Loading…
Loading…
Benefit-sharing from DSI rests on the provider country's national framework. Where it requires bilateral benefit-sharing for DSI, those terms apply. Where it gives effect to the CBD multilateral mechanism, users of its publicly available DSI should share benefits through it: all users non-monetary benefits, as appropriate, and commercial users above set size thresholds also monetary contributions to the Cali Fund. Where it is silent on DSI, the position is not yet settled: check with the country's competent national authority, through the ABS service. Any terms agreed when the genetic resources were accessed still apply. Access and benefit-sharing questions are handled by the ABS service, not by the DataBank. Learn more →
taxon 1290No local or indigenous names recorded yet.
Not yet assessed
Occurrence records: Recorded mostly outside Africa. 19 of 1,340 GBIF records (1%) are from Africa (checked 10/12/2026). A hint from GBIF and the genomes on this Hub, not an assessment: GBIF includes zoo and travel records.
Species that share this one's nearest groups in NCBI Taxonomy. This is how they're classified, not a phylogeny. See it in the species tree.
Origin: hub
68 downloads
First synced: 10/11/2026 · Last updated: 10/12/2026
Source: NCBI GCA_030014025.1 · View at source ↗
Download annotation (GFF3) · Download CDS (FASTA) · Download proteins (FASTA)
Collection: Algeria: Ouargla
Sequencing: Oxford Nanopore GridION · Trycycler; minimap2; medaka v. v0.5.3; v2.20; v1.5.0 · 270x coverage
Released: 2023-05-15 · Submitted by: Universiteit Gent
publiccc0AFDSI-SEQ-6096 Benefit-sharing under CBD Decision 16/2 and national frameworks →Country of origin: DZ · PIC: unknown · MAT: unknown
GoaT: no record for this species (not eukaryotic, or not yet sequenced)
Publicly accessible — no request needed.
coaBC — 402 aa
rlmN — 364 aa
pdxT — 184 aa
pyrG — 535 aa
carB — 1057 aa
glmU — 451 aa
ribBA — 394 aa
pfkA — 322 aa
hemB — 324 aa
protein 16623 — 422 aa
Origin: hub
69 downloads
First synced: 10/11/2026 · Last updated: 10/12/2026
Source: NCBI GCF_025558605.1 · View at source ↗
Download annotation (GFF3) · Download CDS (FASTA) · Download proteins (FASTA)
Collection: Kenya
Sequencing: PacBio Sequel · Flye v. 2.6 · 339x coverage
Released: 2022-10-04 · Submitted by: University of Bern
publiccc0AFDSI-SEQ-6097 Benefit-sharing under CBD Decision 16/2 and national frameworks →Country of origin: KE · PIC: unknown · MAT: unknown
GoaT: no record for this species (not eukaryotic, or not yet sequenced)
Publicly accessible — no request needed.
AlphaFold DB proteome: UP000665944 ↗
ChEMBL rows are compounds active against a protein target from this organism — not confirmed as compounds the species itself produces, unlike ANPDB's.
ChEMBL: CHEMBL2068726 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; MIC 500.0 ug.mL-1AFDSI-METABOLOMICS-2828
ChEMBL: CHEMBL285128 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; MIC 250.0 ug.mL-1AFDSI-METABOLOMICS-2831
ChEMBL: CHEMBL170945 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; MIC 4000.0 ug.mL-1AFDSI-METABOLOMICS-2832
ChEMBL: CHEMBL170915 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; MIC 1000.0 ug.mL-1AFDSI-METABOLOMICS-2833
ChEMBL: CHEMBL2068726 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; MIC 500.0 ug.mL-1AFDSI-METABOLOMICS-2829
ChEMBL: CHEMBL285128 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; MIC 250.0 ug.mL-1AFDSI-METABOLOMICS-2830
ChEMBL: CHEMBL170945 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; MIC 4000.0 ug.mL-1AFDSI-METABOLOMICS-2834
ChEMBL: CHEMBL75599 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; MIC 128.0 ug.mL-1AFDSI-METABOLOMICS-2836
ChEMBL: CHEMBL78318 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; MIC ug.mL-1
MetaboLights: Bacterial profiles analysed by REIMS using Xevo G2-XS (View at source ↗)AFDSI-METABPROF-324
MetaboLights: Analysis of 3274 bacterial isolates by rapid evaporative ionisation mass spectrometry (REIMS) (View at source ↗)AFDSI-METABPROF-325
KEGG: KEGG genome-based metabolic profile (shom) (View at source ↗) — Genome-based pathway inference (KEGG) — reflects which metabolic pathways this species' annotated genes place it in, not experimentally measured metabolite presenceAFDSI-METABPROF-429
pLDDT confidence: 90.6
Auto-synced from AlphaFold DB AF-A0A3S7GWX8-F1 · View at source ↗
publiccc_byAFDSI-STRUCT-18883-V2pLDDT confidence: 84.8
