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Benefit-sharing from DSI rests on the provider country's national framework. Where it requires bilateral benefit-sharing for DSI, those terms apply. Where it gives effect to the CBD multilateral mechanism, users of its publicly available DSI should share benefits through it: all users non-monetary benefits, as appropriate, and commercial users above set size thresholds also monetary contributions to the Cali Fund. Where it is silent on DSI, the position is not yet settled: check with the country's competent national authority, through the ABS service. Any terms agreed when the genetic resources were accessed still apply. Access and benefit-sharing questions are handled by the ABS service, not by the DataBank. Learn more →
taxon 1642No local or indigenous names recorded yet.
Not yet assessed
Occurrence records: Recorded mostly outside Africa. 45 of 2,086 GBIF records (2%) are from Africa (checked 10/12/2026). A hint from GBIF and the genomes on this Hub, not an assessment: GBIF includes zoo and travel records.
Species that share this one's nearest groups in NCBI Taxonomy. This is how they're classified, not a phylogeny. See it in the species tree.
Origin: hub
36 downloads
First synced: 10/11/2026 · Last updated: 10/12/2026
Source: NCBI GCF_017815755.1 · View at source ↗
Download annotation (GFF3) · Download CDS (FASTA) · Download proteins (FASTA)
Collection: South Africa: Eastern Cape
Sequencing: Illumina MiSeq · SPAdes v. 3.12.0 · 45x coverage
Released: 2021-04-07 · Submitted by: Zoonosis Science Center
publiccc0AFDSI-SEQ-6345 Benefit-sharing under CBD Decision 16/2 and national frameworks →Country of origin: ZA · PIC: unknown · MAT: unknown
GoaT: no record for this species (not eukaryotic, or not yet sequenced)
Publicly accessible — no request needed.
pdxT — 188 aa
glmU — 457 aa
murE — 491 aa
carB — 1070 aa
pyrG — 532 aa
pfkA — 319 aa
coaBC — 399 aa
tilS — 648 aa
rlmN — 367 aa
topB — 713 aa
Origin: hub
39 downloads
First synced: 10/11/2026 · Last updated: 10/12/2026
Source: NCBI GCF_005577055.1 · View at source ↗
Download annotation (GFF3) · Download CDS (FASTA) · Download proteins (FASTA)
Collection: South Africa
Sequencing: Illumina MiSeq · Unicycler v. 0.4.7 · 131x coverage
Released: 2020-06-11 · Submitted by: FDA Center for Food Safety and Applied Nutrition
publiccc0AFDSI-SEQ-6346 Benefit-sharing under CBD Decision 16/2 and national frameworks →Country of origin: ZA · PIC: unknown · MAT: unknown
GoaT: no record for this species (not eukaryotic, or not yet sequenced)
Publicly accessible — no request needed.
Origin: hub
0 downloads
First synced: 11/8/2026 · Last updated: 11/8/2026
Source: NCBI MP519998.1 · View at source ↗
Released: 2020-05-15
publiccc0AFDSI-SEQ-6541 Country of origin not recorded: see how benefit-sharing works →Publicly accessible — no request needed.
AlphaFold DB proteome: UP001214687 ↗
ChEMBL rows are compounds active against a protein target from this organism — not confirmed as compounds the species itself produces, unlike ANPDB's.
ChEMBL: CHEMBL95671 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; Growth inhibition 72.0 %AFDSI-METABOLOMICS-2058
ChEMBL: CHEMBL317038 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; Growth inhibition 93.0 %AFDSI-METABOLOMICS-2059
ChEMBL: CHEMBL70110 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; Growth inhibition 89.0 %AFDSI-METABOLOMICS-2060
ChEMBL: CHEMBL318553 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; Growth inhibition 86.0 %AFDSI-METABOLOMICS-2061
ChEMBL: CHEMBL98297 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; Growth inhibition 90.0 %AFDSI-METABOLOMICS-2062
ChEMBL: CHEMBL318553 (View at source ↗) — Target organism (ChEMBL) — not confirmed as a compound this species produces; Growth inhibition 86.0 %AFDSI-METABOLOMICS-2063
KEGG: KEGG genome-based metabolic profile (lin) (View at source ↗) — Genome-based pathway inference (KEGG) — reflects which metabolic pathways this species' annotated genes place it in, not experimentally measured metabolite presenceAFDSI-METABPROF-378
BioImage Archive: Anisotropic Magnetic Particles with Different Dimensions, Morphologies and Surface Grafting for Magnetic Field-Assisted Biofilm Removal (View on source archive ↗)AFDSI-CELL-4018
BioImage Archive: Anisotropic Magnetic Particles with Different Dimensions, Morphologies and Surface Grafting for Magnetic Field-Assisted Biofilm Removal (View on source archive ↗)AFDSI-CELL-4019
BioImage Archive: Single-cell gene expression patterns of the Toll-like receptor signalling are heritable traits (View on source archive ↗)AFDSI-CELL-4020
BioImage Archive: Holotomographic datasets in OME-Zarr format for compression benchmarking of holotomographic data (View on source archive ↗)AFDSI-CELL-4022
BioImage Archive: Single-cell gene expression patterns of the Toll-like receptor signalling are heritable traits (View on source archive ↗)AFDSI-CELL-4021
BioImage Archive: Holotomographic datasets in OME-Zarr format for compression benchmarking of holotomographic data (View on source archive ↗)AFDSI-CELL-4023
BioImage Archive: Single-molecule imaging and molecular dynamics simulations reveal early activation of the MET receptor in situ (View on source archive ↗)AFDSI-CELL-4024
BioImage Archive: Single-molecule imaging and molecular dynamics simulations reveal early activation of the MET receptor in situ (View on source archive ↗)AFDSI-CELL-4025
45 real GBIF-recorded occurrences across Africa — see this species on GBIF ↗.
This reflects real occurrence records submitted to GBIF, not a comprehensive range map — sampling effort varies significantly by country and region, so an absence here doesn't mean the species isn't present.
A node's own derived bioinformatics-analysis output (e.g. an SSR/microsatellite discovery archive) run against this species' own genome data — see the Derived Analysis page for the full catalog.
MegaSSR — ssr_discovery
derived from genome record AFDSI-SEQ-6345
File: GCF_017815755.1_megassr_results.tar.gz
Tool version: MegaSSR v3.0.0 (UM6P patched)
Native — captured by Northern-MA-UM6P-8787752738 · View at source ↗
cc_by public Country of origin not recorded: see how benefit-sharing works →
AFDSI-ANALYSIS-19124MegaSSR — ssr_discovery
derived from genome record AFDSI-SEQ-6346
File: GCF_005577055.1_megassr_results.tar.gz
Tool version: MegaSSR v3.0.0 (UM6P patched)
Native — captured by Northern-MA-UM6P-8787752738 · View at source ↗
cc_by public Country of origin not recorded: see how benefit-sharing works →
AFDSI-ANALYSIS-18628There are more related species. Open the species tree to see them all.