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Benefit-sharing from DSI rests on the provider country's national framework. Where it requires bilateral benefit-sharing for DSI, those terms apply. Where it gives effect to the CBD multilateral mechanism, users of its publicly available DSI should share benefits through it: all users non-monetary benefits, as appropriate, and commercial users above set size thresholds also monetary contributions to the Cali Fund. Where it is silent on DSI, the position is not yet settled: check with the country's competent national authority, through the ABS service. Any terms agreed when the genetic resources were accessed still apply. Access and benefit-sharing questions are handled by the ABS service, not by the DataBank. Learn more →
taxon 246432No local or indigenous names recorded yet.
Not yet assessed
Occurrence records: Recorded mostly outside Africa. 19 of 487 GBIF records (4%) are from Africa (checked 10/12/2026). A hint from GBIF and the genomes on this Hub, not an assessment: GBIF includes zoo and travel records.
Species that share this one's nearest groups in NCBI Taxonomy. This is how they're classified, not a phylogeny. See it in the species tree.
Origin: hub
66 downloads
First synced: 10/11/2026 · Last updated: 10/12/2026
Source: NCBI GCF_058628415.1 · View at source ↗
Download annotation (GFF3) · Download CDS (FASTA) · Download proteins (FASTA)
Collection: Nigeria
Sequencing: PacBio ONSO · Unicycler v. Version 0.5.1 · 213x coverage
Released: 2026-06-30 · Submitted by: Nigeria
publiccc0AFDSI-SEQ-6464 Benefit-sharing under CBD Decision 16/2 and national frameworks →Country of origin: NG · PIC: unknown · MAT: unknown
GoaT: no record for this species (not eukaryotic, or not yet sequenced)
Publicly accessible — no request needed.
rlmN — 364 aa
carB — 1057 aa
pyrG — 536 aa
pdxT — 191 aa
glmU — 451 aa
pfkA — 322 aa
coaBC — 402 aa
ribBA — 393 aa
prs — 321 aa
ftsZ — 390 aa
AlphaFold DB proteome: UP001152422 ↗
PaxDb — real per-protein abundance
ALM57236.1 (246432.SE1039_14530) — abundance 49514AFDSI-PROTEOMICS-1751
ALM57096.1 (246432.SE1039_13130) — abundance 47913AFDSI-PROTEOMICS-1752
ALM57235.1 (246432.SE1039_14520) — abundance 25466AFDSI-PROTEOMICS-1753
rplL (246432.SE1039_02960) — abundance 24346AFDSI-PROTEOMICS-1754
ALM57024.1 (246432.SE1039_12410) — abundance 19425AFDSI-PROTEOMICS-1755
ALM57961.1 (246432.SE1039_21780) — abundance 18002AFDSI-PROTEOMICS-1756
ALM57415.1 (246432.SE1039_16320) — abundance 15573AFDSI-PROTEOMICS-1757
ALM57655.1 (246432.SE1039_18720) — abundance 14412AFDSI-PROTEOMICS-1758
groS (246432.SE1039_17270) — abundance 13570AFDSI-PROTEOMICS-1759
ALM57357.1 (246432.SE1039_15740) — abundance 11873AFDSI-PROTEOMICS-1760
PRIDE — project-level reference (metadata only; no per-protein identifications are available via PRIDE's public API)
ChEMBL rows are compounds active against a protein target from this organism — not confirmed as compounds the species itself produces, unlike ANPDB's.
