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Benefit-sharing from DSI rests on the provider country's national framework. Where it requires bilateral benefit-sharing for DSI, those terms apply. Where it gives effect to the CBD multilateral mechanism, users of its publicly available DSI should share benefits through it: all users non-monetary benefits, as appropriate, and commercial users above set size thresholds also monetary contributions to the Cali Fund. Where it is silent on DSI, the position is not yet settled: check with the country's competent national authority, through the ABS service. Any terms agreed when the genetic resources were accessed still apply. Access and benefit-sharing questions are handled by the ABS service, not by the DataBank. Learn more →
taxon 46127No local or indigenous names recorded yet.
Not yet assessed
Occurrence records: Recorded mostly outside Africa. 1 of 71 GBIF records (1%) are from Africa (checked 10/12/2026). A hint from GBIF and the genomes on this Hub, not an assessment: GBIF includes zoo and travel records.
Species that share this one's nearest groups in NCBI Taxonomy. This is how they're classified, not a phylogeny. See it in the species tree.
Origin: hub
62 downloads
First synced: 10/11/2026 · Last updated: 10/12/2026
Source: NCBI GCF_025558625.1 · View at source ↗
Download annotation (GFF3) · Download CDS (FASTA) · Download proteins (FASTA)
Collection: Kenya:Samburu
Sequencing: PacBio Sequel · Flye v. 2.6 · 771x coverage
Released: 2022-10-04 · Submitted by: University of Bern
publiccc0AFDSI-SEQ-6465 Benefit-sharing under CBD Decision 16/2 and national frameworks →Country of origin: KE · PIC: unknown · MAT: unknown
GoaT: no record for this species (not eukaryotic, or not yet sequenced)
Publicly accessible — no request needed.
ribB — 393 aa
ilvD — 562 aa
pdxT — 188 aa
pyrG — 535 aa
carB — 1057 aa
rlmN — 364 aa
coaBC — 402 aa
pfkA — 323 aa
glmU — 455 aa
qoxB — 662 aa
AlphaFold DB proteome: UP000597038 ↗
KEGG: KEGG genome-based metabolic profile (sfq) (View at source ↗) — Genome-based pathway inference (KEGG) — reflects which metabolic pathways this species' annotated genes place it in, not experimentally measured metabolite presenceAFDSI-METABPROF-428
pLDDT confidence: 94.4
Auto-synced from AlphaFold DB AF-A0A3E0IPN9-F1 · View at source ↗
publiccc_byAFDSI-STRUCT-20964-V2pLDDT confidence: 90.1
Auto-synced from AlphaFold DB AF-A0AAX1RSE7-F1 · View at source ↗
publiccc_byAFDSI-STRUCT-20918-V2pLDDT confidence: 92.9
Auto-synced from AlphaFold DB AF-A0A3E0IQV0-F1 · View at source ↗
publiccc_byAFDSI-STRUCT-20966-V2pLDDT confidence: 96.4
Auto-synced from AlphaFold DB AF-A0A2K3ZFC9-F1 · View at source ↗
publiccc_byAFDSI-STRUCT-20942-V2pLDDT confidence: 96.9
Auto-synced from AlphaFold DB AF-A0A3E0ISZ5-F1 · View at source ↗
publiccc_byAFDSI-STRUCT-20968-V2BioImage Archive: Transmission electron microscopy of mast cell degranulation induced by Staphylococcus aureus delta-toxin (View on source archive ↗)AFDSI-CELL-7334
BioImage Archive: Image dataset: Testing the mechanical trigger model for Staphylococcus aureus cell-division control with population-level cell-cycle phase data (View on source archive ↗)AFDSI-CELL-7335
BioImage Archive: Single-cell approach dissecting agr quorum sensing dynamics in Staphylococcus aureus || congenic agr strains example image dataset (View on source archive ↗)AFDSI-CELL-7336
BioImage Archive: Single-cell approach dissecting agr quorum sensing dynamics in Staphylococcus aureus || Timelapse microfluidics bacteria (View on source archive ↗)AFDSI-CELL-7337
BioImage Archive: BAIwatch: Quantitative assessment of biomaterial-associated infection assays by automated image analysis (View on source archive ↗)AFDSI-CELL-7338
BioImage Archive: Systematic identification of bacterial factors driving Staphylococcus aureus intracellular lifestyle in non-professional phagocytes (View on source archive ↗)AFDSI-CELL-7339
BioImage Archive: Simple imaging system for label-free identification of bacterial pathogens in resource-limited settings (View on source archive ↗)AFDSI-CELL-7340
BioImage Archive: Simple optical nanomotion method for single-bacterium viability and antibiotic response testing (View on source archive ↗)AFDSI-CELL-7580
BioImage Archive: Holotomographic datasets in OME-Zarr format for compression benchmarking of holotomographic data (View on source archive ↗)AFDSI-CELL-7581
BioImage Archive: Parvovirus infection affects host cell nucleolar organization and ribosome biogenesis (View on source archive ↗)AFDSI-CELL-7582
1 real GBIF-recorded occurrence across Africa — see this species on GBIF ↗.
This reflects real occurrence records submitted to GBIF, not a comprehensive range map — sampling effort varies significantly by country and region, so an absence here doesn't mean the species isn't present.
A node's own derived bioinformatics-analysis output (e.g. an SSR/microsatellite discovery archive) run against this species' own genome data — see the Derived Analysis page for the full catalog.
MegaSSR — ssr_discovery
derived from genome record AFDSI-SEQ-6465
File: GCF_025558625.1_megassr_results.tar.gz
Tool version: MegaSSR v3.0.0 (UM6P patched)
Native — captured by Northern-MA-UM6P-8787752738 · View at source ↗
cc_by public Country of origin not recorded: see how benefit-sharing works →
AFDSI-ANALYSIS-19523There are more related species. Open the species tree to see them all.