Auto-synced from AlphaFold DB AF-A0A2A1M6F3-F1 · View at source ↗
publiccc_byAFDSI-STRUCT-18859-V2pLDDT confidence: 91.4
Auto-synced from AlphaFold DB AF-A0A3S7GX99-F1 · View at source ↗
publiccc_byAFDSI-STRUCT-18885-V2pLDDT confidence: 94.6
Auto-synced from AlphaFold DB AF-A0A8X8GLV9-F1 · View at source ↗
publiccc_byAFDSI-STRUCT-18847-V2pLDDT confidence: 97.7
Auto-synced from AlphaFold DB AF-A0A3S7GXF1-F1 · View at source ↗
publiccc_byAFDSI-STRUCT-18887-V2BioImage Archive: BAIwatch: Quantitative assessment of biomaterial-associated infection assays by automated image analysis (View on source archive ↗)AFDSI-CELL-7799
BioImage Archive: Simple optical nanomotion method for single-bacterium viability and antibiotic response testing (View on source archive ↗)AFDSI-CELL-7800
BioImage Archive: Holotomographic datasets in OME-Zarr format for compression benchmarking of holotomographic data (View on source archive ↗)AFDSI-CELL-7801
BioImage Archive: Spatial-Spectral Single-Molecule Microscopy Dataset (View on source archive ↗)AFDSI-CELL-7802
BioImage Archive: Transmission electron microscopy of mast cell degranulation induced by Staphylococcus aureus delta-toxin (View on source archive ↗)AFDSI-CELL-7349
BioImage Archive: Image dataset: Testing the mechanical trigger model for Staphylococcus aureus cell-division control with population-level cell-cycle phase data (View on source archive ↗)AFDSI-CELL-7350
BioImage Archive: Single-cell approach dissecting agr quorum sensing dynamics in Staphylococcus aureus || congenic agr strains example image dataset (View on source archive ↗)AFDSI-CELL-7351
BioImage Archive: Single-cell approach dissecting agr quorum sensing dynamics in Staphylococcus aureus || Timelapse microfluidics bacteria (View on source archive ↗)AFDSI-CELL-7352
BioImage Archive: Systematic identification of bacterial factors driving Staphylococcus aureus intracellular lifestyle in non-professional phagocytes (View on source archive ↗)AFDSI-CELL-7353
BioImage Archive: Simple imaging system for label-free identification of bacterial pathogens in resource-limited settings (View on source archive ↗)AFDSI-CELL-7354
19 real GBIF-recorded occurrences across Africa — see this species on GBIF ↗.
This reflects real occurrence records submitted to GBIF, not a comprehensive range map — sampling effort varies significantly by country and region, so an absence here doesn't mean the species isn't present.
A node's own derived bioinformatics-analysis output (e.g. an SSR/microsatellite discovery archive) run against this species' own genome data — see the Derived Analysis page for the full catalog.
MegaSSR — ssr_discovery
derived from genome record AFDSI-SEQ-6097
File: GCF_025558605.1_megassr_results.tar.gz
Tool version: MegaSSR v3.0.0 (UM6P patched)
Native — captured by Northern-MA-UM6P-8787752738 · View at source ↗
cc_by public Country of origin not recorded: see how benefit-sharing works →
AFDSI-ANALYSIS-19522MegaSSR — ssr_discovery
derived from genome record AFDSI-SEQ-6096
File: GCA_030014025.1_megassr_results.tar.gz
Tool version: MegaSSR v3.0.0 (UM6P patched)
Native — captured by Northern-MA-UM6P-8787752738 · View at source ↗
cc_by public Country of origin not recorded: see how benefit-sharing works →
AFDSI-ANALYSIS-16777There are more related species. Open the species tree to see them all.
ChEMBL: CHEMBL172791 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; MIC 500.0 ug.mL-1AFDSI-METABOLOMICS-2823
ChEMBL: PEFLOXACIN (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; MIC 500.0 ug.mL-1AFDSI-METABOLOMICS-2825
ChEMBL: CHEMBL353607 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; MIC 1000.0 ug.mL-1AFDSI-METABOLOMICS-2827
ChEMBL: CHEMBL75599 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; MIC 128.0 ug.mL-1AFDSI-METABOLOMICS-2835
ChEMBL: CHEMBL172791 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; MIC 500.0 ug.mL-1AFDSI-METABOLOMICS-2822
ChEMBL: PEFLOXACIN (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; MIC 500.0 ug.mL-1AFDSI-METABOLOMICS-2824
ChEMBL: CHEMBL353607 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; MIC 1000.0 ug.mL-1AFDSI-METABOLOMICS-2826
ChEMBL: CHEMBL307143 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; MIC 0.25 ug.mL-1AFDSI-METABOLOMICS-2837
ChEMBL: CHEMBL307143 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; MIC 0.25 ug.mL-1AFDSI-METABOLOMICS-2839