphylococcus sp. NIOSBK35 to varying arsenic (III) concentrations (PXD013569) ↗AFDSI-PROJREF-928
ChEMBL rows are compounds active against a protein target from this organism — not confirmed as compounds the species itself produces, unlike ANPDB's.
ChEMBL: CHEMBL601626 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; MIC 32.0 ug.mL-1AFDSI-METABOLOMICS-2729
ChEMBL: CHEMBL603910 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; MIC 2.0 ug.mL-1AFDSI-METABOLOMICS-2730
ChEMBL: CIPROFLOXACIN (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; MIC 0.12 ug.mL-1AFDSI-METABOLOMICS-2732
ChEMBL: CHEMBL4744444 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; MIC 0.12 ug.mL-1AFDSI-METABOLOMICS-2734
ChEMBL: LINEZOLID (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; MIC 0.5 ug.mL-1AFDSI-METABOLOMICS-2736
ChEMBL: CHEMBL603910 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; MIC 2.0 ug.mL-1AFDSI-METABOLOMICS-2731
ChEMBL: CIPROFLOXACIN (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; MIC 0.12 ug.mL-1AFDSI-METABOLOMICS-2733
ChEMBL: CHEMBL4744444 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; MIC 0.12 ug.mL-1AFDSI-METABOLOMICS-2735
ChEMBL: LINEZOLID (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; MIC 0.5 ug.mL-1
MetaboLights: Analysis of 3274 bacterial isolates by rapid evaporative ionisation mass spectrometry (REIMS) (View at source ↗)AFDSI-METABPROF-318
KEGG: KEGG genome-based metabolic profile (scoh) (View at source ↗) — Genome-based pathway inference (KEGG) — reflects which metabolic pathways this species' annotated genes place it in, not experimentally measured metabolite presenceAFDSI-METABPROF-424
pLDDT confidence: 92.9
Auto-synced from AlphaFold DB AF-A0A2T4LUH3-F1 · View at source ↗
publiccc_byAFDSI-STRUCT-20569-V2pLDDT confidence: 92.5
Auto-synced from AlphaFold DB AF-A0A2T4LST6-F1 · View at source ↗
publiccc_byAFDSI-STRUCT-20561-V2pLDDT confidence: 93.9
Auto-synced from AlphaFold DB AF-A0A2T4LQF0-F1 · View at source ↗
publiccc_byAFDSI-STRUCT-20563-V2pLDDT confidence: 79.8
Auto-synced from AlphaFold DB AF-A0A2T4LRZ7-F1 · View at source ↗
publiccc_byAFDSI-STRUCT-20565-V2pLDDT confidence: 96.0
Auto-synced from AlphaFold DB AF-A0A2T4LSU2-F1 · View at source ↗
publiccc_byAFDSI-STRUCT-20567-V2BioImage Archive: Single-cell approach dissecting agr quorum sensing dynamics in Staphylococcus aureus || Timelapse microfluidics bacteria (View on source archive ↗)AFDSI-CELL-7785
BioImage Archive: Systematic identification of bacterial factors driving Staphylococcus aureus intracellular lifestyle in non-professional phagocytes (View on source archive ↗)AFDSI-CELL-7786
BioImage Archive: Simple imaging system for label-free identification of bacterial pathogens in resource-limited settings (View on source archive ↗)AFDSI-CELL-7787
BioImage Archive: Spatial-Spectral Single-Molecule Microscopy Dataset (View on source archive ↗)AFDSI-CELL-7788
BioImage Archive: Single-cell approach dissecting agr quorum sensing dynamics in Staphylococcus aureus || congenic agr strains example image dataset (View on source archive ↗)AFDSI-CELL-7893
BioImage Archive: Image dataset: Testing the mechanical trigger model for Staphylococcus aureus cell-division control with population-level cell-cycle phase data (View on source archive ↗)AFDSI-CELL-7569
BioImage Archive: BAIwatch: Quantitative assessment of biomaterial-associated infection assays by automated image analysis (View on source archive ↗)AFDSI-CELL-7570
BioImage Archive: Simple optical nanomotion method for single-bacterium viability and antibiotic response testing (View on source archive ↗)AFDSI-CELL-7571
BioImage Archive: Holotomographic datasets in OME-Zarr format for compression benchmarking of holotomographic data (View on source archive ↗)AFDSI-CELL-7572
BioImage Archive: Transmission electron microscopy of mast cell degranulation induced by Staphylococcus aureus delta-toxin (View on source archive ↗)AFDSI-CELL-7568
30 real GBIF-recorded occurrences across Africa — see this species on GBIF ↗.
This reflects real occurrence records submitted to GBIF, not a comprehensive range map — sampling effort varies significantly by country and region, so an absence here doesn't mean the species isn't present.
Genomes are often recorded at strain level. These entries belong to this species.
A node's own derived bioinformatics-analysis output (e.g. an SSR/microsatellite discovery archive) run against this species' own genome data — see the Derived Analysis page for the full catalog.
MegaSSR — ssr_discovery
derived from genome record AFDSI-SEQ-6461
File: GCF_041025755.1_megassr_results.tar.gz
Tool version: MegaSSR v3.0.0 (UM6P patched)
Native — captured by Northern-MA-UM6P-8787752738 · View at source ↗
cc_by public Country of origin not recorded: see how benefit-sharing works →
AFDSI-ANALYSIS-20205MegaSSR — ssr_discovery
derived from genome record AFDSI-SEQ-6460
File: GCF_034042915.1_megassr_results.tar.gz
Tool version: MegaSSR v3.0.0 (UM6P patched)
Native — captured by Northern-MA-UM6P-8787752738 · View at source ↗
cc_by public Country of origin not recorded: see how benefit-sharing works →
AFDSI-ANALYSIS-19914There are more related species. Open the species tree to see them all.