ChEMBL: CHEMBL1806970 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; IZ 6.0 mmAFDSI-METABOLOMICS-2802
ChEMBL: CHEMBL1806970 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; IZ 6.0 mmAFDSI-METABOLOMICS-2803
ChEMBL: CHEMBL1806973 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; IZ 11.0 mmAFDSI-METABOLOMICS-2804
ChEMBL: CHEMBL1806973 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; IZ 11.0 mmAFDSI-METABOLOMICS-2805
ChEMBL: CHEMBL1806695 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; IZ 10.0 mmAFDSI-METABOLOMICS-2789
ChEMBL: CHEMBL1806959 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; DIZAFDSI-METABOLOMICS-2791
ChEMBL: CHEMBL1806961 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; DIZAFDSI-METABOLOMICS-2793
ChEMBL: CHEMBL1806962 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; IZ 9.0 mmAFDSI-METABOLOMICS-2795
ChEMBL: CHEMBL1806960 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; DIZ
KEGG: KEGG genome-based metabolic profile (seqo) (View at source ↗) — Genome-based pathway inference (KEGG) — reflects which metabolic pathways this species' annotated genes place it in, not experimentally measured metabolite presenceAFDSI-METABPROF-427
pLDDT confidence: 83.3
Auto-synced from AlphaFold DB AF-A0A9X4L5A0-F1 · View at source ↗
publiccc_byAFDSI-STRUCT-20909-V2pLDDT confidence: 81.3
Auto-synced from AlphaFold DB AF-A0A9X4L3Z3-F1 · View at source ↗
publiccc_byAFDSI-STRUCT-20901-V2pLDDT confidence: 94.7
Auto-synced from AlphaFold DB AF-A0A9X4L5D1-F1 · View at source ↗
publiccc_byAFDSI-STRUCT-20911-V2pLDDT confidence: 93.3
Auto-synced from AlphaFold DB AF-A0A9X4L4F9-F1 · View at source ↗
publiccc_byAFDSI-STRUCT-20905-V2pLDDT confidence: 95.8
Auto-synced from AlphaFold DB AF-A0A9X4L5G8-F1 · View at source ↗
publiccc_byAFDSI-STRUCT-20913-V2BioImage Archive: Transmission electron microscopy of mast cell degranulation induced by Staphylococcus aureus delta-toxin (View on source archive ↗)AFDSI-CELL-7324
BioImage Archive: Image dataset: Testing the mechanical trigger model for Staphylococcus aureus cell-division control with population-level cell-cycle phase data (View on source archive ↗)AFDSI-CELL-7325
BioImage Archive: Single-cell approach dissecting agr quorum sensing dynamics in Staphylococcus aureus || congenic agr strains example image dataset (View on source archive ↗)AFDSI-CELL-7326
BioImage Archive: Single-cell approach dissecting agr quorum sensing dynamics in Staphylococcus aureus || Timelapse microfluidics bacteria (View on source archive ↗)AFDSI-CELL-7327
BioImage Archive: BAIwatch: Quantitative assessment of biomaterial-associated infection assays by automated image analysis (View on source archive ↗)AFDSI-CELL-7328
BioImage Archive: Systematic identification of bacterial factors driving Staphylococcus aureus intracellular lifestyle in non-professional phagocytes (View on source archive ↗)AFDSI-CELL-7329
BioImage Archive: Simple imaging system for label-free identification of bacterial pathogens in resource-limited settings (View on source archive ↗)AFDSI-CELL-7330
BioImage Archive: Simple optical nanomotion method for single-bacterium viability and antibiotic response testing (View on source archive ↗)AFDSI-CELL-7331
BioImage Archive: Holotomographic datasets in OME-Zarr format for compression benchmarking of holotomographic data (View on source archive ↗)AFDSI-CELL-7332
BioImage Archive: Spatial-Spectral Single-Molecule Microscopy Dataset (View on source archive ↗)AFDSI-CELL-7333
9,301 real GBIF-recorded occurrences across Africa — see this species on GBIF ↗.
This reflects real occurrence records submitted to GBIF, not a comprehensive range map — sampling effort varies significantly by country and region, so an absence here doesn't mean the species isn't present.
A node's own derived bioinformatics-analysis output (e.g. an SSR/microsatellite discovery archive) run against this species' own genome data — see the Derived Analysis page for the full catalog.
MegaSSR — ssr_discovery
derived from genome record AFDSI-SEQ-6464
File: GCF_058628415.1_megassr_results.tar.gz
Tool version: MegaSSR v3.0.0 (UM6P patched)
Native — captured by Northern-MA-UM6P-8787752738 · View at source ↗
cc_by public Country of origin not recorded: see how benefit-sharing works →
AFDSI-ANALYSIS-20617There are more related species. Open the species tree to see them all.
ChEMBL: CHEMBL1806963 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; DIZAFDSI-METABOLOMICS-2799
ChEMBL: CHEMBL1806969 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; IZ 12.0 mmAFDSI-METABOLOMICS-2801
ChEMBL: CHEMBL1806695 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; IZ 10.0 mmAFDSI-METABOLOMICS-2788
ChEMBL: CHEMBL1806959 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; DIZAFDSI-METABOLOMICS-2790
ChEMBL: CHEMBL1806961 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; DIZAFDSI-METABOLOMICS-2792
ChEMBL: CHEMBL1806962 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; IZ 9.0 mmAFDSI-METABOLOMICS-2794
ChEMBL: CHEMBL1806960 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; DIZAFDSI-METABOLOMICS-2796
ChEMBL: CHEMBL1806963 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; DIZAFDSI-METABOLOMICS-2798
ChEMBL: CHEMBL1806969 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; IZ 12.0 mmAFDSI-METABOLOMICS-2800
ChEMBL: CHEMBL1806592 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; IZ 11.0 mmAFDSI-METABOLOMICS-2806
ChEMBL: CHEMBL1806592 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; IZ 11.0 mmAFDSI-METABOLOMICS-2807