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Benefit-sharing from DSI rests on the provider country's national framework. Where it requires bilateral benefit-sharing for DSI, those terms apply. Where it gives effect to the CBD multilateral mechanism, users of its publicly available DSI should share benefits through it: all users non-monetary benefits, as appropriate, and commercial users above set size thresholds also monetary contributions to the Cali Fund. Where it is silent on DSI, the position is not yet settled: check with the country's competent national authority, through the ABS service. Any terms agreed when the genetic resources were accessed still apply. Access and benefit-sharing questions are handled by the ABS service, not by the DataBank. Learn more →
taxon 70255Also known as: Tetracoccus soyae
No local or indigenous names recorded yet.
Not yet assessed
Occurrence records: Recorded mostly outside Africa. 2 of 67 GBIF records (3%) are from Africa (checked 10/12/2026). A hint from GBIF and the genomes on this Hub, not an assessment: GBIF includes zoo and travel records.
Species that share this one's nearest groups in NCBI Taxonomy. This is how they're classified, not a phylogeny. See it in the species tree.
Origin: hub
69 downloads
First synced: 10/11/2026 · Last updated: 10/12/2026
Source: NCBI GCF_004209885.1 · View at source ↗
Download annotation (GFF3) · Download CDS (FASTA) · Download proteins (FASTA)
Collection: South Africa: KwaZulu-Natal
Sequencing: Illumina MiSeq · SPAdes v. Sep-18 · 99x coverage
Released: 2019-02-19 · Submitted by: University of KwaZulu-Natal (UKZN), South Africa
publiccc0AFDSI-SEQ-6463 Benefit-sharing under CBD Decision 16/2 and national frameworks →Country of origin: ZA · PIC: unknown · MAT: unknown
GoaT: no record for this species (not eukaryotic, or not yet sequenced)
Publicly accessible — no request needed.
rlmN — 364 aa
ribBA — 393 aa
pfkA — 322 aa
pdxT — 192 aa
carB — 1057 aa
glmU — 454 aa
ilvD — 564 aa
coaBC — 403 aa
pyrG — 539 aa
gatD — 241 aa
AlphaFold DB proteome: UP000595942 ↗
KEGG: KEGG genome-based metabolic profile (scv) (View at source ↗) — Genome-based pathway inference (KEGG) — reflects which metabolic pathways this species' annotated genes place it in, not experimentally measured metabolite presenceAFDSI-METABPROF-425
pLDDT confidence: 96.6
Auto-synced from AlphaFold DB AF-A0A143P7Y7-F1 · View at source ↗
publiccc_byAFDSI-STRUCT-20595-V2pLDDT confidence: 92.6
Auto-synced from AlphaFold DB AF-A0A143PA58-F1 · View at source ↗
publiccc_byAFDSI-STRUCT-20571-V2pLDDT confidence: 93.3
Auto-synced from AlphaFold DB AF-A0A143P7R5-F1 · View at source ↗
publiccc_byAFDSI-STRUCT-20573-V2pLDDT confidence: 95.1
Auto-synced from AlphaFold DB AF-A0A143P7X8-F1 · View at source ↗
publiccc_byAFDSI-STRUCT-20575-V2pLDDT confidence: 94.9
Auto-synced from AlphaFold DB AF-A0A143PBM4-F1 · View at source ↗
publiccc_byAFDSI-STRUCT-20577-V2BioImage Archive: Single-cell approach dissecting agr quorum sensing dynamics in Staphylococcus aureus || congenic agr strains example image dataset (View on source archive ↗)AFDSI-CELL-7789
BioImage Archive: Single-cell approach dissecting agr quorum sensing dynamics in Staphylococcus aureus || Timelapse microfluidics bacteria (View on source archive ↗)AFDSI-CELL-7790
BioImage Archive: BAIwatch: Quantitative assessment of biomaterial-associated infection assays by automated image analysis (View on source archive ↗)AFDSI-CELL-7791
BioImage Archive: Systematic identification of bacterial factors driving Staphylococcus aureus intracellular lifestyle in non-professional phagocytes (View on source archive ↗)AFDSI-CELL-7792
BioImage Archive: Holotomographic datasets in OME-Zarr format for compression benchmarking of holotomographic data (View on source archive ↗)AFDSI-CELL-7793
BioImage Archive: Spatial-Spectral Single-Molecule Microscopy Dataset (View on source archive ↗)AFDSI-CELL-7794
BioImage Archive: Transmission electron microscopy of mast cell degranulation induced by Staphylococcus aureus delta-toxin (View on source archive ↗)AFDSI-CELL-7897
BioImage Archive: Simple imaging system for label-free identification of bacterial pathogens in resource-limited settings (View on source archive ↗)AFDSI-CELL-7898
BioImage Archive: Simple optical nanomotion method for single-bacterium viability and antibiotic response testing (View on source archive ↗)AFDSI-CELL-7899
2 real GBIF-recorded occurrences across Africa — see this species on GBIF ↗.
This reflects real occurrence records submitted to GBIF, not a comprehensive range map — sampling effort varies significantly by country and region, so an absence here doesn't mean the species isn't present.
A node's own derived bioinformatics-analysis output (e.g. an SSR/microsatellite discovery archive) run against this species' own genome data — see the Derived Analysis page for the full catalog.
MegaSSR — ssr_discovery
derived from genome record AFDSI-SEQ-6463
File: GCF_004209885.1_megassr_results.tar.gz
Tool version: MegaSSR v3.0.0 (UM6P patched)
Native — captured by Northern-MA-UM6P-8787752738 · View at source ↗
cc_by public Country of origin not recorded: see how benefit-sharing works →
AFDSI-ANALYSIS-18602There are more related species. Open the species tree to see them all.